BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11240
(363 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328724888|ref|XP_001948540.2| PREDICTED: DNA topoisomerase 2-like isoform 1 [Acyrthosiphon pisum]
gi|328724890|ref|XP_003248280.1| PREDICTED: DNA topoisomerase 2-like isoform 2 [Acyrthosiphon pisum]
Length = 1537
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 143/180 (79%), Positives = 158/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF NM+RHRILFKY DD HI MAFSKK+VD RK WLT WM E +R
Sbjct: 605 GLGTSTSKEAKEYFQNMKRHRILFKYEDAGDDEHIEMAFSKKMVDSRKEWLTNWMVESKR 664
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RKE G+ E+YLY K T+ +TY +FVNKEL+LFSNMDNERSI S+ DGLKPGSRKVLFTC+
Sbjct: 665 RKEAGLAEEYLYEKNTRTVTYKDFVNKELVLFSNMDNERSIASVVDGLKPGSRKVLFTCI 724
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+RE+KVAQLAGSVAEHSAYHHGE SLMSTI+NLAQN+VGSNNINLLQPIGQFGT L
Sbjct: 725 KRNDKREIKVAQLAGSVAEHSAYHHGEVSLMSTIVNLAQNYVGSNNINLLQPIGQFGTRL 784
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 99/145 (68%), Positives = 126/145 (86%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEY+TDTT+KFV+TM+P+KL KAE +G+HK FKL ++ ++SMCAFD+ VL K++ T
Sbjct: 946 DYKEYNTDTTIKFVITMNPEKLQKAENEGIHKFFKLHASIGLTSMCAFDKDCVLKKYEAT 1005
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
QIL+EFYAVRL++Y KRK YLEG+LGAEA KLTNQARFIVEKCDGDLRIENRKK EM+
Sbjct: 1006 QQILREFYAVRLDFYGKRKAYLEGMLGAEAAKLTNQARFIVEKCDGDLRIENRKKSEMVK 1065
Query: 339 ELIKRKYDSDPVKSWKMKQNKENAL 363
EL++R Y+SDPVK+WK+ Q++E+ L
Sbjct: 1066 ELVRRGYNSDPVKAWKLIQDRESVL 1090
>gi|242016991|ref|XP_002428978.1| DNA topoisomerase 2-beta, putative [Pediculus humanus corporis]
gi|212513807|gb|EEB16240.1| DNA topoisomerase 2-beta, putative [Pediculus humanus corporis]
Length = 1223
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 136/180 (75%), Positives = 159/180 (88%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF +M+RHRILF Y G +DD I MAFSKK D+RK WLT+WME+C+R
Sbjct: 619 GLGTSTSKEAKEYFQDMKRHRILFNYDGPSDDYCINMAFSKKCADQRKEWLTSWMEDCKR 678
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E G+GE +LY K T A++Y++F+NKEL+LFSN+DNERSIPS+ DGLKPG RKVLFTCL
Sbjct: 679 RRETGLGEAFLYQKNTIAVSYSDFINKELVLFSNLDNERSIPSMVDGLKPGQRKVLFTCL 738
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND++E+KVAQLAGSVAEHSAYHHGE SLM TIINLAQN+VGSNN+NLL PIGQFGT L
Sbjct: 739 KRNDKKEIKVAQLAGSVAEHSAYHHGEASLMGTIINLAQNYVGSNNLNLLLPIGQFGTRL 798
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/145 (64%), Positives = 115/145 (79%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEY+TDTTV+FV+ M P KL K E +GLHKVFKLQ+T++I+SMC FD GVL + +
Sbjct: 961 DYKEYNTDTTVRFVIQMEPSKLQKFEEEGLHKVFKLQSTISINSMCTFDSNGVLKRSEDV 1020
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILKEFY +R+ +Y KRK YLEG+L +EA KL+NQARFI+EKCDG L IEN+KKK MI
Sbjct: 1021 TVILKEFYDLRMLFYVKRKSYLEGMLQSEADKLSNQARFIIEKCDGKLVIENKKKKVMID 1080
Query: 339 ELIKRKYDSDPVKSWKMKQNKENAL 363
EL+K KY+SDPVK+WK +KE AL
Sbjct: 1081 ELVKLKYESDPVKTWKTNIDKEAAL 1105
>gi|1174742|sp|P41516.1|TOP2A_RAT RecName: Full=DNA topoisomerase 2-alpha; AltName: Full=DNA
topoisomerase II, alpha isozyme
gi|587515|emb|CAA86496.1| DNA topoisomerase II [Rattus norvegicus]
Length = 1526
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 140/180 (77%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF+NM+RHRI FKYSG DDA I +AFSKK VD+RK WLT +ME+ R+
Sbjct: 613 GLGTSTSKEAKEYFANMKRHRIQFKYSGPEDDAAISLAFSKKQVDDRKEWLTNFMEDRRQ 672
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 673 RKLLGLPEDYLYGQTTMYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 732
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 733 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 792
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/141 (60%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFV+ M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 954 DYREYHTDTTVKFVIKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1013
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1014 LDILRDFFELRLKYYGLRKEWLLGMLGAESSKLNNQARFILEKIDGKIVIENKPKKELIK 1073
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1074 VLIQRGYDSDPVKAWKEAQQK 1094
>gi|38259192|ref|NP_071519.2| DNA topoisomerase 2-alpha [Rattus norvegicus]
gi|57964|emb|CAA79611.1| DNA topoisomerase II [Rattus norvegicus]
Length = 1526
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 140/180 (77%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF+NM+RHRI FKYSG DDA I +AFSKK VD+RK WLT +ME+ R+
Sbjct: 613 GLGTSTSKEAKEYFANMKRHRIQFKYSGPEDDAAISLAFSKKQVDDRKEWLTNFMEDRRQ 672
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 673 RKLLGLPEDYLYGQTTMYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 732
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 733 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 792
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/141 (60%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFV+ M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 954 DYREYHTDTTVKFVIKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1013
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1014 LDILRDFFELRLKYYGLRKEWLLGMLGAESSKLNNQARFILEKIDGKIVIENKPKKELIK 1073
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1074 VLIQRGYDSDPVKAWKEAQQK 1094
>gi|149054149|gb|EDM05966.1| topoisomerase (DNA) 2 alpha [Rattus norvegicus]
Length = 1528
Score = 296 bits (758), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 140/180 (77%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF+NM+RHRI FKYSG DDA I +AFSKK VD+RK WLT +ME+ R+
Sbjct: 614 GLGTSTSKEAKEYFANMKRHRIQFKYSGPEDDAAISLAFSKKQVDDRKEWLTNFMEDRRQ 673
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 674 RKLLGLPEDYLYGQTTMYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 733
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 734 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 793
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/141 (60%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFV+ M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 955 DYREYHTDTTVKFVIKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1014
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1015 LDILRDFFELRLKYYGLRKEWLLGMLGAESSKLNNQARFILEKIDGKIVIENKPKKELIK 1074
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1075 VLIQRGYDSDPVKAWKEAQQK 1095
>gi|334322751|ref|XP_001369978.2| PREDICTED: DNA topoisomerase 2-alpha [Monodelphis domestica]
Length = 1668
Score = 296 bits (758), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 140/180 (77%), Positives = 156/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYFS+M RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 727 GLGTSTSKEAKEYFSDMSRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTHFMEDRRQ 786
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY K TK +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 787 RKLLGLPEDYLYGKATKHLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 846
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 847 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 906
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/141 (60%), Positives = 108/141 (76%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKF+V M+ +KL +AE GLHKVFKLQT L +SM FD G L K+DT
Sbjct: 1068 DYREYHTDTTVKFIVKMTEEKLAQAEHAGLHKVFKLQTNLTCNSMVLFDHVGCLKKYDTA 1127
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK +G + IEN+ KKE+I
Sbjct: 1128 LDILRDFFDLRLKYYGLRKEWLTGMLGAESAKLNNQARFILEKIEGKIVIENKPKKELIK 1187
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1188 VLIQRGYDSDPVKAWKEAQQK 1208
>gi|405962935|gb|EKC28563.1| DNA topoisomerase 2-beta [Crassostrea gigas]
Length = 1665
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 137/180 (76%), Positives = 159/180 (88%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYFS+MERH+I FKY+G DDA I +AFSKK ++ERK WLT+WME+ +R
Sbjct: 613 GLGTSTSKEAKEYFSDMERHKIPFKYTGAEDDAAINLAFSKKKIEERKEWLTSWMEDRKR 672
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R EMG+ E++LY K TKAITY +F+N+ELIL+SNMDN RSIPS+ DGLKPG RKVLFTCL
Sbjct: 673 RSEMGLPENFLYGKGTKAITYNDFINRELILYSNMDNTRSIPSMVDGLKPGQRKVLFTCL 732
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +E+KVAQLAGSVAE SAYHHGE SLM+TIINLAQNFVGSNN+N+LQPIGQFGT L
Sbjct: 733 KRNLTKELKVAQLAGSVAEMSAYHHGEASLMNTIINLAQNFVGSNNLNILQPIGQFGTRL 792
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 78/141 (55%), Positives = 105/141 (74%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D+KEYHTD+TVKFVV M+P+KL AE GLHKVFKLQ+ ++ ++M FD G + +++
Sbjct: 954 DFKEYHTDSTVKFVVKMTPEKLAAAEEQGLHKVFKLQSNISTNTMVLFDHNGCIRRYEDI 1013
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+L+E++ VRL Y KRKDY+EG+L AEA +L N ARFI+EK DG + IEN+ KKE+I
Sbjct: 1014 TDVLREYFDVRLSLYQKRKDYMEGLLTAEANRLENIARFIMEKIDGLITIENKPKKELIQ 1073
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
L++R YDSDP+K WK Q K
Sbjct: 1074 MLVRRGYDSDPLKRWKELQAK 1094
>gi|395532490|ref|XP_003768303.1| PREDICTED: DNA topoisomerase 2-alpha isoform 1 [Sarcophilus
harrisii]
Length = 1561
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 140/180 (77%), Positives = 156/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYFS+M RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 620 GLGTSTSKEAKEYFSDMSRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTHFMEDRRQ 679
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY K TK +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 680 RKLLGLPEDYLYGKATKHLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 739
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 740 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 799
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/141 (60%), Positives = 108/141 (76%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKF+V M+ +KL +AE GLHKVFKLQT L +SM FD G L K+DT
Sbjct: 961 DYREYHTDTTVKFIVKMTEEKLAQAEHAGLHKVFKLQTNLTCNSMVLFDHVGCLKKYDTA 1020
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILK+F+ +RL+YY RK++L G+LGAE+ +L NQARFI+EK +G + IEN+ KKE+I
Sbjct: 1021 LDILKDFFDLRLKYYGLRKEWLTGMLGAESARLNNQARFILEKIEGKIVIENKPKKELIK 1080
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1081 VLIQRGYDSDPVKAWKEAQQK 1101
>gi|395532492|ref|XP_003768304.1| PREDICTED: DNA topoisomerase 2-alpha isoform 2 [Sarcophilus
harrisii]
Length = 1550
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 140/180 (77%), Positives = 156/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYFS+M RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 620 GLGTSTSKEAKEYFSDMSRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTHFMEDRRQ 679
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY K TK +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 680 RKLLGLPEDYLYGKATKHLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 739
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 740 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 799
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/141 (60%), Positives = 108/141 (76%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKF+V M+ +KL +AE GLHKVFKLQT L +SM FD G L K+DT
Sbjct: 961 DYREYHTDTTVKFIVKMTEEKLAQAEHAGLHKVFKLQTNLTCNSMVLFDHVGCLKKYDTA 1020
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILK+F+ +RL+YY RK++L G+LGAE+ +L NQARFI+EK +G + IEN+ KKE+I
Sbjct: 1021 LDILKDFFDLRLKYYGLRKEWLTGMLGAESARLNNQARFILEKIEGKIVIENKPKKELIK 1080
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1081 VLIQRGYDSDPVKAWKEAQQK 1101
>gi|26328987|dbj|BAC28232.1| unnamed protein product [Mus musculus]
Length = 1028
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK VD+RK WLT +ME+ R+
Sbjct: 115 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQVDDRKEWLTNFMEDRRQ 174
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY ++T +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 175 RKLLGLPEDYLYGQSTSYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 234
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 235 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 294
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/141 (60%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFV+ M+ +KL +AE GLHKVFKLQ++L +SM FD G L K+DT
Sbjct: 456 DYREYHTDTTVKFVIKMTEEKLAEAERVGLHKVFKLQSSLTCNSMVLFDHVGCLKKYDTV 515
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 516 LDILRDFFELRLKYYGLRKEWLLGMLGAESSKLNNQARFILEKIDGKIVIENKPKKELIK 575
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 576 VLIQRGYDSDPVKAWKEAQQK 596
>gi|73966009|ref|XP_537646.2| PREDICTED: DNA topoisomerase 2-alpha isoform 1 [Canis lupus
familiaris]
Length = 1532
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 139/180 (77%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF+NM+RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 615 GLGTSTSKEAKEYFANMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTHFMEDRRQ 674
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 675 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 734
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 735 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 794
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 956 DYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1015
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1016 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1075
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1076 VLIQRGYDSDPVKAWKEAQQK 1096
>gi|112983266|ref|NP_001037009.1| DNA topoisomerase 2 [Bombyx mori]
gi|6094494|sp|O16140.1|TOP2_BOMMO RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
II; Short=TOPOII
gi|2338552|gb|AAB67168.1| topoisomerase II [Bombyx mori]
Length = 1547
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 137/180 (76%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF NM+RHRI FKYSG DD HI +AFSKK D+RK WLT M+E +R
Sbjct: 623 GLGTSTSKEAKEYFQNMDRHRIRFKYSGPTDDHHIELAFSKKGADQRKEWLTNHMDEVKR 682
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RKE+G+ E YLYTK TK +TY++FVN EL+LFSN DN RSIPS+ DGLKPG RKV+FTC+
Sbjct: 683 RKEIGLSERYLYTKETKTVTYSDFVNLELVLFSNGDNVRSIPSMIDGLKPGQRKVIFTCI 742
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAEHSAYHHGEQSL TI+NLAQN+VGSNNINLL+P GQFGT L
Sbjct: 743 KRNDKREVKVAQLAGSVAEHSAYHHGEQSLAMTIVNLAQNYVGSNNINLLEPRGQFGTRL 802
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/146 (55%), Positives = 111/146 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
++Y+EY+TDTTV+FVV++ P KL + E +G+HKVFKLQTT++++ M AFD L K+D
Sbjct: 961 SEYREYNTDTTVRFVVSLLPGKLSEIEAEGIHKVFKLQTTISMTCMNAFDYNCCLEKYDK 1020
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
+IL+EFY +R++YY +RKDYLEG L AEA KL+NQARFI++KCD L IEN+K+K M+
Sbjct: 1021 VEEILREFYDLRVKYYVRRKDYLEGQLQAEADKLSNQARFILKKCDKGLVIENKKRKAMV 1080
Query: 338 AELIKRKYDSDPVKSWKMKQNKENAL 363
ELIKR Y DP+ WK + +K L
Sbjct: 1081 EELIKRGYAPDPIADWKKRASKIQGL 1106
>gi|391341933|ref|XP_003745280.1| PREDICTED: DNA topoisomerase 2-alpha-like [Metaseiulus
occidentalis]
Length = 1411
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 140/180 (77%), Positives = 159/180 (88%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYFSNM RH I FKY+G DD+ I +AFSKK+V+ERKTWLT M+E +
Sbjct: 593 GLGTSTAKEAKEYFSNMGRHLIAFKYTGAEDDSSITLAFSKKMVEERKTWLTNGMKERKD 652
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E+G+ E YLY K TK ++Y++FV+KELILFSNMDNERSIPSL DGLKPG RKVLFTCL
Sbjct: 653 RRELGMPEIYLYNKDTKKVSYSDFVHKELILFSNMDNERSIPSLVDGLKPGQRKVLFTCL 712
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGEQSLM TIINLAQ+FVGSNNINLLQPIGQFGT L
Sbjct: 713 KRNDKREVKVAQLAGSVAEMSSYHHGEQSLMMTIINLAQDFVGSNNINLLQPIGQFGTRL 772
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/142 (55%), Positives = 104/142 (73%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EY+TDT V FVV M ++ KA+ +GLHKVFKLQTTLA + M FD G + + +
Sbjct: 935 DYREYNTDTKVNFVVQMDSAQMAKAQSEGLHKVFKLQTTLATTCMVLFDAAGCIRFYQSP 994
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL+EF+ VRL+ Y +R+++L G+LGAEA KLTNQARFIVEKC+ +R+EN+KKK MI
Sbjct: 995 EEILEEFFTVRLDGYVRRRNFLLGMLGAEACKLTNQARFIVEKCEDKIRVENKKKKVMIE 1054
Query: 339 ELIKRKYDSDPVKSWKMKQNKE 360
L++R YD DPV WK Q E
Sbjct: 1055 LLVERGYDPDPVLRWKESQKSE 1076
>gi|321457974|gb|EFX69050.1| hypothetical protein DAPPUDRAFT_329527 [Daphnia pulex]
Length = 1572
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 136/180 (75%), Positives = 156/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS+EAK YFS+M+RHRILF + GD DD I MAFSKK V++RK WLT+WMEEC+R
Sbjct: 630 GLGTSTSQEAKGYFSDMQRHRILFHHDGDQDDYAILMAFSKKHVEQRKEWLTSWMEECKR 689
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E+G+ E YLY K TK ++Y +FVNKEL+LFSNMDNERSIPSL DG KPG RKVLFTC+
Sbjct: 690 RRELGLPELYLYEKDTKRVSYRDFVNKELVLFSNMDNERSIPSLMDGFKPGQRKVLFTCI 749
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND++E+KVAQLAGSVAEHSAYHHGE SLM TII LAQ+FVGSNNINLL P GQFGT L
Sbjct: 750 KRNDKKEIKVAQLAGSVAEHSAYHHGEASLMGTIIGLAQDFVGSNNINLLLPNGQFGTRL 809
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 89/163 (54%), Positives = 113/163 (69%)
Query: 195 STNLSGAVVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKL 254
+ N +V+ L GS DYKEYHTDTTV+F+VTMS +K+ +AE +GLHK FKL
Sbjct: 947 TQNYKESVMETLLHGSEKIPPLITDYKEYHTDTTVRFIVTMSEEKMQQAEAEGLHKAFKL 1006
Query: 255 QTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQ 314
QTT +++SM +D G L +DT ILKEF+ VRL YY KRKDYL GVL AE+ +L+NQ
Sbjct: 1007 QTTHSLTSMVLYDSNGCLKMYDTVEDILKEFFTVRLGYYGKRKDYLSGVLQAESQRLSNQ 1066
Query: 315 ARFIVEKCDGDLRIENRKKKEMIAELIKRKYDSDPVKSWKMKQ 357
ARFI EKCD L +EN+K K ++ EL +R YD DPV+ WK Q
Sbjct: 1067 ARFICEKCDNVLIVENKKAKVLVEELRRRNYDPDPVRIWKKNQ 1109
>gi|312376011|gb|EFR23229.1| hypothetical protein AND_13286 [Anopheles darlingi]
Length = 1530
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 141/180 (78%), Positives = 153/180 (85%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF NMERHRILF+Y + DD I MAFSKK VD+RK WLT MEECR
Sbjct: 618 GLGTSTSKEAKEYFQNMERHRILFRYEDNGDDDAIMMAFSKKAVDQRKDWLTAHMEECRH 677
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK++G+ E YLYTKTTKAI+Y +FVN EL+LFSN DN RSIP + DGLKPG RKV+FTC
Sbjct: 678 RKQVGLQERYLYTKTTKAISYKDFVNLELVLFSNSDNVRSIPCMLDGLKPGQRKVMFTCF 737
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQSL STIINLAQNFVGSNNINLL P GQFGT L
Sbjct: 738 KRNDKREVKVAQLAGSVAEMSAYHHGEQSLCSTIINLAQNFVGSNNINLLYPGGQFGTRL 797
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 109/157 (69%), Gaps = 2/157 (1%)
Query: 202 VVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLHK--AEMDGLHKVFKLQTTLA 259
V+ L GS + +DYKEY+TDTTV+FVV+ P + K AE G H++FKL ++++
Sbjct: 942 VLEPLLHGSDKQKAVISDYKEYNTDTTVRFVVSFLPGEYAKLYAEEGGFHRLFKLTSSIS 1001
Query: 260 ISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIV 319
SSM AFD L ++D N I ++FY +RLEYY KR++YL G+L AEA ++++ARFI+
Sbjct: 1002 TSSMNAFDDKNYLKRYDHANSIFQDFYTIRLEYYGKRREYLLGMLQAEADSMSDKARFIM 1061
Query: 320 EKCDGDLRIENRKKKEMIAELIKRKYDSDPVKSWKMK 356
EKC G L +EN+K+K +I E+IKR Y DP+K WK +
Sbjct: 1062 EKCSGQLTVENKKRKALIEEMIKRGYRPDPIKEWKRR 1098
>gi|397522864|ref|XP_003831468.1| PREDICTED: DNA topoisomerase 2-alpha [Pan paniscus]
Length = 1531
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 615 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTNFMEDRRQ 674
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 675 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 734
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 735 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 794
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 956 DYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1015
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1016 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1075
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1076 VLIQRGYDSDPVKAWKEAQQK 1096
>gi|332847785|ref|XP_003315524.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-alpha [Pan
troglodytes]
Length = 1500
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 584 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTNFMEDRRQ 643
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 644 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 703
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 704 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 763
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 925 DYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 984
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 985 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1044
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1045 VLIQRGYDSDPVKAWKEAQQK 1065
>gi|2909393|emb|CAA76313.1| DNA topoisomerase II alpha [Cricetulus longicaudatus]
Length = 1526
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 139/180 (77%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK VD+RK WLT +ME+ R+
Sbjct: 614 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQVDDRKEWLTHFMEDRRQ 673
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 674 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 733
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 734 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 793
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFV+ M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 955 DYREYHTDTTVKFVIKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1014
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILK+F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1015 LDILKDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1074
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1075 VLIQRGYDSDPVKAWKEAQQK 1095
>gi|402900108|ref|XP_003913022.1| PREDICTED: DNA topoisomerase 2-alpha isoform 2 [Papio anubis]
Length = 1526
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 610 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTNFMEDRRQ 669
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 670 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 729
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 730 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 789
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 951 DYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1010
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1011 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1070
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1071 VLIQRGYDSDPVKAWKEAQQK 1091
>gi|297272911|ref|XP_002808175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-alpha-like
[Macaca mulatta]
Length = 1481
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 582 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTNFMEDRRQ 641
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 642 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 701
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 702 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 761
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 923 DYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 982
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 983 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1042
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1043 VLIQRGYDSDPVKAWKEAQQK 1063
>gi|350537403|ref|NP_001233667.1| DNA topoisomerase 2-alpha [Cricetulus griseus]
gi|1174741|sp|P41515.1|TOP2A_CRIGR RecName: Full=DNA topoisomerase 2-alpha; AltName: Full=DNA
topoisomerase II, alpha isozyme
gi|191218|gb|AAA37023.1| DNA topoisomerase II [Cricetulus griseus]
gi|344256934|gb|EGW13038.1| DNA topoisomerase 2-alpha [Cricetulus griseus]
Length = 1526
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 139/180 (77%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK VD+RK WLT +ME+ R+
Sbjct: 614 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQVDDRKEWLTHFMEDRRQ 673
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 674 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 733
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 734 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 793
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFV+ M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 955 DYREYHTDTTVKFVIKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1014
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILK+F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1015 LDILKDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1074
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1075 VLIQRGYDSDPVKAWKEAQQK 1095
>gi|19913406|ref|NP_001058.2| DNA topoisomerase 2-alpha [Homo sapiens]
gi|13959709|sp|P11388.3|TOP2A_HUMAN RecName: Full=DNA topoisomerase 2-alpha; AltName: Full=DNA
topoisomerase II, alpha isozyme
gi|3869316|gb|AAC77388.1| topoisomerase II alpha [Homo sapiens]
gi|119581067|gb|EAW60663.1| topoisomerase (DNA) II alpha 170kDa, isoform CRA_c [Homo sapiens]
gi|187954517|gb|AAI40792.1| TOP2A protein [Homo sapiens]
gi|306921645|dbj|BAJ17902.1| topoisomerase (DNA) II alpha 170kDa [synthetic construct]
Length = 1531
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 615 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTNFMEDRRQ 674
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 675 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 734
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 735 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 794
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 956 DYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1015
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1016 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1075
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1076 VLIQRGYDSDPVKAWKEAQQK 1096
>gi|410214808|gb|JAA04623.1| topoisomerase (DNA) II alpha 170kDa [Pan troglodytes]
gi|410253008|gb|JAA14471.1| topoisomerase (DNA) II alpha 170kDa [Pan troglodytes]
gi|410293406|gb|JAA25303.1| topoisomerase (DNA) II alpha 170kDa [Pan troglodytes]
Length = 1531
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 615 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTNFMEDRRQ 674
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 675 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 734
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 735 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 794
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 956 DYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1015
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1016 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1075
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1076 VLIQRGYDSDPVKAWKEAQQK 1096
>gi|292830|gb|AAA61209.1| DNA topoisomerase II (EC 5.99.1.3) [Homo sapiens]
Length = 1531
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 615 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTNFMEDRRQ 674
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 675 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 734
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 735 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 794
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 956 DYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1015
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1016 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1075
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1076 VLIQRGYDSDPVKAWKEAQQK 1096
>gi|153945749|ref|NP_035753.2| DNA topoisomerase 2-alpha [Mus musculus]
gi|363548478|sp|Q01320.2|TOP2A_MOUSE RecName: Full=DNA topoisomerase 2-alpha; AltName: Full=DNA
topoisomerase II, alpha isozyme
gi|148684229|gb|EDL16176.1| topoisomerase (DNA) II alpha [Mus musculus]
Length = 1528
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK VD+RK WLT +ME+ R+
Sbjct: 614 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQVDDRKEWLTNFMEDRRQ 673
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY ++T +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 674 RKLLGLPEDYLYGQSTSYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 733
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 734 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 793
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/141 (60%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFV+ M+ +KL +AE GLHKVFKLQ++L +SM FD G L K+DT
Sbjct: 955 DYREYHTDTTVKFVIKMTEEKLAEAERVGLHKVFKLQSSLTCNSMVLFDHVGCLKKYDTV 1014
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1015 LDILRDFFELRLKYYGLRKEWLLGMLGAESSKLNNQARFILEKIDGKIVIENKPKKELIK 1074
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1075 VLIQRGYDSDPVKAWKEAQQK 1095
>gi|4218221|emb|CAA09762.1| DNA topoisomerase (ATP-hydrolysing) [Homo sapiens]
Length = 1531
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 615 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTNFMEDRRQ 674
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 675 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 734
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 735 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 794
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 86/141 (60%), Positives = 108/141 (76%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 956 DYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1015
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++ + +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1016 LDILRDLFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1075
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1076 VLIQRGYDSDPVKAWKEAQQK 1096
>gi|351698720|gb|EHB01639.1| DNA topoisomerase 2-alpha, partial [Heterocephalus glaber]
Length = 1491
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 579 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKDWLTHFMEDRRQ 638
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 639 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 698
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 699 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 758
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 920 DYREYHTDTTVKFVVKMTEEKLAEAERAGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTA 979
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 980 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1039
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1040 VLIQRGYDSDPVKAWKEAQQK 1060
>gi|291234700|ref|XP_002737286.1| PREDICTED: DNA topoisomerase II, beta isozyme-like [Saccoglossus
kowalevskii]
Length = 1649
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 154/180 (85%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYFS+M RHRI FKY G DDA I +AFSKK DERK WLT W+ E ++
Sbjct: 630 GLGTSTNKEAKEYFSDMVRHRIPFKYVGPQDDAAITLAFSKKKTDERKEWLTDWLGERKK 689
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E G+ + YLY K T+ I+Y +FVNKEL+LFSNMDNERSIPS+ DGLKPG RKVLFTC
Sbjct: 690 RREDGLSDLYLYNKDTRYISYNDFVNKELVLFSNMDNERSIPSMVDGLKPGQRKVLFTCF 749
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAEHSAYHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 750 KRNDKREVKVAQLAGSVAEHSAYHHGEASLMGTIINLAQNFVGSNNLNLLQPIGQFGTRL 809
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 82/143 (57%), Positives = 110/143 (76%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTDTTVK VV MS +KL KAE GLHKVFKLQ T+++++ FD +G + K+D
Sbjct: 971 DYKEYHTDTTVKIVVKMSDEKLLKAEEQGLHKVFKLQNTISVTNSVLFDSHGCIKKYDDI 1030
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ILKEF+ +RLE Y RK+YLEG+L AE+ KL NQARFI+EK + + IEN+ K+++I+
Sbjct: 1031 MEILKEFFELRLERYRIRKEYLEGLLAAESNKLDNQARFILEKIENKIVIENKSKRDLIS 1090
Query: 339 ELIKRKYDSDPVKSWKMKQNKEN 361
L++R YDSDP+K+WK QN+ N
Sbjct: 1091 MLVQRGYDSDPIKAWKESQNRNN 1113
>gi|383409263|gb|AFH27845.1| DNA topoisomerase 2-alpha [Macaca mulatta]
Length = 1531
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 615 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTNFMEDRRQ 674
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 675 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 734
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 735 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 794
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 956 DYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1015
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1016 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1075
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1076 VLIQRGYDSDPVKAWKEAQQK 1096
>gi|297701283|ref|XP_002827646.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-alpha [Pongo
abelii]
Length = 1532
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 616 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTNFMEDRRQ 675
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 676 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 735
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 736 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 795
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 957 DYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1016
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1017 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1076
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1077 VLIQRGYDSDPVKAWKEAQQK 1097
>gi|431890663|gb|ELK01542.1| DNA topoisomerase 2-alpha [Pteropus alecto]
Length = 1484
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 568 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTHFMEDRRQ 627
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 628 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 687
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 688 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 747
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 909 DYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTA 968
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 969 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1028
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1029 VLIQRGYDSDPVKAWKEAQQK 1049
>gi|402900106|ref|XP_003913021.1| PREDICTED: DNA topoisomerase 2-alpha isoform 1 [Papio anubis]
Length = 1540
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 624 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTNFMEDRRQ 683
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 684 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 743
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 744 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 803
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 965 DYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1024
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1025 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1084
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1085 VLIQRGYDSDPVKAWKEAQQK 1105
>gi|355725610|gb|AES08611.1| topoisomerase II alpha 170kDa [Mustela putorius furo]
Length = 1237
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 319 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTHFMEDRRQ 378
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 379 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 438
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 439 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 498
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 660 DYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 719
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 720 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 779
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 780 VLIQRGYDSDPVKAWKEAQQK 800
>gi|444714020|gb|ELW54908.1| DNA topoisomerase 2-alpha [Tupaia chinensis]
Length = 1392
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 508 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTHFMEDRRQ 567
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 568 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 627
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 628 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 687
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 88/141 (62%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 849 DYKEYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 908
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 909 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 968
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 969 VLIQRGYDSDPVKAWKEAQQK 989
>gi|47523094|ref|NP_999049.1| DNA topoisomerase 2-alpha [Sus scrofa]
gi|6094498|sp|O46374.1|TOP2A_PIG RecName: Full=DNA topoisomerase 2-alpha; AltName: Full=DNA
topoisomerase II, alpha isozyme
gi|2668414|dbj|BAA23778.1| topoisomersae II [Sus scrofa]
Length = 1533
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 615 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTHFMEDRRQ 674
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 675 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 734
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 735 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 794
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 956 DYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1015
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1016 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1075
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1076 VLIQRGYDSDPVKAWKEAQQK 1096
>gi|410981039|ref|XP_003996880.1| PREDICTED: DNA topoisomerase 2-alpha [Felis catus]
Length = 1534
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 615 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTHFMEDRRQ 674
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 675 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 734
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 735 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 794
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 956 DYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1015
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1016 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1075
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1076 VLIQRGYDSDPVKAWKEAQQK 1096
>gi|119581065|gb|EAW60661.1| topoisomerase (DNA) II alpha 170kDa, isoform CRA_a [Homo sapiens]
Length = 837
Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 114 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTNFMEDRRQ 173
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 174 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 233
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 234 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 293
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 455 DYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 514
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 515 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 574
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 575 VLIQRGYDSDPVKAWKEAQQK 595
>gi|301779127|ref|XP_002924981.1| PREDICTED: DNA topoisomerase 2-alpha-like [Ailuropoda melanoleuca]
Length = 1533
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 615 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTHFMEDRRQ 674
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 675 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 734
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 735 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 794
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 956 DYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1015
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1016 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1075
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1076 VLIQRGYDSDPVKAWKEAQQK 1096
>gi|426348387|ref|XP_004041818.1| PREDICTED: DNA topoisomerase 2-alpha [Gorilla gorilla gorilla]
Length = 1531
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 137/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI F+YSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 615 GLGTSTSKEAKEYFADMKRHRIQFRYSGPEDDAAISLAFSKKQIDDRKEWLTNFMEDRRQ 674
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 675 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 734
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 735 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 794
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 956 DYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1015
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1016 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1075
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1076 VLIQRGYDSDPVKAWKEAQQK 1096
>gi|441661001|ref|XP_003278314.2| PREDICTED: DNA topoisomerase 2-alpha [Nomascus leucogenys]
Length = 1499
Score = 293 bits (750), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 156/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK D+RK WLT +ME+ R+
Sbjct: 615 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQTDDRKEWLTNFMEDRRQ 674
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 675 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 734
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 735 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 794
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 924 DYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 983
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 984 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1043
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1044 VLIQRGYDSDPVKAWKEAQQK 1064
>gi|348562672|ref|XP_003467133.1| PREDICTED: DNA topoisomerase 2-alpha-like [Cavia porcellus]
Length = 1561
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 137/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M++HRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 615 GLGTSTSKEAKEYFADMKKHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTHFMEDRRQ 674
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 675 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 734
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 735 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNVNLLQPIGQFGTRL 794
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/141 (60%), Positives = 108/141 (76%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKF+V M+ +KL + E GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 956 DYREYHTDTTVKFIVKMTEEKLSEVERAGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1015
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1016 LDILRDFFELRLKYYGLRKEWLLGMLGAESSKLNNQARFILEKIDGKIIIENKPKKELIK 1075
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1076 VLIQRGYDSDPVKAWKEAQQK 1096
>gi|220616|dbj|BAA02076.1| DNA topoisomerase II [Mus musculus]
Length = 1528
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 137/180 (76%), Positives = 156/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKY G DDA I +AFSKK VD+RK WLT +ME+ R+
Sbjct: 614 GLGTSTSKEAKEYFADMKRHRIQFKYPGPEDDAAISLAFSKKQVDDRKEWLTNFMEDRRQ 673
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY ++T +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 674 RKLLGLPEDYLYGQSTSYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 733
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 734 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 793
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/141 (60%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFV+ M+ +KL +AE GLHKVFKLQ++L +SM FD G L K+DT
Sbjct: 955 DYREYHTDTTVKFVIKMTEEKLAEAERVGLHKVFKLQSSLTCNSMVLFDHVGCLKKYDTV 1014
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1015 LDILRDFFELRLKYYGLRKEWLLGMLGAESSKLNNQARFILEKIDGKIVIENKPKKELIK 1074
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1075 VLIQRGYDSDPVKAWKEAQQK 1095
>gi|2909391|emb|CAA76312.1| DNA topoisomerase II alpha [Cricetulus longicaudatus]
Length = 1526
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 156/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK VD+RK WLT +ME+ R+
Sbjct: 614 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQVDDRKEWLTHFMEDRRQ 673
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 674 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 733
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSV E S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 734 KRNDKREVKVAQLAGSVGEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 793
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFV+ M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 955 DYREYHTDTTVKFVIKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1014
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILK+F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1015 LDILKDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1074
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1075 VLIQRGYDSDPVKAWKEAQQK 1095
>gi|395826470|ref|XP_003786441.1| PREDICTED: DNA topoisomerase 2-alpha isoform 1 [Otolemur garnettii]
Length = 1533
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK VD+RK WLT +ME+ R+
Sbjct: 615 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQVDDRKEWLTHFMEDRRQ 674
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 675 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 734
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLL+PIGQFGT L
Sbjct: 735 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLRPIGQFGTRL 794
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 89/141 (63%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 956 DYKEYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1015
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++FY +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1016 LDILRDFYELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1075
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1076 VLIQRGYDSDPVKAWKEAQQK 1096
>gi|427791141|gb|JAA61022.1| Putative dna topoisomerase type ii, partial [Rhipicephalus
pulchellus]
Length = 1662
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF +M RHRI FKY G DD I +AFSKK++++RK WL MEE ++
Sbjct: 722 GLGTSTAKEAKEYFIDMARHRIKFKYQGGEDDRAIELAFSKKMIEQRKEWLRNGMEERKQ 781
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E+G+ E YLY K T+ ITY +FVNKELILFSNMDNERSIPSL DGLKPG RKVL+TC
Sbjct: 782 RRELGLPEVYLYGKDTRNITYEDFVNKELILFSNMDNERSIPSLVDGLKPGQRKVLYTCF 841
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+RE+KVAQLAGSVAEHSAYHHGE SLMSTIINLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 842 KRNDKREIKVAQLAGSVAEHSAYHHGEVSLMSTIINLAQNFVGSNNINLLQPIGQFGTRL 901
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 86/135 (63%), Positives = 102/135 (75%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTDTTV+FVVTM+ +KL KA +GLHKVFKLQT+L SSM FD GVLT F T
Sbjct: 1094 DYKEYHTDTTVRFVVTMTEEKLSKARDEGLHKVFKLQTSLTTSSMVLFDSKGVLTTFRTP 1153
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ILK+FY RLE Y KRK Y+ G+L AEA KL NQARFI+EK D ++IENR++KEMI
Sbjct: 1154 EEILKDFYETRLEGYKKRKAYMMGLLSAEAKKLENQARFILEKIDNLIKIENRRRKEMIL 1213
Query: 339 ELIKRKYDSDPVKSW 353
L +R YD DP+ W
Sbjct: 1214 TLRERGYDPDPIVEW 1228
>gi|395826472|ref|XP_003786442.1| PREDICTED: DNA topoisomerase 2-alpha isoform 2 [Otolemur garnettii]
Length = 1532
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK VD+RK WLT +ME+ R+
Sbjct: 615 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQVDDRKEWLTHFMEDRRQ 674
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 675 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 734
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLL+PIGQFGT L
Sbjct: 735 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLRPIGQFGTRL 794
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 89/141 (63%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 956 DYKEYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1015
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++FY +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1016 LDILRDFYELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1075
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1076 VLIQRGYDSDPVKAWKEAQQK 1096
>gi|400260973|pdb|4FM9|A Chain A, Human Topoisomerase Ii Alpha Bound To Dna
Length = 763
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 185 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTNFMEDRRQ 244
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 245 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 304
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 305 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 364
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 526 DYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 585
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 586 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 645
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 646 VLIQRGYDSDPVKAWKEAQQK 666
>gi|344286028|ref|XP_003414761.1| PREDICTED: DNA topoisomerase 2-alpha [Loxodonta africana]
Length = 1532
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 137/180 (76%), Positives = 156/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 615 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTHFMEDRRQ 674
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY + T +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 675 RKLLGLPEDYLYGQATTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 734
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 735 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 794
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/141 (60%), Positives = 108/141 (76%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKL T+L +SM FD G L K+DT
Sbjct: 956 DYREYHTDTTVKFVVKMTEEKLAEAERAGLHKVFKLHTSLTCNSMVLFDHVGCLKKYDTV 1015
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1016 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1075
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1076 VLIQRGYDSDPVKAWKEAQQK 1096
>gi|391343500|ref|XP_003746047.1| PREDICTED: DNA topoisomerase 2-beta [Metaseiulus occidentalis]
Length = 1489
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 136/180 (75%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYFS+M RHRI F Y+G DD I++AFSKK+VDERKTWLT ME+ ++
Sbjct: 592 GLGTSTAKEAKEYFSDMRRHRITFSYAGAEDDNAIQLAFSKKMVDERKTWLTNGMEDRKQ 651
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ +G+ E YLY K T+A+++ +FV+KELILFSNMDNERSIPSL DG KPG RKVLFTC
Sbjct: 652 RRTLGLPEIYLYGKETRAVSFNDFVHKELILFSNMDNERSIPSLIDGFKPGQRKVLFTCF 711
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQSLM TI+NLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 712 KRNDKREVKVAQLAGSVAEMSAYHHGEQSLMMTIVNLAQNFVGSNNVNLLQPIGQFGTRL 771
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 80/139 (57%), Positives = 104/139 (74%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEY+TDTTV+FVV M L +AE +GLHKVFKLQTTLA +SM FD G + + T
Sbjct: 935 DYKEYNTDTTVRFVVQMDEGNLRRAEDEGLHKVFKLQTTLANTSMVLFDSNGCIRFYQTP 994
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I++EFY VRL+ Y +R++YL G+L AEA KL+NQARFIVEKCDG + +EN+K+KEM+
Sbjct: 995 EEIMQEFYNVRLDGYVRRREYLIGLLTAEAEKLSNQARFIVEKCDGKIHVENKKRKEMMR 1054
Query: 339 ELIKRKYDSDPVKSWKMKQ 357
L+ + YD DP+ WK K
Sbjct: 1055 ILVDKGYDPDPMLRWKEKH 1073
>gi|296202778|ref|XP_002748606.1| PREDICTED: DNA topoisomerase 2-alpha [Callithrix jacchus]
Length = 1531
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/180 (76%), Positives = 156/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKY G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 615 GLGTSTSKEAKEYFADMKRHRIQFKYCGPEDDAAISLAFSKKQIDDRKEWLTNFMEDRRQ 674
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 675 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 734
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 735 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 794
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 956 DYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1015
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1016 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1075
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1076 VLIQRGYDSDPVKAWKEAQQK 1096
>gi|403304571|ref|XP_003942869.1| PREDICTED: DNA topoisomerase 2-alpha [Saimiri boliviensis
boliviensis]
Length = 1471
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/180 (76%), Positives = 156/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKY G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 555 GLGTSTSKEAKEYFADMKRHRIQFKYCGPEDDAAISLAFSKKQIDDRKEWLTNFMEDRRQ 614
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 615 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 674
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 675 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 734
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 896 DYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 955
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 956 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1015
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1016 VLIQRGYDSDPVKAWKEAQQK 1036
>gi|288565|emb|CAA78821.1| DNA topoisomerase II [Homo sapiens]
Length = 1031
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 41 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 100
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 101 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 160
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 161 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 220
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 108/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 381 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 440
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 441 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 500
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L++R Y+SDPVK+WK Q K
Sbjct: 501 QMLVQRGYESDPVKAWKEAQEK 522
>gi|62087338|dbj|BAD92116.1| DNA topoisomerase II, beta isozyme variant [Homo sapiens]
Length = 1009
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 19 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 78
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 79 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 138
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 139 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 198
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 108/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 359 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 418
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 419 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 478
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L++R Y+SDPVK+WK Q K
Sbjct: 479 QMLVQRGYESDPVKAWKEAQEK 500
>gi|328791048|ref|XP_001119985.2| PREDICTED: DNA topoisomerase 2 [Apis mellifera]
Length = 1447
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 134/180 (74%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF NM RHRI F+Y GD DD +I MAFSKK VD+RK WL M+E +R
Sbjct: 605 GLGTSTAKEAKEYFENMTRHRIRFRYDGDQDDQNIIMAFSKKCVDQRKDWLMNHMDETKR 664
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RKE+G+GE YLY K T+ +++++F+N EL+L+SN DN RSIP++ DG KPG RKVL+TCL
Sbjct: 665 RKEIGLGERYLYEKDTRTVSFSDFINVELVLYSNYDNVRSIPNMIDGFKPGQRKVLYTCL 724
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAEHSAYHHGE SLMSTIINLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 725 KRNDKREVKVAQLAGSVAEHSAYHHGEVSLMSTIINLAQNFVGSNNINLLQPIGQFGTRL 784
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/201 (52%), Positives = 139/201 (69%), Gaps = 9/201 (4%)
Query: 164 IINLAQNFVGSNNINLLQ-PIGQFGTFLFIFESTNLSGAVVNALDFGSGGWRFESNDYKE 222
IIN + +G + I + + PIG T+ ++ T V+ + G+ DYKE
Sbjct: 849 IINGEISVIGPDKIEITELPIG---TWTQTYKET-----VLEPMLHGTDKTPATITDYKE 900
Query: 223 YHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQIL 282
Y+TDT V F++ ++ DKL E DGLHK FKLQTT+ ++SMCAFD L K+D+ QIL
Sbjct: 901 YNTDTAVHFIIMLNRDKLLDLERDGLHKAFKLQTTMTVTSMCAFDENQCLQKYDSVLQIL 960
Query: 283 KEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIK 342
K FY VRLE Y KRK+YLEG+L AEA KL+NQARFIVEKCDG + IEN+K+K+MIAELI+
Sbjct: 961 KGFYKVRLEMYHKRKEYLEGILQAEASKLSNQARFIVEKCDGTIVIENKKRKDMIAELIR 1020
Query: 343 RKYDSDPVKSWKMKQNKENAL 363
R+Y+SDPV +WK+ QN+E L
Sbjct: 1021 REYESDPVLAWKLSQNREEVL 1041
>gi|291405994|ref|XP_002719184.1| PREDICTED: DNA topoisomerase II, alpha isozyme-like [Oryctolagus
cuniculus]
Length = 1181
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 615 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTHFMEDRRQ 674
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 675 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 734
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 735 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 794
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 88/141 (62%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 956 DYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1015
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILK+F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1016 LDILKDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1075
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1076 VLIQRGYDSDPVKAWKEAQQK 1096
>gi|345490822|ref|XP_001601580.2| PREDICTED: DNA topoisomerase 2-like [Nasonia vitripennis]
Length = 1512
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 134/180 (74%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST++EAKEYF NM RHRI F+Y GD DD +I MAFSKK VD+RK WLT MEE +R
Sbjct: 608 GLGTSTAQEAKEYFENMARHRIRFRYDGDVDDQNIIMAFSKKCVDQRKDWLTNHMEETKR 667
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RKE+G+GE YLY K T+A+++++F+N EL+LFSN DN RSIP++ DGLKPG RKVLFTC
Sbjct: 668 RKEIGLGERYLYEKDTRAVSFSDFINVELVLFSNYDNIRSIPNMMDGLKPGQRKVLFTCF 727
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQL SVAEHSAYHHGE SLM+TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 728 KRNDKREVKVAQLGASVAEHSAYHHGEMSLMATIVNLAQNFVGSNNINLLQPIGQFGTRL 787
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/201 (51%), Positives = 138/201 (68%), Gaps = 9/201 (4%)
Query: 164 IINLAQNFVGSNNINLLQ-PIGQFGTFLFIFESTNLSGAVVNALDFGSGGWRFESNDYKE 222
+I+ + +G + + + + PIG T+ ++ T V+ + GS DYKE
Sbjct: 901 VISGEISIIGPDKVEITELPIG---TWTQAYKET-----VLEPMLHGSDKTPPVITDYKE 952
Query: 223 YHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQIL 282
Y+TDT V FVVT+ DKL + E DGLHK FKLQTT +I+SMCAFD L KFD QI+
Sbjct: 953 YNTDTMVHFVVTLQRDKLAELERDGLHKAFKLQTTTSITSMCAFDDNLCLKKFDNVCQIM 1012
Query: 283 KEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIK 342
+ F+ VRL+ Y KRKDYLEG+L AE+ KL+NQ+RFI+EKCDG L IEN+KKK+MIAEL++
Sbjct: 1013 RTFFTVRLDLYQKRKDYLEGILQAESAKLSNQSRFIMEKCDGTLTIENKKKKDMIAELVR 1072
Query: 343 RKYDSDPVKSWKMKQNKENAL 363
R YDSDPV +WK+ QN+E L
Sbjct: 1073 RGYDSDPVVAWKLAQNREEVL 1093
>gi|148222806|ref|NP_001082502.1| topoisomerase (DNA) II alpha 170kDa [Xenopus laevis]
gi|47939759|gb|AAH72193.1| LOC398512 protein [Xenopus laevis]
Length = 1579
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 156/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++MERHRI FKY+G DDA I MAFS+K VD+RK WLT +M++ R
Sbjct: 613 GLGTSTSKEAKEYFADMERHRIPFKYAGPIDDAAITMAFSRKKVDDRKEWLTNFMQDRRE 672
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E+YLY K+TK +T+ +F+NKELILFSN DNERSIPSL DGLKPG RKVLFTC
Sbjct: 673 RRLHGLPEEYLYGKSTKYLTFNDFINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCF 732
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 733 KRNDKREVKVAQLAGSVAEMSAYHHGEISLMMTIINLAQNFVGSNNVNLLQPIGQFGTRL 792
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/141 (58%), Positives = 108/141 (76%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTDTTV+F+V M+ KL +AE GLHKVFKLQ +L +SM FD G L K++T
Sbjct: 954 DYKEYHTDTTVRFLVKMTEQKLAEAEAAGLHKVFKLQASLTCNSMVLFDHVGCLRKYETV 1013
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+EF+ +R++YY+ RKD+L G+L AEA KL+NQARFI+EK +G + IEN+ KKE+I
Sbjct: 1014 LDILREFFDLRVKYYSLRKDWLVGMLTAEASKLSNQARFILEKIEGKIVIENKPKKELIQ 1073
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
L++R YDSDPVK+WK Q K
Sbjct: 1074 MLVQRGYDSDPVKTWKQTQEK 1094
>gi|380013857|ref|XP_003690962.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-like [Apis
florea]
Length = 1497
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 134/180 (74%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF NM RHRI F+Y GD DD +I MAFSKK VD+RK WL M+E +R
Sbjct: 605 GLGTSTAKEAKEYFENMTRHRIRFRYDGDQDDQNIIMAFSKKCVDQRKDWLMNHMDETKR 664
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RKE+G+GE YLY K T+ +++++F+N EL+L+SN DN RSIP++ DG KPG RKVL+TCL
Sbjct: 665 RKEIGLGERYLYEKDTRTVSFSDFINVELVLYSNYDNVRSIPNMIDGFKPGQRKVLYTCL 724
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAEHSAYHHGE SLMSTIINLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 725 KRNDKREVKVAQLAGSVAEHSAYHHGEVSLMSTIINLAQNFVGSNNINLLQPIGQFGTRL 784
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 104/201 (51%), Positives = 140/201 (69%), Gaps = 9/201 (4%)
Query: 164 IINLAQNFVGSNNINLLQ-PIGQFGTFLFIFESTNLSGAVVNALDFGSGGWRFESNDYKE 222
IIN + +G + + + + PIG T+ ++ T V+ + G+ DYKE
Sbjct: 898 IINGEISVIGPDKVEITELPIG---TWTQTYKET-----VLEPMLHGTDKTPATITDYKE 949
Query: 223 YHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQIL 282
Y+TDT V F++ ++ DKL + E DGLHK FKLQTT+ ++SMCAFD L K+D+ QIL
Sbjct: 950 YNTDTAVHFIIMLNRDKLLELERDGLHKAFKLQTTMTVTSMCAFDENQCLQKYDSVLQIL 1009
Query: 283 KEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIK 342
K FY VRLE Y KRK+YLEG+L AEA KL+NQARFIVEKCDG + IEN+K+K+MIAELI+
Sbjct: 1010 KGFYKVRLEMYHKRKEYLEGILQAEASKLSNQARFIVEKCDGTIVIENKKRKDMIAELIR 1069
Query: 343 RKYDSDPVKSWKMKQNKENAL 363
R+Y+SDPV +WK+ QN+E L
Sbjct: 1070 REYESDPVLAWKLSQNREEVL 1090
>gi|45384180|ref|NP_990413.1| DNA topoisomerase 2-beta [Gallus gallus]
gi|3122959|sp|O42131.1|TOP2B_CHICK RecName: Full=DNA topoisomerase 2-beta; AltName: Full=DNA
topoisomerase II, beta isozyme
gi|2463529|dbj|BAA22540.1| DNA topoisomeraseII_beta [Gallus gallus]
Length = 1627
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 156/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 641 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 700
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DGLKPG RKVLFTC
Sbjct: 701 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCF 760
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 761 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNVNLLQPIGQFGTRL 820
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 106/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K++T
Sbjct: 981 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTSLTCNSMVLFDHMGCLKKYET 1040
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY+ RK++L G+LGAE+ KL NQARFI+EK G + IENR K+++I
Sbjct: 1041 VQDILKEFFDLRLHYYSLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKRDLI 1100
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1101 QMLVQRGYESDPVKAW 1116
>gi|345317767|ref|XP_001519680.2| PREDICTED: DNA topoisomerase 2-alpha, partial [Ornithorhynchus
anatinus]
Length = 1764
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 154/180 (85%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYFS+M RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 860 GLGTSTSKEAKEYFSDMTRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTHFMEDRRQ 919
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK G+ EDYLY K T +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 920 RKLHGLPEDYLYGKATNYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 979
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 980 RRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNVNLLQPIGQFGTRL 1039
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/141 (59%), Positives = 107/141 (75%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKF+V M+ KL +AE GLHKVFKLQT L +SM FD G L K+DT
Sbjct: 1201 DYREYHTDTTVKFIVKMTEQKLAEAEAAGLHKVFKLQTNLTCNSMVLFDHVGCLKKYDTA 1260
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ +L NQARFI+EK +G + IEN+ KKE+I
Sbjct: 1261 LDILRDFFELRLKYYGLRKEWLVGMLGAESARLNNQARFILEKIEGKIVIENKPKKELIK 1320
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1321 VLIQRGYDSDPVKAWKEAQQK 1341
>gi|449273806|gb|EMC83192.1| DNA topoisomerase 2-beta, partial [Columba livia]
Length = 1611
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 156/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 625 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 684
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DGLKPG RKVLFTC
Sbjct: 685 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCF 744
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 745 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNVNLLQPIGQFGTRL 804
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 106/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K++T
Sbjct: 965 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTSLTCNSMVLFDHMGCLKKYET 1024
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY+ RK++L G+LGAE+ KL NQARF++EK G + IENR K+++I
Sbjct: 1025 VQDILKEFFDLRLHYYSLRKEWLVGMLGAESTKLNNQARFVLEKIQGKITIENRSKRDLI 1084
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1085 QMLVQRGYESDPVKAW 1100
>gi|224045386|ref|XP_002197470.1| PREDICTED: DNA topoisomerase 2-beta [Taeniopygia guttata]
Length = 1622
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 156/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 636 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 695
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DGLKPG RKVLFTC
Sbjct: 696 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCF 755
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 756 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNVNLLQPIGQFGTRL 815
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 106/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K++T
Sbjct: 976 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTSLTCNSMVLFDHMGCLKKYET 1035
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY+ RK++L G+LGAE+ KL NQARFI+EK G + IENR K+++I
Sbjct: 1036 VQDILKEFFDLRLHYYSLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKRDLI 1095
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1096 QMLVQRGYESDPVKAW 1111
>gi|426237937|ref|XP_004012914.1| PREDICTED: DNA topoisomerase 2-alpha [Ovis aries]
Length = 1530
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 136/180 (75%), Positives = 156/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 615 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTHFMEDRRQ 674
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ +DYLY + T +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 675 RKLLGLPDDYLYGQATTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 734
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 735 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 794
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 956 DYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTA 1015
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1016 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1075
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1076 VLIQRGYDSDPVKAWKEAQQK 1096
>gi|326921999|ref|XP_003207240.1| PREDICTED: DNA topoisomerase 2-beta-like, partial [Meleagris
gallopavo]
Length = 1688
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 156/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 702 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 761
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DGLKPG RKVLFTC
Sbjct: 762 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCF 821
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 822 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNVNLLQPIGQFGTRL 881
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 106/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K++T
Sbjct: 1042 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTSLTCNSMVLFDHMGCLKKYET 1101
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY+ RK++L G+LGAE+ KL NQARFI+EK G + IENR K+++I
Sbjct: 1102 VQDILKEFFDLRLHYYSLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKRDLI 1161
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1162 QMLVQRGYESDPVKAW 1177
>gi|240952142|ref|XP_002399322.1| DNA topoisomerase II, putative [Ixodes scapularis]
gi|215490528|gb|EEC00171.1| DNA topoisomerase II, putative [Ixodes scapularis]
Length = 1582
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 163/208 (78%), Gaps = 11/208 (5%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST KEAKEYFS+M RHRI FKY G DD I +AFSKKL D+RK WL MEE ++
Sbjct: 621 GLGTSTGKEAKEYFSDMLRHRIKFKYQGGEDDRAIELAFSKKLADQRKDWLRGGMEERKQ 680
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E+G+ E YLY K TK ITY +FVNKELILFSNMDNERSIPSL DGLKPG RKVL+TC
Sbjct: 681 RRELGLPEIYLYGKETKNITYEDFVNKELILFSNMDNERSIPSLVDGLKPGQRKVLYTCF 740
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+RE+KVAQLAGSVAEHSAYHHGE SLMSTII LAQ+FVGSNNINLL PIGQFGT L
Sbjct: 741 KRNDKREIKVAQLAGSVAEHSAYHHGEMSLMSTIIGLAQDFVGSNNINLLLPIGQFGTRL 800
Query: 191 ----------FIFES-TNLSGAVVNALD 207
+IF + L+ +V ALD
Sbjct: 801 QGGKDAASPRYIFTMLSPLARLIVPALD 828
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/139 (62%), Positives = 106/139 (76%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTDTTV+FVVTMS DKL KA+ +GLHKVFKLQTTL SSM F+ GVLT F +
Sbjct: 962 DYKEYHTDTTVRFVVTMSEDKLSKAQDEGLHKVFKLQTTLCTSSMVLFNSKGVLTTFRNS 1021
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I+++FY RLE Y KRK Y+ G+L AEA +L NQARFI+EK D ++IENRK+KEMI
Sbjct: 1022 TEIMQDFYETRLEGYKKRKAYMLGLLTAEAKRLENQARFILEKIDNVIKIENRKRKEMIL 1081
Query: 339 ELIKRKYDSDPVKSWKMKQ 357
L +R YD DP+ WK +Q
Sbjct: 1082 TLRERGYDPDPLLEWKKQQ 1100
>gi|322786140|gb|EFZ12747.1| hypothetical protein SINV_05088 [Solenopsis invicta]
Length = 1518
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 154/180 (85%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF NM RHRI F+Y G DD +I MAFSKK VD+RK WL M E +R
Sbjct: 613 GLGTSTAKEAKEYFENMTRHRIRFRYDGTQDDQNIIMAFSKKCVDQRKDWLMNHMNETKR 672
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RKE+G+GE YLY K T+ +++++F+N EL+L+SN DN RSIP+L DGLKPG RKVLFTCL
Sbjct: 673 RKEIGLGERYLYEKDTRTVSFSDFINVELVLYSNYDNVRSIPNLMDGLKPGQRKVLFTCL 732
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAEHSAYHHGE SLM+TIINLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 733 KRNDKREVKVAQLAGSVAEHSAYHHGETSLMATIINLAQNFVGSNNINLLQPIGQFGTRL 792
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 105/201 (52%), Positives = 137/201 (68%), Gaps = 9/201 (4%)
Query: 164 IINLAQNFVGSNNINLLQ-PIGQFGTFLFIFESTNLSGAVVNALDFGSGGWRFESNDYKE 222
+I+ + +G + + + + PIG T+ ++ T V+ + GS DYKE
Sbjct: 906 VISGEISVIGPDKVEITELPIG---TWTQTYKET-----VLEPMLHGSDKTPAIITDYKE 957
Query: 223 YHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQIL 282
Y+TDT V F+V M+ DKL + E DGLHK FKLQTT +I+SMCAFD L K+D QIL
Sbjct: 958 YNTDTAVHFIVIMNRDKLVELERDGLHKAFKLQTTTSITSMCAFDENQCLNKYDNVVQIL 1017
Query: 283 KEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIK 342
K FY VRL+ Y KRKDYLEG+L AEA KL+NQARFI+EKCDG L +EN+KKK+MI ELI+
Sbjct: 1018 KLFYKVRLDMYHKRKDYLEGILQAEAAKLSNQARFIIEKCDGTLVVENKKKKDMITELIR 1077
Query: 343 RKYDSDPVKSWKMKQNKENAL 363
R Y++DPV +WKM QN+E L
Sbjct: 1078 RNYETDPVVAWKMSQNREQVL 1098
>gi|355747103|gb|EHH51717.1| hypothetical protein EGM_11149, partial [Macaca fascicularis]
Length = 1603
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 613 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 672
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 673 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 732
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 733 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 792
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 108/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 953 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1012
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1013 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1072
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L++R Y+SDPVK+WK Q K
Sbjct: 1073 QMLVQRGYESDPVKAWKEAQEK 1094
>gi|410971557|ref|XP_003992234.1| PREDICTED: DNA topoisomerase 2-beta [Felis catus]
Length = 1628
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 641 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 700
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 701 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 760
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 761 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 820
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 981 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1040
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1041 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1100
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1101 QMLVQRGYESDPVKAW 1116
>gi|380798189|gb|AFE70970.1| DNA topoisomerase 2-beta, partial [Macaca mulatta]
Length = 1594
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 604 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 663
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 664 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 723
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 724 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 783
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 108/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 944 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1003
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1004 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1063
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L++R Y+SDPVK+WK Q K
Sbjct: 1064 QMLVQRGYESDPVKAWKEAQEK 1085
>gi|440908155|gb|ELR58207.1| DNA topoisomerase 2-beta, partial [Bos grunniens mutus]
Length = 1597
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 613 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 672
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 673 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 732
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 733 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 792
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 953 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1012
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1013 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1072
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1073 QMLVQRGYESDPVKAW 1088
>gi|281341246|gb|EFB16830.1| hypothetical protein PANDA_016140 [Ailuropoda melanoleuca]
Length = 1599
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 613 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 672
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 673 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 732
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 733 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 792
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 953 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1012
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1013 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1072
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1073 QMLVQRGYESDPVKAW 1088
>gi|1066004|dbj|BAA07236.1| typr II DNA topoisomerase beta isoform [Mus musculus]
Length = 1612
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 624 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 683
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 684 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 743
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 744 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 803
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 964 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1023
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1024 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1083
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1084 QMLVQRGYESDPVKAW 1099
>gi|388454810|ref|NP_001252630.1| DNA topoisomerase 2-beta [Macaca mulatta]
gi|387273325|gb|AFJ70157.1| DNA topoisomerase 2-beta [Macaca mulatta]
Length = 1621
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 631 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 690
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 691 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 750
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 751 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 810
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 108/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 971 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1030
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1031 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1090
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L++R Y+SDPVK+WK Q K
Sbjct: 1091 QMLVQRGYESDPVKAWKEAQEK 1112
>gi|307180209|gb|EFN68242.1| DNA topoisomerase 2 [Camponotus floridanus]
Length = 1502
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 133/180 (73%), Positives = 154/180 (85%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF NM RHRI F+Y GD DD +I MAFSKK VD+RK WL M E +R
Sbjct: 607 GLGTSTAKEAKEYFENMARHRIRFRYEGDRDDQNIIMAFSKKCVDQRKDWLMNHMNETKR 666
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RKE+G+GE YLY K T+ +++++F+N EL+L+SN DN RSIP++ DG KPG RKV+FTCL
Sbjct: 667 RKEIGLGERYLYEKDTRTVSFSDFINVELVLYSNYDNVRSIPNMIDGFKPGQRKVMFTCL 726
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAEHSAYHHGE SLM+TIINLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 727 KRNDKREVKVAQLAGSVAEHSAYHHGETSLMATIINLAQNFVGSNNINLLQPIGQFGTRL 786
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 91/145 (62%), Positives = 113/145 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEY+TDT V F++ ++ DKL + E +GLHK FK+Q+T I+SMCAFD L K++
Sbjct: 948 DYKEYNTDTAVHFIIILNRDKLLELEREGLHKAFKIQSTTTITSMCAFDENQCLNKYENV 1007
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
QILK FY VRLE Y KRKDYLEG+L AE+ KL+NQARFI+EKCDG L IEN+KKK+MIA
Sbjct: 1008 IQILKVFYKVRLETYHKRKDYLEGILKAESAKLSNQARFILEKCDGTLVIENKKKKDMIA 1067
Query: 339 ELIKRKYDSDPVKSWKMKQNKENAL 363
EL++R YDSDPV WK+ QN+E L
Sbjct: 1068 ELVRRNYDSDPVMVWKLSQNREQVL 1092
>gi|328550504|ref|NP_001127186.1| DNA topoisomerase 2-beta [Pongo abelii]
gi|55725810|emb|CAH89685.1| hypothetical protein [Pongo abelii]
Length = 1620
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 631 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 690
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 691 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 750
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 751 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 810
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 108/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 970 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1029
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1030 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1089
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L++R Y+SDPVK+WK Q K
Sbjct: 1090 QMLVQRGYESDPVKAWKEAQEK 1111
>gi|291045133|ref|NP_001094328.1| topoisomerase II beta [Rattus norvegicus]
gi|109945583|dbj|BAE96971.1| DNA topoisomerase IIbeta [Rattus norvegicus]
Length = 1614
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 624 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 683
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 684 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 743
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 744 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 803
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 964 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1023
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1024 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1083
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1084 QMLVQRGYESDPVKAW 1099
>gi|332215374|ref|XP_003256818.1| PREDICTED: DNA topoisomerase 2-beta [Nomascus leucogenys]
Length = 1621
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 631 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 690
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 691 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 750
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 751 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 810
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 108/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 971 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1030
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1031 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1090
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L++R Y+SDPVK+WK Q K
Sbjct: 1091 QMLVQRGYESDPVKAWKEAQEK 1112
>gi|395540283|ref|XP_003772086.1| PREDICTED: DNA topoisomerase 2-beta [Sarcophilus harrisii]
Length = 1601
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 616 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 675
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 676 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 735
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 736 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 795
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/136 (61%), Positives = 106/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 956 SDYKEYHTDTTVKFVVKMTEEKLVQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1015
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY+ RK++L G+LGAE+ KL NQARFI+EK G + IENR K+++I
Sbjct: 1016 VQDILKEFFDLRLNYYSLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKRDLI 1075
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1076 QMLVQRGYESDPVKAW 1091
>gi|301782147|ref|XP_002926491.1| PREDICTED: DNA topoisomerase 2-beta-like [Ailuropoda melanoleuca]
Length = 1608
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 622 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 681
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 682 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 741
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 742 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 801
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 962 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1021
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1022 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1081
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1082 QMLVQRGYESDPVKAW 1097
>gi|34328148|ref|NP_033435.2| DNA topoisomerase 2-beta [Mus musculus]
gi|76363529|sp|Q64511.2|TOP2B_MOUSE RecName: Full=DNA topoisomerase 2-beta; AltName: Full=DNA
topoisomerase II, beta isozyme
gi|32451610|gb|AAH54541.1| Topoisomerase (DNA) II beta [Mus musculus]
gi|54887373|gb|AAH41106.1| Topoisomerase (DNA) II beta [Mus musculus]
gi|148688695|gb|EDL20642.1| topoisomerase (DNA) II beta [Mus musculus]
Length = 1612
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 624 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 683
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 684 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 743
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 744 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 803
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 964 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1023
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1024 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1083
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1084 QMLVQRGYESDPVKAW 1099
>gi|3024753|sp|Q64399.1|TOP2B_CRILO RecName: Full=DNA topoisomerase 2-beta; AltName: Full=DNA
topoisomerase II, beta isozyme
gi|2137065|pir||S59969 DNA topoisomerase (ATP-hydrolyzing) (EC 5.99.1.3) isoform beta -
Chinese hamster
gi|790988|emb|CAA60173.1| DNA topoisomerase (ATP-hydrolysing) [Cricetulus longicaudatus]
Length = 1612
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 624 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 683
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 684 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 743
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 744 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 803
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/136 (61%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 964 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1023
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1024 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1083
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPV++W
Sbjct: 1084 QMLVQRGYESDPVRAW 1099
>gi|402861720|ref|XP_003895231.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-beta [Papio
anubis]
Length = 1599
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 636 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 695
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 696 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 755
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 756 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 815
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 108/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 976 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1035
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1036 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1095
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L++R Y+SDPVK+WK Q K
Sbjct: 1096 QMLVQRGYESDPVKAWKEAQEK 1117
>gi|444721790|gb|ELW62503.1| DNA topoisomerase 2-beta [Tupaia chinensis]
Length = 1652
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 628 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 687
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 688 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 747
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 748 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 807
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 108/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 968 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1027
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1028 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1087
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L++R Y+SDPVK+WK Q K
Sbjct: 1088 QMLVQRGYESDPVKAWKEAQEK 1109
>gi|432115884|gb|ELK37029.1| DNA topoisomerase 2-beta, partial [Myotis davidii]
Length = 1608
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 613 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 672
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 673 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 732
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 733 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 792
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 108/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 953 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1012
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1013 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1072
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L++R Y+SDPVK+WK Q K
Sbjct: 1073 QMLVQRGYESDPVKAWKEAQEK 1094
>gi|20141946|sp|Q02880.3|TOP2B_HUMAN RecName: Full=DNA topoisomerase 2-beta; AltName: Full=DNA
topoisomerase II, beta isozyme
Length = 1626
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 636 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 695
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 696 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 755
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 756 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 815
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 108/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 976 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1035
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1036 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1095
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L++R Y+SDPVK+WK Q K
Sbjct: 1096 QMLVQRGYESDPVKAWKEAQEK 1117
>gi|350401441|ref|XP_003486153.1| PREDICTED: DNA topoisomerase 2-like [Bombus impatiens]
Length = 1502
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 133/180 (73%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF NM RHRI F+Y GD DD +I MAFSKK VD+RK WL M+E +R
Sbjct: 605 GLGTSTAKEAKEYFENMTRHRIRFRYDGDQDDQNIIMAFSKKCVDQRKDWLMNHMDETKR 664
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RKE+G+GE +LY K T+ +++++F+N EL+L+SN DN RSIP++ DG KPG RKVL+TCL
Sbjct: 665 RKEIGLGERFLYEKDTRTVSFSDFINVELVLYSNYDNVRSIPNMIDGFKPGQRKVLYTCL 724
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAEHSAYHHGE SLMSTIINLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 725 KRNDKREVKVAQLAGSVAEHSAYHHGEVSLMSTIINLAQNFVGSNNINLLQPIGQFGTRL 784
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/145 (63%), Positives = 116/145 (80%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEY+TDT V F++ ++ DKL + E DGLHK FKLQTT ++SMCAFD L K+D+
Sbjct: 946 DYKEYNTDTAVHFIIMINRDKLVELERDGLHKAFKLQTTTTVTSMCAFDENLCLQKYDSV 1005
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
QILK FY VRLE Y KRK+YLEG+L AEA KL+NQARFI+EKCDG + IEN+K+K+MIA
Sbjct: 1006 LQILKGFYKVRLETYHKRKEYLEGILQAEASKLSNQARFILEKCDGTIVIENKKRKDMIA 1065
Query: 339 ELIKRKYDSDPVKSWKMKQNKENAL 363
ELI+R+Y+SDPV +WK+ QN+E L
Sbjct: 1066 ELIRREYESDPVLAWKLSQNREEVL 1090
>gi|410353945|gb|JAA43576.1| topoisomerase (DNA) II beta 180kDa [Pan troglodytes]
Length = 1621
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 631 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 690
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 691 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 750
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 751 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 810
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 108/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 971 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1030
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1031 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1090
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L++R Y+SDPVK+WK Q K
Sbjct: 1091 QMLVQRGYESDPVKAWKEAQEK 1112
>gi|332816287|ref|XP_516332.3| PREDICTED: DNA topoisomerase 2-beta [Pan troglodytes]
Length = 1621
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 631 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 690
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 691 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 750
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 751 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 810
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 108/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 971 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1030
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1031 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1090
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L++R Y+SDPVK+WK Q K
Sbjct: 1091 QMLVQRGYESDPVKAWKEAQEK 1112
>gi|19913408|ref|NP_001059.2| DNA topoisomerase 2-beta [Homo sapiens]
gi|119584761|gb|EAW64357.1| topoisomerase (DNA) II beta 180kDa, isoform CRA_a [Homo sapiens]
gi|162317664|gb|AAI56331.1| Topoisomerase (DNA) II beta 180kDa [synthetic construct]
gi|162318196|gb|AAI57119.1| Topoisomerase (DNA) II beta 180kDa [synthetic construct]
Length = 1621
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 631 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 690
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 691 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 750
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 751 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 810
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 108/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 971 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1030
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1031 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1090
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L++R Y+SDPVK+WK Q K
Sbjct: 1091 QMLVQRGYESDPVKAWKEAQEK 1112
>gi|37231|emb|CAA48197.1| DNA topoisomerase II [Homo sapiens]
Length = 1621
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 631 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 690
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 691 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 750
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 751 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 810
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 108/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 971 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1030
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1031 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1090
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L++R Y+SDPVK+WK Q K
Sbjct: 1091 QMLVQRGYESDPVKAWKEAQEK 1112
>gi|417414445|gb|JAA53515.1| Putative dna topoisomerase type ii, partial [Desmodus rotundus]
Length = 1639
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 634 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 693
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 694 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 753
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 754 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 813
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 974 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1033
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1034 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKIAIENRSKKDLI 1093
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1094 QMLVQRGYESDPVKAW 1109
>gi|340729154|ref|XP_003402873.1| PREDICTED: DNA topoisomerase 2-like [Bombus terrestris]
Length = 1502
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 133/180 (73%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF NM RHRI F+Y GD DD +I MAFSKK VD+RK WL M+E +R
Sbjct: 605 GLGTSTAKEAKEYFENMTRHRIRFRYDGDQDDQNIIMAFSKKCVDQRKDWLMNHMDETKR 664
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RKE+G+GE +LY K T+ +++++F+N EL+L+SN DN RSIP++ DG KPG RKVL+TCL
Sbjct: 665 RKEIGLGERFLYEKDTRTVSFSDFINVELVLYSNYDNVRSIPNMIDGFKPGQRKVLYTCL 724
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAEHSAYHHGE SLMSTIINLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 725 KRNDKREVKVAQLAGSVAEHSAYHHGEVSLMSTIINLAQNFVGSNNINLLQPIGQFGTRL 784
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/146 (63%), Positives = 117/146 (80%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEY+TDT V F++ ++ DKL + E DGLHK FKLQTT ++SMCAFD L K+D+
Sbjct: 945 SDYKEYNTDTAVHFIIMINRDKLVELERDGLHKAFKLQTTTTVTSMCAFDENLCLQKYDS 1004
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
QILK FY VRLE Y KRK+YLEG+L AEA KL+NQARFI+EKCDG + IEN+K+K+MI
Sbjct: 1005 VLQILKGFYKVRLETYHKRKEYLEGILQAEASKLSNQARFILEKCDGTIVIENKKRKDMI 1064
Query: 338 AELIKRKYDSDPVKSWKMKQNKENAL 363
AELI+R+Y+SDPV +WK+ QN+E L
Sbjct: 1065 AELIRREYESDPVLAWKLSQNREEVL 1090
>gi|119584763|gb|EAW64359.1| topoisomerase (DNA) II beta 180kDa, isoform CRA_c [Homo sapiens]
Length = 1626
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 636 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 695
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 696 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 755
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 756 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 815
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 108/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 976 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1035
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1036 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1095
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L++R Y+SDPVK+WK Q K
Sbjct: 1096 QMLVQRGYESDPVKAWKEAQEK 1117
>gi|417413864|gb|JAA53242.1| Putative dna topoisomerase type ii, partial [Desmodus rotundus]
Length = 1494
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 504 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 563
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 564 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 623
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 624 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 683
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 104/136 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL SM FD G L K++T
Sbjct: 844 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCFSMVLFDHMGCLKKYET 903
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 904 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKIAIENRSKKDLI 963
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 964 QMLVQRGYESDPVKAW 979
>gi|397512028|ref|XP_003826360.1| PREDICTED: DNA topoisomerase 2-beta [Pan paniscus]
Length = 1618
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 628 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 687
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 688 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 747
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 748 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 807
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 108/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 968 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1027
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1028 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1087
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L++R Y+SDPVK+WK Q K
Sbjct: 1088 QMLVQRGYESDPVKAWKEAQEK 1109
>gi|426339768|ref|XP_004033813.1| PREDICTED: DNA topoisomerase 2-beta [Gorilla gorilla gorilla]
Length = 1518
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 592 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 651
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 652 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 711
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 712 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 771
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 108/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 932 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 991
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 992 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1051
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L++R Y+SDPVK+WK Q K
Sbjct: 1052 QMLVQRGYESDPVKAWKEAQEK 1073
>gi|385648284|ref|NP_001245315.1| topoisomerase (DNA) II beta 180kDa [Sus scrofa]
Length = 1614
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 628 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 687
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 688 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 747
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 748 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 807
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 968 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1027
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1028 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1087
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1088 QMLVQRGYESDPVKAW 1103
>gi|119584762|gb|EAW64358.1| topoisomerase (DNA) II beta 180kDa, isoform CRA_b [Homo sapiens]
Length = 1643
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 631 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 690
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 691 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 750
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 751 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 810
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 108/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 971 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1030
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1031 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1090
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L++R Y+SDPVK+WK Q K
Sbjct: 1091 QMLVQRGYESDPVKAWKEAQEK 1112
>gi|3869382|gb|AAC77432.1| DNA topoisomerase II beta [Homo sapiens]
Length = 1598
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 608 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 667
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 668 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 727
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 728 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 787
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/142 (59%), Positives = 106/142 (74%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTV VV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 948 SDYKEYHTDTTVNSVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1007
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1008 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1067
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L++R Y+SDPVK+WK Q K
Sbjct: 1068 QMLVQRGYESDPVKAWKEAQEK 1089
>gi|417413901|gb|JAA53260.1| Putative dna topoisomerase type ii, partial [Desmodus rotundus]
Length = 1603
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 613 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 672
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 673 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 732
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 733 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 792
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 953 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1012
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1013 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKIAIENRSKKDLI 1072
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1073 QMLVQRGYESDPVKAW 1088
>gi|296228227|ref|XP_002759705.1| PREDICTED: DNA topoisomerase 2-beta-like [Callithrix jacchus]
Length = 1620
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 631 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 690
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 691 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 750
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 751 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 810
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 971 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1030
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1031 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1090
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1091 QMLVQRGYESDPVKAW 1106
>gi|431919412|gb|ELK17931.1| DNA topoisomerase 2-beta [Pteropus alecto]
Length = 1606
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 619 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 678
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 679 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 738
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 739 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 798
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/142 (60%), Positives = 108/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 959 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1018
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY R+++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1019 VQDILKEFFDLRLSYYGLRREWLVGMLGAESAKLNNQARFILEKIQGKITIENRSKKDLI 1078
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L++R Y+SDPVK+WK Q K
Sbjct: 1079 QMLVQRGYESDPVKAWKEAQEK 1100
>gi|426256620|ref|XP_004021936.1| PREDICTED: DNA topoisomerase 2-beta [Ovis aries]
Length = 1652
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 668 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 727
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 728 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 787
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 788 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 847
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 85/136 (62%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV MS +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 1008 SDYKEYHTDTTVKFVVKMSEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1067
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1068 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1127
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1128 QMLVQRGYESDPVKAW 1143
>gi|345788922|ref|XP_534241.3| PREDICTED: DNA topoisomerase 2-beta [Canis lupus familiaris]
Length = 1644
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 657 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 716
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 717 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 776
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 777 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 836
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 997 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1056
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1057 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1116
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1117 QMLVQRGYESDPVKAW 1132
>gi|390342282|ref|XP_783546.2| PREDICTED: DNA topoisomerase 2-beta [Strongylocentrotus purpuratus]
Length = 1673
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 132/180 (73%), Positives = 157/180 (87%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST KEAKEYF++MERHRI F+Y+G +DDA I +AFSKK V++RK WL+ W+EE R
Sbjct: 646 GLGTSTMKEAKEYFTDMERHRIPFEYTGPDDDAAIVLAFSKKKVEDRKVWLSEWLEERRS 705
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RKE G+GE YLY K TK ++Y EF+NKEL+LFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 706 RKETGLGERYLYQKDTKKVSYNEFINKELVLFSNADNERSIPSMVDGLKPGQRKVLFTCF 765
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
K+ +++E+KVAQ+AG+V+E SAYHHGEQSLMSTIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 766 KKYEKKEIKVAQMAGAVSELSAYHHGEQSLMSTIINLAQNFVGSNNLNLLQPIGQFGTRL 825
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/166 (51%), Positives = 119/166 (71%), Gaps = 1/166 (0%)
Query: 195 STNLSGAVVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKL 254
+ N +V+ + +G+ + +DYKEYHTDTTVKFVV M+ D+L + E +GLHK+FKL
Sbjct: 963 TQNYKESVLENMVYGTDKVKPSISDYKEYHTDTTVKFVVKMNEDRLLRGEEEGLHKMFKL 1022
Query: 255 QTTLAISS-MCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTN 313
QTT + ++ M +DR+G + ++D +IL+EF+ +R+E Y KRK YLEG+L AE+ KL N
Sbjct: 1023 QTTFSQANLMVLYDRHGCIRRYDNVEEILREFFTLRMELYHKRKAYLEGILEAESSKLNN 1082
Query: 314 QARFIVEKCDGDLRIENRKKKEMIAELIKRKYDSDPVKSWKMKQNK 359
QARFI+EK DG + IEN+ K MI++L R YDSDPVK+WK Q K
Sbjct: 1083 QARFIMEKIDGKVVIENKSKSSMISQLTSRGYDSDPVKAWKEAQQK 1128
>gi|354474033|ref|XP_003499236.1| PREDICTED: DNA topoisomerase 2-beta-like [Cricetulus griseus]
Length = 1726
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 738 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 797
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 798 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 857
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 858 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 917
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 104/136 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 1078 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1137
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+L AE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1138 VQDILKEFFDLRLSYYGLRKEWLVGMLPAESTKLNNQARFILEKIQGKITIENRSKKDLI 1197
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPV++W
Sbjct: 1198 QMLVQRGYESDPVRAW 1213
>gi|440904260|gb|ELR54799.1| DNA topoisomerase 2-alpha, partial [Bos grunniens mutus]
Length = 1600
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK D+RK WLT +ME+ R+
Sbjct: 685 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQTDDRKEWLTHFMEDRRQ 744
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ +DYLY + T +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 745 RKLLGLPDDYLYGQATTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 804
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 805 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 864
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 1026 DYREYHTDTTVKFVVKMTEEKLAEAERAGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1085
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1086 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1145
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1146 VLIQRGYDSDPVKAWKEAQQK 1166
>gi|355725616|gb|AES08613.1| topoisomerase II beta 180kDa [Mustela putorius furo]
Length = 1482
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 614 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 673
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 674 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 733
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 734 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 793
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 954 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1013
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1014 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1073
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1074 QMLVQRGYESDPVKAW 1089
>gi|338714796|ref|XP_001492165.2| PREDICTED: DNA topoisomerase 2-beta-like [Equus caballus]
Length = 1627
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 640 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 699
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 700 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 759
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 760 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 819
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 980 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1039
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1040 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1099
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1100 QMLVQRGYESDPVKAW 1115
>gi|307211209|gb|EFN87409.1| DNA topoisomerase 2 [Harpegnathos saltator]
Length = 1492
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 133/180 (73%), Positives = 154/180 (85%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF NM RHRI F+Y G+ DD +I MAFSKK VD+RK WL M E +R
Sbjct: 605 GLGTSTAKEAKEYFENMARHRIRFRYDGEQDDQNIIMAFSKKCVDQRKDWLMNHMNETKR 664
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RKE+G+ E YLY K T+A+++++F+N EL+L+SN DN RSIP++ DG KPG RKV+FTCL
Sbjct: 665 RKEIGLSERYLYEKDTRAVSFSDFINVELVLYSNYDNVRSIPNMIDGFKPGQRKVMFTCL 724
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRNDRREVKVAQLAGSVAEHSAYHHGE SLM+TIINLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 725 KRNDRREVKVAQLAGSVAEHSAYHHGETSLMATIINLAQNFVGSNNINLLQPIGQFGTRL 784
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 104/201 (51%), Positives = 139/201 (69%), Gaps = 9/201 (4%)
Query: 164 IINLAQNFVGSNNINLLQ-PIGQFGTFLFIFESTNLSGAVVNALDFGSGGWRFESNDYKE 222
+I+ + +G + + + + PIG T+ ++ T V+ + GS DYKE
Sbjct: 898 VISGEISVIGPDKLEITELPIG---TWTQTYKET-----VLEPMLHGSDKTPAVITDYKE 949
Query: 223 YHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQIL 282
Y+TDT V F+V ++ DKL + E DGLHK FK+QTT+ I+SMCAFD L K+D+ QIL
Sbjct: 950 YNTDTAVHFIVMLNRDKLLELEKDGLHKAFKIQTTMTITSMCAFDENQCLNKYDSVIQIL 1009
Query: 283 KEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIK 342
K FY VR++ Y KRKDYLEGVL AEA KL+NQARFI+EKCDG L IEN+KKK+MIAEL++
Sbjct: 1010 KRFYKVRMDTYHKRKDYLEGVLQAEAAKLSNQARFILEKCDGTLVIENKKKKDMIAELVR 1069
Query: 343 RKYDSDPVKSWKMKQNKENAL 363
R Y+SDPV +WK+ QN+E L
Sbjct: 1070 RNYESDPVVAWKLSQNREQVL 1090
>gi|403290004|ref|XP_003936124.1| PREDICTED: DNA topoisomerase 2-beta [Saimiri boliviensis
boliviensis]
Length = 1715
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 726 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 785
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 786 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 845
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 846 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 905
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 1066 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1125
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1126 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1185
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1186 QMLVQRGYESDPVKAW 1201
>gi|359080606|ref|XP_002698796.2| PREDICTED: DNA topoisomerase 2-beta [Bos taurus]
Length = 1707
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 723 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 782
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 783 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 842
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 843 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 902
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 1063 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1122
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1123 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1182
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1183 QMLVQRGYESDPVKAW 1198
>gi|332027283|gb|EGI67367.1| DNA topoisomerase 2 [Acromyrmex echinatior]
Length = 1552
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 133/180 (73%), Positives = 154/180 (85%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF NM RHRI F+Y G+ DD +I MAFSKK VD+RK WL M E +R
Sbjct: 654 GLGTSTAKEAKEYFENMSRHRIRFRYDGEQDDQNIIMAFSKKCVDQRKDWLMNHMNETKR 713
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RKE+G+GE YLY K T+ +++++FVN EL+L+SN DN RSIP++ DG KPG RKVLFTCL
Sbjct: 714 RKEIGLGERYLYEKETRDVSFSDFVNVELVLYSNYDNVRSIPNMMDGFKPGQRKVLFTCL 773
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAEHSAYHHGE SLM+TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 774 KRNDKREVKVAQLAGSVAEHSAYHHGETSLMATIVNLAQNFVGSNNINLLQPIGQFGTRL 833
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/145 (64%), Positives = 115/145 (79%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEY+TDT V F+V M+ DKL + E DGLHK FKLQTT+ I+SMCAFD L K+++
Sbjct: 995 DYKEYNTDTAVHFIVMMNRDKLVELERDGLHKTFKLQTTMTITSMCAFDENQCLNKYESV 1054
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
QILK FY VR++ Y KRKDYLEG+L AEA KL+NQARFI+EKCD L IEN+KKK+MIA
Sbjct: 1055 VQILKGFYKVRMDTYHKRKDYLEGILQAEAAKLSNQARFILEKCDSTLVIENKKKKDMIA 1114
Query: 339 ELIKRKYDSDPVKSWKMKQNKENAL 363
EL++R Y+SDPV SWK+ QN+E L
Sbjct: 1115 ELVRRNYESDPVVSWKLSQNREQVL 1139
>gi|291399726|ref|XP_002716252.1| PREDICTED: DNA topoisomerase II, beta isozyme-like [Oryctolagus
cuniculus]
Length = 1667
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 679 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 738
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTCL
Sbjct: 739 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCL 798
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
RND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 799 NRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 858
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 1019 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1078
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1079 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1138
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1139 QMLVQRGYESDPVKAW 1154
>gi|358422132|ref|XP_001254710.4| PREDICTED: DNA topoisomerase 2-beta [Bos taurus]
Length = 1908
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 634 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 693
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 694 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 753
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 754 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 813
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 974 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1033
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1034 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1093
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1094 QMLVQRGYESDPVKAW 1109
>gi|345327921|ref|XP_001507216.2| PREDICTED: DNA topoisomerase 2-beta-like [Ornithorhynchus anatinus]
Length = 1915
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 931 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 990
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 991 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCC 1050
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRNDRREVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 1051 KRNDRREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 1110
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/142 (60%), Positives = 109/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 1271 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1330
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY+ RK++L G+LGAE+ KL NQARFI+EK G + IENR K+++I
Sbjct: 1331 VQDILKEFFDLRLNYYSLRKEWLMGMLGAESTKLNNQARFILEKIQGKITIENRSKRDLI 1390
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L++R Y+SDPVK+WK Q K
Sbjct: 1391 QMLVQRGYESDPVKAWKEAQEK 1412
>gi|296472299|tpg|DAA14414.1| TPA: topoisomerase (DNA) II beta 180kDa [Bos taurus]
Length = 1707
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 723 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 782
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 783 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 842
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 843 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 902
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 1063 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1122
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1123 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1182
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1183 QMLVQRGYESDPVKAW 1198
>gi|157167886|ref|XP_001656143.1| DNA topoisomerase/gyrase [Aedes aegypti]
gi|108871009|gb|EAT35234.1| AAEL012584-PA, partial [Aedes aegypti]
Length = 1300
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/180 (77%), Positives = 151/180 (83%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF NMERHRILFKY DD I MAFSKK VD+RK WLT+ MEE R
Sbjct: 617 GLGTSTSKEAKEYFQNMERHRILFKYDSTQDDEAITMAFSKKCVDQRKEWLTSHMEENRH 676
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK++G+ E YLYTKTTKAITY EF+N EL+LFSN DN RSIP + DGLKPG RKV+FTC
Sbjct: 677 RKQVGLPERYLYTKTTKAITYKEFINLELVLFSNSDNIRSIPCMVDGLKPGQRKVMFTCF 736
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQSL TI+NLAQN+VGSNNINLL P GQFGT L
Sbjct: 737 KRNDKREVKVAQLAGSVAEMSAYHHGEQSLCGTIVNLAQNYVGSNNINLLVPSGQFGTRL 796
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/142 (55%), Positives = 106/142 (74%), Gaps = 4/142 (2%)
Query: 218 NDYKEYHTDTTVKFVVTMSP---DKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTK 274
++YKEY+TDTTV+FV++ P D+++ AE G H+VFKL ++++ SSM AFD L +
Sbjct: 957 SEYKEYNTDTTVRFVISFLPGEYDRIY-AEEGGFHRVFKLTSSISTSSMNAFDDKSYLKR 1015
Query: 275 FDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKK 334
+D N I E+Y +R+EYY KRK YLEG+L AEA +LT+QARFI+EKCD L +EN+K+K
Sbjct: 1016 YDHANDIFHEYYKLRIEYYGKRKAYLEGMLQAEADRLTDQARFIMEKCDRTLVVENKKRK 1075
Query: 335 EMIAELIKRKYDSDPVKSWKMK 356
MI ELIKR Y +DPVK WK K
Sbjct: 1076 VMIDELIKRGYRADPVKEWKRK 1097
>gi|358417405|ref|XP_001254458.3| PREDICTED: DNA topoisomerase 2-alpha [Bos taurus]
gi|359076890|ref|XP_002696055.2| PREDICTED: DNA topoisomerase 2-alpha [Bos taurus]
Length = 1530
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK D+RK WLT +ME+ R+
Sbjct: 615 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQTDDRKEWLTHFMEDRRQ 674
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ +DYLY + T +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 675 RKLLGLPDDYLYGQATTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 734
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 735 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 794
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 956 DYREYHTDTTVKFVVKMTEEKLAEAERAGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 1015
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1016 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1075
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1076 VLIQRGYDSDPVKAWKEAQQK 1096
>gi|113681126|ref|NP_001038656.1| DNA topoisomerase 2-beta [Danio rerio]
Length = 1618
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 135/186 (72%), Positives = 158/186 (84%)
Query: 3 TIHDVMIAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLT 62
T H GLGTSTSKEAKEYFS+MERHRI+FKY+G DDA I +AFSKK D+RK WLT
Sbjct: 627 TWHIKYYKGLGTSTSKEAKEYFSDMERHRIMFKYNGTEDDAAITLAFSKKKTDDRKEWLT 686
Query: 63 TWMEECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGS 122
+ME+ R+R+ G+ E YLY +T+ ++Y +F+NKELILFSN DNERSIPSL DGLKPG
Sbjct: 687 NFMEDRRQRRMHGLPEQYLYGTSTRHLSYNDFINKELILFSNSDNERSIPSLVDGLKPGQ 746
Query: 123 RKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQP 182
RKVLFTC+KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNN+N+LQP
Sbjct: 747 RKVLFTCVKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNVNILQP 806
Query: 183 IGQFGT 188
+GQFGT
Sbjct: 807 LGQFGT 812
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/142 (55%), Positives = 108/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQ++L +SM FD G + ++++
Sbjct: 975 SDYKEYHTDTTVKFVVRMTEEKLAQAEAAGLHKVFKLQSSLTCNSMVLFDHMGCMKRYES 1034
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
+ILKEF+ +RL YY RKD+L G LGAE+ KL+NQARF++EK +G L IEN+ K+++I
Sbjct: 1035 VQEILKEFFELRLHYYKLRKDWLVGSLGAESAKLSNQARFVLEKIEGKLSIENKSKRDLI 1094
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L++R Y+SDPV +W Q K
Sbjct: 1095 RMLVQRGYESDPVAAWNKAQEK 1116
>gi|126341720|ref|XP_001380856.1| PREDICTED: DNA topoisomerase 2-beta [Monodelphis domestica]
Length = 1756
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 134/180 (74%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 771 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 830
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 831 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 890
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 891 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNVNLLQPIGQFGTRL 950
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/136 (61%), Positives = 106/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 1111 SDYKEYHTDTTVKFVVKMTEEKLVQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1170
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY+ RK++L G+LGAE+ KL NQARFI+EK G + IENR K+++I
Sbjct: 1171 VQDILKEFFDLRLNYYSLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKRDLI 1230
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1231 QMLVQRGYESDPVKAW 1246
>gi|339717598|pdb|3QX3|A Chain A, Human Topoisomerase Iibeta In Complex With Dna And
Etoposide
gi|339717599|pdb|3QX3|B Chain B, Human Topoisomerase Iibeta In Complex With Dna And
Etoposide
Length = 803
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 213 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 272
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 273 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 332
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 333 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 392
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 108/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 553 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 612
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 613 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 672
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L++R Y+SDPVK+WK Q K
Sbjct: 673 QMLVQRGYESDPVKAWKEAQEK 694
>gi|395816620|ref|XP_003781796.1| PREDICTED: DNA topoisomerase 2-beta [Otolemur garnettii]
Length = 1613
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 134/180 (74%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEA+EYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 625 GLGTSTAKEAREYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 684
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 685 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 744
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 745 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 804
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/136 (61%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 965 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1024
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
IL+EF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1025 VQDILREFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1084
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1085 QMLVQRGYESDPVKAW 1100
>gi|28277299|gb|AAH44276.1| LOC398512 protein [Xenopus laevis]
Length = 1132
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 156/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++MERHRI FKY+G DDA I MAFS+K VD+RK WLT +M++ R
Sbjct: 613 GLGTSTSKEAKEYFADMERHRIPFKYAGPIDDAAITMAFSRKKVDDRKEWLTNFMQDRRE 672
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E+YLY K+TK +T+ +F+NKELILFSN DNERSIPSL DGLKPG RKVLFTC
Sbjct: 673 RRLHGLPEEYLYGKSTKYLTFNDFINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCF 732
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 733 KRNDKREVKVAQLAGSVAEMSAYHHGEISLMMTIINLAQNFVGSNNVNLLQPIGQFGTRL 792
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/141 (58%), Positives = 108/141 (76%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTDTTV+F+V M+ KL +AE GLHKVFKLQ +L +SM FD G L K++T
Sbjct: 954 DYKEYHTDTTVRFLVKMTEQKLAEAEAAGLHKVFKLQASLTCNSMVLFDHVGCLRKYETV 1013
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+EF+ +R++YY+ RKD+L G+L AEA KL+NQARFI+EK +G + IEN+ KKE+I
Sbjct: 1014 LDILREFFDLRVKYYSLRKDWLVGMLTAEASKLSNQARFILEKIEGKIVIENKPKKELIQ 1073
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
L++R YDSDPVK+WK Q K
Sbjct: 1074 MLVQRGYDSDPVKTWKQTQEK 1094
>gi|351705039|gb|EHB07958.1| DNA topoisomerase 2-beta [Heterocephalus glaber]
Length = 1917
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 957 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 1016
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 1017 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 1076
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 1077 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 1136
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 1297 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1356
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1357 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1416
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1417 QMLVQRGYESDPVKAW 1432
>gi|301605654|ref|XP_002932456.1| PREDICTED: DNA topoisomerase 2-beta [Xenopus (Silurana) tropicalis]
Length = 1557
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 134/180 (74%), Positives = 156/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI+F+Y+G DDA I +AFSKK VD+RK WLT +ME+ R+
Sbjct: 537 GLGTSTSKEAKEYFADMDRHRIIFRYAGPEDDAAITLAFSKKKVDDRKEWLTNFMEDRRQ 596
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DGLKPG RKVLFTC
Sbjct: 597 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCF 656
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNN++LLQPIGQFGT L
Sbjct: 657 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNVSLLQPIGQFGTRL 716
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/142 (57%), Positives = 108/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K++T
Sbjct: 877 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTSLTCNSMVLFDHMGCLKKYET 936
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAEA +L NQARF++EK G + IEN+ K+++I
Sbjct: 937 VQDILKEFFDLRLNYYTLRKEWLIGMLGAEAARLNNQARFVLEKIQGKISIENKTKRDLI 996
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L+++ ++SDPVK+WK Q K
Sbjct: 997 QMLVQKGFESDPVKAWKEAQEK 1018
>gi|194383172|dbj|BAG59142.1| unnamed protein product [Homo sapiens]
Length = 1178
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 555 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 614
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 615 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 674
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 675 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 734
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 108/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 895 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 954
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 955 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 1014
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L++R Y+SDPVK+WK Q K
Sbjct: 1015 QMLVQRGYESDPVKAWKEAQEK 1036
>gi|348588584|ref|XP_003480045.1| PREDICTED: DNA topoisomerase 2-beta-like [Cavia porcellus]
Length = 1991
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 1003 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 1062
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 1063 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 1122
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 1123 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 1182
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 1343 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1402
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 1403 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESAKLNNQARFILEKIQGKITIENRSKKDLI 1462
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1463 QMLVQRGYESDPVKAW 1478
>gi|296476435|tpg|DAA18550.1| TPA: topoisomerase (DNA) II alpha 170kDa [Bos taurus]
Length = 1338
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 136/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK D+RK WLT +ME+ R+
Sbjct: 580 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQTDDRKEWLTHFMEDRRQ 639
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ +DYLY + T +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 640 RKLLGLPDDYLYGQATTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 699
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 700 KRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 759
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 921 DYREYHTDTTVKFVVKMTEEKLAEAERAGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 980
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 981 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1040
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1041 VLIQRGYDSDPVKAWKEAQQK 1061
>gi|324500558|gb|ADY40259.1| DNA topoisomerase 2 [Ascaris suum]
Length = 1586
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 131/180 (72%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M RHRI F+Y+GD DD+ I MAFSK+ +++RK WLT WM E R
Sbjct: 669 GLGTSTSKEAKEYFTDMARHRIRFRYAGDEDDSSIDMAFSKRKIEDRKVWLTNWMAEKRD 728
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E G+ E+YLY K T++I++ +FVNKEL+LFSN DNERSIPSL DGLKPG RKVLFTC
Sbjct: 729 RREQGLTEEYLYDKDTRSISFKDFVNKELVLFSNADNERSIPSLVDGLKPGQRKVLFTCF 788
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR D++EVKVAQLAG+V E SAYHHGEQSLMSTI+NLAQ++VGSNNINLL PIGQFGT L
Sbjct: 789 KRADKKEVKVAQLAGAVGEMSAYHHGEQSLMSTIVNLAQDYVGSNNINLLLPIGQFGTRL 848
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 108/165 (65%)
Query: 195 STNLSGAVVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKL 254
+ N +V+ L GS D+KEYHTDTTV+FV+ MS KL AEM+GLHKVFKL
Sbjct: 986 TQNYKESVLEPLLEGSDKQPALIQDFKEYHTDTTVRFVIKMSAQKLRDAEMEGLHKVFKL 1045
Query: 255 QTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQ 314
QT + SSM FD G L KF +I KEF+ R + Y +RK + EG+L A++ +L+NQ
Sbjct: 1046 QTAINTSSMVLFDAAGCLRKFRNVEEICKEFFETRKKKYIERKAFQEGMLRAQSERLSNQ 1105
Query: 315 ARFIVEKCDGDLRIENRKKKEMIAELIKRKYDSDPVKSWKMKQNK 359
ARFI+ K G++ IEN++K ++ +L+K+ +D DPVK WK Q +
Sbjct: 1106 ARFILAKIKGEILIENKRKVAIVEQLVKKGFDPDPVKKWKELQRR 1150
>gi|339810|gb|AAA61210.1| topoisomerase II, partial [Homo sapiens]
Length = 886
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 488 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 547
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 548 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCF 607
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 608 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 667
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 46/59 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++
Sbjct: 828 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYE 886
>gi|344288185|ref|XP_003415831.1| PREDICTED: DNA topoisomerase 2-beta-like [Loxodonta africana]
Length = 1742
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 134/180 (74%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 754 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 813
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVL+TC
Sbjct: 814 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLYTCF 873
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 874 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 933
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/136 (61%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 1094 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 1153
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR K+++I
Sbjct: 1154 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESSKLNNQARFILEKIQGKITIENRSKRDLI 1213
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1214 QMLVQRGYESDPVKAW 1229
>gi|432882842|ref|XP_004074154.1| PREDICTED: DNA topoisomerase 2-beta-like [Oryzias latipes]
Length = 1599
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 134/178 (75%), Positives = 153/178 (85%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++MERHRI F+Y G DDA I +AFSKK D+RK WLT +ME+ R+
Sbjct: 625 GLGTSTSKEAKEYFADMERHRITFRYQGAEDDAAITLAFSKKKTDDRKEWLTNFMEDRRQ 684
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E YLY TK ++Y +F+NKELILFSN DNERSIPSL DGLKPG RKVLFTCL
Sbjct: 685 RRMHGLPEKYLYGTQTKHLSYNDFINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCL 744
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNIN+LQP+GQFGT
Sbjct: 745 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINILQPLGQFGT 802
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 81/142 (57%), Positives = 106/142 (74%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
NDYKEYHTD+TVKFVV MS +KL +AE GLHKVFKLQ++L +SM FD G L ++D+
Sbjct: 965 NDYKEYHTDSTVKFVVRMSEEKLAQAEAVGLHKVFKLQSSLTCNSMVLFDHMGCLKRYDS 1024
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL Y RKD+L G LGAEA KL+NQARF++EK +G + IEN+ K+E+I
Sbjct: 1025 VQDILKEFFELRLHYCKLRKDWLLGSLGAEAAKLSNQARFVLEKIEGKISIENKSKRELI 1084
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L+++ Y+SDPV +W Q K
Sbjct: 1085 RMLVQKGYESDPVAAWSKAQEK 1106
>gi|324500526|gb|ADY40245.1| DNA topoisomerase 2 [Ascaris suum]
Length = 1388
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 131/180 (72%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M RHRI F+Y+GD DD+ I MAFSK+ +++RK WLT WM E R
Sbjct: 669 GLGTSTSKEAKEYFTDMARHRIRFRYAGDEDDSSIDMAFSKRKIEDRKVWLTNWMAEKRD 728
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E G+ E+YLY K T++I++ +FVNKEL+LFSN DNERSIPSL DGLKPG RKVLFTC
Sbjct: 729 RREQGLTEEYLYDKDTRSISFKDFVNKELVLFSNADNERSIPSLVDGLKPGQRKVLFTCF 788
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR D++EVKVAQLAG+V E SAYHHGEQSLMSTI+NLAQ++VGSNNINLL PIGQFGT L
Sbjct: 789 KRADKKEVKVAQLAGAVGEMSAYHHGEQSLMSTIVNLAQDYVGSNNINLLLPIGQFGTRL 848
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 109/166 (65%)
Query: 195 STNLSGAVVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKL 254
+ N +V+ L GS D+KEYHTDTTV+FV+ MS KL AEM+GLHKVFKL
Sbjct: 986 TQNYKESVLEPLLEGSDKQPALIQDFKEYHTDTTVRFVIKMSAQKLRDAEMEGLHKVFKL 1045
Query: 255 QTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQ 314
QT + SSM FD G L KF +I KEF+ R + Y +RK + EG+L A++ +L+NQ
Sbjct: 1046 QTAINTSSMVLFDAAGCLRKFRNVEEICKEFFETRKKKYIERKAFQEGMLRAQSERLSNQ 1105
Query: 315 ARFIVEKCDGDLRIENRKKKEMIAELIKRKYDSDPVKSWKMKQNKE 360
ARFI+ K G++ IEN++K ++ +L+K+ +D DPVK WK Q ++
Sbjct: 1106 ARFILAKIKGEILIENKRKVAIVEQLVKKGFDPDPVKKWKELQRRK 1151
>gi|327283546|ref|XP_003226502.1| PREDICTED: DNA topoisomerase 2-beta-like [Anolis carolinensis]
Length = 1640
Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 133/180 (73%), Positives = 155/180 (86%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 648 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 707
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC
Sbjct: 708 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCC 767
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNN++LLQPIGQFGT L
Sbjct: 768 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNVSLLQPIGQFGTRL 827
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K++T
Sbjct: 988 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTSLTCNSMVLFDHMGCLKKYET 1047
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IEN+ K+++I
Sbjct: 1048 VQDILKEFFDLRLNYYNLRKEWLAGILGAESTKLNNQARFILEKIQGKIAIENKSKRDLI 1107
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 1108 QLLVQRGYESDPVKAW 1123
>gi|45382161|ref|NP_990122.1| DNA topoisomerase 2-alpha [Gallus gallus]
gi|13959708|sp|O42130.2|TOP2A_CHICK RecName: Full=DNA topoisomerase 2-alpha; AltName: Full=DNA
topoisomerase II, alpha isozyme
gi|6714553|dbj|BAA22539.2| DNA topoisomeraseII_alpha [Gallus gallus]
Length = 1553
Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 137/180 (76%), Positives = 152/180 (84%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M RHRI FKYSG DDA I +AFSKK V+ERK WLT +ME+ R+
Sbjct: 616 GLGTSTSKEAKEYFADMARHRIGFKYSGPEDDAAITLAFSKKKVEERKEWLTNFMEDRRQ 675
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R G+ EDYLY K T +TY +F+NKEL+LFSN DNERSIPSL DGLKPG RKVLFTC
Sbjct: 676 RNVHGLPEDYLYGKDTNYLTYNDFINKELVLFSNSDNERSIPSLVDGLKPGQRKVLFTCF 735
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVK AQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 736 KRNDKREVKGAQLAGSVAEMSSYHHGEASLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 795
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 89/141 (63%), Positives = 108/141 (76%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTDTTVKFVV MS +KL +AE GLHKVFKLQT L +SM FD G L K+++
Sbjct: 957 DYKEYHTDTTVKFVVKMSEEKLAEAEAVGLHKVFKLQTNLTCNSMVLFDHVGFLKKYESP 1016
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1017 QDILKEFFELRLRYYGLRKEWLIGMLGAESAKLNNQARFILEKIDGKIVIENKPKKELIQ 1076
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R Y+SDPVK+WK QNK
Sbjct: 1077 VLIQRGYESDPVKAWKELQNK 1097
>gi|327275489|ref|XP_003222506.1| PREDICTED: DNA topoisomerase 2-alpha-like [Anolis carolinensis]
Length = 1559
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/180 (75%), Positives = 154/180 (85%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF+ M RHRI FKYSG DDA I +AFSKK +D+RK WLT++ME+ R+
Sbjct: 618 GLGTSTSKEAKEYFAEMTRHRIPFKYSGPEDDAAITLAFSKKKIDDRKEWLTSFMEDRRQ 677
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK G+ + YLY K+T +TY +F+NKEL+LFSN DNERSIPSL DGLKPG RKVLFTC
Sbjct: 678 RKLHGLPDVYLYGKSTTYLTYNDFINKELVLFSNSDNERSIPSLVDGLKPGQRKVLFTCF 737
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 738 KRNDKREVKVAQLAGSVAEMSSYHHGETSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 797
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 107/141 (75%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTDTTV+FV+ MS KL +AE GLHKVFKLQ++LA +M FD G L K++T
Sbjct: 959 DYKEYHTDTTVRFVIKMSEQKLAEAEAAGLHKVFKLQSSLACPNMVLFDHIGCLKKYETA 1018
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+EFY +RL YY+ RKD+L G+LGAE+ KL NQARFI+EK +G + IEN+ KKE+I
Sbjct: 1019 EDILREFYELRLRYYSLRKDWLVGMLGAESAKLNNQARFILEKIEGKIVIENKPKKELIK 1078
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK WK Q K
Sbjct: 1079 VLIQRGYDSDPVKKWKESQQK 1099
>gi|195438268|ref|XP_002067059.1| GK24224 [Drosophila willistoni]
gi|194163144|gb|EDW78045.1| GK24224 [Drosophila willistoni]
Length = 1453
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 138/188 (73%), Positives = 155/188 (82%)
Query: 3 TIHDVMIAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLT 62
T H GLGTSTSKEAKEYF +MERHRILFKY G DD +I MAFSKK VD RKTWLT
Sbjct: 590 TYHIKYYKGLGTSTSKEAKEYFQDMERHRILFKYDGQADDDNIVMAFSKKHVDSRKTWLT 649
Query: 63 TWMEECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGS 122
M+E +RRK++ + E YLYTK TK ITY++F+N EL+LFSN DNERSIPSL DGLKPG
Sbjct: 650 NHMDEVKRRKQLNLPERYLYTKGTKHITYSDFINLELVLFSNSDNERSIPSLVDGLKPGQ 709
Query: 123 RKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQP 182
RKV+FTC KRND+REVKVAQL+GSVAE SAYHHGE SL TI+NLAQN+VGSNNINLL+P
Sbjct: 710 RKVMFTCFKRNDKREVKVAQLSGSVAEMSAYHHGEVSLQMTIVNLAQNYVGSNNINLLEP 769
Query: 183 IGQFGTFL 190
GQFGT L
Sbjct: 770 RGQFGTRL 777
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 109/155 (70%), Gaps = 2/155 (1%)
Query: 202 VVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLHK--AEMDGLHKVFKLQTTLA 259
V+ L G+ + ++Y+EYHTDTTV+FVV+ +P + ++ +E G ++VFKL ++L+
Sbjct: 922 VLEVLSNGTDKVKAVVSEYREYHTDTTVRFVVSFAPGEFNRLRSEEGGFYRVFKLTSSLS 981
Query: 260 ISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIV 319
+ M AFD+ L +F ++ ILKEFY +R+EYY +RKDYL G L A+A +L++QARFI+
Sbjct: 982 TNQMHAFDQSNCLRRFPSSIDILKEFYTLRVEYYCRRKDYLVGQLTAQADRLSDQARFIL 1041
Query: 320 EKCDGDLRIENRKKKEMIAELIKRKYDSDPVKSWK 354
EKC+ L +EN+++K M EL KR Y DPVK W+
Sbjct: 1042 EKCEKTLVVENKQRKAMCEELAKRGYRPDPVKEWQ 1076
>gi|10121857|gb|AAG13401.1|AF285155_1 topoisomerase II alpha-2 [Gallus gallus]
Length = 1586
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 137/180 (76%), Positives = 152/180 (84%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M RHRI FKYSG DDA I +AFSKK V+ERK WLT +ME+ R+
Sbjct: 651 GLGTSTSKEAKEYFADMARHRIGFKYSGPEDDAAITLAFSKKKVEERKEWLTNFMEDRRQ 710
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R G+ EDYLY K T +TY +F+NKEL+LFSN DNERSIPSL DGLKPG RKVLFTC
Sbjct: 711 RNVHGLPEDYLYGKDTNYLTYNDFINKELVLFSNSDNERSIPSLVDGLKPGQRKVLFTCF 770
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVK AQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 771 KRNDKREVKGAQLAGSVAEMSSYHHGEASLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 830
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 89/141 (63%), Positives = 108/141 (76%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTDTTVKFVV MS +KL +AE GLHKVFKLQT L +SM FD G L K+++
Sbjct: 992 DYKEYHTDTTVKFVVKMSEEKLAEAEAVGLHKVFKLQTNLTCNSMVLFDHVGFLKKYESP 1051
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1052 QDILKEFFELRLRYYGLRKEWLIGMLGAESAKLNNQARFILEKIDGKIVIENKPKKELIQ 1111
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R Y+SDPVK+WK QNK
Sbjct: 1112 VLIQRGYESDPVKAWKELQNK 1132
>gi|449491151|ref|XP_002193920.2| PREDICTED: DNA topoisomerase 2-alpha [Taeniopygia guttata]
Length = 1541
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 154/180 (85%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M +HRI FKYSG DDA I +AFSKK ++ERK WLT +ME+ R+
Sbjct: 615 GLGTSTSKEAKEYFADMAKHRIGFKYSGPEDDAAITLAFSKKKIEERKEWLTNFMEDRRQ 674
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK G+ E+YLY K T +TY +F+NKEL+LFSN DNERSIPSL DGLKPG RKVLFTC
Sbjct: 675 RKLHGLPEEYLYGKNTDYLTYNDFINKELVLFSNSDNERSIPSLVDGLKPGQRKVLFTCF 734
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE S+YHHGE +LM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 735 KRNDKREVKVAQLAGSVAEMSSYHHGEAALMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 794
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 89/142 (62%), Positives = 111/142 (78%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTDTTV+FVV M+ DKL +AE GLHKVFKLQT+L +SM FD G L K+D+
Sbjct: 956 DYKEYHTDTTVRFVVKMTEDKLAEAEAVGLHKVFKLQTSLTCNSMVLFDHVGFLKKYDSP 1015
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILKEF+ +RL YY RK++L G+LGAE+ KL+NQARFI+EK DG + IEN+ KKE+I
Sbjct: 1016 QDILKEFFELRLRYYNLRKEWLIGMLGAESAKLSNQARFILEKIDGKIVIENKPKKELIQ 1075
Query: 339 ELIKRKYDSDPVKSWKMKQNKE 360
LI+R Y+SDPVK+WK QNK+
Sbjct: 1076 VLIQRGYESDPVKAWKEAQNKD 1097
>gi|383858079|ref|XP_003704530.1| PREDICTED: DNA topoisomerase 2-like [Megachile rotundata]
Length = 1497
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 131/180 (72%), Positives = 154/180 (85%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF NM RHRI F+Y G+ DD +I MAFS+K VD+RK WL M+E +R
Sbjct: 605 GLGTSTAKEAKEYFENMARHRIRFRYDGEQDDQNIIMAFSRKCVDQRKDWLMNHMDETKR 664
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RKE+G+GE YLY K T+ +T+++F+N EL+L+SN DN RSIP++ DG KPG RKV++TCL
Sbjct: 665 RKEIGLGERYLYEKDTRTVTFSDFINVELVLYSNYDNVRSIPNMIDGFKPGQRKVVYTCL 724
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAEHSAYHHGE SLMSTIINLAQNFVGSNNINLLQ IGQFGT L
Sbjct: 725 KRNDKREVKVAQLAGSVAEHSAYHHGETSLMSTIINLAQNFVGSNNINLLQSIGQFGTRL 784
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/201 (49%), Positives = 140/201 (69%), Gaps = 9/201 (4%)
Query: 164 IINLAQNFVGSNNINLLQ-PIGQFGTFLFIFESTNLSGAVVNALDFGSGGWRFESNDYKE 222
+I+ + +G + + + + P+G T+ +++ T V+ + G+ NDYKE
Sbjct: 898 VISGEISVIGPDKVEITELPVG---TWTQVYKET-----VLEPMLHGTDKTPAVINDYKE 949
Query: 223 YHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQIL 282
Y+TDT+V F+V ++ DKL + E DGLHK FKLQTT+ ++SMCAFD L K+D+ QIL
Sbjct: 950 YNTDTSVHFIVILNRDKLVELERDGLHKAFKLQTTMTVTSMCAFDENQCLQKYDSALQIL 1009
Query: 283 KEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIK 342
+ F+ VRLE Y KRK YLEG+L AEA KL+NQARF++EKCDG L IEN+KKK+MIAEL+
Sbjct: 1010 RCFFKVRLEMYHKRKAYLEGILQAEASKLSNQARFVLEKCDGSLVIENKKKKDMIAELVA 1069
Query: 343 RKYDSDPVKSWKMKQNKENAL 363
R Y+SDPV +WK+ QN+E L
Sbjct: 1070 RGYESDPVVAWKLSQNREEVL 1090
>gi|195031277|ref|XP_001988321.1| GH10628 [Drosophila grimshawi]
gi|193904321|gb|EDW03188.1| GH10628 [Drosophila grimshawi]
Length = 1486
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 134/180 (74%), Positives = 154/180 (85%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF +MERHRILFKY G DD +I MAF+KK VD RKTWLT M+E +R
Sbjct: 612 GLGTSTSKEAKEYFQDMERHRILFKYDGQVDDDNIVMAFAKKHVDSRKTWLTNHMDEVKR 671
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK++G+ E YLYTK TK ++Y++F+N EL+LFSN DNERSIPSL DGLKPG RKV+FTC
Sbjct: 672 RKQLGLPERYLYTKGTKQVSYSDFINLELVLFSNADNERSIPSLVDGLKPGQRKVMFTCF 731
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQL+GSVAE SAYHHGE SL TI+NLAQN+VGSNNINLL+P GQFGT L
Sbjct: 732 KRNDKREVKVAQLSGSVAEMSAYHHGEVSLQMTIVNLAQNYVGSNNINLLEPRGQFGTRL 791
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 109/157 (69%), Gaps = 2/157 (1%)
Query: 202 VVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLHK--AEMDGLHKVFKLQTTLA 259
V+ AL G+ + ++Y+E+HTDTTV+FVV+ +P + + +E G H+VFKL ++++
Sbjct: 936 VLEALSNGTEKVKAIVSEYREFHTDTTVRFVVSFNPGEFERLRSENGGFHRVFKLSSSIS 995
Query: 260 ISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIV 319
+ M AFD L +F + IL EFY +RLEYY +RKDYL G L A+A +L++QARFI+
Sbjct: 996 TNQMHAFDDSNCLRRFSSPKDILLEFYKLRLEYYNRRKDYLVGQLTAQADRLSDQARFIL 1055
Query: 320 EKCDGDLRIENRKKKEMIAELIKRKYDSDPVKSWKMK 356
EKC+ L +EN+++K MI ELIKR Y DPVK W+ +
Sbjct: 1056 EKCEKKLVVENKQRKVMIDELIKRGYRPDPVKEWQRR 1092
>gi|195119011|ref|XP_002004025.1| GI19824 [Drosophila mojavensis]
gi|193914600|gb|EDW13467.1| GI19824 [Drosophila mojavensis]
Length = 1431
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 134/180 (74%), Positives = 154/180 (85%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF +MERHRILFKY G DD +I MAF+KK V+ RKTWLT M+E +R
Sbjct: 595 GLGTSTSKEAKEYFQDMERHRILFKYDGQVDDDNIVMAFAKKHVESRKTWLTNHMDEVKR 654
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK++G+ E YLYTK TK ++Y++F+N EL+LFSN DNERSIPSL DGLKPG RKV+FTC
Sbjct: 655 RKQLGLPERYLYTKGTKHVSYSDFINLELVLFSNADNERSIPSLVDGLKPGQRKVMFTCF 714
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQL+GSVAE SAYHHGE SL TI+NLAQNFVGSNNINLL+P GQFGT L
Sbjct: 715 KRNDKREVKVAQLSGSVAEMSAYHHGEMSLQMTIVNLAQNFVGSNNINLLEPRGQFGTRL 774
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 120/197 (60%), Gaps = 19/197 (9%)
Query: 171 FVGSNNINLLQ---------PIGQFGTFLFIFESTNLSGAVVNALDFGSGGWRFESNDYK 221
+V S N+ +L PIG + + N V+ L G+ + +DY+
Sbjct: 887 YVHSGNVQILPDNRIEITELPIGVW--------TQNYKENVLEVLSNGTEKVKAIISDYR 938
Query: 222 EYHTDTTVKFVVTMSPDKLHK--AEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTN 279
EYHTDTTV+FV+T +P + + +E G H+V KL ++++ + M AFD L +F T
Sbjct: 939 EYHTDTTVRFVITFAPGEFERLRSEEGGFHRVLKLSSSISTNQMHAFDENNCLRRFPTPK 998
Query: 280 QILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAE 339
IL EFY +RLEYY +RKDYL G L A+A +L++QARFI+EKC+ L IEN+++K MI E
Sbjct: 999 DILVEFYKLRLEYYNRRKDYLVGQLTAQADRLSDQARFILEKCEKKLVIENKQRKMMIDE 1058
Query: 340 LIKRKYDSDPVKSWKMK 356
LIKR Y DPVK W+ +
Sbjct: 1059 LIKRGYRPDPVKEWQRR 1075
>gi|308510362|ref|XP_003117364.1| CRE-TOP-2 protein [Caenorhabditis remanei]
gi|308242278|gb|EFO86230.1| CRE-TOP-2 protein [Caenorhabditis remanei]
Length = 1547
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 132/180 (73%), Positives = 150/180 (83%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYFS+M RHRI FKY G DD + MAFSKK +DERK WLT WM+E +
Sbjct: 633 GLGTSTSKEAKEYFSDMLRHRIKFKYGGAEDDMAVEMAFSKKKIDERKDWLTKWMQEKKA 692
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK G+ E+YLY K T+A+T+ +FVN+EL+LFSN+DNERSIP L DG KPG RKVLF C
Sbjct: 693 RKLRGLAEEYLYNKDTRAVTFKDFVNRELVLFSNLDNERSIPCLVDGFKPGQRKVLFACF 752
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR D+REVKVAQLAG+VAE SAYHHGEQSLM TI+NLAQ+FVGSNNINLL PIGQFGT L
Sbjct: 753 KRADKREVKVAQLAGAVAEISAYHHGEQSLMGTIVNLAQDFVGSNNINLLLPIGQFGTRL 812
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 98/140 (70%), Gaps = 1/140 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEM-DGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
DYKEYHTDTTVKFVV ++P KL + E + LH+VFKLQ+ + + M FD G L + +
Sbjct: 976 DYKEYHTDTTVKFVVKLAPGKLRELERGEDLHQVFKLQSVINTTCMVLFDAAGCLRTYSS 1035
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
+I +EFY R E Y +RKDYL GVL A++ +LTNQARFIV K + ++ +EN+KK ++
Sbjct: 1036 PEEITQEFYDCRKEKYIQRKDYLLGVLQAQSQRLTNQARFIVAKINNEIVMENKKKAVIV 1095
Query: 338 AELIKRKYDSDPVKSWKMKQ 357
LIK K+D DPVK WK +Q
Sbjct: 1096 ETLIKMKFDPDPVKKWKEEQ 1115
>gi|195345101|ref|XP_002039114.1| Top2 [Drosophila sechellia]
gi|194134244|gb|EDW55760.1| Top2 [Drosophila sechellia]
Length = 1448
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 152/180 (84%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF +MERHRILFKY G DD I MAFSKK ++ RK WLT M+E +R
Sbjct: 595 GLGTSTSKEAKEYFQDMERHRILFKYDGSVDDESIIMAFSKKHIESRKVWLTNHMDEVKR 654
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RKE+G+ E YLYTK TK+ITY +F+N EL+LFSN DNERSIPSL DGLKPG RKV+FTC
Sbjct: 655 RKELGLPERYLYTKGTKSITYADFINLELVLFSNADNERSIPSLVDGLKPGQRKVMFTCF 714
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQL+GSVAE SAYHHGE SL TI+NLAQNFVG+NNINLL+P GQFGT L
Sbjct: 715 KRNDKREVKVAQLSGSVAEMSAYHHGEVSLQMTIVNLAQNFVGANNINLLEPRGQFGTRL 774
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 112/164 (68%), Gaps = 2/164 (1%)
Query: 195 STNLSGAVVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLHK--AEMDGLHKVF 252
+ N V+ AL G+ + ++YKEYHTDTTV+FV++ +P + + AE G H+VF
Sbjct: 912 TQNYKENVLEALSNGTEKVKAVVSEYKEYHTDTTVRFVISFAPGEFERIRAEEGGFHRVF 971
Query: 253 KLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLT 312
KL TTL+ + M AFD+ L +F T ILKEFY +R EYYA+R+D+L G L A+A +L+
Sbjct: 972 KLTTTLSTNQMHAFDQNNCLRRFPTAIDILKEFYKLRREYYARRRDFLVGQLTAQADRLS 1031
Query: 313 NQARFIVEKCDGDLRIENRKKKEMIAELIKRKYDSDPVKSWKMK 356
+QARFI+EKC+ L +EN+++K M EL+KR Y DPVK W+ +
Sbjct: 1032 DQARFILEKCEKKLVVENKQRKAMCDELLKRGYRPDPVKEWQRR 1075
>gi|341880169|gb|EGT36104.1| hypothetical protein CAEBREN_03194 [Caenorhabditis brenneri]
Length = 1547
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 129/180 (71%), Positives = 153/180 (85%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYFS+M RHRI FKY G +DDA + MAFSKK ++ERK WLT WM+E +
Sbjct: 650 GLGTSTSKEAKEYFSDMLRHRIRFKYGGGDDDAAVDMAFSKKKIEERKDWLTKWMQEKKV 709
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK+ G+ ++YLY K T++++Y +FVN+EL+LFSN+DNERSIP L DG KPG RKVLF C
Sbjct: 710 RKQQGLADEYLYNKDTRSVSYKDFVNRELVLFSNLDNERSIPCLVDGFKPGQRKVLFACF 769
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR D+REVKVAQLAG+VAE SAYHHGEQSLM TI+NLAQ+FVGSNN+NLL PIGQFGT L
Sbjct: 770 KRADKREVKVAQLAGAVAELSAYHHGEQSLMGTIVNLAQDFVGSNNVNLLLPIGQFGTRL 829
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/140 (49%), Positives = 95/140 (67%), Gaps = 1/140 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDG-LHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
DYKEYHTD TVKFVV ++P KL + E LH+VFKLQ + + M FD G L + +
Sbjct: 991 DYKEYHTDITVKFVVKLTPGKLRELERSQELHQVFKLQQVINTTCMVLFDAAGCLRTYTS 1050
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
+I +EF+ R E Y +RK+YL GVL A++ +LTNQARFI+ K + ++ +EN+KK ++
Sbjct: 1051 PEEICQEFFECRKEKYIQRKEYLVGVLEAQSKRLTNQARFILAKINNEIVLENKKKASIV 1110
Query: 338 AELIKRKYDSDPVKSWKMKQ 357
LIK K+D DPVK WK +Q
Sbjct: 1111 ETLIKMKFDPDPVKKWKEEQ 1130
>gi|410911494|ref|XP_003969225.1| PREDICTED: DNA topoisomerase 2-beta-like [Takifugu rubripes]
Length = 1605
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 131/178 (73%), Positives = 152/178 (85%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF+ ME+HRI F+YSG DDA I +AFSKK D+RK WLT +ME+ R+
Sbjct: 625 GLGTSTSKEAKEYFAEMEKHRITFRYSGAEDDAAITLAFSKKKTDDRKEWLTNFMEDRRQ 684
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E YLY + ++Y +F+NKELILFSN DNERSIPSL DGLKPG RKVLFTCL
Sbjct: 685 RRMHGLPEQYLYGSQARHLSYNDFINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCL 744
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNN+N+LQP+GQFGT
Sbjct: 745 KRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNLNILQPLGQFGT 802
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/142 (55%), Positives = 107/142 (75%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
NDYKEYHTDTTVKF+V MS +KL +AE GLHKVFKLQ++L +SM FD G + ++++
Sbjct: 965 NDYKEYHTDTTVKFLVRMSEEKLAQAESVGLHKVFKLQSSLTCNSMVLFDHMGCMKRYES 1024
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RKD+L G LGAEA KL+NQARF++EK +G + IEN+ K+E+I
Sbjct: 1025 VQDILKEFFELRLHYYKLRKDWLVGSLGAEAAKLSNQARFVLEKIEGKVSIENKSKRELI 1084
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L+++ ++SDPV +W Q K
Sbjct: 1085 RMLVQKGFESDPVAAWTKAQEK 1106
>gi|170047758|ref|XP_001851377.1| DNA topoisomerase 2 [Culex quinquefasciatus]
gi|167870064|gb|EDS33447.1| DNA topoisomerase 2 [Culex quinquefasciatus]
Length = 1358
Score = 283 bits (725), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 137/180 (76%), Positives = 149/180 (82%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF NMERHRILF Y DD I MAF+KK VD+RK WLT MEE R
Sbjct: 632 GLGTSTSKEAKEYFQNMERHRILFTYDTSTDDDAITMAFAKKCVDQRKEWLTAHMEENRH 691
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ E YLYTKTT+AI+Y EF+N EL+LFSN DN RSIP + DGLKPG RKV+FTC
Sbjct: 692 RKLVGLPERYLYTKTTRAISYKEFINLELVLFSNSDNVRSIPCVLDGLKPGQRKVMFTCF 751
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGEQSL STI+NLAQNFVGSNNINLL P GQFGT L
Sbjct: 752 KRNDKREVKVAQLAGSVAEMSAYHHGEQSLCSTIVNLAQNFVGSNNINLLYPGGQFGTRL 811
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 127/201 (63%), Gaps = 21/201 (10%)
Query: 168 AQNFVGSNNINLLQ---------PIGQFGTFLFIFESTNLSGAVVNALDFGSGGWRFESN 218
Q ++ N++LL+ PIG T+ +++ L L GS + +
Sbjct: 921 PQKYLTVGNLSLLENQKIEISELPIG---TWTQVYKENTLE-----PLLHGSEKQKAVIS 972
Query: 219 DYKEYHTDTTVKFVVTMSP---DKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKF 275
DYKEY+TDTTV+FVV+ P DKL+ AE G H+VFKL ++++ + M AFD L ++
Sbjct: 973 DYKEYNTDTTVRFVVSFLPGEFDKLY-AEDGGFHRVFKLTSSISTTCMHAFDDKNYLRRY 1031
Query: 276 DTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKE 335
+ N I +E+Y +RL++Y KRK YLEG+L AEA +LT+QARFI+EKCD L +EN+K+K
Sbjct: 1032 EHANDIFQEYYKIRLDFYHKRKAYLEGMLQAEADRLTDQARFIMEKCDRTLVVENKKRKV 1091
Query: 336 MIAELIKRKYDSDPVKSWKMK 356
MI ELIKR Y DPVK WK K
Sbjct: 1092 MIDELIKRGYRPDPVKEWKRK 1112
>gi|17136538|ref|NP_476760.1| topoisomerase 2, isoform A [Drosophila melanogaster]
gi|442628399|ref|NP_001260580.1| topoisomerase 2, isoform B [Drosophila melanogaster]
gi|135995|sp|P15348.1|TOP2_DROME RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
II
gi|8711|emb|CAA43523.1| DNA topoisomerase type II [Drosophila melanogaster]
gi|22946840|gb|AAF53802.2| topoisomerase 2, isoform A [Drosophila melanogaster]
gi|440213938|gb|AGB93115.1| topoisomerase 2, isoform B [Drosophila melanogaster]
Length = 1447
Score = 283 bits (725), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 134/180 (74%), Positives = 152/180 (84%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF +M+RHRILFKY G DD I MAFSKK ++ RK WLT M+E +R
Sbjct: 595 GLGTSTSKEAKEYFQDMDRHRILFKYDGSVDDESIVMAFSKKHIESRKVWLTNHMDEVKR 654
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RKE+G+ E YLYTK TK+ITY +F+N EL+LFSN DNERSIPSL DGLKPG RKV+FTC
Sbjct: 655 RKELGLPERYLYTKGTKSITYADFINLELVLFSNADNERSIPSLVDGLKPGQRKVMFTCF 714
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQL+GSVAE SAYHHGE SL TI+NLAQNFVG+NNINLL+P GQFGT L
Sbjct: 715 KRNDKREVKVAQLSGSVAEMSAYHHGEVSLQMTIVNLAQNFVGANNINLLEPRGQFGTRL 774
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 103/141 (73%), Gaps = 2/141 (1%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHK--AEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKF 275
++Y+EYHTDTTV+FV++ +P + + AE G ++VFKL TTL+ + M AFD+ L +F
Sbjct: 935 SEYREYHTDTTVRFVISFAPGEFERIHAEEGGFYRVFKLTTTLSTNQMHAFDQNNCLRRF 994
Query: 276 DTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKE 335
T ILKE+Y +R EYYA+R+D+L G L A+A +L++QARFI+EKC+ L +EN+++K
Sbjct: 995 PTAIDILKEYYKLRREYYARRRDFLVGQLTAQADRLSDQARFILEKCEKKLVVENKQRKA 1054
Query: 336 MIAELIKRKYDSDPVKSWKMK 356
M EL+KR Y DPVK W+ +
Sbjct: 1055 MCDELLKRGYRPDPVKEWQRR 1075
>gi|256083186|ref|XP_002577830.1| DNA topoisomerase II [Schistosoma mansoni]
Length = 1599
Score = 283 bits (725), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 134/180 (74%), Positives = 154/180 (85%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYFS+M RHRI F+YSG DD I++AF K + +RK WLT + +E +R
Sbjct: 618 GLGTSTSKEAKEYFSDMNRHRIRFRYSGIEDDGSIQLAFDKSKIADRKNWLTNFTQERKR 677
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E+G+ E YLY K T+AITY +FV+KEL+LFSN+DNERSIPS+ DGLKPG RKVLFTCL
Sbjct: 678 RRELGLPEPYLYGKDTRAITYHDFVHKELVLFSNLDNERSIPSVVDGLKPGQRKVLFTCL 737
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN RE+KVAQLAGSVAE SAYHHGEQSLMSTII LAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 738 KRNLIREIKVAQLAGSVAELSAYHHGEQSLMSTIIGLAQNFVGSNNLNLLQPIGQFGTRL 797
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 82/145 (56%), Positives = 101/145 (69%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTD TV+FV+ MSP+KL +AE GLHK FKLQT ++ SM FD G L +
Sbjct: 959 DYKEYHTDVTVRFVIKMSPEKLREAESTGLHKFFKLQTVMSTGSMVCFDPLGCLKCYPNE 1018
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I++EFY +RL +Y KRK YLEGVL AEA KL NQARF++EK + IEN+ KKE+I
Sbjct: 1019 IIIIREFYELRLTWYEKRKVYLEGVLSAEARKLENQARFVLEKIQSIMVIENKPKKELIR 1078
Query: 339 ELIKRKYDSDPVKSWKMKQNKENAL 363
L + YDSDPVK+WK +K AL
Sbjct: 1079 MLKEANYDSDPVKAWKESIDKAAAL 1103
>gi|198473349|ref|XP_001356262.2| GA10169 [Drosophila pseudoobscura pseudoobscura]
gi|198139416|gb|EAL33325.2| GA10169 [Drosophila pseudoobscura pseudoobscura]
Length = 1450
Score = 283 bits (724), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 133/180 (73%), Positives = 153/180 (85%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF +MERHRILFKY G DD +I MAFS+K ++ RK WLT M+E +R
Sbjct: 594 GLGTSTSKEAKEYFQDMERHRILFKYDGQVDDDNIMMAFSRKHIESRKVWLTNHMDEVKR 653
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+EMG+ E YLYTK TK I+Y++F+N EL+LFSN DNERSIPSL DGLKPG RKV+FTC
Sbjct: 654 RREMGLPERYLYTKGTKHISYSDFINLELVLFSNADNERSIPSLVDGLKPGQRKVMFTCF 713
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQL+GSVAE SAYHHGE SL TI+NLAQN+VGSNNINLL+P GQFGT L
Sbjct: 714 KRNDKREVKVAQLSGSVAEMSAYHHGEVSLQMTIVNLAQNYVGSNNINLLEPRGQFGTRL 773
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 123/197 (62%), Gaps = 19/197 (9%)
Query: 171 FVGSNNINLLQ---------PIGQFGTFLFIFESTNLSGAVVNALDFGSGGWRFESNDYK 221
+V + NI +L PIG + + N V+ AL G+ + ++Y+
Sbjct: 886 YVHTGNIQILPGERVEITELPIGVW--------TQNYKENVLEALSNGTEKVKAIVSEYR 937
Query: 222 EYHTDTTVKFVVTMSPDKLHK--AEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTN 279
EYHTDTTV+FV++ +P + + +E G ++VFKL +TL+I+ M AFD+ L ++ ++
Sbjct: 938 EYHTDTTVRFVISFAPGEFRRIQSEDGGFYRVFKLSSTLSINQMHAFDQNNCLRRYASST 997
Query: 280 QILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAE 339
+LKEFY +R+EYY +RK+YL G L A A +L++QARFI+EKC+ L +EN+++K M E
Sbjct: 998 DVLKEFYQLRVEYYGRRKEYLVGQLTALADRLSDQARFILEKCEKTLVVENKQRKAMCDE 1057
Query: 340 LIKRKYDSDPVKSWKMK 356
L KR Y DPVK W+ +
Sbjct: 1058 LTKRGYRPDPVKEWQRR 1074
>gi|360044785|emb|CCD82333.1| putative dna topoisomerase II [Schistosoma mansoni]
Length = 1544
Score = 283 bits (724), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 134/180 (74%), Positives = 154/180 (85%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYFS+M RHRI F+YSG DD I++AF K + +RK WLT + +E +R
Sbjct: 618 GLGTSTSKEAKEYFSDMNRHRIRFRYSGIEDDGSIQLAFDKSKIADRKNWLTNFTQERKR 677
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E+G+ E YLY K T+AITY +FV+KEL+LFSN+DNERSIPS+ DGLKPG RKVLFTCL
Sbjct: 678 RRELGLPEPYLYGKDTRAITYHDFVHKELVLFSNLDNERSIPSVVDGLKPGQRKVLFTCL 737
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN RE+KVAQLAGSVAE SAYHHGEQSLMSTII LAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 738 KRNLIREIKVAQLAGSVAELSAYHHGEQSLMSTIIGLAQNFVGSNNLNLLQPIGQFGTRL 797
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 82/145 (56%), Positives = 101/145 (69%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTD TV+FV+ MSP+KL +AE GLHK FKLQT ++ SM FD G L +
Sbjct: 959 DYKEYHTDVTVRFVIKMSPEKLREAESTGLHKFFKLQTVMSTGSMVCFDPLGCLKCYPNE 1018
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I++EFY +RL +Y KRK YLEGVL AEA KL NQARF++EK + IEN+ KKE+I
Sbjct: 1019 IIIIREFYELRLTWYEKRKVYLEGVLSAEARKLENQARFVLEKIQSIMVIENKPKKELIR 1078
Query: 339 ELIKRKYDSDPVKSWKMKQNKENAL 363
L + YDSDPVK+WK +K AL
Sbjct: 1079 MLKEANYDSDPVKAWKESIDKAAAL 1103
>gi|194761210|ref|XP_001962822.1| GF15632 [Drosophila ananassae]
gi|190616519|gb|EDV32043.1| GF15632 [Drosophila ananassae]
Length = 1456
Score = 283 bits (724), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 134/180 (74%), Positives = 151/180 (83%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF +MERHRILFKY G DD I MAFS+K ++ RK WLT M+E +R
Sbjct: 599 GLGTSTSKEAKEYFQDMERHRILFKYDGSVDDESIVMAFSRKHIESRKVWLTNHMDEVKR 658
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RKE+G+ E YLYTK TK ITY +F+N EL+LFSN DNERSIPSL DGLKPG RKV+FTC
Sbjct: 659 RKELGLPERYLYTKGTKHITYADFINLELVLFSNADNERSIPSLVDGLKPGQRKVMFTCF 718
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQL+GSVAE SAYHHGE SL TI+NLAQN+VGSNNINLL+P GQFGT L
Sbjct: 719 KRNDKREVKVAQLSGSVAEMSAYHHGEVSLQMTIVNLAQNYVGSNNINLLEPRGQFGTRL 778
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 126/197 (63%), Gaps = 19/197 (9%)
Query: 171 FVGSNNINLLQ---------PIGQFGTFLFIFESTNLSGAVVNALDFGSGGWRFESNDYK 221
+V + NI +L P+G + + N V+ AL G+ + ++Y+
Sbjct: 891 YVHTGNIQILPGDRVEITELPVGVW--------TQNYKENVLEALANGTEKVKAVVSEYR 942
Query: 222 EYHTDTTVKFVVTMSPDKLHK--AEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTN 279
EYHTDTTV+FVV+ +P + ++ +E G ++VFKL ++L+ + M AFD+ L +F TT
Sbjct: 943 EYHTDTTVRFVVSFAPGEFNRIRSEDGGFYRVFKLTSSLSTNQMHAFDQNNCLRRFPTTM 1002
Query: 280 QILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAE 339
+LKEFY +RLEYYA+RKDYL G L A+A +L++QARFI+EKC+ L +EN+++K M E
Sbjct: 1003 DVLKEFYKLRLEYYARRKDYLVGQLTAQADRLSDQARFILEKCEKTLVVENKQRKAMCDE 1062
Query: 340 LIKRKYDSDPVKSWKMK 356
L+KR Y DPVK W+ +
Sbjct: 1063 LVKRGYRPDPVKEWQRR 1079
>gi|33636521|gb|AAQ23558.1| RE49802p [Drosophila melanogaster]
Length = 1157
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/180 (74%), Positives = 152/180 (84%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF +M+RHRILFKY G DD I MAFSKK ++ RK WLT M+E +R
Sbjct: 480 GLGTSTSKEAKEYFQDMDRHRILFKYDGSVDDESIVMAFSKKHIESRKVWLTNHMDEVKR 539
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RKE+G+ E YLYTK TK+ITY +F+N EL+LFSN DNERSIPSL DGLKPG RKV+FTC
Sbjct: 540 RKELGLPERYLYTKGTKSITYADFINLELVLFSNADNERSIPSLVDGLKPGQRKVMFTCF 599
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQL+GSVAE SAYHHGE SL TI+NLAQNFVG+NNINLL+P GQFGT L
Sbjct: 600 KRNDKREVKVAQLSGSVAEMSAYHHGEVSLQMTIVNLAQNFVGANNINLLEPRGQFGTRL 659
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 103/141 (73%), Gaps = 2/141 (1%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHK--AEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKF 275
++Y+EYHTDTTV+FV++ +P + + AE G ++VFKL TTL+ + M AFD+ L +F
Sbjct: 820 SEYREYHTDTTVRFVISFAPGEFERIHAEEGGFYRVFKLTTTLSTNQMHAFDQNNCLRRF 879
Query: 276 DTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKE 335
T ILKE+Y +R EYYA+R+D+L G L A+A +L++QARFI+EKC+ L +EN+++K
Sbjct: 880 PTAIDILKEYYKLRREYYARRRDFLVGQLTAQADRLSDQARFILEKCEKKLVVENKQRKA 939
Query: 336 MIAELIKRKYDSDPVKSWKMK 356
M EL+KR Y DPVK W+ +
Sbjct: 940 MCDELLKRGYRPDPVKEWQRR 960
>gi|348535612|ref|XP_003455293.1| PREDICTED: DNA topoisomerase 2-beta-like [Oreochromis niloticus]
Length = 1603
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 132/186 (70%), Positives = 155/186 (83%)
Query: 3 TIHDVMIAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLT 62
T H GLGTSTSKEAKEYF++ME+HRI F+Y+G DDA I +AFSKK D+RK WLT
Sbjct: 614 TWHIKYYKGLGTSTSKEAKEYFADMEKHRITFRYTGAEDDAAITLAFSKKKTDDRKEWLT 673
Query: 63 TWMEECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGS 122
+ME+ R+R+ G+ E YLY + ++Y +F+NKELILFSN DNERSIPSL DGLKPG
Sbjct: 674 NFMEDRRQRRMHGLPEQYLYGTHARHLSYNDFINKELILFSNSDNERSIPSLVDGLKPGQ 733
Query: 123 RKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQP 182
RKVLFTCLKRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNN+N+LQP
Sbjct: 734 RKVLFTCLKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNVNILQP 793
Query: 183 IGQFGT 188
+GQFGT
Sbjct: 794 LGQFGT 799
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 81/142 (57%), Positives = 105/142 (73%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
NDYKEYHTD TVKFVV MS +KL +AE GLHKVFKLQ++L +SM FD G L ++D+
Sbjct: 962 NDYKEYHTDATVKFVVRMSEEKLAQAEAAGLHKVFKLQSSLTCNSMVLFDHMGCLKRYDS 1021
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL Y RKD+L G LGAEA KL+NQARF++EK +G + IEN+ K+E+I
Sbjct: 1022 VQDILKEFFELRLHYCKLRKDWLLGSLGAEAAKLSNQARFVLEKIEGKIVIENKSKRELI 1081
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L+++ Y+SDPV +W Q K
Sbjct: 1082 RMLVQKGYESDPVAAWTKAQEK 1103
>gi|170592146|ref|XP_001900830.1| Probable DNA topoisomerase II [Brugia malayi]
gi|158591697|gb|EDP30301.1| Probable DNA topoisomerase II, putative [Brugia malayi]
Length = 1570
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 138/219 (63%), Positives = 169/219 (77%), Gaps = 11/219 (5%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M RHRI F+YSG+ DD+ + MAFSKK +++RK WLT WM E +
Sbjct: 665 GLGTSTSKEAKEYFTDMIRHRIRFQYSGEEDDSSLDMAFSKKKIEDRKVWLTNWMAEKKT 724
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E G+ E+YLY K T+A+++ +FVNKEL+LFSN DNERSIPSL DGLKPG RKVLFTC
Sbjct: 725 RREQGLTEEYLYDKDTRAVSFKDFVNKELVLFSNADNERSIPSLVDGLKPGQRKVLFTCF 784
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR D++EVKVAQLAG+V E SAYHHGE SLMSTI+NLAQ++VGSNNINLL PIGQFGT L
Sbjct: 785 KRADKKEVKVAQLAGAVGEMSAYHHGEASLMSTIVNLAQDYVGSNNINLLLPIGQFGTRL 844
Query: 191 ----------FIFESTN-LSGAVVNALDFGSGGWRFESN 218
+IF N ++ A+ A+D + FE N
Sbjct: 845 QGGKDSASPRYIFTQLNPVTRALFPAVDENVLRFLFEEN 883
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/165 (47%), Positives = 114/165 (69%)
Query: 195 STNLSGAVVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKL 254
+ N +V+ ++ GS D+KEYHTDTTVKFVV M+P KL +A+M+GLHK+FKL
Sbjct: 982 TQNYKESVLESMLEGSDKQPPLIQDFKEYHTDTTVKFVVKMNPAKLREAKMEGLHKIFKL 1041
Query: 255 QTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQ 314
QT + ISSM FD G L +F +I KEF+ +R + Y +RK + EG+L A++ +L+NQ
Sbjct: 1042 QTAINISSMVLFDPLGCLRRFSNVEEICKEFFEIRKKKYIERKAFQEGMLRAQSERLSNQ 1101
Query: 315 ARFIVEKCDGDLRIENRKKKEMIAELIKRKYDSDPVKSWKMKQNK 359
ARFI+EK G++ IEN++K ++ +L+K+ +D DPVK WK Q K
Sbjct: 1102 ARFILEKIKGEILIENKRKAVIVEQLVKKGFDPDPVKKWKELQRK 1146
>gi|195580167|ref|XP_002079927.1| Top2 [Drosophila simulans]
gi|194191936|gb|EDX05512.1| Top2 [Drosophila simulans]
Length = 1133
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/180 (74%), Positives = 152/180 (84%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF +M+RHRILFKY G DD I MAFSKK ++ RK WLT M+E +R
Sbjct: 595 GLGTSTSKEAKEYFQDMQRHRILFKYDGSVDDESIIMAFSKKHIESRKVWLTNHMDEVKR 654
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RKE+G+ E YLYTK TK+ITY +F+N EL+LFSN DNERSIPSL DGLKPG RKV+FTC
Sbjct: 655 RKELGLPERYLYTKGTKSITYADFINLELVLFSNADNERSIPSLVDGLKPGQRKVMFTCF 714
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQL+GSVAE SAYHHGE SL TI+NLAQNFVG+NNINLL+P GQFGT L
Sbjct: 715 KRNDKREVKVAQLSGSVAEMSAYHHGEVSLQMTIVNLAQNFVGANNINLLEPRGQFGTRL 774
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 112/164 (68%), Gaps = 2/164 (1%)
Query: 195 STNLSGAVVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLHK--AEMDGLHKVF 252
+ N V+ AL G+ + ++YKEYHTDTTV+FV++ +P + + AE G H+VF
Sbjct: 912 TQNYKENVLEALSNGTEKVKAVVSEYKEYHTDTTVRFVISFAPGEFERIRAEEGGFHRVF 971
Query: 253 KLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLT 312
KL TTL+ + M AFD+ L +F T ILKEFY +R EYYA+R+D+L G L A+A +L+
Sbjct: 972 KLTTTLSTNQMHAFDQNNCLRRFPTAIDILKEFYKLRREYYARRRDFLVGQLTAQADRLS 1031
Query: 313 NQARFIVEKCDGDLRIENRKKKEMIAELIKRKYDSDPVKSWKMK 356
+QARFI+EKC+ L +EN+++K M EL+KR Y DPVK W+ +
Sbjct: 1032 DQARFILEKCEKKLVVENKQRKAMCDELLKRGYRPDPVKEWQRR 1075
>gi|194879545|ref|XP_001974253.1| GG21630 [Drosophila erecta]
gi|190657440|gb|EDV54653.1| GG21630 [Drosophila erecta]
Length = 1446
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/180 (74%), Positives = 151/180 (83%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF +MERHRILFKY G DD I MAFSKK ++ RK WLT M+E +R
Sbjct: 595 GLGTSTSKEAKEYFQDMERHRILFKYDGSVDDESIVMAFSKKHIESRKVWLTNHMDEVKR 654
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RKE+G+ E YLYTK TK I+Y +F+N EL+LFSN DNERSIPSL DGLKPG RKV+FTC
Sbjct: 655 RKELGLPERYLYTKGTKHISYADFINLELVLFSNADNERSIPSLVDGLKPGQRKVMFTCF 714
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQL+GSVAE SAYHHGE SL TI+NLAQNFVG+NNINLL+P GQFGT L
Sbjct: 715 KRNDKREVKVAQLSGSVAEMSAYHHGEVSLQMTIVNLAQNFVGANNINLLEPRGQFGTRL 774
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/147 (52%), Positives = 105/147 (71%), Gaps = 2/147 (1%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHK--AEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKF 275
+DY+EYHTDTTV+FV++ +P + + AE G ++VFKL TTL+ + M AFD L +F
Sbjct: 935 SDYREYHTDTTVRFVISFAPGEFERIQAEDGGFYRVFKLTTTLSTNQMHAFDHNNCLRRF 994
Query: 276 DTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKE 335
T ILKEFY +R EYYA+RKD+L G L A+A +L++QARFIVEKCD L +EN+++K
Sbjct: 995 PTAIDILKEFYELRREYYARRKDFLVGQLTAQADRLSDQARFIVEKCDKKLVVENKQRKA 1054
Query: 336 MIAELIKRKYDSDPVKSWKMKQNKENA 362
M EL+KR Y DPVK W+ + E+A
Sbjct: 1055 MCDELLKRGYRPDPVKEWQRRIKMEDA 1081
>gi|402593234|gb|EJW87161.1| DNA topoisomerase 2, partial [Wuchereria bancrofti]
Length = 1042
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 140/219 (63%), Positives = 165/219 (75%), Gaps = 11/219 (5%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF +M RHRI FKYSG+ DD + MAFSKK ++ERK WLT WM E R
Sbjct: 296 GLGTSTSKEAKEYFMDMRRHRIQFKYSGEEDDQALDMAFSKKKIEERKIWLTNWMAERRN 355
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E G+ E+YLY K T +++ +FVNKEL+LFSN DNERSIPSL DGLKPG RKVLFTC
Sbjct: 356 RREDGLTEEYLYDKNTHVVSFKDFVNKELVLFSNCDNERSIPSLVDGLKPGQRKVLFTCF 415
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR D++EVKVAQLAG+V E SAYHHGE SLMSTI+NLAQ+FVGSNNINLL PIGQFGT L
Sbjct: 416 KRADKKEVKVAQLAGAVGEMSAYHHGEASLMSTIVNLAQDFVGSNNINLLLPIGQFGTRL 475
Query: 191 ----------FIFESTN-LSGAVVNALDFGSGGWRFESN 218
+IF N ++ A+ ++D + FE N
Sbjct: 476 QGGKDSASPRYIFTQLNPVTKALFPSIDENVLRFLFEEN 514
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 103/145 (71%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D+KEYHTDTTVKFV+ M+ DKL ++ +GLHKVFKLQ+ + +SM FD +G L +F+
Sbjct: 637 DFKEYHTDTTVKFVIKMNSDKLRASKEEGLHKVFKLQSVINTTSMVLFDPFGYLRRFENV 696
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I KEF+ +R + Y +RK + EG+L A++ +L+NQARFI+ K G++ IEN++K ++
Sbjct: 697 TDICKEFFEIRKKKYIERKSFQEGLLRAQSERLSNQARFILAKIKGEILIENKRKAAIVE 756
Query: 339 ELIKRKYDSDPVKSWKMKQNKENAL 363
+LIK + DPVK WK ++ K+ +
Sbjct: 757 QLIKMSFKPDPVKKWKEERKKQELI 781
>gi|195397652|ref|XP_002057442.1| GJ18099 [Drosophila virilis]
gi|194141096|gb|EDW57515.1| GJ18099 [Drosophila virilis]
Length = 1445
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 132/180 (73%), Positives = 154/180 (85%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF +M+RHRILFKY G DD +I MAF+KK V+ RKTWLT M+E +R
Sbjct: 596 GLGTSTSKEAKEYFQDMDRHRILFKYDGQVDDDNIVMAFAKKHVESRKTWLTNHMDEVKR 655
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+++G+ E YLYTK TK ++Y++F+N EL+LFSN DNERSIPSL DGLKPG RKV+FTC
Sbjct: 656 RRQLGLPERYLYTKGTKHVSYSDFINLELVLFSNADNERSIPSLVDGLKPGQRKVMFTCF 715
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQL+GSVAE SAYHHGE SL TI+NLAQNFVGSNNINLL+P GQFGT L
Sbjct: 716 KRNDKREVKVAQLSGSVAEMSAYHHGEMSLQMTIVNLAQNFVGSNNINLLEPRGQFGTRL 775
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 121/197 (61%), Gaps = 19/197 (9%)
Query: 171 FVGSNNINLLQ---------PIGQFGTFLFIFESTNLSGAVVNALDFGSGGWRFESNDYK 221
+V S NI LL P+G + + N V+ L G+ + ++Y+
Sbjct: 888 YVHSGNIQLLPDNRIEITELPVGVW--------TQNYKENVLEVLSNGTEKVKAVISEYR 939
Query: 222 EYHTDTTVKFVVTMSPDKLHK--AEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTN 279
EYHTDTTV+FVV+ +P + + +E G H+V KL ++L+ + M AFD L +F +
Sbjct: 940 EYHTDTTVRFVVSFAPGEFERLRSEPGGFHRVLKLSSSLSTNQMHAFDENNCLRRFPSPK 999
Query: 280 QILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAE 339
IL+EFY +RLEYY +RKDYL G L A++ +L++QARFI+EKC+ L IEN+++K MI E
Sbjct: 1000 DILQEFYKLRLEYYNRRKDYLVGQLTAQSDRLSDQARFILEKCEKKLTIENKQRKAMIEE 1059
Query: 340 LIKRKYDSDPVKSWKMK 356
LIKR Y DPVK W+ +
Sbjct: 1060 LIKRGYRPDPVKEWQRR 1076
>gi|357628633|gb|EHJ77901.1| DNA topoisomerase 2 [Danaus plexippus]
Length = 1545
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/192 (70%), Positives = 155/192 (80%), Gaps = 12/192 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF NM+RHRI F+YSG DD HI +AFSKK D+RK WLT M+E +R
Sbjct: 616 GLGTSTSKEAKEYFQNMDRHRIRFRYSGPTDDHHIELAFSKKGADQRKEWLTNHMDEVKR 675
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RKE+G+ E YLYTK TKA+TY++FVN EL+LFSN DN RSIPS+ DGLKPG RKV+FTC+
Sbjct: 676 RKEIGLPERYLYTKETKAVTYSDFVNLELVLFSNGDNVRSIPSMMDGLKPGQRKVIFTCI 735
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQ------------SLMSTIINLAQNFVGSNNIN 178
KRND+REVKVAQLAGSVAEHSAYHHG + SL TI+NLAQN+VGSNNIN
Sbjct: 736 KRNDKREVKVAQLAGSVAEHSAYHHGRRMGPEFIARHFHHSLAMTIVNLAQNYVGSNNIN 795
Query: 179 LLQPIGQFGTFL 190
LL+P GQFGT L
Sbjct: 796 LLEPRGQFGTRL 807
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 80/146 (54%), Positives = 110/146 (75%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
++Y+EY+TDTTV+FVVT+ P KL + E +G+HKVFKLQTT++++ M AFD L K+D
Sbjct: 966 SEYREYNTDTTVRFVVTLLPGKLAEVEAEGIHKVFKLQTTISMTCMNAFDHNNCLKKYDK 1025
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
++L EFY +RL YYA+RK++LEG L AEA KL+NQARFI+EKCD L +EN+K+K ++
Sbjct: 1026 VEEVLHEFYGIRLRYYARRKEWLEGQLQAEADKLSNQARFILEKCDKGLVVENKKRKVLV 1085
Query: 338 AELIKRKYDSDPVKSWKMKQNKENAL 363
ELIKR Y DP+ WK + +K L
Sbjct: 1086 EELIKRGYAPDPIADWKKRASKMQGL 1111
>gi|195484462|ref|XP_002090705.1| GE12650 [Drosophila yakuba]
gi|194176806|gb|EDW90417.1| GE12650 [Drosophila yakuba]
Length = 1441
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/180 (74%), Positives = 150/180 (83%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF +MERHRILFKY G DD I MAFSKK ++ RK WLT M+E +R
Sbjct: 595 GLGTSTSKEAKEYFQDMERHRILFKYDGSVDDESIVMAFSKKHIESRKVWLTNHMDEVKR 654
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RKE+G+ E YLY K TK ITY +F+N EL+LFSN DNERSIPSL DGLKPG RKV+FTC
Sbjct: 655 RKELGLPERYLYAKGTKHITYADFINLELVLFSNADNERSIPSLVDGLKPGQRKVMFTCF 714
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQL+GSVAE SAYHHGE SL TI+NLAQNFVG+NNINLL+P GQFGT L
Sbjct: 715 KRNDKREVKVAQLSGSVAEMSAYHHGEVSLQMTIVNLAQNFVGANNINLLEPRGQFGTRL 774
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 124/203 (61%), Gaps = 19/203 (9%)
Query: 171 FVGSNNINLLQ---------PIGQFGTFLFIFESTNLSGAVVNALDFGSGGWRFESNDYK 221
+V + NI +L P+G + + N V+ L G+ + +DY+
Sbjct: 887 YVQTGNIQILPGNRVEITELPVGVW--------TQNYKENVLEPLANGTEKVKAIVSDYR 938
Query: 222 EYHTDTTVKFVVTMSPDKLHK--AEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTN 279
EYHTDTTV+FV+T + + + AE G H+VFKL TTL+ + M AFD+ L +F T
Sbjct: 939 EYHTDTTVRFVITFATGEFERIQAEEGGFHRVFKLTTTLSTNQMHAFDQNNCLRRFPTAV 998
Query: 280 QILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAE 339
ILKEFY +R EYYA+RKD+L G L A+A +L++QARFI+EKC+ L +EN+++K M E
Sbjct: 999 DILKEFYQLRREYYARRKDFLVGQLTAQADRLSDQARFILEKCEKKLVVENKQRKAMCDE 1058
Query: 340 LIKRKYDSDPVKSWKMKQNKENA 362
L+KR Y DPVK W+ + E+A
Sbjct: 1059 LLKRGYRPDPVKEWQRRIKMEDA 1081
>gi|195164670|ref|XP_002023169.1| GL21103 [Drosophila persimilis]
gi|194105254|gb|EDW27297.1| GL21103 [Drosophila persimilis]
Length = 1451
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 132/180 (73%), Positives = 153/180 (85%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF +MERHRILFKY G DD +I MAFS+K ++ RK WLT M+E +R
Sbjct: 594 GLGTSTSKEAKEYFQDMERHRILFKYDGQVDDDNIMMAFSRKHIESRKVWLTNHMDEVKR 653
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E+G+ E YLYTK TK I+Y++F+N EL+LFSN DNERSIPSL DGLKPG RKV+FTC
Sbjct: 654 RRELGLPERYLYTKGTKHISYSDFINLELVLFSNADNERSIPSLVDGLKPGQRKVMFTCF 713
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQL+GSVAE SAYHHGE SL TI+NLAQN+VGSNNINLL+P GQFGT L
Sbjct: 714 KRNDKREVKVAQLSGSVAEMSAYHHGEVSLQMTIVNLAQNYVGSNNINLLEPRGQFGTRL 773
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 123/197 (62%), Gaps = 19/197 (9%)
Query: 171 FVGSNNINLLQ---------PIGQFGTFLFIFESTNLSGAVVNALDFGSGGWRFESNDYK 221
+V + NI +L PIG + + N V+ AL G+ + ++Y+
Sbjct: 886 YVHTGNIQILPGERVEITELPIGVW--------TQNYKENVLEALSNGTEKVKAIVSEYR 937
Query: 222 EYHTDTTVKFVVTMSPDKLHK--AEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTN 279
EYHTDTTV+FV++ +P + + +E G ++VFKL +TL+I+ M AFD+ L ++ ++
Sbjct: 938 EYHTDTTVRFVISFAPGEFRRIQSEDGGFYRVFKLSSTLSINQMHAFDQNNCLRRYASST 997
Query: 280 QILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAE 339
+LKEFY +R+EYY +RK+YL G L A A +L++QARFI+EKC+ L +EN+++K M E
Sbjct: 998 DVLKEFYQLRVEYYGRRKEYLVGQLTALADRLSDQARFILEKCEKTLVVENKQRKAMCDE 1057
Query: 340 LIKRKYDSDPVKSWKMK 356
L KR Y DPVK W+ +
Sbjct: 1058 LTKRGYRPDPVKEWQRR 1074
>gi|393908751|gb|EJD75192.1| DNA topoisomerase 2 [Loa loa]
Length = 1569
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 129/180 (71%), Positives = 153/180 (85%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M RHRI F+YSG+ DD + MAFSKK +++RK WLT WM E +
Sbjct: 664 GLGTSTSKEAKEYFTDMVRHRIRFQYSGEEDDNSLDMAFSKKKIEDRKVWLTNWMAEKKA 723
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E G+ E+YLY K T+A+++ +FVNKEL+LFSN DNERSIPSL DGLKPG RKVLFTC
Sbjct: 724 RREQGLTEEYLYNKDTRAVSFKDFVNKELVLFSNADNERSIPSLVDGLKPGQRKVLFTCF 783
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR D++EVKVAQLAG+V E SAYHHGE SLMSTI+NLAQ++VGSNNINLL PIGQFGT L
Sbjct: 784 KRADKKEVKVAQLAGAVGEMSAYHHGEASLMSTIVNLAQDYVGSNNINLLLPIGQFGTRL 843
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 104/141 (73%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D+KEYHTDTTVKFVV M+ KL +AEM+GLHK+FKLQ+ + ISSM FD G L +F
Sbjct: 1005 DFKEYHTDTTVKFVVKMNAAKLREAEMEGLHKIFKLQSAINISSMVLFDPLGCLRRFPNV 1064
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I KEF+ +R + Y +RK + EG+L A++ +L+NQARFI+EK G++ IEN++K ++
Sbjct: 1065 EEICKEFFEIRKKKYIERKAFQEGMLRAQSERLSNQARFILEKIKGEILIENKRKVAIVE 1124
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
+L+K+ +D DPVK WK Q K
Sbjct: 1125 QLVKKGFDPDPVKRWKELQRK 1145
>gi|312069494|ref|XP_003137708.1| TOPoisomerase family member [Loa loa]
Length = 1485
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 129/180 (71%), Positives = 153/180 (85%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M RHRI F+YSG+ DD + MAFSKK +++RK WLT WM E +
Sbjct: 664 GLGTSTSKEAKEYFTDMVRHRIRFQYSGEEDDNSLDMAFSKKKIEDRKVWLTNWMAEKKA 723
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E G+ E+YLY K T+A+++ +FVNKEL+LFSN DNERSIPSL DGLKPG RKVLFTC
Sbjct: 724 RREQGLTEEYLYNKDTRAVSFKDFVNKELVLFSNADNERSIPSLVDGLKPGQRKVLFTCF 783
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR D++EVKVAQLAG+V E SAYHHGE SLMSTI+NLAQ++VGSNNINLL PIGQFGT L
Sbjct: 784 KRADKKEVKVAQLAGAVGEMSAYHHGEASLMSTIVNLAQDYVGSNNINLLLPIGQFGTRL 843
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 104/141 (73%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D+KEYHTDTTVKFVV M+ KL +AEM+GLHK+FKLQ+ + ISSM FD G L +F
Sbjct: 1005 DFKEYHTDTTVKFVVKMNAAKLREAEMEGLHKIFKLQSAINISSMVLFDPLGCLRRFPNV 1064
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I KEF+ +R + Y +RK + EG+L A++ +L+NQARFI+EK G++ IEN++K ++
Sbjct: 1065 EEICKEFFEIRKKKYIERKAFQEGMLRAQSERLSNQARFILEKIKGEILIENKRKVAIVE 1124
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
+L+K+ +D DPVK WK Q K
Sbjct: 1125 QLVKKGFDPDPVKRWKELQRK 1145
>gi|339241631|ref|XP_003376741.1| DNA topoisomerase 2-alpha [Trichinella spiralis]
gi|316974528|gb|EFV58014.1| DNA topoisomerase 2-alpha [Trichinella spiralis]
Length = 1357
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 132/181 (72%), Positives = 151/181 (83%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF+NM+RHRI+FKY G DD I +AFSKK V++RK WL WM ++
Sbjct: 636 GLGTSTAKEAKEYFTNMDRHRIVFKYEGPTDDDAIELAFSKKRVEDRKNWLGDWMLHKKQ 695
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+E + E+YLY + TK I+Y F++KELILFSNMDNERSIPS+ DGLKPG RKVLFTC
Sbjct: 696 IQEANLPEEYLYQEDTKEISYKSFIDKELILFSNMDNERSIPSMVDGLKPGQRKVLFTCF 755
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAEHSAYHHGE SLMSTIINLA NFVGSNNIN+L PIGQFGT L
Sbjct: 756 KRNDKREVKVAQLAGSVAEHSAYHHGEVSLMSTIINLAHNFVGSNNINILLPIGQFGTRL 815
Query: 191 F 191
Sbjct: 816 L 816
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 116/177 (65%), Gaps = 8/177 (4%)
Query: 182 PIGQFGTFLFIFESTNLSGAVVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLH 241
PIG + + N +V+ + +G+ G + D+KEYHTDTTV+F++ MS +K+
Sbjct: 948 PIGTW--------TQNYKESVLEPMLYGADGKQPVIQDFKEYHTDTTVRFIIRMSKEKMA 999
Query: 242 KAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLE 301
+A G+HK FKLQT + SSM FD +G L KF+T IL FY VRL+ Y KRK YLE
Sbjct: 1000 EANAHGIHKYFKLQTIINSSSMVLFDEHGCLKKFETAKDILISFYKVRLDMYVKRKAYLE 1059
Query: 302 GVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKYDSDPVKSWKMKQN 358
G L A+A +L QARFI+EK +G ++IEN KKK ++ +L++R Y +DPVK WK +N
Sbjct: 1060 GHLEAQANRLKAQARFIMEKIEGVIKIENMKKKHIVEQLVERGYPADPVKKWKEAEN 1116
>gi|324500590|gb|ADY40273.1| DNA topoisomerase 2 [Ascaris suum]
Length = 1560
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 128/180 (71%), Positives = 153/180 (85%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M RHRI F+Y G +DD + MAFSKK +++RKTWLT+WM E +
Sbjct: 613 GLGTSTSKEAKEYFTDMARHRIRFRYGGQDDDMSLDMAFSKKRIEDRKTWLTSWMAERKN 672
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E G+ E+YLY K T +++ +FVNKEL+LFSN+DNERSIPSL DGLKPG RKVLFTC
Sbjct: 673 RREQGLTEEYLYDKDTHTVSFKDFVNKELVLFSNLDNERSIPSLVDGLKPGQRKVLFTCF 732
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR D++EVKVAQLAG+V E SAYHHGE SLM+TIINLAQ++VGSNNINLL PIGQFGT L
Sbjct: 733 KRADKKEVKVAQLAGAVGEMSAYHHGEASLMATIINLAQDYVGSNNINLLLPIGQFGTRL 792
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 102/142 (71%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D+KEYHTDTTVKF+V M+P+KL A+M+GLHKVFKLQT + +SM FD G L +F+T
Sbjct: 954 DFKEYHTDTTVKFLVKMTPEKLRAAQMEGLHKVFKLQTVINTTSMVLFDAMGCLRRFNTV 1013
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I +F+ R + Y +RK + G+L A++ +L+NQARFI+ K G++ IEN++K ++
Sbjct: 1014 EEICTDFFETRKKKYIERKAFQMGMLRAQSQRLSNQARFILAKIKGEILIENKRKLVIVE 1073
Query: 339 ELIKRKYDSDPVKSWKMKQNKE 360
+L+K +D DPVK WK Q ++
Sbjct: 1074 QLVKMGFDPDPVKKWKEAQKRK 1095
>gi|393908752|gb|EJD75193.1| DNA topoisomerase 2, variant [Loa loa]
Length = 1352
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 129/180 (71%), Positives = 153/180 (85%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M RHRI F+YSG+ DD + MAFSKK +++RK WLT WM E +
Sbjct: 664 GLGTSTSKEAKEYFTDMVRHRIRFQYSGEEDDNSLDMAFSKKKIEDRKVWLTNWMAEKKA 723
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E G+ E+YLY K T+A+++ +FVNKEL+LFSN DNERSIPSL DGLKPG RKVLFTC
Sbjct: 724 RREQGLTEEYLYNKDTRAVSFKDFVNKELVLFSNADNERSIPSLVDGLKPGQRKVLFTCF 783
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR D++EVKVAQLAG+V E SAYHHGE SLMSTI+NLAQ++VGSNNINLL PIGQFGT L
Sbjct: 784 KRADKKEVKVAQLAGAVGEMSAYHHGEASLMSTIVNLAQDYVGSNNINLLLPIGQFGTRL 843
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 104/141 (73%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D+KEYHTDTTVKFVV M+ KL +AEM+GLHK+FKLQ+ + ISSM FD G L +F
Sbjct: 1005 DFKEYHTDTTVKFVVKMNAAKLREAEMEGLHKIFKLQSAINISSMVLFDPLGCLRRFPNV 1064
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I KEF+ +R + Y +RK + EG+L A++ +L+NQARFI+EK G++ IEN++K ++
Sbjct: 1065 EEICKEFFEIRKKKYIERKAFQEGMLRAQSERLSNQARFILEKIKGEILIENKRKVAIVE 1124
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
+L+K+ +D DPVK WK Q K
Sbjct: 1125 QLVKKGFDPDPVKRWKELQRK 1145
>gi|324500583|gb|ADY40270.1| DNA topoisomerase 2 [Ascaris suum]
Length = 1514
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 128/180 (71%), Positives = 153/180 (85%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M RHRI F+Y G +DD + MAFSKK +++RKTWLT+WM E +
Sbjct: 613 GLGTSTSKEAKEYFTDMARHRIRFRYGGQDDDMSLDMAFSKKRIEDRKTWLTSWMAERKN 672
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E G+ E+YLY K T +++ +FVNKEL+LFSN+DNERSIPSL DGLKPG RKVLFTC
Sbjct: 673 RREQGLTEEYLYDKDTHTVSFKDFVNKELVLFSNLDNERSIPSLVDGLKPGQRKVLFTCF 732
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR D++EVKVAQLAG+V E SAYHHGE SLM+TIINLAQ++VGSNNINLL PIGQFGT L
Sbjct: 733 KRADKKEVKVAQLAGAVGEMSAYHHGEASLMATIINLAQDYVGSNNINLLLPIGQFGTRL 792
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 102/142 (71%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D+KEYHTDTTVKF+V M+P+KL A+M+GLHKVFKLQT + +SM FD G L +F+T
Sbjct: 954 DFKEYHTDTTVKFLVKMTPEKLRAAQMEGLHKVFKLQTVINTTSMVLFDAMGCLRRFNTV 1013
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I +F+ R + Y +RK + G+L A++ +L+NQARFI+ K G++ IEN++K ++
Sbjct: 1014 EEICTDFFETRKKKYIERKAFQMGMLRAQSQRLSNQARFILAKIKGEILIENKRKLVIVE 1073
Query: 339 ELIKRKYDSDPVKSWKMKQNKE 360
+L+K +D DPVK WK Q ++
Sbjct: 1074 QLVKMGFDPDPVKKWKEAQKRK 1095
>gi|158299572|ref|XP_319665.4| AGAP008917-PA [Anopheles gambiae str. PEST]
gi|157013582|gb|EAA14841.5| AGAP008917-PA [Anopheles gambiae str. PEST]
Length = 1427
Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 134/180 (74%), Positives = 149/180 (82%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF NMERHRILF+Y DD I +AFSKK +++RK WLT MEECR
Sbjct: 594 GLGTSTSKEAKEYFQNMERHRILFRYEDTGDDDAIMLAFSKKAIEQRKDWLTAHMEECRH 653
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ E YLYTKTTK I+Y +FVN EL+LFSN DN RSIP + DGLKPG RKVL+TC
Sbjct: 654 RKSVGLQERYLYTKTTKEISYKDFVNLELVLFSNSDNVRSIPCMLDGLKPGQRKVLYTCF 713
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR+D+REVKVAQLAGSVAE SAYHHGE SL STIINLAQN+VGSNNINLL P GQFGT L
Sbjct: 714 KRDDKREVKVAQLAGSVAEKSAYHHGEMSLCSTIINLAQNYVGSNNINLLYPGGQFGTRL 773
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 108/157 (68%), Gaps = 2/157 (1%)
Query: 202 VVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLHK--AEMDGLHKVFKLQTTLA 259
V+ L GS + DYKEY+TDTTV+FV++ P + K AE G H++FKL ++++
Sbjct: 918 VLEPLLHGSDKAKAVIADYKEYNTDTTVRFVISFLPGEYEKLYAEEGGFHRLFKLTSSIS 977
Query: 260 ISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIV 319
+SM AFD L ++ N+I EFY VRL++Y KR+ YL G+L AEA L+++ARFI+
Sbjct: 978 TASMNAFDDKNYLKRYAHANEIFMEFYTVRLDFYGKRRAYLLGMLQAEADSLSDKARFIM 1037
Query: 320 EKCDGDLRIENRKKKEMIAELIKRKYDSDPVKSWKMK 356
EKC+G L +EN+K+K +I ELIKR Y +DP++ WK +
Sbjct: 1038 EKCNGTLVVENKKRKALIDELIKRGYRADPIQEWKRR 1074
>gi|170575369|ref|XP_001893211.1| DNA topoisomerase II, alpha isozyme [Brugia malayi]
gi|158600906|gb|EDP37957.1| DNA topoisomerase II, alpha isozyme, putative [Brugia malayi]
Length = 1511
Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 140/219 (63%), Positives = 164/219 (74%), Gaps = 11/219 (5%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF +M RHRI FKYSG+ DD + MAFSKK V+ERK WLT WM E R
Sbjct: 640 GLGTSTSKEAKEYFMDMRRHRIQFKYSGEEDDQALDMAFSKKKVEERKIWLTNWMAERRN 699
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E G+ E+YLY K T +++ +FVNKEL+LF N DNERSIPSL DGLKPG RKVLFTC
Sbjct: 700 RREDGLTEEYLYDKNTYVVSFKDFVNKELVLFLNCDNERSIPSLVDGLKPGQRKVLFTCF 759
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR D++EVKVAQLAG+V E SAYHHGE SLMSTI+NLAQ+FVGSNNINLL PIGQFGT L
Sbjct: 760 KRADKKEVKVAQLAGAVGEMSAYHHGEASLMSTIVNLAQDFVGSNNINLLLPIGQFGTRL 819
Query: 191 ----------FIFESTN-LSGAVVNALDFGSGGWRFESN 218
+IF N ++ A+ ++D + FE N
Sbjct: 820 QGGKDSASPRYIFTQLNPVTKALFPSIDENVLRFLFEEN 858
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 104/155 (67%), Gaps = 10/155 (6%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSM--------CA--FDR 268
D+KEYHTDTTVKFV+ M+ DKL ++ +GLHKVFKLQT + +SM C FD
Sbjct: 981 DFKEYHTDTTVKFVIKMNGDKLRASKEEGLHKVFKLQTVINTTSMVYEHYSRVCQVLFDP 1040
Query: 269 YGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRI 328
+G L +F+ I KEF+ +R + Y +RK + EG+L A++ +L+NQARFI+ K G++ I
Sbjct: 1041 FGYLRRFENVTDICKEFFEIRKKKYIERKSFQEGLLRAQSERLSNQARFILAKIKGEILI 1100
Query: 329 ENRKKKEMIAELIKRKYDSDPVKSWKMKQNKENAL 363
EN++K ++ +LIK + DPVK WK ++ K+ +
Sbjct: 1101 ENKRKAAIVEQLIKMSFKPDPVKKWKEERKKQELI 1135
>gi|432921791|ref|XP_004080225.1| PREDICTED: DNA topoisomerase 2-alpha-like [Oryzias latipes]
Length = 1571
Score = 280 bits (717), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 131/180 (72%), Positives = 151/180 (83%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS+EAKEYFS+MERHRI FKYSG DD I +AFSKK V+ERK WLT +M R+
Sbjct: 611 GLGTSTSQEAKEYFSDMERHRIPFKYSGPEDDEAISLAFSKKKVEERKEWLTNFMVNRRQ 670
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E + EDYLY ++TK+++Y +F+NKEL+LFSN DNERSIP L DG KPG RKVLF C
Sbjct: 671 RREHNLPEDYLYGQSTKSLSYNDFINKELVLFSNSDNERSIPCLVDGFKPGQRKVLFCCF 730
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGE SLM TI+ LAQNFVGSNN+NLLQP+GQFGT L
Sbjct: 731 KRNDKREVKVAQLAGSVAEMSAYHHGEVSLMMTIVGLAQNFVGSNNLNLLQPLGQFGTRL 790
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/141 (56%), Positives = 105/141 (74%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTD TV+FVV M+ +KL +AE GLHKVFKLQ+ L +SM FD G L K+++
Sbjct: 952 DYKEYHTDATVRFVVKMTEEKLMEAEAAGLHKVFKLQSPLTCNSMVLFDYAGSLKKYESV 1011
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILK+F+ +R++YY RK++L G+LGAE+ KL+NQARFI+EK G L IEN+ KKE+I
Sbjct: 1012 QDILKDFFDLRMKYYVLRKEWLVGMLGAESSKLSNQARFILEKIQGTLVIENKPKKELIR 1071
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
L + YDSDPV++WK Q K
Sbjct: 1072 MLQEMGYDSDPVRAWKEAQKK 1092
>gi|312076268|ref|XP_003140785.1| hypothetical protein LOAG_05201 [Loa loa]
gi|307764049|gb|EFO23283.1| hypothetical protein LOAG_05201 [Loa loa]
Length = 729
Score = 280 bits (715), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 131/180 (72%), Positives = 150/180 (83%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF +M RHRI F+YSG+ DD + MAFSKK ++ERK WLT WM E R
Sbjct: 114 GLGTSTSKEAKEYFMDMRRHRIQFRYSGEEDDQALDMAFSKKKIEERKIWLTNWMAERRS 173
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E G+ E+YLY K T +++ +FVNKEL+LFSN DNERSIPSL DGLKPG RKVLFTC
Sbjct: 174 RREDGLTEEYLYDKDTHVVSFKDFVNKELVLFSNCDNERSIPSLVDGLKPGQRKVLFTCF 233
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR D++EVKVAQLAG+V E SAYHHGE SLMSTI+NLAQ+FVGSNNINLL PIGQFGT L
Sbjct: 234 KRADKKEVKVAQLAGAVGEMSAYHHGEASLMSTIVNLAQDFVGSNNINLLLPIGQFGTRL 293
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 103/145 (71%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D+KEYHTDTTVKFVV MS DKL ++ +GLHKVFKLQ+ + +SM FD +G L +F+
Sbjct: 460 DFKEYHTDTTVKFVVKMSSDKLRASKEEGLHKVFKLQSVINTTSMVLFDPFGYLRRFENV 519
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I KEF+ +R + Y +RK + EG+L A++ +L+NQARFI+ K G++ IEN++K ++
Sbjct: 520 TDICKEFFEIRKKKYIERKSFQEGLLRAQSERLSNQARFILAKIKGEILIENKRKATIVE 579
Query: 339 ELIKRKYDSDPVKSWKMKQNKENAL 363
+LIK + DPVK WK ++ K+ +
Sbjct: 580 QLIKMSFKPDPVKKWKEERKKQELM 604
>gi|268531746|ref|XP_002631000.1| Hypothetical protein CBG02746 [Caenorhabditis briggsae]
Length = 1506
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 129/180 (71%), Positives = 150/180 (83%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYFS+M RHRI FKY+G +DD + MAFSKK +DERK WLT WM+E +
Sbjct: 648 GLGTSTSKEAKEYFSDMVRHRIRFKYTGADDDNAVDMAFSKKKIDERKHWLTKWMQEKKA 707
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK+ G+ E+YLY K T+ +T+ +FVN+EL+LFSN DNERSIP L DG KPG RKVLF C
Sbjct: 708 RKQQGLAEEYLYNKDTRTVTFKDFVNQELVLFSNCDNERSIPCLVDGFKPGQRKVLFACF 767
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR D+REVKVAQLAG+VAE SAYHHGE SLM TIINLAQ++VGSNNIN+L PIGQFGT L
Sbjct: 768 KRADKREVKVAQLAGAVAELSAYHHGEVSLMGTIINLAQDYVGSNNINVLLPIGQFGTRL 827
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 98/141 (69%), Gaps = 1/141 (0%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDG-LHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
+DYKEYHTDTTVKFVV +SP KL + E G LH VFKLQ + + M FD G L +
Sbjct: 988 SDYKEYHTDTTVKFVVKLSPGKLAELERSGDLHTVFKLQQVINTTCMVLFDAAGCLRTYT 1047
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
T +I +EF+ VR E Y +RK+Y+ GVL A++ +LTNQARFI+ K + ++ +EN+KK +
Sbjct: 1048 TPEEITQEFFDVRKEKYIQRKEYMVGVLQAQSKRLTNQARFILAKINNEIIMENKKKASI 1107
Query: 337 IAELIKRKYDSDPVKSWKMKQ 357
+ LIK K+D DPVK WK +Q
Sbjct: 1108 VETLIKMKFDPDPVKKWKEEQ 1128
>gi|410896057|ref|XP_003961516.1| PREDICTED: DNA topoisomerase 2-alpha-like [Takifugu rubripes]
Length = 1562
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 130/180 (72%), Positives = 150/180 (83%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS+EAKEYFS+M+RHRI FKY+G DD I +AFSKK V+ERK WLT +M R+
Sbjct: 611 GLGTSTSQEAKEYFSDMQRHRIPFKYAGPEDDEAITLAFSKKKVEERKEWLTNFMTNRRQ 670
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E + EDYLY +TTK ++Y +FVNKEL+LFSN DNERSIP L DG KPG RKVLF C
Sbjct: 671 RREHNLPEDYLYGQTTKYLSYNDFVNKELVLFSNSDNERSIPCLVDGFKPGQRKVLFCCF 730
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGE SLM TI+ LAQNFVGSNN+N+LQP+GQFGT L
Sbjct: 731 KRNDKREVKVAQLAGSVAEMSAYHHGEVSLMMTIVGLAQNFVGSNNLNMLQPLGQFGTRL 790
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 82/139 (58%), Positives = 104/139 (74%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D+KEYHTDTTV+FVV MS +KL +AE G HKVFKLQ L +SM FD G L K+++
Sbjct: 952 DFKEYHTDTTVRFVVKMSEEKLREAEAAGFHKVFKLQNPLTCNSMVLFDHAGSLKKYESV 1011
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILK+F+ +R++YY RKD+L G+LGAE+ KLTNQARFI+EK G L IEN+ KKE+I
Sbjct: 1012 QDILKDFFELRMKYYVLRKDWLVGMLGAESAKLTNQARFILEKIQGTLVIENKPKKELIR 1071
Query: 339 ELIKRKYDSDPVKSWKMKQ 357
L + YDSDPVK+WK+ Q
Sbjct: 1072 MLQQMGYDSDPVKAWKLAQ 1090
>gi|270004896|gb|EFA01344.1| topoisomerase II [Tribolium castaneum]
Length = 1547
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 131/178 (73%), Positives = 148/178 (83%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS SKEAKEYFS+M RHRI F+Y G DD HI +AFSKK ++ RK WLT +M E RR
Sbjct: 619 GLGTSDSKEAKEYFSDMARHRIRFRYKGPEDDDHIVLAFSKKHIEHRKEWLTNFMVESRR 678
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RKE+G+ E YLY K TK+++YT+FVN EL+LFSN DN RSIP L DGLKPG RKV+FTC
Sbjct: 679 RKELGLAEKYLYAKDTKSVSYTDFVNLELVLFSNADNIRSIPCLVDGLKPGQRKVMFTCF 738
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRND+REVKVAQLAGSVAE SAYHHGE SL TI+NLAQNFVGSNNINLL+P GQFGT
Sbjct: 739 KRNDKREVKVAQLAGSVAEMSAYHHGEVSLCMTIVNLAQNFVGSNNINLLEPRGQFGT 796
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 125/194 (64%), Gaps = 10/194 (5%)
Query: 171 FVGSNNINLLQ-PIGQFGTFLFIFESTNLSGAVVNALDFGSGGWRFESNDYKEYHTDTTV 229
+G N + + + PIG + + N V+ L GS + DYKEY+TDTTV
Sbjct: 919 IIGDNRVEITELPIGTW--------TQNYKENVLEPLLHGSEKVKAVIQDYKEYNTDTTV 970
Query: 230 KFVVTMSPDKLHKAEMD-GLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAV 288
KF++T P +L E + GLHK FKLQ+ ++ SSMC FD G + ++D+ ILK++Y +
Sbjct: 971 KFIITFLPGQLETLENEAGLHKTFKLQSLISTSSMCVFDELGCIRRYDSVTDILKDYYKL 1030
Query: 289 RLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKYDSD 348
RL Y KRKDYLEG+L AEA KL+NQARFI+EKCD L +EN+K+K +I ELIKR Y+ D
Sbjct: 1031 RLTMYQKRKDYLEGMLKAEASKLSNQARFIMEKCDRTLVVENKKRKVIIDELIKRGYEPD 1090
Query: 349 PVKSWKMKQNKENA 362
PVK WK + E+
Sbjct: 1091 PVKDWKQRVATEDG 1104
>gi|91079588|ref|XP_967653.1| PREDICTED: similar to topoisomerase II [Tribolium castaneum]
Length = 1552
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 131/178 (73%), Positives = 148/178 (83%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS SKEAKEYFS+M RHRI F+Y G DD HI +AFSKK ++ RK WLT +M E RR
Sbjct: 619 GLGTSDSKEAKEYFSDMARHRIRFRYKGPEDDDHIVLAFSKKHIEHRKEWLTNFMVESRR 678
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RKE+G+ E YLY K TK+++YT+FVN EL+LFSN DN RSIP L DGLKPG RKV+FTC
Sbjct: 679 RKELGLAEKYLYAKDTKSVSYTDFVNLELVLFSNADNIRSIPCLVDGLKPGQRKVMFTCF 738
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRND+REVKVAQLAGSVAE SAYHHGE SL TI+NLAQNFVGSNNINLL+P GQFGT
Sbjct: 739 KRNDKREVKVAQLAGSVAEMSAYHHGEVSLCMTIVNLAQNFVGSNNINLLEPRGQFGT 796
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 125/194 (64%), Gaps = 10/194 (5%)
Query: 171 FVGSNNINLLQ-PIGQFGTFLFIFESTNLSGAVVNALDFGSGGWRFESNDYKEYHTDTTV 229
+G N + + + PIG + + N V+ L GS + DYKEY+TDTTV
Sbjct: 919 IIGDNRVEITELPIGTW--------TQNYKENVLEPLLHGSEKVKAVIQDYKEYNTDTTV 970
Query: 230 KFVVTMSPDKLHKAEMD-GLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAV 288
KF++T P +L E + GLHK FKLQ+ ++ SSMC FD G + ++D+ ILK++Y +
Sbjct: 971 KFIITFLPGQLETLENEAGLHKTFKLQSLISTSSMCVFDELGCIRRYDSVTDILKDYYKL 1030
Query: 289 RLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKYDSD 348
RL Y KRKDYLEG+L AEA KL+NQARFI+EKCD L +EN+K+K +I ELIKR Y+ D
Sbjct: 1031 RLTMYQKRKDYLEGMLKAEASKLSNQARFIMEKCDRTLVVENKKRKVIIDELIKRGYEPD 1090
Query: 349 PVKSWKMKQNKENA 362
PVK WK + E+
Sbjct: 1091 PVKDWKQRVATEDG 1104
>gi|348502160|ref|XP_003438637.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-alpha-like
[Oreochromis niloticus]
Length = 1578
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 131/180 (72%), Positives = 152/180 (84%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS+EAKEYFS+M+RHRI FKYSG DD I +AFSKK V+ERK WLT +M R+
Sbjct: 611 GLGTSTSQEAKEYFSDMQRHRIPFKYSGPEDDEAITLAFSKKKVEERKEWLTNFMINRRQ 670
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E + E+YLY ++TK+++Y +FVNKEL+LFSN DNERSIP L DGLKPG RKVL+ C
Sbjct: 671 RREHNLPEEYLYGQSTKSLSYNDFVNKELVLFSNSDNERSIPCLVDGLKPGQRKVLYCCF 730
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGE SLM TII LAQNFVGSNN+NLLQP+GQFGT L
Sbjct: 731 KRNDKREVKVAQLAGSVAEMSAYHHGEVSLMMTIIGLAQNFVGSNNMNLLQPLGQFGTRL 790
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/139 (57%), Positives = 105/139 (75%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+YHTDTTV+FVV M+ +KL +AE GLHKVFKLQ+ L +SM FD G L K+++
Sbjct: 952 DYKDYHTDTTVRFVVKMTEEKLREAEAAGLHKVFKLQSPLTCNSMVLFDHVGSLKKYESV 1011
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +R++YY RKD+L G+LGAE+ KL+NQARFI+EK G L IEN+ KKE+I
Sbjct: 1012 QDILRDFFELRMKYYVLRKDWLAGMLGAESAKLSNQARFILEKIQGTLVIENKPKKELIR 1071
Query: 339 ELIKRKYDSDPVKSWKMKQ 357
L + YDSDPVK+WK Q
Sbjct: 1072 MLQQMGYDSDPVKTWKQAQ 1090
>gi|47226022|emb|CAG04396.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1345
Score = 277 bits (709), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 132/180 (73%), Positives = 151/180 (83%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS+EAKEYFS+M+RHRI FKY+G DD I +AFSKK V+ERK WLT +M R+
Sbjct: 654 GLGTSTSQEAKEYFSDMQRHRIPFKYAGPEDDEAITLAFSKKKVEERKEWLTKFMINRRQ 713
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E + EDYLY +TTK ++Y +FVNKEL+LFSN DNERSIP L DGLKPG RKVLF C
Sbjct: 714 RREHNLPEDYLYGQTTKYLSYNDFVNKELVLFSNSDNERSIPCLVDGLKPGQRKVLFCCF 773
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGE SLM TI+ LAQNFVGSNN+NLLQP+GQFGT L
Sbjct: 774 KRNDKREVKVAQLAGSVAEMSAYHHGEVSLMMTIVGLAQNFVGSNNLNLLQPLGQFGTRL 833
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/141 (54%), Positives = 98/141 (69%), Gaps = 8/141 (5%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D+KEYHTDTTV+FVV MS +KL +AE G HKVFKLQ L +SM R V +
Sbjct: 995 DFKEYHTDTTVRFVVRMSEEKLREAEAAGFHKVFKLQNPLTCNSMPEEVR--VCAGYS-- 1050
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
++F+ +R++YY RKD+L G+LGAE+ KLTNQARFI+EK G L IEN+ KKE+I
Sbjct: 1051 ----QDFFELRMKYYVLRKDWLVGMLGAESAKLTNQARFILEKIQGTLVIENKPKKELIR 1106
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
L + YDSDPVK+WK+ Q K
Sbjct: 1107 MLQQMGYDSDPVKAWKLAQEK 1127
>gi|17535065|ref|NP_496536.1| Protein TOP-2 [Caenorhabditis elegans]
gi|6175065|sp|Q23670.2|TOP2_CAEEL RecName: Full=Probable DNA topoisomerase 2; AltName: Full=DNA
topoisomerase II
gi|3878527|emb|CAA88867.1| Protein TOP-2 [Caenorhabditis elegans]
Length = 1520
Score = 277 bits (708), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 127/180 (70%), Positives = 150/180 (83%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF +M RHRI FKY+G +DD + MAFSKK ++ERK WL+ WM E +
Sbjct: 650 GLGTSTSKEAKEYFLDMVRHRIRFKYNGADDDNAVDMAFSKKKIEERKDWLSKWMREKKD 709
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK+ G+ E+YLY K T+ +T+ +FVN+EL+LFSN+DNERSIP L DG KPG RKVLF C
Sbjct: 710 RKQQGLAEEYLYNKDTRFVTFKDFVNRELVLFSNLDNERSIPCLVDGFKPGQRKVLFACF 769
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR D+REVKVAQLAG+VAE SAYHHGEQSLM TI+NLAQ++VGSNNINLL PIGQFGT L
Sbjct: 770 KRADKREVKVAQLAGAVAEISAYHHGEQSLMGTIVNLAQDYVGSNNINLLLPIGQFGTRL 829
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 96/140 (68%), Gaps = 1/140 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEM-DGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
DYKEYHTDTTVKFVV +SP KL + E LH+VFKLQ + + M FD G L + +
Sbjct: 991 DYKEYHTDTTVKFVVKLSPGKLRELERGQDLHQVFKLQAVINTTCMVLFDAAGCLRTYTS 1050
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
I +EFY R E Y +RK+YL GVL A++ +LTNQARFI+ K + ++ +EN+KK ++
Sbjct: 1051 PEAITQEFYDSRQEKYVQRKEYLLGVLQAQSKRLTNQARFILAKINNEIVLENKKKAAIV 1110
Query: 338 AELIKRKYDSDPVKSWKMKQ 357
LIK K+D+DPVK WK +Q
Sbjct: 1111 DVLIKMKFDADPVKKWKEEQ 1130
>gi|317419224|emb|CBN81261.1| DNA topoisomerase 2-alpha, partial [Dicentrarchus labrax]
Length = 968
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 131/180 (72%), Positives = 151/180 (83%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS+EAKEYFS+M+RHRI FKY+G DD I +AFSKK V+ERK WLT +M R+
Sbjct: 602 GLGTSTSQEAKEYFSDMQRHRIPFKYAGPEDDEAITLAFSKKKVEERKEWLTNFMVNRRQ 661
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E + EDYLY + TK+++Y +FVNKEL+LFSN DNERSIP L DGLKPG RKVLF C
Sbjct: 662 RREHNLPEDYLYGQATKSLSYNDFVNKELVLFSNSDNERSIPCLVDGLKPGQRKVLFCCF 721
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGE SLM TI+ LAQNFVGSNN+NLLQP+GQFGT L
Sbjct: 722 KRNDKREVKVAQLAGSVAEMSAYHHGEVSLMMTIVGLAQNFVGSNNMNLLQPLGQFGTRL 781
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 23/26 (88%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAE 244
D++EYHTDTTV+FV+ M+ +KL +AE
Sbjct: 943 DFREYHTDTTVRFVIKMTEEKLREAE 968
>gi|56269784|gb|AAH86970.1| Top2a protein [Danio rerio]
gi|197247280|gb|AAI65253.1| Top2a protein [Danio rerio]
Length = 1570
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 128/180 (71%), Positives = 152/180 (84%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYFS+M RHRI FKYSG DD I +AFSKK+++ERK WLT++M R+
Sbjct: 614 GLGTSTSKEAKEYFSDMTRHRIPFKYSGPADDEAITLAFSKKMIEERKEWLTSFMINRRQ 673
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E + E+YLY + TK+++Y +F+NKEL+LFSN DNERSIP + DGLKPG RKV+F C
Sbjct: 674 RREHNLPEEYLYGQETKSLSYHDFINKELVLFSNSDNERSIPCMVDGLKPGQRKVVFCCF 733
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGE SLM TI+ LAQNFVGSNN+NLLQP+GQFGT L
Sbjct: 734 KRNDKREVKVAQLAGSVAEMSAYHHGEVSLMMTIVGLAQNFVGSNNLNLLQPLGQFGTRL 793
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/135 (59%), Positives = 102/135 (75%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTDTTV+FVV M+ ++L +AE GLHKVFKLQ L +SM FD G L K+++
Sbjct: 955 DYKEYHTDTTVRFVVKMTEERLREAEAAGLHKVFKLQNLLTCNSMVLFDHVGSLKKYESV 1014
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILKEF+ +R++YY RKD+L G+LGAE+ KL+NQARFI+EK G L IEN+ KKE+I
Sbjct: 1015 QDILKEFFELRMKYYVLRKDWLVGMLGAESAKLSNQARFILEKIQGTLVIENKPKKELIR 1074
Query: 339 ELIKRKYDSDPVKSW 353
L + YDSDPVK+W
Sbjct: 1075 MLQQMGYDSDPVKAW 1089
>gi|51467892|ref|NP_001003834.1| DNA topoisomerase 2-alpha [Danio rerio]
gi|49619131|gb|AAT68150.1| topoisomerase 2 [Danio rerio]
Length = 1574
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 128/180 (71%), Positives = 152/180 (84%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYFS+M RHRI FKYSG DD I +AFSKK+++ERK WLT++M R+
Sbjct: 614 GLGTSTSKEAKEYFSDMTRHRIPFKYSGPADDEAITLAFSKKMIEERKEWLTSFMINRRQ 673
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E + E+YLY + TK+++Y +F+NKEL+LFSN DNERSIP + DGLKPG RKV+F C
Sbjct: 674 RREHNLPEEYLYGQETKSLSYHDFINKELVLFSNSDNERSIPCMVDGLKPGQRKVVFCCF 733
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND+REVKVAQLAGSVAE SAYHHGE SLM TI+ LAQNFVGSNN+NLLQP+GQFGT L
Sbjct: 734 KRNDKREVKVAQLAGSVAEMSAYHHGEVSLMMTIVGLAQNFVGSNNLNLLQPLGQFGTRL 793
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/135 (59%), Positives = 102/135 (75%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTDTTV+FVV M+ ++L +AE GLHKVFKLQ L +SM FD G L K+++
Sbjct: 959 DYKEYHTDTTVRFVVKMTEERLREAEAAGLHKVFKLQNLLTCNSMVLFDHVGSLKKYESV 1018
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILKEF+ +R++YY RKD+L G+LGAE+ KL+NQARFI+EK G L IEN+ KKE+I
Sbjct: 1019 QDILKEFFELRMKYYVLRKDWLVGMLGAESAKLSNQARFILEKIQGTLVIENKPKKELIR 1078
Query: 339 ELIKRKYDSDPVKSW 353
L + YDSDPVK+W
Sbjct: 1079 MLQQMGYDSDPVKAW 1093
>gi|115534553|ref|NP_503483.2| Protein Y46H3C.4 [Caenorhabditis elegans]
gi|351064298|emb|CCD72654.1| Protein Y46H3C.4 [Caenorhabditis elegans]
Length = 616
Score = 273 bits (699), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 155/372 (41%), Positives = 215/372 (57%), Gaps = 48/372 (12%)
Query: 27 MERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRRRKEMGIGEDYLYTKTT 86
M+RHRI FKY+G + I M FSKK +ERK WL+ WM E + RK+ G+ E+YLY K T
Sbjct: 1 MDRHRIRFKYNGAD---AIDMVFSKKKSEERKDWLSKWMREKKDRKQQGLAEEYLYDKDT 57
Query: 87 KAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGS 146
+ +T+ +FVN+EL+LFSN+DNERSIP L DG KPG RKVLF C KR+D+ VKVAQLAG
Sbjct: 58 RFVTFKDFVNRELVLFSNLDNERSIPCLVDGFKPGQRKVLFACFKRSDKHGVKVAQLAGG 117
Query: 147 VAEHSAYHHGEQSLMSTIINLAQNFVGSNNINL------LQPIGQF-------GTFLFIF 193
VA+ SAYHHGEQSLM+TI++LAQ++ G ++ + L P+ + F++
Sbjct: 118 VADMSAYHHGEQSLMTTIVHLAQDYGGKDSASAQYIFTQLSPVTRTLFPSHDDNVLRFLY 177
Query: 194 ESTN---------LSGAV-VNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLHKA 243
E +S V VN GWR +Y +K ++ P K
Sbjct: 178 EENQRIEPEWYCPISPMVLVNGAQGIDTGWRTNIPNYNPRELVKNIKRLIAGEPQKA--- 234
Query: 244 EMDGLHKVFK------------------LQTTLAISSMCAFDRYGVLTKFDTTNQILKEF 285
+ +K F+ LQ+ + +SSM FD G L + I +EF
Sbjct: 235 -LAPWYKNFRGKIIQIDPRRFACYGEVALQSVICMSSMVLFDAAGCLRTSTSPEAITQEF 293
Query: 286 YAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKY 345
Y R E Y +RK+YL VL A++ +LTNQARFI+ K + ++ EN+KK ++ +LIK +
Sbjct: 294 YDSRQEKYLQRKEYLLEVLQAQSKRLTNQARFILAKINKEIVFENKKKVAIVDDLIKMGF 353
Query: 346 DSDPVKSWKMKQ 357
D+DPVK WK +Q
Sbjct: 354 DADPVKKWKEEQ 365
>gi|196000919|ref|XP_002110327.1| hypothetical protein TRIADDRAFT_23201 [Trichoplax adhaerens]
gi|190586278|gb|EDV26331.1| hypothetical protein TRIADDRAFT_23201, partial [Trichoplax
adhaerens]
Length = 1164
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/180 (70%), Positives = 146/180 (81%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST KEAKEYF++M RHR+ F+Y G++DD I++AFSKK++ ERK WL ME+ +
Sbjct: 604 GLGTSTPKEAKEYFADMSRHRVAFRYDGNDDDTAIQLAFSKKMISERKEWLNKSMEDKKN 663
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK E YLY K I+Y++FVNKELI FSN DN RSIPSL DGLKPG RKVLFTC
Sbjct: 664 RKLNNKPEPYLYGKEVSDISYSDFVNKELIHFSNADNIRSIPSLMDGLKPGQRKVLFTCF 723
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRND++++KVAQLAGSVAE SAYHHGE SLM TIINLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 724 KRNDKKDIKVAQLAGSVAEMSAYHHGEASLMGTIINLAQNFVGSNNINLLQPIGQFGTRL 783
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 109/158 (68%), Gaps = 1/158 (0%)
Query: 200 GAVVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLA 259
G + L G F SN YKEYHTDTTV+F+VT++ + AE GL K FKL+ + +
Sbjct: 927 GVLEPMLHGGEKTPSFISN-YKEYHTDTTVRFIVTLTEANMEAAEKIGLLKKFKLEGSFS 985
Query: 260 ISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIV 319
+SM FD +G L ++ +ILKEFY +LE+Y KRK++LEG+L AE+ KL+NQARFI+
Sbjct: 986 TNSMVLFDAHGCLRRYGNAQEILKEFYETKLEFYVKRKEWLEGLLEAESRKLSNQARFIL 1045
Query: 320 EKCDGDLRIENRKKKEMIAELIKRKYDSDPVKSWKMKQ 357
EK DG L IEN+ K+++IA L +DSDPVKSW+ KQ
Sbjct: 1046 EKIDGKLAIENKSKRDLIAMLKSANFDSDPVKSWQNKQ 1083
>gi|449669861|ref|XP_002158728.2| PREDICTED: DNA topoisomerase 2-beta-like, partial [Hydra
magnipapillata]
Length = 1330
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 124/178 (69%), Positives = 146/178 (82%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLG+STS E KEYFS+M+RHRI+F+Y G + D + +AFSKK +ERK WL + E +
Sbjct: 612 GLGSSTSIEGKEYFSDMQRHRIVFEYDGPSSDEALILAFSKKCANERKNWLDNGLAERKL 671
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E G+ E YLY K T+ +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFTC+
Sbjct: 672 RREAGLPEVYLYEKGTRTVTYQDFINKELILFSNTDNERSIPSLVDGFKPGQRKVLFTCM 731
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRND+REVKVAQLAGSVAE SAYHHGE SLM TI+NLAQNFVGSNN+N+L PIGQFGT
Sbjct: 732 KRNDKREVKVAQLAGSVAELSAYHHGEMSLMGTIVNLAQNFVGSNNLNVLLPIGQFGT 789
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 108/145 (74%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTD+TVKFV+TM+P+++ KAE +GLHK FKL +++ +S M FD +G + K+++
Sbjct: 953 DYKEYHTDSTVKFVITMTPEQMVKAEEEGLHKKFKLLSSINLSCMVLFDEFGCIKKYESP 1012
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I+K F+ VR+ Y +RK ++ G+L AE KL NQARFI+EK +G + IENR K+++I
Sbjct: 1013 TEIMKAFFNVRMAKYNERKKFILGMLEAECSKLENQARFILEKIEGKIIIENRSKRDVIT 1072
Query: 339 ELIKRKYDSDPVKSWKMKQNKENAL 363
L++R Y SDPVK+WK + +K L
Sbjct: 1073 TLVERGYVSDPVKAWKAEVDKSGHL 1097
>gi|114145437|ref|NP_001041456.1| transcription factor [Ciona intestinalis]
gi|93003262|tpd|FAA00214.1| TPA: transcription factor protein [Ciona intestinalis]
Length = 1538
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/183 (67%), Positives = 149/183 (81%), Gaps = 4/183 (2%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEE--- 67
GLGTSTSKEAK YF++M RHR+ F+YSG DD I MAF++K D+RK WLT +MEE
Sbjct: 605 GLGTSTSKEAKSYFADMLRHRVRFRYSGAGDDGCIDMAFNRKRADDRKEWLTNFMEERRL 664
Query: 68 CRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLF 127
CR G D LY+ T+ ++Y++F+NKEL++FS D ERS+PSLCDGLKPG RKVL+
Sbjct: 665 CRLDDRPEPGTD-LYSADTRTLSYSDFINKELVMFSCADLERSVPSLCDGLKPGQRKVLY 723
Query: 128 TCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFG 187
TCL+RND+REVKVAQLAGSVAE SAYHHGEQSL+ TIIN+AQN+VGSNN+NLLQPIGQFG
Sbjct: 724 TCLRRNDKREVKVAQLAGSVAELSAYHHGEQSLLGTIINMAQNYVGSNNLNLLQPIGQFG 783
Query: 188 TFL 190
T L
Sbjct: 784 TRL 786
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/137 (54%), Positives = 97/137 (70%), Gaps = 1/137 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAIS-SMCAFDRYGVLTKFDT 277
+YKEY+TD TV+F+V M DKL E GLHK LQ +L+ + ++ FD +G L KF+T
Sbjct: 948 EYKEYNTDITVRFLVKMGADKLKTMERSGLHKFLSLQNSLSCNNTLVLFDEFGRLRKFNT 1007
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
T +IL EFY +R + Y KRKD+L G+L AEA KLTNQARFIVEK +G + I N+ KK +I
Sbjct: 1008 TVEILLEFYKIRSKLYEKRKDFLTGLLTAEAAKLTNQARFIVEKIEGKISIFNKPKKVLI 1067
Query: 338 AELIKRKYDSDPVKSWK 354
L+ YDSDPVK+WK
Sbjct: 1068 KMLVDNNYDSDPVKAWK 1084
>gi|7025462|gb|AAF35892.1| topoisomerase II [Mytilus edulis]
Length = 226
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 115/157 (73%), Positives = 134/157 (85%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYFS+M++H+I FKY G DDA I +AFSKK ++ERK WLT +M E +R
Sbjct: 70 GLGTSTAKEAKEYFSDMDKHKIPFKYQGTEDDASITLAFSKKKIEERKEWLTNFMVERKR 129
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R EMG+ E YLY K TK I+Y EF+N+EL+LFSNMDNERSIPSL DGLKPG RKV+FTC+
Sbjct: 130 RLEMGLPEVYLYGKETKHISYNEFINRELVLFSNMDNERSIPSLVDGLKPGQRKVIFTCI 189
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINL 167
KRN RE+KVAQLAGSVAE S+YHHGEQSLMSTIINL
Sbjct: 190 KRNLIRELKVAQLAGSVAEQSSYHHGEQSLMSTIINL 226
>gi|260807655|ref|XP_002598624.1| hypothetical protein BRAFLDRAFT_67020 [Branchiostoma floridae]
gi|229283897|gb|EEN54636.1| hypothetical protein BRAFLDRAFT_67020 [Branchiostoma floridae]
Length = 1181
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 122/202 (60%), Positives = 145/202 (71%), Gaps = 21/202 (10%)
Query: 4 IHDVMIAGLGTSTSKEAKEYFSNMERHRIL--------FKYSGDNDDAHIR--------- 46
I D + G +S+ A+ N E + ++ KY + D +R
Sbjct: 55 ITDAAVPG----SSRPARPIMENAEINNVIKIMGLQYKRKYESEEDMKSLRYGKIMIMTD 110
Query: 47 MAFSKKLVDERKTWLTTWMEECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMD 106
AF+KK VD RK WLT WM++ ++R+EMG+GE +LY K TK +T+ EFV+KEL+LFSN D
Sbjct: 111 QAFNKKKVDNRKEWLTNWMQDRKQRREMGLGEQFLYGKDTKYLTFNEFVHKELVLFSNSD 170
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIIN 166
NERSIPSL DGLKPG RKVLFTCLKRND+REVKVAQLAGSVAE SAYHHGE SLM TIIN
Sbjct: 171 NERSIPSLVDGLKPGQRKVLFTCLKRNDKREVKVAQLAGSVAEMSAYHHGETSLMGTIIN 230
Query: 167 LAQNFVGSNNINLLQPIGQFGT 188
LAQNFVGSNN+NLLQPIGQFGT
Sbjct: 231 LAQNFVGSNNVNLLQPIGQFGT 252
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 70/93 (75%)
Query: 266 FDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGD 325
FD G L +++ +QIL+EF+ +RLE+Y KRKD+L G+L AEA KL NQARFI+EK +G
Sbjct: 544 FDHNGCLRTYNSVHQILQEFFDLRLEWYTKRKDWLMGMLEAEASKLNNQARFILEKIEGK 603
Query: 326 LRIENRKKKEMIAELIKRKYDSDPVKSWKMKQN 358
L IEN+ K+E+I L R YDSDPVK+WK QN
Sbjct: 604 LVIENKPKRELIQMLQARGYDSDPVKAWKETQN 636
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 60/75 (80%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTDTTV+FVV+M+ ++L KAE GLHKVFKLQ+ +A ++M FD G L +++
Sbjct: 416 DYKEYHTDTTVRFVVSMTEEQLMKAEAAGLHKVFKLQSNIASTNMVLFDHNGCLRTYNSV 475
Query: 279 NQILKEFYAVRLEYY 293
+QIL+EF+ +RL+++
Sbjct: 476 HQILQEFFDLRLQWF 490
>gi|338711459|ref|XP_003362534.1| PREDICTED: DNA topoisomerase 2-alpha-like [Equus caballus]
Length = 1485
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/154 (72%), Positives = 130/154 (84%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI FKYSG DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 615 GLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTHFMEDRRQ 674
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK +G+ EDYLY +TT +TY +F+NKELILFSN DNERSIPS+ DGLKPG RKVLFTC
Sbjct: 675 RKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCF 734
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTI 164
KRND+REVKVAQLAGSVAE S+YHHGE + S I
Sbjct: 735 KRNDKREVKVAQLAGSVAEMSSYHHGEVNTQSMI 768
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFVV M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 913 DYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 972
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 973 LDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 1032
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 1033 VLIQRGYDSDPVKAWKEAQQK 1053
>gi|47216863|emb|CAG11670.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1568
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/141 (73%), Positives = 121/141 (85%)
Query: 48 AFSKKLVDERKTWLTTWMEECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDN 107
AFSKK D+RK WLT +ME+ R+R+ G+ E YLY + ++Y +F+NKELILFSN DN
Sbjct: 787 AFSKKKTDDRKEWLTNFMEDRRQRRMHGLPEQYLYGSQARHLSYNDFINKELILFSNSDN 846
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINL 167
ERSIPSL DGLKPG RKVLFTCLKRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NL
Sbjct: 847 ERSIPSLVDGLKPGQRKVLFTCLKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNL 906
Query: 168 AQNFVGSNNINLLQPIGQFGT 188
AQNFVGSNN+N+LQP+GQFGT
Sbjct: 907 AQNFVGSNNLNILQPLGQFGT 927
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 79/153 (51%), Positives = 108/153 (70%), Gaps = 10/153 (6%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCA----------FD 267
+DYKEYHTDTTVKF+V MS +KL +AE GLHKVFKLQ++L +SM FD
Sbjct: 1090 SDYKEYHTDTTVKFLVRMSEEKLAQAEAAGLHKVFKLQSSLTCNSMVTACFHRPEHVLFD 1149
Query: 268 RYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLR 327
G L ++++ ILKEF+ +RL YY R+D+L G LGAEA KL+NQARF++EK +G +
Sbjct: 1150 HMGCLKRYESVQDILKEFFELRLHYYKLRRDWLVGSLGAEAAKLSNQARFVLEKIEGKIS 1209
Query: 328 IENRKKKEMIAELIKRKYDSDPVKSWKMKQNKE 360
IEN+ K+E+I L+++ ++SDPV +W Q KE
Sbjct: 1210 IENKSKRELIRMLVQKGFESDPVAAWTRAQEKE 1242
>gi|320166777|gb|EFW43676.1| DNA topoisomerase II [Capsaspora owczarzaki ATCC 30864]
Length = 1628
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 113/180 (62%), Positives = 133/180 (73%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS+EAKEYFSNM+ H+I F +SG++D I +AFSKK D+RK WL R
Sbjct: 631 GLGTSTSQEAKEYFSNMDVHQIPFTWSGEDDGQAIDLAFSKKRADDRKEWL--------R 682
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ G D+ T+AITY+EF+NKELILFS DN RSIPS+ DG KP RKVLF C
Sbjct: 683 QFRAGTFLDH----QTEAITYSEFINKELILFSMADNVRSIPSVVDGFKPSQRKVLFACF 738
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN + E+KVAQLAG VAEHSAYHHGE SL TI+N+AQN+ GSNNINLL P+GQFGT L
Sbjct: 739 KRNLKDEIKVAQLAGYVAEHSAYHHGEVSLAGTIVNMAQNYTGSNNINLLLPLGQFGTRL 798
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 102/197 (51%), Gaps = 20/197 (10%)
Query: 180 LQPIGQFGTFLFIFESTNLSGAVVNALDFGSGGWR----------FESN----------D 219
++P+G+ F T LS + + G W E N D
Sbjct: 903 IEPLGKADRFRVCGRITKLSATTLEITELPIGVWTQSYKEELEKLMEPNEKDKTPGFIKD 962
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTN 279
++E HTDT+V F VT+S + + AE GL K FK+ +T++ ++M FD G + K+D+
Sbjct: 963 FRENHTDTSVHFTVTLSEENMAAAEAMGLAKKFKIDSTISTANMVFFDAEGRIKKYDSPQ 1022
Query: 280 QILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAE 339
IL++FY +RL+YY KRK +L L E +L N+ RFI GDL I NRK+ +++ +
Sbjct: 1023 AILRDFYDLRLKYYQKRKSWLVERLTEEWTRLDNKVRFIQAVIKGDLVISNRKRADLMRD 1082
Query: 340 LIKRKYDSDPVKSWKMK 356
L R Y + + K+K
Sbjct: 1083 LKTRGYTAFSTSTKKIK 1099
>gi|156347131|ref|XP_001621647.1| hypothetical protein NEMVEDRAFT_v1g144180 [Nematostella vectensis]
gi|156207799|gb|EDO29547.1| predicted protein [Nematostella vectensis]
Length = 170
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 107/147 (72%), Positives = 121/147 (82%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST KEAKEYFS+MERH+I FKY G +DD I MAFSKK + ERK WLT +EE +
Sbjct: 21 GLGTSTPKEAKEYFSDMERHKINFKYEGPHDDEAIVMAFSKKKIQERKDWLTRGLEERKW 80
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E G+ E YLY K TK ++Y +FVNKELILFSN DNERSIPSL DGLKPG RKV+FTC
Sbjct: 81 RREQGLSELYLYEKDTKRVSYCDFVNKELILFSNTDNERSIPSLVDGLKPGQRKVMFTCF 140
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGE 157
KRND+REVKVAQLAGS+AE SAYHHGE
Sbjct: 141 KRNDKREVKVAQLAGSIAELSAYHHGE 167
>gi|212645657|ref|NP_495440.4| Protein CIN-4 [Caenorhabditis elegans]
gi|158514533|gb|ABW69249.1| chromosome instability 4 [Caenorhabditis elegans]
gi|373220462|emb|CCD73727.1| Protein CIN-4 [Caenorhabditis elegans]
Length = 842
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 109/180 (60%), Positives = 136/180 (75%), Gaps = 3/180 (1%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGT TSKEAK+ FS+M RHRI FKY+G +DD + MAFSKK ++ R +L M++ +
Sbjct: 217 GLGTLTSKEAKKCFSDMVRHRIRFKYNGADDDKAVNMAFSKKKIEARTDYLMKLMQDKNQ 276
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK+ G+ E+ LY K T+ +T +F N E++ N+ SIP L DGLKPG RKVLF C
Sbjct: 277 RKQQGLAEECLYNKETRFVTLKDFFNYEIVCSWNL---HSIPCLVDGLKPGQRKVLFACF 333
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR ++REVKVAQLAG+VAE SAYHHGEQSLM TI+NLAQ++VGS+NINLL PIGQFGT L
Sbjct: 334 KRANKREVKVAQLAGAVAEISAYHHGEQSLMGTIVNLAQDYVGSHNINLLLPIGQFGTRL 393
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/140 (50%), Positives = 93/140 (66%), Gaps = 1/140 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEM-DGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
DYKEYHTDTTVKFVV +SP KL + E LH+VFKLQ + + M FD G L + +
Sbjct: 555 DYKEYHTDTTVKFVVKLSPGKLRELERGQDLHQVFKLQAVINTTCMVLFDAAGWLRTYTS 614
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
I +EFY R E Y +RK+YL GVL A++ +LTNQARFI+ + + +EN+KK ++
Sbjct: 615 PEAITQEFYDSRQEKYVQRKEYLLGVLQAQSKRLTNQARFILATINNKIVLENKKKTAIV 674
Query: 338 AELIKRKYDSDPVKSWKMKQ 357
LIK K+D+DPVK WK Q
Sbjct: 675 DVLIKMKFDADPVKKWKEDQ 694
>gi|46370596|gb|AAS90120.1| DNA topoisomerase type 2 [Tetrahymena thermophila]
Length = 1662
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 133/178 (74%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST +EA+EYF N+ +H I FKY+G +D+ I +AF+KK ++RK WL + E
Sbjct: 586 GLGTSTDQEAQEYFGNINKHVISFKYNGKDDEDAIDLAFNKKRAEDRKKWLVKYDPE--- 642
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E+ +++ K +TY +FVNKELI FSN DN RSIPSLCDGLKPG RK+LF C
Sbjct: 643 -------ENVDHSQ--KHLTYKDFVNKELINFSNSDNARSIPSLCDGLKPGQRKILFACF 693
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + E+KVAQL+G VAEHSAYHHGEQSL STI+ +AQ+FVG+NNIN L PIGQFG+
Sbjct: 694 KRNLKNEIKVAQLSGYVAEHSAYHHGEQSLESTIVGMAQSFVGTNNINYLMPIGQFGS 751
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 85/144 (59%), Gaps = 4/144 (2%)
Query: 216 ESNDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKF 275
E D KEYH V FVV MS ++ K + +G+ K FKLQ+T+ ++M F+ G LT++
Sbjct: 911 EIEDIKEYHAGNRVHFVVKMSEKQMEKVQREGIDKYFKLQSTIPTTNMVLFNHEGKLTRY 970
Query: 276 DTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKE 335
+I++EFY VRL Y +RK+YL + + L+N+ RFI+ + +R+ N K+K+
Sbjct: 971 ANICEIMEEFYEVRLNAYKRRKEYLVSKIERDLEILSNKKRFILAVINESIRVRNAKRKD 1030
Query: 336 MIAELIKRKY----DSDPVKSWKM 355
+I EL + Y D +KS K+
Sbjct: 1031 LIKELSVQGYVQMKDMPKIKSSKL 1054
>gi|146182234|ref|XP_001024182.2| DNA gyrase/topoisomerase IV, A subunit family protein [Tetrahymena
thermophila]
gi|146143912|gb|EAS03937.2| DNA gyrase/topoisomerase IV, A subunit family protein [Tetrahymena
thermophila SB210]
Length = 1680
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 133/178 (74%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST +EA+EYF N+ +H I FKY+G +D+ I +AF+KK ++RK WL + E
Sbjct: 604 GLGTSTDQEAQEYFGNINKHVISFKYNGKDDEDAIDLAFNKKRAEDRKKWLVKYDPE--- 660
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E+ +++ K +TY +FVNKELI FSN DN RSIPSLCDGLKPG RK+LF C
Sbjct: 661 -------ENVDHSQ--KHLTYKDFVNKELINFSNSDNARSIPSLCDGLKPGQRKILFACF 711
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + E+KVAQL+G VAEHSAYHHGEQSL STI+ +AQ+FVG+NNIN L PIGQFG+
Sbjct: 712 KRNLKNEIKVAQLSGYVAEHSAYHHGEQSLESTIVGMAQSFVGTNNINYLMPIGQFGS 769
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 85/144 (59%), Gaps = 4/144 (2%)
Query: 216 ESNDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKF 275
E D KEYH V FVV MS ++ K + +G+ K FKLQ+T+ ++M F+ G LT++
Sbjct: 929 EIEDIKEYHAGNRVHFVVKMSEKQMEKVQREGIDKYFKLQSTIPTTNMVLFNHEGKLTRY 988
Query: 276 DTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKE 335
+I++EFY VRL Y +RK+YL + + L+N+ RFI+ + +R+ N K+K+
Sbjct: 989 ANICEIMEEFYEVRLNAYKRRKEYLVSKIERDLEILSNKKRFILAVINESIRVRNAKRKD 1048
Query: 336 MIAELIKRKY----DSDPVKSWKM 355
+I EL + Y D +KS K+
Sbjct: 1049 LIKELSVQGYVQMKDMPKIKSSKL 1072
>gi|118398165|ref|XP_001031412.1| DNA gyrase/topoisomerase IV, A subunit family protein [Tetrahymena
thermophila]
gi|89285740|gb|EAR83749.1| DNA gyrase/topoisomerase IV, A subunit family protein [Tetrahymena
thermophila SB210]
Length = 1416
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 125/178 (70%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST KEAKEYFSN +H+I F+Y +ND I + FS K + ERK WL +
Sbjct: 595 GLGTSTDKEAKEYFSNFYKHQINFQYLDENDMEAIELGFSGKKIKERKDWLANY------ 648
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ K + Y +F+++ELI FSN DN RSIPSLCDGLKPG RK+LF+C
Sbjct: 649 ------DPNSFVDYNIKQLRYKDFIDRELIHFSNADNLRSIPSLCDGLKPGQRKILFSCF 702
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + E+KVAQL G VAEHSAYHHGEQSL STII +AQNFVGSNNINL+ PIGQFGT
Sbjct: 703 KRNLKSEIKVAQLIGYVAEHSAYHHGEQSLASTIIGMAQNFVGSNNINLMMPIGQFGT 760
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Query: 216 ESNDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKF 275
E D +EYHT+ V F V P ++ + + K KL TT+ +++ F+ L ++
Sbjct: 920 EIEDIREYHTNNRVHFEVQAIPGRIQ--QWGDIEKKLKLSTTMQTTNIVMFNDKYKLKRY 977
Query: 276 DTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKE 335
+T +I++EFYA+RL+ Y KRKDYL + + L N+ +FI +G L I N +KK
Sbjct: 978 QSTVEIMEEFYALRLKCYQKRKDYLVSKIQRDVDILQNKMKFITLVVNGTLEIRNARKKG 1037
Query: 336 MIAEL 340
++ +L
Sbjct: 1038 VLNKL 1042
>gi|405117738|gb|AFR92513.1| DNA topoisomerase II [Cryptococcus neoformans var. grubii H99]
Length = 1247
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 152/421 (36%), Positives = 211/421 (50%), Gaps = 94/421 (22%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS +AK+YFS++++HR+ F+ D I MAF+KK D+RK WL R
Sbjct: 698 GLGTSTSADAKKYFSDLDKHRLAFETMQPEDRQLIDMAFNKKKADDRKEWL--------R 749
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +++ ++FVNKELILFS DN RSIPS+ DGLKPG RKVLF C
Sbjct: 750 QFKPGTYLDH----DVQSLPISDFVNKELILFSMADNIRSIPSVADGLKPGQRKVLFGCF 805
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +E+KVAQLAG V+E +AYHHGE SL STI+ LAQNFVGSNNINLL P GQFGT L
Sbjct: 806 KRNLTKEIKVAQLAGYVSEKTAYHHGEASLTSTIVGLAQNFVGSNNINLLDPNGQFGTRL 865
Query: 191 ----------FIFES-TNLSGAVVNALDFG------SGGWRFESNDYK------------ 221
+IF + ++ A+ + D G G R E + +
Sbjct: 866 AGGKDAASARYIFTNLPRMTRAIFHPADDGLLNYLVEDGMRIEPDYFMPTVPMVLINGAD 925
Query: 222 ---------EYHTDTTVKFV-----------------VTMSPDKL---------HKAEMD 246
E DTT++ +T DK+ H +
Sbjct: 926 GIGTVSGVIEKINDTTLEITELPIRRWTQDFKEMLEEMTTGTDKVPQTIKDYEEHHTDTT 985
Query: 247 GLHKVFKLQTTLAISSMCAFD-RYGVLTKFDTTNQI-----------------LKEFYAV 288
+V + LA + FD R+ + T T N + L+EF+
Sbjct: 986 VHFRVHMTEKNLADAEKEGFDKRFRLTTTLGTGNMVCFDLNGKIKKYASPEEILEEFFHK 1045
Query: 289 RLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKYDSD 348
RLEYY RK +L L + +L+NQARF+ +L + +++ +++ EL K+
Sbjct: 1046 RLEYYGHRKQHLADELNRQFERLSNQARFVHMIITKELVVSGKRRPDIVTELRNLKFRPF 1105
Query: 349 P 349
P
Sbjct: 1106 P 1106
>gi|326427380|gb|EGD72950.1| DNA topoisomerase II [Salpingoeca sp. ATCC 50818]
Length = 1795
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/180 (61%), Positives = 128/180 (71%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST +EAKEYFS+M+ H+I F Y GD D I MAFSKK V+ RK WL ++
Sbjct: 646 GLGTSTPQEAKEYFSHMDDHQIPFSYEGDKDFEDIVMAFSKKHVEARKQWLKNFVPGT-- 703
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
YL T AI Y++F+NKELILFS DN RSIPS+ DGLKPG RKVLF+C
Sbjct: 704 ---------YL-DHATDAICYSDFINKELILFSMADNVRSIPSIMDGLKPGQRKVLFSCF 753
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR + E+KVAQLAG V+EHSAYHHGE SL TI+ +AQ FVGSNN+NLL PIGQFGT L
Sbjct: 754 KRKLKDEIKVAQLAGYVSEHSAYHHGEMSLAGTIVGMAQRFVGSNNLNLLLPIGQFGTRL 813
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 84/122 (68%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
++ +YHTDTTV+FVV+M+P+++ AE GL+KVFKL+ +++ S+M FD G + K++
Sbjct: 974 EFSQYHTDTTVRFVVSMTPEQMQAAETKGLYKVFKLEGSISTSNMTLFDPQGRIKKYEGV 1033
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL++F+ VRL Y KRK L + +E K+ N+ RFI++ G L I NRKK +++
Sbjct: 1034 QEILRDFFDVRLRLYQKRKSLLADCMTSEYKKMDNKVRFILDVISGSLVISNRKKADILQ 1093
Query: 339 EL 340
EL
Sbjct: 1094 EL 1095
>gi|326427379|gb|EGD72949.1| DNA topoisomerase II, variant [Salpingoeca sp. ATCC 50818]
Length = 1761
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/180 (61%), Positives = 128/180 (71%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST +EAKEYFS+M+ H+I F Y GD D I MAFSKK V+ RK WL ++
Sbjct: 612 GLGTSTPQEAKEYFSHMDDHQIPFSYEGDKDFEDIVMAFSKKHVEARKQWLKNFVPGT-- 669
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
YL T AI Y++F+NKELILFS DN RSIPS+ DGLKPG RKVLF+C
Sbjct: 670 ---------YL-DHATDAICYSDFINKELILFSMADNVRSIPSIMDGLKPGQRKVLFSCF 719
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR + E+KVAQLAG V+EHSAYHHGE SL TI+ +AQ FVGSNN+NLL PIGQFGT L
Sbjct: 720 KRKLKDEIKVAQLAGYVSEHSAYHHGEMSLAGTIVGMAQRFVGSNNLNLLLPIGQFGTRL 779
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 84/122 (68%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
++ +YHTDTTV+FVV+M+P+++ AE GL+KVFKL+ +++ S+M FD G + K++
Sbjct: 940 EFSQYHTDTTVRFVVSMTPEQMQAAETKGLYKVFKLEGSISTSNMTLFDPQGRIKKYEGV 999
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL++F+ VRL Y KRK L + +E K+ N+ RFI++ G L I NRKK +++
Sbjct: 1000 QEILRDFFDVRLRLYQKRKSLLADCMTSEYKKMDNKVRFILDVISGSLVISNRKKADILQ 1059
Query: 339 EL 340
EL
Sbjct: 1060 EL 1061
>gi|301110016|ref|XP_002904088.1| DNA topoisomerase 2 [Phytophthora infestans T30-4]
gi|262096214|gb|EEY54266.1| DNA topoisomerase 2 [Phytophthora infestans T30-4]
Length = 1505
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 111/181 (61%), Positives = 126/181 (69%), Gaps = 12/181 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+ E KEYFS+++ H+I F Y GD D I MAFSKK V++RK WL R
Sbjct: 675 GLGTSTAAETKEYFSDLQTHQIGFTYDGDGDADVIDMAFSKKRVEDRKDWL--------R 726
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G DY + YTEFVNKELILFS DN RSIPS+ DG KP RKVLF C
Sbjct: 727 GYEPGTYVDY----DVDEMGYTEFVNKELILFSMADNIRSIPSVMDGFKPSQRKVLFCCF 782
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R E+KVAQLAG V+EHSAYHHGE SL I+N+AQ+FVGSNNI+LL PIGQFGT L
Sbjct: 783 KRNLRAELKVAQLAGYVSEHSAYHHGEASLQGCIVNMAQDFVGSNNIHLLSPIGQFGTRL 842
Query: 191 F 191
Sbjct: 843 M 843
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 79/130 (60%), Gaps = 2/130 (1%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKA--EMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
D+KE HTD V F +TM P L G+ K FKL+++L+ S+M FD G + K++
Sbjct: 1004 DFKENHTDVKVLFTITMEPKALSDVTKAPGGIVKKFKLESSLSTSNMHLFDAAGHIKKYE 1063
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
+I+ EFY +RLEYY +RK + L + L+N+ARF++ +G L + NRKK+E+
Sbjct: 1064 NPKEIMAEFYGIRLEYYGRRKKAMLQKLQDQIKLLSNKARFVLAVVEGKLVVNNRKKQEL 1123
Query: 337 IAELIKRKYD 346
+ EL+ YD
Sbjct: 1124 LEELMAEGYD 1133
>gi|358337562|dbj|GAA55912.1| DNA topoisomerase II [Clonorchis sinensis]
Length = 2034
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/162 (62%), Positives = 126/162 (77%), Gaps = 10/162 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ KEAK+YFS+M RHRI F+Y+G DDA I++AF + ERK WLT+W E +R
Sbjct: 773 GLGTSSGKEAKQYFSDMIRHRIRFRYTGSEDDASIQLAFDRSKASERKNWLTSWTMERKR 832
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+E+ + E YLY K T+AI+Y +FV+KEL+LFSN+DNERSIPS+ VLFTCL
Sbjct: 833 RRELSLPEPYLYGKDTRAISYHDFVHKELVLFSNLDNERSIPSM----------VLFTCL 882
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFV 172
KRN +E+KVAQLAGSVAE SAYHHGEQSL+ TI+ LAQNFV
Sbjct: 883 KRNLVKEIKVAQLAGSVAELSAYHHGEQSLLGTIVGLAQNFV 924
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 98/136 (72%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTDTTV+FVV MS +KL +AE GLHK FKL + L +SM FD+ G L +
Sbjct: 1179 DYKEYHTDTTVRFVVKMSAEKLREAEAIGLHKFFKLSSALTTNSMVLFDQLGCLKHYRNV 1238
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ IL+EF+ +RL++Y KRK YLEG+L AEA KL NQARF++EK + IEN+ +KE+I
Sbjct: 1239 DLILREFFDIRLQWYEKRKSYLEGMLAAEARKLENQARFVLEKIQSQISIENKPRKELIQ 1298
Query: 339 ELIKRKYDSDPVKSWK 354
L YDSDPV++WK
Sbjct: 1299 ILKSAAYDSDPVRAWK 1314
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/67 (79%), Positives = 60/67 (89%)
Query: 124 KVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPI 183
+VLFTCLKRN +E+KVAQLAGSVAE SAYHHGEQSL+ TI+ LAQNFVGSNN+N+L PI
Sbjct: 951 QVLFTCLKRNLVKEIKVAQLAGSVAELSAYHHGEQSLLGTIVGLAQNFVGSNNLNVLLPI 1010
Query: 184 GQFGTFL 190
GQFGT L
Sbjct: 1011 GQFGTRL 1017
>gi|46370594|gb|AAS90119.1| DNA topoisomerase type 2 [Tetrahymena thermophila]
Length = 1402
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/178 (58%), Positives = 123/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST KEAKEYFSN +H+I F+Y +ND I + FS K + ERK WL +
Sbjct: 595 GLGTSTDKEAKEYFSNFYKHQINFQYLDENDMEAIELGFSGKKIKERKDWLANY------ 648
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ K + F+++ELI FSN DN RSIPSLCDGLKPG RK+LF+C
Sbjct: 649 ------DPNSFVDYNIKQLRSKXFIDRELIHFSNADNLRSIPSLCDGLKPGQRKILFSCF 702
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + E+KVAQL G VAEHSAYHHGEQSL STII +AQNFVGSNNINL+ PIGQFGT
Sbjct: 703 KRNLKSEIKVAQLIGYVAEHSAYHHGEQSLASTIIGMAQNFVGSNNINLMMPIGQFGT 760
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Query: 216 ESNDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKF 275
E D +EYHT+ V F V P ++ + + K KL TT+ +++ F+ L ++
Sbjct: 921 EIEDIREYHTNNRVHFEVQAIPGRIQ--QWGDIEKKLKLSTTMQTTNIVMFNDKYKLKRY 978
Query: 276 DTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKE 335
+T +I++EFYA+RL+ Y KRKDYL + + L N+ +FI +G L I N +KK
Sbjct: 979 QSTVEIMEEFYALRLKCYQKRKDYLVSKIQRDVDILQNKMKFITLVVNGTLEIRNARKKG 1038
Query: 336 MIAEL 340
++ +L
Sbjct: 1039 VLNKL 1043
>gi|302844478|ref|XP_002953779.1| hypothetical protein VOLCADRAFT_94598 [Volvox carteri f.
nagariensis]
gi|300260887|gb|EFJ45103.1| hypothetical protein VOLCADRAFT_94598 [Volvox carteri f.
nagariensis]
Length = 1126
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 104/180 (57%), Positives = 132/180 (73%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST +EA+EYFS + HR F ++GD D I +AFSKK VD+RK WL+ ++
Sbjct: 598 GLGTSTKEEAQEYFSRLNLHRKEFVWTGDEDGDAIELAFSKKRVDDRKEWLSNFVPGT-- 655
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
YL ++ + I+Y +F+NKELILFS D +RSIP++ DGLKPG RK++F C
Sbjct: 656 ---------YL-DQSAEKISYADFINKELILFSRADLDRSIPNVLDGLKPGQRKIMFACF 705
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN ++++KVAQL+ VAEHSAYHHGEQSL STI+NLAQ+FVGSNNINLL P GQFGT L
Sbjct: 706 KRNLKKDIKVAQLSAYVAEHSAYHHGEQSLASTIVNLAQDFVGSNNINLLHPSGQFGTRL 765
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 2/130 (1%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHK--AEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
DY E+H+D+ V FVV + P KL + A GL FKLQ + S+M F + G++ +
Sbjct: 931 DYHEHHSDSNVHFVVELLPGKLDELLATPGGLEAKFKLQAKVTTSNMMLFQKDGIIKHYQ 990
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
+ I+ EF+ +RL+YY KR+ + + ++ N+ RFI+ G L + NRK+ ++
Sbjct: 991 SPEAIIAEFFELRLDYYEKRRIAMLRFAQMDQMRADNKVRFILAVVHGKLEVRNRKRVDI 1050
Query: 337 IAELIKRKYD 346
+L + +D
Sbjct: 1051 EKDLEAQGFD 1060
>gi|340502362|gb|EGR29059.1| hypothetical protein IMG5_163890 [Ichthyophthirius multifiliis]
Length = 967
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 105/178 (58%), Positives = 125/178 (70%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST KEAKEYFSN+ H+I F Y D D I + FS+K + ERK WL +
Sbjct: 385 GLGTSTDKEAKEYFSNVYDHQIKFLYEDDEDFQRIELGFSRKKIQERKDWLAIY------ 438
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ DY K + + +F++KELI FSN DN RSIPS+ DGLKPG RK+LF C
Sbjct: 439 --NPNLFVDY----NIKQLRFKDFIDKELIHFSNSDNLRSIPSVVDGLKPGQRKILFACF 492
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + E+KVAQL G VAEHSAYHHGEQSL TIIN+AQNFVG+NNI+LL+PIGQFGT
Sbjct: 493 KRNLKNEIKVAQLQGYVAEHSAYHHGEQSLAQTIINMAQNFVGANNISLLEPIGQFGT 550
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +EYHT+ V F V K+ +++ K FKL T I++M FD+ L ++ T
Sbjct: 713 DIREYHTNNRVDFQVQCVKGKMQSWDIE---KKFKLSNTFQITNMVLFDKEHKLKRYGGT 769
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL+ FY +RLE Y KRK YL L + LTN+ RFI +G+L + N K+K +I
Sbjct: 770 EEILEYFYGIRLELYEKRKIYLLSKLQRDMDILTNKMRFINYVVNGELELRNVKRKILIQ 829
Query: 339 EL 340
++
Sbjct: 830 KM 831
>gi|340505648|gb|EGR31961.1| topoisomerase ii beta 180kda, putative [Ichthyophthirius
multifiliis]
Length = 1481
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 123/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST EA+EYF N+E+H I F Y D D+ I +AF+KK D RK WL +
Sbjct: 593 GLGTSTDMEAREYFQNVEKHMISFTYLNDEDEESIDLAFNKKKADARKEWLNAF------ 646
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
ED T K + Y +FV+KELI FS DN RSIP++CDGLK G RK+LF C
Sbjct: 647 ------NEDDNVDHTQKNLRYKDFVHKELINFSISDNARSIPNICDGLKTGQRKILFACF 700
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN ++E+KVAQL+G VAEHSAYHHGEQSL TI +AQNFVGSNNINLL PIGQFG+
Sbjct: 701 KRNLKQEIKVAQLSGYVAEHSAYHHGEQSLAQTITGMAQNFVGSNNINLLMPIGQFGS 758
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
Query: 216 ESNDYKEYHTDTTVKFVVTMSPDKLHKA-EMDGLHKVFKLQTTLAISSMCAFDRYGVLTK 274
E D KEYHT V+F V M L K + GL K FKL ++++ S+M F+ G + K
Sbjct: 918 EIEDIKEYHTGNNVRFEVKMVNGMLDKILKEGGLDKYFKLVSSISTSNMVLFNHEGKIVK 977
Query: 275 FDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKK 334
++ +I+++FY +RL+ Y +RK++L + + L N+ RFI+ + L I+N KKK
Sbjct: 978 YNNIQEIMEDFYKLRLDLYKQRKEFLASKILRDLEILNNKKRFILSVIEEKLDIKNTKKK 1037
Query: 335 EMIAELIKRKY 345
E++ +L+ ++
Sbjct: 1038 EILKQLVALRF 1048
>gi|313217160|emb|CBY38323.1| unnamed protein product [Oikopleura dioica]
Length = 1427
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/179 (56%), Positives = 131/179 (73%), Gaps = 9/179 (5%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +E KEYF +++RHRI F+YSG N D I+MAF++ LVD+RK WLT +
Sbjct: 606 GLGTSGPEEFKEYFQDIQRHRIPFRYSGPNCDERIKMAFARDLVDDRKEWLTEF------ 659
Query: 71 RKEMGIGEDYLYTK-TTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
E G E LY + +TY +F++KEL++FS+ R+IP DGLKPG RKVL+TC
Sbjct: 660 --EAGEDELTLYDREQINYVTYKDFIDKELVIFSHESCLRAIPCSADGLKPGQRKVLWTC 717
Query: 130 LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR D+ +VKVAQL+GSV+E SAYHHGE SLM TII LAQN+VG+NN+NLL+P GQFG+
Sbjct: 718 FKRKDKSKVKVAQLSGSVSEMSAYHHGEVSLMDTIIKLAQNYVGANNVNLLEPFGQFGS 776
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 87/146 (59%), Gaps = 1/146 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAIS-SMCAFDRYGVLTKFDT 277
D+ + VKF+VTMSP ++ +A GLH+ F L ++ + +M F+ G LT ++
Sbjct: 943 DFDNNSSHDRVKFIVTMSPTQMREARKQGLHEYFGLVKSMVFANTMVLFNHAGKLTVYNN 1002
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
T I+K+ Y +R YY KR ++L + A +TN+ARFI+E + + + N K+K +
Sbjct: 1003 TTDIVKDHYELRKTYYLKRHNFLLEKMEARVQFITNRARFILENIEKKITVMNVKRKAIE 1062
Query: 338 AELIKRKYDSDPVKSWKMKQNKENAL 363
A+L +R Y SDPVK+W+ K KE L
Sbjct: 1063 AKLKERGYASDPVKAWEKKVRKEQDL 1088
>gi|313235194|emb|CBY25067.1| unnamed protein product [Oikopleura dioica]
Length = 1427
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/179 (56%), Positives = 131/179 (73%), Gaps = 9/179 (5%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +E KEYF +++RHRI F+YSG N D I+MAF++ LVD+RK WLT +
Sbjct: 606 GLGTSGPEEFKEYFQDIQRHRIPFRYSGPNCDERIKMAFARDLVDDRKEWLTEF------ 659
Query: 71 RKEMGIGEDYLYTK-TTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
E G E LY + +TY +F++KEL++FS+ R+IP DGLKPG RKVL+TC
Sbjct: 660 --EAGEDELTLYDREQINYVTYKDFIDKELVIFSHESCLRAIPCSADGLKPGQRKVLWTC 717
Query: 130 LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR D+ +VKVAQL+GSV+E SAYHHGE SLM TII LAQN+VG+NN+NLL+P GQFG+
Sbjct: 718 FKRKDKSKVKVAQLSGSVSEMSAYHHGEVSLMDTIIKLAQNYVGANNVNLLEPFGQFGS 776
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 87/146 (59%), Gaps = 1/146 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAIS-SMCAFDRYGVLTKFDT 277
D+ + VKF+VTMSP ++ +A GLH+ F L ++ + +M F+ G LT ++
Sbjct: 943 DFDNNSSHDRVKFIVTMSPTQMREARKQGLHEYFGLVKSMVFANTMVLFNHAGKLTVYNN 1002
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
T I+K+ Y +R YY KR ++L + A +TN+ARFI+E + + + N K+K +
Sbjct: 1003 TTDIVKDHYELRKTYYLKRHNFLLEKMEARVQFITNRARFILENIEKKITVMNVKRKAIE 1062
Query: 338 AELIKRKYDSDPVKSWKMKQNKENAL 363
A+L +R Y SDPVK+W+ K KE L
Sbjct: 1063 AKLKERGYASDPVKAWEKKVRKEQDL 1088
>gi|429327596|gb|AFZ79356.1| DNA topoisomerase II, putative [Babesia equi]
Length = 1170
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/188 (56%), Positives = 129/188 (68%), Gaps = 12/188 (6%)
Query: 1 MNTIHDVMIAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTW 60
++T H GLGTST KE KEYFSN+ H I F Y NDD I +AFSKK VD+RK W
Sbjct: 583 LSTWHIKYYKGLGTSTDKEFKEYFSNLPEHLIDFTYIDQNDDDSIDLAFSKKRVDDRKVW 642
Query: 61 LTTWMEECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKP 120
L ++ G G D+ + K + Y++FVNKELI FS D ERSIPS+ DG KP
Sbjct: 643 LQNFVH--------GDGIDH----SIKHMRYSDFVNKELIQFSIYDTERSIPSMVDGWKP 690
Query: 121 GSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLL 180
G RKVLF C KRN + E KVAQL+G +AEHSAYHHGE SL TI+N+AQ+F GSNNIN+L
Sbjct: 691 GQRKVLFGCFKRNLKNECKVAQLSGYIAEHSAYHHGETSLQQTIVNMAQDFAGSNNINVL 750
Query: 181 QPIGQFGT 188
+P GQFG+
Sbjct: 751 EPCGQFGS 758
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 71/128 (55%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTN 279
Y + T ++ F V ++PD + +G+ K+ KL+TT++ ++M FD L ++DT
Sbjct: 923 YLDNSTHESIHFTVNLNPDCYEEILKEGIDKILKLKTTISTTNMTLFDANKRLRRYDTVL 982
Query: 280 QILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAE 339
IL++F +RL +Y KR+D+L L E L+NQ RFI + + + + ++++E
Sbjct: 983 DILRDFADIRLVFYNKRRDHLIKQLQIEQQILSNQVRFIDLVITNKIVLFKKSRNQLVSE 1042
Query: 340 LIKRKYDS 347
L +D
Sbjct: 1043 LKALNFDP 1050
>gi|348667921|gb|EGZ07746.1| hypothetical protein PHYSODRAFT_565596 [Phytophthora sojae]
Length = 1289
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/181 (59%), Positives = 125/181 (69%), Gaps = 12/181 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+ E KEYFS++ H+I F Y G+ D I MAFSKK V++RK WL R
Sbjct: 713 GLGTSTAAETKEYFSDLRTHQIGFTYGGEGDADVIDMAFSKKRVEDRKEWL--------R 764
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G DY + YT+FVNKELILFS DN RSIPS+ DG KP RKVLF C
Sbjct: 765 GYEPGTYVDY----DVDEMGYTDFVNKELILFSMADNIRSIPSIVDGFKPSQRKVLFCCF 820
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R E+KVAQLAG V+EHSAYHHGE SL I+N+AQ+FVGSNN++LL PIGQFGT L
Sbjct: 821 KRNLRSELKVAQLAGYVSEHSAYHHGEASLQGCIVNMAQDFVGSNNVHLLSPIGQFGTRL 880
Query: 191 F 191
Sbjct: 881 M 881
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 81/130 (62%), Gaps = 2/130 (1%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAE--MDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
D+KE HTD V F +T+ P L G+ K FKL+++L+ S+M FD G + K++
Sbjct: 1042 DFKENHTDVKVLFTITLEPKTLSDIAKTQGGIVKKFKLESSLSTSNMHLFDAAGHIKKYE 1101
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
+I++EFY +RL+YY +RK+ + L + L+N+ARF++ +G L + NRKK+E+
Sbjct: 1102 NPKEIMEEFYGIRLDYYGRRKEAMLQKLRDQIKLLSNKARFVLSVVEGKLVVNNRKKQEL 1161
Query: 337 IAELIKRKYD 346
+ ELI YD
Sbjct: 1162 LEELIAEGYD 1171
>gi|325187394|emb|CCA21933.1| predicted protein putative [Albugo laibachii Nc14]
gi|325190307|emb|CCA24783.1| topoisomerase putative [Albugo laibachii Nc14]
Length = 1499
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/181 (58%), Positives = 124/181 (68%), Gaps = 12/181 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST++EAKEYFS++ H+I F Y G+ D I MAFSKK V+ERK WL +
Sbjct: 652 GLGTSTTEEAKEYFSDLATHQIDFSYKGEEDGDSIDMAFSKKRVEERKNWLRGYTP---- 707
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G DY + Y+EFVNKELILFS DN RSIP L DG KP RKVL+ C
Sbjct: 708 ----GTHVDY----NIADMPYSEFVNKELILFSRADNMRSIPCLVDGFKPSQRKVLYCCF 759
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R E+KVAQLAG V+EHS+YHHGE SL TIIN+AQ+F+GSNN NLL P GQFGT +
Sbjct: 760 KRNLRVEIKVAQLAGYVSEHSSYHHGEASLHGTIINMAQDFIGSNNSNLLSPNGQFGTRI 819
Query: 191 F 191
Sbjct: 820 L 820
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 83/130 (63%), Gaps = 2/130 (1%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMD--GLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
D+KE HTD+ V F ++M+P+K+ + + G+ + FKL+++++ ++M FD G + K+D
Sbjct: 982 DFKENHTDSKVLFTISMTPEKMQEIVLSPGGIMRKFKLESSISAANMHLFDADGRIQKYD 1041
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
+ ++I+ FY +RL YY KRK + L + L N+ +FI+ GDL + NRKK E+
Sbjct: 1042 SPHEIISAFYDIRLAYYGKRKAAMLQKLTDQIEMLANKVKFILAVIQGDLIVSNRKKVEL 1101
Query: 337 IAELIKRKYD 346
+ EL++ YD
Sbjct: 1102 LHELVEMGYD 1111
>gi|159484508|ref|XP_001700298.1| DNA topoisomerase II [Chlamydomonas reinhardtii]
gi|158272465|gb|EDO98265.1| DNA topoisomerase II [Chlamydomonas reinhardtii]
Length = 1167
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 129/180 (71%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST +EA+EYFS ++ HR F + GD D I +AFSKK VD+RK WL+ ++
Sbjct: 613 GLGTSTKEEAQEYFSRLDLHRKEFVWEGDEDGDSIELAFSKKRVDDRKEWLSNFVPGT-- 670
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
++ I+Y++F+N+ELILFS D +RSIPS+ DGLKPG RK+L+ C
Sbjct: 671 ----------FLDQSADRISYSDFINRELILFSRADLDRSIPSMLDGLKPGQRKILYACF 720
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN ++++KVAQL+ VAEHSAYHHGE SL STI+NLAQ+FVGSNN+NLL P GQFGT L
Sbjct: 721 KRNLKKDIKVAQLSAYVAEHSAYHHGEGSLASTIVNLAQDFVGSNNVNLLHPSGQFGTRL 780
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHK--AEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
DY E+H+D+ V FVV + P K+ + A GL FKL T +A S+M FD G++ +
Sbjct: 950 DYSEHHSDSNVHFVVELLPGKMEELLASPGGLDGKFKLTTKIATSNMMLFDHSGMIKHYS 1009
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
+ I+ EFY +RL+YY KR+ + V + + N+ RFI+ +G L + RK+ ++
Sbjct: 1010 SPEMIVAEFYELRLDYYEKRRIAMLKVASLDQKRADNRIRFILAVVEGRLEVRGRKRADL 1069
Query: 337 IAELIKRKYD 346
+L + +D
Sbjct: 1070 ERDLEAQGFD 1079
>gi|384250310|gb|EIE23790.1| DNA topoisomerase II [Coccomyxa subellipsoidea C-169]
Length = 1189
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 130/180 (72%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS KEA+EYF+ +++HR F Y+G+ DD I +AFSKK ++ERK WL +
Sbjct: 601 GLGTSDKKEAQEYFAGIDQHRKSFVYTGEEDDQAIELAFSKKKIEERKQWLAGF------ 654
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G YL ++ I+Y++FVNKELILFS D ERSIP++ DGLKPG RK+LF C
Sbjct: 655 --EPGT---YL-DQSVDEISYSDFVNKELILFSRADLERSIPNMVDGLKPGQRKILFCCF 708
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN RR+VKVAQL+G V+ +AYHHGE SL STII LA NF+GSNN+NLL P GQFGT L
Sbjct: 709 KRNIRRDVKVAQLSGFVSADTAYHHGEASLQSTIIGLAHNFIGSNNVNLLVPQGQFGTRL 768
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 80/134 (59%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DY+E+H+D V F + + P ++ GLH FKL ++ +M FD+ GV+ +++T
Sbjct: 933 SDYREHHSDADVHFTLQLLPGQMDACLAAGLHAKFKLTNKMSCGNMVLFDQRGVIKRYET 992
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILK+FY +R++YYAKR+ L + L N+ RFI+ G+L + NRKK +++
Sbjct: 993 AEDILKDFYELRIDYYAKRRLCLIREAEFQMRILANETRFILAVVSGELVVSNRKKADIV 1052
Query: 338 AELIKRKYDSDPVK 351
A+L + YD P K
Sbjct: 1053 ADLERAGYDKMPPK 1066
>gi|156088413|ref|XP_001611613.1| DNA topoisomerase II [Babesia bovis T2Bo]
gi|154798867|gb|EDO08045.1| DNA topoisomerase II, putative [Babesia bovis]
Length = 1437
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 126/178 (70%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST KE KEYF N+++H I F Y + DD I +AF+KK VD+RK W+ ++
Sbjct: 594 GLGTSTDKEFKEYFVNIQQHLIDFIYEDNADDDSIDLAFNKKRVDDRKLWMQSY------ 647
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D+ + K + YT+F+NKELI FS D ERSIPS+ DG KPG RKVLF CL
Sbjct: 648 --EHGTTVDH----SIKKLRYTDFINKELIQFSIYDTERSIPSVVDGWKPGQRKVLFGCL 701
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN E KVAQL G VAEHSAYHHGE SL TIIN+AQNFVGSNNIN+L+P GQFG+
Sbjct: 702 KRNLVGECKVAQLTGYVAEHSAYHHGEASLQQTIINMAQNFVGSNNINVLEPCGQFGS 759
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 72/124 (58%)
Query: 225 TDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKE 284
T +V F + ++P+ + + +G+ KVFKL+T++A ++M FD L ++ +I+++
Sbjct: 929 THESVHFTLNVNPECIEEVINEGVDKVFKLRTSIATTNMTLFDANKKLKRYSNELEIIRD 988
Query: 285 FYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRK 344
F AVRL Y KRK YL L +++NQ RFI + +L + + K ++AEL
Sbjct: 989 FAAVRLATYEKRKTYLINNLKLLLRRISNQVRFIHMVVNEELVLFKKAKATLVAELRDLG 1048
Query: 345 YDSD 348
+DS+
Sbjct: 1049 FDSN 1052
>gi|403222061|dbj|BAM40193.1| DNA topoisomerase 2 [Theileria orientalis strain Shintoku]
Length = 2103
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 124/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ KE KEYFSN+ RH I F Y + DD I MAFSKK +++RK W+ +
Sbjct: 595 GLGTSSDKEFKEYFSNLNRHLIEFNYVDNKDDDSIDMAFSKKRIEDRKNWMQNYT----- 649
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+G D+ + K + Y++F+NKELI FS D ERSIPS+ DG KPG RKVLF C
Sbjct: 650 ---LGNTVDH----SIKKLRYSDFINKELIQFSIYDTERSIPSVIDGFKPGQRKVLFGCF 702
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + E KVAQL G +AEHSAYHHGE SL TI+N+AQ+FVGSNN+NLL P GQFG+
Sbjct: 703 KRNLKNECKVAQLTGYIAEHSAYHHGENSLQQTIVNMAQDFVGSNNLNLLLPCGQFGS 760
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 78/128 (60%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY ++ ++ + V ++ + + +G+ KVFKL+TT++ S+M FD + ++++
Sbjct: 928 DYSDFSSNEVIDIRVNINVNMAAEIMKEGVEKVFKLKTTISTSNMTLFDSSKRIKRYESE 987
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ILKEF R++YY KR++YL L + +L+NQ RFI + +L + + K++++
Sbjct: 988 LEILKEFINTRVKYYNKRREYLIKQLQVQLQQLSNQVRFINMIINNELVLFRKSKQQIVN 1047
Query: 339 ELIKRKYD 346
EL + ++D
Sbjct: 1048 ELKRLQFD 1055
>gi|392577303|gb|EIW70432.1| hypothetical protein TREMEDRAFT_43154 [Tremella mesenterica DSM
1558]
Length = 1344
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/178 (60%), Positives = 127/178 (71%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS +AK+YFS +ERHR+ F+ + D A I MAF+KK D+RK WL R
Sbjct: 609 GLGTSTSADAKKYFSALERHRLAFETMKNEDRALIDMAFNKKKADDRKEWL--------R 660
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ + ++FVNKELILFS DN RSIPS+ DGLKPG RKVLF C
Sbjct: 661 QFKPGTFLDH----DVHTVPISDFVNKELILFSMADNIRSIPSVADGLKPGQRKVLFGCF 716
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN +E+KVAQLAG V+E +AYHHGEQSL STI+ LAQNFVGSNNINLL P GQFGT
Sbjct: 717 KRNLTKEIKVAQLAGYVSEKTAYHHGEQSLTSTIVGLAQNFVGSNNINLLAPNGQFGT 774
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 78/122 (63%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+E+HTDTTV F + ++ + + AE +G K FK+ TT++ S+M FD G + K+ +
Sbjct: 937 DYEEHHTDTTVHFRLHLADNHMRAAEEEGFEKRFKMSTTISTSNMVCFDMNGKIKKYSSA 996
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL +F+ RLE+YA RK +L L + KL+NQARF+ +L + N+KK ++A
Sbjct: 997 EEILSDFFHKRLEFYALRKQHLADELNRQFEKLSNQARFVQMIISKELSVSNKKKAVLVA 1056
Query: 339 EL 340
EL
Sbjct: 1057 EL 1058
>gi|428169756|gb|EKX38687.1| hypothetical protein GUITHDRAFT_158481 [Guillardia theta CCMP2712]
Length = 1343
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 122/180 (67%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+S+EAKEYFSN+ H++ F + G D I M FSKK D+RK WL + E
Sbjct: 613 GLGTSSSQEAKEYFSNLPLHQMDFAWEGAEDGEIIDMVFSKKRADDRKQWLLRYEE---- 668
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
D +TY++F+NKELI FS MDN RSIPSL DG KPG RK+L+ C
Sbjct: 669 --------DLFVDHNGSEVTYSDFINKELIHFSMMDNMRSIPSLVDGWKPGQRKILYACF 720
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR + E+KVAQLAG VAEHSAYHHGEQSL I+ +AQNFVGSNN+N+L P GQFGT L
Sbjct: 721 KRKLKAEIKVAQLAGYVAEHSAYHHGEQSLAMAIVGMAQNFVGSNNVNVLVPSGQFGTRL 780
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 86/126 (68%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTN 279
Y+EYHTDTTV F V+M+ ++ +AE G+ K F+L +LAIS+M F+ G + ++D+
Sbjct: 947 YREYHTDTTVYFEVSMTEKRMEEAEEVGIAKKFQLSRSLAISNMHLFNADGQIQRYDSPE 1006
Query: 280 QILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAE 339
QI++EFY VR+E+Y +RK+ LEG LG + L N+ RFI E G L++ NRKK E++ +
Sbjct: 1007 QIMREFYGVRMEHYRQRKEQLEGELGKQLKVLDNKCRFIKEVIAGTLKVNNRKKTEIVQD 1066
Query: 340 LIKRKY 345
L R Y
Sbjct: 1067 LSARGY 1072
>gi|440796916|gb|ELR18016.1| DNA gyrase/topoisomerase IV, A subunit [Acanthamoeba castellanii
str. Neff]
Length = 1137
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/187 (54%), Positives = 135/187 (72%), Gaps = 7/187 (3%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGT+T++E KEYF + +HRI F++ G+ D I MAFSK V++RK WL + EE ++
Sbjct: 706 GLGTNTTEEGKEYFKALGKHRIGFEWQGEQDGRQIDMAFSKDQVEQRKQWLMAFYEEQKQ 765
Query: 71 R-----KEMGIGEDYLYTKTTKA--ITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSR 123
R ++ + + L+ K +A I+Y++F+NKEL+LFSN DN RSIPS+ DGLKPG R
Sbjct: 766 RVADHNYDVPLYSEDLFKKDEEARMISYSDFINKELVLFSNADNIRSIPSVIDGLKPGQR 825
Query: 124 KVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPI 183
KVL+ C KR E+KVAQLAG V+E +AYHHGE SL STI+++AQNF GSNN+ LL P
Sbjct: 826 KVLYACFKRKLHSEMKVAQLAGYVSEQTAYHHGEASLHSTIVHMAQNFPGSNNVPLLYPA 885
Query: 184 GQFGTFL 190
GQFGT L
Sbjct: 886 GQFGTRL 892
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 47/70 (67%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTN 279
+KE+HT+ +V F V M+ +++ AE GL + FKL + +++++M FD+ G + +F+
Sbjct: 1068 FKEHHTENSVDFHVYMTKEQMELAESVGLVEHFKLYSQISLNNMHLFDKDGKIRRFECPL 1127
Query: 280 QILKEFYAVR 289
+I+ EF+ +R
Sbjct: 1128 EIIDEFFPLR 1137
>gi|403158494|ref|XP_003307791.2| DNA topoisomerase II [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375163841|gb|EFP74785.2| DNA topoisomerase II [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1613
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +K+AK+YFS M HRI F + +ND I MAF+KK D+RK WL R
Sbjct: 710 GLGTSDAKDAKKYFSRMSSHRIKFAPTQENDRHLIDMAFNKKKADDRKEWL--------R 761
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D + ITYTEF+NKELILFS DN RSIPS+ DG KPG RKVLF C
Sbjct: 762 GFEPGTHLD----QNVSQITYTEFINKELILFSMADNIRSIPSMVDGFKPGQRKVLFACF 817
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR + E+KVAQL G +EHSAYHHGE SL TI+ LAQNFVGSNNIN+L P GQFGT
Sbjct: 818 KRKLKAEIKVAQLGGYCSEHSAYHHGEASLTQTIVGLAQNFVGSNNINVLSPNGQFGT 875
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 87/134 (64%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHT+TTV F+++++ + +G+ KVFKL L+I++M FD G + K+ T
Sbjct: 1038 DYREYHTETTVHFIISLTERGKDAIKKEGIEKVFKLSANLSITNMVCFDPSGKIKKYSTP 1097
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
QIL +FY VRL YY KRK+YL L +L+NQARF++ + L + NRKK E++A
Sbjct: 1098 EQILDDFYDVRLAYYQKRKEYLVNDLTLMYERLSNQARFVLMIIEKKLVVSNRKKAEIVA 1157
Query: 339 ELIKRKYDSDPVKS 352
EL K ++ PVK+
Sbjct: 1158 ELRKLEFRPFPVKA 1171
>gi|26984133|gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum]
gi|26984168|gb|AAN85208.1| DNA topoisomerase II [Nicotiana tabacum]
Length = 1482
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 128/178 (71%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKE KEYF ++++HR F ++ + D I +AFSKK ++ RK WL R
Sbjct: 606 GLGTSTSKEGKEYFQDLQKHRKDFIWADNQDGESIELAFSKKKIEARKNWL--------R 657
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D + K I+YTEFVNKELILFS D +RSIPS+ DGLKPG RK+LF
Sbjct: 658 QFEPGTHLD----QKEKYISYTEFVNKELILFSMADLQRSIPSMLDGLKPGQRKILFCAF 713
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN +E KV+Q +G V+EHSAYHHGEQSL STII +AQ++VGSNN+NLLQP GQFGT
Sbjct: 714 KRNFVKEAKVSQFSGYVSEHSAYHHGEQSLSSTIIGMAQDYVGSNNVNLLQPNGQFGT 771
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 80/133 (60%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
+ + Y + +V F V MS + L A+ +GL K FKL TT++ S+M FD G + K+D
Sbjct: 939 EVRAYGDENSVCFEVIMSEENLILAQQEGLLKKFKLATTISTSNMHLFDSNGKIKKYDNP 998
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+EFY VRLEYY KRK L +L E L++ N+ +FI+ ++ + NRK+ +++
Sbjct: 999 EDILEEFYHVRLEYYEKRKKALLEILELELLRIENKVKFILGVVKVEIIVNNRKRADLLL 1058
Query: 339 ELIKRKYDSDPVK 351
EL ++ + P K
Sbjct: 1059 ELKEKGFTPFPKK 1071
>gi|291000712|ref|XP_002682923.1| DNA topoisomerase II [Naegleria gruberi]
gi|284096551|gb|EFC50179.1| DNA topoisomerase II [Naegleria gruberi]
Length = 1457
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 106/180 (58%), Positives = 125/180 (69%), Gaps = 13/180 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+ EAKEYFSNM H+ FKY D D I FSK DERK WL E
Sbjct: 629 GLGTSTAPEAKEYFSNMSLHQKRFKYDTDCD-KKITSVFSKAATDERKEWLNNHQE---- 683
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G D+ + K I+YT+F++KELILFS D +RSIPS+ DGLKPG RK+LF+C
Sbjct: 684 ----GTYIDH----SKKEISYTDFIDKELILFSKADCKRSIPSIVDGLKPGQRKILFSCF 735
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN ++E+KVAQLAG V+E SAYHHGE SL T++N+AQNFVGSNNINLL P G FGT L
Sbjct: 736 KRNLKKEIKVAQLAGYVSEQSAYHHGEDSLNGTVVNMAQNFVGSNNINLLYPGGMFGTRL 795
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 82/132 (62%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+D++E HTD TV F V M+ ++ AE GL+ FKL + S+M F G + +++T
Sbjct: 950 DDFRENHTDVTVSFTVKMTDKQMKDAEDAGLYDYFKLFKKFSTSNMVLFSEEGGIKEYET 1009
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEFY +RL++Y KRK+Y+ + E L+N+ RFI+E + ++++ RKK +++
Sbjct: 1010 VLDILKEFYPIRLKFYGKRKEYMLEKMKKELEILSNKVRFIMEVINETIQVKKRKKADLL 1069
Query: 338 AELIKRKYDSDP 349
EL +KY S P
Sbjct: 1070 KELKTKKYSSFP 1081
>gi|401825934|ref|XP_003887061.1| DNA topoisomerase II [Encephalitozoon hellem ATCC 50504]
gi|392998219|gb|AFM98080.1| DNA topoisomerase II [Encephalitozoon hellem ATCC 50504]
Length = 1144
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 108/180 (60%), Positives = 127/180 (70%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS +AK+YFSN+ H F D D I +AF+KK D RKTWL ++
Sbjct: 577 GLGTSTSADAKQYFSNLPIHVKNFTPLVDEDKELIDLAFNKKKADARKTWLLSF------ 630
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D ++ I+ ++FVNKELILFS DN RSIPSL DGLKPG RKV+F+C
Sbjct: 631 --EPGTFLD----QSLPQISISDFVNKELILFSMADNIRSIPSLVDGLKPGQRKVMFSCF 684
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R E+KVAQL G V+E SAYHHGEQSL STI+NLAQ+FVGSNNINLL PIGQFG+ L
Sbjct: 685 KRNLRSEIKVAQLVGYVSEQSAYHHGEQSLCSTIVNLAQDFVGSNNINLLLPIGQFGSRL 744
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 73/127 (57%), Gaps = 10/127 (7%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D+KEYHT+ TV F V ++ H + + KL TT+ I++M FD + K+ T
Sbjct: 898 DFKEYHTEKTVNFTVKLAK---HVSNL-------KLNTTITINNMVCFDEKLGIKKYSTP 947
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILKEFY VRL YY+ RK+ + V+ E ++L N+ RFI E G L I R++ E++
Sbjct: 948 KDILKEFYDVRLRYYSIRKENMLKVMKEELVRLENKVRFIKEVSTGGLVISRRRRAEIVF 1007
Query: 339 ELIKRKY 345
+L R Y
Sbjct: 1008 DLEARGY 1014
>gi|331251443|ref|XP_003338318.1| DNA topoisomerase 2 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1164
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +K+AK+YFS M HRI F + +ND I MAF+KK D+RK WL R
Sbjct: 682 GLGTSDAKDAKKYFSRMSSHRIKFAPTQENDRHLIDMAFNKKKADDRKEWL--------R 733
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D + ITYTEF+NKELILFS DN RSIPS+ DG KPG RKVLF C
Sbjct: 734 GFEPGTHLD----QNVSQITYTEFINKELILFSMADNIRSIPSMVDGFKPGQRKVLFACF 789
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR + E+KVAQL G +EHSAYHHGE SL TI+ LAQNFVGSNNIN+L P GQFGT
Sbjct: 790 KRKLKAEIKVAQLGGYCSEHSAYHHGEASLTQTIVGLAQNFVGSNNINVLSPNGQFGT 847
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 87/134 (64%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHT+TTV F+++++ + +G+ KVFKL L+I++M FD G + K+ T
Sbjct: 1010 DYREYHTETTVHFIISLTERGKDAIKKEGIEKVFKLSANLSITNMVCFDPSGKIKKYSTP 1069
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
QIL +FY VRL YY KRK+YL L +L+NQARF++ + L + NRKK E++A
Sbjct: 1070 EQILDDFYDVRLAYYQKRKEYLVNDLTLMYERLSNQARFVLMIIEKKLVVSNRKKAEIVA 1129
Query: 339 ELIKRKYDSDPVKS 352
EL K ++ PVK+
Sbjct: 1130 ELRKLEFGPFPVKA 1143
>gi|396081182|gb|AFN82800.1| DNA topoisomerase II [Encephalitozoon romaleae SJ-2008]
Length = 1144
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 108/180 (60%), Positives = 127/180 (70%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS +AK+YFSN+ H F D D I +AF+KK D RKTWL ++
Sbjct: 577 GLGTSTSADAKQYFSNLPIHVKHFTPLVDEDKELIDLAFNKKKADARKTWLLSF------ 630
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D ++ I+ ++FVNKELILFS DN RSIPSL DGLKPG RKV+F+C
Sbjct: 631 --EPGTFLD----QSLSHISISDFVNKELILFSMADNIRSIPSLVDGLKPGQRKVMFSCF 684
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R E+KVAQL G V+E SAYHHGEQSL STI+NLAQ+FVGSNNINLL PIGQFG+ L
Sbjct: 685 KRNLRSEIKVAQLVGYVSEQSAYHHGEQSLCSTIVNLAQDFVGSNNINLLLPIGQFGSRL 744
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 72/127 (56%), Gaps = 10/127 (7%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D+KEYHT+ TV F V ++ H + + KL T+ I++M FD + K+ T
Sbjct: 898 DFKEYHTEKTVNFTVKLAK---HVSNL-------KLSNTITINNMVCFDENLGIKKYSTP 947
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++FY VRL YY+ RKD + V+ E +KL N+ +FI E G L I R+K E+I
Sbjct: 948 KDILRDFYDVRLRYYSMRKDNMMKVMKDELVKLENKVKFIKEVSTGGLIINRRRKAEIIF 1007
Query: 339 ELIKRKY 345
+L R Y
Sbjct: 1008 DLESRGY 1014
>gi|70947313|ref|XP_743285.1| DNA topoisomerase II [Plasmodium chabaudi chabaudi]
gi|56522707|emb|CAH74370.1| DNA topoisomerase II, putative [Plasmodium chabaudi chabaudi]
Length = 937
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 126/178 (70%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST KE K+YFS+++ H+I+F ++GD D I MAFSKK +++RK WL ++
Sbjct: 143 GLGTSTDKEFKQYFSDIQSHKIVFLWTGDRDGDSIDMAFSKKRIEDRKLWLQNFI----- 197
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+G D+ K ++Y +FVNKELI +S D ERSIP++ DG KPG RKVL+ C
Sbjct: 198 ---LGSYVDH----KEKDLSYYDFVNKELIYYSRYDTERSIPNIMDGWKPGQRKVLYGCF 250
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN R E KVAQL G +AEHSAYHHGE SL TIIN+AQ FVGSNNIN L+P GQFG+
Sbjct: 251 KRNLRNECKVAQLVGYIAEHSAYHHGESSLQQTIINMAQTFVGSNNINFLEPCGQFGS 308
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 75/129 (58%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY + + V F + M P KL KAE +GL KVFKL++TL ++M FD L ++ +
Sbjct: 469 DYIDNSSHEDVCFTIKMDPVKLKKAEEEGLEKVFKLKSTLTTTNMTLFDSNLKLQRYASE 528
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILK+F RL Y +RK YL L E ++N+ +FI+ +G+L + +KKK ++
Sbjct: 529 LDILKDFCFHRLNAYNERKSYLISKLEKEKRIISNKTKFILAIINGELVVNKKKKKILVE 588
Query: 339 ELIKRKYDS 347
EL ++ YD
Sbjct: 589 ELYRKGYDP 597
>gi|303276424|ref|XP_003057506.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461858|gb|EEH59151.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1473
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 107/180 (59%), Positives = 124/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF+ + HR F +S DN I MAFSKK VD+RK WLT +
Sbjct: 638 GLGTSTSKEAKEYFAALAHHRKTFTWSDDNSGDLIDMAFSKKRVDDRKQWLTAY------ 691
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D T + Y +FVNKELILFS D RSIPS+ DG KP RKVLF+C
Sbjct: 692 --EPGTFLDM----TGDDVGYDDFVNKELILFSRADLMRSIPSVVDGFKPSQRKVLFSCF 745
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR + ++KVAQL+G V+EHSAYHHGE SL STI+ LAQ+FVGSNN+NLL P GQFGT L
Sbjct: 746 KRKLKSDIKVAQLSGYVSEHSAYHHGEASLASTIVGLAQDFVGSNNVNLLVPSGQFGTRL 805
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 79/128 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE+HTDTTV FVVTM+P+K+ +A+ +G+ K FKL + ++ S+M FD G + K+
Sbjct: 970 DYKEHHTDTTVHFVVTMTPEKMAQAQKEGIEKKFKLSSKVSTSNMHCFDANGGIQKYSNP 1029
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I+K F +RL+ Y KR+ L +E +L N+ RFI+ D L I +KK ++
Sbjct: 1030 EEIMKAFVPLRLKAYEKRRTMLIRQAESELKRLANKTRFILAVVDEKLSIGRKKKSALVE 1089
Query: 339 ELIKRKYD 346
EL +D
Sbjct: 1090 ELESLGFD 1097
>gi|71030782|ref|XP_765033.1| DNA topoisomerase II [Theileria parva strain Muguga]
gi|68351989|gb|EAN32750.1| DNA topoisomerase II, putative [Theileria parva]
Length = 1378
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 123/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ E KEYF N+ RH + FKY DD I +AFSKK +D+RK W+ ++
Sbjct: 595 GLGTSSDNEFKEYFGNLNRHIVEFKYVDTVDDDSIDLAFSKKRIDDRKRWMQNYV----- 649
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+G D+ + K + Y++F+NKELI FS D ERSIPS+ DG KPG RKVLF C
Sbjct: 650 ---LGTTVDH----SIKKLRYSDFINKELIQFSIYDTERSIPSVIDGFKPGQRKVLFGCF 702
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + E KVAQL G +AEHSAYHHGE SL TI+N+AQ+FVGSNNINLL P GQFG+
Sbjct: 703 KRNLKNECKVAQLTGYIAEHSAYHHGENSLQQTIVNMAQDFVGSNNINLLLPCGQFGS 760
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 77/132 (58%), Gaps = 8/132 (6%)
Query: 219 DYKEYHTDTTVKFVVTMS---PDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKF 275
DY +Y ++ +K + ++ PD D + KVFKL+TT+ S+M FD + K+
Sbjct: 924 DYGDYSSNEDIKIKIKLNDSGPDI-----TDDIEKVFKLKTTIPTSNMILFDCNKRIKKY 978
Query: 276 DTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKE 335
+ ILK+F R++YY+KR++Y+ L + +L+NQ RFI + +L I + KK+
Sbjct: 979 NGAIDILKDFITTRVKYYSKRREYMIKQLQLQLQQLSNQIRFINMIINNELVIFRKSKKQ 1038
Query: 336 MIAELIKRKYDS 347
+++EL + +++
Sbjct: 1039 IVSELKRLNFNT 1050
>gi|403180027|ref|XP_003888500.1| DNA topoisomerase II [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375165611|gb|EHS62950.1| DNA topoisomerase II [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 506
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +K+AK+YFS M HRI F + +ND I MAF+KK D+RK WL R
Sbjct: 24 GLGTSDAKDAKKYFSRMSSHRIKFAPTQENDRHLIDMAFNKKKADDRKEWL--------R 75
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D + ITYTEF+NKELILFS DN RSIPS+ DG KPG RKVLF C
Sbjct: 76 GFEPGTHLD----QNVSQITYTEFINKELILFSMADNIRSIPSMVDGFKPGQRKVLFACF 131
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR + E+KVAQL G +EHSAYHHGE SL TI+ LAQNFVGSNNIN+L P GQFGT
Sbjct: 132 KRKLKAEIKVAQLGGYCSEHSAYHHGEASLTQTIVGLAQNFVGSNNINVLSPNGQFGT 189
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 87/134 (64%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHT+TTV F+++++ + +G+ KVFKL L+I++M FD G + K+ T
Sbjct: 352 DYREYHTETTVHFIISLTERGKDAIKKEGIEKVFKLSANLSITNMVCFDPSGKIKKYSTP 411
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
QIL +FY VRL YY KRK+YL L +L+NQARF++ + L + NRKK E++A
Sbjct: 412 EQILDDFYDVRLAYYQKRKEYLVNDLTLMYERLSNQARFVLMIIEKKLVVSNRKKAEIVA 471
Query: 339 ELIKRKYDSDPVKS 352
EL K ++ PVK+
Sbjct: 472 ELRKLEFGPFPVKA 485
>gi|403345854|gb|EJY72307.1| DNA topoisomerase 2 [Oxytricha trifallax]
Length = 1410
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 103/179 (57%), Positives = 128/179 (71%), Gaps = 14/179 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++KEAKEYFS ++ H+I F+Y + D+ I +AF+KKL D+RK WLTT+ +
Sbjct: 601 GLGTSSAKEAKEYFSAIDNHQIEFEYVDNEDEEVIDLAFNKKLADKRKDWLTTYRTD--- 657
Query: 71 RKEMGIGEDYLYTKTTKA-ITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
LY ++ + Y +FVNKELILFS D RSIP+LCDGLKPG RK+LF
Sbjct: 658 ----------LYVDHSQTHLRYKDFVNKELILFSVADCLRSIPNLCDGLKPGQRKILFCV 707
Query: 130 LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+ + E+KVAQL G V E+SAYHHGEQSL TII +AQNFVGSNNINLL P+GQFGT
Sbjct: 708 FKKKLKDEIKVAQLVGYVGENSAYHHGEQSLCQTIITMAQNFVGSNNINLLLPLGQFGT 766
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEM-DGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
++ +E HT+ V F+V +P KL E +G+ K FKL TTL+ ++ FD G + K+
Sbjct: 929 DEIRELHTENRVHFIVKCNPGKLQDIEAKEGIEKKFKLSTTLSSANYVLFDYQGKIRKYA 988
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
I++EF+ +R Y +RKDY+ L E + N+ RFI+ + D++I KKK +
Sbjct: 989 GEEYIVREFFGLREALYHRRKDYILARLRKEFETIENKMRFILAIINEDIKINRVKKKII 1048
Query: 337 IAEL 340
+A+L
Sbjct: 1049 VAKL 1052
>gi|389585649|dbj|GAB68379.1| DNA topoisomerase II [Plasmodium cynomolgi strain B]
Length = 1506
Score = 203 bits (517), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 127/178 (71%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST KE KEYFS+++ H+I+F ++GD D I MAFSKK +++RK WL ++
Sbjct: 666 GLGTSTDKEFKEYFSDIKNHKIMFLWTGDRDGDSIDMAFSKKRIEDRKLWLQNFI----- 720
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
IG Y+ K K ++Y +FVNKELI +S D ERSIP++ DG KPG RKVL+ C
Sbjct: 721 -----IGS-YVDHKE-KDLSYYDFVNKELIYYSRYDTERSIPNIMDGWKPGQRKVLYGCF 773
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + E KVAQL G +AEHSAYHHGE SL TIIN+AQ FVGSNNIN L+P GQFG+
Sbjct: 774 KRNLKNECKVAQLVGYIAEHSAYHHGESSLQQTIINMAQTFVGSNNINFLEPCGQFGS 831
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 76/129 (58%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY + + + F + M P KL KAE +GL KVFKL++TL ++M FD L ++ T
Sbjct: 992 DYIDNSSHEDICFTIKMDPAKLKKAEEEGLEKVFKLKSTLTTTNMTLFDPNLKLQRYSTE 1051
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILKEF RL+ Y RK+YL L E ++N+++FI+ + +L + +KKK ++
Sbjct: 1052 LDILKEFCFHRLKAYENRKNYLISKLEKEKKIISNKSKFILAIVNDELIVSKKKKKVLVE 1111
Query: 339 ELIKRKYDS 347
EL ++ YD
Sbjct: 1112 ELYRKGYDP 1120
>gi|84995060|ref|XP_952252.1| DNA topoisomerase II [Theileria annulata strain Ankara]
gi|65302413|emb|CAI74520.1| DNA topoisomerase II, putative [Theileria annulata]
Length = 1369
Score = 203 bits (517), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 123/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ E KEYF N+ RH + FKY DD I +AFSKK +D+RK W+ ++
Sbjct: 595 GLGTSSDNEFKEYFGNLNRHIVEFKYVDTVDDDSIDLAFSKKRIDDRKKWIQNYV----- 649
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+G D+ + K + Y++F+NKELI FS D ERSIPS+ DG KPG RKVLF C
Sbjct: 650 ---LGTTVDH----SIKKLRYSDFINKELIQFSIYDTERSIPSVIDGFKPGQRKVLFGCF 702
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + E KVAQL G +AEHSAYHHGE SL TIIN+AQ++VGSNNINLL P GQFG+
Sbjct: 703 KRNLKNECKVAQLTGYIAEHSAYHHGENSLQQTIINMAQDYVGSNNINLLLPCGQFGS 760
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 77/132 (58%), Gaps = 8/132 (6%)
Query: 219 DYKEYHTDTTVKFVVTMS---PDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKF 275
DY ++ ++ +K + ++ PD D + KVFKL+TT++ S+M FD + K+
Sbjct: 924 DYGDFSSNEFIKIKIKLNDSGPDI-----TDDIEKVFKLKTTISTSNMILFDCNKRIKKY 978
Query: 276 DTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKE 335
+ ILK+F R++YY KR++Y+ L + +L+NQ RFI + +L I + KK+
Sbjct: 979 NGAIDILKDFITTRVKYYTKRREYMIKQLQLQLQQLSNQIRFINMIINNELVIFRKSKKQ 1038
Query: 336 MIAELIKRKYDS 347
+++EL + +++
Sbjct: 1039 IVSELKRLNFNT 1050
>gi|68069037|ref|XP_676429.1| DNA topoisomerase II [Plasmodium berghei strain ANKA]
gi|56496123|emb|CAH96271.1| DNA topoisomerase II, putative [Plasmodium berghei]
Length = 1092
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 126/178 (70%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST KE K+YFS+++ H+I+F ++GD D I MAFSKK +++RK WL ++
Sbjct: 656 GLGTSTDKEFKQYFSDIQSHKIVFLWTGDRDGDSIDMAFSKKRIEDRKLWLQNFI----- 710
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+G D+ K ++Y +FVNKELI +S D ERSIP++ DG KPG RKVL+ C
Sbjct: 711 ---LGSYVDH----KEKDLSYYDFVNKELIYYSRYDTERSIPNIMDGWKPGQRKVLYGCF 763
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN R E KVAQL G +AEHSAYHHGE SL TIIN+AQ FVGSNNIN L+P GQFG+
Sbjct: 764 KRNLRNECKVAQLVGYIAEHSAYHHGESSLQQTIINMAQTFVGSNNINFLEPCGQFGS 821
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 64/110 (58%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY + + V F + M P KL +AE +GL KVFKL++TL ++M FD L ++ +
Sbjct: 982 DYIDNSSHEDVCFTIKMDPTKLKRAEEEGLEKVFKLKSTLTTTNMTLFDPNLKLQRYASE 1041
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRI 328
ILK+F RL Y RK+YL L E ++N+A+FI+ +G+L +
Sbjct: 1042 LDILKDFCFHRLNAYTDRKNYLISKLEKEKRIISNKAKFILAIINGELVV 1091
>gi|303388894|ref|XP_003072680.1| DNA topoisomerase II [Encephalitozoon intestinalis ATCC 50506]
gi|303301822|gb|ADM11320.1| DNA topoisomerase II [Encephalitozoon intestinalis ATCC 50506]
Length = 1141
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 107/180 (59%), Positives = 126/180 (70%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS +AK+YFSN+ H F + D I +AF+KK D RKTWL +
Sbjct: 577 GLGTSTSADAKQYFSNLPIHVKYFTPLIEEDKELIDLAFNKKKADARKTWLLNF------ 630
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D ++ I+ ++FVNKELILFS DN RSIPSL DGLKPG RKV+F+C
Sbjct: 631 --EPGTFLD----QSQPQISISDFVNKELILFSMADNIRSIPSLVDGLKPGQRKVMFSCF 684
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R E+KVAQL G V+E SAYHHGEQSL STI+NLAQ+FVGSNNINLL PIGQFG+ L
Sbjct: 685 KRNLRSEIKVAQLVGYVSEQSAYHHGEQSLCSTIVNLAQDFVGSNNINLLLPIGQFGSRL 744
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 76/127 (59%), Gaps = 10/127 (7%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D+KEYHT+ TV F V KL K+ + KL TT+ I++M FD + K+ T
Sbjct: 898 DFKEYHTEKTVSFSV-----KLSKSISN-----LKLSTTITINNMVCFDENLGIKKYSTP 947
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ILKEFY VRL YY+ RK+ + V+ E +KL N+ RFI E G+L I R+K E+I
Sbjct: 948 QEILKEFYDVRLRYYSIRKENMLKVMKEELVKLENKVRFIKEVSTGELVISRRRKGEVIF 1007
Query: 339 ELIKRKY 345
+L R+Y
Sbjct: 1008 DLESRRY 1014
>gi|358058373|dbj|GAA95892.1| hypothetical protein E5Q_02550 [Mixia osmundae IAM 14324]
Length = 1497
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 127/180 (70%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+ +A++YF +M+ HR+ F+ S D D + I MAF+KK D+RK WL +++
Sbjct: 703 GLGTSTAADARKYFGDMDSHRLGFRVSDDADRSLIDMAFNKKKADDRKDWLASFIP---- 758
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G D+ + K I ++FVN+ELIL+S DN RSIPSL DG KPG RKVLF C
Sbjct: 759 ----GTFLDH----SIKQIPISDFVNRELILYSMADNIRSIPSLVDGFKPGQRKVLFGCF 810
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN ++E+KVAQL G V+E SAYHHGE SL TI+ LAQNFVGSNNINLL P GQFGT L
Sbjct: 811 KRNLKKEIKVAQLGGYVSEQSAYHHGEASLYGTIVGLAQNFVGSNNINLLDPNGQFGTRL 870
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 75/131 (57%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYH +TTV F + ++ DG+ K FKL + ++ +M FD G + K+ T
Sbjct: 1032 DYKEYHANTTVHFKLQLTAKGKEAIAKDGIEKTFKLSSAVSTGNMVCFDLQGKIQKYSTP 1091
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL FY RL +Y KRK+YL L +L+NQARFI+ + +L I NRK+ E++A
Sbjct: 1092 EAILDAFYDFRLTFYQKRKEYLTKELELAHQRLSNQARFILAIINKELVIANRKRAELVA 1151
Query: 339 ELIKRKYDSDP 349
EL + Y P
Sbjct: 1152 ELRAKSYQPFP 1162
>gi|7437445|pir||T10466 DNA topoisomerase (ATP-hydrolyzing) (EC 5.99.1.3) II - malaria
parasite (Plasmodium falciparum)
gi|3980316|emb|CAA55900.1| DNA topoisomerase (ATP-hydrolysing) [Plasmodium falciparum]
Length = 1397
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 126/178 (70%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST +E K+YFS+++ H+I+F ++GD D I MAFSKK +++RK WL ++
Sbjct: 651 GLGTSTDREFKQYFSDIKNHKIMFLWTGDRDGDSIDMAFSKKRIEDRKLWLQNFI----- 705
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+G D+ K ++Y +FVNKELI +S D ERSIP++ DG KPG RKVL+ C
Sbjct: 706 ---LGSYVDH----KEKDLSYYDFVNKELIYYSRYDTERSIPNIMDGWKPGQRKVLYGCF 758
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN R E KVAQL G +AEHSAYHHGE SL TIIN+AQ FVGSNNIN L+P GQFG+
Sbjct: 759 KRNLRNECKVAQLVGYIAEHSAYHHGESSLQQTIINMAQTFVGSNNINFLEPCGQFGS 816
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 74/129 (57%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY + + + F + M P KL KAE +GL KVFKL++TL ++M FD L ++ T
Sbjct: 977 DYIDNSSHEDICFTIKMDPAKLQKAEEEGLEKVFKLKSTLTTTNMTLFDPNLKLQRYSTE 1036
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILKEF RL+ Y RK YL L E ++N+ +FI+ + +L + +KKK ++
Sbjct: 1037 LDILKEFCYQRLKAYENRKSYLISKLEKEKRIISNKTKFILAIVNNELIVNKKKKKVLVE 1096
Query: 339 ELIKRKYDS 347
EL ++ YD
Sbjct: 1097 ELYRKGYDP 1105
>gi|124809097|ref|XP_001348490.1| DNA topoisomerase II, putative [Plasmodium falciparum 3D7]
gi|23497385|gb|AAN36929.1|AE014821_16 DNA topoisomerase II, putative [Plasmodium falciparum 3D7]
Length = 1472
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 126/178 (70%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST +E K+YFS+++ H+I+F ++GD D I MAFSKK +++RK WL ++
Sbjct: 651 GLGTSTDREFKQYFSDIKNHKIMFLWTGDRDGDSIDMAFSKKRIEDRKLWLQNFI----- 705
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+G D+ K ++Y +FVNKELI +S D ERSIP++ DG KPG RKVL+ C
Sbjct: 706 ---LGSYVDH----KEKDLSYYDFVNKELIYYSRYDTERSIPNIMDGWKPGQRKVLYGCF 758
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN R E KVAQL G +AEHSAYHHGE SL TIIN+AQ FVGSNNIN L+P GQFG+
Sbjct: 759 KRNLRNECKVAQLVGYIAEHSAYHHGESSLQQTIINMAQTFVGSNNINFLEPCGQFGS 816
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 74/128 (57%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY + + + F + M P KL KAE +GL KVFKL++TL ++M FD L ++ T
Sbjct: 977 DYIDNSSHEDICFTIKMDPAKLQKAEEEGLEKVFKLKSTLTTTNMTLFDPNLKLQRYSTE 1036
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILKEF RL+ Y RK YL L E ++N+ +FI+ + +L + +KKK ++
Sbjct: 1037 LDILKEFCYQRLKAYENRKSYLISKLEKEKRIISNKTKFILAIVNNELIVNKKKKKVLVE 1096
Query: 339 ELIKRKYD 346
EL ++ YD
Sbjct: 1097 ELYRKGYD 1104
>gi|328862532|gb|EGG11633.1| hypothetical protein MELLADRAFT_46846 [Melampsora larici-populina
98AG31]
Length = 1259
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 119/178 (66%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +K+AK+YFS M HRI F + D I MAF+KK D RK WL R
Sbjct: 708 GLGTSDAKDAKKYFSKMSSHRIKFAPTQPTDRDLIDMAFNKKKADNRKEWL--------R 759
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D+ I+YTEF+NKELILFS DN RSIPS+ DG KPG RKVLF C
Sbjct: 760 GFEPGTHLDH----NVSQISYTEFINKELILFSMADNIRSIPSMVDGFKPGQRKVLFACF 815
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR + E+KVAQL G AEHSAYHHGEQSL TI+ LAQNFVGSNNIN+L P GQFGT
Sbjct: 816 KRKLKAEIKVAQLGGYCAEHSAYHHGEQSLTQTIVALAQNFVGSNNINVLSPNGQFGT 873
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 84/131 (64%), Gaps = 2/131 (1%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHT+TTV F++ ++ + DGL KVFKL ++ ++M FD +G + K+ T
Sbjct: 1036 DYREYHTETTVHFIIQLTDKGKEAIKKDGLEKVFKLTGNVSTTNMVCFDSFGKIKKYSTP 1095
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL++FY +RLEYY KRK++L L +L+NQARF++ + L I NRKK E++
Sbjct: 1096 EEILEDFYDIRLEYYQKRKEFLVQDLTTTYERLSNQARFVLMIIEKKLIINNRKKAEVVI 1155
Query: 339 ELIKRKYDSDP 349
+L RK D P
Sbjct: 1156 DL--RKLDFRP 1164
>gi|328909433|gb|AEB61384.1| DNA topoisomerase 2-beta-like protein, partial [Equus caballus]
Length = 334
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/122 (77%), Positives = 105/122 (86%)
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
R+R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DG KPG RKVLFT
Sbjct: 1 RQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFT 60
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
C KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT
Sbjct: 61 CFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGT 120
Query: 189 FL 190
L
Sbjct: 121 RL 122
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 41/50 (82%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFD 267
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD
Sbjct: 283 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFD 332
>gi|449516699|ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-like [Cucumis
sativus]
Length = 1460
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 126/178 (70%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKE +EYF + +H+ F + DND I +AFSKK +++RK WL R
Sbjct: 574 GLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDRKNWL--------R 625
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D +T K I Y++FVNKELILFS D +RSIPS+ DGLKPG RK+LF
Sbjct: 626 QFEPGTHLD----QTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 681
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN +E KV+Q +G V+EHSAYHHGEQSL STII +AQ+FVGSNNINLL P GQFGT
Sbjct: 682 KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGT 739
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 81/132 (61%), Gaps = 1/132 (0%)
Query: 222 EYHTD-TTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQ 280
++H+D V V ++ + + A +GL K FKL TT++ S+M FD GV+ K+DT Q
Sbjct: 917 DHHSDDKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQ 976
Query: 281 ILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAEL 340
IL+EF+ +RLE+Y KRK L L E LKL N+ RFI+ + ++++ NRKK ++ EL
Sbjct: 977 ILEEFFPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHEL 1036
Query: 341 IKRKYDSDPVKS 352
+ + P K+
Sbjct: 1037 QAKGFTPFPKKT 1048
>gi|449463998|ref|XP_004149716.1| PREDICTED: DNA topoisomerase 2-like [Cucumis sativus]
Length = 1459
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 126/178 (70%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKE +EYF + +H+ F + DND I +AFSKK +++RK WL R
Sbjct: 574 GLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDRKNWL--------R 625
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D +T K I Y++FVNKELILFS D +RSIPS+ DGLKPG RK+LF
Sbjct: 626 QFEPGTHLD----QTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 681
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN +E KV+Q +G V+EHSAYHHGEQSL STII +AQ+FVGSNNINLL P GQFGT
Sbjct: 682 KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGT 739
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 81/132 (61%), Gaps = 1/132 (0%)
Query: 222 EYHTD-TTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQ 280
++H+D V V ++ + + A +GL K FKL TT++ S+M FD GV+ K+DT Q
Sbjct: 917 DHHSDDKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQ 976
Query: 281 ILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAEL 340
IL+EF+ +RLE+Y KRK L L E LKL N+ RFI+ + ++++ NRKK ++ EL
Sbjct: 977 ILEEFFPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHEL 1036
Query: 341 IKRKYDSDPVKS 352
+ + P K+
Sbjct: 1037 QAKGFTPFPKKT 1048
>gi|168011945|ref|XP_001758663.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690273|gb|EDQ76641.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1238
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKE KEYF + +H+ FK+ + D I MAFSKK ++ RKTWL R
Sbjct: 611 GLGTSTSKEGKEYFRELSKHKKDFKWESEMDGDAIEMAFSKKKIEARKTWL--------R 662
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D T I Y++FVNKELILFS D RSIPS+ DGLKPG RK+LF C
Sbjct: 663 HYEPGTFLDM----TADKIKYSDFVNKELILFSMADLARSIPSMVDGLKPGQRKILFCCF 718
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + KVAQ +G V+EHSAYHHGE SL STII +AQNFVGSNNINLL P GQFGT
Sbjct: 719 KRNFVTQAKVAQFSGYVSEHSAYHHGEASLASTIIGMAQNFVGSNNINLLSPEGQFGT 776
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 86/134 (64%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D++E++TDT V F +T+S + + A +GL K FKL TT++ S+M FD G++ K+DT
Sbjct: 944 DFREHNTDTKVHFELTLSEENMAIALAEGLVKKFKLTTTISTSNMHLFDAKGIIKKYDTP 1003
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
QIL+EF+ +RL+ Y KRK L E +K+ N+ RFI+ G++ + NRK+ ++++
Sbjct: 1004 EQILEEFFHIRLDLYVKRKAVQLQNLQYELVKVDNKVRFILGVVKGEIIVNNRKRIDLLS 1063
Query: 339 ELIKRKYDSDPVKS 352
EL + + P K+
Sbjct: 1064 ELQHKGFAPFPKKA 1077
>gi|221060064|ref|XP_002260677.1| DNA topoisomerase II [Plasmodium knowlesi strain H]
gi|193810751|emb|CAQ42649.1| DNA topoisomerase II, putative [Plasmodium knowlesi strain H]
Length = 1506
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 127/178 (71%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST KE K+YFS+++ H+I+F ++GD D I MAFSKK +++RK WL ++
Sbjct: 651 GLGTSTDKEFKQYFSDIKNHKIMFLWTGDRDGDSIDMAFSKKRIEDRKIWLQNFV----- 705
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
IG Y+ K K ++Y +FVNKELI +S D ERSIP++ DG KPG RKVL+ C
Sbjct: 706 -----IGS-YVDHKE-KDLSYYDFVNKELIYYSRYDTERSIPNIMDGWKPGQRKVLYGCF 758
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + E KVAQL G +AEHSAYHHGE SL TIIN+AQ FVGSNNIN L+P GQFG+
Sbjct: 759 KRNLKNECKVAQLVGYIAEHSAYHHGESSLQQTIINMAQTFVGSNNINFLEPCGQFGS 816
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY + + + F + M P KL KAE +GL KVFKL++TL ++M FD L K+ T
Sbjct: 977 DYIDNSSHEEICFTIKMDPAKLRKAEEEGLEKVFKLKSTLTTTNMTLFDYNLKLQKYATE 1036
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIV 319
ILKEF RL Y RK YL L E ++N+++FI+
Sbjct: 1037 LDILKEFCFQRLNAYENRKSYLIAKLEKEKKIISNKSKFIL 1077
>gi|209879055|ref|XP_002140968.1| DNA gyrase/topoisomerase IV, A subunit family protein
[Cryptosporidium muris RN66]
gi|209556574|gb|EEA06619.1| DNA gyrase/topoisomerase IV, A subunit family protein
[Cryptosporidium muris RN66]
Length = 1645
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 125/178 (70%), Gaps = 8/178 (4%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST E KEYF+N+E H I F + D DD I MAFSKK ++RK W+ ++ E
Sbjct: 736 GLGTSTDLEFKEYFTNIENHSIEFDWYNDEDDEAIDMAFSKKRTEDRKKWIESYQE---- 791
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G DY +++ Y +F++KEL+LFS D RSIP++ DGLKPG RKVL++
Sbjct: 792 ----GTYIDYSMDNICRSLRYRDFIDKELVLFSRYDTARSIPNVIDGLKPGQRKVLYSVF 847
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+ E+KVAQLAG VAEHSAYHHGE SL STI+N+AQ+FVGSNN+NLLQP GQFG+
Sbjct: 848 KKKLNNEMKVAQLAGYVAEHSAYHHGEASLQSTIVNMAQDFVGSNNLNLLQPCGQFGS 905
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY++ + +V + + PDK +AE +G+ KVFKL++TL+ S+M FD + +++T
Sbjct: 1135 DYRDNSSHDSVHITIRIKPDKFIQAENEGIEKVFKLKSTLSTSNMTLFDNNSHIVRYETE 1194
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILKEF RL+ Y KRK YL L E + L + F+ + ++I N+ + ++
Sbjct: 1195 LDILKEFIPTRLQMYEKRKRYLLSKLNYERVILEQKILFLNLVIEDRMKISNKSRSILVQ 1254
Query: 339 ELIKRKYDS 347
EL K S
Sbjct: 1255 ELKKNNLKS 1263
>gi|399216022|emb|CCF72710.1| unnamed protein product [Babesia microti strain RI]
Length = 1309
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/178 (57%), Positives = 125/178 (70%), Gaps = 5/178 (2%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST E KEYF N++ H I FK+ + D I MAF+KK V++RK WL + +
Sbjct: 594 GLGTSTDTEFKEYFKNIKDHLIDFKWRNEECDNKIDMAFNKKRVEDRKRWLQNHVA-MQE 652
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+G D+ + K ++Y +FV+KEL+LFS D ERSIPS+ DGLKPG RKVLF C
Sbjct: 653 EGVASLGVDH----SCKELSYQDFVDKELVLFSIYDTERSIPSIMDGLKPGQRKVLFGCF 708
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN R E KVAQL G +AEHSAYHHGE SL TIIN+AQ FVGSNNINLL+P GQFG+
Sbjct: 709 KRNLRTECKVAQLTGYIAEHSAYHHGETSLQQTIINMAQTFVGSNNINLLEPCGQFGS 766
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%)
Query: 242 KAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLE 301
KA L K+ KL+++++++++ FD LTK+ ILKEF RL+ Y KRK+YL
Sbjct: 955 KAGTTDLEKLLKLRSSISLTNLTLFDTNRKLTKYPNELAILKEFANERLKAYGKRKEYLL 1014
Query: 302 GVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKYD 346
+ L+NQ RFI + ++ I NRKK ++I EL + K++
Sbjct: 1015 VKYTQDLKILSNQVRFIKMVINEEIVIFNRKKVDLITELKRLKFE 1059
>gi|156101890|ref|XP_001616638.1| DNA topoisomerase II [Plasmodium vivax Sal-1]
gi|148805512|gb|EDL46911.1| DNA topoisomerase II, putative [Plasmodium vivax]
Length = 1502
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 127/178 (71%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST KE K+YFS+++ H+I+F ++GD D I MAFSKK +++RK WL ++
Sbjct: 662 GLGTSTDKEFKQYFSDIKNHKIMFLWTGDRDGDSIDMAFSKKRIEDRKLWLQNFI----- 716
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
IG Y+ K K ++Y +FVNKELI +S D ERSIP++ DG KPG RKVL+ C
Sbjct: 717 -----IGS-YVDHKE-KDLSYYDFVNKELIYYSRYDTERSIPNIMDGWKPGQRKVLYGCF 769
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + E KVAQL G +AEHSAYHHGE SL TIIN+AQ FVGSNNIN L+P GQFG+
Sbjct: 770 KRNLKNECKVAQLVGYIAEHSAYHHGESSLQQTIINMAQTFVGSNNINFLEPCGQFGS 827
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 59/101 (58%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY + + + F + M P K+ KAE +GL KVFKL++TL ++M FD L ++ T
Sbjct: 988 DYIDNSSHEDICFTIKMDPAKMKKAEEEGLEKVFKLKSTLTTTNMTLFDPNLKLQRYSTE 1047
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIV 319
ILK+F RL+ Y RK YL L E ++N+++FI+
Sbjct: 1048 LDILKDFCFHRLKAYENRKSYLISKLEKEKKIISNKSKFIL 1088
>gi|449328926|gb|AGE95201.1| DNA topoisomerase II [Encephalitozoon cuniculi]
Length = 1144
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/180 (57%), Positives = 122/180 (67%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS +AK+YFSN+ H F D I +AF+KK D RKTWL
Sbjct: 577 GLGTSTSADAKQYFSNLPVHVKSFTPLAAEDKELIDLAFNKKKADARKTWL--------- 627
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ ++ I+ ++FVNKELILFS DN RSIPSL DGLKPG RKV+F+C
Sbjct: 628 ---LNFAPGTFLDQSQTQISISDFVNKELILFSMADNIRSIPSLVDGLKPGQRKVIFSCF 684
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R E+KVAQL G V+E SAYHHGEQSL STI+NLAQ+FVGSNNINLL PIGQFG+ L
Sbjct: 685 KRNLRSEIKVAQLVGYVSEQSAYHHGEQSLCSTIVNLAQDFVGSNNINLLLPIGQFGSRL 744
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 217 SNDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
+ D+KEYHT+ TV F V KL K + KL +T+ +++M FD + K+
Sbjct: 896 ARDFKEYHTEKTVSFTV-----KLSKPVSN-----LKLNSTITVNNMVCFDENLRIKKYA 945
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
T +ILKEFY VRL YY RK+ + V+ E KL N+ RFI E G+L I R+K E+
Sbjct: 946 TPQEILKEFYGVRLRYYLIRKENMLKVMREELEKLENKVRFIKEVSMGELVISRRRKGEV 1005
Query: 337 IAELIKRKY 345
I +L R Y
Sbjct: 1006 IFDLESRGY 1014
>gi|67590421|ref|XP_665482.1| DNA topoisomerase II [Cryptosporidium hominis TU502]
gi|54656191|gb|EAL35251.1| DNA topoisomerase II [Cryptosporidium hominis]
Length = 1069
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 122/178 (68%), Gaps = 8/178 (4%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST E KEYF+ +E H I F + D DD I MAFSKK ++RK W+ ++ E
Sbjct: 10 GLGTSTDLEFKEYFTKIENHSIEFDWMDDQDDEAIDMAFSKKRTEDRKNWIESYKE---- 65
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G DY + + Y +F++KEL+LFS D RSIP+L DGLKPG RKVLF
Sbjct: 66 ----GTYVDYSINNQCRNLRYFDFIHKELVLFSRYDTTRSIPNLLDGLKPGQRKVLFATF 121
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+ E+KVAQLAG VAEHSAYHHGE SL STI+N+AQNFVGSNN+NLL+P GQFG+
Sbjct: 122 KKKLNNELKVAQLAGYVAEHSAYHHGESSLQSTIVNMAQNFVGSNNLNLLEPCGQFGS 179
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 75/124 (60%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY++ + +V V M P+KL +AEM+G+ K+F+L++TL+ S+M FD + +++T
Sbjct: 414 DYRDNSSHESVHITVRMRPEKLQQAEMEGIEKIFRLKSTLSTSNMTLFDHNSRIVRYETE 473
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILKEF +RLE Y KRK+YL L E L + F+ G + + N+ K+ +++
Sbjct: 474 LDILKEFIPIRLEMYEKRKNYLLSKLNYEKCLLEQKILFLKLVIQGVIGLSNKSKETLVS 533
Query: 339 ELIK 342
+L K
Sbjct: 534 DLKK 537
>gi|19074112|ref|NP_584718.1| DNA TOPOISOMERASE II [Encephalitozoon cuniculi GB-M1]
gi|19068754|emb|CAD25222.1| DNA TOPOISOMERASE II [Encephalitozoon cuniculi GB-M1]
Length = 1144
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/180 (57%), Positives = 122/180 (67%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS +AK+YFSN+ H F D I +AF+KK D RKTWL
Sbjct: 577 GLGTSTSADAKQYFSNLPVHVKSFTPLAAEDKELIDLAFNKKKADARKTWL--------- 627
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ ++ I+ ++FVNKELILFS DN RSIPSL DGLKPG RKV+F+C
Sbjct: 628 ---LNFAPGTFLDQSQTQISISDFVNKELILFSMADNIRSIPSLVDGLKPGQRKVIFSCF 684
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R E+KVAQL G V+E SAYHHGEQSL STI+NLAQ+FVGSNNINLL PIGQFG+ L
Sbjct: 685 KRNLRSEIKVAQLVGYVSEQSAYHHGEQSLCSTIVNLAQDFVGSNNINLLLPIGQFGSRL 744
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 217 SNDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
+ D+KEYHT+ TV F V KL K + KL +T+ +++M FD + K+
Sbjct: 896 ARDFKEYHTEKTVSFTV-----KLSKPVSN-----LKLNSTITVNNMVCFDENLRIKKYA 945
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
T +ILKEFY VRL YY RK+ + V+ E KL N+ RFI E G+L I R+K E+
Sbjct: 946 TPQEILKEFYGVRLRYYLIRKENMLKVMREELEKLENKVRFIKEVSMGELVISRRRKGEV 1005
Query: 337 IAELIKRKY 345
I +L R Y
Sbjct: 1006 IFDLESRGY 1014
>gi|307110827|gb|EFN59062.1| hypothetical protein CHLNCDRAFT_137783 [Chlorella variabilis]
Length = 1566
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 127/180 (70%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+ EAK+YF+N++ HR F + GD D + MAFSKK V++RK WL +
Sbjct: 607 GLGTSTADEAKQYFANIQSHRKEFVWDGDADGQALEMAFSKKKVEDRKQWLQAFSP---- 662
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G D+ T I+Y++FV+KELILFS D ERSIP++ DGLKPG RK++F C
Sbjct: 663 ----GTFLDH----TADTISYSQFVHKELILFSRADLERSIPNMVDGLKPGQRKIMFACF 714
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN + +VKV+QL+G V+EHSAYHHGE SL TI+ LAQ+FVGSNN+N L P GQFGT L
Sbjct: 715 KRNLKTDVKVSQLSGYVSEHSAYHHGEASLSGTIVGLAQDFVGSNNVNYLVPQGQFGTRL 774
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 79/131 (60%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTD V F VT+S K+ +A GL FKL+T ++ +M F+ G + K+ +
Sbjct: 940 DYKEYHTDLVVHFRVTLSESKMREALAAGLLDKFKLKTKISTGNMMLFNAEGAIQKYASP 999
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++FY +RL YY KR+ L A+ L+++N+ RFI+ G L++ NR+KK++
Sbjct: 1000 EDILRDFYDLRLAYYVKRRAALLRAAEADLLRISNKVRFILAVVGGQLKLSNRRKKDVEG 1059
Query: 339 ELIKRKYDSDP 349
EL YD P
Sbjct: 1060 ELEDEGYDKLP 1070
>gi|452825658|gb|EME32653.1| DNA topoisomerase II [Galdieria sulphuraria]
Length = 1396
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 103/180 (57%), Positives = 125/180 (69%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+ EAKEYFS+++ H I F +SG++D I MAFSK+ V ERK WL
Sbjct: 591 GLGTSTAAEAKEYFSHLDLHVIDFIWSGEHDMVAIDMAFSKQRVQERKEWLA-------- 642
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ D + +TY+ FVNKELILFS DN RSIPS+ DGLKP RKVLF C
Sbjct: 643 ----DVDPDTYFDHIADDLTYSNFVNKELILFSLSDNARSIPSVIDGLKPSQRKVLFGCF 698
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
K+ R++KVAQLAG +AE++AYHHGE SLM+TI+ LAQNFVG+ NINLL P GQFGT L
Sbjct: 699 KKKLTRDIKVAQLAGYIAENAAYHHGEMSLMATIVGLAQNFVGACNINLLVPSGQFGTRL 758
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 70/121 (57%)
Query: 225 TDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKE 284
T+ V F++ + + + E G HK FKL +TL+ S+M F+ G + K+D +LKE
Sbjct: 929 TERLVDFLINLHEEAYKQCETQGFHKKFKLGSTLSTSNMVLFNAEGKIQKYDDPIDMLKE 988
Query: 285 FYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRK 344
F+ +RL Y RK YL L + KL N+ RFI++ G++++ N K+K++I L K
Sbjct: 989 FFHIRLRLYESRKQYLLQELTVQVEKLENRVRFILQVIQGEIKVANVKRKDLIVTLTKHH 1048
Query: 345 Y 345
+
Sbjct: 1049 F 1049
>gi|83317979|ref|XP_731396.1| DNA topoisomerase II [Plasmodium yoelii yoelii 17XNL]
gi|23491424|gb|EAA22961.1| DNA topoisomerase II, putative [Plasmodium yoelii yoelii]
Length = 1489
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 125/178 (70%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST KE K+YFS+++ H+I F ++GD D I MAFSKK +++RK WL ++
Sbjct: 657 GLGTSTDKEFKQYFSDIQSHKIFFLWTGDRDGDSIDMAFSKKRIEDRKLWLQNFI----- 711
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+G D+ K ++Y +FVNKELI +S D ERSIP++ DG KPG RKVL+ C
Sbjct: 712 ---LGSYVDH----KEKDLSYYDFVNKELIYYSRYDTERSIPNIMDGWKPGQRKVLYGCF 764
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + E KVAQL G +AEHSAYHHGE SL TIIN+AQ FVGSNNIN L+P GQFG+
Sbjct: 765 KRNLKNECKVAQLVGYIAEHSAYHHGESSLQQTIINMAQTFVGSNNINFLEPCGQFGS 822
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 75/129 (58%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY + + V F + M P KL +AE +GL KVFKL++TL ++M FD L ++ +
Sbjct: 983 DYIDNSSHEDVCFTIKMDPIKLKRAEEEGLEKVFKLKSTLTTTNMTLFDPKLKLQRYASE 1042
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILK+F RL Y RK+YL L E ++N+ +FI+ +G+L + +KKK ++
Sbjct: 1043 LDILKDFCFHRLNAYTDRKNYLISKLEKEKRIISNKTKFILAIINGELVVNKKKKKILVE 1102
Query: 339 ELIKRKYDS 347
EL ++ YD
Sbjct: 1103 ELYRKGYDP 1111
>gi|395326395|gb|EJF58805.1| type II DNA topoisomerase [Dichomitus squalens LYAD-421 SS1]
Length = 1540
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 128/178 (71%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++A++YF +M+RH I F S + D I +AFSKK D+RK WL R
Sbjct: 689 GLGTSKDEDARDYFRDMKRHMIPFSTSKEGDRELIELAFSKKKADDRKEWL--------R 740
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ T + I +EF+N+ELILFS DN RSIPS+ DGLKPG RKV+++C
Sbjct: 741 QFKPGTYLDH----TQREIPLSEFINRELILFSMADNIRSIPSVADGLKPGQRKVIWSCF 796
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN ++E+KVAQL G V+E SAYHHGE SLM+TIINLAQ+FVGSNNINLL P GQFGT
Sbjct: 797 KRNLKKEIKVAQLVGYVSEVSAYHHGEASLMATIINLAQDFVGSNNINLLMPNGQFGT 854
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+E+H + V F+VTMS + +AE G H+ FKL T + S+M FD G + K++
Sbjct: 1015 DYEEHHNNMNVHFIVTMSAKGMEEAEKQGFHEYFKLSTKINTSNMVCFDFDGKIKKYNAP 1074
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I+++FY RL YY KRKDYL L + KL NQARF+ D +L + NR+K +++
Sbjct: 1075 EEIIEDFYPKRLAYYQKRKDYLVNELEVQLDKLNNQARFVKMIIDRELSVSNRRKADIVQ 1134
Query: 339 ELIKRKYDSDP 349
+L +++ P
Sbjct: 1135 DLRNKQFRPFP 1145
>gi|168033077|ref|XP_001769043.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679677|gb|EDQ66121.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1172
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKE KEYF + +H+ FK+ + D I MAFSKK ++ RKTWL R
Sbjct: 610 GLGTSTSKEGKEYFRELVKHKKDFKWESEMDGDAIEMAFSKKKIEARKTWL--------R 661
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D T + I Y +FVNKELILFS D RSIPS+ DGLKPG RK+LF C
Sbjct: 662 HYEPGTFLDM----TAEKINYRDFVNKELILFSMADLARSIPSMVDGLKPGQRKILFCCF 717
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + KVAQ +G V+EHSAYHHGE SL STII +AQNFVGSNNINLL P GQFGT
Sbjct: 718 KRNFVTQAKVAQFSGYVSEHSAYHHGEASLASTIIGMAQNFVGSNNINLLSPEGQFGT 775
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 86/134 (64%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D++E++TDT V F +++S + + A +GL K FKL TT++ S+M FD G++ K+DT
Sbjct: 943 DFREHNTDTKVHFELSLSEENMAIALAEGLVKKFKLTTTISTSNMHLFDNKGIIKKYDTP 1002
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
QIL+EF+ +RL+ Y KRK L E K+ N+ RFI+ G++ + NRK+ +++A
Sbjct: 1003 EQILEEFFHIRLDMYVKRKAVQLQNLEYELHKVDNKVRFILGVVKGEIIVNNRKRADLLA 1062
Query: 339 ELIKRKYDSDPVKS 352
+L K+ + P KS
Sbjct: 1063 DLQKKGFTPFPKKS 1076
>gi|66357004|ref|XP_625680.1| DNA topoisomerase II [Cryptosporidium parvum Iowa II]
gi|46226680|gb|EAK87659.1| DNA topoisomerase II [Cryptosporidium parvum Iowa II]
Length = 1797
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 122/178 (68%), Gaps = 8/178 (4%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST E KEYF+ +E H I F + D DD I MAFSKK ++RK W+ ++ E
Sbjct: 740 GLGTSTDLEFKEYFTKIENHSIEFDWMDDQDDEAIDMAFSKKRTEDRKNWIESYKE---- 795
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G DY + + Y +F++KEL+LFS D RSIP+L DGLKPG RKVLF
Sbjct: 796 ----GTYVDYSINNQCRNLRYFDFIHKELVLFSRYDTTRSIPNLLDGLKPGQRKVLFATF 851
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+ E+KVAQLAG VAEHSAYHHGE SL STI+N+AQNFVGSNN+NLL+P GQFG+
Sbjct: 852 KKKLNNELKVAQLAGYVAEHSAYHHGESSLQSTIVNMAQNFVGSNNLNLLEPCGQFGS 909
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 76/129 (58%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY++ + +V V M P+KL +AEM+G+ K+F+L++TL+ S+M FD + +++T
Sbjct: 1144 DYRDNSSHESVHITVRMRPEKLQQAEMEGIEKIFRLKSTLSTSNMTLFDHNSRIVRYETE 1203
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILKEF +RLE Y KRK+YL L E L + F+ G + + N+ K+ +++
Sbjct: 1204 LDILKEFIPIRLEMYEKRKNYLLSKLNYEKCLLEQKILFLKLVIQGVIGLSNKSKETLVS 1263
Query: 339 ELIKRKYDS 347
+L K S
Sbjct: 1264 DLKKNNIKS 1272
>gi|407419934|gb|EKF38372.1| DNA topoisomerase II, putative [Trypanosoma cruzi marinkellei]
Length = 1488
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 126/180 (70%), Gaps = 8/180 (4%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +KE +EYF N++RHR+ F + DDA I MAF+K V+ERK W+T +
Sbjct: 593 GLGTSGAKEGREYFENIDRHRLDFVHEDATDDARIVMAFAKDKVEERKHWITQF------ 646
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + E Y + + Y+EFV+KELILFS D ERSIPS+ DGLKPG RK++F+
Sbjct: 647 KANTNVNESMNYN--VRTVRYSEFVDKELILFSVADCERSIPSVIDGLKPGQRKIIFSSF 704
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR R +KV QLAG V+EH+AYHHGEQSL+ TI+ LAQNFVGSNN+ LLQ GQFGT L
Sbjct: 705 KRRLTRSIKVVQLAGYVSEHAAYHHGEQSLVQTIVGLAQNFVGSNNVPLLQQDGQFGTRL 764
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 84/136 (61%), Gaps = 1/136 (0%)
Query: 220 YKEYHTDTTVKFVVTMSPDKL-HKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
Y+E++TD TV F V + P+ L H + + +L+ + +++ AFDR G +TK+
Sbjct: 921 YREHNTDVTVDFEVFLHPEVLQHWVAQGCVEERLQLREYIHATNIIAFDREGQITKYRDA 980
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+LKEFY VRLEYYAKR+D+L G L + A KL N RF+ E DG L + R+KKE++
Sbjct: 981 EAVLKEFYLVRLEYYAKRRDFLIGDLRSVASKLENMVRFVTEVVDGRLIVTRRRKKELLE 1040
Query: 339 ELIKRKYDSDPVKSWK 354
EL +R Y P++ K
Sbjct: 1041 ELRQRGYAPFPLQQKK 1056
>gi|71417991|ref|XP_810722.1| DNA topoisomerase II [Trypanosoma cruzi strain CL Brener]
gi|70875297|gb|EAN88871.1| DNA topoisomerase II, putative [Trypanosoma cruzi]
Length = 1484
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 126/180 (70%), Gaps = 8/180 (4%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +KE +EYF N++RHR+ F + DDA I MAF+K V+ERK W+T +
Sbjct: 593 GLGTSGAKEGREYFENIDRHRLDFVHEDATDDARIVMAFAKDKVEERKHWITQF------ 646
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + E Y + + Y+EFV+KELILFS D ERSIPS+ DGLKPG RK++F+
Sbjct: 647 KANTNVNESMNYN--VRTVRYSEFVDKELILFSVADCERSIPSVIDGLKPGQRKIIFSSF 704
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR R +KV QLAG V+EH+AYHHGEQSL+ TI+ LAQNFVGSNN+ LLQ GQFGT L
Sbjct: 705 KRRLTRSIKVVQLAGYVSEHAAYHHGEQSLVQTIVGLAQNFVGSNNVPLLQQDGQFGTRL 764
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 85/136 (62%), Gaps = 1/136 (0%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDG-LHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
Y+E++TD TV F V + P+ LH G + + +L+ + +++ AFDR G +TK+
Sbjct: 921 YREHNTDVTVDFEVFLHPEVLHHWVAQGCVEERLQLREYIHATNIIAFDREGQITKYRDA 980
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+LKEFY VRLEYYAKR+D+L G L + A KL N RF+ E DG L + R+KKE++
Sbjct: 981 EAVLKEFYLVRLEYYAKRRDFLIGDLRSVASKLENMVRFVTEVVDGRLIVTRRRKKELLE 1040
Query: 339 ELIKRKYDSDPVKSWK 354
EL +R Y P++ K
Sbjct: 1041 ELRQRGYAPFPLQQKK 1056
>gi|71424000|ref|XP_812644.1| DNA topoisomerase II [Trypanosoma cruzi strain CL Brener]
gi|70877452|gb|EAN90793.1| DNA topoisomerase II, putative [Trypanosoma cruzi]
Length = 1476
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 126/180 (70%), Gaps = 8/180 (4%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +KE +EYF N++RHR+ F + DDA I MAF+K V+ERK W+T +
Sbjct: 593 GLGTSGAKEGREYFENIDRHRLDFVHEDATDDARIVMAFAKDKVEERKHWITQF------ 646
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + E Y + + Y+EFV+KELILFS D ERSIPS+ DGLKPG RK++F+
Sbjct: 647 KANTNVNESMNYN--VRTVRYSEFVDKELILFSVADCERSIPSVIDGLKPGQRKIIFSSF 704
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR R +KV QLAG V+EH+AYHHGEQSL+ TI+ LAQNFVGSNN+ LLQ GQFGT L
Sbjct: 705 KRRLTRSIKVVQLAGYVSEHAAYHHGEQSLVQTIVGLAQNFVGSNNVPLLQQDGQFGTRL 764
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 85/136 (62%), Gaps = 1/136 (0%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDG-LHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
Y+E++TD TV F V + P+ LH G + + +L+ + +++ AFDR G +TK+
Sbjct: 921 YREHNTDVTVDFEVFLHPEVLHHWVAQGCVEERLQLREYIHATNIIAFDREGQITKYRDA 980
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+LKEFY VRLEYYAKR+D+L G L + A KL N RF+ E DG L + R+KKE++
Sbjct: 981 EAVLKEFYLVRLEYYAKRRDFLIGDLRSVASKLENMVRFVTEVVDGRLIVTRRRKKELLE 1040
Query: 339 ELIKRKYDSDPVKSWK 354
EL +R Y P++ K
Sbjct: 1041 ELRQRGYAPFPLQQKK 1056
>gi|390603939|gb|EIN13330.1| type II DNA topoisomerase [Punctularia strigosozonata HHB-11173
SS5]
Length = 1559
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 125/178 (70%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +A +YFS+ME+H I F + D D I +AFSKK D+RK WL +CR
Sbjct: 672 GLGTSKDSDAMDYFSHMEKHMIPFATTQDGDRELIDLAFSKKKADDRKEWL----RQCRP 727
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
YL I Y++F+NKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 728 GT-------YL-NHDVDEIPYSDFINKELILFSMADNIRSIPSVADGLKPGQRKVIWGCF 779
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+R ++E+KVAQL G +AEH+AYHHGEQSLM+TI+NLAQ++VGSNN+NLL P GQ+GT
Sbjct: 780 RRKLKKEIKVAQLVGYIAEHAAYHHGEQSLMATIVNLAQDYVGSNNLNLLMPNGQYGT 837
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMD--GLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
DYKE+H + V FV+ + + K E + GL + FK+ T + S+M FD G + K++
Sbjct: 998 DYKEHHNNINVHFVINTTAKDMEKIEKEKGGLEEYFKMTTKINTSNMICFDFEGKIRKYN 1057
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
T +I++EFY +RL YY KRKD++ L + KL+NQARF+ D +L + NRKK ++
Sbjct: 1058 TPEEIIEEFYPMRLAYYQKRKDFMANELQLQFEKLSNQARFVQMIVDRELSVSNRKKADI 1117
Query: 337 IAELIKRKYDSDPVKSWKMKQNKENA 362
+AEL KR++ P K K K ENA
Sbjct: 1118 VAELRKREFRPFP-KVAKAKAAGENA 1142
>gi|403344015|gb|EJY71343.1| DNA topoisomerase 2 [Oxytricha trifallax]
Length = 1554
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 126/179 (70%), Gaps = 14/179 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+ EAK+YF ++++H+I F Y D D+ I +AFSK D+RK WL+ +
Sbjct: 602 GLGTSTALEAKQYFQSIKKHQINFYYKDDKDEDKILLAFSKTKADDRKNWLSQFNPN--- 658
Query: 71 RKEMGIGEDYLYTKTTK-AITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
+Y +K + Y EFV++ELI FS DN RSIPS+ DGLKPG RK+LF C
Sbjct: 659 ----------IYVDHSKNKLCYAEFVDQELIHFSIADNMRSIPSVMDGLKPGQRKILFAC 708
Query: 130 LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR + E+KVAQL+G +AEH+AYHHGE SL TIIN+AQ+FVGSNN+NLLQPIGQFGT
Sbjct: 709 FKRKLKAEIKVAQLSGYIAEHTAYHHGEISLQMTIINMAQDFVGSNNLNLLQPIGQFGT 767
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDG--LHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
D KE+H D TV F V + KL +D + K FKL + L +++ FDR + K++
Sbjct: 930 DIKEFHQDNTVHFEVKFNRSKLDIGTLDDDQIEKKFKLTSNLNCTNLVLFDRNCKIKKYE 989
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
QIL+EF+ RL Y KRK+ + ++ + KL+N+ RF+ DG L I +KKKE
Sbjct: 990 NECQILEEFFNYRLNLYKKRKESMLKIITEQYEKLSNKYRFVASIIDGSLEI-YKKKKED 1048
Query: 337 IAELIKRK 344
+ +L+K K
Sbjct: 1049 VVKLLKEK 1056
>gi|407843567|gb|EKG01478.1| DNA topoisomerase II, putative [Trypanosoma cruzi]
Length = 1461
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 126/180 (70%), Gaps = 8/180 (4%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +KE +EYF N++RHR+ F + DDA I MAF+K V+ERK W+T +
Sbjct: 593 GLGTSGAKEGREYFENIDRHRLDFVHEDATDDARIVMAFAKDKVEERKHWITQF------ 646
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + E Y + + Y+EFV+KELILFS D ERSIPS+ DGLKPG RK++F+
Sbjct: 647 KTNTNVNESMNYN--VRTVRYSEFVDKELILFSVADCERSIPSVIDGLKPGQRKIIFSSF 704
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR R +KV QLAG V+EH+AYHHGEQSL+ TI+ LAQNFVGSNN+ LLQ GQFGT L
Sbjct: 705 KRRLTRSIKVVQLAGYVSEHAAYHHGEQSLVQTIVGLAQNFVGSNNVPLLQQDGQFGTRL 764
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 85/136 (62%), Gaps = 1/136 (0%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDG-LHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
Y+E++TD TV F V + P+ LH G + + +L+ + +++ AFDR G +TK+
Sbjct: 921 YREHNTDVTVDFEVFLHPEVLHHWVAQGCVEERLQLREYIHATNIIAFDREGQITKYRDA 980
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+LKEFY VRLEYYAKR+D+L G L + A KL N RF+ E DG L + R+KKE++
Sbjct: 981 EAVLKEFYLVRLEYYAKRRDFLIGDLRSVASKLENMVRFVTEVVDGRLIVTRRRKKELLE 1040
Query: 339 ELIKRKYDSDPVKSWK 354
EL +R Y P++ K
Sbjct: 1041 ELRQRGYAPFPLQQKK 1056
>gi|58258575|ref|XP_566700.1| DNA topoisomerase II [Cryptococcus neoformans var. neoformans
JEC21]
gi|134106673|ref|XP_778347.1| hypothetical protein CNBA3470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50261050|gb|EAL23700.1| hypothetical protein CNBA3470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222837|gb|AAW40881.1| DNA topoisomerase II, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1272
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/180 (57%), Positives = 128/180 (71%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS +AK+YFS++++HR+ F+ D I MAF+KK D+RK WL R
Sbjct: 699 GLGTSTSADAKKYFSDLDKHRLAFETMQPEDRQLIDMAFNKKKADDRKEWL--------R 750
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +++ ++FVNKELILFS DN RSIPS+ DGLKPG RKVLF C
Sbjct: 751 QFKPGTYLDH----DVQSLPISDFVNKELILFSMADNIRSIPSVADGLKPGQRKVLFGCF 806
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +E+KVAQLAG V+E +AYHHGE SL STI+ LAQNFVGSNNINLL P GQFGT L
Sbjct: 807 KRNLTKEIKVAQLAGYVSEKTAYHHGEASLTSTIVGLAQNFVGSNNINLLDPNGQFGTRL 866
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 79/133 (59%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+E+HTDTTV F V M+ L AE +G K FKL T+L +M FD G + K+ +
Sbjct: 1027 DYEEHHTDTTVHFRVHMTEKNLADAEKEGFDKRFKLTTSLGTGNMVCFDLNGKIKKYASP 1086
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL+EF+ RLE+Y RK +L L + +L+NQARF+ +L + +++ +++A
Sbjct: 1087 EEILEEFFHKRLEFYGHRKQHLADELNRQFERLSNQARFVHMIITKELVVSGKRRPDIVA 1146
Query: 339 ELIKRKYDSDPVK 351
EL K+ P K
Sbjct: 1147 ELRSLKFKPFPKK 1159
>gi|302826295|ref|XP_002994651.1| hypothetical protein SELMODRAFT_138946 [Selaginella moellendorffii]
gi|300137231|gb|EFJ04283.1| hypothetical protein SELMODRAFT_138946 [Selaginella moellendorffii]
Length = 980
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 120/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KE KEYF ++ +H+ F + D D I +AFSKK + RK WL
Sbjct: 427 GLGTSTAKEGKEYFRDLVKHKKDFAWDNDEDGDSIELAFSKKKTEARKIWL--------- 477
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G +T + ITY++F+NKELILFS D RS+PS+ DGLKPG RK+LF
Sbjct: 478 ---RGYQPGTFLDQTQRVITYSDFINKELILFSLADLARSVPSMVDGLKPGQRKILFAAF 534
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + KVAQ +G V+EHSAYHHGEQSL STII +AQNFVGSNNIN+L PIGQFGT
Sbjct: 535 KRNFTSQAKVAQFSGYVSEHSAYHHGEQSLASTIIGMAQNFVGSNNINILAPIGQFGT 592
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 88/134 (65%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+E++TDT V F +++S +K+ +A +GL K FKL TT++ S+M FD+ G + K+DT
Sbjct: 760 DYREHNTDTRVHFEISLSEEKMAEALAEGLTKKFKLSTTISTSNMNLFDKDGHIRKYDTP 819
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
QIL++FY +RLE Y KRK+ L E LKL N+ RFI+ G++ + NRK+ E++
Sbjct: 820 EQILEDFYHIRLELYVKRKEVQVENLQYELLKLDNKVRFILGVVKGEIVVNNRKRAELLV 879
Query: 339 ELIKRKYDSDPVKS 352
EL + + P K+
Sbjct: 880 ELKTKGFTPFPKKA 893
>gi|323455286|gb|EGB11155.1| hypothetical protein AURANDRAFT_22331, partial [Aureococcus
anophagefferens]
Length = 1228
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/182 (57%), Positives = 128/182 (70%), Gaps = 18/182 (9%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAH----IRMAFSKKLVDERKTWLTTWME 66
GLGTST+KEAKEYF ++ H++ Y+ ++ A I MAFSKK V++RKTWL
Sbjct: 626 GLGTSTAKEAKEYFGELDTHQL--DYATLDESAREGDLIDMAFSKKRVEDRKTWL----- 678
Query: 67 ECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVL 126
R E G DY A++Y +FVNKELILFS DN+RSIPS+ DGLKP RKVL
Sbjct: 679 ---RNLEPGTFVDY----AVDAMSYGDFVNKELILFSVADNQRSIPSVVDGLKPSQRKVL 731
Query: 127 FTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQF 186
F C KR ++E+KVAQLAG V+EH+AYHHGE SL TI+ +AQ+FVGSNN+NLL P GQF
Sbjct: 732 FACFKRKLKKEIKVAQLAGYVSEHAAYHHGEMSLTGTIVGMAQDFVGSNNVNLLTPAGQF 791
Query: 187 GT 188
GT
Sbjct: 792 GT 793
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 82/133 (61%), Gaps = 4/133 (3%)
Query: 219 DYKEYHTDTTVKFVVTMSP-DKLHKAE--MDGLHKVFKLQTTLAISSMCAFDRYG-VLTK 274
D+KE HTDT V F VT++ + L AE + GL K FKL+ +LA S+M FD G V+ K
Sbjct: 957 DFKENHTDTRVSFTVTVTKGEDLDDAEAALGGLEKKFKLEGSLATSNMNFFDDTGLVIDK 1016
Query: 275 FDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKK 334
+D ++K FY VR+ YAKRK +L A L N+ RF++ GDL ++NRK+
Sbjct: 1017 YDAPFDVIKAFYKVRVATYAKRKAHLVKAKRARVSLLRNKVRFVLSVLSGDLVVQNRKRA 1076
Query: 335 EMIAELIKRKYDS 347
E++A+L+ YD+
Sbjct: 1077 ELLAQLVDDGYDA 1089
>gi|401411475|ref|XP_003885185.1| hypothetical protein NCLIV_055820 [Neospora caninum Liverpool]
gi|325119604|emb|CBZ55157.1| hypothetical protein NCLIV_055820 [Neospora caninum Liverpool]
Length = 1641
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 126/178 (70%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST +E KEYF+++ +H+I F +SG +D I MAF+K+ ++RK WL ++ E
Sbjct: 680 GLGTSTDREFKEYFNDLSKHQIDFVWSGQHDGELIDMAFNKRRAEDRKRWLQSYQE---- 735
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G D+ +++Y +FVNKELILFS D ERSIP L DG KPG RKVLF C+
Sbjct: 736 ----GTFVDH----NASSLSYADFVNKELILFSRYDTERSIPQLVDGWKPGQRKVLFACI 787
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N + E+KVAQLAG VAE SAYHHGE SL TI+ +AQ FVGSNN+N L+P+GQFG+
Sbjct: 788 KKNMKHEIKVAQLAGYVAEVSAYHHGEASLQQTIVTMAQRFVGSNNLNFLEPVGQFGS 845
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 82/133 (61%), Gaps = 2/133 (1%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY++ + + F V +S ++L + E +GL K FKL+T+L+ +++ FD +G + ++
Sbjct: 1009 DYRDCSSHEEIHFTVKVSEERLERPEREGLEKYFKLKTSLSTTNLTLFDPHGRVQRYANE 1068
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I+KEF +RL++Y +RK Y +L L+N+ RFI+ +G L I N++KK ++
Sbjct: 1069 LEIIKEFAPIRLDFYHRRKAYCLAMLEKSRRILSNRLRFILAVVNGQLIINNKRKKVLVE 1128
Query: 339 ELIKRKYDSDPVK 351
EL + Y DP+K
Sbjct: 1129 ELFSQGY--DPMK 1139
>gi|302812673|ref|XP_002988023.1| hypothetical protein SELMODRAFT_127267 [Selaginella moellendorffii]
gi|300144129|gb|EFJ10815.1| hypothetical protein SELMODRAFT_127267 [Selaginella moellendorffii]
Length = 1151
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 120/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KE KEYF ++ +H+ F + D D I +AFSKK + RK WL
Sbjct: 598 GLGTSTAKEGKEYFRDLVKHKKDFAWDNDEDGDSIELAFSKKKTEARKIWL--------- 648
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G +T + ITY++F+NKELILFS D RS+PS+ DGLKPG RK+LF
Sbjct: 649 ---RGYQPGTFLDQTQRVITYSDFINKELILFSLADLARSVPSMVDGLKPGQRKILFAAF 705
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + KVAQ +G V+EHSAYHHGEQSL STII +AQNFVGSNNIN+L PIGQFGT
Sbjct: 706 KRNFTSQAKVAQFSGYVSEHSAYHHGEQSLASTIIGMAQNFVGSNNINILAPIGQFGT 763
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 88/134 (65%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+E++TDT V F +++S +K+ +A +GL K FKL TT++ S+M FD+ G + K+DT
Sbjct: 931 DYREHNTDTRVHFEISLSEEKMAEALAEGLTKKFKLSTTISTSNMNLFDKDGHIRKYDTP 990
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
QIL++FY +RLE Y KRK+ L E LKL N+ RFI+ G++ + NRK+ E++
Sbjct: 991 EQILEDFYHIRLELYVKRKEVQVENLQYELLKLDNKVRFILGVVKGEIVVNNRKRAELLV 1050
Query: 339 ELIKRKYDSDPVKS 352
EL + + P K+
Sbjct: 1051 ELKTKGFTPFPKKA 1064
>gi|302782265|ref|XP_002972906.1| hypothetical protein SELMODRAFT_98330 [Selaginella moellendorffii]
gi|300159507|gb|EFJ26127.1| hypothetical protein SELMODRAFT_98330 [Selaginella moellendorffii]
Length = 1151
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 120/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KE KEYF ++ +H+ F + D D I +AFSKK + RK WL
Sbjct: 598 GLGTSTAKEGKEYFRDLVKHKKDFAWDNDEDGDSIELAFSKKKTEARKIWL--------- 648
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G +T + ITY++F+NKELILFS D RS+PS+ DGLKPG RK+LF
Sbjct: 649 ---RGYQPGTFLDQTQRVITYSDFINKELILFSLADLARSVPSMVDGLKPGQRKILFAAF 705
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + KVAQ +G V+EHSAYHHGEQSL STII +AQNFVGSNNIN+L PIGQFGT
Sbjct: 706 KRNFTSQAKVAQFSGYVSEHSAYHHGEQSLASTIIGMAQNFVGSNNINILAPIGQFGT 763
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 88/134 (65%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+E++TDT V F +++S +K+ +A +GL K FKL TT++ S+M FD+ G + K+DT
Sbjct: 931 DYREHNTDTRVHFEISLSEEKMAEALAEGLTKKFKLSTTISTSNMNLFDKDGHIRKYDTP 990
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
QIL++FY +RLE Y KRK+ L E LKL N+ RFI+ G++ + NRK+ E++
Sbjct: 991 EQILEDFYHIRLELYVKRKEVQVENLQYELLKLDNKVRFILGVVKGEIVVNNRKRAELLV 1050
Query: 339 ELIKRKYDSDPVKS 352
EL + + P K+
Sbjct: 1051 ELKTKGFTPFPKKA 1064
>gi|324507090|gb|ADY43013.1| DNA topoisomerase 2 [Ascaris suum]
Length = 625
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/196 (50%), Positives = 132/196 (67%), Gaps = 10/196 (5%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+++EA+EYF+ M+RHR+ F Y G+ DD IR+AF K D+RK W+ E
Sbjct: 79 GLGTSSAEEAREYFAEMDRHRVQFVYGGEEDDESIRLAFDKSRADDRKIWIAHTSENTDS 138
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
RK + + TY+EF+N+ELI FS +D RS+P+ DGLKP RKVL+T +
Sbjct: 139 RKRENLNQR----------TYSEFINEELIDFSRLDIRRSVPNAIDGLKPSQRKVLYTLM 188
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+R ++ EV+V QLAG+VA AYHHGE+ L++TI+ LAQ+FVGSNN+NLLQPIGQFGT L
Sbjct: 189 QRFEKSEVRVVQLAGAVAHSCAYHHGEEPLINTIVRLAQDFVGSNNLNLLQPIGQFGTRL 248
Query: 191 FIFESTNLSGAVVNAL 206
E + + AL
Sbjct: 249 IGGEDCASARYIYTAL 264
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 74/138 (53%), Gaps = 5/138 (3%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDG-----LHKVFKLQTTLAISSMCAFDRYGVLTK 274
YKE HT+ V+F++ + + +G LHK KL T L SSM FD L +
Sbjct: 412 YKELHTENAVRFLLELPKGSGIWSSANGGRKHALHKTLKLDTVLGTSSMVLFDENNSLRR 471
Query: 275 FDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKK 334
F +I + F+ VR + Y +R+D+ GVL A+ NQ RF+ + ++ IE + +
Sbjct: 472 FTRIEEIFELFFEVRRQKYIERRDHQIGVLDAKLRFYENQCRFVEAVLNKEITIEGKSRT 531
Query: 335 EMIAELIKRKYDSDPVKS 352
++ + L +R ++ +P+K+
Sbjct: 532 DIESTLRQRHFEPNPLKA 549
>gi|221487518|gb|EEE25750.1| DNA topoisomerase II, putative [Toxoplasma gondii GT1]
Length = 1688
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 128/178 (71%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST +E KEYF+++++H+I F +SG +D I MAF+KK ++RK WL ++ E
Sbjct: 709 GLGTSTDREFKEYFNDLDKHQIDFVWSGQHDGELIDMAFNKKRAEDRKRWLQSYQE---- 764
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G D+ +++Y++FVNKELILFS D ERSIP L DG KPG RKVLF C+
Sbjct: 765 ----GTFVDH----NASSLSYSDFVNKELILFSRYDTERSIPQLVDGWKPGQRKVLFACI 816
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N + E+KVAQLAG V+E SAYHHGE SL TI+ +AQ FVGSNN+N L+P+GQFG+
Sbjct: 817 KKNMKHELKVAQLAGYVSEVSAYHHGEASLQQTIVTMAQRFVGSNNLNFLEPVGQFGS 874
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 83/133 (62%), Gaps = 2/133 (1%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY++ + + F V + +++ + E +GL K FKL+++L+I+++ FD +G + ++
Sbjct: 1038 DYRDCSSHEEIHFTVKVGEERVERPEREGLEKYFKLKSSLSITNLTLFDPHGRVQRYANE 1097
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I+KEF +RLE+Y +RK Y +L L+N+ RFI+ +G+L I N++KK +I
Sbjct: 1098 LEIIKEFAPIRLEFYHRRKAYCLAMLEKARRILSNRLRFILAVVNGELIINNKRKKALIE 1157
Query: 339 ELIKRKYDSDPVK 351
EL + Y DP+K
Sbjct: 1158 ELFSQGY--DPMK 1168
>gi|237830295|ref|XP_002364445.1| DNA topoisomerase II, putative [Toxoplasma gondii ME49]
gi|211962109|gb|EEA97304.1| DNA topoisomerase II, putative [Toxoplasma gondii ME49]
gi|221507315|gb|EEE32919.1| DNA topoisomerase II, putative [Toxoplasma gondii VEG]
Length = 1687
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 128/178 (71%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST +E KEYF+++++H+I F +SG +D I MAF+KK ++RK WL ++ E
Sbjct: 709 GLGTSTDREFKEYFNDLDKHQIDFVWSGQHDGELIDMAFNKKRAEDRKRWLQSYQE---- 764
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G D+ +++Y++FVNKELILFS D ERSIP L DG KPG RKVLF C+
Sbjct: 765 ----GTFVDH----NASSLSYSDFVNKELILFSRYDTERSIPQLVDGWKPGQRKVLFACI 816
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N + E+KVAQLAG V+E SAYHHGE SL TI+ +AQ FVGSNN+N L+P+GQFG+
Sbjct: 817 KKNMKHELKVAQLAGYVSEVSAYHHGEASLQQTIVTMAQRFVGSNNLNFLEPVGQFGS 874
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 83/133 (62%), Gaps = 2/133 (1%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY++ + + F V + +++ + E +GL K FKL+++L+I+++ FD +G + ++
Sbjct: 1038 DYRDCSSHEEIHFTVKVGEERVERPEREGLEKYFKLKSSLSITNLTLFDPHGRVQRYANE 1097
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I+KEF +RLE+Y +RK Y +L L+N+ RFI+ +G+L I N++KK +I
Sbjct: 1098 LEIIKEFAPIRLEFYHRRKAYCLAMLEKARRILSNRLRFILAVVNGELIINNKRKKALIE 1157
Query: 339 ELIKRKYDSDPVK 351
EL + Y DP+K
Sbjct: 1158 ELFSQGY--DPMK 1168
>gi|449015438|dbj|BAM78840.1| topoisomerase II [Cyanidioschyzon merolae strain 10D]
Length = 1576
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/180 (57%), Positives = 121/180 (67%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+ EA+ YFSN+ RH+I F + D I +AFSK V ERK WL
Sbjct: 612 GLGTSTAAEARTYFSNLSRHQIPFVWQNHADYESIELAFSKHKVQERKDWLAA------- 664
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
++G D+ +TY FV+KEL+LFS DN RSIP L DGLKP RKVLF C
Sbjct: 665 -HKLGTYFDH----AADTLTYANFVHKELVLFSLADNARSIPCLIDGLKPSQRKVLFACF 719
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR +E+KVAQLAG V+EH+AYHHGE SLM+TII LAQNFVGSNN+NLL P GQFGT L
Sbjct: 720 KRKLYQEIKVAQLAGYVSEHAAYHHGEASLMATIIGLAQNFVGSNNLNLLVPAGQFGTRL 779
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 1/126 (0%)
Query: 225 TDTTVKFVVTMSPD-KLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILK 283
T+T V F + + +L +A+ L K L +L+ ++M FD G + ++DT QIL
Sbjct: 975 TETLVDFTLHWANGAELEQADAAALFKKLHLSGSLSTANMVLFDSNGRIRRYDTIQQILV 1034
Query: 284 EFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKR 343
EFY +RLE Y KR+ ++ L E ++L N+ RFI+ + + I NRK+ E++ EL +R
Sbjct: 1035 EFYQMRLELYRKRQAWIVRALERELIRLDNKVRFIMAVIENQIIIANRKRSELLDELHQR 1094
Query: 344 KYDSDP 349
+ P
Sbjct: 1095 NFARLP 1100
>gi|325588262|gb|ADZ31963.1| alpha DNA topoisomerase II [Trypanosoma rangeli]
Length = 1455
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/208 (51%), Positives = 137/208 (65%), Gaps = 19/208 (9%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +KE +EYF N++RHR+ F +D+A I MAF+K V+ERK W+T +
Sbjct: 593 GLGTSGAKEGREYFENIDRHRLDFVREDASDEARIVMAFAKDKVEERKHWITQF------ 646
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R + E Y T + Y+EFV+KELILFS D ERSIPS+ DGLKPG RK++F
Sbjct: 647 RANTNVNESMNYNVQT--VRYSEFVDKELILFSVADCERSIPSMIDGLKPGQRKIIFASF 704
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R +KV QLAG V+EH+AYHHGEQSL+ TI+ LAQ+FVG+NN+ LLQ GQFGT L
Sbjct: 705 KRNLTRSIKVVQLAGYVSEHAAYHHGEQSLVQTIVGLAQDFVGANNVPLLQQDGQFGTRL 764
Query: 191 ----------FIFES-TNLSGAVVNALD 207
+IF TNL+ + +A D
Sbjct: 765 QGGKDHAAGRYIFTRLTNLARYIFHASD 792
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDG-LHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
Y+E++TD T+ F V + P+ L + G + + +L+ + +++ AFDR G +TK+
Sbjct: 921 YREHNTDVTIDFEVFVHPEVLQQWVAQGCVEEKLQLREYIHATNIIAFDREGQITKYLDA 980
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+LK FY VRLEYY KR+D+L G L + A KL N RF+ E DG L + R+K+E++
Sbjct: 981 EAVLKAFYLVRLEYYVKRRDFLIGDLRSVASKLENMVRFVTEVVDGHLVVTRRRKRELLE 1040
Query: 339 ELIKRKYDSDP------VKSWKMKQNKENAL 363
EL +R Y P + S ++Q E A+
Sbjct: 1041 ELRQRGYTPFPPHQKKNMSSTTIQQEDEEAV 1071
>gi|402466606|gb|EJW02059.1| hypothetical protein EDEG_03483 [Edhazardia aedis USNM 41457]
Length = 1226
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 122/180 (67%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS +AK YFSN+ +H F +D + +AF+KK D+RK+WL W
Sbjct: 633 GLGTSTSADAKFYFSNLPKHVKNFDELTASDKELLNLAFNKKKADQRKSWLKNWAP---- 688
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G+ D + I+ ++FVNKELILFS DN RSIP L DG KPG RKVLF+C
Sbjct: 689 ----GVFLD----NSVPQISISDFVNKELILFSMADNIRSIPCLVDGFKPGQRKVLFSCF 740
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR +EVKVAQLAG V+EHSAYHHGE SL TIINLAQNFVGSNNINLL P GQFGT L
Sbjct: 741 KRKLTQEVKVAQLAGYVSEHSAYHHGEASLCGTIINLAQNFVGSNNINLLSPNGQFGTRL 800
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 79/128 (61%), Gaps = 4/128 (3%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D+KEYHT+ TV F + + + H + + K KL TT++++++ FD G + K+ +
Sbjct: 1022 DFKEYHTENTVYFKLLGTTNITH----NNIEKKLKLSTTISLNNLVCFDSKGFIKKYSSP 1077
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
++I+ EFY +RL++Y+KRK+YL L + KL N+ RFI E + L I RKK ++
Sbjct: 1078 SEIINEFYHIRLQFYSKRKEYLLKCLYEDLKKLENKVRFIKEIIEETLIIRKRKKCDIEQ 1137
Query: 339 ELIKRKYD 346
+L RKYD
Sbjct: 1138 DLENRKYD 1145
>gi|290995679|ref|XP_002680410.1| DNA topoisomerase II [Naegleria gruberi]
gi|284094031|gb|EFC47666.1| DNA topoisomerase II [Naegleria gruberi]
Length = 1135
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/181 (55%), Positives = 130/181 (71%), Gaps = 15/181 (8%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGT++SKEAK+YFSN++RH I +Y D+ + +I +AFSK L + RK+W+ +
Sbjct: 603 GLGTNSSKEAKDYFSNLKRHVIALQYD-DDSEPNIELAFSKDLANARKSWVASL------ 655
Query: 71 RKEMGIGEDYLYTKTTKA-ITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
+D + TT +T T+F+N ELILFSN +N RSIPS+ DGLKP RK+LF C
Sbjct: 656 -------KDGTFLDTTNGKVTITDFINNELILFSNQNNIRSIPSIVDGLKPSQRKILFAC 708
Query: 130 LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTF 189
LKR+ + E+KVAQLAG V+EHSAYHHGEQSL TI ++AQ+FVG+NNI LL P GQFGT
Sbjct: 709 LKRDLKDEIKVAQLAGYVSEHSAYHHGEQSLYGTITSMAQDFVGANNIPLLYPSGQFGTR 768
Query: 190 L 190
L
Sbjct: 769 L 769
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 222 EYHTDTTVKFVVTMS-PDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQ 280
E +T+ +V F + ++ PD+ ++++ K KL+ + ++S+M F + +F N
Sbjct: 939 ERNTENSVGFTIAINDPDEFSESQL----KKLKLEKSFSLSNMTVFSENFDIIQFSNVND 994
Query: 281 ILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFI--VEKCDGDLRIENRKKKEMIA 338
I+K+FY VRL YY +RK +L L + L+N+ +F+ + + +L + KKE I
Sbjct: 995 IIKQFYLVRLSYYHQRKSHLMKQLEKQIRILSNKVKFLNFITSNESNLNTFIKTKKENIP 1054
Query: 339 ELI 341
+
Sbjct: 1055 SFL 1057
>gi|183987592|gb|ACC65786.1| topoisomerase II [Pleurotus flabellatus]
Length = 701
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 125/178 (70%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ +A+EYFS M +H I F D + I +AFSKK D+RK WL R
Sbjct: 468 GLGTSSDADAREYFSKMSKHMIPFATMEDEERPLIDLAFSKKKADDRKDWL--------R 519
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ + I YT+F+NKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 520 QFKPGTYLDH----NLEEIPYTDFINKELILFSMADNIRSIPSVADGLKPGQRKVIWGCF 575
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN ++E+KVAQL G ++EH+AYHHGE SL +TIINLAQN+VGSNNINLL P GQ+GT
Sbjct: 576 KRNLKKEIKVAQLVGYISEHAAYHHGEASLAATIINLAQNYVGSNNINLLMPNGQYGT 633
>gi|321251923|ref|XP_003192225.1| DNA topoisomerase II [Cryptococcus gattii WM276]
gi|317458693|gb|ADV20438.1| DNA topoisomerase II, putative [Cryptococcus gattii WM276]
Length = 1377
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/180 (57%), Positives = 127/180 (70%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS +AK+YF ++++HR+ F+ D I MAF+KK D+RK WL R
Sbjct: 698 GLGTSTSADAKKYFGDLDKHRLAFETMQPEDRQLIDMAFNKKKADDRKEWL--------R 749
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +++ ++FVNKELILFS DN RSIPS+ DGLKPG RKVLF C
Sbjct: 750 QFKPGTYLDH----DIQSLPISDFVNKELILFSMADNIRSIPSVADGLKPGQRKVLFGCF 805
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +E+KVAQLAG V+E +AYHHGE SL STI+ LAQNFVGSNNINLL P GQFGT L
Sbjct: 806 KRNLTKEIKVAQLAGYVSEKTAYHHGEASLTSTIVGLAQNFVGSNNINLLDPNGQFGTRL 865
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 79/133 (59%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+E+HTDTTV F V M+ L AE +G K FKL T+L +M FD G + K+ +
Sbjct: 1026 DYEEHHTDTTVHFRVHMTEKNLADAEKEGFDKRFKLTTSLGTGNMVCFDLNGKIKKYASP 1085
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL+EF+ RLE+Y RK +L L + +L+NQARF+ +L + +++ +++A
Sbjct: 1086 EEILEEFFHKRLEFYGHRKQHLADELNRQFERLSNQARFVHMIITKELVVSGKRRPDIVA 1145
Query: 339 ELIKRKYDSDPVK 351
EL K+ P K
Sbjct: 1146 ELRSLKFRPFPKK 1158
>gi|86438844|emb|CAJ44361.1| putative DNA topoisomerase II [Malus x domestica]
Length = 1467
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 127/178 (71%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKE ++YF N+ +H+ F + + D I +AFSKK ++ERK WL R
Sbjct: 577 GLGTSTSKEGRDYFQNLVQHKKDFIWIDERDGEAIELAFSKKKIEERKNWL--------R 628
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G+ D + K I Y++FV+KELI FS D +RSIPS+ DGLKPG RK+LF+
Sbjct: 629 QFEPGVHLD----QKEKLIKYSDFVHKELIQFSMADLQRSIPSMVDGLKPGQRKILFSSF 684
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN +E KVAQ +G V+EHSAYHHGEQSL STII +AQ+FVGSNNINLLQP GQFGT
Sbjct: 685 KRNFVKEAKVAQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLQPNGQFGT 742
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 85/130 (65%), Gaps = 1/130 (0%)
Query: 224 HTD-TTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQIL 282
H+D +TV +V + +KL A+ +GL K FKL T+++ S+M FDR GV+ K+DT QIL
Sbjct: 913 HSDHSTVDIIVHLREEKLMAAKQEGLLKKFKLTTSISTSNMHLFDRKGVIKKYDTPEQIL 972
Query: 283 KEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIK 342
++F+ +RLE+Y KRK L L E LKL N+ RFI+ +G++ + NRK+ ++ EL +
Sbjct: 973 EDFFHLRLEFYEKRKKVLLEDLELELLKLENKVRFILGVVNGEIIVSNRKRADLFLELQQ 1032
Query: 343 RKYDSDPVKS 352
+ + P K+
Sbjct: 1033 KGFTPFPKKT 1042
>gi|412986492|emb|CCO14918.1| DNA topoisomerase II [Bathycoccus prasinos]
Length = 1444
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 124/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF+ +E HR F + D D I M+FSKK V++RK WL+ + E
Sbjct: 637 GLGTSTAKEAKEYFAAIELHRKTFCWESDGDGDLIDMSFSKKRVEDRKRWLSAYEEGT-- 694
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
++ + + Y EF+NKELILFS D RSIPS DG KP RKV+F+C
Sbjct: 695 ----------FLDQSGETVRYDEFINKELILFSLADLMRSIPSAIDGFKPSQRKVMFSCF 744
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR + ++KVAQL+G V+EHSAYHHGE SL STI+NLAQ+FVG+NNINLL P GQFGT L
Sbjct: 745 KRKLKSDIKVAQLSGYVSEHSAYHHGEASLASTIVNLAQDFVGTNNINLLVPSGQFGTRL 804
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 84/131 (64%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTDT+V FV+TM P L KAE +G+ K FKL + ++ S+M AF+ + ++TK+++
Sbjct: 968 DYKEYHTDTSVHFVITMPPANLAKAEEEGIVKKFKLASKISCSNMHAFNEHSIITKYESA 1027
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I+K F +RL+ Y +R+ L V +E +L N+ RFI+ +G L + +KK E++
Sbjct: 1028 EDIMKSFVPLRLKAYEERRQMLIKVAESELKRLANKTRFILAVVEGSLVVNRKKKAELVE 1087
Query: 339 ELIKRKYDSDP 349
EL YD P
Sbjct: 1088 ELEMMMYDKLP 1098
>gi|145353138|ref|XP_001420882.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581118|gb|ABO99175.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1292
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 104/180 (57%), Positives = 124/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+ EAKEYF++++ HR F + D D I M+FSKK V +RK WLT +
Sbjct: 610 GLGTSTANEAKEYFASLDHHRKSFVWQSDGDGDLIDMSFSKKRVVDRKAWLTAY------ 663
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D T + I Y EF+NKELILFS D RSIPS+ DG KP RKVLF+C
Sbjct: 664 --EPGTFLDM----TGEDIRYDEFINKELILFSRADLLRSIPSMVDGFKPSQRKVLFSCF 717
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR + ++KVAQL+G V+EHSAYHHGE SL TI+NLAQ+FVGSNNINLL P GQFGT L
Sbjct: 718 KRKLKSDIKVAQLSGYVSEHSAYHHGEASLAMTIVNLAQDFVGSNNINLLVPSGQFGTRL 777
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 86/131 (65%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTD+TV FV+TM P+ L A+ G+ K FKL T L I++M F+ GV+TK+ +
Sbjct: 942 DYKEYHTDSTVHFVITMPPENLAAAQASGIEKKFKLSTKLNITNMHLFNEQGVITKYSSP 1001
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ F +RL+ Y++R++ L + ++ +L+N+ RFI+ DG L + +KK+E+IA
Sbjct: 1002 VAILEAFVPLRLKAYSQRREMLIRLAESQLKRLSNKMRFILAVVDGSLVVNRKKKQELIA 1061
Query: 339 ELIKRKYDSDP 349
EL YD P
Sbjct: 1062 ELEALCYDRLP 1072
>gi|308810347|ref|XP_003082482.1| putative DNA topoisomerase II (ISS) [Ostreococcus tauri]
gi|116060951|emb|CAL56339.1| putative DNA topoisomerase II (ISS) [Ostreococcus tauri]
Length = 1099
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/180 (57%), Positives = 125/180 (69%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+ EAKEYF++++ HR F + D D I M+FSKK V++RK WL +
Sbjct: 634 GLGTSTANEAKEYFASLDHHRKNFIWESDGDGDLIDMSFSKKRVEDRKAWLNAY------ 687
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D + +AI Y EF+NKELILFS D RSIPS+ DG KP RKVLF+C
Sbjct: 688 --EPGTFLDM----SGEAIRYDEFINKELILFSRADLLRSIPSMVDGFKPSQRKVLFSCF 741
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR + ++KVAQL+G V+EHSAYHHGE SL TI+NLAQ+FVGSNNINLL P GQFGT L
Sbjct: 742 KRKLKSDIKVAQLSGYVSEHSAYHHGEASLAMTIVNLAQDFVGSNNINLLVPSGQFGTRL 801
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 73/110 (66%), Gaps = 2/110 (1%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAE--MDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
DYKEYHTDTTV FV+TM P+ L A+ G+ K FKL T ++IS+M F+ +G +TK+
Sbjct: 966 DYKEYHTDTTVHFVITMPPENLAAAQSAPGGIEKKFKLSTKVSISNMHLFNEHGAITKYA 1025
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDL 326
+ +L+ F +RL+ YA+R+D L + ++ +L+N+ RFI+ DG L
Sbjct: 1026 SPIDVLQAFIPLRLKAYAQRRDMLIRLAESQLKRLSNKMRFILAVVDGSL 1075
>gi|83367164|gb|ABC17641.1| DNA topoisomerase IIalpha [Trypanosoma brucei]
Length = 1455
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 127/180 (70%), Gaps = 8/180 (4%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +KE +EYF N++RHR+ F Y DD I MAF+K VDERK W+T +
Sbjct: 593 GLGTSGAKEGREYFENIDRHRLNFVYEDRKDDDDIVMAFAKDKVDERKRWITEF------ 646
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ I E Y + ++Y+EFV+KELILFS D ERSIPS+ DGLKPG RK++F+
Sbjct: 647 KANTNINESMNYN--VRNVSYSEFVHKELILFSVADCERSIPSVVDGLKPGQRKIMFSAF 704
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R +KVAQLAG V+EH+AYHHGEQSL+ TI+ LAQ++VG+NN+ LL GQFGT L
Sbjct: 705 KRNLVRSLKVAQLAGYVSEHAAYHHGEQSLVQTIVGLAQDYVGANNVPLLYRDGQFGTRL 764
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDG-LHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
Y+E++TD TV F V + P+ L + G + + +L+ + +++ AFDR G +TK+
Sbjct: 921 YREHNTDVTVDFEVFIHPEVLRQWVAQGCVEERLQLREYIHATNIIAFDREGKITKYLDA 980
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+LKEFY VRLEYYA+R+++L L ALKL N RF+ E DG + R K+++
Sbjct: 981 ESVLKEFYLVRLEYYARRREFLLEQLQRAALKLENMVRFVNEVIDGTFIVTRRSMKDVLK 1040
Query: 339 ELIKRKYDSDPVKSWK 354
+L +R Y P + K
Sbjct: 1041 DLKQRGYTPFPPQQKK 1056
>gi|261335183|emb|CBH18177.1| DNA topoisomerase II, putative [Trypanosoma brucei gambiense
DAL972]
Length = 1455
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 127/180 (70%), Gaps = 8/180 (4%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +KE +EYF N++RHR+ F Y DD I MAF+K VDERK W+T +
Sbjct: 593 GLGTSGAKEGREYFENIDRHRLNFVYEDRKDDDDIVMAFAKDKVDERKRWITEF------ 646
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ I E Y + ++Y+EFV+KELILFS D ERSIPS+ DGLKPG RK++F+
Sbjct: 647 KANTNINESMNYN--VRNVSYSEFVHKELILFSVADCERSIPSVVDGLKPGQRKIMFSAF 704
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R +KVAQLAG V+EH+AYHHGEQSL+ TI+ LAQ++VG+NN+ LL GQFGT L
Sbjct: 705 KRNLVRSLKVAQLAGYVSEHAAYHHGEQSLVQTIVGLAQDYVGANNVPLLYRDGQFGTRL 764
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDG-LHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
Y+E++TD TV F V + P+ L + G + + +L+ + +++ AFDR G +TK+
Sbjct: 921 YREHNTDVTVDFEVFIHPEVLRQWVAQGCVEERLQLREYIHATNIIAFDREGKITKYLDA 980
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+LKEFY VRLEYYA+R+++L L ALKL N RF+ E DG + R K+++
Sbjct: 981 ESVLKEFYLVRLEYYARRREFLLEQLQRAALKLENMVRFVNEVIDGTFIVTRRSMKDVLK 1040
Query: 339 ELIKRKYDSDPVKSWK 354
+L +R Y P + K
Sbjct: 1041 DLKQRGYTPFPPQQKK 1056
>gi|183987582|gb|ACC65781.1| topoisomerase II [Pleurotus salmoneostramineus]
Length = 552
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 125/178 (70%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ +A+EYFS M +H I F D + I +AFSKK D+RK WL R
Sbjct: 319 GLGTSSDADAREYFSKMSKHMIPFATMEDEERPLIDLAFSKKKADDRKDWL--------R 370
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ + I YT+F+NKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 371 QFKPGTYLDH----NLEEIPYTDFINKELILFSMADNIRSIPSVADGLKPGQRKVIWGCF 426
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN ++E+KVAQL G ++EH+AYHHGE SL +TIINLAQN+VGSNNINLL P GQ+GT
Sbjct: 427 KRNLKKEIKVAQLVGYISEHAAYHHGEASLAATIINLAQNYVGSNNINLLMPNGQYGT 484
>gi|730968|sp|P41001.1|TOP2_PLAFK RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
II
Length = 1398
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 126/179 (70%), Gaps = 13/179 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST +E K+YFS+++ H+I+F ++GD D I MAFSKK +++RK WL ++
Sbjct: 651 GLGTSTDREFKQYFSDIKNHKIMFLWTGDRDGDSIDMAFSKKRIEDRKLWLQNFI----- 705
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+G D+ K ++Y +FVNKELI +S D ERSIP++ DG KPG RKVL+ C
Sbjct: 706 ---LGSYVDH----KEKDLSYYDFVNKELIYYSRYDTERSIPNIMDGWKPGQRKVLYGCF 758
Query: 131 KRNDRREVKVAQLAGSVAEHSAY-HHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN R E KVAQL G +AEHSAY HHGE SL TIIN+AQ FVGSNNIN L+P GQFG+
Sbjct: 759 KRNLRNECKVAQLVGYIAEHSAYHHHGESSLQQTIINMAQTFVGSNNINFLEPCGQFGS 817
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 74/129 (57%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY + + + F + M P KL KAE +GL KVFKL++TL ++M FD L ++ T
Sbjct: 978 DYIDNSSHEDICFTIKMDPAKLQKAEEEGLEKVFKLKSTLTTTNMTLFDPNLKLQRYSTE 1037
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILKEF RL+ Y RK YL L E ++N+ +FI+ + +L + +KKK ++
Sbjct: 1038 LDILKEFCYQRLKAYENRKSYLISKLEKEKRIISNKTKFILAIVNNELIVNKKKKKVLVE 1097
Query: 339 ELIKRKYDS 347
EL ++ YD
Sbjct: 1098 ELYRKGYDP 1106
>gi|440792851|gb|ELR14059.1| DNA gyrase/topoisomerase IV, A subunit [Acanthamoeba castellanii
str. Neff]
Length = 1559
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/180 (54%), Positives = 128/180 (71%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+++EAKEYFS ++RH+I F + GD D I MAFSKK V++RKTW++ +
Sbjct: 630 GLGTSSAQEAKEYFSELQRHKIDFAWGGDEDGDAIDMAFSKKRVEDRKTWISKF------ 683
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D + + Y++F++KELI FS D RSIPSL DGLKPG RK+L+TCL
Sbjct: 684 --EPGTFLD----QDVDELPYSDFIHKELIHFSIADCARSIPSLVDGLKPGQRKILYTCL 737
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+N + E++VAQL+GSV+ HSAYHHGE+SL I+ +A NFVGSNNINLL P G FG+ L
Sbjct: 738 SKNIKEEIRVAQLSGSVSLHSAYHHGEESLNKAIVAMAHNFVGSNNINLLFPAGSFGSRL 797
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 79/128 (61%), Gaps = 1/128 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY E+HTD+ V FV+T++ D+ + + K FKL +++++M FDR G + ++ +
Sbjct: 962 DYTEHHTDSKVHFVITLT-DEASVFDESEIEKQFKLSKYISMNNMHLFDRNGHIARYGSC 1020
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+L+EFY VRLE+Y KRK +L G L + KL NQ RFI+ ++ + NRKK E++
Sbjct: 1021 MSVLQEFYDVRLEFYDKRKAHLIGTLNKQLSKLDNQVRFILGVIKKEIVVNNRKKVELLK 1080
Query: 339 ELIKRKYD 346
+L +D
Sbjct: 1081 QLEDMGFD 1088
>gi|392572043|gb|EIW65215.1| type II DNA topoisomerase [Trametes versicolor FP-101664 SS1]
Length = 1536
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 126/178 (70%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++A++YF +M+RH I F D D I +AFSKK D+RK WL R
Sbjct: 686 GLGTSKDEDARDYFRDMKRHMIPFSTQQDGDRELIELAFSKKKADDRKEWL--------R 737
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ T + I +F+N+ELILFS DN RSIPS+ DGLKPG RKV+++C
Sbjct: 738 QFKPGTYLDH----TQREIPLKDFINRELILFSMADNIRSIPSVADGLKPGQRKVIWSCF 793
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN +RE+KVAQL G V+E SAYHHGE SLM+TIINLAQ++VGSNN+NLL P GQFGT
Sbjct: 794 KRNLKREIKVAQLVGYVSETSAYHHGEASLMATIINLAQDYVGSNNMNLLLPNGQFGT 851
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 81/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYH + V FVVTM+ + +AE G H+ FKL T ++ ++M FD + K+
Sbjct: 1012 DYKEYHNNMNVHFVVTMTEKGMEQAEKQGFHEFFKLTTKVSTANMVCFDFDSKIKKYSAA 1071
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I+++FY RL YY KRKD+L L + +L NQARF+ D +L + NRKK +++A
Sbjct: 1072 EEIIEDFYPRRLAYYQKRKDFLANELQTQLDRLNNQARFVKMIIDKELIVNNRKKADIVA 1131
Query: 339 ELIKRKYDSDP 349
EL K+++ P
Sbjct: 1132 ELRKKQFRPFP 1142
>gi|224106109|ref|XP_002314046.1| predicted protein [Populus trichocarpa]
gi|222850454|gb|EEE88001.1| predicted protein [Populus trichocarpa]
Length = 1482
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 124/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKE K+YF N+ +H+ F + + D I +AFSKK ++ RK WL R
Sbjct: 610 GLGTSTSKEGKDYFKNLHKHKKDFLWMDELDGDAIELAFSKKKIEARKNWL--------R 661
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D+ K I Y++F+NKELILFS D +RSIPS+ DGLKPG RK+LF
Sbjct: 662 QHEPGTHLDH----NQKIIKYSDFINKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 717
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN +E KV+Q +G V+EHSAYHHGEQSL TII +AQ+FVGSNNINLLQP GQFGT
Sbjct: 718 KRNFVKEAKVSQFSGYVSEHSAYHHGEQSLAGTIIGMAQDFVGSNNINLLQPNGQFGT 775
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 83/134 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D+++Y D V F V +S + + A+ +GL K FKL TT++ S+M FD GV+ K+D
Sbjct: 949 DFRKYGDDAAVHFEVQLSEENMLVAKQEGLLKKFKLTTTISTSNMHLFDSAGVIKKYDNP 1008
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
QIL+ F+ +RLEYY RK L L E LKL N+ RFI+ G++ + NRK+ +++
Sbjct: 1009 EQILENFFHLRLEYYETRKKVLLENLEFELLKLENKVRFILGVVRGEIIVNNRKRADLLL 1068
Query: 339 ELIKRKYDSDPVKS 352
EL ++ ++ P KS
Sbjct: 1069 ELHQKGFNPIPKKS 1082
>gi|225450069|ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
Length = 1489
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 126/178 (70%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKE KEYF ++ +H+ F + + D I +AFSKK ++ERK WL R
Sbjct: 610 GLGTSTSKEGKEYFKDLGKHKKDFMWVDEKDGDAIELAFSKKKIEERKNWL--------R 661
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G YL K K I Y++FVNKELILFS D +RSIPS+ DGLKPG RK+LF
Sbjct: 662 QFQPGT---YLDQKE-KLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 717
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN +E K+AQ +G V+EHSAYHHGEQSL STII +AQ+FVGSNNINLL P GQFGT
Sbjct: 718 KRNFIKEAKIAQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGT 775
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 85/134 (63%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE++ DTTV F V MS + L A+ +GL + FKL T ++ S+M FD G + K++T
Sbjct: 944 DYKEHNDDTTVHFEVIMSEENLLMAKQEGLLQKFKLTTKISTSNMHLFDSNGTIKKYETP 1003
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
QIL+EF+ +RLE+Y KRK L L E LKL N+ RFI+ G++ + NRK+ ++
Sbjct: 1004 EQILEEFFHLRLEFYEKRKRVLLDNLELELLKLENKVRFILGVVRGEIIVSNRKRADLFH 1063
Query: 339 ELIKRKYDSDPVKS 352
EL ++ + P KS
Sbjct: 1064 ELHQKGFTPFPKKS 1077
>gi|123484430|ref|XP_001324264.1| topoisomerase II [Trichomonas vaginalis G3]
gi|121907144|gb|EAY12041.1| topoisomerase II [Trichomonas vaginalis G3]
Length = 1458
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 141/217 (64%), Gaps = 12/217 (5%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GL TST++EAKEYFSN+ +H+ +F Y+ +ND+ I +AF+KK D+RK WL
Sbjct: 603 GLATSTAEEAKEYFSNISKHKKVFIYTNENDEERINLAFAKKRADDRKNWLA-------- 654
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
++ E YL TK T I Y++FV+KELILFS+ N R+IPS DG KPG RK+L+ CL
Sbjct: 655 --QLDANETYLGTKDTH-IKYSDFVDKELILFSSYANYRAIPSSIDGWKPGQRKILWVCL 711
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
K N + ++KVAQL+G V+E +AYHHGE SL TII + Q+FVGSNNIN+ QPIG GT L
Sbjct: 712 KNNIKNDLKVAQLSGKVSEQAAYHHGEASLNETIIGMCQDFVGSNNINVFQPIGMLGTRL 771
Query: 191 FIFESTNLSGAVVNALD-FGSGGWRFESNDYKEYHTD 226
E + V AL+ + E +D Y+TD
Sbjct: 772 AGGEDSGSPRYVYTALEKITRTIFMKEDDDLLTYNTD 808
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 79/129 (61%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
++++EYHT+ +V F++T+ ++ + E GL + FKL++++ ++M F+ + +F++
Sbjct: 981 SEFREYHTNVSVHFIITVDDSQMREIESVGLREFFKLKSSITATNMTLFNAQNKIVQFNS 1040
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
I+ ++Y VR++YY +R YL L + KL+NQARFI E G +++ + ++
Sbjct: 1041 PLDIINDYYPVRMKYYEERHRYLIDALQLQYKKLSNQARFIREVIAGIIKVNGVPRATIL 1100
Query: 338 AELIKRKYD 346
A L + YD
Sbjct: 1101 AALERGNYD 1109
>gi|74025306|ref|XP_829219.1| DNA topoisomerase II [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70834605|gb|EAN80107.1| DNA topoisomerase II, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 1424
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 127/180 (70%), Gaps = 8/180 (4%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +KE +EYF N++RHR+ F Y DD I MAF+K VDERK W+T +
Sbjct: 593 GLGTSGAKEGREYFENIDRHRLNFVYEDRKDDDDIVMAFAKDKVDERKRWITEF------ 646
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ I E Y + ++Y+EFV+KELILFS D ERSIPS+ DGLKPG RK++F+
Sbjct: 647 KANTNINESMNYN--VRNVSYSEFVHKELILFSVADCERSIPSVVDGLKPGQRKIMFSAF 704
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R +KVAQLAG V+EH+AYHHGEQSL+ TI+ LAQ++VG+NN+ LL GQFGT L
Sbjct: 705 KRNLVRSLKVAQLAGYVSEHAAYHHGEQSLVQTIVGLAQDYVGANNVPLLYRDGQFGTRL 764
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDG-LHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
Y+E++TD TV F V + P+ L + G + + +L+ + +++ AFDR G +TK+
Sbjct: 921 YREHNTDVTVDFEVFIHPEVLRQWVAQGCVEERLQLREYIHATNIIAFDREGKITKYLDA 980
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+LKEFY VRLEYYA+R+++L L ALKL N RF+ E DG + R K+++
Sbjct: 981 ESVLKEFYLVRLEYYARRREFLLEQLQRAALKLENMVRFVNEVIDGTFIVTRRSMKDVLK 1040
Query: 339 ELIKRKYDSDPVKSWK 354
+L +R Y P + K
Sbjct: 1041 DLKQRGYTPFPPQQKK 1056
>gi|297736284|emb|CBI24922.3| unnamed protein product [Vitis vinifera]
Length = 1452
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 126/178 (70%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKE KEYF ++ +H+ F + + D I +AFSKK ++ERK WL R
Sbjct: 610 GLGTSTSKEGKEYFKDLGKHKKDFMWVDEKDGDAIELAFSKKKIEERKNWL--------R 661
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G YL K K I Y++FVNKELILFS D +RSIPS+ DGLKPG RK+LF
Sbjct: 662 QFQPGT---YLDQKE-KLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 717
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN +E K+AQ +G V+EHSAYHHGEQSL STII +AQ+FVGSNNINLL P GQFGT
Sbjct: 718 KRNFIKEAKIAQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGT 775
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 79/122 (64%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE++ DTTV F V MS + L A+ +GL + FKL T ++ S+M FD G + K++T
Sbjct: 944 DYKEHNDDTTVHFEVIMSEENLLMAKQEGLLQKFKLTTKISTSNMHLFDSNGTIKKYETP 1003
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
QIL+EF+ +RLE+Y KRK L L E LKL N+ RFI+ G++ + NRK+ ++
Sbjct: 1004 EQILEEFFHLRLEFYEKRKRVLLDNLELELLKLENKVRFILGVVRGEIIVSNRKRADLFH 1063
Query: 339 EL 340
EL
Sbjct: 1064 EL 1065
>gi|40804952|gb|AAR91744.1| topoisomerase II [Trichomonas vaginalis]
Length = 1458
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 141/217 (64%), Gaps = 12/217 (5%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GL TST++EAKEYFSN+ +H+ +F Y+ +ND+ I +AF+KK D+RK WL
Sbjct: 603 GLATSTAEEAKEYFSNISKHKKVFIYTNENDEERINLAFAKKRADDRKNWLA-------- 654
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
++ E YL TK T I Y++FV+KELILFS+ N R+IPS DG KPG RK+L+ CL
Sbjct: 655 --QLDANETYLGTKDTH-IKYSDFVDKELILFSSYANYRAIPSSIDGWKPGQRKILWVCL 711
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
K N + ++KVAQL+G V+E +AYHHGE SL TII + Q+FVGSNNIN+ QPIG GT L
Sbjct: 712 KNNIKNDLKVAQLSGKVSEQAAYHHGEASLNETIIGMCQDFVGSNNINVFQPIGMLGTRL 771
Query: 191 FIFESTNLSGAVVNALD-FGSGGWRFESNDYKEYHTD 226
E + V AL+ + E +D Y+TD
Sbjct: 772 AGGEDSGSPRYVYTALEKITRTIFMKEDDDLLTYNTD 808
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 79/129 (61%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
++++EYHT+ +V F++T+ ++ + E GL + FKL++++ ++M F+ + +F++
Sbjct: 981 SEFREYHTNVSVHFIITVDDSQMREIESVGLREFFKLKSSITATNMTLFNAQNKIVQFNS 1040
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
I+ ++Y VR++YY +R YL L + KL+NQARFI E G +++ + ++
Sbjct: 1041 PLDIINDYYPVRMKYYEERHRYLIDALQLQYKKLSNQARFIREVIAGIIKVNGVPRATIL 1100
Query: 338 AELIKRKYD 346
A L + YD
Sbjct: 1101 AALERGNYD 1109
>gi|242062820|ref|XP_002452699.1| hypothetical protein SORBIDRAFT_04g030880 [Sorghum bicolor]
gi|241932530|gb|EES05675.1| hypothetical protein SORBIDRAFT_04g030880 [Sorghum bicolor]
Length = 1452
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 123/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KE +EYF ++ H+ F + D D HI +AFSKK + +RK WLT +
Sbjct: 604 GLGTSTAKEGREYFKDITDHKKDFVWEDDQDGNHIELAFSKKRIADRKLWLTNFQPGT-- 661
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
Y+ + K + Y++F+NKELILFS D +RSIPS+ DGLKPG RK+LF
Sbjct: 662 ---------YI-DQQEKRVRYSDFINKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 711
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN +E KVAQ +G V+EHSAYHHGEQSL STII +AQNFVGSNNINL+ P GQFGT
Sbjct: 712 KRNFVKEAKVAQFSGYVSEHSAYHHGEQSLASTIIGMAQNFVGSNNINLMFPGGQFGT 769
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 73/119 (61%)
Query: 233 VTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEY 292
+ +S ++ A+ +GL K FKL TT+ S+M FD G + K+DT QIL+EF+ +RLE+
Sbjct: 952 IQLSEGNMNIAKEEGLVKKFKLTTTIGTSNMHLFDSNGKIRKYDTPEQILEEFFQLRLEF 1011
Query: 293 YAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKYDSDPVK 351
Y KRK+ L + E KL N+ RFI D ++ + NRK+ ++ EL ++ +D P K
Sbjct: 1012 YVKRKEALLKNIKLELKKLENKVRFIRCVVDNEIIVNNRKRADLFLELRQKNFDPFPKK 1070
>gi|255076711|ref|XP_002502027.1| predicted protein [Micromonas sp. RCC299]
gi|226517292|gb|ACO63285.1| predicted protein [Micromonas sp. RCC299]
Length = 1459
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 125/180 (69%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF+ ++ H+ F ++ D D I MAFSKK V++RK WL +
Sbjct: 638 GLGTSTAKEAKEYFAALDHHKKTFAWTTDGDGNLIDMAFSKKRVEDRKAWLNAY------ 691
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G YL T + Y +F+NKELILFS D RSIPS+ DG KP RKVLF+C
Sbjct: 692 --EPGT---YL-DMTGDDVRYDDFINKELILFSRADLMRSIPSVVDGFKPSQRKVLFSCF 745
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR + ++KVAQL+G V+EHSAYHHGE SL STI+ LAQ+FVGSNN+NLL P GQFGT L
Sbjct: 746 KRKLKSDIKVAQLSGYVSEHSAYHHGEASLASTIVGLAQDFVGSNNVNLLVPSGQFGTRL 805
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 83/131 (63%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE+HTDTTV F+VTM+P+ + KA+ DG+ K FKL ++ S+M AFD G +TK+ +
Sbjct: 970 DYKEHHTDTTVHFIVTMTPENMAKAQKDGIEKKFKLCAKVSTSNMHAFDEKGGITKYSSP 1029
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I++ F +RL+ YA+R+ L E +++N+ RFI+ DG++ I +KK +I
Sbjct: 1030 EAIMEAFVPLRLDAYARRRAMLIRQAEFELKRMSNKVRFILAVVDGEMTIGRKKKSVLIE 1089
Query: 339 ELIKRKYDSDP 349
EL YD P
Sbjct: 1090 ELEAAGYDKMP 1100
>gi|183987578|gb|ACC65779.1| topoisomerase II [Lyophyllum shimeji]
Length = 692
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 123/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST +A++YF +M++H I F + D D HI +AFSKK D+RK WL R
Sbjct: 459 GLGTSTDADARDYFGHMKKHMIPFAPTQDGDKEHIDLAFSKKKADDRKEWL--------R 510
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ G D+ + I Y+EF+NKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 511 HFKPGTYLDH----RLEEIPYSEFINKELILFSMADNIRSIPSVADGLKPGQRKVMWACF 566
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR ++E+KVAQL G + E +AYHHGE SL TI+NLAQNFVGSNN+NLL P GQ+GT
Sbjct: 567 KRKLKKEIKVAQLVGYIGEQAAYHHGEVSLAQTIVNLAQNFVGSNNLNLLDPRGQYGT 624
>gi|342186237|emb|CCC95723.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 1612
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 103/180 (57%), Positives = 128/180 (71%), Gaps = 8/180 (4%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KE +EYF N++RHR+ F Y DD I MAF+K VDERK W+T +
Sbjct: 593 GLGTSTAKEGREYFENIDRHRLNFVYEDKKDDDDIIMAFAKDKVDERKRWITDF------ 646
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ I E Y + +TY+EFV+KELILFS D ERSIPS+ DGLKPG RK++F+
Sbjct: 647 KANTNINESMNYN--VRNVTYSEFVHKELILFSVADCERSIPSVVDGLKPGQRKIMFSAF 704
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R +KVAQLAG V+EH+AYHHGEQSL+ TI+ LAQ++VG+NNI LL GQFGT L
Sbjct: 705 KRNLVRSIKVAQLAGYVSEHAAYHHGEQSLVQTIVGLAQDYVGANNIPLLHRDGQFGTRL 764
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 77/136 (56%), Gaps = 1/136 (0%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDG-LHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
Y+E++TD TV F V + P+ L + G L +L+ + +++ AFDR G +T +
Sbjct: 921 YREHNTDVTVDFEVFIHPEVLQQWTNQGCLEDKLQLREYINATNIIAFDREGRITNYADA 980
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+LKEFY VRLEYYA+R+ +L + +KL N RF+ E +G + R KE++A
Sbjct: 981 ESVLKEFYLVRLEYYARRQKFLVNHVDYTVVKLNNMIRFVNEVVNGTFVVTRRPMKEVLA 1040
Query: 339 ELIKRKYDSDPVKSWK 354
+L +R Y P + K
Sbjct: 1041 DLQQRGYTPFPPQQKK 1056
>gi|121308839|dbj|BAF43524.1| DNA topoisomerase II [Coprinopsis cinerea]
Length = 1569
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 125/178 (70%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS K+A+EYFS ME+H I F + + D I +AFSKK DERK WL R
Sbjct: 691 GLGTSEDKDAREYFSKMEKHMIPFAPTQEGDRELIDLAFSKKKADERKEWL--------R 742
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ + I Y+EF+NKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 743 QFKPGTFLDHRL----EEIPYSEFINKELILFSMADNVRSIPSIADGLKPGQRKVIWGCF 798
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR ++E+KVAQL G ++EH+AYHHGE SL +TIINLAQ++VGSNN+ LL P GQ+GT
Sbjct: 799 KRKLKKEIKVAQLVGYISEHAAYHHGEASLAATIINLAQDYVGSNNLALLSPNGQYGT 856
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 78/131 (59%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D+KE+H + V F VTM+P L KAE GL + F L T ++ ++M FD G + K++T
Sbjct: 1037 DFKEHHDNLNVLFEVTMNPKDLEKAEEKGLVEFFGLTTKVSTTNMILFDFEGKIKKYETP 1096
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ILK+FY +RL YY KRKDY L KL NQ RFI +L + NRKK +++A
Sbjct: 1097 EEILKDFYPMRLAYYQKRKDYQALELSTAYDKLNNQIRFIEMIIKKELVVSNRKKADIVA 1156
Query: 339 ELIKRKYDSDP 349
EL K + P
Sbjct: 1157 ELRKLNFRPFP 1167
>gi|57898980|dbj|BAD86854.1| DNA topoisomerase II [Coprinopsis cinerea]
Length = 1572
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 125/178 (70%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS K+A+EYFS ME+H I F + + D I +AFSKK DERK WL R
Sbjct: 691 GLGTSEDKDAREYFSKMEKHMIPFAPTQEGDRELIDLAFSKKKADERKEWL--------R 742
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ + I Y+EF+NKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 743 QFKPGTFLDHRL----EEIPYSEFINKELILFSMADNVRSIPSIADGLKPGQRKVIWGCF 798
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR ++E+KVAQL G ++EH+AYHHGE SL +TIINLAQ++VGSNN+ LL P GQ+GT
Sbjct: 799 KRKLKKEIKVAQLVGYISEHAAYHHGEASLAATIINLAQDYVGSNNLALLSPNGQYGT 856
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 78/131 (59%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D+KE+H + V F VTM+P L KAE GL + F L T ++ ++M FD G + K++T
Sbjct: 1037 DFKEHHDNLNVLFEVTMNPKDLEKAEEKGLVEFFGLTTKVSTTNMILFDFEGKIKKYETP 1096
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ILK+FY +RL YY KRKDY L KL NQ RFI +L + NRKK +++A
Sbjct: 1097 EEILKDFYPMRLAYYQKRKDYQALELSTAYDKLNNQIRFIEMIIKKELVVSNRKKADIVA 1156
Query: 339 ELIKRKYDSDP 349
EL K + P
Sbjct: 1157 ELRKLNFRPFP 1167
>gi|299755855|ref|XP_001828929.2| DNA topoisomerase II [Coprinopsis cinerea okayama7#130]
gi|298411411|gb|EAU92936.2| DNA topoisomerase II [Coprinopsis cinerea okayama7#130]
Length = 1557
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 125/178 (70%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS K+A+EYFS ME+H I F + + D I +AFSKK DERK WL R
Sbjct: 676 GLGTSEDKDAREYFSKMEKHMIPFAPTQEGDRELIDLAFSKKKADERKEWL--------R 727
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ + I Y+EF+NKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 728 QFKPGTFLDHRL----EEIPYSEFINKELILFSMADNVRSIPSIADGLKPGQRKVIWGCF 783
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR ++E+KVAQL G ++EH+AYHHGE SL +TIINLAQ++VGSNN+ LL P GQ+GT
Sbjct: 784 KRKLKKEIKVAQLVGYISEHAAYHHGEASLAATIINLAQDYVGSNNLALLSPNGQYGT 841
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 78/131 (59%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D+KE+H + V F VTM+P L KAE GL + F L T ++ ++M FD G + K++T
Sbjct: 1022 DFKEHHDNLNVLFEVTMNPKDLEKAEEKGLVEFFGLTTKVSTTNMILFDFEGKIKKYETP 1081
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ILK+FY +RL YY KRKDY L KL NQ RFI +L + NRKK +++A
Sbjct: 1082 EEILKDFYPMRLAYYQKRKDYQALELSTAYDKLNNQIRFIEMIIKKELVVSNRKKADIVA 1141
Query: 339 ELIKRKYDSDP 349
EL K + P
Sbjct: 1142 ELRKLNFRPFP 1152
>gi|145496633|ref|XP_001434307.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401431|emb|CAK66910.1| unnamed protein product [Paramecium tetraurelia]
Length = 1220
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 119/178 (66%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS EA+EYF N+ H I F+Y + DD I + F+KK ++RK WL +
Sbjct: 574 GLGTSDDLEAQEYFRNLISHTIQFRYDNEEDDQSIDLCFNKKKANDRKQWLAQY------ 627
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
D T K + Y +F++KELI FS DN RSIPSL DGLKPG RKVLF C
Sbjct: 628 ------NHDLYVDHTQKELGYQDFIHKELIHFSMADNIRSIPSLMDGLKPGQRKVLFACF 681
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN ++E+KV QL G +AEHSAYHHG+ SL++TII +AQNFVGSNNINLL P GQFG+
Sbjct: 682 KRNLKQEIKVVQLGGYIAEHSAYHHGDISLVTTIIGMAQNFVGSNNINLLLPRGQFGS 739
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 76/127 (59%), Gaps = 2/127 (1%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +EYHT + F + M+ + +++ ++ FKL T + ++M FD + KF++
Sbjct: 900 DLREYHTKYKIHFEIQMTEG--YVSQLKNPYEYFKLVTPFSNNNMVLFDGQNKIKKFESI 957
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL+EFY VRL++Y KRKDYL L E L N++RFI ++R++N KK +++
Sbjct: 958 AEILEEFYQVRLQFYQKRKDYLLSKLDREVQLLHNKSRFIKMVISEEIRLKNVKKADLVQ 1017
Query: 339 ELIKRKY 345
+L K ++
Sbjct: 1018 QLDKNQF 1024
>gi|183987590|gb|ACC65785.1| topoisomerase II [Pleurotus djamor]
Length = 735
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 124/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ +A+EYFS M +H I F D + I +AFSKK D+RK WL R
Sbjct: 502 GLGTSSDADAREYFSKMSKHMIPFATMEDEERPLIDLAFSKKKADDRKDWL--------R 553
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ + I YT+F+NKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 554 QFKPGTYLDH----NLEEIPYTDFINKELILFSMADNIRSIPSVADGLKPGQRKVIWGCF 609
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN ++E+KVAQL G ++EH+ YHHGE SL +TIINLAQN+VGSNNINLL P GQ+GT
Sbjct: 610 KRNLKKEIKVAQLVGYISEHATYHHGEASLAATIINLAQNYVGSNNINLLMPNGQYGT 667
>gi|328773079|gb|EGF83116.1| hypothetical protein BATDEDRAFT_18312, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 1218
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 124/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+ +AKEYFS+M +H F D I MAF+KK D RK WL
Sbjct: 672 GLGTSTTADAKEYFSDMNKHLKPFCRLDDESRELIDMAFNKKKADSRKEWLG-------- 723
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R + G D+ T+ I+ +F+N+ELILFS DN RSIPS DG KPG RK+LF C
Sbjct: 724 RFQPGTYMDHSVTE----ISLPDFINRELILFSMADNARSIPSSVDGFKPGQRKILFACF 779
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN + E+KVAQLAG VAEHSAYHHGEQSL +TI+N+AQNF+GSNN+ +L+P+GQFGT L
Sbjct: 780 KRNLKSEIKVAQLAGYVAEHSAYHHGEQSLNATIVNMAQNFIGSNNLGVLEPLGQFGTRL 839
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 87/133 (65%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTD+ V F+VT++ + AE +GL K FKL +++++S++ FD G + K+D
Sbjct: 1000 DYKEYHTDSKVHFIVTLTDQAMSLAESEGLEKRFKLISSVSVSNIVCFDLEGRIRKYDGV 1059
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I+K+FY +RL YY KRK+++ L E +L ++ RF+ E G L ++NRK+ +++
Sbjct: 1060 QDIIKDFYELRLSYYQKRKNHMLQTLTFEYERLESKVRFVTEIITGKLVVQNRKRIDLLK 1119
Query: 339 ELIKRKYDSDPVK 351
EL+ RKY P K
Sbjct: 1120 ELVTRKYKLIPKK 1132
>gi|83367166|gb|ABC17642.1| putative DNA topoisomerase IIbeta [Trypanosoma brucei]
gi|261335184|emb|CBH18178.1| DNA topoisomerase II, putative [Trypanosoma brucei gambiense
DAL972]
Length = 1465
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 127/180 (70%), Gaps = 8/180 (4%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++KE +EYF N++RHR+ F Y DD I +AF+K VDERK W+ M RR
Sbjct: 634 GLGTSSAKEGREYFENIDRHRLNFVYEDRKDDDSIVLAFAKDKVDERKRWVMESMSSARR 693
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + + + ++Y+EFV+KELILFS D ERSIPS+ DGLKPG RK++F+
Sbjct: 694 FESL--------SYNARDVSYSEFVHKELILFSVADCERSIPSVVDGLKPGQRKIMFSAF 745
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R +KVA+ AG V+EH+AYHHGEQSL+ TI+ LAQ++VG+NN+ LL GQFGT L
Sbjct: 746 KRNLVRSLKVARFAGYVSEHAAYHHGEQSLVQTIVGLAQDYVGANNVPLLYRDGQFGTRL 805
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDG-LHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
Y+E++TD TV F V + P+ L + G + + +L+ + +++ AFDR G +TK+
Sbjct: 962 YREHNTDVTVDFEVFIHPEVLRQWVAQGCVEERLQLREYIHATNIIAFDREGKITKYLDA 1021
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+LKEFY VRLEYYA+R+++L L ALKL N RF+ E DG + R K+++
Sbjct: 1022 ESVLKEFYLVRLEYYARRREFLLEQLQRAALKLENMVRFVNEVIDGTFIVTRRSMKDVLK 1081
Query: 339 ELIKRKYDSDPVKSWK 354
+L +R Y P + K
Sbjct: 1082 DLKQRGYTPFPPQQKK 1097
>gi|413938393|gb|AFW72944.1| DNA topoisomerase 2 [Zea mays]
Length = 1412
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 123/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KE ++YF ++ H+ F + D D HI +AFSKK + +RK WLT +
Sbjct: 605 GLGTSTAKEGRKYFEDIIDHKKDFVWVDDQDGNHIELAFSKKRIADRKQWLTNFQPGT-- 662
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
Y+ + K + Y++F+NKELILFS D +RSIPS+ DGLKPG RK+LF
Sbjct: 663 ---------YI-DQREKQVKYSDFINKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 712
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN +E KVAQ +G V+EHSAYHHGEQSL STII +AQNFVGSNNINL+ P GQFGT
Sbjct: 713 KRNFVKEAKVAQFSGYVSEHSAYHHGEQSLASTIIGMAQNFVGSNNINLMSPNGQFGT 770
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 70/115 (60%)
Query: 235 MSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYA 294
+S ++ A+ +GL K FKL TT+ ++M FD G + K+DT QIL+EF+ +RLE+Y
Sbjct: 956 LSEANVNVAKEEGLVKKFKLTTTIGTTNMHLFDSDGKIRKYDTPEQILEEFFQLRLEFYC 1015
Query: 295 KRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKYDSDP 349
KRK+ L + + KL N+ RFI D ++ + NRK+ ++ EL + +D P
Sbjct: 1016 KRKEALLKNIKLDLKKLENKVRFIRCVVDNEIIVNNRKRADLFLELRHKNFDPFP 1070
>gi|125540787|gb|EAY87182.1| hypothetical protein OsI_08583 [Oryza sativa Indica Group]
Length = 1486
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 120/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS E ++YF ++ +H+ F + D DD I +AFSKK + +RK WLT +
Sbjct: 578 GLGTSTSSEGRQYFQDIAKHKKDFVWKNDQDDNDIELAFSKKRITDRKEWLTNFQSGTHL 637
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E K I Y++F+NKELI FS D RSIPS+ DGLKPG RK+LF
Sbjct: 638 DTE------------GKYIKYSDFINKELIQFSMADLLRSIPSMVDGLKPGQRKILFCSF 685
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN +E+KVAQ +G V+EHSAYHHGEQSL STI +AQ+FVGSNNINLLQP GQFGT
Sbjct: 686 KRNLVKEIKVAQFSGYVSEHSAYHHGEQSLASTITGMAQDFVGSNNINLLQPNGQFGT 743
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 81/132 (61%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTN 279
+ Y D V+F++T+S + + A +GL K FKL TT+ ++M FD G + K+DT
Sbjct: 934 FDTYSDDKNVEFLITLSKENMAIALQEGLEKKFKLTTTIGTTNMHLFDSNGKIRKYDTPE 993
Query: 280 QILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAE 339
ILKEF+ +RLE+Y KRK L + E KL+N+ RFI+ +GD+ + NRK+ E+ E
Sbjct: 994 DILKEFFGLRLEFYEKRKRVLLENIELELKKLSNKVRFILAVVEGDIIVNNRKRAELFVE 1053
Query: 340 LIKRKYDSDPVK 351
L ++ +D P K
Sbjct: 1054 LKQKGFDPFPRK 1065
>gi|183987584|gb|ACC65782.1| topoisomerase II [Pleurotus cornucopiae]
Length = 692
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 124/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ +A+EYFS M +H I F D + A I +AFSKK D+RK WL R
Sbjct: 459 GLGTSSDADAREYFSQMGKHMIPFATMEDEERALIDLAFSKKKADDRKEWL--------R 510
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ I +T+F+NKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 511 QFKPGTYLDH----NIDEIPFTDFINKELILFSMADNIRSIPSVADGLKPGQRKVIWGCF 566
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR ++E+KVAQL G ++EH+AYHHGE SL STI+NLAQN+VGSNNINLL P GQ+GT
Sbjct: 567 KRKLKKEIKVAQLVGYISEHAAYHHGEMSLSSTIVNLAQNYVGSNNINLLSPNGQYGT 624
>gi|125583360|gb|EAZ24291.1| hypothetical protein OsJ_08043 [Oryza sativa Japonica Group]
Length = 1487
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 120/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS E ++YF ++ +H+ F + D DD I +AFSKK + +RK WLT +
Sbjct: 578 GLGTSTSSEGRQYFQDIAKHKKDFVWKNDQDDNDIELAFSKKRITDRKEWLTNFQSGTHL 637
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E K I Y++F+NKELI FS D RSIPS+ DGLKPG RK+LF
Sbjct: 638 DTE------------GKYIKYSDFINKELIQFSMADLLRSIPSMVDGLKPGQRKILFCSF 685
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN +E+KVAQ +G V+EHSAYHHGEQSL STI +AQ+FVGSNNINLLQP GQFGT
Sbjct: 686 KRNLVKEIKVAQFSGYVSEHSAYHHGEQSLASTITGMAQDFVGSNNINLLQPNGQFGT 743
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 81/132 (61%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTN 279
+ Y D V+F++T+S + + A +GL K FKL TT+ ++M FD G + K+DT
Sbjct: 934 FDTYSDDKNVEFLITLSKENMAIALQEGLEKKFKLTTTIGTTNMHLFDSNGKIRKYDTPE 993
Query: 280 QILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAE 339
ILKEF+ +RLE+Y KRK L + E KL+N+ RFI+ +GD+ + NRK+ E+ E
Sbjct: 994 DILKEFFGLRLEFYEKRKRVLLENIELELKKLSNKVRFILAVVEGDIIVNNRKRAELFVE 1053
Query: 340 LIKRKYDSDPVK 351
L ++ +D P K
Sbjct: 1054 LKQKGFDPFPRK 1065
>gi|41052970|dbj|BAD07880.1| putative DNA topoisomerase II [Oryza sativa Japonica Group]
Length = 1525
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 120/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS E ++YF ++ +H+ F + D DD I +AFSKK + +RK WLT +
Sbjct: 616 GLGTSTSSEGRQYFQDIAKHKKDFVWKNDQDDNDIELAFSKKRITDRKEWLTNFQSGTHL 675
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E K I Y++F+NKELI FS D RSIPS+ DGLKPG RK+LF
Sbjct: 676 DTE------------GKYIKYSDFINKELIQFSMADLLRSIPSMVDGLKPGQRKILFCSF 723
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN +E+KVAQ +G V+EHSAYHHGEQSL STI +AQ+FVGSNNINLLQP GQFGT
Sbjct: 724 KRNLVKEIKVAQFSGYVSEHSAYHHGEQSLASTITGMAQDFVGSNNINLLQPNGQFGT 781
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 81/132 (61%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTN 279
+ Y D V+F++T+S + + A +GL K FKL TT+ ++M FD G + K+DT
Sbjct: 972 FDTYSDDKNVEFLITLSKENMAIALQEGLEKKFKLTTTIGTTNMHLFDSNGKIRKYDTPE 1031
Query: 280 QILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAE 339
ILKEF+ +RLE+Y KRK L + E KL+N+ RFI+ +GD+ + NRK+ E+ E
Sbjct: 1032 DILKEFFGLRLEFYEKRKRVLLENIELELKKLSNKVRFILAVVEGDIIVNNRKRAELFVE 1091
Query: 340 LIKRKYDSDPVK 351
L ++ +D P K
Sbjct: 1092 LKQKGFDPFPRK 1103
>gi|183987572|gb|ACC65776.1| topoisomerase II [Pleurotus eryngii var. ferulae]
Length = 692
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 124/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ +A+EYFS M +H I F D + A I +AFSKK D+RK WL R
Sbjct: 459 GLGTSSDADAREYFSQMGKHMIPFATMEDEERALIDLAFSKKKADDRKEWL--------R 510
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ I +T+F+NKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 511 QFKPGTYLDH----NIDEIPFTDFINKELILFSMADNIRSIPSVADGLKPGQRKVIWGCF 566
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR ++E+KVAQL G ++EH+AYHHGE SL STI+NLAQN+VGSNNINLL P GQ+GT
Sbjct: 567 KRKLKKEIKVAQLVGYISEHAAYHHGEMSLSSTIVNLAQNYVGSNNINLLSPNGQYGT 624
>gi|183987580|gb|ACC65780.1| topoisomerase II [Pleurotus eryngii var. eryngii]
Length = 680
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 124/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ +A+EYFS M +H + F D + A I +AFSKK D+RK WL R
Sbjct: 447 GLGTSSDADAREYFSQMSKHMVPFATMEDEERALIDLAFSKKKADDRKEWL--------R 498
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ I +T+F+NKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 499 QFKPGTYLDH----NIDEIPFTDFINKELILFSMADNIRSIPSVADGLKPGQRKVIWGCF 554
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR ++E+KVAQL G ++EH+AYHHGE SL STI+NLAQN+VGSNNINLL P GQ+GT
Sbjct: 555 KRKLKKEIKVAQLVGYISEHAAYHHGEMSLSSTIVNLAQNYVGSNNINLLSPNGQYGT 612
>gi|393219003|gb|EJD04491.1| DNA topoisomerase II [Fomitiporia mediterranea MF3/22]
Length = 1509
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 123/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +A++YFSNM +H I F + + D I +AFSKK DERK WL R
Sbjct: 627 GLGTSKDSDARDYFSNMGKHMIPFATTQEGDRELIELAFSKKKADERKEWL--------R 678
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ G D+ I Y++F+NKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 679 QFRPGTYLDH----NVDEIPYSDFINKELILFSMADNIRSIPSVADGLKPGQRKVIWGCF 734
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR ++E+KVAQL G ++EH+AYHHGEQSL TI+NLAQ+FVGSNN+NLL P GQ+GT
Sbjct: 735 KRKLKKEIKVAQLVGYISEHAAYHHGEQSLTMTIVNLAQDFVGSNNMNLLLPNGQYGT 792
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 88/146 (60%), Gaps = 1/146 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE+H + V FVV M+ +L KAE GL + FKL + ++ S+M FD G + K++T
Sbjct: 953 DYKEHHDNRNVHFVVNMNAKELEKAEAQGLEEYFKLTSKISTSNMICFDFEGKIKKYNTP 1012
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL++F+ VRL Y KRKDYL L E KL+NQARF+ +L + RKK +++A
Sbjct: 1013 EEILEDFFPVRLGLYQKRKDYLANELQLEHEKLSNQARFVQMIVKKELVVSGRKKVDIVA 1072
Query: 339 ELIKRKYDSDP-VKSWKMKQNKENAL 363
+L K+ + P V K E+AL
Sbjct: 1073 DLRKKNFRPFPKVAKAKAAGETEDAL 1098
>gi|183987588|gb|ACC65784.1| topoisomerase II [Pleurotus cystidiosus]
Length = 692
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 124/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ +A+EYFS M +H I F D + A I +AFSKK D+RK WL R
Sbjct: 459 GLGTSSDADAREYFSQMGKHMIPFATMEDEERALIDLAFSKKKADDRKEWL--------R 510
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ I +T+F+NKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 511 QFKPGTYLDH----NIDEIPFTDFINKELILFSMADNIRSIPSVADGLKPGQRKVIWGCF 566
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR ++E+KVAQL G ++EH+AYHHGE SL STI+NLAQN+VGSNNINLL P GQ+GT
Sbjct: 567 KRKLKKEIKVAQLVGYISEHAAYHHGEMSLSSTIVNLAQNYVGSNNINLLSPNGQYGT 624
>gi|183987576|gb|ACC65778.1| topoisomerase II [Pleurotus columbinus]
Length = 692
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 124/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ +A+EYFS M +H I F D + A I +AFSKK D+RK WL R
Sbjct: 459 GLGTSSDADAREYFSRMGKHMIPFAIMEDEERALIDLAFSKKKADDRKEWL--------R 510
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ I +T+F+NKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 511 QFKPGTYLDH----NIDEIPFTDFINKELILFSMADNIRSIPSVADGLKPGQRKVIWGCF 566
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR ++E+KVAQL G ++EH+AYHHGE SL STI+NLAQN+VGSNNINLL P GQ+GT
Sbjct: 567 KRKLKKEIKVAQLVGYISEHAAYHHGEMSLSSTIVNLAQNYVGSNNINLLSPNGQYGT 624
>gi|449550442|gb|EMD41406.1| hypothetical protein CERSUDRAFT_109994 [Ceriporiopsis subvermispora
B]
Length = 1522
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +A+EYF NM +H I F + + D I MAFSKK DERK WL +
Sbjct: 686 GLGTSVDSDAREYFKNMRKHMIPFAPTEEGDHELIEMAFSKKKADERKEWLRQF------ 739
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R + D + I +++F+N+ELILFS DN RSIPS+ DGLKPG RKVL++C
Sbjct: 740 RPGTFLNHD------QRQIKFSDFINRELILFSMADNIRSIPSVADGLKPGQRKVLWSCF 793
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR + E+KVAQL G V+EH+ YHHGE SLM TI+NLAQ+FVGSNN+N+L P GQFGT
Sbjct: 794 KRGLKSEIKVAQLVGYVSEHAQYHHGEMSLMQTIVNLAQDFVGSNNMNILMPNGQFGT 851
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 88/146 (60%), Gaps = 1/146 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE+H + V FV+ M+ + L KAE GL + FKL + S+M FD G + K+++
Sbjct: 1012 DYKEHHDNMNVHFVINMTANDLEKAEQQGLQEFFKLTGKINTSNMICFDFDGQIRKYNSP 1071
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I++E+Y RL YY KRKDYL L + +L+NQARF+ D +L + NRKK +++A
Sbjct: 1072 EEIVEEYYPKRLAYYQKRKDYLANELQLQLDRLSNQARFVKMIVDRELVVSNRKKIDIVA 1131
Query: 339 ELIKRKYDSDP-VKSWKMKQNKENAL 363
EL K ++ P V K E+AL
Sbjct: 1132 ELRKLEFRPFPKVAKAKAAGETEDAL 1157
>gi|356555329|ref|XP_003545986.1| PREDICTED: DNA topoisomerase 2-like [Glycine max]
Length = 1484
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 123/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST +E +EYF ++++H+ F + + D I MAFSKK ++RK W+ R
Sbjct: 612 GLGTSTPQEGREYFRDLDKHKKDFVWDDEQDGGAIEMAFSKKKAEDRKIWI--------R 663
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D++ K I Y +FVNKELIL+S D +RSIPS+ DGLKPG RK+LF
Sbjct: 664 NFEPGTCRDHM----AKYINYRDFVNKELILYSRADLQRSIPSMVDGLKPGQRKILFCSF 719
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+ +E+KV Q G V+EHSAYHHGEQSL STIIN+AQ+FVGSNNINLL+P GQFGT
Sbjct: 720 KKKLSKEIKVGQFIGYVSEHSAYHHGEQSLASTIINMAQDFVGSNNINLLKPNGQFGT 777
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 80/134 (59%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+D+++ D TV V M +K+ +GL K FKL ++++ ++M FD G + K+D
Sbjct: 941 DDFRQNGDDATVDIEVRMKLEKIVGIMQEGLLKKFKLTSSISTNNMHLFDAEGKIKKYDN 1000
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
QIL+EF+ +RLEYY +RK ++ L L L N+ RFI+ +G++ + NRKK E++
Sbjct: 1001 PEQILEEFFPLRLEYYERRKKHILNNLEQLLLILDNKVRFILGVVNGEIVVSNRKKAELL 1060
Query: 338 AELIKRKYDSDPVK 351
EL ++ + P K
Sbjct: 1061 IELQQKGFTPMPRK 1074
>gi|357137146|ref|XP_003570162.1| PREDICTED: DNA topoisomerase 2-like [Brachypodium distachyon]
Length = 1494
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 124/179 (69%), Gaps = 14/179 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWME-ECR 69
GLGTST+ E +EYF + HR F ++ D D I +AFSKK + +RK WL+ + C
Sbjct: 612 GLGTSTADEGREYFEKIAHHRKDFVWADDKDGDAIELAFSKKRIADRKDWLSNYQPGTCL 671
Query: 70 RRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
++E K I Y++F+NKELILFS D ERSIPS+ DGLKPG RK+LF+
Sbjct: 672 DQRE-------------KRIKYSDFINKELILFSMADLERSIPSMVDGLKPGQRKILFSS 718
Query: 130 LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN +E+KVAQ G V+EHSAYHHGEQSL STI+ +AQ++VGSNNI+LL+P GQFGT
Sbjct: 719 FKRNLVKEIKVAQFIGYVSEHSAYHHGEQSLASTILGMAQDYVGSNNISLLEPRGQFGT 777
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 80/133 (60%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D + D++V F +T+S + A +GL K FKL T+ ++M FD G + K+DT
Sbjct: 970 DLRSQCDDSSVYFELTLSEKNMAIAMQEGLEKKFKLTNTMGTTNMHLFDSNGKIRKYDTP 1029
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL+EF+ +RLE+Y +RK + + E LKL N+ RFI GD+++ NRK+ E+
Sbjct: 1030 EEILQEFFTLRLEFYGRRKITMLKNMRVELLKLENRVRFIRSVISGDIKVNNRKRAELFL 1089
Query: 339 ELIKRKYDSDPVK 351
EL ++ +D+ P K
Sbjct: 1090 ELKEKNFDAFPKK 1102
>gi|183987570|gb|ACC65775.1| topoisomerase II [Pleurotus citrinopileatus]
Length = 709
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 124/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ +A+EYFS M +H I F D + A I +AFSKK D+RK WL R
Sbjct: 476 GLGTSSDADAREYFSQMGKHMIPFATMEDEERALIDLAFSKKKADDRKEWL--------R 527
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ I +T+F+NKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 528 QFKPGTYLDH----NIDEIPFTDFINKELILFSMADNIRSIPSVADGLKPGQRKVIWGCF 583
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR ++E+KVAQL G ++EH+AYHHGE SL STI+NLAQN+VGSNNINLL P GQ+GT
Sbjct: 584 KRKLKKEIKVAQLVGYISEHAAYHHGEMSLSSTIVNLAQNYVGSNNINLLSPNGQYGT 641
>gi|110430606|gb|ABG73430.1| DNA topoisomerase II [Pleurotus ostreatus]
Length = 1571
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 124/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ +A+EYFS M +H I F D + A I +AFSKK D+RK W +R
Sbjct: 693 GLGTSSDADAREYFSQMGKHMIPFATMEDEERALIDLAFSKKKADDRKEW--------QR 744
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ I +T+F+NKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 745 QFKPGTYLDH----NIDEIPFTDFINKELILFSMADNIRSIPSVADGLKPGQRKVIWGCF 800
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR ++E+KVAQL G ++EH+AYHHGE SL STI+NLAQN+VGSNNINLL P GQ+GT
Sbjct: 801 KRKLKKEIKVAQLVGYISEHAAYHHGEMSLSSTIVNLAQNYVGSNNINLLSPNGQYGT 858
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 81/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYH + V +VVTM +L KAE GL + FKL T + S+M FD G + K+D+
Sbjct: 1019 DYKEYHDNLNVHYVVTMPAKELEKAEQQGLIEFFKLTTKINTSNMMCFDFDGKMKKYDSP 1078
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL+EFY VRL YY KRKD+L L +L+NQARFI D L + NRKK ++I
Sbjct: 1079 EEILEEFYPVRLAYYQKRKDFLANELQTVFERLSNQARFIQMIVDKQLSVSNRKKADIIQ 1138
Query: 339 ELIKRKYDSDP 349
+L K ++ P
Sbjct: 1139 DLRKHQFRPFP 1149
>gi|378755091|gb|EHY65118.1| DNA topoisomerase 2 [Nematocida sp. 1 ERTm2]
Length = 1186
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/180 (57%), Positives = 126/180 (70%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+K+AK+YFSN++ H F D I +AFSKK V+ RK WL
Sbjct: 583 GLGTSTAKDAKDYFSNLDFHIKEFNTVDSVDRDKIELAFSKKRVESRKVWL--------- 633
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
KE G YL + +AI+ F+++ELI FS DN RSIP++ DG+KPG RK++F C
Sbjct: 634 -KEFVPGT-YLDNRV-QAISIKNFIDRELIHFSLADNIRSIPNMIDGMKPGQRKIIFCCF 690
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR R E+KVAQLAG V+EHSAYHHGEQSL STI+NLAQ++VGSNNI LLQPIGQFGT L
Sbjct: 691 KRQLRTEIKVAQLAGYVSEHSAYHHGEQSLCSTIVNLAQDYVGSNNIPLLQPIGQFGTRL 750
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 75/127 (59%), Gaps = 5/127 (3%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D++EY+TDT V F V +S HK + KVFKL ++I++M AF+ GVL K+ T
Sbjct: 905 DFREYNTDTRVNFEVVVSTK--HKI---NVPKVFKLSNQISIANMVAFNSKGVLQKYANT 959
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ILKEF+ VR + Y +RKD+L L E L N+ RFI E L+I RK ++I
Sbjct: 960 TEILKEFFIVRRDLYVRRKDFLLKKLLTETTILENKVRFIKEVVADTLKILKRKSSDVIN 1019
Query: 339 ELIKRKY 345
+L + Y
Sbjct: 1020 DLTAKDY 1026
>gi|115448107|ref|NP_001047833.1| Os02g0699700 [Oryza sativa Japonica Group]
gi|113537364|dbj|BAF09747.1| Os02g0699700, partial [Oryza sativa Japonica Group]
Length = 956
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 120/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS E ++YF ++ +H+ F + D DD I +AFSKK + +RK WLT +
Sbjct: 616 GLGTSTSSEGRQYFQDIAKHKKDFVWKNDQDDNDIELAFSKKRITDRKEWLTNFQSGTHL 675
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E K I Y++F+NKELI FS D RSIPS+ DGLKPG RK+LF
Sbjct: 676 DTE------------GKYIKYSDFINKELIQFSMADLLRSIPSMVDGLKPGQRKILFCSF 723
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN +E+KVAQ +G V+EHSAYHHGEQSL STI +AQ+FVGSNNINLLQP GQFGT
Sbjct: 724 KRNLVKEIKVAQFSGYVSEHSAYHHGEQSLASTITGMAQDFVGSNNINLLQPNGQFGT 781
>gi|344231970|gb|EGV63849.1| DNA topoisomerase II [Candida tenuis ATCC 10573]
gi|344231971|gb|EGV63850.1| hypothetical protein CANTEDRAFT_104632 [Candida tenuis ATCC 10573]
Length = 1429
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/210 (50%), Positives = 129/210 (61%), Gaps = 23/210 (10%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST EA+EYF+ +++H F D I +AFSKK DERK WL +
Sbjct: 653 GLGTSTDVEAREYFAALDKHLKQFHAIQGEDPDLIDLAFSKKKADERKNWLQEFQPGTHL 712
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E+ I I ++F+NKELILFS DN RSIPS+ DG KPG RKVLF C
Sbjct: 713 DPELKI------------IPISDFINKELILFSMADNVRSIPSVLDGFKPGQRKVLFGCF 760
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN + E+KVAQLAG V+EH+ YHHGEQSL+ TII LAQNF+GSNN+NLL+P G FGT
Sbjct: 761 KRNLKSEIKVAQLAGYVSEHTGYHHGEQSLIQTIIGLAQNFIGSNNLNLLKPNGAFGTRA 820
Query: 191 ----------FIFESTN-LSGAVVNALDFG 209
+IF N ++ + N LD G
Sbjct: 821 AGGKDFSAARYIFTEINEITRKIFNPLDNG 850
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 82/127 (64%), Gaps = 1/127 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H ++FVV +S +++ K+ GL FKL +++ +++M AFD G + K++++
Sbjct: 980 DMEEQH-GMNIRFVVKLSQEEMAKSHQVGLLDRFKLISSINLTNMVAFDPRGKIKKYESS 1038
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ILK+FY VRLE+Y KRKD++ L + KLT QARFI + + + N+K+KE+I
Sbjct: 1039 LEILKDFYYVRLEFYQKRKDFMIDELKNQLDKLTEQARFIKLIIEKVISVSNKKRKELIE 1098
Query: 339 ELIKRKY 345
L K K+
Sbjct: 1099 ILQKHKF 1105
>gi|115392233|gb|ABI96917.1| topoisomerase [Trypanosoma congolense]
gi|342186236|emb|CCC95722.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 1439
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 127/180 (70%), Gaps = 8/180 (4%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +KE +EYF N++RHR+ F Y DD I MAF+K VDERK W+T +
Sbjct: 593 GLGTSGAKEGREYFENIDRHRLNFVYEDKKDDDDIIMAFAKDKVDERKRWITDF------ 646
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ I E Y + +TY+EFV+KELILFS D ERSIPS+ DGLKPG RK++F+
Sbjct: 647 KANTNINESMNYN--VRNVTYSEFVHKELILFSVADCERSIPSVVDGLKPGQRKIMFSAF 704
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R +KVAQLAG V+EH+AYHHGEQSL+ TI+ LAQ++VG+NNI LL GQFGT L
Sbjct: 705 KRNLVRSIKVAQLAGYVSEHAAYHHGEQSLVQTIVGLAQDYVGANNIPLLHRDGQFGTRL 764
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 79/136 (58%), Gaps = 1/136 (0%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDG-LHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
Y+E++TD TV F V + P+ L + G L +L+ + +++ AFDR G +TK+
Sbjct: 921 YREHNTDVTVDFEVFIHPEVLQQWTNQGCLEDKLQLREYIHATNIIAFDREGRITKYLDA 980
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+LKEFY VRLEYYA+R+++L L LKL N RF+ E +G + R KE++A
Sbjct: 981 ESVLKEFYLVRLEYYARRREFLLEQLQRSVLKLENMVRFVNEVVNGTFVVTRRPMKEVLA 1040
Query: 339 ELIKRKYDSDPVKSWK 354
+L +R Y P + K
Sbjct: 1041 DLQQRGYTPFPPQQKK 1056
>gi|402220357|gb|EJU00429.1| DNA topoisomerase II [Dacryopinax sp. DJM-731 SS1]
Length = 1365
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++ EYF NME H I F + + + I MAFSKK V+ RK WL R
Sbjct: 704 GLGTSGPEDGMEYFGNMETHLIPFHPTQEGERELIDMAFSKKKVEARKDWL--------R 755
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ G D+ + ITY +F+NKELILFS DN RSIPS+CDGLKPG RKVLF
Sbjct: 756 NFKPGTYMDH----SVDEITYDDFINKELILFSMADNIRSIPSMCDGLKPGHRKVLFGVF 811
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + E+KVAQLAG + EH+AYHHGEQSL STII +AQNFVG+NN+NLL P G FG+
Sbjct: 812 KRNLKNEIKVAQLAGYIGEHTAYHHGEQSLHSTIIGMAQNFVGANNLNLLIPSGGFGS 869
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 83/131 (63%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHT ++F V +S ++ KAE +GL K FKL ++ ++M FD G + KF++
Sbjct: 1032 DYKEYHTTRHIRFTVQLSGTEMQKAEAEGLEKYFKLLEAISTTNMMCFDADGKMRKFNSP 1091
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
++++F +RL++Y KRKDYL L E KL NQARF+ D +L I NRKK +++A
Sbjct: 1092 EDLIEDFCPLRLKFYQKRKDYLADQLMVELEKLNNQARFVKMIIDRELVISNRKKVDIVA 1151
Query: 339 ELIKRKYDSDP 349
EL K++ P
Sbjct: 1152 ELRKKELKPFP 1162
>gi|145522376|ref|XP_001447032.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124414532|emb|CAK79635.1| unnamed protein product [Paramecium tetraurelia]
Length = 1272
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 102/179 (56%), Positives = 126/179 (70%), Gaps = 14/179 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +EA+EYF N+ H I F+Y GD+DD I + F+KK ++RK WL + +
Sbjct: 587 GLGTSDDQEAQEYFKNLRTHTIQFRYDGDDDDNSIDLCFNKKKANDRKQWLAQYNHD--- 643
Query: 71 RKEMGIGEDYLYTKTTKA-ITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
LY TK+ + Y+EF++KELI FS DN RSIPSL DGLKPG RKVLF C
Sbjct: 644 ----------LYVDHTKSELGYSEFIHKELIHFSMADNIRSIPSLMDGLKPGQRKVLFAC 693
Query: 130 LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN ++E+KV QL G +AEHSAYHHG+ SL+STII +AQNFVGSNNINLL P GQFG+
Sbjct: 694 FKRNLKQEIKVVQLGGYIAEHSAYHHGDLSLVSTIIGMAQNFVGSNNINLLLPKGQFGS 752
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +EYHT + F + M + ++ + FKL + + S+M FD + K++
Sbjct: 913 DLREYHTKYKIHFEIQMVDGFVQ--DLKNPLEYFKLSSPASCSNMVLFDSNSKIKKYECV 970
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I++EFY VRLE+Y KRKDYL L E L N+ +FI ++++ N KK +++
Sbjct: 971 QDIMEEFYQVRLEFYHKRKDYLISKLDREVQLLDNKLKFIKMVISEEIKLRNVKKVDLVK 1030
Query: 339 ELIK 342
+L K
Sbjct: 1031 QLDK 1034
>gi|409051031|gb|EKM60507.1| hypothetical protein PHACADRAFT_83842 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1551
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 123/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++A+EYFS M +H I F D + I +AFSKK D+RK WL R
Sbjct: 683 GLGTSKDEDAREYFSRMNKHMIPFATVKDGERDLIDLAFSKKKADDRKEWL--------R 734
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D+ T+ I+ ++F+N+ELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 735 NLEPGTYLDH----NTREISVSDFINRELILFSYADNVRSIPSVADGLKPGQRKVIWGCF 790
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR + E+KVAQL G ++E +AYHHGEQSLM TI+NLAQ+F+GSNN+NLL P GQFGT
Sbjct: 791 KRKLKNEIKVAQLVGYISEKAAYHHGEQSLMMTIVNLAQDFIGSNNVNLLMPNGQFGT 848
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYH + V FVVT+S + KAE GL++ FKL + S+M FD G + K+ +
Sbjct: 1009 DYKEYHDNMNVHFVVTLSEKDMEKAEAQGLYEFFKLTGKINTSNMICFDFDGKIKKYGSP 1068
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I+++FY VRL +Y KRKD++ L E + TNQARFI +L + RKK ++I
Sbjct: 1069 EEIVEDFYPVRLAWYQKRKDHMAEQLQLELERSTNQARFISMIVSKELVVSGRKKADVII 1128
Query: 339 ELIKRKYDSDP 349
+L K+++ P
Sbjct: 1129 DLRKKEFRPFP 1139
>gi|224055129|ref|XP_002298421.1| predicted protein [Populus trichocarpa]
gi|222845679|gb|EEE83226.1| predicted protein [Populus trichocarpa]
Length = 1468
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 124/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKE K YF ++++H+ F + + D I +AFSKK ++ RK WL R
Sbjct: 607 GLGTSTSKEGKAYFQSLDKHKKDFIWMDEQDGDAIELAFSKKKIEARKNWL--------R 658
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D + K I Y++F+NKELILFS D +RSIPS+ DGLKPG RK+LF
Sbjct: 659 QYEPGTHLD----QNQKLIKYSDFINKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 714
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN +E K++Q +G V+EHSAYHHGEQSL STII +AQ+FVGSNNINLL P GQFGT
Sbjct: 715 KRNFVKEAKISQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGT 772
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 84/134 (62%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D+++Y D TV F V +S + + A+ +GL K FKL TT++ S+M FD GV+ K+D
Sbjct: 945 DFRKYGDDATVVFEVLLSEENMMIAKQEGLLKKFKLTTTISTSNMHLFDSAGVIKKYDNP 1004
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
QIL+EF+ +RLEYY +RK L L E LKL N+ RFI+ G++ + NRK+ ++
Sbjct: 1005 EQILEEFFHLRLEYYERRKKVLLENLEFELLKLENKVRFILGVVRGEIIVNNRKRADLFL 1064
Query: 339 ELIKRKYDSDPVKS 352
EL ++ + P KS
Sbjct: 1065 ELHQKGFTPIPKKS 1078
>gi|392596931|gb|EIW86253.1| DNA topoisomerase II [Coniophora puteana RWD-64-598 SS2]
Length = 1558
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 123/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ +A+ YF NM +H I F + D D I +AFSKK D+RK WL R
Sbjct: 686 GLGTSSDADARYYFGNMRKHMIPFAATQDGDRELIDLAFSKKKADDRKEWL--------R 737
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ G D+ I Y++F+N+ELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 738 QFRPGTYLDH----NIDEIPYSDFINRELILFSMADNVRSIPSIADGLKPGQRKVIWGCF 793
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR ++E+KVAQL G ++E +AYHHGEQSLM+TI+NLAQ++VGSNN+NLL P GQFGT
Sbjct: 794 KRKLKKEIKVAQLVGYISEVAAYHHGEQSLMATIVNLAQDYVGSNNVNLLMPNGQFGT 851
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 95/164 (57%), Gaps = 6/164 (3%)
Query: 188 TFLFIFESTNLSGAVVNAL--DFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLHKAEM 245
T L ++E T A + A+ D G G + DYKE+H + V FVVTMS + KAE
Sbjct: 983 TELPVWEWTQSFKAKLEAMIGDKGEG----DVKDYKEHHDNVNVHFVVTMSAKGMAKAEA 1038
Query: 246 DGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLG 305
GL + FKL ++ ++M F+ G + K+ +I++EFY RL YY KRKD+L L
Sbjct: 1039 QGLVEFFKLSKPMSTTNMICFNFEGKIAKYRAPEEIVEEFYPKRLAYYQKRKDHLASELQ 1098
Query: 306 AEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKYDSDP 349
+ KL+NQARF+ D +L + NR+K+E+IA+L K + P
Sbjct: 1099 NQFEKLSNQARFVQMIVDKELSVSNRRKEEIIADLRKHNFRPFP 1142
>gi|190350975|dbj|BAB13754.2| type II DNA topoisomerase [Pichia guilliermondii]
Length = 782
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 116/178 (65%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS E +EYF+ ++RH F D D +I MAFSKK DERK WL +
Sbjct: 569 GLGTSLESEGREYFAALDRHMKSFHALQDGDSQYIDMAFSKKKADERKDWLQAFRPGTHL 628
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
++ + I +EF+NKELILFS DN RSIPS+ DG KPG RKVL+ C
Sbjct: 629 DPQI------------REIPISEFINKELILFSMADNVRSIPSILDGFKPGQRKVLYGCF 676
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN R E+KVAQL G ++EH+ YHHGE SL TI+ LAQNFVG+NN+NLLQPIG FG+
Sbjct: 677 KRNLRSEIKVAQLVGYISEHTGYHHGEGSLAQTIVGLAQNFVGANNLNLLQPIGLFGS 734
>gi|223634721|sp|Q01879.3|TOP2_PICGU RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
II
gi|190347620|gb|EDK39928.2| hypothetical protein PGUG_04026 [Meyerozyma guilliermondii ATCC
6260]
Length = 1400
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 116/178 (65%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS E +EYF+ ++RH F D D +I MAFSKK DERK WL +
Sbjct: 661 GLGTSLESEGREYFAALDRHMKSFHALQDGDSQYIDMAFSKKKADERKDWLQAFRPGTHL 720
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
++ + I +EF+NKELILFS DN RSIPS+ DG KPG RKVL+ C
Sbjct: 721 DPQI------------REIPISEFINKELILFSMADNVRSIPSILDGFKPGQRKVLYGCF 768
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN R E+KVAQL G ++EH+ YHHGE SL TI+ LAQNFVG+NN+NLLQPIG FG+
Sbjct: 769 KRNLRSEIKVAQLVGYISEHTGYHHGEGSLAQTIVGLAQNFVGANNLNLLQPIGLFGS 826
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 79/127 (62%), Gaps = 1/127 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H ++FVV +S +++ K+ GL + FKL +++++S+M AFD G + K+ +
Sbjct: 986 DMEEQH-GINIRFVVRLSKEEMDKSLRMGLLERFKLISSISLSNMVAFDPQGRIKKYSSA 1044
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
N+ILK++Y RLE Y +RKD + + +L+ QARFI + L I N+K+ EM+
Sbjct: 1045 NEILKDYYWARLELYQRRKDMMAENFQNQLTRLSEQARFIKLIIEKKLTIANKKRSEMVD 1104
Query: 339 ELIKRKY 345
+L K K+
Sbjct: 1105 DLKKLKF 1111
>gi|146414654|ref|XP_001483297.1| hypothetical protein PGUG_04026 [Meyerozyma guilliermondii ATCC
6260]
Length = 1400
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 116/178 (65%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS E +EYF+ ++RH F D D +I MAFSKK DERK WL +
Sbjct: 661 GLGTSLESEGREYFAALDRHMKSFHALQDGDSQYIDMAFSKKKADERKDWLQAFRPGTHL 720
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
++ + I +EF+NKELILFS DN RSIPS+ DG KPG RKVL+ C
Sbjct: 721 DPQI------------REIPISEFINKELILFSMADNVRSIPSILDGFKPGQRKVLYGCF 768
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN R E+KVAQL G ++EH+ YHHGE SL TI+ LAQNFVG+NN+NLLQPIG FG+
Sbjct: 769 KRNLRSEIKVAQLVGYISEHTGYHHGEGSLAQTIVGLAQNFVGANNLNLLQPIGLFGS 826
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 78/127 (61%), Gaps = 1/127 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H ++FVV + +++ K+ GL + FKL +++++S+M AFD G + K+ +
Sbjct: 986 DMEEQH-GINIRFVVRLLKEEMDKSLRMGLLERFKLISSISLSNMVAFDPQGRIKKYSSA 1044
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
N+ILK++Y RLE Y +RKD + + +L+ QARFI + L I N+K+ EM+
Sbjct: 1045 NEILKDYYWARLELYQRRKDMMAENFQNQLTRLSEQARFIKLIIEKKLTIANKKRLEMVD 1104
Query: 339 ELIKRKY 345
+L K K+
Sbjct: 1105 DLKKLKF 1111
>gi|183987568|gb|ACC65774.1| topoisomerase II [Sarcomyxa serotina]
Length = 696
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 125/178 (70%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +A++YFS+M +H I F + + D I +AFSKK DERK WL R
Sbjct: 463 GLGTSGDSDARDYFSHMSKHMIPFAPTQEGDKELIELAFSKKKADERKEWL--------R 514
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ + I Y+EF+NKELILFS DN RSIPS+ DGLKPG R+V++ C
Sbjct: 515 QLKPGTCLDH----RLEEIPYSEFINKELILFSMADNIRSIPSVADGLKPGQREVIWACF 570
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR ++E+KVAQL G V+EH+AYHHGE SL +TI++LAQ+FVGSNN+NLL P GQ+GT
Sbjct: 571 KRKLKKEIKVAQLVGYVSEHAAYHHGEASLAATIVSLAQDFVGSNNVNLLSPNGQYGT 628
>gi|357457981|ref|XP_003599271.1| DNA topoisomerase [Medicago truncatula]
gi|355488319|gb|AES69522.1| DNA topoisomerase [Medicago truncatula]
Length = 1567
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 123/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST +E +EYF ++++HR F + + D I +AFSKK ++RK W+ ++
Sbjct: 666 GLGTSTPQEGREYFKDLDKHRKDFIWENELDGNAIELAFSKKKAEDRKNWMRSF------ 719
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D+ K I+Y +FV+KELILFS D +RSIPS+ DGLKPG RK+LF
Sbjct: 720 --EPGTCRDH----EAKLISYKDFVDKELILFSRADLQRSIPSMVDGLKPGQRKILFCSF 773
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N +EVKV Q G V+EHSAYHHGEQSL STII +AQ+FVGSNNINLL P GQFGT
Sbjct: 774 KKNLSKEVKVGQFIGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLTPNGQFGT 831
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 78/133 (58%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D+K+ D V V M +K+ +GL K FKL +T++ S+M FD G + KFDT
Sbjct: 996 DFKQNGDDAIVDIEVRMKAEKVAAIMQEGLFKKFKLTSTISTSNMHLFDAEGKIKKFDTP 1055
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
QIL+EFY +RLEYY KRK Y+ L L L N+ RFI+ G++ + NRK+ E++
Sbjct: 1056 EQILEEFYPLRLEYYEKRKKYILANLERLLLILDNKVRFILGVVSGEIIVSNRKRTELLI 1115
Query: 339 ELIKRKYDSDPVK 351
EL ++ + P K
Sbjct: 1116 ELKQKGFTPIPKK 1128
>gi|328871183|gb|EGG19554.1| DNA topoisomerase II [Dictyostelium fasciculatum]
Length = 1574
Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 127/180 (70%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E KEYF+++ERH++ F++ DN D I MAF+KK D+RK WL +
Sbjct: 727 GLGTSKAEEGKEYFADIERHKLDFQWD-DNADDSIDMAFNKKRADDRKKWLNDF------ 779
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G YL K I +EF+NKELILFS D ERSIPS+ DGLK RK+L++C
Sbjct: 780 --EPGT---YLDQYGAKKIKISEFINKELILFSIADCERSIPSIVDGLKISQRKILYSCF 834
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN ++E++VAQL G V+EHSAYHHGE SL STIIN+AQ++VGSNNIN L P G FG+ L
Sbjct: 835 KRNLKKELRVAQLIGYVSEHSAYHHGEASLASTIINMAQDYVGSNNINTLYPSGSFGSRL 894
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 66/111 (59%), Gaps = 4/111 (3%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTN 279
++ Y T+ + FV+T + + + KVFKL T L ++M FD +GVL K+DTT+
Sbjct: 1108 FQNYSTEAVIHFVITT----VKPVDEIDVEKVFKLTTNLNETNMTLFDEHGVLRKYDTTS 1163
Query: 280 QILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIEN 330
I+K F+ +RL++Y RKDYL L E +L+N+ARFI +L I N
Sbjct: 1164 SIIKIFFTLRLQHYQMRKDYLISKLTEEFSRLSNRARFIQAVITKELVIAN 1214
>gi|378727259|gb|EHY53718.1| DNA topoisomerase II [Exophiala dermatitidis NIH/UT8656]
Length = 1661
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 129/178 (72%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS++A++YF+++++H F D + + I +AFSKK DERK WL R
Sbjct: 723 GLGTSTSEDAQQYFNDIDKHHKEFDVMKDEEASLIELAFSKKKADERKEWL--------R 774
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ + K I+Y++FVNKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 775 QFKAGTYLDH----SAKIISYSDFVNKELILFSMADNVRSIPSVVDGLKPGQRKVMYACF 830
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN ++++KVA+LAG V+ +AYHHGE SL TI+ LAQ+FVGSNN+NLL+P GQFGT
Sbjct: 831 KRNLKKDMKVAELAGLVSGMTAYHHGEASLQQTIVGLAQDFVGSNNVNLLEPSGQFGT 888
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 83/141 (58%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T TV FV+ + + A +GL + FKL ++A S++ AFD G +TK+
Sbjct: 1050 DYKDYNTHETVHFVIQLDEKHMKSAVEEGLVEKFKLTKSIATSNLVAFDPEGRITKYANV 1109
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I+ EFY RL+ YAKRK++L + +LTNQARF+ DG L I +KK ++A
Sbjct: 1110 EAIMDEFYRYRLQMYAKRKEWLLEDMNKTLRRLTNQARFVQMIIDGKLNISKKKKAVLVA 1169
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
EL K +D+ P KQN+
Sbjct: 1170 ELKKLGFDAYPKTVDASKQNE 1190
>gi|429965699|gb|ELA47696.1| hypothetical protein VCUG_00778 [Vavraia culicis 'floridensis']
Length = 1224
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 121/180 (67%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSK+AK+YFSN+++H F D + I +AF+KK D+RK WL +
Sbjct: 607 GLGTSTSKDAKQYFSNLDKHIKSFTLLTTEDKSLIDLAFNKKKADDRKLWLKNCVP---- 662
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G D+ + I +F+NKELILFS DN RSIPS+ DG KPG RKV++ C
Sbjct: 663 ----GTFLDH----SVHKIPIKDFINKELILFSMADNVRSIPSMVDGFKPGQRKVMYCCF 714
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN + E+KVAQL G VAEHSAYHHGE SL TII LA +FVGSNN+NLL+P GQFGT L
Sbjct: 715 KRNLKSEIKVAQLVGYVAEHSAYHHGEMSLQQTIIKLAHDFVGSNNVNLLEPAGQFGTRL 774
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 80/131 (61%), Gaps = 9/131 (6%)
Query: 216 ESNDYKEYHTDTTVKFVVTMSPDKLHKAEMDG-LHKVFKLQTTLAISSMCAFDRYGVLTK 274
E +++EYHT+ V F V+++ + G L K F L T ++ FDR+G + K
Sbjct: 926 EVKEFREYHTERNVHFEVSVT--------VSGELEKKFGLSTISIFNNFVCFDRHGKIKK 977
Query: 275 FDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKK 334
+D+ +ILKEFY++RLE+Y RK+YL L E KL N+ RFI E +G L + RKK
Sbjct: 978 YDSAEEILKEFYSIRLEFYNLRKEYLLKTLEEELRKLENKVRFIREVVNGTLVVSKRKKA 1037
Query: 335 EMIAELIKRKY 345
++IAEL +++Y
Sbjct: 1038 DIIAELEQKEY 1048
>gi|66826863|ref|XP_646786.1| DNA topoisomerase II [Dictyostelium discoideum AX4]
gi|74997376|sp|Q55BP5.1|TOP2_DICDI RecName: Full=Probable DNA topoisomerase 2; AltName: Full=DNA
topoisomerase II
gi|60474622|gb|EAL72559.1| DNA topoisomerase II [Dictyostelium discoideum AX4]
Length = 1521
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 124/179 (69%), Gaps = 14/179 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYS-GDNDDAHIRMAFSKKLVDERKTWLTTWMEECR 69
GLGTST E KEYFS++ERH+I F++ G ND +I +AFSK D+RK W+ +E
Sbjct: 683 GLGTSTPGEGKEYFSDLERHKIDFEWDEGAND--NIELAFSKSRADDRKKWMAEHIEGT- 739
Query: 70 RRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
+L K +TY++F+NKEL+LFS D ERSIP++ DGLK RK L++C
Sbjct: 740 ----------FLEQFGVKKLTYSDFINKELVLFSIADCERSIPNIVDGLKTSHRKTLYSC 789
Query: 130 LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN ++E+KVAQL G V+EHSAYHHGE SL STI+ +AQ FVGSNNINLL P G +GT
Sbjct: 790 FKRNLKKEIKVAQLIGYVSEHSAYHHGEASLYSTIVGMAQEFVGSNNINLLNPAGSYGT 848
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 76/127 (59%), Gaps = 4/127 (3%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTN 279
Y Y +++T+ F++ D + + + KVFKL +T+ ++M FD G + +F TT
Sbjct: 1056 YTNYSSESTIHFII----DTIQPVDEINIEKVFKLVSTINETNMVVFDEEGRIQRFATTT 1111
Query: 280 QILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAE 339
+ + F+ +R+++Y RKD+L L E +L+N+ARFI+ + +L I N KK ++I +
Sbjct: 1112 ALQEHFFPLRIKHYQMRKDFLSERLSEEYSRLSNKARFILAVVNKELVISNVKKVDLINK 1171
Query: 340 LIKRKYD 346
L + K+D
Sbjct: 1172 LKEMKFD 1178
>gi|145491451|ref|XP_001431725.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398830|emb|CAK64327.1| unnamed protein product [Paramecium tetraurelia]
Length = 1274
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/179 (56%), Positives = 127/179 (70%), Gaps = 14/179 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +EA+EYF N+ H I F+Y GD+DD+ I + F+KK ++RK WL + +
Sbjct: 587 GLGTSDDQEAQEYFKNLRTHTIQFRYDGDDDDSSIDLCFNKKKANDRKQWLAQYNHD--- 643
Query: 71 RKEMGIGEDYLYTKTTKA-ITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
LY TK+ + Y+EF++KELI FS DN RSIPSL DGLKPG RKVLF C
Sbjct: 644 ----------LYVDHTKSELGYSEFIHKELIHFSMADNIRSIPSLMDGLKPGQRKVLFAC 693
Query: 130 LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN ++E+KV QL G +AEHSAYHHG+ SL+STII +AQNFVGSNNINLL P GQFG+
Sbjct: 694 FKRNLKQEIKVVQLGGYIAEHSAYHHGDLSLVSTIIGMAQNFVGSNNINLLLPKGQFGS 752
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 70/127 (55%), Gaps = 2/127 (1%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +EYHT + F + M + +++ + FKL T + S+M FD + K++
Sbjct: 913 DLREYHTKYKIHFEIQMVDGFV--SDLKNPLEYFKLSTPASCSNMVLFDSNNKIKKYECV 970
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ I++EFY VRL++Y KRK+YL L E L N+ +FI +++I N KK +++
Sbjct: 971 SDIMEEFYQVRLQFYHKRKEYLVSKLDREVQLLDNKLKFIKMVISEEIQIRNVKKIDLVK 1030
Query: 339 ELIKRKY 345
+L K +
Sbjct: 1031 QLDKNGF 1037
>gi|440492872|gb|ELQ75404.1| DNA topoisomerase type II, partial [Trachipleistophora hominis]
Length = 1474
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 120/180 (66%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSK+AK+YFSN+E+H F D + I +AF+KK D+RK WL +
Sbjct: 637 GLGTSTSKDAKQYFSNLEKHVKSFTLLTTEDQSLIDLAFNKKKADDRKLWLKNCVP---- 692
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G D+ + I +F+NKELILFS DN RSIPS+ DG KPG RKV++ C
Sbjct: 693 ----GTFLDH----SAHKIPIRDFINKELILFSMADNVRSIPSVVDGFKPGQRKVMYCCF 744
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN + E+KVAQL G VAEHSAYHHGE SL TII LA +FVGSNNINLL P GQFGT L
Sbjct: 745 KRNLKSEIKVAQLVGYVAEHSAYHHGEVSLQQTIIKLAHDFVGSNNINLLMPEGQFGTRL 804
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 78/127 (61%), Gaps = 7/127 (5%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
+++EYHT+ +V F V ++ E+D K F L + ++ FDR+G + K+++
Sbjct: 959 EFREYHTERSVHFEVNLAVS----GEID---KKFSLSSINIFNNFVCFDRHGKIKKYESA 1011
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL+EFY++RLE+Y RK ++ L + +L N+ RFI E +G L + RKK ++IA
Sbjct: 1012 EEILREFYSIRLEFYNLRKAHMLNTLEEQLKRLHNKVRFIKEVVNGTLVVSKRKKTDIIA 1071
Query: 339 ELIKRKY 345
EL +++Y
Sbjct: 1072 ELERKEY 1078
>gi|219121760|ref|XP_002181228.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407214|gb|EEC47151.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1143
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/181 (55%), Positives = 120/181 (66%), Gaps = 16/181 (8%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS EAKEYFSN++ H +L +D I M F K V++RK WL
Sbjct: 597 GLGTSTSAEAKEYFSNLDLHEVLPDTVQSGNDL-IDMVFRKNRVEDRKQWLN-------- 647
Query: 71 RKEMGIGEDYL--YTKTTK-AITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLF 127
I +D Y++ +K + Y+EF+N+E ILFS DNERSIP L DG KP RK+LF
Sbjct: 648 ----AIAKDTFLNYSEVSKEGVMYSEFINREYILFSKSDNERSIPHLLDGFKPSQRKILF 703
Query: 128 TCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFG 187
C KR + E+KVAQL G VAEHSAYHHGE SL +TI+N+AQNF GSNNINLL P GQFG
Sbjct: 704 ACFKRKLKGEIKVAQLTGYVAEHSAYHHGEASLQATIVNMAQNFCGSNNINLLTPSGQFG 763
Query: 188 T 188
T
Sbjct: 764 T 764
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
Query: 216 ESNDYKEYHTDTTVKFVVTMSPDKLHKAEMD--GLHKVFKLQTTLAISSMCAFDRYGVLT 273
E D+ E HT+TTV F + +K+ + E + GL FKL +L+ S+M FD G +T
Sbjct: 930 EIKDFTENHTETTVSFTIIAEKEKIDEFEKEKAGLMGKFKLTGSLSTSNMTLFDERGRIT 989
Query: 274 KFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKK 333
+F+ I+ FY +RL++Y KRK L L E KL+N+ARF+ E C +L + NRK+
Sbjct: 990 RFEDPESIMNAFYDIRLDFYDKRKRLLVKKLKEEQRKLSNKARFVEEVCRVELVVNNRKR 1049
Query: 334 KEMIAELIKRKYDS 347
++++ EL R Y++
Sbjct: 1050 QDILHELRNRGYET 1063
>gi|183987564|gb|ACC65772.1| topoisomerase II [Pleurotus abalonus]
Length = 692
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 124/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ +A+EYF M +H I F + D I +AFSKK D+RK WL R
Sbjct: 459 GLGTSSDADAREYFGRMSKHMIPFATMEEGDRDLIDLAFSKKKADDRKDWL--------R 510
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ + I Y++F+NKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 511 QFKPGTYLDH----NIEEIPYSDFINKELILFSMADNIRSIPSVADGLKPGQRKVIWGCF 566
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR ++E+KVAQL G ++EH+AYHHGE SL +TI+NLAQN+VGSNNINLL+P GQ+GT
Sbjct: 567 KRKLKKEIKVAQLVGYISEHAAYHHGETSLAATIVNLAQNYVGSNNINLLKPNGQYGT 624
>gi|443921924|gb|ELU41451.1| DNA topoisomerase 2 [Rhizoctonia solani AG-1 IA]
Length = 1447
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 124/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +A+EYF ME+H I F + + + I MAF+KK D+RK WL R
Sbjct: 681 GLGTSKDSDAREYFGAMEKHMIPFAKTEEGERELIDMAFNKKKADDRKDWL--------R 732
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ + + ITY++F+N+ELILFS DN RSIPS+ DGLKPG RKV+F
Sbjct: 733 QFKPGTFIDH----SVQEITYSDFINRELILFSMADNIRSIPSVVDGLKPGQRKVIFGTF 788
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR + E+KVAQL G ++E +AYHHGEQSL TI+NLAQNFVGSNNINLL+P GQFGT
Sbjct: 789 KRKLKNEIKVAQLVGYISEKTAYHHGEQSLTMTIVNLAQNFVGSNNINLLKPEGQFGT 846
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 88/144 (61%), Gaps = 4/144 (2%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY E+HT +V F +T++ L KAE +G K FKL ++ S+M FD G + K+++
Sbjct: 1014 DYHEHHTTRSVYFELTVAEKDLEKAETEGFEKFFKLVAQISTSNMICFDANGKIKKYNSP 1073
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL+EFYA+RL YY KRK +L L + KL+NQARF+ +L + N+KK ++ A
Sbjct: 1074 EEILEEFYALRLSYYQKRKQHLCDELERQYEKLSNQARFVNMIIKKELVVSNKKKADLCA 1133
Query: 339 ELIKRKYDSDPVKSWKMKQNKENA 362
EL + K+ P K+++ KE+
Sbjct: 1134 ELRELKFRPFP----KVRKAKESG 1153
>gi|70568834|dbj|BAE06274.1| topoisomerase II [Scutellaria baicalensis]
Length = 1469
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 123/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST +EA EYFS++ +H F Y DD I +AFSKK ++ RK WL R
Sbjct: 619 GLGTSTDQEAMEYFSDLGKHEKDFVYVDGEDDDAIELAFSKKKIEARKGWL--------R 670
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G +L + + I Y +FV+KELILFS D +RSIPS+ DGLKPG RK+LF
Sbjct: 671 QFEPGT---FLDDRDSH-IKYRDFVHKELILFSIADVQRSIPSMVDGLKPGQRKILFCSF 726
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN RE KVAQ +G V+EHSAYHHGEQSL TII +AQ++VGSNNINLL PIGQFGT
Sbjct: 727 KRNFVREAKVAQFSGYVSEHSAYHHGEQSLAGTIIGMAQDYVGSNNINLLLPIGQFGT 784
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 79/131 (60%)
Query: 221 KEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQ 280
++Y V F+V M P+KL A+ +GL K FKL T+++ +M FD GV+ K+DT Q
Sbjct: 954 RDYSGSELVNFLVGMKPEKLEAAKREGLLKKFKLTTSISTCNMHLFDSKGVIKKYDTPEQ 1013
Query: 281 ILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAEL 340
IL+EF+ +RLE Y KRK L +L + LK N+ RFI +G + + NRK+ ++ EL
Sbjct: 1014 ILEEFFYIRLELYEKRKKVLLDILEHDMLKCDNKYRFIRCVVEGSIIVSNRKRTDVFREL 1073
Query: 341 IKRKYDSDPVK 351
++ + P K
Sbjct: 1074 KEKGFTPFPKK 1084
>gi|342319562|gb|EGU11509.1| DNA topoisomerase 2 [Rhodotorula glutinis ATCC 204091]
Length = 1591
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 98/180 (54%), Positives = 120/180 (66%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS + +AK+YFS+M RHR+ FK D A I MAF+KK D+RK WL ++
Sbjct: 759 GLGTSDTNDAKKYFSDMNRHRLPFKELTPEDRALIDMAFNKKKADDRKEWLRGFVP---- 814
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G D+ + +F+NKELILFS DN RSIPS+ DG KPG RKVLF C
Sbjct: 815 ----GTYMDH----DVDEVPIKDFINKELILFSMADNIRSIPSVVDGFKPGQRKVLFGCF 866
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR + E+KV QL+G ++EHSAYHHG+ SL TI+ LAQNFVGSNNIN+L P GQFGT L
Sbjct: 867 KRKLKNEIKVGQLSGYISEHSAYHHGDASLQGTIVGLAQNFVGSNNINVLDPNGQFGTRL 926
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 81/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTDTTV FVVT++ E DGL KVFK+ + L S+M FD G + K+ T
Sbjct: 1087 DYKEYHTDTTVHFVVTLTTAGKEAIEKDGLEKVFKVTSKLNTSNMVCFDPTGKIKKYATA 1146
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I+ +FY VRLE+Y KRK +L L +L+NQARFI D L + NRK+ +++A
Sbjct: 1147 EDIVSDFYDVRLEFYHKRKKHLVSELELVHDRLSNQARFIKMIIDKQLVLSNRKRADIVA 1206
Query: 339 ELIKRKYDSDP 349
EL K+ + P
Sbjct: 1207 ELRKKGFRPFP 1217
>gi|298712279|emb|CBJ26730.1| DNA topoisomerase II [Ectocarpus siliculosus]
Length = 1809
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 102/182 (56%), Positives = 127/182 (69%), Gaps = 13/182 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIR-MAFSKKLVDERKTWLTTWMEECR 69
GLGTST+KEAKEYF+ ++ H++ F++ D+ D + MAFSKK V++RK WL
Sbjct: 623 GLGTSTAKEAKEYFAALDTHQLEFEWQDDDRDDDLIDMAFSKKRVEDRKEWL-------- 674
Query: 70 RRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
R + G DY +++TY F+NKELILFS DN+RSIP L DG KP RKVLF+C
Sbjct: 675 RGFKAGTHADY----NVESVTYESFINKELILFSMEDNKRSIPCLVDGFKPSQRKVLFSC 730
Query: 130 LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTF 189
KRN ++E+KV QLAG V+EHSAYHHGE SL TI +AQNF GSNN+NLL P GQFGT
Sbjct: 731 FKRNLKKEIKVVQLAGYVSEHSAYHHGETSLNGTITAMAQNFTGSNNLNLLTPGGQFGTR 790
Query: 190 LF 191
L
Sbjct: 791 LM 792
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 84/129 (65%), Gaps = 1/129 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEM-DGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
D+KE HTDTTV F VTMS + L E DGL+K FKL+++++ ++M FD+ G L ++++
Sbjct: 982 DFKENHTDTTVHFTVTMSMEDLDALEKGDGLYKFFKLESSVSTNNMVLFDQDGHLERYES 1041
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
I++EF +R E+Y +RK L L +E KL N+ RFI+ + +++ NRKK E++
Sbjct: 1042 PQHIMEEFITLRSEFYGRRKTSLLSKLQSEWSKLDNKVRFILAVVEDRMQVNNRKKSELL 1101
Query: 338 AELIKRKYD 346
+L + YD
Sbjct: 1102 EQLKREGYD 1110
>gi|387593505|gb|EIJ88529.1| DNA topoisomerase II [Nematocida parisii ERTm3]
gi|387597159|gb|EIJ94779.1| DNA topoisomerase II [Nematocida parisii ERTm1]
Length = 1182
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 126/180 (70%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+K+AK+YFSN++ H F D I +AFSKK ++ RK WL
Sbjct: 583 GLGTSTAKDAKDYFSNLDFHIKEFIPMDSTDRDKIELAFSKKRIESRKVWL--------- 633
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
KE G YL + +AI+ F+++ELI FS DN RSIP++ DG+KPG RK+++ C
Sbjct: 634 -KEFVPGT-YLDNRV-QAISIKNFIDRELIHFSLADNIRSIPNVIDGMKPGQRKIIYCCF 690
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR + E+KVAQLAG V+EHSAYHHGEQSL STI+NLAQ++VGSNNI LLQPIGQFGT L
Sbjct: 691 KRQLKSEIKVAQLAGYVSEHSAYHHGEQSLCSTIVNLAQDYVGSNNIPLLQPIGQFGTRL 750
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 19/161 (11%)
Query: 198 LSGAVVNALDFGSGGWR----------FESND---YKEYHTDTTVKFVVTMSPDKLHKAE 244
L +N L+ G W ES D ++EY+TDT V F V +S K++
Sbjct: 871 LETGKINILELPIGTWTQNYKDFLETLIESGDIKDFREYNTDTKVYFEVIVSKQKVN--- 927
Query: 245 MDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVL 304
+ KVFKL + ++ ++M AF+ GVL K+ + ++ILKEFY VR + Y +RKD+L L
Sbjct: 928 ---VPKVFKLSSQISTANMVAFNSKGVLQKYTSPSEILKEFYPVRRDLYVRRKDFLLKKL 984
Query: 305 GAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKY 345
E L N+ RFI E L+I RK +++ EL ++Y
Sbjct: 985 NVEMTILENKVRFIKEVVADTLKIVKRKSADIVKELTDKEY 1025
>gi|448515221|ref|XP_003867280.1| Top2 DNA topoisomerase II [Candida orthopsilosis Co 90-125]
gi|380351619|emb|CCG21842.1| Top2 DNA topoisomerase II [Candida orthopsilosis]
Length = 1473
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 131/208 (62%), Gaps = 23/208 (11%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST EA+EYF+ ++RH F D +I +AFSKK DERK WL ++ +
Sbjct: 694 GLGTSTPMEAREYFTALDRHLKRFHALQGEDSNYIDLAFSKKKADERKEWLQNFVPGNQL 753
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E+ I +EF+NKELILFS DN RSIPS+ DGLKPG RKVLF C
Sbjct: 754 DPELN------------EIPISEFINKELILFSMSDNIRSIPSVLDGLKPGQRKVLFGCF 801
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN + E+KVAQLA V+E++ YHHGE SL+ TII LAQNFVGSNNIN+L+P G FG+
Sbjct: 802 KRNLKSEIKVAQLAAYVSENTGYHHGEVSLVQTIIGLAQNFVGSNNINILKPNGAFGSRA 861
Query: 191 ----------FIF-ESTNLSGAVVNALD 207
+IF E +++ A+ N LD
Sbjct: 862 TGGKDAAAARYIFTELNDITKAIFNPLD 889
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 90/139 (64%), Gaps = 6/139 (4%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E+HT T ++F+V ++ ++ KA GL + FKL +++++++M AFD YG + K++
Sbjct: 1021 DMEEHHT-TNIRFIVKLNDAEMEKALKVGLLEKFKLTSSVSLANMVAFDPYGRIKKYNDV 1079
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ILK+FY VRLEYY KRK+++ +L + L ++ QARF+ + +L + N+KKK++I
Sbjct: 1080 FEILKDFYYVRLEYYEKRKNHMLEMLQRKLLMISEQARFVKMIIEKELSVANKKKKDLIE 1139
Query: 339 -----ELIKRKYDSDPVKS 352
E K D PV+S
Sbjct: 1140 LLEQHEFTKFTKDGKPVES 1158
>gi|183987566|gb|ACC65773.1| topoisomerase II [Pleurotus pulmonarius]
Length = 692
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 123/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ +A+EYFS M +H I F + + A I +AFSKK D+RK WL R
Sbjct: 459 GLGTSSDADAREYFSQMGKHMIPFATMEEEERALIDLAFSKKKADDRKEWL--------R 510
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ I +T+F+NKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 511 QFKPGTYLDH----NIDEIPFTDFINKELILFSMADNIRSIPSVADGLKPGQRKVIWGCF 566
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR ++E+KVAQL G ++EH+AYHHGE S STI+NLAQN+VGSNNINLL P GQ+GT
Sbjct: 567 KRKLKKEIKVAQLVGYISEHAAYHHGEMSSSSTIVNLAQNYVGSNNINLLSPNGQYGT 624
>gi|183987574|gb|ACC65777.1| topoisomerase II [Lentinus tuber-regium]
Length = 692
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 124/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ +A+EYFS+M +H I F + + I +AFSKK D+RK WL R
Sbjct: 459 GLGTSSDADAREYFSHMSKHMIPFATMEEGERELIDLAFSKKKADDRKEWL--------R 510
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ G D+ I +++F+NKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 511 HFKPGTYLDH----NMDEIPFSDFINKELILFSMADNIRSIPSVADGLKPGQRKVVWGCF 566
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR ++E+KVAQL G ++EH+AYHHGE SL +TIINLAQN+VGSNNINLL+P GQ+GT
Sbjct: 567 KRKLKKEIKVAQLVGYISEHAAYHHGEASLAATIINLAQNYVGSNNINLLKPNGQYGT 624
>gi|32478664|gb|AAP83584.1| DNA-topoisomerase II [Physarum polycephalum]
Length = 1498
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 122/180 (67%), Gaps = 13/180 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+S+EA+EYF ++ERHRI FK+ D + MAF K +RKTW
Sbjct: 944 GLGTSSSQEAREYFKDLERHRIEFKWD-DTTTTKMDMAFGKDETAQRKTWAA-------- 994
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
I +D+ T K +TY++FV+KEL+ F N R+IPS+ DGLKPG RKVL+
Sbjct: 995 ----AIPKDWFVDYTVKNLTYSDFVDKELVQFCRAANARAIPSVVDGLKPGQRKVLYASF 1050
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR +E+KVAQLAG VAEH+AYHHGE+SL TI+N+AQ+FVG+NN+ LL P GQFGT L
Sbjct: 1051 KRGLTQEMKVAQLAGYVAEHTAYHHGEESLHGTIVNMAQDFVGANNLPLLLPSGQFGTRL 1110
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 71/127 (55%), Gaps = 4/127 (3%)
Query: 219 DYKEYHTDTTVKFVVTM---SPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKF 275
D+ EY+TD V F VT + K L K+ +L++T + M FDR+G + ++
Sbjct: 1271 DFSEYNTDQKVDFEVTFPRGAEAKPIPQNAQDLLKLLRLESTFFMK-MVLFDRHGAIKEY 1329
Query: 276 DTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKE 335
I+++F+ VR+EYYAKRK E VL EA +L ++ +F+ G L++ R K E
Sbjct: 1330 MDPLDIIRDFFEVRMEYYAKRKAAREKVLENEAKRLGDKLKFVKLVISGSLKLFGRSKAE 1389
Query: 336 MIAELIK 342
+ +L+K
Sbjct: 1390 LRQDLVK 1396
>gi|10281022|dbj|BAB13752.1| type II DNA topoisomerase [Candida parapsilosis]
Length = 779
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 131/208 (62%), Gaps = 23/208 (11%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST EA+EYF+ ++RH F D +I +AFSKK DERK WL ++ +
Sbjct: 566 GLGTSTPMEAREYFTALDRHLKRFHALQGEDSNYIDLAFSKKKADERKEWLQNFVPGNQL 625
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E+ I +EF+NKELILFS DN RSIPS+ DGLKPG RKVLF C
Sbjct: 626 DPEL------------NEIPISEFINKELILFSMSDNIRSIPSVLDGLKPGQRKVLFGCF 673
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN + E+KVAQLA V+E++ YHHGE SL+ TII LAQNFVGSNNIN+L+P G FG+
Sbjct: 674 KRNLKSEIKVAQLAAYVSENTGYHHGEVSLVQTIIGLAQNFVGSNNINILKPNGAFGSRA 733
Query: 191 ----------FIF-ESTNLSGAVVNALD 207
+IF E +++ A+ N LD
Sbjct: 734 TGGKDAAAARYIFTELNDITKAIFNPLD 761
>gi|302673662|ref|XP_003026517.1| hypothetical protein SCHCODRAFT_17796 [Schizophyllum commune H4-8]
gi|300100200|gb|EFI91614.1| hypothetical protein SCHCODRAFT_17796 [Schizophyllum commune H4-8]
Length = 1494
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 120/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +A++YFS+ E+H I F + + D I +AFSKK D+RK WL T C+
Sbjct: 679 GLGTSKDSDARDYFSHTEKHVIPFAQTQEGDRELIDLAFSKKKADDRKEWLRT----CK- 733
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
I ++F+NKELILFS DN RSIPS+ DGLKPG RK+++ C
Sbjct: 734 -------PGTFLNHDVDEIPISDFINKELILFSMADNIRSIPSVADGLKPGQRKIIWGCF 786
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR ++E+KVAQL G V+EH+AYHHGEQSL TI+NLAQ++VGSNNINLL P GQ+GT
Sbjct: 787 KRKLKKEIKVAQLVGYVSEHAAYHHGEQSLTMTIVNLAQDYVGSNNINLLMPNGQYGT 844
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 86/134 (64%), Gaps = 2/134 (1%)
Query: 216 ESNDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKF 275
E+ Y E+H +T V F++TMS +L KAE G + FKL + ++ ++M AF+ G +TK+
Sbjct: 1001 EAPTYTEHHDNTNVHFIITMSATELKKAEEQGFVEYFKLTSKISTANMIAFNFDGKITKY 1060
Query: 276 DTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKE 335
D+ +I++EFY RL YY KRKDYL L + +L NQARFI D L + NRKK +
Sbjct: 1061 DSPEEIVEEFYPQRLMYYQKRKDYLADELQVQLSRLNNQARFIQMIVDRQLIVSNRKKVD 1120
Query: 336 MIAELIKRKYDSDP 349
++A+L RK+D P
Sbjct: 1121 IVADL--RKHDFRP 1132
>gi|255553522|ref|XP_002517802.1| DNA topoisomerase II, putative [Ricinus communis]
gi|223543074|gb|EEF44609.1| DNA topoisomerase II, putative [Ricinus communis]
Length = 1212
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 123/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGT+ KE +YF ++++H+ F + + D I +AFSKK VDERK WL R
Sbjct: 325 GLGTNDKKEGMQYFRDIDKHQKDFVWMNEEDGTAIELAFSKKKVDERKNWL--------R 376
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ G +L K K I Y++F+NKELILFS D +RSIPS+ DGLKP RK+LF+C
Sbjct: 377 HFQPGT---HLEQKN-KLIKYSDFINKELILFSVADLQRSIPSMVDGLKPAQRKILFSCF 432
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN +++KV QL G V+E SAYHHGEQSL STI+ +AQNFVGSNNINLL P GQFGT
Sbjct: 433 KRNLVKDLKVVQLQGYVSEQSAYHHGEQSLQSTIVGMAQNFVGSNNINLLAPKGQFGT 490
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 83/131 (63%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D+++Y D +V F V +S +K+ + + +GL K FKL TT++ S+M FD GV+ K+D+
Sbjct: 663 DFRKYGDDVSVCFEVLLSEEKMKQVKDEGLLKKFKLATTISTSNMHLFDPKGVIKKYDSP 722
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL+EF +R E Y KRK++ L EAL L N+ RFI+ G++ + NRK+ E++
Sbjct: 723 EEILEEFVHLRFELYEKRKNFKLASLEMEALILENKVRFILGVVTGEIIVNNRKRAELLL 782
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 783 ELRQKGFTPFP 793
>gi|269860440|ref|XP_002649941.1| DNA topoisomerase II [Enterocytozoon bieneusi H348]
gi|220066628|gb|EED44103.1| DNA topoisomerase II [Enterocytozoon bieneusi H348]
Length = 1159
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 101/181 (55%), Positives = 124/181 (68%), Gaps = 12/181 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+ +AK+YF+N++ H F D I +AF+KK D+RK W+
Sbjct: 579 GLGTSTTDDAKQYFNNLKLHVKTFIPVELEDRELIDLAFNKKKADDRKEWIG-------- 630
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R E G D ++ IT +FVNKELILFS DN RSIPS+ DGLKPG RKV+F+C
Sbjct: 631 RFEPGTFLD----QSMSNITVRDFVNKELILFSMADNIRSIPSVIDGLKPGQRKVIFSCF 686
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN + E+KVAQL G V+EHSAYHHGE SL +TIINLA +FVGSNNINLL P+GQFG+ L
Sbjct: 687 KRNLKTEIKVAQLVGYVSEHSAYHHGEASLAATIINLAHDFVGSNNINLLLPLGQFGSRL 746
Query: 191 F 191
Sbjct: 747 L 747
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 25/167 (14%)
Query: 192 IFESTNLSGAVVNALDFGSGGWRFESNDY-------------KEYHTDTTVKFVVTMSPD 238
+FE N++ +N ++ G W +Y K+Y TD T+ ++ M+ +
Sbjct: 865 VFE--NINKKEINVVELPIGVWTQAYKEYLDQAIADNVIKSFKDYSTDKTIDILIHMNNN 922
Query: 239 KLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKD 298
+ KL T+++ ++M FDR G + K+ T +ILK+FY VRLE+Y KRK
Sbjct: 923 EFSS----------KLTTSISTNNMVCFDRNGKIKKYHNTLEILKDFYEVRLEFYNKRKI 972
Query: 299 YLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKY 345
Y +L E KL N+ RFI G + I R E+I EL ++++
Sbjct: 973 YRLKLLADELNKLKNKVRFIEGVITGSIIITQRPLNEIILELERKEF 1019
>gi|400603233|gb|EJP70831.1| topoisomerase IV [Beauveria bassiana ARSEF 2860]
Length = 1602
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 98/186 (52%), Positives = 125/186 (67%), Gaps = 12/186 (6%)
Query: 5 HDVMIAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTW 64
H + GLG+S++++A+ YF+N+++H F+ + +AFSKK D RK WL +
Sbjct: 702 HSKYLKGLGSSSNEDAQVYFTNLDKHLKEFEVMQPEEAQLFDLAFSKKKADARKEWLGNF 761
Query: 65 MEECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRK 124
+ YL TKAITYT+FVNKELILFS DN RSIPS+ DGLKPG RK
Sbjct: 762 VPGT-----------YL-DHGTKAITYTDFVNKELILFSMADNMRSIPSIADGLKPGQRK 809
Query: 125 VLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIG 184
VLF+C K+N ++ KV +LAG ++E SAYHHGEQSL TII LAQ FVGSNNINLL+P G
Sbjct: 810 VLFSCFKKNVTKDKKVVELAGYISEQSAYHHGEQSLQQTIIGLAQTFVGSNNINLLEPSG 869
Query: 185 QFGTFL 190
FG+ L
Sbjct: 870 NFGSRL 875
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 80/142 (56%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE++ TV F + + + K +GL + FKLQ +A S++ AFD G + K+D
Sbjct: 1045 DYKEFNDHNTVHFEIMVDEKFMPKVLEEGLLERFKLQKQVATSNLVAFDMQGRIRKYDKV 1104
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I++EFY RL+ Y++RK Y V + KL NQARF+ E G L + +KK+ ++
Sbjct: 1105 EDIMEEFYHYRLDMYSERKKYWLNVYHRDYRKLKNQARFVQEIISGVLVVGKKKKQALVT 1164
Query: 339 ELIKRKYDSDPVKSWKMKQNKE 360
EL +RKY+ P K +E
Sbjct: 1165 ELRERKYEGFPPSKPGAKAEEE 1186
>gi|336364306|gb|EGN92666.1| hypothetical protein SERLA73DRAFT_172653 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1484
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 123/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ +A+ YFSNM +H I F + D D I +AFSKK DERK WL R
Sbjct: 687 GLGTSSDSDARLYFSNMAKHMIPFAATQDGDKELIELAFSKKKADERKEWL--------R 738
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ I+Y++F+N+ELILFS DN RSIP+L DGLKPG RKV++ C
Sbjct: 739 QFKAGTYLDH----NIDEISYSDFINRELILFSMADNIRSIPALADGLKPGQRKVIWGCF 794
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR ++E+KVAQL G ++E +AYHHGE SL TI+NLAQ++VGSNN+NLL P GQ+GT
Sbjct: 795 KRKLKKEIKVAQLVGYISEVAAYHHGEASLTMTIVNLAQDYVGSNNVNLLLPNGQYGT 852
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 81/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE+H + + FV+TMSP L KAE GL + FKL + + S+M F+ G + K+ T
Sbjct: 1013 DYKEHHDNVNIHFVITMSPKDLEKAEEQGLTEFFKLTSKINTSNMICFNLDGKIQKYQTP 1072
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I++EF+ RL Y RKDYL L + +L+NQARF+ D +L + NRKK ++I+
Sbjct: 1073 EEIIEEFFPKRLACYQSRKDYLANELQTQFERLSNQARFVKMIVDKELIVANRKKADIIS 1132
Query: 339 ELIKRKYDSDP 349
EL K K+ P
Sbjct: 1133 ELRKLKFRPFP 1143
>gi|336378314|gb|EGO19472.1| hypothetical protein SERLADRAFT_453445 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1467
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 123/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ +A+ YFSNM +H I F + D D I +AFSKK DERK WL R
Sbjct: 670 GLGTSSDSDARLYFSNMAKHMIPFAATQDGDKELIELAFSKKKADERKEWL--------R 721
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ I+Y++F+N+ELILFS DN RSIP+L DGLKPG RKV++ C
Sbjct: 722 QFKAGTYLDH----NIDEISYSDFINRELILFSMADNIRSIPALADGLKPGQRKVIWGCF 777
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR ++E+KVAQL G ++E +AYHHGE SL TI+NLAQ++VGSNN+NLL P GQ+GT
Sbjct: 778 KRKLKKEIKVAQLVGYISEVAAYHHGEASLTMTIVNLAQDYVGSNNVNLLLPNGQYGT 835
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 81/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE+H + + FV+TMSP L KAE GL + FKL + + S+M F+ G + K+ T
Sbjct: 996 DYKEHHDNVNIHFVITMSPKDLEKAEEQGLTEFFKLTSKINTSNMICFNLDGKIQKYQTP 1055
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I++EF+ RL Y RKDYL L + +L+NQARF+ D +L + NRKK ++I+
Sbjct: 1056 EEIIEEFFPKRLACYQSRKDYLANELQTQFERLSNQARFVKMIVDKELIVANRKKADIIS 1115
Query: 339 ELIKRKYDSDP 349
EL K K+ P
Sbjct: 1116 ELRKLKFRPFP 1126
>gi|301120494|ref|XP_002907974.1| DNA topoisomerase 2 DNA gyrase B [Phytophthora infestans T30-4]
gi|262103005|gb|EEY61057.1| DNA topoisomerase 2 DNA gyrase B [Phytophthora infestans T30-4]
Length = 1329
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 97/180 (53%), Positives = 122/180 (67%), Gaps = 11/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS E +EYFS+++ H + F +SGDND + M FSK +RK WL
Sbjct: 599 GLGTSTSAEGREYFSDLDNHLVDFHWSGDNDGDALDMVFSKARAADRKAWLLNEYSPA-- 656
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
YL T ++ ++TY +FVN+ELI FS+ DN+RS+PS+ DGLK RKVLF C+
Sbjct: 657 --------SYLDT-SSGSVTYQDFVNRELIQFSHADNQRSLPSVVDGLKISQRKVLFACM 707
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR EVKVAQLAG +EH+AYHHGE SL STI+N+AQ+FVGS N+ LL P GQFGT L
Sbjct: 708 KRKLTSEVKVAQLAGYCSEHTAYHHGEASLHSTIVNMAQDFVGSKNLPLLFPSGQFGTRL 767
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHK-----------AEMDGLHKVFKLQTTLAISSMCAFDR 268
+ E+H++ V+F ++M+ L K + + L K+ +L+ L+ S+M AF+
Sbjct: 933 FSEHHSERDVRFDISMTRSDLAKYAEDAAENCDAGDSEALVKLLRLEAPLSTSNMHAFNA 992
Query: 269 YGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLR- 327
G L K++T+ +L++FY VR + Y+KRK +LE E L+L+N+ RFI E G L+
Sbjct: 993 DGQLVKYETSEDVLRDFYGVRRKLYSKRKRHLEQRQTKEVLRLSNRIRFIQEVSTGSLQK 1052
Query: 328 -IENRKKKEMIAELIK 342
+ R K + +L+K
Sbjct: 1053 ILRERIPKAELIDLLK 1068
>gi|348677326|gb|EGZ17143.1| hypothetical protein PHYSODRAFT_559851 [Phytophthora sojae]
Length = 1340
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 98/180 (54%), Positives = 122/180 (67%), Gaps = 11/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS E +EYFS+++ H + F +SGD+D + M FSK +RK WL
Sbjct: 602 GLGTSTSAEGREYFSDLDNHLVDFHWSGDSDGDALDMVFSKARAADRKAWLLNEYSP--- 658
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ YL T ++ +TY +FVN+ELI FS+ DN RS+PS+ DGLK RKVLF CL
Sbjct: 659 -------DSYLDT-SSGDVTYRDFVNRELIQFSHADNARSLPSVVDGLKISQRKVLFACL 710
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR EVKVAQLAG +EH+AYHHGE SL STI+N+AQ+FVGSNN+ LL P GQFGT L
Sbjct: 711 KRKLTSEVKVAQLAGYCSEHTAYHHGEASLHSTIVNMAQDFVGSNNLPLLYPSGQFGTRL 770
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 86/151 (56%), Gaps = 17/151 (11%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDG--------------LHKVFKLQTTLAISSMCA 265
+ E+H+D V+F ++M+ L K DG L KV +L+ L+ S+M A
Sbjct: 936 FSEHHSDRDVRFDISMTRSDLAKYAEDGAKEEDSGDAGDSEALVKVLRLEAPLSTSNMHA 995
Query: 266 FDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGD 325
F+ G L K++T+ IL++FY +R E Y+KRK +LE E L+L+N+ RFI E G+
Sbjct: 996 FNADGQLVKYETSEDILRDFYGIRRELYSKRKQHLEQHQTKEVLRLSNRIRFIQEVSFGE 1055
Query: 326 LR--IENRKKKEMIAELIKRKYDSDPVKSWK 354
L+ +++R K + +L+K ++ P ++K
Sbjct: 1056 LQKVLKDRIPKAELVQLLK-EHGFSPASAFK 1085
>gi|426201630|gb|EKV51553.1| hypothetical protein AGABI2DRAFT_197775 [Agaricus bisporus var.
bisporus H97]
Length = 1551
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 122/178 (68%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +A++YFS+M +H I F + + D I +AFSKK D+RK WL R
Sbjct: 687 GLGTSNDADARDYFSHMAKHMIPFAPTQNGDRDLIDLAFSKKKADDRKEWL--------R 738
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ G D+ + I Y+EF+NKELI FS DN RSIP + DGLKPG RKV+++C
Sbjct: 739 QFRPGTFLDH----NLEEIPYSEFINKELICFSMADNIRSIPCVADGLKPGQRKVIWSCF 794
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR ++E+KVAQL G ++EH+AYHHGE SL TIINLAQ+FVGSNN+NLL P GQ+GT
Sbjct: 795 KRKLKKEIKVAQLVGYISEHAAYHHGEASLAQTIINLAQDFVGSNNVNLLSPNGQYGT 852
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 82/132 (62%), Gaps = 2/132 (1%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE+H + V FV++MS L KAE GL + FKL + L S+M FD G + ++++
Sbjct: 1015 DYKEHHDNANVHFVISMSAKDLEKAEEQGLREFFKLTSKLTTSNMICFDFEGKIKRYESP 1074
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
QI+++FY VRL YY KRKDYL G L KL NQARF+ D L + R+K +++A
Sbjct: 1075 EQIIEDFYPVRLAYYQKRKDYLAGELQDSLDKLNNQARFVKMIVDKKLVVSGRRKADIVA 1134
Query: 339 ELIKRKYDSDPV 350
+L RK D P+
Sbjct: 1135 DL--RKLDFKPI 1144
>gi|302202600|gb|ADL09409.1| DNA topoisomerase II [Omphalotus nidiformis]
Length = 1557
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 123/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST +A+ YFSNM +H I F + + D I +AFSKK DERK WL R
Sbjct: 709 GLGTSTDADARGYFSNMAKHMIPFAPTQEGDRELIELAFSKKKADERKEWL--------R 760
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G +L + + I Y+EFVNKELILFS DN RSIPS+ DGLKP RKV+++C
Sbjct: 761 QFKPGT---FLGHRLDE-IPYSEFVNKELILFSMADNIRSIPSIADGLKPDQRKVIWSCF 816
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN ++E+KV QL G V+EHS YHHG+ SL TI+ LAQ+FVGSNN+NLL P GQ+GT
Sbjct: 817 KRNLKKEIKVIQLVGYVSEHSVYHHGDASLTQTIVALAQDFVGSNNLNLLVPCGQYGT 874
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 75/124 (60%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
+Y+E+H + V FVV M +L KAE GL + FKL + + S+M FD G + K+++
Sbjct: 1036 NYQEHHANENVHFVVQMDAKELVKAEEKGLLEYFKLTSKITTSNMICFDFDGKIKKYESP 1095
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL EFYAVRL YY KRKD+L L +L+NQARF+ + L + RK+ +++
Sbjct: 1096 EAILDEFYAVRLGYYQKRKDHLASQLQMVFERLSNQARFVQMIVEKKLAVSGRKRADIVV 1155
Query: 339 ELIK 342
+L K
Sbjct: 1156 DLKK 1159
>gi|281203022|gb|EFA77223.1| DNA topoisomerase II [Polysphondylium pallidum PN500]
Length = 1265
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 98/181 (54%), Positives = 126/181 (69%), Gaps = 13/181 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGT+TS EAKEYFSN+++H I FK++ D D I MAF+K D+R+ WL
Sbjct: 719 GLGTNTSAEAKEYFSNLKKHVIKFKWN-DESDHLIGMAFNKDAADKRQQWLMA------- 770
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+M D+ + K ++Y++F+NKEL+ +S N RSIPS+ DGLKPG RK+LF C
Sbjct: 771 -ADMTQSVDH----SIKELSYSDFINKELVHYSWAANHRSIPSVMDGLKPGQRKILFACF 825
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN E+KVAQL+G VAEH+AYHHGEQSL STI+ +AQ+FVGSNNI L+ GQFGT L
Sbjct: 826 KRNLTHEIKVAQLSGYVAEHTAYHHGEQSLSSTIVKMAQDFVGSNNIPLISQGGQFGTRL 885
Query: 191 F 191
Sbjct: 886 M 886
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEM---DGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
+ E +T+ TV F V+ + +++ + E + L +FKL T+L ++ F G + K++
Sbjct: 1042 FTEENTENTVNFTVSTTYEQMERLEESTENELLSLFKL-TSLVHPNLTLFAPDGTVKKYE 1100
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
+ +I+ EFY VRL+ Y KR++ + L + K FI G ++I K +
Sbjct: 1101 SVEEIVDEFYGVRLDAYVKRRENIMKKLQQQIDKHKVTINFIQLIASGKVKIGGVSKDNV 1160
Query: 337 IAEL 340
I +L
Sbjct: 1161 IKDL 1164
>gi|15229538|ref|NP_189031.1| DNA topoisomerase 2 [Arabidopsis thaliana]
gi|1174740|sp|P30182.2|TOP2_ARATH RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
II
gi|474890|gb|AAA65448.1| topoisomerase II [Arabidopsis thaliana]
gi|9294657|dbj|BAB03006.1| DNA topoisomerase II [Arabidopsis thaliana]
gi|332643305|gb|AEE76826.1| DNA topoisomerase 2 [Arabidopsis thaliana]
Length = 1473
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 125/178 (70%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST++E KEYFSN+ H+ F + + D I +AFSKK ++ RK WL+++
Sbjct: 616 GLGTSTAEEGKEYFSNLGLHKKDFVWEDEQDGEAIELAFSKKKIEARKNWLSSY------ 669
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ ++L + K +TY++FVNKELILFS D +RSIPS+ DGLKPG RK+LF
Sbjct: 670 -----VPGNHLDQRQPK-VTYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFVAF 723
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+ R+E+KVAQL G V+ SAYHHGEQSL S II +AQ++VGSNNINLL P GQFGT
Sbjct: 724 KKIARKEMKVAQLVGYVSLLSAYHHGEQSLASAIIGMAQDYVGSNNINLLLPNGQFGT 781
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 83/134 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D K Y+ + +V F + +S + + A +G K FKL TT+A S+M FD+ GV+ K+ T
Sbjct: 946 DVKAYNDEKSVDFDLILSEENMLAARQEGFLKKFKLTTTIATSNMHLFDKKGVIKKYVTP 1005
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
QIL+EF+ +R EYY KRK+ + + E LKL N+ARFI+ G++ + RKK +++
Sbjct: 1006 EQILEEFFDLRFEYYEKRKETVVKNMEIELLKLENKARFILAVLSGEIIVNKRKKADIVE 1065
Query: 339 ELIKRKYDSDPVKS 352
+L ++ + P K+
Sbjct: 1066 DLRQKGFTPFPRKA 1079
>gi|297831176|ref|XP_002883470.1| hypothetical protein ARALYDRAFT_898932 [Arabidopsis lyrata subsp.
lyrata]
gi|297329310|gb|EFH59729.1| hypothetical protein ARALYDRAFT_898932 [Arabidopsis lyrata subsp.
lyrata]
Length = 1432
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 124/178 (69%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST++EAKEYF N+ H+ F + + D I +AFSKK ++ RK WL+ ++
Sbjct: 614 GLGTSTTEEAKEYFKNLGLHKKDFVWEDEQDGEAIELAFSKKKIEARKNWLSNYVPGT-- 671
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+L + K +TY++FVNKELILFS D +RSIPS+ DGLKPG RK+LFT
Sbjct: 672 ---------HLDQREPK-VTYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFTAF 721
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+ +E+KVAQL G V+ SAYHHGEQSL S II +AQ++VGSNNINLLQP GQFGT
Sbjct: 722 KKIVVKEMKVAQLVGYVSSMSAYHHGEQSLASAIIGMAQDYVGSNNINLLQPNGQFGT 779
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 84/134 (62%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D K Y+ D +V F + +S + + A +G K FKL TT+A S+M FDR GV+ K+ T
Sbjct: 944 DVKAYNDDKSVDFDLILSEENMLAARQEGFLKKFKLTTTIATSNMHLFDRKGVIKKYATP 1003
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
QIL+EF+ +RLEYY KRK+ + L E LKL N+ RFI+ G++ + NRKK +++
Sbjct: 1004 EQILEEFFELRLEYYEKRKETMLKNLEIELLKLENKVRFILGVLSGEIIVNNRKKADIVE 1063
Query: 339 ELIKRKYDSDPVKS 352
+L +R + P K+
Sbjct: 1064 DLRQRGFTPFPKKA 1077
>gi|401425172|ref|XP_003877071.1| DNA topoisomerase ii [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322493315|emb|CBZ28601.1| DNA topoisomerase ii [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 1497
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 124/180 (68%), Gaps = 8/180 (4%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E +EYF N++RHR+ F +++ I MAF K V++RK W+T +
Sbjct: 589 GLGTSGAEEGREYFENIDRHRLSFVEQEQSEEDRIVMAFGKDRVEDRKEWITNFKTNVNV 648
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ M DY + ++Y +FV+KELILFS D ERSIPS+ DG KPG RK+LF+C
Sbjct: 649 NESM----DY----NVRQVSYRDFVDKELILFSIADCERSIPSVIDGFKPGQRKILFSCF 700
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +KV QLAG V+EHSAYHHGEQSL+ TI+ +AQ+FVGSNN+ LL+ GQFGT L
Sbjct: 701 KRNLVNSIKVVQLAGYVSEHSAYHHGEQSLVQTIVGMAQDFVGSNNVPLLRKDGQFGTRL 760
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 76/127 (59%), Gaps = 1/127 (0%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHK-AEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
Y+E+ TD TV F V + P L + D + + +L+ + +++ AF++ G +TK+
Sbjct: 917 YREHTTDVTVDFEVFLHPQVLEQWVAQDVVEERLQLKEYVHATNIIAFNKEGQITKYSDA 976
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+LKEFY VRL+YYAKRK YL G L KL N RF+ E +G L + RKKKE++
Sbjct: 977 ESVLKEFYLVRLDYYAKRKQYLLGELRRLTSKLENMVRFVREVVEGTLVVTKRKKKELLE 1036
Query: 339 ELIKRKY 345
+L +R Y
Sbjct: 1037 DLQRRMY 1043
>gi|186510360|ref|NP_001118686.1| DNA topoisomerase 2 [Arabidopsis thaliana]
gi|332643306|gb|AEE76827.1| DNA topoisomerase 2 [Arabidopsis thaliana]
Length = 1438
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 125/178 (70%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST++E KEYFSN+ H+ F + + D I +AFSKK ++ RK WL+++
Sbjct: 616 GLGTSTAEEGKEYFSNLGLHKKDFVWEDEQDGEAIELAFSKKKIEARKNWLSSY------ 669
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ ++L + K +TY++FVNKELILFS D +RSIPS+ DGLKPG RK+LF
Sbjct: 670 -----VPGNHLDQRQPK-VTYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFVAF 723
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+ R+E+KVAQL G V+ SAYHHGEQSL S II +AQ++VGSNNINLL P GQFGT
Sbjct: 724 KKIARKEMKVAQLVGYVSLLSAYHHGEQSLASAIIGMAQDYVGSNNINLLLPNGQFGT 781
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 83/134 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D K Y+ + +V F + +S + + A +G K FKL TT+A S+M FD+ GV+ K+ T
Sbjct: 946 DVKAYNDEKSVDFDLILSEENMLAARQEGFLKKFKLTTTIATSNMHLFDKKGVIKKYVTP 1005
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
QIL+EF+ +R EYY KRK+ + + E LKL N+ARFI+ G++ + RKK +++
Sbjct: 1006 EQILEEFFDLRFEYYEKRKETVVKNMEIELLKLENKARFILAVLSGEIIVNKRKKADIVE 1065
Query: 339 ELIKRKYDSDPVKS 352
+L ++ + P K+
Sbjct: 1066 DLRQKGFTPFPRKA 1079
>gi|154340639|ref|XP_001566276.1| DNA topoisomerase ii [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134063595|emb|CAM39778.1| DNA topoisomerase ii [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 1501
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 124/180 (68%), Gaps = 8/180 (4%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E +EYF N++RHR+ F +++ I MAF K V++RK W+T +
Sbjct: 589 GLGTSGAEEGREYFENIDRHRLSFVEQDQSEEDRIVMAFGKDRVEDRKEWITNFKTNVNV 648
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ M DY + + ++Y +FV+KELILFS D ERSIPS DG KPG RK+LF+C
Sbjct: 649 NESM----DY----SVRQVSYRDFVDKELILFSIADCERSIPSAIDGFKPGQRKILFSCF 700
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +KV QLAG V+EHSAYHHGEQSL+ TI+ +AQ+FVGSNN+ LL+ GQFGT L
Sbjct: 701 KRNLVNSIKVVQLAGYVSEHSAYHHGEQSLVQTIVGMAQDFVGSNNVPLLRKDGQFGTRL 760
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 76/127 (59%), Gaps = 1/127 (0%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHK-AEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
Y+E+ TD TV F V + P L + D + + +L+ + +++ AF++ G +TK+
Sbjct: 917 YREHTTDVTVDFEVFLHPQVLEQWVAQDVVEERLQLKEYVHATNIIAFNKEGQITKYWDA 976
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+LK+FY VRL+YYAKRKDYL G L KL N RF+ E +G L + RKKKE++
Sbjct: 977 ESVLKDFYLVRLDYYAKRKDYLLGELRRLTSKLENMVRFVREVVEGTLVVTKRKKKELLE 1036
Query: 339 ELIKRKY 345
+L R Y
Sbjct: 1037 DLQGRLY 1043
>gi|328353447|emb|CCA39845.1| DNA topoisomerase II [Komagataella pastoris CBS 7435]
Length = 1312
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 120/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E +EYFS +++H F D D I +AFSKK D+RK WL R
Sbjct: 669 GLGTSLAEEMREYFSQLDKHMKTFHALQDVDPGFIDLAFSKKKADDRKEWL--------R 720
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G+ D I ++F+NKELILFS DN RSIPS+ DG KP RK+L+ C
Sbjct: 721 GFEPGVHLD----PDLSIIPISDFINKELILFSMADNIRSIPSMLDGFKPSQRKILYGCY 776
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN R E+KV+QLAG + EHSAYHHG+QSL+ +II LAQ+FVGSNN+NLLQPIG FG+
Sbjct: 777 KRNLRSEIKVSQLAGYIGEHSAYHHGDQSLIQSIIGLAQDFVGSNNLNLLQPIGGFGS 834
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 92/145 (63%), Gaps = 4/145 (2%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H +KFV+T++ +++ K+ GL + FKL TT+ + +M AFD G + K+D
Sbjct: 997 DMEEQHG-MDLKFVITLTKEEMKKSLQMGLKERFKLITTINVGNMVAFDAAGKIKKYDNV 1055
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
N+I++++Y VRL++Y +RKD+L VLG + K+++QARF+ + +LR+ NRK+ E+I
Sbjct: 1056 NEIIEDYYHVRLDFYQRRKDHLAEVLGNQLEKISSQARFVKMIIENELRVNNRKRIELIE 1115
Query: 339 ELIK---RKYDSDPVKSWKMKQNKE 360
EL + K+ D W+ +E
Sbjct: 1116 ELQRLNFPKFSKDGKPIWQQVDQEE 1140
>gi|150951045|ref|XP_001387295.2| DNA topoisomerase II [Scheffersomyces stipitis CBS 6054]
gi|149388275|gb|EAZ63272.2| DNA topoisomerase II [Scheffersomyces stipitis CBS 6054]
Length = 1439
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 134/208 (64%), Gaps = 23/208 (11%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST EA++YFS +++H F ++D +I +AFSKK DERK WL +
Sbjct: 671 GLGTSTPLEARQYFSALDKHLKRFHALQEDDKQYIDLAFSKKKADERKEWLQGF------ 724
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ G D T+ I ++F+N+ELILFS DN RSIPS+ DG KPG RKVL+ C
Sbjct: 725 --QPGTHLDPNLTE----IPISDFINQELILFSMADNVRSIPSVLDGFKPGQRKVLYGCF 778
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN + E+KVAQL+G V+E + YHHGEQSL+ TII LAQNFVGSNNINLL+P G FGT
Sbjct: 779 KRNLKSEIKVAQLSGYVSEKTGYHHGEQSLVQTIIGLAQNFVGSNNINLLKPNGAFGTRA 838
Query: 191 ----------FIF-ESTNLSGAVVNALD 207
+IF E + ++ A+ N LD
Sbjct: 839 AGGKDFSAARYIFTEISKITRAIFNPLD 866
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 80/127 (62%), Gaps = 1/127 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H ++FVV MSPD++ KA GL + FKL +++++S+M AFD G + ++ +
Sbjct: 998 DMEEQHG-LNIRFVVKMSPDEMAKALKVGLLEKFKLISSISMSNMVAFDPLGRIKRYSSA 1056
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL+++Y VRLEYY KRKD++ L + K + QARF+ D L + N+K+ +++
Sbjct: 1057 QEILRDYYYVRLEYYQKRKDFMMDELQNQLTKFSEQARFVKMIIDKQLSVSNKKRVDLVK 1116
Query: 339 ELIKRKY 345
L K+
Sbjct: 1117 TLEDLKF 1123
>gi|254570861|ref|XP_002492540.1| Essential type II topoisomerase [Komagataella pastoris GS115]
gi|238032338|emb|CAY70361.1| Essential type II topoisomerase [Komagataella pastoris GS115]
Length = 1344
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 120/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E +EYFS +++H F D D I +AFSKK D+RK WL R
Sbjct: 654 GLGTSLAEEMREYFSQLDKHMKTFHALQDVDPGFIDLAFSKKKADDRKEWL--------R 705
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G+ D I ++F+NKELILFS DN RSIPS+ DG KP RK+L+ C
Sbjct: 706 GFEPGVHLD----PDLSIIPISDFINKELILFSMADNIRSIPSMLDGFKPSQRKILYGCY 761
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN R E+KV+QLAG + EHSAYHHG+QSL+ +II LAQ+FVGSNN+NLLQPIG FG+
Sbjct: 762 KRNLRSEIKVSQLAGYIGEHSAYHHGDQSLIQSIIGLAQDFVGSNNLNLLQPIGGFGS 819
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 92/145 (63%), Gaps = 4/145 (2%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H +KFV+T++ +++ K+ GL + FKL TT+ + +M AFD G + K+D
Sbjct: 949 DMEEQHG-MDLKFVITLTKEEMKKSLQMGLKERFKLITTINVGNMVAFDAAGKIKKYDNV 1007
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
N+I++++Y VRL++Y +RKD+L VLG + K+++QARF+ + +LR+ NRK+ E+I
Sbjct: 1008 NEIIEDYYHVRLDFYQRRKDHLAEVLGNQLEKISSQARFVKMIIENELRVNNRKRIELIE 1067
Query: 339 ELIK---RKYDSDPVKSWKMKQNKE 360
EL + K+ D W+ +E
Sbjct: 1068 ELQRLNFPKFSKDGKPIWQQVDQEE 1092
>gi|398018328|ref|XP_003862343.1| DNA topoisomerase ii [Leishmania donovani]
gi|322500572|emb|CBZ35649.1| DNA topoisomerase ii [Leishmania donovani]
Length = 1498
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 124/180 (68%), Gaps = 8/180 (4%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E +EYF N++RHR+ F +++ I MAF K V++RK W+T +
Sbjct: 589 GLGTSGAEEGREYFENIDRHRLNFVEQEQSEEDRIVMAFGKDRVEDRKEWITNFKTNVNV 648
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ M DY + ++Y +FV+KELILFS D ERSIPS+ DG KPG RK+LF+C
Sbjct: 649 NESM----DY----NVRQVSYRDFVDKELILFSIADCERSIPSVIDGFKPGQRKILFSCF 700
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +KV QLAG V+EHSAYHHGEQSL+ TI+ +AQ+FVGSNN+ LL+ GQFGT L
Sbjct: 701 KRNLVNSIKVVQLAGYVSEHSAYHHGEQSLVQTIVGMAQDFVGSNNVPLLRKDGQFGTRL 760
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHK-AEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
Y+E+ TD TV F V + P L + D + + +L+ + +++ AF++ G +TK+
Sbjct: 917 YREHTTDVTVDFEVFLHPQVLEQWVSQDVVEERLQLKEYVHATNIIAFNKEGQITKYSDA 976
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+LKEFY VRL+YYAKRK YL G L KL N RF+ E +G L + RKKKE++
Sbjct: 977 ESVLKEFYLVRLDYYAKRKQYLLGELRRLTSKLENMVRFVREVVEGTLVVTKRKKKELLE 1036
Query: 339 ELIKRKYDSDP 349
+L +R Y P
Sbjct: 1037 DLQRRMYLPFP 1047
>gi|301109930|ref|XP_002904045.1| DNA topoisomerase 2 [Phytophthora infestans T30-4]
gi|262096171|gb|EEY54223.1| DNA topoisomerase 2 [Phytophthora infestans T30-4]
Length = 807
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/187 (56%), Positives = 121/187 (64%), Gaps = 20/187 (10%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST E KEY S+++ H+I F Y GD D I MAFSKK V++RK WL R
Sbjct: 302 GLGTSTDAETKEYLSDLQTHQIRFTYDGDGDADVIDMAFSKKRVEDRKDWL--------R 353
Query: 71 RKEMGIGEDYLYTKTTKAITYTE------FVNKELILFSNMDNERSIPSLCDGLKPGSRK 124
E G DY + Y E FVNKELILFS DN RSIPS+ KP RK
Sbjct: 354 GYEPGTYVDY----DVDEMGYPEYAYRAGFVNKELILFSMADNIRSIPSVR--FKPSQRK 407
Query: 125 VLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIG 184
VLF C KRN R E+KVAQLAG V+EHSAYHHGE SL I+N+AQ+FVGSNNI+LL PIG
Sbjct: 408 VLFCCFKRNLRAELKVAQLAGYVSEHSAYHHGEASLQGCIVNMAQDFVGSNNIHLLPPIG 467
Query: 185 QFGTFLF 191
QFG+ L
Sbjct: 468 QFGSRLM 474
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 78/130 (60%), Gaps = 2/130 (1%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKA--EMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
D+KE HTD V F +TM L G+ K FKL+++L+ S+M FD G + K++
Sbjct: 632 DFKENHTDVKVLFTITMEQKALSDVTKAPGGIVKKFKLESSLSTSNMHLFDAAGHIKKYE 691
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
+I+ EFY +RLEYY +RK + L + L+N+ARF++ +G L + NRKK+E+
Sbjct: 692 NPKEIMAEFYGIRLEYYGRRKKAMLQKLQDQIKLLSNKARFVLAVVEGKLVVNNRKKQEL 751
Query: 337 IAELIKRKYD 346
+ EL+ YD
Sbjct: 752 LEELMAEGYD 761
>gi|157871926|ref|XP_001684512.1| DNA topoisomerase ii [Leishmania major strain Friedlin]
gi|68127581|emb|CAJ05684.1| DNA topoisomerase ii [Leishmania major strain Friedlin]
Length = 1497
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 124/180 (68%), Gaps = 8/180 (4%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E +EYF N++RHR+ F +++ I MAF K V++RK W+T +
Sbjct: 589 GLGTSGAEEGREYFENIDRHRLNFVEQEQSEEDRIVMAFGKDRVEDRKEWITNFKTNVNV 648
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ M DY + ++Y +FV+KELILFS D ERSIPS+ DG KPG RK+LF+C
Sbjct: 649 NESM----DY----NVRQVSYRDFVDKELILFSIADCERSIPSVIDGFKPGQRKILFSCF 700
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +KV QLAG V+EHSAYHHGEQSL+ TI+ +AQ+FVGSNN+ LL+ GQFGT L
Sbjct: 701 KRNLVNSIKVVQLAGYVSEHSAYHHGEQSLVQTIVGMAQDFVGSNNVPLLRKDGQFGTRL 760
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 76/127 (59%), Gaps = 1/127 (0%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHK-AEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
Y+E+ TD TV F V + P L + D + + +L+ + +++ AF++ G +TK+
Sbjct: 917 YREHTTDVTVDFEVFLHPQVLEQWVAQDVVEERLQLKEYVHATNIIAFNKEGQITKYSDA 976
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+LKEFY VRL+YYAKRK YL G L KL N RF+ E +G L + RKKKE++
Sbjct: 977 ESVLKEFYLVRLDYYAKRKQYLLGELRRLTSKLENMVRFVREVVEGTLVVTKRKKKELLE 1036
Query: 339 ELIKRKY 345
+L +R Y
Sbjct: 1037 DLQRRMY 1043
>gi|409083318|gb|EKM83675.1| hypothetical protein AGABI1DRAFT_117173 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1549
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +A++YFS+M +H I F + D I +AFSKK D+RK WL R
Sbjct: 685 GLGTSNDADARDYFSHMAKHMIPFAPTQHGDRDLIDLAFSKKKADDRKEWL--------R 736
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ G D+ + I Y+EF+NKELI FS DN RSIP + DGLKPG RKV+++C
Sbjct: 737 QFRPGTFLDH----NLEEIPYSEFINKELICFSMADNIRSIPCVADGLKPGQRKVIWSCF 792
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR ++E+KVAQL G ++EH+AYHHGE SL TIINLAQ+FVGSNN+NLL P GQ+GT
Sbjct: 793 KRKLKKEIKVAQLVGYISEHAAYHHGEASLAQTIINLAQDFVGSNNVNLLSPNGQYGT 850
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 82/132 (62%), Gaps = 2/132 (1%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE+H + V FV++MS L KAE GL + FKL + L S+M FD G + ++++
Sbjct: 1013 DYKEHHDNANVHFVISMSAKDLEKAEEQGLREFFKLTSKLTTSNMICFDFEGKIKRYESP 1072
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
QI+++FY VRL YY KRKDYL G L KL NQARF+ D L + R+K +++A
Sbjct: 1073 EQIIEDFYPVRLAYYQKRKDYLAGELQDSLDKLNNQARFVKMIVDKKLVVSGRRKADIVA 1132
Query: 339 ELIKRKYDSDPV 350
+L RK D P+
Sbjct: 1133 DL--RKLDFKPI 1142
>gi|339898748|ref|XP_001470271.2| DNA topoisomerase ii [Leishmania infantum JPCM5]
gi|321398489|emb|CAM69466.2| DNA topoisomerase ii, partial [Leishmania infantum JPCM5]
Length = 1252
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 124/180 (68%), Gaps = 8/180 (4%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E +EYF N++RHR+ F +++ I MAF K V++RK W+T +
Sbjct: 589 GLGTSGAEEGREYFENIDRHRLNFVEQEQSEEDRIVMAFGKDRVEDRKEWITNFKTNVNV 648
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ M DY + ++Y +FV+KELILFS D ERSIPS+ DG KPG RK+LF+C
Sbjct: 649 NESM----DY----NVRQVSYRDFVDKELILFSIADCERSIPSVIDGFKPGQRKILFSCF 700
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +KV QLAG V+EHSAYHHGEQSL+ TI+ +AQ+FVGSNN+ LL+ GQFGT L
Sbjct: 701 KRNLVNSIKVVQLAGYVSEHSAYHHGEQSLVQTIVGMAQDFVGSNNVPLLRKDGQFGTRL 760
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHK-AEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
Y+E+ TD TV F V + P L + D + + +L+ + +++ AF++ G +TK+
Sbjct: 917 YREHTTDVTVDFEVFLHPQVLEQWVSQDVVEERLQLKEYVHATNIIAFNKEGQITKYSDA 976
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+LKEFY VRL+YYAKRK YL G L KL N RF+ E +G L + RKKKE++
Sbjct: 977 ESVLKEFYLVRLDYYAKRKQYLLGELRRLTSKLENMVRFVREVVEGTLVVTKRKKKELLE 1036
Query: 339 ELIKRKYDSDP 349
+L +R Y P
Sbjct: 1037 DLQRRMYLPFP 1047
>gi|255729204|ref|XP_002549527.1| DNA topoisomerase 2 [Candida tropicalis MYA-3404]
gi|240132596|gb|EER32153.1| DNA topoisomerase 2 [Candida tropicalis MYA-3404]
Length = 1398
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST EA+EYF+ ++RH F D ++I +AFSKK DERK WL ++
Sbjct: 743 GLGTSTPMEAREYFTALDRHLKKFHALQGEDASYIDLAFSKKKADERKDWLQGFIPGTHL 802
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E+ I ++F+NKELILFS DN RSIPS+ DGLKPG RKVL+ C+
Sbjct: 803 DPEIN------------EIPISDFINKELILFSMSDNIRSIPSVLDGLKPGQRKVLYGCI 850
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+ + E+KVAQLAG V+E++ YHHGEQSL+ TII LAQNFVGSNNIN+L+P G FG+
Sbjct: 851 KKKLKSEIKVAQLAGYVSENTGYHHGEQSLVQTIIGLAQNFVGSNNINILKPNGSFGS 908
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 84/127 (66%), Gaps = 1/127 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E+HT T++KFVV ++ ++ K+ GL + FKL ++L++ +M AFD G + K+
Sbjct: 1070 DMEEHHT-TSIKFVVKLTDAEMQKSLRMGLMERFKLISSLSLGNMVAFDSMGRIKKYTDV 1128
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ILKEFY +RLEYY KRK Y+ L +E + L+ +ARF+ D L I N+KKK++I+
Sbjct: 1129 LEILKEFYYLRLEYYEKRKSYMVDKLQSELITLSEKARFVKLIIDKKLSISNKKKKDLIS 1188
Query: 339 ELIKRKY 345
ELI +
Sbjct: 1189 ELIANNF 1195
>gi|154270939|ref|XP_001536323.1| DNA topoisomerase 2 [Ajellomyces capsulatus NAm1]
gi|150409546|gb|EDN04990.1| DNA topoisomerase 2 [Ajellomyces capsulatus NAm1]
Length = 1808
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 125/180 (69%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++ +A+ YF ++++H F D++ I +AFSKK DERK WL R
Sbjct: 725 GLGTSSTDDAEIYFRDLDKHLKQFHVMQDHEAELIDLAFSKKKADERKEWL--------R 776
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ TT ITYT+FVNKELILFS DN RSIPS+ DGLKPG RKVL+TC
Sbjct: 777 QFKPGTFLDH----TTDEITYTDFVNKELILFSMADNIRSIPSVVDGLKPGQRKVLYTCF 832
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +++VKVA+L+G V +AY HGEQSL TII LAQNFVGSNNIN L+P G FG+ L
Sbjct: 833 KRNVKKDVKVAELSGYVLGMTAYQHGEQSLQQTIIGLAQNFVGSNNINCLEPSGNFGSRL 892
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 79/127 (62%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ + KA +GL + FKL T+A S++ AFD G +TK+++
Sbjct: 1052 DYKDYNTHTKVHFIIQLDEKYAKKAIAEGLEEKFKLTKTIATSNLVAFDPEGRITKYESV 1111
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL+EF++VRL+ Y KRK + + + K+TNQARF+ DG I + K +++
Sbjct: 1112 EEILREFFSVRLKLYEKRKQHQLSQMQKDLEKMTNQARFVQMIIDGKFVISKKPKAQLVR 1171
Query: 339 ELIKRKY 345
EL ++ +
Sbjct: 1172 ELKEKGF 1178
>gi|32813238|emb|CAE11801.1| topoisomerase II [Leishmania panamensis]
Length = 345
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 124/180 (68%), Gaps = 8/180 (4%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E +EYF N++RHR+ F +++ I MAF K V++RK W+T +
Sbjct: 160 GLGTSGAEEGREYFENIDRHRLSFVEQDQSEEDRIVMAFGKDRVEDRKEWITNFKTNVNV 219
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ M DY + + ++Y +FV+KELILFS D ERSIPS DG KPG RK+LF+C
Sbjct: 220 NESM----DY----SVRQVSYRDFVDKELILFSIADCERSIPSAIDGFKPGQRKILFSCF 271
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +KV QLAG V+EHSAYHHGEQSL+ TI+ +AQ+FVGSNN+ LL+ GQFGT L
Sbjct: 272 KRNLVNSIKVVQLAGYVSEHSAYHHGEQSLVQTIVGMAQDFVGSNNVPLLRKDGQFGTRL 331
>gi|330801777|ref|XP_003288900.1| hypothetical protein DICPUDRAFT_4475 [Dictyostelium purpureum]
gi|325081045|gb|EGC34576.1| hypothetical protein DICPUDRAFT_4475 [Dictyostelium purpureum]
Length = 1162
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 125/178 (70%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS + E KEYFS++E+H+I F++ D D I +AFSK DERK W+ +E
Sbjct: 582 GLGTSQASEGKEYFSDLEKHKIDFEWD-DKADTSIDLAFSKSKADERKKWMAEHVEGTYL 640
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
++ G+G+ ++YT+F+NKELILFS D ERSIPS+ DGLK RK+L++C
Sbjct: 641 -EQYGVGK----------LSYTDFINKELILFSIADCERSIPSIVDGLKTSQRKILYSCF 689
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN ++E+KVAQL G V+EHSAYHHGE SL STI+ +AQ ++GSNN NLL P G +GT
Sbjct: 690 KRNLKKEIKVAQLIGYVSEHSAYHHGEMSLYSTILGMAQEYIGSNNANLLYPSGAYGT 747
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 63/99 (63%)
Query: 248 LHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAE 307
+ K+FKL +T+ ++M FD G + +F TT I + F+ +R++YY KRKDYL L E
Sbjct: 933 IEKIFKLSSTINETNMVVFDEEGRIQRFATTQLIQEHFFGLRMKYYQKRKDYLAEKLSEE 992
Query: 308 ALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKYD 346
KL N+ARFI+ + ++ I N KK +++ +L + K+D
Sbjct: 993 FKKLDNKARFILAVINKEIAINNVKKVDIMKKLKEMKFD 1031
>gi|10281016|dbj|BAB13749.1| type II DNA topoisomerase [Candida tropicalis]
Length = 782
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST EA+EYF+ ++RH F D ++I +AFSKK DERK WL ++
Sbjct: 569 GLGTSTPMEAREYFTALDRHLKKFHALQGEDASYIDLAFSKKKADERKDWLQGFIPGTHL 628
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E+ I ++F+NKELILFS DN RSIPS+ DGLKPG RKVL+ C+
Sbjct: 629 DPEI------------NEIPISDFINKELILFSMSDNIRSIPSVLDGLKPGQRKVLYGCI 676
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+ + E+KVAQLAG V+E++ YHHGEQSL+ TII LAQNFVGSNNIN+L+P G FG+
Sbjct: 677 KKKLKSEIKVAQLAGYVSENTGYHHGEQSLVQTIIGLAQNFVGSNNINILKPNGSFGS 734
>gi|225555588|gb|EEH03879.1| DNA topoisomerase II [Ajellomyces capsulatus G186AR]
Length = 1716
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 125/180 (69%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++ +A+ YF ++++H F D++ I +AFSKK DERK WL R
Sbjct: 629 GLGTSSTDDAEIYFRDLDKHLKQFHVMQDHEAELIDLAFSKKKADERKEWL--------R 680
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ TT ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+TC
Sbjct: 681 QFKPGTFLDH----TTDEITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTCF 736
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +++VKVA+L+G V +AY HGEQSL TII LAQNFVGSNNIN L+P G FG+ L
Sbjct: 737 KRNVKKDVKVAELSGYVLGMTAYQHGEQSLQQTIIGLAQNFVGSNNINCLEPSGNFGSRL 796
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 79/127 (62%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ + KA +GL + FKL T+A S++ AFD G +TK+++
Sbjct: 956 DYKDYNTHTKVHFIIQLDEKYAKKAIAEGLEEKFKLTKTIATSNLVAFDSEGRITKYESV 1015
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL+EF++VRL+ Y KRK + + + K+TNQARF+ DG I + K +++
Sbjct: 1016 EEILREFFSVRLKLYEKRKQHQLSQMQKDLEKMTNQARFVQMIIDGKFVISKKPKAQLVR 1075
Query: 339 ELIKRKY 345
EL ++ +
Sbjct: 1076 ELKEKGF 1082
>gi|354547146|emb|CCE43879.1| hypothetical protein CPAR2_501050 [Candida parapsilosis]
Length = 1443
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 130/208 (62%), Gaps = 23/208 (11%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST EA+EYF+ ++RH F D + I +AFSKK DERK WL ++ +
Sbjct: 661 GLGTSTPMEAREYFTALDRHLKRFHALQGEDSSCIDLAFSKKKADERKEWLQNFVPGNQL 720
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ I +EF+NKELILFS DN RSIPS+ DGLKPG RKVLF C
Sbjct: 721 DPALN------------EIPISEFINKELILFSMSDNIRSIPSVLDGLKPGQRKVLFGCF 768
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN + E+KVAQLA V+E++ YHHGE SL+ TII LAQNFVGSNNIN+L+P G FG+
Sbjct: 769 KRNLKSEIKVAQLAAYVSENTGYHHGEVSLVQTIIGLAQNFVGSNNINILKPNGAFGSRA 828
Query: 191 ----------FIF-ESTNLSGAVVNALD 207
+IF E +++ A+ N LD
Sbjct: 829 TGGKDAAAARYIFTELNDITKAIFNPLD 856
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 90/139 (64%), Gaps = 6/139 (4%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E+HT T ++FVV +S ++ KA GL + FKL +++++ +M AFD YG + K++
Sbjct: 988 DMEEHHT-TNIRFVVKLSDAEMEKALKVGLLEKFKLISSISLGNMVAFDPYGRIKKYNDV 1046
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ILK+FY VRLEYY KRK+++ +L + L ++ QARF+ + +L + N+KKK++I
Sbjct: 1047 FEILKDFYYVRLEYYEKRKNHMLEMLQRKLLMISEQARFVKMIIEKELSVANKKKKDLIE 1106
Query: 339 ELIKRKY-----DSDPVKS 352
L K + D PV+S
Sbjct: 1107 LLEKHDFTKFTKDGTPVES 1125
>gi|163931058|pdb|2RGR|A Chain A, Topoisomerase Iia Bound To G-segment Dna
Length = 759
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E +EYFSN++RH +F ND +I +AFSKK D+RK WL R
Sbjct: 186 GLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWL--------R 237
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D T K I ++F+NKELILFS DN RSIP++ DG KPG RKVL+ C
Sbjct: 238 QYEPGTVLD----PTLKEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCF 293
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N + E+KVAQLA V+E +AYHHGEQSL TII LAQNFVGSNNI LL P G FGT
Sbjct: 294 KKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIYLLLPNGAFGT 351
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H D +KF++T+SP+++ K G ++ FKL + +++ +M AFD +G + K+++
Sbjct: 514 DMEEQHDDN-IKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSV 572
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
N+IL EFY VRLEYY KRKD++ L E K + Q +FI + +L + N+ + +I
Sbjct: 573 NEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQ 632
Query: 339 EL 340
EL
Sbjct: 633 EL 634
>gi|297039743|pdb|3L4J|A Chain A, Topoisomerase Ii-Dna Cleavage Complex, Apo
gi|297039748|pdb|3L4K|A Chain A, Topoisomerase Ii-Dna Cleavage Complex, Metal-Bound
Length = 722
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E +EYFSN++RH +F ND +I +AFSKK D+RK WL R
Sbjct: 184 GLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWL--------R 235
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D T K I ++F+NKELILFS DN RSIP++ DG KPG RKVL+ C
Sbjct: 236 QYEPGTVLD----PTLKEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCF 291
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N + E+KVAQLA V+E +AYHHGEQSL TII LAQNFVGSNNI LL P G FGT
Sbjct: 292 KKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIYLLLPNGAFGT 349
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H D +KF++T+SP+++ K G ++ FKL + +++ +M AFD +G + K+++
Sbjct: 513 DMEEQHDDN-IKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSV 571
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
N+IL EFY VRLEYY KRKD++ L E K + Q +FI + +L + N+ + +I
Sbjct: 572 NEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQ 631
Query: 339 EL 340
EL
Sbjct: 632 EL 633
>gi|19880936|gb|AAM00578.1|AF458979_3 TOP2 [Saccharomyces cerevisiae]
Length = 1428
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E +EYFSN++RH +F ND +I +AFSKK D+RK WL R
Sbjct: 604 GLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWL--------R 655
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D T K I ++F+NKELILFS DN RSIP++ DG KPG RKVL+ C
Sbjct: 656 QYEPGTVLD----PTLKEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCF 711
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N + E+KVAQLA V+E +AYHHGEQSL TII LAQNFVGSNNI LL P G FGT
Sbjct: 712 KKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIYLLLPNGAFGT 769
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H D +KF++T+SP+++ K G ++ FKL + +++ +M AFD +G + K+++
Sbjct: 932 DMEEQHDDN-IKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSV 990
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
N+IL EFY VRLEYY KRKD++ L E K + Q +FI + +L + N+ + +I
Sbjct: 991 NEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQ 1050
Query: 339 EL 340
EL
Sbjct: 1051 EL 1052
>gi|325089309|gb|EGC42619.1| DNA topoisomerase II [Ajellomyces capsulatus H88]
Length = 1712
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 125/180 (69%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++ +A+ YF ++++H F D++ I +AFSKK DERK WL R
Sbjct: 629 GLGTSSTDDAEIYFRDLDKHLKQFHVMQDHEAELIDLAFSKKKADERKEWL--------R 680
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ TT ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+TC
Sbjct: 681 QFKPGTFLDH----TTDEITYTDFINKELILFSMADNIRSIPSVIDGLKPGQRKVLYTCF 736
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +++VKVA+L+G V +AY HGEQSL TII LAQNFVGSNNIN L+P G FG+ L
Sbjct: 737 KRNVKKDVKVAELSGYVLGMTAYQHGEQSLQQTIIGLAQNFVGSNNINCLEPSGNFGSRL 796
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 79/127 (62%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ + KA +GL + FKL T+A S++ AFD G +TK+++
Sbjct: 956 DYKDYNTHTKVHFIIQLDEKYAKKAIAEGLEEKFKLTKTIATSNLVAFDSEGRITKYESV 1015
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL+EF++VRL+ Y KRK + + + K+TNQARF+ DG I + K +++
Sbjct: 1016 EEILREFFSVRLKLYEKRKQHQLSQMQKDLEKMTNQARFVQMIIDGKFVISKKPKAQLVR 1075
Query: 339 ELIKRKY 345
EL ++ +
Sbjct: 1076 ELKEKGF 1082
>gi|172998|gb|AAB36610.1| topoisomerase II [Saccharomyces cerevisiae]
Length = 1429
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E +EYFSN++RH +F ND +I +AFSKK D+RK WL R
Sbjct: 605 GLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWL--------R 656
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D T K I ++F+NKELILFS DN RSIP++ DG KPG RKVL+ C
Sbjct: 657 QYEPGTVLD----PTLKEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCF 712
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N + E+KVAQLA V+E +AYHHGEQSL TII LAQNFVGSNNI LL P G FGT
Sbjct: 713 KKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIYLLLPNGAFGT 770
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H D +KF++T+SP+++ K G ++ FKL + +++ +M AFD +G + K+++
Sbjct: 933 DMEEQHDDN-IKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSV 991
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
N+IL EFY VRLEYY KRKD++ L E K + Q +FI + +L + N+ + +I
Sbjct: 992 NEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQ 1051
Query: 339 EL 340
EL
Sbjct: 1052 EL 1053
>gi|389750841|gb|EIM91914.1| type II DNA topoisomerase [Stereum hirsutum FP-91666 SS1]
Length = 1489
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 119/178 (66%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +A++YFS+M +H I F + + D I +AFSKK DERK WL R
Sbjct: 623 GLGTSKDSDARDYFSHMAKHMISFAPTAEGDRELIDLAFSKKKADERKEWL--------R 674
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ G T I+ +F+NKELILFS DN RSIP + DGLKPG RKV++ C
Sbjct: 675 QLRPGT----FLNHDTDEISINDFINKELILFSYADNVRSIPCVADGLKPGQRKVVWGCF 730
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+R R EVKVAQL G ++EH+AYHHGEQSL TI+NLAQ++VG+NN+NLL P GQ+GT
Sbjct: 731 RRKMRTEVKVAQLVGYISEHAAYHHGEQSLTQTIVNLAQDYVGANNLNLLMPNGQYGT 788
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 79/127 (62%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE+H +T V FV+ M+ L KAE GL + FKL ++ ++M FD G + K+ +
Sbjct: 949 DYKEHHDNTNVHFVINMAAKDLEKAEAQGLIEFFKLTGKISTNNMMCFDFDGKIKKYTSP 1008
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL++FY RL YY KRKD++ L + KL+NQARFI +L + NRKK +++
Sbjct: 1009 EEILEDFYPKRLAYYQKRKDHMAADLQNQFEKLSNQARFIQMIVSKELVVSNRKKADIVQ 1068
Query: 339 ELIKRKY 345
EL K ++
Sbjct: 1069 ELRKHEF 1075
>gi|19880901|gb|AAM00548.1|AF458974_3 TOP2 [Saccharomyces cerevisiae]
Length = 1428
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E +EYFSN++RH +F ND +I +AFSKK D+RK WL R
Sbjct: 604 GLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWL--------R 655
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D T K I ++F+NKELILFS DN RSIP++ DG KPG RKVL+ C
Sbjct: 656 QYEPGTVLD----PTLKEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCF 711
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N + E+KVAQLA V+E +AYHHGEQSL TII LAQNFVGSNNI LL P G FGT
Sbjct: 712 KKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIYLLLPNGAFGT 769
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H D +KF++T+SP+++ K G ++ FKL + +++ +M AFD +G + K+++
Sbjct: 932 DMEEQHDDN-IKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSV 990
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
N+IL EFY VRLEYY KRKD++ L E K + Q +FI + +L + N+ + +I
Sbjct: 991 NEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQ 1050
Query: 339 EL 340
EL
Sbjct: 1051 EL 1052
>gi|19880943|gb|AAM00584.1|AF458980_3 TOP2 [Saccharomyces cerevisiae]
Length = 1428
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E +EYFSN++RH +F ND +I +AFSKK D+RK WL R
Sbjct: 604 GLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWL--------R 655
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D T K I ++F+NKELILFS DN RSIP++ DG KPG RKVL+ C
Sbjct: 656 QYEPGTVLD----PTLKEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCF 711
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N + E+KVAQLA V+E +AYHHGEQSL TII LAQNFVGSNNI LL P G FGT
Sbjct: 712 KKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIYLLLPNGAFGT 769
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H D +KF++T+SP+++ K G ++ FKL + +++ +M AFD +G + K+++
Sbjct: 932 DMEEQHDDN-IKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSV 990
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
N+IL EFY VRLEYY KRKD++ L E K + Q +FI + +L + N+ + +I
Sbjct: 991 NEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQ 1050
Query: 339 EL 340
EL
Sbjct: 1051 EL 1052
>gi|19880950|gb|AAM00590.1|AF458981_3 TOP2 [Saccharomyces cerevisiae]
Length = 1428
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E +EYFSN++RH +F ND +I +AFSKK D+RK WL R
Sbjct: 604 GLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWL--------R 655
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D T K I ++F+NKELILFS DN RSIP++ DG KPG RKVL+ C
Sbjct: 656 QYEPGTVLD----PTLKEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCF 711
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N + E+KVAQLA V+E +AYHHGEQSL TII LAQNFVGSNNI LL P G FGT
Sbjct: 712 KKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIYLLLPNGAFGT 769
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H D +KF++T+SP+++ K G ++ FKL + +++ +M AFD +G + K+++
Sbjct: 932 DMEEQHDDN-IKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSV 990
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
N+IL EFY VRLEYY KRKD++ L E K + Q +FI + +L + N+ + +I
Sbjct: 991 NEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQ 1050
Query: 339 EL 340
EL
Sbjct: 1051 EL 1052
>gi|157830305|pdb|1BGW|A Chain A, Topoisomerase Residues 410-1202
gi|157830349|pdb|1BJT|A Chain A, Topoisomerase Ii Residues 409-1201
Length = 793
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E +EYFSN++RH +F ND +I +AFSKK D+RK WL R
Sbjct: 196 GLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWL--------R 247
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D T K I ++F+NKELILFS DN RSIP++ DG KPG RKVL+ C
Sbjct: 248 QYEPGTVLD----PTLKEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCF 303
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N + E+KVAQLA V+E +AYHHGEQSL TII LAQNFVGSNNI LL P G FGT
Sbjct: 304 KKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIYLLLPNGAFGT 361
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H D +KF++T+SP+++ K G ++ FKL + +++ +M AFD +G + K+++
Sbjct: 524 DMEEQHDDN-IKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSV 582
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
N+IL EFY VRLEYY KRKD++ L E K + Q +FI + +L + N+ + +I
Sbjct: 583 NEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQ 642
Query: 339 EL 340
EL
Sbjct: 643 EL 644
>gi|19880894|gb|AAM00542.1|AF458973_3 TOP2 [Saccharomyces cerevisiae]
gi|256270263|gb|EEU05481.1| Top2p [Saccharomyces cerevisiae JAY291]
Length = 1428
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E +EYFSN++RH +F ND +I +AFSKK D+RK WL R
Sbjct: 604 GLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWL--------R 655
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D T K I ++F+NKELILFS DN RSIP++ DG KPG RKVL+ C
Sbjct: 656 QYEPGTVLD----PTLKEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCF 711
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N + E+KVAQLA V+E +AYHHGEQSL TII LAQNFVGSNNI LL P G FGT
Sbjct: 712 KKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIYLLLPNGAFGT 769
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H D +KF++T+SP+++ K G ++ FKL + +++ +M AFD +G + K+++
Sbjct: 932 DMEEQHDDN-IKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSV 990
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
N+IL EFY VRLEYY KRKD++ L E K + Q +FI + +L + N+ + +I
Sbjct: 991 NEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQ 1050
Query: 339 EL 340
EL
Sbjct: 1051 EL 1052
>gi|19880908|gb|AAM00554.1|AF458975_3 TOP2 [Saccharomyces cerevisiae]
gi|19880915|gb|AAM00560.1|AF458976_3 TOP2 [Saccharomyces cerevisiae]
gi|19880922|gb|AAM00566.1|AF458977_3 TOP2 [Saccharomyces cerevisiae]
gi|71064112|gb|AAZ22520.1| Top2p [Saccharomyces cerevisiae]
gi|151944446|gb|EDN62724.1| topoisomerase II [Saccharomyces cerevisiae YJM789]
gi|392296902|gb|EIW08003.1| Top2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1428
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E +EYFSN++RH +F ND +I +AFSKK D+RK WL R
Sbjct: 604 GLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWL--------R 655
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D T K I ++F+NKELILFS DN RSIP++ DG KPG RKVL+ C
Sbjct: 656 QYEPGTVLD----PTLKEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCF 711
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N + E+KVAQLA V+E +AYHHGEQSL TII LAQNFVGSNNI LL P G FGT
Sbjct: 712 KKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIYLLLPNGAFGT 769
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H D +KF++T+SP+++ K G ++ FKL + +++ +M AFD +G + K+++
Sbjct: 932 DMEEQHDDN-IKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSV 990
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
N+IL EFY VRLEYY KRKD++ L E K + Q +FI + +L + N+ + +I
Sbjct: 991 NEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQ 1050
Query: 339 EL 340
EL
Sbjct: 1051 EL 1052
>gi|349580849|dbj|GAA26008.1| K7_Top2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1428
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E +EYFSN++RH +F ND +I +AFSKK D+RK WL R
Sbjct: 604 GLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWL--------R 655
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D T K I ++F+NKELILFS DN RSIP++ DG KPG RKVL+ C
Sbjct: 656 QYEPGTVLD----PTLKEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCF 711
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N + E+KVAQLA V+E +AYHHGEQSL TII LAQNFVGSNNI LL P G FGT
Sbjct: 712 KKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIYLLLPNGAFGT 769
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H D +KF++T+SP+++ K G ++ FKL + +++ +M AFD +G + K+++
Sbjct: 932 DMEEQHDDN-IKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSV 990
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
N+IL EFY VRLEYY KRKD++ L E K + Q +FI + +L + N+ + +I
Sbjct: 991 NEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQ 1050
Query: 339 EL 340
EL
Sbjct: 1051 EL 1052
>gi|259149274|emb|CAY82516.1| Top2p [Saccharomyces cerevisiae EC1118]
Length = 1428
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E +EYFSN++RH +F ND +I +AFSKK D+RK WL R
Sbjct: 604 GLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWL--------R 655
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D T K I ++F+NKELILFS DN RSIP++ DG KPG RKVL+ C
Sbjct: 656 QYEPGTVLD----PTLKEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCF 711
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N + E+KVAQLA V+E +AYHHGEQSL TII LAQNFVGSNNI LL P G FGT
Sbjct: 712 KKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIYLLLPNGAFGT 769
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H D +KF++T+SP+++ K G ++ FKL + +++ +M AFD +G + K+++
Sbjct: 932 DMEEQHDDN-IKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSV 990
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
N+IL EFY VRLEYY KRKD++ L E K + Q +FI + +L + N+ + +I
Sbjct: 991 NEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQ 1050
Query: 339 EL 340
EL
Sbjct: 1051 EL 1052
>gi|19880873|gb|AAM00524.1|AF458970_3 TOP2 [Saccharomyces cerevisiae]
Length = 1428
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E +EYFSN++RH +F ND +I +AFSKK D+RK WL R
Sbjct: 604 GLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWL--------R 655
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D T K I ++F+NKELILFS DN RSIP++ DG KPG RKVL+ C
Sbjct: 656 QYEPGTVLD----PTLKEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCF 711
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N + E+KVAQLA V+E +AYHHGEQSL TII LAQNFVGSNNI LL P G FGT
Sbjct: 712 KKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIYLLLPNGAFGT 769
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H D +KF++T+SP+++ K G ++ FKL + +++ +M AFD +G + K+++
Sbjct: 932 DMEEQHDDN-IKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSV 990
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
N+IL EFY VRLEYY KRKD++ L E K + Q +FI + +L + N+ + +I
Sbjct: 991 NEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQ 1050
Query: 339 EL 340
EL
Sbjct: 1051 EL 1052
>gi|398364937|ref|NP_014311.3| DNA topoisomerase 2 [Saccharomyces cerevisiae S288c]
gi|1351262|sp|P06786.2|TOP2_YEAST RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
II
gi|19880866|gb|AAM00518.1|AF458969_3 TOP2 [Saccharomyces cerevisiae]
gi|19880880|gb|AAM00530.1|AF458971_3 TOP2 [Saccharomyces cerevisiae]
gi|19880887|gb|AAM00536.1|AF458972_3 TOP2 [Saccharomyces cerevisiae]
gi|887623|emb|CAA61422.1| ORF N2244 [Saccharomyces cerevisiae]
gi|1301989|emb|CAA95964.1| TOP2 [Saccharomyces cerevisiae]
gi|285814563|tpg|DAA10457.1| TPA: DNA topoisomerase 2 [Saccharomyces cerevisiae S288c]
Length = 1428
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E +EYFSN++RH +F ND +I +AFSKK D+RK WL R
Sbjct: 604 GLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWL--------R 655
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D T K I ++F+NKELILFS DN RSIP++ DG KPG RKVL+ C
Sbjct: 656 QYEPGTVLD----PTLKEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCF 711
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N + E+KVAQLA V+E +AYHHGEQSL TII LAQNFVGSNNI LL P G FGT
Sbjct: 712 KKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIYLLLPNGAFGT 769
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H D +KF++T+SP+++ K G ++ FKL + +++ +M AFD +G + K+++
Sbjct: 932 DMEEQHDDN-IKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSV 990
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
N+IL EFY VRLEYY KRKD++ L E K + Q +FI + +L + N+ + +I
Sbjct: 991 NEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQ 1050
Query: 339 EL 340
EL
Sbjct: 1051 EL 1052
>gi|19880929|gb|AAM00572.1|AF458978_3 TOP2 [Saccharomyces cerevisiae]
Length = 1428
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E +EYFSN++RH +F ND +I +AFSKK D+RK WL R
Sbjct: 604 GLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWL--------R 655
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D T K I ++F+NKELILFS DN RSIP++ DG KPG RKVL+ C
Sbjct: 656 QYEPGTVLD----PTLKEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCF 711
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N + E+KVAQLA V+E +AYHHGEQSL TII LAQNFVGSNNI LL P G FGT
Sbjct: 712 KKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIYLLLPNGAFGT 769
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H D +KF++T+SP+++ K G ++ FKL + +++ +M AFD +G + K+++
Sbjct: 932 DMEEQHDDN-IKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSV 990
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
N+IL EFY VRLEYY KRKD++ L E K + Q +FI + +L + N+ + +I
Sbjct: 991 NEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQ 1050
Query: 339 EL 340
EL
Sbjct: 1051 EL 1052
>gi|240280878|gb|EER44382.1| DNA topoisomerase 2 [Ajellomyces capsulatus H143]
Length = 1737
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 125/180 (69%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++ +A+ YF ++++H F D++ I +AFSKK DERK WL R
Sbjct: 725 GLGTSSTDDAEIYFRDLDKHLKQFHVMQDHEAELIDLAFSKKKADERKEWL--------R 776
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ TT ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+TC
Sbjct: 777 QFKPGTFLDH----TTDEITYTDFINKELILFSMADNIRSIPSVIDGLKPGQRKVLYTCF 832
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +++VKVA+L+G V +AY HGEQSL TII LAQNFVGSNNIN L+P G FG+ L
Sbjct: 833 KRNVKKDVKVAELSGYVLGMTAYQHGEQSLQQTIIGLAQNFVGSNNINCLEPSGNFGSRL 892
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 79/127 (62%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ + KA +GL + FKL T+A S++ AFD G +TK+++
Sbjct: 1052 DYKDYNTHTKVHFIIQLDEKYAKKAIAEGLEEKFKLTKTIATSNLVAFDSEGRITKYESV 1111
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL+EF++VRL+ Y KRK + + + K+TNQARF+ DG I + K +++
Sbjct: 1112 EEILREFFSVRLKLYEKRKQHQLSQMQKDLEKMTNQARFVQMIIDGKFVISKKPKAQLVR 1171
Query: 339 ELIKRKY 345
EL ++ +
Sbjct: 1172 ELKEKGF 1178
>gi|190409077|gb|EDV12342.1| DNA topoisomerase 2 [Saccharomyces cerevisiae RM11-1a]
Length = 1428
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E +EYFSN++RH +F ND +I +AFSKK D+RK WL R
Sbjct: 604 GLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWL--------R 655
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D T K I ++F+NKELILFS DN RSIP++ DG KPG RKVL+ C
Sbjct: 656 QYEPGTVLD----PTLKEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCF 711
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N + E+KVAQLA V+E +AYHHGEQSL TII LAQNFVGSNNI LL P G FGT
Sbjct: 712 KKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIYLLLPNGAFGT 769
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H D +KF++T+SP+++ K G ++ FKL + +++ +M AFD +G + K+++
Sbjct: 932 DMEEQHDDN-IKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSV 990
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
N+IL EFY VRLEYY KRKD++ L E K + Q +FI + +L + N+ + +I
Sbjct: 991 NEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQ 1050
Query: 339 EL 340
EL
Sbjct: 1051 EL 1052
>gi|10281018|dbj|BAB13750.1| type II DNA topoisomerase [Candida tropicalis]
Length = 782
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 120/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST EA+EYF+ ++RH F D +I +AFSKK DERK WL ++
Sbjct: 569 GLGTSTPMEAREYFTALDRHLKKFHALQGQDSNYIDLAFSKKKADERKEWLQGFIPGTHL 628
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E+ I ++F+NKELILFS DN RSIPS+ DGLKPG RKVL+ C+
Sbjct: 629 DPEI------------NEIPISDFINKELILFSMSDNIRSIPSVLDGLKPGQRKVLYGCI 676
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+ + E+KVAQLAG V+E++ YHHGEQSL+ TII LAQNFVGSNNIN+L+P G FG+
Sbjct: 677 KKKLKSEIKVAQLAGYVSENTGYHHGEQSLVQTIIGLAQNFVGSNNINILKPNGSFGS 734
>gi|393247852|gb|EJD55359.1| type II DNA topoisomerase [Auricularia delicata TFB-10046 SS5]
Length = 1538
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 134/223 (60%), Gaps = 23/223 (10%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++ ++YF +ME+H I F D + +AFSKK DERK WL
Sbjct: 694 GLGTSKPEDGRDYFGHMEKHVIPFAPCDDEGKQAVDLAFSKKRADERKDWLRQ------- 746
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ D + + I+ T+F+NKELILFS DN RSIPS DGLKPG RKV+++C
Sbjct: 747 -----LQPDTFLDHSQRQISLTDFINKELILFSQADNIRSIPSGIDGLKPGQRKVIWSCF 801
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT-- 188
KR R E+KVAQL G ++EH+AYHHGE SL TI+NLAQ+FVGSNN+NLL P G FG+
Sbjct: 802 KRKLRGEIKVAQLVGYISEHAAYHHGEASLGMTIVNLAQDFVGSNNVNLLLPNGIFGSRE 861
Query: 189 --------FLFIF-ESTNLSGAVVNALDFGSGGWRFESNDYKE 222
F +IF E + ++ + + D G + E ND E
Sbjct: 862 MGGKDAAAFRYIFTELSPITRTIFHPSDEGLLKYLQEDNDIVE 904
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 83/134 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY E+HT TV F VT+S + KAE GL + FKL T + S+M FD+ G + K++T
Sbjct: 1022 DYTEHHTFVTVNFHVTLSEKDMAKAEEKGLAEYFKLTTKINTSNMICFDKDGKIKKYNTA 1081
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I+++FY +RL +Y KRKD+L L E +L NQARF+ + L + NRKK +++A
Sbjct: 1082 EEIIEDFYPLRLSFYQKRKDHLAADLQKEVDRLNNQARFVQMIVERKLSVSNRKKADIVA 1141
Query: 339 ELIKRKYDSDPVKS 352
EL K + P KS
Sbjct: 1142 ELRKLDFTPFPKKS 1155
>gi|403419656|emb|CCM06356.1| predicted protein [Fibroporia radiculosa]
Length = 1571
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 121/180 (67%), Gaps = 12/180 (6%)
Query: 9 IAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEEC 68
+ GLGTS ++A+ YF M +HRI F + D I +AFSKK D+RK WL
Sbjct: 685 LKGLGTSKDEDARRYFKLMRKHRIAFSTIKEGDRDSIELAFSKKRADDRKEWL------- 737
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
R+ + G D+ T I +T+F+N+ELILFS DN RSIPS+ DGLKP RKV++
Sbjct: 738 -RQFKPGTFLDH----TQGEIGFTDFINRELILFSMADNIRSIPSVADGLKPVQRKVIWA 792
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
C KR + E+KVAQL G V+EH+ YHHGEQSLM TI+NLAQ+FVG NN+NL+ P GQFGT
Sbjct: 793 CFKRKLKGEIKVAQLVGHVSEHAQYHHGEQSLMMTIVNLAQDFVGGNNLNLMMPNGQFGT 852
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYH + V FVV M P + KAE GL + F+L + S+M FD G + K++T
Sbjct: 1013 DYKEYHNNMNVHFVVHMEPKAVEKAESQGLLEFFRLTGKINTSNMICFDFEGKIKKYNTP 1072
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I+++FY RL YY KRKD++ L E KL NQ RFI D +L + NRKK +++A
Sbjct: 1073 EEIIEDFYPQRLAYYQKRKDFMANELSDELDKLNNQIRFIQMIIDRELAVSNRKKVDIVA 1132
Query: 339 ELIKRKYDSDP 349
+L K+++ P
Sbjct: 1133 DLRKKEFRPFP 1143
>gi|10281024|dbj|BAB13753.1| type II DNA topoisomerase [Candida parapsilosis]
Length = 779
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 130/208 (62%), Gaps = 23/208 (11%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST EA+EYF+ ++RH F D + I +AFSKK DERK WL ++ +
Sbjct: 566 GLGTSTPMEAREYFTALDRHLKRFHALQGEDSSCIDLAFSKKKADERKEWLQNFVPGNQL 625
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ I +EF+NKELILFS DN RSIPS+ DGLKPG RKVLF C
Sbjct: 626 DPAL------------NEIPISEFINKELILFSMSDNIRSIPSVLDGLKPGQRKVLFGCF 673
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN + E+KVAQLA V+E++ YHHGE SL+ TII LAQNFVGSNNIN+L+P G FG+
Sbjct: 674 KRNLKSEIKVAQLAAYVSENTGYHHGEVSLVQTIIGLAQNFVGSNNINILKPNGAFGSRA 733
Query: 191 ----------FIF-ESTNLSGAVVNALD 207
+IF E +++ A+ N LD
Sbjct: 734 TGGKDAAAARYIFTELNDITKAIFNPLD 761
>gi|406603298|emb|CCH45177.1| DNA topoisomerase II [Wickerhamomyces ciferrii]
Length = 1503
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 119/178 (66%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ +E +EYFS++E+H F +ND I +AFSKK D RK WL ++
Sbjct: 624 GLGTSSQEEGREYFSDLEKHLKTFNPLEENDKGLIDLAFSKKKADHRKEWLRGFVPGTHL 683
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
++ I +EF+NKELILFS DN RSIPS+ DG KPG RK+L+
Sbjct: 684 DIDLN------------EIPISEFINKELILFSMADNIRSIPSVLDGFKPGQRKILYGSF 731
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + E+KVAQLAG ++EH+ YHHGEQSL++TI+ LAQ+FVGSNNINLL P G FGT
Sbjct: 732 KRNLKSEIKVAQLAGYISEHTGYHHGEQSLITTIVGLAQDFVGSNNINLLLPKGSFGT 789
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H ++F+VT+S ++ K+E GL++ FKL + + +S+M FD G + K++T
Sbjct: 952 DMQEQHG-LGIRFIVTLSDAEMKKSEEIGLYERFKLHSVINLSNMVLFDPQGRIKKYETV 1010
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
++ILK+FY VRL+YY +RKD L L KL++QARFI D L I NRK+ ++I
Sbjct: 1011 DEILKDFYYVRLDYYQRRKDNLAKELSNHLEKLSSQARFIKLIIDKKLNINNRKRVDLIE 1070
Query: 339 EL 340
L
Sbjct: 1071 NL 1072
>gi|68480866|ref|XP_715586.1| DNA topoisomerase II [Candida albicans SC5314]
gi|68480977|ref|XP_715530.1| DNA topoisomerase II [Candida albicans SC5314]
gi|46437155|gb|EAK96506.1| DNA topoisomerase II [Candida albicans SC5314]
gi|46437215|gb|EAK96565.1| DNA topoisomerase II [Candida albicans SC5314]
Length = 1461
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 118/178 (66%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST EA+EYF+ ++RH F D +I +AFSKK DERK WL ++
Sbjct: 664 GLGTSTPMEAREYFTALDRHLKRFHALQGEDKDYIDLAFSKKKADERKEWLQGFLPGTHL 723
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E+ I ++F+NKELILFS DN RSIPS+ DG KPG RKVL+ C
Sbjct: 724 DPEI------------TEIPISDFINKELILFSMSDNVRSIPSVLDGFKPGQRKVLYGCF 771
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+ R E+KVAQLAG V+E++ YHHGEQSL+ TII LAQNFVGSNNIN+L+P G FG+
Sbjct: 772 KKKLRSEIKVAQLAGYVSENTGYHHGEQSLVQTIIGLAQNFVGSNNINVLKPNGSFGS 829
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 90/139 (64%), Gaps = 6/139 (4%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E+HT T+++FV+ ++ ++ K+ GL + FKL ++L++++M AFD G + K++
Sbjct: 991 DMEEHHT-TSIRFVIKLTDAEMQKSLRIGLLERFKLVSSLSLANMVAFDPMGRIKKYNDV 1049
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I+K+FY VRLEYY KRKDY+ L + L L+ QARFI + L + N+KKK+++A
Sbjct: 1050 LEIIKDFYYVRLEYYQKRKDYMTDNLQNQLLMLSEQARFIKMIIEKQLSVANKKKKQLVA 1109
Query: 339 ELIKRKY-----DSDPVKS 352
L + + D P+KS
Sbjct: 1110 LLEEHNFTKFSKDGKPIKS 1128
>gi|440294606|gb|ELP87606.1| DNA topoisomerase, putative [Entamoeba invadens IP1]
Length = 1306
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +AK YF +++ H+I F Y+G+ D I +AFSKK D+RK WL
Sbjct: 584 GLGTSKDSDAKVYFGDLDTHKIRFDYNGEPSDQVIDLAFSKKRADDRKEWLK-------- 635
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G + + ++++Y +FV+KELILFS D ERSIP + DGLKP RKVL+TCL
Sbjct: 636 ----GYDPNTYLDQDVESVSYQDFVHKELILFSYDDCERSIPCVVDGLKPSQRKVLWTCL 691
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+N RE+KV+QL+G V+E S+YHHGE SL STI+N+AQNF G+NNINLL P GQFG+ L
Sbjct: 692 IKNVIRELKVSQLSGLVSEKSSYHHGEVSLQSTIVNMAQNFCGANNINLLLPSGQFGSRL 751
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEM--DGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
++E+H TV FV+ ++ EM + + FKL +++ ++M F+ + K+ T
Sbjct: 909 FQEHHLINTVHFVIDLA------VEMTDEQVWNNFKLASSIKDANMHLFNSEMKIQKYHT 962
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
I++EF VRL+ Y RK + + + L L+N+ RFI +G L + NRKK ++
Sbjct: 963 PLDIMREFCEVRLKTYEARKKAIIDSMEHQMLILSNKVRFIKMVIEGKLIVNNRKKNDLY 1022
Query: 338 AELIKRKYDS--DPVKSWKMK 356
ELI +D DP K K K
Sbjct: 1023 KELISLGFDQIKDPKKLEKSK 1043
>gi|212531355|ref|XP_002145834.1| DNA topoisomerase II [Talaromyces marneffei ATCC 18224]
gi|210071198|gb|EEA25287.1| DNA topoisomerase II [Talaromyces marneffei ATCC 18224]
Length = 1696
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 126/180 (70%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF +++RH F D++ I +AFSKK DERK WL R
Sbjct: 719 GLGTSTTEDAQIYFRDLDRHLKEFHTMQDHEAQLIDLAFSKKKADERKEWL--------R 770
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +TK ITYT+F+NKELILFS DN+RSIPS+ DGLKPG RKVL+TC
Sbjct: 771 QYKPGTFLDH----STKQITYTDFINKELILFSMADNQRSIPSVVDGLKPGQRKVLYTCF 826
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN ++++KV +LAG V+ +AY HGE SL TI+ LAQ FVGSNN+N L+P G FG+ L
Sbjct: 827 KRNLKKDMKVVELAGHVSGMTAYQHGETSLQQTIVGLAQTFVGSNNLNCLEPSGNFGSRL 886
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V FV+ M L A +GL + FKL T+A +++ AFD G +TK+ T
Sbjct: 1046 DYKDYNTHTKVHFVIQMDEKHLKAAVDEGLEEKFKLSRTIATTNLVAFDPEGRITKYATV 1105
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ ILKEF+AVRL+YY +RK + L + K TNQARFI DG L + +KK +I
Sbjct: 1106 SDILKEFFAVRLKYYERRKQHQLSELQKQLDKFTNQARFIQMIIDGKLVVSKKKKATLIT 1165
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1166 ELKEKGFKPFP 1176
>gi|50305715|ref|XP_452818.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641951|emb|CAH01669.1| KLLA0C13838p [Kluyveromyces lactis]
Length = 1435
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 130/208 (62%), Gaps = 23/208 (11%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST +EA+EYFS +++H F +D I +AFSKK D+RK WL +
Sbjct: 608 GLGTSTQQEAREYFSGLDKHLKKFHALQGDDSQLIDLAFSKKKADDRKEWLKLY------ 661
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D T+ I ++F+NKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 662 --EPGTVLDPKLTE----IPISDFINKELILFSLADNIRSIPSVLDGLKPGQRKVIYACF 715
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN + E+KVAQL G V+EH+ YHHGEQSL TI+ LAQ+FVGSNNI LL+P G FGT
Sbjct: 716 KRNLKSEIKVAQLGGYVSEHTGYHHGEQSLYQTIVGLAQDFVGSNNIYLLKPNGAFGTRA 775
Query: 191 ----------FIFESTN-LSGAVVNALD 207
+IF N L+ + N LD
Sbjct: 776 TGGKDSAAPRYIFTELNKLTRKIFNTLD 803
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 74/123 (60%), Gaps = 1/123 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H T+KF++T++ D++ K G ++ FKL +T+++S+M AFD G + K+D
Sbjct: 936 DIQEQHG-ATIKFIITLTSDEMEKTRKIGFYERFKLVSTVSLSNMVAFDPQGKIKKYDDV 994
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL +FY RL YY KRKDY+ L E KL+ Q +FI+ + L + N+ + +
Sbjct: 995 RDILSDFYYTRLTYYQKRKDYIGERLKWEVEKLSYQVKFIMMIVEKKLSVSNKPRPVLFE 1054
Query: 339 ELI 341
EL+
Sbjct: 1055 ELM 1057
>gi|344305515|gb|EGW35747.1| DNA topoisomerase 2 [Spathaspora passalidarum NRRL Y-27907]
Length = 1429
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 119/178 (66%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST EA+EYFS +++H F +D I +AFSKK D+RK WL ++
Sbjct: 663 GLGTSTPIEAREYFSALDKHLKRFHALQGDDKECIDLAFSKKKADDRKEWLQGFLPGTHL 722
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
++ I ++F+NKELILFS DN RSIPS+ DGLKPG RKVLF C
Sbjct: 723 DPDLN------------DIPISDFINKELILFSMSDNVRSIPSVLDGLKPGQRKVLFGCY 770
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR R E+KVAQLAG V+E++ YHHGEQSL+ TII LAQNF+GSNNIN+L+P G FG+
Sbjct: 771 KRKLRSEIKVAQLAGYVSENTGYHHGEQSLIQTIIGLAQNFIGSNNINILKPNGSFGS 828
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 85/127 (66%), Gaps = 1/127 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E+HT T+++FVV +S ++ K+ GL + FKL ++L++ +M AFD G + K++
Sbjct: 990 DMEEHHT-TSIRFVVKLSDAEMEKSLKVGLLERFKLVSSLSLGNMVAFDPMGRIKKYNDV 1048
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ILK++Y VRLE+Y KRKDY+ L + + L+ QARFI + L + N+KKKE+++
Sbjct: 1049 LEILKDYYYVRLEFYQKRKDYMSEDLQNQLMMLSEQARFIKMIIEKKLSVANKKKKELVS 1108
Query: 339 ELIKRKY 345
L + K+
Sbjct: 1109 LLQQHKF 1115
>gi|452844784|gb|EME46718.1| hypothetical protein DOTSEDRAFT_87208 [Dothistroma septosporum
NZE10]
Length = 1714
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 123/180 (68%), Gaps = 11/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +++A+ YF++++ H F D + I +AFSKK DERKTWL ++
Sbjct: 731 GLGTSDTRDAQVYFADLDTHLKQFHAMQDGEPELIDLAFSKKKADERKTWLGNFVPGT-- 788
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
YL T + ITY +F+NKELILFS DN RSIPS+ DGLKPG RKV++TC
Sbjct: 789 ---------YLDTSASAEITYNDFINKELILFSMADNMRSIPSVIDGLKPGQRKVMYTCF 839
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN +++VKV +LAGSV+ +AY +GE SL TII LAQNFVGSNN+N+L+P G FG+ L
Sbjct: 840 RRNLKKDVKVVELAGSVSGLTAYPYGETSLQQTIIGLAQNFVGSNNMNILEPSGNFGSRL 899
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY EY+T TV F++ M KL + E D L +FKL T A +++ AFD G + K+ T
Sbjct: 1061 DYTEYNTPETVNFIIKMEEKKLAEHE-DKLEDLFKLSKTQATTNLVAFDPQGRIHKYATP 1119
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I++EFY VRL+ Y +RK YL + E K TNQARFI G+L + +KK ++A
Sbjct: 1120 LDIMEEFYNVRLQKYDQRKMYLLSEMERELRKFTNQARFISMIIKGELVVSKKKKAVLVA 1179
Query: 339 ELIKRKYDSDP 349
EL K +D P
Sbjct: 1180 ELQKLNFDRFP 1190
>gi|353242005|emb|CCA73780.1| probable DNA topoisomerase II [Piriformospora indica DSM 11827]
Length = 1521
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 116/178 (65%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++AK YFS+M H I F + D I MAFSKK V+ERK WL ++
Sbjct: 727 GLGTSEDQDAKAYFSDMPTHMIPFSKLREEDRQLIDMAFSKKKVEERKEWLRNFVPGT-- 784
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
YL I Y+EF+NKELILFS DN RSIPS+ DGLKP RKV+F C
Sbjct: 785 ---------YL-NHNRDEIPYSEFINKELILFSMADNARSIPSMVDGLKPSQRKVVFACF 834
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR + E+KV QL G + EH+A+HHG+ SL TI+NLAQ+FVGSNNINLL P GQFGT
Sbjct: 835 KRKLKGEIKVNQLMGYIGEHTAHHHGDASLHQTIVNLAQHFVGSNNINLLYPAGQFGT 892
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 91/145 (62%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHT T+V FVVTMS + +AE +GL K FKL +++ S+M FD G + K++T
Sbjct: 1044 DYREYHTTTSVSFVVTMSEKDVARAEKEGLEKFFKLTASISTSNMICFDSAGKIHKYETP 1103
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++FY +RL++YAKRK ++ + E +L NQARF+ D L + NRKK++++
Sbjct: 1104 EDILEDFYHLRLQWYAKRKQHVSNEMELELDRLNNQARFVQMIVDKKLVVANRKKEDIVK 1163
Query: 339 ELIKRKYDSDPVKSWKMKQNKENAL 363
EL + ++ P KQ+ A+
Sbjct: 1164 ELRELQFTPFPKSPKTKKQDDTEAV 1188
>gi|66814704|ref|XP_641531.1| DNA topoisomerase II [Dictyostelium discoideum AX4]
gi|166210410|sp|P90520.2|TOP2M_DICDI RecName: Full=DNA topoisomerase 2, mitochondrial; Short=DNA
topoisomerase II; Flags: Precursor
gi|60469558|gb|EAL67548.1| DNA topoisomerase II [Dictyostelium discoideum AX4]
Length = 1284
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 123/180 (68%), Gaps = 13/180 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS EAKEYFSN+++H I F + GD D I+MAF+K L R+ W+ +
Sbjct: 723 GLGTSTSAEAKEYFSNLDKHVIKFIW-GDEADDLIKMAFAKDLSSLRQRWI--------K 773
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+M G D+ + K ITY +F+NKELI +S N RSIPSL DGLKPG RK+LF
Sbjct: 774 ETDMSQGIDH----SIKEITYPDFINKELIHYSWAANLRSIPSLIDGLKPGQRKILFASF 829
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR E+KV+QL+G VAE ++YHHGEQSL STI+ +A NFVGSNN+ LL P GQFGT L
Sbjct: 830 KRRLTNEIKVSQLSGYVAEQTSYHHGEQSLNSTIVKMAHNFVGSNNLPLLTPSGQFGTRL 889
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAE---MDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
++E +T+ +V F + ++ ++L + E + L K+FKL +L C FD + K +
Sbjct: 1045 FQESNTENSVHFTILLNNNQLEQMEDLTENELIKLFKLSASLNFHLTC-FDENSKIQKLE 1103
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
+ +I+ +FY VRL++Y KR++YL L + +LT +F+ G L+I+ R K+++
Sbjct: 1104 SVEEIIDQFYKVRLQFYGKRREYLLKSLDNQIKRLTTTIQFLEVIASGKLKIQGRSKQDL 1163
Query: 337 IAEL 340
I EL
Sbjct: 1164 IKEL 1167
>gi|241955060|ref|XP_002420251.1| DNA topoisomerase 2, putative [Candida dubliniensis CD36]
gi|223643592|emb|CAX42474.1| DNA topoisomerase 2, putative [Candida dubliniensis CD36]
Length = 1461
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 118/178 (66%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST EA+EYF+ ++RH F D +I +AFSKK DERK WL ++
Sbjct: 664 GLGTSTPMEAREYFTALDRHLKRFHALQGEDKNYIDLAFSKKKADERKEWLQGFLPGTHL 723
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E+ I ++F+NKELILFS DN RSIPS+ DG KPG RKVL+ C
Sbjct: 724 DPEI------------TEIPISDFINKELILFSMSDNVRSIPSVLDGFKPGQRKVLYGCF 771
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+ R E+KVAQLAG V+E++ YHHGEQSL+ TII LAQNF+GSNNIN+L+P G FG+
Sbjct: 772 KKKLRSEIKVAQLAGYVSENTGYHHGEQSLVQTIIGLAQNFIGSNNINVLKPNGSFGS 829
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 90/139 (64%), Gaps = 6/139 (4%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E+HT T+++FVV ++ ++ K+ GL + FKL ++L++++M AFD G + K++
Sbjct: 991 DMEEHHT-TSIRFVVKLTDAEMQKSLRIGLLERFKLVSSLSLANMVAFDPMGRIKKYNDV 1049
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I+K+FY VRLEYY KRKDY+ L + L L+ QARFI + L + N+KKK+++A
Sbjct: 1050 LEIIKDFYYVRLEYYQKRKDYMTDNLQNQLLMLSEQARFIKMIIEKQLSVANKKKKQLVA 1109
Query: 339 ELIKRKY-----DSDPVKS 352
L + + D P+KS
Sbjct: 1110 LLEEHNFTKFSKDGKPIKS 1128
>gi|225678456|gb|EEH16740.1| DNA topoisomerase [Paracoccidioides brasiliensis Pb03]
Length = 1788
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 125/180 (69%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF ++++H F DN+ I +AFSKK DERK WL R
Sbjct: 729 GLGTSTTEDAEIYFQDLDKHLKQFHVMQDNEAQLIDLAFSKKKADERKEWL--------R 780
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ TT+ ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+TC
Sbjct: 781 QFKPGTFLDH----TTEEITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTCF 836
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R+++KV +LAG V+ +AY HG+ SL TI+ LAQ FVGSNN+N L+P G FG+ L
Sbjct: 837 KRNVRKDIKVVELAGYVSGMTAYQHGDVSLQQTIVGLAQTFVGSNNVNCLEPSGNFGSRL 896
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 80/127 (62%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V FV+ + KA +GL + FKL T+A S++ AFD G +TK+D+
Sbjct: 1056 DYKDYNTHTKVHFVIQLDEKHAAKAIAEGLEEKFKLSKTIATSNLVAFDPEGRITKYDSP 1115
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+EFY+VR+++Y KRK Y L + KL+NQARFI DG L I + K ++I
Sbjct: 1116 EDILREFYSVRIKFYEKRKQYQLSQLQRDLDKLSNQARFIQMIIDGKLVISKKPKAKLIQ 1175
Query: 339 ELIKRKY 345
EL ++ +
Sbjct: 1176 ELKEKGF 1182
>gi|430814552|emb|CCJ28239.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1482
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 120/180 (66%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS + K+YFS+++ H F + D I MAFSKK DERK WL R
Sbjct: 668 GLGTSYGNDVKKYFSDLDTHLKEFHSIREGDKELIDMAFSKKKADERKEWL--------R 719
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ G D+ T I ++F+NKELILFS DN RSIPS+ DGLKPG RKV+F C
Sbjct: 720 LFKPGTYMDH----TLDKIPISDFINKELILFSMADNIRSIPSVVDGLKPGQRKVIFGCF 775
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR + E+KVAQL+G ++EH+AYHHGEQSL TII LAQ FVGSNNINL++P GQFGT L
Sbjct: 776 KRKLKSEIKVAQLSGYISEHTAYHHGEQSLTQTIIGLAQTFVGSNNINLMKPNGQFGTRL 835
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 65/100 (65%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY EYHTDT V F++ ++ + ++ GL + FKL +++M AFD G + K+++
Sbjct: 995 DYSEYHTDTVVHFIIKLTEKGMAESLAQGLEEKFKLIKIQNMTNMVAFDSSGRIKKYNSV 1054
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFI 318
+IL EFY +RL++Y KRKDYL L ++ KL+NQ RF+
Sbjct: 1055 EEILLEFYNIRLQFYQKRKDYLVNELESQYNKLSNQVRFV 1094
>gi|1834317|dbj|BAA11510.1| DNA topoisomerase II [Dictyostelium discoideum]
Length = 1282
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 123/180 (68%), Gaps = 13/180 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS EAKEYFSN+++H I F + GD D I+MAF+K L R+ W+ +
Sbjct: 722 GLGTSTSAEAKEYFSNLDKHVIKFIW-GDEADDLIKMAFAKDLSSLRQRWI--------K 772
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+M G D+ + K ITY +F+NKELI +S N RSIPSL DGLKPG RK+LF
Sbjct: 773 ETDMSQGIDH----SIKEITYPDFINKELIHYSWAANLRSIPSLIDGLKPGQRKILFASF 828
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR E+KV+QL+G VAE ++YHHGEQSL STI+ +A NFVGSNN+ LL P GQFGT L
Sbjct: 829 KRRLTNEIKVSQLSGYVAEQTSYHHGEQSLNSTIVKMAHNFVGSNNLPLLTPSGQFGTRL 888
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAE---MDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
++E +T+ +V F + ++ ++L + E + L K+FKL +L C FD + K +
Sbjct: 1043 FQESNTENSVHFTILLNNNQLEQMEDLTENELIKLFKLSASLNFHLTC-FDENSKIQKLE 1101
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
+ +I+ +FY VRL++Y KR++YL L + +LT +F+ G L+I+ R K+++
Sbjct: 1102 SVEEIIDQFYKVRLQFYGKRREYLLKSLDNQIKRLTTTIQFLEVIASGKLKIQGRSKQDL 1161
Query: 337 IAEL 340
I EL
Sbjct: 1162 IKEL 1165
>gi|300176867|emb|CBK25436.2| unnamed protein product [Blastocystis hominis]
Length = 1573
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 118/181 (65%), Gaps = 12/181 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST +E KEYFSN+ RH + FK D++ +H+ M F KK V ERK W+ +
Sbjct: 623 GLGTSTPQEGKEYFSNLSRHLVPFKSITDDESSHLDMLFRKKRVAERKEWINQY------ 676
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ G DY K + Y++F++KELI FS DN RSIP + DGLKP RKVLF
Sbjct: 677 --QPGDYIDYAVDK----MAYSDFMDKELIQFSRYDNARSIPCVVDGLKPSQRKVLFGAF 730
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR E+KV Q +G V+EH+AYHHGEQSL TII +AQ+FVGSNNINL P GQFG+ L
Sbjct: 731 KRKLTSEIKVVQFSGYVSEHAAYHHGEQSLNDTIIGMAQDFVGSNNINLFVPAGQFGSRL 790
Query: 191 F 191
Sbjct: 791 L 791
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 78/129 (60%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D+KE HTDTTV F V ++P++ + L+K FKL+ + S+ F G +T + +
Sbjct: 949 DFKENHTDTTVHFTVMLTPEQAQALQGQDLYKFFKLEAAITTSNFNLFSSTGQITHYASP 1008
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I+ EF+ RL YY +RKD+L E +L+N RFI+E +G L I NR +K+++
Sbjct: 1009 QHIIDEFFEFRLPYYQERKDFLLAKFEKEIRRLSNMTRFILEVVEGKLIINNRPRKDIMQ 1068
Query: 339 ELIKRKYDS 347
+L+KRKYD
Sbjct: 1069 DLVKRKYDP 1077
>gi|295668785|ref|XP_002794941.1| DNA topoisomerase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285634|gb|EEH41200.1| DNA topoisomerase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1582
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 125/180 (69%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF ++++H F DN+ I +AFSKK DERK WL R
Sbjct: 615 GLGTSTTEDAEIYFQDLDKHLKQFHVMQDNEAQLIDLAFSKKKADERKEWL--------R 666
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ TT+ ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+TC
Sbjct: 667 QFKPGTFLDH----TTEEITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTCF 722
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R+++KV +LAG V+ +AY HG+ SL TI+ LAQ FVGSNN+N L+P G FG+ L
Sbjct: 723 KRNVRKDIKVVELAGYVSGMTAYQHGDVSLQQTIVGLAQTFVGSNNVNCLEPSGNFGSRL 782
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 79/142 (55%), Gaps = 8/142 (5%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V FV+ + KA +GL + FKL T+A S++ AFD G +TK+D+
Sbjct: 942 DYKDYNTHTKVHFVIQLDEKHAAKAIAEGLEEKFKLSKTIATSNLVAFDPEGRITKYDSP 1001
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+EFY+VR+++Y KRK L + KL Q I EK ++ ++N K +
Sbjct: 1002 EDILREFYSVRIKFYEKRKMPLWSLTQERVEKLRRQ---IGEK---EIEVDNLIK--LSK 1053
Query: 339 ELIKRKYDSDPVKSWKMKQNKE 360
E I RK D + WK + E
Sbjct: 1054 EDIWRKDLDDFIAEWKFQLEDE 1075
>gi|242772741|ref|XP_002478098.1| DNA topoisomerase II [Talaromyces stipitatus ATCC 10500]
gi|218721717|gb|EED21135.1| DNA topoisomerase II [Talaromyces stipitatus ATCC 10500]
Length = 1678
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 126/180 (70%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF +++RH F D++ I +AFSKK DERK WL R
Sbjct: 719 GLGTSTTEDAQIYFRDLDRHLKEFHTMQDHEAQLIDLAFSKKKADERKEWL--------R 770
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +TK ITYT+F+NKELILFS DN+RSIPS+ DGLKPG RKVL+TC
Sbjct: 771 QYKPGTFLDH----STKQITYTDFINKELILFSMADNQRSIPSVVDGLKPGQRKVLYTCF 826
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN ++++KV +LAG V+ +AY HG+ SL TI+ LAQ FVGSNN+N L+P G FG+ L
Sbjct: 827 KRNVKKDMKVVELAGHVSGMTAYQHGDTSLQQTIVGLAQTFVGSNNLNCLEPSGNFGSRL 886
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 81/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V FV+ M L A +GL + FKL T+A S++ AFD G +TK+ T
Sbjct: 1046 DYKDYNTHTKVHFVIQMDEKHLKAAVSEGLEEKFKLSRTIATSNLVAFDPEGRITKYATV 1105
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ ILKEFYAVRL+YY +RK + L E K TNQARF+ DG L I +KK +IA
Sbjct: 1106 SDILKEFYAVRLKYYERRKQHQLSELQKELDKFTNQARFVQMIIDGKLVISKKKKPVLIA 1165
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1166 ELKEKGFKPFP 1176
>gi|18369822|dbj|BAB84106.1| DNA topoisomerase II [Talaromyces flavus var. flavus]
Length = 1094
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 97/180 (53%), Positives = 125/180 (69%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF +++RH F DN+ A I +AFSKK DERK WL R
Sbjct: 590 GLGTSTTEDAQVYFRDLDRHLKEFHTIQDNEAALIELAFSKKKADERKEWL--------R 641
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ G D+ +K ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+TC
Sbjct: 642 QFRPGTYLDHTLSK----ITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTCF 697
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN ++++KV +LAG V+ +AY HG+ SL TI+ LAQNFVGSNNIN L+P G FG+ L
Sbjct: 698 RRNLKKDMKVVELAGHVSGMTAYQHGDASLQQTIVGLAQNFVGSNNINCLEPSGNFGSRL 757
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T V FV+ M + A +GL + FKL ++A S++ AFD G +TK+
Sbjct: 917 DYKDYNTHHKVHFVIQMDEKHMTAALSEGLEEKFKLTKSIATSNLVAFDPEGRITKYAGV 976
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ ILKEFY +RL+YY +RK Y + E +L+NQARF+ DGDL + +KK ++A
Sbjct: 977 DDILKEFYTIRLKYYERRKQYQLSEMQRELDRLSNQARFVQMIIDGDLVVSKKKKSALVA 1036
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1037 ELKEKNFKPFP 1047
>gi|226294840|gb|EEH50260.1| DNA topoisomerase [Paracoccidioides brasiliensis Pb18]
Length = 1760
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 125/180 (69%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF ++++H F DN+ I +AFSKK DERK WL R
Sbjct: 792 GLGTSTTEDAEIYFQDLDKHLKQFHVMQDNEAQLIDLAFSKKKADERKEWL--------R 843
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ TT+ ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+TC
Sbjct: 844 QFKPGTFLDH----TTEEITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTCF 899
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R+++KV +LAG V+ +AY HG+ SL TI+ LAQ FVGSNN+N L+P G FG+ L
Sbjct: 900 KRNVRKDIKVVELAGYVSGMTAYQHGDVSLQQTIVGLAQTFVGSNNVNCLEPSGNFGSRL 959
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 79/142 (55%), Gaps = 8/142 (5%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V FV+ + KA +GL + FKL T+A S++ AFD G +TK+D+
Sbjct: 1119 DYKDYNTHTKVHFVIQLDEKHAAKAIAEGLEEKFKLSKTIATSNLVAFDPEGRITKYDSP 1178
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+EFY+VR+++Y KRK L + KL Q I EK ++ ++N K +
Sbjct: 1179 EDILREFYSVRIKFYEKRKMPLWSLTQERVEKLRRQ---IGEK---EIEVDNLIK--LSK 1230
Query: 339 ELIKRKYDSDPVKSWKMKQNKE 360
E I RK D + WK + E
Sbjct: 1231 EDIWRKDLDDFIAEWKFQLEDE 1252
>gi|18369820|dbj|BAB84105.1| DNA topoisomerase II [Talaromyces marneffei]
Length = 1162
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 126/180 (70%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF +++RH F D++ I +AFSKK DERK WL R
Sbjct: 609 GLGTSTTEDAQIYFRDLDRHLKEFHTMQDHEAQLIDLAFSKKKADERKEWL--------R 660
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +TK ITYT+F+NKELILFS DN+RSIPS+ DGLKPG RKVL+TC
Sbjct: 661 QYKPGTFLDH----STKQITYTDFINKELILFSMADNQRSIPSVVDGLKPGQRKVLYTCF 716
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN ++++KV +LAG V+ +AY HGE SL TI+ LAQ FVGSNN+N L+P G FG+ L
Sbjct: 717 KRNLKKDMKVVELAGHVSGMTAYQHGETSLQQTIVGLAQTFVGSNNLNCLEPSGNFGSRL 776
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V FV+ M L A +GL + FKL T+A +++ AFD G +TK+ T
Sbjct: 936 DYKDYNTHTKVHFVIQMDEKHLKAAVEEGLEEKFKLSRTIATTNLVAFDPEGRITKYATV 995
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ ILKEF+AVRL+YY +RK + L + K TNQARFI DG L + +KK +I
Sbjct: 996 SDILKEFFAVRLKYYERRKQHQLSELQKQLDKFTNQARFIQMIIDGKLVVSKKKKATLIT 1055
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1056 ELKEKGFKPFP 1066
>gi|10281020|dbj|BAB13751.1| type II DNA topoisomerase [Candida dubliniensis]
Length = 782
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 118/178 (66%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST EA+EYF+ ++RH F D +I +AFSKK DERK WL ++
Sbjct: 569 GLGTSTPMEAREYFTALDRHLKRFHALQGEDKNYIDLAFSKKKADERKEWLQGFLPGTHL 628
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E+ I ++F+NKELILFS DN RSIPS+ DG KPG RKVL+ C
Sbjct: 629 DPEI------------TEIPISDFINKELILFSMSDNVRSIPSVLDGFKPGQRKVLYGCF 676
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+ R E+KVAQLAG V+E++ YHHGEQSL+ TII LAQNF+GSNNIN+L+P G FG+
Sbjct: 677 KKKLRSEIKVAQLAGYVSENTGYHHGEQSLVPTIIGLAQNFIGSNNINVLKPNGSFGS 734
>gi|346323318|gb|EGX92916.1| DNA topoisomerase 2 [Cordyceps militaris CM01]
Length = 1614
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/182 (52%), Positives = 124/182 (68%), Gaps = 12/182 (6%)
Query: 9 IAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEEC 68
+ GLG+S++++A+ YF+N+++H F+ + +AFSKK D RK WL ++
Sbjct: 710 LKGLGSSSNEDAQVYFTNLDQHLKEFEVMQPEEAQLFDLAFSKKKADARKEWLGNFVPGT 769
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
YL TKAITYT+FVNKELILFS DN RSIPS+ DGLKPG RKV+++
Sbjct: 770 -----------YL-DHGTKAITYTDFVNKELILFSMADNMRSIPSVADGLKPGQRKVMYS 817
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
C KRN ++ KV +L+G V+E SAYHHGEQSL TII LAQ FVGSNNINLL+P G FG+
Sbjct: 818 CFKRNLTKDKKVVELSGYVSEQSAYHHGEQSLQQTIIGLAQTFVGSNNINLLEPSGMFGS 877
Query: 189 FL 190
L
Sbjct: 878 RL 879
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 81/142 (57%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE++ TV F + + + K +GL + FKLQ +A S++ AFD G + K+D
Sbjct: 1049 DYKEFNDHNTVHFEIMVDEKYMDKVLEEGLLERFKLQKQVATSNLVAFDIQGRIRKYDKV 1108
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I++EFY RL+ Y +RK Y VL + +L NQARFI E L + ++K+ ++
Sbjct: 1109 EDIMEEFYLYRLDMYLERKKYWLNVLHRDYRRLKNQARFIQEIISNVLVVGKKRKQILVK 1168
Query: 339 ELIKRKYDSDPVKSWKMKQNKE 360
EL RKY++ P K K ++E
Sbjct: 1169 ELRDRKYEAFPPKKTGAKADEE 1190
>gi|365987970|ref|XP_003670816.1| hypothetical protein NDAI_0F02550 [Naumovozyma dairenensis CBS 421]
gi|343769587|emb|CCD25573.1| hypothetical protein NDAI_0F02550 [Naumovozyma dairenensis CBS 421]
Length = 1420
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 117/178 (65%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ +E +EYF ++++H F +D I +AFSKK D+RK WL R
Sbjct: 604 GLGTSSGQEVREYFKDLDKHLKTFHALQGHDKDLIDLAFSKKKADDRKEWL--------R 655
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D I ++F+NKELILFS DN RSIPS+ DG KPG RKVLF C
Sbjct: 656 LYEPGTVLD----PKISEIPISDFINKELILFSLADNIRSIPSVLDGFKPGQRKVLFGCF 711
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN R E+KVAQLA VAE SAYHHGEQSL TII LAQNFVGSNNINLL+P G FGT
Sbjct: 712 KRNLRSEIKVAQLAPYVAECSAYHHGEQSLAMTIIGLAQNFVGSNNINLLKPNGAFGT 769
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H + +KF++ ++P+++ K G ++ F+L + +++ +M AFD G + K+++
Sbjct: 932 DMEEQHGND-IKFIIKLTPEEMEKTRKIGFYERFRLISPISLMNMVAFDPRGKIKKYESV 990
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL EF+ VRLEYY KRKD++ L E KL+ Q +FI + +L + N+ +K +I
Sbjct: 991 FDILTEFFYVRLEYYQKRKDFMSERLQWEVEKLSFQVKFIKMIIERELIVTNKPRKNIIK 1050
Query: 339 EL 340
EL
Sbjct: 1051 EL 1052
>gi|330793204|ref|XP_003284675.1| hypothetical protein DICPUDRAFT_28071 [Dictyostelium purpureum]
gi|325085373|gb|EGC38781.1| hypothetical protein DICPUDRAFT_28071 [Dictyostelium purpureum]
Length = 1260
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 122/180 (67%), Gaps = 13/180 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS EAKEYFS++ +H I FK+ D D +I +AFSK R+TW+ +
Sbjct: 714 GLGTSTSAEAKEYFSDLGKHVIKFKWDKDTD-KYISLAFSKDSSSLRQTWI--------K 764
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+M G D+ T K +T+ +F+NKELI FS N RSIPSL DGLKPG RK+LF
Sbjct: 765 ESDMSQGIDH----TIKEMTFPDFINKELIHFSWAANIRSIPSLIDGLKPGQRKILFASF 820
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR E+KV+QL+G VAE ++YHHGEQSL STII +A NFVGSNNI LL P GQFGT L
Sbjct: 821 KRRLTSEIKVSQLSGYVAEQTSYHHGEQSLNSTIIKMAHNFVGSNNIPLLTPSGQFGTRL 880
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 73/126 (57%), Gaps = 8/126 (6%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDGLHK-----VFKLQTTLAISSMCAFDRYGVLTK 274
++E +T+ +V F + +S ++ EM+ L + +FKL + L ++ + FD + K
Sbjct: 1036 FQEANTENSVHFNILLSNQQME--EMEDLSENEMITLFKLSSNLHLN-LTVFDEKNKIVK 1092
Query: 275 FDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKK 334
+++ +I+ F+ +RLE+Y KR+ +L L + +L++ +F+ G L+I+ R K+
Sbjct: 1093 YESPEEIIDHFFNIRLEFYNKRRSHLMASLTQQIKRLSSTIKFLETIASGKLKIQGRTKQ 1152
Query: 335 EMIAEL 340
++I +L
Sbjct: 1153 QLIDDL 1158
>gi|2501297|sp|P87078.1|TOP2_CANAL RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
II
gi|2113829|emb|CAA71405.1| topoisomerase II [Candida albicans]
Length = 1461
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 117/178 (65%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST EA+EYF+ ++RH F D +I +AFSKK DERK WL ++
Sbjct: 664 GLGTSTPMEAREYFTALDRHLKRFHALQGEDKDYIDLAFSKKKADERKEWLQGFLPGTHL 723
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E+ I ++F+NKE ILFS DN RSIPS+ DG KPG RKVL+ C
Sbjct: 724 DPEI------------TEIPISDFINKEFILFSMSDNVRSIPSVLDGFKPGQRKVLYGCF 771
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+ R E+KVAQLAG V+E++ YHHGEQSL+ TII LAQNFVGSNNIN+L+P G FG+
Sbjct: 772 KKKLRSEIKVAQLAGYVSENTGYHHGEQSLVQTIIGLAQNFVGSNNINVLKPNGSFGS 829
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 90/139 (64%), Gaps = 6/139 (4%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E+HT T+++FVV ++ ++ K+ GL + FKL ++L++++M AFD G + K++
Sbjct: 991 DMEEHHT-TSIRFVVKLTDAEMQKSLRIGLLERFKLVSSLSLANMVAFDPMGRIKKYNDV 1049
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I+K+FY VRLEYY KRKDY+ L + L L+ QARFI + L + N+KKK+++A
Sbjct: 1050 LEIIKDFYYVRLEYYQKRKDYMTDNLQNQLLMLSEQARFIKMIIEKQLSVANKKKKQLVA 1109
Query: 339 ELIKRKY-----DSDPVKS 352
L + + D P+KS
Sbjct: 1110 LLEEHNFTKFSKDGKPIKS 1128
>gi|18369808|dbj|BAB84099.1| DNA topoisomerase II [Aspergillus candidus]
Length = 1096
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 126/180 (70%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF +++RH F D++ I +AFSKK DERK WL R
Sbjct: 591 GLGTSTTEDAQIYFRDLDRHLKEFHTMQDHEAQLIDLAFSKKKADERKEWL--------R 642
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +TK ITYT+F+NKELILFS DN+RSIPS+ DGLKPG RKVL+TC
Sbjct: 643 QYKPGTFLDH----STKQITYTDFINKELILFSMADNQRSIPSVVDGLKPGQRKVLYTCF 698
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN ++++KV +LAG V+ +AY HG+ SL TI+ LAQ FVGSNN+N L+P G FG+ L
Sbjct: 699 KRNVKKDMKVVELAGHVSGMTAYQHGDTSLQQTIVGLAQTFVGSNNLNCLEPSGNFGSRL 758
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 82/131 (62%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V FV+ M L A +GL + FKL T+A +++ AFD G +TK+ T
Sbjct: 918 DYKDYNTHTKVHFVIQMDEKHLKSAVEEGLEEKFKLSKTIATTNLVAFDPEGRITKYATV 977
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ ILKEF+AVRL+YY +RK + L + KLTNQARF+ DG L + +KK +I
Sbjct: 978 SDILKEFFAVRLKYYERRKQHQLSELQKDLDKLTNQARFVQMIIDGKLVVSKKKKSILIT 1037
Query: 339 ELIKRKYDSDP 349
EL ++ + + P
Sbjct: 1038 ELKEKGFKAFP 1048
>gi|167391639|ref|XP_001739872.1| DNA topoisomerase [Entamoeba dispar SAW760]
gi|165896290|gb|EDR23749.1| DNA topoisomerase, putative [Entamoeba dispar SAW760]
Length = 1351
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +AK YFS+++ H+I F Y G + D I +AF++K D+RK WL
Sbjct: 588 GLGTSKDSDAKAYFSDLDTHKIKFAYDGASSDEVIDLAFNRKRADDRKEWLK-------- 639
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G + + +I+Y +FV+KELILFS D ERSIPS+ DGLKP RKVL+TCL
Sbjct: 640 ----GYDPNTYLDQDVDSISYEDFVHKELILFSYDDCERSIPSVVDGLKPSQRKVLWTCL 695
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
++N +E+KV+QL+G V+E S+YHHGE SL +TI+N+AQNF GSNN+N L P GQFG+ L
Sbjct: 696 EKNIMKELKVSQLSGLVSEKSSYHHGEVSLQATIVNMAQNFCGSNNVNWLLPSGQFGSRL 755
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 6/139 (4%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTN 279
Y EYH TV FV+ D + + + KL +++ ++M F+ +TK+ T
Sbjct: 913 YSEYHMVNTVHFVI----DLVQPMSDEDIWTNLKLVSSVKTTNMHLFNSEYKITKYHTVL 968
Query: 280 QILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAE 339
IL EF VR++ Y +RK + + + + L+N+ RFI +GDL I NRKK E+ +
Sbjct: 969 DILAEFCDVRMKGYEERKKAIIESMERQLMILSNKVRFIKMVIEGDLIINNRKKNELYKD 1028
Query: 340 LIKRKYDS--DPVKSWKMK 356
LIK +D DP K+ K K
Sbjct: 1029 LIKLGFDQIRDPKKANKSK 1047
>gi|67472224|ref|XP_651972.1| DNA topoisomerase II [Entamoeba histolytica HM-1:IMSS]
gi|40804954|gb|AAR91745.1| topoisomerase II [Entamoeba histolytica]
gi|56468768|gb|EAL46584.1| DNA topoisomerase II, putative [Entamoeba histolytica HM-1:IMSS]
Length = 1349
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 122/180 (67%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +AK YFS+++ H+I F Y G D I +AF++K D+RK WL
Sbjct: 588 GLGTSKDSDAKAYFSDLDTHKIKFAYDGAGSDEVIDLAFNRKRADDRKEWLK-------- 639
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G + + +I+Y +FV+KELILFS D ERSIPS+ DGLKP RKVL+TCL
Sbjct: 640 ----GYDPNTYLDQDVDSISYEDFVHKELILFSYDDCERSIPSVVDGLKPSQRKVLWTCL 695
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
++N +E+KV+QL+G V+E S+YHHGE SL +TI+N+AQNF GSNN+N L P GQFG+ L
Sbjct: 696 EKNIMKELKVSQLSGLVSEKSSYHHGEVSLQATIVNMAQNFCGSNNVNWLLPSGQFGSRL 755
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 6/139 (4%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTN 279
Y EYH TV FV+ D + + + KL +++ ++M F+ +TK+ T
Sbjct: 913 YSEYHMVNTVHFVI----DLVQPMSDEDIWTNLKLVSSVKTTNMHLFNSEYKITKYHTVL 968
Query: 280 QILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAE 339
IL EF VR++ Y +RK + + + + L+N+ARFI +G+L + NRKK E+ +
Sbjct: 969 DILSEFCDVRMKGYEERKKAIIESMERQLMILSNKARFIKMVIEGELIVNNRKKNELYKD 1028
Query: 340 LIKRKYDS--DPVKSWKMK 356
LIK +D DP K+ K K
Sbjct: 1029 LIKFGFDQIRDPKKANKSK 1047
>gi|407035214|gb|EKE37602.1| DNA gyrase/topoisomerase IV, A subunit domain containing protein
[Entamoeba nuttalli P19]
Length = 1350
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 122/180 (67%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +AK YFS+++ H+I F Y G D I +AF++K D+RK WL
Sbjct: 588 GLGTSKDSDAKAYFSDLDTHKIKFAYDGAGSDEVIDLAFNRKRADDRKEWLK-------- 639
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G + + +I+Y +FV+KELILFS D ERSIPS+ DGLKP RKVL+TCL
Sbjct: 640 ----GYDPNTYLDQDVDSISYEDFVHKELILFSYDDCERSIPSVVDGLKPSQRKVLWTCL 695
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
++N +E+KV+QL+G V+E S+YHHGE SL +TI+N+AQNF GSNN+N L P GQFG+ L
Sbjct: 696 EKNIMKELKVSQLSGLVSEKSSYHHGEVSLQATIVNMAQNFCGSNNVNWLLPSGQFGSRL 755
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 6/139 (4%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTN 279
Y EYH TV FV+ D + + + KL +++ ++M F+ +TK+ T
Sbjct: 913 YSEYHMVNTVHFVI----DLVQPMSDEDIWTNLKLVSSVKTTNMHLFNSEYKITKYHTVL 968
Query: 280 QILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAE 339
IL EF VR++ Y +RK + + + + L+N+ARFI +G+L + NRKK E+ +
Sbjct: 969 DILAEFCDVRMKGYEERKKAIIESMERQLMILSNKARFIKMVIEGELIVNNRKKNELYKD 1028
Query: 340 LIKRKYDS--DPVKSWKMK 356
LIK +D DP K+ K K
Sbjct: 1029 LIKFGFDQIRDPKKANKSK 1047
>gi|449706302|gb|EMD46177.1| DNA topoisomerase II, putative [Entamoeba histolytica KU27]
Length = 1422
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 122/180 (67%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +AK YFS+++ H+I F Y G D I +AF++K D+RK WL
Sbjct: 588 GLGTSKDSDAKAYFSDLDTHKIKFAYDGAGSDEVIDLAFNRKRADDRKEWLK-------- 639
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G + + +I+Y +FV+KELILFS D ERSIPS+ DGLKP RKVL+TCL
Sbjct: 640 ----GYDPNTYLDQDVDSISYEDFVHKELILFSYDDCERSIPSVVDGLKPSQRKVLWTCL 695
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
++N +E+KV+QL+G V+E S+YHHGE SL +TI+N+AQNF GSNN+N L P GQFG+ L
Sbjct: 696 EKNIMKELKVSQLSGLVSEKSSYHHGEVSLQATIVNMAQNFCGSNNVNWLLPSGQFGSRL 755
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 6/139 (4%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTN 279
Y EYH TV FV+ D + + + KL +++ ++M F+ +TK+ T
Sbjct: 913 YSEYHMVNTVHFVI----DLVQPMSDEDIWTNLKLVSSVKTTNMHLFNSEYKITKYHTVL 968
Query: 280 QILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAE 339
IL EF VR++ Y +RK + + + + L+N+ARFI +G+L + NRKK E+ +
Sbjct: 969 DILSEFCDVRMKGYEERKKAIIESMERQLMILSNKARFIKMVIEGELIVNNRKKNELYKD 1028
Query: 340 LIKRKYDS--DPVKSWKMK 356
LIK +D DP K+ K K
Sbjct: 1029 LIKFGFDQIRDPKKANKSK 1047
>gi|401623896|gb|EJS41976.1| top2p [Saccharomyces arboricola H-6]
Length = 1427
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 120/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +K+ +EYFSN+++H +F ND +I +AFSKK D+RK WL R
Sbjct: 604 GLGTSLAKDIREYFSNLDKHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWL--------R 655
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D T K I ++F+NKELILFS DN RSIP++ DG KPG RKVL+ C
Sbjct: 656 QYEPGTVLD----PTLKEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCF 711
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N + E+KVAQLA V E +AYHHGE+SL TII LAQNFVGSNNI LL P G FGT
Sbjct: 712 KKNLKSEIKVAQLAPYVGECTAYHHGEESLAQTIIGLAQNFVGSNNIYLLLPNGAFGT 769
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H D +KF++T+SP+++ K G ++ FKL +++ +M AFD G + K+++
Sbjct: 932 DMEEQHNDN-IKFIITLSPEEMAKTRKIGFYERFKLIAPISLRNMVAFDPSGKIKKYNSV 990
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
N+IL EFY +RLEYY KRKD++ +L E K + Q +FI + +L + N+ +K +I
Sbjct: 991 NEILSEFYYIRLEYYQKRKDHMSEILQWEVEKYSFQVKFIKMIIEKELVVTNKPRKAIIQ 1050
Query: 339 EL 340
EL
Sbjct: 1051 EL 1052
>gi|444320547|ref|XP_004180930.1| hypothetical protein TBLA_0E03570 [Tetrapisispora blattae CBS 6284]
gi|387513973|emb|CCH61411.1| hypothetical protein TBLA_0E03570 [Tetrapisispora blattae CBS 6284]
Length = 1368
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 118/178 (66%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST +E +EYFS++++H F ND I +AFSKK D+RK WL R
Sbjct: 601 GLGTSTGQEMREYFSDLDKHLKQFHALEGNDKDLIDLAFSKKKADDRKEWL--------R 652
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D T K I ++F+NKELILFS DN RSIP++ DG KPG RKV+F C
Sbjct: 653 QHEPGTVLD----PTIKEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVMFGCF 708
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN R E+KVAQLA V E +AYHHGEQSL TII +AQNFVG+NNI LL P G FGT
Sbjct: 709 KRNLRSEIKVAQLAPYVGECTAYHHGEQSLAQTIIGMAQNFVGTNNIYLLIPNGAFGT 766
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H + +KF++ ++P+++ K G ++ FKL + +++++M AFD G + K++
Sbjct: 929 DMEEQHGNF-IKFIIKLTPEEMQKTRKIGFYERFKLISPISLNNMVAFDPQGRIKKYENP 987
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ILKEFY VRLEYY KRKDY+ L + KL+ Q +FI + +L + N KK++I
Sbjct: 988 QEILKEFYYVRLEYYQKRKDYMCEKLQWDVEKLSFQVKFIKMIIEKELVVSNIPKKQIIK 1047
Query: 339 EL 340
EL
Sbjct: 1048 EL 1049
>gi|410083495|ref|XP_003959325.1| hypothetical protein KAFR_0J01230 [Kazachstania africana CBS 2517]
gi|372465916|emb|CCF60190.1| hypothetical protein KAFR_0J01230 [Kazachstania africana CBS 2517]
Length = 1425
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 117/178 (65%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST +E KEYFS+++RH F ND I +AFSKK D+RK WL R
Sbjct: 603 GLGTSTGQEVKEYFSDLDRHLKKFHTLQGNDKDLIDLAFSKKKADDRKEWL--------R 654
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D I ++F+NKELILFS DN RSIP++ DG KPG RKVL+ C
Sbjct: 655 QYEPGTVLD----PRINEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCF 710
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+RN R E+KVAQLA V E +AYHHGEQSL TII+LAQNFVGSNNI LL P G FGT
Sbjct: 711 RRNLRSEIKVAQLAPYVGECTAYHHGEQSLAQTIISLAQNFVGSNNIYLLMPNGAFGT 768
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H +T+KF++T++ +++ K + G ++ FKL + +++ +M AFD YG + K++
Sbjct: 931 DMEEQHG-STIKFIITLTDEEMAKTKKVGFYERFKLISPMSLMNMVAFDPYGKIKKYEAV 989
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
N+IL +++ VRLEYY KRKDY+ L E K + Q +FI + +L + N+ +K +I
Sbjct: 990 NEILTDYFYVRLEYYQKRKDYMSERLQWEVEKYSYQVKFIKMIIERELIVTNKPRKTIIQ 1049
Query: 339 EL 340
EL
Sbjct: 1050 EL 1051
>gi|366995499|ref|XP_003677513.1| hypothetical protein NCAS_0G02740 [Naumovozyma castellii CBS 4309]
gi|342303382|emb|CCC71161.1| hypothetical protein NCAS_0G02740 [Naumovozyma castellii CBS 4309]
Length = 1412
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 120/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E +EYF ++++H F ND I +AFSKK D+RK WL R
Sbjct: 604 GLGTSLAQEIREYFRDLDKHLKTFHSLQGNDKDLIDLAFSKKKADDRKEWL--------R 655
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D + I ++F+NKELILFS DN RSIP++ DG KPG RKVLF C
Sbjct: 656 QYEPGTVLD----SSLNEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLFGCF 711
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN R E+KVAQLA +VAE ++YHHGEQSL TII +AQNFVG+NNINLL+P G FGT
Sbjct: 712 KRNLRSEIKVAQLAPNVAEATSYHHGEQSLALTIIGMAQNFVGANNINLLKPNGAFGT 769
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 81/122 (66%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E+H DT +KF++T++P+++ K + G ++ FKL + +++ +M AFD G + K++T
Sbjct: 932 DMEEHHGDT-IKFIITLTPEEMEKTKKIGFYERFKLTSPISLMNMVAFDARGKIKKYETV 990
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL +FY VRLEYY KRKDY+ L E KL+ Q +FI D L + N+ +K++I
Sbjct: 991 FEILNDFYYVRLEYYQKRKDYMSERLQWEVEKLSYQVKFIKMIIDRALTVTNKPRKDIIK 1050
Query: 339 EL 340
EL
Sbjct: 1051 EL 1052
>gi|149234581|ref|XP_001523170.1| DNA topoisomerase 2 [Lodderomyces elongisporus NRRL YB-4239]
gi|146453279|gb|EDK47535.1| DNA topoisomerase 2 [Lodderomyces elongisporus NRRL YB-4239]
Length = 1492
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 118/178 (66%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST EA+EYF+ ++RH F D + I +AFSKK D+RK WL ++
Sbjct: 683 GLGTSTPLEAREYFTALDRHLKRFHALQGEDASCIDLAFSKKKADDRKEWLQNFVPGDNL 742
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
EM I ++F+NKELILFS DN RSIPS+ DGLKPG RK+L+ C
Sbjct: 743 DPEMN------------EIPISDFINKELILFSMSDNVRSIPSMLDGLKPGQRKILYGCF 790
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR + E+KVAQLA VA+ S+YHHGEQSL+ TII +AQNFVGSNNINLL+P G FG+
Sbjct: 791 KRKLKNEIKVAQLAAYVADVSSYHHGEQSLVQTIIAMAQNFVGSNNINLLKPNGAFGS 848
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 82/127 (64%), Gaps = 1/127 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E HT T+++FVV +S ++ KA GL + FKL +T+++++M AFD +G + K+
Sbjct: 1010 DMEEQHT-TSIRFVVKLSDAEMAKALSVGLLEKFKLVSTISLANMVAFDPHGRIKKYLDV 1068
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I+K+FY VRLEYY KRK+++ +L + ++ QARFI D L + N+KKKE+I
Sbjct: 1069 LDIVKDFYFVRLEYYEKRKNHMLEILQHKHSMISEQARFIKMIIDKQLSVANKKKKELIG 1128
Query: 339 ELIKRKY 345
L K+
Sbjct: 1129 ILEANKF 1135
>gi|224007305|ref|XP_002292612.1| DNA topoisomerase [Thalassiosira pseudonana CCMP1335]
gi|220971474|gb|EED89808.1| DNA topoisomerase [Thalassiosira pseudonana CCMP1335]
Length = 1179
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 122/182 (67%), Gaps = 9/182 (4%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGD-NDDAHIRMAFSKKLVDERKTWLTTWMEECR 69
GLGTST EAK+YF + RH FK+ + ND I MAF K ++RK W+ T +E
Sbjct: 625 GLGTSTPTEAKDYFLSFVRHYRPFKWQSEKNDGERIDMAFEKDRANDRKDWILTEYDE-- 682
Query: 70 RRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
+ + + E + +ITY +FV+ ELI FSN +N RS+P++ DGLKP RKVL+ C
Sbjct: 683 -KSAVTVDE-----RDGNSITYGDFVDNELIHFSNANNIRSLPNVVDGLKPSQRKVLYAC 736
Query: 130 LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTF 189
KRN + E+KVAQLAG AEH+AYHHGE SL STII +AQ+F GSNNINLL P GQFGT
Sbjct: 737 FKRNLKDEIKVAQLAGYCAEHTAYHHGEASLHSTIIGMAQDFCGSNNINLLTPSGQFGTR 796
Query: 190 LF 191
L
Sbjct: 797 LM 798
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 3/129 (2%)
Query: 216 ESNDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKF 275
E + + HT TTV F V ++ KL++ + K FKL+ L+ +M AF + ++
Sbjct: 951 EIKSFSQNHTTTTVSFNVKVNAAKLNRLLKGDMLKTFKLRKALSTRNMHAFTTDMKIARY 1010
Query: 276 DTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFI--VEKCDGDLRIENRKK 333
++ +I F+ VRL+ YA RK LE + A + N+ARFI V DL + RK
Sbjct: 1011 NSPEEIADAFFPVRLDLYADRKSVLESNMEYSASLMRNKARFIEAVSANKIDL-LHGRKS 1069
Query: 334 KEMIAELIK 342
KE L++
Sbjct: 1070 KEATTALLE 1078
>gi|255946696|ref|XP_002564115.1| DNA topoisomerase II top2-Penicillium chrysogenum [Penicillium
chrysogenum Wisconsin 54-1255]
gi|211591132|emb|CAP97358.1| DNA topoisomerase II top2-Penicillium chrysogenum [Penicillium
chrysogenum Wisconsin 54-1255]
Length = 1725
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 721 GLGTSTTEDAQVYFRDLDRHLKEFHTMQDGEAGLIELAFSKKKADERKEWL--------R 772
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ K ITYT+F+NKELILFS DN+RSIPS+ DGLKPG RKVL TC
Sbjct: 773 QFKPGTFLDHSVAK----ITYTDFINKELILFSMADNQRSIPSVVDGLKPGQRKVLHTCF 828
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN ++++KV +LAG V+ +AYHHG+ SL TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 829 RRNLKKDMKVVELAGHVSGMTAYHHGDVSLQQTIVGLAQTFVGSNNINCLEPSGNFGSRL 888
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 77/122 (63%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY++Y+T T V F++ + + A +GL + FKL T+A +++ AFD G +TK+ T
Sbjct: 1048 DYRDYNTHTKVHFIIQLDEKHMKVALTEGLEEKFKLTKTIATTNLVAFDPEGRITKYATV 1107
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ ILKEF+ VRL+YY +RK + L + KL+NQARF+ DG L I +KK +IA
Sbjct: 1108 DDILKEFFVVRLKYYERRKQFQLADLQRDLEKLSNQARFVQMIIDGKLVISKKKKPVLIA 1167
Query: 339 EL 340
EL
Sbjct: 1168 EL 1169
>gi|70992793|ref|XP_751245.1| DNA topoisomerase II [Aspergillus fumigatus Af293]
gi|66848878|gb|EAL89207.1| DNA topoisomerase II [Aspergillus fumigatus Af293]
gi|159130301|gb|EDP55414.1| DNA topoisomerase II [Aspergillus fumigatus A1163]
Length = 1660
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 124/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF +++RH F D++ I +AFSKK DERK WL R
Sbjct: 645 GLGTSTTEDAQVYFRDLDRHLKEFHTLQDHETELIELAFSKKKADERKEWL--------R 696
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ K ITYT+F+NKELILFS DN+RSIPS+ DGLKPG RKVL+TC
Sbjct: 697 QFKPGTFLDHSVDK----ITYTDFINKELILFSMADNQRSIPSVVDGLKPGQRKVLYTCF 752
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN R+++KV +LAG V+ +AY HG+ SL TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 753 RRNLRKDMKVVELAGHVSGMTAYQHGDASLQQTIVGLAQTFVGSNNINCLEPSGNFGSRL 812
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 83/131 (63%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V FV+ M L A +GL + FKL T+A +++ AFD G +TK+ +
Sbjct: 972 DYKDYNTHTKVHFVIQMDEKNLQSAREEGLEEKFKLSKTIATTNLVAFDPEGRITKYASV 1031
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ ILKEFYAVRL++Y +RK Y L E KLTNQARF+ DGDL I +KK ++A
Sbjct: 1032 DDILKEFYAVRLKFYERRKQYQLNELQKELDKLTNQARFVQMIIDGDLVISKKKKPALVA 1091
Query: 339 ELIKRKYDSDP 349
EL K + + P
Sbjct: 1092 ELKKHGFKAFP 1102
>gi|388584015|gb|EIM24316.1| DNA topoisomerase II [Wallemia sebi CBS 633.66]
Length = 1322
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 119/178 (66%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ +EA++YF ++RHRI F + + D I MAF+KK ++RK WL
Sbjct: 627 GLGTSSDEEARQYFKALDRHRIPFSATQEGDRELIDMAFNKKRTEDRKEWLR-------- 678
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G + + ++Y +F+NKELILFS DN RSIPS+ DG KPG RK+L+ +
Sbjct: 679 ----GYNPRTFLDQDIEELSYKDFINKELILFSMADNARSIPSMVDGFKPGQRKILYGTI 734
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + E+KVAQL SVAE++AYHHGE L TI+ +AQNFVGSNN+N+L P GQFG+
Sbjct: 735 KRNLKNEIKVAQLGMSVAENTAYHHGETILFQTIVGMAQNFVGSNNLNILSPNGQFGS 792
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 85/131 (64%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+E+ T TTV+F+VT+ +++ A GLH+ FKL +++A S++ F+ G + K+
Sbjct: 956 DYEEHDTTTTVEFIVTLEKNQMKTALSKGLHEYFKLNSSIATSNIVCFNSDGKIKKYTAP 1015
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL+EF+ +RL+YY RKDY LG +++NQARFI D +L I NRK+K+++
Sbjct: 1016 EEILEEFFYIRLKYYQLRKDYQMHELGIAFDRISNQARFIKMIIDRELIISNRKRKDIVD 1075
Query: 339 ELIKRKYDSDP 349
EL +K+ P
Sbjct: 1076 ELRAKKFTPYP 1086
>gi|388854922|emb|CCF51425.1| probable DNA topoisomerase II [Ustilago hordei]
Length = 1503
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 118/181 (65%), Gaps = 12/181 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS S++AK+YF M++H + F + D D I +AF+KK D+RK WL R
Sbjct: 696 GLGTSDSQDAKKYFRAMDKHMLPFDTTKDGDRELIDLAFNKKKADDRKEWL--------R 747
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ G D+ K I Y +F+NKELILFS DN RSIPS DGLKPG RKV+F
Sbjct: 748 QFRPGTYLDHNIDK----IPYADFINKELILFSMADNMRSIPSAVDGLKPGQRKVIFGTF 803
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
R E+KVAQL G V+ +AYHHGEQSL TI+ LAQNFVGSNN+NLL+P GQFGT L
Sbjct: 804 NRKGDGEIKVAQLVGHVSGTTAYHHGEQSLTMTIVGLAQNFVGSNNVNLLEPRGQFGTRL 863
Query: 191 F 191
Sbjct: 864 L 864
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 78/131 (59%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHT++TV F+V ++ + G+ FK + ++ ++M FD+ G + K+ +
Sbjct: 1024 DYKEYHTESTVHFIVELNAKGQAEIAEKGVEAFFKTSSQISTTNMVLFDQDGKIKKYSSP 1083
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL+ FY +RL YY KRK++L L +L+NQARF+ L + NRK+ +++A
Sbjct: 1084 EEILENFYLLRLSYYQKRKEHLVDQLKLMYDRLSNQARFVQMIISRQLIVSNRKRADIVA 1143
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1144 ELRQKDFRPFP 1154
>gi|22830795|dbj|BAC15613.1| DNA topoisomerase II [Aspergillus ochraceus]
Length = 1101
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 591 GLGTSTTEDAQVYFRDLDRHLKEFHTMQDGEAGLIELAFSKKKADERKEWL--------R 642
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ K ITYT+F+NKELILFS DN+RSIPS+ DGLKPG RKVL TC
Sbjct: 643 QYKPGTYLDHSVAK----ITYTDFINKELILFSMADNQRSIPSVVDGLKPGQRKVLHTCF 698
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN ++++KV +LAG V+ +AYHHG+ SL TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 699 RRNLKKDMKVVELAGHVSGMTAYHHGDVSLQQTIVGLAQTFVGSNNINCLEPSGNFGSRL 758
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 79/127 (62%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY++Y+T T V F++ + + A +GL + FKL ++A +++ AFD G +TK+ T
Sbjct: 918 DYRDYNTHTKVHFIIQLDEKHMKVALTEGLEEKFKLTKSIATTNLVAFDPEGRITKYATV 977
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ ILKEFY VRL+YY +RK + L E KL+NQARF+ DG L I +KK +I
Sbjct: 978 DDILKEFYVVRLKYYERRKQFQLNDLQRELEKLSNQARFVQMIIDGKLVISKKKKPVLIT 1037
Query: 339 ELIKRKY 345
EL ++ +
Sbjct: 1038 ELKEKGF 1044
>gi|18369812|dbj|BAB84101.1| DNA topoisomerase II [Aspergillus fumigatus]
Length = 1495
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 124/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF +++RH F D++ I +AFSKK DERK WL R
Sbjct: 645 GLGTSTTEDAQVYFRDLDRHLKEFHTLQDHETELIELAFSKKKADERKEWL--------R 696
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ K ITYT+F+NKELILFS DN+RSIPS+ DGLKPG RKVL+TC
Sbjct: 697 QFKPGTFLDHSVDK----ITYTDFINKELILFSMADNQRSIPSVVDGLKPGQRKVLYTCF 752
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN R+++KV +LAG V+ +AY HG+ SL TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 753 RRNLRKDMKVVELAGHVSGMTAYQHGDASLQQTIVGLAQTFVGSNNINCLEPSGNFGSRL 812
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 83/131 (63%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V FV+ M L A +GL + FKL T+A +++ AFD G +TK+ +
Sbjct: 972 DYKDYNTHTKVHFVIQMDEKNLQSAREEGLEEKFKLSKTIATTNLVAFDPEGRITKYASV 1031
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ ILKEFYAVRL++Y +RK Y L E KLTNQARF+ DGDL I +KK ++A
Sbjct: 1032 DDILKEFYAVRLKFYERRKQYQLNELQKELDKLTNQARFVQMIIDGDLVISKKKKPALVA 1091
Query: 339 ELIKRKYDSDP 349
EL K + + P
Sbjct: 1092 ELKKHGFKAFP 1102
>gi|294950051|ref|XP_002786436.1| DNA topoisomerase 2-alpha, putative [Perkinsus marinus ATCC 50983]
gi|239900728|gb|EER18232.1| DNA topoisomerase 2-alpha, putative [Perkinsus marinus ATCC 50983]
Length = 1579
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 119/178 (66%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEA++YFS + +H + F Y +D I MAF+KK D+RK W+ + +
Sbjct: 620 GLGTSTSKEAQQYFSQISKHSLSFDYRDGDDGEAIDMAFNKKRADDRKEWINGYAD---- 675
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G+ ++K + + Y +F+NKEL+ FS D RSIPS+ DG KP RKVLF L
Sbjct: 676 ------GDCVDHSKAS--LRYLDFINKELVQFSKYDVMRSIPSMVDGFKPSQRKVLFCAL 727
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + + KVAQ G V+EHSAYHHGEQSL S I+ +AQ+F GSNN+NLL P GQFGT
Sbjct: 728 KRNLKSDTKVAQFVGYVSEHSAYHHGEQSLESCIVGMAQDFTGSNNLNLLFPSGQFGT 785
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 223 YHTDTTVKFVVTMSPDKLHKAEMD--GLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQ 280
YHT+ +V F T+ ++ K+ +D GL K FKL++ + ++M FDR G + ++D+
Sbjct: 945 YHTEHSVHFKCTLQ-NEAAKSVVDSLGLEKAFKLRSAFSTTNMVLFDRDGKIRRYDSVLD 1003
Query: 281 ILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAEL 340
I+K+F +RL+ Y KRKD L L E L L+N+ RF++ +G++ + +K +++ EL
Sbjct: 1004 IIKDFADLRLDMYVKRKDSLIAKLTKEILILSNKCRFVMMVINGEIVFQKKKIVQLMEEL 1063
Query: 341 IKRKY 345
++K+
Sbjct: 1064 KRKKF 1068
>gi|281208664|gb|EFA82840.1| DNA topoisomerase II [Polysphondylium pallidum PN500]
Length = 1524
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 120/180 (66%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST +EAKEYFS + H+I F+Y DDA I AF+KK ++RKTW+ +
Sbjct: 726 GLGTSTEEEAKEYFSQLVNHKIDFEYDNGADDA-IDKAFNKKRANDRKTWMDQYTPGA-- 782
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
YL K + T+F++KELILFS D ERSIPS+ DG K RK+LF+C
Sbjct: 783 ---------YLDQYGIKKVKITDFIDKELILFSIADCERSIPSIVDGFKTSQRKILFSCF 833
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN ++E+KVAQL G V+E SAYHHG+QSL S II LAQ +VG+NNIN+L P G FG+ L
Sbjct: 834 KRNLKKEIKVAQLIGYVSEQSAYHHGDQSLASAIIGLAQTYVGANNINVLYPGGGFGSRL 893
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 69/103 (66%), Gaps = 1/103 (0%)
Query: 244 EMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGV 303
E+D ++K FKL+ LA ++M FD G + +F+TT I+K F+ +RLEYY KRKDYL
Sbjct: 1116 EID-VNKTFKLEKKLAETNMTVFDEEGRIKQFETTTDIIKYFFKIRLEYYQKRKDYLCDK 1174
Query: 304 LGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKYD 346
L E +L+N+ARFI+ + +L I N K+ +++ +L + K+D
Sbjct: 1175 LEEEHRRLSNKARFILAVVNKELVIANVKRLDLVKKLKEMKFD 1217
>gi|119473123|ref|XP_001258508.1| DNA topoisomerase II [Neosartorya fischeri NRRL 181]
gi|119406660|gb|EAW16611.1| DNA topoisomerase II [Neosartorya fischeri NRRL 181]
Length = 1735
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 125/180 (69%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF +++RH F D++ I +AFSKK DERK WL R
Sbjct: 717 GLGTSTTEDAQVYFRDLDRHLKEFHTMQDHETELIELAFSKKKADERKEWL--------R 768
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ + + ITYT+F+NKELILFS DN+RSIPS+ DGLKPG RKVL+TC
Sbjct: 769 QFKPGTFLDH----SVEKITYTDFINKELILFSMADNQRSIPSVVDGLKPGQRKVLYTCF 824
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN ++++KV +LAG V+ +AY HG+ SL TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 825 RRNLKKDMKVVELAGHVSGMTAYQHGDASLQQTIVGLAQTFVGSNNINCLEPSGNFGSRL 884
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 83/131 (63%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V FV+ M + A +GL + FKL T+A +++ AFD G +TK+ +
Sbjct: 1044 DYKDYNTHTKVHFVIQMDEKNIKSAVAEGLEEKFKLSKTIATTNLVAFDPEGRITKYASV 1103
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ ILKEFYAVRL++Y +RK Y L E KLTNQARF+ DGDL I +KK ++A
Sbjct: 1104 DDILKEFYAVRLKFYERRKQYQLSELQKELDKLTNQARFVQMIIDGDLVISKKKKPVLVA 1163
Query: 339 ELIKRKYDSDP 349
EL K + + P
Sbjct: 1164 ELKKHGFKAFP 1174
>gi|18369816|dbj|BAB84103.1| DNA topoisomerase II [Penicillium chrysogenum]
Length = 1423
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 597 GLGTSTTEDAQVYFRDLDRHLKEFHTMQDGEAGLIELAFSKKKADERKEWL--------R 648
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ K ITYT+F+NKELILFS DN+RSIPS+ DGLKPG RKVL TC
Sbjct: 649 QFKPGTFLDHSGAK----ITYTDFINKELILFSMADNQRSIPSVVDGLKPGQRKVLHTCF 704
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN ++++KV +LAG V+ +AYHHG+ SL TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 705 RRNLKKDMKVVELAGHVSGMTAYHHGDVSLQQTIVGLAQTFVGSNNINCLEPSGNFGSRL 764
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 78/122 (63%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY++Y+T T V F++ + + A +GL + FKL T+A +++ AFD G +TK+ T
Sbjct: 924 DYRDYNTHTKVHFIIQLDEKHMKVALTEGLEEKFKLTKTIATTNLVAFDPEGRITKYATV 983
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ ILKEF+ VRL+YY +RK + L + KL+NQARF+ DG L I +K+ ++IA
Sbjct: 984 DDILKEFFVVRLKYYERRKQFQLADLQRDLEKLSNQARFVQMIIDGKLVISKKKRPDLIA 1043
Query: 339 EL 340
EL
Sbjct: 1044 EL 1045
>gi|341896211|gb|EGT52146.1| hypothetical protein CAEBREN_13599 [Caenorhabditis brenneri]
Length = 1168
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 122/178 (68%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS EA+EYFS+++ H + FKY+G DD IRM F ++ DERK W+ R
Sbjct: 634 GLGTSTSNEAREYFSDLDHHTVNFKYTGPEDDEAIRMVFDREKTDERKEWI--------R 685
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E + ED T+ I+Y EFV+ +L+ F +D +RSIPSL DGLKP RK+L+T L
Sbjct: 686 KSENSLEEDTDKTE----ISYEEFVDGQLMQFGMVDLKRSIPSLIDGLKPSQRKILWTLL 741
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
++ E+KV+QLAG+VA +YHHGE SL+ TII + Q F G++N+ LLQPIGQFGT
Sbjct: 742 NMDESTEMKVSQLAGAVAHRQSYHHGEDSLVRTIIRMGQTFCGASNLPLLQPIGQFGT 799
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 75/138 (54%), Gaps = 6/138 (4%)
Query: 219 DYKEYHTDTTVKFVVTMSPDK----LHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTK 274
++ E HT+ V F +T+ K L K+ D L+ FKLQT++ + FD+ G L +
Sbjct: 965 EFSEKHTEKRVHFRLTIDRKKASRFLQKSNSDLLN-YFKLQTSIT-ENRVLFDKNGKLRE 1022
Query: 275 FDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKK 334
F++ ++I KEF+ VR E Y +R + A+ + NQ +FI +G + + ++
Sbjct: 1023 FESISEIAKEFFEVRSELYERRLQIQKEECAAKLKYVENQMKFIDLVTNGTIELRAMERD 1082
Query: 335 EMIAELIKRKYDSDPVKS 352
E+ A+L + ++ DP+ S
Sbjct: 1083 ELEAKLEEYGFEIDPLAS 1100
>gi|398409176|ref|XP_003856053.1| hypothetical protein MYCGRDRAFT_98287 [Zymoseptoria tritici IPO323]
gi|339475938|gb|EGP91029.1| hypothetical protein MYCGRDRAFT_98287 [Zymoseptoria tritici IPO323]
Length = 1677
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 123/180 (68%), Gaps = 11/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +++A+ YFS++++H F + + I +AFSKK D RKTWL ++
Sbjct: 711 GLGTSDTRDAQIYFSDLDKHLKTFHTMQEGEPELIDLAFSKKKADARKTWLGNFVPGT-- 768
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
YL +T+ ITY +F+NKELILFS DN RSIPS+ DGLKPG RKV++TC
Sbjct: 769 ---------YLDMSSTEDITYDDFINKELILFSMADNMRSIPSVVDGLKPGQRKVMYTCF 819
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN +++VKV +LAGSV+ +AY +GE SL TI+ LAQ FVGSNNIN+L+P G FG+ L
Sbjct: 820 RRNLKKDVKVVELAGSVSGLTAYSYGETSLQQTIVGLAQTFVGSNNINILEPSGNFGSRL 879
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY EY+T V F++ M K+ + E + L ++FKL T+A S++ AFD G + K+ T
Sbjct: 1042 DYTEYNTPEDVHFIIKMEEKKMQENE-EKLEELFKLSRTMATSNLVAFDPQGRIHKYATP 1100
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDG 324
I++EFY VRL Y KRK Y+ + E KLTNQARFI DG
Sbjct: 1101 LDIMEEFYHVRLRMYHKRKAYMLSEMQRELEKLTNQARFIKMIIDG 1146
>gi|403218545|emb|CCK73035.1| hypothetical protein KNAG_0M01820 [Kazachstania naganishii CBS
8797]
Length = 1432
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 117/178 (65%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+S+E +EYFS++++H F ND I +AFSKK D+RK WL R
Sbjct: 604 GLGTSSSQEVREYFSDLDKHLKTFHQLQGNDKDLIELAFSKKKADDRKEWL--------R 655
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D I ++F+NKELILFS DN RSIPS+ DG KPG RKVLF
Sbjct: 656 QYEPGTVLD----PKISDIPISDFINKELILFSLADNIRSIPSVLDGFKPGQRKVLFATF 711
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN R E+KVAQLA SVA+ +AYHH E+SL TII +AQNFVGSNNI LL P G FGT
Sbjct: 712 KRNLRSEIKVAQLAPSVAQFTAYHHAEESLAQTIIGMAQNFVGSNNIYLLMPNGAFGT 769
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 80/122 (65%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E HT+ ++F+VT++P+++ K G ++ FKL + +++ +M AFD G + K+D
Sbjct: 932 DMEEQHTNN-IRFIVTLTPEEMTKTRKIGFYERFKLISPISLQNMVAFDPRGKIRKYDNV 990
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
N+IL EFY VRLEYY KRKDY+ L E K + Q +FI + +L++ N+ +KE+I
Sbjct: 991 NEILSEFYYVRLEYYQKRKDYMSERLQWEVEKYSFQVKFIKMIIENELKVTNKPRKEIIK 1050
Query: 339 EL 340
EL
Sbjct: 1051 EL 1052
>gi|134077492|emb|CAK96636.1| unnamed protein product [Aspergillus niger]
Length = 1712
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 124/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF +++RH F DN+ I +AFSKK DERK WL R
Sbjct: 728 GLGTSTTEDAQVYFRDLDRHLKEFHTMQDNEAELIELAFSKKKADERKEWL--------R 779
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ + + ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+TC
Sbjct: 780 QFKPGTFLDH----SVEKITYTDFINKELILFSMADNVRSIPSVVDGLKPGQRKVLYTCF 835
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN ++++KV +LAG V+ +AY HG+ SL TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 836 RRNLKKDMKVVELAGHVSGMTAYQHGDISLQQTIVGLAQTFVGSNNINCLEPSGNFGSRL 895
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 81/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V FV+ M L A +GL + FKL T+A +++ AFD G +TK+ T
Sbjct: 1055 DYKDYNTHTKVHFVIQMDEKHLKSAVEEGLEEKFKLTKTIATTNLVAFDPEGRITKYATV 1114
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ ILKEF+AVRL+YY +RK Y + E KL+NQARF+ DG+L + +KK ++
Sbjct: 1115 DDILKEFFAVRLKYYERRKQYQLNEMQKELEKLSNQARFVQMIIDGELVVSKKKKNVLVV 1174
Query: 339 ELIKRKYDSDP 349
EL + + P
Sbjct: 1175 ELKDKGFKPFP 1185
>gi|322707413|gb|EFY98991.1| DNA topoisomerase 2 [Metarhizium anisopliae ARSEF 23]
Length = 1647
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 122/180 (67%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF+N++ H F+ + + FSKK D RK WL ++
Sbjct: 721 GLGTSSNEDAQVYFTNLDNHLKEFEVMKSEEAELFDLVFSKKKADARKEWLGNFIP---- 776
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G D+ +TK ITYT+FV+KELILFS DN RSIPS+ DGLKPG RKVL+ C
Sbjct: 777 ----GTFLDH----STKEITYTDFVSKELILFSMADNLRSIPSVIDGLKPGQRKVLYACF 828
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN ++ KV +LAG V+EH+AYHHGE SL TII LAQNFVGSNNIN+L+P G FG+ L
Sbjct: 829 KRNLIKDKKVVELAGYVSEHTAYHHGEASLQQTIIGLAQNFVGSNNINILEPSGNFGSRL 888
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 76/138 (55%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE++ TV F + + L K +GL + FKL +A S++ AFD G + K++
Sbjct: 1058 DYKEFNDHKTVHFEIMVDEKHLPKILEEGLLERFKLTKQVATSNLVAFDTRGQIRKYEKV 1117
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+E+Y RL+ Y RK Y V + KL NQ RFI E DG+L + +KK +++
Sbjct: 1118 EDILEEYYVHRLQMYHDRKQYWLQVYDNDLEKLKNQYRFIKEIIDGELIVGRKKKAVLVS 1177
Query: 339 ELIKRKYDSDPVKSWKMK 356
EL RKY + P K K
Sbjct: 1178 ELRDRKYKAFPPGGQKQK 1195
>gi|429962922|gb|ELA42466.1| hypothetical protein VICG_00565 [Vittaforma corneae ATCC 50505]
Length = 656
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 118/170 (69%), Gaps = 12/170 (7%)
Query: 21 KEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRRRKEMGIGEDY 80
K+YFS++ +H F + D I +AF+KK DERK+WL + + Y
Sbjct: 3 KQYFSDLPKHVKSFSPISEPDRELIDLAFNKKKADERKSWLGDF-----------VPGTY 51
Query: 81 LYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKV 140
L ++ I+ ++F+NKELILFS DN RSIPS+ DGLKPG RKVLF+C KRN + E+KV
Sbjct: 52 L-DQSASNISISDFINKELILFSVADNTRSIPSIMDGLKPGQRKVLFSCFKRNLKSEIKV 110
Query: 141 AQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
AQL G V+E SAYHHGEQSL +TI+N+AQ+FVGSNNINLL PIG FG+ L
Sbjct: 111 AQLVGYVSEQSAYHHGEQSLCATIVNMAQDFVGSNNINLLLPIGSFGSRL 160
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 70/128 (54%), Gaps = 11/128 (8%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHT+ V F+VT K + K+ TTL S+M FD G + K++T
Sbjct: 316 DYKEYHTEKKVNFLVT----SFKKFPL-------KISTTLTTSNMVCFDSEGKIKKYETP 364
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I+KEFY RL +Y RK+Y + E KL N+ARFI E +G L I NR ++
Sbjct: 365 LEIIKEFYYTRLRFYTTRKEYRLKAIKEELNKLENKARFIREVINGRLVINNRPTDSIVR 424
Query: 339 ELIKRKYD 346
+L K+D
Sbjct: 425 DLESMKFD 432
>gi|350629974|gb|EHA18347.1| DNA topoisomerase II [Aspergillus niger ATCC 1015]
Length = 1639
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 124/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF +++RH F DN+ I +AFSKK DERK WL R
Sbjct: 655 GLGTSTTEDAQVYFRDLDRHLKEFHTMQDNEAELIELAFSKKKADERKEWL--------R 706
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ + + ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+TC
Sbjct: 707 QFKPGTFLDH----SVEKITYTDFINKELILFSMADNVRSIPSVVDGLKPGQRKVLYTCF 762
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN ++++KV +LAG V+ +AY HG+ SL TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 763 RRNLKKDMKVVELAGHVSGMTAYQHGDISLQQTIVGLAQTFVGSNNINCLEPSGNFGSRL 822
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 81/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V FV+ M L A +GL + FKL T+A +++ AFD G +TK+ T
Sbjct: 982 DYKDYNTHTKVHFVIQMDEKHLKSAVEEGLEEKFKLTKTIATTNLVAFDPEGRITKYATV 1041
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ ILKEF+AVRL+YY +RK Y + E KL+NQARF+ DG+L + +KK ++
Sbjct: 1042 DDILKEFFAVRLKYYERRKQYQLNEMQKELEKLSNQARFVQMIIDGELVVSKKKKNVLVV 1101
Query: 339 ELIKRKYDSDP 349
EL + + P
Sbjct: 1102 ELKDKGFKPFP 1112
>gi|317030635|ref|XP_001392968.2| DNA topoisomerase 2 [Aspergillus niger CBS 513.88]
Length = 1707
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 124/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF +++RH F DN+ I +AFSKK DERK WL R
Sbjct: 723 GLGTSTTEDAQVYFRDLDRHLKEFHTMQDNEAELIELAFSKKKADERKEWL--------R 774
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ + + ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+TC
Sbjct: 775 QFKPGTFLDH----SVEKITYTDFINKELILFSMADNVRSIPSVVDGLKPGQRKVLYTCF 830
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN ++++KV +LAG V+ +AY HG+ SL TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 831 RRNLKKDMKVVELAGHVSGMTAYQHGDISLQQTIVGLAQTFVGSNNINCLEPSGNFGSRL 890
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 81/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V FV+ M L A +GL + FKL T+A +++ AFD G +TK+ T
Sbjct: 1050 DYKDYNTHTKVHFVIQMDEKHLKSAVEEGLEEKFKLTKTIATTNLVAFDPEGRITKYATV 1109
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ ILKEF+AVRL+YY +RK Y + E KL+NQARF+ DG+L + +KK ++
Sbjct: 1110 DDILKEFFAVRLKYYERRKQYQLNEMQKELEKLSNQARFVQMIIDGELVVSKKKKNVLVV 1169
Query: 339 ELIKRKYDSDP 349
EL + + P
Sbjct: 1170 ELKDKGFKPFP 1180
>gi|18369814|dbj|BAB84102.1| DNA topoisomerase II [Aspergillus niger]
Length = 1391
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 124/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF +++RH F DN+ I +AFSKK DERK WL R
Sbjct: 650 GLGTSTTEDAQVYFRDLDRHLKEFHTMQDNEAELIELAFSKKKADERKEWL--------R 701
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ + + ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+TC
Sbjct: 702 QFKPGTFLDH----SVEKITYTDFINKELILFSMADNVRSIPSVVDGLKPGQRKVLYTCF 757
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN ++++KV +LAG V+ +AY HG+ SL TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 758 RRNLKKDMKVVELAGHVSGMTAYQHGDVSLQQTIVGLAQTFVGSNNINCLEPSGNFGSRL 817
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 81/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V FV+ M L A +GL + FKL T+A +++ AFD G +TK+ T
Sbjct: 977 DYKDYNTHTKVHFVIQMDEKHLKSAVEEGLEEKFKLTKTIATTNLVAFDPEGRITKYATV 1036
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ ILKEF+AVRL+YY +RK Y + E KL+NQARF+ DG+L + +KK ++
Sbjct: 1037 DDILKEFFAVRLKYYERRKQYQLNEMQKELEKLSNQARFVQMIIDGELVVSKKKKNVLVV 1096
Query: 339 ELIKRKYDSDP 349
EL + + P
Sbjct: 1097 ELKDKGFKPFP 1107
>gi|115390190|ref|XP_001212600.1| DNA topoisomerase 2 [Aspergillus terreus NIH2624]
gi|114194996|gb|EAU36696.1| DNA topoisomerase 2 [Aspergillus terreus NIH2624]
Length = 1732
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 122/180 (67%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF +++RH F DN+ I +AFSKK DERK WL R
Sbjct: 721 GLGTSTTEDAQIYFRDLDRHLKEFHTMQDNEVELIELAFSKKKADERKEWL--------R 772
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ G D+ K ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+TC
Sbjct: 773 QFRPGTFLDHSVDK----ITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTCF 828
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN ++++KV +LAG V+ +AY HGE SL TI+ LAQ FVGSNN+N L+P G FG+ L
Sbjct: 829 RRNLKKDMKVVELAGHVSGTTAYQHGEGSLQQTIVGLAQTFVGSNNVNCLEPSGNFGSRL 888
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V FV+ M + A +GL + FKL T+ +++ AFD G +TK+ +
Sbjct: 1048 DYKDYNTHTKVHFVIQMDEKHMKTAIAEGLEEKFKLSKTMTTTNLVAFDPEGRITKYASV 1107
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I+KEFYAVRL+YY +RK Y + E KL+NQARF+ DG L I +KK ++A
Sbjct: 1108 EDIMKEFYAVRLKYYERRKQYQLNEMQKELDKLSNQARFVQMIIDGKLVISKKKKAVLVA 1167
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1168 ELKEKDFKPFP 1178
>gi|261188733|ref|XP_002620780.1| DNA topoisomerase 2 [Ajellomyces dermatitidis SLH14081]
gi|239592012|gb|EEQ74593.1| DNA topoisomerase 2 [Ajellomyces dermatitidis SLH14081]
Length = 1758
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/180 (53%), Positives = 124/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+ +A+ YF +++RH F D++ I +AFSKK DERK WL R
Sbjct: 721 GLGTSTTDDAEIYFRDLDRHLKQFHVMRDHEAELIDLAFSKKKADERKEWL--------R 772
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ TT+ ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+TC
Sbjct: 773 QFKPGTFLDH----TTEEITYTDFINKELILFSMADNIRSIPSVIDGLKPGQRKVLYTCF 828
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
K N ++++KVA+L+G V +AY HG+ SL TII LAQNFVGSNNIN L+P G FG+ L
Sbjct: 829 KLNVKKDMKVAELSGYVLGLTAYQHGDASLQQTIIGLAQNFVGSNNINCLEPSGNFGSRL 888
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 77/127 (60%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V FV+ + K +GL + KL TLA S++ AFD G +TK+++
Sbjct: 1048 DYKDYNTHTKVHFVIQLDEKHAKKTIAEGLEEKLKLTKTLATSNLVAFDSEGRITKYESP 1107
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+EFY+VR++ Y KRK + + + KL+NQARF+ DG L I + K +++
Sbjct: 1108 EHILQEFYSVRIKLYEKRKQHQLSQMQKDLEKLSNQARFVQMIIDGKLVISKKPKAQLVQ 1167
Query: 339 ELIKRKY 345
EL ++ +
Sbjct: 1168 ELKEKGF 1174
>gi|397644699|gb|EJK76510.1| hypothetical protein THAOC_01723 [Thalassiosira oceanica]
Length = 771
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 120/181 (66%), Gaps = 10/181 (5%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST EAKEYF + +H F++ +ND I MAF K D+RK W+ +E
Sbjct: 227 GLGTSTPAEAKEYFLSFIQHYRPFRWE-ENDGESIDMAFEKTRADDRKEWILNVYDE--- 282
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + + E ++TY FV+ ELI FSN +N R++PS+ DGLKP RK+L C
Sbjct: 283 KSTINVDE------IDGSVTYGNFVDNELIHFSNANNIRALPSVIDGLKPSQRKILHACF 336
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN + E+KVAQLAG AEH+AYHHGE SL +TI ++AQNFVGSNNINLL PIGQFGT L
Sbjct: 337 KRNLKDEIKVAQLAGYCAEHTAYHHGEASLHATITSMAQNFVGSNNINLLLPIGQFGTRL 396
Query: 191 F 191
Sbjct: 397 M 397
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 52/103 (50%)
Query: 216 ESNDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKF 275
E + E HT T+V F V +S KL + GLH FKL+ L+ +M AF + F
Sbjct: 534 EIRSFTENHTTTSVSFDVKVSTSKLARFIKGGLHSKFKLRNKLSKRNMNAFCPNMDIKLF 593
Query: 276 DTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFI 318
+T I F+ VRL Y RK LE + A + N+ARFI
Sbjct: 594 ETPEDIADAFFRVRLALYVDRKSVLESNMEHAAALMRNKARFI 636
>gi|327349241|gb|EGE78098.1| DNA topoisomerase 2 [Ajellomyces dermatitidis ATCC 18188]
Length = 1804
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/180 (53%), Positives = 124/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+ +A+ YF +++RH F D++ I +AFSKK DERK WL R
Sbjct: 721 GLGTSTTDDAEIYFRDLDRHLKQFHVMRDHEAELIDLAFSKKKADERKEWL--------R 772
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ TT+ ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+TC
Sbjct: 773 QFKPGTFLDH----TTEEITYTDFINKELILFSMADNIRSIPSVIDGLKPGQRKVLYTCF 828
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
K N ++++KVA+L+G V +AY HG+ SL TII LAQNFVGSNNIN L+P G FG+ L
Sbjct: 829 KLNVKKDMKVAELSGYVLGLTAYQHGDASLQQTIIGLAQNFVGSNNINCLEPSGNFGSRL 888
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 78/127 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V FV+ + KA +GL + KL TLA S++ AFD G +TK+++
Sbjct: 1048 DYKDYNTHTKVHFVIQLDEKHAKKAIAEGLEEKLKLTKTLATSNLVAFDSEGRITKYESP 1107
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+EFY+VR++ Y KRK + + + KL+NQARF+ DG L I + K +++
Sbjct: 1108 EHILQEFYSVRIKLYEKRKQHQLSQMQKDLEKLSNQARFVQMIIDGKLVISKKPKAQLVQ 1167
Query: 339 ELIKRKY 345
EL ++ +
Sbjct: 1168 ELKEKGF 1174
>gi|429856265|gb|ELA31187.1| DNA topoisomerase 2 [Colletotrichum gloeosporioides Nara gc5]
Length = 1781
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 121/180 (67%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF+N++ H F ++ +AFSKK D RK WL ++
Sbjct: 722 GLGTSSNEDAQVYFTNLDDHLKEFNTMKPDEAELFELAFSKKKADARKEWLGNFVPGT-- 779
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
YL +TK+ITYT+FVNKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 780 ---------YL-DHSTKSITYTDFVNKELILFSMADNMRSIPSVVDGLKPGQRKVMYACF 829
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN ++ KV +LAG V+E ++YHHGE SL TII LAQNFVGSNNIN L+P G FG+ L
Sbjct: 830 KRNLTKDQKVIELAGYVSEQTSYHHGEVSLQQTIIGLAQNFVGSNNINCLEPSGNFGSRL 889
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 80/132 (60%), Gaps = 2/132 (1%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEM-DGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
DYKE++ V FV+ M DK K M DGL + FKL +A S++ AFD G + K++
Sbjct: 1058 DYKEFNDHKNVHFVIQMD-DKHTKDVMSDGLMERFKLTKQVATSNLVAFDTNGQIRKYEK 1116
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
IL+EFY RL+ YA+RK + GV A+ KL+ QARFI E DG L I +KK ++
Sbjct: 1117 VEDILEEFYHYRLDMYAERKKHWLGVYHADFRKLSEQARFIREIIDGKLVIAKKKKAVLV 1176
Query: 338 AELIKRKYDSDP 349
EL KRKY+ P
Sbjct: 1177 EELAKRKYEPFP 1188
>gi|238507856|ref|XP_002385129.1| DNA topoisomerase II [Aspergillus flavus NRRL3357]
gi|220688648|gb|EED45000.1| DNA topoisomerase II [Aspergillus flavus NRRL3357]
Length = 1717
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 125/180 (69%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF +++RH F DN+ I +AFSKK DERK WL R
Sbjct: 708 GLGTSTTEDAQVYFRDLDRHLKEFHTMQDNEVGLIELAFSKKKADERKEWL--------R 759
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +K I+YT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+TC
Sbjct: 760 QFKPGTFLDHSVSK----ISYTDFINKELILFSMADNVRSIPSVVDGLKPGQRKVLYTCF 815
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN ++++KV +LAG V+ +AY HG+ SL TI+ LAQ+FVGSNN+N L+P G FG+ L
Sbjct: 816 RRNLKKDMKVVELAGHVSGMTAYQHGDISLQQTIVGLAQSFVGSNNVNCLEPSGNFGSRL 875
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 76/131 (58%), Gaps = 6/131 (4%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T + + A +GL + FKL T+A +++ AFD G +TK+ T
Sbjct: 1035 DYKDYNTHTK------LDEKNMKSALSEGLEEKFKLSKTVATTNLVAFDPEGRITKYATV 1088
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ ILKEFY RL++Y KRK Y L E KL+NQARF+ E DG L + +KK ++
Sbjct: 1089 DDILKEFYTYRLKFYEKRKQYQLSQLQKELDKLSNQARFVQEIIDGKLVVSKKKKNVLVQ 1148
Query: 339 ELIKRKYDSDP 349
EL + Y + P
Sbjct: 1149 ELKDKGYKAFP 1159
>gi|325191142|emb|CCA25924.1| DNA topoisomerase putative [Albugo laibachii Nc14]
Length = 1141
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 118/184 (64%), Gaps = 19/184 (10%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEE--- 67
GLGTSTS EA+EYFSN+ +H I K+ + D + M FSK +RK WL +
Sbjct: 586 GLGTSTSAEAREYFSNLNKHLIQMKWQSEEDGQLLEMVFSKSRACDRKNWLLQNYDSSSF 645
Query: 68 -CRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVL 126
CR++ +Y +FVN+ELI FS+ DN RSIPS DGLK RKVL
Sbjct: 646 LCRKQG---------------VFSYKDFVNQELIQFSHADNTRSIPSAIDGLKTSQRKVL 690
Query: 127 FTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQF 186
F CLKR +E+KVAQLAG +EH+AYHHGE SL STI+N+AQ++VGSNNI LL P GQF
Sbjct: 691 FACLKRKLFQEMKVAQLAGYCSEHTAYHHGEASLHSTIVNMAQDYVGSNNITLLYPSGQF 750
Query: 187 GTFL 190
GT L
Sbjct: 751 GTRL 754
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 6/149 (4%)
Query: 220 YKEYHTDTTVKFVVTMS-PDKLHKAEMDGLHKV--FKLQTTLAISSMCAFDRYGVLTKFD 276
+ E+H++ V F + +S D +M + V FKL++ L ++M AFD L +F
Sbjct: 918 FTEHHSEEHVCFRIQLSRADSTFFLDMSPIELVRFFKLESKLNTNNMHAFDPNYTLQRFS 977
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLR-IENRK--K 333
+++ ++K F VRL+ Y +RK+YL + L+L N+ RFI + GDL+ I RK K
Sbjct: 978 SSDDVIKAFLPVRLDLYNRRKEYLVKKQQCDVLELQNRVRFIAQVSAGDLQCILTRKMTK 1037
Query: 334 KEMIAELIKRKYDSDPVKSWKMKQNKENA 362
++ A L + Y + + K +N
Sbjct: 1038 HQVAAVLDSQGYTPEQEFRYDEKSTNDNP 1066
>gi|342884609|gb|EGU84816.1| hypothetical protein FOXB_04711 [Fusarium oxysporum Fo5176]
Length = 1666
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 122/186 (65%), Gaps = 12/186 (6%)
Query: 5 HDVMIAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTW 64
H GLGTS++++A+ YF+N++ H F + + +AFSKK D RK WL +
Sbjct: 708 HSKYFKGLGTSSNEDAQVYFTNLDDHLKEFDTMKPEEADLLELAFSKKKADARKEWLGNF 767
Query: 65 MEECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRK 124
+ YL +TK+ITY++F+N+ELILFS DN RSIPS+ DG KPG RK
Sbjct: 768 VPGT-----------YL-DHSTKSITYSDFINRELILFSMADNMRSIPSVLDGFKPGQRK 815
Query: 125 VLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIG 184
V++ C KRN ++ KV +LAG V+E +AYHHGEQSL TII LAQNFVGSNNIN L+P G
Sbjct: 816 VIYACFKRNLVKDKKVVELAGYVSEQTAYHHGEQSLQQTIIGLAQNFVGSNNINCLEPSG 875
Query: 185 QFGTFL 190
FG+ L
Sbjct: 876 NFGSRL 881
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 78/138 (56%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE++ +TV F + + + K +G+ + FKL +A S++ AFD G++ K++
Sbjct: 1051 DYKEFNDHSTVHFEIAVDDKHMGKVLEEGVLERFKLTKQVATSNLVAFDTRGMIRKYEKV 1110
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+EFY RL+ Y RK + GV A+ KL NQARFI E DG L + +KK ++
Sbjct: 1111 EDILEEFYLYRLDMYTDRKKHWLGVFHADYRKLKNQARFIKEIIDGQLVVGKKKKTVLVQ 1170
Query: 339 ELIKRKYDSDPVKSWKMK 356
EL Y++ P K K
Sbjct: 1171 ELRDCDYEAFPPGGEKKK 1188
>gi|224007445|ref|XP_002292682.1| DNA topoisomerase [Thalassiosira pseudonana CCMP1335]
gi|220971544|gb|EED89878.1| DNA topoisomerase [Thalassiosira pseudonana CCMP1335]
Length = 1230
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 119/179 (66%), Gaps = 11/179 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS EAKEYFSN++ H IL + + I MAFSK V+ERK WL R
Sbjct: 630 GLGTSTSSEAKEYFSNLDIHEILDNDAITSGAGLIDMAFSKSKVEERKKWLN------RV 683
Query: 71 RKEMGIGEDYLYTKTTK-AITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
K+ + Y+ + + Y+EF+N+EL+LFS DN RSIP + DG KP RKVL+ C
Sbjct: 684 EKDTFLN----YSAAQRNGVNYSEFINRELVLFSQYDNVRSIPHIMDGFKPSQRKVLYAC 739
Query: 130 LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+ + E+KVAQLAG + EHSAYHHG+ SL TII +AQ++ GSNN+NLL P GQFGT
Sbjct: 740 FKKKLKAEIKVAQLAGYIGEHSAYHHGDMSLNGTIIGMAQSYCGSNNLNLLYPSGQFGT 798
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 88/148 (59%), Gaps = 2/148 (1%)
Query: 216 ESNDYKEYHTDTTVKFVVTMSPDKLHKAEMD--GLHKVFKLQTTLAISSMCAFDRYGVLT 273
E +D+KE HTDTTV F VT S D + K E + GL FKL TT++ +M FD G +
Sbjct: 961 EISDFKENHTDTTVSFTVTASKDAIDKFEKEKGGLVGKFKLSTTISTKNMTLFDTNGKIH 1020
Query: 274 KFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKK 333
K+ + IL+ F+ RLEYY KRKD L + E N+ARF+ E C GDL + NRK+
Sbjct: 1021 KYKASVDILRTFFHHRLEYYVKRKDMLLEKMRRELKVYDNKARFVEEVCKGDLVVSNRKR 1080
Query: 334 KEMIAELIKRKYDSDPVKSWKMKQNKEN 361
E++A+L R YD P + K + +E+
Sbjct: 1081 AELLADLQLRGYDLYPREVKKSETEEED 1108
>gi|391864315|gb|EIT73611.1| DNA topoisomerase type II [Aspergillus oryzae 3.042]
Length = 1730
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 125/180 (69%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF +++RH F DN+ I +AFSKK DERK WL R
Sbjct: 715 GLGTSTTEDAQVYFRDLDRHLKEFHTMQDNEVGLIELAFSKKKADERKEWL--------R 766
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +K I+YT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+TC
Sbjct: 767 QFKPGTFLDHSVSK----ISYTDFINKELILFSMADNVRSIPSVVDGLKPGQRKVLYTCF 822
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN ++++KV +LAG V+ +AY HG+ SL TI+ LAQ+FVGSNN+N L+P G FG+ L
Sbjct: 823 RRNLKKDMKVVELAGHVSGMTAYQHGDISLQQTIVGLAQSFVGSNNVNCLEPSGNFGSRL 882
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V FV+ + + A +GL + FKL T+A +++ AFD G +TK+ T
Sbjct: 1042 DYKDYNTHTKVHFVIQLDEKNMKSALSEGLEEKFKLSKTVATTNLVAFDPEGRITKYATV 1101
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ ILKEFY RL++Y KRK Y L E KL+NQARF+ E DG L + +KK ++
Sbjct: 1102 DDILKEFYTYRLKFYEKRKQYQLSQLQKELDKLSNQARFVQEIIDGKLVVSKKKKNVLVQ 1161
Query: 339 ELIKRKYDSDP 349
EL + Y + P
Sbjct: 1162 ELKDKGYKAFP 1172
>gi|410945801|pdb|4GFH|F Chain F, Topoisomerase Ii-Dna-Amppnp Complex
Length = 1099
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 118/175 (67%), Gaps = 12/175 (6%)
Query: 14 TSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRRRKE 73
TS ++E +EYFSN++RH +F ND +I +AFSKK D+RK WL R+ E
Sbjct: 564 TSLAQEVREYFSNLDRHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWL--------RQYE 615
Query: 74 MGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRN 133
G D T K I ++F+NKELILFS DN RSIP++ DG KPG RKVL+ C K+N
Sbjct: 616 PGTVLD----PTLKEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCFKKN 671
Query: 134 DRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+ E+KVAQLA V+E +AYHHGEQSL TII LAQNFVGSNNI LL P G FGT
Sbjct: 672 LKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIYLLLPNGAFGT 726
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H D +KF++T+SP+++ K G ++ FKL + +++ +M AFD +G + K+++
Sbjct: 890 DMEEQHDDN-IKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSV 948
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
N+IL EFY VRLEYY KRKD++ L E K + Q +FI + +L + N+ + +I
Sbjct: 949 NEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQ 1008
Query: 339 EL 340
EL
Sbjct: 1009 EL 1010
>gi|239610333|gb|EEQ87320.1| DNA topoisomerase 2 [Ajellomyces dermatitidis ER-3]
Length = 1804
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/180 (53%), Positives = 124/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+ +A+ YF +++RH F D++ I +AFSKK DERK WL R
Sbjct: 721 GLGTSTTDDAEIYFRDLDRHLKQFHVMRDHEAELIDLAFSKKKADERKEWL--------R 772
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ TT+ ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+TC
Sbjct: 773 QFKPGTFLDH----TTEEITYTDFINKELILFSMADNIRSIPSVIDGLKPGQRKVLYTCF 828
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
K N ++++KVA+L+G V +AY HG+ SL TII LAQNFVGSNNIN L+P G FG+ L
Sbjct: 829 KLNVKKDMKVAELSGYVLGLTAYQHGDASLQQTIIGLAQNFVGSNNINCLEPSGNFGSRL 888
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 78/127 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V FV+ + KA +GL + KL TLA S++ AFD G +TK+++
Sbjct: 1048 DYKDYNTHTKVHFVIQLDEKHAKKAIAEGLEEKLKLTKTLATSNLVAFDSEGRITKYESP 1107
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+EFY+VR++ Y KRK + + + KL+NQARF+ DG L I + K +++
Sbjct: 1108 EHILQEFYSVRIKLYEKRKQHQLSQMQKDLEKLSNQARFVQMIIDGKLVISKKPKAQLVQ 1167
Query: 339 ELIKRKY 345
EL ++ +
Sbjct: 1168 ELKEKGF 1174
>gi|410945796|pdb|4GFH|A Chain A, Topoisomerase Ii-Dna-Amppnp Complex
Length = 1103
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 118/175 (67%), Gaps = 12/175 (6%)
Query: 14 TSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRRRKE 73
TS ++E +EYFSN++RH +F ND +I +AFSKK D+RK WL R+ E
Sbjct: 568 TSLAQEVREYFSNLDRHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWL--------RQYE 619
Query: 74 MGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRN 133
G D T K I ++F+NKELILFS DN RSIP++ DG KPG RKVL+ C K+N
Sbjct: 620 PGTVLD----PTLKEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCFKKN 675
Query: 134 DRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+ E+KVAQLA V+E +AYHHGEQSL TII LAQNFVGSNNI LL P G FGT
Sbjct: 676 LKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIYLLLPNGAFGT 730
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H D +KF++T+SP+++ K G ++ FKL + +++ +M AFD +G + K+++
Sbjct: 894 DMEEQHDDN-IKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSV 952
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
N+IL EFY VRLEYY KRKD++ L E K + Q +FI + +L + N+ + +I
Sbjct: 953 NEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQ 1012
Query: 339 EL 340
EL
Sbjct: 1013 EL 1014
>gi|327309598|ref|XP_003239490.1| DNA topoisomerase II [Trichophyton rubrum CBS 118892]
gi|326459746|gb|EGD85199.1| DNA topoisomerase II [Trichophyton rubrum CBS 118892]
Length = 1674
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 719 GLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAFSKKKADERKEWL--------R 770
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +T ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 771 QFKPGTYLDH----STDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTMF 826
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN RR++KV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 827 KRNVRRDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRL 886
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V FV+ M + KA +GL + FKL +A S+M AFD G +T+++T
Sbjct: 1045 DYKDYNTHTNVHFVIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETP 1104
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ FYAVR++ Y KRK YL L + KL+NQARF+ DG L I +KK +I
Sbjct: 1105 EDILRAFYAVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKAVLIQ 1164
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1165 ELQEKGFKPFP 1175
>gi|322695778|gb|EFY87581.1| DNA topoisomerase 2 [Metarhizium acridum CQMa 102]
Length = 1653
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 122/180 (67%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF+N++ H F+ + + FSKK D RK WL ++
Sbjct: 730 GLGTSSNEDAQVYFTNLDNHLKEFETMKSEEAELFDLVFSKKKADARKEWLGNYIP---- 785
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G D+ +TK ITYT+FV+KELILFS DN RSIPS+ DGLKPG RKVL+ C
Sbjct: 786 ----GTFLDH----STKEITYTDFVSKELILFSMADNLRSIPSVIDGLKPGQRKVLYACF 837
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN ++ KV +LAG V+EH+AYHHGE SL TII LAQ+FVGSNNIN+L+P G FG+ L
Sbjct: 838 KRNLTKDKKVVELAGYVSEHTAYHHGEASLQQTIIGLAQDFVGSNNINVLEPSGNFGSRL 897
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 76/138 (55%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE++ TV F + + L K +GL + FKL +A S++ AFD G + K++
Sbjct: 1067 DYKEFNDHKTVHFEIMVDEKHLPKILEEGLLERFKLTKQIATSNLVAFDTRGQIRKYEKV 1126
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+E+Y RL+ Y RK Y V + KL NQ RFI E DG+L + +KK +++
Sbjct: 1127 EDILEEYYVHRLQMYHARKQYWLQVYDNDLEKLKNQYRFIKEIIDGELIVGRKKKAVLVS 1186
Query: 339 ELIKRKYDSDPVKSWKMK 356
EL RKY + P K K
Sbjct: 1187 ELRDRKYRAFPPGGQKQK 1204
>gi|358366486|dbj|GAA83107.1| DNA topoisomerase II [Aspergillus kawachii IFO 4308]
Length = 1695
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 124/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF +++RH F DN+ I +AFSKK DERK WL R
Sbjct: 708 GLGTSTTEDAQVYFRDLDRHLKEFHTMQDNEAELIELAFSKKKADERKEWL--------R 759
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ + + I+YT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+TC
Sbjct: 760 QFKPGTFLDH----SVEKISYTDFINKELILFSMADNVRSIPSVVDGLKPGQRKVLYTCF 815
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN ++++KV +LAG V+ +AY HG+ SL TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 816 RRNLKKDMKVVELAGHVSGMTAYQHGDVSLQQTIVGLAQTFVGSNNINCLEPSGNFGSRL 875
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 81/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V FV+ M L A +GL FKL T+A +++ AFD G +TK+ T
Sbjct: 1035 DYKDYNTHTKVHFVIQMDEKHLKSAVEEGLEDKFKLTKTIATTNLVAFDPEGRITKYATV 1094
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ ILKEF+AVRL++Y +RK Y + E KL+NQARF+ DG+L + +KK ++
Sbjct: 1095 DDILKEFFAVRLKFYERRKQYQLNEMQKELEKLSNQARFVQMIIDGELVVSKKKKSVLVV 1154
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1155 ELKEKGFKPFP 1165
>gi|83775666|dbj|BAE65786.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1437
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 125/180 (69%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF +++RH F DN+ I +AFSKK DERK WL R
Sbjct: 607 GLGTSTTEDAQVYFRDLDRHLKEFHTMQDNEVGLIELAFSKKKADERKEWL--------R 658
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +K I+YT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+TC
Sbjct: 659 QFKPGTFLDHSVSK----ISYTDFINKELILFSMADNVRSIPSVVDGLKPGQRKVLYTCF 714
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN ++++KV +LAG V+ +AY HG+ SL TI+ LAQ+FVGSNN+N L+P G FG+ L
Sbjct: 715 RRNLKKDMKVVELAGHVSGMTAYQHGDISLQQTIVGLAQSFVGSNNVNCLEPSGNFGSRL 774
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V FV+ + + A +GL + FKL T+A +++ AFD G +TK+ T
Sbjct: 934 DYKDYNTHTKVHFVIQLDEKNMKSALSEGLEEKFKLSKTVATTNLVAFDPEGRITKYATV 993
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ ILKEFY RL++Y KRK Y L E KL+NQARF+ E DG L + +KK ++
Sbjct: 994 DDILKEFYTYRLKFYEKRKQYQLSQLQKELDKLSNQARFVQEIIDGKLVVSKKKKNVLVQ 1053
Query: 339 ELIKRKYDSDP 349
EL + Y + P
Sbjct: 1054 ELKDKGYKAFP 1064
>gi|18369810|dbj|BAB84100.1| DNA topoisomerase II [Aspergillus flavus]
Length = 1219
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 125/180 (69%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF +++RH F DN+ I +AFSKK DERK WL R
Sbjct: 613 GLGTSTTEDAQVYFRDLDRHLKEFHTMQDNEVGLIELAFSKKKADERKEWL--------R 664
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +K I+YT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+TC
Sbjct: 665 QFKPGTFLDHSVSK----ISYTDFINKELILFSMADNVRSIPSVVDGLKPGQRKVLYTCF 720
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN ++++KV +LAG V+ +AY HG+ SL TI+ LAQ+FVGSNN+N L+P G FG+ L
Sbjct: 721 RRNLKKDMKVVELAGHVSGMTAYQHGDISLQQTIVGLAQSFVGSNNVNCLEPSGNFGSRL 780
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V FV+ + + A +GL + FKL T+A +++ AFD G +TK+ T
Sbjct: 940 DYKDYNTHTKVHFVIQLDEKNMKSALSEGLEEKFKLSKTVATTNLVAFDPEGRITKYATV 999
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ ILKEFY RL++Y KRK Y L E KL+NQARF+ E DG L + +KK ++
Sbjct: 1000 DDILKEFYTYRLKFYEKRKQYQLSQLQKELDKLSNQARFVQEIIDGKLVVSKKKKNVLVQ 1059
Query: 339 ELIKRKYDSDP 349
EL + Y + P
Sbjct: 1060 ELKDKGYKAFP 1070
>gi|10281012|dbj|BAB13747.1| type II DNA topoisomerase [Kluyveromyces marxianus]
Length = 777
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 118/178 (66%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST +EA+EYFS ++ H F +D I +AFSKK D+RK WL +
Sbjct: 564 GLGTSTQQEAREYFSQLDLHLKKFHALQGDDCQLIDLAFSKKKADDRKEWLKLY------ 617
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D T+ I ++F+NKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 618 --EPGTVLDPKLTE----IPISDFINKELILFSLADNIRSIPSVLDGLKPGQRKVIYACF 671
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + E+KVAQL G V+EH+ YHHGE SL TI+ LAQ+FVGSNNI LL+P G FGT
Sbjct: 672 KRNLKSEIKVAQLGGYVSEHTGYHHGEPSLYQTIVGLAQDFVGSNNIYLLKPNGAFGT 729
>gi|448123839|ref|XP_004204766.1| Piso0_000036 [Millerozyma farinosa CBS 7064]
gi|358249399|emb|CCE72465.1| Piso0_000036 [Millerozyma farinosa CBS 7064]
Length = 1409
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 121/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST E +EYF+ ++RH F +D + I +AFSKK D+RK WL +
Sbjct: 648 GLGTSTLMEGREYFAALDRHLKKFHALQGDDKSSIDLAFSKKKADDRKEWLQCF------ 701
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D L + I ++F+NKELILFS DN RSIPS+ DGLKPG RKVL+ C
Sbjct: 702 --EPGTHLDPLL----QEIPISDFINKELILFSMADNIRSIPSVLDGLKPGQRKVLYACF 755
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+RN ++KV+QLAG V+E++ YHHGE SL+ TII LAQ+F+GSNN+N+L+PIG FG+
Sbjct: 756 RRNLTVDIKVSQLAGYVSENTGYHHGEASLVQTIIGLAQDFIGSNNLNVLKPIGTFGS 813
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 75/119 (63%)
Query: 222 EYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQI 281
E H +KF++ +S +++ K+ GL + FKL + + +S+M FD G + K+++ QI
Sbjct: 977 EEHHGMNIKFIIKLSEEEMAKSHKIGLLERFKLISVINLSNMVLFDPSGRIKKYESPLQI 1036
Query: 282 LKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAEL 340
L+EF+ VRLEYY +RKD+L L + LKL+ QARFI D + + N+K+ ++ +L
Sbjct: 1037 LREFFYVRLEYYQRRKDFLTDKLQNQLLKLSEQARFIKHIIDNKISLSNKKRSVLVKQL 1095
>gi|224007473|ref|XP_002292696.1| topoisomerase [Thalassiosira pseudonana CCMP1335]
gi|220971558|gb|EED89892.1| topoisomerase [Thalassiosira pseudonana CCMP1335]
Length = 1172
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/182 (52%), Positives = 118/182 (64%), Gaps = 13/182 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGD----NDDAHIRMAFSKKLVDERKTWLTTWME 66
GLGTSTS EAKEYFSN++ H I+F D A I MAFSK V+ERK WL
Sbjct: 598 GLGTSTSSEAKEYFSNLDIHEIIFNEISDCIPSTGSALIDMAFSKSKVEERKKWLN---- 653
Query: 67 ECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVL 126
R E +Y + + ++EFVN+EL+LFS DN RSIP + DG KP RKVL
Sbjct: 654 ----RVEKDTFLNYRDAQRN-GVNHSEFVNRELVLFSQYDNVRSIPHIMDGFKPSQRKVL 708
Query: 127 FTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQF 186
+ C K+ + E+KVAQLAG + EHSAYHHG+ SL TII +AQ++ GSNN+NLL P GQF
Sbjct: 709 YACFKKKLKAEIKVAQLAGYIGEHSAYHHGDMSLNGTIIGMAQSYCGSNNLNLLYPSGQF 768
Query: 187 GT 188
GT
Sbjct: 769 GT 770
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
Query: 216 ESNDYKEYHTDTTVKFVVTMSPDKLHKAEMD--GLHKVFKLQTTLAISSMCAFDRYGVLT 273
E +D+KE HTDTTV F VT + + ++K E GL K FKL TT++ ++M F G +
Sbjct: 933 EISDFKENHTDTTVSFTVTATEENINKFEYGKGGLLKKFKLSTTMSTANMHLFSEDGKIV 992
Query: 274 KFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKK 333
K++ + IL+ F+ RLEYY KRKD L L E N+ARF+ E GDL + NRK+
Sbjct: 993 KYNGSVDILRTFFHHRLEYYVKRKDMLLEKLRRELKVYDNKARFVEEVYKGDLVVSNRKR 1052
Query: 334 KEMIAELIKRKYDSDPVKSWKMKQNKEN 361
E++ EL ++YD P +S + + + E+
Sbjct: 1053 SELLFELRDKEYDIYPKESNQAETDDED 1080
>gi|255718235|ref|XP_002555398.1| KLTH0G08338p [Lachancea thermotolerans]
gi|238936782|emb|CAR24961.1| KLTH0G08338p [Lachancea thermotolerans CBS 6340]
Length = 1436
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/208 (48%), Positives = 129/208 (62%), Gaps = 23/208 (11%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ +EA+EYFS+++ H F D I +AFSKK D+RK WL R
Sbjct: 601 GLGTSSLQEAREYFSDLDTHLKKFHALEGEDSQLIDLAFSKKKADDRKEWL--------R 652
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D T I +F+NKELILFS DN RSIPS+ DG KPG RKVL++C
Sbjct: 653 QYEPGNTLD----PTLSEIPICDFINKELILFSLADNVRSIPSVLDGFKPGQRKVLYSCF 708
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR + E+KVAQL G V+EH++YHHGEQSL TI+ +AQ++VGSNNI LL+P G FGT
Sbjct: 709 KRKLKSEIKVAQLIGYVSEHTSYHHGEQSLAQTIVGMAQDYVGSNNIYLLKPNGAFGTRA 768
Query: 191 ----------FIF-ESTNLSGAVVNALD 207
+IF E N++ + N LD
Sbjct: 769 AGGKDSAAPRYIFTELNNITPNIFNPLD 796
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H T+KF V ++ +++ G ++ FKL +T+++++M AFD G + K++
Sbjct: 929 DMQENHG-ATIKFTVELTDEEMQNTRRIGFYERFKLVSTISLANMVAFDPNGRIKKYEDV 987
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL +FY VRLEY+ KRKD++ L + KL+ Q RFI + L + N+ + +
Sbjct: 988 RDILSDFYYVRLEYFQKRKDHMSERLQWQVEKLSQQTRFIKLIVEKKLTVTNKPRSALFR 1047
Query: 339 EL 340
EL
Sbjct: 1048 EL 1049
>gi|19112597|ref|NP_595805.1| DNA topoisomerase II [Schizosaccharomyces pombe 972h-]
gi|12644105|sp|P08096.2|TOP2_SCHPO RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
II
gi|3393015|emb|CAA20107.1| DNA topoisomerase II [Schizosaccharomyces pombe]
Length = 1485
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 114/178 (64%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS + K YFS+++RH F + D I MAF+KK D RK WL T+
Sbjct: 657 GLGTSDHDDMKSYFSDLDRHMKYFHAMQEKDAELIEMAFAKKKADVRKEWLRTYRP---- 712
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
GI DY T I +F+N+ELI FS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 713 ----GIYMDY----TQPQIPIDDFINRELIQFSMADNIRSIPSVVDGLKPGQRKVVYYCF 764
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN E KV++LAG VA +AYHHGE S+ TI+NLAQNFVGSNNINLL P GQFGT
Sbjct: 765 KRNLVHETKVSRLAGYVASETAYHHGEVSMEQTIVNLAQNFVGSNNINLLMPNGQFGT 822
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 84/147 (57%), Gaps = 2/147 (1%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+ +H + V F VT++ + +A + L FKL T A S+M AFD G + K+D+
Sbjct: 985 DYESHHGEGNVHFNVTLTEAGMKEALNESLEVKFKLSRTQATSNMIAFDASGRIKKYDSV 1044
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL EFY VRL Y +RK+++ L + +NQARFI +G+L + +KKK++I
Sbjct: 1045 EDILTEFYEVRLRTYQRRKEHMVNELEKRFDRFSNQARFIHMIIEGELVVSKKKKKDLIV 1104
Query: 339 ELIKRKYD--SDPVKSWKMKQNKENAL 363
EL ++K+ S P K + ENAL
Sbjct: 1105 ELKEKKFQPISKPKKGHLVDLEVENAL 1131
>gi|5121|emb|CAA27857.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 1431
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 114/178 (64%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS + K YFS+++RH F + D I MAF+KK D RK WL T+
Sbjct: 603 GLGTSDHDDMKSYFSDLDRHMKYFHAMQEKDAELIEMAFAKKKADVRKEWLRTYRP---- 658
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
GI DY T I +F+N+ELI FS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 659 ----GIYMDY----TQPQIPIDDFINRELIQFSMADNIRSIPSVVDGLKPGQRKVVYYCF 710
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN E KV++LAG VA +AYHHGE S+ TI+NLAQNFVGSNNINLL P GQFGT
Sbjct: 711 KRNLVHETKVSRLAGYVASETAYHHGEVSMEQTIVNLAQNFVGSNNINLLMPNGQFGT 768
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 84/147 (57%), Gaps = 2/147 (1%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+ +H + V F VT++ + +A + L FKL T A S+M AFD G + K+D+
Sbjct: 931 DYESHHGEGIVHFNVTLTEAGMKEALNESLEVKFKLSRTQATSNMIAFDASGRIKKYDSV 990
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL EFY VRL Y +RK+++ L + +NQARFI +G+L + +KKK++I
Sbjct: 991 EDILTEFYEVRLRTYQRRKEHMVNELEKRFDRFSNQARFIHMIIEGELVVSKKKKKDLIV 1050
Query: 339 ELIKRKYD--SDPVKSWKMKQNKENAL 363
EL ++K+ S P K + ENAL
Sbjct: 1051 ELKEKKFQPISKPKKGHLVDLEVENAL 1077
>gi|25006385|dbj|BAC24012.1| DNA topoisomerase II [Trichophyton violaceum]
Length = 1094
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 590 GLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAFSKKKADERKEWL--------R 641
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +T ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 642 QFKPGTYLDH----STDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTMF 697
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN RR++KV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 698 KRNVRRDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRL 757
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V FV+ M + KA +GL + FKL +A S+M AFD G +T+++T
Sbjct: 916 DYKDYNTHTNVHFVIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETP 975
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ FYAVR++ Y KRK YL L + KL+NQARF+ DG L I +KK +I
Sbjct: 976 EDILRAFYAVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKAVLIQ 1035
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1036 ELQEKGFKPFP 1046
>gi|326473740|gb|EGD97749.1| DNA topoisomerase II [Trichophyton tonsurans CBS 112818]
Length = 1678
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 719 GLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAFSKKKADERKEWL--------R 770
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +T ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 771 QFKPGTYLDH----STDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTMF 826
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R++VKV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 827 KRNVRKDVKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRL 886
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ M + KA +GL + FKL +A S+M AFD G +T+++T
Sbjct: 1045 DYKDYNTHTDVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETP 1104
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ FYAVR++ Y KRK YL L + KL+NQARF+ DG L I +KK +I
Sbjct: 1105 EDILRAFYAVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKAVLIQ 1164
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1165 ELQEKGFKPFP 1175
>gi|308483878|ref|XP_003104140.1| hypothetical protein CRE_01053 [Caenorhabditis remanei]
gi|308258448|gb|EFP02401.1| hypothetical protein CRE_01053 [Caenorhabditis remanei]
Length = 1165
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 122/178 (68%), Gaps = 11/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS EAKEYFS+++ H I FKY+G NDD IRMAF ++ DERK W+ R
Sbjct: 629 GLGTSTSIEAKEYFSDLDHHVINFKYTGLNDDKAIRMAFDREKSDERKEWI-------RG 681
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
K + + L ++Y EF++ +L+ F +D +RSIPSL DGLKP RK+L+T L
Sbjct: 682 SKRL----ESLVDDGKTELSYKEFIDGQLMQFGMVDLKRSIPSLIDGLKPSQRKILWTLL 737
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
++ E+KV+QLAG+VA +YHHGE+SL+ TII + Q F GS+N+ LLQPIGQFGT
Sbjct: 738 NMDESTEMKVSQLAGAVAHRQSYHHGEESLVRTIIRMGQTFCGSSNLPLLQPIGQFGT 795
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 72/138 (52%), Gaps = 6/138 (4%)
Query: 219 DYKEYHTDTTVKFVVTMSPDK----LHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTK 274
++ E HT+ V F +T+ K L K + L+ FKL++++ + FD+ G+L +
Sbjct: 961 EFSERHTEKRVNFRLTVDRKKAGRFLQKTNSELLN-FFKLRSSIT-ENRVLFDKNGLLKE 1018
Query: 275 FDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKK 334
+ + ++I EF+ VR + Y KR + A+ + NQ +FI +G + + + +
Sbjct: 1019 YKSISEIASEFFDVRRDLYEKRLKAQKDECEAKLKYVDNQIKFIDLVTNGTIDLRSMGRD 1078
Query: 335 EMIAELIKRKYDSDPVKS 352
++ + L + +SDP+ S
Sbjct: 1079 QLESSLEEYGLESDPLSS 1096
>gi|25006381|dbj|BAC24010.1| DNA topoisomerase II [Trichophyton rubrum]
Length = 1097
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 591 GLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAFSKKKADERKEWL--------R 642
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +T ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 643 QFKPGTYLDH----STDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTMF 698
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN RR++KV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 699 KRNVRRDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRL 758
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V FV+ M + KA +GL + FKL +A S+M AFD G +T+++T
Sbjct: 917 DYKDYNTHTNVHFVIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETP 976
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ FYAVR++ Y KRK YL L + KL+NQARF+ DG L I +KK +I
Sbjct: 977 EDILRAFYAVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKAVLIQ 1036
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1037 ELQEKGFKPFP 1047
>gi|326482946|gb|EGE06956.1| DNA topoisomerase II [Trichophyton equinum CBS 127.97]
Length = 1678
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 719 GLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAFSKKKADERKEWL--------R 770
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +T ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 771 QFKPGTYLDH----STDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTMF 826
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R++VKV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 827 KRNVRKDVKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRL 886
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ M + KA +GL + FKL +A S+M AFD G +T+++T
Sbjct: 1045 DYKDYNTHTDVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETP 1104
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ FYAVR++ Y KRK YL L + KL+NQARF+ DG L I +KK +I
Sbjct: 1105 EDILRAFYAVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKAVLIQ 1164
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1165 ELQEKGFKPFP 1175
>gi|4218208|emb|CAA09753.1| DNA topoisomerase (ATP-hydrolysing) [Homo sapiens]
Length = 717
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 108/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 67 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 126
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 127 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 186
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L++R Y+SDPVK+WK Q K
Sbjct: 187 QMLVQRGYESDPVKAWKEAQEK 208
>gi|449017495|dbj|BAM80897.1| DNA topoisomerase II [Cyanidioschyzon merolae strain 10D]
Length = 1200
Score = 180 bits (457), Expect = 8e-43, Method: Composition-based stats.
Identities = 93/183 (50%), Positives = 118/183 (64%), Gaps = 6/183 (3%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS E K YF ++ERHRI F D + +AF++ +ERK WL E
Sbjct: 652 GLGTSTSAEGKAYFRDLERHRIRFAPVAPGDRHQLDLAFNRSRAEERKRWLA----ELDT 707
Query: 71 RKEMGIGEDYLYTKTTK--AITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
G+ L T + ++ FVN+EL L+S +N RSIPS DGLKP RKVL+
Sbjct: 708 ATPRDAGDAPLETNASSDAGVSLATFVNRELALYSYANNVRSIPSAIDGLKPAQRKVLYA 767
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
CLKR R++KVAQLAG VAE +AYHHGE+SL STI+ +AQ+F G+NN+ LLQP+GQFGT
Sbjct: 768 CLKRGLVRDMKVAQLAGYVAEQTAYHHGEESLHSTIVRMAQDFCGANNLPLLQPLGQFGT 827
Query: 189 FLF 191
L
Sbjct: 828 RLL 830
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEM--DGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
++EYHTD + F + M+ + E +GL + +L++T++ ++M FD G + K++T
Sbjct: 986 FREYHTDENICFELVMTRANAQRLEERGEGLWRHLRLESTISCTNMHLFDARGRIRKYET 1045
Query: 278 TNQILKEFYAVRLEYYAKR 296
IL++F R Y KR
Sbjct: 1046 PLSILEDFMIERERLYQKR 1064
>gi|425768541|gb|EKV07062.1| DNA topoisomerase 2 [Penicillium digitatum PHI26]
gi|425775683|gb|EKV13939.1| DNA topoisomerase 2 [Penicillium digitatum Pd1]
Length = 1758
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 121/180 (67%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 719 GLGTSTTEDAQVYFRDLDRHLKEFHTMQDGEAGLIELAFSKKKADERKEWL--------R 770
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ K ITYT+F+NKELILFS DN+RSIPS+ DGLKPG RKVL TC
Sbjct: 771 QYKPGTYLDHSVAK----ITYTDFINKELILFSMADNQRSIPSVVDGLKPGQRKVLHTCF 826
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
RN ++++KV +LAG V+ +AY HG+ SL TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 827 IRNLKKDMKVVELAGHVSGMTAYQHGDVSLQQTIVGLAQTFVGSNNINCLEPSGNFGSRL 886
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 79/127 (62%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY++Y+T T V F++ + + A +GL + FKL ++A +++ AFD G +TK+ T
Sbjct: 1046 DYRDYNTHTKVHFIIQLDEKHMKAALSEGLEEKFKLTKSIATTNLVAFDPEGRITKYATV 1105
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ ILKEFY VRL+YY +RK + L E KL+NQARF+ DG L I +KK +I
Sbjct: 1106 DDILKEFYVVRLKYYERRKQFQLSNLQRELEKLSNQARFVQMIIDGKLVISKKKKPVLIT 1165
Query: 339 ELIKRKY 345
EL ++ +
Sbjct: 1166 ELKEKGF 1172
>gi|302500519|ref|XP_003012253.1| hypothetical protein ARB_01513 [Arthroderma benhamiae CBS 112371]
gi|291175810|gb|EFE31613.1| hypothetical protein ARB_01513 [Arthroderma benhamiae CBS 112371]
Length = 1680
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 719 GLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAFSKKKADERKEWL--------R 770
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +T ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 771 QFKPGTYLDH----STDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTMF 826
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R+++KV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 827 KRNVRKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRL 886
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ M + KA +GL + FKL +A S+M AFD G +T+++T
Sbjct: 1045 DYKDYNTHTNVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETP 1104
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ FYAVR++ Y KRK YL L + KL+NQARF+ DG L I +KK +I
Sbjct: 1105 EDILRAFYAVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKAVLIQ 1164
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1165 ELQEKGFKPFP 1175
>gi|302659966|ref|XP_003021668.1| hypothetical protein TRV_04248 [Trichophyton verrucosum HKI 0517]
gi|291185576|gb|EFE41050.1| hypothetical protein TRV_04248 [Trichophyton verrucosum HKI 0517]
Length = 1680
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 719 GLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAFSKKKADERKEWL--------R 770
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +T ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 771 QFKPGTYLDH----STDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTMF 826
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R+++KV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 827 KRNVRKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRL 886
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 81/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ M + KA +GL + FKL +A S+M AFD G +T+++T
Sbjct: 1045 DYKDYNTHTNVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETP 1104
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ FYAVR++ Y KRK YL L + KL+NQARF+ DG+L I +KK +I
Sbjct: 1105 EDILRAFYAVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGELVISKKKKAVLIQ 1164
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1165 ELQEKGFKPFP 1175
>gi|367000283|ref|XP_003684877.1| hypothetical protein TPHA_0C02900 [Tetrapisispora phaffii CBS 4417]
gi|357523174|emb|CCE62443.1| hypothetical protein TPHA_0C02900 [Tetrapisispora phaffii CBS 4417]
Length = 1422
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 119/178 (66%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ +E +EYF++++ H F ND I +AFSKK D+RK WL R
Sbjct: 606 GLGTSSGQEVREYFADLDTHLKKFHALEGNDKDLIELAFSKKKADDRKEWL--------R 657
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D T K I ++F+NKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 658 LYEPGTVLD----PTLKEIPISDFINKELILFSLADNIRSIPSVLDGLKPGQRKVMYGCF 713
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN E+KVAQLA V+E +AYHHGEQSL TII+LAQNFVG++NI LL+P G FGT
Sbjct: 714 KRNLVSEIKVAQLAPYVSECTAYHHGEQSLAQTIISLAQNFVGASNIYLLKPNGAFGT 771
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 80/122 (65%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H+D +KF++ ++P+++ K G + FKL +++++++M AFD +G + K++T
Sbjct: 934 DMEEQHSDA-IKFIIKLTPEEMSKTRKIGFYDRFKLVSSISLNNMVAFDPHGKIKKYETP 992
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL+EFY VRLEYY KRKDY+ L K++ Q +FI D +L + N+ KK +I
Sbjct: 993 QEILQEFYYVRLEYYQKRKDYMCERLQWVLEKISYQVKFIKMIIDRELIVTNKPKKLVIK 1052
Query: 339 EL 340
EL
Sbjct: 1053 EL 1054
>gi|111305596|gb|AAI21351.1| LOC779457 protein [Xenopus (Silurana) tropicalis]
Length = 757
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 83/122 (68%), Positives = 101/122 (82%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M+RHRI+F+Y+G DDA I +AFSKK VD+RK WLT +ME+ R+
Sbjct: 633 GLGTSTSKEAKEYFADMDRHRIIFRYAGPEDDAAITLAFSKKKVDDRKEWLTNFMEDRRQ 692
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL DGLKPG RKVLFTC
Sbjct: 693 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCF 752
Query: 131 KR 132
K+
Sbjct: 753 KK 754
>gi|302422958|ref|XP_003009309.1| DNA topoisomerase [Verticillium albo-atrum VaMs.102]
gi|261352455|gb|EEY14883.1| DNA topoisomerase [Verticillium albo-atrum VaMs.102]
Length = 1688
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 120/180 (66%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF+N++ H F ++ +AFSKK D RK WL ++
Sbjct: 666 GLGTSSNEDAQVYFTNLDDHLKEFDTMQSSEADLFDLAFSKKKADARKEWLGNFVPGT-- 723
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
YL +TK+ITY +FVN+ELILFS DN RSIPS+ DGLKPG RKV+F C
Sbjct: 724 ---------YL-DHSTKSITYDDFVNRELILFSMADNMRSIPSVLDGLKPGQRKVMFACF 773
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN ++ KV +LAG V+E +AYHHGE SL TII LAQNFVGSNN+N L+P G FG+ L
Sbjct: 774 KRNLTKDQKVVELAGYVSEKAAYHHGEMSLQQTIIGLAQNFVGSNNVNCLEPSGNFGSRL 833
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 80/135 (59%), Gaps = 6/135 (4%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEM----DGLHKVFKLQTTLAISSMCAFDRYGVLTK 274
DYKE++ V FV+ + D+ H ++ +G+ FKL +A S++ AFD G + K
Sbjct: 1002 DYKEFNDHKNVNFVIQL--DEKHYKDIHKTHEGIMDRFKLNKQVATSNLVAFDSTGRIRK 1059
Query: 275 FDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKK 334
++ IL+EFY RL+ Y+ RK + GV ++ KL NQARFI E DG+L + ++K
Sbjct: 1060 YEKVEDILEEFYVYRLDMYSARKKHWLGVYHSDYRKLKNQARFIQEIIDGELIVSKKRKP 1119
Query: 335 EMIAELIKRKYDSDP 349
++ EL RKY++ P
Sbjct: 1120 VLVQELRDRKYEAFP 1134
>gi|38453813|dbj|BAD02207.1| DNA topoisomerase II [Arthroderma simii]
gi|38453815|dbj|BAD02208.1| DNA topoisomerase II [Arthroderma simii]
Length = 1089
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 588 GLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAFSKKKADERKEWL--------R 639
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +T ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 640 QFKPGTYLDH----STDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTMF 695
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R++VKV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 696 KRNVRKDVKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRL 755
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ M + KA +GL + FKL +A S+M AFD G +T+++T
Sbjct: 914 DYKDYNTHTDVHFIIQMDEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETP 973
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ FYAVR++ Y KRK YL L + KL+NQARF+ DG L I +KK +I
Sbjct: 974 EDILRAFYAVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKAVLIQ 1033
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1034 ELQEKGFKPFP 1044
>gi|38453811|dbj|BAD02206.1| DNA topoisomerase II [Trichophyton quinckeanum]
Length = 1089
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 588 GLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAFSKKKADERKEWL--------R 639
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +T ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 640 QFKPGTYLDH----STDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTMF 695
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R++VKV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 696 KRNVRKDVKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRL 755
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ M + KA +GL + FKL +A S+M AFD G +T+++T
Sbjct: 914 DYKDYNTHTDVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETP 973
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ FYAVR++ Y KRK YL L + KL+NQARF+ DG L I +KK +I
Sbjct: 974 EDILRAFYAVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKAVLIQ 1033
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1034 ELQEKGFKPFP 1044
>gi|25006383|dbj|BAC24011.1| DNA topoisomerase II [Trichophyton interdigitale]
Length = 1093
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 590 GLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAFSKKKADERKEWL--------R 641
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +T ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 642 QFKPGTYLDH----STDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTMF 697
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R++VKV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 698 KRNVRKDVKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRL 757
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ M + KA +GL + FKL +A S+M AFD G +T+++T
Sbjct: 916 DYKDYNTHTDVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETP 975
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ FYAVR++ Y KRK YL L + KL+NQARF+ DG L I +KK +I
Sbjct: 976 EDILRAFYAVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKAVLIQ 1035
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1036 ELQEKGFKPFP 1046
>gi|346970470|gb|EGY13922.1| DNA topoisomerase [Verticillium dahliae VdLs.17]
Length = 1743
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 120/180 (66%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF+N++ H F ++ +AFSKK D RK WL ++
Sbjct: 722 GLGTSSNEDAQVYFTNLDDHLKEFDTMQSSEAELFDLAFSKKKADARKEWLGNFVPGT-- 779
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
YL +TK+ITY +FVN+ELILFS DN RSIPS+ DGLKPG RKV+F C
Sbjct: 780 ---------YL-DHSTKSITYDDFVNRELILFSMADNMRSIPSVLDGLKPGQRKVMFACF 829
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN ++ KV +LAG V+E +AYHHGE SL TII LAQNFVGSNN+N L+P G FG+ L
Sbjct: 830 KRNLTKDQKVVELAGYVSEKAAYHHGEMSLQQTIIGLAQNFVGSNNVNCLEPSGNFGSRL 889
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 80/135 (59%), Gaps = 6/135 (4%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEM----DGLHKVFKLQTTLAISSMCAFDRYGVLTK 274
DYKE++ V FV+ + D+ H ++ +G+ FKL +A S++ AFD G + K
Sbjct: 1058 DYKEFNDHKNVNFVIQL--DEKHYKDIHKTHEGIMDRFKLNKQIATSNLVAFDSTGRIRK 1115
Query: 275 FDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKK 334
++ IL+EFY RL+ Y+ RK + GV ++ KL NQARFI E DG+L + ++K
Sbjct: 1116 YEKVEDILEEFYVYRLDMYSARKKHWLGVYHSDYRKLKNQARFIQEIIDGELIVSKKRKP 1175
Query: 335 EMIAELIKRKYDSDP 349
++ EL RKY++ P
Sbjct: 1176 VLVQELRDRKYEAFP 1190
>gi|38453809|dbj|BAD02205.1| DNA topoisomerase II [Trichophyton interdigitale]
Length = 1089
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 588 GLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAFSKKKADERKEWL--------R 639
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +T ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 640 QFKPGTYLDH----STDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTMF 695
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R++VKV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 696 KRNVRKDVKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRL 755
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ M + KA +GL + FKL +A S+M AFD G +T+++T
Sbjct: 914 DYKDYNTHTDVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETP 973
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ FYAVR++ Y KRK YL L + KL+NQARF+ DG L I +KK +I
Sbjct: 974 EDILRAFYAVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKAVLIQ 1033
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1034 ELQEKGFKPFP 1044
>gi|38453817|dbj|BAD02209.1| DNA topoisomerase II [Trichophyton tonsurans]
Length = 1089
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 588 GLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAFSKKKADERKEWL--------R 639
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +T ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 640 QFKPGTYLDH----STDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTMF 695
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R++VKV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 696 KRNVRKDVKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRL 755
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ M + KA +GL + FKL +A S+M AFD G +T+++T
Sbjct: 914 DYKDYNTHTDVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETP 973
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ FYAVR++ Y KRK YL L + KL+NQARF+ DG L I +KK +I
Sbjct: 974 EDILRAFYAVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKAVLIQ 1033
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1034 ELQEKGFKPFP 1044
>gi|401837856|gb|EJT41712.1| TOP2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 1487
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 117/178 (65%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++E +EYFS+++RH +F ND +I +AFSKK D+RK WL R
Sbjct: 673 GLGTSLAREVREYFSDLDRHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWL--------R 724
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D T K I +F+NKELILFS DN RSIP++ DGLKPG RKVL+ C
Sbjct: 725 QYEPGTVLD----PTLKEIPIGDFINKELILFSLADNIRSIPNVLDGLKPGQRKVLYGCF 780
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N + E+KV LA V +AYHH E+SL TII LAQNFVGSNNINLL P G FGT
Sbjct: 781 KKNLKEEIKVGILASYVGGCTAYHHAEESLAQTIIGLAQNFVGSNNINLLLPNGAFGT 838
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H D +KF++T+SP+++ K G ++ FKL + +++ +M AFD +G + ++ +
Sbjct: 1001 DMEEQHDDN-IKFIITLSPEEMAKTRKIGFYERFKLVSPISLMNMVAFDPHGKIKRYYSA 1059
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
N+IL EF+ VRLEYY KRKD++ L E K + Q +FI D +L + N+ KK +I
Sbjct: 1060 NEILSEFFYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIDKELVVTNKLKKAIIQ 1119
Query: 339 EL 340
EL
Sbjct: 1120 EL 1121
>gi|294657090|ref|XP_459406.2| DEHA2E01738p [Debaryomyces hansenii CBS767]
gi|199432439|emb|CAG87617.2| DEHA2E01738p [Debaryomyces hansenii CBS767]
Length = 1411
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 118/178 (66%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST E +EYFS +++H F +D I +AFSKK D+RK WL +
Sbjct: 648 GLGTSTDAEGREYFSALDKHLKTFHALQGDDQQLIDLAFSKKKADDRKEWLQGF------ 701
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D + I ++F+NKELILFS DN RSIPS+ DG KPG RKVL+ C
Sbjct: 702 --EPGTHLD----PDLEEIPISDFINKELILFSMADNVRSIPSVLDGFKPGQRKVLYGCF 755
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + E+KV QLAG V+E++ YHHGEQSL+ TII LAQ+F+GSNN+N+L+P G FG+
Sbjct: 756 KRNLKSEIKVNQLAGYVSENTGYHHGEQSLVQTIIGLAQDFIGSNNLNILKPNGSFGS 813
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 86/141 (60%), Gaps = 6/141 (4%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H ++FVV +S D++ K+ GL + F L +++++++M AFD G + K+++
Sbjct: 975 DMEEQH-GMNIRFVVKLSADEMAKSLKVGLLERFNLISSVSLTNMVAFDPMGKIKKYESP 1033
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I+++FY VRLEYY +RKD++ + + KL+ QARFI D +L I N+K+ ++
Sbjct: 1034 LEIMRDFYYVRLEYYQRRKDHITDEMQHQLTKLSEQARFIKLIIDKELSISNKKRSVLVD 1093
Query: 339 ELIKRKY-----DSDPVKSWK 354
L K K+ +S PV K
Sbjct: 1094 ILQKFKFVKFDKNSKPVNDSK 1114
>gi|392895790|ref|NP_741252.2| Protein R05D3.12, isoform a [Caenorhabditis elegans]
gi|374095516|sp|P34534.5|TOP2M_CAEEL RecName: Full=Putative DNA topoisomerase 2, mitochondrial;
Short=DNA topoisomerase II; Flags: Precursor
gi|351064711|emb|CCD73199.1| Protein R05D3.12, isoform a [Caenorhabditis elegans]
Length = 1170
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 121/179 (67%), Gaps = 12/179 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS EA+EYFS+++ H + FKY+G DD IRMAF + DERK W+ RR
Sbjct: 633 GLGTSTSNEAREYFSDLDHHTVNFKYTGTTDDDAIRMAFDRDKSDERKEWI-------RR 685
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ ED T+ I+Y EFV+ +L+ F +D +RSIPSL DGLKP RK+L+T L
Sbjct: 686 SENEITNEDDGKTE----ISYQEFVDGQLMQFGMVDLKRSIPSLIDGLKPSQRKILWTLL 741
Query: 131 KRNDRR-EVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
D E+KV+QLAG+VA +YHHGE+SL+ TII + Q F GS+N+ LLQPIGQFGT
Sbjct: 742 NNMDESTEIKVSQLAGAVAHRQSYHHGEESLVRTIIRMGQTFCGSSNLPLLQPIGQFGT 800
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 88/208 (42%), Gaps = 30/208 (14%)
Query: 171 FVGSNNINLLQPIGQFGTFLFIFESTNLSGAVVNALDFGSGGWR-------------FES 217
F+ S I L++P E N S + ++ G W
Sbjct: 916 FISSGKIQLIRP-----------ERKNASTFSIEIVELPIGIWTSKYKEKLSKIVETLPV 964
Query: 218 NDYKEYHTDTTVKFVVTMSPDK----LHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLT 273
++ E HT+ V F +T+ K L K+ D L+ FKL+T+L + FDR G L
Sbjct: 965 LEFSERHTEKRVHFRITLDRKKSSRFLQKSNSDLLN-YFKLRTSLT-ENRVLFDRNGELK 1022
Query: 274 KFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKK 333
+F ++I EF+ VR + Y KR + A+ + + NQ FI +G + I + +
Sbjct: 1023 EFGNISEIAAEFFEVRRDLYEKRLKIQKEECEAKLIYVENQLNFIEMVTNGTIEIRSMGR 1082
Query: 334 KEMIAELIKRKYDSDPVKSWKMKQNKEN 361
++ +L + + DP+ + K N
Sbjct: 1083 NQLEEKLQEMGFRVDPMATIAKNSKKAN 1110
>gi|320593621|gb|EFX06030.1| DNA topoisomerase 2 [Grosmannia clavigera kw1407]
Length = 1724
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 125/182 (68%), Gaps = 12/182 (6%)
Query: 9 IAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEEC 68
+ GLG+S++++A+ YF+N++ H F+ ++ +AFSKK D RK WL ++
Sbjct: 744 LKGLGSSSNEDAQVYFTNLDAHLKEFETMQTDEAQLFDLAFSKKKADARKEWLGNFIPGT 803
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
++TK+ITY++FVNKELILFS DN RSIPS+ DGLKPG RKV++T
Sbjct: 804 ------------FLDQSTKSITYSDFVNKELILFSMADNMRSIPSVVDGLKPGQRKVIYT 851
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
CLK+N ++ KV +LAGSV++ +AYHHG+ SL TI+ LAQNFVGSNNIN L+P G FG+
Sbjct: 852 CLKKNIVKDQKVFELAGSVSKLAAYHHGDASLHQTIVGLAQNFVGSNNINCLEPSGNFGS 911
Query: 189 FL 190
L
Sbjct: 912 RL 913
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 73/134 (54%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE++ V FV+ M + A +GL FKL T+ +++ AFD G + +++
Sbjct: 1084 DYKEFNDHRNVHFVIQMEDKHVQAAVDEGLIDRFKLSKTVGTTNLVAFDINGQIRRYEKV 1143
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+EF+ RL Y RK + GV E KL NQ RF+ E DG L + +KK ++
Sbjct: 1144 EDILEEFFNYRLNMYGLRKKHWLGVYHTEFRKLNNQYRFVQEIMDGKLVVSKKKKDVVVE 1203
Query: 339 ELIKRKYDSDPVKS 352
EL R Y++ P +S
Sbjct: 1204 ELRARSYEAFPKES 1217
>gi|164425154|ref|XP_962372.2| DNA topoisomerase 2 [Neurospora crassa OR74A]
gi|157070812|gb|EAA33136.2| DNA topoisomerase 2 [Neurospora crassa OR74A]
Length = 1909
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 121/182 (66%), Gaps = 12/182 (6%)
Query: 9 IAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEEC 68
+ GLG+ST+ +A+ YF+N+ +H F + +AFSKK D RK WL +C
Sbjct: 711 LKGLGSSTTDDAQLYFTNLNKHLKEFDVMTREESEMFELAFSKKKADARKEWLA----KC 766
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
E G D+ +T+ I+YT+FVN+ELILFS DN RSIPS+ DGLKPG RKVLF
Sbjct: 767 ----EPGTYLDH----STEKISYTDFVNRELILFSMADNIRSIPSMVDGLKPGQRKVLFG 818
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
C K+N + KV +LAG V++ +AYHHGEQSL TII LAQNFVGSNNIN L+P G FG+
Sbjct: 819 CFKQNLIHDQKVVELAGYVSKEAAYHHGEQSLQQTIIGLAQNFVGSNNINCLEPSGNFGS 878
Query: 189 FL 190
L
Sbjct: 879 RL 880
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEY+ TV F++ + + A DGL + FKL T+A +++ AFD G + K++
Sbjct: 1050 DYKEYNDHQTVHFIIALEEKHMSSALRDGLIEKFKLTKTVATTNLVAFDTRGKIHKYENP 1109
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I++E+Y RL Y +RK + V A+ KL NQ RFI E + L + +KK ++
Sbjct: 1110 QEIMEEYYHYRLNLYGERKKHWLKVYHADYRKLQNQYRFISEIIENKLVVSKKKKSVLVQ 1169
Query: 339 ELIKRKYDSDPVKS 352
EL +RKY++ P KS
Sbjct: 1170 ELRERKYEAFPPKS 1183
>gi|402578922|gb|EJW72875.1| hypothetical protein WUBG_16218 [Wuchereria bancrofti]
Length = 202
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 82/128 (64%), Positives = 106/128 (82%), Gaps = 1/128 (0%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYF++M RHRI F+Y+G+ DD+ + MAFSKK +++RK WLT WM ++
Sbjct: 75 GLGTSTSKEAKEYFTDMVRHRIRFQYAGEEDDSSLDMAFSKKKIEDRKVWLTNWMAVRKK 134
Query: 71 -RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
R+E G+ E+YLY K T+A+++ +FVNKEL+LFSN DNERSIPSL DGLKPG RKVLFTC
Sbjct: 135 TRREQGLTEEYLYDKDTRAVSFKDFVNKELVLFSNADNERSIPSLVDGLKPGQRKVLFTC 194
Query: 130 LKRNDRRE 137
KR D+++
Sbjct: 195 FKRADKKK 202
>gi|336471051|gb|EGO59212.1| DNA topoisomerase 2 [Neurospora tetrasperma FGSC 2508]
gi|350292130|gb|EGZ73325.1| DNA topoisomerase 2 [Neurospora tetrasperma FGSC 2509]
Length = 1907
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 121/182 (66%), Gaps = 12/182 (6%)
Query: 9 IAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEEC 68
+ GLG+ST+ +A+ YF+N+ +H F + +AFSKK D RK WL +C
Sbjct: 711 LKGLGSSTTDDAQLYFTNLNKHLKEFDVMTREESEMFELAFSKKKADARKEWLA----KC 766
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
E G D+ +T+ I+YT+FVN+ELILFS DN RSIPS+ DGLKPG RKVLF
Sbjct: 767 ----EPGTYLDH----STEKISYTDFVNRELILFSMADNIRSIPSMVDGLKPGQRKVLFG 818
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
C K+N + KV +LAG V++ +AYHHGEQSL TII LAQNFVGSNNIN L+P G FG+
Sbjct: 819 CFKQNLIHDQKVVELAGYVSKEAAYHHGEQSLQQTIIGLAQNFVGSNNINCLEPSGNFGS 878
Query: 189 FL 190
L
Sbjct: 879 RL 880
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEY+ TV F++ + + A DGL + FKL T+A +++ AFD G + K++
Sbjct: 1050 DYKEYNDHQTVHFIIALEEKHMSSALRDGLIEKFKLTKTVATTNLVAFDTRGKIHKYENP 1109
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I++E+Y RL Y +RK + V A+ KL NQ RFI E + L + +KK ++
Sbjct: 1110 QEIMEEYYHYRLNLYGERKKHWLKVYHADYRKLQNQYRFISEIIENKLVVSKKKKSVLVQ 1169
Query: 339 ELIKRKYDSDPVKS 352
EL +RKY++ P KS
Sbjct: 1170 ELRERKYEAFPPKS 1183
>gi|38453797|dbj|BAD02199.1| DNA topoisomerase II [Arthroderma racemosum]
Length = 1089
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 586 GLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAFSKKKADERKEWL--------R 637
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +T ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 638 QFKPGTYLDH----STDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTMF 693
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R+++KV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 694 KRNVRKDIKVVELAGYVSGMTAYQHGDNSLHATIVGLAQTFVGSNNINCLEPSGNFGSRL 753
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 81/132 (61%), Gaps = 1/132 (0%)
Query: 219 DYKEYHTDTTVKFVVTMS-PDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
DY++Y+T T V F++ + + KA DGL + FKL +A S+M AFD G +T+++T
Sbjct: 912 DYRDYNTHTNVHFIIQSGVKNTVKKAVEDGLEERFKLVKPIATSNMVAFDAEGRITRYET 971
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
IL+ FYAVR++ Y KRK +L L ++ KLTNQARF+ DG L I +KK +I
Sbjct: 972 PEDILRAFYAVRIKLYEKRKQHLLSQLQSQLEKLTNQARFVQMIIDGKLVISKKKKAVLI 1031
Query: 338 AELIKRKYDSDP 349
EL ++ + P
Sbjct: 1032 QELQEKAFKPFP 1043
>gi|38453825|dbj|BAD02213.1| DNA topoisomerase II [Arthroderma benhamiae]
Length = 1089
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 588 GLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAFSKKKADERKEWL--------R 639
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +T ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 640 QFKPGTYLDH----STDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTMF 695
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R+++KV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 696 KRNVRKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRL 755
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ M + KA +GL + FKL +A S+M AFD G +T+++T
Sbjct: 914 DYKDYNTHTNVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETP 973
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ FYAVR++ Y KRK YL L + KL+NQARF+ DG L I +KK +I
Sbjct: 974 EDILRAFYAVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKAVLIQ 1033
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1034 ELQEKGFKPFP 1044
>gi|38453823|dbj|BAD02212.1| DNA topoisomerase II [Arthroderma benhamiae]
Length = 1089
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 588 GLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAFSKKKADERKEWL--------R 639
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +T ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 640 QFKPGTYLDH----STDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTMF 695
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R+++KV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 696 KRNVRKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRL 755
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ M + KA +GL + FKL +A S+M AFD G +T+++T
Sbjct: 914 DYKDYNTHTNVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETP 973
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ FYAVR++ Y KRK YL L + KL+NQARF+ DG L I +KK +I
Sbjct: 974 EDILRAFYAVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKAVLIQ 1033
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1034 ELQEKGFKPFP 1044
>gi|38453821|dbj|BAD02211.1| DNA topoisomerase II [Arthroderma benhamiae]
Length = 1089
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 588 GLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAFSKKKADERKEWL--------R 639
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +T ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 640 QFKPGTYLDH----STDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTMF 695
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R+++KV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 696 KRNVRKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRL 755
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ M + KA +GL + FKL +A S+M AFD G +T+++T
Sbjct: 914 DYKDYNTHTNVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETP 973
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ FYAVR++ Y KRK YL L + KL+NQARF+ DG L I +KK +I
Sbjct: 974 EDILRAFYAVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKAVLIQ 1033
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1034 ELQEKGFKPFP 1044
>gi|38453819|dbj|BAD02210.1| DNA topoisomerase II [Trichophyton verrucosum]
Length = 1089
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 588 GLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAFSKKKADERKEWL--------R 639
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +T ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 640 QFKPGTYLDH----STDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTMF 695
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R+++KV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 696 KRNVRKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRL 755
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 81/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ M + KA +GL + FKL +A S+M AFD G +T+++T
Sbjct: 914 DYKDYNTHTNVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETP 973
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ FYAVR++ Y KRK YL L + KL+NQARF+ DG+L I +KK +I
Sbjct: 974 EDILRAFYAVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGELVISKKKKAVLIQ 1033
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1034 ELQEKGFKPFP 1044
>gi|452983146|gb|EME82904.1| hypothetical protein MYCFIDRAFT_164213 [Pseudocercospora fijiensis
CIRAD86]
Length = 1278
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 124/180 (68%), Gaps = 11/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +++A+ YF+++++H F D++ + MAFSKK D RKTWL ++
Sbjct: 605 GLGTSDTRDAQIYFADLDKHLKTFHAMQDHEPELLEMAFSKKKADARKTWLQNFVPGT-- 662
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
YL T+ ITY +F+NKELILFS DN+RSIPS+ DGLKPG RKV++TC
Sbjct: 663 ---------YLDMSGTEEITYDDFINKELILFSMADNQRSIPSVIDGLKPGQRKVMYTCF 713
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN ++++KV +LAG V+ +AY +G+ SL TI+ +AQNFVGSNN+N+L+P G FG+ L
Sbjct: 714 RRNMKKDMKVVELAGLVSGLTAYPYGDASLQQTIVAMAQNFVGSNNMNVLEPSGNFGSRL 773
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY EY+T TV F + + L + E L ++FKL T +++ AFD G + K+ +
Sbjct: 936 DYVEYNTPETVHFEIKLEAKTLQQNE-GKLEELFKLSNTQVTTNLVAFDPQGRIYKYASP 994
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I++EFY VRL+ Y +RKD+L + E KL NQARF+ +L + +KK ++
Sbjct: 995 LDIIEEFYHVRLQKYQQRKDWLLSEMHKELDKLNNQARFVNMIIKNELVVSKKKKAVLVK 1054
Query: 339 ELIK 342
EL K
Sbjct: 1055 ELDK 1058
>gi|406864759|gb|EKD17803.1| DNA topoisomerase 2 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1725
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 120/180 (66%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++A+ YFSN++ H F+ ++ I +AFSKK D RKTWL ++
Sbjct: 752 GLGTSLPEDAQVYFSNLDNHLREFEVMTQAEEELIDLAFSKKKADARKTWLGNFLP---- 807
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G D+ +TK +TY F+NKELILFS DN RSIPS+ DG KPG RKV+F C
Sbjct: 808 ----GTFLDH----STKTLTYDNFINKELILFSMADNIRSIPSVIDGFKPGQRKVMFACF 859
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +++KV +LAG V+E++AYHHGE S+ TI+ LAQNF GSNNIN L+P G FG+ L
Sbjct: 860 KRNLVKDMKVVELAGYVSENTAYHHGEASMHMTIVGLAQNFTGSNNINCLEPSGNFGSRL 919
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 77/131 (58%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEY+ +V FVV + + A DGL FKL+ T+A S++ AFD G + K++
Sbjct: 1087 DYKEYNDHKSVHFVVQLDEKHMKSALTDGLLDRFKLKKTVATSNLVAFDPRGQIKKYENV 1146
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL+EFY R Y KRK Y + E KL NQARF++E D L + +KK ++A
Sbjct: 1147 EEILEEFYVYRFAMYTKRKAYWLAKINTEYRKLRNQARFVLEIIDNQLVVSKQKKPVLVA 1206
Query: 339 ELIKRKYDSDP 349
EL KR YD+ P
Sbjct: 1207 ELRKRGYDAFP 1217
>gi|448121442|ref|XP_004204208.1| Piso0_000036 [Millerozyma farinosa CBS 7064]
gi|358349747|emb|CCE73026.1| Piso0_000036 [Millerozyma farinosa CBS 7064]
Length = 1406
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 120/178 (67%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST E +EYF+ ++RH F +D + I +AFSKK D+RK WL +
Sbjct: 648 GLGTSTLMEGREYFAALDRHLKKFHALQGDDKSSIDLAFSKKKADDRKEWLQCF------ 701
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D L + I ++F+NKELILFS DN RSIPS+ DG KPG RKVL+ C
Sbjct: 702 --EPGTHLDPLL----QEIPISDFINKELILFSMADNIRSIPSVLDGFKPGQRKVLYGCF 755
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+RN ++KV+QLAG V+E++ YHHGE SL+ TII LAQ+F+GSNN+N+L+PIG FG+
Sbjct: 756 RRNLTVDIKVSQLAGYVSENTGYHHGEASLVQTIIGLAQDFIGSNNLNVLKPIGTFGS 813
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 76/121 (62%)
Query: 222 EYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQI 281
E H +KF++ +S +++ K+ GL + FKL + + +S+M FD G + K+++ QI
Sbjct: 977 EEHHGMNIKFIIKLSEEEMAKSHKIGLLERFKLISVINLSNMVLFDPSGRIKKYESPLQI 1036
Query: 282 LKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELI 341
++EF+ VRLEYY +RKD+L L + LKL+ QARFI D + + N+K+ ++ +L
Sbjct: 1037 VREFFYVRLEYYQRRKDFLTDKLQNQLLKLSEQARFIKHIIDNKISLSNKKRSVLVQQLQ 1096
Query: 342 K 342
K
Sbjct: 1097 K 1097
>gi|310795452|gb|EFQ30913.1| topoisomerase IV [Glomerella graminicola M1.001]
Length = 1779
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 122/180 (67%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF+N++ H F ++ +AFSKK D RK WL ++
Sbjct: 714 GLGTSSNEDAQVYFTNLDDHLKEFDTMKPDEVELFDLAFSKKKADARKEWLGNFVP---- 769
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G D+ +TK+ITYT+FVNKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 770 ----GTFLDH----STKSITYTDFVNKELILFSMADNMRSIPSVVDGLKPGQRKVIYACF 821
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN ++ KV +LAG ++E ++YHHGE SL TII LAQNFVGSNN+N L+P G FG+ L
Sbjct: 822 KRNLVKDQKVVELAGYISEQTSYHHGEVSLQQTIIGLAQNFVGSNNVNCLEPSGNFGSRL 881
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 82/133 (61%), Gaps = 4/133 (3%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEM--DGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
DYKE++ V FV+ M D H ++ DGL + FKL +A S++ AFD G + K++
Sbjct: 1050 DYKEFNDHKNVHFVIQM--DDKHTKDILADGLLERFKLSKQIATSNLVAFDTRGQIRKYE 1107
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
IL+EFY RL+ YA+RK + GV ++ KL+ QARFI E +G L + ++K+ +
Sbjct: 1108 KVEDILEEFYNYRLDMYAQRKKHWLGVYHSDFRKLSEQARFIREIIEGKLVVAKKRKQVL 1167
Query: 337 IAELIKRKYDSDP 349
+ EL KRKY++ P
Sbjct: 1168 VEELAKRKYEAFP 1180
>gi|328876909|gb|EGG25272.1| DNA topoisomerase II [Dictyostelium fasciculatum]
Length = 1233
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 120/180 (66%), Gaps = 11/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGT+TS EAKEYFSN+++H I F +SG+ I MAF+K V R+ WL +
Sbjct: 704 GLGTNTSAEAKEYFSNLKKHIIKFTWSGEPSSNAIAMAFNKDAVQARQRWLLS------- 756
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ D+ + K +++ +F+NKELI +S N RSIPS+ DGLKPG RK+L+
Sbjct: 757 SDTTQLSVDH----SIKELSFDDFINKELIHYSWAANHRSIPSVMDGLKPGQRKILYAAF 812
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR E+KVAQ +G VAEH+AYHHGEQSL STI+ +AQ+FVGSNNI LL GQFGT L
Sbjct: 813 KRKLTSEIKVAQFSGYVAEHTAYHHGEQSLSSTIVKMAQDFVGSNNIPLLTSGGQFGTRL 872
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 7/135 (5%)
Query: 221 KEYH---TDTTVKFVVTMSPDKLHKA-EM--DGLHKVFKLQTTLAISSMCAFDRYGVLTK 274
K YH T+ +V F + + D+L + EM + L FKL ++L S++ FD G + K
Sbjct: 1030 KSYHDGNTENSVSFTIHFTNDQLEEIDEMTDNELIDKFKLNSSLH-SNLMLFDTNGNIKK 1088
Query: 275 FDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKK 334
+++T +I+ EF+ R + Y RK L+ L + K +FI G +++ + K+
Sbjct: 1089 YESTEEIIGEFFQYRRKLYVDRKKMLQDRLKKQIDKFNVTIQFISLIASGKVKLGGKTKQ 1148
Query: 335 EMIAELIKRKYDSDP 349
+I EL K K+ P
Sbjct: 1149 LIIEELHKNKFKLAP 1163
>gi|25006391|dbj|BAC24015.1| DNA topoisomerase II [Epidermophyton floccosum]
Length = 1091
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 588 GLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAFSKKKADERKEWL--------R 639
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +T ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 640 QFKPGTYLDH----STDHITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTMF 695
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R+++KV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 696 KRNVRKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRL 755
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 79/131 (60%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ M + KA +GL + FKL +A S+M AFD G +T+++T
Sbjct: 914 DYKDYNTHTNVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETP 973
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ FYAVR++ Y KRK YL L KL+NQARF+ DG L I +KK +I
Sbjct: 974 EDILRAFYAVRIKLYEKRKQYLLSELQTRLDKLSNQARFVQMIIDGKLVISKKKKALLIQ 1033
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1034 ELQEKGFKPFP 1044
>gi|164663033|ref|XP_001732638.1| hypothetical protein MGL_0413 [Malassezia globosa CBS 7966]
gi|159106541|gb|EDP45424.1| hypothetical protein MGL_0413 [Malassezia globosa CBS 7966]
Length = 1376
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 117/178 (65%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS E KEYF +M+RH + F D + +AF+KK D+RK WL ++
Sbjct: 585 GLGTSKPYEMKEYFRDMDRHMLSFDTIRPEDHDLLDLAFNKKKADDRKEWLRQFVPGT-- 642
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
YL + + I ++F+NKELILFS DN RSIPS+ DGLKPG RKV+F+C
Sbjct: 643 ---------YLDHRI-RNIPISDFINKELILFSMADNIRSIPSVVDGLKPGQRKVIFSCF 692
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR + E+KV QL G V+EHSAYHHG+Q+L TI+ LAQ+F GSNN+NLL P GQFG+
Sbjct: 693 KRKLKTEIKVHQLQGYVSEHSAYHHGDQALTMTIVGLAQDFCGSNNVNLLMPNGQFGS 750
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 86/145 (59%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
+YKEYHTDT+V FVV ++P + + E G FKL T L+ S+M F+ G + K+ T
Sbjct: 913 EYKEYHTDTSVHFVVELNPRGMEEIERVGPDTFFKLSTMLSTSNMVLFNPEGKIKKYATP 972
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL++FY VRL +Y +RK++L L +L+NQARF+ +L + N+KK ++
Sbjct: 973 QEILEDFYFVRLGFYQRRKEHLVDQLKLVYDRLSNQARFVSMIIARELSVSNKKKAAIVE 1032
Query: 339 ELIKRKYDSDPVKSWKMKQNKENAL 363
EL + K+ + P K K E A+
Sbjct: 1033 ELRQLKFQAFPKVEAKAKSVTEEAV 1057
>gi|336270720|ref|XP_003350119.1| TOP2 protein [Sordaria macrospora k-hell]
gi|380095513|emb|CCC06986.1| putative TOP2 protein [Sordaria macrospora k-hell]
Length = 1915
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 121/182 (66%), Gaps = 12/182 (6%)
Query: 9 IAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEEC 68
+ GLG+ST+ +A+ YF+N+ +H F + +AFSKK D RK WL +C
Sbjct: 724 LKGLGSSTTDDAQIYFTNLTKHLKEFDVMTREESEMFELAFSKKKADARKEWLA----KC 779
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
E G D+ +T+ I+YT+FVN+ELILFS DN RSIPS+ DGLKPG RKVLF
Sbjct: 780 ----EPGTYLDH----STEKISYTDFVNRELILFSMADNIRSIPSMVDGLKPGQRKVLFG 831
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
C K+N + KV +LAG V++ +AYHHGEQSL TI+ LAQNFVGSNNIN L+P G FG+
Sbjct: 832 CFKQNLIHDQKVVELAGYVSKEAAYHHGEQSLQQTIVGLAQNFVGSNNINCLEPSGNFGS 891
Query: 189 FL 190
L
Sbjct: 892 RL 893
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 80/134 (59%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEY+ TV F++ + ++ A DGL + FKL T+A +++ AFD G + K++
Sbjct: 1063 DYKEYNDHQTVHFIIALEEKQMSSALRDGLIEKFKLTKTVATTNLVAFDTRGKIYKYENP 1122
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I++E+Y RL Y +RK + V A+ KL NQ RFI E + L + +KK ++
Sbjct: 1123 QEIMEEYYHYRLNLYGERKKHWLKVYHADYRKLQNQYRFISEIIENKLIVAKKKKSVLVQ 1182
Query: 339 ELIKRKYDSDPVKS 352
EL +RKY++ P KS
Sbjct: 1183 ELRERKYEAFPPKS 1196
>gi|38453799|dbj|BAD02200.1| DNA topoisomerase II [Arthroderma obtusum]
Length = 1086
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 586 GLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAFSKKKADERKEWL--------R 637
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +T ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 638 QFKPGTYLDH----STDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTMF 693
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R+++KV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNN+N L+P G FG+ L
Sbjct: 694 KRNVRKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNVNCLEPSGNFGSRL 753
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 79/131 (60%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ M + KA +GL + FKL +A S+M AFD G +T+++T
Sbjct: 912 DYKDYNTHTNVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETP 971
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ FYAVR++ Y KRK +L L KL+NQARF+ DG L I +KK +I
Sbjct: 972 EDILRAFYAVRIKLYEKRKQHLLSELQTHLDKLSNQARFVQMIIDGKLVISKKKKALLIQ 1031
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1032 ELQEKGFKPFP 1042
>gi|18369818|dbj|BAB84104.1| DNA topoisomerase II [Penicillium citrinum]
Length = 1100
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++ +A+ YF +++RH F D++ I +AFSKK DERK WL R
Sbjct: 593 GLGTSSTTDAQVYFRDLDRHLKEFHTMKDHEAELIELAFSKKKADERKEWL--------R 644
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +K I+YT+F+NKELILFS DN+RSIPS+ DGLKPG RKVL+ C
Sbjct: 645 QFKPGTYLDHSVSK----ISYTDFINKELILFSMADNQRSIPSVVDGLKPGQRKVLYACF 700
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN ++++KV +LAG V+ +AY HGE SL TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 701 RRNLKKDMKVVELAGLVSGMTAYQHGETSLQQTIVGLAQTFVGSNNINCLEPSGNFGSRL 760
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 78/127 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T V FV+ + + A +GL + FKL ++A S++ AFD G +TK+ T
Sbjct: 920 DYKDYNTHDKVHFVIQLDEKNMKAALSEGLEEKFKLTKSIATSNLVAFDPEGRITKYATV 979
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ ILKEF+ VRL+YY +RK + L E KL+NQARF+ DG L I +KK ++
Sbjct: 980 DDILKEFFTVRLKYYERRKQHQLSELQKELEKLSNQARFVQMIIDGKLVISKKKKSVLVN 1039
Query: 339 ELIKRKY 345
EL ++ +
Sbjct: 1040 ELREKGF 1046
>gi|46136571|ref|XP_389977.1| hypothetical protein FG09801.1 [Gibberella zeae PH-1]
Length = 1650
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 121/186 (65%), Gaps = 12/186 (6%)
Query: 5 HDVMIAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTW 64
H GLGTS++++A+ YF+N++ H F+ + + +AFSKK D RK WL +
Sbjct: 694 HSKYFKGLGTSSNEDAQVYFTNLDDHLKEFEVMKPEESKMLELAFSKKKADARKEWLGNF 753
Query: 65 MEECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRK 124
+ G D+ + K I Y++F+N+ELILFS DN RSIPS+ DG KPG RK
Sbjct: 754 VP--------GTFLDH----SAKQICYSDFINRELILFSMADNMRSIPSVLDGFKPGQRK 801
Query: 125 VLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIG 184
V++ C KRN ++ KV +LAG V+E +AYHHGEQSL TII LAQNFVGSNNIN L+P G
Sbjct: 802 VIYACFKRNLIKDKKVVELAGYVSEQTAYHHGEQSLQQTIIGLAQNFVGSNNINCLEPSG 861
Query: 185 QFGTFL 190
FG+ L
Sbjct: 862 NFGSRL 867
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 79/138 (57%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE++ +TV F + + + K +G+ + FKL +A S++ AFD G + K++
Sbjct: 1037 DYKEFNDHSTVHFEIAVDDKHMGKVMEEGILERFKLTKQVATSNLVAFDTSGRIRKYEKV 1096
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL+EFY RL+ Y RK + GV A+ KL NQARFI E D L + +KK ++
Sbjct: 1097 EEILEEFYQYRLDMYTDRKKHWLGVYHADLRKLQNQARFIKEIIDNKLVVGKKKKAVLVQ 1156
Query: 339 ELIKRKYDSDPVKSWKMK 356
EL R Y++ P + K K
Sbjct: 1157 ELRDRDYEAFPPRGDKKK 1174
>gi|380477884|emb|CCF43907.1| topoisomerase IV, partial [Colletotrichum higginsianum]
Length = 1728
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 121/180 (67%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF+N++ H F + +AFSKK D RK WL ++
Sbjct: 657 GLGTSSNEDAQVYFTNLDDHLKEFDTMKPEEVELFDLAFSKKKADARKEWLGNFVP---- 712
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G D+ +TK+ITYT+FVN+ELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 713 ----GTFLDH----STKSITYTDFVNRELILFSMADNMRSIPSVVDGLKPGQRKVMYACF 764
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN ++ KV +LAG ++E ++YHHGE SL TII LAQNFVGSNNIN L+P G FG+ L
Sbjct: 765 KRNLVKDQKVVELAGYISEQTSYHHGEASLQQTIIGLAQNFVGSNNINCLEPSGNFGSRL 824
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 83/133 (62%), Gaps = 4/133 (3%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEM--DGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
DYKE++ V FV+ M D H ++ DGL + FKL +A S++ AFD G + K++
Sbjct: 993 DYKEFNDHKNVHFVIQM--DDKHSKDVLADGLMERFKLSKQVATSNLVAFDTRGQIRKYE 1050
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
+IL+EFY RL+ YA+RK + GV ++ KL+ QARFI E DG L + +KK+ +
Sbjct: 1051 KVEEILEEFYNYRLDMYAQRKKHWLGVYHSDYRKLSEQARFIREIIDGKLIVAKKKKQVL 1110
Query: 337 IAELIKRKYDSDP 349
+ EL KRKY++ P
Sbjct: 1111 VEELAKRKYEAFP 1123
>gi|408399894|gb|EKJ78984.1| hypothetical protein FPSE_00841 [Fusarium pseudograminearum CS3096]
Length = 1652
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 121/186 (65%), Gaps = 12/186 (6%)
Query: 5 HDVMIAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTW 64
H GLGTS++++A+ YF+N++ H F+ + + +AFSKK D RK WL +
Sbjct: 694 HSKYFKGLGTSSNEDAQVYFTNLDDHLKEFEVMKPEESKMLELAFSKKKADARKEWLGNF 753
Query: 65 MEECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRK 124
+ G D+ + K I Y++F+N+ELILFS DN RSIPS+ DG KPG RK
Sbjct: 754 VP--------GTFLDH----SAKQICYSDFINRELILFSMADNMRSIPSVLDGFKPGQRK 801
Query: 125 VLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIG 184
V++ C KRN ++ KV +LAG V+E +AYHHGEQSL TII LAQNFVGSNNIN L+P G
Sbjct: 802 VIYACFKRNLIKDKKVVELAGYVSEQTAYHHGEQSLQQTIIGLAQNFVGSNNINCLEPSG 861
Query: 185 QFGTFL 190
FG+ L
Sbjct: 862 NFGSRL 867
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 79/138 (57%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE++ +TV F + + + K +G+ + FKL +A S++ AFD G + K++
Sbjct: 1037 DYKEFNDHSTVHFEIAVDDKHMGKVMEEGILERFKLTKQVATSNLVAFDTSGRIRKYEKV 1096
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL+EFY RL+ Y RK + GV A+ KL NQARFI E D L + +KK ++
Sbjct: 1097 EEILEEFYQYRLDMYTDRKKHWLGVYHADLRKLQNQARFIKEIIDNKLVVGKKKKAVLVQ 1156
Query: 339 ELIKRKYDSDPVKSWKMK 356
EL R Y++ P + K K
Sbjct: 1157 ELRDRDYEAFPPRGDKKK 1174
>gi|302895481|ref|XP_003046621.1| hypothetical protein NECHADRAFT_33819 [Nectria haematococca mpVI
77-13-4]
gi|256727548|gb|EEU40908.1| hypothetical protein NECHADRAFT_33819 [Nectria haematococca mpVI
77-13-4]
Length = 1677
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 123/190 (64%), Gaps = 12/190 (6%)
Query: 1 MNTIHDVMIAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTW 60
M H GLGTS++++A+ YF+N++ H F+ + + +AFSKK D RK W
Sbjct: 705 MGRWHSKYYKGLGTSSNEDAQVYFTNLDDHLKEFEVMKPEEADLLDLAFSKKKADARKEW 764
Query: 61 LTTWMEECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKP 120
L ++ YL +TK+I+Y++F+N+ELILFS DN RSIPS+ DG KP
Sbjct: 765 LGNFVPGT-----------YL-DHSTKSISYSDFINRELILFSMADNMRSIPSVLDGFKP 812
Query: 121 GSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLL 180
G RKVL+ C KRN ++ KV +L+G V+E +AYHHGE SL TII LAQNFVGSNNIN L
Sbjct: 813 GQRKVLYACFKRNLVKDKKVVELSGYVSEQTAYHHGEASLQQTIIGLAQNFVGSNNINCL 872
Query: 181 QPIGQFGTFL 190
+P G FG+ L
Sbjct: 873 EPSGNFGSRL 882
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 79/138 (57%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE++ + V F V M K +G+ + FKL +A S++ AFD G + K++
Sbjct: 1052 DYKEFNDHSVVHFEVMMDEKHTEKVLEEGILERFKLLKQVATSNLVAFDSRGQIRKYEKV 1111
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+E+Y R + Y +RK Y GV A+ KL NQARFI E DG+L + +KK ++
Sbjct: 1112 EDILEEYYHYRFDMYTERKKYWLGVYHADYRKLKNQARFIKEIIDGELIVGKKKKTVLVQ 1171
Query: 339 ELIKRKYDSDPVKSWKMK 356
EL RKY++ P S K K
Sbjct: 1172 ELRDRKYEAFPRGSDKKK 1189
>gi|443895754|dbj|GAC73099.1| hypothetical protein PANT_8d00062 [Pseudozyma antarctica T-34]
Length = 2299
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 115/181 (63%), Gaps = 12/181 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS S++AK+YF M++H + F + D D I +AF+KK D+RK WL R
Sbjct: 1658 GLGTSDSQDAKKYFRAMDKHMLPFDVTKDGDRELIDLAFNKKKADDRKEWL--------R 1709
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ G D+ I Y +F+NKELILFS DN RSIPS DGLKPG RKV+F
Sbjct: 1710 QFRPGTYLDH----NIDTIPYADFINKELILFSMADNLRSIPSAVDGLKPGQRKVIFGTF 1765
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
R E+KVAQL G + +AYHHG+ SL TI+ LAQNFVGSNN+NLL+P GQFGT L
Sbjct: 1766 NRRGDGEIKVAQLVGHIIGTTAYHHGDASLTMTIVGLAQNFVGSNNVNLLEPRGQFGTRL 1825
Query: 191 F 191
Sbjct: 1826 L 1826
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 76/122 (62%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHT++TV F+V ++ + G+ FK+ ++ ++M FD+ G + K+ T
Sbjct: 1986 DYKEYHTESTVHFIVELTAKGQAEIADKGVEAFFKMSAQISTTNMVLFDQDGKIKKYSTP 2045
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL++FY +RL YY KRK++L L +L+NQARF+ + L + NRK+ +++A
Sbjct: 2046 EEILEDFYLLRLSYYQKRKEHLVDQLKLMYDRLSNQARFVQMIINRQLVVSNRKRADIVA 2105
Query: 339 EL 340
+L
Sbjct: 2106 DL 2107
>gi|345563425|gb|EGX46426.1| hypothetical protein AOL_s00109g184 [Arthrobotrys oligospora ATCC
24927]
Length = 1586
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 119/180 (66%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+S EAKEYFS++++H F + I M FSKK ++ERK WL R
Sbjct: 730 GLGTSSSAEAKEYFSDLDKHLKEFHSMKLEERGLIDMVFSKKKIEERKEWL--------R 781
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ G+ D+ + + I+Y +F+NKELILFS DN RSIPS DGLKPG RKVLF C
Sbjct: 782 QYRPGVYLDH----SIEKISYDDFINKELILFSMADNIRSIPSAIDGLKPGQRKVLFGCF 837
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
K+ +EVKV LAG V +H+ Y HG+ SL TII LAQ FVGSNN+N+L+PIG FG+ L
Sbjct: 838 KKKLSKEVKVQSLAGYVLDHTHYQHGDVSLAQTIIALAQTFVGSNNVNILEPIGNFGSRL 897
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 80/129 (62%), Gaps = 1/129 (0%)
Query: 219 DYKEYHTDTTVKFVVTM-SPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
DY +Y++D V F+V + S + A +GL FKL T + ++M AFD G LT+++T
Sbjct: 1070 DYLDYNSDLRVHFIVELDSKASMEAALKEGLETRFKLNKTASTTNMVAFDAQGRLTRYET 1129
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEFY VRL+ Y RKDYL G L + KLTNQARF+ +L + N+K+ +I
Sbjct: 1130 PEDILKEFYFVRLKLYQSRKDYLLGELNKQLRKLTNQARFVQMIIKKELVVSNKKRAVLI 1189
Query: 338 AELIKRKYD 346
AEL +K+D
Sbjct: 1190 AELRSQKFD 1198
>gi|296809619|ref|XP_002845148.1| DNA topoisomerase II [Arthroderma otae CBS 113480]
gi|238844631|gb|EEQ34293.1| DNA topoisomerase II [Arthroderma otae CBS 113480]
Length = 1676
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 124/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF ++++H F D + I +AFSKK DERK WL R
Sbjct: 716 GLGTSSTEDAQIYFQDLDKHLKQFHTLQDKEAELIELAFSKKKADERKEWL--------R 767
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +T+ ITY++F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 768 QFKPGTYLDH----STEQITYSDFINKELILFSMADNIRSIPSVIDGLKPGQRKVLYTMF 823
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R+++KV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 824 KRNVRKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRL 883
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ M + KA +GL + FKL +A S+M AFD G +T+++T
Sbjct: 1042 DYKDYNTHTNVHFIIQMDEKHMKKALEEGLEEKFKLIKPIATSNMVAFDAEGRITRYETP 1101
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ FYAVR++ Y +RK +L L ++ KL+NQARF+ DG L I +KK +I
Sbjct: 1102 EDILQAFYAVRIKLYERRKQHLLSQLQSQLDKLSNQARFVQMIIDGKLVISKKKKTILIQ 1161
Query: 339 ELIKRKYDSDP 349
EL + + P
Sbjct: 1162 ELKDKAFKPFP 1172
>gi|38453807|dbj|BAD02204.1| DNA topoisomerase II [Arthroderma persicolor]
Length = 1086
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF ++++H F D + I +AFSKK DERK WL R
Sbjct: 586 GLGTSSTEDAQIYFQDLDKHLKEFHTLQDKEAELIELAFSKKKADERKEWL--------R 637
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +T ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 638 QFKPGTYLDH----STDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTMF 693
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R+++KV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 694 KRNVRKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRL 753
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ M + KA +GL + FKL +A S+M AFD G +T+++T
Sbjct: 912 DYKDYNTHTNVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETP 971
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ FYAVR++ Y KRK +L L + KL+NQARFI DG L I +KK +I
Sbjct: 972 EDILRAFYAVRIKLYEKRKQHLLSELQTQLDKLSNQARFIQMIIDGKLVISKKKKALLIQ 1031
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1032 ELQEKGFKPFP 1042
>gi|74149415|dbj|BAE36361.1| unnamed protein product [Mus musculus]
Length = 375
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 85/141 (60%), Positives = 109/141 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFV+ M+ +KL +AE GLHKVFKLQ++L +SM FD G L K+DT
Sbjct: 100 DYREYHTDTTVKFVIKMTEEKLAEAERVGLHKVFKLQSSLTCNSMVLFDHVGCLKKYDTV 159
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 160 LDILRDFFELRLKYYGLRKEWLLGMLGAESSKLNNQARFILEKIDGKIVIENKPKKELIK 219
Query: 339 ELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 220 VLIQRGYDSDPVKAWKEAQQK 240
>gi|50291033|ref|XP_447949.1| hypothetical protein [Candida glabrata CBS 138]
gi|51338747|sp|O93794.2|TOP2_CANGA RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
II
gi|49527260|emb|CAG60900.1| unnamed protein product [Candida glabrata]
Length = 1406
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 117/178 (65%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS E EYFSN++ H F +D I +AFSKK D+RK WL R
Sbjct: 602 GLGTSTSPEIIEYFSNLDTHLKKFHALQGDDKDLIDLAFSKKKADDRKEWL--------R 653
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D T I ++F+NKELILFS DN RSIPS+ DG KPG RKVL+TC
Sbjct: 654 QYEPGTVLD----PTLNEIPISDFINKELILFSLADNVRSIPSVLDGFKPGQRKVLYTCF 709
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N E KVA LA +V++++AYHHGEQ+L+ TII +AQNFVG+NNI L+P G FGT
Sbjct: 710 KKNLTTEKKVANLAPAVSDYTAYHHGEQALVQTIIGMAQNFVGTNNIYFLKPNGAFGT 767
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 81/122 (66%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H +T +KF++ ++ +++ K G ++ FKL + +++ +M AFD G + K+D
Sbjct: 930 DMEEQHAET-IKFIIKLTDEEMTKTRKLGFYERFKLISPISLQNMVAFDYRGKIKKYDHV 988
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
++ILK+FY VRLEYY KRKDY+ G L EA KL+ Q +FI D L + N+ KK++I+
Sbjct: 989 HEILKDFYEVRLEYYQKRKDYMTGRLQWEAEKLSFQVKFIKMIIDKSLIVTNKPKKQLIS 1048
Query: 339 EL 340
EL
Sbjct: 1049 EL 1050
>gi|38453805|dbj|BAD02203.1| DNA topoisomerase II [Arthroderma fulvum]
Length = 1086
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 122/180 (67%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 586 GLGTSSTEDAQVYFQDLDRHLKQFHTLQDKEAELIELAFSKKKADERKEWL--------R 637
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ + ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 638 QFKPGTYLDH----SMDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTMF 693
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R+++KV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 694 KRNVRKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRL 753
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ M + KA +GL + FKL +A S+M AFD G +T+++T
Sbjct: 912 DYKDYNTHTNVHFIIQMEEKHMKKAVEEGLEEKFKLVKQIATSNMVAFDPEGRITRYETP 971
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ FYAVR++ Y KRK +L L + KL+NQARF+ DG L I +KK +I
Sbjct: 972 EDILRAFYAVRIKLYEKRKQHLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKALLIQ 1031
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1032 ELQEKGFKPFP 1042
>gi|38453801|dbj|BAD02201.1| DNA topoisomerase II [Arthroderma incurvatum]
Length = 1086
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 122/180 (67%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 586 GLGTSSTEDAQVYFQDLDRHLKQFHTLQDKEAELIELAFSKKKADERKEWL--------R 637
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ + ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 638 QFKPGTYLDH----SMDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTMF 693
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R+++KV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 694 KRNVRKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRL 753
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 79/131 (60%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ M + KA +GL + FKL +A S+M AFD G +T+++T
Sbjct: 912 DYKDYNTHTNVHFIIQMDEKHMKKAVEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETP 971
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ FY VR++ Y KRK +L L + KL+NQARF+ DG L I +KK +I
Sbjct: 972 EDILRAFYTVRIKLYEKRKQHLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKAILIE 1031
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1032 ELQEKGFKPFP 1042
>gi|301626919|ref|XP_002942632.1| PREDICTED: DNA topoisomerase 2-alpha, partial [Xenopus (Silurana)
tropicalis]
Length = 1458
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 85/139 (61%), Positives = 107/139 (76%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTDTTVKFVV ++ KL +AE GLHKVFKLQT L +SM FD G L K++T
Sbjct: 899 DYKEYHTDTTVKFVVKLTEQKLMEAEAAGLHKVFKLQTPLTCNSMVLFDHVGCLRKYETA 958
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+EF+ +RL+YY+ RKD+L G+L AEA +L+NQARFI+EK +G + IEN+ KKE+I
Sbjct: 959 TDILREFFVLRLKYYSLRKDWLVGMLTAEASRLSNQARFILEKIEGKIVIENKPKKELIQ 1018
Query: 339 ELIKRKYDSDPVKSWKMKQ 357
L++R YDSDPVKSWK Q
Sbjct: 1019 MLVQRGYDSDPVKSWKQTQ 1037
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 73/90 (81%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKEAKEYFS+MERHRI FKY G DDA I +AFS+K VD+RK WLT +M++ R
Sbjct: 612 GLGTSTSKEAKEYFSDMERHRIPFKYEGPIDDAAITLAFSRKKVDDRKEWLTNFMQDRRE 671
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELI 100
R+ G+ E+YLY K+TK +T+ +F+NKEL+
Sbjct: 672 RRLHGLPEEYLYGKSTKYLTFNDFINKELM 701
>gi|449304612|gb|EMD00619.1| hypothetical protein BAUCODRAFT_144266 [Baudoinia compniacensis
UAMH 10762]
Length = 1725
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 118/180 (65%), Gaps = 11/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +K+A+ YF+++++H F D + + +AFSKK D RK WL ++
Sbjct: 725 GLGTSDTKDAQIYFADLDKHLKRFHKIQDGEPELLELAFSKKKADARKQWLQEFVPGT-- 782
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
YL T ITY F+NKELILFS DN RSIPS+ DG KPG RKVL+TC
Sbjct: 783 ---------YLDMSGTDDITYDSFINKELILFSMADNVRSIPSVIDGFKPGQRKVLYTCF 833
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN +++VKV +LAGSV+ +AY +GE S+ TI+ LAQNFVGSNN+N L+P G FG+ L
Sbjct: 834 RRNLKKDVKVVELAGSVSGLTAYAYGEASMQGTIVGLAQNFVGSNNMNCLEPSGNFGSRL 893
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 1/124 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY EY+T V F++ M +K +++ L FKL +A S++ AFD +G + K+ T
Sbjct: 1056 DYVEYNTPERVHFIIKME-EKSMQSDEGKLADFFKLSKPMATSNLVAFDAHGRIHKYATP 1114
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I++EFY VRL+ Y KRK ++ + E KL+NQARF+ DG L + +KK ++A
Sbjct: 1115 LDIMEEFYQVRLQMYQKRKQHMLAEMQRELEKLSNQARFVKMIIDGKLVVSKKKKAVLVA 1174
Query: 339 ELIK 342
EL K
Sbjct: 1175 ELQK 1178
>gi|156063624|ref|XP_001597734.1| hypothetical protein SS1G_01930 [Sclerotinia sclerotiorum 1980]
gi|154697264|gb|EDN97002.1| hypothetical protein SS1G_01930 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1846
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 119/180 (66%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +++A+ YFSN++ H F+ ++ + +AFSKK D RKTWL ++
Sbjct: 745 GLGTSKAEDAQIYFSNLDVHLREFEVIKPEEEEMLDLAFSKKKADSRKTWLGNFVPGT-- 802
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
YL T K +TY F+NKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 803 ---------YL-DHTDKMLTYDNFINKELILFSMADNLRSIPSVIDGLKPGQRKVMYACF 852
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN ++KV +LAG V++ SAYHHGE S+ TI+ LAQNFVGSNN+N L+P G FG+ L
Sbjct: 853 KRNLTNDMKVVELAGYVSQVSAYHHGEASMQMTIVGLAQNFVGSNNVNCLEPSGNFGSRL 912
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 75/131 (57%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE++ TV ++ M + A ++GL + FKL T+A S++ AFD G + K++
Sbjct: 1079 DYKEFNDHKTVHMIIQMDDKHMKAALVEGLAEKFKLNKTVATSNLVAFDHRGQIRKYEKV 1138
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+EFY R + Y RK Y L E KLTNQARF+ E + L + +KK ++A
Sbjct: 1139 EDILEEFYEQRFKMYTVRKAYWVNKLNVEYRKLTNQARFVTEIIENKLIVSKKKKPVLVA 1198
Query: 339 ELIKRKYDSDP 349
EL KR Y+ P
Sbjct: 1199 ELRKRGYEGFP 1209
>gi|71018835|ref|XP_759648.1| hypothetical protein UM03501.1 [Ustilago maydis 521]
gi|46099406|gb|EAK84639.1| hypothetical protein UM03501.1 [Ustilago maydis 521]
Length = 1518
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 115/181 (63%), Gaps = 12/181 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS S++AK YF +E+H++ F + D D I +AF+KK D+RK WL R
Sbjct: 699 GLGTSESQDAKRYFRALEKHKLAFDVTRDGDRELIDLAFNKKKADDRKEWL--------R 750
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ G D+ T I Y +F+NKELILFS DN RSIPS DGLKPG RKV++
Sbjct: 751 QFRPGTYLDH----NTDRIPYADFINKELILFSMADNLRSIPSAIDGLKPGQRKVMYVMF 806
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
R E+KV L G+V +AYHHGE +L TI+ LAQNFVGSNN+NLL+P GQFGT L
Sbjct: 807 DRKSNSELKVNTLVGNVLGQAAYHHGEAALSMTIVGLAQNFVGSNNVNLLEPRGQFGTRL 866
Query: 191 F 191
Sbjct: 867 L 867
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 79/131 (60%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHT++TV F+V ++ + G+ FKL ++ ++M FD+ G + K+ +
Sbjct: 1027 DYKEYHTESTVNFIVELTAKGQAEIADKGVEAFFKLSCQISTTNMVLFDQDGKIKKYTSA 1086
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL+EFY +RL YY KRK+YL L KL+NQARF+ L + NRK+ +++A
Sbjct: 1087 EEILEEFYLLRLSYYQKRKEYLVDQLKLMYDKLSNQARFVQMIISRQLVVSNRKRADIVA 1146
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1147 ELRQKDFRPFP 1157
>gi|25006387|dbj|BAC24013.1| DNA topoisomerase II [Arthroderma otae]
Length = 1087
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 124/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF ++++H F D + I +AFSKK DERK WL R
Sbjct: 589 GLGTSSTEDAQIYFQDLDKHLKQFHTLQDKEAELIELAFSKKKADERKEWL--------R 640
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +T+ ITY++F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 641 QFKPGTYLDH----STEQITYSDFINKELILFSMADNIRSIPSVIDGLKPGQRKVLYTMF 696
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R+++KV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 697 KRNVRKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRL 756
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ M + KA +GL + FKL +A S+M AFD G +T+++T
Sbjct: 915 DYKDYNTHTNVHFIIQMDEKHMKKALEEGLEEKFKLIKPIATSNMVAFDAEGRITRYETP 974
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ FYAVR++ Y +RK +L L ++ KL+NQARF+ DG L I +KK +I
Sbjct: 975 EDILQAFYAVRIKLYERRKQHLLSQLQSQLDKLSNQARFVQMIIDGKLVISKKKKTILIQ 1034
Query: 339 ELIKRKYDSDP 349
EL + + P
Sbjct: 1035 ELKDKAFKPFP 1045
>gi|10281014|dbj|BAB13748.1| type II DNA topoisomerase [Issatchenkia orientalis]
Length = 804
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 116/178 (65%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+++E +EYF+ +++H F D D + I +AFSKK D+RK WL +
Sbjct: 591 GLGTSSAQEMREYFTQLDKHLKRFDALRDEDKSSIDLAFSKKKADDRKEWLRNYQPGT-- 648
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
YL T I +EF+NKELILFS DN RSI S+ DG KP RK+L+ C
Sbjct: 649 ---------YL-DSTLSDIPISEFINKELILFSMADNVRSIASVMDGFKPVQRKILYACY 698
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN R E+KV+QL G +AEH+ YHHG+ SLM +II LAQ+FVGSNNINLL P G FG+
Sbjct: 699 KRNLRDEIKVSQLEGYIAEHTGYHHGDASLMQSIIGLAQDFVGSNNINLLVPHGGFGS 756
>gi|121700316|ref|XP_001268423.1| DNA topoisomerase II [Aspergillus clavatus NRRL 1]
gi|119396565|gb|EAW06997.1| DNA topoisomerase II [Aspergillus clavatus NRRL 1]
Length = 1735
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 122/180 (67%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF +++RH F D++ I +AFSKK DERK WL R
Sbjct: 717 GLGTSTTEDAQVYFRDLDRHLKEFHTLQDHETELIELAFSKKKADERKEWL--------R 768
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ K ITYT+F+NKELILFS DN+RSIPS+ DGLKPG RKVL+
Sbjct: 769 QFKPGTFLDHSVAK----ITYTDFINKELILFSMADNQRSIPSVIDGLKPGQRKVLYVSF 824
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN ++++KV +LAG V+ +AY HG+ SL TI+ LAQ FVGSNN+N L+P G FG+ L
Sbjct: 825 RRNLKKDMKVVELAGHVSGMTAYQHGDASLQQTIVGLAQTFVGSNNVNCLEPSGNFGSRL 884
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 83/131 (63%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V+FV+ M + A +GL + FKL T+A +++ AFD G +TK+ +
Sbjct: 1044 DYKDYNTHTKVRFVIQMDEKHMQSALSEGLEEKFKLSKTIATTNLVAFDPEGRITKYASV 1103
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ ILKEF+ VRL++Y +RK Y L E KL+NQARF+ DG L I +KK +IA
Sbjct: 1104 DDILKEFFTVRLKFYERRKQYQLSELQRELDKLSNQARFVQMIIDGALVISKKKKPVLIA 1163
Query: 339 ELIKRKYDSDP 349
EL ++ + + P
Sbjct: 1164 ELKEKGFKAIP 1174
>gi|358422130|ref|XP_002703368.2| PREDICTED: DNA topoisomerase 2-beta, partial [Bos taurus]
Length = 878
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 234 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 293
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 294 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 353
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 354 QMLVQRGYESDPVKAW 369
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 64/73 (87%), Positives = 67/73 (91%)
Query: 118 LKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNI 177
KPG RKVLFTC KRND+REVKVAQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNI
Sbjct: 1 FKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNI 60
Query: 178 NLLQPIGQFGTFL 190
NLLQPIGQFGT L
Sbjct: 61 NLLQPIGQFGTRL 73
>gi|453086165|gb|EMF14207.1| type II DNA topoisomerase [Mycosphaerella populorum SO2202]
Length = 1718
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 123/180 (68%), Gaps = 11/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +++A+ YF++++RH F D+++ I +AFSKK D RKTWL ++
Sbjct: 733 GLGTSDTRDAQIYFNDLDRHLKRFHEMQDHEEELIDLAFSKKRADARKTWLQGFVPGT-- 790
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
YL +T ITY +F+NKELILFS DN RSIPS+ DGLKPG RKV++T
Sbjct: 791 ---------YLDMSSTDDITYDDFINKELILFSMADNLRSIPSVIDGLKPGQRKVMYTAF 841
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN ++++KV +LAG V+ +AY +G+ SL TI+ LAQNFVGSNN+N+L+P G FG+ L
Sbjct: 842 RRNLKKDIKVVELAGLVSGLTAYAYGDASLQQTIVALAQNFVGSNNMNILEPSGNFGSRL 901
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY EY+T TV F++ M L + E L ++FKL T A S++ AFD++G + K+ TT
Sbjct: 1065 DYTEYNTPETVHFIIKMDEKILQENE-SKLEELFKLSKTQATSNLVAFDQHGRIHKYATT 1123
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDG 324
I++EFY R + Y +RK + +G E LKL NQA F+ DG
Sbjct: 1124 LDIMEEFYLHRHDAYIERKRMMLEKMGQELLKLNNQAMFVKMIIDG 1169
>gi|330924028|ref|XP_003300481.1| hypothetical protein PTT_11728 [Pyrenophora teres f. teres 0-1]
gi|311325363|gb|EFQ91408.1| hypothetical protein PTT_11728 [Pyrenophora teres f. teres 0-1]
Length = 1723
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 119/180 (66%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +A+ YF +++ H F+ + ++ I +AFSKK D RK WL ++
Sbjct: 736 GLGTSDIPDAQVYFKDLDTHMKRFQVMREEEEKLIELAFSKKKADARKDWLRDFVP---- 791
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G D TT I+Y +FVNKELILFS DN RSIPS+ DGLKPG RKVL+TC
Sbjct: 792 ----GQHLDL----TTPDISYDDFVNKELILFSMADNVRSIPSVIDGLKPGQRKVLYTCF 843
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN +++VKV +LAGSV+ + Y HGE S+ TI+NLAQNFVG+NNIN L+P G FG+ L
Sbjct: 844 RRNIKKDVKVVELAGSVSGSTDYAHGEASMQGTIVNLAQNFVGTNNINFLEPSGNFGSRL 903
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 73/124 (58%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY +Y+T V F++ M + +A GL + FKL + S++ AFD +G + K+ T
Sbjct: 1067 DYIDYNTPDRVHFIIKMEDKYMAEAVTKGLEEYFKLFKPQSTSNLVAFDAHGRIHKYATV 1126
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I++EFY VRL YY KRK + V+ E LK+TNQA+FI DG L + +KK ++
Sbjct: 1127 LDIIEEFYHVRLRYYEKRKQHQLQVMEKEHLKMTNQAKFIQMIIDGKLIVSKKKKAVLVQ 1186
Query: 339 ELIK 342
EL K
Sbjct: 1187 ELKK 1190
>gi|404646|gb|AAC52136.1| DNA topoisomerase IIalpha/novel coding sequence fusion, partial
[Mus musculus]
Length = 241
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/142 (59%), Positives = 109/142 (76%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
DY+EYHTDTTVKFV+ M+ +KL +AE GLHKVFKLQ++L +SM FD G L K+DT
Sbjct: 16 TDYREYHTDTTVKFVIKMTEEKLAEAERVGLHKVFKLQSSLTCNSMVLFDHVGCLKKYDT 75
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
IL++F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 76 VLDILRDFFELRLKYYGLRKEWLLGMLGAESSKLNNQARFILEKIDGKIVIENKPKKELI 135
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
LI+R YDSDPVK+WK Q K
Sbjct: 136 KVLIQRGYDSDPVKAWKEAQQK 157
>gi|315047873|ref|XP_003173311.1| hypothetical protein MGYG_03483 [Arthroderma gypseum CBS 118893]
gi|311341278|gb|EFR00481.1| hypothetical protein MGYG_03483 [Arthroderma gypseum CBS 118893]
Length = 1672
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 122/180 (67%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 717 GLGTSSTEDAQVYFQDLDRHLKQFHTLQDKEAELIELAFSKKKADERKEWL--------R 768
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ + ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 769 QFKPGTYLDH----SMDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTMF 824
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN ++++KV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 825 KRNVKKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRL 884
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ M + KA +GL + FKL +A S+M AFD G +T+++T
Sbjct: 1043 DYKDYNTHTNVHFIIQMEEKHMKKAVEEGLEEKFKLVKPIATSNMVAFDAEGRITRYETP 1102
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ FYAVR++ Y KRK +L L + KL+NQARF+ DG L I +KK +I
Sbjct: 1103 EDILRAFYAVRIKLYEKRKQHLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKALLIQ 1162
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1163 ELQEKGFKPFP 1173
>gi|38305350|gb|AAR16193.1| antigen MLAA-44 [Homo sapiens]
Length = 373
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 105/136 (77%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTDTTVKFVV M+ +KL +AE GLHKVFKLQTTL +SM FD G L K++T
Sbjct: 134 SDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYET 193
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
ILKEF+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I
Sbjct: 194 VQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLI 253
Query: 338 AELIKRKYDSDPVKSW 353
L++R Y+SDPVK+W
Sbjct: 254 QMLVQRGYESDPVKAW 269
>gi|213407866|ref|XP_002174704.1| DNA topoisomerase [Schizosaccharomyces japonicus yFS275]
gi|212002751|gb|EEB08411.1| DNA topoisomerase [Schizosaccharomyces japonicus yFS275]
Length = 1499
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 115/178 (64%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +K+ KEYFS ++RH F D ++ I MAFSKK D RK WL T+
Sbjct: 655 GLGTSDAKDMKEYFSALDRHIKQFHTIQDGENDLIDMAFSKKKADVRKEWLRTY------ 708
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G+ D+ + I F+N+ELILFS DN RSIPS+ DGLKPG RKV++
Sbjct: 709 --HPGLYIDH----SQPVIEIKNFINQELILFSMADNIRSIPSVVDGLKPGQRKVIYGMF 762
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N + E KV QLAG ++E +AYHHGE SL TII LA NFVGSNNINLL P GQFG+
Sbjct: 763 KKNLKNEAKVEQLAGYISEQTAYHHGETSLQQTIIGLAHNFVGSNNINLLLPKGQFGS 820
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 79/131 (60%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY EYHT+ V F V ++ + + A +GL FK+ TLA S+M AFD G + K+D+
Sbjct: 982 DYTEYHTEENVHFRVKLTKEGMATALAEGLENKFKVARTLATSNMVAFDPQGRIRKYDSA 1041
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILKEFY VRL YY +RK++L L K++NQARFI +G L + +K+ ++
Sbjct: 1042 YDILKEFYEVRLRYYQRRKEHLVNDLETVYTKISNQARFIHMIIEGTLVVAKKKRSVLVQ 1101
Query: 339 ELIKRKYDSDP 349
EL ++ + + P
Sbjct: 1102 ELREKGFKAIP 1112
>gi|38453803|dbj|BAD02202.1| DNA topoisomerase II [Arthroderma gypseum]
Length = 1086
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 122/180 (67%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 586 GLGTSSTEDAQVYFQDLDRHLKQFHTLQDKEAELIELAFSKKKADERKEWL--------R 637
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ + ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 638 QFKPGTYLDH----SMDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTMF 693
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN ++++KV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 694 KRNVKKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRL 753
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ M + KA +GL + FKL +A S+M AFD G +T+++T
Sbjct: 912 DYKDYNTHTNVHFIIQMEEKHMKKAVEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETP 971
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ FYAVR++ Y KRK +L L + KL+NQARF+ DG L I +KK +I
Sbjct: 972 EDILRAFYAVRIKLYEKRKQHLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKALLIQ 1031
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1032 ELQEKGFKPFP 1042
>gi|402082870|gb|EJT77888.1| DNA topoisomerase 2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1699
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 121/182 (66%), Gaps = 12/182 (6%)
Query: 9 IAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEEC 68
+ GLGTS++++A+ YF++++RH F + +AFSKK D RK WL ++
Sbjct: 728 LKGLGTSSNEDAQVYFTDLDRHLKEFDTMKPQEVDLFELAFSKKKADARKEWLGNFVPGT 787
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
YL +TK+++YT+FVNKELILFS DN RSIPS+ DGLKPG RKV+F
Sbjct: 788 -----------YL-DNSTKSVSYTDFVNKELILFSMADNMRSIPSVVDGLKPGQRKVIFA 835
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN ++ KV +LAG V+E +AYHHGE SL TI+ LAQNFVGSNN+N L+P G FG+
Sbjct: 836 SFKRNLVKDKKVVELAGFVSEVAAYHHGEASLQQTIVGLAQNFVGSNNVNCLEPSGNFGS 895
Query: 189 FL 190
L
Sbjct: 896 RL 897
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 81/143 (56%), Gaps = 1/143 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE++ V F++ + + A +GL + FKL +A +++ AFD G++ K++
Sbjct: 1065 DYKEFNDHRNVHFIIQLEEKHMQIALKEGLLEKFKLLKNIATTNLVAFDTNGMIRKYEKV 1124
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+E+Y R Y +RK + V A+ KL NQ RFI E +G L + +KK ++
Sbjct: 1125 EDILEEYYHYRFNMYTERKAHWLKVYHADYRKLKNQYRFISEIIEGKLVVSKKKKVVLVQ 1184
Query: 339 ELIKRKYDSDPVKSWKMKQNKEN 361
EL RKY++ P K+ K+ KE+
Sbjct: 1185 ELRDRKYEAFP-KTEAAKRAKED 1206
>gi|25006389|dbj|BAC24014.1| DNA topoisomerase II [Arthroderma gypseum]
Length = 1091
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 122/180 (67%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F D + I +AFSKK DERK WL R
Sbjct: 589 GLGTSSTEDAQVYFQDLDRHLKQFHTLQDKEAELIELAFSKKKADERKEWL--------R 640
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ + ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+T
Sbjct: 641 QFKPGTYLDH----SMDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTMF 696
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN ++++KV +LAG V+ +AY HG+ SL +TI+ LAQ FVGSNNIN L+P G FG+ L
Sbjct: 697 KRNVKKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRL 756
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V F++ M + KA +GL + FKL +A S+M AFD G +T+++T
Sbjct: 915 DYKDYNTHTNVHFIIQMEEKHMKKAVEEGLEEKFKLVKPIATSNMVAFDAEGRITRYETP 974
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ FYAVR++ Y KRK +L L + KL+NQARF+ DG L I +KK +I
Sbjct: 975 EDILRAFYAVRIKLYEKRKQHLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKALLIQ 1034
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1035 ELQEKGFKPFP 1045
>gi|154297045|ref|XP_001548951.1| hypothetical protein BC1G_12611 [Botryotinia fuckeliana B05.10]
gi|347838482|emb|CCD53054.1| hypothetical protein [Botryotinia fuckeliana]
Length = 1823
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 118/180 (65%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++A+ YFSN++ H F+ ++ + +AFSKK D RKTWL +
Sbjct: 740 GLGTSKPEDAQIYFSNLDVHLREFETIKPEEEEMLDLAFSKKKADSRKTWLGNF------ 793
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
I YL T K +TY F+NKELILFS DN RSIPS+ DGLKPG RKV++ C
Sbjct: 794 -----IPGTYL-DHTDKMLTYDNFINKELILFSMADNMRSIPSVIDGLKPGQRKVMYACF 847
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN ++KV +LAG V++ SAYHHGE S+ TI+ LAQNFVGSNN+N L+P G FG+ L
Sbjct: 848 KRNLINDMKVVELAGYVSQISAYHHGEASMQMTIVGLAQNFVGSNNVNCLEPSGNFGSRL 907
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 75/131 (57%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE++ V ++ M + +A +GL + FKL T+A S++ AFD G + K+D
Sbjct: 1074 DYKEFNDHKNVHMIIQMDDKHMKEALKEGLAEKFKLNKTVATSNLVAFDHRGQIRKYDKV 1133
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+EFY RL+ Y RK + L E KLTNQARF+ E + L + +KK ++A
Sbjct: 1134 EDILEEFYEQRLKMYTVRKAHWMKKLNVEYRKLTNQARFVTEIIENKLIVSKKKKPVLVA 1193
Query: 339 ELIKRKYDSDP 349
EL KR Y+ P
Sbjct: 1194 ELRKRGYEGFP 1204
>gi|361127443|gb|EHK99411.1| putative DNA topoisomerase 2 [Glarea lozoyensis 74030]
Length = 1656
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 120/180 (66%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++A+ YFSN+++H F+ ++ + + F+KK D RK WL +M
Sbjct: 704 GLGTSLPEDAQVYFSNLDQHLREFESITHEEEGMLDLVFNKKQADNRKRWLGNFMP---- 759
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G D+ +TK +TY +F+NKELILFS DN RSIPS+ DG KPG RKV++ C
Sbjct: 760 ----GTFLDH----STKTLTYNDFINKELILFSMADNIRSIPSVIDGFKPGQRKVMYACF 811
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +++KV +L G V+E++AYHHGE S+ TII LAQNFVGSNNIN L+P G FG+ L
Sbjct: 812 KRNLVKDMKVVELGGYVSENTAYHHGETSMHMTIIGLAQNFVGSNNINCLEPSGNFGSRL 871
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 78/131 (59%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEY+ +V F+V + + + DGL + FKL T+A S++ AFD G + K++T
Sbjct: 1039 DYKEYNDHKSVNFIVQLDEKNMKGVKEDGLAERFKLNKTIATSNLVAFDTNGQIRKYETV 1098
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+L+E+Y RL Y KRK+Y + E KL NQARF++E D L + +KK ++A
Sbjct: 1099 EAVLEEYYVYRLAMYTKRKEYWVKKINIEYRKLKNQARFVLEIIDNKLVVSKKKKPVLVA 1158
Query: 339 ELIKRKYDSDP 349
EL K Y++ P
Sbjct: 1159 ELRKANYEAFP 1169
>gi|156848882|ref|XP_001647322.1| hypothetical protein Kpol_1002p113 [Vanderwaltozyma polyspora DSM
70294]
gi|156118007|gb|EDO19464.1| hypothetical protein Kpol_1002p113 [Vanderwaltozyma polyspora DSM
70294]
Length = 1404
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 116/178 (65%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +E +EYF++++RH +F ++D I +AFSKK D+RK WL R
Sbjct: 603 GLGTSLGQEFREYFADLDRHLKIFHQLQEDDKKLIELAFSKKKADDRKEWL--------R 654
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D AI ++F+NKELILFS DN RSIPS+ DG KPG RKVLF C
Sbjct: 655 QYEPGTVLD----PNLDAIPISDFINKELILFSLADNVRSIPSVLDGFKPGQRKVLFCCF 710
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K N E+KV LA V+E ++YHHGE+SL TI+ LAQNFVG+NNI LL+P G FG+
Sbjct: 711 KINLTYEIKVGTLAAKVSEKTSYHHGEESLQQTIVGLAQNFVGTNNIYLLKPAGSFGS 768
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 77/122 (63%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E HT+ ++F++T++P+++ K + G++ FKL + + + +M AFD +G + K+DT
Sbjct: 931 DMEEQHTND-IRFIITLTPEEMAKTKKIGVYDRFKLVSQVNLKNMVAFDAHGKIRKYDTV 989
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL EFY VRLE+Y KRKDY+ L K++ Q +F+ D + + N+ KK ++
Sbjct: 990 LDILTEFYYVRLEFYQKRKDYMSQKLQWTVEKISFQVKFLKMIIDKEYTVSNKAKKIIMK 1049
Query: 339 EL 340
EL
Sbjct: 1050 EL 1051
>gi|67538472|ref|XP_663010.1| hypothetical protein AN5406.2 [Aspergillus nidulans FGSC A4]
gi|40743376|gb|EAA62566.1| hypothetical protein AN5406.2 [Aspergillus nidulans FGSC A4]
gi|259485149|tpe|CBF81963.1| TPA: DNA topoisomerase 2 (EC 5.99.1.3)
[Source:UniProtKB/TrEMBL;Acc:O59864] [Aspergillus
nidulans FGSC A4]
Length = 1709
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 117/180 (65%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+++EA+EYF +++RH F D + I +AFSKK V+ERK WL +
Sbjct: 707 GLGTSSTEEAQEYFRDLDRHLKEFHVMQDKEHELIELAFSKKKVEERKEWLRQY------ 760
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
D + I+YT+F+N ELI FS DN RSIPS+ DG+KPG RKV++T +
Sbjct: 761 ------NPDTFMDHSVAKISYTDFINNELIQFSMADNLRSIPSMVDGMKPGQRKVMYTVM 814
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +++VKV L G V +AYHHG+ S+ TII LAQ+FVGSNN+N L+P G FG+ L
Sbjct: 815 KRNIKKDVKVLDLTGQVFSLTAYHHGDASMHQTIIGLAQDFVGSNNVNTLEPSGNFGSRL 874
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKA-EMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
DYK+Y+T++ V V+ + + + + L + FKL T+A +++ AF+ G +TK+
Sbjct: 1034 DYKDYNTNSDVHLVLQLDEKNVKEPLTQEFLEEKFKLSKTIATTNLVAFNAEGQMTKYPN 1093
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGD 325
IL+EFY +RL++Y KRK + L E KLTNQARF+ DGD
Sbjct: 1094 VEAILEEFYRLRLKFYGKRKQHQLDQLQIELEKLTNQARFVQMIIDGD 1141
>gi|55773630|dbj|BAA28664.2| typeII DNA topoisomerase [Emericella nidulans]
Length = 1709
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 117/180 (65%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+++EA+EYF +++RH F D + I +AFSKK V+ERK WL +
Sbjct: 707 GLGTSSTEEAQEYFRDLDRHLKEFHVMQDKEHELIELAFSKKKVEERKEWLRQY------ 760
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
D + I+YT+F+N ELI FS DN RSIPS+ DG+KPG RKV++T +
Sbjct: 761 ------NPDTFMDHSVAKISYTDFINNELIQFSMADNLRSIPSMVDGMKPGQRKVMYTVM 814
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +++VKV L G V +AYHHG+ S+ TII LAQ+FVGSNN+N L+P G FG+ L
Sbjct: 815 KRNIKKDVKVLDLTGQVFSLTAYHHGDASMHQTIIGLAQDFVGSNNVNTLEPSGNFGSRL 874
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKA-EMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
DYK+Y+T++ V V+ + + + + L + FKL T+A +++ AF+ G +TK+
Sbjct: 1034 DYKDYNTNSDVHLVLQLDEKNVKEPLTQEFLEEKFKLSKTIATTNLVAFNAEGQMTKYPN 1093
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGD 325
IL+EFY +RL++Y KRK + L E KLTNQARF+ DGD
Sbjct: 1094 VEAILEEFYRLRLKFYGKRKQHQLDQLQIELEKLTNQARFVHMIIDGD 1141
>gi|340521765|gb|EGR51999.1| predicted protein [Trichoderma reesei QM6a]
Length = 1619
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/186 (49%), Positives = 121/186 (65%), Gaps = 12/186 (6%)
Query: 5 HDVMIAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTW 64
H + GLG+S++++A+ YF+N++ H F + +AFSKK D RK WL +
Sbjct: 709 HYKYLKGLGSSSNEDAQVYFTNLDEHLKEFSVMKPEEAEMFDLAFSKKKADARKEWLGNF 768
Query: 65 MEECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRK 124
+ YL ++K ITY++FVNKELILFS DN RSIPS+ DGLKPG RK
Sbjct: 769 VPGT-----------YL-DHSSKVITYSDFVNKELILFSMADNIRSIPSMIDGLKPGQRK 816
Query: 125 VLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIG 184
VL+ C KRN ++ KV +LAG V+ +AYHHGE SL TII LAQ+FVGSNNIN+L+P G
Sbjct: 817 VLYACFKRNVVKDEKVVELAGYVSGLTAYHHGEASLQQTIIGLAQDFVGSNNINVLEPSG 876
Query: 185 QFGTFL 190
FG+ L
Sbjct: 877 NFGSRL 882
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 84/141 (59%), Gaps = 1/141 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE++ TV F + + + K +GL + FKL +A S++ AF+ G + K++
Sbjct: 1052 DYKEFNDHKTVHFEIQVDEKHMPKVLEEGLLERFKLTKQVATSNLVAFNTNGQIRKYEKV 1111
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+E+Y RLE Y KRK++ V A+ KL NQARFI E DGDL + ++K ++
Sbjct: 1112 EDILEEYYVYRLEMYLKRKNHWLAVYDADHRKLKNQARFIQEIIDGDLIVGKKRKDVLVK 1171
Query: 339 ELIKRKYDS-DPVKSWKMKQN 358
EL RKY++ PVK+ K++
Sbjct: 1172 ELRDRKYEAFPPVKNANTKKS 1192
>gi|321472296|gb|EFX83266.1| hypothetical protein DAPPUDRAFT_315718 [Daphnia pulex]
Length = 711
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 127/181 (70%), Gaps = 1/181 (0%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLG+ TS+E + F+N+ HR++FK++GD+DD I MAFSK+ + + WL W + +
Sbjct: 159 GLGSMTSEEMESVFTNLPSHRVIFKHNGDDDDRAISMAFSKRHSGQHRDWLDFWNKASKW 218
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+E + +LY + T+ +++ EFV++ L+ ++NM++ER S+ DGL G RK++FTC+
Sbjct: 219 LRESPYPKLHLYRRETRHVSFYEFVHRGLVHYTNMEHERYTRSIMDGLTVGQRKIIFTCI 278
Query: 131 KRNDRREVKVAQLAGSVAEHSAY-HHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTF 189
KR D+ EV VAQLAG VA ++ ++ E++L TII LA +FVG+NNINLLQPIG FGT
Sbjct: 279 KRTDKEEVTVAQLAGLVAARTSLCNYDEENLTRTIIGLAHDFVGTNNINLLQPIGHFGTR 338
Query: 190 L 190
L
Sbjct: 339 L 339
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 91/144 (63%), Gaps = 3/144 (2%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTN 279
YKEYHTDTTV+FVV M+ +K+ +AE G H +F+LQ T ++ +D G L +D+ N
Sbjct: 502 YKEYHTDTTVRFVVNMTEEKMQQAESQGFHDLFRLQCTHTVTPTLLYDPNGFLKNYDSNN 561
Query: 280 QILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAE 339
ILK ++ VRL + +RK L G L A KLTN+ R++ +GDL I NRKK ++ E
Sbjct: 562 DILKTYFDVRLNLFEERKKLLTGELQASCKKLTNEIRYVHAIWNGDL-IVNRKKINVLVE 620
Query: 340 LIKR-KYDSDPVKSWKMKQNKENA 362
++R +D DP+++ +MK +N
Sbjct: 621 ELRRLNFDPDPLRA-RMKNQNDNV 643
>gi|189193341|ref|XP_001933009.1| DNA topoisomerase 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187978573|gb|EDU45199.1| DNA topoisomerase 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1722
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 119/180 (66%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +A+ YF +++ H F+ + ++ I +AFSKK D RK WL ++
Sbjct: 734 GLGTSDIPDAQIYFKDLDTHMKRFQVMREEEEKLIELAFSKKKADARKDWLRDFVP---- 789
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G D TT I+Y +FVNKELILFS DN RSIPS+ DGLKPG RKVL+TC
Sbjct: 790 ----GQHLDL----TTPDISYDDFVNKELILFSMADNVRSIPSVIDGLKPGQRKVLYTCF 841
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN +++VKV +LAGSV+ + Y HGE S+ TI+NLAQNFVG+NNIN L+P G FG+ L
Sbjct: 842 RRNIKKDVKVVELAGSVSGSTDYAHGEASMQGTIVNLAQNFVGTNNINYLEPSGNFGSRL 901
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 73/124 (58%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY +Y+T V F++ M + +A GL + FKL + S++ AFD +G + K+ T
Sbjct: 1065 DYIDYNTPDRVHFIIKMEDKYMAEAVTKGLEEYFKLFKPQSTSNLVAFDAHGRIHKYATV 1124
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I++EFY +RL YY KRK + V+ E LK+TNQA+FI DG L + +KK ++
Sbjct: 1125 LDIIEEFYHIRLRYYEKRKQHQLQVMEKEHLKMTNQAKFIQMIIDGKLTVSKKKKAVLVQ 1184
Query: 339 ELIK 342
EL K
Sbjct: 1185 ELKK 1188
>gi|397643397|gb|EJK75837.1| hypothetical protein THAOC_02435 [Thalassiosira oceanica]
Length = 1391
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/196 (50%), Positives = 120/196 (61%), Gaps = 30/196 (15%)
Query: 11 GLGTSTSKE---AKEYFSNMERHRILFKY----SGDNDDAH--------------IRMAF 49
GLGTSTS E +KEYFSN++ H I F GD DDA I MAF
Sbjct: 633 GLGTSTSSEGKTSKEYFSNLDIHEIHFNEISSDVGDVDDADMEVEDDFVTSGAGLIDMAF 692
Query: 50 SKKLVDERKTWLTTWMEECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNER 109
SK V+ERK WL R K+ + + T+ + Y+EF+NKEL+LFS DN R
Sbjct: 693 SKAKVEERKVWLN------RVEKDTFL---HYSNAQTRGVNYSEFINKELVLFSQYDNIR 743
Query: 110 SIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQ 169
SIP + DGLKP RKVLF C K+ + E+KVAQLAG + EHSAYHHGE SL T+I +AQ
Sbjct: 744 SIPHIMDGLKPSQRKVLFACFKKKLKNEIKVAQLAGYIGEHSAYHHGEMSLNGTVIGMAQ 803
Query: 170 NFVGSNNINLLQPIGQ 185
++ GSNNINLL P G+
Sbjct: 804 SYCGSNNINLLYPSGK 819
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 86/136 (63%), Gaps = 2/136 (1%)
Query: 216 ESNDYKEYHTDTTVKFVVTMSPDKLHKAEM--DGLHKVFKLQTTLAISSMCAFDRYGVLT 273
E +D+KE HTDTTV F VT + DK+ E DGLH FKL TT++ +M FD G +
Sbjct: 976 EISDFKENHTDTTVSFTVTTTKDKIDSFEKGKDGLHGKFKLSTTISTKNMTLFDDQGKIR 1035
Query: 274 KFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKK 333
++ T+ IL+ F+ RLE+Y KRK L +G E L N+ARF+ E C+ +L + NRK+
Sbjct: 1036 RYQTSVDILRTFFDHRLEFYVKRKGMLLEKMGRELSILENKARFVEEVCNEELVVSNRKR 1095
Query: 334 KEMIAELIKRKYDSDP 349
KE++ +L +R YD P
Sbjct: 1096 KELLHDLKERGYDLFP 1111
>gi|367012033|ref|XP_003680517.1| hypothetical protein TDEL_0C04170 [Torulaspora delbrueckii]
gi|359748176|emb|CCE91306.1| hypothetical protein TDEL_0C04170 [Torulaspora delbrueckii]
Length = 1400
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 116/178 (65%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+S+E + YFS+++RH F D I +AF+KK D+RK WL R
Sbjct: 603 GLGTSSSQEVRAYFSDLDRHLKKFHALEGGDQELIELAFAKKKADDRKEWL--------R 654
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D T+ I ++F+NKE ILFS DN RSIP++ DG KPG RKVL+ C
Sbjct: 655 QYEPGTVLDPNLTE----IPISDFINKEFILFSLADNIRSIPNILDGFKPGQRKVLYGCF 710
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
R ++KVAQLA VAE ++YHHGEQ+L TII LAQNFVGSNNINLL+P G FGT
Sbjct: 711 MRKMSTDIKVAQLAPFVAEKTSYHHGEQALAQTIIGLAQNFVGSNNINLLKPNGAFGT 768
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H+DT ++F++ ++ +++ K G + FKL +T+ +++M AF + K++
Sbjct: 931 DMEEQHSDT-IRFIIKLTQEEMDKTRKIGFFERFKLTSTINLNNMVAFTPSSKIRKYENV 989
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL+EFY RLEYY KRKDY+ L E KL+ Q RFI + +L + N+ K+++A
Sbjct: 990 GEILEEFYYTRLEYYQKRKDYMTSRLQWEVEKLSYQVRFIKMIIEKELTVTNKPHKQIVA 1049
Query: 339 EL 340
EL
Sbjct: 1050 EL 1051
>gi|3786306|dbj|BAA33955.1| TopoisomeraseII [Candida glabrata]
Length = 1406
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 116/178 (65%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS E EYFSN++ H F +D I +AFSKK D+RK WL R
Sbjct: 602 GLGTSTSPEIIEYFSNLDTHLKKFHALQGDDKDLIDLAFSKKKADDRKEWL--------R 653
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D T I ++F+NKELILFS DN SIPS+ DG KPG RKVL+TC
Sbjct: 654 QYEPGTVLD----PTLNEIPISDFINKELILFSLADNVSSIPSVLDGFKPGQRKVLYTCF 709
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N E KVA LA +V++++AYHHGEQ+L+ TII +AQNFVG+NNI L+P G FGT
Sbjct: 710 KKNLTTEKKVANLAPAVSDYTAYHHGEQALVQTIIGMAQNFVGTNNIYFLKPNGAFGT 767
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 81/122 (66%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H +T +KF++ ++ +++ K G ++ FKL + +++ +M AFD G + K+D
Sbjct: 930 DMEEQHAET-IKFIIKLTDEEMTKTRKLGFYERFKLISPISLQNMVAFDYRGKIKKYDHV 988
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
++ILK+FY VRLEYY KRKDY+ G L EA KL+ Q +FI D L + N+ KK++I+
Sbjct: 989 HEILKDFYEVRLEYYQKRKDYMTGRLQWEAEKLSFQVKFIKMIIDKSLIVTNKPKKQLIS 1048
Query: 339 EL 340
EL
Sbjct: 1049 EL 1050
>gi|296418623|ref|XP_002838930.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634913|emb|CAZ83121.1| unnamed protein product [Tuber melanosporum]
Length = 1612
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 116/180 (64%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++AK YFS++ERH F I +AFSKK DERK WL R
Sbjct: 612 GLGTSGERDAKLYFSDLERHVKEFHVMEAEGQRLIELAFSKKKADERKEWL--------R 663
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ G D+ K I+Y EFVNKELILFS DN RSIPS+ DGLKPG RK+LF C
Sbjct: 664 LYKPGTYLDHSIDK----ISYPEFVNKELILFSMADNIRSIPSVVDGLKPGQRKILFACF 719
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KR +++KV++L+G V+E +AY HGE SL TI +AQ FVGSNN+NLL+P G FGT L
Sbjct: 720 KRKLTKQLKVSELSGFVSECTAYQHGESSLQVTITGMAQTFVGSNNVNLLEPEGSFGTRL 779
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 83/129 (64%), Gaps = 1/129 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDK-LHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
DY +Y++ V F++TM +K + +A +GL FKL T+A S++ AFD G + K+ +
Sbjct: 937 DYVDYNSPRRVHFIITMESEKHMQEALAEGLVNRFKLTKTIATSNLVAFDPEGRINKYAS 996
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
N ILKEFY +RL+YY +RKD + + + +K TNQARF+ +L + RK+ E+I
Sbjct: 997 VNDILKEFYYIRLKYYQERKDNMLKEMSKQLMKYTNQARFVQMIIKKELAVSGRKRSEII 1056
Query: 338 AELIKRKYD 346
+L+K+K+D
Sbjct: 1057 EDLVKKKFD 1065
>gi|389628778|ref|XP_003712042.1| DNA topoisomerase 2 [Magnaporthe oryzae 70-15]
gi|351644374|gb|EHA52235.1| DNA topoisomerase 2 [Magnaporthe oryzae 70-15]
Length = 1686
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 122/182 (67%), Gaps = 12/182 (6%)
Query: 9 IAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEEC 68
+ GLG+S++++A+ YF++++ H F ++ +AFSKK D RK WL ++
Sbjct: 725 LKGLGSSSNEDAQVYFTDLDLHLKQFHTMKPDEIELFELAFSKKKADARKEWLGNFIP-- 782
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
G D+ +TK ITY++FVNKELILFS DN RSIPS+ DGLKPG RKV+F
Sbjct: 783 ------GTFLDH----STKQITYSDFVNKELILFSMADNMRSIPSMIDGLKPGQRKVIFA 832
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
C K+N ++ KV +LAG V+E +AYHHGE SL TII LAQN+VGSNN+N L+P G FG+
Sbjct: 833 CFKQNLVKDKKVVELAGYVSEKAAYHHGEASLQQTIIGLAQNYVGSNNVNCLEPSGNFGS 892
Query: 189 FL 190
L
Sbjct: 893 RL 894
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 78/135 (57%), Gaps = 6/135 (4%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEM----DGLHKVFKLQTTLAISSMCAFDRYGVLTK 274
DYKE++ V F++ + D+ H E + L + FKLQ +AI+++ AFD G + K
Sbjct: 1064 DYKEFNDHKNVHFIIQL--DEKHMKEFRDSPNLLLERFKLQKNVAITNLVAFDTNGQIRK 1121
Query: 275 FDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKK 334
+D IL+EFY RL YA RK + V A+ KLTNQ RFI E DG L + +KK
Sbjct: 1122 YDKVEDILEEFYHYRLNVYAARKAHWLRVFDADYRKLTNQYRFISEIIDGKLVVSKKKKS 1181
Query: 335 EMIAELIKRKYDSDP 349
++ EL +RKY+ P
Sbjct: 1182 VLVQELRQRKYEPFP 1196
>gi|384493528|gb|EIE84019.1| hypothetical protein RO3G_08724 [Rhizopus delemar RA 99-880]
Length = 1330
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 114/178 (64%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS A+EYFSN+ H+ F+ D I MAF+KK +RK WL +
Sbjct: 750 GLGTSDKTAAREYFSNLPVHQKEFQTMDTEDRQLIDMAFNKKKASDRKEWLVQY------ 803
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E GI D+ K I ++FVN+EL+LFS DN RSIPS+ DG KP RKVL+ C+
Sbjct: 804 --EPGIYIDHSVNK----IKISDFVNRELLLFSMADNIRSIPSMVDGFKPAQRKVLYGCI 857
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN EVKVAQLA VA + YHHGE S+ STIIN+AQ FVGSNNIN+L P GQFG+
Sbjct: 858 KRNKNTEVKVAQLANYVAGVTQYHHGEASVASTIINMAQEFVGSNNINVLVPSGQFGS 915
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 71/121 (58%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTN 279
+K TD V F +++ L KAE G+ K+ +++ +++ FD+ G + K+
Sbjct: 1083 FKNNSTDVAVNFTISLDEANLKKAEDMGVLNALKITSSINTTNIVCFDKDGKIRKYSGPE 1142
Query: 280 QILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAE 339
+ILKEFY +RLEYY KRK++L VL E +L N+A+FI + L NR + ++IA+
Sbjct: 1143 EILKEFYELRLEYYIKRKEHLIYVLKDEYDRLDNKAKFIDLVIEKKLNHINRNEDDLIAD 1202
Query: 340 L 340
+
Sbjct: 1203 M 1203
>gi|7388329|sp|Q9Y8G8.1|TOP2_PENCH RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
II
gi|5441259|dbj|BAA82356.1| type II DNA topoisomerase [Aspergillus terreus]
Length = 1587
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 121/180 (67%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF +++RH F DN+ I +AFSKK DERK + R
Sbjct: 655 GLGTSTTEDAQIYFRDLDRHLKEFHTMQDNEVELIELAFSKKKADERKGNV--------R 706
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ G D+ K ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+TC
Sbjct: 707 QFRPGTFLDHSVDK----ITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTCF 762
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN ++++KV +LAG V+ +AY HGE SL TI+ LAQ FVGSNN+N L+P G FG+ L
Sbjct: 763 RRNLKKDMKVVELAGHVSGTTAYQHGEGSLQQTIVGLAQTFVGSNNVNCLEPSGNFGSRL 822
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 79/131 (60%), Gaps = 1/131 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T V FV+ M + A +GL + FKL T+ +++ AFD + TK+ +
Sbjct: 982 DYKDYNTHTKVHFVIQMDEKHMKTAIAEGLEEKFKLSKTMTTTNLVAFDPERI-TKYASV 1040
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I+KEFYAVRL+YY +RK Y + E KL+NQARF+ DG L I +KK ++A
Sbjct: 1041 EDIMKEFYAVRLKYYERRKQYQLSEMQKELDKLSNQARFVQMIIDGKLVISKKKKAVLVA 1100
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1101 ELKEKDFKPFP 1111
>gi|440474068|gb|ELQ42835.1| DNA topoisomerase 2 [Magnaporthe oryzae Y34]
gi|440485894|gb|ELQ65810.1| DNA topoisomerase 2 [Magnaporthe oryzae P131]
Length = 1680
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 122/182 (67%), Gaps = 12/182 (6%)
Query: 9 IAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEEC 68
+ GLG+S++++A+ YF++++ H F ++ +AFSKK D RK WL ++
Sbjct: 725 LKGLGSSSNEDAQVYFTDLDLHLKQFHTMKPDEIELFELAFSKKKADARKEWLGNFIP-- 782
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
G D+ +TK ITY++FVNKELILFS DN RSIPS+ DGLKPG RKV+F
Sbjct: 783 ------GTFLDH----STKQITYSDFVNKELILFSMADNMRSIPSMIDGLKPGQRKVIFA 832
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
C K+N ++ KV +LAG V+E +AYHHGE SL TII LAQN+VGSNN+N L+P G FG+
Sbjct: 833 CFKQNLVKDKKVVELAGYVSEKAAYHHGEASLQQTIIGLAQNYVGSNNVNCLEPSGNFGS 892
Query: 189 FL 190
L
Sbjct: 893 RL 894
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 78/135 (57%), Gaps = 6/135 (4%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEM----DGLHKVFKLQTTLAISSMCAFDRYGVLTK 274
DYKE++ V F++ + D+ H E + L + FKLQ +AI+++ AFD G + K
Sbjct: 1064 DYKEFNDHKNVHFIIQL--DEKHMKEFRDSPNLLLERFKLQKNVAITNLVAFDTNGQIRK 1121
Query: 275 FDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKK 334
+D IL+EFY RL YA RK + V A+ KLTNQ RFI E DG L + +KK
Sbjct: 1122 YDKVEDILEEFYHYRLNVYAARKAHWLRVFDADYRKLTNQYRFISEIIDGKLVVSKKKKS 1181
Query: 335 EMIAELIKRKYDSDP 349
++ EL +RKY+ P
Sbjct: 1182 VLVQELRQRKYEPFP 1196
>gi|219121754|ref|XP_002181225.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407211|gb|EEC47148.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1165
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 112/179 (62%), Gaps = 10/179 (5%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTW-LTTWMEECR 69
GLGTST EA+EYFS H F ++ D D + M F + +R+ W L + E
Sbjct: 618 GLGTSTPAEAREYFSAFNDHFRPFLWNSDIDGELLDMVFDGERAADRRAWILDVYDETSN 677
Query: 70 RRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
+ G + ++Y +F+NKE+I FSN DN RSIPS DGLKP RKVL+ C
Sbjct: 678 LLNDPSAGNN---------VSYEDFINKEMIHFSNADNIRSIPSAIDGLKPSQRKVLYAC 728
Query: 130 LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR + E+KVAQL G AEH+AYHHGE SL STII +AQ+FVGSNNINLL P GQFGT
Sbjct: 729 FKRKLKSEIKVAQLTGYCAEHTAYHHGEASLQSTIIGMAQDFVGSNNINLLVPSGQFGT 787
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Query: 214 RFESNDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLT 273
R E + E H + V F+VT+ +L + GL K FKL+T L ++M AF++ G +
Sbjct: 942 RGEVTSFVENHNTSKVSFLVTLKSAQLARMTQAGLEKSFKLKTNLQTTNMHAFNKDGQIC 1001
Query: 274 KFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFI--VEKCDGDLRIENR 331
KFDT I++ F+ VR++ Y R L+ +L EA L N+A FI V D DL R
Sbjct: 1002 KFDTAESIVEAFFPVRMQLYQDRIALLQSLLNYEASILRNKAGFIKAVTSGDIDLTSGRR 1061
Query: 332 KKKE 335
K+E
Sbjct: 1062 SKQE 1065
>gi|392861752|gb|EAS31980.2| DNA topoisomerase 2 [Coccidioides immitis RS]
Length = 1718
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 120/180 (66%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F DN+ I +AFSKK D+RK WL R
Sbjct: 724 GLGTSSTEDAEVYFRDLDRHLKEFHAMQDNEAQLIDLAFSKKKADDRKEWL--------R 775
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ K ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+
Sbjct: 776 QFKPGTYLDHSVDK----ITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYAMF 831
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN ++++KV +L G V+ +AY HGE SL TI+ LAQ FVGSNN+N L+P G FG+ L
Sbjct: 832 KRNVKKDMKVVELGGYVSGMTAYQHGEASLQQTIVGLAQTFVGSNNVNCLEPSGNFGSRL 891
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 81/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T + V F++ M + KA DGL + FKL T+A ++M AFD G +TK+DT
Sbjct: 1050 DYKDYNTHSKVHFIIQMDEKHMKKALEDGLEERFKLSKTIATTNMVAFDAEGRITKYDTA 1109
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILK FYAVR+ +Y KRK +L L E K TNQARF+ DG L I ++K ++I
Sbjct: 1110 EDILKAFYAVRIRFYEKRKQHLLAQLHKELDKFTNQARFVQMIIDGKLVISKKRKAKLIE 1169
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1170 ELKEKGFKPIP 1180
>gi|401881418|gb|EJT45718.1| DNA topoisomerase II [Trichosporon asahii var. asahii CBS 2479]
gi|406701579|gb|EKD04695.1| DNA topoisomerase II [Trichosporon asahii var. asahii CBS 8904]
Length = 1525
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 114/169 (67%), Gaps = 11/169 (6%)
Query: 22 EYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRRRKEMGIGEDYL 81
+YF++++RHR+ F D D I +AF+KK D+RK WL R+ + G +L
Sbjct: 737 KYFNDIQRHRLRFGTLEDEDKTLIDLAFNKKKADDRKEWL--------RQFKPGT---FL 785
Query: 82 YTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVA 141
T I ++FVNKELILFS DN RSIPS+ DGLKPG RKV+F C K+ + ++KV
Sbjct: 786 QTDDIDEIPISDFVNKELILFSMADNIRSIPSVADGLKPGQRKVIFGCFKKKIKNQIKVQ 845
Query: 142 QLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
Q+ G + E++AYHHGE SL STI+ LAQNF+GSNN+NLL P GQFGT L
Sbjct: 846 QIVGYILENTAYHHGETSLYSTIVGLAQNFIGSNNVNLLAPHGQFGTRL 894
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 80/131 (61%), Gaps = 2/131 (1%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+E HTDTTV F + M + + KAE DG K FKL TTL+ S+M FD G + K+ +
Sbjct: 1057 DYEENHTDTTVHFRLHMKEEGMKKAEADGFDKFFKLSTTLSTSNMVCFDLEGKIRKYSSP 1116
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL +FY RLEYYA RK YL L + +L+NQARF+ +L + N+KK ++
Sbjct: 1117 EEILGDFYPKRLEYYALRKQYLADDLNKQFDRLSNQARFVQMIIKKELSVSNKKKAVIVQ 1176
Query: 339 ELIKRKYDSDP 349
EL R +D P
Sbjct: 1177 EL--RDHDFRP 1185
>gi|119196923|ref|XP_001249065.1| hypothetical protein CIMG_02836 [Coccidioides immitis RS]
Length = 1635
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 120/180 (66%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F DN+ I +AFSKK D+RK WL R
Sbjct: 641 GLGTSSTEDAEVYFRDLDRHLKEFHAMQDNEAQLIDLAFSKKKADDRKEWL--------R 692
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ K ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+
Sbjct: 693 QFKPGTYLDHSVDK----ITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYAMF 748
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN ++++KV +L G V+ +AY HGE SL TI+ LAQ FVGSNN+N L+P G FG+ L
Sbjct: 749 KRNVKKDMKVVELGGYVSGMTAYQHGEASLQQTIVGLAQTFVGSNNVNCLEPSGNFGSRL 808
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 81/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T + V F++ M + KA DGL + FKL T+A ++M AFD G +TK+DT
Sbjct: 967 DYKDYNTHSKVHFIIQMDEKHMKKALEDGLEERFKLSKTIATTNMVAFDAEGRITKYDTA 1026
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILK FYAVR+ +Y KRK +L L E K TNQARF+ DG L I ++K ++I
Sbjct: 1027 EDILKAFYAVRIRFYEKRKQHLLAQLHKELDKFTNQARFVQMIIDGKLVISKKRKAKLIE 1086
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1087 ELKEKGFKPIP 1097
>gi|358393929|gb|EHK43330.1| hypothetical protein TRIATDRAFT_225747 [Trichoderma atroviride IMI
206040]
Length = 1677
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 136/223 (60%), Gaps = 23/223 (10%)
Query: 5 HDVMIAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTW 64
H + GLGTST+++A+ YF+N++ H F + +AFSKK D RK WL +
Sbjct: 708 HYKYLKGLGTSTNEDAQVYFTNLDEHLKEFSVMKPEEADLFDLAFSKKKADARKEWLGGF 767
Query: 65 MEECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRK 124
+ YL ++K ITY++FVNKELILFS DN RSIPS+ DGLKPG RK
Sbjct: 768 VPGT-----------YL-DHSSKLITYSDFVNKELILFSMADNIRSIPSMIDGLKPGQRK 815
Query: 125 VLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIG 184
VL+ C KRN ++ KV +LAG V+ +AYHHG+ SL TI+ LAQ+FVGSNNIN+L+P G
Sbjct: 816 VLYACFKRNVVKDEKVVELAGYVSGLTAYHHGDISLQQTIVGLAQDFVGSNNINVLEPSG 875
Query: 185 QFGTFL----------FIFES-TNLSGAVVNALDFGSGGWRFE 216
FG+ L +IF + + A+ ++LD S +FE
Sbjct: 876 NFGSRLAGGSDSASPRYIFTRLSPFARAIFSSLDEPSLNHQFE 918
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 82/140 (58%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE++ TV F + + + K +GL + FKL +A S++ AF+ G + K++
Sbjct: 1051 DYKEFNDHKTVHFEIQVDEKHMAKVLEEGLLERFKLTKQVATSNLVAFNTRGQIRKYEKV 1110
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+E+Y RLE Y KRKD+ GV A+ KL NQARFI E DGDL + +KK ++
Sbjct: 1111 EDILEEYYVYRLEMYQKRKDHWLGVYDADHRKLKNQARFIQEIIDGDLIVGKKKKTVLVK 1170
Query: 339 ELIKRKYDSDPVKSWKMKQN 358
EL KY++ P MK++
Sbjct: 1171 ELRDHKYEAFPPVKNNMKKS 1190
>gi|385301381|gb|EIF45573.1| dna topoisomerase ii [Dekkera bruxellensis AWRI1499]
Length = 407
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 117/178 (65%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ +E +EYFS +++H F + D I +AFSKK D+RK WL +
Sbjct: 24 GLGTSSPEEMREYFSKLDKHLKKFHILEEGDAGCINLAFSKKKADDRKEWLRAYRPGT-- 81
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+L T+ I ++F+NKELIL+S DN RSIPS+ DG KP RK+LF C
Sbjct: 82 ---------FLDPDLTE-IPISDFINKELILYSMADNIRSIPSVVDGFKPSQRKILFGCY 131
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN R E+KV+QL G +AEH+ YHHG+ SL+ TII+LAQ+FVGSNN+NLL P G FG+
Sbjct: 132 KRNLRGEIKVSQLEGYIAEHTGYHHGDASLIQTIISLAQDFVGSNNMNLLFPHGGFGS 189
>gi|320580632|gb|EFW94854.1| DNA topoisomerase II [Ogataea parapolymorpha DL-1]
Length = 1372
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 120/208 (57%), Gaps = 23/208 (11%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS E +EYFS ++RH F + D + I +AFSKK D+RK WL
Sbjct: 652 GLGTSLPTEMREYFSQLDRHLKTFHTLQEEDVSLIDLAFSKKKADDRKEWL--------- 702
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G I +EF+NKELILFS DN RSIPS+ DG KP RKVL+
Sbjct: 703 ---RGFQPGTFLDPNLTEIPISEFINKELILFSMADNIRSIPSVMDGFKPTQRKVLYGVY 759
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN E+KVAQL G + EHS YHHGE SL TII+LAQ+FVGSNN+N+L+P G FG+
Sbjct: 760 KRNLTSEIKVAQLVGYIGEHSGYHHGEASLTQTIISLAQDFVGSNNLNILKPNGGFGSRA 819
Query: 191 ----------FIF-ESTNLSGAVVNALD 207
+IF E T ++ V N LD
Sbjct: 820 SGGKDASAARYIFTEVTPITRKVYNTLD 847
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 77/122 (63%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H +KFVVT+S +++ K GL + FKL + + S+M AFD G + K+D
Sbjct: 980 DMEEQH-GVGIKFVVTLSKEEMEKTRRIGLKERFKLISIINTSNMVAFDPQGRIKKYDHV 1038
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
NQI++++Y VRL+YY +RKDY+ + + KL+ QA+F+ D +L I N+K+ ++
Sbjct: 1039 NQIIEDYYLVRLDYYQRRKDYMADLFSNQFEKLSYQAKFVKMIIDRELNINNKKRVNLVK 1098
Query: 339 EL 340
EL
Sbjct: 1099 EL 1100
>gi|358384566|gb|EHK22163.1| hypothetical protein TRIVIDRAFT_28551 [Trichoderma virens Gv29-8]
Length = 1646
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 121/186 (65%), Gaps = 12/186 (6%)
Query: 5 HDVMIAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTW 64
H + GLG+S++++A+ YF+N++ H F + +AFSKK D RK WL +
Sbjct: 709 HYKYLKGLGSSSNEDAQVYFTNLDEHLKEFDVMKPEEADMFDLAFSKKKADARKEWLGNF 768
Query: 65 MEECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRK 124
+ YL ++K I+Y++FVNKELILFS DN RSIPS+ DGLKPG RK
Sbjct: 769 VPGT-----------YL-DHSSKTISYSDFVNKELILFSMADNIRSIPSMIDGLKPGQRK 816
Query: 125 VLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIG 184
VL+ C KRN ++ KV +LAG V+ +AYHHGE SL TII LAQ+FVGSNNIN+L+P G
Sbjct: 817 VLYACFKRNVVKDEKVVELAGYVSGLTAYHHGEVSLQQTIIGLAQDFVGSNNINVLEPSG 876
Query: 185 QFGTFL 190
FG+ L
Sbjct: 877 NFGSRL 882
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 84/142 (59%), Gaps = 1/142 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE++ TV F + + + K +GL + FKL +A S++ AFD G + K++
Sbjct: 1052 DYKEFNDHKTVHFEIQVDEKHMAKVLEEGLLERFKLTKQVATSNLVAFDTRGRIRKYEKV 1111
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+E+Y RLE Y KRK++ V A+ KL NQARFI E DGDL + +KK ++
Sbjct: 1112 EDILEEYYIYRLEMYLKRKNHWLSVYDADHRKLKNQARFIQEIIDGDLIVGKKKKAILVK 1171
Query: 339 ELIKRKYDS-DPVKSWKMKQNK 359
EL RKY++ PVK+ K+ +
Sbjct: 1172 ELRDRKYEAFPPVKNNNTKKTQ 1193
>gi|319411861|emb|CBQ73904.1| probable DNA topoisomerase II [Sporisorium reilianum SRZ2]
Length = 1513
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 115/181 (63%), Gaps = 12/181 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++AK+YF +E+H++ F + + D I +AF+KK D+RK WL R
Sbjct: 702 GLGTSDPQDAKKYFRALEKHKLPFDVTQEGDRELIDLAFNKKKADDRKEWL--------R 753
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ G D+ T I Y +F+NKELILFS DN RSIPS+ DGLKPG RKV +
Sbjct: 754 QFRPGTYLDH----NTDRIPYADFINKELILFSMADNLRSIPSVVDGLKPGQRKVFYVMF 809
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
R E+KV L G V +AYHHG+ +L+ TI+ LAQNFVGSNN+NLL+P GQFGT L
Sbjct: 810 DRKSNAELKVNTLVGHVMGQAAYHHGDAALVMTIVGLAQNFVGSNNVNLLEPRGQFGTRL 869
Query: 191 F 191
Sbjct: 870 L 870
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 78/131 (59%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHT++TV F+V ++ + G FKL ++ ++M FD+ G + K+ +
Sbjct: 1030 DYKEYHTESTVNFIVELTAKGQAEIAEKGADAFFKLSCQISTTNMVLFDQDGKIKKYSSP 1089
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL+EFY +RL YY KRK++L L KL+NQARF+ + L + NRK+ +++A
Sbjct: 1090 EEILEEFYLLRLSYYQKRKEHLVDQLKLMYDKLSNQARFVQMIINRQLVVSNRKRADIVA 1149
Query: 339 ELIKRKYDSDP 349
+L K + P
Sbjct: 1150 DLRKNDFRPFP 1160
>gi|390335410|ref|XP_003724141.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-alpha-like
[Strongylocentrotus purpuratus]
Length = 1597
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/142 (59%), Positives = 109/142 (76%), Gaps = 1/142 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISS-MCAFDRYGVLTKFDT 277
DYKEYHTDTTVKFV+ MS DKL KAE GLHK FKLQ+T++ ++ M +D GV+ ++D
Sbjct: 965 DYKEYHTDTTVKFVIKMSEDKLLKAEEQGLHKTFKLQSTISQANVMVLYDSNGVIRRYDN 1024
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
+IL+EF+A+R+E Y RK YLEG+L AE+ +L NQARFI+EK +G ++IEN KKEMI
Sbjct: 1025 VEEILREFFALRVELYHSRKAYLEGILEAESSRLNNQARFIMEKIEGKIKIENMPKKEMI 1084
Query: 338 AELIKRKYDSDPVKSWKMKQNK 359
L+KR +DSDPVK+WK Q K
Sbjct: 1085 QILVKRGFDSDPVKAWKESQVK 1106
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 69/78 (88%), Gaps = 2/78 (2%)
Query: 113 SLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFV 172
LC LKPG RKVL+TC K+ +++E+KVAQ+AG+VAE SAYHHGE SLMSTI+NLAQNFV
Sbjct: 728 PLC--LKPGQRKVLYTCFKKYEKKEIKVAQMAGAVAELSAYHHGETSLMSTIVNLAQNFV 785
Query: 173 GSNNINLLQPIGQFGTFL 190
GSNN+NLLQPIGQFGT L
Sbjct: 786 GSNNVNLLQPIGQFGTRL 803
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 50/55 (90%)
Query: 117 GLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNF 171
GLKPG RKVL+TC K+ +++E+KVAQ+AG+VAE SAYHHGE SLMSTI+NLAQNF
Sbjct: 642 GLKPGQRKVLYTCFKKYEKKEIKVAQMAGAVAELSAYHHGETSLMSTIVNLAQNF 696
>gi|258569355|ref|XP_002543481.1| DNA topoisomerase 2 [Uncinocarpus reesii 1704]
gi|237903751|gb|EEP78152.1| DNA topoisomerase 2 [Uncinocarpus reesii 1704]
Length = 1704
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 118/180 (65%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F DN+ I +AFSKK DERK WL R
Sbjct: 719 GLGTSSTEDAEIYFRDLDRHLKEFHALQDNEAQLIDLAFSKKKADERKEWL--------R 770
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ K I+YT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+
Sbjct: 771 QFKPGTYLDHSVEK----ISYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYAMF 826
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN R++ KV +L G V+ + Y HGE SL TI+ LAQ FVGSNN+N L+P G FG+ L
Sbjct: 827 KRNVRKDAKVVELGGYVSGMTGYQHGEVSLQQTIVGLAQTFVGSNNVNCLEPSGNFGSRL 886
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 80/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T + V F++ M + KA DGL + FKL T+ S+M AFD G +TK++T
Sbjct: 1045 DYKDYNTHSKVHFIIQMDEKHMKKAVEDGLEERFKLSRTITTSNMVAFDAEGRITKYNTA 1104
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
IL+ F+AVR+ +Y KRK ++ L E KLTNQARF+ DG L I + K +++
Sbjct: 1105 EDILEAFFAVRIRFYEKRKQFMLAQLHKELEKLTNQARFVQMIIDGKLVIAKKPKAKLMQ 1164
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1165 ELKEKAFKPFP 1175
>gi|340960813|gb|EGS21994.1| topoisomerase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1887
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 120/182 (65%), Gaps = 12/182 (6%)
Query: 9 IAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEEC 68
+ GLG+S++++A+ YF +++RH F+ D + + + FSKK D RK WL ++
Sbjct: 727 LKGLGSSSNEDAQVYFKDLDRHLKRFEVMTDEESKMLELVFSKKKADARKEWLANFVPGT 786
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
YL + TT + Y +F++KELILFS DN RSIPS+ DGLKPG RKV++
Sbjct: 787 -----------YLDS-TTHTVKYKDFIDKELILFSMADNVRSIPSVVDGLKPGQRKVVYG 834
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + KVA+ AG ++E +AYHHGEQSL TI+ LAQN+VGSNN+N+L+P G FG+
Sbjct: 835 AFKRNLVNDQKVAEFAGYISEVAAYHHGEQSLQQTIVGLAQNYVGSNNVNILEPSGNFGS 894
Query: 189 FL 190
L
Sbjct: 895 RL 896
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 83/145 (57%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE++ TV FV+ M P + A +GL + FKL ++ +++ AFD G + K++
Sbjct: 1066 DYKEFNDHRTVHFVIEMEPKHMEAALKEGLIEKFKLSKIISATNLVAFDTQGKIKKYENP 1125
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
++L+E+Y RL Y +RK + V AE KL NQ RFI+E +G L I ++KK ++
Sbjct: 1126 EEMLEEYYHYRLAMYTERKKHWLSVYDAEYRKLKNQYRFILEIIEGKLVINRKQKKILVK 1185
Query: 339 ELIKRKYDSDPVKSWKMKQNKENAL 363
EL R Y+ P + K +N + L
Sbjct: 1186 ELRDRDYEPFPPNAEKKVKNTDEEL 1210
>gi|452000834|gb|EMD93294.1| hypothetical protein COCHEDRAFT_1192655 [Cochliobolus
heterostrophus C5]
Length = 1631
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 119/180 (66%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +A+ YF +++ H F+ + ++ I +AFSKK D RK WL ++ R
Sbjct: 652 GLGTSDIPDAQIYFKDLDTHMKRFQVMREEEEKLIELAFSKKKADARKDWLRDFV--PGR 709
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
++ TT I+Y +FVNKELILFS DN RSIPS+ DGLKPG RKV++TC
Sbjct: 710 HLDL----------TTPDISYDDFVNKELILFSMADNVRSIPSVVDGLKPGQRKVMYTCF 759
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN +++VKV +LAG+V+ + Y HGE S+ TI+ LAQNFVG+NNIN L+P G FG+ L
Sbjct: 760 RRNIKKDVKVVELAGAVSGSTDYAHGEASMQGTIVGLAQNFVGTNNINFLEPSGNFGSRL 819
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 71/124 (57%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY +Y+T V FV+ M + A GL ++FKL A S++ AFD G + K+ T
Sbjct: 983 DYIDYNTPDRVHFVIKMEDKHMATALAKGLEEMFKLYKPQATSNLVAFDAQGRIHKYSTV 1042
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I++EFY +RL YY KRK + VL E LKLTNQA+FI DG + +KK ++
Sbjct: 1043 LDIIEEFYHIRLRYYEKRKQHQLQVLEKELLKLTNQAKFIQMIIDGKFTVSKKKKAVLVQ 1102
Query: 339 ELIK 342
EL K
Sbjct: 1103 ELKK 1106
>gi|303322098|ref|XP_003071042.1| DNA topoisomerase II, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240110741|gb|EER28897.1| DNA topoisomerase II, putative [Coccidioides posadasii C735 delta
SOWgp]
Length = 1717
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 119/180 (66%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F D + I +AFSKK D+RK WL R
Sbjct: 724 GLGTSSTEDAEVYFRDLDRHLKEFHAMQDTEAQLIDLAFSKKKADDRKEWL--------R 775
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ K ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+
Sbjct: 776 QFKPGTYLDHSVDK----ITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYAMF 831
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN ++++KV +L G V+ +AY HGE SL TI+ LAQ FVGSNN+N L+P G FG+ L
Sbjct: 832 KRNVKKDMKVVELGGYVSGMTAYQHGEASLQQTIVGLAQTFVGSNNVNCLEPSGNFGSRL 891
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 81/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T + V F++ M + KA DGL + FKL T+A ++M AFD G +TK+DT
Sbjct: 1050 DYKDYNTHSKVHFIIQMDEKHMKKALEDGLEERFKLSKTIATTNMVAFDAEGRITKYDTA 1109
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILK FYAVR+ +Y KRK +L L E K TNQARF+ DG L I ++K ++I
Sbjct: 1110 EDILKAFYAVRIRFYEKRKQHLLAQLHKELDKFTNQARFVQMIIDGKLVISKKRKPKLIE 1169
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1170 ELKEKGFKPIP 1180
>gi|320032749|gb|EFW14700.1| DNA topoisomerase 2 [Coccidioides posadasii str. Silveira]
Length = 1717
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 119/180 (66%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++++A+ YF +++RH F D + I +AFSKK D+RK WL R
Sbjct: 724 GLGTSSTEDAEVYFRDLDRHLKEFHAMQDTEAQLIDLAFSKKKADDRKEWL--------R 775
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ K ITYT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+
Sbjct: 776 QFKPGTYLDHSVDK----ITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYAMF 831
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN ++++KV +L G V+ +AY HGE SL TI+ LAQ FVGSNN+N L+P G FG+ L
Sbjct: 832 KRNVKKDMKVVELGGYVSGMTAYQHGEASLQQTIVGLAQTFVGSNNVNCLEPSGNFGSRL 891
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 81/131 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T + V F++ M + KA DGL + FKL T+A ++M AFD G +TK+DT
Sbjct: 1050 DYKDYNTHSKVHFIIQMDEKHMKKALEDGLEERFKLSKTIATTNMVAFDAEGRITKYDTA 1109
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILK FYAVR+ +Y KRK +L L E K TNQARF+ DG L I ++K ++I
Sbjct: 1110 EDILKAFYAVRIRFYEKRKQHLLAQLHKELDKFTNQARFVQMIIDGKLVISKKRKPKLIE 1169
Query: 339 ELIKRKYDSDP 349
EL ++ + P
Sbjct: 1170 ELKEKGFKPIP 1180
>gi|451854684|gb|EMD67976.1| hypothetical protein COCSADRAFT_80849 [Cochliobolus sativus ND90Pr]
Length = 1633
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 119/180 (66%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +A+ YF +++ H F+ + ++ I +AFSKK D RK WL ++ R
Sbjct: 653 GLGTSDIPDAQIYFKDLDTHMKRFQVMREEEEKLIELAFSKKKADARKDWLRDFV--PGR 710
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
++ TT I+Y +FVNKELILFS DN RSIPS+ DGLKPG RKV++TC
Sbjct: 711 HLDL----------TTPDISYDDFVNKELILFSMADNVRSIPSVIDGLKPGQRKVMYTCF 760
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN +++VKV +LAG+V+ + Y HGE S+ TI+ LAQNFVG+NNIN L+P G FG+ L
Sbjct: 761 RRNIKKDVKVVELAGAVSGSTDYAHGEASMQGTIVGLAQNFVGTNNINFLEPSGNFGSRL 820
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 74/131 (56%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY +Y+T V FV+ M + A GL ++FKL A S++ AFD G + K+ T
Sbjct: 984 DYIDYNTPDRVHFVIKMEDKYMAAALAKGLEEMFKLFKPQATSNLVAFDAQGRIHKYSTV 1043
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I++EFY +RL YY KRK + V+ E LKLTNQARFI DG L + +KK ++
Sbjct: 1044 LDIIEEFYHIRLRYYEKRKQHQLQVMEKELLKLTNQARFIQMIIDGKLTVSKKKKAALVQ 1103
Query: 339 ELIKRKYDSDP 349
EL K + P
Sbjct: 1104 ELKKLGFAPIP 1114
>gi|448936620|gb|AGE60167.1| DNA topoisomerase II [Acanthocystis turfacea Chlorella virus
WI0606]
Length = 1056
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 119/182 (65%), Gaps = 13/182 (7%)
Query: 9 IAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEEC 68
+ GLGTSTS++AK YF N++ +F ++ D+ + I +F+K DERKTWL +
Sbjct: 557 LKGLGTSTSEDAKRYFKNLKGLTKVFGWTDDSSEL-IDRSFNKSRADERKTWLLNF---- 611
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
E G D TK I +F++KELILFS D ERS+PS+ DGLKP RK+LF+
Sbjct: 612 ----EPGNQLDQTLTK----IPVDDFIDKELILFSRYDVERSVPSVVDGLKPSQRKILFS 663
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN E+KVAQ AG V+EH+ YHHGE SL I+ +AQ++VGSNNINLL P GQFG+
Sbjct: 664 AFKRNLTSEIKVAQFAGYVSEHAGYHHGEASLQGAIVAMAQDYVGSNNINLLMPKGQFGS 723
Query: 189 FL 190
L
Sbjct: 724 RL 725
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 12/130 (9%)
Query: 219 DYKEYHTDTTVKFVV--TMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
D++E H + V F + T +PD K+ KL++T+ ++M AFD+ + K+
Sbjct: 880 DFREKHDEKNVLFEIDFTGTPDP----------KILKLESTIRTTNMHAFDKNSGIRKYG 929
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
+ I+ +++ VR E+Y KRK+ + L A L N++RFI DG L I R + ++
Sbjct: 930 SPLDIITDWFEVRKEFYVKRKEDMLKDLKARVLVSQNKSRFINSVNDGSLVITRRAEDDV 989
Query: 337 IAELIKRKYD 346
+ +L K K+D
Sbjct: 990 VKDLKKMKFD 999
>gi|367053477|ref|XP_003657117.1| DNA topoisomerase 2-like protein [Thielavia terrestris NRRL 8126]
gi|347004382|gb|AEO70781.1| DNA topoisomerase 2-like protein [Thielavia terrestris NRRL 8126]
Length = 1705
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 120/182 (65%), Gaps = 12/182 (6%)
Query: 9 IAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEEC 68
+ GLG+S++++A+ YF +++RH F+ + +AFSKK D RK WL +
Sbjct: 719 LKGLGSSSNEDAQIYFKDLDRHLKKFEVLKPEESQLFELAFSKKKADARKEWLGNF---- 774
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
I YL + ++ TYT+FV KELILFS DN RSIPS+ DGLKPG RKV++
Sbjct: 775 -------IPGTYLDSTASRK-TYTDFVQKELILFSMADNMRSIPSMIDGLKPGQRKVIYG 826
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN ++ KVA+LAG ++E +AYHHGEQSL TII LAQN+VGSNN+N L+P G FG+
Sbjct: 827 AFKRNLVKDQKVAELAGYISEVAAYHHGEQSLQQTIIGLAQNYVGSNNVNCLEPSGNFGS 886
Query: 189 FL 190
L
Sbjct: 887 RL 888
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMD-GLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
DY+E++ V FV+ M DK KA +D GL + FKL T+ +++ AF+ G + K+++
Sbjct: 1058 DYREFNDHQNVHFVIEME-DKHLKAALDEGLLEKFKLTKTITTTNLVAFNTRGQIQKYES 1116
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
+I++E+Y RL+ Y +RK + GV A+ KL NQ RF+ E + L + +KK ++
Sbjct: 1117 PEEIMEEYYHYRLKMYTERKTHWLGVYHADYRKLQNQYRFVSEIIENKLVVNKKKKAVLV 1176
Query: 338 AELIKRKYDSDPVK 351
EL RKY++ P +
Sbjct: 1177 QELRDRKYEAFPPR 1190
>gi|448935941|gb|AGE59490.1| DNA topoisomerase II [Acanthocystis turfacea Chlorella virus
OR0704.3]
Length = 1056
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 118/182 (64%), Gaps = 13/182 (7%)
Query: 9 IAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEEC 68
+ GLGTSTS++AK YF N++ +F ++ D+ + I +F+K DERKTWL +
Sbjct: 557 LKGLGTSTSEDAKRYFKNLKGLTKVFGWTDDSSEL-IDRSFNKSRADERKTWLLNF---- 611
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
E G D TK I +F+NKELILFS D ERSIPS+ DGLKP RK+LF+
Sbjct: 612 ----EPGNQLDQTLTK----IPVDDFLNKELILFSRYDVERSIPSVVDGLKPSQRKILFS 663
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+RN E+KVAQ AG +EH+ YHHGE SL II +AQ++VGSNNINLL P GQFG+
Sbjct: 664 AFRRNLTSEIKVAQFAGYTSEHAGYHHGEASLQGAIIGMAQDYVGSNNINLLAPKGQFGS 723
Query: 189 FL 190
L
Sbjct: 724 RL 725
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 13/159 (8%)
Query: 197 NLSGAVVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLHKA-----EMDGL--- 248
++ G +V + G W +NDYKE H +T ++ + + H E+D +
Sbjct: 845 SIKGKMVTVSELPVGTW---TNDYKE-HLETLIEKKIVADFREKHDETNVLFEIDFIGVP 900
Query: 249 -HKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAE 307
K+ KL++T+ ++M AFD G + K+DT I+ ++++ R E+Y KRK+ L L A
Sbjct: 901 DPKILKLESTIRTTNMHAFDSRGKIKKYDTPLDIMTDWFSTRKEFYVKRKEDLLKDLKAR 960
Query: 308 ALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKYD 346
L N+ FI DG L I R +++++ +L K K+D
Sbjct: 961 VLVAQNKHMFITSVNDGTLVITRRAEEDVVKDLKKMKFD 999
>gi|224613376|gb|ACN60267.1| DNA topoisomerase 2-alpha [Salmo salar]
Length = 742
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 81/145 (55%), Positives = 108/145 (74%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHTDT V+FVV M+ ++L +AE GLHKVFKLQ +L +SM FD G L K++
Sbjct: 134 DYKEYHTDTAVRFVVKMTEERLREAEAAGLHKVFKLQQSLTCNSMVLFDHVGSLKKYELV 193
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILK+F+ +R++YY RKD+L G+LGAE+ KLTNQARFI+EK +G L IEN+ KK++I
Sbjct: 194 QDILKDFFELRMKYYVLRKDWLAGMLGAESAKLTNQARFILEKIEGTLVIENKPKKQLIL 253
Query: 339 ELIKRKYDSDPVKSWKMKQNKENAL 363
L + YDSDPVK+WK Q K+ ++
Sbjct: 254 MLTEMGYDSDPVKAWKEAQEKDRSV 278
>gi|448934185|gb|AGE57739.1| DNA topoisomerase II [Acanthocystis turfacea Chlorella virus NTS-1]
Length = 1066
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 119/182 (65%), Gaps = 13/182 (7%)
Query: 9 IAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEEC 68
+ GLGTSTS++AK YF N++ +F ++ D+ + I +F+K DERKTWL +
Sbjct: 567 LKGLGTSTSEDAKRYFKNLKGLTKVFGWTDDSSEL-IDRSFNKSRADERKTWLLNF---- 621
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
E G D TK I +F++KELILFS D ERS+PS+ DGLKP RK+LF+
Sbjct: 622 ----EPGNQLDQTLTK----IPVDDFIDKELILFSRYDVERSVPSVVDGLKPSQRKILFS 673
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN E+KVAQ AG V+EH+ YHHGE SL I+ +AQ++VGSNNINLL P GQFG+
Sbjct: 674 AFKRNLTSEIKVAQFAGYVSEHAGYHHGEASLQGAIVAMAQDYVGSNNINLLMPKGQFGS 733
Query: 189 FL 190
L
Sbjct: 734 RL 735
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 12/130 (9%)
Query: 219 DYKEYHTDTTVKFVV--TMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
D++E H + V F + T +PD K+ KL++T+ ++M AFD+ + K+
Sbjct: 890 DFREKHDEKNVLFEIDFTGTPDP----------KILKLESTIRTTNMHAFDKNSGIRKYG 939
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
+ I+ +++ VR E+Y KRK+ L L A L N++RFI DG L I R ++++
Sbjct: 940 SPLDIITDWFEVRKEFYVKRKEDLLKDLKARVLVAQNKSRFITSVNDGTLVITRRAEEDV 999
Query: 337 IAELIKRKYD 346
I +L K K+D
Sbjct: 1000 IKDLGKLKFD 1009
>gi|169606618|ref|XP_001796729.1| hypothetical protein SNOG_06355 [Phaeosphaeria nodorum SN15]
gi|111065066|gb|EAT86186.1| hypothetical protein SNOG_06355 [Phaeosphaeria nodorum SN15]
Length = 1705
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 116/180 (64%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +A+ YF +++ H F+ ++ I +AFSKK D RK WL ++
Sbjct: 724 GLGTSDIPDAQVYFKDLDTHMKRFQVMRAEEEKLIELAFSKKKADARKEWLGNFVP---- 779
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G D TT I+Y +FVNKE ILFS DN RSIPS+ DGLKPG RKVL+TC
Sbjct: 780 ----GNHLDL----TTPEISYDDFVNKEFILFSIADNLRSIPSVMDGLKPGQRKVLYTCF 831
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN +++VKV +LAGSV+ + Y HGE S+ TI+ LAQNFVGSNNIN L+P G FG+ L
Sbjct: 832 RRNIKKDVKVVELAGSVSGSTDYAHGEASMQGTIVGLAQNFVGSNNINYLEPSGNFGSRL 891
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY +Y+T V F++ M + A GL + FKL + + S++ AFD G + K+ +
Sbjct: 1055 DYIDYNTPDRVHFIIKMEDKHMLNAVQKGLEETFKLYSKQSTSNLVAFDAQGRIHKYASV 1114
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I++EFY VRL YY KRK + V+ E ++ NQARFI +G L + +KK ++A
Sbjct: 1115 LDIMEEFYHVRLRYYEKRKQHQLEVMEKELSRMNNQARFIQMIIEGKLVVSKKKKAVLVA 1174
Query: 339 ELIK 342
EL K
Sbjct: 1175 ELRK 1178
>gi|448925309|gb|AGE48889.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus AP110A]
Length = 1058
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 118/181 (65%), Gaps = 13/181 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS++AK+YF N++ +F ++ D+ + I +F+K DERKTWL +
Sbjct: 561 GLGTSTSEDAKKYFKNLKSLVKIFGWTEDSGEL-IDRSFNKSRPDERKTWLLDFQP---- 615
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G +KT I +F++KELILFS D ERSIPS+ DGLKP RK+LF
Sbjct: 616 ------GNQLDQSKTN--IPVPDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFAAF 667
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN E+KVAQ +G VAEHS YHHGEQSL I+ +AQ++VGSNN+NLL P GQFG+ L
Sbjct: 668 KRNLTNEMKVAQFSGYVAEHSGYHHGEQSLQGAIVGMAQDYVGSNNMNLLLPNGQFGSRL 727
Query: 191 F 191
Sbjct: 728 L 728
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 65/129 (50%), Gaps = 12/129 (9%)
Query: 219 DYKEYHTDTTVKFVVTMS--PDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
D++E HT+ V F + PD + KL+ + ++M AFD G + K+
Sbjct: 882 DFREKHTEKNVLFEIDFPGEPD----------LSILKLEKAIRTTNMHAFDPQGKIKKYA 931
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
I+++++ VR E+Y KRK+YL L +A N+ RFI + +L + + + +
Sbjct: 932 DPLDIIRDWFEVRREFYTKRKNYLLKDLSHKAAIAENKHRFITLIVNDELVLSKKTESVI 991
Query: 337 IAELIKRKY 345
++EL K+
Sbjct: 992 LSELRTLKF 1000
>gi|448930040|gb|AGE53606.1| DNA topoisomerase II [Acanthocystis turfacea Chlorella virus
GM0701.1]
Length = 515
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 117/178 (65%), Gaps = 13/178 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS++AK YF N++ +F ++ D+ + I +F+K DERKTWL +
Sbjct: 18 GLGTSTSEDAKRYFKNLKGLTKVFGWTDDSSEL-IDRSFNKSRADERKTWLLDF------ 70
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D TK I +F+NKELILFS D ERSIPS+ DGLKP RK+LF+
Sbjct: 71 --EPGNQLDQTLTK----IPVDDFLNKELILFSRYDVERSIPSVVDGLKPSQRKILFSAF 124
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN +E+KVAQ AG +EH+ YHHGE SL II +AQ++VGSNNINLL P GQFG+
Sbjct: 125 KRNLVQEIKVAQFAGYTSEHAGYHHGEASLQGAIIGMAQDYVGSNNINLLVPKGQFGS 182
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 12/130 (9%)
Query: 219 DYKEYHTDTTVKFVVTM--SPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
D++E H + V F V PD K+ KL++T+ ++M AFD G + K+D
Sbjct: 339 DFREKHDEKHVLFEVDFIGVPDP----------KILKLESTIRTTNMHAFDPSGKIKKYD 388
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
T I+ ++++ R E+Y KRK+ + L A L N++RFI DG L I R ++++
Sbjct: 389 TPLDIITDWFSTRKEFYVKRKEDMLKDLKARVLVAQNKSRFINSVNDGSLVITRRAEEDV 448
Query: 337 IAELIKRKYD 346
+ +L K K+D
Sbjct: 449 VKDLEKMKFD 458
>gi|407916972|gb|EKG10299.1| DNA topoisomerase II eukaryotic-type [Macrophomina phaseolina MS6]
Length = 1732
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 116/178 (65%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS ++A EYF ++++H F D + I +AFSKK D RK WL ++
Sbjct: 678 GLGTSKPEDAVEYFQDLDKHLKEFHTMKDQEAELIDLAFSKKKADARKEWLRNFVPGT-- 735
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
YL +K I+Y +FVNKELILFS +DN RSIPS+ DG KPG RKVL+TC
Sbjct: 736 ---------YLDMSASK-ISYEDFVNKELILFSMVDNLRSIPSVIDGFKPGQRKVLYTCF 785
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N R+++KV +LAG V + Y +G+ SL TI+ LAQNFVGSNNINLL+P G FG+
Sbjct: 786 KKNLRKDIKVNELAGFVGGLTNYAYGDASLQQTIVGLAQNFVGSNNINLLEPSGNFGS 843
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 79/132 (59%), Gaps = 1/132 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMD-GLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
DY EYHT T V+FV+ MS K ++ GL + FKL ++A S++ AFD G + K+ T
Sbjct: 1008 DYNEYHTLTKVRFVIKMSDAKAMATALEMGLEERFKLYKSMATSNLVAFDHQGRIHKYAT 1067
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
IL+EFY +RL+YY KRK L + E KL+NQ+RFI DG L I +KK ++
Sbjct: 1068 ELDILEEFYILRLKYYEKRKQNLLDEMNRELEKLSNQSRFIKMIIDGKLTISKKKKAVLV 1127
Query: 338 AELIKRKYDSDP 349
AEL K + P
Sbjct: 1128 AELKKLGFKPIP 1139
>gi|396467124|ref|XP_003837847.1| similar to DNA topoisomerase II [Leptosphaeria maculans JN3]
gi|312214411|emb|CBX94403.1| similar to DNA topoisomerase II [Leptosphaeria maculans JN3]
Length = 1716
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 118/180 (65%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS +A+ YF +++ H F+ + ++ I +AFSKK D RK WL ++
Sbjct: 737 GLGTSDIPDAQIYFKDLDTHMKSFQVMREEEEKLIELAFSKKKADARKEWLRDFVP---- 792
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G D TT+ I+Y +FVNKELILFS DN RSIPS+ DGLKPG RKV++TC
Sbjct: 793 ----GQHLDL----TTQEISYDDFVNKELILFSMADNLRSIPSVIDGLKPGQRKVMYTCF 844
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+RN +++VKV LAGSV+ + Y HGE S+ TI+ LAQNFVG+NNIN L+P G FG+ L
Sbjct: 845 RRNIKKDVKVIDLAGSVSGTTDYAHGESSMQGTIVGLAQNFVGTNNINYLEPSGNFGSRL 904
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 74/131 (56%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY +Y+T V F++ M + A GL ++FKL + +++ AFD +G + K+ T
Sbjct: 1068 DYIDYNTPDRVHFIIKMEDKYMAAALAKGLEEMFKLFKPQSTTNLVAFDAHGRIHKYATV 1127
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I++EFY VRL YY KRK + V+ E K+TNQA+FI DG L + +KK ++
Sbjct: 1128 LDIIEEFYHVRLRYYEKRKQHQLEVMHKELSKMTNQAKFIQMIIDGKLVVSKKKKLALVQ 1187
Query: 339 ELIKRKYDSDP 349
EL K + P
Sbjct: 1188 ELKKLGFTPIP 1198
>gi|448936287|gb|AGE59835.1| DNA topoisomerase II [Acanthocystis turfacea Chlorella virus
TN603.4.2]
Length = 1066
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 118/182 (64%), Gaps = 13/182 (7%)
Query: 9 IAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEEC 68
+ GLGTSTS++AK YF N++ +F ++ D+ + I +F+K DERKTWL +
Sbjct: 567 LKGLGTSTSEDAKRYFKNLKGLTKVFGWTDDSSEL-IDRSFNKSRADERKTWLLDF---- 621
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
E G D TK I +F+NKELILFS D ERSIPS+ DGLKP RK+LF+
Sbjct: 622 ----EPGNQLDQTLTK----IPVDDFLNKELILFSRYDVERSIPSVVDGLKPSQRKILFS 673
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+RN E+KVAQ AG +EH+ YHHGE SL II +AQ++VGSNNINLL P GQFG+
Sbjct: 674 AFRRNLTSEIKVAQFAGYTSEHAGYHHGEASLQGAIIGMAQDYVGSNNINLLAPKGQFGS 733
Query: 189 FL 190
L
Sbjct: 734 RL 735
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 11/158 (6%)
Query: 197 NLSGAVVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDK------LHKAEMDGLH- 249
++ G +V + G W +NDYKEY K +V +K L + + G+
Sbjct: 855 SMKGKMVTVSELPVGTW---TNDYKEYLETLIEKKIVADFREKHDETNVLFEIDFIGVPD 911
Query: 250 -KVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEA 308
K+ KL++T+ ++M AFD G + K+DT I+ +++ R E+Y KRK+ + L A
Sbjct: 912 PKILKLESTIRTTNMHAFDSRGKIKKYDTPMDIITDWFTTRKEFYIKRKEDMLKDLKARV 971
Query: 309 LKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKYD 346
L N++RFI DG L I R ++++I +L K K+D
Sbjct: 972 LVAQNKSRFITNVNDGMLVITRRVEEDVIKDLGKLKFD 1009
>gi|448927391|gb|AGE50965.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus CVB-1]
Length = 1058
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 118/181 (65%), Gaps = 13/181 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS++AK+YF N++ +F ++ D+ + I +F+K DERKTWL +
Sbjct: 561 GLGTSTSEDAKKYFKNLKSLVKIFGWTEDSGEL-IDRSFNKSRPDERKTWLLDFQP---- 615
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G +KT I +F++KELILFS D ERSIPS+ DGLKP RK+LF
Sbjct: 616 ------GNQLDQSKTN--IPVPDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFAAF 667
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN E+KVAQ +G VAEHS YHHGEQSL I+ +AQ++VGSNN+NLL P GQFG+ L
Sbjct: 668 KRNLTNEMKVAQFSGYVAEHSGYHHGEQSLQGAIVGMAQDYVGSNNMNLLLPNGQFGSRL 727
Query: 191 F 191
Sbjct: 728 L 728
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 12/129 (9%)
Query: 219 DYKEYHTDTTVKFVVTMS--PDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
D++E HT+ V F + S P+ + KL+ + ++M AFD G + K+
Sbjct: 882 DFREKHTEKNVLFEIDFSGEPN----------ISILKLEKVIRTTNMHAFDPQGKIKKYA 931
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
I+++++ +R E+Y KRK+YL L +A N+ RFI + +L + + + +
Sbjct: 932 EPLDIIRDWFEIRREFYTKRKNYLLKDLSHKAAIAENKHRFITLIVNDELVLSKKTESVI 991
Query: 337 IAELIKRKY 345
++EL K+
Sbjct: 992 LSELRTLKF 1000
>gi|448926996|gb|AGE50571.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus CVA-1]
gi|448928680|gb|AGE52250.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus CVR-1]
Length = 1058
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 118/181 (65%), Gaps = 13/181 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS++AK+YF N++ +F ++ D+ + I +F+K DERKTWL +
Sbjct: 561 GLGTSTSEDAKKYFKNLKSLVKIFGWTEDSGEL-IDRSFNKSRPDERKTWLLDFQP---- 615
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G +KT I +F++KELILFS D ERSIPS+ DGLKP RK+LF
Sbjct: 616 ------GNQLDQSKTN--IPVPDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFAAF 667
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN E+KVAQ +G VAEHS YHHGEQSL I+ +AQ++VGSNN+NLL P GQFG+ L
Sbjct: 668 KRNLTNEMKVAQFSGYVAEHSGYHHGEQSLQGAIVGMAQDYVGSNNMNLLLPNGQFGSRL 727
Query: 191 F 191
Sbjct: 728 L 728
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 12/129 (9%)
Query: 219 DYKEYHTDTTVKFVVTMS--PDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
D++E HT+ V F + S PD + KL+ + ++M AFD G + K+
Sbjct: 882 DFREKHTEKNVMFEIDYSGEPD----------ISILKLEKAIRTTNMHAFDPQGKIKKYA 931
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
+ I+++++ VR E+Y KRK+YL L +A N+ RFI + +L + + + +
Sbjct: 932 CSLDIIRDWFEVRREFYTKRKNYLLKDLSHKAAIAENKHRFITLIVNDELVLSKKTESVI 991
Query: 337 IAELIKRKY 345
++EL K+
Sbjct: 992 LSELRTLKF 1000
>gi|53854901|gb|AAU95770.1| topoisomerase II [Paramecium bursaria Chlorella virus Marburg 1]
Length = 1058
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 118/181 (65%), Gaps = 13/181 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS++AK+YF N++ +F ++ D+ + I +F+K DERKTWL +
Sbjct: 561 GLGTSTSEDAKKYFKNLKSLVKIFGWTEDSGEL-IDRSFNKSRPDERKTWLLDFQP---- 615
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G +KT I +F++KELILFS D ERSIPS+ DGLKP RK+LF
Sbjct: 616 ------GNQLDQSKTN--IPVPDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFAAF 667
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN E+KVAQ +G VAEHS YHHGEQSL I+ +AQ++VGSNN+NLL P GQFG+ L
Sbjct: 668 KRNLTNEMKVAQFSGYVAEHSGYHHGEQSLQGAIVGMAQDYVGSNNMNLLLPNGQFGSRL 727
Query: 191 F 191
Sbjct: 728 L 728
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 12/129 (9%)
Query: 219 DYKEYHTDTTVKFVVTMS--PDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
D++E HT+ V F + S PD + KL+ + ++M AFD G + K+
Sbjct: 882 DFREKHTEKNVMFEIDYSGEPD----------ISILKLEKVIRTTNMHAFDPQGKIKKYA 931
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
I+++++ VR E+Y KRK+YL L +A N+ RFI + +L + + + +
Sbjct: 932 DPLDIIRDWFEVRREFYTKRKNYLLKDLSHKAAIAENKHRFITLIVNDELVLSKKTESVI 991
Query: 337 IAELIKRKY 345
++EL K+
Sbjct: 992 LSELRTLKF 1000
>gi|448928346|gb|AGE51917.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus CVM-1]
Length = 1058
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 118/181 (65%), Gaps = 13/181 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS++AK+YF N++ +F ++ D+ + I +F+K DERKTWL +
Sbjct: 561 GLGTSTSEDAKKYFKNLKSLVKIFGWTEDSGEL-IDRSFNKSRPDERKTWLLDFQP---- 615
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G +KT I +F++KELILFS D ERSIPS+ DGLKP RK+LF
Sbjct: 616 ------GNQLDQSKTN--IPVPDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFAAF 667
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN E+KVAQ +G VAEHS YHHGEQSL I+ +AQ++VGSNN+NLL P GQFG+ L
Sbjct: 668 KRNLTNEMKVAQFSGYVAEHSGYHHGEQSLQGAIVGMAQDYVGSNNMNLLLPNGQFGSRL 727
Query: 191 F 191
Sbjct: 728 L 728
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 12/129 (9%)
Query: 219 DYKEYHTDTTVKFVVTMS--PDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
D++E HT+ V F + S PD + KL+ + ++M AFD G + K+
Sbjct: 882 DFREKHTEKNVMFEIDYSGEPD----------ISILKLEKVIRTTNMHAFDPQGKIKKYA 931
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
I+++++ VR E+Y KRK+YL L +A N+ RFI + +L + + + +
Sbjct: 932 DPLDIIRDWFEVRREFYTKRKNYLLKDLSHKAAIAENKHRFITLIVNDELVLSKKTESVI 991
Query: 337 IAELIKRKY 345
++EL K+
Sbjct: 992 LSELRTLKF 1000
>gi|448934521|gb|AGE58074.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus NW665.2]
Length = 1058
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 118/181 (65%), Gaps = 13/181 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS++AK+YF N++ +F ++ D+ + I +F+K DERKTWL +
Sbjct: 561 GLGTSTSEDAKKYFKNLKSLVKIFGWTEDSGEL-IDRSFNKSRPDERKTWLLDFQP---- 615
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G +KT I +F++KELILFS D ERSIPS+ DGLKP RK+LF
Sbjct: 616 ------GNQLDQSKTN--IPVPDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFAAF 667
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN E+KVAQ +G VAEHS YHHGEQSL I+ +AQ++VGSNN+NLL P GQFG+ L
Sbjct: 668 KRNLTNEMKVAQFSGYVAEHSGYHHGEQSLQGAIVGMAQDYVGSNNMNLLLPNGQFGSRL 727
Query: 191 F 191
Sbjct: 728 L 728
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 12/129 (9%)
Query: 219 DYKEYHTDTTVKFVVTMS--PDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
D++E HT+ V F + S PD + KL+ + ++M AFD G + K+
Sbjct: 882 DFREKHTEKNVLFEIDYSGEPD----------LSILKLEKVIRTTNMHAFDPQGKIKKYA 931
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
+ I+++++ VR E+Y KRK+YL L +A N+ RFI + +L + + + +
Sbjct: 932 CSLDIIRDWFEVRREFYTKRKNYLLKDLSHKAAIAENKHRFITLIVNDELVLSKKTESVI 991
Query: 337 IAELIKRKY 345
++EL K+
Sbjct: 992 LSELRTLKF 1000
>gi|155122232|gb|ABT14100.1| hypothetical protein MT325_M546R [Paramecium bursaria chlorella
virus MT325]
Length = 1058
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 117/178 (65%), Gaps = 13/178 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS++AK+YF N++ +F ++ D+ + I +F+K DERKTWL +
Sbjct: 561 GLGTSTSEDAKKYFKNLKSLVKIFGWTEDSGEL-IDRSFNKSRPDERKTWLLDFQP---- 615
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G +KT I +F++KELILFS D ERSIPS+ DGLKP RK+LF
Sbjct: 616 ------GNQLDQSKTN--IPVPDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFAAF 667
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN E+KVAQ +G VAEHS YHHGEQSL I+ +AQ++VGSNN+NLL P GQFG+
Sbjct: 668 KRNLTNEMKVAQFSGYVAEHSGYHHGEQSLQGAIVGMAQDYVGSNNMNLLLPNGQFGS 725
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 219 DYKEYHTDTTVKFVVTMS--PDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
D++E HT+ V F + PD + KL+ + ++M AFD G + K+
Sbjct: 882 DFREKHTEKNVLFEIDFPGEPD----------LSILKLEKAIRTTNMHAFDPEGKIKKYA 931
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
I+ +++ VR +Y KRK+YL L +A N+ RFI + +L + + + +
Sbjct: 932 DPLDIILDWFEVRKTFYTKRKNYLLKDLSHKAAIAENKHRFITLIVNDELVLSKKTESVI 991
Query: 337 IAELIKRKY 345
++EL K+
Sbjct: 992 LSELRTLKF 1000
>gi|448929697|gb|AGE53264.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus Fr5L]
Length = 1058
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 117/178 (65%), Gaps = 13/178 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS++AK+YF N++ +F ++ D+ + I +F+K DERKTWL +
Sbjct: 561 GLGTSTSEDAKKYFKNLKSLVKIFGWTEDSGEL-IDRSFNKSRPDERKTWLLDFQP---- 615
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G +KT I +F++KELILFS D ERSIPS+ DGLKP RK+LF
Sbjct: 616 ------GNQLDQSKTN--IPVPDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFAAF 667
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN E+KVAQ +G VAEHS YHHGEQSL I+ +AQ++VGSNN+NLL P GQFG+
Sbjct: 668 KRNLTNEMKVAQFSGYVAEHSGYHHGEQSLQGAIVGMAQDYVGSNNMNLLLPNGQFGS 725
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 12/129 (9%)
Query: 219 DYKEYHTDTTVKFVV--TMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
D++E HT+ V F + T PD + KL+ + ++M AFD G + K+
Sbjct: 882 DFREKHTEKNVLFEIDYTGEPD----------ISILKLEKVIRTTNMHAFDPQGKIKKYA 931
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
+ I+++++ VR +Y KRK+YL L +A N+ RFI + +L + + + +
Sbjct: 932 CSLDIIRDWFEVRKTFYTKRKNYLLKDLSHKAAIAENKHRFITLIVNDELVLSKKTESVI 991
Query: 337 IAELIKRKY 345
++EL K+
Sbjct: 992 LSELRTLKF 1000
>gi|300176630|emb|CBK24295.2| unnamed protein product [Blastocystis hominis]
Length = 1173
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 117/181 (64%), Gaps = 14/181 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KE KEYFSN++RH + F ++ I M F + +ERK W+ + E
Sbjct: 620 GLGTSTAKEGKEYFSNLDRHVLPFAPLTSSESNLIDMCFKRSRCEERKEWIDGFDPES-- 677
Query: 71 RKEMGIGEDYL-YTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
Y+ Y K+ ++ +F+NKELI FS D RSIPS+ DGLKP RKVL C
Sbjct: 678 ---------YIDYEKS--PVSIYDFINKELIQFSRQDCIRSIPSMIDGLKPSQRKVLHGC 726
Query: 130 LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTF 189
++RN +E+KV QL+G ++E YHHGEQSL TII++AQ+FVGSNN+N L P GQFGT
Sbjct: 727 IQRNLTKEIKVVQLSGYISESVLYHHGEQSLNQTIISMAQDFVGSNNMNFLVPNGQFGTR 786
Query: 190 L 190
L
Sbjct: 787 L 787
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 2/123 (1%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLH--KAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
++E HTDT V F VT+ +K K + L K +L +L S+ F+ G + +
Sbjct: 945 FRENHTDTEVMFTVTVKKEKAAELKENREKLMKDLRLIGSLTTSNFILFNSKGHIHHYKD 1004
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
N+I++EF RL +Y +R++ L L + L N++ FI DG L + +R K++I
Sbjct: 1005 ANEIMEEFIEFRLPFYQQRRENLMKQLDKKCKLLENKSNFIQHVVDGSLVLHDRPIKKVI 1064
Query: 338 AEL 340
+++
Sbjct: 1065 SDM 1067
>gi|321473423|gb|EFX84390.1| hypothetical protein DAPPUDRAFT_30330 [Daphnia pulex]
Length = 547
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 119/178 (66%), Gaps = 2/178 (1%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GL T +E KE FSN++RH+I F++ GD+DD I MAF+ K ++E + L W C+
Sbjct: 8 GLETLRKEEVKECFSNLQRHQIDFRHGGDDDDRAISMAFNNKHLEEWRYRLNVWKNACKD 67
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+++G D LY K K ++Y +FV K+LI F NM+ RS+PS+ DG RK L+TC+
Sbjct: 68 LRQLGFSGD-LYAKDIKEVSYHDFVKKDLIRFRNMEYVRSVPSIMDGFNERQRKTLYTCI 126
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR+ + E+ VAQLA SVAE+ AY+ + L+ TI LAQ+FVGSNNINLL P GQF +
Sbjct: 127 KRDYKEEINVAQLAVSVAENCAYYQPDL-LIGTITGLAQDFVGSNNINLLIPNGQFAS 183
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 106/191 (55%), Gaps = 2/191 (1%)
Query: 170 NFVGSNNINLLQPIGQFGTFLFI-FESTNLSGAVVNALDFGSGGWRFESNDYKEYHTDTT 228
NFV S + +L P T L + + N +V+ L GS DY+E+HTD
Sbjct: 297 NFVISGELAVLSPTTIEITELPVDVPTENYKKSVLEKLLCGSEECPPIITDYQEHHTDNN 356
Query: 229 VKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAV 288
V+FVVTM+ + + E +G H+ FKLQ+ ++ SM +D G L +++ + I+ EFY V
Sbjct: 357 VRFVVTMTEKMMQQVESEGFHRAFKLQSVYSLRSMLLYDSNGSLKTYNSVDDIMNEFYEV 416
Query: 289 RLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKE-MIAELIKRKYDS 347
RLE Y KR+DY G + A +L NQ F+ E L +++ KK + ++ EL +R Y
Sbjct: 417 RLELYRKRRDYFSGKVEALRARLVNQNNFLTEISSKVLIVDSEKKFDVLLEELRRRNYAP 476
Query: 348 DPVKSWKMKQN 358
DP+ +W+ K N
Sbjct: 477 DPLIAWEKKSN 487
>gi|321473409|gb|EFX84376.1| hypothetical protein DAPPUDRAFT_670 [Daphnia pulex]
Length = 667
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 119/178 (66%), Gaps = 2/178 (1%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GL T +E KE FSN++RH+I F++ GD+DD I MAF+ K ++E + L W C+
Sbjct: 191 GLETLRKEEVKECFSNLQRHQIDFRHGGDDDDRAISMAFNNKHLEEWRYRLNVWKNACKD 250
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+++G D LY K K ++Y +FV K+LI F NM+ RS+PS+ DG RK L+TC+
Sbjct: 251 LRQLGFSGD-LYAKDIKEVSYHDFVKKDLIRFRNMEYVRSVPSIMDGFNERQRKTLYTCI 309
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR+ + E+ VAQLA SVAE+ AY+ + L+ TI LAQ+FVGSNNINLL P GQF +
Sbjct: 310 KRDYKEEINVAQLAVSVAENCAYYQPDL-LIGTITGLAQDFVGSNNINLLIPNGQFAS 366
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 103/188 (54%), Gaps = 1/188 (0%)
Query: 170 NFVGSNNINLLQPIGQFGTFLFI-FESTNLSGAVVNALDFGSGGWRFESNDYKEYHTDTT 228
NFV S + +L P T L + + N +V+ L GS DY+E+HTD
Sbjct: 480 NFVISGELAVLSPTTIEITELPVDVPTENYKKSVLEKLLCGSEECPPIITDYQEHHTDNN 539
Query: 229 VKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAV 288
V+FVVTM+ + + E +G H+ FKLQ+ ++ SM +D G L +++ + I+ EFY V
Sbjct: 540 VRFVVTMTEKMMQQVESEGFHRAFKLQSVYSLRSMLLYDSNGSLKTYNSVDDIMNEFYEV 599
Query: 289 RLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKYDSD 348
RLE Y KR+DY G + A +L NQ F+ E L +++ K ++ EL +R Y D
Sbjct: 600 RLELYRKRRDYFSGKVEALRARLVNQNNFLTEISSKVLIVDSEKFDVLLEELRRRNYAPD 659
Query: 349 PVKSWKMK 356
P+ +W+ K
Sbjct: 660 PLIAWEKK 667
>gi|254580647|ref|XP_002496309.1| ZYRO0C15422p [Zygosaccharomyces rouxii]
gi|238939200|emb|CAR27376.1| ZYRO0C15422p [Zygosaccharomyces rouxii]
Length = 1427
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 115/178 (64%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ +EA++YFS+++RH F + + I +AFSKK D+RK WL R
Sbjct: 603 GLGTSSGQEARQYFSDLDRHLKRFHALQEGEQDLIDLAFSKKKADDRKEWL--------R 654
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D T+ I ++F+NKELILFS DN RSIP++ DG KPG RKV++
Sbjct: 655 QYEPGTVLDPRLTE----IPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVIYGSF 710
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN E+K++ LA VAE + YHHG SL TII LAQ+FVGSNNI +L PIG FGT
Sbjct: 711 KRNITSEIKISTLANYVAEQTDYHHGPDSLAQTIIGLAQSFVGSNNIYVLNPIGSFGT 768
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 83/122 (68%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H + ++FVV ++ +++ K + G ++ FKL +T+++++M AFD +G + K++
Sbjct: 931 DLEEQHGNG-IRFVVRLTQEEMDKTRVMGFYERFKLISTISLNNMVAFDPHGKIKKYENV 989
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
++IL EFY VRLEYY KRKDY+ L E KL+ Q +FI +G++ I NR +K++IA
Sbjct: 990 SEILTEFYYVRLEYYQKRKDYMSERLQWEVEKLSFQIKFIKLIIEGEMSITNRPRKQIIA 1049
Query: 339 EL 340
+L
Sbjct: 1050 DL 1051
>gi|448932168|gb|AGE55728.1| DNA topoisomerase II [Acanthocystis turfacea Chlorella virus
MN0810.1]
Length = 1056
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 119/182 (65%), Gaps = 13/182 (7%)
Query: 9 IAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEEC 68
+ GLGTSTS++AK YF N++ +F ++ D+ + I +F+K DERKTWL +
Sbjct: 557 LKGLGTSTSEDAKRYFKNLKGLTKVFGWTDDSSEL-IDRSFNKSRADERKTWLLDF---- 611
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
E G D TK I +F++KELILFS D ERSIPS+ DGLKP RK+LF+
Sbjct: 612 ----EPGNQIDQTLTK----IPMDDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFS 663
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+N E KVAQ +G V+EH+ YHHGE SL I+++AQ++VGSNNINLL P GQFG+
Sbjct: 664 AFKKNLTSETKVAQFSGYVSEHAGYHHGEVSLQGAIVSMAQDYVGSNNINLLLPRGQFGS 723
Query: 189 FL 190
L
Sbjct: 724 RL 725
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 200 GAVVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDK------LHKAEMDGLH--KV 251
G + + G W +N+YKE+ K +V +K L + + G+ K+
Sbjct: 848 GKTITVSELPIGSW---TNEYKEFLESLIEKKIVADFREKHDEKNVLFEIDFIGVPDPKI 904
Query: 252 FKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKL 311
KL++T+ ++M AFD+ + K+D+ I+ +++ VR E+Y KRK+YL L L
Sbjct: 905 LKLESTIRTTNMHAFDKNSRIRKYDSPLDIITDWFEVRKEFYVKRKNYLIKDLKERVLVA 964
Query: 312 TNQARFIVEKCDGDLRIENRKKKEMIAELIKRKYD 346
N+ +FI DG L I R ++++I +L K K+D
Sbjct: 965 RNKHKFISSVNDGVLVITRRMEEDVIKDLNKMKFD 999
>gi|448926664|gb|AGE50240.1| DNA topoisomerase II [Acanthocystis turfacea Chlorella virus
Canal-1]
Length = 1058
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 118/182 (64%), Gaps = 17/182 (9%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDA--HIRMAFSKKLVDERKTWLTTWMEEC 68
GLGTS + +AK YF+N+ ++L K +DDA I +F+K DERKTWL +
Sbjct: 561 GLGTSDANDAKRYFNNL---KVLVKTLTWSDDAAESIDKSFNKSRADERKTWLLDF---- 613
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
E G D TK I +F+NK+LILFS D ERSIPS+ DGLKP RK+LF+
Sbjct: 614 ----EPGNQLDQKLTK----IPVEDFINKDLILFSRYDVERSIPSVVDGLKPSQRKILFS 665
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN E+KVAQ AG V+EH+ YHHGE SL I+++AQ++VGSNNINLL P GQFG+
Sbjct: 666 AFKRNLTSEIKVAQFAGYVSEHAGYHHGEASLQGAIVSIAQDYVGSNNINLLVPKGQFGS 725
Query: 189 FL 190
L
Sbjct: 726 RL 727
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 11/157 (7%)
Query: 198 LSGAVVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDK------LHKAEMDGLH-- 249
+ G V + G W +NDYKE+ K +V +K L + + G+
Sbjct: 848 IKGKTVTVSELPVGTW---TNDYKEFIETLVEKKIVADFREKHDEKHVLFEIDFTGVPDP 904
Query: 250 KVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEAL 309
K+ KL+ T+ ++M AFD G + K+DT I+ ++++ R ++Y KRK+ + L A L
Sbjct: 905 KILKLEGTIRTTNMHAFDPAGKIKKYDTPLDIIADWFSTRKKFYVKRKEDMLKDLKARVL 964
Query: 310 KLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKYD 346
N++RFI DG L I R + +++ +L K K+D
Sbjct: 965 VAQNKSRFINSVNDGTLVITRRAEDDVVKDLKKMKFD 1001
>gi|448925985|gb|AGE49563.1| DNA topoisomerase II [Acanthocystis turfacea Chlorella virus
Can0610SP]
Length = 1058
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 118/182 (64%), Gaps = 17/182 (9%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDA--HIRMAFSKKLVDERKTWLTTWMEEC 68
GLGTS + +AK YF+N+ ++L K +DDA I +F+K DERKTWL +
Sbjct: 561 GLGTSDANDAKRYFNNL---KVLVKTLTWSDDAAESIDKSFNKSRADERKTWLLDFKPGN 617
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
+ L K TK I +F+NK+LILFS D ERSIPS+ DGLKP RK+LF+
Sbjct: 618 Q-----------LDQKLTK-IPVEDFINKDLILFSRYDVERSIPSVVDGLKPSQRKILFS 665
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN +E+KVAQ AG V+EH+ YHHGE SL I+ +AQ++VGSNNINLL P GQFG+
Sbjct: 666 AFKRNLVQEIKVAQFAGYVSEHAGYHHGEASLQGAIVGMAQDYVGSNNINLLAPKGQFGS 725
Query: 189 FL 190
L
Sbjct: 726 RL 727
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 12/130 (9%)
Query: 219 DYKEYHTDTTVKFVVTM--SPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
D++E H +T V F + PD K+ KL +T+ ++M AFD G + K+D
Sbjct: 882 DFREKHDETNVLFEIDFIGVPDP----------KILKLDSTIRTTNMHAFDPEGKIKKYD 931
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
+ I+ +++A R E+Y KRK+ L L A L N++RFI DG L I R ++++
Sbjct: 932 SPLDIITDWFATRKEFYIKRKEDLLKDLKARVLVAKNKSRFITSVNDGTLIITRRAEEDV 991
Query: 337 IAELIKRKYD 346
I +L K K+D
Sbjct: 992 IKDLNKMKFD 1001
>gi|448933153|gb|AGE56710.1| DNA topoisomerase II [Acanthocystis turfacea Chlorella virus
NE-JV-2]
Length = 1058
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 119/182 (65%), Gaps = 17/182 (9%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDA--HIRMAFSKKLVDERKTWLTTWMEEC 68
GLGTS S +AK YF+N+ ++L K +DDA I +F+K DERKTWL +
Sbjct: 561 GLGTSDSNDAKRYFNNL---KVLVKTLTWSDDAAESIDKSFNKSRADERKTWLLDFKPGN 617
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
+ L K TK I +F+NK+LILFS D ERSIPS+ DGLKP RK+LF+
Sbjct: 618 Q-----------LDQKLTK-IPVEDFINKDLILFSRYDVERSIPSVVDGLKPSQRKILFS 665
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+RN +E+KVAQ AG V+EH+ YHHGE SL I+++AQ++VGSNNINLL P GQFG+
Sbjct: 666 AFRRNLVQEIKVAQFAGYVSEHAGYHHGEASLQGAIVSMAQDYVGSNNINLLVPKGQFGS 725
Query: 189 FL 190
L
Sbjct: 726 RL 727
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D++E H +T V F ++ + D +D K+ KL++T+ ++M AFD G + K+D+
Sbjct: 882 DFREKHDETNVHFEISFTND------VD--PKILKLESTIRTTNMHAFDPAGKIKKYDSP 933
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I+ ++++ R E+Y KRK+ L L A L N++RFI DG L I R ++++I
Sbjct: 934 LDIITDWFSTRKEFYIKRKEDLLKDLKARVLVAQNKSRFITSVNDGTLIITRRAEEDVIK 993
Query: 339 ELIKRKYD 346
+L K K+D
Sbjct: 994 DLGKLKFD 1001
>gi|402591390|gb|EJW85319.1| DNA topoisomerase 2 [Wuchereria bancrofti]
Length = 852
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 129/188 (68%), Gaps = 25/188 (13%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTW--------LT 62
GLGTS++KEA+EYF+++ERH I F Y G D I +AF+K D+RK W L+
Sbjct: 665 GLGTSSAKEAREYFNDIERHTINFIYDGKASDESIELAFAKNKADDRKVWIAESSKLLLS 724
Query: 63 TWMEECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGS 122
T ++ R +K T++EFVN+EL+ +S +D RS+P++ DGLKP
Sbjct: 725 TAVDSNRNQK-----------------TFSEFVNEELVEYSQLDLRRSLPNVVDGLKPSQ 767
Query: 123 RKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQP 182
RKVLFT +R +R EV+V+QLAG+V+++ YHHGE+SL++TI+ LAQ+FVGSNN+NLL P
Sbjct: 768 RKVLFTMFERYERGEVRVSQLAGAVSQYCGYHHGEESLVNTIVRLAQDFVGSNNLNLLLP 827
Query: 183 IGQFGTFL 190
+GQFGT L
Sbjct: 828 LGQFGTRL 835
>gi|448934962|gb|AGE58514.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus NY-2B]
Length = 1062
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 118/180 (65%), Gaps = 13/180 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+S +AK+YFSN++ F ++ D+ + I +F+K ++RK W+T +
Sbjct: 566 GLGTSSSADAKKYFSNLKSLMKTFMWTSDSGEL-IDRSFNKSRAEDRKEWMTAY------ 618
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D+ + +F++KELILFS D ERSIPS+ DG KP RKVL++
Sbjct: 619 --EPGNQLDH----KKPEVPVPDFIDKELILFSRYDLERSIPSVVDGFKPSQRKVLYSAF 672
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +VKVAQ +G VAEHSAYHHGE SL TI+NLAQ++VGSNNIN L P GQFG+ L
Sbjct: 673 KRNLTTDVKVAQFSGYVAEHSAYHHGEASLQGTIVNLAQDYVGSNNINWLLPEGQFGSRL 732
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 72/128 (56%), Gaps = 8/128 (6%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+D++E HTDT V F + D + +D + KL+TT+ ++M AFD YG + K+DT
Sbjct: 886 SDFREKHTDTDVLFEI----DFVGNPNID----ILKLETTIRSTNMHAFDPYGKIKKYDT 937
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
I++E++ VR + Y KRK YL L N+ RFI DG++ I R + ++
Sbjct: 938 PLDIIREWFGVRKDLYVKRKAYLLEDLTHRTNIAQNKYRFITMVNDGEIIINKRNESDIS 997
Query: 338 AELIKRKY 345
AEL K K+
Sbjct: 998 AELEKLKF 1005
>gi|155370647|ref|YP_001426181.1| hypothetical protein FR483_N549R [Paramecium bursaria Chlorella
virus FR483]
gi|155123967|gb|ABT15834.1| hypothetical protein FR483_N549R [Paramecium bursaria Chlorella
virus FR483]
Length = 1058
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 118/181 (65%), Gaps = 13/181 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS++AK+YF N++ +F ++ D+ + I +F+K DERKTWL +
Sbjct: 561 GLGTSTSEDAKKYFKNLKSLVKIFGWTEDSGEL-IDRSFNKSRPDERKTWLLDFQP---- 615
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G +KT I +F++KELILFS D ERSIPS+ DGLKP RK+LF
Sbjct: 616 ------GNQLDQSKTN--IPVPDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFAAF 667
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +E+KVAQ +G V+E S YHHGEQSL I+ +AQ++VGSNN+NLL P GQFG+ L
Sbjct: 668 KRNLVQEIKVAQFSGYVSEISGYHHGEQSLQGAIVGMAQDYVGSNNMNLLLPNGQFGSRL 727
Query: 191 F 191
Sbjct: 728 L 728
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 13/133 (9%)
Query: 219 DYKEYHTDTTVKFVVTMS--PDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
D++E HT+ V F + S PD + KL+ + ++M AFD G + K+
Sbjct: 882 DFREKHTEKNVLFEIDYSGEPD----------ISILKLEKVIRTTNMHAFDPQGKIKKYA 931
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
+ I+++++ VR +Y KRK YL L +A N+ RFI + +L + + + +
Sbjct: 932 CSLDIIRDWFEVRKTFYTKRKAYLIKDLSHKAAIAENKHRFITLIVNDELVLSKKTESVI 991
Query: 337 IAELIKRK-YDSD 348
++EL K Y SD
Sbjct: 992 LSELRTLKFYKSD 1004
>gi|357289588|gb|AET72901.1| DNA topoisomerase IIB [Phaeocystis globosa virus 12T]
gi|357292383|gb|AET73719.1| DNA topoisomerase IIB [Phaeocystis globosa virus 14T]
Length = 1153
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 114/181 (62%), Gaps = 15/181 (8%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKE KEYF ++ +++ S D I M F+KK +RK WL+ +
Sbjct: 599 GLGTSTSKEFKEYF---QKKKVVNFTSSDKCSDSIDMVFNKKRAHDRKDWLSNYDRSA-- 653
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
YL T T ++TY EF+N +L FS DN+RSIP++CDGLK RK++++
Sbjct: 654 ---------YLDTDKT-SVTYDEFINDDLRHFSTYDNDRSIPNICDGLKISLRKIVYSAF 703
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
K+ E+KVAQ +G V+EHS YHHGE SL I+ LAQNFVGSNNINL QP GQFGT L
Sbjct: 704 KKKLHSEIKVAQFSGYVSEHSGYHHGEASLNGAIVGLAQNFVGSNNINLFQPNGQFGTRL 763
Query: 191 F 191
Sbjct: 764 M 764
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKL-------HKAEMDGLHKVFKLQTTLAISSMCAFDRYGV 271
DY + T+ V+F++ P + H+ ++G+ KL TT + ++M F+ G
Sbjct: 924 DYSDMSTEANVEFIIQFYPGIISKLLSEKHEYGLEGIEHYLKLSTTQSTTNMHLFNPKGK 983
Query: 272 LTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENR 331
LTK+DT I+ E+Y++RLEYY KRK YL +L E L+N+ ++I + + + +
Sbjct: 984 LTKYDTIYSIVDEYYSIRLEYYNKRKAYLIELLTKELATLSNKTKYITGVLNDTIDLRKK 1043
Query: 332 KKKEMIAELIKRKYDSD 348
K E+ + L + +D D
Sbjct: 1044 SKDEIYSLLEGKNFDKD 1060
>gi|448928070|gb|AGE51642.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus CviKI]
Length = 1064
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 117/180 (65%), Gaps = 13/180 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+S +AK YFSN++ F ++ D+ + I +F+K ++RK W+T +
Sbjct: 566 GLGTSSSTDAKHYFSNLKSLMKTFTWTSDSGEL-IDRSFNKSRAEDRKEWMTAY------ 618
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D+ + +F++KELILFS D ERSIPS+ DG KP RKVL++
Sbjct: 619 --EPGDQLDH----KKPEVPVPDFIDKELILFSRYDLERSIPSVVDGFKPSQRKVLYSAF 672
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +VKVAQ +G VAEHSAYHHGE SL TI+NLAQ++VGSNNIN L P GQFG+ L
Sbjct: 673 KRNLTTDVKVAQFSGYVAEHSAYHHGEVSLQGTIVNLAQDYVGSNNINWLLPEGQFGSRL 732
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 8/125 (6%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+D++E H+DT V F + D + +D + KL+TT+ ++M AFD G + K+DT
Sbjct: 886 SDFREKHSDTDVLFEI----DFVGNPNID----ILKLETTIRSTNMHAFDPSGKIKKYDT 937
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
I+++++ VR Y KRK YL L N+ RFI + ++ I + + +
Sbjct: 938 PLDIIRDWFEVRRNLYVKRKAYLLEDLTHRTNIAQNKHRFITMVNNDEIVINKKHESVIS 997
Query: 338 AELIK 342
AEL K
Sbjct: 998 AELEK 1002
>gi|448926329|gb|AGE49906.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus Can18-4]
Length = 1058
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 117/178 (65%), Gaps = 13/178 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS++AK+YF N++ +F ++ D+ + I +F+K DERKTWL +
Sbjct: 561 GLGTSTSEDAKKYFKNLKSLVKIFGWTEDSGEL-IDRSFNKSRPDERKTWLLDFQP---- 615
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G +KT I +F++KELILFS D ERSIPS+ DGLKP RK+LF
Sbjct: 616 ------GNQLDQSKTN--IPVPDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFAAF 667
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN +E+KVAQ +G V+E S YHHGEQSL I+ +AQ++VGSNN+NLL P GQFG+
Sbjct: 668 KRNLVQEIKVAQFSGYVSEISGYHHGEQSLQGAIVGMAQDYVGSNNMNLLLPNGQFGS 725
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 12/129 (9%)
Query: 219 DYKEYHTDTTVKFVVTMS--PDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
D++E HT+ V F + S PD + KL+ + ++M AFD G + K+
Sbjct: 882 DFREKHTEKNVLFEIDYSGEPD----------ISILKLEKVIRTTNMHAFDPQGKIKKYA 931
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
I+++++ VR E+Y KRK YL L +A N+ RFI + +L + + + +
Sbjct: 932 DPLDIIRDWFEVRREFYTKRKAYLIKDLSHKAAIAENKHRFITLIVNDELVLSKKTESVI 991
Query: 337 IAELIKRKY 345
++EL K+
Sbjct: 992 LSELRTLKF 1000
>gi|157953897|ref|YP_001498788.1| hypothetical protein AR158_C707L [Paramecium bursaria Chlorella
virus AR158]
gi|156068545|gb|ABU44252.1| hypothetical protein AR158_C707L [Paramecium bursaria Chlorella
virus AR158]
Length = 1062
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 118/180 (65%), Gaps = 13/180 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+S +AK+YFSN++ F ++ D+ + I +F+K ++RK W+T +
Sbjct: 566 GLGTSSSADAKKYFSNLKSLMKTFMWTSDSGEL-IDRSFNKSRAEDRKEWMTAY------ 618
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D+ + +F++KELILFS D ERSIPS+ DG KP RKV+++
Sbjct: 619 --EPGNQLDH----KKPEVPVPDFIDKELILFSRYDLERSIPSVVDGFKPSQRKVIYSAF 672
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +VKVAQ +G VAEHSAYHHGE SL TI+NLAQ++VGSNNIN L P GQFG+ L
Sbjct: 673 KRNLTTDVKVAQFSGYVAEHSAYHHGEASLQGTIVNLAQDYVGSNNINWLLPEGQFGSRL 732
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 72/128 (56%), Gaps = 8/128 (6%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+D++E HTDT V F + D + +D + KL+TT+ ++M AFD YG + K+DT
Sbjct: 886 SDFREKHTDTDVLFEI----DFIGNPNVD----ILKLETTIRSTNMHAFDPYGKIKKYDT 937
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
I++E++ VR + Y KRK YL L N+ RFI DG++ I R + ++
Sbjct: 938 PLDIIREWFGVRKDLYVKRKAYLLEDLTHRTNIAQNKYRFITMVNDGEIIINKRNESDIS 997
Query: 338 AELIKRKY 345
AEL K K+
Sbjct: 998 AELEKLKF 1005
>gi|448929090|gb|AGE52659.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus CvsA1]
Length = 1064
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 117/180 (65%), Gaps = 13/180 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+S +AK YFSN++ F ++ D+ + I +F+K ++RK W+T +
Sbjct: 566 GLGTSSSTDAKHYFSNLKSLMKTFTWTSDSGEL-IDRSFNKTRAEDRKEWMTAY------ 618
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D+ + +F++KELILFS D ERSIPS+ DG KP RKVL++
Sbjct: 619 --EPGNQLDH----KKPEVPVPDFIDKELILFSRYDLERSIPSVVDGFKPSQRKVLYSAF 672
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +VKVAQ +G VAEHSAYHHGE SL TI+NLAQ++VGSNNIN L P GQFG+ L
Sbjct: 673 KRNLTTDVKVAQFSGYVAEHSAYHHGEVSLQGTIVNLAQDYVGSNNINWLLPEGQFGSRL 732
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 8/125 (6%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+D++E H+DT V F + D + +D + KL+TT+ ++M AFD G + K+DT
Sbjct: 886 SDFREKHSDTDVLFEI----DFVGNPNID----ILKLETTIRSTNMHAFDPSGKIKKYDT 937
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
I+++++ VR Y KRK YL L N+ RFI + ++ I + + +
Sbjct: 938 PLDIIRDWFEVRRNLYVKRKAYLLEDLTHRTNIAQNKHRFITMVNNDEIIINKKHESVIS 997
Query: 338 AELIK 342
AEL K
Sbjct: 998 AELEK 1002
>gi|448924953|gb|AGE48534.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus AN69C]
gi|448933895|gb|AGE57450.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus NE-JV-4]
Length = 1064
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 117/180 (65%), Gaps = 13/180 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+S +AK YFSN++ F ++ D+ + I +F+K ++RK W+T +
Sbjct: 566 GLGTSSSTDAKHYFSNLKSLMKTFTWTSDSGEL-IDRSFNKTRAEDRKEWMTAY------ 618
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D+ + +F++KELILFS D ERSIPS+ DG KP RKVL++
Sbjct: 619 --EPGNQLDH----KKPEVPVPDFIDKELILFSRYDLERSIPSVVDGFKPSQRKVLYSAF 672
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +VKVAQ +G VAEHSAYHHGE SL TI+NLAQ++VGSNNIN L P GQFG+ L
Sbjct: 673 KRNLTTDVKVAQFSGYVAEHSAYHHGEVSLQGTIVNLAQDYVGSNNINWLLPEGQFGSRL 732
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 8/125 (6%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+D++E H+DT V F + D + +D + KL+TT+ ++M AFD G + K+DT
Sbjct: 886 SDFREKHSDTDVLFEI----DFVGNPNID----ILKLETTIRSTNMHAFDPSGKIKKYDT 937
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
I+++++ VR Y KRK YL L N+ RFI + ++ I + + +
Sbjct: 938 PLDIIRDWFEVRRNLYVKRKAYLLEDLTHRTNIAQNKHRFITMVNNDEIVINKKHESVIS 997
Query: 338 AELIK 342
AEL K
Sbjct: 998 AELEK 1002
>gi|157953085|ref|YP_001497977.1| hypothetical protein NY2A_B781L [Paramecium bursaria Chlorella
virus NY2A]
gi|155123312|gb|ABT15180.1| hypothetical protein NY2A_B781L [Paramecium bursaria Chlorella
virus NY2A]
Length = 1061
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 118/180 (65%), Gaps = 13/180 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+S +AK+YFSN++ F ++ D+ + I +F+K ++RK W+T +
Sbjct: 566 GLGTSSSADAKKYFSNLKSLMKTFMWTSDSGEL-IDRSFNKSRAEDRKEWMTAY------ 618
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D+ + +F++KELILFS D ERSIPS+ DG KP RKV+++
Sbjct: 619 --EPGNQLDH----KKPEVPVPDFIDKELILFSRYDLERSIPSVVDGFKPSQRKVIYSAF 672
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +VKVAQ +G VAEHSAYHHGE SL TI+NLAQ++VGSNNIN L P GQFG+ L
Sbjct: 673 KRNLTTDVKVAQFSGYVAEHSAYHHGEASLQGTIVNLAQDYVGSNNINWLLPEGQFGSRL 732
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 69/128 (53%), Gaps = 8/128 (6%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+D++E H+DT V F + D + +D + KL+TT+ ++M AFD G + K+DT
Sbjct: 886 SDFREKHSDTDVLFEI----DFVGNPNID----ILKLETTIRSTNMHAFDPSGKIKKYDT 937
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
I++E++ VR + Y KRK YL L N+ RFI + ++ I + + +
Sbjct: 938 PLDIIREWFGVRKDLYVKRKAYLLEDLTHRTNIAQNKHRFITMVNNDEIIINKKHESVIS 997
Query: 338 AELIKRKY 345
AEL K K+
Sbjct: 998 AELEKLKF 1005
>gi|448932485|gb|AGE56044.1| DNA topoisomerase II [Acanthocystis turfacea Chlorella virus
MO0605SPH]
Length = 1058
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 117/182 (64%), Gaps = 17/182 (9%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDA--HIRMAFSKKLVDERKTWLTTWMEEC 68
GLGTS S +AK YF+N+ ++L K +DDA I +F+K DERKTWL +
Sbjct: 561 GLGTSDSNDAKRYFNNL---KVLVKTLTWSDDAAESIDKSFNKSRADERKTWLLDFKPGN 617
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
+ L K TK I +F+NK+LILFS D ERSIPS+ DGLKP RK+LF+
Sbjct: 618 Q-----------LDQKLTK-IPVEDFINKDLILFSRYDVERSIPSVVDGLKPSQRKILFS 665
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+RN E+KVAQ +G V+EH+ YHHGE SL I+ +AQ++VGSNNINLL P GQFG+
Sbjct: 666 AFRRNLTSEIKVAQFSGYVSEHAGYHHGEASLQGAIVGMAQDYVGSNNINLLAPKGQFGS 725
Query: 189 FL 190
L
Sbjct: 726 RL 727
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 73/128 (57%), Gaps = 8/128 (6%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D++E H + V F + + D +D K+ KL++T+ ++M AFD G + K+D+
Sbjct: 882 DFREKHDEKNVNFEIMFTND------VD--PKILKLESTIRTTNMHAFDPSGKIKKYDSP 933
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
I+ +++A R E+Y KRK+ + L + L N++RFI DG L I R +++++
Sbjct: 934 LDIIADWFATRKEFYVKRKEDMLKDLKSRVLVAQNKSRFINSVNDGSLVITRRAEEDVVK 993
Query: 339 ELIKRKYD 346
+L K K+D
Sbjct: 994 DLKKMKFD 1001
>gi|448931515|gb|AGE55077.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus MA-1D]
Length = 1062
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 116/180 (64%), Gaps = 13/180 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+S +AK YFSN++ F ++ D+ + I +F+K ++RK W+T +
Sbjct: 567 GLGTSSSTDAKHYFSNLKSLMKTFMWTSDSGEL-IDRSFNKSRAEDRKEWMTAY------ 619
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D+ + +F++KELILFS D ERSIPS+ DG KP RKVL+
Sbjct: 620 --EPGNQLDH----KKPEVPVPDFIDKELILFSRYDLERSIPSVVDGFKPSQRKVLYCAF 673
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +VKVAQ +G VAEHSAYHHGE SL TI+NLAQ++VGSNNIN L P GQFG+ L
Sbjct: 674 KRNLTTDVKVAQFSGYVAEHSAYHHGEASLQGTIVNLAQDYVGSNNINWLLPEGQFGSRL 733
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 71/128 (55%), Gaps = 8/128 (6%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+D++E HTDT V F + D + +D + KL+TT+ ++M AFD YG + K+DT
Sbjct: 887 SDFREKHTDTDVLFEI----DFVGNPNID----ILKLETTIRATNMHAFDPYGKIKKYDT 938
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
I++E++ VR + Y KRK YL L N+ RFI DG++ I R + ++
Sbjct: 939 PLDIIREWFGVRKDLYVKRKAYLLEDLTHRTNIAQNKYRFITMVNDGEIIINKRNESDIS 998
Query: 338 AELIKRKY 345
AEL K +
Sbjct: 999 AELEKLNF 1006
>gi|448930832|gb|AGE54396.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus IL-5-2s1]
Length = 1063
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 116/180 (64%), Gaps = 13/180 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+S +AK YFSN++ F ++ D+ + I +F+K ++RK W+T +
Sbjct: 567 GLGTSSSTDAKHYFSNLKTLMKTFTWTSDSGEL-IDRSFNKTRAEDRKEWMTAY------ 619
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D+ + +F++KELILFS D ERSIPS+ DG KP RKVL+
Sbjct: 620 --EPGNQLDH----KKPEVPVPDFIDKELILFSRYDLERSIPSVVDGFKPSQRKVLYCAF 673
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +VKVAQ +G VAEHSAYHHGE SL TI+NLAQ++VGSNNIN L P GQFG+ L
Sbjct: 674 KRNLTSDVKVAQFSGYVAEHSAYHHGEVSLQGTIVNLAQDYVGSNNINWLLPEGQFGSRL 733
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 8/128 (6%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+D++E H+DT V F + D + +D + KL+TT+ ++M AFD G + K+DT
Sbjct: 887 SDFREKHSDTDVLFEI----DFVGNPNID----ILKLETTIRSTNMHAFDPSGKIKKYDT 938
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
I+++++ VR + Y KRK YL L N+ RFI + ++ I + + +
Sbjct: 939 PLDIIRDWFEVRKDLYVKRKAYLLEDLTHRTNIAQNKHRFITMVNNDEIIINKKHESVIS 998
Query: 338 AELIKRKY 345
AEL K K+
Sbjct: 999 AELEKLKF 1006
>gi|340025908|ref|NP_048939.2| DNA topoisomerase II [Paramecium bursaria Chlorella virus 1]
gi|338222067|gb|AAC96932.2| DNA topoisomerase II [Paramecium bursaria Chlorella virus 1]
Length = 1061
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 116/180 (64%), Gaps = 13/180 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+S +AK YFSN++ F ++ D+ + I +F+K ++RK W+T +
Sbjct: 566 GLGTSSSTDAKHYFSNLKTLMKTFTWTSDSGEL-IDRSFNKTRAEDRKEWMTAY------ 618
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D+ + +F++KELILFS D ERSIPS+ DG KP RKVL+
Sbjct: 619 --EPGNQLDH----KKPEVPVPDFIDKELILFSRYDLERSIPSVVDGFKPSQRKVLYCAF 672
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +VKVAQ +G VAEHSAYHHGE SL TI+NLAQ++VGSNNIN L P GQFG+ L
Sbjct: 673 KRNLTSDVKVAQFSGYVAEHSAYHHGEVSLQGTIVNLAQDYVGSNNINWLLPEGQFGSRL 732
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 8/128 (6%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+D++E H+DT V F + D + +D + KL+TT+ ++M AFD G + K+DT
Sbjct: 886 SDFREKHSDTDVLFEI----DFVGNPNID----ILKLETTIRSTNMHAFDPSGKIKKYDT 937
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
I+++++ VR + Y KRK YL L N+ RFI + ++ I + + +
Sbjct: 938 PLDIIRDWFEVRKDLYVKRKAYLLEDLTHRTNIAQNKHRFITMVNNDEIIINKKHESVIS 997
Query: 338 AELIKRKY 345
AEL K +
Sbjct: 998 AELEKLNF 1005
>gi|50551479|ref|XP_503213.1| YALI0D23969p [Yarrowia lipolytica]
gi|49649081|emb|CAG81413.1| YALI0D23969p [Yarrowia lipolytica CLIB122]
Length = 1537
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 113/178 (63%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGT+ + +A EYF +++RH F D I +AFSKK D+RK WL R
Sbjct: 697 GLGTTPTADATEYFKDLDRHMKQFHAVTAEDRPFIELAFSKKKADDRKEWL--------R 748
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G +L K T I ++F+NKELILFS DN RSI S+CDG KPG RKVLF
Sbjct: 749 KYKPGT---HLDPKLTH-IPVSDFINKELILFSMADNMRSIASVCDGFKPGQRKVLFGSF 804
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR ++VAQL G ++EH+ YHHGE SL STI+ +AQ+F GSNNI L++P G FG+
Sbjct: 805 KRKFTVSIRVAQLVGYISEHTGYHHGEASLGSTIMAMAQDFAGSNNIYLMKPDGGFGS 862
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 79/134 (58%), Gaps = 4/134 (2%)
Query: 212 GWRFESNDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGV 271
GW D+ E H VKF +T+S ++ K GL + FKL ++L+ S+M AFD G
Sbjct: 1021 GW---IEDFTEDHG-FRVKFNITLSEKEMEKTRQIGLRERFKLISSLSTSNMVAFDPEGR 1076
Query: 272 LTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENR 331
+ K+D+ I+KE++ VRLE+Y KRKD L + KLT QARFI D L I N+
Sbjct: 1077 IKKYDSPEAIMKEYFPVRLEFYQKRKDRLVSDFEQQLEKLTAQARFIKLIIDKKLNINNK 1136
Query: 332 KKKEMIAELIKRKY 345
+K +IAEL + K+
Sbjct: 1137 GRKVLIAELSELKF 1150
>gi|170591240|ref|XP_001900378.1| DNA gyrase/topoisomerase IV, A subunit family protein [Brugia
malayi]
gi|158591990|gb|EDP30592.1| DNA gyrase/topoisomerase IV, A subunit family protein [Brugia
malayi]
Length = 1178
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/188 (47%), Positives = 128/188 (68%), Gaps = 25/188 (13%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTW--------LT 62
GLGTS++KEA+EYF+++ERH + F Y G D I +AF+K D+RK W L+
Sbjct: 647 GLGTSSAKEAREYFNDIERHTVNFIYDGKISDESIELAFAKNKADDRKVWIAESSKLLLS 706
Query: 63 TWMEECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGS 122
T ++ R +K T++EFVN+EL+ +S +D RS+P++ DGLKP
Sbjct: 707 TAVDSNRNQK-----------------TFSEFVNEELVEYSQLDLRRSLPNVVDGLKPSQ 749
Query: 123 RKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQP 182
RKVLFT R +R E++V+QLAG+V+++ YHHGE+SL++TI+ LAQ+FVGSNN+NLL P
Sbjct: 750 RKVLFTMFGRYERGEIRVSQLAGAVSQYCGYHHGEESLVNTIVRLAQDFVGSNNLNLLLP 809
Query: 183 IGQFGTFL 190
+GQFGT L
Sbjct: 810 LGQFGTRL 817
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 87/138 (63%), Gaps = 4/138 (2%)
Query: 218 NDYKEYHTDTTVKFV--VTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKF 275
++Y+E HT++ V F+ V P K ++ L+++ KL++ + +SM FD VL K+
Sbjct: 976 SNYEELHTESNVHFILHVIDKPLLSDKKQIKALNRLLKLRSVASENSMILFDEKNVLQKY 1035
Query: 276 DTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALK-LTNQARFIVEKCDGDLRIENRKKK 334
D+T +I +EF+ VR + Y +R++ E V+ LK + NQ RF+ +G++ I+ + +
Sbjct: 1036 DSTREIFQEFFEVRRQKYIERRE-CELVIMEGKLKFIENQVRFVNAIINGEIIIKKKNRA 1094
Query: 335 EMIAELIKRKYDSDPVKS 352
E+IA+L ++ +DS+P+K+
Sbjct: 1095 EIIAQLAEKGFDSNPMKA 1112
>gi|171683279|ref|XP_001906582.1| hypothetical protein [Podospora anserina S mat+]
gi|170941599|emb|CAP67253.1| unnamed protein product [Podospora anserina S mat+]
Length = 1767
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 114/182 (62%), Gaps = 12/182 (6%)
Query: 9 IAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEEC 68
+ GLG+S++++A+ YF++++RH F+ + + M FSKK D RK WL ++
Sbjct: 720 LKGLGSSSNEDAQVYFTDLDRHLKEFETLKPEESQMLDMIFSKKKADARKEWLGNFVPGT 779
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
T + I+Y++F+ E ILFS DN RSIPS+ DG KPG RKV+++
Sbjct: 780 ------------FLDSTAQRISYSQFLQNEFILFSMADNIRSIPSMIDGFKPGQRKVIYS 827
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + KV +LAG ++E +AYHHGEQSL TII LAQ FVGSNN+N L+P G FG+
Sbjct: 828 AFKRNLVNDQKVVELAGYISEQAAYHHGEQSLQQTIIGLAQTFVGSNNVNCLEPSGNFGS 887
Query: 189 FL 190
L
Sbjct: 888 RL 889
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 77/133 (57%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE++ TV F++ M A +GL + FKL TT++ +++ AFD G + K+D
Sbjct: 1059 DYKEFNDHKTVHFIIDMDEKHREAALREGLLEKFKLTTTVSTTNLVAFDTQGKIRKYDNV 1118
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I++E+Y RL+ Y +RK + V A+ KL NQ RFI E D + + +KK ++
Sbjct: 1119 EEIMEEYYHYRLKMYTERKKHWLKVYHADYRKLKNQYRFITEIIDNKMVVNRKKKAVLVQ 1178
Query: 339 ELIKRKYDSDPVK 351
EL R Y++ P K
Sbjct: 1179 ELRDRDYEAFPPK 1191
>gi|448932811|gb|AGE56369.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus NE-JV-1]
Length = 1057
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 116/182 (63%), Gaps = 17/182 (9%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWME--EC 68
GLGTST+++AK YF N++ +F ++ D+ + I +F+K D+RK WL ++ +
Sbjct: 561 GLGTSTTEDAKRYFKNLKGLMKMFDWTDDSGEL-IDRSFNKSRPDDRKKWLLDFVPGNQI 619
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
++K I +F++KELILFS D ERSIPS+ DG KP RK+LF+
Sbjct: 620 DQKKSR--------------IPVPDFIDKELILFSRYDVERSIPSVVDGFKPSQRKILFS 665
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN E+KVAQ +G VAEHS YHHGE SL II +AQ+FVGSNN+NLL P GQFG+
Sbjct: 666 AFKRNLTTEMKVAQFSGYVAEHSGYHHGEASLQGAIIGMAQDFVGSNNVNLLMPNGQFGS 725
Query: 189 FL 190
L
Sbjct: 726 RL 727
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 81/183 (44%), Gaps = 39/183 (21%)
Query: 190 LFIFEST-NLSGAVVNALDFGSGGWRFESNDYKEY----------------HTDTTVKFV 232
+F+ +S ++ G + G W +NDYKEY HTD V F
Sbjct: 839 VFVCKSVVSIDGKTATVSELPVGSW---TNDYKEYLESLVEKKAIVDFREKHTDDKVLFE 895
Query: 233 VTMS--PDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRL 290
+ PD K+ KL++T+ S+M AFD G + K+ + IL+E++ VR
Sbjct: 896 IDFHDVPDP----------KLLKLESTIRTSNMHAFDPSGRIKKYGSPLDILREWFEVRK 945
Query: 291 EYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAEL-------IKR 343
+Y+KRK YL L + + RFI G+L I + + + +EL I
Sbjct: 946 RFYSKRKKYLIRDLKHRTKITSYKHRFISMINAGELTITKKTENAVASELNTLEFYKIDG 1005
Query: 344 KYD 346
KYD
Sbjct: 1006 KYD 1008
>gi|10281028|dbj|BAB13755.1| type II DNA topoisomerase [Clavispora lusitaniae]
Length = 772
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 113/178 (63%), Gaps = 12/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS + E EYF + RH F D+D +I +AF+KK D+RK WL ++ +
Sbjct: 559 GLGTSLATEITEYFQQLSRHLKRFHALQDDDKQYIDLAFNKKKADDRKDWLGAYIPGTQL 618
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E+ + I +F+NKELILFS DN RS+P + DGLKP RKV++
Sbjct: 619 DPEI------------EEIPIADFINKELILFSMADNIRSLPCVLDGLKPAQRKVIYGLQ 666
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR RE KV LAG ++ ++AYHHG+QSL+ TI+++AQ+FVG+NNINLL+P G FG+
Sbjct: 667 KRAGNREGKVNDLAGYISSNTAYHHGDQSLVMTIVSMAQDFVGANNINLLEPRGNFGS 724
>gi|155371498|ref|YP_001427032.1| hypothetical protein ATCV1_Z551L [Acanthocystis turfacea Chlorella
virus 1]
gi|155124818|gb|ABT16685.1| hypothetical protein ATCV1_Z551L [Acanthocystis turfacea Chlorella
virus 1]
Length = 1058
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 115/180 (63%), Gaps = 13/180 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS + +AK YF+N++ +S DN I +F+K DERKTWL +
Sbjct: 561 GLGTSDANDAKRYFNNLKALVKTLTWS-DNAAESIDKSFNKSRADERKTWLLDF------ 613
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D TK I +F+NK+LILFS D ERSIPS+ DGLKP RK+LF+ L
Sbjct: 614 --EPGNQLDQKLTK----IPVEDFINKDLILFSRYDVERSIPSVVDGLKPSQRKILFSAL 667
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
KRN +E+KVAQ AG +E++ YHHGE SL I+ +AQ++VGSNNINLL P GQFG+ L
Sbjct: 668 KRNLVQEIKVAQFAGYTSENAGYHHGEASLQGAIVGMAQDYVGSNNINLLLPRGQFGSRL 727
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 35/169 (20%)
Query: 197 NLSGAVVNALDFGSGGWRFESNDYKEY----------------HTDTTV----KFVVTMS 236
++ G V + G W +NDYKE+ HT+ V FV T+
Sbjct: 847 DIKGKTVTVSELPVGTW---TNDYKEHLETLIEKKIVADFRERHTELNVHFEIDFVGTLD 903
Query: 237 PDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKR 296
P+ + KL++T+ ++M AFD G + K+D+ +I+ +++ R E+Y KR
Sbjct: 904 PN------------ILKLESTIRTTNMHAFDPSGKIKKYDSPLEIIADWFTTRKEFYVKR 951
Query: 297 KDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKY 345
K+ L L A L N++RFI DG L I R ++++I +L K K+
Sbjct: 952 KEDLLKDLKARVLVAQNKSRFITSVNDGTLVITRRAEEDVIKDLGKLKF 1000
>gi|310831536|ref|YP_003970179.1| putative DNA topoisomerase IIA [Cafeteria roenbergensis virus
BV-PW1]
Length = 1101
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 120/188 (63%), Gaps = 23/188 (12%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGD---------NDDAHIRMAFSKKLVDERKTWL 61
GLGTS SKEAKEYF ++E I + + + +DDA I +AFSK+L D+RK WL
Sbjct: 578 GLGTSDSKEAKEYFQDIEGSLIDYTWDTNKSKTKGKTVSDDA-IELAFSKELADKRKEWL 636
Query: 62 TTWMEECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPG 121
+ K + I + + I +F+NK+LI FSN D +RSIPSL DG KP
Sbjct: 637 INY------DKNLTINSN------DRQIPVPDFINKDLIHFSNDDTQRSIPSLVDGFKPS 684
Query: 122 SRKVLFTC-LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLL 180
RK+ + L+ ++ +VKVAQLAG V++ AYHHGE SLM II +AQNFVGSNN+NLL
Sbjct: 685 QRKIFYGANLRGLEKDQVKVAQLAGFVSDRVAYHHGEASLMGAIIGMAQNFVGSNNVNLL 744
Query: 181 QPIGQFGT 188
+P GQFG+
Sbjct: 745 EPKGQFGS 752
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%)
Query: 248 LHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAE 307
L + K+ + ++++ A+ G + KF ++I+ FY VRLE Y RK YL + +
Sbjct: 934 LDEKLKMNKKINLTNLHAYTEKGHIQKFKNIDEIINNFYYVRLEGYYNRKKYLLEIYKHQ 993
Query: 308 ALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKY 345
+ + +FI E + L I N+KK + +L +KY
Sbjct: 994 MDIMKYKVKFIKEIINKTLIINNKKKLIIEQDLETKKY 1031
>gi|312086869|ref|XP_003145247.1| hypothetical protein LOAG_09672 [Loa loa]
Length = 655
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++KEA+EYF+++ERH + F Y G D I +AF+K D+RK W+
Sbjct: 115 GLGTSSAKEAREYFTDIERHTVNFIYDGKAADESIDLAFAKNKADDRKIWIAE------- 167
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ L + T++EFVNKEL+ +S +D RS+P++ DG KP RKVLFT
Sbjct: 168 -----SSKLLLSSTNCNQKTFSEFVNKELLEYSQLDLRRSLPNIVDGYKPSQRKVLFTMF 222
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
R +R EV+V+QLAG+V+++ YHHGE+SL++TII LAQ+FVGSNN+NLL P+GQFGT L
Sbjct: 223 GRYERDEVRVSQLAGAVSQYCGYHHGEESLVNTIIRLAQDFVGSNNLNLLLPLGQFGTRL 282
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Query: 215 FESNDYKEYHTDTTVKFV--VTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVL 272
F + Y+E H+++ V F+ V P K ++ L+++ KL++ + +SM FD VL
Sbjct: 443 FICSSYEELHSESNVHFILHVIDKPLISDKKQIKTLNRLLKLRSVASENSMILFDEKNVL 502
Query: 273 TKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRK 332
K+++T I +EF+ VR + Y +R++Y + + + NQ RF+ +G++ IE +
Sbjct: 503 RKYNSTVDIFQEFFEVRRQKYVERREYELKAMDKKLKFIGNQVRFVNAVINGEIIIEKKN 562
Query: 333 KKEMIAELIKRKYDSDPVK 351
+ E++ ++I++ +DS+P+K
Sbjct: 563 RVEIVTQIIEKGFDSNPMK 581
>gi|253742615|gb|EES99414.1| DNA topoisomerase II [Giardia intestinalis ATCC 50581]
Length = 1492
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 119/179 (66%), Gaps = 15/179 (8%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLG+S + +AK+YF + +R Y+ ++ + +++AF KKL D+RKTW++
Sbjct: 671 GLGSSNTTDAKQYFQQIANNRKTLIYNPESA-SKLKLAFDKKLADDRKTWIS-------- 721
Query: 71 RKEMGIGED-YLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
G D YL TK I T FV+KEL+L+ N+R+IPSL DGLKPG RKVL+ C
Sbjct: 722 ----GTDPDTYLDLSPTK-IDITAFVDKELVLYDIESNQRAIPSLMDGLKPGQRKVLYAC 776
Query: 130 LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + ++KV+QL+G V++ +AYHHGE SL TI+N+AQ+F GSNNI LL P G FG+
Sbjct: 777 FKRNLKSKLKVSQLSGYVSDKAAYHHGEASLNGTIVNMAQSFTGSNNIALLYPAGIFGS 835
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 243 AEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEG 302
A D + K FKL ++ S+M ++ +L + T +I+ FY RL Y R++
Sbjct: 1096 ARYDNIVKGFKLDGSIRPSNMWLYNERNMLCLYHTPFKIIDAFYTKRLALYGVRRNNQLI 1155
Query: 303 VLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKYDSDPVK 351
+ ++L L +ARFI + L I+N ++ + E++ KY P +
Sbjct: 1156 DMDDKSLMLNEKARFIKLIIEDKLNIKN-VPRDSVTEILWNKYQFHPSR 1203
>gi|156394521|ref|XP_001636874.1| predicted protein [Nematostella vectensis]
gi|156223981|gb|EDO44811.1| predicted protein [Nematostella vectensis]
Length = 394
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 106/140 (75%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEYHT+T V+FV+TM+ +K+ +AE GLHK FKL+ T+ S+M FD G L K+DTT
Sbjct: 148 DYKEYHTETRVRFVITMAENKMREAEQVGLHKKFKLEATINTSNMVLFDAMGCLKKYDTT 207
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ILKEF+ +R+E Y RK Y+EG+L AE+ KL +QARFI+EK +G + IEN+ K+++I
Sbjct: 208 REILKEFFTLRMERYIMRKAYMEGMLTAESGKLNSQARFILEKIEGTIVIENKPKRDLIT 267
Query: 339 ELIKRKYDSDPVKSWKMKQN 358
L++R Y SDPVK+WK Q+
Sbjct: 268 MLVQRGYPSDPVKAWKDSQD 287
>gi|310831315|ref|YP_003969958.1| putative DNA topoisomerase IIA precursor [Cafeteria roenbergensis
virus BV-PW1]
gi|309386499|gb|ADO67359.1| putative DNA topoisomerase IIA precursor [Cafeteria roenbergensis
virus BV-PW1]
Length = 1488
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 120/188 (63%), Gaps = 23/188 (12%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGD---------NDDAHIRMAFSKKLVDERKTWL 61
GLGTS SKEAKEYF ++E I + + + +DDA I +AFSK+L D+RK WL
Sbjct: 965 GLGTSDSKEAKEYFQDIEGSLIDYTWDTNKSKTKGKTVSDDA-IELAFSKELADKRKEWL 1023
Query: 62 TTWMEECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPG 121
+ K + I + + I +F+NK+LI FSN D +RSIPSL DG KP
Sbjct: 1024 INY------DKNLTINSN------DRQIPVPDFINKDLIHFSNDDTQRSIPSLVDGFKPS 1071
Query: 122 SRKVLFTC-LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLL 180
RK+ + L+ ++ +VKVAQLAG V++ AYHHGE SLM II +AQNFVGSNN+NLL
Sbjct: 1072 QRKIFYGANLRGLEKDQVKVAQLAGFVSDRVAYHHGEASLMGAIIGMAQNFVGSNNVNLL 1131
Query: 181 QPIGQFGT 188
+P GQFG+
Sbjct: 1132 EPKGQFGS 1139
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%)
Query: 248 LHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAE 307
L + K+ + ++++ A+ G + KF ++I+ FY VRLE Y RK YL + +
Sbjct: 1321 LDEKLKMNKKINLTNLHAYTEKGHIQKFKNIDEIINNFYYVRLEGYYNRKKYLLEIYKHQ 1380
Query: 308 ALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKY 345
+ + +FI E + L I N+KK + +L +KY
Sbjct: 1381 MDIMKYKVKFIKEIINKTLIINNKKKLIIEQDLETKKY 1418
>gi|159117354|ref|XP_001708897.1| DNA topoisomerase II [Giardia lamblia ATCC 50803]
gi|30692178|gb|AAP33503.1| topoisomerase II [Giardia intestinalis]
gi|157437011|gb|EDO81223.1| DNA topoisomerase II [Giardia lamblia ATCC 50803]
Length = 1491
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 119/179 (66%), Gaps = 15/179 (8%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLG+S + +AK+YF + +R Y+ ++ + +++AF KKL D+RKTW++
Sbjct: 670 GLGSSNTTDAKQYFQQIANNRKTLIYNPESA-SKLKLAFDKKLADDRKTWIS-------- 720
Query: 71 RKEMGIGED-YLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
G D YL TK I T FV+KEL+L+ N+R+IPSL DGLKPG RKVL+ C
Sbjct: 721 ----GTDPDTYLDLSPTK-IDITAFVDKELVLYDIESNQRAIPSLMDGLKPGQRKVLYAC 775
Query: 130 LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + ++KV+QL+G V++ +AYHHGE SL TI+N+AQ+F GSNNI LL P G FG+
Sbjct: 776 FKRNLKTKLKVSQLSGFVSDKAAYHHGEASLNGTIVNMAQSFTGSNNIALLYPAGIFGS 834
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Query: 243 AEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEG 302
A D + K FKL ++ S+M ++ +L + T +I+ FYA RL+ Y R++
Sbjct: 1095 ARYDNIVKGFKLDGSIRPSNMWLYNERNMLCLYHTPFKIIDAFYAKRLDLYRVRRNNQII 1154
Query: 303 VLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKYDSDPVK 351
+ +L L +ARFI + L I+N ++ + EL+ KY P +
Sbjct: 1155 DMDDRSLMLNEKARFIKLIIEDKLNIKN-VPRDSVTELLWGKYQFHPSR 1202
>gi|308159431|gb|EFO61962.1| DNA topoisomerase II [Giardia lamblia P15]
Length = 1492
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 119/179 (66%), Gaps = 15/179 (8%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLG+S + +AK+YF + +R Y+ ++ + +++AF KKL D+RKTW++
Sbjct: 671 GLGSSNTTDAKQYFQQIANNRKTLIYNPESA-SKLKLAFDKKLADDRKTWIS-------- 721
Query: 71 RKEMGIGED-YLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
G D YL TK I T FV+KEL+L+ N+R+IPSL DGLKPG RKVL+ C
Sbjct: 722 ----GTDPDTYLDLSPTK-IDITAFVDKELVLYDIESNQRAIPSLMDGLKPGQRKVLYAC 776
Query: 130 LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + ++KV+QL+G V++ +AYHHGE SL TI+N+AQ+F GSNNI LL P G FG+
Sbjct: 777 FKRNLKTKLKVSQLSGFVSDKAAYHHGEASLNGTIVNMAQSFTGSNNIALLYPAGIFGS 835
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Query: 243 AEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEG 302
A D + K FKL ++ S+M ++ +L + T +I+ FYA RL+ Y R++
Sbjct: 1096 ARYDNIVKGFKLDGSIRPSNMWLYNEKNMLCLYHTPFKIIDAFYAKRLDLYRVRRNNQIT 1155
Query: 303 VLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKYDSDPVK 351
+ +L L +ARFI + L I+N ++ + EL+ KY P +
Sbjct: 1156 DMDDRSLLLNEKARFIKLIIEDKLNIKN-VSRDSVTELLWEKYQFHPSR 1203
>gi|393909866|gb|EJD75625.1| DNA topoisomerase 2 [Loa loa]
Length = 1185
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 123/180 (68%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++KEA+EYF+++ERH + F Y G D I +AF+K D+RK W+
Sbjct: 650 GLGTSSAKEAREYFTDIERHTVNFIYDGKAADESIDLAFAKNKADDRKIWIAE------- 702
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ L + T++EFVNKEL+ +S +D RS+P++ DG KP RKVLFT
Sbjct: 703 -----SSKLLLSSTNCNQKTFSEFVNKELLEYSQLDLRRSLPNIVDGYKPSQRKVLFTMF 757
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
R +R EV+V+QLAG+V+++ YHHGE+SL++TII LAQ+FVGSNN+NLL P+GQFGT L
Sbjct: 758 GRYERDEVRVSQLAGAVSQYCGYHHGEESLVNTIIRLAQDFVGSNNLNLLLPLGQFGTRL 817
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
Query: 220 YKEYHTDTTVKFV--VTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
Y+E H+++ V F+ V P K ++ L+++ KL++ + +SM FD VL K+++
Sbjct: 978 YEELHSESNVHFILHVIDKPLISDKKQIKTLNRLLKLRSVASENSMILFDEKNVLRKYNS 1037
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
T I +EF+ VR + Y +R++Y + + + NQ RF+ +G++ IE + + E++
Sbjct: 1038 TVDIFQEFFEVRRQKYVERREYELKAMDKKLKFIGNQVRFVNAVINGEIIIEKKNRVEIV 1097
Query: 338 AELIKRKYDSDPVK 351
++I++ +DS+P+K
Sbjct: 1098 TQIIEKGFDSNPMK 1111
>gi|322510575|gb|ADX05889.1| putative DNA gyrase/DNA topoisomerase IV subunit A [Organic Lake
phycodnavirus 1]
Length = 1083
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 112/180 (62%), Gaps = 15/180 (8%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTSKE KEYF + + IL G+ D I M F+KK + RK WL+T+
Sbjct: 581 GLGTSTSKEFKEYFKDKKTMDILL---GEQDTEKIDMVFNKKKSEHRKEWLSTY------ 631
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
D + I+ +FV+KE+I FS D +RSIP+L DGLK RK+L++
Sbjct: 632 ------NRDGVLDTNQLQISVCDFVDKEMIHFSKYDCDRSIPNLMDGLKVSQRKILYSAF 685
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
K+N E+KVAQ +G V+EHS YHHGE SL I+N+AQ FVGSNNIN+L P GQFGT L
Sbjct: 686 KKNLVSEIKVAQFSGYVSEHSGYHHGESSLNGAIVNMAQTFVGSNNINVLMPNGQFGTRL 745
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 73/131 (55%), Gaps = 8/131 (6%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMD--GLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
DY + TD+ + F +T+ K MD + K FKL TTL+I++M FD + L ++
Sbjct: 901 DYSDQSTDSVIYFKLTL------KENMDEEAILKTFKLTTTLSINNMNLFDPFDKLVHYN 954
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
++I +F VRL YY KRK YL +L E L+N+ ++I E + L + + +M
Sbjct: 955 EVHEICDDFIQVRLGYYEKRKLYLVKMLSEEMNILSNKCKYINELLNDTLDLRKKSNSQM 1014
Query: 337 IAELIKRKYDS 347
+ L ++KYD+
Sbjct: 1015 VELLQQKKYDT 1025
>gi|45191011|ref|NP_985265.1| AER410Wp [Ashbya gossypii ATCC 10895]
gi|44984079|gb|AAS53089.1| AER410Wp [Ashbya gossypii ATCC 10895]
gi|374108491|gb|AEY97398.1| FAER410Wp [Ashbya gossypii FDAG1]
Length = 1427
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 125/209 (59%), Gaps = 24/209 (11%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ +EA+EYFS ++ H F +D + I +AFSKK D+RK WL R
Sbjct: 611 GLGTSSFQEAREYFSALDVHIKKFHSLNPDDSSLIDLAFSKKKADDRKEWL--------R 662
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E G D T+ I +F+NKELILFS DN RSIP L DGLKP RKV+F
Sbjct: 663 QYEPGTVLDPHLTE----IQIGDFINKELILFSLADNLRSIPHLLDGLKPSQRKVIFGSF 718
Query: 131 KRND-RREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTF 189
KRN + E+KV +LA V+ +AYHH EQSL+ TI++LAQ+FVG+NNI LL P G FGT
Sbjct: 719 KRNIMKTEIKVQELAAYVSGQTAYHHTEQSLVQTIVSLAQDFVGANNIYLLMPRGAFGTR 778
Query: 190 L----------FIFESTN-LSGAVVNALD 207
+IF N +S V N LD
Sbjct: 779 ATGGKDAAAARYIFTQLNSISKHVFNPLD 807
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 77/122 (63%), Gaps = 1/122 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D +E H T+KFVVT++P+++ + G ++ FKL +T+++S+M FD + + K++
Sbjct: 940 DMQEQHG-ATIKFVVTLTPEEMERTRKIGFYERFKLISTVSLSNMVLFDAHNKIKKYNDV 998
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL +F+ VRLE+Y KRKDY+ L + KL+ Q +FI D +LR+ + + ++
Sbjct: 999 KEILTDFFYVRLEFYQKRKDYMIERLQWQLEKLSFQVKFIKMIIDEELRVTKKARSVLMK 1058
Query: 339 EL 340
EL
Sbjct: 1059 EL 1060
>gi|268574422|ref|XP_002642188.1| Hypothetical protein CBG18156 [Caenorhabditis briggsae]
Length = 1206
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 113/178 (63%), Gaps = 27/178 (15%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS EA+EYF N++ H + F Y+G +DD IRMAF ++ DERK W+
Sbjct: 632 GLGTSTSNEAREYFRNLDHHTVNFNYAGSSDDDAIRMAFDREKSDERKRWI--------- 682
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + ++ TE V K + ++ E SIPSL DGLKP RK+L+T L
Sbjct: 683 -------------RGSDEVSTTEDVEK-----TELNYEESIPSLIDGLKPSQRKILWTLL 724
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K ++ E+KV+QLAG+VA +YHHGE+SL+ TI+ + Q F G++N+ LLQPIGQFGT
Sbjct: 725 KMDETTEMKVSQLAGAVAHRQSYHHGEESLVRTIVRMGQTFCGASNMPLLQPIGQFGT 782
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
Query: 219 DYKEYHTDTTVKFVVTMSPDK----LHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTK 274
++ E HT+ V F + K L K+ D L+ FKL+T++ + FDR G L +
Sbjct: 1000 EFSERHTEKQVNFRLIFDRKKAARFLQKSNSDLLN-YFKLRTSIT-ENRVLFDRNGQLKE 1057
Query: 275 FDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKK 334
F ++I EF+ +R + Y KR + + A+ + NQ FI +G +++ ++
Sbjct: 1058 FGNVSEIANEFFEIRKDLYQKRLEIQKRECEAKLKYVNNQMNFIELVTNGTFELKSMDRE 1117
Query: 335 EMIAELIKRKYDSDPVKSWKMKQN 358
+ +L + ++ D +K+ K++
Sbjct: 1118 SLELKLEEIGFEVDSMKTENSKKS 1141
>gi|2909389|emb|CAA76311.1| DNA topoisomerase II alpha [Cricetulus longicaudatus]
Length = 214
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 100/129 (77%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DY+EYHTDTTVKFV+ M+ +KL +AE GLHKVFKLQT+L +SM FD G L K+DT
Sbjct: 86 DYREYHTDTTVKFVIKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTV 145
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
ILK+F+ +RL+YY RK++L G+LGAE+ KL NQARFI+EK DG + IEN+ KKE+I
Sbjct: 146 LDILKDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIK 205
Query: 339 ELIKRKYDS 347
LI+R YDS
Sbjct: 206 VLIQRGYDS 214
>gi|116194666|ref|XP_001223145.1| hypothetical protein CHGG_03931 [Chaetomium globosum CBS 148.51]
gi|88179844|gb|EAQ87312.1| hypothetical protein CHGG_03931 [Chaetomium globosum CBS 148.51]
Length = 1715
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 115/182 (63%), Gaps = 12/182 (6%)
Query: 9 IAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEEC 68
+ GLG+S++++A+ YF +++RH F + +AFSKK D RK WL ++
Sbjct: 710 LKGLGSSSNEDAQIYFKDLDRHLKKFDVLQPEESQLFELAFSKKKADARKEWLGNFVPGT 769
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
YL T +YT+FV+KELILFS DN RSIPS+ DGLKPG RKV++
Sbjct: 770 -----------YL-DATAARKSYTDFVHKELILFSMADNMRSIPSMVDGLKPGQRKVIYG 817
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + KVA+LAG ++E +AYHHGE SL TI+ LAQ +VGSNN+N L+P G FG+
Sbjct: 818 AFKRNLVNDQKVAELAGYISEVAAYHHGEVSLQQTIVGLAQTYVGSNNVNCLEPSGNFGS 877
Query: 189 FL 190
L
Sbjct: 878 RL 879
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 85/146 (58%), Gaps = 2/146 (1%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMD-GLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
DY+E++ TV F++ M DK KA +D GL + FKL ++ +++ AF+ G + K++
Sbjct: 1049 DYREFNDHQTVHFIIDME-DKHMKAALDEGLLEKFKLSKSMTTTNLVAFNTRGQIHKYEN 1107
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
+I++EFY R Y +RK + GV A+ KL NQ RFI+E + L + +KK ++
Sbjct: 1108 PEEIMEEFYHYRFNMYTERKKHWLGVYHADYRKLKNQYRFILEIIENKLIVNKKKKDVLV 1167
Query: 338 AELIKRKYDSDPVKSWKMKQNKENAL 363
EL RKY++ P K K ++ + L
Sbjct: 1168 QELRDRKYEAFPPKDDKKSKSTDEEL 1193
>gi|448933486|gb|AGE57042.1| DNA topoisomerase II [Acanthocystis turfacea Chlorella virus
NE-JV-3]
Length = 1058
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 116/182 (63%), Gaps = 17/182 (9%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDA--HIRMAFSKKLVDERKTWLTTWMEEC 68
GLGTS + +AK YF+N+ ++L K +DDA I +F+K DERKTWL +
Sbjct: 561 GLGTSDANDAKRYFNNL---KVLVKTLTWSDDAAESIDKSFNKSRADERKTWLLDFKPG- 616
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
+ L K TK I +F+NK+LILFS D ERSIPS+ DGLKP RK+LF+
Sbjct: 617 ----------NQLDQKLTK-IPVEDFINKDLILFSRYDVERSIPSVVDGLKPSQRKILFS 665
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+RN E+KVAQ +G V+EH+ YHHGE SL I+ +AQ++VGSNNINLL P G FG+
Sbjct: 666 AFRRNLTSEIKVAQFSGYVSEHAGYHHGEASLQGAIVGMAQDYVGSNNINLLLPRGSFGS 725
Query: 189 FL 190
L
Sbjct: 726 RL 727
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 12/130 (9%)
Query: 219 DYKEYHTDTTVKFVVTM--SPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
D++E H +T V F + PD K+ KL +T+ ++M AFD G + K+D
Sbjct: 882 DFREKHDETNVLFEIDFIGVPDP----------KILKLDSTIRTTNMHAFDPEGKIKKYD 931
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
+ I+ +++A R E+Y KRK+ L L A L N++RFI DG L I R ++++
Sbjct: 932 SPLDIITDWFATRKEFYIKRKEDLLKDLKARVLVAQNKSRFITSVNDGTLIITRRAEEDV 991
Query: 337 IAELIKRKYD 346
I +L K K+D
Sbjct: 992 IKDLNKMKFD 1001
>gi|145480573|ref|XP_001426309.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393383|emb|CAK58911.1| unnamed protein product [Paramecium tetraurelia]
Length = 1196
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 113/181 (62%), Gaps = 16/181 (8%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLT--TWMEEC 68
GLGTST EA++YFSN+ HR +F YS D +I + FSK D+RK WL+ +W +
Sbjct: 276 GLGTSTDSEAQQYFSNLTLHRKVFTYSDQTDSDYIDLVFSKTKADQRKDWLSEYSWKQ-- 333
Query: 69 RRRKEMGIGEDYL-YTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLF 127
ED L Y+K + Y FV L + S DN RSIPS DGLKP RK++
Sbjct: 334 --------VEDTLDYSKPN--VRYRNFVTDCLAMHSISDNLRSIPSSIDGLKPTQRKIIH 383
Query: 128 TCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFG 187
T L + ++E KV+ L+G V ++ YHHGEQSL T++ +AQNF GSNNINLL PIGQFG
Sbjct: 384 TLL-NHSKQEYKVSSLSGLVTTYAQYHHGEQSLQQTVVAMAQNFTGSNNINLLLPIGQFG 442
Query: 188 T 188
T
Sbjct: 443 T 443
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 75/139 (53%), Gaps = 4/139 (2%)
Query: 202 VVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAIS 261
+ + ++ G E D KEYH V F + ++ + L + + K FKLQTT+A++
Sbjct: 588 IQSKMEVAEGKSEPEILDMKEYHAGNKVCFELKVTDEVLKQ----DIEKYFKLQTTIAMT 643
Query: 262 SMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEK 321
++ F+ G+L ++ ++IL EFY R+++Y RK+YL E + ++++FI
Sbjct: 644 NLVLFNEKGLLKRYSNVSEILDEFYQTRIKFYQLRKEYLLSKYQNELELVQSKSKFIEGM 703
Query: 322 CDGDLRIENRKKKEMIAEL 340
D +++ KK EM +L
Sbjct: 704 IDNSIQLRGLKKMEMCKKL 722
>gi|440638703|gb|ELR08622.1| hypothetical protein GMDG_03313 [Geomyces destructans 20631-21]
Length = 1665
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 116/180 (64%), Gaps = 12/180 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF+ ++ H F+ ++ +AFSKK D RK WL ++
Sbjct: 734 GLGTSTTQDAQVYFTKLDEHLKEFEPIKREEEDLFDLAFSKKRADHRKQWLGNFIP---- 789
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G D+ +K I+Y +FVN+ELILFS DN RSIPS+ DGLKPG RKV+++
Sbjct: 790 ----GTFLDHSSSK----ISYDDFVNRELILFSMADNMRSIPSVIDGLKPGQRKVIYSAF 841
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
RN ++KV +LAG + +AY HGEQSL TII LAQ+FVGSNN+N L+P G FG+ L
Sbjct: 842 TRNITSDMKVVELAGYCSGLTAYQHGEQSLQGTIIGLAQDFVGSNNVNCLEPSGNFGSRL 901
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 79/131 (60%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKE++ V FVV M ++ A +GL + FKLQ T+A S++ AFD G + K+
Sbjct: 1068 DYKEFNDHDNVHFVVQMEASQMKAALTEGLEEKFKLQKTIATSNLVAFDLEGRIRKYTKV 1127
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+IL+EFY RL Y KRK + + G E KL+NQARF++E D L + + K +++A
Sbjct: 1128 EEILEEFYIHRLAMYTKRKQHWLDIFGKEYRKLSNQARFVLEIIDNKLVVSKKTKPKLVA 1187
Query: 339 ELIKRKYDSDP 349
EL +KY+ P
Sbjct: 1188 ELRAKKYEPFP 1198
>gi|313768427|ref|YP_004062107.1| hypothetical protein MpV1_224c [Micromonas sp. RCC1109 virus MpV1]
gi|312599123|gb|ADQ91147.1| hypothetical protein MpV1_224c [Micromonas sp. RCC1109 virus MpV1]
Length = 1070
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 115/181 (63%), Gaps = 8/181 (4%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS EA+EYF ++ + F DD+ I +AF KK D RK WL +
Sbjct: 570 GLGTSTSAEAREYFKKIQDLTVKFDADTMTDDS-IILAFDKKKADARKAWLLESTAKEAN 628
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ E+ G+ K + T+FV+K+L+ FS D +RSI + DGLKP RKV+++C
Sbjct: 629 QLEIPYGD-------VKQLNITDFVHKDLVNFSLADLKRSIAHVADGLKPSQRKVMYSCF 681
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
++N + E+KVAQLA VAE SAYHHGE SL TI+ LA ++ GSNNINLL+P GQFGT L
Sbjct: 682 QKNLKDEMKVAQLAAYVAEKSAYHHGEVSLAETIVKLANDYTGSNNINLLEPCGQFGTRL 741
Query: 191 F 191
Sbjct: 742 M 742
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 199 SGAVVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLHKAEMD---------GLH 249
+G+ + + G W + DYKEY K ++T + ++D L
Sbjct: 863 TGSRLKVTELPPGRW---TQDYKEYLDTLVDKKMITSFTNNSTTEDVDFEIFGYSGKDLI 919
Query: 250 KVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEAL 309
K KL+ T ++M F + K+ + +ILK+F +RLE+Y KRK +L VL A
Sbjct: 920 KDLKLRKTFHTTNMHLFHPTKGIYKYTSPEEILKDFVELRLEHYKKRKAHLIDVLEKRAE 979
Query: 310 KLTNQARFIVEKCDGDLRIENRKKKEMIAEL 340
++++F+ +G L + RKK+++ E+
Sbjct: 980 MCGHKSKFVSMVIEGRLVVFKRKKQDLEKEM 1010
>gi|322510995|gb|ADX06308.1| putative DNA gyrase/DNA topoisomerase IV subunit A [Organic Lake
phycodnavirus 2]
Length = 602
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 114/180 (63%), Gaps = 15/180 (8%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST KE KEYF + + I GD D I M F+KK D RK WL+ +
Sbjct: 100 GLGTSTGKEFKEYFKDKKTMDIRL---GDKDIDTIDMVFNKKKSDCRKEWLSNYERN--- 153
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ L T+ TK IT +F+++E+I FS D +RSIP++ DGLK RK+L++
Sbjct: 154 --------NVLDTRDTK-ITLGDFIHREMIHFSKYDCDRSIPNMMDGLKVSQRKILYSAF 204
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
K+N E+KVAQ +G V+EHS YHHGE SL I+N+AQNFVGSNNIN+L P GQFGT L
Sbjct: 205 KKNLVHEIKVAQFSGYVSEHSGYHHGENSLNGAIVNMAQNFVGSNNINILMPNGQFGTRL 264
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+ TD V F +T+ E L K FKL TTL+I++M FD L ++
Sbjct: 418 DYKDQSTDKKVYFKLTLK----QPMEESDLIKTFKLSTTLSINNMNLFDHNDKLKHYNEV 473
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+I +F +RL+YY KR+ +L +L E L N+ +I E + L + + ++
Sbjct: 474 YEICDDFIGIRLDYYEKRRLHLIQILKEEMEVLKNKCNYINELLNDTLDLRKKTNNDICD 533
Query: 339 ELIKRKY 345
L K+KY
Sbjct: 534 ILEKKKY 540
>gi|357542191|gb|AET84951.1| DNA topoisomerase IIB [Micromonas pusilla virus SP1]
Length = 1070
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 115/184 (62%), Gaps = 14/184 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDND---DAHIRMAFSKKLVDERKTWLTTWMEE 67
GLGTSTS EA+EYF ++ + F D D D I +AF KK+ D RKTWL +
Sbjct: 570 GLGTSTSVEAREYFKKIQDLTVKF----DMDVMTDTSIVLAFDKKMADSRKTWLLDSTAK 625
Query: 68 CRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLF 127
E+ G K + T+FV+K+L+ FS D +RSI + DGLKP RKV++
Sbjct: 626 EASELEVPYG-------NVKQLDITDFVHKDLVNFSLADLKRSIAHVADGLKPSQRKVMY 678
Query: 128 TCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFG 187
+C ++N + E+KVAQLA VAE SAYHHGE SL TI+ LA ++ GSNNINLL+P GQFG
Sbjct: 679 SCFQKNLKDEMKVAQLAAYVAEKSAYHHGEVSLADTIVKLANDYTGSNNINLLEPCGQFG 738
Query: 188 TFLF 191
T L
Sbjct: 739 TRLM 742
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 12/151 (7%)
Query: 199 SGAVVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLHKAEMD---------GLH 249
+G+ + + G W + DYKEY K ++ + ++D L
Sbjct: 863 TGSRLKVTELPPGRW---TQDYKEYLDTLVEKKMINSYTNNSTTEDVDFEIFGYTGKDLM 919
Query: 250 KVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEAL 309
K K++ T S+M F + K+ +ILK+F +RLE+Y KRK +L VL A+
Sbjct: 920 KDLKMKKTFHTSNMHLFHPTRGIHKYANAEEILKDFVELRLEHYKKRKAHLVDVLQKRAV 979
Query: 310 KLTNQARFIVEKCDGDLRIENRKKKEMIAEL 340
++A+F+ +GDL + +KKK++ AE+
Sbjct: 980 MCGHRAKFVSMVIEGDLVVFKKKKKDLEAEM 1010
>gi|367033261|ref|XP_003665913.1| DNA topoisomerase 2-like protein [Myceliophthora thermophila ATCC
42464]
gi|347013185|gb|AEO60668.1| DNA topoisomerase 2-like protein [Myceliophthora thermophila ATCC
42464]
Length = 1772
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 114/182 (62%), Gaps = 12/182 (6%)
Query: 9 IAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEEC 68
+ GLG+S++++A+ YF +++RH F + + +AFSKK D RK WL +
Sbjct: 697 LKGLGSSSNEDAQIYFKDLDRHLKKFDILKPEESQLLELAFSKKKADARKEWLGNF---- 752
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
I YL + ++ T +FV KELILFS DN RSIPS+ DGLKPG RKV++
Sbjct: 753 -------IPGTYLDSTMSRK-TIADFVQKELILFSMADNMRSIPSMIDGLKPGQRKVVYA 804
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KRN + KVA+ AG V+E +AYHHGE SL TII LAQ +VGSNN+N L+P G FG+
Sbjct: 805 AFKRNLVSDQKVAEFAGYVSEVAAYHHGEMSLQQTIIGLAQTYVGSNNVNCLEPSGNFGS 864
Query: 189 FL 190
L
Sbjct: 865 RL 866
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMD-GLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
DY+E++ TV F++ M DK KA +D GL + FKL T+ +++ AF+ G + K+++
Sbjct: 1036 DYREFNDHQTVHFIIEME-DKHLKAALDEGLLEKFKLTKTVTTTNLVAFNTRGQIHKYES 1094
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
+I++EFY R Y +RK + GV A+ KL NQ RF+ E + L + +KK ++
Sbjct: 1095 PEEIMEEFYQYRYNMYTERKKHWLGVYHADYRKLKNQYRFVSEIIENKLVVNKKKKDVLV 1154
Query: 338 AELIKRKYDSDPVK 351
EL RKY++ P K
Sbjct: 1155 QELRDRKYEAFPPK 1168
>gi|378706339|gb|AFC35140.1| hypothetical protein OtV6_232c [Ostreococcus tauri virus RT-2011]
Length = 1071
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/184 (47%), Positives = 115/184 (62%), Gaps = 14/184 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDND---DAHIRMAFSKKLVDERKTWLTTWMEE 67
GLGTSTS EA+EYF ++ + F D+D D I +AF KK D+RK+WL +
Sbjct: 572 GLGTSTSAEAREYFKKIQDLTVKF----DHDIMTDKSIVLAFDKKKADDRKSWLLESTAK 627
Query: 68 CRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLF 127
R E+ G K + T+FV+K+L+ FS D +RSI + DGLKP RKV++
Sbjct: 628 DSRELEVPYG-------NVKQLGITDFVHKDLVNFSLADLKRSIAHMADGLKPSQRKVMY 680
Query: 128 TCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFG 187
C +N + E+KVAQLA VA+ SAYHHGE SL TI+ LA ++ GSNNINLL+P GQFG
Sbjct: 681 ACFHKNLKDEMKVAQLAAYVADKSAYHHGEVSLADTIVKLANDYTGSNNINLLEPCGQFG 740
Query: 188 TFLF 191
T L
Sbjct: 741 TRLM 744
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 12/153 (7%)
Query: 199 SGAVVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLHKAEMD---------GLH 249
+G+ + + G W + DYKEY K V+T + ++D L
Sbjct: 864 TGSRLKVTELPPGRW---TQDYKEYLDTLVEKKVITNFTNNSTTEDVDFEIMGYSGKDLI 920
Query: 250 KVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEAL 309
K KL+ T S+M F + K+ + +ILK+F +RL++Y KRK++L VL A
Sbjct: 921 KDLKLRKTFHTSNMHLFHPVKGIHKYSSPEEILKDFVELRLDHYVKRKEHLIKVLQTRAT 980
Query: 310 KLTNQARFIVEKCDGDLRIENRKKKEMIAELIK 342
+++F++ +GD+ + RKK ++ +L++
Sbjct: 981 MCGYKSKFVMMVIEGDIVVFKRKKDDLERQLVQ 1013
>gi|356980038|gb|AET43517.1| DNA topoisomerase IIB [Micromonas pusilla virus PL1]
Length = 1036
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/184 (47%), Positives = 115/184 (62%), Gaps = 14/184 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDND---DAHIRMAFSKKLVDERKTWLTTWMEE 67
GLGTSTS EA++YF ++ + F D D D I +AF KK+ D RKTWL +
Sbjct: 570 GLGTSTSAEARDYFKKIQDLTVKF----DMDVMTDTSIVLAFDKKMADSRKTWLLDSTAK 625
Query: 68 CRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLF 127
E+ G K + T+FV+K+L+ FS D +RSI + DGLKP RKV++
Sbjct: 626 EASELEVPYG-------NVKQLDITDFVHKDLVNFSLADLKRSIAHVADGLKPSQRKVMY 678
Query: 128 TCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFG 187
+C ++N + E+KVAQLA VAE SAYHHGE SL TI+ LA ++ GSNNINLL+P GQFG
Sbjct: 679 SCFQKNLKDEMKVAQLAAYVAEKSAYHHGEVSLADTIVKLANDYTGSNNINLLEPCGQFG 738
Query: 188 TFLF 191
T L
Sbjct: 739 TRLM 742
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 199 SGAVVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLHKAEMD---------GLH 249
+G+ + + G W + DYKEY K ++ + ++D L
Sbjct: 863 TGSRLKVTELPPGRW---TQDYKEYLDTLVEKKMINSYTNNSTTEDVDFEIFGYTGKDLM 919
Query: 250 KVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEAL 309
K K++ T S+M F + K+ +IL++F +RLE+Y KRK +L VL A+
Sbjct: 920 KDLKMKKTFHTSNMHLFHPTRGIHKYANAEEILRDFVELRLEHYKKRKAHLVDVLQKRAV 979
Query: 310 KLTNQARFIVEKCDGDLRIENRKKKEMIAELIKR 343
++A+F+ +GDL + +K++ + +R
Sbjct: 980 MCGHRAKFVSMVIEGDLVVFKKKRRTWRPKCPRR 1013
>gi|317158221|ref|XP_001826919.2| DNA topoisomerase 2 [Aspergillus oryzae RIB40]
Length = 1700
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 113/165 (68%), Gaps = 12/165 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+++A+ YF +++RH F DN+ I +AFSKK DERK WL R
Sbjct: 715 GLGTSTTEDAQVYFRDLDRHLKEFHTMQDNEVGLIELAFSKKKADERKEWL--------R 766
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ + G D+ +K I+YT+F+NKELILFS DN RSIPS+ DGLKPG RKVL+TC
Sbjct: 767 QFKPGTFLDHSVSK----ISYTDFINKELILFSMADNVRSIPSVVDGLKPGQRKVLYTCF 822
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSN 175
+RN ++++KV +LAG V+ +AY HG+ SL TI+ LAQ+F GS+
Sbjct: 823 RRNLKKDMKVVELAGHVSGMTAYQHGDISLQQTIVGLAQSFGGSD 867
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 75/131 (57%), Gaps = 10/131 (7%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y+T T + A +GL + FKL T+A +++ AFD G +TK+ T
Sbjct: 1022 DYKDYNTHTK----------NMKSALSEGLEEKFKLSKTVATTNLVAFDPEGRITKYATV 1071
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ ILKEFY RL++Y KRK Y L E KL+NQARF+ E DG L + +KK ++
Sbjct: 1072 DDILKEFYTYRLKFYEKRKQYQLSQLQKELDKLSNQARFVQEIIDGKLVVSKKKKNVLVQ 1131
Query: 339 ELIKRKYDSDP 349
EL + Y + P
Sbjct: 1132 ELKDKGYKAFP 1142
>gi|260666081|ref|YP_003213035.1| DNA topoisomerase II [Ostreococcus tauri virus 1]
gi|260161099|emb|CAY39800.1| DNA topoisomerase II [Ostreococcus tauri virus 1]
Length = 1072
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/184 (47%), Positives = 115/184 (62%), Gaps = 14/184 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDND---DAHIRMAFSKKLVDERKTWLTTWMEE 67
GLGTSTS EA+EYF ++ + F D D D I +AF KK D+RKTWL +
Sbjct: 573 GLGTSTSAEAREYFKKIQDLTVKF----DMDIMTDKSIVLAFDKKKADDRKTWLLESTAK 628
Query: 68 CRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLF 127
+ E+ G + K ++ T FV K+L+ FS D +RSI + DGLKP RKV++
Sbjct: 629 DPKELEVPYG-------SVKNLSITHFVRKDLVNFSLADLKRSIAHMADGLKPSQRKVMY 681
Query: 128 TCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFG 187
C +N + E+KVAQLA VA+ SAYHHGE SL TI+ LA +++GSNNINLL+P GQFG
Sbjct: 682 ACFHKNLKDEMKVAQLAAYVADKSAYHHGEVSLADTIVKLANDYMGSNNINLLEPCGQFG 741
Query: 188 TFLF 191
T L
Sbjct: 742 TRLM 745
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 12/151 (7%)
Query: 199 SGAVVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLHKAEMD---------GLH 249
+G+ + + G W + DYKEY K V++ + ++D +
Sbjct: 865 TGSRLKVTELPPGRW---TQDYKEYLDTLMEKKVISGFTNNSTTEDVDFEIMGYTGKDVL 921
Query: 250 KVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEAL 309
K K++ + S+M F + K+ + +ILK+F +RL++Y KRK++L VL +A
Sbjct: 922 KDLKMRKSFHTSNMHLFHPTKGIYKYSSPEEILKDFVDLRLDHYKKRKEHLIKVLQTKAT 981
Query: 310 KLTNQARFIVEKCDGDLRIENRKKKEMIAEL 340
+++F+ +GD+ + RKK ++ +L
Sbjct: 982 MAGYKSKFVTMVIEGDIVVFKRKKDDLERQL 1012
>gi|163955216|ref|YP_001648320.1| hypothetical protein OsV5_244r [Ostreococcus virus OsV5]
gi|163638665|gb|ABY28024.1| hypothetical protein OsV5_244r [Ostreococcus virus OsV5]
Length = 1072
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/184 (47%), Positives = 115/184 (62%), Gaps = 14/184 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDND---DAHIRMAFSKKLVDERKTWLTTWMEE 67
GLGTSTS EA+EYF ++ + F D D D I +AF KK D+RKTWL +
Sbjct: 573 GLGTSTSAEAREYFKKIQDLTVKF----DMDIMTDKSIVLAFDKKKADDRKTWLLESTAK 628
Query: 68 CRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLF 127
+ E+ G + K ++ T FV K+L+ FS D +RSI + DGLKP RKV++
Sbjct: 629 DPKELEVPYG-------SVKNLSITHFVRKDLVNFSLADLKRSIAHMADGLKPSQRKVMY 681
Query: 128 TCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFG 187
C +N + E+KVAQLA VA+ SAYHHGE SL TI+ LA +++GSNNINLL+P GQFG
Sbjct: 682 ACFHKNLKDEMKVAQLAAYVADKSAYHHGEVSLADTIVKLANDYMGSNNINLLEPCGQFG 741
Query: 188 TFLF 191
T L
Sbjct: 742 TRLM 745
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 12/151 (7%)
Query: 199 SGAVVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLHKAEMD---------GLH 249
+G+ + + G W + DYKEY K V++ + ++D +
Sbjct: 865 TGSRLKVTELPPGRW---TQDYKEYLDTLVEKKVISGFTNNSTTEDVDFEIMGYTGKDVL 921
Query: 250 KVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEAL 309
K K++ + S+M F + K+ + +ILK+F +RL++Y KRK++L VL +A
Sbjct: 922 KDLKMRKSFHTSNMHLFHPTKGIYKYSSPEEILKDFVDLRLDHYKKRKEHLIKVLQTKAT 981
Query: 310 KLTNQARFIVEKCDGDLRIENRKKKEMIAEL 340
+++F+ +GD+ + RKK ++ +L
Sbjct: 982 MAGYKSKFVTMVIEGDIVVFKRKKDDLERQL 1012
>gi|630594|pir||S44861 DNA topoisomerase II - Caenorhabditis elegans
Length = 2434
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 113/181 (62%), Gaps = 18/181 (9%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS EA+EYFS+++ H + FKY+G DD IRMAF + DERK W+ R
Sbjct: 1885 GLGTSTSNEAREYFSDLDHHTVNFKYTGTTDDDAIRMAFDRDKSDERKEWI--------R 1936
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNER--SIPSLCDGLKPGSRKVLFT 128
R E I + K + E + + +++R SIPSL DGLKP RK+L+T
Sbjct: 1937 RSENEITNEDDEQKKARMSDGVEDLQR-------FESQRIQSIPSLIDGLKPSQRKILWT 1989
Query: 129 CLKRNDRR-EVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFG 187
L D E+KV+QLAG+VA +YHHGE+SL+ TII + Q F GS+N+ LLQPIGQFG
Sbjct: 1990 LLNNMDESTEIKVSQLAGAVAHRQSYHHGEESLVRTIIRMGQTFCGSSNLPLLQPIGQFG 2049
Query: 188 T 188
T
Sbjct: 2050 T 2050
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 30/210 (14%)
Query: 171 FVGSNNINLLQPIGQFGTFLFIFESTNLSGAVVNALDFGSGGWR-------------FES 217
F+ S I L++P E N S + ++ G W
Sbjct: 2165 FISSGKIQLIRP-----------ERKNASTFSIEIVELPIGIWTSKYKEKLSKIVETLPV 2213
Query: 218 NDYKEYHTDTTVKFVVTMSPDK----LHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLT 273
++ E HT+ V F +T+ K L K+ D L+ FKL+T+L + FDR G L
Sbjct: 2214 LEFSERHTEKRVHFRITLDRKKSSRFLQKSNSDLLN-YFKLRTSLT-ENRVLFDRNGELK 2271
Query: 274 KFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKK 333
+F ++I EF+ VR + Y KR + A+ + + NQ FI +G + I + +
Sbjct: 2272 EFGNISEIAAEFFEVRRDLYEKRLKIQKEECEAKLIYVENQLNFIEMVTNGTIEIRSMGR 2331
Query: 334 KEMIAELIKRKYDSDPVKSWKMKQNKENAL 363
++ +L + + DP+ + K N +
Sbjct: 2332 NQLEEKLQEMGFRVDPMATIAKNSKKVNLI 2361
>gi|388548828|gb|AFK66029.1| topoisomerase 2 [Ostreococcus lucimarinus virus OlV3]
Length = 1072
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 114/184 (61%), Gaps = 14/184 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDND---DAHIRMAFSKKLVDERKTWLTTWMEE 67
GLGTSTS EA+EYF ++ + F D D D I +AF KK D+RK+WL +
Sbjct: 573 GLGTSTSAEAREYFKKIQDLTVKF----DMDIMTDKSIVLAFDKKKADDRKSWLLESTAK 628
Query: 68 CRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLF 127
+ E+ G + K ++ T FV K+L+ FS D +RSI + DGLKP RKV++
Sbjct: 629 DPKELEVPYG-------SVKNLSITHFVRKDLVNFSLADLKRSIAHMADGLKPSQRKVMY 681
Query: 128 TCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFG 187
C +N + E+KVAQLA VA+ SAYHHGE SL TI+ LA ++ GSNNINLL+P GQFG
Sbjct: 682 ACFHKNLKDEMKVAQLAAYVADKSAYHHGEVSLADTIVKLANDYTGSNNINLLEPCGQFG 741
Query: 188 TFLF 191
T L
Sbjct: 742 TRLM 745
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 199 SGAVVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLHKAEMD---------GLH 249
+G+ + + G W + DYKEY K V++ + ++D +
Sbjct: 865 TGSRLKVTELPPGRW---TQDYKEYLDALVEKKVISGFTNNSTTEDVDFEIMGYTGKDIL 921
Query: 250 KVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEAL 309
K KL+ + S+M F + K+ + +ILK+F +RLE+Y +R+++L VL +
Sbjct: 922 KDLKLRKSFHTSNMHLFHPVKGIYKYSSPEEILKDFVDLRLEHYKRRREHLIKVLEVRSK 981
Query: 310 KLTNQARFIVEKCDGDLRIENRKKKEMIAEL 340
+++F+ +G + + RKK ++ +L
Sbjct: 982 MCGYKSKFVTMVIEGQIVVFKRKKDDLERQL 1012
>gi|314055306|ref|YP_004063644.1| DNA topoisomerase II [Ostreococcus tauri virus 2]
gi|313575197|emb|CBI70210.1| DNA topoisomerase II [Ostreococcus tauri virus 2]
gi|388548581|gb|AFK65783.1| topoisomerase II [Ostreococcus lucimarinus virus OlV6]
Length = 1072
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 114/184 (61%), Gaps = 14/184 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDND---DAHIRMAFSKKLVDERKTWLTTWMEE 67
GLGTSTS EA+EYF ++ + F D D D I +AF KK D+RK+WL +
Sbjct: 573 GLGTSTSAEAREYFKKIQDLTVKF----DMDIMTDKSIILAFDKKKADDRKSWLLESTAK 628
Query: 68 CRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLF 127
+ E+ G + K ++ T FV K+L+ FS D +RSI + DGLKP RKV++
Sbjct: 629 DPKELEVPYG-------SVKNLSITHFVRKDLVNFSLADLKRSIAHMADGLKPSQRKVMY 681
Query: 128 TCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFG 187
C +N + E+KVAQLA VA+ SAYHHGE SL TI+ LA ++ GSNNINLL+P GQFG
Sbjct: 682 ACFHKNLKDEMKVAQLAAYVADKSAYHHGEVSLADTIVKLANDYTGSNNINLLEPCGQFG 741
Query: 188 TFLF 191
T L
Sbjct: 742 TRLM 745
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 199 SGAVVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLHKAEMD---------GLH 249
+G+ + + G W + DYKEY K V++ + ++D +
Sbjct: 865 TGSRLKVTELPPGRW---TQDYKEYLDILIEKKVISGFTNNSTTEDVDFEIMGYTGKDIL 921
Query: 250 KVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEAL 309
K KL+ + S+M F + K+ + +ILK+F +RLE+Y +R+++L VL +
Sbjct: 922 KDLKLRKSFHTSNMHLFHPVKGIYKYSSPEEILKDFVDLRLEHYKRRREHLIKVLEVRSK 981
Query: 310 KLTNQARFIVEKCDGDLRIENRKKKEMIAEL 340
+++F+ +G + + RKK ++ +L
Sbjct: 982 MCGYKSKFVTMVIEGQIVVFKRKKDDLERQL 1012
>gi|313844192|ref|YP_004061855.1| hypothetical protein OlV1_223c [Ostreococcus lucimarinus virus
OlV1]
gi|312599577|gb|ADQ91599.1| hypothetical protein OlV1_223c [Ostreococcus lucimarinus virus
OlV1]
Length = 1074
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 115/184 (62%), Gaps = 14/184 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDND---DAHIRMAFSKKLVDERKTWLTTWMEE 67
GLGTSTS EA+EYF ++ + F D D D I +AF KK D+RK+WL +
Sbjct: 573 GLGTSTSAEAREYFKKIQDLTVKF----DMDIMSDRSIVLAFDKKKADDRKSWLLESTAK 628
Query: 68 CRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLF 127
+ E+ G + ++ + FV+K+L+ FS D +RSI + DGLKP RKV++
Sbjct: 629 DPKELEVPYG-------NVRNLSISNFVHKDLVNFSLADLKRSIAHMADGLKPSQRKVMY 681
Query: 128 TCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFG 187
C +N + E+KVAQLA VAE SAYHHGE SL TI+ LA +++GSNNINLL+P GQFG
Sbjct: 682 ACFHKNLKDEMKVAQLAAFVAEKSAYHHGEVSLADTIVKLANDYMGSNNINLLEPCGQFG 741
Query: 188 TFLF 191
T L
Sbjct: 742 TRLM 745
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 12/151 (7%)
Query: 199 SGAVVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLHKAEMD---------GLH 249
+G+ + + G W + DYKEY K V+T + ++D L
Sbjct: 867 TGSRLKITELPPGRW---TQDYKEYLDTLVEKKVITNFTNNSTTDDVDFEIVGYSGKDLV 923
Query: 250 KVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEAL 309
K KL+ + S+M F + K+++ +ILK+F +RL++Y KR+++L VL +A
Sbjct: 924 KDLKLRKSFHTSNMHLFHPTKGIYKYNSPEEILKDFVDLRLDHYKKRREHLIKVLQTKAT 983
Query: 310 KLTNQARFIVEKCDGDLRIENRKKKEMIAEL 340
+++F+ +GD+ + RK+ ++ +L
Sbjct: 984 MCGYKSKFVTMVIEGDIVVFKRKRDDLERQL 1014
>gi|357541785|gb|AET84547.1| DNA gyrase subunit B [Ostreococcus lucimarinus virus OlV4]
Length = 1074
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 115/184 (62%), Gaps = 14/184 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDND---DAHIRMAFSKKLVDERKTWLTTWMEE 67
GLGTSTS EA+EYF ++ + F D D D I +AF KK D+RK+WL +
Sbjct: 573 GLGTSTSAEAREYFKKIQDLTVKF----DMDIMSDRSIVLAFDKKKADDRKSWLLESTAK 628
Query: 68 CRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLF 127
+ E+ G + ++ + FV+K+L+ FS D +RSI + DGLKP RKV++
Sbjct: 629 DPKELEVPYG-------NVRNLSISNFVHKDLVNFSLADLKRSIAHMADGLKPSQRKVMY 681
Query: 128 TCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFG 187
C +N + E+KVAQLA VAE SAYHHGE SL TI+ LA +++GSNNINLL+P GQFG
Sbjct: 682 ACFHKNLKDEMKVAQLAAFVAEKSAYHHGEVSLADTIVKLANDYMGSNNINLLEPCGQFG 741
Query: 188 TFLF 191
T L
Sbjct: 742 TRLM 745
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 12/151 (7%)
Query: 199 SGAVVNALDFGSGGWRFESNDYKEYHTDTTVKFVVTMSPDKLHKAEMD---------GLH 249
+G+ + + G W + DYKEY K V+T + ++D L
Sbjct: 867 TGSRLKITELPPGRW---TQDYKEYLDTLMEKKVITNFTNNSTTDDVDFEIVGYSGKDLV 923
Query: 250 KVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEAL 309
K KL+ + S+M F + K+++ +ILK+F +RL++Y KR+++L VL +A
Sbjct: 924 KDLKLRKSFHTSNMHLFHPTKGIYKYNSPEEILKDFVDLRLDHYKKRREHLIKVLQTKAT 983
Query: 310 KLTNQARFIVEKCDGDLRIENRKKKEMIAEL 340
+++F+ +GD+ + RK+ ++ +L
Sbjct: 984 MCGYKSKFVTMVIEGDIVVFKRKRDDLERQL 1014
>gi|238592069|ref|XP_002392796.1| hypothetical protein MPER_07581 [Moniliophthora perniciosa FA553]
gi|215459345|gb|EEB93726.1| hypothetical protein MPER_07581 [Moniliophthora perniciosa FA553]
Length = 321
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 70/100 (70%), Positives = 83/100 (83%)
Query: 89 ITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVA 148
I Y+EF+NKELILFS DN RSIPS+ DGLKPG RKV++ C KRN ++E+KV QL G V+
Sbjct: 35 IPYSEFINKELILFSMADNVRSIPSVADGLKPGQRKVIWGCFKRNFKKEIKVMQLVGYVS 94
Query: 149 EHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
E + YHHGEQSLM TI+NLAQ+FVGSNNINLL P GQ+GT
Sbjct: 95 EKAVYHHGEQSLMMTIVNLAQDFVGSNNINLLMPNGQYGT 134
>gi|312599337|gb|ADQ91360.1| hypothetical protein BpV2_193c [Bathycoccus sp. RCC1105 virus BpV2]
Length = 1073
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS EA+EYF ++ + F + D+ D I +AF K D RKTWL E+
Sbjct: 571 GLGTSTSVEAREYFKKIKDLTVQFD-TDDSMDESIILAFDKTKSDLRKTWLLESTEKKAS 629
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E+ G + + ++F++K+L+ FS D +RSI + DGLKP RKVL+ C
Sbjct: 630 ELEVPYG-------NVERLGISDFIHKDLVNFSLADLKRSIAHVSDGLKPSQRKVLYACF 682
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+N E+KVAQLA V+E ++YHHGE SL TI+ LA NF GSNNINLL+P GQFGT L
Sbjct: 683 TKNLTSEMKVAQLAAYVSEKTSYHHGEVSLADTIVKLAHNFTGSNNINLLEPCGQFGTRL 742
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 16/155 (10%)
Query: 199 SGAVVNALDFGSGGWRFESNDYKEYHTDTTVK------FVVTMSPDKLHKAEMDG----- 247
SG V + G W + DYKEY DT ++ +V + D ++ + ++G
Sbjct: 864 SGKSVIVTELPPGRW---TQDYKEY-LDTLIEKKKITNYVNNSTTDDVNFS-IEGYTGND 918
Query: 248 LHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAE 307
+ K FKLQ T +S+M F + K+++ +IL +F +R E Y KRK +L VL +
Sbjct: 919 IIKDFKLQKTFHVSNMHLFHPTKGIHKYESPEEILTDFVKIRSETYKKRKTHLICVLKEK 978
Query: 308 ALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIK 342
KL N ++FI L + RK+ E+ E+ K
Sbjct: 979 TKKLENMSKFIDMVIHEKLIVFRRKRVELEREMEK 1013
>gi|313768187|ref|YP_004061618.1| hypothetical protein BpV1_188c [Bathycoccus sp. RCC1105 virus BpV1]
gi|312599794|gb|ADQ91815.1| hypothetical protein BpV1_188c [Bathycoccus sp. RCC1105 virus BpV1]
Length = 1073
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 111/180 (61%), Gaps = 8/180 (4%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS EA+EYF ++ + F D++ I +AF K D RKTWL E+
Sbjct: 571 GLGTSTSAEAREYFKKIKDLTVQFDTDNSMDES-IVLAFDKTKSDLRKTWLLESTEKKAS 629
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E+ G + + ++F++K+L+ FS D +RSI + DGLKP RKVL+ C
Sbjct: 630 ELEVPYG-------NVERLGISDFIHKDLVNFSLADLKRSIAHVSDGLKPSQRKVLYACF 682
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+N E+KVAQLA V+E ++YHHGE SL TI+ LA NF GSNNINLL+P GQFGT L
Sbjct: 683 TKNLTSEMKVAQLAAYVSEKTSYHHGEVSLADTIVKLAHNFTGSNNINLLEPCGQFGTRL 742
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 14/148 (9%)
Query: 199 SGAVVNALDFGSGGWRFESNDYKEYHTDTTVK------FVVTMSPDKLH----KAEMDGL 248
SG V + G W + DYKEY DT ++ +V + D ++ + +
Sbjct: 864 SGKNVLVTELPPGRW---TQDYKEY-LDTLIEKKKITNYVNNSTTDDVNFIIEGYTGNDI 919
Query: 249 HKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEA 308
K FKLQ T +S+M F + K+++ +IL +F +R E Y KRK +L VL +
Sbjct: 920 IKDFKLQKTFHVSNMHLFHPTRGIHKYESPEEILTDFVKIRSETYKKRKAHLIRVLKEKT 979
Query: 309 LKLTNQARFIVEKCDGDLRIENRKKKEM 336
KL N ++FI L + RK+ E+
Sbjct: 980 KKLENMSKFIDMVIHEKLIVFRRKRVEL 1007
>gi|6094496|sp|O24308.1|TOP2_PEA RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
II; AltName: Full=PsTopII
gi|2330651|emb|CAA74891.1| topoisomerase II [Pisum sativum]
Length = 1462
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 105/178 (58%), Gaps = 31/178 (17%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST +E +EYFS++ RHR F + + D I +AFSKK + RK W+ R
Sbjct: 602 GLGTSTPQEGREYFSDLGRHRKDFIWDDELDGNAIELAFSKKKAEGRKIWM--------R 653
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E G D+ K I Y +FVNKELILFS D LF
Sbjct: 654 NFEPGTCRDH----EAKLINYKDFVNKELILFSRAD-------------------LFGSF 690
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+ +E+KVAQ G V+EHSAYHHGEQSL STII +AQ+FVGSNNINLL+P GQFGT
Sbjct: 691 KKKLYKEIKVAQFIGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLKPNGQFGT 748
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 80/133 (60%), Gaps = 1/133 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D+++ D V + M P+K+ +GL K FKL +T++ S+M FD G KFDT
Sbjct: 913 DFRQNGDDAIVDIEIKMKPEKIATILQEGLFKKFKLTSTISTSNMHLFDAEGN-KKFDTP 971
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
QIL+EF+ +RL+YY K K+Y+ G L L L N+ RFI+ +G++ + NRKK E++
Sbjct: 972 EQILEEFFPLRLDYYEKSKEYILGNLNRLLLILDNKVRFILGVVNGEIIVSNRKKAELLI 1031
Query: 339 ELIKRKYDSDPVK 351
EL ++ + P K
Sbjct: 1032 ELKEKGFTPMPRK 1044
>gi|149040009|gb|EDL94093.1| similar to topoisomerase (DNA) II beta [Rattus norvegicus]
Length = 733
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/109 (65%), Positives = 88/109 (80%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+KEAKEYF++MERHRILF+Y+G DDA I +AFSKK +D+RK WLT +ME+ R+
Sbjct: 624 GLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQ 683
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLK 119
R+ G+ E +LY TK +TY +F+NKELILFSN DNERSIPSL D K
Sbjct: 684 RRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDASK 732
>gi|27447212|gb|AAL99217.1| kinetoplast and nucleus-associated type II DNA topoisomerase [Bodo
saltans]
Length = 1247
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 111/179 (62%), Gaps = 12/179 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+ E KEYF ME+H + + + +D + F V RK WL+
Sbjct: 606 GLGTSTTTEGKEYFKQMEQHLMPLQVT-PSDSQVLDNVFDSDEVQWRKEWLSA------- 657
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
E+ + K +T FV+KELI F+N N R++PS DGLKP RK+L++C
Sbjct: 658 ---APAVEEATLDRRQKMLTIPTFVDKELIHFANAGNLRALPSAVDGLKPSQRKILWSCF 714
Query: 131 KRNDRRE-VKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+R + E +KV+QL+G ++E SA+HHGE SL TII +AQ++VGSNNINLL+P GQFG+
Sbjct: 715 RRGNANESLKVSQLSGYISEVSAFHHGEMSLQQTIIKMAQDYVGSNNINLLEPEGQFGS 773
>gi|297850918|ref|XP_002893340.1| hypothetical protein ARALYDRAFT_313269 [Arabidopsis lyrata subsp.
lyrata]
gi|297339182|gb|EFH69599.1| hypothetical protein ARALYDRAFT_313269 [Arabidopsis lyrata subsp.
lyrata]
Length = 951
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 107/181 (59%), Gaps = 28/181 (15%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ +EA+ YF N+ H+ F + ++D I +AF+ ++R+TWL +
Sbjct: 568 GLGTSSDEEAQTYFENISIHKRDFLWQNEDDGKAIDLAFNSDKPEDRRTWLKNYT----- 622
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
F+NKELILFS DN RSIP + DGLKPG RK LF L
Sbjct: 623 -----------------------FINKELILFSKEDNRRSIPEMIDGLKPGQRKTLFCSL 659
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
R+ + E KV+ L + S Y+HGEQSL STII +AQ++VGS+N+NLL P+GQFG+ +
Sbjct: 660 ARDWKTECKVSVLTAHAIDRSDYNHGEQSLASTIIKMAQDYVGSSNVNLLLPMGQFGSQI 719
Query: 191 F 191
F
Sbjct: 720 F 720
>gi|448935611|gb|AGE59161.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus
OR0704.2.2]
Length = 1059
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 118/182 (64%), Gaps = 14/182 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS++AK+YF N++ +F ++ D+ + I +F+K DERKTWL +
Sbjct: 561 GLGTSTSEDAKKYFKNLKSLVKIFGWTEDSGEL-IDRSFNKSRPDERKTWLLNFQP---- 615
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G +KT I +F++KELILFS D ERSIPS+ DGLKP RK+LF
Sbjct: 616 ------GNQLDQSKTN--IPVPDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFAAF 667
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGS-NNINLLQPIGQFGTF 189
KRN E+KVAQ +G VAEHS YHHGEQSL I+ +AQ++VGS NN+NLL P GQFG+
Sbjct: 668 KRNLTNEMKVAQFSGYVAEHSGYHHGEQSLQGAIVGMAQDYVGSNNNMNLLLPNGQFGSR 727
Query: 190 LF 191
L
Sbjct: 728 LL 729
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 219 DYKEYHTDTTVKFVVTMS--PDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
D++E HT+ V F + S PD + KL+ + ++M AFD G + K+
Sbjct: 883 DFREKHTEKNVLFEIDYSGEPD----------LSILKLEKVIRTTNMHAFDPQGKIKKYA 932
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
I+ +++ VR E+Y KRK YL L +A N+ RFI + +L + + + +
Sbjct: 933 DPLDIILDWFEVRREFYTKRKAYLIKDLSHKAAIAENKHRFITLIVNDELVLSKKTESVI 992
Query: 337 IAELIKRKY 345
++EL K+
Sbjct: 993 LSELRTLKF 1001
>gi|448929348|gb|AGE52916.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus CZ-2]
Length = 1059
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 117/179 (65%), Gaps = 14/179 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS++AK+YF N++ +F ++ D+ + I +F+K DERKTWL +
Sbjct: 561 GLGTSTSEDAKKYFKNLKSLVKIFGWTEDSGEL-IDRSFNKSRPDERKTWLLNFQP---- 615
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G +KT I +F++KELILFS D ERSIPS+ DGLKP RK+LF
Sbjct: 616 ------GNQLDQSKTN--IPVPDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFAAF 667
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGS-NNINLLQPIGQFGT 188
KRN E+KVAQ +G VAEHS YHHGEQSL I+ +AQ++VGS NN+NLL P GQFG+
Sbjct: 668 KRNLTNEMKVAQFSGYVAEHSGYHHGEQSLQGAIVGMAQDYVGSNNNMNLLLPNGQFGS 726
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 12/129 (9%)
Query: 219 DYKEYHTDTTVKFVVTMS--PDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
D++E HT+ V F + S PD + KL+ + ++M AFD G + K+
Sbjct: 883 DFREKHTEKNVLFEIDYSGEPD----------LSILKLEKVIRTTNMHAFDPQGKIKKYA 932
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
I+++++ VR E+Y KRK+YL L +A N+ RFI + +L + + + +
Sbjct: 933 DPLDIIRDWFEVRREFYTKRKNYLLKDLSHKAAIAENKHRFITLIVNDELVLSKKTESVI 992
Query: 337 IAELIKRKY 345
++EL K+
Sbjct: 993 LSELRTLKF 1001
>gi|299741517|ref|XP_001834519.2| DNA topoisomerase II [Coprinopsis cinerea okayama7#130]
gi|298404747|gb|EAU87295.2| DNA topoisomerase II [Coprinopsis cinerea okayama7#130]
Length = 966
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 110/174 (63%), Gaps = 18/174 (10%)
Query: 13 GTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRRRK 72
G S K A+EYFS ME+ L + +I +AFSKK DERK WL R+
Sbjct: 641 GFSEDKGAREYFSKMEKRFHLHRRKKGT--VNIDLAFSKKKADERKEWL--------RQY 690
Query: 73 EMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKR 132
+ G D+ + I Y+EF+NKELILFS +N RSIPS+ GLKPG RKV++ C KR
Sbjct: 691 KPGTFLDH----RLEEIPYSEFINKELILFSMANNVRSIPSIAYGLKPGQRKVIWGCFKR 746
Query: 133 NDRREVKVAQLA----GSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQP 182
++E+KV A G ++EH+AYHHGE SL +TIINLAQ+FVGSNN+ LL P
Sbjct: 747 KLKKEIKVEIFARSSNGYISEHAAYHHGEASLAATIINLAQDFVGSNNLALLSP 800
>gi|448927663|gb|AGE51236.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus CVG-1]
Length = 1092
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 117/179 (65%), Gaps = 14/179 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS++AK+YF N++ +F ++ D+ + I +F+K DERKTWL +
Sbjct: 594 GLGTSTSEDAKKYFKNLKSLVKIFGWTEDSGEL-IDRSFNKSRPDERKTWLLDFQP---- 648
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G +KT I +F++KELILFS D ERSIPS+ DGLKP RK+LF
Sbjct: 649 ------GNQLDQSKTN--IPVPDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFAAF 700
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGS-NNINLLQPIGQFGT 188
KRN E+KVAQ +G VAEHS YHHGEQSL I+ +AQ++VGS NN+NLL P GQFG+
Sbjct: 701 KRNLTNEMKVAQFSGYVAEHSGYHHGEQSLQGAIVGMAQDYVGSNNNMNLLLPNGQFGS 759
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 65/129 (50%), Gaps = 12/129 (9%)
Query: 219 DYKEYHTDTTVKFVVTMS--PDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
D++E HT+ V F + PD + KL+ + ++M AFD G + K+
Sbjct: 916 DFREKHTEKNVLFEIDFPGEPD----------LSILKLEKAIRTTNMHAFDPQGKIKKYA 965
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
I+++++ VR E+Y KRK+YL L +A N+ RFI + +L + + + +
Sbjct: 966 DPLDIIRDWFEVRREFYTKRKNYLLKDLSHKAAIAENKHRFITLIVNDELVLSKKTESVI 1025
Query: 337 IAELIKRKY 345
++EL K+
Sbjct: 1026 LSELRTLKF 1034
>gi|340378393|ref|XP_003387712.1| PREDICTED: DNA topoisomerase 2-beta-like [Amphimedon queenslandica]
Length = 996
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/137 (54%), Positives = 97/137 (70%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+DYKEYHTD TV+FVVT+SP+K+ +A+ G+HK FKL + ++ +M FD G L K+
Sbjct: 468 SDYKEYHTDVTVRFVVTLSPEKMEEAQSAGIHKKFKLVSNISTGNMILFDSNGCLKKYYG 527
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
+ILKEFY VRL Y KRK+YL G L AE+L+L NQARFI E + L IE + K +I
Sbjct: 528 EIEILKEFYDVRLALYHKRKEYLVGKLTAESLRLQNQARFITEIIERKLIIERKSKNTVI 587
Query: 338 AELIKRKYDSDPVKSWK 354
+EL + YDSDPVK+WK
Sbjct: 588 SELESKGYDSDPVKAWK 604
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/74 (87%), Positives = 71/74 (95%)
Query: 117 GLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNN 176
GLKPG RKVLFTC KRND+R++KVAQLAGSVAEHSAYHHGEQSLM+TIINLAQ+FVGSNN
Sbjct: 234 GLKPGQRKVLFTCFKRNDKRDIKVAQLAGSVAEHSAYHHGEQSLMATIINLAQDFVGSNN 293
Query: 177 INLLQPIGQFGTFL 190
IN+LQPIGQFGT L
Sbjct: 294 INILQPIGQFGTRL 307
>gi|357463091|ref|XP_003601827.1| DNA topoisomerase [Medicago truncatula]
gi|355490875|gb|AES72078.1| DNA topoisomerase [Medicago truncatula]
Length = 1345
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 100/178 (56%), Gaps = 41/178 (23%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS+E +EYF ++++H F W C
Sbjct: 580 GLGTSTSQEGREYFQDLDKHMKEF----------------------------IWPSTC-- 609
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ K I Y F+++ELILFS + +RSIPS+ DGLKPG RK+LF
Sbjct: 610 -----------HDLEAKLIRYKSFIDRELILFSRAELQRSIPSMVDGLKPGQRKILFCSF 658
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+ +E+KV+Q G V+ HSAYHHGEQSL +TII +AQ+FVG NNINLL P GQFGT
Sbjct: 659 KKKLYKEIKVSQFIGYVSLHSAYHHGEQSLANTIIGMAQDFVGGNNINLLNPNGQFGT 716
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 77/127 (60%), Gaps = 1/127 (0%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D+++ D + V M PDK+ M GL K FKL + ++ S+M FD G + K+DT
Sbjct: 881 DFRQNGDDAIIDIEVKMKPDKVASV-MQGLFKKFKLTSIVSTSNMHLFDAEGKIKKYDTP 939
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
QIL+EFY +R++YY +RK Y+ L L L N+ RFI+ +G++ + NRKK E++
Sbjct: 940 EQILEEFYPLRMDYYQRRKKYMLANLERLLLILDNKVRFILGVVNGEIIMINRKKAELLI 999
Query: 339 ELIKRKY 345
EL ++ +
Sbjct: 1000 ELKQKGF 1006
>gi|328697364|ref|XP_003240317.1| PREDICTED: DNA topoisomerase 2-like [Acyrthosiphon pisum]
Length = 333
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/98 (67%), Positives = 84/98 (85%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYKEY+TDTT+KFV+TM+P+KL KAE +G+HK FKL ++ ++SMCAFD+ VL K++ T
Sbjct: 236 DYKEYNTDTTIKFVITMNPEKLQKAENEGIHKFFKLHASIGLTSMCAFDKDCVLKKYEAT 295
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQAR 316
QIL+EFYAVRL++Y KRK YLEG+LGAEA KLTNQAR
Sbjct: 296 QQILREFYAVRLDFYGKRKAYLEGMLGAEAAKLTNQAR 333
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/66 (89%), Positives = 64/66 (96%)
Query: 125 VLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIG 184
VLFTC+KRND+RE+KVAQLAGSVAEHSAYHHGE SLMSTI+NLAQN+VGSNNINLLQPIG
Sbjct: 9 VLFTCIKRNDKREIKVAQLAGSVAEHSAYHHGEVSLMSTIVNLAQNYVGSNNINLLQPIG 68
Query: 185 QFGTFL 190
QFGT L
Sbjct: 69 QFGTRL 74
>gi|448930450|gb|AGE54015.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus IL-3A]
Length = 479
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 102/157 (64%), Gaps = 13/157 (8%)
Query: 34 FKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRRRKEMGIGEDYLYTKTTKAITYTE 93
F ++ D+ + I +F+K ++RK W+T + E G D+ + ++
Sbjct: 4 FTWTSDSGEL-IDRSFNKTRAEDRKEWMTAY--------EPGNQLDH----KKPEVPVSD 50
Query: 94 FVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAY 153
F++KELILFS D ERSIPS+ DG KP RKVL++ KRN +VKVAQ +G VAEHSAY
Sbjct: 51 FIDKELILFSRYDLERSIPSVVDGFKPSQRKVLYSAFKRNLTTDVKVAQFSGYVAEHSAY 110
Query: 154 HHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
HHGE SL TI+NLAQ++VGSNNIN L P GQFG+ L
Sbjct: 111 HHGEVSLQGTIVNLAQDYVGSNNINWLLPEGQFGSRL 147
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 8/125 (6%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+D++E H+DT V F + D + +D + KL+TT+ ++M AFD G + K+DT
Sbjct: 301 SDFREKHSDTDVLFEI----DFVGNPNID----ILKLETTIRSTNMHAFDPSGKIKKYDT 352
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
I+++++ VR Y KRK YL L N+ RFI + ++ I + + +
Sbjct: 353 PLDIIRDWFEVRRNLYVKRKAYLLEDLTHRTNIAQNKHRFITMVNNDEIVINKKHESVIS 412
Query: 338 AELIK 342
AEL K
Sbjct: 413 AELEK 417
>gi|157866980|ref|XP_001682045.1| mitochondrial DNA topoisomerase II [Leishmania major strain
Friedlin]
gi|68125496|emb|CAJ03357.1| mitochondrial DNA topoisomerase II [Leishmania major strain
Friedlin]
Length = 1236
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 107/178 (60%), Gaps = 10/178 (5%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+ E KEYF++ME++ + D + F V+ RK W+T
Sbjct: 595 GLGTSTTAEGKEYFADMEKNVMQLTVDA-RDHQLLDSVFDAAEVEWRKEWMT-------- 645
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
K + ++ K +T EFV+KE++ F+ + N R+IP DGLKP RK+L+ L
Sbjct: 646 -KANAFQGEVDIDRSKKTLTIPEFVHKEMVHFALVGNARAIPHCVDGLKPSQRKILWAML 704
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+R++ KVAQL+G ++E SA+HHGE SL TI+ +AQNF G NNINLL P GQFG+
Sbjct: 705 RRHNSEASKVAQLSGYISEASAFHHGEASLQETIVKMAQNFTGGNNINLLVPEGQFGS 762
>gi|448931142|gb|AGE54705.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus KS1B]
Length = 479
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 75/146 (51%), Positives = 95/146 (65%), Gaps = 12/146 (8%)
Query: 45 IRMAFSKKLVDERKTWLTTWMEECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSN 104
I +F+K ++RK W+T + E G D+ + +F++KELILFS
Sbjct: 14 IDRSFNKSRAEDRKEWMTAY--------EPGNQLDH----KKPEVPVPDFIDKELILFSR 61
Query: 105 MDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTI 164
D ERSIPS+ DG KP RKVL++ KRN +VKVAQ +G VAEHSAYHHGE SL TI
Sbjct: 62 YDLERSIPSVVDGFKPSQRKVLYSAFKRNLTTDVKVAQFSGYVAEHSAYHHGEVSLQGTI 121
Query: 165 INLAQNFVGSNNINLLQPIGQFGTFL 190
+NLAQ++VGSNNIN L P GQFG+ L
Sbjct: 122 VNLAQDYVGSNNINWLLPEGQFGSRL 147
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 8/125 (6%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+D++E H+DT V F + D + +D + KL+TT+ ++M AFD G + K+DT
Sbjct: 301 SDFREKHSDTDVLFEI----DFVGNPNID----ILKLETTIRSTNMHAFDPSGKIKKYDT 352
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
I+++++ VR Y KRK YL L N+ RFI + ++ I + + +
Sbjct: 353 PLDIIRDWFEVRRNLYVKRKAYLLEDLTHRTNIAQNKHRFITMVNNDEIVINKKHESVIS 412
Query: 338 AELIK 342
AEL K
Sbjct: 413 AELEK 417
>gi|18266788|sp|O61078.2|TOP2_LEICH RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
II
gi|6453822|gb|AAC05295.2| DNA topoisomerase II [Leishmania chagasi]
Length = 1236
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 110/179 (61%), Gaps = 12/179 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHI-RMAFSKKLVDERKTWLTTWMEECR 69
GLGTST+ E KEYF++ME++ + + + D D + F V+ RK W+T
Sbjct: 595 GLGTSTTAEGKEYFADMEKN--IMQLTVDARDHQLLDSVFDAAEVEWRKEWMT------- 645
Query: 70 RRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
K + ++ K +T EFV+KE++ F+ + N R+IP DGLKP RK+L+
Sbjct: 646 --KANAFQGEVDIDRSKKTLTIPEFVHKEMVHFALVGNARAIPHCVDGLKPSQRKILWAM 703
Query: 130 LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
L+R++ KVAQL+G ++E SA+HHGE SL TI+ +AQNF G NNINLL P GQFG+
Sbjct: 704 LRRHNSEASKVAQLSGYISEASAFHHGEASLQETIVKMAQNFTGGNNINLLVPEGQFGS 762
>gi|146082133|ref|XP_001464455.1| mitochondrial DNA topoisomerase II [Leishmania infantum JPCM5]
gi|134068547|emb|CAM66843.1| mitochondrial DNA topoisomerase II [Leishmania infantum JPCM5]
Length = 1236
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 110/179 (61%), Gaps = 12/179 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHI-RMAFSKKLVDERKTWLTTWMEECR 69
GLGTST+ E KEYF++ME++ + + + D D + F V+ RK W+T
Sbjct: 595 GLGTSTTAEGKEYFADMEKN--IMQLTVDARDHQLLDSVFDAAEVEWRKEWMT------- 645
Query: 70 RRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
K + ++ K +T EFV+KE++ F+ + N R+IP DGLKP RK+L+
Sbjct: 646 --KANAFQGEIDIDRSKKTLTIPEFVHKEMVHFALVGNARAIPHCVDGLKPSQRKILWAM 703
Query: 130 LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
L+R++ KVAQL+G ++E SA+HHGE SL TI+ +AQNF G NNINLL P GQFG+
Sbjct: 704 LRRHNSEASKVAQLSGYISEASAFHHGEASLQETIVKMAQNFTGGNNINLLVPEGQFGS 762
>gi|398012922|ref|XP_003859654.1| mitochondrial DNA topoisomerase II [Leishmania donovani]
gi|322497870|emb|CBZ32946.1| mitochondrial DNA topoisomerase II [Leishmania donovani]
Length = 1236
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 110/179 (61%), Gaps = 12/179 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHI-RMAFSKKLVDERKTWLTTWMEECR 69
GLGTST+ E KEYF++ME++ + + + D D + F V+ RK W+T
Sbjct: 595 GLGTSTTAEGKEYFADMEKN--IMQLTVDARDHQLLDSVFDAAEVEWRKEWMT------- 645
Query: 70 RRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
K + ++ K +T EFV+KE++ F+ + N R+IP DGLKP RK+L+
Sbjct: 646 --KANAFQGEIDIDRSKKTLTIPEFVHKEMVHFALVGNARAIPHCVDGLKPSQRKILWAM 703
Query: 130 LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
L+R++ KVAQL+G ++E SA+HHGE SL TI+ +AQNF G NNINLL P GQFG+
Sbjct: 704 LRRHNSEASKVAQLSGYISEASAFHHGEASLQETIVKMAQNFTGGNNINLLVPEGQFGS 762
>gi|448931888|gb|AGE55449.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus MA-1E]
Length = 479
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 101/157 (64%), Gaps = 13/157 (8%)
Query: 34 FKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRRRKEMGIGEDYLYTKTTKAITYTE 93
F ++ D+ + I +F+K ++RK W+T + E G D+ + +
Sbjct: 4 FTWTSDSGEL-IDRSFNKTRAEDRKEWMTAY--------EPGNQLDH----KKPEVPVPD 50
Query: 94 FVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAY 153
F++KELILFS D ERSIPS+ DG KP RKVL++ KRN +VKVAQ +G VAEHSAY
Sbjct: 51 FIDKELILFSRYDLERSIPSVVDGFKPSQRKVLYSAFKRNLTTDVKVAQFSGYVAEHSAY 110
Query: 154 HHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
HHGE SL TI+NLAQ++VGSNNIN L P GQFG+ L
Sbjct: 111 HHGEVSLQGTIVNLAQDYVGSNNINWLLPEGQFGSRL 147
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 8/125 (6%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+D++E H+DT V F + D + +D + KL+TT+ ++M AFD G + K+DT
Sbjct: 301 SDFREKHSDTDVLFEI----DFVGNPNID----ILKLETTIRSTNMHAFDPSGKIKKYDT 352
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
I+++++ VR Y KRK YL L N+ RFI + ++ I + + +
Sbjct: 353 PLDIIRDWFEVRRNLYVKRKAYLLEDLTHRTNIAQNKHRFITMVNNDEIIINKKHESVIS 412
Query: 338 AELIK 342
AEL K
Sbjct: 413 AELEK 417
>gi|4929497|gb|AAD34021.1|AF150876_1 DNA topoisomerase II [Leishmania donovani]
Length = 1236
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 110/179 (61%), Gaps = 12/179 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHI-RMAFSKKLVDERKTWLTTWMEECR 69
GLGTST+ E KEYF++ME++ + + + D D + F V+ RK W+T
Sbjct: 595 GLGTSTTAEGKEYFADMEKN--IMQLTVDARDHQLLDSVFDAAEVEWRKEWMT------- 645
Query: 70 RRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
K + ++ K +T EFV+KE++ F+ + N R+IP DGLKP RK+L+
Sbjct: 646 --KANAFQGEIDIDRSKKTLTIPEFVHKEMVHFALVGNARAIPHCVDGLKPSQRKILWAM 703
Query: 130 LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
L+R++ KVAQL+G ++E SA+HHGE SL TI+ +AQNF G NNINLL P GQFG+
Sbjct: 704 LRRHNSEASKVAQLSGYISEASAFHHGEASLQETIVKMAQNFTGGNNINLLVPEGQFGS 762
>gi|9624859|gb|AAF86355.1| DNA Topoisomerase II [Leishmania infantum]
Length = 1236
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 110/179 (61%), Gaps = 12/179 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHI-RMAFSKKLVDERKTWLTTWMEECR 69
GLGTST+ E KEYF++ME++ + + + D D + F V+ RK W+T
Sbjct: 595 GLGTSTTAEGKEYFADMEKN--IMQLTVDARDHQLLDSVFDAAEVEWRKEWMT------- 645
Query: 70 RRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
K + ++ K +T EFV+KE++ F+ + N R+IP DGLKP RK+L+
Sbjct: 646 --KANAFQGEIDIDRSKKTLTIPEFVHKEMVHFALVGNARAIPHCVDGLKPSQRKILWAM 703
Query: 130 LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
L+R++ KVAQL+G ++E SA+HHGE SL TI+ +AQNF G NNINLL P GQFG+
Sbjct: 704 LRRHNSEASKVAQLSGYISEASAFHHGEASLQETIVKMAQNFTGGNNINLLVPEGQFGS 762
>gi|154334646|ref|XP_001563570.1| mitochondrial DNA topoisomerase II [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060591|emb|CAM42140.1| mitochondrial DNA topoisomerase II [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1239
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 110/179 (61%), Gaps = 12/179 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHI-RMAFSKKLVDERKTWLTTWMEECR 69
GLGTST+ E KEYF++ME++ + + + D D + F V+ RK W+T
Sbjct: 595 GLGTSTTAEGKEYFADMEKN--IMRLTVDAKDHQLLDSVFDAAEVEWRKEWMT------- 645
Query: 70 RRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
K + ++ K++T EFV+KE++ F+ + N R+IP DGLKP RK+L+
Sbjct: 646 --KANAFQGEIDIDRSKKSLTIPEFVHKEMVHFALVGNARAIPHCVDGLKPSQRKILWAM 703
Query: 130 LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
L+R+ KVAQL+G ++E SA+HHGE SL TI+ +AQNF G NNINLL P GQFG+
Sbjct: 704 LRRHSSEASKVAQLSGYISEASAFHHGEVSLQETIVKMAQNFTGGNNINLLVPEGQFGS 762
>gi|448935342|gb|AGE58893.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus NYs1]
Length = 476
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 75/146 (51%), Positives = 94/146 (64%), Gaps = 12/146 (8%)
Query: 45 IRMAFSKKLVDERKTWLTTWMEECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSN 104
I +F+K ++RK W+T + E G D+ + +F++KELILFS
Sbjct: 14 IDRSFNKSRAEDRKEWMTAY--------EPGNQLDH----KKPEVPVPDFIDKELILFSR 61
Query: 105 MDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTI 164
D ERSIPS+ DG KP RKVL+ KRN +VKVAQ +G VAEHSAYHHGE SL TI
Sbjct: 62 YDLERSIPSVVDGFKPSQRKVLYCAFKRNLTTDVKVAQFSGYVAEHSAYHHGEASLQGTI 121
Query: 165 INLAQNFVGSNNINLLQPIGQFGTFL 190
+NLAQ++VGSNNIN L P GQFG+ L
Sbjct: 122 VNLAQDYVGSNNINWLLPEGQFGSRL 147
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+D++E HTDT V F + D + +D + KL+TT+ ++M AFD YG + K+DT
Sbjct: 301 SDFREKHTDTDVLFEI----DFVGNPNID----ILKLETTIRATNMHAFDPYGKIKKYDT 352
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMI 337
I++E++ VR + Y KRK YL L N+ RFI DG++ I R + ++
Sbjct: 353 PLDIIREWFGVRKDLYVKRKAYLLEDLTHRTNIAQNKYRFITMVNDGEIIINKRNESDIS 412
Query: 338 AELIK 342
AEL K
Sbjct: 413 AELEK 417
>gi|401418313|ref|XP_003873648.1| mitochondrial DNA topoisomerase II [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489879|emb|CBZ25140.1| mitochondrial DNA topoisomerase II [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1236
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 109/179 (60%), Gaps = 12/179 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHI-RMAFSKKLVDERKTWLTTWMEECR 69
GLGTST+ E KEYF++ME++ + + + D D + F V+ RK W+T
Sbjct: 595 GLGTSTTAEGKEYFADMEKN--IMQLTVDARDHQLLDSVFDAAEVEWRKEWMT------- 645
Query: 70 RRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
K + ++ K +T EFV+KE++ F+ + N R+IP DGLKP RK+L+
Sbjct: 646 --KANAFQGEIDIDRSKKMLTIPEFVHKEMVHFALVGNARAIPHCVDGLKPSQRKILWAM 703
Query: 130 LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
L+R+ KVAQL+G ++E SA+HHGE SL TI+ +AQNF G NNINLL P GQFG+
Sbjct: 704 LRRHSSEASKVAQLSGYISEASAFHHGEASLQETIVKMAQNFTGGNNINLLVPEGQFGS 762
>gi|325588260|gb|ADZ31962.1| DNA topoisomerase II [Trypanosoma rangeli]
Length = 1224
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 106/178 (59%), Gaps = 10/178 (5%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+ E KEYF +M++H + ND + F + V+ RK W+T
Sbjct: 591 GLGTSTTAEGKEYFKDMDKHTMRLMLD-RNDHKLLDSVFDSQEVEWRKDWMT-------- 641
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
K + ++ K +T ++FV+KE++ F+ N R++ DGLKP RK+L+ L
Sbjct: 642 -KANAYTGEVDIDRSKKTLTLSDFVHKEMVHFALAGNARALAHAVDGLKPSQRKILWALL 700
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+R+ KVAQL+G ++E SA+HHGE SL TII +AQNF G NNINLL P GQFG+
Sbjct: 701 RRSSNEAAKVAQLSGYISEASAFHHGEMSLQETIIKMAQNFTGGNNINLLVPEGQFGS 758
>gi|221110139|ref|XP_002163496.1| PREDICTED: DNA topoisomerase 2-like [Hydra magnipapillata]
Length = 1315
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 96/158 (60%), Gaps = 12/158 (7%)
Query: 31 RILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRRRKEMGIGEDYLYTKTTKAIT 90
R F Y A I AF LV+ RK WL +++ + L K I
Sbjct: 767 RQSFTYMKSKSHAAITKAFDGSLVNLRKEWLQKFVKS-----------NLLEYKPKMQIP 815
Query: 91 YTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRN-DRREVKVAQLAGSVAE 149
Y++F++K+LI FSN+DN+RSIPS+ DG KP R +L+ C KR +EVKV+QLAG V+E
Sbjct: 816 YSDFIDKDLIFFSNVDNDRSIPSMIDGFKPSQRMILYCCFKRGRHSKEVKVSQLAGYVSE 875
Query: 150 HSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFG 187
++ YHHGE SL II +AQNF GSNNIN+L P G FG
Sbjct: 876 NTDYHHGEASLQGAIIGMAQNFPGSNNINILVPNGNFG 913
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 60/107 (56%)
Query: 239 KLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKD 298
KL+K + L K + +L+++++ F+ G +TK+++ + +L EFY RLE Y KRK+
Sbjct: 1075 KLYKTGVGNLDKFLNMTQSLSVTNLNMFNSKGKMTKYNSISDVLYEFYEYRLEMYQKRKE 1134
Query: 299 YLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKY 345
+ L + T + +FI E ++I +K E+IA+L + Y
Sbjct: 1135 FFFLKLQNDLDISTYKVKFIREYLAKTIKIAKKKVVEVIAQLETKGY 1181
>gi|135994|sp|P27570.1|TOP2_CRIFA RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
II
gi|11001|emb|CAA42182.1| kinetoplast-associated type II DNA topoisomerase (toptIImt)
[Crithidia fasciculata]
Length = 1239
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 107/178 (60%), Gaps = 10/178 (5%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+ E KEYF++MER+ ++ D + F V+ RK W++
Sbjct: 595 GLGTSTTAEGKEYFADMERN-VMRLVVEPKDHRLLDSVFDSAEVEWRKEWMS-------- 645
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
K + ++ K +T +FV+KE++ F+ + N R+IP DGLKP RK+L+ L
Sbjct: 646 -KANAFQGEVDIDRSKKLLTIGDFVHKEMVHFALVGNARAIPHCVDGLKPSQRKILWAML 704
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR+ KVAQL+G ++E S++HHGE SL TI+ +AQNF G NNINLL P GQFG+
Sbjct: 705 KRHSSEAAKVAQLSGYISEVSSFHHGEASLQETIVKMAQNFTGGNNINLLVPEGQFGS 762
>gi|340056049|emb|CCC50378.1| putative DNA topoisomerase II, fragment [Trypanosoma vivax Y486]
Length = 1195
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 110/180 (61%), Gaps = 14/180 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERH--RILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEEC 68
GLGTST+ E KEYF +M++H R+L S D + F + V+ RK W+T
Sbjct: 591 GLGTSTTAEGKEYFQDMDKHTMRLLVDRS---DHKLLDHVFDSQEVEWRKDWMT------ 641
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
K + ++ K++T +EFV+KE++ F+ + N R++ DGLKP RK+L+
Sbjct: 642 ---KANAFTGEVDIDRSKKSLTVSEFVHKEMVHFALVGNARALAHSVDGLKPSQRKILWA 698
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
L+R+ KVAQL+G ++E S++HHGE SL T+I +AQNF G NNINLL P GQFG+
Sbjct: 699 LLRRSGNESAKVAQLSGYISEASSFHHGESSLQETMIKMAQNFTGGNNINLLIPEGQFGS 758
>gi|357441041|ref|XP_003590798.1| Defensin/CCP-like protein [Medicago truncatula]
gi|355479846|gb|AES61049.1| Defensin/CCP-like protein [Medicago truncatula]
Length = 1176
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 108/177 (61%), Gaps = 17/177 (9%)
Query: 13 GTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRRRK 72
G S+++E +EYF ++ +HR F + D D+ I++AFSKK +E + W+
Sbjct: 522 GLSSAQEVREYFQDLGKHRAYFVWD-DKDETSIKLAFSKK-AEEWEAWI----------- 568
Query: 73 EMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDN-ERSIPSLCDGLKPGSRKVLFTCLK 131
G + K I Y FVNKEL LFS+M N +RSIPS+ DGL G RK LF +
Sbjct: 569 --GNSQPGTCNYERKVINYRNFVNKEL-LFSSMKNLQRSIPSVVDGLTLGQRKTLFCSFE 625
Query: 132 RNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
N ++ +V +L V EHS H+G+QS+ STII +AQ+FVGSNNINLL P GQFGT
Sbjct: 626 MNLTKQTEVCRLTAYVTEHSYCHYGQQSIASTIIGMAQDFVGSNNINLLIPYGQFGT 682
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Query: 229 VKFVVTMSPDKLHKAEMDG-LHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYA 287
V F V + +++ E D L K F L T++ S+M FD G + K++T QIL+EF
Sbjct: 852 VNFKVNVKQEEIATIEKDEELRKKFNLTCTISTSNMYLFDAEGKIKKYNTPEQILEEFCT 911
Query: 288 VRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKYDS 347
+RL+YY +RK YL L + +FI + NR + E++ E++K+ +
Sbjct: 912 LRLKYYVRRKQYLVKNFTQLLRSLRIKQKFISNIVNEKFNPINR-RAELLIEILKKGKSA 970
Query: 348 DP 349
+P
Sbjct: 971 EP 972
>gi|37731960|gb|AAO23340.1| type II topoisomerase [Strigomonas culicis]
Length = 1230
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 105/179 (58%), Gaps = 12/179 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHI-RMAFSKKLVDERKTWLTTWMEECR 69
GLGTST+ E KEYFSNME++ + K D D + F + V+ RK W+T
Sbjct: 595 GLGTSTTAEGKEYFSNMEQN--IMKLQVDPKDHKLLDSVFDSQEVEWRKDWMT------- 645
Query: 70 RRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
K D ++ K ++ +FV+KE++ F+ N R+I DGLKP RK+L+
Sbjct: 646 --KANAFNGDVDIDRSKKVLSIPDFVHKEMVHFALAGNARAIAHSVDGLKPSQRKILWAL 703
Query: 130 LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
KR KVAQL+G ++E S++HHGE SL TI+ +AQNF G NNINLL P GQFG+
Sbjct: 704 FKRGKAESAKVAQLSGYISEVSSFHHGEMSLQETIVKMAQNFTGGNNINLLVPEGQFGS 762
>gi|343474588|emb|CCD13796.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 1227
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 108/180 (60%), Gaps = 14/180 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERH--RILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEEC 68
GLGTST+ E KEYF +ME+H R+L ND + F + V+ RK W+T
Sbjct: 591 GLGTSTTVEGKEYFKDMEKHTMRLLVDR---NDHKLLDNVFDSQEVEWRKDWMT------ 641
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
K + ++ K +T +FV+KE++ F+ + N R++ DGLKP RK+L+
Sbjct: 642 ---KANAFTGEVDIDRSKKTLTVPDFVHKEMVHFALVGNARALAHSVDGLKPSQRKILWA 698
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
L+R+ KVAQL+G ++E SA+HHGE SL T+I +AQNF G NNINLL P GQFG+
Sbjct: 699 LLRRSGNDAAKVAQLSGYISEASAFHHGESSLQETMIKMAQNFTGGNNINLLVPEGQFGS 758
>gi|441432261|ref|YP_007354303.1| DNA topoisomerase 2 [Acanthamoeba polyphaga moumouvirus]
gi|440383341|gb|AGC01867.1| DNA topoisomerase 2 [Acanthamoeba polyphaga moumouvirus]
Length = 1253
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 135/260 (51%), Gaps = 64/260 (24%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILF-----KYSGDNDDAH--------------------- 44
GLGTST+ EA+E F+++++ RI + K S +N+
Sbjct: 600 GLGTSTAAEAQECFTDLDKKRIRYFWESRKISEENNSTENKKSKKKVKSDFIEEESDTIS 659
Query: 45 --------------IRMAFSKKLVDERKTWLTTWMEECRRRKEMGIGEDYLYTKTTKAIT 90
I +AF KK D+RK W+ T+ +Y+ + K ++
Sbjct: 660 DIYKPRCKDLCEDAITLAFDKKREDDRKLWINTYNPN-----------NYI-DNSQKRVS 707
Query: 91 YTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRND-RREVKVAQLAGSVAE 149
Y +F+++ELI FS DN RSIP++ DGLKP RKVL+ + + E+KV++L G+V++
Sbjct: 708 YYDFIHRELISFSVDDNMRSIPNIADGLKPSQRKVLYGSEEEGIYKEEIKVSELQGAVSK 767
Query: 150 HSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL----------FIFESTN-L 198
+ YHHGEQS+ TII +AQN+VGSNNINLL P GQFGT L +IF N L
Sbjct: 768 RTKYHHGEQSMTETIIKMAQNYVGSNNINLLLPNGQFGTRLSGGKDNASARYIFTQLNQL 827
Query: 199 SGAVVNALDFGSGGWRFESN 218
+ + DF +FE N
Sbjct: 828 TKYIFIQHDFDVLQHQFEDN 847
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 73/132 (55%), Gaps = 5/132 (3%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDG-LHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+Y E T+ V F +T P KL + G L K KL + + +S+M F+ +G + K+++
Sbjct: 1022 NYVEDCTEIRVSFTITFHPGKLSQLIKQGELDKGLKLISHIRLSNMHLFNEHGKIKKYNS 1081
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRI----ENRKK 333
+IL F +RL+ Y KRKD+L G E L + +FI DG + I +++KK
Sbjct: 1082 YTEILNNFIQIRLDLYQKRKDHLLGKWKKEMDMLKWKVKFIEYVIDGTIIIFKNGKSKKK 1141
Query: 334 KEMIAELIKRKY 345
+E++ +L + K+
Sbjct: 1142 EEIMNKLEELKF 1153
>gi|397581930|gb|EJK52100.1| hypothetical protein THAOC_28668 [Thalassiosira oceanica]
Length = 1027
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/178 (45%), Positives = 105/178 (58%), Gaps = 18/178 (10%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS EAK+YFSN+E H I F R++ D+ R
Sbjct: 670 GLGTSTSNEAKQYFSNLESHVIEFN----------RLSTDIPDEDDDDVGEEEGASIPRS 719
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
G+D + +K +++ ++ +S D +RS+P + DGLK RKVLF C
Sbjct: 720 ------GDDLIQRFFSKKFDKKQWM--KIRAYSTYDVDRSLPHVFDGLKTSQRKVLFACF 771
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
K+ + E+KVAQLAG + EHSAYHHGEQSL STII +AQN+VG+NNINLL P GQFGT
Sbjct: 772 KKKLKNEIKVAQLAGYIGEHSAYHHGEQSLHSTIIGMAQNYVGTNNINLLYPSGQFGT 829
>gi|407844394|gb|EKG01941.1| mitochondrial DNA topoisomerase II, putative [Trypanosoma cruzi]
Length = 1231
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 105/178 (58%), Gaps = 10/178 (5%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+ E KEYF +M++H + ND + F + V+ RK W+T
Sbjct: 591 GLGTSTTAEGKEYFKDMDKHTMRLVVE-RNDHKLLDSVFDSQEVEWRKDWMT-------- 641
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
K + ++ K +T +FV+KE++ F+ N R++ DGLKP RK+L+ +
Sbjct: 642 -KANAYTGEVDIDRSKKTLTVPDFVHKEMVHFALAGNARALAHAVDGLKPSQRKILWAIM 700
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+R+ KVAQL+G ++E SA+HHGE SL TII +AQNF G NNINLL P GQFG+
Sbjct: 701 RRSGNESAKVAQLSGYISEVSAFHHGEMSLQETIIKMAQNFTGGNNINLLIPEGQFGS 758
>gi|71650226|ref|XP_813815.1| mitochondrial DNA topoisomerase II [Trypanosoma cruzi strain CL
Brener]
gi|70878735|gb|EAN91964.1| mitochondrial DNA topoisomerase II, putative [Trypanosoma cruzi]
Length = 1230
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 105/178 (58%), Gaps = 10/178 (5%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+ E KEYF +M++H + ND + F + V+ RK W+T
Sbjct: 591 GLGTSTTAEGKEYFKDMDKHTMRLVVE-RNDHKLLDSVFDSQEVEWRKDWMT-------- 641
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
K + ++ K +T +FV+KE++ F+ N R++ DGLKP RK+L+ +
Sbjct: 642 -KANAYTGEVDIDRSKKTLTVPDFVHKEMVHFALAGNARALAHAVDGLKPSQRKILWAIM 700
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+R+ KVAQL+G ++E SA+HHGE SL TII +AQNF G NNINLL P GQFG+
Sbjct: 701 RRSGNESAKVAQLSGYISEVSAFHHGEMSLQETIIKMAQNFTGGNNINLLIPEGQFGS 758
>gi|371945085|gb|AEX62906.1| DNA topoisomerase 2 [Moumouvirus Monve]
Length = 1007
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 137/261 (52%), Gaps = 66/261 (25%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILF-----KYSGDN------------------------- 40
GLGTST+ EA+E F+++++ RI + K S +N
Sbjct: 600 GLGTSTAAEAQECFTDLDKKRIRYFWESRKISEENISTENKKSKKKVKSDFIEEESDTIS 659
Query: 41 -----------DDAHIRMAFSKKLVDERKTWLTTWMEECRRRKEMGIGEDYLYTKTTKAI 89
+DA I +AF KK D+RK W+ T+ +Y+ + K +
Sbjct: 660 DIYKPRCKDLCEDA-ITLAFDKKREDDRKLWINTYNPN-----------NYI-DNSQKRV 706
Query: 90 TYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRND-RREVKVAQLAGSVA 148
+Y +F+++ELI FS DN RSIP++ DGLKP RKVL+ + + E+KV++L G+V+
Sbjct: 707 SYYDFIHRELISFSVDDNMRSIPNIADGLKPSQRKVLYGSEEEGIYKEEIKVSELQGAVS 766
Query: 149 EHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL----------FIFESTN- 197
+ + YHHGEQS+ TII +AQN+VGSNNINLL P GQFGT L +IF N
Sbjct: 767 KRTKYHHGEQSMTETIIKMAQNYVGSNNINLLLPNGQFGTRLSGGKDNASARYIFTQLNQ 826
Query: 198 LSGAVVNALDFGSGGWRFESN 218
L+ + DF +FE N
Sbjct: 827 LTKYIFIQHDFDVLQHQFEDN 847
>gi|71666676|ref|XP_820295.1| mitochondrial DNA topoisomerase II [Trypanosoma cruzi strain CL
Brener]
gi|70885633|gb|EAN98444.1| mitochondrial DNA topoisomerase II, putative [Trypanosoma cruzi]
Length = 1231
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 105/178 (58%), Gaps = 10/178 (5%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+ E KEYF +M++H + ND + F + V+ RK W+T
Sbjct: 591 GLGTSTTAEGKEYFKDMDKHTMRLVVE-RNDHKLLDSVFDSQEVEWRKDWMT-------- 641
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
K + ++ K +T +FV+KE++ F+ N R++ DGLKP RK+L+ +
Sbjct: 642 -KANAYTGEVDIDRSKKTLTVPDFVHKEMVHFALAGNARALAHAVDGLKPSQRKILWAIM 700
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+R+ KVAQ++G ++E SA+HHGE SL TII +AQNF G NNINLL P GQFG+
Sbjct: 701 RRSGNESAKVAQMSGYISEVSAFHHGEMSLQETIIKMAQNFTGGNNINLLIPEGQFGS 758
>gi|448825356|ref|YP_007418287.1| DNA topoisomerase 2 [Megavirus lba]
gi|444236541|gb|AGD92311.1| DNA topoisomerase 2 [Megavirus lba]
Length = 1072
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 118/219 (53%), Gaps = 53/219 (24%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILF------------------------------------ 34
GLGTST EA+E F+++++ RI +
Sbjct: 416 GLGTSTQAEAQECFTDLDKKRIKYFWESKRVNNIEEDEEESKPKPKVKSEFIDEESDVIS 475
Query: 35 -KYSGDNDDA---HIRMAFSKKLVDERKTWLTTWMEECRRRKEMGIGEDYLYTKTTKAIT 90
Y N D I +AF KK ++RK W+ T+ +Y+ K ++
Sbjct: 476 EIYKPKNKDICEDAITLAFDKKRENDRKIWVNTYNP-----------NNYI-DNAQKRVS 523
Query: 91 YTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRND-RREVKVAQLAGSVAE 149
Y +F+++ELI FS DN RSIP++ DG KP RKV + ++ + E+KV++L G+V++
Sbjct: 524 YYDFIHQELISFSVDDNLRSIPNIMDGFKPSQRKVFYGSVEEGIYKEEIKVSELQGAVSK 583
Query: 150 HSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+ YHHGEQSL STI+N+AQN+VGSNNINLL P GQFGT
Sbjct: 584 RTKYHHGEQSLTSTIVNMAQNYVGSNNINLLMPNGQFGT 622
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 5/126 (3%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDG-LHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
Y E T + F + P KL + G L KL + + +++M F+ YG + K+D+
Sbjct: 843 YTEDCTQIRISFTINFHPGKLSELIKTGKLDDGLKLVSPIQLTNMHLFNEYGKIKKYDSY 902
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRI----ENRKKK 334
+IL+ F VRL+ Y KRKD+L G E L + +FI+ +G + I +++KK
Sbjct: 903 GEILRNFSKVRLDLYQKRKDHLLGKWRKEMDILKWKVKFIMYVIEGKIIIFKNGKSKKKD 962
Query: 335 EMIAEL 340
E++ +L
Sbjct: 963 EIMQKL 968
>gi|371943700|gb|AEX61528.1| DNA topoisomerase 2 [Megavirus courdo7]
Length = 1249
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 118/219 (53%), Gaps = 53/219 (24%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILF------------------------------------ 34
GLGTST EA+E F+++++ RI +
Sbjct: 601 GLGTSTQAEAQECFTDLDKKRIKYFWESKRVNNIEEDEEESKPKPKVKSEFIDEESDVIS 660
Query: 35 -KYSGDNDDA---HIRMAFSKKLVDERKTWLTTWMEECRRRKEMGIGEDYLYTKTTKAIT 90
Y N D I +AF KK ++RK W+ T+ +Y+ K ++
Sbjct: 661 EIYKPKNKDICEDAITLAFDKKRENDRKIWVNTYNP-----------NNYI-DNAQKRVS 708
Query: 91 YTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRND-RREVKVAQLAGSVAE 149
Y +F+++ELI FS DN RSIP++ DG KP RKV + ++ + E+KV++L G+V++
Sbjct: 709 YYDFIHQELISFSVDDNLRSIPNIMDGFKPSQRKVFYGSVEEGIYKEEIKVSELQGAVSK 768
Query: 150 HSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+ YHHGEQSL STI+N+AQN+VGSNNINLL P GQFGT
Sbjct: 769 RTKYHHGEQSLTSTIVNMAQNYVGSNNINLLMPNGQFGT 807
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 5/126 (3%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDG-LHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
Y E T + F + P KL + G L KL + + +++M F+ YG + K+D+
Sbjct: 1028 YTEDCTQIRISFTINFHPGKLSELIKTGKLDDGLKLVSPIQLTNMHLFNEYGKIKKYDSY 1087
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRI----ENRKKK 334
+IL+ F VRL+ Y KRKD+L G E L + +FI+ +G + I +++KK
Sbjct: 1088 GEILRNFSKVRLDLYQKRKDHLLGKWRKEMDILKWKVKFIMYVIEGKIIIFKNGKSKKKD 1147
Query: 335 EMIAEL 340
E++ +L
Sbjct: 1148 EIMQKL 1153
>gi|425701284|gb|AFX92446.1| DNA topoisomerase 2 [Megavirus courdo11]
Length = 1249
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 118/219 (53%), Gaps = 53/219 (24%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILF------------------------------------ 34
GLGTST EA+E F+++++ RI +
Sbjct: 601 GLGTSTQAEAQECFTDLDKKRIKYFWESKRVNNIEEDEEESKPKPKVKSEFIDEESDVIS 660
Query: 35 -KYSGDNDDA---HIRMAFSKKLVDERKTWLTTWMEECRRRKEMGIGEDYLYTKTTKAIT 90
Y N D I +AF KK ++RK W+ T+ +Y+ K ++
Sbjct: 661 EIYKPKNKDICEDAITLAFDKKRENDRKIWVNTYNP-----------NNYI-DNAQKRVS 708
Query: 91 YTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRND-RREVKVAQLAGSVAE 149
Y +F+++ELI FS DN RSIP++ DG KP RKV + ++ + E+KV++L G+V++
Sbjct: 709 YYDFIHQELISFSVDDNLRSIPNIMDGFKPSQRKVFYGSVEEGIYKEEIKVSELQGAVSK 768
Query: 150 HSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+ YHHGEQSL STI+N+AQN+VGSNNINLL P GQFGT
Sbjct: 769 RTKYHHGEQSLTSTIVNMAQNYVGSNNINLLMPNGQFGT 807
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 5/126 (3%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDG-LHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
Y E T + F + P KL + G L KL + + +++M F+ YG + K+D+
Sbjct: 1028 YTEDCTQIRISFTINFHPGKLSELIKTGKLDDGLKLVSPIQLTNMHLFNEYGKIKKYDSY 1087
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRI----ENRKKK 334
+IL+ F VRL+ Y KRKD+L G E L + +FI+ +G + I +++KK
Sbjct: 1088 GEILRNFSKVRLDLYQKRKDHLLGKWRKEMDILKWKVKFIMYVIEGKIIIFKNGKSKKKD 1147
Query: 335 EMIAEL 340
E++ +L
Sbjct: 1148 EIMQKL 1153
>gi|71744648|ref|XP_803868.1| DNA topoisomerase II [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831119|gb|EAN76624.1| DNA topoisomerase II [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 1221
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 109/180 (60%), Gaps = 14/180 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERH--RILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEEC 68
GLGTST+ E KEYF +ME+H R+L S D + F + V+ RK W+T
Sbjct: 591 GLGTSTTAEGKEYFKDMEKHTMRLLVDRS---DHKLLDNVFDSQEVEWRKDWMT------ 641
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
K + ++ K +T T+FV+KE++ F+ + N R++ DGLKP RK+++
Sbjct: 642 ---KANAFTGEVDIDRSKKMLTVTDFVHKEMVHFALVGNARALAHSVDGLKPSQRKIIWA 698
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
++R+ KVAQL+G ++E SA+HHGE SL T+I +AQ+F G NN+NLL P GQFG+
Sbjct: 699 LMRRSGNEAAKVAQLSGYISEASAFHHGETSLQETMIKMAQSFTGGNNVNLLVPEGQFGS 758
>gi|261331231|emb|CBH14221.1| DNA topoisomerase II, putative [Trypanosoma brucei gambiense
DAL972]
Length = 1221
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 109/180 (60%), Gaps = 14/180 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERH--RILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEEC 68
GLGTST+ E KEYF +ME+H R+L S D + F + V+ RK W+T
Sbjct: 591 GLGTSTTAEGKEYFKDMEKHTMRLLVDRS---DHKLLDNVFDSQEVEWRKDWMT------ 641
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
K + ++ K +T T+FV+KE++ F+ + N R++ DGLKP RK+++
Sbjct: 642 ---KANAFTGEVDIDRSKKMLTVTDFVHKEMVHFALVGNARALAHSVDGLKPSQRKIIWA 698
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
++R+ KVAQL+G ++E SA+HHGE SL T+I +AQ+F G NN+NLL P GQFG+
Sbjct: 699 LMRRSGNEAAKVAQLSGYISEASAFHHGETSLQETMIKMAQSFTGGNNVNLLVPEGQFGS 758
>gi|135998|sp|P12531.1|TOP2_TRYBB RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
II
gi|162305|gb|AAA30256.1| DNA topoisomerase II [Trypanosoma brucei]
Length = 1221
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 109/180 (60%), Gaps = 14/180 (7%)
Query: 11 GLGTSTSKEAKEYFSNMERH--RILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEEC 68
GLGTST+ E KEYF +ME+H R+L S D + F + V+ RK W+T
Sbjct: 591 GLGTSTTAEGKEYFKDMEKHTMRLLVDRS---DHKLLDNVFDSQEVEWRKDWMT------ 641
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
K + ++ K +T T+FV+KE++ F+ + N R++ DGLKP RK+++
Sbjct: 642 ---KANAFTGEVDIDRSKKMLTVTDFVHKEMVHFALVGNARALAHSVDGLKPSQRKIIWA 698
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
++R+ KVAQL+G ++E SA+HHGE SL T+I +AQ+F G NN+NLL P GQFG+
Sbjct: 699 LMRRSGNEAAKVAQLSGYISEASAFHHGETSLQETMIKMAQSFTGGNNVNLLVPEGQFGS 758
>gi|363540235|ref|YP_004894454.1| mg403 gene product [Megavirus chiliensis]
gi|350611400|gb|AEQ32844.1| DNA topoisomerase 2 [Megavirus chiliensis]
Length = 1257
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 118/219 (53%), Gaps = 53/219 (24%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILF------------------------------------ 34
GLGTST EA+E F+++++ RI +
Sbjct: 601 GLGTSTQAEAQECFTDLDKKRIKYFWESKRVNNIEEDEEESKPKPKVKSEFIDEESDVIS 660
Query: 35 -KYSGDNDDA---HIRMAFSKKLVDERKTWLTTWMEECRRRKEMGIGEDYLYTKTTKAIT 90
Y N D I +AF KK ++RK W+ T+ +Y+ K ++
Sbjct: 661 EIYKPKNKDICEDAITLAFDKKRENDRKIWVNTYNP-----------NNYI-DNAQKRVS 708
Query: 91 YTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRND-RREVKVAQLAGSVAE 149
Y +F+++ELI FS DN RSIP++ DG KP RKV + ++ + E+KV++L G+V++
Sbjct: 709 YYDFIHQELISFSVDDNLRSIPNIMDGFKPSQRKVFYGSVEEGIYKEEIKVSELQGAVSK 768
Query: 150 HSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+ YHHGEQSL STI+N+AQN+VGSNNINLL P GQFGT
Sbjct: 769 RTKYHHGEQSLTSTIVNMAQNYVGSNNINLLMPNGQFGT 807
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 5/126 (3%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDG-LHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
Y E T + F + P KL + G L KL + + +++M F+ YG + K+D+
Sbjct: 1028 YTEDCTQIRISFTINFHPGKLSELIKTGKLDDGLKLVSPIQLTNMHLFNEYGKIKKYDSY 1087
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRI----ENRKKK 334
+IL+ F VRL+ Y KRKD+L G E L + +FI+ +G + I +++KK
Sbjct: 1088 GEILRNFSKVRLDLYQKRKDHLLGKWRKEMDILKWKVKFIMYVIEGKIIIFKNGKSKKKD 1147
Query: 335 EMIAEL 340
E++ +L
Sbjct: 1148 EIMQKL 1153
>gi|267151|sp|P30190.1|TOP2_TRYCR RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
II
gi|162307|gb|AAA85575.1| DNA topoisomerase II [Trypanosoma cruzi]
gi|737876|prf||1923363A DNA topoisomerase II
Length = 1232
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 104/178 (58%), Gaps = 10/178 (5%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
LGTST+ E KEYF +M++H + ND + F + V+ RK W+T
Sbjct: 591 ALGTSTTAEGKEYFKDMDKHTMRLVVE-RNDHKLLDSVFDSQEVEWRKDWMT-------- 641
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
K + ++ K +T +FV+KE++ F+ N R++ DGLKP RK+L+ +
Sbjct: 642 -KANAYTGEVDIDRSKKTLTVPDFVHKEMVHFALAGNARALAHAVDGLKPSQRKILWAIM 700
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+R+ KVAQL+G ++E SA+HHGE SL TII +AQNF G NNINLL P GQFG+
Sbjct: 701 RRSGNESAKVAQLSGYISEVSAFHHGEMSLQETIIKMAQNFTGGNNINLLIPEGQFGS 758
>gi|297803548|ref|XP_002869658.1| hypothetical protein ARALYDRAFT_329101 [Arabidopsis lyrata subsp.
lyrata]
gi|297315494|gb|EFH45917.1| hypothetical protein ARALYDRAFT_329101 [Arabidopsis lyrata subsp.
lyrata]
Length = 1089
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 111/184 (60%), Gaps = 19/184 (10%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGT T +EA EY ++++ H F ++GDND I +AF + + +K WL EE +
Sbjct: 567 GLGTCTYEEACEYLAHIDNHTKEFFWAGDNDGRSIDVAFKTEDIAAKKIWL----EEMPK 622
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ IG + + ++Y F+N+ELI + ERSIPSL DG + RKV+++
Sbjct: 623 ---VYIG------RLNRRMSYGSFINEELIFAAQAILERSIPSLIDGFRLAQRKVVYSLF 673
Query: 131 KR------NDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIG 184
KR N ++KV QLA V+EH+A+HH E+SL TII +AQ FVGSNN+NLLQP
Sbjct: 674 KREQEANVNFEEKIKVTQLASYVSEHAAHHHCERSLSRTIIRMAQTFVGSNNVNLLQPFC 733
Query: 185 QFGT 188
FG+
Sbjct: 734 LFGS 737
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHK-AEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
YK +T++ +++S +++ + K+ +L TT+ ++M +R+ VLTK+++
Sbjct: 897 YKNDSDNTSIDIKLSLSEEQMKRFLNEKNPRKLLRLSTTIRTNNMHLLNRFNVLTKYESP 956
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRI 328
++IL+EF+ RL Y RK+++ +L E KL + +G++ I
Sbjct: 957 DKILEEFFEERLNMYRVRKEHMVQILTFERDKLECKVAIFQRVLNGEINI 1006
>gi|397622491|gb|EJK66700.1| hypothetical protein THAOC_12353 [Thalassiosira oceanica]
Length = 141
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 77/102 (75%)
Query: 87 KAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGS 146
+ + Y+E NKE+ +S D +RS+P + DGLK RKVLF C K+ + E+KVAQLAG
Sbjct: 16 QGLQYSELFNKEIRAYSTYDVDRSLPHVFDGLKTSQRKVLFACFKKKLKNEIKVAQLAGY 75
Query: 147 VAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+ EHSAYHHGEQSL STII +AQN+VG+NNINLL P GQFGT
Sbjct: 76 IGEHSAYHHGEQSLHSTIIGMAQNYVGTNNINLLYPSGQFGT 117
>gi|451927544|gb|AGF85422.1| topoisomerase 2 [Moumouvirus goulette]
Length = 1263
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 132/263 (50%), Gaps = 68/263 (25%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDN------------------------------ 40
GLGTST+ EA+E F+++++ RI + +
Sbjct: 600 GLGTSTAAEAQECFTDLDKKRIRYFWESKRVSEEKKKENTENKKSKKKVKSDFIEEESDI 659
Query: 41 -------------DDAHIRMAFSKKLVDERKTWLTTWMEECRRRKEMGIGEDYLYTKTTK 87
+DA I +AF KK D+RK W+ T+ +Y+ + K
Sbjct: 660 ISEIYKPRCKDLCEDA-ITLAFDKKREDDRKLWINTYNPN-----------NYI-DNSQK 706
Query: 88 AITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRND-RREVKVAQLAGS 146
++Y +F+++ELI FS DN RSIP++ DG KP RKV + + + E+KV++L G+
Sbjct: 707 RVSYYDFIHRELISFSVDDNMRSIPNMADGFKPSQRKVFYGSEEEGIYKEEIKVSELQGA 766
Query: 147 VAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL----------FIFEST 196
V++ + YHHGEQS+ TII +AQN+VGSNNINLL P GQFGT L +IF
Sbjct: 767 VSKRTKYHHGEQSMTETIIKMAQNYVGSNNINLLLPNGQFGTRLSGGKDNASARYIFTQL 826
Query: 197 N-LSGAVVNALDFGSGGWRFESN 218
N L+ + DF +FE N
Sbjct: 827 NQLAKYIFVQHDFDVLQHQFEDN 849
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 5/132 (3%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDG-LHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
+Y E T+ V F +T P KL + G L K KL + + +S+M F+ +G + K+++
Sbjct: 1027 NYVEDCTEIRVSFTITFHPGKLSQLIKQGELDKGLKLVSHIRLSNMHLFNEFGKIKKYNS 1086
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRI----ENRKK 333
+IL F VRLE Y KRKDYL G E L + +FI DG + I +++KK
Sbjct: 1087 YTEILNNFIQVRLELYQKRKDYLLGKWKKEMDMLKWKVKFIEYVIDGTIIIFKNGKSKKK 1146
Query: 334 KEMIAELIKRKY 345
+E++ +L + K+
Sbjct: 1147 EEIMKKLEELKF 1158
>gi|356927887|gb|AET42677.1| DNA topoisomerase II [Emiliania huxleyi virus 202]
Length = 1103
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 105/178 (58%), Gaps = 11/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST K+AK+YF+ +++ I +G +++AF K+ ER+ +L +
Sbjct: 577 GLGTSTDKDAKQYFTEWDKNVITINNNGQPSKDAVKLAFDAKMSAERRDYLANQYDP--- 633
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ Y+K++ I F+ +L+ FSN DN RSIP + DG K G RKV+F L
Sbjct: 634 ------DANIDYSKSSTTIE--RFIYDDLMHFSNSDNLRSIPKMLDGQKAGQRKVVFYAL 685
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+ E KVAQ+AG+ A+ + YHHGE SL +TII +A + GS+N+ LL P GQFG+
Sbjct: 686 NHVGKTEAKVAQMAGTAAQVTQYHHGEVSLANTIIGMAATYTGSHNLPLLYPSGQFGS 743
>gi|347482390|gb|AEO98331.1| topoisomerase II [Emiliania huxleyi virus 203]
Length = 1103
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 103/178 (57%), Gaps = 11/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST K+AK+YF+ ++ I +G +++AF K+ ER+ +L
Sbjct: 577 GLGTSTDKDAKQYFNEWSKNVITISNTGQPSTEAMKLAFDAKMSAERREYLA-------N 629
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ DY + ++ T F+ +L+ FSN DN RSIP + DG K G RKV+F L
Sbjct: 630 QYNPNANVDY----SAQSTTIERFIYDDLMHFSNYDNIRSIPKMLDGQKAGQRKVVFYAL 685
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+ E KVAQ+AG+ A+ + YHHGE SL +TII +A + GS+N+ LL P GQFG+
Sbjct: 686 NHVGKNEAKVAQMAGTAAQVTQYHHGEVSLANTIIGMAATYTGSHNLPLLYPSGQFGS 743
>gi|347600951|gb|AEP15437.1| DNA topoisomerase II [Emiliania huxleyi virus 207]
gi|347601587|gb|AEP16072.1| DNA topoisomerase II [Emiliania huxleyi virus 208]
gi|357973017|gb|AET98290.1| DNA topoisomerase II [Emiliania huxleyi virus 201]
Length = 1103
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 103/178 (57%), Gaps = 11/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST K+AK+YF+ ++ I +G +++AF K+ ER+ +L
Sbjct: 577 GLGTSTDKDAKQYFNEWSKNVITISNTGQPSTEAMKLAFDAKMSAERREYLA-------N 629
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ DY + ++ T F+ +L+ FSN DN RSIP + DG K G RKV+F L
Sbjct: 630 QYNPNANVDY----SAQSTTIERFIYDDLMHFSNYDNIRSIPKMLDGQKAGQRKVVFYAL 685
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+ E KVAQ+AG+ A+ + YHHGE SL +TII +A + GS+N+ LL P GQFG+
Sbjct: 686 NHVGKNEAKVAQMAGTAAQVTQYHHGEVSLANTIIGMAATYTGSHNLPLLYPSGQFGS 743
>gi|73852918|ref|YP_294202.1| putative DNA topoisomerase [Emiliania huxleyi virus 86]
gi|72415634|emb|CAI65871.1| putative DNA topoisomerase [Emiliania huxleyi virus 86]
gi|283481658|emb|CAZ69774.1| putative DNA topoisomerase [Emiliania huxleyi virus 99B1]
Length = 1103
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 100/178 (56%), Gaps = 11/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST K+AK+YF+ ++ I +G +++AF K+ ER+ +L
Sbjct: 577 GLGTSTDKDAKQYFTEWSKNVITINNTGQPSTEAMKLAFDAKMSAERREYLANQYNPNAN 636
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ ++ T F+ +L+ FSN DN RSIP + DG K G RKV+F L
Sbjct: 637 -----------INYSAQSTTIERFIYDDLMHFSNYDNIRSIPKMLDGQKAGQRKVVFYAL 685
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+ E KVAQ+AG+ A+ + YHHGE SL +TII +A + GS+N+ LL P GQFG+
Sbjct: 686 NHVGKNEAKVAQMAGTAAQVTQYHHGEVSLANTIIGMAATYTGSHNLPLLYPSGQFGS 743
>gi|347481998|gb|AEO97984.1| topoisomerase II [Emiliania huxleyi virus 84]
Length = 1103
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 103/178 (57%), Gaps = 11/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST K+AK+YF+ ++ I +G +++AF K+ ER+ +L
Sbjct: 577 GLGTSTDKDAKQYFTEWSKNVITINNTGQPSTDAMKLAFDAKMSAERREYLA-------N 629
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ +Y + ++ T F+ +L+ FSN DN RSIP + DG K G RKV+F L
Sbjct: 630 QYNPNANVNY----SAQSTTIERFIYDDLMHFSNYDNIRSIPKMLDGQKAGQRKVVFYAL 685
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+ E KVAQ+AG+ A+ + YHHGE SL +TII +A + GS+N+ LL P GQFG+
Sbjct: 686 NHVGKNEAKVAQMAGTAAQVTQYHHGEVSLANTIIGMAATYTGSHNLPLLYPSGQFGS 743
>gi|347600614|gb|AEP15101.1| DNA topoisomerase [Emiliania huxleyi virus 88]
Length = 1103
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 103/178 (57%), Gaps = 11/178 (6%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST K+AK+YF+ ++ I +G +++AF K+ ER+ +L
Sbjct: 577 GLGTSTDKDAKQYFTEWSKNVITINNTGQPSTDAMKLAFDAKMSAERREYLA-------N 629
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ +Y + ++ T F+ +L+ FSN DN RSIP + DG K G RKV+F L
Sbjct: 630 QYNPNANVNY----SAQSTTIERFIYDDLMHFSNYDNIRSIPKMLDGQKAGQRKVVFYAL 685
Query: 131 KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+ E KVAQ+AG+ A+ + YHHGE SL +TII +A + GS+N+ LL P GQFG+
Sbjct: 686 NHVGKNEAKVAQMAGTAAQVTQYHHGEVSLANTIIGMAATYTGSHNLPLLYPSGQFGS 743
>gi|413923557|gb|AFW63489.1| hypothetical protein ZEAMMB73_491338 [Zea mays]
Length = 787
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/83 (71%), Positives = 67/83 (80%)
Query: 106 DNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTII 165
D +RSIPS+ DGLKPG RK+LF KRN +E KVAQ +G V+EHSAYHHGEQSL TII
Sbjct: 3 DLQRSIPSMVDGLKPGQRKILFCSFKRNFVKEAKVAQFSGYVSEHSAYHHGEQSLAGTII 62
Query: 166 NLAQNFVGSNNINLLQPIGQFGT 188
+AQNFVGSNNINL+ P GQFGT
Sbjct: 63 GMAQNFVGSNNINLMYPSGQFGT 85
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Query: 226 DTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEF 285
D ++F T+S ++ A +GL K FKL TT+ S+M FD G + K+DT QIL+EF
Sbjct: 264 DVYIQF--TLSEKNMNIAMEEGLVKKFKLTTTIGTSNMHLFDSDGKIRKYDTPEQILEEF 321
Query: 286 YAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKY 345
+RLE+Y KRK+ L + + KL N+ RFI D ++ + NRK+ ++ EL ++ +
Sbjct: 322 CHLRLEFYCKRKEALLKSIKLDLKKLENKVRFIRCVVDNEIIVNNRKRADLFLELRQKNF 381
Query: 346 DSDPVK 351
D P K
Sbjct: 382 DPFPKK 387
>gi|357141707|ref|XP_003572319.1| PREDICTED: DNA topoisomerase 2-like [Brachypodium distachyon]
Length = 551
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 135/269 (50%), Gaps = 33/269 (12%)
Query: 110 SIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQ 169
S+PS+ DGL G RKVLFT K N + +V+ LA + +AY G+QS TIIN+AQ
Sbjct: 10 SVPSVVDGLNRGQRKVLFTAFKNNLDKHTRVSWLADCAVKQAAYSCGQQSAEQTIINMAQ 69
Query: 170 NFVGSNNINLLQPIGQFGTFLFIFEST--------NLSGAVVNALDFGSGGWRFE----- 216
+F+GSNN+NL P G FG E +S V + +G +F
Sbjct: 70 DFLGSNNLNLFDPSGPFGARYQGGEDALDGCGRIEKISTTVEGSTYSTTGVIKFVNETTL 129
Query: 217 ----------SNDYKEYHTDTTVKFVVTMSPDKLH---------KAEMDGLHKVFKLQTT 257
+ DY ++ ++ + ++ D ++ + + K F L TT
Sbjct: 130 LITELPIHCWTKDYLDFLMSLRIECIRDINHDNINVQVEEKNTENVTQESMEKKFNLITT 189
Query: 258 LAISSMCAFDRYGV-LTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQAR 316
+ ++M FDR G+ + K+ T +IL+EF+ +RLE Y KRK L + K+TN+ R
Sbjct: 190 VGTTNMHLFDRDGINIRKYKTPEEILEEFFGLRLECYEKRKKAQLDSLDLDLWKITNKVR 249
Query: 317 FIVEKCDGDLRIENRKKKEMIAELIKRKY 345
FI+ GD+ + +R+ +++ EL ++ +
Sbjct: 250 FILGVGRGDITVIDRETDDLVLELYRKGF 278
>gi|311977868|ref|YP_003986988.1| DNA topoisomerase 2 [Acanthamoeba polyphaga mimivirus]
gi|76363498|sp|Q5UQE6.1|TOP2_MIMIV RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
II
gi|55417096|gb|AAV50746.1| topoisomerase II [Acanthamoeba polyphaga mimivirus]
gi|308204860|gb|ADO18661.1| DNA topoisomerase 2 [Acanthamoeba polyphaga mimivirus]
gi|339061418|gb|AEJ34722.1| topoisomerase II [Acanthamoeba polyphaga mimivirus]
Length = 1263
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 95/145 (65%), Gaps = 13/145 (8%)
Query: 47 MAFSKKLVDERKTWLTTWMEECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMD 106
+AF+ D+RK W+ T+ + +YL + K I+Y +F++KELI FS D
Sbjct: 685 LAFAGGREDDRKIWINTYNPD-----------NYL-DPSKKRISYYDFIHKELITFSVDD 732
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLKRND-RREVKVAQLAGSVAEHSAYHHGEQSLMSTII 165
RS+P+L DG KP RKV + +++N ++E+KV+ L G V+ + YHHG+QSL STI+
Sbjct: 733 VLRSVPNLMDGFKPSHRKVFYGSVEKNIYKQEIKVSDLTGFVSNMTKYHHGDQSLSSTIV 792
Query: 166 NLAQNFVGSNNINLLQPIGQFGTFL 190
+AQN+VGSNN+NLL P+G FG+ L
Sbjct: 793 GMAQNYVGSNNLNLLMPLGMFGSRL 817
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 62/126 (49%), Gaps = 5/126 (3%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDG-LHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
Y E TD + F + P KL G L KL L +++M F+ G + K+DT
Sbjct: 1034 YSEDCTDIRISFTIVFHPGKLDTLIKSGKLDTGLKLVKPLNLTNMHLFNEKGKIKKYDTY 1093
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRI----ENRKKK 334
IL+ F VRL Y KRKDYL G E L + +FI +G + I +++KK+
Sbjct: 1094 GAILRNFVKVRLNLYQKRKDYLLGKWKKEMDILKWKVKFIEYVIEGKIVIFKNGKSKKKE 1153
Query: 335 EMIAEL 340
E++ L
Sbjct: 1154 EVLKAL 1159
>gi|351737633|gb|AEQ60668.1| Topoisomerase II [Acanthamoeba castellanii mamavirus]
gi|398257307|gb|EJN40915.1| topoisomerase II [Acanthamoeba polyphaga lentillevirus]
Length = 1263
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 95/145 (65%), Gaps = 13/145 (8%)
Query: 47 MAFSKKLVDERKTWLTTWMEECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMD 106
+AF+ D+RK W+ T+ + +YL + K I+Y +F++KELI FS D
Sbjct: 685 LAFAGGREDDRKIWINTYNPD-----------NYL-DPSKKRISYYDFIHKELITFSVDD 732
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLKRND-RREVKVAQLAGSVAEHSAYHHGEQSLMSTII 165
RS+P+L DG KP RKV + +++N ++E+KV+ L G V+ + YHHG+QSL STI+
Sbjct: 733 VLRSVPNLMDGFKPSHRKVFYGSVEKNIYKQEIKVSDLTGFVSNMTKYHHGDQSLSSTIV 792
Query: 166 NLAQNFVGSNNINLLQPIGQFGTFL 190
+AQN+VGSNN+NLL P+G FG+ L
Sbjct: 793 GMAQNYVGSNNLNLLMPLGMFGSRL 817
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 62/126 (49%), Gaps = 5/126 (3%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDG-LHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
Y E TD + F + P KL G L KL L +++M F+ G + K+DT
Sbjct: 1034 YSEDCTDIRISFTIVFHPGKLDTLIKSGKLDTGLKLVKPLNLTNMHLFNEKGKIKKYDTY 1093
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRI----ENRKKK 334
IL+ F VRL Y KRKDYL G E L + +FI +G + I +++KK+
Sbjct: 1094 GAILRNFVKVRLNLYQKRKDYLLGKWKKEMDILKWKVKFIEYVIEGKIVIFKNGKSKKKE 1153
Query: 335 EMIAEL 340
E++ L
Sbjct: 1154 EVLKAL 1159
>gi|327409604|ref|YP_004347024.1| DNA topoisomerase II [Lausannevirus]
gi|326784778|gb|AEA06912.1| DNA topoisomerase II [Lausannevirus]
Length = 1090
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 102/187 (54%), Gaps = 23/187 (12%)
Query: 9 IAGLGTSTSKEAKEYFSNMERHRILFKYSGDN-DDAHIRMAFSKKLVDERKTWLTTWMEE 67
+ GLG+S ++ ++Y + + L KY D + + +AF+K D+RK WL +E
Sbjct: 584 LKGLGSSKPEDGRKYLAEQK----LLKYVSDGTEKEYFELAFAKSKADDRKKWLAEKVEP 639
Query: 68 CRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLF 127
C T+ + + F+ ++L + +N RSIPS+ DGLKP RKVL+
Sbjct: 640 C--------------TQYEGDMPLSRFIKEKLSSYHRANNRRSIPSVYDGLKPSQRKVLY 685
Query: 128 TCLKRN---DRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGS-NNINLLQPI 183
C N + KV +LAG VA + YHHGE SL TI+ +AQNFVGS NNI LL P
Sbjct: 686 ACFASNVIGPSKTEKVERLAGKVASIAGYHHGEVSLSGTIVGMAQNFVGSGNNIPLLYPD 745
Query: 184 GQFGTFL 190
G +GT L
Sbjct: 746 GSYGTRL 752
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTN 279
+++ +TD FV+T + D M L KL ++ +M A D V KF +T
Sbjct: 908 FEDKYTDEEAAFVITTTKD--FTPTMSNL----KLSKAFSLKNMTALDEDDVPVKFRSTE 961
Query: 280 QILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFI 318
+IL+++ RLE Y KRK+ L L E +K N+ RF+
Sbjct: 962 EILEKYCDARLELYQKRKEKLLNDLSQEIVKQANKQRFL 1000
>gi|321470330|gb|EFX81307.1| hypothetical protein DAPPUDRAFT_317722 [Daphnia pulex]
Length = 591
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/84 (67%), Positives = 67/84 (79%)
Query: 105 MDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTI 164
M+ SIPS+ DGL+P RKVLFTC KRND+ +V+V +LAGSVA SAY GE SLM TI
Sbjct: 1 MEKYHSIPSVMDGLRPTQRKVLFTCFKRNDKDKVEVIKLAGSVAADSAYREGEASLMGTI 60
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
I LAQ+FVGSNN+NLL PIG+FGT
Sbjct: 61 IGLAQDFVGSNNLNLLVPIGEFGT 84
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 88/142 (61%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
D++E+HT TVKF VTMS K+ +A+ +GL+K F+LQ+T I+SM D G + +
Sbjct: 248 DFQEHHTGNTVKFTVTMSEAKMRQAKDEGLYKAFQLQSTHYITSMVLCDPSGSPKIYYSY 307
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
QIL++FY VRL+ Y KRK+Y G L A + KL+NQ RF+ E D L + N+ +
Sbjct: 308 QQILEDFYPVRLKLYEKRKNYFSGYLQAISKKLSNQFRFVCEVIDDVLIVFNKGNILEVE 367
Query: 339 ELIKRKYDSDPVKSWKMKQNKE 360
+L R YD DPV WK N++
Sbjct: 368 DLRHRNYDPDPVSVWKRTNNRK 389
>gi|291335074|gb|ADD94703.1| hypothetical protein [uncultured phage MedDCM-OCT-S09-C23]
Length = 417
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 99/183 (54%), Gaps = 16/183 (8%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS++KE E F R++ D D +RM FS D+RK WL+ + +
Sbjct: 42 GLGTSSNKEVMETFG----ERMVEYVHDDLADEAMRMVFSSNRSDDRKKWLSDFDPDANV 97
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+ G + + ++F+N+ +I FS D RSIP L DGLK RKVL+
Sbjct: 98 DIKTG---------SIVQMDLSQFINERMIHFSIDDCGRSIPHLLDGLKESQRKVLYAVF 148
Query: 131 KRN---DRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFG 187
K+ + +KV QLAG AEH+ YHHGEQ L TIINLA + +G NNI L GQFG
Sbjct: 149 KKKLSYKSKTLKVNQLAGFTAEHTGYHHGEQCLYDTIINLATDIMGKNNIPYLYRDGQFG 208
Query: 188 TFL 190
+ L
Sbjct: 209 SRL 211
>gi|402586744|gb|EJW80681.1| DNA topoisomerase 2, partial [Wuchereria bancrofti]
Length = 750
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 74/105 (70%), Gaps = 11/105 (10%)
Query: 125 VLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIG 184
VLFTC KR D++EVKVAQLAG+V E SAYHHGE SLMSTI+NLAQ++VGSNNINLL PIG
Sbjct: 1 VLFTCFKRADKKEVKVAQLAGAVGEMSAYHHGEASLMSTIVNLAQDYVGSNNINLLLPIG 60
Query: 185 QFGTFL----------FIFESTN-LSGAVVNALDFGSGGWRFESN 218
QFGT L +IF N ++ A+ A+D + FE N
Sbjct: 61 QFGTRLQGGKDSASPRYIFTQLNPVTRALFPAVDENVLRFLFEEN 105
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 54/72 (75%)
Query: 218 NDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
D+KEYHTDTTVKF+V M+P KL +AEM+GLHK+FKLQT + ISSM FD G L +F
Sbjct: 227 QDFKEYHTDTTVKFLVKMNPAKLREAEMEGLHKIFKLQTAINISSMVLFDPLGCLRRFSN 286
Query: 278 TNQILKEFYAVR 289
+I KEF+ VR
Sbjct: 287 VEEICKEFFEVR 298
>gi|15078758|ref|NP_149508.1| 045L [Invertebrate iridescent virus 6]
gi|82039172|sp|Q9QSK1.1|TOP2_IIV6 RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
II
gi|5725647|gb|AAD48151.1|AF083915_5 045L [Invertebrate iridescent virus 6]
Length = 1132
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 100/182 (54%), Gaps = 15/182 (8%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRM--AFSKKLVDERKTWLTTWMEEC 68
GLGT+ ++ + F + ++F +D+AH M AF + DERK WL +
Sbjct: 624 GLGTTKHEDVPKIFG---KKMVVFNI---DDNAHENMEKAFKDEEADERKEWLKQYNPNA 677
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
R D + + F+N+ELI FS D +RS+P L DGLK RKV+F
Sbjct: 678 RTF-------DLDSPNKILQLNISTFINEELIKFSIEDCKRSLPHLIDGLKESQRKVIFG 730
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+ N + +KVAQL VA+ + Y HGEQ+L TII +AQ FVG+NNI LL+ GQFGT
Sbjct: 731 LKQWNGKNNIKVAQLGAFVAQKTDYKHGEQNLFDTIIKMAQTFVGANNIPLLEEDGQFGT 790
Query: 189 FL 190
L
Sbjct: 791 RL 792
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 223 YHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQIL 282
Y TTV F ++ H+ ++ L KL++ + S+M FD G + K++T N I+
Sbjct: 957 YSEVTTVNFKISSE----HELTIENL----KLRSYIHTSNMVMFDHEGKIHKYETLNGIM 1008
Query: 283 KEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIK 342
+ F R++ Y KR+ Y+ L N+ RF+ + + ++I ++ + + +L+
Sbjct: 1009 QRFCKERIKIYEKRRQYMLQKLNKSLTISENKKRFMEDVMNQKIKILLQEDEVVHQQLLD 1068
Query: 343 RKYDSD 348
Y D
Sbjct: 1069 MNYYKD 1074
>gi|284504201|ref|YP_003406916.1| DNA topoisomerase II [Marseillevirus]
gi|282935639|gb|ADB03954.1| DNA topoisomerase II [Marseillevirus]
Length = 1089
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 100/185 (54%), Gaps = 23/185 (12%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDN-DDAHIRMAFSKKLVDERKTWLTTWMEECR 69
GLG+S ++ ++Y S + L Y D + A +AFSK +ERKTWL
Sbjct: 585 GLGSSRPEDGRKYLSEQK----LVSYVADGTEGAWFDLAFSKNKSNERKTWLAG------ 634
Query: 70 RRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTC 129
+ D Y ++ ++F++K L + +N RSIPS+ DGLKP RKVL+ C
Sbjct: 635 -----SLTPDETYEG---ELSLSDFIDKRLSTYHRANNRRSIPSVFDGLKPSQRKVLYAC 686
Query: 130 LKRN---DRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVG-SNNINLLQPIGQ 185
N ++ V +L G VA + YHHGE+SL TII +AQ+FVG NN+ LL P G
Sbjct: 687 FSSNIIGKNKKKHVDRLTGEVASVAGYHHGEKSLTETIIGMAQDFVGCGNNVRLLNPDGS 746
Query: 186 FGTFL 190
FGT L
Sbjct: 747 FGTRL 751
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTN 279
+++ +TD F++ + D + K KL TT ++ +M A D KF T +
Sbjct: 907 FEDKYTDEKASFIINTTKDFIPTI------KNLKLSTTFSLRNMTALDEKDNPVKFSTVD 960
Query: 280 QILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAE 339
IL ++ RL Y KRKD + L E LK N+ RF+ + DG L E ++++E++ +
Sbjct: 961 DILLKYCPERLRLYQKRKDKMLADLSQEILKQANKQRFLKDVLDGIL--EMKQQEELLLQ 1018
>gi|321473415|gb|EFX84382.1| hypothetical protein DAPPUDRAFT_3936 [Daphnia pulex]
Length = 269
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 2/187 (1%)
Query: 170 NFVGSNNINLLQPIGQFGTFLFI-FESTNLSGAVVNALDFGSGGWRFESNDYKEYHTDTT 228
NFV S + +L P T L + + N +V+ L GS DY+E+HTD
Sbjct: 82 NFVISGELAVLSPTTIEITELPVDVPTENYKKSVLEKLLCGSEECPPIITDYQEHHTDNN 141
Query: 229 VKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAV 288
V+FVVTM+ + + E +G H+ FKLQ+ ++ SM +D G L +++ + I+ EFY V
Sbjct: 142 VRFVVTMTEKMMQQVESEGFHRAFKLQSVYSLRSMLLYDSNGSLKTYNSVDDIMNEFYEV 201
Query: 289 RLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKE-MIAELIKRKYDS 347
RLE Y KR+DY G + A +L NQ F+ E L +++ KK + ++ EL +R Y
Sbjct: 202 RLELYRKRRDYFSGKVEALRARLVNQNNFLTEISSKVLIVDSEKKFDVLLEELRRRNYAP 261
Query: 348 DPVKSWK 354
DP+ +W+
Sbjct: 262 DPLIAWE 268
>gi|321450878|gb|EFX62728.1| hypothetical protein DAPPUDRAFT_67762 [Daphnia pulex]
Length = 255
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 91/144 (63%), Gaps = 3/144 (2%)
Query: 220 YKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTN 279
YKEYHTDTTV+FVV M+ +K+ +AE G H +F+LQ T ++ +D G L +D+ N
Sbjct: 46 YKEYHTDTTVRFVVNMTEEKMQQAESQGFHDLFRLQCTHTVTPTLLYDPNGFLKNYDSNN 105
Query: 280 QILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAE 339
ILK ++ VRL + +RK L G L A KLTN+ R++ +GDL I NRKK ++ E
Sbjct: 106 DILKTYFDVRLNLFEERKKLLTGELQASCKKLTNEIRYVHAIWNGDL-IVNRKKINVLVE 164
Query: 340 LIKR-KYDSDPVKSWKMKQNKENA 362
++R +D DP+++ +MK +N
Sbjct: 165 ELRRLNFDPDPLRA-RMKNQNDNV 187
>gi|300709311|ref|XP_002996821.1| hypothetical protein NCER_100008 [Nosema ceranae BRL01]
gi|239606147|gb|EEQ83150.1| hypothetical protein NCER_100008 [Nosema ceranae BRL01]
Length = 713
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 81/137 (59%), Gaps = 12/137 (8%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST+K+A EYF N+ H F D D I +AFSKK VD RKTWL
Sbjct: 577 GLGTSTAKDAVEYFKNLPLHVKNFCPMTDEDKESIELAFSKKKVDSRKTWL--------- 627
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCL 130
+G+ + + I+ ++F+NKELILFS DN RSIP++ DG KPG RK+LFTC
Sbjct: 628 ---LGLEQGTFLDQRPSEISISDFINKELILFSMADNFRSIPNVLDGFKPGQRKILFTCF 684
Query: 131 KRNDRREVKVAQLAGSV 147
K+ R++K L G +
Sbjct: 685 KKIFIRKLKYQSLLGQL 701
>gi|339906076|ref|YP_004732873.1| hypothetical protein WIV_gp090 [Wiseana iridescent virus]
gi|308051947|gb|ADO00434.1| hypothetical protein [Wiseana iridescent virus]
Length = 1135
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 105/191 (54%), Gaps = 20/191 (10%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDND-DAHIRMAFSKKLVDERKTWLTTW----- 64
GLGT SK+ ++F + L KY+ D+ + I F + ++RK WL +
Sbjct: 617 GLGTINSKDVPQFFG-----KKLVKYTHDSKCEEVINKVFKDENANDRKVWLNNFNPKVS 671
Query: 65 ---MEECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPG 121
++ KE G++ + ++F+ E+I FS D +RS+ S DGLK
Sbjct: 672 KYCLDTLPELKEKRDGQNVKLIN----VKISDFMENEMIKFSYEDCKRSLGSCIDGLKES 727
Query: 122 SRKVLFTCLKR--NDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINL 179
RKV++ K+ N +KVAQL+G +AE + Y HGEQ+L TII AQ+FVG+NNI L
Sbjct: 728 QRKVIYALRKKFKNKTDFIKVAQLSGYIAEQTDYKHGEQNLCETIIKFAQDFVGTNNITL 787
Query: 180 LQPIGQFGTFL 190
L+P GQFGT L
Sbjct: 788 LEPDGQFGTRL 798
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 252 FKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYL 300
KL ++L ++M F+ V+TK+ T I +E++ RL YY RK YL
Sbjct: 979 IKLTSSLHTTNMVLFNCKDVITKYQTIGDIFEEYFKTRLHYYDLRKKYL 1027
>gi|428171891|gb|EKX40804.1| hypothetical protein GUITHDRAFT_113071 [Guillardia theta CCMP2712]
Length = 1372
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 82/138 (59%), Gaps = 10/138 (7%)
Query: 2 NTIHDVMIAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWL 61
N H GLGT+T++E KEYFSN+E HR+ F Y G DD I +AFSK DERK W+
Sbjct: 869 NKFHIKYYKGLGTNTAQEGKEYFSNLESHRLSFVYDGKQDDNSITLAFSKD-ADERKKWI 927
Query: 62 TTWMEECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPG 121
+ + +D++ K +++T+FV KEL+ +S +R+IPSL DG KP
Sbjct: 928 QDHAD--------SVVKDFIDHSKDK-LSFTDFVYKELVQYSYASLQRAIPSLIDGCKPS 978
Query: 122 SRKVLFTCLKRNDRREVK 139
RK+L+ C KR +E+K
Sbjct: 979 QRKILYACFKRKLNKEIK 996
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 8/127 (6%)
Query: 226 DTTVKFVVT-----MSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQ 280
DTT+ F M KL+K E L KV KL +++ +M F G + ++
Sbjct: 1147 DTTITFTEDAEKKLMESGKLNKQE---LMKVLKLINPISLGNMVLFAADGKIKQYYNPLD 1203
Query: 281 ILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAEL 340
IL +++ R+ Y +RK E L A+A++ TNQ RF+ G+ + E + K E+ EL
Sbjct: 1204 ILADYFPERMRLYERRKQMQEARLAAQAMRFTNQYRFLGAVASGEFKFEGKSKDELEKEL 1263
Query: 341 IKRKYDS 347
++ +++
Sbjct: 1264 KEKGFNT 1270
>gi|297790981|ref|XP_002863375.1| hypothetical protein ARALYDRAFT_916718 [Arabidopsis lyrata subsp.
lyrata]
gi|297309210|gb|EFH39634.1| hypothetical protein ARALYDRAFT_916718 [Arabidopsis lyrata subsp.
lyrata]
Length = 286
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 72/101 (71%), Gaps = 3/101 (2%)
Query: 89 ITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVA 148
I+Y +F+N ELI F + ER IPS+ DGLK SRK+LFT K N ++V V QLA V+
Sbjct: 14 ISYHDFINFELIYFFQANLERCIPSVADGLKLSSRKILFTLFKCN--KKVTVEQLASDVS 71
Query: 149 EHSAYHHGEQSLMSTIINLAQNFVGS-NNINLLQPIGQFGT 188
+ +YHH +QSL TI+ +AQ++VGS NN+NLL P GQFG+
Sbjct: 72 KTCSYHHSQQSLAKTIVRMAQDYVGSPNNVNLLDPDGQFGS 112
>gi|109287964|ref|YP_654658.1| hypothetical protein MIV086L [Invertebrate iridescent virus 3]
gi|123862744|sp|Q196X4.1|TOP2_IIV3 RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
II
gi|106073587|gb|ABF82116.1| hypothetical protein MIV086L [Aedes taeniorhynchus iridescent
virus]
Length = 1113
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 98/190 (51%), Gaps = 27/190 (14%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWL-------TT 63
GLGT + +F + +++ + + DA + F + +ERK WL +
Sbjct: 606 GLGTIGPADVAAFFGS----KVVRYHYDEATDAAVNSVFKDENANERKEWLGRFNPRVSQ 661
Query: 64 WMEECRRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSR 123
W + R + + ++F++ E+I FS D RS+ S DG K R
Sbjct: 662 WCLDHHREAVIDL-------------KISDFMHHEMIKFSYEDCRRSLASCIDGFKESQR 708
Query: 124 KVLFTCLKR---NDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLL 180
K+++ K+ N +KVAQL+G VAE + Y HGEQ+L TI+ AQ+FVG+NN+ LL
Sbjct: 709 KIIYAVRKKFRSNSTEFIKVAQLSGYVAEQTDYKHGEQNLCETIVKFAQDFVGANNVQLL 768
Query: 181 QPIGQFGTFL 190
+P GQFGT L
Sbjct: 769 EPDGQFGTRL 778
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 262 SMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDY 299
+M FDR V+TK+DT IL ++ RL +Y RK++
Sbjct: 966 NMVLFDRENVITKYDTIGDILDHYFQTRLAFYKVRKNH 1003
>gi|321472241|gb|EFX83212.1| hypothetical protein DAPPUDRAFT_315938 [Daphnia pulex]
Length = 206
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
Query: 105 MDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTI 164
M+ ERS PSL DGLK RKVLFT L RND+ +V VA+LA SVAEH+A H+ SLM I
Sbjct: 1 MEYERSTPSLIDGLKLEQRKVLFTVLNRNDK-DVNVARLALSVAEHTALHYEPGSLMRPI 59
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ +AQ+FVGSNN++LL P GQFGT
Sbjct: 60 MWMAQDFVGSNNVSLLIPNGQFGT 83
>gi|452818404|gb|EME25761.1| DNA topoisomerase II, partial [Galdieria sulphuraria]
Length = 782
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 90/180 (50%), Gaps = 19/180 (10%)
Query: 9 IAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEEC 68
+ GLG+S+ ++ +E F+ E F +G+ D I AF K V RK W+ + E
Sbjct: 537 LKGLGSSSDQDIREDFA--EDRFEYFTINGEQDIKTIEEAFRKTQVAVRKEWILNPLSET 594
Query: 69 RRRKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFT 128
R + F+ +EL+ +S RSIPS DGLK RK L++
Sbjct: 595 RSDSVI-----------------CRFIQQELVEYSKETISRSIPSFFDGLKESQRKALWS 637
Query: 129 CLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+ + VKVAQLA A+ + Y HGE L II LAQ+FVG+NN++ + GQ G+
Sbjct: 638 SFQFASKGAVKVAQLAAHAAKITNYKHGEGCLSDVIIRLAQDFVGANNLSFFESHGQTGS 697
>gi|170064497|ref|XP_001867550.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167881880|gb|EDS45263.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 540
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/63 (74%), Positives = 51/63 (80%)
Query: 128 TCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFG 187
T +RND+REVKV QL GSVAE SAYHHGEQSL STI++L QNFV SNNINLL P QFG
Sbjct: 425 TTFERNDKREVKVTQLTGSVAEMSAYHHGEQSLCSTIVDLTQNFVSSNNINLLYPRDQFG 484
Query: 188 TFL 190
T L
Sbjct: 485 TRL 487
>gi|506869|dbj|BAA03133.1| DNA topoisomerase IIB [Rattus norvegicus]
Length = 214
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 141 AQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
AQLAGSVAE SAYHHGEQ+LM TI+NLAQNFVGSNNINLLQPIGQFGT L
Sbjct: 1 AQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRL 50
>gi|38325|emb|CAA37706.1| DNA topoisomerase II [Homo sapiens]
gi|226914|prf||1611238A DNA topoisomerase II isozyme
Length = 234
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 57/75 (76%)
Query: 285 FYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRK 344
F+ +RL YY RK++L G+LGAE+ KL NQARFI+EK G + IENR KK++I L++R
Sbjct: 1 FFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLIQMLVQRG 60
Query: 345 YDSDPVKSWKMKQNK 359
Y+SDPVK+WK Q K
Sbjct: 61 YESDPVKAWKEAQEK 75
>gi|409090|dbj|BAA03132.1| DNA topoisomerase IIA [Rattus norvegicus]
Length = 214
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/50 (88%), Positives = 46/50 (92%)
Query: 141 AQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
AQLAGSVAE S+YHHGE SLM TIINLAQNFVGSNN+NLLQPIGQFGT L
Sbjct: 1 AQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRL 50
>gi|402590951|gb|EJW84881.1| hypothetical protein WUBG_04209 [Wuchereria bancrofti]
Length = 319
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 87/140 (62%), Gaps = 2/140 (1%)
Query: 215 FESNDYKEYHTDTTVKFV--VTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVL 272
++ +Y+E HT++ V F+ V P K ++ L+++ KL++ + +SM FD+ VL
Sbjct: 112 IKNGNYEELHTESNVHFILHVVDKPLLSDKKQIKALNRLLKLRSVASENSMILFDKKNVL 171
Query: 273 TKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRK 332
K+D+T +I +EF+ VR + Y +R++ ++ + + NQ RF+ +G++ IE +
Sbjct: 172 QKYDSTREIFQEFFEVRRQKYMERRECELIIMDGKLKFIENQVRFVDAIINGEIIIERKN 231
Query: 333 KKEMIAELIKRKYDSDPVKS 352
+ E+IA+L ++ +DS+P+K+
Sbjct: 232 RAEIIAQLAEKGFDSNPMKA 251
>gi|282599156|ref|YP_003359073.1| gp52 topoisomerase II medium subunit [Deftia phage phiW-14]
gi|257219226|gb|ACV50241.1| gp52 topoisomerase II medium subunit [Deftia phage phiW-14]
Length = 449
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 87 KAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKR-NDRREVKVAQLAG 145
K I+ ++ + + ++ DN+R+IP + DGLKP RK++ T ++ + EVKVA L
Sbjct: 2 KEISISQHIQGDHKAYATYDNQRNIPHIADGLKPSLRKIIHTAIETMRGKEEVKVAALGS 61
Query: 146 SVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
++ + Y HGE S++ ++ L +N+ G+NN+ LLQ GQFGT +
Sbjct: 62 RASDLTEYGHGEDSIIDAVVTLGRNYRGTNNLPLLQKQGQFGTMV 106
>gi|428175992|gb|EKX44879.1| hypothetical protein GUITHDRAFT_139486 [Guillardia theta CCMP2712]
Length = 1166
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 58/89 (65%)
Query: 100 ILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQS 159
IL+ + +++ + + +RKV++T +KR + +KV Q AG+V E +AYHHG+ +
Sbjct: 451 ILYKDQEDDEVVDKWFRKNRADARKVMYTAIKRKFKDPIKVVQFAGAVLETAAYHHGDAA 510
Query: 160 LMSTIINLAQNFVGSNNINLLQPIGQFGT 188
L II +A+ F GSNNINLL P GQFG+
Sbjct: 511 LQGAIIAMARRFCGSNNINLLHPDGQFGS 539
>gi|431809356|ref|YP_007236252.1| DNA topoisomerase [Salmonella phage SKML-39]
gi|408387495|gb|AFU64500.1| DNA topoisomerase [Salmonella phage SKML-39]
Length = 444
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 2/107 (1%)
Query: 84 KTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQL 143
KTT+ ++ T+F+N++ FS +++ R IP L D LKP RK+LF L+ N +E V +L
Sbjct: 2 KTTETLSVTDFINQDHKQFSVVNSIRQIPQLIDSLKPSQRKILFAALEYN--KEEIVDRL 59
Query: 144 AGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
A + Y G +++ TI+N+AQ F G+NNI GQFG+ +
Sbjct: 60 GMFAAARTNYKSGGENMSGTIVNMAQGFPGTNNIPYFDRDGQFGSIM 106
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 222 EYHTDTT---VKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
EY DTT V +L K D + ++FKL + + A+D GV+ ++
Sbjct: 261 EYANDTTEDGWDITVVFKRGELSKLSDDQVEQMFKLYSAVK-PVWTAWDEDGVIHRYAGW 319
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLR 327
+L F+ RL Y R+ Y+ + KLTN+A FI D+R
Sbjct: 320 QDMLLPFFNYRLARYEDRRQYMLKDMADRIHKLTNRALFIAWAVVTDMR 368
>gi|282599189|ref|YP_003358501.1| gp52 topoisomerase II medium subunit [Shigella phage phiSboM-AG3]
gi|226973495|gb|ACO94248.1| gp52 topoisomerase II medium subunit [Shigella phage phiSboM-AG3]
Length = 446
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 2/106 (1%)
Query: 85 TTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLA 144
K+IT T+FVN + FS +++ R IP L D LKP RK+LF L+ N +E V +L
Sbjct: 5 VAKSITVTDFVNTDHKQFSVVNSIRQIPQLIDSLKPSQRKILFAALEYN--KEEIVDRLG 62
Query: 145 GSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
A + Y G +++ TI+N+AQ F G+NNI GQFG+ +
Sbjct: 63 MFAAARTNYKSGGENMSGTIVNMAQGFPGTNNIPYFDRDGQFGSIM 108
>gi|418488644|ref|YP_007002653.1| topoisomerase II medium subunit [Escherichia phage PhaxI]
gi|312270883|gb|ADQ55849.1| topoisomerase II medium subunit [Escherichia phage PhaxI]
Length = 446
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 2/106 (1%)
Query: 85 TTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLA 144
K+IT TEF+N + FS +++ R IP L D LKP RK+LF L+ N +E V +L
Sbjct: 5 VAKSITVTEFINGDHKEFSVVNSIRQIPQLIDSLKPSQRKILFAALEYN--KEEIVDRLG 62
Query: 145 GSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
A + Y G +++ TI+N+AQ F G+NNI GQFG+ +
Sbjct: 63 MFAAARTNYKSGGENMSGTIVNMAQGFPGTNNIPYFDRDGQFGSIM 108
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 222 EYHTDTT---VKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
EY DTT V +L K + + ++F+L + A+D GV+ ++D
Sbjct: 263 EYANDTTEDGWDITVVFKRGELSKLNDEQVEQMFRLYSANK-PVWTAWDEDGVIHRYDGW 321
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLR 327
+L F+ RL Y R+ YL L + +L N+A FI D+R
Sbjct: 322 KDMLLPFFNYRLSRYEDRRQYLIKELTDKIHRLNNRAIFIGWAVITDMR 370
>gi|351518455|ref|YP_004895183.1| unnamed protein product [Salmonella phage SFP10]
gi|345451043|gb|AEN94107.1| DNA topoisomerase II medium subunit [Salmonella phage SFP10]
Length = 443
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 2/106 (1%)
Query: 85 TTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLA 144
K+IT T+FVN + FS +++ R IP L D LKP RK+LF L+ N +E V +L
Sbjct: 2 VAKSITVTDFVNTDHKEFSVVNSIRQIPQLIDSLKPSQRKILFAALEYN--KEEIVDRLG 59
Query: 145 GSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
A + Y G +++ TI+N+AQ F G+NNI GQFG+ +
Sbjct: 60 MFAAARTNYKSGGENMSGTIVNMAQGFPGTNNIPYFDRDGQFGSIM 105
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 222 EYHTDTT---VKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
EY DTT V +L K + + ++F+L + A+D GV+ ++D
Sbjct: 260 EYANDTTEDGWDITVVFKRGELSKLNDEQVEQMFRLYSANK-PVWTAWDEDGVIHRYDGW 318
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLR 327
+L F+ RL Y R+ YL L + +L N+A FI D+R
Sbjct: 319 KDMLLPFFNYRLSRYEDRRQYLIKELTDKIHRLNNRAIFIGWAVVTDMR 367
>gi|372199380|ref|YP_004957716.1| orf015 gene product [Escherichia phage vB_EcoM_CBA120]
gi|344055552|gb|AEM91748.1| gp52 topoisomerase II medium subunit [Escherichia phage
vB_EcoM_CBA120]
Length = 443
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 2/106 (1%)
Query: 85 TTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLA 144
K+IT T+FVN + FS +++ R IP L D LKP RK+LF L+ N +E V +L
Sbjct: 2 VAKSITVTDFVNTDHKEFSVVNSIRQIPQLIDSLKPSQRKILFAALEYN--KEEIVDRLG 59
Query: 145 GSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
A + Y G +++ TI+N+AQ F G+NNI GQFG+ +
Sbjct: 60 MFAAARTNYKSGGENMSGTIVNMAQGFPGTNNIPYFDRDGQFGSIM 105
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 215 FESNDYKEYHTDTT---VKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGV 271
++S EY DTT V +L K + + ++F+L + A+D GV
Sbjct: 253 YKSGILTEYANDTTEDGWDITVVFKRGELSKLNDEQVEQMFRLYSANK-PVWTAWDEDGV 311
Query: 272 LTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLR 327
+ ++D +L F+ RL Y R+ YL L + +L N+A FI D+R
Sbjct: 312 IHRYDGWKDMLLPFFNYRLSRYEDRRQYLIKELTDKIHRLNNRAIFIGWAVVTDMR 367
>gi|422937789|ref|YP_007007991.1| DNA topoisomerase II medium subunit [Salmonella phage PhiSH19]
gi|355398385|gb|AER70143.1| DNA topoisomerase II medium subunit [Salmonella phage PhiSH19]
Length = 470
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 2/106 (1%)
Query: 85 TTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLA 144
K+IT T+FVN + FS +++ R IP L D LKP RK+LF L+ N +E V +L
Sbjct: 29 VAKSITVTDFVNTDHKEFSVVNSIRQIPQLIDSLKPSQRKILFAALEYN--KEEIVDRLG 86
Query: 145 GSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
A + Y G +++ TI+N+AQ F G+NNI GQFG+ +
Sbjct: 87 MFAAARTNYKSGGENMSGTIVNMAQGFPGTNNIPYFDRDGQFGSIM 132
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 215 FESNDYKEYHTDTT---VKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGV 271
++S EY DTT V +L K + + ++F+L + A+D GV
Sbjct: 280 YKSGVLTEYANDTTEDGWDITVVFKRGELSKLNDEQVEQMFRLYSANK-PVWTAWDEDGV 338
Query: 272 LTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLR 327
+ ++D +L F+ RL Y R+ YL L + +L N+A FI D+R
Sbjct: 339 IHRYDGWKDMLLPFFNYRLSRYEDRRQYLIKELTDKIHRLNNRAIFIGWAVVTDMR 394
>gi|448259960|ref|YP_007237337.1| putative DNA topoisomerase/gyrase gp52 [Dickeya phage
vB_DsoM_LIMEstone1]
gi|384228612|emb|CCD57576.1| putative DNA topoisomerase/gyrase gp52 [Dickeya phage
vB_DsoM_LIMEstone1]
Length = 444
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Query: 84 KTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQL 143
KT + ++ T+F+N++ FS +++ R IP L D LKP RK+LF L+ N +E V +L
Sbjct: 2 KTIETLSVTDFINQDHKEFSVVNSIRQIPQLIDSLKPSQRKILFAALEYN--KEEIVDRL 59
Query: 144 AGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
A + Y G +++ TI+N+AQ F G+NNI GQFG+ +
Sbjct: 60 GMFAAARTNYKSGGENMSGTIVNMAQGFPGTNNIPYFDRDGQFGSIM 106
>gi|413923558|gb|AFW63490.1| hypothetical protein ZEAMMB73_491338 [Zea mays]
Length = 512
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 65/106 (61%)
Query: 246 DGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLG 305
+GL K FKL TT+ S+M FD G + K+DT QIL+EF +RLE+Y KRK+ L +
Sbjct: 7 EGLVKKFKLTTTIGTSNMHLFDSDGKIRKYDTPEQILEEFCHLRLEFYCKRKEALLKSIK 66
Query: 306 AEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKYDSDPVK 351
+ KL N+ RFI D ++ + NRK+ ++ EL ++ +D P K
Sbjct: 67 LDLKKLENKVRFIRCVVDNEIIVNNRKRADLFLELRQKNFDPFPKK 112
>gi|242095824|ref|XP_002438402.1| hypothetical protein SORBIDRAFT_10g016438 [Sorghum bicolor]
gi|241916625|gb|EER89769.1| hypothetical protein SORBIDRAFT_10g016438 [Sorghum bicolor]
Length = 396
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 62/96 (64%), Gaps = 4/96 (4%)
Query: 95 VNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYH 154
++++ ++ N +++++I + K RK N KVAQ A VAE SAYH
Sbjct: 259 IHQKYFVWVNEEDDKAIKTAFSKHKVEERKEWIYNFLHN----CKVAQFAAFVAECSAYH 314
Query: 155 HGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
HG+++L +TI+ +AQ+FVGSNNINLL+P GQFGT L
Sbjct: 315 HGKENLSNTIVRMAQDFVGSNNINLLRPNGQFGTRL 350
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 8 MIAGLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEE 67
++ GLGT T KE +YF +++ H+ F + + DD I+ AFSK V+ERK W+ ++
Sbjct: 238 LVKGLGTRTLKEGMQYFKDIDIHQKYFVWVNEEDDKAIKTAFSKHKVEERKEWIYNFLHN 297
Query: 68 CR 69
C+
Sbjct: 298 CK 299
>gi|68062299|ref|XP_673155.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56490797|emb|CAI02100.1| hypothetical protein PB300551.00.0 [Plasmodium berghei]
Length = 426
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 61/96 (63%), Gaps = 12/96 (12%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTST KE K+YFS+++ H+I+F ++GD D I MAFSKK +++RK WL ++
Sbjct: 343 GLGTSTDKEFKQYFSDIQSHKIVFLWTGDRDGDSIDMAFSKKRIEDRKLWLQNFI----- 397
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELILFSNMD 106
+G D+ K ++Y +FVNKELI +S D
Sbjct: 398 ---LGSYVDH----KEKDLSYYDFVNKELIYYSRYD 426
>gi|440789458|ref|YP_007349168.1| DNA topoisomerase II medium subunit [Serratia phage phiMAM1]
gi|425702497|gb|AFX93657.1| DNA topoisomerase II medium subunit [Serratia phage phiMAM1]
Length = 461
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 3/136 (2%)
Query: 89 ITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVA 148
++ T+FVN E FS +++ R IPS+ DGLKP RKVLF+ ++ +E V +LA A
Sbjct: 7 LSVTDFVNHEHKEFSVVNSIRQIPSIIDGLKPSQRKVLFSAIEYG--KEELVDRLAMFSA 64
Query: 149 EHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFLFIFESTNLSGAVVNALDF 208
+AY G +L ++N+A+ F G+NNI GQFG+ + E+ ++ V+
Sbjct: 65 ARTAYKSGGDNLSGVVVNMARGFQGTNNIPYFDRDGQFGSIVSK-EAASVRYISVSVSKV 123
Query: 209 GSGGWRFESNDYKEYH 224
S ++ E ND E++
Sbjct: 124 ISAIFKKEDNDILEHY 139
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 226 DTTVKF----VVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQI 281
D TV+F + +MSPD++ EM GL T S++ A+D G + + + ++I
Sbjct: 273 DITVQFKRGVLSSMSPDEIR--EMLGL-------VTRTSSTLVAWDENGYIRPYASVDEI 323
Query: 282 LKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFI 318
L +F+ RL Y R+ ++ + ++ +L FI
Sbjct: 324 LIDFFNYRLSRYEDRRQHMMASIRSKMAELDKMRMFI 360
>gi|408387315|gb|AFU64321.1| DNA topoisomerase [Salmonella phage STML-13-1]
Length = 443
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Query: 85 TTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLA 144
++I T++VN + FS ++ R IP L D LKP RK+LFT L+ +E V +L
Sbjct: 2 VAQSINVTDYVNNDHKAFSVFNSIRQIPQLIDSLKPSQRKILFTALEYG--KEEIVDRLG 59
Query: 145 GSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
A + Y G +++ +TI+N+AQ F G+NNI GQFG+ +
Sbjct: 60 MFAAARTNYKSGGENMGNTIVNMAQAFPGTNNIPYFDRDGQFGSIM 105
>gi|397133796|gb|AFO10305.1| DNA topoisomerase [Escherichia phage ECML-4]
Length = 443
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Query: 85 TTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLA 144
++I T++VN + FS ++ R IP L D LKP RK+LFT L+ +E V +L
Sbjct: 2 VAQSINVTDYVNNDHKAFSVFNSIRQIPQLIDSLKPSQRKILFTALEYG--KEEIVDRLG 59
Query: 145 GSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
A + Y G +++ +TI+N+AQ F G+NNI GQFG+ +
Sbjct: 60 MFAAARTNYKSGGENMGNTIVNMAQAFPGTNNIPYFDRDGQFGSIM 105
>gi|326804513|ref|YP_004327384.1| hypothetical protein Vi01_013 [Salmonella phage Vi01]
gi|301795163|emb|CBW37881.1| Topoisomerase IIM [Salmonella phage Vi01]
Length = 467
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Query: 85 TTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLA 144
++I T++VN + FS ++ R IP L D LKP RK+LFT L+ +E V +L
Sbjct: 26 VAQSINVTDYVNNDHKAFSVFNSIRQIPQLIDSLKPSQRKILFTALEYG--KEEIVDRLG 83
Query: 145 GSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
A + Y G +++ +TI+N+AQ F G+NNI GQFG+ +
Sbjct: 84 MFAAARTNYKSGGENMGNTIVNMAQAFPGTNNIPYFDRDGQFGSIM 129
>gi|297829358|ref|XP_002882561.1| hypothetical protein ARALYDRAFT_896968 [Arabidopsis lyrata subsp.
lyrata]
gi|297328401|gb|EFH58820.1| hypothetical protein ARALYDRAFT_896968 [Arabidopsis lyrata subsp.
lyrata]
Length = 178
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 68/110 (61%)
Query: 243 AEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEG 302
A +G K F L TT A S+M FD+ GV+ K+ T QIL+EF+ +RLEYY KRK+ +
Sbjct: 4 ARQEGFLKKFNLTTTSATSNMHLFDKEGVIKKYATPEQILEEFFDLRLEYYEKRKEIMLK 63
Query: 303 VLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKYDSDPVKS 352
L E LKL ++ +FI G++RI NRKK ++ +L +R + P K+
Sbjct: 64 NLELELLKLESKVKFIRGFLSGEIRIFNRKKADIAQDLRQRGFTPVPKKA 113
>gi|343959990|dbj|BAK63853.1| DNA topoisomerase 2-beta [Pan troglodytes]
Length = 566
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 44/57 (77%)
Query: 303 VLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKYDSDPVKSWKMKQNK 359
+LGAE+ KL NQARFI+EK G + IENR KK++I L++R Y+SDPVK+WK Q K
Sbjct: 1 MLGAESTKLNNQARFILEKIQGKITIENRSKKDLIQMLVQRGYESDPVKAWKEAQEK 57
>gi|321473636|gb|EFX84603.1| hypothetical protein DAPPUDRAFT_314876 [Daphnia pulex]
Length = 95
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 242 KAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLE 301
+A+ GLH+VFKLQ+T + SM D +G + +D+ + KEFY RL +Y KRK+Y
Sbjct: 6 RAKAGGLHQVFKLQSTYSQKSMMLLDSHGCVKTYDSIEETFKEFYDFRLGFYEKRKEYFT 65
Query: 302 GVLGAEALKLTNQARFI 318
G+L A + + NQARF+
Sbjct: 66 GLLQAISKMIENQARFL 82
>gi|448925659|gb|AGE49238.1| DNA topoisomerase II [Acanthocystis turfacea Chlorella virus
Br0604L]
Length = 355
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 35/170 (20%)
Query: 197 NLSGAVVNALDFGSGGWRFESNDYKEY----------------HTDTTV----KFVVTMS 236
++ G V + G W +NDYKE+ HT+ V FV T+
Sbjct: 144 DIKGKTVTVSELPVGTW---TNDYKEHLETLIEKKIVADFRERHTELNVHFEIDFVGTLD 200
Query: 237 PDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKR 296
P+ + KL++T+ ++M AFD G + K+D+ +I+ ++++ R E+Y KR
Sbjct: 201 PN------------ILKLESTIRTTNMHAFDPSGKIKKYDSPLEIITDWFSTRKEFYVKR 248
Query: 297 KDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAELIKRKYD 346
K+ L L A L N++ FI DG L I R + +++ +L K K+D
Sbjct: 249 KEDLLRDLKARVLVAQNKSSFISSVNDGSLVITRRAEDDVVKDLNKMKFD 298
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 21/24 (87%)
Query: 167 LAQNFVGSNNINLLQPIGQFGTFL 190
+AQ++VGSNNINLL P GQFG+ L
Sbjct: 1 MAQDYVGSNNINLLLPRGQFGSRL 24
>gi|374288012|ref|YP_005035097.1| putative DNA gyrase subunit A [Bacteriovorax marinus SJ]
gi|301166553|emb|CBW26129.1| putative DNA gyrase subunit A [Bacteriovorax marinus SJ]
Length = 480
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 7/109 (6%)
Query: 82 YTKTTKAITYTEFVNKEL---ILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREV 138
Y + ++I + V +E +++ MD R+IP L DGLKPG R++LFT K + +
Sbjct: 5 YLHSMESIPLEDIVREEYRTYQIYTLMD--RAIPYLKDGLKPGQRRILFTLWKNQSKGLM 62
Query: 139 KVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFG 187
KV+ G V + + HG S+ S I+N+AQ++ SNN L+ G FG
Sbjct: 63 KVSSATGLVL--TLHPHGPASVESAIVNMAQDYTFSNNYPLIDKKGYFG 109
>gi|356566100|ref|XP_003551273.1| PREDICTED: uncharacterized protein LOC100789999 [Glycine max]
Length = 492
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 17/135 (12%)
Query: 217 SNDYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFD 276
S+D+++ D TV V M +K+ +GL K FKL ++++ ++M FD G + K++
Sbjct: 71 SDDFRQNGDDATVNIEVRMKLEKIVGIMQEGLLKKFKLTSSISTNNMHLFDTEGKIKKYE 130
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
QIL+EF+ +RL+YY +RK F+ +G++ + N+KK ++
Sbjct: 131 NPEQILEEFFLLRLKYYERRK-----------------VSFVFGVVNGEMIVSNKKKADL 173
Query: 337 IAELIKRKYDSDPVK 351
+ EL ++ + P K
Sbjct: 174 MIELQQKGFTPMPRK 188
>gi|7579895|gb|AAB32916.2| type II topoisomerase [Cryptosporidium parvum]
Length = 45
Score = 65.5 bits (158), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/45 (71%), Positives = 37/45 (82%)
Query: 130 LKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGS 174
LK+ E+KVAQLAG VAEHSAYHHGE SL ST +N+AQNFVG+
Sbjct: 1 LKKRLNNELKVAQLAGYVAEHSAYHHGESSLQSTNVNMAQNFVGT 45
>gi|229891673|sp|P0C9C2.1|TOP2_ASFK5 RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
II
Length = 1192
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 108 ERSIPSLCDGLKPGSRKVL---FTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTI 164
ER IP+ DG+ RK+L C N+R E KV Q G VA+H YHHG+ SL ++I
Sbjct: 704 ERQIPNFLDGMTRARRKILAGGLKCFASNNR-ERKVFQFGGYVADHMFYHHGDMSLNTSI 762
Query: 165 INLAQNFVGSNNI-NLLQPIGQFGT 188
I AQ + GS+++ + IG FG+
Sbjct: 763 IKAAQYYPGSSHLYPVFIGIGSFGS 787
>gi|464905|sp|P34203.1|TOP2_ASFM2 RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
II
gi|58648|emb|CAA78614.1| DNA topoisomerase type II [African swine fever virus]
gi|450712|emb|CAA50820.1| DNA topoisomerase type II [African swine fever virus]
Length = 1191
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 108 ERSIPSLCDGLKPGSRKVL---FTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTI 164
ER IP+ DG+ RK+L C N+R E KV Q G VA+H YHHG+ SL ++I
Sbjct: 703 ERQIPNFLDGMTRARRKILAGGLKCFASNNR-ERKVFQFGGYVADHMFYHHGDMSLNTSI 761
Query: 165 INLAQNFVGSNNI-NLLQPIGQFGT 188
I AQ + GS+++ + IG FG+
Sbjct: 762 IKAAQYYPGSSHLYPVFIGIGSFGS 786
>gi|262135|gb|AAB24598.1| type II DNA topoisomerase homolog [African swine fever virus ASFV,
Malawi LIL20/1, Peptide, 1191 aa]
Length = 1191
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 108 ERSIPSLCDGLKPGSRKVL---FTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTI 164
ER IP+ DG+ RK+L C N+R E KV Q G VA+H YHHG+ SL ++I
Sbjct: 703 ERQIPNFLDGMTRARRKILAGGLKCFASNNR-ERKVFQFGGYVADHMFYHHGDMSLNTSI 761
Query: 165 INLAQNFVGSNNI-NLLQPIGQFGT 188
I AQ + GS+++ + IG FG+
Sbjct: 762 IKAAQYYPGSSHLYPVFIGIGSFGS 786
>gi|9628219|ref|NP_042805.1| topoisomerase II [African swine fever virus]
gi|267149|sp|Q00942.1|TOP2_ASFB7 RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
II
gi|210654|gb|AAA42735.1| topoisomerase II [African swine fever virus]
gi|780481|gb|AAA65341.1| topoisomerase II [African swine fever virus]
gi|162849494|emb|CAN10461.1| Topoisomerase II [African swine fever virus OURT 88/3]
gi|1097503|prf||2113434DU topoisomerase II
Length = 1192
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 108 ERSIPSLCDGLKPGSRKVL---FTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTI 164
ER IP+ DG+ RK+L C N+R E KV Q G VA+H YHHG+ SL ++I
Sbjct: 704 ERQIPNFLDGMTRARRKILAGGVKCFASNNR-ERKVFQFGGYVADHMFYHHGDMSLNTSI 762
Query: 165 INLAQNFVGSNNI-NLLQPIGQFGT 188
I AQ + GS+++ + IG FG+
Sbjct: 763 IKAAQYYPGSSHLYPVFIGIGSFGS 787
>gi|162849321|emb|CAN10212.1| Topoisomerase II [African swine fever virus Benin 97/1]
Length = 1192
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 108 ERSIPSLCDGLKPGSRKVL---FTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTI 164
ER IP+ DG+ RK+L C N+R E KV Q G VA+H YHHG+ SL ++I
Sbjct: 704 ERQIPNFLDGMTRARRKILAGGVKCFASNNR-ERKVFQFGGYVADHMFYHHGDMSLNTSI 762
Query: 165 INLAQNFVGSNNI-NLLQPIGQFGT 188
I AQ + GS+++ + IG FG+
Sbjct: 763 IKAAQYYPGSSHLYPVFIGIGSFGS 787
>gi|291289555|emb|CBH29212.1| BA71V-P1192R (i7R) [African swine fever virus E75]
Length = 1145
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 108 ERSIPSLCDGLKPGSRKVL---FTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTI 164
ER IP+ DG+ RK+L C N+R E KV Q G VA+H YHHG+ SL ++I
Sbjct: 704 ERQIPNFLDGMTRARRKILAGGVKCFASNNR-ERKVFQFGGYVADHMFYHHGDMSLNTSI 762
Query: 165 INLAQNFVGSNNI-NLLQPIGQFGT 188
I AQ + GS+++ + IG FG+
Sbjct: 763 IKAAQYYPGSSHLYPVFIGIGSFGS 787
>gi|303398797|emb|CBW46778.1| P1192R [African swine fever virus Georgia 2007/1]
Length = 1192
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 108 ERSIPSLCDGLKPGSRKVL---FTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTI 164
ER IP+ DG+ RK+L C N+R E KV Q G VA+H YHHG+ SL ++I
Sbjct: 704 ERQIPNFLDGMTRARRKILAGGVKCFASNNR-ERKVFQFGGYVADHMFYHHGDMSLNTSI 762
Query: 165 INLAQNFVGSNNI-NLLQPIGQFGT 188
I AQ + GS+++ + IG FG+
Sbjct: 763 IKAAQYYPGSSHLYPVFIGIGSFGS 787
>gi|229891674|sp|P0C9C0.1|TOP2_ASFP4 RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
II
Length = 1192
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 108 ERSIPSLCDGLKPGSRKVL---FTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTI 164
ER IP+ DG+ RK+L C N+R E KV Q G VA+H YHHG+ SL ++I
Sbjct: 704 ERQIPNFLDGMTRARRKILAGGVKCFASNNR-ERKVFQFGGYVADHMFYHHGDMSLNTSI 762
Query: 165 INLAQNFVGSNNI-NLLQPIGQFGT 188
I AQ + GS+++ + IG FG+
Sbjct: 763 IKAAQYYPGSSHLYPVFIGIGSFGS 787
>gi|229891675|sp|P0C9C1.1|TOP2_ASFWA RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
II
Length = 1192
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 108 ERSIPSLCDGLKPGSRKVL---FTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTI 164
ER IP+ DG+ RK+L C N+R E KV Q G VA+H YHHG+ SL ++I
Sbjct: 704 ERQIPNFLDGMTRARRKILAGGVKCFASNNR-ERKVFQFGGYVADHMFYHHGDMSLNTSI 762
Query: 165 INLAQNFVGSNNI-NLLQPIGQFGT 188
I AQ + GS+++ + IG FG+
Sbjct: 763 IKAAQYYPGSSHLYPVFIGIGSFGS 787
>gi|297809489|ref|XP_002872628.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318465|gb|EFH48887.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 117
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 42/59 (71%), Gaps = 5/59 (8%)
Query: 132 RNDRRE---VKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFG 187
R R+E V+V + G EH+A+HH EQ L TII +AQNFVG+NN+N+L+PIG FG
Sbjct: 7 RERRKENWYVRVKKNVG--LEHTAHHHCEQILSRTIIRMAQNFVGNNNVNMLRPIGVFG 63
>gi|389738634|gb|EIM79831.1| hypothetical protein STEHIDRAFT_116303 [Stereum hirsutum FP-91666
SS1]
Length = 690
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 77/165 (46%), Gaps = 34/165 (20%)
Query: 89 ITYTEFVNKELILFSNMDNERSIPSLCDGL----------------KPGSRKVLFTCLKR 132
I+ ++ V ELILF +DN R IP + + + +P SR+ F
Sbjct: 407 ISISDIVMNELILFLYVDNVRFIPRVANVMSLARGRSSKVASGVRGEPKSRQYSFISFPV 466
Query: 133 NDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFLFI 192
+ ++AQL G + EH+ +HGEQSL TI+NL Q++VG N+NL P + +F
Sbjct: 467 H-----QLAQL-GYIFEHATCYHGEQSLTRTIVNLTQDYVGVTNLNLFMPSAE---VIFE 517
Query: 193 FESTNLSGAVVNALDFGSG-----GWRFESNDYKEYHTDTTVKFV 232
E +S V D G G W +D +E T+ F+
Sbjct: 518 QEIGVVSKGDVGEWDVGMGLQAACAW----DDQQELPAKCTLHFL 558
>gi|435844548|ref|YP_007006652.1| gp45 [Sphingomonas phage PAU]
gi|380885858|gb|AFF28043.1| gp45 [Sphingomonas phage PAU]
Length = 496
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRR--EVKVAQLAGSVAEHSAYHHGEQSLMSTII 165
+R++PSL DG K G+RK+L L + ++ +VK L G V S Y HG+ SL ST++
Sbjct: 48 KRAVPSLIDGFKTGARKILHAALNGSAKKGSDVKCLNLVGDVYSLSGYDHGDSSLYSTML 107
Query: 166 NLAQNFVGSNNINLLQPIGQFGTF 189
L+ +F S+N+ L GQ GT
Sbjct: 108 TLSSDF--SDNLAPLFIKGQGGTL 129
>gi|312262749|gb|ADQ53044.1| gp52 topoisomerase II medium subunit [Aeromonas phage PX29]
Length = 438
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINL 167
ER++PS+ DGLKP R +L++ LK R K A +AG ++E+ Y+HGE + M +
Sbjct: 26 ERALPSVVDGLKPAQRYILYSVLKNAGREFKKNAAIAGVISEY-GYNHGETAAMDAACLM 84
Query: 168 AQNFVGSNNINLLQPIGQFGT 188
A + +NN ++Q G FG+
Sbjct: 85 ASTW--NNNFPVIQGRGNFGS 103
>gi|38640269|ref|NP_944225.1| gp52 topoisomerase II medium subunit [Aeromonas phage Aeh1]
gi|33414954|gb|AAQ17997.1| gp52 topoisomerase II medium subunit [Aeromonas phage Aeh1]
Length = 438
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINL 167
ER++PS+ DGLKP R +LF+ LK R K A +AG ++E+ Y+HGE + M +
Sbjct: 26 ERALPSMVDGLKPVQRYILFSVLKNAGREFKKNAAVAGVISEY-GYNHGEMAAMDAACLM 84
Query: 168 AQNFVGSNNINLLQPIGQFG 187
A + +NN ++Q G FG
Sbjct: 85 ASTW--NNNFPVIQGRGNFG 102
>gi|37651722|ref|NP_932596.1| gp52 [Aeromonas phage 44RR2.8t]
gi|34733022|gb|AAQ81559.1| topoisomerase II medium subunit [Aeromonas phage 44RR2.8t]
Length = 555
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
Query: 94 FVNKELILFSNMD-NERSIPSLCDGLKPGSRKVLFTCL---KRNDRREVKVAQLAGSVAE 149
+N E + F+ ER+IPSL DGLKP R ++ L K+N + KVA LAG V+E
Sbjct: 118 IINHEALEFAMYTVEERAIPSLIDGLKPVQRFFMYRALEYAKQNRSKFNKVAALAGGVSE 177
Query: 150 HSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+ YHHGE S +A + +NNI +L+ G FG+
Sbjct: 178 -AGYHHGEGSAAGAGQLIANTW--NNNIPILEGDGNFGS 213
>gi|66392041|ref|YP_238966.1| gp52 [Aeromonas phage 31]
gi|62114878|gb|AAX63726.1| gp52 [Aeromonas phage 31]
Length = 554
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
Query: 94 FVNKELILFSNMD-NERSIPSLCDGLKPGSRKVLFTCL---KRNDRREVKVAQLAGSVAE 149
+N E + F+ ER+IPSL DGLKP R ++ L K+N + KVA LAG V+E
Sbjct: 118 IINHEALEFAMYTVEERAIPSLIDGLKPVQRFFMYRALEYAKQNRSKFNKVAALAGGVSE 177
Query: 150 HSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
+ YHHGE S +A + +NNI +L+ G FG+
Sbjct: 178 -AGYHHGEGSAAGAGQLIANTW--NNNIPILEGDGNFGS 213
>gi|401825025|gb|AFQ22715.1| DNA topoisomerase [Stenotrophomonas phage IME13]
Length = 452
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 94 FVNKELILFSNMD-NERSIPSLCDGLKPGSRKVLFTCL---KRNDRREVKVAQLAGSVAE 149
+N E + F+ ER+IPS+ DG KP R ++ L K+N + KVA LAG V+E
Sbjct: 16 IINNEALEFAMYTVEERAIPSIIDGFKPVQRFFMYRALEYAKQNKTKFNKVAALAGGVSE 75
Query: 150 HSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+ YHHGE S S +A + +NNI +L+ G FG+ L
Sbjct: 76 -AGYHHGEGSAASAGQLIANTW--NNNIPVLEGDGNFGSRL 113
>gi|395653309|gb|AFN69864.1| DNA topoisomerase II medium subunit [Aeromonas phage Aes012]
Length = 544
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 94 FVNKELILFSNMD-NERSIPSLCDGLKPGSRKVLFTCL---KRNDRREVKVAQLAGSVAE 149
+N E + F+ ER+IPS+ DG KP R ++ L K+N + KVA LAG V+E
Sbjct: 108 IINNEALEFAMYTVEERAIPSIIDGFKPVQRFFMYRALEYAKQNKTKFNKVAALAGGVSE 167
Query: 150 HSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+ YHHGE S S +A + +NNI +L+ G FG+ L
Sbjct: 168 -AGYHHGEGSAASAGQLIANTW--NNNIPVLEGDGNFGSRL 205
>gi|260941161|ref|XP_002614747.1| hypothetical protein CLUG_05525 [Clavispora lusitaniae ATCC 42720]
gi|238851933|gb|EEQ41397.1| hypothetical protein CLUG_05525 [Clavispora lusitaniae ATCC 42720]
Length = 760
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTSTS +A EYFS +++H F ++ I +AFSKK D+RK WL
Sbjct: 646 GLGTSTSVDAVEYFSKLDKHLKEFHALESDEPPLIELAFSKKKADDRKEWL--------- 696
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKELIL-FSNMDNERSIPSLCDGLKPGSRKVLFTC 129
G K I F+N+ELIL F + +G +PG +K
Sbjct: 697 ---QGFQPGTFLDSDMKVIPIKNFINEELILVFHGWIISDPFLHVWNGFQPGPKKSHVWL 753
Query: 130 LKRN 133
++N
Sbjct: 754 FQKN 757
>gi|423262315|ref|YP_007010914.1| DNA topoisomerase subunit [Aeromonas phage Aes508]
gi|402762193|gb|AFQ97307.1| DNA topoisomerase subunit [Aeromonas phage Aes508]
Length = 544
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 94 FVNKELILFSNMD-NERSIPSLCDGLKPGSRKVLFTCL---KRNDRREVKVAQLAGSVAE 149
+N E + F+ ER+IPS+ DG KP R ++ L K+N + KVA LAG V+E
Sbjct: 108 IINNEALEFAMYTVEERAIPSIIDGFKPVQRFFMYRALEYAKQNKTKFNKVAALAGGVSE 167
Query: 150 HSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+ YHHGE S S +A + +NNI +L+ G FG+ L
Sbjct: 168 -AGYHHGEGSAASAGQLIANTW--NNNIPVLEGDGNFGSRL 205
>gi|310722215|ref|YP_003969039.1| unnamed protein product [Aeromonas phage phiAS4]
gi|306021058|gb|ADM79593.1| DNA topoisomerase subunit [Aeromonas phage phiAS4]
Length = 547
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 94 FVNKELILFSNMD-NERSIPSLCDGLKPGSRKVLFTCL---KRNDRREVKVAQLAGSVAE 149
+N E + F+ ER+IPS+ DG KP R ++ L K+N + KVA LAG V+E
Sbjct: 111 IINNEALEFAMYTVEERAIPSIIDGFKPVQRFFMYRALEYAKQNKTKFNKVAALAGGVSE 170
Query: 150 HSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+ YHHGE S S +A + +NNI +L+ G FG+ L
Sbjct: 171 -AGYHHGEGSAASAGQLIANTW--NNNIPVLEGDGNFGSRL 208
>gi|310722590|ref|YP_003969413.1| unnamed protein product [Aeromonas phage phiAS5]
gi|306021433|gb|ADM79967.1| topoisomerase II medium subunit [Aeromonas phage phiAS5]
Length = 438
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINL 167
ER++PS+ DGLKP R +L++ LK + K A +AG ++E+ Y+HGE + M +
Sbjct: 26 ERALPSMVDGLKPVQRYILYSVLKNAGKSFKKNAAIAGVISEY-GYNHGEVAAMDAACLM 84
Query: 168 AQNFVGSNNINLLQPIGQFGT 188
A + +NN ++Q G FG+
Sbjct: 85 ASTW--NNNFPIIQGQGNFGS 103
>gi|384109285|ref|ZP_10010165.1| Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A
subunit [Treponema sp. JC4]
gi|383869162|gb|EID84781.1| Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A
subunit [Treponema sp. JC4]
Length = 646
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 10/84 (11%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTIIN 166
+R+IP + DGLKP R++L T LK +D R KVA + G V AYH HG+ S+ + ++N
Sbjct: 22 DRAIPEITDGLKPVQRRILHTLLKTDDGRFTKVANVVGKVM---AYHPHGDASIYTALVN 78
Query: 167 LAQNFVGSNNINLLQPIGQFGTFL 190
LA N + G FG L
Sbjct: 79 LA------NKELFIDKQGNFGNML 96
>gi|294338122|emb|CBJ93960.1| Possible DNA topoisomerase (medium subunit) [Campylobacter phage
CP220]
Length = 442
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 94 FVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAY 153
F+N EL +S R I S DGLK SRK++ T L + E KV+ V ++ Y
Sbjct: 10 FLN-ELTNYSCYSTLRMIASSIDGLKNSSRKIINTALDKKLNTETKVSIFDNMVQSYTQY 68
Query: 154 HHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
HG S I N+A ++ GSNNI LL+ G FG+
Sbjct: 69 LHG--SCAGVIQNMAASYTGSNNIPLLEGKGNFGS 101
>gi|294338321|emb|CBJ94360.1| Possible DNA topoisomerase (medium subunit) [Campylobacter phage
CPt10]
Length = 442
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 94 FVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAY 153
F+N EL +S R I S DGLK SRK++ T L + E KV+ V ++ Y
Sbjct: 10 FLN-ELTNYSCYSTLRMIASSIDGLKNSSRKIINTALDKKLNTETKVSIFDNMVQSYTQY 68
Query: 154 HHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
HG S I N+A ++ GSNNI LL+ G FG+
Sbjct: 69 LHG--SCSGVIQNMAASYTGSNNIPLLEGKGNFGS 101
>gi|333494604|gb|AEF56840.1| gp52 DNA topoisomerase II [Campylobacter phage vB_CcoM-IBB_35]
Length = 442
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 94 FVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAY 153
F+N EL +S R I S DGLK SRK++ T L + E KV+ V ++ Y
Sbjct: 10 FLN-ELTNYSCYSTLRMIASSIDGLKNSSRKIINTALDKKLNTETKVSIFDNMVQSYTQY 68
Query: 154 HHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
HG S I N+A ++ GSNNI LL+ G FG+
Sbjct: 69 LHG--SCSGVIQNMAASYTGSNNIPLLEGKGNFGS 101
>gi|183987586|gb|ACC65783.1| topoisomerase II [Pleurotus nebrodensis]
Length = 534
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 12/88 (13%)
Query: 11 GLGTSTSKEAKEYFSNMERHRILFKYSGDNDDAHIRMAFSKKLVDERKTWLTTWMEECRR 70
GLGTS+ +A+EYFS M +H I F D + I +AFSKK D+RK WL R
Sbjct: 459 GLGTSSDADAREYFSQMGKHMIPFATMEDEERGLIDLAFSKKKADDRKEWL--------R 510
Query: 71 RKEMGIGEDYLYTKTTKAITYTEFVNKE 98
+ + G D+ I +T+F+NKE
Sbjct: 511 QFKPGTYLDH----NIDEIPFTDFINKE 534
>gi|395653403|gb|AFN69948.1| DNA topoisomerase subunit [Aeromonas phage Aes516]
Length = 545
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 7/101 (6%)
Query: 94 FVNKELILFSNMD-NERSIPSLCDGLKPGSRKVLFTCL---KRNDRREVKVAQLAGSVAE 149
+N E + F+ ER+IPS+ DG KP R ++ L K+N + KVA LAG V+E
Sbjct: 108 IINNEALEFAMYTVEERAIPSIIDGFKPVQRFFMYRALEYAKQNKTKFNKVAALAGGVSE 167
Query: 150 HSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+ YHHGE S +A + +NNI +L+ G FG+ L
Sbjct: 168 -AGYHHGEGSAAGAGQLIANTW--NNNIPVLEGDGNFGSRL 205
>gi|109290217|ref|YP_656466.1| gp52 DNA topoisomerase subunit [Aeromonas phage 25]
gi|104345890|gb|ABF72790.1| gp52 DNA topoisomerase subunit [Aeromonas phage 25]
Length = 544
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 7/101 (6%)
Query: 94 FVNKELILFSNMD-NERSIPSLCDGLKPGSRKVLFTCL---KRNDRREVKVAQLAGSVAE 149
+N E + F+ ER+IPS+ DG KP R ++ L K+N + KVA LAG V+E
Sbjct: 108 IINNEALEFAMYTVEERAIPSIIDGFKPVQRFFMYRALEYAKQNKTKFNKVAALAGGVSE 167
Query: 150 HSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
+ YHHGE S +A + +NNI +L+ G FG+ L
Sbjct: 168 -AGYHHGEGSAAGAGQLIANTW--NNNIPVLEGDGNFGSRL 205
>gi|397581929|gb|EJK52099.1| hypothetical protein THAOC_28667 [Thalassiosira oceanica]
Length = 390
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 280 QILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIAE 339
+IL+ F+ R+ YY RK +L +G E L N+ARF+ E C+ DL + NRK+K+++
Sbjct: 2 EILRTFFTNRMVYYVARKGFLLDRIGRELSILKNKARFVEEVCNEDLVVSNRKRKDLLHA 61
Query: 340 LIKRKYDSDP 349
L +R YD P
Sbjct: 62 LKERGYDLHP 71
>gi|422935311|ref|YP_007005268.1| putative DNA topoisomerase [Campylobacter phage CP21]
gi|399498319|emb|CCH63660.1| putative DNA topoisomerase [Campylobacter phage CP21]
Length = 257
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 94 FVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAY 153
F+N EL +S R I S DGLK SRK++ T L + E KV+ V ++ Y
Sbjct: 10 FLN-ELTNYSCYSTLRMIASSIDGLKNSSRKIINTALDKKLNTETKVSIFDNMVQSYTQY 68
Query: 154 HHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
HG S I N+A ++ GSNNI LL+ G FG+
Sbjct: 69 LHGSCS--GVIQNMAASYTGSNNIPLLEGKGNFGS 101
>gi|410939821|ref|ZP_11371646.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira noguchii str.
2006001870]
gi|410785018|gb|EKR73984.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira noguchii str.
2006001870]
Length = 462
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLKRNDR-REVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
+ R+IP DGLKP R++L+ + R R K ++AG YH HG++S+ +
Sbjct: 35 DSRAIPHEIDGLKPVQRRILWAMWNSDARNRYTKTVKVAGLAM---GYHPHGDKSIQDAL 91
Query: 165 INLAQNFVGSNNINLLQPIGQFGTFL 190
+AQ+F +NNI L+ G FG L
Sbjct: 92 SQMAQDFTFANNIPLVSGEGTFGDVL 117
>gi|418694571|ref|ZP_13255607.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira kirschneri str.
H1]
gi|421109285|ref|ZP_15569807.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira kirschneri str.
H2]
gi|409957641|gb|EKO16546.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira kirschneri str.
H1]
gi|410005587|gb|EKO59376.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira kirschneri str.
H2]
Length = 462
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLKRNDR-REVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
+ R+IP DGLKP R++L+ + R R K ++AG YH HG++S+ +
Sbjct: 35 DSRAIPHEIDGLKPVQRRILWAMWNSDARNRYTKTVKVAGLAM---GYHPHGDKSIQDAL 91
Query: 165 INLAQNFVGSNNINLLQPIGQFGTFL 190
+AQ+F +NNI L+ G FG L
Sbjct: 92 SQMAQDFTFANNIPLVSGEGTFGDVL 117
>gi|398335348|ref|ZP_10520053.1| DNA topoisomerase subunit A [Leptospira kmetyi serovar Malaysia
str. Bejo-Iso9]
Length = 462
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 11/89 (12%)
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLKRNDR----REVKVAQLAGSVAEHSAYH-HGEQSLM 161
+ R+IP DGLKP R++L+ + R + VKVA LA YH HG++S+
Sbjct: 35 DSRAIPHEIDGLKPVQRRILWAMWNSDARNRYTKTVKVAGLA------MGYHPHGDKSIQ 88
Query: 162 STIINLAQNFVGSNNINLLQPIGQFGTFL 190
+ +AQ+F +NNI L+ G FG L
Sbjct: 89 DALSQMAQDFTFANNIPLVSGEGTFGDVL 117
>gi|398340514|ref|ZP_10525217.1| DNA gyrase subunit A [Leptospira kirschneri serovar Bim str. 1051]
gi|418676564|ref|ZP_13237843.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|418686426|ref|ZP_13247593.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|418741088|ref|ZP_13297464.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
gi|421092288|ref|ZP_15553042.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira kirschneri str.
200802841]
gi|421132174|ref|ZP_15592345.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira kirschneri str.
2008720114]
gi|400323190|gb|EJO71045.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|409998934|gb|EKO49636.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira kirschneri str.
200802841]
gi|410356322|gb|EKP03662.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira kirschneri str.
2008720114]
gi|410739040|gb|EKQ83771.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|410751683|gb|EKR08660.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
Length = 462
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLKRNDR-REVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
+ R+IP DGLKP R++L+ + R R K ++AG YH HG++S+ +
Sbjct: 35 DSRAIPHEIDGLKPVQRRILWAMWNSDARNRYTKTVKVAGLAM---GYHPHGDKSIQDAL 91
Query: 165 INLAQNFVGSNNINLLQPIGQFGTFL 190
+AQ+F +NNI L+ G FG L
Sbjct: 92 SQMAQDFTFANNIPLVSGEGTFGDVL 117
>gi|418717987|ref|ZP_13277524.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira borgpetersenii
str. UI 09149]
gi|418737132|ref|ZP_13293530.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|410744980|gb|EKQ93712.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira borgpetersenii
str. UI 09149]
gi|410747291|gb|EKR00197.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
Length = 462
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLKRNDR-REVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
+ R+IP DGLKP R++L+ + R R K ++AG YH HG++S+ +
Sbjct: 35 DSRAIPHEIDGLKPVQRRILWAMWNSDARNRYTKTVKVAGLAM---GYHPHGDKSIQDAL 91
Query: 165 INLAQNFVGSNNINLLQPIGQFGTFL 190
+AQ+F +NNI L+ G FG L
Sbjct: 92 SQMAQDFTFANNIPLVSGEGTFGDVL 117
>gi|24216892|ref|NP_714373.1| DNA gyrase subunit A [Leptospira interrogans serovar Lai str.
56601]
gi|45659166|ref|YP_003252.1| DNA gyrase subunit A [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|386075771|ref|YP_005990091.1| DNA gyrase subunit A [Leptospira interrogans serovar Lai str. IPAV]
gi|417762116|ref|ZP_12410109.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans str.
2002000624]
gi|417766040|ref|ZP_12413995.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|417774349|ref|ZP_12422216.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans str.
2002000621]
gi|417784696|ref|ZP_12432401.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans str.
C10069]
gi|418669773|ref|ZP_13231147.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|418670973|ref|ZP_13232332.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans str.
2002000623]
gi|418688996|ref|ZP_13250122.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans str.
FPW2026]
gi|418701134|ref|ZP_13262064.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Bataviae str. L1111]
gi|418710046|ref|ZP_13270829.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|418724564|ref|ZP_13283373.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans str.
UI 12621]
gi|418728487|ref|ZP_13287059.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans str.
UI 12758]
gi|421085260|ref|ZP_15546114.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira santarosai str.
HAI1594]
gi|421105185|ref|ZP_15565775.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|421120314|ref|ZP_15580626.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans str.
Brem 329]
gi|421125572|ref|ZP_15585823.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|421136132|ref|ZP_15596240.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|24198273|gb|AAN51391.1|AE011572_13 DNA gyrase subunit A [Leptospira interrogans serovar Lai str.
56601]
gi|45602412|gb|AAS71889.1| DNA gyrase subunit A [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|353459563|gb|AER04108.1| DNA gyrase subunit A [Leptospira interrogans serovar Lai str. IPAV]
gi|400351713|gb|EJP03929.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|400361686|gb|EJP17648.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans str.
FPW2026]
gi|409941905|gb|EKN87529.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans str.
2002000624]
gi|409951485|gb|EKO05999.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans str.
C10069]
gi|409961885|gb|EKO25627.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans str.
UI 12621]
gi|410019547|gb|EKO86364.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|410346804|gb|EKO97747.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans str.
Brem 329]
gi|410364959|gb|EKP20357.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|410432209|gb|EKP76566.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira santarosai str.
HAI1594]
gi|410436957|gb|EKP86062.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|410575952|gb|EKQ38967.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans str.
2002000621]
gi|410582036|gb|EKQ49838.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans str.
2002000623]
gi|410754063|gb|EKR15718.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|410759781|gb|EKR25988.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Bataviae str. L1111]
gi|410769672|gb|EKR44902.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|410776780|gb|EKR56756.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans str.
UI 12758]
gi|455792250|gb|EMF44019.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Lora str. TE 1992]
gi|456823879|gb|EMF72316.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Canicola str. LT1962]
gi|456968074|gb|EMG09331.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Grippotyphosa str. LT2186]
gi|456984853|gb|EMG20814.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Copenhageni str. LT2050]
Length = 462
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLKRNDR-REVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
+ R+IP DGLKP R++L+ + R R K ++AG YH HG++S+ +
Sbjct: 35 DSRAIPHEIDGLKPVQRRILWAMWNSDARNRYTKTVKVAGLAM---GYHPHGDKSIQDAL 91
Query: 165 INLAQNFVGSNNINLLQPIGQFGTFL 190
+AQ+F +NNI L+ G FG L
Sbjct: 92 SQMAQDFTFANNIPLVSGEGTFGDVL 117
>gi|421095189|ref|ZP_15555902.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira borgpetersenii
str. 200801926]
gi|410361899|gb|EKP12939.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira borgpetersenii
str. 200801926]
Length = 462
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLKRNDR-REVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
+ R+IP DGLKP R++L+ + R R K ++AG YH HG++S+ +
Sbjct: 35 DSRAIPHEIDGLKPVQRRILWAMWNSDARNRYTKTVKVAGLAM---GYHPHGDKSIQDAL 91
Query: 165 INLAQNFVGSNNINLLQPIGQFGTFL 190
+AQ+F +NNI L+ G FG L
Sbjct: 92 SQMAQDFTFANNIPLVSGEGTFGDVL 117
>gi|398331855|ref|ZP_10516560.1| DNA topoisomerase subunit A [Leptospira alexanderi serovar Manhao 3
str. L 60]
Length = 462
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLKRNDR-REVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
+ R+IP DGLKP R++L+ + R R K ++AG YH HG++S+ +
Sbjct: 35 DSRAIPHEIDGLKPVQRRILWAMWNSDARNRYTKTVKVAGLAM---GYHPHGDKSIQDAL 91
Query: 165 INLAQNFVGSNNINLLQPIGQFGTFL 190
+AQ+F +NNI L+ G FG L
Sbjct: 92 SQMAQDFTFANNIPLVSGEGTFGDVL 117
>gi|417770301|ref|ZP_12418211.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Pomona str. Pomona]
gi|418681805|ref|ZP_13243028.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|418705152|ref|ZP_13266017.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|418713322|ref|ZP_13274049.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans str.
UI 08452]
gi|421116878|ref|ZP_15577252.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|400326573|gb|EJO78839.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|409947855|gb|EKN97849.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Pomona str. Pomona]
gi|410011519|gb|EKO69636.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|410765003|gb|EKR35705.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|410790405|gb|EKR84099.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans str.
UI 08452]
gi|455668813|gb|EMF34000.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira interrogans
serovar Pomona str. Fox 32256]
Length = 462
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLKRNDR-REVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
+ R+IP DGLKP R++L+ + R R K ++AG YH HG++S+ +
Sbjct: 35 DSRAIPHEIDGLKPVQRRILWAMWNSDARNRYTKTVKVAGLAM---GYHPHGDKSIQDAL 91
Query: 165 INLAQNFVGSNNINLLQPIGQFGTFL 190
+AQ+F +NNI L+ G FG L
Sbjct: 92 SQMAQDFTFANNIPLVSGEGTFGDVL 117
>gi|456863147|gb|EMF81637.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira weilii serovar
Topaz str. LT2116]
Length = 462
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 11/89 (12%)
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLKRNDR----REVKVAQLAGSVAEHSAYH-HGEQSLM 161
+ R+IP DGLKP R++L+ + R + VKVA LA YH HG++S+
Sbjct: 35 DSRAIPHEIDGLKPVQRRILWAMWNSDARNRYTKTVKVAGLA------MGYHPHGDKSIQ 88
Query: 162 STIINLAQNFVGSNNINLLQPIGQFGTFL 190
+ +AQ+F +NNI L+ G FG L
Sbjct: 89 DALSQMAQDFTFANNIPLVSGEGTFGDVL 117
>gi|359728847|ref|ZP_09267543.1| DNA topoisomerase (ATP-hydrolyzing), subunit A [Leptospira weilii
str. 2006001855]
gi|417778720|ref|ZP_12426521.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira weilii str.
2006001853]
gi|410781139|gb|EKR65717.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira weilii str.
2006001853]
Length = 462
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLKRNDR-REVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
+ R+IP DGLKP R++L+ + R R K ++AG YH HG++S+ +
Sbjct: 35 DSRAIPHEIDGLKPVQRRILWAMWNSDARNRYTKTVKVAGLAM---GYHPHGDKSIQDAL 91
Query: 165 INLAQNFVGSNNINLLQPIGQFGTFL 190
+AQ+F +NNI L+ G FG L
Sbjct: 92 SQMAQDFTFANNIPLVSGEGTFGDVL 117
>gi|116327081|ref|YP_796801.1| DNA topoisomerase subunit A [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116332262|ref|YP_801980.1| DNA topoisomerase subunit A [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|116119825|gb|ABJ77868.1| DNA topoisomerase (ATP-hydrolyzing), subunit A [Leptospira
borgpetersenii serovar Hardjo-bovis str. L550]
gi|116125951|gb|ABJ77222.1| DNA topoisomerase (ATP-hydrolyzing), subunit A [Leptospira
borgpetersenii serovar Hardjo-bovis str. JB197]
Length = 462
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLKRNDR-REVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
+ R+IP DGLKP R++L+ + R R K ++AG YH HG++S+ +
Sbjct: 35 DSRAIPHEIDGLKPVQRRILWAMWNSDARNRYTKTVKVAGLAM---GYHPHGDKSIQDAL 91
Query: 165 INLAQNFVGSNNINLLQPIGQFGTFL 190
+AQ+F +NNI L+ G FG L
Sbjct: 92 SQMAQDFTFANNIPLVSGEGTFGDVL 117
>gi|421099293|ref|ZP_15559950.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira borgpetersenii
str. 200901122]
gi|410797725|gb|EKR99827.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira borgpetersenii
str. 200901122]
Length = 462
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLKRNDR-REVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
+ R+IP DGLKP R++L+ + R R K ++AG YH HG++S+ +
Sbjct: 35 DSRAIPHEIDGLKPVQRRILWAMWNSDARNRYTKTVKVAGLAM---GYHPHGDKSIQDAL 91
Query: 165 INLAQNFVGSNNINLLQPIGQFGTFL 190
+AQ+F +NNI L+ G FG L
Sbjct: 92 SQMAQDFTFANNIPLVSGEGTFGDVL 117
>gi|359684599|ref|ZP_09254600.1| DNA topoisomerase (ATP-hydrolyzing), subunit A [Leptospira
santarosai str. 2000030832]
gi|410451323|ref|ZP_11305338.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira sp. Fiocruz
LV3954]
gi|418743291|ref|ZP_13299655.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira santarosai str.
CBC379]
gi|418754676|ref|ZP_13310898.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira santarosai str.
MOR084]
gi|421113599|ref|ZP_15574041.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira santarosai str.
JET]
gi|422003443|ref|ZP_16350673.1| DNA topoisomerase (ATP-hydrolyzing), subunit A [Leptospira
santarosai serovar Shermani str. LT 821]
gi|409964777|gb|EKO32652.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira santarosai str.
MOR084]
gi|410014824|gb|EKO76941.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira sp. Fiocruz
LV3954]
gi|410795845|gb|EKR93737.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira santarosai str.
CBC379]
gi|410801044|gb|EKS07220.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira santarosai str.
JET]
gi|417257927|gb|EKT87322.1| DNA topoisomerase (ATP-hydrolyzing), subunit A [Leptospira
santarosai serovar Shermani str. LT 821]
gi|456877676|gb|EMF92691.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira santarosai str.
ST188]
Length = 462
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLKRNDR-REVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
+ R+IP DGLKP R++L+ + R R K ++AG YH HG++S+ +
Sbjct: 35 DSRAIPHEIDGLKPVQRRILWAMWNSDARNRYTKTVKVAGLAM---GYHPHGDKSIQDAL 91
Query: 165 INLAQNFVGSNNINLLQPIGQFGTFL 190
+AQ+F +NNI L+ G FG L
Sbjct: 92 SQMAQDFTFANNIPLVSGEGTFGDVL 117
>gi|456887155|gb|EMF98217.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira borgpetersenii
str. 200701203]
Length = 367
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 11/89 (12%)
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLKRNDR----REVKVAQLAGSVAEHSAYH-HGEQSLM 161
+ R+IP DGLKP R++L+ + R + VKVA LA YH HG++S+
Sbjct: 35 DSRAIPHEIDGLKPVQRRILWAMWNSDARNRYTKTVKVAGLA------MGYHPHGDKSIQ 88
Query: 162 STIINLAQNFVGSNNINLLQPIGQFGTFL 190
+ +AQ+F +NNI L+ G FG L
Sbjct: 89 DALSQMAQDFTFANNIPLVSGEGTFGDVL 117
>gi|408792831|ref|ZP_11204441.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira meyeri serovar
Hardjo str. Went 5]
gi|408464241|gb|EKJ87966.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira meyeri serovar
Hardjo str. Went 5]
Length = 456
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLKRNDR-REVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
+ R+IP DGLKP R++L+ + R R K ++AG YH HG++S+ +
Sbjct: 29 DSRAIPQEIDGLKPVQRRILWAMWNSDARNRHTKTVKVAGLAM---GYHPHGDRSIQDAL 85
Query: 165 INLAQNFVGSNNINLLQPIGQFGTFL 190
+AQ+F +NN L+ G FG L
Sbjct: 86 SQMAQDFAFANNYPLVHGEGTFGDVL 111
>gi|189910211|ref|YP_001961766.1| DNA topoisomerase subunit A [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774887|gb|ABZ93188.1| DNA topoisomerase (ATP-hydrolyzing), subunit A [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
Length = 456
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLKRNDR-REVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
+ R+IP DGLKP R++L+ + R R K ++AG YH HG++S+ +
Sbjct: 29 DSRAIPQEIDGLKPVQRRILWAMWNSDARNRHTKTVKVAGLAM---GYHPHGDRSIQDAL 85
Query: 165 INLAQNFVGSNNINLLQPIGQFGTFL 190
+AQ+F +NN L+ G FG L
Sbjct: 86 SQMAQDFAFANNYPLVHGEGTFGDVL 111
>gi|183220091|ref|YP_001838087.1| DNA gyrase/topoisomerase subunit A [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|167778513|gb|ABZ96811.1| DNA gyrase/topoisomerase, type IV, subunit A [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 461
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLKRNDR-REVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
+ R+IP DGLKP R++L+ + R R K ++AG YH HG++S+ +
Sbjct: 34 DSRAIPQEIDGLKPVQRRILWAMWNSDARNRHTKTVKVAGLAM---GYHPHGDRSIQDAL 90
Query: 165 INLAQNFVGSNNINLLQPIGQFGTFL 190
+AQ+F +NN L+ G FG L
Sbjct: 91 SQMAQDFAFANNYPLVHGEGTFGDVL 116
>gi|373850421|ref|ZP_09593222.1| DNA topoisomerase (ATP-hydrolyzing) [Opitutaceae bacterium TAV5]
gi|372476586|gb|EHP36595.1| DNA topoisomerase (ATP-hydrolyzing) [Opitutaceae bacterium TAV5]
Length = 725
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 10/84 (11%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTIIN 166
+R++P + DGLKP R++L T +++D R KVA + G+ AYH HG+ S+ + ++
Sbjct: 95 DRAVPHIHDGLKPVQRRILHTLWEKDDGRFHKVANIVGATM---AYHPHGDASIGAALVA 151
Query: 167 LAQNFVGSNNINLLQPIGQFGTFL 190
+AQ L++P G FG L
Sbjct: 152 IAQRGW------LIEPQGNFGNAL 169
>gi|406889509|gb|EKD35680.1| hypothetical protein ACD_75C01819G0002 [uncultured bacterium]
Length = 668
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINL 167
ER+IPSL DGLKP R++L T D R KVA + G + + HG+QS+ + ++NL
Sbjct: 26 ERAIPSLEDGLKPVQRRLLQTLFNMEDGRFHKVANVVGETMK--LHPHGDQSIFAALVNL 83
Query: 168 AQNFVGSNNINLLQPIGQFGTF 189
SN L++ G FG
Sbjct: 84 ------SNKQYLIEQQGNFGNI 99
>gi|225164319|ref|ZP_03726587.1| DNA topoisomerase (ATP-hydrolyzing) [Diplosphaera colitermitum
TAV2]
gi|224801081|gb|EEG19409.1| DNA topoisomerase (ATP-hydrolyzing) [Diplosphaera colitermitum
TAV2]
Length = 732
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 10/84 (11%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTIIN 166
+R++P + DGLKP R++L T +++D R KVA + G+ AYH HG+ S+ + ++
Sbjct: 98 DRAVPHIDDGLKPVQRRILHTLWEKDDGRFHKVANIVGATM---AYHPHGDASIGAALVA 154
Query: 167 LAQNFVGSNNINLLQPIGQFGTFL 190
+AQ L++P G FG L
Sbjct: 155 IAQRGW------LIEPQGNFGNAL 172
>gi|391228477|ref|ZP_10264683.1| type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A
subunit [Opitutaceae bacterium TAV1]
gi|391218138|gb|EIP96558.1| type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A
subunit [Opitutaceae bacterium TAV1]
Length = 726
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 10/84 (11%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTIIN 166
+R++P + DGLKP R++L T +++D R KVA + G+ AYH HG+ S+ + ++
Sbjct: 96 DRAVPHIHDGLKPVQRRILHTLWEKDDGRFHKVANIVGATM---AYHPHGDASIGAALVA 152
Query: 167 LAQNFVGSNNINLLQPIGQFGTFL 190
+AQ L++P G FG L
Sbjct: 153 IAQRGW------LIEPQGNFGNAL 170
>gi|398349251|ref|ZP_10533954.1| DNA gyrase subunit A [Leptospira broomii str. 5399]
Length = 461
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 11/89 (12%)
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLKRNDR----REVKVAQLAGSVAEHSAYH-HGEQSLM 161
+ R+IP DGLKP R++L+ + R + VKVA LA YH HG++S+
Sbjct: 34 DSRAIPHEIDGLKPVQRRILWAMWNSDARNRFTKTVKVAGLA------MGYHPHGDRSIQ 87
Query: 162 STIINLAQNFVGSNNINLLQPIGQFGTFL 190
+ +AQ+F +NN L+ G FG L
Sbjct: 88 DALSQMAQDFTFANNFPLVAGEGTFGDVL 116
>gi|398344244|ref|ZP_10528947.1| DNA gyrase subunit A [Leptospira inadai serovar Lyme str. 10]
Length = 461
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 11/89 (12%)
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLKRNDR----REVKVAQLAGSVAEHSAYH-HGEQSLM 161
+ R+IP DGLKP R++L+ + R + VKVA LA YH HG++S+
Sbjct: 34 DSRAIPHEIDGLKPVQRRILWAMWNSDARNRFTKTVKVAGLA------MGYHPHGDRSIQ 87
Query: 162 STIINLAQNFVGSNNINLLQPIGQFGTFL 190
+ +AQ+F +NN L+ G FG L
Sbjct: 88 DALSQMAQDFTFANNFPLVAGEGTFGDVL 116
>gi|242095810|ref|XP_002438395.1| hypothetical protein SORBIDRAFT_10g016338 [Sorghum bicolor]
gi|241916618|gb|EER89762.1| hypothetical protein SORBIDRAFT_10g016338 [Sorghum bicolor]
Length = 146
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 238 DKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRK 297
+ L +A L + F+L+T++ S+M D G++ K+D+ QILKEFY RL +Y KRK
Sbjct: 85 ENLAQANEVDLQRKFELRTSIGTSNMHLLDSNGIIKKYDSPEQILKEFYDFRLAFYEKRK 144
>gi|149196296|ref|ZP_01873351.1| DNA gyrase subunit A [Lentisphaera araneosa HTCC2155]
gi|149140557|gb|EDM28955.1| DNA gyrase subunit A [Lentisphaera araneosa HTCC2155]
Length = 859
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRNDRRE---VKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R+IP + DGLKPG R+VLF K N R+ +K A++ G V YH HG+ S+ T+
Sbjct: 35 RAIPDVRDGLKPGMRRVLFAMDKLNLRKGSSYMKCARVVGDVI--GKYHPHGDGSVYDTM 92
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ+F S L+ G FG+
Sbjct: 93 VRMAQDF--SMRGMLIDGQGNFGSI 115
>gi|410493013|ref|YP_006908079.1| putative DNA topoisomerase [Campylobacter phage CP30A]
gi|404057072|gb|AFR52329.1| putative DNA topoisomerase [Campylobacter phage CP30A]
Length = 438
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y ++V+ +S D + +HK+ ++TT + CA DR + +
Sbjct: 259 DYKDYSLGDNFEYVINVSGDFWNNQ---NIHKLLGIETTDTENFTCA-DRNNFIKTYKDE 314
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ILKE+ V+LEY KRK Y + ++N+ +FI D + E +KK+++I
Sbjct: 315 IEILKEYIDVKLEYIQKRKQYKLSKYSDQIELISNKIKFIQAVLDKKVIFERKKKEDIIK 374
Query: 339 E 339
+
Sbjct: 375 Q 375
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 96 NKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHH 155
N L +++ DN RSI SL DG K RK+++ + + KV+ L +A S Y H
Sbjct: 8 NDNLCQYASYDNIRSIASLIDGFKNSGRKIVYFSKDLTNYK--KVSTLKSEIASKSQYLH 65
Query: 156 GEQSLMSTIINLAQNF-VGSNNINLLQPIGQFG 187
E L I N A++F G + L +P+ G
Sbjct: 66 NEDILPDIITNFARDFDCGPVTLPLFKPLSAIG 98
>gi|371671023|ref|YP_004956979.1| unnamed protein product [Campylobacter phage CPX]
gi|356649867|gb|AET34410.1| putative DNA topoisomerase II [Campylobacter phage CPX]
Length = 438
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y ++V+ +S D + +HK+ ++TT + CA DR + +
Sbjct: 259 DYKDYSLGDNFEYVINVSGDFWNNQ---NIHKLLGIETTDTENFTCA-DRNNFIKTYKDE 314
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ILKE+ V+LEY KRK Y + ++N+ +FI D + E +KK+++I
Sbjct: 315 IEILKEYIDVKLEYIQKRKQYKLSKYSDQIELISNKIKFIQAVLDKKVIFERKKKEDIIK 374
Query: 339 E 339
+
Sbjct: 375 Q 375
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 96 NKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHH 155
N L +++ DN RSI SL DG K RK+++ + + KV+ L +A S Y H
Sbjct: 8 NDNLCQYASYDNIRSIASLIDGFKNSGRKIVYFSKDLTNYK--KVSTLKSEIASKSQYLH 65
Query: 156 GEQSLMSTIINLAQNF-VGSNNINLLQPIGQFG 187
E L I N A++F G + L +P+ G
Sbjct: 66 NEDILPDIITNFARDFDCGPVTLPLFKPLSAIG 98
>gi|406888092|gb|EKD34681.1| hypothetical protein ACD_75C02237G0005 [uncultured bacterium]
Length = 670
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINL 167
ER+IPSL DGLKP R++L T D R KVA + G + + HG+QS+ + ++NL
Sbjct: 26 ERAIPSLEDGLKPVQRRLLQTLHNMEDGRFHKVANVVGETMK--LHPHGDQSIFAALVNL 83
Query: 168 AQNFVGSNNINLLQPIGQFGTFLFIFESTNLSGA 201
SN L++ G FG IF S A
Sbjct: 84 ------SNKQYLIEQQGNFGN---IFTGDRASAA 108
>gi|160892780|ref|ZP_02073570.1| hypothetical protein CLOL250_00311 [Clostridium sp. L2-50]
gi|156865821|gb|EDO59252.1| DNA gyrase/topoisomerase IV, A subunit [Clostridium sp. L2-50]
Length = 759
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTC--LKRNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
ER++P + DGLKP R++L++ L +D+ K A++ G YH HG+ S+ +
Sbjct: 28 ERALPDVRDGLKPVQRRILYSLNGLAGSDKPHRKCARIVGDTM--GKYHPHGDSSIYEGL 85
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+N+AQN+ I L+ P G FG+
Sbjct: 86 VNMAQNW--KLPIPLVDPHGNFGS 107
>gi|238695410|ref|YP_002922603.1| gp52 topoisomerase II, medium subunit [Enterobacteria phage JS10]
gi|220029546|gb|ACL78480.1| gp52 topoisomerase II, medium subunit [Enterobacteria phage JS10]
Length = 459
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCL---KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTII 165
R+IP++ DG KP R V+ CL + N + K+A +AG VA+ YHHGE S
Sbjct: 44 RAIPNMIDGFKPVQRFVVARCLDMARGNKEKFHKLASIAGGVAD-LGYHHGEGSAQEAGA 102
Query: 166 NLAQNFVGSNNINLLQPIGQFGTFL 190
+A + +NN LL G FG+ L
Sbjct: 103 LMANTW--NNNFPLLDGQGNFGSRL 125
>gi|238695150|ref|YP_002922344.1| topoisomerase medium subunit [Enterobacteria phage JSE]
gi|220029286|gb|ACL78221.1| topoisomerase medium subunit [Enterobacteria phage JSE]
Length = 454
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 10/110 (9%)
Query: 84 KTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRN--DRREV-KV 140
++ ++I + E KE ++S ER IP L DGLKP R V+ L+++ DR++ K+
Sbjct: 14 RSLESIVHNE--AKEYAIYSA--EERGIPQLVDGLKPVQRFVMECALQKSKGDRKKFRKM 69
Query: 141 AQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
A + VAE YHHGE + + +A + SNN LL G FG+ L
Sbjct: 70 ADIGSGVAE-LGYHHGETNAVEAGSLMANTW--SNNTPLLDGQGNFGSRL 116
>gi|157311570|ref|YP_001469613.1| gp52 topoisomerase II medium subunit [Enterobacteria phage Phi1]
gi|149380774|gb|ABR24779.1| gp52 topoisomerase II medium subunit [Enterobacteria phage Phi1]
Length = 448
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 10/110 (9%)
Query: 84 KTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRN--DRREV-KV 140
++ ++I + E KE ++S ER IP L DGLKP R V+ L+++ DR++ K+
Sbjct: 8 RSLESIVHNE--AKEYAIYSA--EERGIPQLVDGLKPVQRFVMECALQKSKGDRKKFRKM 63
Query: 141 AQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
A + VAE YHHGE + + +A + SNN LL G FG+ L
Sbjct: 64 ADIGSGVAE-LGYHHGETNAVEAGSLMANTW--SNNTPLLDGQGNFGSRL 110
>gi|33620672|ref|NP_891840.1| topoisomerase medium subunit [Enterobacteria phage RB49]
gi|33438555|gb|AAL15130.2| topoisomerase medium subunit [Enterobacteria phage RB49]
Length = 454
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 10/110 (9%)
Query: 84 KTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRN--DRREV-KV 140
++ ++I + E KE ++S ER IP L DGLKP R V+ L+++ DR++ K+
Sbjct: 14 RSLESIVHNE--AKEYAIYSA--EERGIPQLVDGLKPVQRFVMECALQKSKGDRKKFRKM 69
Query: 141 AQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
A + VAE YHHGE + + +A + SNN LL G FG+ L
Sbjct: 70 ADIGSGVAE-LGYHHGETNAVEAGSLMANTW--SNNTPLLDGQGNFGSRL 116
>gi|295094763|emb|CBK83854.1| Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A
subunit [Coprococcus sp. ART55/1]
Length = 758
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTC--LKRNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
ER++P + DGLKP R++L++ L +D+ K A++ G YH HG+ S+ +
Sbjct: 28 ERALPDVRDGLKPVQRRILYSLDGLAGSDKPHRKCARIVGDT--MGKYHPHGDSSIYEGL 85
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+N+AQN+ I L+ P G FG
Sbjct: 86 VNMAQNW--KLPIPLVDPHGNFGA 107
>gi|163814199|ref|ZP_02205591.1| hypothetical protein COPEUT_00353 [Coprococcus eutactus ATCC 27759]
gi|158450648|gb|EDP27643.1| DNA gyrase/topoisomerase IV, A subunit [Coprococcus eutactus ATCC
27759]
Length = 758
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTC--LKRNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
ER++P + DGLKP R++L++ L +D+ K A++ G YH HG+ S+ +
Sbjct: 28 ERALPDVRDGLKPVQRRILYSLDGLAGSDKPHRKCARIVGDT--MGKYHPHGDSSIYEGL 85
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+N+AQN+ I L+ P G FG
Sbjct: 86 VNMAQNW--KLPIPLVDPHGNFGA 107
>gi|329900831|ref|ZP_08272599.1| DNA gyrase subunit A [Oxalobacteraceae bacterium IMCC9480]
gi|327549359|gb|EGF33929.1| DNA gyrase subunit A [Oxalobacteraceae bacterium IMCC9480]
Length = 884
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R+VLF + N +R VK A++ G V YH HG+QS+ T+
Sbjct: 32 RALPDVRDGLKPVHRRVLFAMHEMNNVWNRPYVKCARVVGEVM--GKYHPHGDQSIYDTL 89
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ+F S L+ G FG+
Sbjct: 90 VRMAQDF--SLRYTLVDGQGNFGSV 112
>gi|307069700|ref|YP_003878177.1| DNA gyrase subunit A [Candidatus Zinderia insecticola CARI]
gi|306482960|gb|ADM89831.1| DNA gyrase A subunit [Candidatus Zinderia insecticola CARI]
Length = 511
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 8/90 (8%)
Query: 104 NMDNERSIPSLCDGLKPGSRKVLFTCLK-RNDRRE--VKVAQLAGSVAEHSAYH-HGEQS 159
N+ + R++P + DGLKP R++L+T K +N+ + +K A++ G V YH HG+ S
Sbjct: 11 NVISNRALPDIIDGLKPVHRRILYTMYKIKNNYKNNFIKCARIVGEVM--GKYHPHGDNS 68
Query: 160 LMSTIINLAQNFVGSNNINLLQPIGQFGTF 189
+ ++ +AQNF S L++ G FG+
Sbjct: 69 IYDALVRMAQNF--SLKYTLIKGQGNFGSI 96
>gi|161622523|ref|YP_001595383.1| gp52 topoisomerase II medium subunit [Enterobacteria phage JS98]
gi|160213829|gb|ABX11168.1| gp52 topoisomerase II medium subunit [Enterobacteria phage JS98]
Length = 442
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCL---KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTII 165
R+IP++ DG KP R V+ CL + N + K+A +AG VA+ YHHGE S
Sbjct: 27 RAIPNMIDGFKPVQRFVVARCLDMARGNKEKFHKLASIAGGVAD-LGYHHGEGSAQEAGA 85
Query: 166 NLAQNFVGSNNINLLQPIGQFGTFL 190
+A + +NN LL G FG+ L
Sbjct: 86 LMANTW--NNNFPLLDGQGNFGSRL 108
>gi|359687586|ref|ZP_09257587.1| DNA gyrase subunit A [Leptospira licerasiae serovar Varillal str.
MMD0835]
gi|418751401|ref|ZP_13307687.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira licerasiae str.
MMD4847]
gi|418756464|ref|ZP_13312652.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira licerasiae
serovar Varillal str. VAR 010]
gi|384116135|gb|EIE02392.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira licerasiae
serovar Varillal str. VAR 010]
gi|404274004|gb|EJZ41324.1| DNA gyrase/topoisomerase IV, A subunit [Leptospira licerasiae str.
MMD4847]
Length = 461
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 11/89 (12%)
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLKRNDR----REVKVAQLAGSVAEHSAYH-HGEQSLM 161
+ R+IP DGLKP R++L+ + R + VKVA LA YH HG++S+
Sbjct: 34 DSRAIPHEIDGLKPVQRRILWAMWNSDARNRFTKTVKVAGLA------MGYHPHGDRSIQ 87
Query: 162 STIINLAQNFVGSNNINLLQPIGQFGTFL 190
+ +AQ+F +NN L+ G FG L
Sbjct: 88 DALSQMAQDFTFANNRPLVAGEGTFGDVL 116
>gi|302340766|ref|YP_003805972.1| DNA gyrase subunit alpha [Spirochaeta smaragdinae DSM 11293]
gi|301637951|gb|ADK83378.1| DNA gyrase, A subunit [Spirochaeta smaragdinae DSM 11293]
Length = 818
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLK---RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R++L++ + R+DR K ++ G V YH HG+QS+ +
Sbjct: 32 RALPDVRDGLKPVHRRILYSMNEMGLRSDRAFKKCGRIVGDVL--GKYHPHGDQSIYDAL 89
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ LAQ+F S +++P G FG+
Sbjct: 90 VRLAQDF--SMRYPVVRPQGNFGSV 112
>gi|223936082|ref|ZP_03627996.1| DNA topoisomerase (ATP-hydrolyzing) [bacterium Ellin514]
gi|223895304|gb|EEF61751.1| DNA topoisomerase (ATP-hydrolyzing) [bacterium Ellin514]
Length = 701
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 22/127 (17%)
Query: 75 GIGEDYLYTKTTKA-ITYTEF-VNK-ELILFSNMD-----------NERSIPSLCDGLKP 120
G G+D++ +T I F +NK E L MD +R+IP+L DGLKP
Sbjct: 31 GNGKDHVVAETAATEIAVRPFDINKVETPLHKRMDFSFLEYASYVIRDRAIPNLADGLKP 90
Query: 121 GSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLL 180
R++L++ +++D R +KVA ++G A++ + HGE ++ ++ V +N L+
Sbjct: 91 VQRRILWSLHEKDDGRFIKVATISGHCAQY--HPHGEAAIGDALV------VITNKRYLI 142
Query: 181 QPIGQFG 187
+ G FG
Sbjct: 143 EGQGNFG 149
>gi|237747506|ref|ZP_04577986.1| DNA gyrase subunit A [Oxalobacter formigenes HOxBLS]
gi|229378857|gb|EEO28948.1| DNA gyrase subunit A [Oxalobacter formigenes HOxBLS]
Length = 872
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R+VLF + N +R VK A++ G V YH HG+QS+ T+
Sbjct: 32 RALPDVRDGLKPVHRRVLFGMHEMNNTWNRPYVKCARVVGEVM--GKYHPHGDQSIYDTL 89
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ+F S L+ G FG+
Sbjct: 90 VRMAQDF--SLRYTLVDGQGNFGSI 112
>gi|311993520|ref|YP_004010385.1| gp52 topoisomerase II medium subunit [Acinetobacter phage Acj9]
gi|295917477|gb|ADG60148.1| gp52 topoisomerase II medium subunit [Acinetobacter phage Acj9]
Length = 447
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 92 TEFVNKELILFSNMDNE-RSIPSLCDGLKPGSRKVLFTCLK----RNDRREVKVAQLAGS 146
T+ +N E +++ E R+IP+L DGLKP R +L+ ++ ++D+ K+A +AG
Sbjct: 9 TQIINNEAKIYAMYTVENRAIPNLIDGLKPVQRFMLYRAIQLAKGKSDKFH-KLASVAGG 67
Query: 147 VAEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
VA+ + YHHGE S +A + +NN L G FG+ L
Sbjct: 68 VAD-AGYHHGENSAQEAGALMANTW--NNNFPFLDGQGNFGSRL 108
>gi|237747594|ref|ZP_04578074.1| DNA gyrase subunit A [Oxalobacter formigenes OXCC13]
gi|229378956|gb|EEO29047.1| DNA gyrase subunit A [Oxalobacter formigenes OXCC13]
Length = 877
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R+VLF + N +R VK A++ G V YH HG+QS+ T+
Sbjct: 32 RALPDVRDGLKPVHRRVLFGMHEMNNAWNRPYVKCARVVGEVM--GKYHPHGDQSIYDTL 89
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ+F S L+ G FG+
Sbjct: 90 VRMAQDF--SLRYTLVDGQGNFGSI 112
>gi|422934151|ref|YP_007004187.1| topoisomerase II medium subunit [Enterobacteria phage Bp7]
gi|345450660|gb|AEN93863.1| topoisomerase II medium subunit [Enterobacteria phage Bp7]
Length = 442
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCL---KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTII 165
R+IP++ DG KP R V+ CL + N + K+A +AG VA+ YHHGE S
Sbjct: 27 RAIPNMIDGFKPVQRFVVARCLDMARGNKEKFHKLASIAGGVAD-LGYHHGEGSAQEAGA 85
Query: 166 NLAQNFVGSNNINLLQPIGQFGTFL 190
+A + +NN LL G FG+ L
Sbjct: 86 LMANTW--NNNYPLLDGQGNFGSRL 108
>gi|299779202|ref|YP_003734396.1| 52 gene product [Enterobacteria phage IME08]
gi|298105931|gb|ADI55575.1| gp52 topoisomerase II medium subunit [Enterobacteria phage IME08]
Length = 460
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCL---KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTII 165
R+IP++ DG KP R V+ CL + N + K+A +AG VA+ YHHGE S
Sbjct: 45 RAIPNMIDGFKPVQRFVVARCLDMARGNKEKFHKLASIAGGVAD-LGYHHGEGSAQEAGA 103
Query: 166 NLAQNFVGSNNINLLQPIGQFGTFL 190
+A + +NN LL G FG+ L
Sbjct: 104 LMANTW--NNNYPLLDGQGNFGSRL 126
>gi|51246133|ref|YP_066017.1| DNA topoisomerase IV subunit A [Desulfotalea psychrophila LSv54]
gi|50877170|emb|CAG37010.1| probable topoisomerase IV, subunit A [Desulfotalea psychrophila
LSv54]
Length = 663
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINL 167
ER+IP++ DGLKP R++L T D R KVA L G + + HG+ S+ S ++NL
Sbjct: 26 ERAIPAIDDGLKPVQRRILQTLFNMEDGRFHKVANLVGETMK--LHPHGDASIFSALVNL 83
Query: 168 AQNFVGSNNINLLQPIGQFG 187
A N L++ G FG
Sbjct: 84 A------NKGFLIERQGNFG 97
>gi|325989384|ref|YP_004249083.1| Topoisomerase II subunit A [Mycoplasma suis KI3806]
gi|323574469|emb|CBZ40119.1| Topoisomerase II subunit A [Mycoplasma suis KI3806]
Length = 894
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 12/119 (10%)
Query: 75 GIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKR-- 132
G+ + K + F+N L + ++ R++P L DGLKP R++L+ +
Sbjct: 16 GLPSSNVENKDISVVCDESFLNYSLSVITS----RALPDLKDGLKPVHRRILYAAYEEKL 71
Query: 133 -NDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTF 189
ND R K A L G+V +YH HG++S+ ++ L+Q+F LL+ G FG+
Sbjct: 72 FNDSRFKKSATLVGAVM--GSYHPHGDKSIYDALVRLSQDF--KMRYPLLEGQGNFGSI 126
>gi|325972891|ref|YP_004249955.1| DNA gyrase subunit A [Mycoplasma suis str. Illinois]
gi|323651493|gb|ADX97575.1| DNA gyrase, subunit A [Mycoplasma suis str. Illinois]
Length = 894
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 12/119 (10%)
Query: 75 GIGEDYLYTKTTKAITYTEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKR-- 132
G+ + K + F+N L + ++ R++P L DGLKP R++L+ +
Sbjct: 16 GLPSSNVENKDISVVCDESFLNYSLSVITS----RALPDLKDGLKPVHRRILYAAYEEKL 71
Query: 133 -NDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTF 189
ND R K A L G+V +YH HG++S+ ++ L+Q+F LL+ G FG+
Sbjct: 72 FNDSRFKKSATLVGAVM--GSYHPHGDKSIYDALVRLSQDF--KMRYPLLEGQGNFGSI 126
>gi|1478249|emb|CAA99278.1| DNA topoisomerase II [Meyerozyma guilliermondii]
Length = 389
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 277 TTNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEM 336
+ N+ILK++Y RLE Y +RKD + + +L+ QARFI + L I N+K+ EM
Sbjct: 2 SANEILKDYYWARLELYQRRKDMMAENFQNQLTRLSEQARFIKLIIEKKLTIANKKRLEM 61
Query: 337 IAELIKRKY 345
+ +L K K+
Sbjct: 62 VDDLKKLKF 70
>gi|311992744|ref|YP_004009612.1| gp52 topoisomerase II medium subunit [Acinetobacter phage Ac42]
gi|298684527|gb|ADI96488.1| gp52 topoisomerase II medium subunit [Acinetobacter phage Ac42]
Length = 442
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Query: 92 TEFVNKELILFSNMDNE-RSIPSLCDGLKPGSRKVLFTC--LKRNDRREV-KVAQLAGSV 147
TE +N E ++ E R+IP++ DG+KP R +L+ L + D+ ++ K+A +AG V
Sbjct: 8 TEVINNEAKEYAIYTVEQRAIPNMIDGMKPVHRFMLYRAMQLAKGDKEKMHKLASVAGGV 67
Query: 148 AEHSAYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTFL 190
A+ + YHHGE S +A + SNN L G FG+ L
Sbjct: 68 AD-AGYHHGEGSAQDAGALMANTW--SNNFPFLDGEGNFGSRL 107
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 246 DGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTTNQILKEFYAVRLEYYAKRKDYLEGVLG 305
D + K+F L L+ ++ D G L F++ +++K F VR EY KR
Sbjct: 288 DKIMKMFGLIERLS-QNITVIDENGKLRVFESAVELIKHFVEVRTEYVKKRIHAKIIETD 346
Query: 306 AEALKLTNQARFIVEKCDGDLRIENRKKKEMIAEL 340
++A LT +ARFI GD+ I + +K+++ EL
Sbjct: 347 SKAKILTAKARFINAVIKGDIVIAGKTRKQLVEEL 381
>gi|254293784|ref|YP_003059807.1| DNA gyrase subunit alpha [Hirschia baltica ATCC 49814]
gi|254042315|gb|ACT59110.1| DNA gyrase, A subunit [Hirschia baltica ATCC 49814]
Length = 981
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R++LF+ ++ D+ K A++ G V YH HG+QS+ +
Sbjct: 67 RALPDVRDGLKPVHRRILFSMSEQGYTFDKAYKKSARVVGDVI--GKYHPHGDQSVYDAL 124
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQNF S + LL G FG+
Sbjct: 125 VRMAQNF--SMGLPLLDGQGNFGSM 147
>gi|397677633|ref|YP_006519169.1| DNA gyrase subunit A [Mycoplasma wenyonii str. Massachusetts]
gi|395455898|gb|AFN64840.1| DNA gyrase subunit A [Mycoplasma wenyonii str. Massachusetts]
Length = 903
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKR---NDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P L DGLKP R++L++ + +D R K A L G+V YH HG+ S+ +
Sbjct: 45 RALPDLRDGLKPVHRRILYSAYEEKMFSDTRFRKSATLVGAVM--GGYHPHGDSSIYGAL 102
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ LAQ+F S LL+ G FG+
Sbjct: 103 VRLAQDF--SMRYPLLEGQGNFGSI 125
>gi|134296545|ref|YP_001120280.1| DNA topoisomerase IV subunit A [Burkholderia vietnamiensis G4]
gi|134139702|gb|ABO55445.1| DNA topoisomerase IV subunit A [Burkholderia vietnamiensis G4]
Length = 773
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 86 TKAITYTEFVNKELILFS-NMDNERSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVA 141
T A+T + + + ++ ++ R++P +CDG KP R++LF + D + VK A
Sbjct: 17 TDALTLGNYAEQAYLSYAVSVVKSRALPDVCDGQKPVQRRILFAMNEMGLGPDAKPVKSA 76
Query: 142 QLAGSVAEHSAYH-HGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
++ G V YH HG+QS ++ LAQ+F S L+ G FG+
Sbjct: 77 RVVGDVL--GKYHPHGDQSAYDALVRLAQDF--SLRYPLIDGQGNFGS 120
>gi|387902908|ref|YP_006333247.1| Topoisomerase IV subunit A [Burkholderia sp. KJ006]
gi|387577800|gb|AFJ86516.1| Topoisomerase IV subunit A [Burkholderia sp. KJ006]
Length = 773
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 86 TKAITYTEFVNKELILFS-NMDNERSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVA 141
T A+T + + + ++ ++ R++P +CDG KP R++LF + D + VK A
Sbjct: 17 TDALTLGNYAEQAYLSYAVSVVKSRALPDVCDGQKPVQRRILFAMNEMGLGPDAKPVKSA 76
Query: 142 QLAGSVAEHSAYH-HGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
++ G V YH HG+QS ++ LAQ+F S L+ G FG+
Sbjct: 77 RVVGDVL--GKYHPHGDQSAYDALVRLAQDF--SLRYPLIDGQGNFGS 120
>gi|217978381|ref|YP_002362528.1| DNA gyrase subunit A [Methylocella silvestris BL2]
gi|217503757|gb|ACK51166.1| DNA gyrase, A subunit [Methylocella silvestris BL2]
Length = 927
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R++LF+ ++N DR VK A++ G V YH HG+ ++ +
Sbjct: 40 RALPDVRDGLKPVHRRILFSMHEQNHTPDRPYVKCARIVGDV--MGKYHPHGDSAIYDAL 97
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ F S + L+ G FG+
Sbjct: 98 VRMAQGF--SMRLPLIDGQGNFGSV 120
>gi|343178370|emb|CBZ42201.1| hypothetical protein [Campylobacter phage CP81]
Length = 438
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 96 NKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHH 155
N L +++ DN RSI SL DG K RK+++ + + KV+ L +A S Y H
Sbjct: 8 NDNLCQYASYDNIRSIASLIDGFKNSGRKIVYFSKDLTNYK--KVSTLKSEIASKSQYLH 65
Query: 156 GEQSLMSTIINLAQNF-VGSNNINLLQPIGQFG 187
E L I N A++F G + L +P+ G
Sbjct: 66 NEDILPDIITNFARDFDCGPVTLPLFKPLSAIG 98
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 219 DYKEYHTDTTVKFVVTMSPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDTT 278
DYK+Y ++V+ +S D + +HK+ ++TT + CA DR + +
Sbjct: 259 DYKDYSLGDNFEYVINVSGDFWNNQ---NIHKLLGIETTDTENFTCA-DRNNFIKTYKDE 314
Query: 279 NQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRIENRKKKEMIA 338
+ILKE+ V+LEY KRK + + + N+ +FI D + E +KK+++I
Sbjct: 315 IEILKEYIDVKLEYIQKRKQHKLSKYSDQIELINNKIKFIQAVLDKKVIFERKKKEDIIK 374
Query: 339 E 339
+
Sbjct: 375 Q 375
>gi|311992987|ref|YP_004009854.1| gp52 DNA topoisomerase II medium subunit [Acinetobacter phage
Acj61]
gi|295815276|gb|ADG36202.1| gp52 DNA topoisomerase II medium subunit [Acinetobacter phage
Acj61]
Length = 465
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCL---KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTII 165
R+IP+L DG KP R +++ L K N ++ K+A +AG VA+ + YHHGE S
Sbjct: 47 RAIPNLMDGFKPVQRFMVYRALEMAKGNHQKFHKLASVAGGVAD-AGYHHGENSAQEAGA 105
Query: 166 NLAQNFVGSNNINLLQPIGQFGTFL 190
+A + +NN L G FG+ L
Sbjct: 106 LMANTW--NNNFPFLDGQGNFGSRL 128
>gi|220924060|ref|YP_002499362.1| DNA gyrase subunit A [Methylobacterium nodulans ORS 2060]
gi|219948667|gb|ACL59059.1| DNA gyrase, A subunit [Methylobacterium nodulans ORS 2060]
Length = 911
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P DGLKP R++L++ + DR+ VK A++ G V YH HG+QS+ +
Sbjct: 43 RALPDARDGLKPVHRRILYSMYENGYLPDRKYVKSARIVGDV--MGQYHPHGDQSIYDAL 100
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ+F + I L+ G FG+
Sbjct: 101 VRMAQDF--AMRIMLVDGQGNFGSI 123
>gi|402851160|ref|ZP_10899331.1| DNA gyrase subunit A [Rhodovulum sp. PH10]
gi|402498530|gb|EJW10271.1| DNA gyrase subunit A [Rhodovulum sp. PH10]
Length = 967
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P DGLKP R++LF+ + DR+ VK A++ G V YH HG+Q++ +
Sbjct: 70 RALPDARDGLKPVHRRILFSMHENGHLPDRKYVKSARVVGDV--MGKYHPHGDQAIYDAL 127
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ+F S + L+ G FG+
Sbjct: 128 VRMAQDF--SMRLPLIDGQGNFGSV 150
>gi|242095812|ref|XP_002438396.1| hypothetical protein SORBIDRAFT_10g016352 [Sorghum bicolor]
gi|241916619|gb|EER89763.1| hypothetical protein SORBIDRAFT_10g016352 [Sorghum bicolor]
Length = 328
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 220 YKEYHTDTTVKFVVTM--SPDKLHKAEMDGLHKVFKLQTTLAISSMCAFDRYGVLTKFDT 277
Y++ VK ++ + + + L +A L + F+L+T++ S+M D G++
Sbjct: 69 YEKKRGGNDVKIMIHLHENSENLARANEVDLQRKFELRTSMGTSNMHLLDSNGII----- 123
Query: 278 TNQILKEFYAVRLEYYAKRKDYLEGVLGAEALKLTNQARFIVEKCDGDLRI 328
+ILKEFYA+RL +Y KRK L + G + N+ RFI G++++
Sbjct: 124 --KILKEFYALRLAFYEKRKQKLVEMAGRDLKMAQNKVRFIKAVRTGEIKL 172
>gi|374586983|ref|ZP_09660075.1| DNA gyrase subunit A [Leptonema illini DSM 21528]
gi|373875844|gb|EHQ07838.1| DNA gyrase subunit A [Leptonema illini DSM 21528]
Length = 841
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLK---RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R++LF + R+DR VK A++ G V + +H HG+ ++ T+
Sbjct: 62 RALPDVRDGLKPVHRRILFAMHERAWRHDRPFVKCAKIVGEVIGN--FHPHGDGAVYDTM 119
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ+FV + L++ G FG+
Sbjct: 120 VRMAQDFV--MKMPLVEGQGNFGSI 142
>gi|297621778|ref|YP_003709915.1| DNA topoisomerase IV, subunit A [Waddlia chondrophila WSU 86-1044]
gi|297377079|gb|ADI38909.1| DNA topoisomerase IV, subunit A [Waddlia chondrophila WSU 86-1044]
gi|337292397|emb|CCB90423.1| DNA topoisomerase 4 subunit A [Waddlia chondrophila 2032/99]
Length = 633
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTIIN 166
+R+IP + DGLKP R++L T K +D + KVA +AG AYH HG+ +++ ++N
Sbjct: 22 DRAIPDVVDGLKPVQRRILHTLYKIHDGKLHKVANVAGQTM---AYHPHGDAAIIDALVN 78
Query: 167 LA 168
+A
Sbjct: 79 MA 80
>gi|390944444|ref|YP_006408205.1| type IIA topoisomerase subunit A [Belliella baltica DSM 15883]
gi|390417872|gb|AFL85450.1| type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A
subunit [Belliella baltica DSM 15883]
Length = 874
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINL 167
ER++P++ DGLKP R++L + +D R KVA + G ++ + HG+QS+ I+NL
Sbjct: 40 ERAVPAIEDGLKPVQRRILHAMKEMDDGRFNKVANVIGQSMQY--HPHGDQSIGDAIVNL 97
Query: 168 AQ 169
Q
Sbjct: 98 GQ 99
>gi|163853963|ref|YP_001642006.1| DNA gyrase subunit A [Methylobacterium extorquens PA1]
gi|218532904|ref|YP_002423720.1| DNA gyrase subunit alpha [Methylobacterium extorquens CM4]
gi|240141417|ref|YP_002965897.1| DNA gyrase subunit A [Methylobacterium extorquens AM1]
gi|254563932|ref|YP_003071027.1| DNA gyrase subunit A [Methylobacterium extorquens DM4]
gi|418062579|ref|ZP_12700351.1| DNA gyrase, A subunit [Methylobacterium extorquens DSM 13060]
gi|163665568|gb|ABY32935.1| DNA gyrase, A subunit [Methylobacterium extorquens PA1]
gi|218525207|gb|ACK85792.1| DNA gyrase, A subunit [Methylobacterium extorquens CM4]
gi|240011394|gb|ACS42620.1| DNA gyrase, subunit A (type II topoisomerase) [Methylobacterium
extorquens AM1]
gi|254271210|emb|CAX27222.1| DNA gyrase, subunit A (type II topoisomerase) [Methylobacterium
extorquens DM4]
gi|373563865|gb|EHP90021.1| DNA gyrase, A subunit [Methylobacterium extorquens DSM 13060]
Length = 911
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P DGLKP R++LF + +RR VK A++ G V YH HG+QS+ +
Sbjct: 43 RALPDARDGLKPVHRRILFAAHESGHLPERRYVKSARIVGDVI--GKYHPHGDQSIYDAL 100
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ+F S + L+ G FG+
Sbjct: 101 VRMAQDF--SMRLMLIDGQGNFGSV 123
>gi|410692518|ref|YP_003623139.1| DNA topoisomerase 4 subunit A (Topoisomerase IV subunit A)
[Thiomonas sp. 3As]
gi|294338942|emb|CAZ87286.1| DNA topoisomerase 4 subunit A (Topoisomerase IV subunit A)
[Thiomonas sp. 3As]
Length = 777
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDGLKP R++L+ + D + VK A++ G V +H HG+Q+ +
Sbjct: 41 RALPDVCDGLKPVQRRILYAMWRMGLTADAKPVKSARVVGDVLGR--FHPHGDQAAYDAL 98
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ L+QNF + L+ G FG+
Sbjct: 99 VRLSQNF--AQRYPLIDGQGNFGS 120
>gi|365894352|ref|ZP_09432500.1| DNA gyrase, subunit A, type II topoisomerase [Bradyrhizobium sp.
STM 3843]
gi|365424890|emb|CCE05042.1| DNA gyrase, subunit A, type II topoisomerase [Bradyrhizobium sp.
STM 3843]
Length = 921
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 14/109 (12%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P DGLKP R++L++ ++ D++ VK A++ G V YH HG+QS+ +
Sbjct: 42 RALPDARDGLKPVHRRILYSMYEQGHTPDKKYVKSARVVGDVI--GKYHPHGDQSIYDAM 99
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF------LFIFESTNLSGAVVNALD 207
+ +AQ+F S + L+ G FG+ + + L+ A + LD
Sbjct: 100 VRMAQDF--SMRVPLIDGQGNFGSVDGDPPAAYRYTEARLAKAAIPLLD 146
>gi|357978919|emb|CCE66540.1| DNA gyrase subunit A [Candidatus Mycoplasma haemominutum
'Birmingham 1']
Length = 990
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKR---NDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P L DGLKP R++L++ + ND R K A L G+V +YH HG+ S+ +
Sbjct: 45 RALPDLRDGLKPVHRRILYSAYEEKMFNDSRFKKSAALVGAVM--GSYHPHGDSSIYGAL 102
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ L Q+F + LL+ G FG+
Sbjct: 103 VRLCQDF--NMRYPLLEGQGNFGSI 125
>gi|381179305|ref|ZP_09888161.1| DNA gyrase subunit A [Treponema saccharophilum DSM 2985]
gi|380768812|gb|EIC02795.1| DNA gyrase subunit A [Treponema saccharophilum DSM 2985]
Length = 828
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMST 163
+R++P + DGLKP R++L+ K N K AQ+ G V H YH HG+ S+
Sbjct: 35 QRALPDVRDGLKPVHRRILYAMDKLNLVSGGPTRKCAQIVGEVLGH--YHPHGDASVYDA 92
Query: 164 IINLAQNFVGSNNINLLQPIGQFGTF 189
++ L Q+F S + P G FGT
Sbjct: 93 LVRLGQDF--SQRYTTVTPKGNFGTI 116
>gi|148255734|ref|YP_001240319.1| DNA gyrase subunit A [Bradyrhizobium sp. BTAi1]
gi|146407907|gb|ABQ36413.1| DNA gyrase subunit A [Bradyrhizobium sp. BTAi1]
Length = 915
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P DGLKP R++L++ ++ D++ VK A++ G V YH HG+QS+ +
Sbjct: 42 RALPDARDGLKPVHRRILYSMYEQGHTPDKKYVKSARVVGDVI--GKYHPHGDQSIYDAM 99
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ+F S + L+ G FG+
Sbjct: 100 VRMAQDF--SMRVPLIDGQGNFGSV 122
>gi|300692059|ref|YP_003753054.1| DNA topoisomerase IV subunit A [Ralstonia solanacearum PSI07]
gi|299079119|emb|CBJ51786.1| DNA topoisomerase IV, subunit A [Ralstonia solanacearum PSI07]
Length = 781
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Query: 78 EDYLY--TKTTKAITYTEFVNKELILFS-NMDNERSIPSLCDGLKPGSRKVLFTCLK--- 131
+D L+ ++ +A+T + + + ++ ++ R++P + DG KP R++LF +
Sbjct: 4 QDILFDPSEPAEALTLAHYAERAYLDYAVSVVKGRALPEVADGQKPVQRRILFAMHEMGL 63
Query: 132 RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
R D + VK A++ G V YH HG+QS ++ LAQ+F S L+ G FG+
Sbjct: 64 RADAKPVKSARVVGDVL--GKYHPHGDQSAYDALVRLAQDF--SLRYPLIDGQGNFGS 117
>gi|441462844|gb|AGC35132.1| topoisomerase II medium subunit [Escherichia phage PBECO 4]
Length = 470
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 92 TEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHS 151
+++VN + +S +R+IP + DGLK RK +FT K + E+K AG +
Sbjct: 25 SDYVNTTSLEYSMYTLDRAIPGI-DGLKSSQRKAIFTLSKIS--GEIKTVSCAGKMISDG 81
Query: 152 AYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
Y HG+ S T+ NLA +NN L+ G FGT
Sbjct: 82 IYLHGDTSASGTLQNLASPV--ANNYPLIGKRGGFGT 116
>gi|166890|gb|AAA32877.1| topoisomerase II, partial [Arabidopsis thaliana]
Length = 88
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 23/31 (74%), Positives = 26/31 (83%)
Query: 158 QSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
QSL S II +AQ++VGSNNINLL P GQFGT
Sbjct: 1 QSLASAIIGMAQDYVGSNNINLLLPNGQFGT 31
>gi|344170680|emb|CCA83106.1| DNA topoisomerase IV, subunit A [blood disease bacterium R229]
Length = 781
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Query: 78 EDYLY--TKTTKAITYTEFVNKELILFS-NMDNERSIPSLCDGLKPGSRKVLFTCLK--- 131
+D L+ ++ +A+T + + + ++ ++ R++P + DG KP R++LF +
Sbjct: 4 QDILFDPSEPAEALTLAHYAERAYLDYAVSVVKGRALPEVADGQKPVQRRILFAMHEMGL 63
Query: 132 RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
R D + VK A++ G V YH HG+QS ++ LAQ+F S L+ G FG+
Sbjct: 64 RADAKPVKSARVVGDVL--GKYHPHGDQSAYDALVRLAQDF--SLRYPLIDGQGNFGS 117
>gi|456355562|dbj|BAM90007.1| DNA gyrase subunit A [Agromonas oligotrophica S58]
Length = 914
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P DGLKP R++L++ ++ D++ VK A++ G V YH HG+QS+ +
Sbjct: 42 RALPDARDGLKPVHRRILYSMYEQGHTPDKKYVKSARVVGDVI--GKYHPHGDQSIYDAM 99
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ+F S + L+ G FG+
Sbjct: 100 VRMAQDF--SMRVPLIDGQGNFGSV 122
>gi|344174100|emb|CCA85881.1| DNA topoisomerase IV, subunit A [Ralstonia syzygii R24]
Length = 781
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Query: 78 EDYLY--TKTTKAITYTEFVNKELILFS-NMDNERSIPSLCDGLKPGSRKVLFTCLK--- 131
+D L+ ++ +A+T + + + ++ ++ R++P + DG KP R++LF +
Sbjct: 4 QDILFDPSEPAEALTLAHYAERAYLDYAVSVVKGRALPEVADGQKPVQRRILFAMHEMGL 63
Query: 132 RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
R D + VK A++ G V YH HG+QS ++ LAQ+F S L+ G FG+
Sbjct: 64 RADAKPVKSARVVGDVL--GKYHPHGDQSAYDALVRLAQDF--SLRYPLIDGQGNFGS 117
>gi|256422125|ref|YP_003122778.1| DNA topoisomerase IV subunit A [Chitinophaga pinensis DSM 2588]
gi|256037033|gb|ACU60577.1| DNA topoisomerase (ATP-hydrolyzing) [Chitinophaga pinensis DSM
2588]
Length = 846
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINL 167
ER++PS+ DGLKP R++L + +D R KVA + GS + + HG+ S+ I+NL
Sbjct: 38 ERAVPSVEDGLKPVQRRILHAMKEMDDGRFNKVANVIGSTMQF--HPHGDASIGDAIVNL 95
Query: 168 AQ 169
Q
Sbjct: 96 GQ 97
>gi|451948440|ref|YP_007469035.1| type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A
subunit [Desulfocapsa sulfexigens DSM 10523]
gi|451907788|gb|AGF79382.1| type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A
subunit [Desulfocapsa sulfexigens DSM 10523]
Length = 668
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINL 167
ER+IP + DGLKP R++L T +D R KVA + G A + HG+QS+ + ++NL
Sbjct: 26 ERAIPDINDGLKPVQRRILQTLHNMDDGRFHKVANVVG--ATMKLHPHGDQSIFAALVNL 83
Query: 168 A 168
A
Sbjct: 84 A 84
>gi|423261842|ref|YP_007010415.1| topoisomerase II medium subunit [Aeromonas phage CC2]
gi|394778363|gb|AFN39570.1| topoisomerase II medium subunit [Aeromonas phage CC2]
Length = 447
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLA 168
R++PS+ DG KP R VL++ +K + K A L G ++++ Y HGE S + +A
Sbjct: 27 RALPSMIDGFKPSQRFVLYSTIKNASKDFKKSAFLCGVISDY-GYPHGEASGYDVLAGMA 85
Query: 169 QNFVGSNNINLLQPIGQFGT 188
+ +NN +++ G FG+
Sbjct: 86 TQY--ANNFPVIKGRGNFGS 103
>gi|421888842|ref|ZP_16319918.1| DNA topoisomerase IV, subunit A [Ralstonia solanacearum K60-1]
gi|378965784|emb|CCF96666.1| DNA topoisomerase IV, subunit A [Ralstonia solanacearum K60-1]
Length = 783
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Query: 78 EDYLY--TKTTKAITYTEFVNKELILFS-NMDNERSIPSLCDGLKPGSRKVLFTCLK--- 131
+D L+ ++ +A+T + + + ++ ++ R++P + DG KP R++LF +
Sbjct: 4 QDILFDPSEPAEALTLAHYAERAYLDYAVSVVKGRALPEVADGQKPVQRRILFAMHEMGL 63
Query: 132 RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
R D + VK A++ G V YH HG+QS ++ LAQ+F S L+ G FG+
Sbjct: 64 RADAKPVKSARVVGDVL--GKYHPHGDQSAYDALVRLAQDF--SLRYPLIDGQGNFGS 117
>gi|238063682|ref|ZP_04608391.1| DNA gyrase subunit A gyrA [Micromonospora sp. ATCC 39149]
gi|237885493|gb|EEP74321.1| DNA gyrase subunit A gyrA [Micromonospora sp. ATCC 39149]
Length = 829
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLK---RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMS 162
+ R++P DGLKP R++L++ + R DR VK A++ G V YH HG+ ++
Sbjct: 45 HSRALPDARDGLKPVHRRILYSMHEAGHRPDRAHVKSARVVGDV--MGRYHPHGDTAIYD 102
Query: 163 TIINLAQNFVGSNNINLLQPIGQFGT 188
++ LAQ+F S N+ L+ G FG+
Sbjct: 103 AMVRLAQDF--SLNVPLIDGHGNFGS 126
>gi|386334055|ref|YP_006030226.1| dna topoisomerase iv (subunit a) protein [Ralstonia solanacearum
Po82]
gi|421899344|ref|ZP_16329709.1| dna topoisomerase iv (subunit a) protein [Ralstonia solanacearum
MolK2]
gi|206590550|emb|CAQ37512.1| dna topoisomerase iv (subunit a) protein [Ralstonia solanacearum
MolK2]
gi|334196505|gb|AEG69690.1| dna topoisomerase iv (subunit a) protein [Ralstonia solanacearum
Po82]
Length = 783
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Query: 78 EDYLY--TKTTKAITYTEFVNKELILFS-NMDNERSIPSLCDGLKPGSRKVLFTCLK--- 131
+D L+ ++ +A+T + + + ++ ++ R++P + DG KP R++LF +
Sbjct: 4 QDILFDPSEPAEALTLAHYAERAYLDYAVSVVKGRALPEVADGQKPVQRRILFAMHEMGL 63
Query: 132 RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
R D + VK A++ G V YH HG+QS ++ LAQ+F S L+ G FG+
Sbjct: 64 RADAKPVKSARVVGDVL--GKYHPHGDQSAYDALVRLAQDF--SLRYPLIDGQGNFGS 117
>gi|300704689|ref|YP_003746292.1| DNA topoisomerase iv subunit A [Ralstonia solanacearum CFBP2957]
gi|299072353|emb|CBJ43691.1| DNA topoisomerase IV, subunit A [Ralstonia solanacearum CFBP2957]
Length = 783
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Query: 78 EDYLY--TKTTKAITYTEFVNKELILFS-NMDNERSIPSLCDGLKPGSRKVLFTCLK--- 131
+D L+ ++ +A+T + + + ++ ++ R++P + DG KP R++LF +
Sbjct: 4 QDILFDPSEPAEALTLAHYAERAYLDYAVSVVKGRALPEVADGQKPVQRRILFAMHEMGL 63
Query: 132 RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
R D + VK A++ G V YH HG+QS ++ LAQ+F S L+ G FG+
Sbjct: 64 RADAKPVKSARVVGDVL--GKYHPHGDQSAYDALVRLAQDF--SLRYPLIDGQGNFGS 117
>gi|83745761|ref|ZP_00942818.1| Topoisomerase IV subunit A [Ralstonia solanacearum UW551]
gi|207743675|ref|YP_002260067.1| dna topoisomerase iv (subunit a) protein [Ralstonia solanacearum
IPO1609]
gi|83727451|gb|EAP74572.1| Topoisomerase IV subunit A [Ralstonia solanacearum UW551]
gi|206595074|emb|CAQ62001.1| dna topoisomerase iv (subunit a) protein [Ralstonia solanacearum
IPO1609]
Length = 783
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Query: 78 EDYLY--TKTTKAITYTEFVNKELILFS-NMDNERSIPSLCDGLKPGSRKVLFTCLK--- 131
+D L+ ++ +A+T + + + ++ ++ R++P + DG KP R++LF +
Sbjct: 4 QDILFDPSEPAEALTLAHYAERAYLDYAVSVVKGRALPEVADGQKPVQRRILFAMHEMGL 63
Query: 132 RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
R D + VK A++ G V YH HG+QS ++ LAQ+F S L+ G FG+
Sbjct: 64 RADAKPVKSARVVGDVL--GKYHPHGDQSAYDALVRLAQDF--SLRYPLIDGQGNFGS 117
>gi|110638041|ref|YP_678249.1| DNA topoisomerase IV subunit A [Cytophaga hutchinsonii ATCC 33406]
gi|110280722|gb|ABG58908.1| topoisomerase IV subunit A [Cytophaga hutchinsonii ATCC 33406]
Length = 859
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINL 167
ER++P + DGLKP R++L +D R K+A + GS ++ + HG+ S+ I+N+
Sbjct: 43 ERAVPHINDGLKPVQRRILHAMRVMDDGRFNKIANVIGSTMQY--HPHGDASIGDAIVNM 100
Query: 168 AQNFVGSNNINLLQPIGQFG 187
Q + L++P G +G
Sbjct: 101 GQKDL------LIEPQGNWG 114
>gi|315502966|ref|YP_004081853.1| DNA topoisomerase [Micromonospora sp. L5]
gi|315409585|gb|ADU07702.1| DNA topoisomerase (ATP-hydrolyzing) [Micromonospora sp. L5]
Length = 829
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLK---RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMS 162
+ R++P DGLKP R++L++ + R DR VK A++ G V YH HG+ ++
Sbjct: 45 HSRALPDARDGLKPVHRRILWSMHEQGHRPDRGHVKSARIVGDV--MGKYHPHGDTAIYD 102
Query: 163 TIINLAQNFVGSNNINLLQPIGQFGT 188
++ LAQ+F S N+ L+ G FG+
Sbjct: 103 AMVRLAQDF--SLNVPLIDGHGNFGS 126
>gi|115352446|ref|YP_774285.1| DNA topoisomerase IV subunit A [Burkholderia ambifaria AMMD]
gi|115282434|gb|ABI87951.1| DNA topoisomerase IV subunit A [Burkholderia ambifaria AMMD]
Length = 773
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDG KP R++LF + D + VK A++ G V YH HG+QS +
Sbjct: 41 RALPDVCDGQKPVQRRILFAMNEMGLGPDAKPVKSARVVGDVL--GKYHPHGDQSAYDAL 98
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ LAQ+F S L+ G FG+
Sbjct: 99 VRLAQDF--SLRYPLIDGQGNFGS 120
>gi|172061320|ref|YP_001808972.1| DNA topoisomerase IV subunit A [Burkholderia ambifaria MC40-6]
gi|171993837|gb|ACB64756.1| DNA topoisomerase IV, A subunit [Burkholderia ambifaria MC40-6]
Length = 773
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDG KP R++LF + D + VK A++ G V YH HG+QS +
Sbjct: 41 RALPDVCDGQKPVQRRILFAMNEMGLGPDAKPVKSARVVGDVL--GKYHPHGDQSAYDAL 98
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ LAQ+F S L+ G FG+
Sbjct: 99 VRLAQDF--SLRYPLIDGQGNFGS 120
>gi|78067167|ref|YP_369936.1| DNA topoisomerase IV subunit A [Burkholderia sp. 383]
gi|77967912|gb|ABB09292.1| DNA topoisomerase IV subunit A [Burkholderia sp. 383]
Length = 773
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDG KP R++LF + D + VK A++ G V YH HG+QS +
Sbjct: 41 RALPDVCDGQKPVQRRILFAMNEMGLGPDAKPVKSARVVGDVL--GKYHPHGDQSAYDAL 98
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ LAQ+F S L+ G FG+
Sbjct: 99 VRLAQDF--SLRYPLIDGQGNFGS 120
>gi|94270066|ref|ZP_01291646.1| DNA gyrase/topoisomerase IV, subunit A [delta proteobacterium
MLMS-1]
gi|93450953|gb|EAT01942.1| DNA gyrase/topoisomerase IV, subunit A [delta proteobacterium
MLMS-1]
Length = 662
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINL 167
ER+IP L DGLKP R++L T +D R KVA + G + + HG+ S+ S ++NL
Sbjct: 27 ERAIPDLADGLKPVQRRILQTLHNMDDGRFHKVANVVGETMK--LHPHGDASIFSALVNL 84
Query: 168 AQNFVGSNNINLLQPIGQFG 187
A N L+ G FG
Sbjct: 85 A------NKGYLIDRQGNFG 98
>gi|170733716|ref|YP_001765663.1| DNA topoisomerase IV subunit A [Burkholderia cenocepacia MC0-3]
gi|254247560|ref|ZP_04940881.1| Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A
subunit [Burkholderia cenocepacia PC184]
gi|124872336|gb|EAY64052.1| Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A
subunit [Burkholderia cenocepacia PC184]
gi|169816958|gb|ACA91541.1| DNA topoisomerase IV, A subunit [Burkholderia cenocepacia MC0-3]
Length = 773
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDG KP R++LF + D + VK A++ G V YH HG+QS +
Sbjct: 41 RALPDVCDGQKPVQRRILFAMNEMGLGPDAKPVKSARVVGDVL--GKYHPHGDQSAYDAL 98
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ LAQ+F S L+ G FG+
Sbjct: 99 VRLAQDF--SLRYPLIDGQGNFGS 120
>gi|302866556|ref|YP_003835193.1| DNA topoisomerase [Micromonospora aurantiaca ATCC 27029]
gi|302569415|gb|ADL45617.1| DNA topoisomerase (ATP-hydrolyzing) [Micromonospora aurantiaca ATCC
27029]
Length = 829
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLK---RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMS 162
+ R++P DGLKP R++L++ + R DR VK A++ G V YH HG+ ++
Sbjct: 45 HSRALPDARDGLKPVHRRILWSMHEQGHRPDRGHVKSARIVGDV--MGKYHPHGDTAIYD 102
Query: 163 TIINLAQNFVGSNNINLLQPIGQFGT 188
++ LAQ+F S N+ L+ G FG+
Sbjct: 103 AMVRLAQDF--SLNVPLIDGHGNFGS 126
>gi|206560813|ref|YP_002231578.1| DNA topoisomerase IV subunit A [Burkholderia cenocepacia J2315]
gi|421868055|ref|ZP_16299707.1| Topoisomerase IV subunit A [Burkholderia cenocepacia H111]
gi|444362410|ref|ZP_21162928.1| DNA topoisomerase IV, A subunit [Burkholderia cenocepacia BC7]
gi|444373452|ref|ZP_21172816.1| DNA topoisomerase IV, A subunit [Burkholderia cenocepacia
K56-2Valvano]
gi|198036855|emb|CAR52755.1| topoisomerase IV subunit A [Burkholderia cenocepacia J2315]
gi|358071986|emb|CCE50585.1| Topoisomerase IV subunit A [Burkholderia cenocepacia H111]
gi|443591746|gb|ELT60614.1| DNA topoisomerase IV, A subunit [Burkholderia cenocepacia
K56-2Valvano]
gi|443596824|gb|ELT65301.1| DNA topoisomerase IV, A subunit [Burkholderia cenocepacia BC7]
Length = 773
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDG KP R++LF + D + VK A++ G V YH HG+QS +
Sbjct: 41 RALPDVCDGQKPVQRRILFAMNEMGLGPDAKPVKSARVVGDVL--GKYHPHGDQSAYDAL 98
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ LAQ+F S L+ G FG+
Sbjct: 99 VRLAQDF--SLRYPLIDGQGNFGS 120
>gi|171317649|ref|ZP_02906834.1| DNA topoisomerase IV, A subunit [Burkholderia ambifaria MEX-5]
gi|171097177|gb|EDT42027.1| DNA topoisomerase IV, A subunit [Burkholderia ambifaria MEX-5]
Length = 777
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDG KP R++LF + D + VK A++ G V YH HG+QS +
Sbjct: 41 RALPDVCDGQKPVQRRILFAMNEMGLGPDAKPVKSARVVGDVL--GKYHPHGDQSAYDAL 98
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ LAQ+F S L+ G FG+
Sbjct: 99 VRLAQDF--SLRYPLIDGQGNFGS 120
>gi|383771706|ref|YP_005450771.1| DNA gyrase subunit A [Bradyrhizobium sp. S23321]
gi|381359829|dbj|BAL76659.1| DNA gyrase subunit A [Bradyrhizobium sp. S23321]
Length = 915
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P DGLKP R++L++ ++ D++ VK A++ G V YH HG+QS+ +
Sbjct: 42 RALPDARDGLKPVHRRILYSMHEQGHTPDKKYVKSARVVGDVI--GKYHPHGDQSIYDAM 99
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ+F S + L+ G FG+
Sbjct: 100 VRMAQDF--SMRVPLIDGQGNFGSV 122
>gi|170700643|ref|ZP_02891641.1| DNA topoisomerase IV, A subunit [Burkholderia ambifaria IOP40-10]
gi|170134462|gb|EDT02792.1| DNA topoisomerase IV, A subunit [Burkholderia ambifaria IOP40-10]
Length = 773
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDG KP R++LF + D + VK A++ G V YH HG+QS +
Sbjct: 41 RALPDVCDGQKPVQRRILFAMNEMGLGPDAKPVKSARVVGDVL--GKYHPHGDQSAYDAL 98
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ LAQ+F S L+ G FG+
Sbjct: 99 VRLAQDF--SLRYPLIDGQGNFGS 120
>gi|107023296|ref|YP_621623.1| DNA topoisomerase IV subunit A [Burkholderia cenocepacia AU 1054]
gi|116690379|ref|YP_836002.1| DNA topoisomerase IV subunit A [Burkholderia cenocepacia HI2424]
gi|105893485|gb|ABF76650.1| DNA topoisomerase IV subunit A [Burkholderia cenocepacia AU 1054]
gi|116648468|gb|ABK09109.1| DNA topoisomerase IV subunit A [Burkholderia cenocepacia HI2424]
Length = 773
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDG KP R++LF + D + VK A++ G V YH HG+QS +
Sbjct: 41 RALPDVCDGQKPVQRRILFAMNEMGLGPDAKPVKSARVVGDVL--GKYHPHGDQSAYDAL 98
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ LAQ+F S L+ G FG+
Sbjct: 99 VRLAQDF--SLRYPLIDGQGNFGS 120
>gi|330998783|ref|ZP_08322511.1| DNA topoisomerase IV, A subunit [Parasutterella excrementihominis
YIT 11859]
gi|329576280|gb|EGG57796.1| DNA topoisomerase IV, A subunit [Parasutterella excrementihominis
YIT 11859]
Length = 939
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 10/85 (11%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKR----NDRREVKVAQLAGSVAEHSAYH-HGEQSLMST 163
R++P +CDG+KP R++L+ +KR D + VK A++ G V YH HG+ +
Sbjct: 191 RALPDVCDGMKPVQRRILY-AMKRLGLNPDVKTVKSARVVGEVL--GKYHPHGDSAAYDA 247
Query: 164 IINLAQNFVGSNNINLLQPIGQFGT 188
++ LAQ+F + L+Q G FG+
Sbjct: 248 MVRLAQDF--TMRYPLVQGQGNFGS 270
>gi|188584270|ref|YP_001927715.1| DNA gyrase subunit A [Methylobacterium populi BJ001]
gi|179347768|gb|ACB83180.1| DNA gyrase, A subunit [Methylobacterium populi BJ001]
Length = 908
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P DGLKP R++L++ + +R+ VK A++ G V YH HG+QS+ +
Sbjct: 43 RALPDARDGLKPVHRRILYSAFESGHLPERKYVKSARIVGDVIGQ--YHPHGDQSIYDAL 100
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ+F S + L+ G FG+
Sbjct: 101 VRMAQDF--SMRLMLIDGQGNFGSV 123
>gi|189502210|ref|YP_001957927.1| DNA topoisomerase IV subunit A [Candidatus Amoebophilus asiaticus
5a2]
gi|189497651|gb|ACE06198.1| hypothetical protein Aasi_0825 [Candidatus Amoebophilus asiaticus
5a2]
Length = 832
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINL 167
ER++P++ DGLKP R++L + +D R KVA + G ++ + HG+ S+ IINL
Sbjct: 36 ERAVPAIEDGLKPVQRRILHAMKEMDDGRYNKVANIIGQTMQY--HPHGDASIAEAIINL 93
Query: 168 AQ 169
Q
Sbjct: 94 GQ 95
>gi|167569284|ref|ZP_02362158.1| DNA topoisomerase IV subunit A [Burkholderia oklahomensis C6786]
Length = 776
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKR---NDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDG KP R++LF + N+ + VK A++ G V YH HG+QS +
Sbjct: 41 RALPDVCDGQKPVQRRILFAMNEMGLGNNAKPVKSARVVGDVL--GKYHPHGDQSAYDAL 98
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ LAQ+F S L+ G FG+
Sbjct: 99 VRLAQDF--SMRYPLIDGQGNFGS 120
>gi|167585849|ref|ZP_02378237.1| DNA topoisomerase IV, A subunit [Burkholderia ubonensis Bu]
Length = 712
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDG KP R++LF + D + VK A++ G V YH HG+QS +
Sbjct: 41 RALPDVCDGQKPVQRRILFAMNEMGLGPDAKPVKSARVVGDVL--GKYHPHGDQSAYDAL 98
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ LAQ+F S L+ G FG+
Sbjct: 99 VRLAQDF--SLRYPLIDGQGNFGS 120
>gi|167562026|ref|ZP_02354942.1| DNA topoisomerase IV subunit A [Burkholderia oklahomensis EO147]
Length = 776
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKR---NDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDG KP R++LF + N+ + VK A++ G V YH HG+QS +
Sbjct: 41 RALPDVCDGQKPVQRRILFAMNEMGLGNNAKPVKSARVVGDVL--GKYHPHGDQSAYDAL 98
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ LAQ+F S L+ G FG+
Sbjct: 99 VRLAQDF--SMRYPLIDGQGNFGS 120
>gi|402565844|ref|YP_006615189.1| DNA topoisomerase IV subunit A [Burkholderia cepacia GG4]
gi|402247041|gb|AFQ47495.1| DNA topoisomerase IV subunit A [Burkholderia cepacia GG4]
Length = 773
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDG KP R++LF + D + VK A++ G V YH HG+QS +
Sbjct: 41 RALPDVCDGQKPVQRRILFAMNEMGLGPDAKPVKSARVVGDVL--GKYHPHGDQSAYDAL 98
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ LAQ+F S L+ G FG+
Sbjct: 99 VRLAQDF--SLRYPLIDGQGNFGS 120
>gi|197104862|ref|YP_002130239.1| DNA gyrase subunit A [Phenylobacterium zucineum HLK1]
gi|196478282|gb|ACG77810.1| DNA gyrase subunit A [Phenylobacterium zucineum HLK1]
Length = 932
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R++LF+ ++ DR VK A++ G V YH HG+ ++ T+
Sbjct: 40 RALPDVRDGLKPVHRRILFSMNEQGHTPDRGYVKSARVVGDV--MGKYHPHGDVAIYDTM 97
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ F S N+ L+ G FG+
Sbjct: 98 VRMAQPF--SMNLLLIDGQGNFGSV 120
>gi|94264176|ref|ZP_01287973.1| DNA gyrase/topoisomerase IV, subunit A [delta proteobacterium
MLMS-1]
gi|93455434|gb|EAT05632.1| DNA gyrase/topoisomerase IV, subunit A [delta proteobacterium
MLMS-1]
Length = 711
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINL 167
ER+IP L DGLKP R++L T +D R KVA + G + + HG+ S+ S ++NL
Sbjct: 76 ERAIPDLADGLKPVQRRILQTLHNMDDGRFHKVANVVGETMK--LHPHGDASIFSALVNL 133
Query: 168 AQNFVGSNNINLLQPIGQFG 187
A N L+ G FG
Sbjct: 134 A------NKGYLIDRQGNFG 147
>gi|161511097|ref|NP_771336.2| DNA gyrase subunit A [Bradyrhizobium japonicum USDA 110]
Length = 909
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P DGLKP R++L++ ++ D++ VK A++ G V YH HG+QS+ +
Sbjct: 41 RALPDARDGLKPVHRRILYSMNEQGHTPDKKYVKSARVVGDVI--GKYHPHGDQSIYDAM 98
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ+F S + L+ G FG+
Sbjct: 99 VRMAQDF--SMRVPLIDGQGNFGSV 121
>gi|398820048|ref|ZP_10578588.1| DNA gyrase, A subunit [Bradyrhizobium sp. YR681]
gi|398229306|gb|EJN15388.1| DNA gyrase, A subunit [Bradyrhizobium sp. YR681]
Length = 913
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P DGLKP R++L++ ++ D++ VK A++ G V YH HG+QS+ +
Sbjct: 41 RALPDARDGLKPVHRRILYSMNEQGHTPDKKYVKSARVVGDVI--GKYHPHGDQSIYDAM 98
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ+F S + L+ G FG+
Sbjct: 99 VRMAQDF--SMRVPLIDGQGNFGSV 121
>gi|170748569|ref|YP_001754829.1| DNA gyrase subunit A [Methylobacterium radiotolerans JCM 2831]
gi|170655091|gb|ACB24146.1| DNA gyrase, A subunit [Methylobacterium radiotolerans JCM 2831]
Length = 910
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P DGLKP R++L++ + +R+ VK A++ G V YH HG+QS+ +
Sbjct: 40 RALPDARDGLKPVHRRILYSAFESGHLPERKYVKSARIVGDVI--GLYHPHGDQSIYDAL 97
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ+F S + L+ G FG+
Sbjct: 98 VRMAQDF--SMRLMLIDGQGNFGSV 120
>gi|374575666|ref|ZP_09648762.1| DNA gyrase, A subunit [Bradyrhizobium sp. WSM471]
gi|374423987|gb|EHR03520.1| DNA gyrase, A subunit [Bradyrhizobium sp. WSM471]
Length = 914
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P DGLKP R++L++ ++ D++ VK A++ G V YH HG+QS+ +
Sbjct: 42 RALPDARDGLKPVHRRILYSMNEQGHTPDKKYVKSARVVGDVI--GKYHPHGDQSIYDAM 99
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ+F S + L+ G FG+
Sbjct: 100 VRMAQDF--SMRVPLIDGQGNFGSV 122
>gi|384218711|ref|YP_005609877.1| DNA gyrase subunit A [Bradyrhizobium japonicum USDA 6]
gi|354957610|dbj|BAL10289.1| DNA gyrase subunit A [Bradyrhizobium japonicum USDA 6]
Length = 914
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P DGLKP R++L++ ++ D++ VK A++ G V YH HG+QS+ +
Sbjct: 42 RALPDARDGLKPVHRRILYSMNEQGHTPDKKYVKSARVVGDVI--GKYHPHGDQSIYDAM 99
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ+F S + L+ G FG+
Sbjct: 100 VRMAQDF--SMRVPLIDGQGNFGSV 122
>gi|27352960|dbj|BAC49961.1| DNA gyrase subunit A [Bradyrhizobium japonicum USDA 110]
Length = 884
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P DGLKP R++L++ ++ D++ VK A++ G V YH HG+QS+ +
Sbjct: 16 RALPDARDGLKPVHRRILYSMNEQGHTPDKKYVKSARVVGDVI--GKYHPHGDQSIYDAM 73
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ+F S + L+ G FG+
Sbjct: 74 VRMAQDF--SMRVPLIDGQGNFGSV 96
>gi|386395140|ref|ZP_10079918.1| DNA gyrase, A subunit [Bradyrhizobium sp. WSM1253]
gi|385735766|gb|EIG55962.1| DNA gyrase, A subunit [Bradyrhizobium sp. WSM1253]
Length = 914
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P DGLKP R++L++ ++ D++ VK A++ G V YH HG+QS+ +
Sbjct: 42 RALPDARDGLKPVHRRILYSMNEQGHTPDKKYVKSARVVGDVI--GKYHPHGDQSIYDAM 99
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ+F S + L+ G FG+
Sbjct: 100 VRMAQDF--SMRVPLIDGQGNFGSV 122
>gi|386389517|ref|ZP_10074331.1| DNA gyrase, A subunit [Haemophilus paraphrohaemolyticus HK411]
gi|385695287|gb|EIG25849.1| DNA gyrase, A subunit [Haemophilus paraphrohaemolyticus HK411]
Length = 884
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R+VLF+ + N +R VK A++ G V YH HG+ ++ TI
Sbjct: 32 RALPDVRDGLKPVHRRVLFSMDQNNNTYNRPHVKSARVVGDVI--GKYHPHGDSAVYDTI 89
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ F S L+ G FG+
Sbjct: 90 VRMAQPF--SLRYMLVDGQGNFGSI 112
>gi|393767158|ref|ZP_10355709.1| DNA gyrase subunit A [Methylobacterium sp. GXF4]
gi|392727421|gb|EIZ84735.1| DNA gyrase subunit A [Methylobacterium sp. GXF4]
Length = 916
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P DGLKP R++L++ + +R+ VK A++ G V YH HG+QS+ +
Sbjct: 40 RALPDARDGLKPVHRRILYSAFESGHLPERKYVKSARIVGDVI--GLYHPHGDQSIYDAL 97
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ+F S + L+ G FG+
Sbjct: 98 VRMAQDF--SMRLMLIDGQGNFGSV 120
>gi|297568941|ref|YP_003690285.1| DNA topoisomerase (ATP-hydrolyzing) [Desulfurivibrio alkaliphilus
AHT2]
gi|296924856|gb|ADH85666.1| DNA topoisomerase (ATP-hydrolyzing) [Desulfurivibrio alkaliphilus
AHT2]
Length = 660
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINL 167
ER+IP L DGLKP R++L T +D R KVA + G + + HG+ S+ S ++NL
Sbjct: 27 ERAIPDLADGLKPVQRRILQTLHNVDDGRFHKVANVVGETMK--LHPHGDASIFSALVNL 84
Query: 168 AQNFVGSNNINLLQPIGQFG 187
A N L+ G FG
Sbjct: 85 A------NKGYLVDRQGNFG 98
>gi|240142252|ref|YP_002966762.1| DNA gyrase subunit A [Methylobacterium extorquens AM1]
gi|418059322|ref|ZP_12697274.1| DNA gyrase, A subunit [Methylobacterium extorquens DSM 13060]
gi|240012196|gb|ACS43421.1| DNA gyrase subunit A [Methylobacterium extorquens AM1]
gi|373567146|gb|EHP93123.1| DNA gyrase, A subunit [Methylobacterium extorquens DSM 13060]
Length = 894
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DG+KP R+++F+ + N DR+ VK A++ G V YH HG+ ++ +
Sbjct: 42 RALPDVRDGMKPVHRRIMFSMAESNFTADRKHVKSAKVVGDV--MGQYHPHGDTAIYDAM 99
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ + Q++ S L+ P G FG+
Sbjct: 100 VRMGQHW--SLRYPLIDPQGNFGSI 122
>gi|451823141|ref|YP_007459415.1| DNA gyrase subunit A [Candidatus Kinetoplastibacterium desouzaii
TCC079E]
gi|451775941|gb|AGF46982.1| DNA gyrase subunit A [Candidatus Kinetoplastibacterium desouzaii
TCC079E]
Length = 865
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLK-RND--RREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R+VLF + ND R K A++ G V YH HG+QS+ TI
Sbjct: 32 RALPDVRDGLKPVHRRVLFAMHELHNDWNRAYKKSARIVGDVI--GKYHPHGDQSVYDTI 89
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ LAQ+F S L+ G FG+
Sbjct: 90 VRLAQDF--SMRYMLIDGQGNFGSI 112
>gi|413963186|ref|ZP_11402413.1| DNA topoisomerase IV subunit A [Burkholderia sp. SJ98]
gi|413929018|gb|EKS68306.1| DNA topoisomerase IV subunit A [Burkholderia sp. SJ98]
Length = 772
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 12/123 (9%)
Query: 74 MGIGEDYLYTKTT---KAITYTEFVNKELILFS-NMDNERSIPSLCDGLKPGSRKVLFTC 129
MGI +D +T + +T ++ + + ++ ++ R++P +CDG KP R++L+
Sbjct: 1 MGITDDLFAEQTAPDGEQLTLGDYAERAYLDYAVSVVKGRALPDVCDGQKPVQRRILYAM 60
Query: 130 LKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTIINLAQNFVGSNNINLLQPIGQ 185
+ + + VK A++ G V YH HG+QS ++ LAQ+F S L+ G
Sbjct: 61 SEMGLAANAKPVKSARVVGDVL--GKYHPHGDQSAYDALVRLAQDF--SMRYPLIDGQGN 116
Query: 186 FGT 188
FG+
Sbjct: 117 FGS 119
>gi|225552441|ref|ZP_03773381.1| DNA gyrase, A subunit [Borrelia sp. SV1]
gi|225371439|gb|EEH00869.1| DNA gyrase, A subunit [Borrelia sp. SV1]
Length = 810
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLK---RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R++L++ + R+D+ K ++ G V YH HG+QS+ +
Sbjct: 34 RALPDVRDGLKPVHRRILYSMYEMGLRSDKAFKKAGRIVGDVL--GKYHPHGDQSIYDAL 91
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ LAQNF S +++ G FG+
Sbjct: 92 VRLAQNF--SLRYPVIRGQGNFGSI 114
>gi|404483765|ref|ZP_11018982.1| DNA gyrase, A subunit [Clostridiales bacterium OBRC5-5]
gi|404343124|gb|EJZ69491.1| DNA gyrase, A subunit [Clostridiales bacterium OBRC5-5]
Length = 824
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R+VLF+ ++ N D+ K A++ G YH HG+ S+ ++
Sbjct: 33 RALPDIRDGLKPVQRRVLFSMIELNNGPDKPHRKCARIVGDTM--GKYHPHGDSSIYGSL 90
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+N+AQ++ S L+ G FG+
Sbjct: 91 VNMAQDW--SMRYPLVDGHGNFGSV 113
>gi|330444050|ref|YP_004377036.1| DNA gyrase/topoisomerase IV subunit A [Chlamydophila pecorum E58]
gi|328807160|gb|AEB41333.1| DNA gyrase/topoisomerase IV, A subunit [Chlamydophila pecorum E58]
Length = 474
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 10/84 (11%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTIIN 166
ER+IP + DGLKP R++L+T + +D + KVA +AG A+H HG+ +++ ++
Sbjct: 22 ERAIPHVLDGLKPVQRRLLWTLFRMDDGKMHKVANIAGRTM---AFHPHGDAAIIEALVV 78
Query: 167 LAQNFVGSNNINLLQPIGQFGTFL 190
LA N L++ G FG L
Sbjct: 79 LA------NKGYLIETQGNFGNPL 96
>gi|17545697|ref|NP_519099.1| DNA topoisomerase IV subunit A [Ralstonia solanacearum GMI1000]
gi|17427991|emb|CAD14680.1| probable dna topoisomerase iv (subunit a) protein [Ralstonia
solanacearum GMI1000]
Length = 781
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 11/118 (9%)
Query: 78 EDYLYT--KTTKAITYTEFVNKELILFS-NMDNERSIPSLCDGLKPGSRKVLFTCLK--- 131
+D L+ + +A+T + + + ++ ++ R++P + DG KP R++LF +
Sbjct: 4 QDILFDPREPAEALTLAHYAERAYLDYAVSVVKGRALPEVADGQKPVQRRILFAMHEMGL 63
Query: 132 RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
R D + VK A++ G V YH HG+QS ++ LAQ+F S L+ G FG+
Sbjct: 64 RADAKPVKSARVVGDVL--GKYHPHGDQSAYDALVRLAQDF--SLRYPLIDGQGNFGS 117
>gi|402311445|ref|ZP_10830388.1| DNA gyrase, A subunit [Lachnospiraceae bacterium ICM7]
gi|400372300|gb|EJP25245.1| DNA gyrase, A subunit [Lachnospiraceae bacterium ICM7]
Length = 807
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R+VLF+ ++ N D+ K A++ G YH HG+ S+ ++
Sbjct: 16 RALPDIRDGLKPVQRRVLFSMIELNNGPDKPHRKCARIVGDTM--GKYHPHGDSSIYGSL 73
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+N+AQ++ S L+ G FG+
Sbjct: 74 VNMAQDW--SMRYPLVDGHGNFGSV 96
>gi|299066934|emb|CBJ38129.1| DNA topoisomerase IV, subunit A [Ralstonia solanacearum CMR15]
Length = 781
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 11/118 (9%)
Query: 78 EDYLYT--KTTKAITYTEFVNKELILFS-NMDNERSIPSLCDGLKPGSRKVLFTCLK--- 131
+D L+ + +A+T + + + ++ ++ R++P + DG KP R++LF +
Sbjct: 4 QDILFDPREPAEALTLAHYAERAYLDYAVSVVKGRALPEVADGQKPVQRRILFAMHEMGL 63
Query: 132 RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
R D + VK A++ G V YH HG+QS ++ LAQ+F S L+ G FG+
Sbjct: 64 RADAKPVKSARVVGDVL--GKYHPHGDQSAYDALVRLAQDF--SLRYPLIDGQGNFGS 117
>gi|357061182|ref|ZP_09121941.1| hypothetical protein HMPREF9332_01498 [Alloprevotella rava F0323]
gi|355374691|gb|EHG21983.1| hypothetical protein HMPREF9332_01498 [Alloprevotella rava F0323]
Length = 907
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINL 167
ER++P L DGLKP R++L + +D R KVA L G + HG+QS+ ++ L
Sbjct: 50 ERAVPHLADGLKPVQRRILHAMKRADDGRYNKVAGLVGDTMHF--HPHGDQSIGGALVQL 107
Query: 168 AQ 169
Q
Sbjct: 108 GQ 109
>gi|429462686|ref|YP_007184149.1| DNA gyrase subunit A [Candidatus Kinetoplastibacterium crithidii
(ex Angomonas deanei ATCC 30255)]
gi|451811559|ref|YP_007448014.1| DNA gyrase subunit A [Candidatus Kinetoplastibacterium crithidii
TCC036E]
gi|429338200|gb|AFZ82623.1| DNA gyrase subunit A [Candidatus Kinetoplastibacterium crithidii
(ex Angomonas deanei ATCC 30255)]
gi|451776717|gb|AGF47716.1| DNA gyrase subunit A [Candidatus Kinetoplastibacterium crithidii
TCC036E]
Length = 866
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R+VLF + N +R K A++ G V YH HG+QS+ TI
Sbjct: 32 RALPDVRDGLKPVHRRVLFAMHELNNDWNRAYKKSARIVGDVI--GKYHPHGDQSVYDTI 89
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ +AQ+F S L+ G FG+
Sbjct: 90 VRMAQDF--SMRYVLVDGQGNFGS 111
>gi|182679031|ref|YP_001833177.1| DNA gyrase subunit A [Beijerinckia indica subsp. indica ATCC 9039]
gi|182634914|gb|ACB95688.1| DNA gyrase, A subunit [Beijerinckia indica subsp. indica ATCC 9039]
Length = 929
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R++LF+ + N DR VK A++ G V YH HG+ ++ +
Sbjct: 40 RALPDVRDGLKPVHRRILFSMHENNHTPDRPYVKSARIVGDV--MGKYHPHGDTAIYDAL 97
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ F S + L+ G FG+
Sbjct: 98 VRMAQGF--SMRLPLIDGQGNFGSV 120
>gi|338176040|ref|YP_004652850.1| DNA topoisomerase 4 subunit A [Parachlamydia acanthamoebae UV-7]
gi|336480398|emb|CCB86996.1| DNA topoisomerase 4 subunit A [Parachlamydia acanthamoebae UV-7]
Length = 638
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTIIN 166
+R+IP + DGLKP R++L T +D + KVA +AG AYH HG+ + ++N
Sbjct: 22 DRAIPHVIDGLKPVQRRILHTLWSMDDGKLHKVANVAGQTM---AYHPHGDAPITEALVN 78
Query: 167 LAQNFVGSNNINLLQPIGQFG 187
+A N LL G FG
Sbjct: 79 MA------NRGYLLDQQGNFG 93
>gi|398833820|ref|ZP_10591941.1| DNA gyrase, A subunit [Herbaspirillum sp. YR522]
gi|398220879|gb|EJN07314.1| DNA gyrase, A subunit [Herbaspirillum sp. YR522]
Length = 887
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 9/113 (7%)
Query: 82 YTKTTKAITYTEFVNKELILFS-NMDNERSIPSLCDGLKPGSRKVLFTCLKRN---DRRE 137
+ K T I+ E + K + ++ ++ R++P + DGLKP R+VLF + N +R
Sbjct: 4 FAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNVWNRPF 63
Query: 138 VKVAQLAGSVAEHSAYH-HGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTF 189
VK A++ G V YH HG+ S+ T++ +AQ+F S L+ G FG+
Sbjct: 64 VKCARVVGEV--MGKYHPHGDASIYDTLVRMAQDF--SLRYTLVDGQGNFGSV 112
>gi|296134958|ref|YP_003642200.1| DNA topoisomerase IV subunit A [Thiomonas intermedia K12]
gi|295795080|gb|ADG29870.1| DNA topoisomerase IV, A subunit [Thiomonas intermedia K12]
Length = 777
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDGLKP R++L+ + D + VK A++ G V +H HG+Q+ +
Sbjct: 41 RALPDVCDGLKPVQRRILYAMWRMGLTADAKPVKSARVVGDVLGR--FHPHGDQAAYDAL 98
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ L+Q+F + L+ G FG+
Sbjct: 99 VRLSQDF--AQRYPLIDGQGNFGS 120
>gi|149199674|ref|ZP_01876706.1| DNA topoisomerase IV subunit A [Lentisphaera araneosa HTCC2155]
gi|149137191|gb|EDM25612.1| DNA topoisomerase IV subunit A [Lentisphaera araneosa HTCC2155]
Length = 808
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTIIN 166
+R+IP + DGLKP R++L T K +D + KVA + G+ AYH HG+ S+ ++
Sbjct: 51 DRAIPDVDDGLKPVQRRILHTLFKADDGKFHKVANIVGACM---AYHPHGDSSIYGALVT 107
Query: 167 LAQNFVGSNNINLLQPIGQFGTFL 190
+A N ++ G FG L
Sbjct: 108 VA------NKEYFIEKQGNFGNIL 125
>gi|326536573|ref|YP_004301004.1| gp52 topoisomerase II medium subunit [Aeromonas phage 65]
gi|312262919|gb|ADQ53175.1| gp52 topoisomerase II medium subunit [Aeromonas phage 65]
Length = 450
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLA 168
R++PSL DGLKP R VL++ +K K A L G ++++ Y HGE S +A
Sbjct: 27 RALPSLIDGLKPSQRFVLYSAIKTCQCGFKKNAYLCGVLSDY-GYPHGETSAFDVASKMA 85
Query: 169 QNFVGSNNINLLQPIGQFGT 188
+ +NN +L+ G FG+
Sbjct: 86 TEY--ANNYPVLEGRGNFGS 103
>gi|187927926|ref|YP_001898413.1| DNA topoisomerase IV subunit A [Ralstonia pickettii 12J]
gi|187724816|gb|ACD25981.1| DNA topoisomerase IV, A subunit [Ralstonia pickettii 12J]
Length = 780
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 78 EDYLY--TKTTKAITYTEFVNKELILFS-NMDNERSIPSLCDGLKPGSRKVLFTCLK--- 131
+D L+ ++ +A+T + + + ++ ++ R++P + DG KP R++LF +
Sbjct: 4 QDILFDPSEPAEALTLGAYAERAYLDYAISVVKGRALPEVADGQKPVQRRILFAMHEMGL 63
Query: 132 RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
R+D + VK A++ G V +H HG+QS ++ LAQ+F S L+ G FG+
Sbjct: 64 RSDAKPVKSARVVGDVL--GKFHPHGDQSAYDALVRLAQDF--SLRYPLIDGQGNFGS 117
>gi|387772167|ref|ZP_10128126.1| DNA gyrase, A subunit [Haemophilus parahaemolyticus HK385]
gi|386907812|gb|EIJ72514.1| DNA gyrase, A subunit [Haemophilus parahaemolyticus HK385]
Length = 895
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 10/86 (11%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN----DRREVKVAQLAGSVAEHSAYH-HGEQSLMST 163
R++P + DGLKP R+VLF+ + RN +R VK A++ G V YH HG+ ++ T
Sbjct: 32 RALPDVRDGLKPVHRRVLFS-MDRNSNTFNRPHVKSARVVGDVI--GKYHPHGDSAVYDT 88
Query: 164 IINLAQNFVGSNNINLLQPIGQFGTF 189
I+ +AQ F S L+ G FG+
Sbjct: 89 IVRMAQPF--SLRYMLVDGQGNFGSI 112
>gi|320353625|ref|YP_004194964.1| DNA topoisomerase IV subunit A [Desulfobulbus propionicus DSM 2032]
gi|320122127|gb|ADW17673.1| DNA topoisomerase IV subunit A [Desulfobulbus propionicus DSM 2032]
Length = 670
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINL 167
ER+IP + DGLKP R++L T +D R KVA + G + + HG+QS+ ++NL
Sbjct: 30 ERAIPDVDDGLKPVQRRILQTLANMDDGRFHKVANVVGETMK--LHPHGDQSIFDALVNL 87
Query: 168 AQNFVGSNNINLLQPIGQFGTFL 190
A N L+ G FG
Sbjct: 88 A------NKGYLIDRQGNFGNIF 104
>gi|225377590|ref|ZP_03754811.1| hypothetical protein ROSEINA2194_03240 [Roseburia inulinivorans DSM
16841]
gi|225210566|gb|EEG92920.1| hypothetical protein ROSEINA2194_03240 [Roseburia inulinivorans DSM
16841]
Length = 871
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMST 163
+R++P + DGLKP R+VL++ ++ N D+ K A++ G YH HG+ S+
Sbjct: 32 QRALPDVRDGLKPVQRRVLYSMIELNNGPDKPHRKCARIVGDTM--GKYHPHGDSSIYGA 89
Query: 164 IINLAQNFVGSNNINLLQPIGQFGTF 189
++N+AQ++ S L+ G FG+
Sbjct: 90 LVNMAQDW--STRYPLVDGHGNFGSV 113
>gi|373470587|ref|ZP_09561708.1| DNA gyrase, A subunit [Lachnospiraceae bacterium oral taxon 082
str. F0431]
gi|371762233|gb|EHO50781.1| DNA gyrase, A subunit [Lachnospiraceae bacterium oral taxon 082
str. F0431]
Length = 824
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R+VLF+ ++ N D+ K A++ G YH HG+ S+ +
Sbjct: 33 RALPDVRDGLKPVQRRVLFSMIELNNGPDKPHRKCARIVGDTM--GKYHPHGDSSIYGAL 90
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+N+AQ++ S L+ G FG+
Sbjct: 91 VNMAQDW--SMRYTLVDGHGNFGSV 113
>gi|303257798|ref|ZP_07343808.1| DNA topoisomerase IV, A subunit [Burkholderiales bacterium 1_1_47]
gi|302859401|gb|EFL82482.1| DNA topoisomerase IV, A subunit [Burkholderiales bacterium 1_1_47]
Length = 813
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 10/85 (11%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKR----NDRREVKVAQLAGSVAEHSAYH-HGEQSLMST 163
R++P +CDG+KP R++L+ +KR D + VK A++ G V YH HG+ +
Sbjct: 65 RALPDVCDGMKPVQRRILY-AMKRLGLNPDVKTVKSARVVGEVL--GKYHPHGDLAAYDA 121
Query: 164 IINLAQNFVGSNNINLLQPIGQFGT 188
++ LAQ+F + L+Q G FG+
Sbjct: 122 MVRLAQDF--TMRYPLVQGQGNFGS 144
>gi|325954945|ref|YP_004238605.1| DNA topoisomerase [Weeksella virosa DSM 16922]
gi|323437563|gb|ADX68027.1| DNA topoisomerase (ATP-hydrolyzing) [Weeksella virosa DSM 16922]
Length = 847
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINL 167
ER+IPS+ DGLKP R++L + + D R KVA + G+ ++ + HG+ S+ I+ +
Sbjct: 30 ERAIPSIYDGLKPVQRRILHSMRELEDGRYNKVANIVGNTMKY--HPHGDASITDAIVQI 87
Query: 168 AQ 169
Q
Sbjct: 88 GQ 89
>gi|309781097|ref|ZP_07675835.1| DNA topoisomerase IV, A subunit [Ralstonia sp. 5_7_47FAA]
gi|404393990|ref|ZP_10985794.1| DNA topoisomerase IV, A subunit [Ralstonia sp. 5_2_56FAA]
gi|308920163|gb|EFP65822.1| DNA topoisomerase IV, A subunit [Ralstonia sp. 5_7_47FAA]
gi|348614324|gb|EGY63876.1| DNA topoisomerase IV, A subunit [Ralstonia sp. 5_2_56FAA]
Length = 780
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 78 EDYLY--TKTTKAITYTEFVNKELILFS-NMDNERSIPSLCDGLKPGSRKVLFTCLK--- 131
+D L+ ++ +A+T + + + ++ ++ R++P + DG KP R++LF +
Sbjct: 4 QDILFDPSEPAEALTLGAYAERAYLDYAISVVKGRALPEVADGQKPVQRRILFAMHEMGL 63
Query: 132 RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
R+D + VK A++ G V +H HG+QS ++ LAQ+F S L+ G FG+
Sbjct: 64 RSDAKPVKSARVVGDVL--GKFHPHGDQSAYDALVRLAQDF--SLRYPLIDGQGNFGS 117
>gi|238028238|ref|YP_002912469.1| DNA topoisomerase IV subunit A [Burkholderia glumae BGR1]
gi|237877432|gb|ACR29765.1| DNA topoisomerase IV subunit A [Burkholderia glumae BGR1]
Length = 774
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKR---NDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDG KP R++L+ + N+ + VK A++ G V YH HG+QS +
Sbjct: 43 RALPDVCDGQKPVQRRILYAMNEMGLGNNAKPVKSARVVGDVL--GKYHPHGDQSAYDAL 100
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ LAQ+F S L+ G FG+
Sbjct: 101 VRLAQDF--SMRYPLIDGQGNFGS 122
>gi|390572812|ref|ZP_10253006.1| DNA topoisomerase IV subunit A [Burkholderia terrae BS001]
gi|389935197|gb|EIM97131.1| DNA topoisomerase IV subunit A [Burkholderia terrae BS001]
Length = 773
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLK---RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDG KP R++LF + ++ + VK A++ G V YH HG+QS +
Sbjct: 41 RALPDVCDGQKPVQRRILFAMNEMGLADNAKPVKSARVVGDVL--GKYHPHGDQSAYDAL 98
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ LAQ+F S L+ G FG+
Sbjct: 99 VRLAQDF--SMRYPLIDGQGNFGS 120
>gi|419719380|ref|ZP_14246663.1| DNA gyrase, A subunit [Lachnoanaerobaculum saburreum F0468]
gi|383304493|gb|EIC95895.1| DNA gyrase, A subunit [Lachnoanaerobaculum saburreum F0468]
Length = 824
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R+VLF+ ++ N D+ K A++ G YH HG+ S+ +
Sbjct: 33 RALPDVRDGLKPVQRRVLFSMIELNNGPDKPHRKCARIVGDTM--GKYHPHGDSSIYGAL 90
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+N+AQ++ S L+ G FG+
Sbjct: 91 VNMAQDW--SMRYTLVDGHGNFGSV 113
>gi|315650186|ref|ZP_07903261.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Lachnoanaerobaculum
saburreum DSM 3986]
gi|315487543|gb|EFU77851.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Lachnoanaerobaculum
saburreum DSM 3986]
Length = 824
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R+VLF+ ++ N D+ K A++ G YH HG+ S+ +
Sbjct: 33 RALPDVRDGLKPVQRRVLFSMIELNNGPDKPHRKCARIVGDTM--GKYHPHGDSSIYGAL 90
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+N+AQ++ S L+ G FG+
Sbjct: 91 VNMAQDW--SMRYTLVDGHGNFGSV 113
>gi|241662515|ref|YP_002980875.1| DNA topoisomerase IV subunit A [Ralstonia pickettii 12D]
gi|240864542|gb|ACS62203.1| DNA topoisomerase IV, A subunit [Ralstonia pickettii 12D]
Length = 780
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 78 EDYLY--TKTTKAITYTEFVNKELILFS-NMDNERSIPSLCDGLKPGSRKVLFTCLK--- 131
+D L+ ++ +A+T + + + ++ ++ R++P + DG KP R++LF +
Sbjct: 4 QDILFDPSEPAEALTLGAYAERAYLDYAISVVKGRALPEVADGQKPVQRRILFAMHEMGL 63
Query: 132 RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
R+D + VK A++ G V +H HG+QS ++ LAQ+F S L+ G FG+
Sbjct: 64 RSDAKPVKSARVVGDVL--GKFHPHGDQSAYDALVRLAQDF--SLRYPLIDGQGNFGS 117
>gi|227872281|ref|ZP_03990640.1| DNA topoisomerase (ATP-hydrolyzing) [Oribacterium sinus F0268]
gi|227841893|gb|EEJ52164.1| DNA topoisomerase (ATP-hydrolyzing) [Oribacterium sinus F0268]
Length = 744
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKR---NDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R+VLF + +DR +K A++ G YH HG+ S+ T+
Sbjct: 29 RAVPDIRDGLKPVQRRVLFDMGELRVFHDRPTLKSARICGDTM--GKYHPHGDSSIYETL 86
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ LAQ F N L++ G FG+
Sbjct: 87 VVLAQGF--KKNQALVEGQGNFGSI 109
>gi|255036406|ref|YP_003087027.1| DNA topoisomerase IV subunit A [Dyadobacter fermentans DSM 18053]
gi|254949162|gb|ACT93862.1| DNA topoisomerase (ATP-hydrolyzing) [Dyadobacter fermentans DSM
18053]
Length = 914
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINL 167
ER++P++ DGLKP R+++ + +D R KVA + GS ++ + HG+ S+ I+N+
Sbjct: 39 ERAVPAIEDGLKPVQRRIMHALNEMDDGRFNKVANVVGSSMQY--HPHGDASIYDAIVNI 96
Query: 168 AQ 169
Q
Sbjct: 97 GQ 98
>gi|331004660|ref|ZP_08328122.1| DNA gyrase subunit A [Lachnospiraceae oral taxon 107 str. F0167]
gi|330409587|gb|EGG89027.1| DNA gyrase subunit A [Lachnospiraceae oral taxon 107 str. F0167]
Length = 824
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R+VLF+ ++ N D+ K A++ G YH HG+ S+ ++
Sbjct: 33 RALPDIRDGLKPVQRRVLFSMIELNNGPDKPHRKCARIVGDTM--GKYHPHGDSSIYGSL 90
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+N+AQ + S L+ G FG+
Sbjct: 91 VNMAQEW--SMRYPLVDGHGNFGSV 113
>gi|225386348|ref|ZP_03756112.1| hypothetical protein CLOSTASPAR_00092 [Clostridium asparagiforme
DSM 15981]
gi|225047530|gb|EEG57776.1| hypothetical protein CLOSTASPAR_00092 [Clostridium asparagiforme
DSM 15981]
Length = 850
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R+VLF+ ++ N D+ K A++ G YH HG+ S+ +
Sbjct: 33 RALPDVRDGLKPVQRRVLFSMIELNNGPDKPHRKCARIVGDTM--GKYHPHGDSSIYGAL 90
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+N+AQ + S L+ G FG+
Sbjct: 91 VNMAQEW--STRYPLVDGHGNFGSV 113
>gi|323486744|ref|ZP_08092063.1| hypothetical protein HMPREF9474_03814 [Clostridium symbiosum
WAL-14163]
gi|323694886|ref|ZP_08109036.1| A subunit [Clostridium symbiosum WAL-14673]
gi|323399883|gb|EGA92262.1| hypothetical protein HMPREF9474_03814 [Clostridium symbiosum
WAL-14163]
gi|323500976|gb|EGB16888.1| A subunit [Clostridium symbiosum WAL-14673]
Length = 850
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R+VLF+ ++ N D+ K A++ G YH HG+ S+ +
Sbjct: 33 RALPDVRDGLKPVQRRVLFSMIELNNGPDKPHRKCARIVGDTM--GKYHPHGDSSIYGAL 90
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+N+AQ + S L+ G FG+
Sbjct: 91 VNMAQKW--STRYPLVDGHGNFGSV 113
>gi|257457902|ref|ZP_05623061.1| DNA gyrase, A subunit [Treponema vincentii ATCC 35580]
gi|257444615|gb|EEV19699.1| DNA gyrase, A subunit [Treponema vincentii ATCC 35580]
Length = 838
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRNDR---REVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R++L++ ++N R K A++ G V +YH HG+ S+ +
Sbjct: 36 RALPDVRDGLKPVHRRILYSMEEKNLRYSGPTRKCAKIVGDVL--GSYHPHGDASVYDAL 93
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ L Q+F S ++ P G FGT
Sbjct: 94 VRLGQDF--SLRYPVIHPQGNFGTI 116
>gi|209516132|ref|ZP_03264991.1| DNA topoisomerase IV, A subunit [Burkholderia sp. H160]
gi|209503416|gb|EEA03413.1| DNA topoisomerase IV, A subunit [Burkholderia sp. H160]
Length = 773
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKR---NDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDG KP R++LF + ++ + VK A++ G V YH HG+QS +
Sbjct: 41 RALPDVCDGQKPVQRRILFAMNEMGLGDNAKPVKSARVVGDVL--GKYHPHGDQSAYDAL 98
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ LAQ+F S L+ G FG+
Sbjct: 99 VRLAQDF--SMRYPLIDGQGNFGS 120
>gi|355629838|ref|ZP_09050609.1| DNA gyrase, A subunit [Clostridium sp. 7_3_54FAA]
gi|354818986|gb|EHF03444.1| DNA gyrase, A subunit [Clostridium sp. 7_3_54FAA]
Length = 850
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R+VLF+ ++ N D+ K A++ G YH HG+ S+ +
Sbjct: 33 RALPDVRDGLKPVQRRVLFSMIELNNGPDKPHRKCARIVGDTM--GKYHPHGDSSIYGAL 90
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+N+AQ + S L+ G FG+
Sbjct: 91 VNMAQKW--STRYPLVDGHGNFGSV 113
>gi|170691863|ref|ZP_02883027.1| DNA topoisomerase IV, A subunit [Burkholderia graminis C4D1M]
gi|170143147|gb|EDT11311.1| DNA topoisomerase IV, A subunit [Burkholderia graminis C4D1M]
Length = 774
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLK---RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDG KP R++LF ++ + VK A++ G V YH HG+QS +
Sbjct: 42 RALPDVCDGQKPVQRRILFAMNDMGLSDNAKPVKSARVVGDVL--GKYHPHGDQSAYDAL 99
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ LAQ+F S L+ G FG+
Sbjct: 100 VRLAQDF--SMRYPLIDGQGNFGS 121
>gi|358061293|ref|ZP_09147947.1| DNA gyrase, A subunit [Clostridium hathewayi WAL-18680]
gi|356700052|gb|EHI61558.1| DNA gyrase, A subunit [Clostridium hathewayi WAL-18680]
Length = 849
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R+VLF+ ++ N D+ K A++ G YH HG+ S+ +
Sbjct: 33 RALPDVRDGLKPVQRRVLFSMIELNNGPDKPHRKCARIVGDTM--GKYHPHGDSSIYGAL 90
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+N+AQ + S L+ G FG+
Sbjct: 91 VNMAQEW--STRYPLVDGHGNFGSV 113
>gi|73542042|ref|YP_296562.1| DNA topoisomerase IV subunit A [Ralstonia eutropha JMP134]
gi|72119455|gb|AAZ61718.1| DNA topoisomerase IV subunit A [Ralstonia eutropha JMP134]
Length = 780
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLK---RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DG KP R++LF + R D + VK A++ G V YH HG+QS +
Sbjct: 38 RALPEVADGQKPVQRRILFAMHEMGLRADAKPVKSARVVGDVL--GKYHPHGDQSAYDAL 95
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ LAQ+F S L+ G FG+
Sbjct: 96 VRLAQDF--SLRYPLIDGQGNFGS 117
>gi|336437726|ref|ZP_08617429.1| DNA gyrase, A subunit [Lachnospiraceae bacterium 1_4_56FAA]
gi|336004735|gb|EGN34794.1| DNA gyrase, A subunit [Lachnospiraceae bacterium 1_4_56FAA]
Length = 837
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R++L++ ++ N D+ K A++ G YH HG+ S+ +
Sbjct: 33 RALPDVRDGLKPVQRRILYSMIELNNGPDKPHRKCARIVGDTM--GKYHPHGDSSIYGAL 90
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+NLAQ++ S L+ G FG+
Sbjct: 91 VNLAQDW--STRYPLVDGHGNFGSV 113
>gi|266620983|ref|ZP_06113918.1| DNA gyrase, A subunit [Clostridium hathewayi DSM 13479]
gi|288867364|gb|EFC99662.1| DNA gyrase, A subunit [Clostridium hathewayi DSM 13479]
Length = 840
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R+VLF+ ++ N D+ K A++ G YH HG+ S+ +
Sbjct: 33 RALPDVRDGLKPVQRRVLFSMIELNNGPDKPHRKCARIVGDTM--GKYHPHGDSSIYGAL 90
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+N+AQ + S L+ G FG+
Sbjct: 91 VNMAQEW--STRYPLVDGHGNFGSV 113
>gi|225028833|ref|ZP_03718025.1| hypothetical protein EUBHAL_03120 [Eubacterium hallii DSM 3353]
gi|224953829|gb|EEG35038.1| DNA gyrase, A subunit [Eubacterium hallii DSM 3353]
Length = 852
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R++L++ ++ N D+ K A++ G YH HG+ S+ +
Sbjct: 34 RALPDVRDGLKPVQRRILYSMIELNNGPDKPHRKCARIVGDTM--GKYHPHGDSSIYGAL 91
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+NLAQ++ S L+ G FG+
Sbjct: 92 VNLAQDW--STRYPLVDGHGNFGSV 114
>gi|254251765|ref|ZP_04945083.1| Type IIA topoisomerase [Burkholderia dolosa AUO158]
gi|124894374|gb|EAY68254.1| Type IIA topoisomerase [Burkholderia dolosa AUO158]
Length = 773
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDG KP R++L+ + D + VK A++ G V YH HG+QS +
Sbjct: 41 RALPDVCDGQKPVQRRILYAMNEMGLGPDAKPVKSARVVGDVL--GKYHPHGDQSAYDAL 98
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ LAQ+F S L+ G FG+
Sbjct: 99 VRLAQDF--SLRYPLIDGQGNFGS 120
>gi|330817902|ref|YP_004361607.1| DNA topoisomerase IV subunit A [Burkholderia gladioli BSR3]
gi|327370295|gb|AEA61651.1| DNA topoisomerase IV, A subunit [Burkholderia gladioli BSR3]
Length = 774
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKR---NDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDG KP R++L+ + N+ + VK A++ G V YH HG+QS +
Sbjct: 43 RALPDVCDGQKPVQRRILYAMNEMGLGNNAKPVKSARVVGDVL--GKYHPHGDQSAYDAL 100
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ LAQ+F S L+ G FG+
Sbjct: 101 VRLAQDF--SMRYPLIDGQGNFGS 122
>gi|91782491|ref|YP_557697.1| DNA topoisomerase IV subunit A [Burkholderia xenovorans LB400]
gi|91686445|gb|ABE29645.1| DNA topoisomerase IV subunit A [Burkholderia xenovorans LB400]
Length = 774
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLK---RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDG KP R++LF ++ + VK A++ G V YH HG+QS +
Sbjct: 42 RALPDVCDGQKPVQRRILFAMNDMGLSDNAKPVKSARVVGDVL--GKYHPHGDQSAYDAL 99
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ LAQ+F S L+ G FG+
Sbjct: 100 VRLAQDF--SMRYPLIDGQGNFGS 121
>gi|385203342|ref|ZP_10030212.1| DNA topoisomerase IV, A subunit, proteobacterial [Burkholderia sp.
Ch1-1]
gi|385183233|gb|EIF32507.1| DNA topoisomerase IV, A subunit, proteobacterial [Burkholderia sp.
Ch1-1]
Length = 774
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLK---RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDG KP R++LF ++ + VK A++ G V YH HG+QS +
Sbjct: 42 RALPDVCDGQKPVQRRILFAMNDMGLSDNAKPVKSARVVGDVL--GKYHPHGDQSAYDAL 99
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ LAQ+F S L+ G FG+
Sbjct: 100 VRLAQDF--SMRYPLIDGQGNFGS 121
>gi|338213992|ref|YP_004658049.1| DNA topoisomerase [Runella slithyformis DSM 19594]
gi|336307815|gb|AEI50917.1| DNA topoisomerase (ATP-hydrolyzing) [Runella slithyformis DSM
19594]
Length = 908
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINL 167
ER++P++ DGLKP R++L + +D R KVA + G+ ++ + HG+ S+ I+N+
Sbjct: 73 ERAVPAVEDGLKPVQRRILHALREMDDGRFNKVANVIGATMQY--HPHGDASINEAIVNM 130
Query: 168 AQ 169
Q
Sbjct: 131 GQ 132
>gi|221199540|ref|ZP_03572584.1| DNA topoisomerase IV, A subunit [Burkholderia multivorans CGD2M]
gi|221205560|ref|ZP_03578575.1| DNA topoisomerase IV, A subunit [Burkholderia multivorans CGD2]
gi|421472224|ref|ZP_15920444.1| DNA topoisomerase IV, A subunit [Burkholderia multivorans ATCC
BAA-247]
gi|221174398|gb|EEE06830.1| DNA topoisomerase IV, A subunit [Burkholderia multivorans CGD2]
gi|221180825|gb|EEE13228.1| DNA topoisomerase IV, A subunit [Burkholderia multivorans CGD2M]
gi|400223685|gb|EJO53973.1| DNA topoisomerase IV, A subunit [Burkholderia multivorans ATCC
BAA-247]
Length = 773
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDG KP R++L+ + D + VK A++ G V YH HG+QS +
Sbjct: 41 RALPDVCDGQKPVQRRILYAMNEMGLGPDAKPVKSARVVGDVL--GKYHPHGDQSAYDAL 98
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ LAQ+F S L+ G FG+
Sbjct: 99 VRLAQDF--SLRYPLIDGQGNFGS 120
>gi|386851622|ref|YP_006269635.1| DNA gyrase subunit A [Actinoplanes sp. SE50/110]
gi|359839126|gb|AEV87567.1| DNA gyrase subunit A [Actinoplanes sp. SE50/110]
Length = 841
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 107 NERSIPSLCDGLKPGSRKVLFTCLK---RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMS 162
+ R++P DGLKP R++L++ + R DR VK A++ G V YH HG+ ++
Sbjct: 45 HSRALPDARDGLKPVHRRILWSMSEQGHRPDRGYVKSARVVGDV--MGKYHPHGDVAIYD 102
Query: 163 TIINLAQNFVGSNNINLLQPIGQFGT 188
++ LAQ+F S N+ L+ G FG+
Sbjct: 103 ALVRLAQDF--SLNVPLIDGHGNFGS 126
>gi|422937049|ref|YP_007007314.1| topoisomerase II medium subunit [Enterobacteria phage vB_KleM-RaK2]
gi|375281239|gb|AFA44432.1| topoisomerase II medium subunit [Enterobacteria phage vB_KleM-RaK2]
Length = 468
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 92 TEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHS 151
+E++N + +S +R+IP + DGLK RK +FT K + E+K AG +
Sbjct: 23 SEYLNSTSLEYSMYTLDRAIPGI-DGLKSSQRKAIFTLSKISG--EIKTVSCAGRMISDG 79
Query: 152 AYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
Y HG+ S T+ LA +NN L+ G FGT
Sbjct: 80 IYLHGDSSASGTLQQLASPV--ANNYPLIGKRGGFGT 114
>gi|421475548|ref|ZP_15923490.1| DNA topoisomerase IV, A subunit [Burkholderia multivorans CF2]
gi|400230004|gb|EJO59828.1| DNA topoisomerase IV, A subunit [Burkholderia multivorans CF2]
Length = 773
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDG KP R++L+ + D + VK A++ G V YH HG+QS +
Sbjct: 41 RALPDVCDGQKPVQRRILYAMNEMGLGPDAKPVKSARVVGDVL--GKYHPHGDQSAYDAL 98
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ LAQ+F S L+ G FG+
Sbjct: 99 VRLAQDF--SLRYPLIDGQGNFGS 120
>gi|221211614|ref|ZP_03584593.1| DNA topoisomerase IV, A subunit [Burkholderia multivorans CGD1]
gi|221168975|gb|EEE01443.1| DNA topoisomerase IV, A subunit [Burkholderia multivorans CGD1]
Length = 773
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDG KP R++L+ + D + VK A++ G V YH HG+QS +
Sbjct: 41 RALPDVCDGQKPVQRRILYAMNEMGLGPDAKPVKSARVVGDVL--GKYHPHGDQSAYDAL 98
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ LAQ+F S L+ G FG+
Sbjct: 99 VRLAQDF--SLRYPLIDGQGNFGS 120
>gi|161524096|ref|YP_001579108.1| DNA topoisomerase IV subunit A [Burkholderia multivorans ATCC
17616]
gi|189351147|ref|YP_001946775.1| DNA topoisomerase IV subunit A [Burkholderia multivorans ATCC
17616]
gi|160341525|gb|ABX14611.1| DNA topoisomerase IV, A subunit [Burkholderia multivorans ATCC
17616]
gi|189335169|dbj|BAG44239.1| topoisomerase IV subunit A [Burkholderia multivorans ATCC 17616]
Length = 773
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDG KP R++L+ + D + VK A++ G V YH HG+QS +
Sbjct: 41 RALPDVCDGQKPVQRRILYAMNEMGLGPDAKPVKSARVVGDVL--GKYHPHGDQSAYDAL 98
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ LAQ+F S L+ G FG+
Sbjct: 99 VRLAQDF--SLRYPLIDGQGNFGS 120
>gi|187923203|ref|YP_001894845.1| DNA topoisomerase IV subunit A [Burkholderia phytofirmans PsJN]
gi|187714397|gb|ACD15621.1| DNA topoisomerase IV, A subunit [Burkholderia phytofirmans PsJN]
Length = 774
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLK---RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P +CDG KP R++LF ++ + VK A++ G V YH HG+QS +
Sbjct: 42 RALPDVCDGQKPVQRRILFAMNDMGLSDNAKPVKSARVVGDVL--GKYHPHGDQSAYDAL 99
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+ LAQ+F S L+ G FG+
Sbjct: 100 VRLAQDF--SMRYPLIDGQGNFGS 121
>gi|218134382|ref|ZP_03463186.1| hypothetical protein BACPEC_02276 [[Bacteroides] pectinophilus ATCC
43243]
gi|217989767|gb|EEC55778.1| DNA gyrase/topoisomerase IV, A subunit [[Bacteroides] pectinophilus
ATCC 43243]
Length = 342
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R++LF+ ++ N D+ K A++ G YH HG+ S+ +
Sbjct: 33 RALPDVRDGLKPVQRRILFSMIELNNGPDKPHRKCARIVGDTM--GKYHPHGDSSIYEAL 90
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ LAQ+F S L+ G FG+
Sbjct: 91 VKLAQDF--STRYPLVDGHGNFGSV 113
>gi|410679207|ref|YP_006931609.1| DNA gyrase subunit A [Borrelia afzelii HLJ01]
gi|408536595|gb|AFU74726.1| DNA gyrase, subunit A [Borrelia afzelii HLJ01]
Length = 169
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLK---RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R++L++ + R+D+ K ++ G V YH HG+QS+ +
Sbjct: 34 RALPDVRDGLKPVHRRILYSMYEMGLRSDKAFKKAGRIVGDVL--GKYHPHGDQSIYDAL 91
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ LAQ+F S +++ G FG+
Sbjct: 92 VRLAQDF--SLRYPVIRGQGNFGSI 114
>gi|172056051|ref|YP_001812511.1| DNA gyrase subunit A [Exiguobacterium sibiricum 255-15]
gi|171988572|gb|ACB59494.1| DNA gyrase, A subunit [Exiguobacterium sibiricum 255-15]
Length = 886
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLK---RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKPG R++L+ R D+ K A++ G V YH HG+ ++ T+
Sbjct: 32 RALPDVRDGLKPGHRRILYAMNDLGIRADKPHKKSARIVGEVI--GKYHPHGDSAVYDTM 89
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ+F S L+ G FG+
Sbjct: 90 VRMAQDF--SYRYELVDGHGNFGSV 112
>gi|407475900|ref|YP_006789777.1| DNA gyrase subunit A [Exiguobacterium antarcticum B7]
gi|407059979|gb|AFS69169.1| DNA gyrase subunit A [Exiguobacterium antarcticum B7]
Length = 890
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLK---RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKPG R++L+ R D+ K A++ G V YH HG+ ++ T+
Sbjct: 32 RALPDVRDGLKPGHRRILYAMNDLGIRADKPHKKSARIVGEVI--GKYHPHGDSAVYDTM 89
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ+F S L+ G FG+
Sbjct: 90 VRMAQDF--SYRYELVDGHGNFGSV 112
>gi|404447989|ref|ZP_11012983.1| DNA topoisomerase IV subunit A [Indibacter alkaliphilus LW1]
gi|403766575|gb|EJZ27447.1| DNA topoisomerase IV subunit A [Indibacter alkaliphilus LW1]
Length = 879
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINL 167
ER++P++ DGLKP R++L + +D R KVA + G ++ + HG+ S+ I+NL
Sbjct: 40 ERAVPAIEDGLKPVQRRILHAMKEMDDGRFNKVANIIGQSMQY--HPHGDASIGDAIVNL 97
Query: 168 AQ 169
Q
Sbjct: 98 GQ 99
>gi|399017566|ref|ZP_10719757.1| DNA gyrase, A subunit [Herbaspirillum sp. CF444]
gi|398103164|gb|EJL93337.1| DNA gyrase, A subunit [Herbaspirillum sp. CF444]
Length = 891
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 9/113 (7%)
Query: 82 YTKTTKAITYTEFVNKELILFS-NMDNERSIPSLCDGLKPGSRKVLFTCLKRN---DRRE 137
+ K T I+ E + K + ++ ++ R++P + DGLKP R+VLF + N +R
Sbjct: 4 FAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNVWNRPF 63
Query: 138 VKVAQLAGSVAEHSAYH-HGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGTF 189
VK A++ G V YH HG+ S+ T++ +AQ+F S L+ G FG+
Sbjct: 64 VKCARVVGEVM--GKYHPHGDASIYDTLVRMAQDF--SLRYMLVDGQGNFGSI 112
>gi|319792463|ref|YP_004154103.1| DNA gyrase subunit A [Variovorax paradoxus EPS]
gi|315594926|gb|ADU35992.1| DNA gyrase, A subunit [Variovorax paradoxus EPS]
Length = 881
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P DGLKP R+VLF + N +R K A++ G V YH HG+QS+ TI
Sbjct: 32 RALPDARDGLKPVHRRVLFAMHELNNDWNRPYKKSARIVGDVI--GKYHPHGDQSVYDTI 89
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ LAQ+F S L+ G FG+
Sbjct: 90 VRLAQDF--SMRHMLVDGQGNFGSV 112
>gi|284162534|ref|YP_003401157.1| DNA gyrase subunit alpha [Archaeoglobus profundus DSM 5631]
gi|284012531|gb|ADB58484.1| DNA gyrase, A subunit [Archaeoglobus profundus DSM 5631]
Length = 738
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLK---RNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R++L+ + +D+ VK A++ G V H YH HG+ + +
Sbjct: 28 RALPDVRDGLKPVQRRILYAMYEMGLTHDKPHVKCARVVGHVLGH--YHPHGDAPVYEAL 85
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ+F S L+ G FG+
Sbjct: 86 VRMAQDF--SMRYPLIDGQGNFGSI 108
>gi|414086632|ref|YP_006986821.1| DNA topoisomerase II medium subunit [Enterobacteria phage
vB_EcoM_ACG-C40]
gi|383396413|gb|AFH20229.1| DNA topoisomerase II medium subunit [Enterobacteria phage
vB_EcoM_ACG-C40]
Length = 442
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCL---KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTII 165
R+IP++ DG KP R V+ L + N + K+A +AG VA+ YHHGE S
Sbjct: 27 RAIPNMIDGFKPVQRFVIARALDLARGNKDKFHKLASIAGGVAD-LGYHHGENSAQDAGA 85
Query: 166 NLAQNFVGSNNINLLQPIGQFGT 188
+A + +NN LL G FG+
Sbjct: 86 LMANTW--NNNFPLLDGQGNFGS 106
>gi|397134278|gb|AFO10785.1| hypothetical protein ECML134_259 [Escherichia phage ECML-134]
Length = 442
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCL---KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTII 165
R+IP++ DG KP R V+ L + N + K+A +AG VA+ YHHGE S
Sbjct: 27 RAIPNMIDGFKPVQRFVIARALDLARGNKDKFHKLASIAGGVAD-LGYHHGENSAQDAGA 85
Query: 166 NLAQNFVGSNNINLLQPIGQFGT 188
+A + +NN LL G FG+
Sbjct: 86 LMANTW--NNNFPLLDGQGNFGS 106
>gi|334131893|ref|ZP_08505655.1| DNA gyrase subunit A [Methyloversatilis universalis FAM5]
gi|333443366|gb|EGK71331.1| DNA gyrase subunit A [Methyloversatilis universalis FAM5]
Length = 872
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R+VLF + N R VK A++ G V YH HG+ ++ T+
Sbjct: 33 RALPDVRDGLKPVHRRVLFAMHEANITHSRPYVKCARVVGDVM--GKYHPHGDSAIYDTL 90
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ+F S L+ G FG+
Sbjct: 91 VRMAQDF--SLRYTLIDGQGNFGSV 113
>gi|116326478|ref|YP_803198.1| DNA topoisomerase subunit [Enterobacteria phage RB32]
gi|115344071|gb|ABI95080.1| DNA topoisomerase subunit [Enterobacteria phage RB32]
Length = 442
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCL---KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTII 165
R+IP++ DG KP R V+ L + N + K+A +AG VA+ YHHGE S
Sbjct: 27 RAIPNMIDGFKPVQRFVIARALDLARGNKDKFHKLASIAGGVAD-LGYHHGENSAQDAGA 85
Query: 166 NLAQNFVGSNNINLLQPIGQFGT 188
+A + +NN LL G FG+
Sbjct: 86 LMANTW--NNNFPLLDGQGNFGS 106
>gi|330858778|ref|YP_004415153.1| putative DNA topoisomerase subunit [Shigella phage Shfl2]
gi|422934675|ref|YP_007004636.1| phage-associated DNA topoisomerase [Enterobacteria phage ime09]
gi|327397712|gb|AEA73214.1| putative DNA topoisomerase subunit [Shigella phage Shfl2]
gi|339791458|gb|AEK12515.1| phage-associated DNA topoisomerase [Enterobacteria phage ime09]
Length = 442
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCL---KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTII 165
R+IP++ DG KP R V+ L + N + K+A +AG VA+ YHHGE S
Sbjct: 27 RAIPNMIDGFKPVQRFVIARALDLARGNKDKFHKLASIAGGVAD-LGYHHGENSAQDAGA 85
Query: 166 NLAQNFVGSNNINLLQPIGQFGT 188
+A + +NN LL G FG+
Sbjct: 86 LMANTW--NNNFPLLDGQGNFGS 106
>gi|228861192|ref|YP_002854215.1| gp52 DNA topoisomerase subunit [Enterobacteria phage RB51]
gi|227438866|gb|ACP31178.1| gp52 DNA topoisomerase subunit [Enterobacteria phage RB51]
Length = 442
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCL---KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTII 165
R+IP++ DG KP R V+ L + N + K+A +AG VA+ YHHGE S
Sbjct: 27 RAIPNMIDGFKPVQRFVIARALDLARGNKDKFHKLASIAGGVAD-LGYHHGENSAQDAGA 85
Query: 166 NLAQNFVGSNNINLLQPIGQFGT 188
+A + +NN LL G FG+
Sbjct: 86 LMANTW--NNNFPLLDGQGNFGS 106
>gi|89243025|gb|ABD64768.1| topoisomerase IV ParC subunit [Parachlamydia acanthamoebae]
Length = 93
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTIIN 166
+R+IP + DGLKP R++L T +D + KVA +AG AYH HG+ + ++N
Sbjct: 7 DRAIPHVIDGLKPVQRRILHTLWSMDDGKLHKVANVAGQTM---AYHPHGDAPITEALVN 63
Query: 167 LAQNFVGSNNINLLQPIGQFGTFL 190
+A N LL G FG
Sbjct: 64 MA------NRGYLLDQQGNFGNIF 81
>gi|89243027|gb|ABD64769.1| topoisomerase IV ParC subunit [Parachlamydia acanthamoebae]
Length = 94
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYH-HGEQSLMSTIIN 166
+R+IP + DGLKP R++L T +D + KVA +AG AYH HG+ + ++N
Sbjct: 7 DRAIPHVIDGLKPVQRRILHTLWSMDDGKLHKVANVAGQTM---AYHPHGDAPITEALVN 63
Query: 167 LAQNFVGSNNINLLQPIGQFGTFL 190
+A N LL G FG
Sbjct: 64 MA------NRGYLLDQQGNFGNIF 81
>gi|46445985|ref|YP_007350.1| DNA topoisomerase IV subunit A [Candidatus Protochlamydia
amoebophila UWE25]
gi|46399626|emb|CAF23075.1| putative DNA gyrase (topoisomerase) chain A [Candidatus
Protochlamydia amoebophila UWE25]
Length = 633
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINL 167
+R+IP++ DGLKP R++L+T +D + KVA +AG + + HG+ + +IN+
Sbjct: 22 DRAIPNVIDGLKPVQRRILYTLWLMHDGKLHKVANVAGQTM--ALHPHGDAPITEALINI 79
Query: 168 AQNFVGSNNINLLQPIGQFGTFL 190
A N LL G FG
Sbjct: 80 A------NKGYLLDQQGNFGNLF 96
>gi|9632656|ref|NP_049875.1| gp52 topoisomerase II, medium subunit [Enterobacteria phage T4]
gi|1351263|sp|P07065.2|TOP5_BPT4 RecName: Full=DNA topoisomerase medium subunit; AltName:
Full=Protein Gp52
gi|5354280|gb|AAD42487.1|AF158101_74 gp52 topoisomerase II, medium subunit [Enterobacteria phage T4]
gi|728620|emb|CAA27959.1| 52-protein [Enterobacteria phage T4]
gi|299780622|gb|ADJ39984.1| DNA topoisomerase II medium subunit [Enterobacteria phage T4T]
Length = 442
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCL---KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTII 165
R+IP++ DG KP R V+ L + N + K+A +AG VA+ YHHGE S
Sbjct: 27 RAIPNMIDGFKPVQRFVIARALDLARGNKDKFHKLASIAGGVAD-LGYHHGENSAQDAGA 85
Query: 166 NLAQNFVGSNNINLLQPIGQFGT 188
+A + +NN LL G FG+
Sbjct: 86 LMANTW--NNNFPLLDGQGNFGS 106
>gi|414087238|ref|YP_006987425.1| DNA topoisomerase II [Cronobacter phage vB_CsaM_GAP32]
gi|378566072|gb|AFC21770.1| DNA topoisomerase II [Cronobacter phage vB_CsaM_GAP32]
Length = 468
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 92 TEFVNKELILFSNMDNERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHS 151
++++N+ + ++ +RS+P + DG K RK +FT K + E+K AG +
Sbjct: 23 SDYINQSSLEYALSTFDRSLPGI-DGFKNSQRKAIFTLSKISG--EIKTVSCAGRMISDG 79
Query: 152 AYHHGEQSLMSTIINLAQNFVGSNNINLLQPIGQFGT 188
Y HG+ S T+ NLA V NN L+ G FGT
Sbjct: 80 IYLHGDASASGTLQNLASPVV--NNYPLIGKRGGFGT 114
>gi|398313810|emb|CCI89157.1| DNA topoisomerase, phage-associated [Yersinia phage phiD1]
Length = 442
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCL---KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTII 165
R+IP++ DG KP R V+ L + N + K+A +AG VA+ YHHGE S
Sbjct: 27 RAIPNMIDGFKPVQRFVIARALDLARGNKDKFHKLASIAGGVAD-LGYHHGENSAQDAGA 85
Query: 166 NLAQNFVGSNNINLLQPIGQFGT 188
+A + +NN LL G FG+
Sbjct: 86 LMANTW--NNNFPLLDGQGNFGS 106
>gi|291290484|dbj|BAI83279.1| topoisomerase II medium subunit [Enterobacteria phage AR1]
Length = 442
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCL---KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTII 165
R+IP++ DG KP R V+ L + N + K+A +AG VA+ YHHGE S
Sbjct: 27 RAIPNMIDGFKPVQRFVIARALDLARGNKDKFHKLASIAGGVAD-LGYHHGENSAQDAGA 85
Query: 166 NLAQNFVGSNNINLLQPIGQFGT 188
+A + +NN LL G FG+
Sbjct: 86 LMANTW--NNNFPLLDGQGNFGS 106
>gi|422935042|ref|YP_007005002.1| topoisomerase II medium subunit [Escherichia phage wV7]
gi|343177596|gb|AEM00922.1| topoisomerase II medium subunit [Escherichia phage wV7]
Length = 442
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCL---KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTII 165
R+IP++ DG KP R V+ L + N + K+A +AG VA+ YHHGE S
Sbjct: 27 RAIPNMIDGFKPVQRFVIARALDLARGNKDKFHKLASIAGGVAD-LGYHHGENSAQDAGA 85
Query: 166 NLAQNFVGSNNINLLQPIGQFGT 188
+A + +NN LL G FG+
Sbjct: 86 LMANTW--NNNFPLLDGQGNFGS 106
>gi|32453746|ref|NP_861955.1| DNA topisomerase II medium subunit [Enterobacteria phage RB69]
gi|32350565|gb|AAP76164.1| gp52 topoisomerase II, medium subunit [Enterobacteria phage RB69]
Length = 441
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCL---KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTII 165
R+IP++ DG KP R V+ L + N + K+A +AG VA+ YHHGE S
Sbjct: 27 RAIPNMIDGFKPVQRFVVHRALDLARGNKEKFHKLASIAGGVAD-LGYHHGESSAQDAGA 85
Query: 166 NLAQNFVGSNNINLLQPIGQFGT 188
+A + +NN LL G FG+
Sbjct: 86 LMANTW--NNNYPLLDGQGNFGS 106
>gi|456351348|ref|YP_007501300.1| DNA topisomerase II medium subunit [Salmonella phage S16]
gi|347466392|gb|AEO97178.1| DNA topisomerase II medium subunit [Salmonella phage S16]
gi|408386934|gb|AFU63943.1| DNA topoisomerase [Salmonella phage STML-198]
Length = 445
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCL---KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTII 165
R+IP++ DG KP R V+ L K N + K+A +AG VA+ YHHGE S
Sbjct: 27 RAIPNMIDGFKPVQRFVIRRALDLSKGNKEKFHKLASVAGGVAD-LGYHHGEGSAQDAGA 85
Query: 166 NLAQNFVGSNNINLLQPIGQFGTFL 190
+A + +NN LL G FG+ L
Sbjct: 86 LMANTW--NNNFPLLDGQGNFGSRL 108
>gi|302384450|ref|YP_003820272.1| DNA gyrase subunit A [Clostridium saccharolyticum WM1]
gi|302195078|gb|ADL02649.1| DNA gyrase, A subunit [Clostridium saccharolyticum WM1]
Length = 853
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R+VL++ ++ N D+ K A++ G YH HG+ S+ +
Sbjct: 33 RALPDVRDGLKPVQRRVLYSMIELNNGPDKPHRKCARIVGDTM--GKYHPHGDSSIYGAL 90
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+NLAQ + S L+ G FG+
Sbjct: 91 VNLAQEW--STRYPLVDGHGNFGSV 113
>gi|15834656|ref|NP_296415.1| DNA topoisomerase IV subunit A [Chlamydia muridarum Nigg]
gi|270284821|ref|ZP_06194215.1| DNA topoisomerase IV subunit A [Chlamydia muridarum Nigg]
gi|270288850|ref|ZP_06195152.1| DNA topoisomerase IV subunit A [Chlamydia muridarum Weiss]
gi|301336201|ref|ZP_07224403.1| DNA topoisomerase IV subunit A [Chlamydia muridarum MopnTet14]
gi|7190071|gb|AAF38922.1| DNA gyrase, subunit A [Chlamydia muridarum Nigg]
Length = 490
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 10/84 (11%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAG-SVAEHSAYHHGEQSLMSTIIN 166
ER+IP + DGLKP R++L+T + +D + KVA +AG ++A H HG+ ++ ++
Sbjct: 22 ERAIPHVLDGLKPVQRRLLWTLFRMDDGKMHKVANIAGRTMALHP---HGDAPIVEALVV 78
Query: 167 LAQNFVGSNNINLLQPIGQFGTFL 190
LA N L++ G FG L
Sbjct: 79 LA------NKGFLIETQGNFGNPL 96
>gi|336429164|ref|ZP_08609132.1| DNA gyrase, A subunit [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336003080|gb|EGN33171.1| DNA gyrase, A subunit [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 855
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 8/84 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R+VL++ ++ N D+ K A++ G YH HG+ S+ ++
Sbjct: 33 RALPDVRDGLKPVQRRVLYSMIELNNGPDKPHRKCARIVGDTM--GKYHPHGDSSIYGSL 90
Query: 165 INLAQNFVGSNNINLLQPIGQFGT 188
+N+AQ + S L+ G FG+
Sbjct: 91 VNMAQEW--STRYPLVDGHGNFGS 112
>gi|89898786|ref|YP_515896.1| DNA topoisomerase IV subunit A [Chlamydophila felis Fe/C-56]
gi|89332158|dbj|BAE81751.1| DNA gyrase subunit A [Chlamydophila felis Fe/C-56]
Length = 479
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 10/84 (11%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAG-SVAEHSAYHHGEQSLMSTIIN 166
ER+IP + DGLKP R++L+T + +D + KVA +AG ++A H HG+ ++ ++
Sbjct: 22 ERAIPHILDGLKPVQRRLLWTLFRMDDGKMHKVANIAGRTMALHP---HGDAPIVEALVV 78
Query: 167 LAQNFVGSNNINLLQPIGQFGTFL 190
LA N L+ G FG L
Sbjct: 79 LA------NKGYLIDTQGNFGNPL 96
>gi|304373560|ref|YP_003858305.1| gp52 DNA topoisomerase subunit [Enterobacteria phage RB16]
gi|299829516|gb|ADJ55309.1| gp52 DNA topoisomerase subunit [Enterobacteria phage RB16]
Length = 428
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINLA 168
R+IP L DG KP R + + K + KVA +AG VA + YHHGE S+ + +A
Sbjct: 24 RAIPHLVDGFKPVHRFFIHSAAKGGTGFQ-KVASIAGGVAMY-GYHHGETSVEEALSLMA 81
Query: 169 QNFVGSNNINLLQPIGQFGTFL 190
++ NNI L + G FG+ L
Sbjct: 82 AHW--CNNIPLFERDGFFGSRL 101
>gi|240145737|ref|ZP_04744338.1| DNA gyrase, A subunit [Roseburia intestinalis L1-82]
gi|257202153|gb|EEV00438.1| DNA gyrase, A subunit [Roseburia intestinalis L1-82]
gi|291536985|emb|CBL10097.1| DNA gyrase subunit A [Roseburia intestinalis M50/1]
gi|291539811|emb|CBL12922.1| DNA gyrase subunit A [Roseburia intestinalis XB6B4]
Length = 874
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMST 163
+R++P + DGLKP R+VL++ ++ N D+ K A++ G YH HG+ S+
Sbjct: 32 QRALPDVRDGLKPVQRRVLYSMIELNNGPDKPHRKCARIVGDTM--GKYHPHGDSSIYGA 89
Query: 164 IINLAQNFVGSNNINLLQPIGQFGTF 189
++N+AQ + S L+ G FG+
Sbjct: 90 LVNMAQEW--STRYPLVDGHGNFGSV 113
>gi|293604169|ref|ZP_06686577.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Achromobacter
piechaudii ATCC 43553]
gi|292817394|gb|EFF76467.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Achromobacter
piechaudii ATCC 43553]
Length = 891
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCLKRN---DRREVKVAQLAGSVAEHSAYH-HGEQSLMSTI 164
R++P + DGLKP R+VL+ + N +R K A++ G V YH HG+QS+ TI
Sbjct: 32 RALPDVRDGLKPVHRRVLYAMHELNNDWNRAYKKSARIVGDVI--GKYHPHGDQSVYDTI 89
Query: 165 INLAQNFVGSNNINLLQPIGQFGTF 189
+ +AQ+F S L+ G FG+
Sbjct: 90 VRMAQDF--SMRYMLVDGQGNFGSI 112
>gi|255349048|ref|ZP_05381055.1| DNA topoisomerase IV subunit A [Chlamydia trachomatis 70]
gi|255503586|ref|ZP_05381976.1| DNA topoisomerase IV subunit A [Chlamydia trachomatis 70s]
gi|255507266|ref|ZP_05382905.1| DNA topoisomerase IV subunit A [Chlamydia trachomatis D(s)2923]
gi|389858355|ref|YP_006360597.1| DNA gyrase subunit A [Chlamydia trachomatis F/SW4]
gi|389860107|ref|YP_006362347.1| DNA gyrase subunit A [Chlamydia trachomatis F/SW5]
gi|380249427|emb|CCE14723.1| DNA gyrase subunit A [Chlamydia trachomatis F/SW5]
gi|380250302|emb|CCE13834.1| DNA gyrase subunit A [Chlamydia trachomatis F/SW4]
gi|440527372|emb|CCP52856.1| DNA topoisomerase IV subunit A [Chlamydia trachomatis D/SotonD1]
gi|440531835|emb|CCP57345.1| DNA topoisomerase IV subunit A [Chlamydia trachomatis F/SotonF3]
Length = 490
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 10/84 (11%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAG-SVAEHSAYHHGEQSLMSTIIN 166
ER+IP + DGLKP R++L+T + +D + KVA +AG ++A H HG+ ++ ++
Sbjct: 22 ERAIPHVLDGLKPVQRRLLWTLFRMDDGKMHKVANIAGRTMALHP---HGDAPIVEALVV 78
Query: 167 LAQNFVGSNNINLLQPIGQFGTFL 190
LA N L++ G FG L
Sbjct: 79 LA------NKGFLIETQGNFGNPL 96
>gi|228861574|ref|YP_002854595.1| gp52 DNA topoisomerase subunit [Enterobacteria phage RB14]
gi|227438590|gb|ACP30903.1| gp52 DNA topoisomerase subunit [Enterobacteria phage RB14]
Length = 442
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 109 RSIPSLCDGLKPGSRKVLFTCL---KRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTII 165
R+IP++ DG KP R V+ L + N + K+A +AG VA+ YHHGE S
Sbjct: 27 RAIPNMIDGFKPVQRFVIARALDLARGNKDKFHKLASIAGGVAD-LGYHHGENSAQDAGA 85
Query: 166 NLAQNFVGSNNINLLQPIGQFGT 188
+A + +NN LL G FG+
Sbjct: 86 LMANTW--NNNFPLLDGQGNFGS 106
>gi|375144230|ref|YP_005006671.1| DNA topoisomerase [Niastella koreensis GR20-10]
gi|361058276|gb|AEV97267.1| DNA topoisomerase (ATP-hydrolyzing) [Niastella koreensis GR20-10]
Length = 841
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 108 ERSIPSLCDGLKPGSRKVLFTCLKRNDRREVKVAQLAGSVAEHSAYHHGEQSLMSTIINL 167
ER++P++ DGLKP R++L+ + +D R KVA + G ++ + HG+ S+ ++N+
Sbjct: 36 ERAVPAVEDGLKPVQRRILYAMKEMDDGRFNKVANIIGQSMQY--HPHGDASIGDALVNM 93
Query: 168 AQ 169
Q
Sbjct: 94 GQ 95
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.133 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,477,496,562
Number of Sequences: 23463169
Number of extensions: 220323891
Number of successful extensions: 539573
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 4706
Number of HSP's that attempted gapping in prelim test: 534216
Number of HSP's gapped (non-prelim): 7052
length of query: 363
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 219
effective length of database: 8,980,499,031
effective search space: 1966729287789
effective search space used: 1966729287789
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)