Query psy11241
Match_columns 148
No_of_seqs 173 out of 1045
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 21:45:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11241.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11241hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h2g_A 5'-nucleotidase; dimer, 100.0 5.5E-30 1.9E-34 216.8 17.6 143 3-148 182-325 (546)
2 4h1s_A 5'-nucleotidase; hydrol 100.0 4.6E-30 1.6E-34 216.3 17.1 143 3-148 160-303 (530)
3 2z1a_A 5'-nucleotidase; metal- 100.0 7.2E-28 2.4E-32 204.0 17.6 141 4-148 181-323 (552)
4 3ztv_A NAD nucleotidase, NADN; 100.0 2.1E-28 7E-33 208.5 12.6 144 3-148 168-347 (579)
5 3gve_A YFKN protein; alpha-bet 100.0 1.2E-27 3.9E-32 192.5 14.0 133 5-148 184-332 (341)
6 3jyf_A 2',3'-cyclic nucleotide 99.9 1.9E-27 6.5E-32 191.2 12.8 135 5-148 178-330 (339)
7 3ive_A Nucleotidase; structura 99.9 2.3E-24 7.8E-29 181.0 14.8 122 5-148 163-302 (509)
8 2wdc_A SOXB, sulfur oxidation 99.9 5.6E-24 1.9E-28 180.7 14.8 121 6-148 232-353 (562)
9 3qfk_A Uncharacterized protein 99.9 1.7E-23 6E-28 176.2 9.3 116 6-148 177-310 (527)
10 1hp1_A 5'-nucleotidase; metall 99.9 2.4E-22 8.1E-27 168.7 16.0 136 6-148 160-319 (516)
11 3c9f_A 5'-nucleotidase; 2',3'- 99.8 1.5E-20 5.2E-25 159.5 8.3 122 5-148 173-321 (557)
12 2z06_A Putative uncharacterize 99.4 3.6E-13 1.2E-17 104.0 5.2 56 9-68 120-177 (252)
13 1t70_A Phosphatase; crystal, X 99.3 6.4E-13 2.2E-17 102.8 4.4 56 9-68 123-180 (255)
14 1t71_A Phosphatase, conserved 99.3 1.2E-12 4.1E-17 102.6 5.5 57 8-68 132-190 (281)
15 2xmo_A LMO2642 protein; phosph 97.2 0.0051 1.7E-07 49.7 12.0 99 12-130 219-334 (443)
16 3d03_A Phosphohydrolase; glyce 96.8 0.0042 1.4E-07 46.4 7.2 37 30-66 148-200 (274)
17 1nnw_A Hypothetical protein; s 96.1 0.011 3.8E-07 43.9 6.2 52 32-105 132-197 (252)
18 1s3l_A Hypothetical protein MJ 96.0 0.011 3.8E-07 42.8 5.5 53 31-105 115-167 (190)
19 3ck2_A Conserved uncharacteriz 95.8 0.03 1E-06 39.6 7.0 51 31-104 77-134 (176)
20 2kkn_A Uncharacterized protein 95.8 0.035 1.2E-06 39.8 7.2 58 32-111 103-165 (178)
21 1z2w_A Vacuolar protein sortin 95.7 0.031 1.1E-06 40.2 6.7 51 32-105 90-147 (192)
22 3ib7_A ICC protein; metallopho 95.2 0.29 1E-05 37.2 11.3 15 52-66 210-224 (330)
23 2a22_A Vacuolar protein sortin 95.2 0.08 2.7E-06 38.8 7.5 52 31-105 113-171 (215)
24 2yvt_A Hypothetical protein AQ 94.8 0.084 2.9E-06 39.0 6.9 30 53-105 212-241 (260)
25 3qfm_A SAPH, putative uncharac 94.7 0.2 7E-06 38.0 8.9 33 52-105 163-195 (270)
26 2nxf_A Putative dimetal phosph 94.4 0.1 3.6E-06 39.3 6.6 52 13-66 205-270 (322)
27 1ute_A Protein (II purple acid 94.0 0.22 7.6E-06 37.3 7.8 44 21-66 170-226 (313)
28 1xzw_A Purple acid phosphatase 93.8 0.074 2.5E-06 42.8 5.0 37 29-66 276-327 (426)
29 2q8u_A Exonuclease, putative; 93.8 0.13 4.5E-06 40.0 6.2 50 17-66 169-233 (336)
30 1uf3_A Hypothetical protein TT 93.7 0.14 4.7E-06 36.8 5.8 50 31-104 149-208 (228)
31 1g5b_A Serine/threonine protei 93.5 0.14 4.7E-06 37.4 5.6 39 52-112 177-216 (221)
32 1su1_A Hypothetical protein YF 93.5 0.043 1.5E-06 40.1 2.8 49 33-104 124-172 (208)
33 2qfp_A Purple acid phosphatase 93.3 0.14 4.8E-06 41.1 5.8 37 29-66 269-320 (424)
34 3rqz_A Metallophosphoesterase; 92.1 0.24 8.2E-06 36.7 5.3 15 52-66 141-155 (246)
35 3av0_A DNA double-strand break 91.4 0.27 9.3E-06 39.1 5.2 37 30-66 170-211 (386)
36 3t1i_A Double-strand break rep 90.4 0.19 6.4E-06 41.2 3.4 38 29-66 228-270 (431)
37 3tgh_A Glideosome-associated p 90.0 1.6 5.6E-05 34.3 8.5 36 30-66 190-238 (342)
38 1ii7_A MRE11 nuclease; RAD50, 87.7 0.74 2.5E-05 35.7 4.9 34 33-66 168-211 (333)
39 3tho_B Exonuclease, putative; 87.5 0.58 2E-05 37.2 4.3 38 29-66 165-215 (379)
40 1xm7_A Hypothetical protein AQ 85.4 0.87 3E-05 32.3 3.9 36 31-67 106-153 (195)
41 3rl5_A Metallophosphoesterase 84.2 1.3 4.4E-05 34.4 4.6 33 52-105 245-277 (296)
42 4fbw_A DNA repair protein RAD3 71.7 3.2 0.00011 33.7 3.6 37 29-67 209-252 (417)
43 1vp8_A Hypothetical protein AF 70.5 12 0.00043 27.3 6.1 51 14-66 29-79 (201)
44 2qjc_A Diadenosine tetraphosph 64.7 10 0.00034 28.3 4.9 50 52-124 195-245 (262)
45 3s99_A Basic membrane lipoprot 64.0 9.8 0.00034 29.9 4.9 44 16-60 74-117 (356)
46 4fbk_A DNA repair and telomere 63.3 6 0.0002 32.7 3.6 38 30-67 273-315 (472)
47 2l82_A Designed protein OR32; 62.2 20 0.00068 23.9 5.4 32 8-40 6-37 (162)
48 3lkv_A Uncharacterized conserv 56.1 22 0.00074 26.7 5.5 45 14-62 55-99 (302)
49 1t57_A Conserved protein MTH16 53.9 45 0.0015 24.4 6.5 50 14-66 37-86 (206)
50 2yxb_A Coenzyme B12-dependent 52.4 25 0.00087 24.2 4.9 45 16-61 57-108 (161)
51 3knu_A TRNA (guanine-N(1)-)-me 52.1 16 0.00054 27.7 3.9 45 18-63 89-136 (253)
52 2fqx_A Membrane lipoprotein TM 49.5 33 0.0011 25.8 5.6 42 18-60 52-93 (318)
53 3ky7_A TRNA (guanine-N(1)-)-me 48.6 15 0.00052 28.0 3.4 47 15-63 89-138 (269)
54 1oy5_A TRNA (guanine-N(1)-)-me 48.6 20 0.0007 27.1 4.1 31 31-62 84-117 (257)
55 1o97_C Electron transferring f 47.2 21 0.00073 26.9 4.1 44 20-64 72-123 (264)
56 3quv_A TRNA (guanine-N(1)-)-me 47.2 16 0.00056 27.5 3.3 45 15-62 68-115 (246)
57 1vp8_A Hypothetical protein AF 45.3 30 0.001 25.2 4.4 47 14-63 54-108 (201)
58 3q3v_A Phosphoglycerate kinase 43.5 19 0.00066 29.1 3.5 27 14-42 42-68 (403)
59 1q77_A Hypothetical protein AQ 42.7 45 0.0016 21.2 4.8 10 52-61 108-117 (138)
60 2wzb_A Phosphoglycerate kinase 42.6 25 0.00086 28.6 4.0 28 14-42 39-66 (416)
61 1qpg_A PGK, 3-phosphoglycerate 42.6 25 0.00087 28.5 4.0 28 14-42 39-66 (415)
62 1efp_B ETF, protein (electron 42.0 33 0.0011 25.6 4.4 43 21-64 72-124 (252)
63 1efv_B Electron transfer flavo 41.4 40 0.0014 25.2 4.8 44 20-64 74-127 (255)
64 2q5c_A NTRC family transcripti 41.1 25 0.00087 25.0 3.5 19 16-35 130-148 (196)
65 1vpe_A Phosphoglycerate kinase 38.4 26 0.00089 28.3 3.5 27 14-42 36-62 (398)
66 1php_A 3-phosphoglycerate kina 38.3 26 0.00089 28.3 3.5 27 14-42 37-63 (394)
67 2pju_A Propionate catabolism o 38.2 36 0.0012 25.0 4.1 20 15-35 141-160 (225)
68 4fey_A Phosphoglycerate kinase 38.1 19 0.00066 29.0 2.7 27 14-42 40-66 (395)
69 1zmr_A Phosphoglycerate kinase 37.7 27 0.00092 28.1 3.5 27 14-42 37-63 (387)
70 1v6s_A Phosphoglycerate kinase 37.6 27 0.00093 28.1 3.5 27 14-42 35-61 (390)
71 2yeq_A Apased, PHOD, alkaline 37.0 62 0.0021 26.7 5.7 46 21-67 315-386 (527)
72 16pk_A PGK, 3-phosphoglycerate 37.0 28 0.00095 28.3 3.5 27 14-42 36-62 (415)
73 3lft_A Uncharacterized protein 36.9 76 0.0026 23.1 5.8 43 15-61 49-91 (295)
74 3oz7_A Phosphoglycerate kinase 35.6 22 0.00077 28.9 2.7 28 14-42 42-69 (417)
75 1c9k_A COBU, adenosylcobinamid 35.2 55 0.0019 23.1 4.5 45 16-61 114-175 (180)
76 1ual_A TRNA (guanine-N(1)-)-me 33.3 32 0.0011 26.3 3.1 31 31-62 102-135 (274)
77 2hqb_A Transcriptional activat 33.3 27 0.00093 26.0 2.7 16 20-36 55-70 (296)
78 2k9k_A TONB2; metal transport; 32.8 90 0.0031 19.4 5.0 38 109-148 43-80 (106)
79 2cun_A Phosphoglycerate kinase 32.8 31 0.001 28.0 3.0 28 14-43 35-62 (410)
80 2z06_A Putative uncharacterize 32.3 71 0.0024 23.9 4.9 50 14-66 15-69 (252)
81 3iv7_A Alcohol dehydrogenase I 31.9 33 0.0011 27.0 3.1 28 12-40 72-99 (364)
82 2l82_A Designed protein OR32; 31.8 1.1E+02 0.0039 20.2 5.4 46 11-58 86-134 (162)
83 3rxy_A NIF3 protein; structura 31.3 64 0.0022 24.7 4.4 41 20-63 212-252 (278)
84 4fn4_A Short chain dehydrogena 30.0 1E+02 0.0035 22.7 5.5 45 14-59 41-90 (254)
85 3hl0_A Maleylacetate reductase 29.6 39 0.0013 26.4 3.1 27 13-40 72-98 (353)
86 2qh8_A Uncharacterized protein 29.4 1E+02 0.0036 22.5 5.5 42 15-60 56-97 (302)
87 1u07_A TONB protein; beta-hair 29.0 85 0.0029 18.9 4.2 37 109-147 28-64 (90)
88 3jzd_A Iron-containing alcohol 28.7 37 0.0013 26.6 2.9 27 13-40 74-100 (358)
89 1vlj_A NADH-dependent butanol 28.4 45 0.0015 26.4 3.4 37 12-49 85-122 (407)
90 2kpo_A Rossmann 2X2 fold prote 27.7 87 0.003 19.5 3.9 45 12-57 33-79 (110)
91 2pju_A Propionate catabolism o 27.7 1.2E+02 0.0041 22.1 5.4 55 7-61 14-71 (225)
92 3ewb_X 2-isopropylmalate synth 27.6 89 0.0031 23.7 4.8 52 14-66 149-208 (293)
93 2wqp_A Polysialic acid capsule 26.9 1.5E+02 0.0051 23.3 6.1 49 13-62 159-216 (349)
94 2pjk_A 178AA long hypothetical 26.8 97 0.0033 21.6 4.6 32 11-42 63-94 (178)
95 3ih5_A Electron transfer flavo 26.7 57 0.002 23.6 3.4 42 21-64 52-102 (217)
96 3bfj_A 1,3-propanediol oxidore 26.7 56 0.0019 25.6 3.6 27 12-39 76-102 (387)
97 1oj7_A Hypothetical oxidoreduc 26.1 47 0.0016 26.3 3.1 37 12-49 90-127 (408)
98 1vdm_A Purine phosphoribosyltr 26.1 69 0.0024 21.2 3.6 41 10-51 8-48 (153)
99 1ccw_A Protein (glutamate muta 25.8 1.4E+02 0.0049 19.5 5.4 45 16-61 42-93 (137)
100 3iwt_A 178AA long hypothetical 25.8 1E+02 0.0036 21.1 4.6 30 12-41 64-93 (178)
101 1mkz_A Molybdenum cofactor bio 25.7 1E+02 0.0035 21.3 4.5 33 11-43 51-83 (172)
102 3ox4_A Alcohol dehydrogenase 2 25.6 41 0.0014 26.5 2.7 27 12-39 72-98 (383)
103 3fet_A Electron transfer flavo 25.6 49 0.0017 23.0 2.8 34 29-63 43-79 (166)
104 1rrm_A Lactaldehyde reductase; 25.6 55 0.0019 25.6 3.4 37 12-49 72-109 (386)
105 3qkb_A Uncharacterized protein 25.2 79 0.0027 20.8 3.5 17 19-36 66-82 (111)
106 1req_A Methylmalonyl-COA mutas 25.1 1.1E+02 0.0037 26.7 5.3 44 16-60 635-685 (727)
107 2g2c_A Putative molybdenum cof 25.1 1.1E+02 0.0036 21.0 4.5 34 10-44 51-84 (167)
108 3uhj_A Probable glycerol dehyd 25.0 56 0.0019 25.9 3.3 28 12-40 90-117 (387)
109 3dlo_A Universal stress protei 25.0 1.2E+02 0.004 20.0 4.6 45 18-64 81-129 (155)
110 2z72_A Protein-tyrosine-phosph 24.9 89 0.003 24.1 4.4 13 53-65 278-290 (342)
111 3ief_A TRNA (guanine-N(1)-)-me 24.5 29 0.00098 25.9 1.4 30 32-62 82-114 (233)
112 4fbl_A LIPS lipolytic enzyme; 24.4 61 0.0021 23.4 3.3 49 7-57 98-148 (281)
113 1efv_A Electron transfer flavo 24.2 95 0.0032 23.9 4.4 43 19-63 44-96 (315)
114 2q5c_A NTRC family transcripti 23.2 1.4E+02 0.0048 21.0 4.9 53 7-61 6-59 (196)
115 1jq5_A Glycerol dehydrogenase; 23.1 72 0.0024 24.7 3.6 27 12-39 70-96 (370)
116 4hhu_A OR280; engineered prote 23.1 1.7E+02 0.006 19.5 5.3 44 7-50 86-142 (170)
117 2yxo_A Histidinol phosphatase; 23.1 98 0.0034 22.2 4.2 30 12-42 13-42 (267)
118 3fdx_A Putative filament prote 23.0 88 0.003 19.7 3.6 27 36-63 89-116 (143)
119 3gk0_A PNP synthase, pyridoxin 21.8 1.5E+02 0.0051 22.7 4.9 34 2-36 129-162 (278)
120 1jlj_A Gephyrin; globular alph 21.7 1.4E+02 0.0047 21.0 4.6 34 10-43 59-92 (189)
121 2jz7_A Selenium binding protei 21.6 66 0.0023 19.9 2.5 23 14-37 34-56 (81)
122 4h3z_A TRNA (guanine-N(1)-)-me 21.5 86 0.003 24.0 3.6 31 31-62 107-140 (276)
123 1vr4_A Hypothetical protein AP 21.5 1E+02 0.0035 19.7 3.5 21 16-37 61-81 (103)
124 3p2o_A Bifunctional protein fo 21.5 41 0.0014 25.8 1.8 36 19-60 175-210 (285)
125 1o2d_A Alcohol dehydrogenase, 21.4 81 0.0028 24.6 3.6 36 13-49 83-119 (371)
126 1uuy_A CNX1, molybdopterin bio 20.9 1.5E+02 0.0051 20.2 4.6 34 10-43 52-85 (167)
127 2r91_A 2-keto-3-deoxy-(6-phosp 20.8 2.1E+02 0.0072 21.3 5.8 28 14-42 18-45 (286)
128 2z08_A Universal stress protei 20.8 98 0.0033 19.5 3.4 48 15-64 60-111 (137)
129 4g81_D Putative hexonate dehyd 20.8 1.7E+02 0.0057 21.6 5.1 44 15-59 44-92 (255)
130 3rmj_A 2-isopropylmalate synth 20.7 1.3E+02 0.0043 23.7 4.6 52 14-66 156-215 (370)
131 1y5e_A Molybdenum cofactor bio 20.7 1.4E+02 0.0049 20.4 4.4 34 10-43 53-86 (169)
132 2i2x_B MTAC, methyltransferase 20.6 2E+02 0.0068 21.1 5.5 44 17-61 163-212 (258)
133 3dmp_A Uracil phosphoribosyltr 20.5 1.1E+02 0.0039 22.2 4.0 45 15-60 143-190 (217)
134 1nul_A XPRT, xanthine-guanine 20.5 66 0.0023 21.6 2.6 46 12-57 11-58 (152)
135 3eeg_A 2-isopropylmalate synth 20.4 1E+02 0.0036 23.7 4.0 52 14-66 150-209 (325)
136 3idf_A USP-like protein; unive 20.3 1.7E+02 0.0057 18.2 5.2 43 20-65 71-114 (138)
No 1
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=99.97 E-value=5.5e-30 Score=216.76 Aligned_cols=143 Identities=43% Similarity=0.801 Sum_probs=128.7
Q ss_pred CCCC-CeEEechHHHHHHHHHHHhhcCCCCEEEEEeCCCchhhHHHHhhCCCccEEEeCCccceecCCCCCCCCCCCCCC
Q psy11241 3 ASTG-NLRILDEITSVNKEADRLVREDKVDIVIALSHAGVDLDQTVAKASKHVSIVVGGHSHTFLYSGKPPCPHDKPKGP 81 (148)
Q Consensus 3 s~~~-~v~f~d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d~~la~~~~~iDvIlgGH~H~~~~~~~~~~~~~~~~~~ 81 (148)
++|+ ++.|.|+++++++++++||++ |||+||+|+|+|++.|++||+++++||+|||||+|..+.++..|. ++...++
T Consensus 182 ~~~~~~~~~~d~~~~~~~~v~~l~~~-g~D~iI~l~H~g~~~d~~la~~~~giDlIlgGHtH~~~~~g~~~~-~~~~~g~ 259 (546)
T 4h2g_A 182 SNPGTNLVFEDEITALQPEVDKLKTL-NVNKIIALGHSGFEMDKLIAQKVRGVDVVVGGHSNTFLYTGNPPS-KEVPAGK 259 (546)
T ss_dssp SCCCSSEEECCHHHHHHHHHHHHHHT-TCCCEEEEEESCHHHHHHHHHHSTTCCEEECCSSCCCCCSSSCSS-SCCCSSC
T ss_pred cCCCCCcEEccHHHHHHHHHHHHHhc-CCCEEEEEeccCccchHHHHHhCCCCcEEEeCCcCcccccCCCCc-ccccCCC
Confidence 4566 999999999999999999998 899999999999999999999999999999999999986554333 3556789
Q ss_pred CCEEEecCCCCceEEEEecCccccceeEEEEEEecCCCEEEEeceEEecCCCCCCCHHHHHHhHhhC
Q psy11241 82 YPIVVTSSVDNRQVLVVQAAAYSRYLGLIHLQYNDKGNIVSWRGDPILLDKHIQEGNIVVLFAKRFR 148 (148)
Q Consensus 82 ~p~~v~~~~~g~~~~vvq~g~~g~~lg~l~l~~~~~g~v~~~~~~~i~~~~~~~~D~~i~~~v~~~~ 148 (148)
||.++.+ ++|++++|+|+|+||++||+++|+|+++|+++.+++.++.++..+++||++++++++|+
T Consensus 260 yp~~v~~-~~G~~~~ivqag~~g~~lg~i~l~~d~~g~~~~~~~~~i~~~~~~~~d~~v~~~v~~~~ 325 (546)
T 4h2g_A 260 YPFIVTS-DDGRKVPVVQAYAFGKYLGYLKIEFDERGNVISSHGNPILLDSSIPEDPSIKADINKWR 325 (546)
T ss_dssp SSEEEEC-TTSCEEEEECCCSTTSEEEEEEEEECTTSCEEEEEECCEECCTTSCCCHHHHHHHHHHH
T ss_pred cceEEec-CCCCEEEEEecChhhcEEEEEEEEEecCCcEEEEeeeEEEcCCCCCCCHHHHHHHHHHH
Confidence 9998877 88999999999999999999999999889988888888888888999999999999884
No 2
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=99.97 E-value=4.6e-30 Score=216.25 Aligned_cols=143 Identities=43% Similarity=0.796 Sum_probs=126.6
Q ss_pred CCCC-CeEEechHHHHHHHHHHHhhcCCCCEEEEEeCCCchhhHHHHhhCCCccEEEeCCccceecCCCCCCCCCCCCCC
Q psy11241 3 ASTG-NLRILDEITSVNKEADRLVREDKVDIVIALSHAGVDLDQTVAKASKHVSIVVGGHSHTFLYSGKPPCPHDKPKGP 81 (148)
Q Consensus 3 s~~~-~v~f~d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d~~la~~~~~iDvIlgGH~H~~~~~~~~~~~~~~~~~~ 81 (148)
+++. ++.|.|+++++++++++||++ |||+||+|+|+|++.|.+||++++|||+|||||+|+.+..+..+. .+...++
T Consensus 160 ~~~~~~~~f~d~v~~~~~~v~~Lr~~-g~D~II~LsH~G~~~d~~la~~v~giD~IlgGHsH~~~~~~~~~~-~~~~~g~ 237 (530)
T 4h1s_A 160 SNPGTNLVFEDEITALQPEVDKLKTL-NVNKIIALGHSGFEMDKLIAQKVRGVDVVVGGHSNTFLYTGNPPS-KEVPAGK 237 (530)
T ss_dssp SCCCTTEEECCHHHHHHHHHHHHHHT-TCCCEEEEEESCHHHHHHHHHHSTTCCEEECCSSCCCBCSSSCSS-SCCCSBC
T ss_pred ccCCCCcccCcHHHHHHHHHhhhhhc-CCCEEEEeccCCchHHHHHHhcCCCCCeeccCCccceeeccCCcc-ccccCCC
Confidence 3444 899999999999999999998 899999999999999999999999999999999999986543222 2345678
Q ss_pred CCEEEecCCCCceEEEEecCccccceeEEEEEEecCCCEEEEeceEEecCCCCCCCHHHHHHhHhhC
Q psy11241 82 YPIVVTSSVDNRQVLVVQAAAYSRYLGLIHLQYNDKGNIVSWRGDPILLDKHIQEGNIVVLFAKRFR 148 (148)
Q Consensus 82 ~p~~v~~~~~g~~~~vvq~g~~g~~lg~l~l~~~~~g~v~~~~~~~i~~~~~~~~D~~i~~~v~~~~ 148 (148)
||..+.+ .+|++|+|+|+|+||++||+++|+|+++|+++.....++.++..+++||++++++++|+
T Consensus 238 ~~~~v~~-~~g~~v~ivqag~~g~~lg~i~l~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~v~~~~ 303 (530)
T 4h1s_A 238 YPFIVTS-DDGRKVPVVQAYAFGKYLGYLKIEFDERGNVISSHGNPILLNSSIPEDPSIKADINKWR 303 (530)
T ss_dssp SSEEEEC-TTSCEEEEECCCSTTSEEEEEEEEECTTSCEEEEEECCEECCTTSCCCHHHHHHHHHHH
T ss_pred CCEEEEC-CCCCEEEEEecCcccccceEEEEEEcCCCcEEeeccceeeecccccccHHHHHHHHHHH
Confidence 9998877 89999999999999999999999999888887777788888888999999999998873
No 3
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=99.96 E-value=7.2e-28 Score=203.98 Aligned_cols=141 Identities=30% Similarity=0.528 Sum_probs=125.4
Q ss_pred CCC-CeEEechHHHHHHHHHHHhhcCCCCEEEEEeCCCchhhHHHHhhCCCccEEEeCCccceecCCCCCCCCCCCCCCC
Q psy11241 4 STG-NLRILDEITSVNKEADRLVREDKVDIVIALSHAGVDLDQTVAKASKHVSIVVGGHSHTFLYSGKPPCPHDKPKGPY 82 (148)
Q Consensus 4 ~~~-~v~f~d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d~~la~~~~~iDvIlgGH~H~~~~~~~~~~~~~~~~~~~ 82 (148)
+|+ ++.|.|+++++++++++||++ ++|+||+|+|.|...|+++|+++++||+|||||+|..+..+..| ++...++|
T Consensus 181 ~~~~~~~~~d~~~~~~~~v~~l~~~-~~d~iIvL~H~g~~~d~~la~~~~gvDlIlgGHtH~~~~~~~~~--~~~~~g~~ 257 (552)
T 2z1a_A 181 NPGPTVAFLDPYESAQKAVYELLAK-GVNKIVVLSHLGYGEDLKLARRLVGVQVIVGGHSHTLLGSFPHK--ELSPAGPY 257 (552)
T ss_dssp CCCTTCEECCHHHHHHHHHHHHHHT-TCCCEEEEEESCHHHHHHHHTTCSSCCEEEECSSCCCBSCCSCT--TCCCSBCS
T ss_pred CCCCCcEECCHHHHHHHHHHHHHhc-CCCEEEEEeCCCcchHHHHHHhCCCccEEEeCCcCccccCCCCc--cccccCCC
Confidence 444 899999999999999999987 89999999999999999999999999999999999998643222 34567889
Q ss_pred CEEEecCCCCceEEEEecCccccceeEEEEEEecCCCEEEEeceEEecCCCC-CCCHHHHHHhHhhC
Q psy11241 83 PIVVTSSVDNRQVLVVQAAAYSRYLGLIHLQYNDKGNIVSWRGDPILLDKHI-QEGNIVVLFAKRFR 148 (148)
Q Consensus 83 p~~v~~~~~g~~~~vvq~g~~g~~lg~l~l~~~~~g~v~~~~~~~i~~~~~~-~~D~~i~~~v~~~~ 148 (148)
|.++.+ ++|++|+++|+|+||++||+++|+|+++|+++.++++++.++..+ ++|+++++++++|+
T Consensus 258 p~~v~~-~~g~~~~ivqag~~g~~lg~i~l~~d~~g~v~~~~~~~i~~~~~~~~~d~~v~~~v~~~~ 323 (552)
T 2z1a_A 258 PTVVKN-PEGKDVLVVQAWEWGKVVGLLEVTFDAKGELLAYKGEALLMTPEAAPEDFFAKEALLAYA 323 (552)
T ss_dssp SEEEEC-TTSCEEEEEECCSTTSEEEEEEEEECTTSCEEEEEEEEEECSTTTCCCCHHHHHHHHHHH
T ss_pred ceeEec-CCCCEEEEEecChhhcEEEEEEEEEcCCCCEEEecceEEEeccccCCCCHHHHHHHHHHH
Confidence 998876 788899999999999999999999998889989999999888778 99999999999884
No 4
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=99.95 E-value=2.1e-28 Score=208.45 Aligned_cols=144 Identities=21% Similarity=0.336 Sum_probs=119.4
Q ss_pred CCCC-CeEEechHHHHHHHHHHHhhcCCCCEEEEEeCCCchhhHHHHhhCCCccEEEeCCccceecCCCCCCCCCCCCCC
Q psy11241 3 ASTG-NLRILDEITSVNKEADRLVREDKVDIVIALSHAGVDLDQTVAKASKHVSIVVGGHSHTFLYSGKPPCPHDKPKGP 81 (148)
Q Consensus 3 s~~~-~v~f~d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d~~la~~~~~iDvIlgGH~H~~~~~~~~~~~~~~~~~~ 81 (148)
++|. ++.|.|+++++++++++||++ |||+||+|+|+|++.|++||++++|||+|||||+|..+.+++++..+....++
T Consensus 168 ~~p~~~~~f~d~~~~~~~~v~~lk~~-g~d~iI~l~H~G~~~d~~la~~~~giDlIlgGHtH~~~~~~~~~~~~~~~~~~ 246 (579)
T 3ztv_A 168 SSPGKDVKFYDEIATAQIMANALKQQ-GINKIILLSHAGSEKNIEIAQKVNDIDVIVTGDSHYLYGNDELRSLKLPVIYE 246 (579)
T ss_dssp SCCCTTEEECCHHHHHHHHHHHHHTT-TCCCEEEEEETCHHHHHHHHHHCSSCCEEEECSSCCEEECHHHHHTTCCEEEE
T ss_pred cCCCCCceEcCHHHHHHHHHHHHHhC-CCCEEEEEeccCchhhHHHHHhCCCCCEEEeCCCCccccCccccccCccccCC
Confidence 4454 899999999999999999998 89999999999999999999999999999999999998421111112344567
Q ss_pred CCEEEecCCCCceEEEEecCccccceeEEEEEEecCCCEEEEeceEE-ecCC----------------------------
Q psy11241 82 YPIVVTSSVDNRQVLVVQAAAYSRYLGLIHLQYNDKGNIVSWRGDPI-LLDK---------------------------- 132 (148)
Q Consensus 82 ~p~~v~~~~~g~~~~vvq~g~~g~~lg~l~l~~~~~g~v~~~~~~~i-~~~~---------------------------- 132 (148)
||..+.+ ++|+.|+|+|+|+||++||+++|+|+++|+++.+++.+. .++.
T Consensus 247 ~p~~v~~-~~G~~~~ivqag~~g~~lg~l~l~~d~~g~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (579)
T 3ztv_A 247 YPLEFKN-PNGEPVFVMEGWAYSAVVGDLGVKFSPEGIASITRKIPHVLMSSHKLQVKNSEGKWAELTGDERKKALDTLK 325 (579)
T ss_dssp SSEEEEC-TTSCEEEEEEBCSTTCEEEEEEEEECTTCCEEEEEEEEEEEECSSCCEEECTTSCEEECCHHHHHHHHHHHH
T ss_pred CceEEeC-CCCCEEEEEecChHHheEEEEEEEEeCCCcEEEecCcceeeccccccccccccccceeccchhhhhhhhhhc
Confidence 8988866 889999999999999999999999998899887776542 2121
Q ss_pred ------CCCCCHHHHHHhHhhC
Q psy11241 133 ------HIQEGNIVVLFAKRFR 148 (148)
Q Consensus 133 ------~~~~D~~i~~~v~~~~ 148 (148)
.+++||++++++++|+
T Consensus 326 ~~~~~~~~~~D~~v~~~v~~~~ 347 (579)
T 3ztv_A 326 SMKSISLDDHDAKTDKLIAKYK 347 (579)
T ss_dssp TCTTEEESCCCHHHHHHHHHHH
T ss_pred cccccccCCCCHHHHHHHHHHH
Confidence 2589999999999884
No 5
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=99.95 E-value=1.2e-27 Score=192.53 Aligned_cols=133 Identities=20% Similarity=0.382 Sum_probs=107.3
Q ss_pred CCCeEEechHHHHHHHHHHHhhcCCCCEEEEEeCCCchhhH----------HHHhhCCCccEEEeCCccceecCCCCCCC
Q psy11241 5 TGNLRILDEITSVNKEADRLVREDKVDIVIALSHAGVDLDQ----------TVAKASKHVSIVVGGHSHTFLYSGKPPCP 74 (148)
Q Consensus 5 ~~~v~f~d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d~----------~la~~~~~iDvIlgGH~H~~~~~~~~~~~ 74 (148)
.+++.|.|+++++++++++||++ |||+||+|+|+|++.|. +||++++|||+|||||+|..++...++.
T Consensus 184 ~~~~~~~d~~~~~~~~v~~Lk~~-g~D~II~l~H~G~~~d~~~~~~e~~~~~lA~~v~giD~IigGHsH~~~~~~~~~~- 261 (341)
T 3gve_A 184 EGQVQVQDIVESANETIPKMKAE-GADVIIALAHTGIEKQAQSSGAENAVFDLATKTKGIDAIISGHQHGLFPSAEYAG- 261 (341)
T ss_dssp TTTCEECCHHHHHHHHHHHHHHT-TCSEEEEEECCCCCSSCCCTTCSSCHHHHHHHCSCCCEEEECSSCCEESCGGGTT-
T ss_pred cCceEEcCHHHHHHHHHHHHHhc-CCCEEEEEeccCccccccccccchhHHHHHhcCCCCcEEEECCCCccCCCccccc-
Confidence 35699999999999999999998 99999999999997663 6999999999999999999985421111
Q ss_pred CCCCCCCCCEEEecCCCC--ceEEEEecCccccceeEEEEEEecC-C--CEEEEeceEEecCC-CCCCCHHHHHHhHhhC
Q psy11241 75 HDKPKGPYPIVVTSSVDN--RQVLVVQAAAYSRYLGLIHLQYNDK-G--NIVSWRGDPILLDK-HIQEGNIVVLFAKRFR 148 (148)
Q Consensus 75 ~~~~~~~~p~~v~~~~~g--~~~~vvq~g~~g~~lg~l~l~~~~~-g--~v~~~~~~~i~~~~-~~~~D~~i~~~v~~~~ 148 (148)
+|... + ..| ++++|+|+|+||++||+++|+|+++ | +|...+++.+++.. .+++||+|.+++++|+
T Consensus 262 -------~~~~~-~-~~g~v~~~~vvqag~~g~~lg~idl~~~~~~~~~~v~~~~~~~~pi~~~~~~~D~~i~~~~~~~~ 332 (341)
T 3gve_A 262 -------VAQFN-V-EKGTINGIPVVMPSSWGKYLGVIDLKLEKADGSWKVADSKGSIESIAGNVTSRNETVTNTIQQTH 332 (341)
T ss_dssp -------STTEE-T-TTTEETTEEEEEECSTTSEEEEEEEEEEEETTEEEEEEEEEEEEESTTTCCSCCHHHHHHHHHHH
T ss_pred -------ccccc-c-ccccCCCEEEEeCChhhcEEEEEEEEEEcCCCcEEEEeeeEEEEecccCCCCCCHHHHHHHHHHH
Confidence 11111 1 122 2799999999999999999999875 3 36777788888753 6899999999999873
No 6
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=99.95 E-value=1.9e-27 Score=191.16 Aligned_cols=135 Identities=16% Similarity=0.218 Sum_probs=104.8
Q ss_pred CCCeEEechHHHHHHHHHHHhhcCCCCEEEEEeCCCchhhHH---------HHhhCCCccEEEeCCccceecCCCCCCCC
Q psy11241 5 TGNLRILDEITSVNKEADRLVREDKVDIVIALSHAGVDLDQT---------VAKASKHVSIVVGGHSHTFLYSGKPPCPH 75 (148)
Q Consensus 5 ~~~v~f~d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d~~---------la~~~~~iDvIlgGH~H~~~~~~~~~~~~ 75 (148)
.+++.|.|+++++++++++||++ |||+||+|+|+|++.|.. +|++++|||+|||||+|..++...+...+
T Consensus 178 ~g~~~~~d~~e~~~~~v~~lr~~-g~D~II~l~H~G~~~d~~~~~~en~~~~~~~v~gID~IlgGHsH~~~~~~~~~~~~ 256 (339)
T 3jyf_A 178 NGKVTVNDITETARKYIPEMRAK-GADVVVVVAHSGLSADPYQAMAENSVYYLSQVPGVDAIMFGHAHAVFPGKDFANIK 256 (339)
T ss_dssp TTTEEECCHHHHHHHHHHHHHHT-TCSEEEEEECCCCCCSCCCTTCSCCHHHHTTSTTCCEEEECSSCSEESSGGGTTST
T ss_pred cCCeEEcCHHHHHHHHHHHHHhc-CCCEEEEEeccCccccccccccchhHHHHhhCCCCCEEEeCCCccccccccccccC
Confidence 35799999999999999999998 999999999999976542 46789999999999999998642110000
Q ss_pred CCCCCCCCEEEecCCCCceEEEEecCccccceeEEEEEEec-CCC--EEEEeceEEecC------CCCCCCHHHHHHhHh
Q psy11241 76 DKPKGPYPIVVTSSVDNRQVLVVQAAAYSRYLGLIHLQYND-KGN--IVSWRGDPILLD------KHIQEGNIVVLFAKR 146 (148)
Q Consensus 76 ~~~~~~~p~~v~~~~~g~~~~vvq~g~~g~~lg~l~l~~~~-~g~--v~~~~~~~i~~~------~~~~~D~~i~~~v~~ 146 (148)
..... ...+ | +++|+|+|+||++||+++|+|++ +|+ ++..+++.+++. +.+++|++|.+++++
T Consensus 257 -g~~~~-~g~v-n-----~v~vvqag~~G~~lg~idl~~~~~~g~~~v~~~~~~~~pi~~~~~~~~~v~~D~~i~~~~~~ 328 (339)
T 3jyf_A 257 -GADIA-KGTL-N-----GVPAVMPGMWGDHLGVVDLVLNNDSGKWQVTQSKAEARPIYDAVAKKSLAAEDGKLVSVLKA 328 (339)
T ss_dssp -TEETT-TTEE-T-----TEEEEEECSTTSEEEEEEEEEECTTSSCEEEEEEEEEEESEETTTTEESSCCCHHHHHHHHH
T ss_pred -Ccccc-CccC-C-----CEEEEcCCcccccceEEEEEEEcCCCceEEeeeeEEEEEecccccccccCCCCHHHHHHHHH
Confidence 00000 0123 3 79999999999999999999997 354 667777777762 358999999999998
Q ss_pred hC
Q psy11241 147 FR 148 (148)
Q Consensus 147 ~~ 148 (148)
|+
T Consensus 329 ~~ 330 (339)
T 3jyf_A 329 DH 330 (339)
T ss_dssp HH
T ss_pred HH
Confidence 73
No 7
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=99.92 E-value=2.3e-24 Score=180.98 Aligned_cols=122 Identities=24% Similarity=0.303 Sum_probs=105.8
Q ss_pred CCCeEEechHHHHHHHHHHHhhcCCCCEEEEEeCCCc----------------hhhHHHHhhCCCccEEEeCCccceecC
Q psy11241 5 TGNLRILDEITSVNKEADRLVREDKVDIVIALSHAGV----------------DLDQTVAKASKHVSIVVGGHSHTFLYS 68 (148)
Q Consensus 5 ~~~v~f~d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~----------------~~d~~la~~~~~iDvIlgGH~H~~~~~ 68 (148)
..++.|.|+++++++++++||++ ||+||+|+|+|. ..+.+||+++++||+|||||+|...+
T Consensus 163 ~~g~~~~d~~~~~~~~v~~Lk~~--~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d~~la~~~~giDlIlgGHtH~~~~- 239 (509)
T 3ive_A 163 RVGIEARDEIKWLQRYIDELKGK--VDLTVALIHEGVPARQSSMGGTDVRRALDKDIQTASQVKGLDILITGHAHVGTP- 239 (509)
T ss_dssp CTTEEECCHHHHHHHHHHHHTTT--CSEEEEEEECSSCCCCCCC---CCCCCCHHHHHHHHHCSSCCEEEEESSCCCCS-
T ss_pred CCCCEEcCHHHHHHHHHHHHHhc--CCEEEEEeccCcCCccccccccccccccchHHHHHhcCCCCcEEEeCCcCccCC-
Confidence 46899999999999999999987 999999999994 36789999999999999999998763
Q ss_pred CCCCCCCCCCCCCCCEEEecCCCCceEEEEecCccccceeEEEEEEecCC-CEEEEeceEEec-CCCCCCCHHHHHHhHh
Q psy11241 69 GKPPCPHDKPKGPYPIVVTSSVDNRQVLVVQAAAYSRYLGLIHLQYNDKG-NIVSWRGDPILL-DKHIQEGNIVVLFAKR 146 (148)
Q Consensus 69 ~~~~~~~~~~~~~~p~~v~~~~~g~~~~vvq~g~~g~~lg~l~l~~~~~g-~v~~~~~~~i~~-~~~~~~D~~i~~~v~~ 146 (148)
+|..+ | +++++|+|+||++||+++|+|++++ ++...+++.+++ +..+++||++++++++
T Consensus 240 -------------~~~~~-~-----~~~ivqag~~g~~lg~i~l~~d~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~v~~ 300 (509)
T 3ive_A 240 -------------EPIKV-G-----NTLILSTDSGGIDVGKLVLDYKEKPHNFTVKNFELKTIYADEWKPDQQTKQVIDG 300 (509)
T ss_dssp -------------SCEEE-T-----TEEEECCCSTTSEEEEEEEEECSSTTCEEEEEEEEEECBGGGCCCCHHHHHHHHH
T ss_pred -------------CCeee-C-----CEEEEecChhhceeEEEEEEEECCCCeEEecCCeeEeeecccccchHHHHHHHHH
Confidence 25556 6 7999999999999999999998765 466677777665 4578999999999998
Q ss_pred hC
Q psy11241 147 FR 148 (148)
Q Consensus 147 ~~ 148 (148)
|+
T Consensus 301 ~~ 302 (509)
T 3ive_A 301 WN 302 (509)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 8
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=99.91 E-value=5.6e-24 Score=180.66 Aligned_cols=121 Identities=23% Similarity=0.345 Sum_probs=108.5
Q ss_pred CCeEEechHHHHHHHHHHHhhcCCCCEEEEEeCCCchhhHHHHhhCCCccEEEeCCccceecCCCCCCCCCCCCCCCCEE
Q psy11241 6 GNLRILDEITSVNKEADRLVREDKVDIVIALSHAGVDLDQTVAKASKHVSIVVGGHSHTFLYSGKPPCPHDKPKGPYPIV 85 (148)
Q Consensus 6 ~~v~f~d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d~~la~~~~~iDvIlgGH~H~~~~~~~~~~~~~~~~~~~p~~ 85 (148)
.++.|.++.+++++++++||++ ++|+||+|+|.|++.|.++|+++++||+|||||+|..++. |..
T Consensus 232 ~~~~~~~~~~~~~~~v~~l~~~-~~d~iIvLsH~g~~~d~~la~~~~giDlIlgGHtH~~~~~--------------~~~ 296 (562)
T 2wdc_A 232 EGLSFALDERRLQEAVDKARAE-GANAVVLLSHNGMQLDAALAERIRGIDLILSGHTHDLTPR--------------PWR 296 (562)
T ss_dssp TTEECCCCHHHHHHHHHHHHHT-TCSEEEEEECSCHHHHHHHHTTSSSCCEEEECSSCCCCSS--------------CEE
T ss_pred CCcEEeCHHHHHHHHHHHHHHC-CCCEEEEEeCCCCcchHHHHhcCCCCcEEEeCCCCCCCcc--------------CEE
Confidence 4899999999999999999987 8999999999999999999999999999999999998742 555
Q ss_pred EecCCCCceEEEEecCccccceeEEEEEEecCCCEEEEeceEEecC-CCCCCCHHHHHHhHhhC
Q psy11241 86 VTSSVDNRQVLVVQAAAYSRYLGLIHLQYNDKGNIVSWRGDPILLD-KHIQEGNIVVLFAKRFR 148 (148)
Q Consensus 86 v~~~~~g~~~~vvq~g~~g~~lg~l~l~~~~~g~v~~~~~~~i~~~-~~~~~D~~i~~~v~~~~ 148 (148)
+ | +|+++|+|+||++||+++|+|+ +|+++.++++.+++. ..+++|+++++++++|+
T Consensus 297 ~-~-----~t~vvqag~~g~~lg~i~l~~~-~g~v~~~~~~~~~v~~~~~~~D~~v~~~i~~~~ 353 (562)
T 2wdc_A 297 V-G-----KTWIVAGSAAGKALMRVDLKLW-KGGIANLRVRVLPVLAEHLPKAEDVEAFLKAQL 353 (562)
T ss_dssp E-T-----TEEEEECCSTTCEEEEEEEEEE-TTEEEEEEEEEEECBGGGSCCCHHHHHHHHHHH
T ss_pred E-C-----CEEEEecCccccEEEEEEEEEe-CCcEEEEeeEEEeecccccCCCHHHHHHHHHHH
Confidence 5 6 7999999999999999999997 788888888888764 46899999999998774
No 9
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=99.89 E-value=1.7e-23 Score=176.19 Aligned_cols=116 Identities=16% Similarity=0.197 Sum_probs=100.7
Q ss_pred CCeEEechHHHHHHHHHHHhhcCCCCEEEEEeCCCchhh----------------HHHHhhC-CCccEEEeCCccceecC
Q psy11241 6 GNLRILDEITSVNKEADRLVREDKVDIVIALSHAGVDLD----------------QTVAKAS-KHVSIVVGGHSHTFLYS 68 (148)
Q Consensus 6 ~~v~f~d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d----------------~~la~~~-~~iDvIlgGH~H~~~~~ 68 (148)
.++.|.|+++++++++++|| + +||+||+|+|+|.+.| .+||+++ ++||+|||||+|..+.
T Consensus 177 ~g~~~~d~~~~~~~~v~~l~-~-~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~~~~la~~~~~giDlIlgGHtH~~~~- 253 (527)
T 3qfk_A 177 QSLTFHSAFEILQQYLPEMK-R-HADIIVVCYHGGFEKDLESGTPTEVLTGENEGYAMLEAFSKDIDIFITGHQHRQIA- 253 (527)
T ss_dssp TTEEECCHHHHHHHHHHHHH-H-HCSEEEEEEECCCSBCTTTCCBSSCCSSSCCHHHHHHHHGGGCSEEECCSSCCEEE-
T ss_pred CCcEEcCHHHHHHHHHHHHH-h-CCCEEEEEeCcCcccccccCccccccccchHHHHHHHhcCCCCcEEEECCCCcccc-
Confidence 58999999999999999999 4 5999999999998765 3899999 9999999999999883
Q ss_pred CCCCCCCCCCCCCCCEEEecCCCCceEEEEecCccccceeEEEEEEecC-CCEEEEeceEEecCCCCCCCHHHHHHhHhh
Q psy11241 69 GKPPCPHDKPKGPYPIVVTSSVDNRQVLVVQAAAYSRYLGLIHLQYNDK-GNIVSWRGDPILLDKHIQEGNIVVLFAKRF 147 (148)
Q Consensus 69 ~~~~~~~~~~~~~~p~~v~~~~~g~~~~vvq~g~~g~~lg~l~l~~~~~-g~v~~~~~~~i~~~~~~~~D~~i~~~v~~~ 147 (148)
..+ + +|+|+|+|+||++||+++|+|+++ +.++ .+++++++ .+++||++++++++|
T Consensus 254 ---------------~~v-~-----~~~ivqag~~g~~lg~i~l~~~~~~~~~v-~~~~l~~~--~~~~d~~~~~~v~~~ 309 (527)
T 3qfk_A 254 ---------------ERF-K-----QTAVIQPGTRGTTVGRVVLSTDEYENLSV-ESCELLPV--IDDSTFTIDEDDQHL 309 (527)
T ss_dssp ---------------EEE-T-----TEEEEEECSTTSEEEEEEEEECSSCCEEE-EEEEEEEC--CCCTTCCCCHHHHHH
T ss_pred ---------------eEE-C-----CEEEeccChhhCEEEEEEEEEECCCCeEE-EeEEEEeC--CCCCCHHHHHHHHHH
Confidence 356 6 799999999999999999999876 4444 55566665 689999999999887
Q ss_pred C
Q psy11241 148 R 148 (148)
Q Consensus 148 ~ 148 (148)
+
T Consensus 310 ~ 310 (527)
T 3qfk_A 310 R 310 (527)
T ss_dssp H
T ss_pred H
Confidence 4
No 10
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=99.89 E-value=2.4e-22 Score=168.70 Aligned_cols=136 Identities=21% Similarity=0.335 Sum_probs=102.2
Q ss_pred CCeEEechHHHHHHHHHHHhhcCCCCEEEEEeCCCc----------hhhHHHHhhCCC--ccEEEeCCccceecCCCCCC
Q psy11241 6 GNLRILDEITSVNKEADRLVREDKVDIVIALSHAGV----------DLDQTVAKASKH--VSIVVGGHSHTFLYSGKPPC 73 (148)
Q Consensus 6 ~~v~f~d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~----------~~d~~la~~~~~--iDvIlgGH~H~~~~~~~~~~ 73 (148)
+++.|.|+++++++++++||+++++|+||+|+|.|. ..+.+||+++++ ||+|||||+|..+.....+.
T Consensus 160 ~~~~~~d~~~~~~~~v~~l~~~~~~d~iI~l~H~g~~~~~~~~~~~~~~~~la~~~~~~~iDlilgGHtH~~~~~~~~~~ 239 (516)
T 1hp1_A 160 TDIEFRKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVCMAAENK 239 (516)
T ss_dssp TTEEECCHHHHHHHHHHHHHHHTCCSEEEEEEESCCCGGGCCTTSCCCHHHHHHHSCTTSSSEEECCSSCCBCCEEETTE
T ss_pred CCcEEeCHHHHHHHHHHHHHhcCCCCEEEEEecCCccCCCcccccCchHHHHHHhCCCCceeEEECCCCCcccccCCccc
Confidence 589999999999999999997447999999999998 456889999988 99999999998874200000
Q ss_pred --CCCCCCCC-CCEEEecCCCCceEEEEecCccccceeEEEEEEecCCCEEEEeceEEec---------CCCCCCCHHHH
Q psy11241 74 --PHDKPKGP-YPIVVTSSVDNRQVLVVQAAAYSRYLGLIHLQYNDKGNIVSWRGDPILL---------DKHIQEGNIVV 141 (148)
Q Consensus 74 --~~~~~~~~-~p~~v~~~~~g~~~~vvq~g~~g~~lg~l~l~~~~~g~v~~~~~~~i~~---------~~~~~~D~~i~ 141 (148)
.+..+... .|..+ | +|+|+|+|+||++||+++|+|+ +|++...+++.+++ +..+++||+++
T Consensus 240 ~~~~~~~~~~~~~~~~-~-----~~~iv~ag~~g~~lg~i~l~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~d~~v~ 312 (516)
T 1hp1_A 240 KQVDYVPGTPCKPDQQ-N-----GIWIVQAHEWGKYVGRADFEFR-NGEMKMVNYQLIPVNLKKKRVLYTPEIAENQQMI 312 (516)
T ss_dssp ECSSCCTTSCCCCEEE-T-----TEEEECBCSTTSEEEEEEEEEE-TTEEEEEEEEEEESSCEETTEESSCCCCCCHHHH
T ss_pred cccccCCCccccccCC-C-----CcEEEecChhhhcccEEEEEEE-CCeEEEEecccccccccccceeccCCCCCCHHHH
Confidence 00000000 02233 4 7999999999999999999997 56654444444433 45789999999
Q ss_pred HHhHhhC
Q psy11241 142 LFAKRFR 148 (148)
Q Consensus 142 ~~v~~~~ 148 (148)
+++++|+
T Consensus 313 ~~v~~~~ 319 (516)
T 1hp1_A 313 SLLSPFQ 319 (516)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999874
No 11
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=99.82 E-value=1.5e-20 Score=159.46 Aligned_cols=122 Identities=16% Similarity=0.259 Sum_probs=96.6
Q ss_pred CCCeEEechHHHHH-HHHHHHhhcCCCCEEEEEeCCCch--hh------HHHHhhCCCccE-EEeCCccceecCCCCCCC
Q psy11241 5 TGNLRILDEITSVN-KEADRLVREDKVDIVIALSHAGVD--LD------QTVAKASKHVSI-VVGGHSHTFLYSGKPPCP 74 (148)
Q Consensus 5 ~~~v~f~d~~~~~~-~~v~~lr~~~g~D~iI~lsH~g~~--~d------~~la~~~~~iDv-IlgGH~H~~~~~~~~~~~ 74 (148)
+++++|.|++++++ +++++|+++ +||+||+|+|+|.+ .+ +.||+.++|+|+ |||||+|....
T Consensus 173 ~~~~~~~d~~e~i~~~~v~~l~~~-~~D~IIvL~H~G~~~~~d~~~~~~~~lA~~~~giDilIlgGHtH~~~~------- 244 (557)
T 3c9f_A 173 NSGTRVTPMAETIHEPWFQEALKH-EVDLIIIVGHTPISHNWGEFYQVHQYLRQFFPDTIIQYFGGHSHIRDF------- 244 (557)
T ss_dssp CTTEEECCHHHHTTSHHHHHHTTS-CCSEEEEECSSCCCTTTCHHHHHHHHHHHHCTTSEEEEEECSSCCEEE-------
T ss_pred CCCcEECCHHHHHHHHHHHHHHhc-CCCEEEEecccCccccCccccHHHHHHHHhCCCCCEEEECCCCCCCCc-------
Confidence 56899999999988 499998866 89999999999984 44 679999999995 99999999863
Q ss_pred CCCCCCCCCEEEecCCCCceEEEEecCccccceeEEEEEEecCCCEEE----EeceEEec-------------CCCCCCC
Q psy11241 75 HDKPKGPYPIVVTSSVDNRQVLVVQAAAYSRYLGLIHLQYNDKGNIVS----WRGDPILL-------------DKHIQEG 137 (148)
Q Consensus 75 ~~~~~~~~p~~v~~~~~g~~~~vvq~g~~g~~lg~l~l~~~~~g~v~~----~~~~~i~~-------------~~~~~~D 137 (148)
+... + +++++|+|+||++||+++|+++++|+.+. .+.+.+.. +..+++|
T Consensus 245 --------~~~~-~-----~t~ivqaG~~g~~lG~l~l~~d~~g~~v~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d 310 (557)
T 3c9f_A 245 --------TVFD-S-----LSTGLQSGRYCETVGWTSVNLDKADLNLPVRQRFSRSYIDFNTDSFKYHTNLDKEFDTAKG 310 (557)
T ss_dssp --------EEEE-T-----TEEEEEECSTTSEEEEEEECCSCGGGCCCHHHHEEEEEEESSHHHHHHHHTCSTTCCCHHH
T ss_pred --------ceec-C-----CeEeeeccchhcEEEEEEEEEeCCCCeeeeecccceeeecccccceeecccccccccCCCC
Confidence 1123 5 79999999999999999999987665321 12233322 2347889
Q ss_pred HHHHHHhHhhC
Q psy11241 138 NIVVLFAKRFR 148 (148)
Q Consensus 138 ~~i~~~v~~~~ 148 (148)
+++++++++|+
T Consensus 311 ~~v~~~i~~~~ 321 (557)
T 3c9f_A 311 KLVSKLIRETR 321 (557)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999874
No 12
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=99.37 E-value=3.6e-13 Score=103.97 Aligned_cols=56 Identities=20% Similarity=0.251 Sum_probs=49.8
Q ss_pred EEechHHHHHHHHHHHhhcCCCCEEEEEeCCCchhhHH-HHhhCCC-ccEEEeCCccceecC
Q psy11241 9 RILDEITSVNKEADRLVREDKVDIVIALSHAGVDLDQT-VAKASKH-VSIVVGGHSHTFLYS 68 (148)
Q Consensus 9 ~f~d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d~~-la~~~~~-iDvIlgGH~H~~~~~ 68 (148)
.|.+|.+++++++++|| ||+||+++|+|+..+++ ++..+++ ||+|+|||||.....
T Consensus 120 ~~~~pf~~~~~~v~~lk----~d~IIv~~H~g~tsek~~la~~~dg~Vd~VvGgHTHv~t~d 177 (252)
T 2z06_A 120 PLDDPFRALDRLLEEEK----ADYVLVEVHAEATSEKMALAHYLDGRASAVLGTHTHVPTLD 177 (252)
T ss_dssp CCCCHHHHHHHHHHHCC----CSEEEEEEECSCHHHHHHHHHHHBTTBSEEEEESSCSCBSC
T ss_pred ccCCHHHHHHHHHHHhC----CCEEEEEeCCCcHHHHHHHHHhCCCCeEEEEcCCCCcCCCc
Confidence 58999999999999987 99999999999988865 6766875 999999999998853
No 13
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=99.33 E-value=6.4e-13 Score=102.78 Aligned_cols=56 Identities=16% Similarity=0.198 Sum_probs=49.6
Q ss_pred EEechHHHHHHHHHHHhhcCCCCEEEEEeCCCchhhHH-HHhhCCC-ccEEEeCCccceecC
Q psy11241 9 RILDEITSVNKEADRLVREDKVDIVIALSHAGVDLDQT-VAKASKH-VSIVVGGHSHTFLYS 68 (148)
Q Consensus 9 ~f~d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d~~-la~~~~~-iDvIlgGH~H~~~~~ 68 (148)
.|.||.+++++++++| + ||+||+++|++...+++ |+..+++ ||+|+|||+|.....
T Consensus 123 ~~~~p~~~~~~~v~~l--~--~d~IIv~~H~e~t~Ek~~la~~~dg~vd~VvGgHTHv~~~d 180 (255)
T 1t70_A 123 AVDNPFRTMDALLERD--D--LGTVFVDFHAEATSEKEAMGWHLAGRVAAVIGTHTHVPTAD 180 (255)
T ss_dssp CCSCHHHHHHHHTTCS--S--CCEEEEEEECSCHHHHHHHHHHHTTSSSEEEEESSCSCBSC
T ss_pred cccCHHHHHHHHHHHh--C--CCEEEEEeCCCChHHHHHHHHhCCCCeEEEEeCCCCcCCCc
Confidence 6899999999999988 4 99999999999987755 7777886 999999999999853
No 14
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=99.32 E-value=1.2e-12 Score=102.55 Aligned_cols=57 Identities=16% Similarity=0.176 Sum_probs=48.6
Q ss_pred eEEechHHHHHHHHHHHhhcCCCCEEEEEeCCCchhhHH-HHhhCCC-ccEEEeCCccceecC
Q psy11241 8 LRILDEITSVNKEADRLVREDKVDIVIALSHAGVDLDQT-VAKASKH-VSIVVGGHSHTFLYS 68 (148)
Q Consensus 8 v~f~d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d~~-la~~~~~-iDvIlgGH~H~~~~~ 68 (148)
+.|.+|.++++++++ | + +||+||+++|+|...+++ ++..+++ ||+|+|||+|.....
T Consensus 132 ~~~~~pf~~a~~~v~--~-~-~~diIIv~~H~g~t~Ek~~la~~~dg~VD~VvGgHTHv~t~d 190 (281)
T 1t71_A 132 FKTTNPFKVLKELIL--K-R-DCDLHIVDFHAETTSEKNAFCMAFDGYVTTIFGTHTHVPSAD 190 (281)
T ss_dssp SCBCCHHHHHHHHHT--T-C-CCSEEEEEEECSCHHHHHHHHHHHTTTSSEEEEESSSSCCTT
T ss_pred ccccCHHHHHHHHHh--h-c-CCCEEEEEeCCCchHHHHHHHHhCCCCeEEEEeCCCCcCCCc
Confidence 368889999999988 4 3 699999999999987764 7777875 999999999999853
No 15
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=97.21 E-value=0.0051 Score=49.72 Aligned_cols=99 Identities=12% Similarity=0.201 Sum_probs=57.0
Q ss_pred chHHHHHHHHHHHhhcCCCCEEEEEeCCCchh-------------h---HHHHhhCCCccEEEeCCccceecCCCCCCCC
Q psy11241 12 DEITSVNKEADRLVREDKVDIVIALSHAGVDL-------------D---QTVAKASKHVSIVVGGHSHTFLYSGKPPCPH 75 (148)
Q Consensus 12 d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~-------------d---~~la~~~~~iDvIlgGH~H~~~~~~~~~~~~ 75 (148)
+.++.+++.+++.+++ -..+|+++|..... . .+++++. ++|++++||+|.....
T Consensus 219 ~ql~wL~~~L~~~~~~--~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~~~~~------- 288 (443)
T 2xmo_A 219 GTLDWIKESSALAKKN--GAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEG-AMDFSLSGHIHTQNIR------- 288 (443)
T ss_dssp HHHHHHHHHHHHHHHT--TCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHHHHT-TCCEEEECSSCSCEEE-------
T ss_pred HHHHHHHHHHHHHHHc--CCeEEEEECCCCcccccccccccccccHHHHHHHHHHc-CCeEEEECCcccCchh-------
Confidence 3456667776666654 34578888875321 1 2445555 8999999999987631
Q ss_pred CCCCCCCCEEEecCCCCceEEEEecCccccc-eeEEEEEEecCCCEEEEeceEEec
Q psy11241 76 DKPKGPYPIVVTSSVDNRQVLVVQAAAYSRY-LGLIHLQYNDKGNIVSWRGDPILL 130 (148)
Q Consensus 76 ~~~~~~~p~~v~~~~~g~~~~vvq~g~~g~~-lg~l~l~~~~~g~v~~~~~~~i~~ 130 (148)
.+.+ .+|.+.+.+++|+...+ -+-.-++++.++....+....+.+
T Consensus 289 ---------~~~~-~~g~~~~~i~~gs~~~~p~~y~il~i~~~~~~~~~~~~~l~v 334 (443)
T 2xmo_A 289 ---------SAKS-TDGKEITDIVTNALSVFPHKYGNITYSAKNKNFTYQSQKLDM 334 (443)
T ss_dssp ---------EEEC-TTSCEEEEEECCCTTSTTCEEEEEEEETTTTEEEEEEEECCH
T ss_pred ---------hccc-CCCCceEEEEcCccccCCCCeEEEEEeCCCceEEEEEEEEeH
Confidence 2222 45556777777775432 223345555555433444434433
No 16
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=96.77 E-value=0.0042 Score=46.40 Aligned_cols=37 Identities=11% Similarity=0.070 Sum_probs=26.5
Q ss_pred CCEEEEEeCCCchh----------------hHHHHhhCCCccEEEeCCcccee
Q psy11241 30 VDIVIALSHAGVDL----------------DQTVAKASKHVSIVVGGHSHTFL 66 (148)
Q Consensus 30 ~D~iI~lsH~g~~~----------------d~~la~~~~~iDvIlgGH~H~~~ 66 (148)
.+.+|+++|..... -.+++++.+++|++++||+|...
T Consensus 148 ~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~ 200 (274)
T 3d03_A 148 DKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLT 200 (274)
T ss_dssp TSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCE
T ss_pred CCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCch
Confidence 45688899964311 12455666789999999999876
No 17
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=96.14 E-value=0.011 Score=43.94 Aligned_cols=52 Identities=6% Similarity=-0.061 Sum_probs=34.7
Q ss_pred EEEEEeCCCc-hh-----------h--HHHHhhCCCccEEEeCCccceecCCCCCCCCCCCCCCCCEEEecCCCCceEEE
Q psy11241 32 IVIALSHAGV-DL-----------D--QTVAKASKHVSIVVGGHSHTFLYSGKPPCPHDKPKGPYPIVVTSSVDNRQVLV 97 (148)
Q Consensus 32 ~iI~lsH~g~-~~-----------d--~~la~~~~~iDvIlgGH~H~~~~~~~~~~~~~~~~~~~p~~v~~~~~g~~~~v 97 (148)
.-|+++|.+. .. + .++++..+++|+++.||+|.... ... + ++++
T Consensus 132 ~~i~~~H~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~----------------~~~-~-----~~~~ 189 (252)
T 1nnw_A 132 NEVFGVYGSPINPFDGEVLAEQPTSYYEAIMRPVKDYEMLIVASPMYPVD----------------AMT-R-----YGRV 189 (252)
T ss_dssp EEEEEESSCSSCTTTCCCCSSCCHHHHHHHHGGGTTSSEEEESTTCSEEE----------------EEE-T-----TEEE
T ss_pred cEEEEEcCCCCCCcccccCCCCCHHHHHHHHhcCCCCCEEEECCccccce----------------Eec-C-----CeEE
Confidence 3677888654 11 0 23334445899999999999773 123 4 5888
Q ss_pred EecCcccc
Q psy11241 98 VQAAAYSR 105 (148)
Q Consensus 98 vq~g~~g~ 105 (148)
+.+|+.|.
T Consensus 190 in~Gs~~~ 197 (252)
T 1nnw_A 190 VCPGSVGF 197 (252)
T ss_dssp EEECCSSS
T ss_pred EECCCccC
Confidence 89998763
No 18
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=96.03 E-value=0.011 Score=42.81 Aligned_cols=53 Identities=23% Similarity=0.314 Sum_probs=36.0
Q ss_pred CEEEEEeCCCchhhHHHHhhCCCccEEEeCCccceecCCCCCCCCCCCCCCCCEEEecCCCCceEEEEecCcccc
Q psy11241 31 DIVIALSHAGVDLDQTVAKASKHVSIVVGGHSHTFLYSGKPPCPHDKPKGPYPIVVTSSVDNRQVLVVQAAAYSR 105 (148)
Q Consensus 31 D~iI~lsH~g~~~d~~la~~~~~iDvIlgGH~H~~~~~~~~~~~~~~~~~~~p~~v~~~~~g~~~~vvq~g~~g~ 105 (148)
+.-|+++|.....-.+.+.+..++|+++.||+|.... ... + +++++.+|+.+.
T Consensus 115 ~~~ill~Hg~~~~l~~~~~~~~~~d~vl~GHtH~~~~----------------~~~-~-----~~~~iNpGs~~~ 167 (190)
T 1s3l_A 115 DLKFFITHGHHQSVLEMAIKSGLYDVVIYGHTHERVF----------------EEV-D-----DVLVINPGECCG 167 (190)
T ss_dssp TEEEEEEESCCHHHHHHHHHHSCCSEEEEECSSCCEE----------------EEE-T-----TEEEEECCCSSC
T ss_pred CcEEEEECCChHHHHHHHHhcCCCCEEEECCCCCcce----------------EEE-C-----CEEEEECCcccc
Confidence 4678899976532122233334799999999998763 123 4 689999998775
No 19
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=95.82 E-value=0.03 Score=39.60 Aligned_cols=51 Identities=18% Similarity=0.143 Sum_probs=33.9
Q ss_pred CEEEEEeCCCchh----h---HHHHhhCCCccEEEeCCccceecCCCCCCCCCCCCCCCCEEEecCCCCceEEEEecCcc
Q psy11241 31 DIVIALSHAGVDL----D---QTVAKASKHVSIVVGGHSHTFLYSGKPPCPHDKPKGPYPIVVTSSVDNRQVLVVQAAAY 103 (148)
Q Consensus 31 D~iI~lsH~g~~~----d---~~la~~~~~iDvIlgGH~H~~~~~~~~~~~~~~~~~~~p~~v~~~~~g~~~~vvq~g~~ 103 (148)
+.-|+++|..... . .++++. .++|+++.||+|.... ... + +++++.+|+.
T Consensus 77 ~~~i~~~Hg~~~~~~~~~~~l~~~~~~-~~~d~vi~GHtH~~~~----------------~~~-~-----~~~~inpGs~ 133 (176)
T 3ck2_A 77 STKIIQTHGHLFDINFNFQKLDYWAQE-EEAAICLYGHLHVPSA----------------WLE-G-----KILFLNPGSI 133 (176)
T ss_dssp TEEEEEECSGGGTTTTCSHHHHHHHHH-TTCSEEECCSSCCEEE----------------EEE-T-----TEEEEEECCS
T ss_pred CeEEEEECCCccCCCCCHHHHHHHHHh-cCCCEEEECCcCCCCc----------------EEE-C-----CEEEEECCCC
Confidence 3567888965321 1 223333 5799999999998763 123 4 6888899887
Q ss_pred c
Q psy11241 104 S 104 (148)
Q Consensus 104 g 104 (148)
+
T Consensus 134 ~ 134 (176)
T 3ck2_A 134 S 134 (176)
T ss_dssp S
T ss_pred C
Confidence 7
No 20
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=95.78 E-value=0.035 Score=39.78 Aligned_cols=58 Identities=16% Similarity=0.236 Sum_probs=37.2
Q ss_pred EEEEEeCCCch-hh--HHHHhhC-CCccEEEeCCccceecCCCCCCCCCCCCCCCCEEEecCCCCceEEEEecCcccc-c
Q psy11241 32 IVIALSHAGVD-LD--QTVAKAS-KHVSIVVGGHSHTFLYSGKPPCPHDKPKGPYPIVVTSSVDNRQVLVVQAAAYSR-Y 106 (148)
Q Consensus 32 ~iI~lsH~g~~-~d--~~la~~~-~~iDvIlgGH~H~~~~~~~~~~~~~~~~~~~p~~v~~~~~g~~~~vvq~g~~g~-~ 106 (148)
.-|+++|.... .+ ..+.+.+ .++|+++.||+|.... ... + +++++++|+.+. .
T Consensus 103 ~~i~l~HG~~~~~~~~~~~~~~~~~~~d~vi~GHtH~~~~----------------~~~-~-----~~~~iNpGS~~~~s 160 (178)
T 2kkn_A 103 VTIGMCHGWGAPWDLKDRLLKVFNEKPQVILFGHTHEPED----------------TVK-A-----GVRFLNPGSLAEGS 160 (178)
T ss_dssp EEEEECCSCCCHHHHHHHHHHHSSSCCSEEECCSCSSCCE----------------EEE-T-----TEEEECCCCTTTTE
T ss_pred EEEEEECCCCCCCCHHHHHHHHhccCCCEEEECccCCCCe----------------EEe-C-----CEEEEECCCCCCCe
Confidence 35788996432 11 2233333 5799999999998763 123 4 699999999885 3
Q ss_pred eeEEE
Q psy11241 107 LGLIH 111 (148)
Q Consensus 107 lg~l~ 111 (148)
.+.++
T Consensus 161 y~il~ 165 (178)
T 2kkn_A 161 YAVLE 165 (178)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 33333
No 21
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=95.70 E-value=0.031 Score=40.17 Aligned_cols=51 Identities=18% Similarity=0.237 Sum_probs=32.5
Q ss_pred EEEEEeCCCch----hh---HHHHhhCCCccEEEeCCccceecCCCCCCCCCCCCCCCCEEEecCCCCceEEEEecCccc
Q psy11241 32 IVIALSHAGVD----LD---QTVAKASKHVSIVVGGHSHTFLYSGKPPCPHDKPKGPYPIVVTSSVDNRQVLVVQAAAYS 104 (148)
Q Consensus 32 ~iI~lsH~g~~----~d---~~la~~~~~iDvIlgGH~H~~~~~~~~~~~~~~~~~~~p~~v~~~~~g~~~~vvq~g~~g 104 (148)
.-|+++|.... .. ..+++. .++|+++.||+|.... ... + +++++++|+.+
T Consensus 90 ~~i~l~Hg~~~~~~~~~~~l~~~~~~-~~~d~vi~GHtH~~~~----------------~~~-~-----~~~~inpGS~~ 146 (192)
T 1z2w_A 90 FKIGLIHGHQVIPWGDMASLALLQRQ-FDVDILISGHTHKFEA----------------FEH-E-----NKFYINPGSAT 146 (192)
T ss_dssp EEEEEECSCCCCBTTCHHHHHHHHHH-HSSSEEECCSSCCCEE----------------EEE-T-----TEEEEECCCTT
T ss_pred EEEEEECCCcCCCCCCHHHHHHHHHh-cCCCEEEECCcCcCcc----------------EeE-C-----CEEEEECCccc
Confidence 45788885321 11 233333 5799999999998763 122 4 68888888875
Q ss_pred c
Q psy11241 105 R 105 (148)
Q Consensus 105 ~ 105 (148)
.
T Consensus 147 ~ 147 (192)
T 1z2w_A 147 G 147 (192)
T ss_dssp C
T ss_pred c
Confidence 3
No 22
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=95.24 E-value=0.29 Score=37.19 Aligned_cols=15 Identities=27% Similarity=0.419 Sum_probs=13.4
Q ss_pred CCccEEEeCCcccee
Q psy11241 52 KHVSIVVGGHSHTFL 66 (148)
Q Consensus 52 ~~iDvIlgGH~H~~~ 66 (148)
.++|+++.||+|...
T Consensus 210 ~~v~~v~~GH~H~~~ 224 (330)
T 3ib7_A 210 TDVRAILAGHLHYST 224 (330)
T ss_dssp SSEEEEEECSSSSCE
T ss_pred cCceEEEECCCCCcc
Confidence 379999999999876
No 23
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=95.15 E-value=0.08 Score=38.79 Aligned_cols=52 Identities=17% Similarity=0.230 Sum_probs=33.3
Q ss_pred CEEEEEeCCCch----hh---HHHHhhCCCccEEEeCCccceecCCCCCCCCCCCCCCCCEEEecCCCCceEEEEecCcc
Q psy11241 31 DIVIALSHAGVD----LD---QTVAKASKHVSIVVGGHSHTFLYSGKPPCPHDKPKGPYPIVVTSSVDNRQVLVVQAAAY 103 (148)
Q Consensus 31 D~iI~lsH~g~~----~d---~~la~~~~~iDvIlgGH~H~~~~~~~~~~~~~~~~~~~p~~v~~~~~g~~~~vvq~g~~ 103 (148)
+.-|+++|.... .. ..+++. .++|+++.||+|.... ... + +++++++|+.
T Consensus 113 ~~~i~l~Hg~~~~~~~~~~~l~~~~~~-~~~d~vl~GHtH~~~~----------------~~~-~-----~~~~inpGS~ 169 (215)
T 2a22_A 113 EFKIGLMHGNQVLPWDDPGSLEQWQRR-LDCDILVTGHTHKLRV----------------FEK-N-----GKLFLNPGTA 169 (215)
T ss_dssp TEEEEEECSTTSSSTTCHHHHHHHHHH-HTCSEEEECSSCCCEE----------------EEE-T-----TEEEEECCCS
T ss_pred CeEEEEEcCCccCCCCCHHHHHHHHhh-cCCCEEEECCcCCCcc----------------Eee-C-----CEEEEECCcc
Confidence 356888895421 11 233333 4799999999998762 122 4 6888888887
Q ss_pred cc
Q psy11241 104 SR 105 (148)
Q Consensus 104 g~ 105 (148)
+.
T Consensus 170 ~~ 171 (215)
T 2a22_A 170 TG 171 (215)
T ss_dssp SC
T ss_pred cc
Confidence 54
No 24
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=94.83 E-value=0.084 Score=38.99 Aligned_cols=30 Identities=17% Similarity=0.293 Sum_probs=22.6
Q ss_pred CccEEEeCCccceecCCCCCCCCCCCCCCCCEEEecCCCCceEEEEecCcccc
Q psy11241 53 HVSIVVGGHSHTFLYSGKPPCPHDKPKGPYPIVVTSSVDNRQVLVVQAAAYSR 105 (148)
Q Consensus 53 ~iDvIlgGH~H~~~~~~~~~~~~~~~~~~~p~~v~~~~~g~~~~vvq~g~~g~ 105 (148)
++|+++.||+|... ..+ + +++++++|+.+.
T Consensus 212 ~~~~vl~GH~H~~~-----------------~~~-~-----~~~~in~Gs~~~ 241 (260)
T 2yvt_A 212 NPEVAIVGHVGKGH-----------------ELV-G-----NTIVVNPGEFEE 241 (260)
T ss_dssp CCSEEEECSSCCEE-----------------EEE-T-----TEEEEECCBGGG
T ss_pred CCCEEEECCccCCc-----------------EEe-C-----CEEEEeCCCCCC
Confidence 68999999999322 123 4 688999999876
No 25
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=94.69 E-value=0.2 Score=38.02 Aligned_cols=33 Identities=27% Similarity=0.311 Sum_probs=23.3
Q ss_pred CCccEEEeCCccceecCCCCCCCCCCCCCCCCEEEecCCCCceEEEEecCcccc
Q psy11241 52 KHVSIVVGGHSHTFLYSGKPPCPHDKPKGPYPIVVTSSVDNRQVLVVQAAAYSR 105 (148)
Q Consensus 52 ~~iDvIlgGH~H~~~~~~~~~~~~~~~~~~~p~~v~~~~~g~~~~vvq~g~~g~ 105 (148)
.++|+++.||+|..... ...+ +++++++|+-|.
T Consensus 163 ~~~d~~i~GHtH~~~~~----------------~~~~-----~~~~iNpGSvg~ 195 (270)
T 3qfm_A 163 PPCDIAVYGHIHQQLLR----------------YGTG-----GQLIVNPGSIGQ 195 (270)
T ss_dssp TTCSEEECCSSCSEEEE----------------ECTT-----SCEEEEECCSSS
T ss_pred cCCCEEEECCcCchHhe----------------eccC-----CEEEEECCCccC
Confidence 47999999999977631 1112 578888888764
No 26
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=94.38 E-value=0.1 Score=39.27 Aligned_cols=52 Identities=17% Similarity=0.191 Sum_probs=32.6
Q ss_pred hHHHHHHHHHHHhhcCCCCEEEEEeCCCch-----------hh---HHHHhhCCCccEEEeCCcccee
Q psy11241 13 EITSVNKEADRLVREDKVDIVIALSHAGVD-----------LD---QTVAKASKHVSIVVGGHSHTFL 66 (148)
Q Consensus 13 ~~~~~~~~v~~lr~~~g~D~iI~lsH~g~~-----------~d---~~la~~~~~iDvIlgGH~H~~~ 66 (148)
..+.+++.+++.++. -.-+|+++|.... .. .++.++.++|++++.||+|...
T Consensus 205 q~~wL~~~L~~~~~~--~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~ 270 (322)
T 2nxf_A 205 QLQWLDAVLTLSDHK--QERVLIFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGG 270 (322)
T ss_dssp HHHHHHHHHHHHHHH--TCEEEEEESSCCCTTSSCGGGSCTTHHHHHHHHHTCTTEEEEEECSCTTCE
T ss_pred HHHHHHHHHHHHHhc--CCcEEEEEccCCCCCCCCccccccCHHHHHHHHhcCCCeEEEEcCCcCCCC
Confidence 344555555554432 2357888897542 11 2345556679999999999876
No 27
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=94.03 E-value=0.22 Score=37.32 Aligned_cols=44 Identities=23% Similarity=0.283 Sum_probs=28.3
Q ss_pred HHHHhhcCCCCEEEEEeCCCchh------h-------HHHHhhCCCccEEEeCCcccee
Q psy11241 21 ADRLVREDKVDIVIALSHAGVDL------D-------QTVAKASKHVSIVVGGHSHTFL 66 (148)
Q Consensus 21 v~~lr~~~g~D~iI~lsH~g~~~------d-------~~la~~~~~iDvIlgGH~H~~~ 66 (148)
.+.|++. ....+|+++|..... . ..+.++. ++|++++||+|...
T Consensus 170 ~~~L~~~-~~~~~iv~~H~p~~~~~~~~~~~~~~~~l~~~l~~~-~v~~~l~GH~H~~~ 226 (313)
T 1ute_A 170 KKQLAAA-KEDYVLVAGHYPVWSIAEHGPTHCLVKQLLPLLTTH-KVTAYLCGHDHNLQ 226 (313)
T ss_dssp HHHHHHC-CCSEEEEECSSCSSCCSSSCCCHHHHHHTHHHHHHT-TCSEEEECSSSSEE
T ss_pred HHHHHhC-CCCeEEEEECCCCccCCCCCCcHHHHHHHHHHHHHc-CCcEEEECChhhhh
Confidence 3445544 357899999975421 0 1233444 79999999999643
No 28
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=93.81 E-value=0.074 Score=42.82 Aligned_cols=37 Identities=27% Similarity=0.334 Sum_probs=25.7
Q ss_pred CCCEEEEEeCCCchh--------h-------HHHHhhCCCccEEEeCCcccee
Q psy11241 29 KVDIVIALSHAGVDL--------D-------QTVAKASKHVSIVVGGHSHTFL 66 (148)
Q Consensus 29 g~D~iI~lsH~g~~~--------d-------~~la~~~~~iDvIlgGH~H~~~ 66 (148)
+...+|+++|..+.. . ..|.++. ++|++|+||.|...
T Consensus 276 ~~~w~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~~~ 327 (426)
T 1xzw_A 276 ETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYY-KVDIVFSGHVHSYE 327 (426)
T ss_dssp TCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHT-TCSEEEECSSSSEE
T ss_pred CCCEEEEEeccCceeCCCcccCCCHHHHHHHHHHHHHh-CCCEEEEcChhhhe
Confidence 477899999975421 0 1233443 79999999999865
No 29
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=93.81 E-value=0.13 Score=39.99 Aligned_cols=50 Identities=24% Similarity=0.273 Sum_probs=30.3
Q ss_pred HHHHHHHHhhc--CCCCEEEEEeCCCchh------hHHH------HhhCC-CccEEEeCCcccee
Q psy11241 17 VNKEADRLVRE--DKVDIVIALSHAGVDL------DQTV------AKASK-HVSIVVGGHSHTFL 66 (148)
Q Consensus 17 ~~~~v~~lr~~--~g~D~iI~lsH~g~~~------d~~l------a~~~~-~iDvIlgGH~H~~~ 66 (148)
++...++|+.+ ......|+|+|..... .+.+ +...+ ++|+++.||.|...
T Consensus 169 ~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~~~~~~~~~~v~~~l~~~~~d~v~~GH~H~~~ 233 (336)
T 2q8u_A 169 LESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGIEQGREIIINRALIPSVVDYAALGHIHSFR 233 (336)
T ss_dssp HHHHHHHHHHHHHTCSSEEEEEEESEETTCC--------CCCEECGGGSCTTSSEEEEESCSSCE
T ss_pred HHHHHHHHHHhccCCCCCEEEEECccccCCCCCCCccchhhcccCHHHccccCCEEEEccccCce
Confidence 44555556542 1356889999976532 1111 11233 89999999999875
No 30
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=93.65 E-value=0.14 Score=36.76 Aligned_cols=50 Identities=16% Similarity=-0.000 Sum_probs=32.6
Q ss_pred CEEEEEeCCCchh-------h---HHHHhhCCCccEEEeCCccceecCCCCCCCCCCCCCCCCEEEecCCCCceEEEEec
Q psy11241 31 DIVIALSHAGVDL-------D---QTVAKASKHVSIVVGGHSHTFLYSGKPPCPHDKPKGPYPIVVTSSVDNRQVLVVQA 100 (148)
Q Consensus 31 D~iI~lsH~g~~~-------d---~~la~~~~~iDvIlgGH~H~~~~~~~~~~~~~~~~~~~p~~v~~~~~g~~~~vvq~ 100 (148)
...|+++|..... . .+++++ .++|+++.||+|... ..+ + +++++.+
T Consensus 149 ~~~il~~H~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~GH~H~~~-----------------~~~-~-----~~~~in~ 204 (228)
T 1uf3_A 149 YPKIFLFHTMPYHKGLNEQGSHEVAHLIKT-HNPLLVLVAGKGQKH-----------------EML-G-----ASWVVVP 204 (228)
T ss_dssp CCEEEEESSCBCBTTTBTTSBHHHHHHHHH-HCCSEEEECCSSCEE-----------------EEE-T-----TEEEEEC
T ss_pred CCeEEEEccCcccCCccccCHHHHHHHHHH-hCCCEEEEcccccCc-----------------ccc-C-----CceEEEe
Confidence 3678889976421 1 233333 369999999999322 123 4 6888999
Q ss_pred Cccc
Q psy11241 101 AAYS 104 (148)
Q Consensus 101 g~~g 104 (148)
|+.+
T Consensus 205 Gs~~ 208 (228)
T 1uf3_A 205 GDLS 208 (228)
T ss_dssp CBGG
T ss_pred cccC
Confidence 9876
No 31
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=93.53 E-value=0.14 Score=37.43 Aligned_cols=39 Identities=21% Similarity=0.320 Sum_probs=27.6
Q ss_pred CCccEEEeCCccceecCCCCCCCCCCCCCCCCEEEecCCCCceEEEEecCccc-cceeEEEE
Q psy11241 52 KHVSIVVGGHSHTFLYSGKPPCPHDKPKGPYPIVVTSSVDNRQVLVVQAAAYS-RYLGLIHL 112 (148)
Q Consensus 52 ~~iDvIlgGH~H~~~~~~~~~~~~~~~~~~~p~~v~~~~~g~~~~vvq~g~~g-~~lg~l~l 112 (148)
.+.|+++.||+|... +... + +++++.+|+.+ ..++.+.|
T Consensus 177 ~~~~~vv~GHth~~~----------------~~~~-~-----~~~~in~Gs~~gg~lt~~~l 216 (221)
T 1g5b_A 177 KGADTFIFGHTPAVK----------------PLKF-A-----NQMYIDTGAVFCGNLTLIQV 216 (221)
T ss_dssp BTSSEEEECSSCCSS----------------CEEE-T-----TEEECCCCHHHHSCCCEEEE
T ss_pred cCCCEEEECCCCCcc----------------ceee-C-----CEEEEECCCCcCCceEEEEe
Confidence 468999999999865 2233 4 68899999863 45555554
No 32
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=93.47 E-value=0.043 Score=40.12 Aligned_cols=49 Identities=16% Similarity=0.192 Sum_probs=30.8
Q ss_pred EEEEeCCCchhhHHHHhhCCCccEEEeCCccceecCCCCCCCCCCCCCCCCEEEecCCCCceEEEEecCccc
Q psy11241 33 VIALSHAGVDLDQTVAKASKHVSIVVGGHSHTFLYSGKPPCPHDKPKGPYPIVVTSSVDNRQVLVVQAAAYS 104 (148)
Q Consensus 33 iI~lsH~g~~~d~~la~~~~~iDvIlgGH~H~~~~~~~~~~~~~~~~~~~p~~v~~~~~g~~~~vvq~g~~g 104 (148)
-|+++|........+. .+...|+++.||+|.... ... + +++++++|+.+
T Consensus 124 ~i~l~Hg~~~~~~~l~-~~~~~d~vi~GHtH~~~~----------------~~~-~-----~~~~iNpGs~~ 172 (208)
T 1su1_A 124 RLFLTHGHLFGPENLP-ALNQNDVLVYGHTHLPVA----------------EQR-G-----EIFHFNPGSVS 172 (208)
T ss_dssp EEEEECSSSSBTTBCC-CCCTTCEEECCSSCCCEE----------------EEE-T-----TEEEEECCCSS
T ss_pred EEEEECCCCCCcchhh-hhcCCCEEEECCcccCcc----------------EEe-C-----CEEEEECCCCc
Confidence 4777886543211111 122349999999998763 122 4 68889999887
No 33
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=93.34 E-value=0.14 Score=41.13 Aligned_cols=37 Identities=22% Similarity=0.332 Sum_probs=25.9
Q ss_pred CCCEEEEEeCCCchh-------h--------HHHHhhCCCccEEEeCCcccee
Q psy11241 29 KVDIVIALSHAGVDL-------D--------QTVAKASKHVSIVVGGHSHTFL 66 (148)
Q Consensus 29 g~D~iI~lsH~g~~~-------d--------~~la~~~~~iDvIlgGH~H~~~ 66 (148)
+...+|+++|..+.. + ..+.++ .++|++|+||.|...
T Consensus 269 ~~~~~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsGH~H~y~ 320 (424)
T 2qfp_A 269 ETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVK-YKVDVVFAGHVHAYE 320 (424)
T ss_dssp TCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHH-TTCSEEEECSSSSEE
T ss_pred CCCEEEEEeCcCceecCcccccccHHHHHHHHHHHHH-hCCcEEEECChhhhh
Confidence 477899999975431 0 123344 489999999999843
No 34
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=92.08 E-value=0.24 Score=36.74 Aligned_cols=15 Identities=27% Similarity=0.388 Sum_probs=13.0
Q ss_pred CCccEEEeCCcccee
Q psy11241 52 KHVSIVVGGHSHTFL 66 (148)
Q Consensus 52 ~~iDvIlgGH~H~~~ 66 (148)
.+.|+++.||+|..+
T Consensus 141 ~~~~l~i~GHtH~p~ 155 (246)
T 3rqz_A 141 FDTPLCFVGHTHVPL 155 (246)
T ss_dssp CCSSEEECCSSSSEE
T ss_pred cCCCEEEECCcCccc
Confidence 368999999999876
No 35
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=91.44 E-value=0.27 Score=39.11 Aligned_cols=37 Identities=19% Similarity=0.163 Sum_probs=24.9
Q ss_pred CCEEEEEeCCCchhh----HHH-HhhCCCccEEEeCCcccee
Q psy11241 30 VDIVIALSHAGVDLD----QTV-AKASKHVSIVVGGHSHTFL 66 (148)
Q Consensus 30 ~D~iI~lsH~g~~~d----~~l-a~~~~~iDvIlgGH~H~~~ 66 (148)
....|+|+|.....- ..+ +..++++|+++.||+|...
T Consensus 170 ~~~~Ill~H~~~~~~~~~~~~~~~~~l~~~d~v~~GH~H~~~ 211 (386)
T 3av0_A 170 YKKKILMLHQGINPYIPLDYELEHFDLPKFSYYALGHIHKRI 211 (386)
T ss_dssp CSSEEEEECCCCTTTSSSSCSSCGGGSCCCSEEEECSCCSCE
T ss_pred CCCEEEEECcCccccCCCCcccCHHHhhhCCeEEccCCCCCc
Confidence 457899999865310 001 2345679999999999764
No 36
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=90.41 E-value=0.19 Score=41.21 Aligned_cols=38 Identities=13% Similarity=0.192 Sum_probs=25.9
Q ss_pred CCCEEEEEeCCCchh---hHHHHhhC--CCccEEEeCCcccee
Q psy11241 29 KVDIVIALSHAGVDL---DQTVAKAS--KHVSIVVGGHSHTFL 66 (148)
Q Consensus 29 g~D~iI~lsH~g~~~---d~~la~~~--~~iDvIlgGH~H~~~ 66 (148)
..++.|+++|..... +..+.+.+ .++|+++.||.|...
T Consensus 228 ~~~~~Ilv~H~~~~~~g~~~~ip~~l~~~~~Dyv~lGH~H~~~ 270 (431)
T 3t1i_A 228 NSWFNLFVIHQNRSKHGSTNFIPEQFLDDFIDLVIWGHEHECK 270 (431)
T ss_dssp GGEEEEEEECSCCSCSSSSSSCCGGGSCTTCCEEEECSCCSCE
T ss_pred CCceEEEEECCCccCCCccccCCHhHhhCCCCEEEeccccccc
Confidence 467999999986421 11122222 469999999999876
No 37
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=89.99 E-value=1.6 Score=34.33 Aligned_cols=36 Identities=17% Similarity=0.376 Sum_probs=25.8
Q ss_pred CCEEEEEeCCCchh------hH-------HHHhhCCCccEEEeCCcccee
Q psy11241 30 VDIVIALSHAGVDL------DQ-------TVAKASKHVSIVVGGHSHTFL 66 (148)
Q Consensus 30 ~D~iI~lsH~g~~~------d~-------~la~~~~~iDvIlgGH~H~~~ 66 (148)
++.+|++.|-.+.. +. .|.++. ++|++|+||.|...
T Consensus 190 ~~~~IV~~HhP~~~~~~~~~~~~l~~~l~~ll~~~-~VdlvlsGH~H~~~ 238 (342)
T 3tgh_A 190 ADFIIVVGDQPIYSSGYSRGSSYLAYYLLPLLKDA-EVDLYISGHDNNME 238 (342)
T ss_dssp CSEEEEECSSCSSCSSTTCCCHHHHHHTHHHHHHT-TCCEEEECSSSSEE
T ss_pred CCcEEEEECCCCCCCCCCCCcHHHHHHHHHHHHHc-CCCEEEECCCccee
Confidence 67899999975421 12 233444 89999999999876
No 38
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=87.66 E-value=0.74 Score=35.68 Aligned_cols=34 Identities=21% Similarity=0.160 Sum_probs=22.8
Q ss_pred EEEEeCCCchhhHH--------H-HhhC-CCccEEEeCCcccee
Q psy11241 33 VIALSHAGVDLDQT--------V-AKAS-KHVSIVVGGHSHTFL 66 (148)
Q Consensus 33 iI~lsH~g~~~d~~--------l-a~~~-~~iDvIlgGH~H~~~ 66 (148)
.|+|+|.....-.. + ...+ .++|+++.||.|...
T Consensus 168 ~Ill~H~~~~~~~~~~~~~~~~~~~~~l~~~~dyvalGH~H~~q 211 (333)
T 1ii7_A 168 AILMLHQGVREVSEARGEDYFEIGLGDLPEGYLYYALGHIHKRY 211 (333)
T ss_dssp EEEEEECCBHHHHHTTTCCCCSBCGGGSCTTCSEEEEESCSSCE
T ss_pred eEEEEcCChhhcccccccccceecHHHCCccCCEEEccccccce
Confidence 89999987542111 0 1122 469999999999865
No 39
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=87.47 E-value=0.58 Score=37.18 Aligned_cols=38 Identities=29% Similarity=0.329 Sum_probs=25.0
Q ss_pred CCCEEEEEeCCCchh-----h--HH----H-HhhC-CCccEEEeCCcccee
Q psy11241 29 KVDIVIALSHAGVDL-----D--QT----V-AKAS-KHVSIVVGGHSHTFL 66 (148)
Q Consensus 29 g~D~iI~lsH~g~~~-----d--~~----l-a~~~-~~iDvIlgGH~H~~~ 66 (148)
.....|+|+|..... + +. + +..+ .++|.++.||.|...
T Consensus 165 ~~~~~I~l~H~~v~g~~~~~~se~~~~~~v~~~~~~~~~dyvalGH~H~~q 215 (379)
T 3tho_B 165 KEDFAIFMGHFTVEGLAGYAGIEQGREIIINRALIPSVVDYAALGHIHSFR 215 (379)
T ss_dssp CSSEEEEEEESCBSCCCC-------CSCCBCGGGSCTTSSEEEEESCSSCE
T ss_pred CCCCeEEEEeccccCCccCCCCccccccccCHHHcCcCCCEEEcccccCCe
Confidence 367889999976431 1 11 1 1223 479999999999874
No 40
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=85.43 E-value=0.87 Score=32.34 Aligned_cols=36 Identities=19% Similarity=0.171 Sum_probs=23.2
Q ss_pred CEEEEEeCCCchh---------hHH---HHhhCCCccEEEeCCccceec
Q psy11241 31 DIVIALSHAGVDL---------DQT---VAKASKHVSIVVGGHSHTFLY 67 (148)
Q Consensus 31 D~iI~lsH~g~~~---------d~~---la~~~~~iDvIlgGH~H~~~~ 67 (148)
..-|+++|..... ... ++++ .++|+++.||+|....
T Consensus 106 ~~~i~~~H~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~vi~GHtH~~~~ 153 (195)
T 1xm7_A 106 GKRILLSHYPAKDPITERYPDRQEMVREIYFK-ENCDLLIHGHVHWNRE 153 (195)
T ss_dssp TEEEEEESSCSSCSSCCSCHHHHHHHHHHHHH-TTCSEEEECCCCCCSC
T ss_pred CcEEEEEccCCcCCCcccccchHHHHHHHHHH-cCCcEEEECCcCCCCc
Confidence 3568888865321 122 3333 3699999999998763
No 41
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=84.17 E-value=1.3 Score=34.43 Aligned_cols=33 Identities=12% Similarity=0.009 Sum_probs=24.2
Q ss_pred CCccEEEeCCccceecCCCCCCCCCCCCCCCCEEEecCCCCceEEEEecCcccc
Q psy11241 52 KHVSIVVGGHSHTFLYSGKPPCPHDKPKGPYPIVVTSSVDNRQVLVVQAAAYSR 105 (148)
Q Consensus 52 ~~iDvIlgGH~H~~~~~~~~~~~~~~~~~~~p~~v~~~~~g~~~~vvq~g~~g~ 105 (148)
...++++.||.|..... ..+ + +|+++++|+.+.
T Consensus 245 ~~p~l~v~GH~H~~~~~---------------~~~-g-----~t~vvNpGs~~~ 277 (296)
T 3rl5_A 245 VRPKLHVFGGIHEGYGT---------------MTD-G-----YTTYINASTCTV 277 (296)
T ss_dssp TCCSEEEECSCGGGCEE---------------EEC-S-----SCEEEECBCSCT
T ss_pred cCCCEEEECCccCCCce---------------EEE-C-----CEEEEECCcCCc
Confidence 46899999999987520 112 3 699999998765
No 42
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=71.73 E-value=3.2 Score=33.71 Aligned_cols=37 Identities=16% Similarity=0.205 Sum_probs=25.6
Q ss_pred CCCEEEEEeCCCchhh-------HHHHhhCCCccEEEeCCccceec
Q psy11241 29 KVDIVIALSHAGVDLD-------QTVAKASKHVSIVVGGHSHTFLY 67 (148)
Q Consensus 29 g~D~iI~lsH~g~~~d-------~~la~~~~~iDvIlgGH~H~~~~ 67 (148)
+..+-|+|.|...... ..++. .++|+++.||.|....
T Consensus 209 ~~~~nIlvlH~~~~~~~~~~yip~~l~~--~~~DyvalGH~H~~~~ 252 (417)
T 4fbw_A 209 DEWFNLLTVHQNHSAHTPTSYLPESFIQ--DFYDFVLWGHEHECLI 252 (417)
T ss_dssp TTSEEEEEEESCSSCSSSSSSCCGGGSC--TTCSEEEEESCCSCEE
T ss_pred CCceEEEEecCCccCCCCcccCchhHhh--cCCCEEEecCccccce
Confidence 4668899999865421 11211 5799999999998763
No 43
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=70.51 E-value=12 Score=27.28 Aligned_cols=51 Identities=12% Similarity=0.128 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEEeCCCchhhHHHHhhCCCccEEEeCCcccee
Q psy11241 14 ITSVNKEADRLVREDKVDIVIALSHAGVDLDQTVAKASKHVSIVVGGHSHTFL 66 (148)
Q Consensus 14 ~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d~~la~~~~~iDvIlgGH~H~~~ 66 (148)
-++++..+++.++. |+.-||+-|..|... +++++.+.++.+|+-.|...+.
T Consensus 29 ~~tl~la~era~e~-~Ik~iVVAS~sG~TA-~k~~e~~~~i~lVvVTh~~GF~ 79 (201)
T 1vp8_A 29 EETLRLAVERAKEL-GIKHLVVASSYGDTA-MKALEMAEGLEVVVVTYHTGFV 79 (201)
T ss_dssp HHHHHHHHHHHHHH-TCCEEEEECSSSHHH-HHHHHHCTTCEEEEEECCTTSS
T ss_pred HHHHHHHHHHHHHc-CCCEEEEEeCCChHH-HHHHHHhcCCeEEEEeCcCCCC
Confidence 45666677777766 789999999998653 5566677888999888866554
No 44
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=64.65 E-value=10 Score=28.31 Aligned_cols=50 Identities=16% Similarity=0.080 Sum_probs=30.2
Q ss_pred CCccEEEeCCccceecCCCCCCCCCCCCCCCCEEEecCCCCceEEEEecCcc-ccceeEEEEEEecCCCEEEEe
Q psy11241 52 KHVSIVVGGHSHTFLYSGKPPCPHDKPKGPYPIVVTSSVDNRQVLVVQAAAY-SRYLGLIHLQYNDKGNIVSWR 124 (148)
Q Consensus 52 ~~iDvIlgGH~H~~~~~~~~~~~~~~~~~~~p~~v~~~~~g~~~~vvq~g~~-g~~lg~l~l~~~~~g~v~~~~ 124 (148)
.+.+.|+.||+|..... . . .++ +++.+.+|+. |..|+-+.| +++++..+.
T Consensus 195 ~g~~~vvfGHt~~~~~~----------------~--~-~~~-~~i~IDtG~~~gG~Lt~l~l---~~~~~~~~~ 245 (262)
T 2qjc_A 195 RGPETVVFGHDARRGLQ----------------E--Q-YKP-LAIGLDSRCVYGGRLSAAVF---PGGCIISVP 245 (262)
T ss_dssp CCSSEEEECCCGGGCCB----------------C--T-TTT-TEEECCCBGGGTSEEEEEEE---TTTEEEEEE
T ss_pred CCCCEEEECCCcccccc----------------c--c-CCC-CEEEeeCccccCCeeEEEEE---cCCcEEEEe
Confidence 45789999999986421 1 1 111 4778888875 545555554 345655544
No 45
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=63.95 E-value=9.8 Score=29.91 Aligned_cols=44 Identities=18% Similarity=0.203 Sum_probs=28.8
Q ss_pred HHHHHHHHHhhcCCCCEEEEEeCCCchhhHHHHhhCCCccEEEeC
Q psy11241 16 SVNKEADRLVREDKVDIVIALSHAGVDLDQTVAKASKHVSIVVGG 60 (148)
Q Consensus 16 ~~~~~v~~lr~~~g~D~iI~lsH~g~~~d~~la~~~~~iDvIlgG 60 (148)
...+.++.|.++ |+|+||+.+..-.+.-.++|++.|++-.++..
T Consensus 74 d~~~~l~~l~~~-g~d~Ii~~g~~~~~~~~~vA~~~Pdv~fv~id 117 (356)
T 3s99_A 74 DAERSIKRIARA-GNKLIFTTSFGYMDPTVKVAKKFPDVKFEHAT 117 (356)
T ss_dssp HHHHHHHHHHHT-TCSEEEECSGGGHHHHHHHHTTCTTSEEEEES
T ss_pred HHHHHHHHHHHC-CCCEEEECCHHHHHHHHHHHHHCCCCEEEEEe
Confidence 345567777777 89988887543223335677888887776653
No 46
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=63.28 E-value=6 Score=32.73 Aligned_cols=38 Identities=16% Similarity=0.169 Sum_probs=24.6
Q ss_pred CCEEEEEeCCCchhh---HHHHhh-C-CCccEEEeCCccceec
Q psy11241 30 VDIVIALSHAGVDLD---QTVAKA-S-KHVSIVVGGHSHTFLY 67 (148)
Q Consensus 30 ~D~iI~lsH~g~~~d---~~la~~-~-~~iDvIlgGH~H~~~~ 67 (148)
..+-|++.|...... ..+.+. . .++|+++.||.|....
T Consensus 273 ~~~nIlvlH~~~~~~~~~~yipe~ll~~g~DyValGH~H~~~~ 315 (472)
T 4fbk_A 273 EWFNLLTVHQNHSAHTPTSYLPESFIQDFYDFVLWGHEHECLI 315 (472)
T ss_dssp GEEEEEEEESCSCCSSTTSSCCGGGSCTTCSEEEEESCCSCEE
T ss_pred CceEEEEecCCccCCCccccCChhhhhcCCCEEEecCccccee
Confidence 457788889764321 111111 2 4799999999998763
No 47
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=62.16 E-value=20 Score=23.90 Aligned_cols=32 Identities=13% Similarity=0.198 Sum_probs=25.5
Q ss_pred eEEechHHHHHHHHHHHhhcCCCCEEEEEeCCC
Q psy11241 8 LRILDEITSVNKEADRLVREDKVDIVIALSHAG 40 (148)
Q Consensus 8 v~f~d~~~~~~~~v~~lr~~~g~D~iI~lsH~g 40 (148)
+-|..--+.+++.+.++|.+ |+-++.+.|...
T Consensus 6 vvfssdpeilkeivreikrq-gvrvvllysdqd 37 (162)
T 2l82_A 6 VVFSSDPEILKEIVREIKRQ-GVRVVLLYSDQD 37 (162)
T ss_dssp EEEESCHHHHHHHHHHHHHT-TCEEEEEECCSC
T ss_pred EEecCCHHHHHHHHHHHHhC-CeEEEEEecCch
Confidence 45665558999999999999 898887777654
No 48
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=56.09 E-value=22 Score=26.68 Aligned_cols=45 Identities=20% Similarity=0.300 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEEeCCCchhhHHHHhhCCCccEEEeCCc
Q psy11241 14 ITSVNKEADRLVREDKVDIVIALSHAGVDLDQTVAKASKHVSIVVGGHS 62 (148)
Q Consensus 14 ~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d~~la~~~~~iDvIlgGH~ 62 (148)
...+...++++..+ ++|+||+++ -+..+.+++...++-+|++|-+
T Consensus 55 ~~~~~~~~~~l~~~-~~DlIiai~---t~aa~a~~~~~~~iPVVf~~v~ 99 (302)
T 3lkv_A 55 PAIAVQIARQFVGE-NPDVLVGIA---TPTAQALVSATKTIPIVFTAVT 99 (302)
T ss_dssp HHHHHHHHHHHHTT-CCSEEEEES---HHHHHHHHHHCSSSCEEEEEES
T ss_pred HHHHHHHHHHHHhc-CCcEEEEcC---CHHHHHHHhhcCCCCeEEEecC
Confidence 45677788888887 899988763 3344556666677888888754
No 49
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=53.88 E-value=45 Score=24.39 Aligned_cols=50 Identities=14% Similarity=0.103 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEEeCCCchhhHHHHhhCCCccEEEeCCcccee
Q psy11241 14 ITSVNKEADRLVREDKVDIVIALSHAGVDLDQTVAKASKHVSIVVGGHSHTFL 66 (148)
Q Consensus 14 ~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d~~la~~~~~iDvIlgGH~H~~~ 66 (148)
-++++..+++.++. |++-||+-|..|... +++++.+.+ .+|+-.|...+.
T Consensus 37 ~~tl~la~era~e~-~Ik~iVVASssG~TA-~k~~e~~~~-~lVvVTh~~GF~ 86 (206)
T 1t57_A 37 ERVLELVGERADQL-GIRNFVVASVSGETA-LRLSEMVEG-NIVSVTHHAGFR 86 (206)
T ss_dssp HHHHHHHHHHHHHH-TCCEEEEECSSSHHH-HHHHTTCCS-EEEEECCCTTSS
T ss_pred HHHHHHHHHHHHHc-CCCEEEEEeCCCHHH-HHHHHHccC-CEEEEeCcCCCC
Confidence 45666677777766 788999999988553 455566666 888888866554
No 50
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=52.37 E-value=25 Score=24.20 Aligned_cols=45 Identities=22% Similarity=0.383 Sum_probs=24.3
Q ss_pred HHHHHHHHHhhcCCCCEEEEEeCCCchhh--H----HHHhh-CCCccEEEeCC
Q psy11241 16 SVNKEADRLVREDKVDIVIALSHAGVDLD--Q----TVAKA-SKHVSIVVGGH 61 (148)
Q Consensus 16 ~~~~~v~~lr~~~g~D~iI~lsH~g~~~d--~----~la~~-~~~iDvIlgGH 61 (148)
...+.++.+++. ++|+|.+-+-++.... + .|-+. .+++-+++||.
T Consensus 57 p~e~lv~aa~~~-~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG~ 108 (161)
T 2yxb_A 57 TPEQVAMAAVQE-DVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGGT 108 (161)
T ss_dssp CHHHHHHHHHHT-TCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEEC
T ss_pred CHHHHHHHHHhc-CCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeCC
Confidence 445566666665 6887766555443221 1 22222 23577888884
No 51
>3knu_A TRNA (guanine-N(1)-)-methyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, tRNA methyl transferase; 2.25A {Anaplasma phagocytophilum} PDB: 4ig6_A*
Probab=52.06 E-value=16 Score=27.65 Aligned_cols=45 Identities=16% Similarity=0.276 Sum_probs=27.3
Q ss_pred HHHHHHHhhcCCCCEEEEEeCCCchhhHHHHhhC---CCccEEEeCCcc
Q psy11241 18 NKEADRLVREDKVDIVIALSHAGVDLDQTVAKAS---KHVSIVVGGHSH 63 (148)
Q Consensus 18 ~~~v~~lr~~~g~D~iI~lsH~g~~~d~~la~~~---~~iDvIlgGH~H 63 (148)
.+.++.++++....-||.||=.|-.-++++|+++ +++ ++++||--
T Consensus 89 ~~Al~~~~~~~~~~~vI~lsP~G~~f~Q~~a~eLa~~~~l-illCGrYE 136 (253)
T 3knu_A 89 GRCIDEVLSLHPNTKLMFTSPRGVSFTQDIARQTMNFDNI-TLLCGRFE 136 (253)
T ss_dssp HHHHHHHHHHCTTCEEEEEEEEEEECCHHHHHHHHTCSEE-EEEECCTT
T ss_pred HHHHHHHHhcCCCCcEEEECCCCCccCHHHHHHHhCCCCE-EEEecccc
Confidence 3344444433124578999998877666665544 444 67798853
No 52
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=49.48 E-value=33 Score=25.82 Aligned_cols=42 Identities=12% Similarity=0.045 Sum_probs=24.2
Q ss_pred HHHHHHHhhcCCCCEEEEEeCCCchhhHHHHhhCCCccEEEeC
Q psy11241 18 NKEADRLVREDKVDIVIALSHAGVDLDQTVAKASKHVSIVVGG 60 (148)
Q Consensus 18 ~~~v~~lr~~~g~D~iI~lsH~g~~~d~~la~~~~~iDvIlgG 60 (148)
.+.+..|.++ ++|.||+.+..-.+.-.+++++.|++-+++.+
T Consensus 52 ~~~l~~l~~~-~~dgIi~~~~~~~~~~~~~a~~~p~~p~v~id 93 (318)
T 2fqx_A 52 VPSLSAFADE-NMGLVVACGSFLVEAVIETSARFPKQKFLVID 93 (318)
T ss_dssp HHHHHHHHHT-TCSEEEEESTTTHHHHHHHHHHCTTSCEEEES
T ss_pred HHHHHHHHHc-CCCEEEECChhHHHHHHHHHHHCCCCEEEEEc
Confidence 3456666666 78888877533222223455566676666654
No 53
>3ky7_A TRNA (guanine-N(1)-)-methyltransferase; putative tRNA (guanine-7-)-methyltransferase, structural GEN infectious diseases; 2.35A {Staphylococcus aureus subsp} SCOP: c.116.1.0
Probab=48.63 E-value=15 Score=27.99 Aligned_cols=47 Identities=19% Similarity=0.261 Sum_probs=30.7
Q ss_pred HHHHHHHHHHhhcCCCCEEEEEeCCCchhhHHHHhhC---CCccEEEeCCcc
Q psy11241 15 TSVNKEADRLVREDKVDIVIALSHAGVDLDQTVAKAS---KHVSIVVGGHSH 63 (148)
Q Consensus 15 ~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d~~la~~~---~~iDvIlgGH~H 63 (148)
+-+.+.++.++++ +..-||.||=.|-.-++++|+++ +++ ++++||--
T Consensus 89 ePl~~Al~~~~~~-~~~~vI~lsP~G~~f~Q~~a~eLa~~~~l-illCGrYE 138 (269)
T 3ky7_A 89 EPVFNAMEDLDVT-EQARVILMCPQGEPFSHQKAVELSKADHI-VFICGHYE 138 (269)
T ss_dssp HHHHHHHHHTTCC-TTSEEEEEEEEEEECCHHHHHHHTTCSEE-EEECCCCS
T ss_pred HHHHHHHHHHHhc-CCCcEEEECCCCCccCHHHHHHHHCCCCE-EEEecccc
Confidence 3444555666654 35678999999877676666654 344 57788853
No 54
>1oy5_A TRNA (guanine-N(1)-)-methyltransferase; structural genomics, TRMD, tRNA (M1G37) methyltransferase, B structure funded by NIH; 2.60A {Aquifex aeolicus} SCOP: c.116.1.4
Probab=48.57 E-value=20 Score=27.14 Aligned_cols=31 Identities=16% Similarity=0.341 Sum_probs=22.9
Q ss_pred CEEEEEeCCCchhhHHHHhhC---CCccEEEeCCc
Q psy11241 31 DIVIALSHAGVDLDQTVAKAS---KHVSIVVGGHS 62 (148)
Q Consensus 31 D~iI~lsH~g~~~d~~la~~~---~~iDvIlgGH~ 62 (148)
..||.||=.|-.-++++|+++ +++ ++++||-
T Consensus 84 ~~vI~lsP~G~~f~Q~~a~eLa~~~~l-illCGrY 117 (257)
T 1oy5_A 84 PFVLITEPWGEKLNQKLVNELSKKERI-MIICGRY 117 (257)
T ss_dssp CEEEEECTTBCCCCHHHHHHHHTCSEE-EEEECBT
T ss_pred CeEEEECCCCCcCCHHHHHHHhCCCCE-EEEeccc
Confidence 469999999987776666654 445 6779985
No 55
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=47.23 E-value=21 Score=26.86 Aligned_cols=44 Identities=7% Similarity=0.141 Sum_probs=26.6
Q ss_pred HHHHHhhcCCCCEEEEEeCCCchh------hHHHHhhC--CCccEEEeCCccc
Q psy11241 20 EADRLVREDKVDIVIALSHAGVDL------DQTVAKAS--KHVSIVVGGHSHT 64 (148)
Q Consensus 20 ~v~~lr~~~g~D~iI~lsH~g~~~------d~~la~~~--~~iDvIlgGH~H~ 64 (148)
.++++-+- |+|-++++++-.+.. ...|++-+ .+.|+||.|++..
T Consensus 72 ~lr~ala~-GaD~vi~v~d~~~~~~~~~~~a~~La~~i~~~~~dlVl~G~~s~ 123 (264)
T 1o97_C 72 SLRKCLAK-GADRAVRVWDDAAEGSDAIVVGRILTEVIKKEAPDMVFAGVQSS 123 (264)
T ss_dssp HHHHHHHT-TCSEEEEECCGGGTTCCHHHHHHHHHHHHHHHCCSEEEEESCCT
T ss_pred HHHHHHhc-CCCEEEEEcCcccccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 33444444 899999998754321 12333322 2689999999874
No 56
>3quv_A TRNA (guanine-N(1)-)-methyltransferase; sssgcid, seattle structural genomics center for infectious D ssgcid, tRNA methyltransferase; 1.70A {Mycobacterium abscessus}
Probab=47.21 E-value=16 Score=27.49 Aligned_cols=45 Identities=18% Similarity=0.265 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhhcCCCCEEEEEeCCCchhhHHHHhhC---CCccEEEeCCc
Q psy11241 15 TSVNKEADRLVREDKVDIVIALSHAGVDLDQTVAKAS---KHVSIVVGGHS 62 (148)
Q Consensus 15 ~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d~~la~~~---~~iDvIlgGH~ 62 (148)
+-+.+.++.++++ -.-||.||=.|-.-++++|+++ +.+ ++++||-
T Consensus 68 ePl~~Al~~~~~~--~~~vI~lsP~G~~f~Q~~a~eLa~~~~l-illCGrY 115 (246)
T 3quv_A 68 TVWGDALDEICTS--ETLLVVPTPAGYPFTQETAWQWSTEDHL-VIACGRY 115 (246)
T ss_dssp HHHHHHHHHHCCT--TCEEEEEEEEEEECCHHHHHHHTTCSEE-EEECCBT
T ss_pred HHHHHHHHHHHhc--CCcEEEECCCCCccCHHHHHHHhCCCCE-EEEeccc
Confidence 3444555666654 3578999998877677666654 334 5678885
No 57
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=45.28 E-value=30 Score=25.24 Aligned_cols=47 Identities=19% Similarity=0.204 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEEeCCCchh------hHHHHhhC--CCccEEEeCCcc
Q psy11241 14 ITSVNKEADRLVREDKVDIVIALSHAGVDL------DQTVAKAS--KHVSIVVGGHSH 63 (148)
Q Consensus 14 ~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~------d~~la~~~--~~iDvIlgGH~H 63 (148)
-+++++..+.+ + |.++|++-.|.|+.+ +.+..+++ .|+.++.+-|.-
T Consensus 54 G~TA~k~~e~~--~-~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t~tH~l 108 (201)
T 1vp8_A 54 GDTAMKALEMA--E-GLEVVVVTYHTGFVREGENTMPPEVEEELRKRGAKIVRQSHIL 108 (201)
T ss_dssp SHHHHHHHHHC--T-TCEEEEEECCTTSSSTTCCSSCHHHHHHHHHTTCEEEECCCTT
T ss_pred ChHHHHHHHHh--c-CCeEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEEEeccc
Confidence 45677777766 3 688888888899864 34444444 588888887763
No 58
>3q3v_A Phosphoglycerate kinase; structural genomics, center for structural genomics of infec diseases, csgid, PGK; HET: PGE; 2.15A {Campylobacter jejuni subsp} SCOP: c.86.1.0
Probab=43.48 E-value=19 Score=29.11 Aligned_cols=27 Identities=26% Similarity=0.198 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEEeCCCch
Q psy11241 14 ITSVNKEADRLVREDKVDIVIALSHAGVD 42 (148)
Q Consensus 14 ~~~~~~~v~~lr~~~g~D~iI~lsH~g~~ 42 (148)
+.++-..++.|.++ |+- ||++||+|-+
T Consensus 42 I~aalpTI~~ll~~-Gak-Vil~SHlGRP 68 (403)
T 3q3v_A 42 IRSAIPTIRYCLDN-GCS-VILASHLGRP 68 (403)
T ss_dssp HHHHHHHHHHHHHT-TCE-EEEECCCSCC
T ss_pred HHHHHHHHHHHHHC-CCE-EEEEecCCCC
Confidence 45555567777777 776 9999999975
No 59
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=42.68 E-value=45 Score=21.16 Aligned_cols=10 Identities=30% Similarity=0.192 Sum_probs=7.3
Q ss_pred CCccEEEeCC
Q psy11241 52 KHVSIVVGGH 61 (148)
Q Consensus 52 ~~iDvIlgGH 61 (148)
.++|+|+-|.
T Consensus 108 ~~~dliV~G~ 117 (138)
T 1q77_A 108 KGYELVVWAC 117 (138)
T ss_dssp SCCSEEEECS
T ss_pred cCCCEEEEeC
Confidence 3799988664
No 60
>2wzb_A Phosphoglycerate kinase 1; hereditary hemolytic anemia, transferase, phosphoprotein, KI glycolysis, nucleotide-binding; HET: ADP 3PG; 1.47A {Homo sapiens} PDB: 2wzc_A* 2x13_A* 2x15_A* 2xe6_A* 2xe7_A* 2xe8_A* 2ybe_A* 3c3b_A* 2zgv_A* 3c3a_A* 3c39_A* 3c3c_A* 2wzd_A* 2x14_A* 2y3i_A* 1vjd_A* 1vjc_A* 1kf0_A* 1hdi_A* 2p9t_A* ...
Probab=42.58 E-value=25 Score=28.57 Aligned_cols=28 Identities=18% Similarity=0.202 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEEeCCCch
Q psy11241 14 ITSVNKEADRLVREDKVDIVIALSHAGVD 42 (148)
Q Consensus 14 ~~~~~~~v~~lr~~~g~D~iI~lsH~g~~ 42 (148)
+.++-..++.|-++ |+-.||++||+|-+
T Consensus 39 I~aalpTIk~ll~~-gak~Vil~SHlGRP 66 (416)
T 2wzb_A 39 IKAAVPSIKFCLDN-GAKSVVLMSHLGRP 66 (416)
T ss_dssp HHHHHHHHHHHHHT-TCSEEEEECCCSCC
T ss_pred HHHHHHHHHHHHHC-CCCEEEEEecCCCC
Confidence 45566677777777 88779999999876
No 61
>1qpg_A PGK, 3-phosphoglycerate kinase; phosphotransferase (carboxyl acceptor), acetylation, glycolysis; HET: MAP 3PG; 2.40A {Saccharomyces cerevisiae} SCOP: c.86.1.1 PDB: 3pgk_A*
Probab=42.57 E-value=25 Score=28.51 Aligned_cols=28 Identities=18% Similarity=0.205 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEEeCCCch
Q psy11241 14 ITSVNKEADRLVREDKVDIVIALSHAGVD 42 (148)
Q Consensus 14 ~~~~~~~v~~lr~~~g~D~iI~lsH~g~~ 42 (148)
+.++-..++.|-++ |+-.||++||+|-+
T Consensus 39 I~aalpTIk~ll~~-gak~Vil~SHlGRP 66 (415)
T 1qpg_A 39 IVAALPTIKYVLEH-HPRYVVLASHLGQP 66 (415)
T ss_dssp HHHHHHHHHHHHTT-CCSEEEEECCCSCC
T ss_pred HHHHHHHHHHHHHC-CCCEEEEEecCCCC
Confidence 55666677777777 88779999999977
No 62
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=42.02 E-value=33 Score=25.59 Aligned_cols=43 Identities=12% Similarity=0.169 Sum_probs=26.3
Q ss_pred HHHHhhcCCCCEEEEEe-CCCc----hhh---HHHHhhC--CCccEEEeCCccc
Q psy11241 21 ADRLVREDKVDIVIALS-HAGV----DLD---QTVAKAS--KHVSIVVGGHSHT 64 (148)
Q Consensus 21 v~~lr~~~g~D~iI~ls-H~g~----~~d---~~la~~~--~~iDvIlgGH~H~ 64 (148)
++++-+- |+|-+++++ +-.+ +.. ..|++.+ .++|+||.|++..
T Consensus 72 lr~ala~-GaD~vi~v~~d~~~~~~~~~~~~a~~La~~i~~~~~dlVl~G~~s~ 124 (252)
T 1efp_B 72 LRTALAM-GADRAILVVAADDVQQDIEPLAVAKILAAVARAEGTELIIAGKQAI 124 (252)
T ss_dssp HHHHHHH-TCSEEEEEECCSSTTCCCCHHHHHHHHHHHHHHHTCSEEEEESCCT
T ss_pred HHHHHhc-CCCEEEEEecChhhcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 3333344 899999998 6533 221 2333222 3589999999874
No 63
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=41.44 E-value=40 Score=25.24 Aligned_cols=44 Identities=16% Similarity=0.136 Sum_probs=26.4
Q ss_pred HHHHHhhcCCCCEEEEEe-CC----Cchhh---HHHHhhC--CCccEEEeCCccc
Q psy11241 20 EADRLVREDKVDIVIALS-HA----GVDLD---QTVAKAS--KHVSIVVGGHSHT 64 (148)
Q Consensus 20 ~v~~lr~~~g~D~iI~ls-H~----g~~~d---~~la~~~--~~iDvIlgGH~H~ 64 (148)
.++++-+- |+|-+++++ +- +++.. ..|++.+ .++|+||.|++-.
T Consensus 74 ~lr~ala~-GaD~vi~v~~d~~~~~~~~~~~~A~~La~~i~~~~~dlVl~G~~s~ 127 (255)
T 1efv_B 74 TIRTALAM-GADRGIHVEVPPAEAERLGPLQVARVLAKLAEKEKVDLVLLGKQAI 127 (255)
T ss_dssp HHHHHHHH-TCSEEEEEECCHHHHTTCCHHHHHHHHHHHHHHHTCSEEEEESCCT
T ss_pred HHHHHHhc-CCCEEEEEecChhhcccCCHHHHHHHHHHHHHhcCCCEEEEeCccc
Confidence 33333344 899999998 64 33221 2333222 3589999999874
No 64
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=41.08 E-value=25 Score=25.04 Aligned_cols=19 Identities=16% Similarity=0.405 Sum_probs=9.3
Q ss_pred HHHHHHHHHhhcCCCCEEEE
Q psy11241 16 SVNKEADRLVREDKVDIVIA 35 (148)
Q Consensus 16 ~~~~~v~~lr~~~g~D~iI~ 35 (148)
.++..+++|+++ |+++||.
T Consensus 130 e~~~~i~~l~~~-G~~vvVG 148 (196)
T 2q5c_A 130 EITTLISKVKTE-NIKIVVS 148 (196)
T ss_dssp GHHHHHHHHHHT-TCCEEEE
T ss_pred HHHHHHHHHHHC-CCeEEEC
Confidence 334455555554 5555543
No 65
>1vpe_A Phosphoglycerate kinase; transferase, hyperthermostability, crystal, AMP-PNP, 3-PGA; HET: ANP 3PG; 2.00A {Thermotoga maritima} SCOP: c.86.1.1
Probab=38.35 E-value=26 Score=28.30 Aligned_cols=27 Identities=26% Similarity=0.247 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEEeCCCch
Q psy11241 14 ITSVNKEADRLVREDKVDIVIALSHAGVD 42 (148)
Q Consensus 14 ~~~~~~~v~~lr~~~g~D~iI~lsH~g~~ 42 (148)
+.++-..++.|-++ |+ -||++||+|-+
T Consensus 36 I~a~lpTI~~ll~~-ga-kvil~SHlGRP 62 (398)
T 1vpe_A 36 IRAALPTIKYALEQ-GA-KVILLSHLGRP 62 (398)
T ss_dssp HHHHHHHHHHHHHT-TC-EEEEECCCSCC
T ss_pred HHHHHHHHHHHHHC-CC-EEEEEccCCCC
Confidence 55666677777777 77 49999999976
No 66
>1php_A 3-phosphoglycerate kinase; HET: ADP; 1.65A {Geobacillus stearothermophilus} SCOP: c.86.1.1 PDB: 3b2b_A* 3uwd_A*
Probab=38.32 E-value=26 Score=28.27 Aligned_cols=27 Identities=26% Similarity=0.238 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEEeCCCch
Q psy11241 14 ITSVNKEADRLVREDKVDIVIALSHAGVD 42 (148)
Q Consensus 14 ~~~~~~~v~~lr~~~g~D~iI~lsH~g~~ 42 (148)
+.++-..++.|-++ |+ -||++||+|-+
T Consensus 37 I~aalpTI~~ll~~-ga-kvil~SHlGRP 63 (394)
T 1php_A 37 IRAALPTIRYLIEH-GA-KVILASHLGRP 63 (394)
T ss_dssp HHHHHHHHHHHHHT-TC-EEEEECCCSCC
T ss_pred HHHHHHHHHHHHHC-CC-EEEEEecCCCC
Confidence 55566677777777 77 49999999976
No 67
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=38.20 E-value=36 Score=24.98 Aligned_cols=20 Identities=10% Similarity=0.229 Sum_probs=13.0
Q ss_pred HHHHHHHHHHhhcCCCCEEEE
Q psy11241 15 TSVNKEADRLVREDKVDIVIA 35 (148)
Q Consensus 15 ~~~~~~v~~lr~~~g~D~iI~ 35 (148)
+.++..+++|+++ |+++||.
T Consensus 141 ee~~~~i~~l~~~-G~~vVVG 160 (225)
T 2pju_A 141 EDARGQINELKAN-GTEAVVG 160 (225)
T ss_dssp HHHHHHHHHHHHT-TCCEEEE
T ss_pred HHHHHHHHHHHHC-CCCEEEC
Confidence 5556666666666 6776664
No 68
>4fey_A Phosphoglycerate kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: ADP; 2.30A {Francisella tularensis subsp} PDB: 4ehj_A
Probab=38.12 E-value=19 Score=29.03 Aligned_cols=27 Identities=22% Similarity=0.262 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEEeCCCch
Q psy11241 14 ITSVNKEADRLVREDKVDIVIALSHAGVD 42 (148)
Q Consensus 14 ~~~~~~~v~~lr~~~g~D~iI~lsH~g~~ 42 (148)
+.++-..++.|.++ |+- ||++||+|-+
T Consensus 40 I~a~lpTI~~ll~~-gak-Vil~SHlGRP 66 (395)
T 4fey_A 40 IEAAIPTIQYILDQ-GGA-VILMSHLGRP 66 (395)
T ss_dssp HHHTHHHHHHHHHH-TCE-EEEECCCSCC
T ss_pred HHHHHHHHHHHHHC-CCE-EEEEecCCCC
Confidence 44445566666667 775 9999999987
No 69
>1zmr_A Phosphoglycerate kinase; transferase, glycolysis; 2.40A {Escherichia coli}
Probab=37.75 E-value=27 Score=28.10 Aligned_cols=27 Identities=19% Similarity=0.217 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEEeCCCch
Q psy11241 14 ITSVNKEADRLVREDKVDIVIALSHAGVD 42 (148)
Q Consensus 14 ~~~~~~~v~~lr~~~g~D~iI~lsH~g~~ 42 (148)
+.++-..++.|-++ |+ -||++||+|-+
T Consensus 37 I~aalpTI~~ll~~-ga-kvil~SHlGRP 63 (387)
T 1zmr_A 37 IRASLPTIELALKQ-GA-KVMVTSHLGRP 63 (387)
T ss_dssp HHHHHHHHHHHHHT-TC-EEEEECCCSSC
T ss_pred HHHHHHHHHHHHHC-CC-EEEEEccCCCC
Confidence 45556667777777 77 49999999987
No 70
>1v6s_A Phosphoglycerate kinase; riken structu genomics/proteomics initiative, RSGI, structural genomics, transferase; 1.50A {Thermus thermophilus} SCOP: c.86.1.1 PDB: 2ie8_A
Probab=37.64 E-value=27 Score=28.12 Aligned_cols=27 Identities=22% Similarity=0.218 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEEeCCCch
Q psy11241 14 ITSVNKEADRLVREDKVDIVIALSHAGVD 42 (148)
Q Consensus 14 ~~~~~~~v~~lr~~~g~D~iI~lsH~g~~ 42 (148)
+.++-..++.|-++ |+ -||++||+|-+
T Consensus 35 I~aalpTI~~ll~~-ga-kvil~SHlGRP 61 (390)
T 1v6s_A 35 ILESLPTLRHLLAG-GA-SLVLLSHLGRP 61 (390)
T ss_dssp HHHHHHHHHHHHHT-TC-EEEEECCCSCC
T ss_pred HHHHHHHHHHHHHC-CC-EEEEECCCCCC
Confidence 45566677777777 77 49999999966
No 71
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=37.02 E-value=62 Score=26.67 Aligned_cols=46 Identities=15% Similarity=0.119 Sum_probs=28.3
Q ss_pred HHHHhhcCCCCEEEEEeCCCchh-------------h---------HHHHhhC--CCc--cEEEeCCccceec
Q psy11241 21 ADRLVREDKVDIVIALSHAGVDL-------------D---------QTVAKAS--KHV--SIVVGGHSHTFLY 67 (148)
Q Consensus 21 v~~lr~~~g~D~iI~lsH~g~~~-------------d---------~~la~~~--~~i--DvIlgGH~H~~~~ 67 (148)
-+.|++. .+...|+++|.-+.. | ..|...+ .+| +++|+||.|....
T Consensus 315 ~~~L~~s-~a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~ 386 (527)
T 2yeq_A 315 FNNLGSS-TAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWA 386 (527)
T ss_dssp HHHHHHC-CSSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEE
T ss_pred HHHHhcC-CCCeEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhH
Confidence 3456655 689999998854321 1 1222211 355 4999999998763
No 72
>16pk_A PGK, 3-phosphoglycerate kinase; ternary complex, glycolysis, transferase, bisubstrate, analog; HET: BIS EPE; 1.60A {Trypanosoma brucei} SCOP: c.86.1.1 PDB: 13pk_A*
Probab=37.00 E-value=28 Score=28.28 Aligned_cols=27 Identities=22% Similarity=0.258 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEEeCCCch
Q psy11241 14 ITSVNKEADRLVREDKVDIVIALSHAGVD 42 (148)
Q Consensus 14 ~~~~~~~v~~lr~~~g~D~iI~lsH~g~~ 42 (148)
+.++-..++.|-++ |+ -||++||+|-+
T Consensus 36 I~aalpTI~~ll~~-Ga-kvil~SHlGRP 62 (415)
T 16pk_A 36 IRSALPTLKKVLTE-GG-SCVLMSHLGRP 62 (415)
T ss_dssp HHHHHHHHHHHHHT-TC-EEEEECCCSCC
T ss_pred HHHHHHHHHHHHHC-CC-EEEEEecCCCC
Confidence 45555667777777 77 49999999966
No 73
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=36.92 E-value=76 Score=23.13 Aligned_cols=43 Identities=21% Similarity=0.377 Sum_probs=24.2
Q ss_pred HHHHHHHHHHhhcCCCCEEEEEeCCCchhhHHHHhhCCCccEEEeCC
Q psy11241 15 TSVNKEADRLVREDKVDIVIALSHAGVDLDQTVAKASKHVSIVVGGH 61 (148)
Q Consensus 15 ~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d~~la~~~~~iDvIlgGH 61 (148)
+..+++++.|+++ ++|.||+++. .....+.+...++-+|+.+-
T Consensus 49 ~~~~~~~~~l~~~-~vDgII~~~~---~~~~~~~~~~~~iPvV~~~~ 91 (295)
T 3lft_A 49 SKVATMSKQLVAN-GNDLVVGIAT---PAAQGLASATKDLPVIMAAI 91 (295)
T ss_dssp HHHHHHHHHHTTS-SCSEEEEESH---HHHHHHHHHCSSSCEEEESC
T ss_pred HHHHHHHHHHHhc-CCCEEEECCc---HHHHHHHHcCCCCCEEEEec
Confidence 4455667777766 6887777642 12222333345666777653
No 74
>3oz7_A Phosphoglycerate kinase; transferase, ATP binding, glycolysi malaria parasite; 2.70A {Plasmodium falciparum} SCOP: c.86.1.1 PDB: 1ltk_A* 3oza_A
Probab=35.64 E-value=22 Score=28.86 Aligned_cols=28 Identities=29% Similarity=0.396 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEEeCCCch
Q psy11241 14 ITSVNKEADRLVREDKVDIVIALSHAGVD 42 (148)
Q Consensus 14 ~~~~~~~v~~lr~~~g~D~iI~lsH~g~~ 42 (148)
+.++-..++.|.++ |+--||++||+|-+
T Consensus 42 I~aalpTI~~ll~~-gak~Vil~SHlGRP 69 (417)
T 3oz7_A 42 ITATLPTINHLKKE-GASKIILISHCGRP 69 (417)
T ss_dssp HHTTHHHHHHHHHH-TCSEEEEECCCSCC
T ss_pred HHHHHHHHHHHHHC-CCCEEEEEecCCCC
Confidence 33444456666666 88889999999976
No 75
>1c9k_A COBU, adenosylcobinamide kinase; alpha/beta structure rossmann fold P-loop, transferase; HET: 5GP; 2.20A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1cbu_A
Probab=35.24 E-value=55 Score=23.10 Aligned_cols=45 Identities=22% Similarity=0.328 Sum_probs=33.2
Q ss_pred HHHHHHHHHhhcCCCCEEEEEeCCCchh-----------------hHHHHhhCCCccEEEeCC
Q psy11241 16 SVNKEADRLVREDKVDIVIALSHAGVDL-----------------DQTVAKASKHVSIVVGGH 61 (148)
Q Consensus 16 ~~~~~v~~lr~~~g~D~iI~lsH~g~~~-----------------d~~la~~~~~iDvIlgGH 61 (148)
.+.+.+..|++. .+++|++-.-.|+.. ++.||+..+.+-+++.|.
T Consensus 114 ~~~~ll~~l~~~-~~~~vlVsNEVG~GiVP~~~~~R~frD~~G~lnq~lA~~ad~V~lvvaGi 175 (180)
T 1c9k_A 114 EIQILIAACQRC-PAKVVLVTNEVGMGIVPENRLARHFRDIAGRVNQRLAAAADEVWLVVSGI 175 (180)
T ss_dssp HHHHHHHHHHHC-CSEEEEECCCCCSSCCCSSHHHHHHHHHHHHHHHHHHHHCSEEEEEETTE
T ss_pred HHHHHHHHHHcc-CCCEEEEEccccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
Confidence 455667778877 678888777777641 357888888898888884
No 76
>1ual_A TRNA (guanine-N(1)-)-methyltransferase; spout class, TRMD, tRNA(M1G37)methyltrans tRNA modification; HET: SAH; 1.80A {Haemophilus influenzae} SCOP: c.116.1.4 PDB: 1uak_A* 1uaj_A* 1uam_A* 3axz_A* 1p9p_A*
Probab=33.28 E-value=32 Score=26.31 Aligned_cols=31 Identities=35% Similarity=0.370 Sum_probs=22.9
Q ss_pred CEEEEEeCCCchhhHHHHhhC---CCccEEEeCCc
Q psy11241 31 DIVIALSHAGVDLDQTVAKAS---KHVSIVVGGHS 62 (148)
Q Consensus 31 D~iI~lsH~g~~~d~~la~~~---~~iDvIlgGH~ 62 (148)
.-||.||=.|-.-++++|+++ +++ ++++||-
T Consensus 102 ~~vI~lsP~G~~f~Q~~a~eLa~~~~l-illCGrY 135 (274)
T 1ual_A 102 AKVIYLSPQGRKLDQGGVTELAQNQKL-ILVCGRY 135 (274)
T ss_dssp CEEEEEEEEEEECCHHHHHHHTTCSEE-EEECCCT
T ss_pred CeEEEECCCCCcCCHHHHHHHHCCCCE-EEEeccc
Confidence 479999999987777776655 444 6779984
No 77
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=33.26 E-value=27 Score=25.99 Aligned_cols=16 Identities=19% Similarity=0.351 Sum_probs=6.9
Q ss_pred HHHHHhhcCCCCEEEEE
Q psy11241 20 EADRLVREDKVDIVIAL 36 (148)
Q Consensus 20 ~v~~lr~~~g~D~iI~l 36 (148)
.++.|.++ ++|.||+.
T Consensus 55 ~l~~l~~~-~vdgIi~~ 70 (296)
T 2hqb_A 55 RIKELVDG-GVNLIFGH 70 (296)
T ss_dssp HHHHHHHT-TCCEEEEC
T ss_pred HHHHHHHC-CCCEEEEc
Confidence 33444333 45544443
No 78
>2k9k_A TONB2; metal transport; NMR {Listonella anguillarum}
Probab=32.79 E-value=90 Score=19.42 Aligned_cols=38 Identities=8% Similarity=0.081 Sum_probs=21.9
Q ss_pred EEEEEEecCCCEEEEeceEEecCCCCCCCHHHHHHhHhhC
Q psy11241 109 LIHLQYNDKGNIVSWRGDPILLDKHIQEGNIVVLFAKRFR 148 (148)
Q Consensus 109 ~l~l~~~~~g~v~~~~~~~i~~~~~~~~D~~i~~~v~~~~ 148 (148)
.+.+.++++|++..++. +.-+..-.=|.+..+.+..|+
T Consensus 43 ~v~f~I~~~G~v~~~~v--~~ssg~~~ld~aAl~av~~~~ 80 (106)
T 2k9k_A 43 TLSFTIDTTGKAVDINV--VDANPKRMFEREAMQALKKWK 80 (106)
T ss_dssp EEEEEEETTTEEEEEEE--EEESSSSSSHHHHHHHHHHCC
T ss_pred EEEEEECCCCcEEEEEE--EEcCCcHHHHHHHHHHHHhCC
Confidence 46677788999876543 221112234666666666554
No 79
>2cun_A Phosphoglycerate kinase; structural genomics, tanpaku 3000, structural genomics/proteomics initiative, RSGI, NPPSFA; HET: 3PG; 2.10A {Pyrococcus horikoshii}
Probab=32.75 E-value=31 Score=28.01 Aligned_cols=28 Identities=18% Similarity=0.197 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEEeCCCchh
Q psy11241 14 ITSVNKEADRLVREDKVDIVIALSHAGVDL 43 (148)
Q Consensus 14 ~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~ 43 (148)
+.++-..++.|-++ |+ -||++||+|-+.
T Consensus 35 I~a~lpTI~~ll~~-ga-kVvl~SHlGRPG 62 (410)
T 2cun_A 35 FKAVLPTIRYLIES-GA-KVVIGTHQGKPY 62 (410)
T ss_dssp HHHTHHHHHHHHHT-TC-EEEEECCCSCTT
T ss_pred HHHHHHHHHHHHHC-CC-EEEEEcCCCCCC
Confidence 45555567777677 77 499999999873
No 80
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=32.32 E-value=71 Score=23.90 Aligned_cols=50 Identities=24% Similarity=0.302 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEEeCC---CchhhHHHHhhC--CCccEEEeCCcccee
Q psy11241 14 ITSVNKEADRLVREDKVDIVIALSHA---GVDLDQTVAKAS--KHVSIVVGGHSHTFL 66 (148)
Q Consensus 14 ~~~~~~~v~~lr~~~g~D~iI~lsH~---g~~~d~~la~~~--~~iDvIlgGH~H~~~ 66 (148)
.+.++..++++|++ . |++|+=.-. |..-....++.+ -|+|++-.| .|.+-
T Consensus 15 ~~~v~~~l~~lr~~-~-d~vi~ngen~~~G~g~~~~~~~~l~~~G~D~~T~G-NHefD 69 (252)
T 2z06_A 15 LRAVGLHLPDIRDR-Y-DLVIANGENAARGKGLDRRSYRLLREAGVDLVSLG-NHAWD 69 (252)
T ss_dssp HHHHHHHHHHHGGG-C-SEEEEECTTTTTTSSCCHHHHHHHHHHTCCEEECC-TTTTS
T ss_pred HHHHHHHHHHHHhh-C-CEEEEeCCCccCCCCcCHHHHHHHHhCCCCEEEec-cEeeE
Confidence 56788999999998 5 988776542 222224444443 489998766 56643
No 81
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=31.87 E-value=33 Score=26.97 Aligned_cols=28 Identities=7% Similarity=0.223 Sum_probs=23.3
Q ss_pred chHHHHHHHHHHHhhcCCCCEEEEEeCCC
Q psy11241 12 DEITSVNKEADRLVREDKVDIVIALSHAG 40 (148)
Q Consensus 12 d~~~~~~~~v~~lr~~~g~D~iI~lsH~g 40 (148)
...+.+.+.++.+|+. +||+||++.-..
T Consensus 72 p~~~~v~~~~~~~~~~-~~D~IIavGGGs 99 (364)
T 3iv7_A 72 VPIEVAERARAVATDN-EIDLLVCVGGGS 99 (364)
T ss_dssp CBHHHHHHHHHHHHHT-TCCEEEEEESHH
T ss_pred CCHHHHHHHHHHHHhc-CCCEEEEeCCcH
Confidence 3578899999999988 899999997643
No 82
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=31.75 E-value=1.1e+02 Score=20.21 Aligned_cols=46 Identities=13% Similarity=0.176 Sum_probs=29.0
Q ss_pred echHHHHHHHHHHHhhcCCCCEEEEEeCCCchhhHHHHh-h--CCCccEEE
Q psy11241 11 LDEITSVNKEADRLVREDKVDIVIALSHAGVDLDQTVAK-A--SKHVSIVV 58 (148)
Q Consensus 11 ~d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d~~la~-~--~~~iDvIl 58 (148)
+|-.+.++..+.+.|+. |+.+.|+...-.-+. ++-|+ + .+|+|+--
T Consensus 86 tddkewikdfieeaker-gvevfvvynnkdddr-rkeaqqefrsdgvdvrt 134 (162)
T 2l82_A 86 TDDKEWIKDFIEEAKER-GVEVFVVYNNKDDDR-RKEAQQEFRSDGVDVRT 134 (162)
T ss_dssp CCCHHHHHHHHHHHHHT-TCEEEEEEECSCHHH-HHHHHHHHCCSSCEEEE
T ss_pred cCcHHHHHHHHHHHHhc-CcEEEEEecCCCchh-HHHHHHHhhhcCceeee
Confidence 56677888888888877 888887776654322 22232 2 36677643
No 83
>3rxy_A NIF3 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, NIF3 superfamily, unknown function; 2.00A {Sphaerobacter thermophilus}
Probab=31.33 E-value=64 Score=24.73 Aligned_cols=41 Identities=17% Similarity=0.222 Sum_probs=21.9
Q ss_pred HHHHHhhcCCCCEEEEEeCCCchhhHHHHhhCCCccEEEeCCcc
Q psy11241 20 EADRLVREDKVDIVIALSHAGVDLDQTVAKASKHVSIVVGGHSH 63 (148)
Q Consensus 20 ~v~~lr~~~g~D~iI~lsH~g~~~d~~la~~~~~iDvIlgGH~H 63 (148)
+++++.+. |+|.+|. .|.+...-+..|++. ++.+|+.||.-
T Consensus 212 ~i~~a~~~-GvDt~IT-Ge~~~~~~~~~A~E~-ginVI~AGHyA 252 (278)
T 3rxy_A 212 VARAYFDH-GVRTVLY-IHIAPEEAERLRREG-GGNLIVTGHIA 252 (278)
T ss_dssp HHHHHHHT-TCCEEEE-SCCCHHHHHHHHHHC-SSEEEECCHHH
T ss_pred HHHHHHHc-CCCEEEE-ecCchHHHHHHHHHc-CCeEEEeccch
Confidence 44444555 6776654 233322222455543 67777777754
No 84
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=30.02 E-value=1e+02 Score=22.75 Aligned_cols=45 Identities=7% Similarity=0.092 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEEeCCCchhh-----HHHHhhCCCccEEEe
Q psy11241 14 ITSVNKEADRLVREDKVDIVIALSHAGVDLD-----QTVAKASKHVSIVVG 59 (148)
Q Consensus 14 ~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d-----~~la~~~~~iDvIlg 59 (148)
.+.+++.+++|++. |.+++.+-....-.++ .++.+++..||+++-
T Consensus 41 ~~~~~~~~~~i~~~-g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVN 90 (254)
T 4fn4_A 41 EDRLNQIVQELRGM-GKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCN 90 (254)
T ss_dssp HHHHHHHHHHHHHT-TCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 36678888888877 7777766666654443 234455678999994
No 85
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=29.57 E-value=39 Score=26.39 Aligned_cols=27 Identities=11% Similarity=0.201 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHHhhcCCCCEEEEEeCCC
Q psy11241 13 EITSVNKEADRLVREDKVDIVIALSHAG 40 (148)
Q Consensus 13 ~~~~~~~~v~~lr~~~g~D~iI~lsH~g 40 (148)
..+.+.+.++.+|+. +||+||++.-..
T Consensus 72 ~~~~v~~~~~~~~~~-~~D~IIavGGGs 98 (353)
T 3hl0_A 72 PVEVTKTAVEAYRAA-GADCVVSLGGGS 98 (353)
T ss_dssp BHHHHHHHHHHHHHT-TCSEEEEEESHH
T ss_pred cHHHHHHHHHHHhcc-CCCEEEEeCCcH
Confidence 567888888888887 899998887643
No 86
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=29.35 E-value=1e+02 Score=22.47 Aligned_cols=42 Identities=21% Similarity=0.343 Sum_probs=22.7
Q ss_pred HHHHHHHHHHhhcCCCCEEEEEeCCCchhhHHHHhhCCCccEEEeC
Q psy11241 15 TSVNKEADRLVREDKVDIVIALSHAGVDLDQTVAKASKHVSIVVGG 60 (148)
Q Consensus 15 ~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d~~la~~~~~iDvIlgG 60 (148)
+..++.++.|+++ ++|.||+++. .....+.+...++-+|+.+
T Consensus 56 ~~~~~~~~~l~~~-~vDgII~~~~---~~~~~~~~~~~~iPvV~~~ 97 (302)
T 2qh8_A 56 AIAVQIARQFVGE-NPDVLVGIAT---PTAQALVSATKTIPIVFTA 97 (302)
T ss_dssp HHHHHHHHHHHHT-CCSEEEEESH---HHHHHHHHHCSSSCEEEEE
T ss_pred HHHHHHHHHHHhC-CCCEEEECCh---HHHHHHHhcCCCcCEEEEe
Confidence 4445566666665 6777777642 1122233334556666665
No 87
>1u07_A TONB protein; beta-hairpin, protein transport; 1.13A {Escherichia coli} SCOP: d.212.1.2 PDB: 2gsk_B* 1ihr_A 1qxx_A
Probab=28.97 E-value=85 Score=18.94 Aligned_cols=37 Identities=8% Similarity=0.007 Sum_probs=20.6
Q ss_pred EEEEEEecCCCEEEEeceEEecCCCCCCCHHHHHHhHhh
Q psy11241 109 LIHLQYNDKGNIVSWRGDPILLDKHIQEGNIVVLFAKRF 147 (148)
Q Consensus 109 ~l~l~~~~~g~v~~~~~~~i~~~~~~~~D~~i~~~v~~~ 147 (148)
.+.+.++++|++.+.+. +.-+..-.=|.+..+.+..|
T Consensus 28 ~v~~~i~~~G~v~~~~v--~~ssg~~~ld~aa~~av~~~ 64 (90)
T 1u07_A 28 KVKFDVTPDGRVDNVQI--LSAKPANMFEREVKNAMRRW 64 (90)
T ss_dssp EEEEEECTTSCEEEEEE--EEEESSSSSHHHHHHHHTTC
T ss_pred EEEEEECCCCCEEEEEE--EecCCcHHHHHHHHHHHHhC
Confidence 36677788999876543 11111112366666666655
No 88
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=28.73 E-value=37 Score=26.62 Aligned_cols=27 Identities=19% Similarity=0.232 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHHhhcCCCCEEEEEeCCC
Q psy11241 13 EITSVNKEADRLVREDKVDIVIALSHAG 40 (148)
Q Consensus 13 ~~~~~~~~v~~lr~~~g~D~iI~lsH~g 40 (148)
..+.+.+.++.+|+. +||+||++.-..
T Consensus 74 ~~~~v~~~~~~~~~~-~~D~IIavGGGs 100 (358)
T 3jzd_A 74 PIESARDATARAREA-GADCAVAVGGGS 100 (358)
T ss_dssp BHHHHHHHHHHHHHH-TCSEEEEEESHH
T ss_pred CHHHHHHHHHHhhcc-CCCEEEEeCCcH
Confidence 567888888888887 899999987643
No 89
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=28.40 E-value=45 Score=26.41 Aligned_cols=37 Identities=24% Similarity=0.379 Sum_probs=25.4
Q ss_pred chHHHHHHHHHHHhhcCCCCEEEEEeCCC-chhhHHHHh
Q psy11241 12 DEITSVNKEADRLVREDKVDIVIALSHAG-VDLDQTVAK 49 (148)
Q Consensus 12 d~~~~~~~~v~~lr~~~g~D~iI~lsH~g-~~~d~~la~ 49 (148)
...+.+.+.++.+|+. +||+||++.-.. ++..+-+|.
T Consensus 85 p~~~~v~~~~~~~~~~-~~D~IIavGGGsviD~AK~iA~ 122 (407)
T 1vlj_A 85 PVLSKVHEAVEVAKKE-KVEAVLGVGGGSVVDSAKAVAA 122 (407)
T ss_dssp CBHHHHHHHHHHHHHT-TCSEEEEEESHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc-CCCEEEEeCChhHHHHHHHHHH
Confidence 4578888888888887 799999886532 333344443
No 90
>2kpo_A Rossmann 2X2 fold protein; de novo designed, rossmann fold, NESG, GFT structural G PSI-2, protein structure initiative; NMR {Artificial gene}
Probab=27.73 E-value=87 Score=19.51 Aligned_cols=45 Identities=13% Similarity=0.301 Sum_probs=28.3
Q ss_pred chHHHHHHHHHHHhhcC-CCCEEEEEeCC-CchhhHHHHhhCCCccEE
Q psy11241 12 DEITSVNKEADRLVRED-KVDIVIALSHA-GVDLDQTVAKASKHVSIV 57 (148)
Q Consensus 12 d~~~~~~~~v~~lr~~~-g~D~iI~lsH~-g~~~d~~la~~~~~iDvI 57 (148)
..-+.++++..+.|.+- ..-++|++|.. .++..++||+.+ +||+-
T Consensus 33 ktedelkkyleefrkesqnikvlilvsndeeldkakelaqkm-eidvr 79 (110)
T 2kpo_A 33 KTEDELKKYLEEFRKESQNIKVLILVSNDEELDKAKELAQKM-EIDVR 79 (110)
T ss_dssp CSHHHHHHHHHHHTSSTTSEEEEEEESSHHHHHHHHHHHHHT-TCCEE
T ss_pred ccHHHHHHHHHHHHhhccCeEEEEEEcChHHHHHHHHHHHhh-ceeee
Confidence 34567888999998751 45556666653 122346788775 67764
No 91
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=27.71 E-value=1.2e+02 Score=22.10 Aligned_cols=55 Identities=9% Similarity=-0.018 Sum_probs=37.2
Q ss_pred CeEEechHHHHHHHHHHHhhcCCCCEEEEEeCCCchhhHHHHhh-C--CCccEEEeCC
Q psy11241 7 NLRILDEITSVNKEADRLVREDKVDIVIALSHAGVDLDQTVAKA-S--KHVSIVVGGH 61 (148)
Q Consensus 7 ~v~f~d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d~~la~~-~--~~iDvIlgGH 61 (148)
.+-|.-+.+.+.+.+.++..+.+.+.-|-+-..++++...+|++ + .+.|+|++..
T Consensus 14 ~ii~i~~~~~L~~~~~~i~~e~~~~~~I~vi~~~le~av~~a~~~~~~~~~dVIISRG 71 (225)
T 2pju_A 14 PVIWTVSVTRLFELFRDISLEFDHLANITPIQLGFEKAVTYIRKKLANERCDAIIAAG 71 (225)
T ss_dssp CEEEEECCHHHHHHHHHHHTTTTTTCEEEEECCCHHHHHHHHHHHTTTSCCSEEEEEH
T ss_pred CEEEEEchHHHHHHHHHHHHhhCCCceEEEecCcHHHHHHHHHHHHhcCCCeEEEeCC
Confidence 56777778888888888877634444555555667766666655 3 3599999543
No 92
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=27.65 E-value=89 Score=23.66 Aligned_cols=52 Identities=13% Similarity=0.187 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEEeCCCchhh-------HHHHhhCCCcc-EEEeCCcccee
Q psy11241 14 ITSVNKEADRLVREDKVDIVIALSHAGVDLD-------QTVAKASKHVS-IVVGGHSHTFL 66 (148)
Q Consensus 14 ~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d-------~~la~~~~~iD-vIlgGH~H~~~ 66 (148)
.+.+.++++++.+- |||.|.+---.|...- ..+.+.+|+++ +.|+-|.|..+
T Consensus 149 ~~~~~~~~~~~~~~-G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~ 208 (293)
T 3ewb_X 149 RAFLIEAVQTAIDA-GATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHCHDDL 208 (293)
T ss_dssp HHHHHHHHHHHHHT-TCCEEEEECSSSCCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCTT
T ss_pred HHHHHHHHHHHHHc-CCCEEEecCCCCCCCHHHHHHHHHHHHHhcCCccCceEEEEeCCCc
Confidence 46677778888877 8998776666776432 24555678775 78899999776
No 93
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=26.93 E-value=1.5e+02 Score=23.29 Aligned_cols=49 Identities=16% Similarity=0.175 Sum_probs=31.4
Q ss_pred hHHHHHHHHHHHhhcCCCCEEEEEeCCCchh---h------HHHHhhCCCccEEEeCCc
Q psy11241 13 EITSVNKEADRLVREDKVDIVIALSHAGVDL---D------QTVAKASKHVSIVVGGHS 62 (148)
Q Consensus 13 ~~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~---d------~~la~~~~~iDvIlgGH~ 62 (148)
.++.+...++.+++. |++++++-.-.+|+. + ..|.+.++++-+.+.+|+
T Consensus 159 t~~Ei~~Ave~i~~~-G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpVg~sdHt 216 (349)
T 2wqp_A 159 SIESIKKSVEIIREA-GVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHT 216 (349)
T ss_dssp CHHHHHHHHHHHHHH-TCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEEEEECCS
T ss_pred CHHHHHHHHHHHHHc-CCCEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCEEeCCCC
Confidence 356666777788887 788777644455543 1 234445557777888887
No 94
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=26.79 E-value=97 Score=21.60 Aligned_cols=32 Identities=22% Similarity=0.319 Sum_probs=16.1
Q ss_pred echHHHHHHHHHHHhhcCCCCEEEEEeCCCch
Q psy11241 11 LDEITSVNKEADRLVREDKVDIVIALSHAGVD 42 (148)
Q Consensus 11 ~d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~~ 42 (148)
.|-.+.+++.+.++-++.++|+||.-.-.|..
T Consensus 63 ~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g 94 (178)
T 2pjk_A 63 PDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp CSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 34445555555544332246666655555543
No 95
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=26.70 E-value=57 Score=23.62 Aligned_cols=42 Identities=14% Similarity=0.159 Sum_probs=26.5
Q ss_pred HHHHhhcCCCCEEEEEeCCCchh---h---H---HHHhhCCCccEEEeCCccc
Q psy11241 21 ADRLVREDKVDIVIALSHAGVDL---D---Q---TVAKASKHVSIVVGGHSHT 64 (148)
Q Consensus 21 v~~lr~~~g~D~iI~lsH~g~~~---d---~---~la~~~~~iDvIlgGH~H~ 64 (148)
++++.+- |+|-++++.+-.+.. + . +++++ .+.|+||.|++..
T Consensus 52 ~~~~~~~-Gad~v~~v~~~~~~~~~~~~~a~~l~~~i~~-~~p~~Vl~g~t~~ 102 (217)
T 3ih5_A 52 EKQILPY-GVDKLHVFDAEGLYPYTSLPHTSILVNLFKE-EQPQICLMGATVI 102 (217)
T ss_dssp HHHHGGG-TCSEEEEEECGGGSSCCHHHHHHHHHHHHHH-HCCSEEEEECSHH
T ss_pred HHHHHhc-CCCEEEEecCcccccCCHHHHHHHHHHHHHh-cCCCEEEEeCCcc
Confidence 4445555 899999998854331 1 2 23333 2579999999863
No 96
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=26.66 E-value=56 Score=25.58 Aligned_cols=27 Identities=22% Similarity=0.330 Sum_probs=23.3
Q ss_pred chHHHHHHHHHHHhhcCCCCEEEEEeCC
Q psy11241 12 DEITSVNKEADRLVREDKVDIVIALSHA 39 (148)
Q Consensus 12 d~~~~~~~~v~~lr~~~g~D~iI~lsH~ 39 (148)
...+.+.+.++.+|+. +||+||++.-.
T Consensus 76 p~~~~v~~~~~~~~~~-~~d~IIavGGG 102 (387)
T 3bfj_A 76 PKDTNVRDGLAVFRRE-QCDIIVTVGGG 102 (387)
T ss_dssp CBHHHHHHHHHHHHHT-TCCEEEEEESH
T ss_pred CCHHHHHHHHHHHHhc-CCCEEEEeCCc
Confidence 4688999999999988 89999999764
No 97
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=26.11 E-value=47 Score=26.30 Aligned_cols=37 Identities=14% Similarity=0.214 Sum_probs=26.6
Q ss_pred chHHHHHHHHHHHhhcCCCCEEEEEeCCC-chhhHHHHh
Q psy11241 12 DEITSVNKEADRLVREDKVDIVIALSHAG-VDLDQTVAK 49 (148)
Q Consensus 12 d~~~~~~~~v~~lr~~~g~D~iI~lsH~g-~~~d~~la~ 49 (148)
...+.+.+.++.+|+. +||+||++.-.. ++..+-+|.
T Consensus 90 p~~~~v~~~~~~~~~~-~~D~IIavGGGsviD~AK~iA~ 127 (408)
T 1oj7_A 90 PAYETLMNAVKLVREQ-KVTFLLAVGGGSVLDGTKFIAA 127 (408)
T ss_dssp CBHHHHHHHHHHHHHH-TCCEEEEEESHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEeCCchHHHHHHHHHH
Confidence 4678888899999988 899999997632 333344444
No 98
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=26.08 E-value=69 Score=21.20 Aligned_cols=41 Identities=15% Similarity=0.161 Sum_probs=31.1
Q ss_pred EechHHHHHHHHHHHhhcCCCCEEEEEeCCCchhhHHHHhhC
Q psy11241 10 ILDEITSVNKEADRLVREDKVDIVIALSHAGVDLDQTVAKAS 51 (148)
Q Consensus 10 f~d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d~~la~~~ 51 (148)
+.+..+.++.++.+++.. +.|+||.+.-.|+.--..||+.+
T Consensus 8 ~~~~~~~~~~la~~i~~~-~~d~iv~v~~gg~~~a~~la~~l 48 (153)
T 1vdm_A 8 WWQVDRAIFALAEKLREY-KPDVIIGVARGGLIPAVRLSHIL 48 (153)
T ss_dssp HHHHHHHHHHHHHHHHHH-CCSEEEEETTTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcc-CCCEEEEECCcCHHHHHHHHHHh
Confidence 445556777778788764 69999999888887777788776
No 99
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=25.81 E-value=1.4e+02 Score=19.53 Aligned_cols=45 Identities=20% Similarity=0.203 Sum_probs=26.6
Q ss_pred HHHHHHHHHhhcCCCCEEEEEeCCCchhh------HHHHhh-CCCccEEEeCC
Q psy11241 16 SVNKEADRLVREDKVDIVIALSHAGVDLD------QTVAKA-SKHVSIVVGGH 61 (148)
Q Consensus 16 ~~~~~v~~lr~~~g~D~iI~lsH~g~~~d------~~la~~-~~~iDvIlgGH 61 (148)
...+.++..++. ++|+|.+-+-++.... +.|.++ .+++-+++||-
T Consensus 42 p~e~~v~~a~~~-~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~~~i~v~vGG~ 93 (137)
T 1ccw_A 42 PQELFIKAAIET-KADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGGN 93 (137)
T ss_dssp CHHHHHHHHHHH-TCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEES
T ss_pred CHHHHHHHHHhc-CCCEEEEEecCcCcHHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 344556666665 6888887776664432 123222 23577888885
No 100
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=25.76 E-value=1e+02 Score=21.08 Aligned_cols=30 Identities=23% Similarity=0.360 Sum_probs=12.4
Q ss_pred chHHHHHHHHHHHhhcCCCCEEEEEeCCCc
Q psy11241 12 DEITSVNKEADRLVREDKVDIVIALSHAGV 41 (148)
Q Consensus 12 d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~ 41 (148)
|-.+.+++.+.++.+.+++|+||.-.-.|.
T Consensus 64 Dd~~~i~~al~~~~a~~~~DlVittGG~g~ 93 (178)
T 3iwt_A 64 DDKIKILKAFTDALSIDEVDVIISTGGTGY 93 (178)
T ss_dssp SCHHHHHHHHHHHHTCTTCCEEEEESCCSS
T ss_pred CCHHHHHHHHHHHHhcCCCCEEEecCCccc
Confidence 333444444443332223555554444443
No 101
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=25.73 E-value=1e+02 Score=21.26 Aligned_cols=33 Identities=12% Similarity=0.273 Sum_probs=19.0
Q ss_pred echHHHHHHHHHHHhhcCCCCEEEEEeCCCchh
Q psy11241 11 LDEITSVNKEADRLVREDKVDIVIALSHAGVDL 43 (148)
Q Consensus 11 ~d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~ 43 (148)
.|-.+.+++.+.++.++.++|+||.-.-.|...
T Consensus 51 ~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~~ 83 (172)
T 1mkz_A 51 KENRYAIRAQVSAWIASDDVQVVLITGGTGLTE 83 (172)
T ss_dssp CSCHHHHHHHHHHHHHSSSCCEEEEESCCSSST
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCCC
Confidence 455566666666654432477776666666543
No 102
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=25.60 E-value=41 Score=26.46 Aligned_cols=27 Identities=26% Similarity=0.298 Sum_probs=22.1
Q ss_pred chHHHHHHHHHHHhhcCCCCEEEEEeCC
Q psy11241 12 DEITSVNKEADRLVREDKVDIVIALSHA 39 (148)
Q Consensus 12 d~~~~~~~~v~~lr~~~g~D~iI~lsH~ 39 (148)
...+.+.+.++.+|+. +||+||++.-.
T Consensus 72 p~~~~v~~~~~~~~~~-~~D~IIavGGG 98 (383)
T 3ox4_A 72 PTVTAVLEGLKILKDN-NSDFVISLGGG 98 (383)
T ss_dssp CBHHHHHHHHHHHHHH-TCSEEEEEESH
T ss_pred CCHHHHHHHHHHHHhc-CcCEEEEeCCc
Confidence 4678888888888887 89999988764
No 103
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}
Probab=25.57 E-value=49 Score=22.97 Aligned_cols=34 Identities=12% Similarity=0.256 Sum_probs=21.2
Q ss_pred CCCEEEEEeCCCchhh---HHHHhhCCCccEEEeCCcc
Q psy11241 29 KVDIVIALSHAGVDLD---QTVAKASKHVSIVVGGHSH 63 (148)
Q Consensus 29 g~D~iI~lsH~g~~~d---~~la~~~~~iDvIlgGH~H 63 (148)
|+|-++++.. ....+ ..|++-+.+.|+||.|++.
T Consensus 43 Gad~v~~v~~-~~~~e~~a~~l~~~~~~p~~Vl~g~t~ 79 (166)
T 3fet_A 43 GSKVLYRAKK-GTPFDAVSEGILKIAGNYDYIAIGSTE 79 (166)
T ss_dssp CCSEEEEECT-TCCHHHHHHHHHHHHTTCSEEEEECSH
T ss_pred CCCEEEEeCC-CCChHHHHHHHHHHHcCCCEEEEcCCC
Confidence 6888888873 11111 2344433488999999874
No 104
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=25.57 E-value=55 Score=25.60 Aligned_cols=37 Identities=19% Similarity=0.213 Sum_probs=27.1
Q ss_pred chHHHHHHHHHHHhhcCCCCEEEEEeCCC-chhhHHHHh
Q psy11241 12 DEITSVNKEADRLVREDKVDIVIALSHAG-VDLDQTVAK 49 (148)
Q Consensus 12 d~~~~~~~~v~~lr~~~g~D~iI~lsH~g-~~~d~~la~ 49 (148)
...+.+.+.++.+|+. +||+||++.-.. ++..+-+|.
T Consensus 72 p~~~~v~~~~~~~~~~-~~d~IIavGGGsv~D~aK~iA~ 109 (386)
T 1rrm_A 72 PTITVVKEGLGVFQNS-GADYLIAIGGGSPQDTCKAIGI 109 (386)
T ss_dssp CBHHHHHHHHHHHHHH-TCSEEEEEESHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc-CcCEEEEeCChHHHHHHHHHHH
Confidence 4678999999999988 899999997643 333344443
No 105
>3qkb_A Uncharacterized protein; beta/alpha-propeller, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.73A {Pediococcus pentosaceus}
Probab=25.23 E-value=79 Score=20.80 Aligned_cols=17 Identities=24% Similarity=0.077 Sum_probs=9.8
Q ss_pred HHHHHHhhcCCCCEEEEE
Q psy11241 19 KEADRLVREDKVDIVIAL 36 (148)
Q Consensus 19 ~~v~~lr~~~g~D~iI~l 36 (148)
++.++.++- |+|.||.+
T Consensus 66 rM~e~A~~l-GANAVIgv 82 (111)
T 3qkb_A 66 KLKKKADLL-EGDGIIGL 82 (111)
T ss_dssp HHHHHHHHT-TCSEEEEE
T ss_pred HHHHHHHHc-CCCEEEEE
Confidence 344444444 77877766
No 106
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=25.13 E-value=1.1e+02 Score=26.71 Aligned_cols=44 Identities=30% Similarity=0.370 Sum_probs=26.4
Q ss_pred HHHHHHHHHhhcCCCCEEEEEeCCCchhh--HHHHhh-----CCCccEEEeC
Q psy11241 16 SVNKEADRLVREDKVDIVIALSHAGVDLD--QTVAKA-----SKHVSIVVGG 60 (148)
Q Consensus 16 ~~~~~v~~lr~~~g~D~iI~lsH~g~~~d--~~la~~-----~~~iDvIlgG 60 (148)
...+.++..++. ++|+|.+-+.++.... .++++. ...+=+++||
T Consensus 635 ~~eeiv~aA~e~-~adiVglSsl~~~~~~~~~~vi~~L~~~G~~~i~VivGG 685 (727)
T 1req_A 635 TPEETARQAVEA-DVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILITVGG 685 (727)
T ss_dssp CHHHHHHHHHHT-TCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred CHHHHHHHHHHc-CCCEEEEeeecHhHHHHHHHHHHHHHhcCCCCCEEEEcC
Confidence 345666777766 7998888777653322 223222 2356677787
No 107
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=25.12 E-value=1.1e+02 Score=20.98 Aligned_cols=34 Identities=9% Similarity=0.238 Sum_probs=25.2
Q ss_pred EechHHHHHHHHHHHhhcCCCCEEEEEeCCCchhh
Q psy11241 10 ILDEITSVNKEADRLVREDKVDIVIALSHAGVDLD 44 (148)
Q Consensus 10 f~d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d 44 (148)
..|-.+.+++.+.++.++ ++|+||.-.-.|...+
T Consensus 51 v~Dd~~~I~~~l~~a~~~-~~DlVittGG~g~~~~ 84 (167)
T 2g2c_A 51 VPEGYDTVVEAIATALKQ-GARFIITAGGTGIRAK 84 (167)
T ss_dssp ECSSHHHHHHHHHHHHHT-TCSEEEEESCCSSSTT
T ss_pred eCCCHHHHHHHHHHHHhC-CCCEEEECCCCCCCCC
Confidence 457778888888887764 4999988877776543
No 108
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=25.01 E-value=56 Score=25.88 Aligned_cols=28 Identities=7% Similarity=0.151 Sum_probs=23.1
Q ss_pred chHHHHHHHHHHHhhcCCCCEEEEEeCCC
Q psy11241 12 DEITSVNKEADRLVREDKVDIVIALSHAG 40 (148)
Q Consensus 12 d~~~~~~~~v~~lr~~~g~D~iI~lsH~g 40 (148)
...+.+.+.++.+|+. +||+||++.-..
T Consensus 90 p~~~~v~~~~~~~~~~-~~d~IIavGGGs 117 (387)
T 3uhj_A 90 CCTSEIERVRKVAIEH-GSDILVGVGGGK 117 (387)
T ss_dssp CSHHHHHHHHHHHHHH-TCSEEEEESSHH
T ss_pred CCHHHHHHHHHHHhhc-CCCEEEEeCCcH
Confidence 4568888999999988 899999997643
No 109
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=24.97 E-value=1.2e+02 Score=19.95 Aligned_cols=45 Identities=9% Similarity=0.029 Sum_probs=21.2
Q ss_pred HHHHHHHhhcCCCCEEEE-EeCCCchhhHHHHhhC--CCccEEEeC-Cccc
Q psy11241 18 NKEADRLVREDKVDIVIA-LSHAGVDLDQTVAKAS--KHVSIVVGG-HSHT 64 (148)
Q Consensus 18 ~~~v~~lr~~~g~D~iI~-lsH~g~~~d~~la~~~--~~iDvIlgG-H~H~ 64 (148)
++..+.+++. |+++-+- ....|... ..|.+.. .++|+|+-| |.+.
T Consensus 81 ~~~~~~~~~~-g~~~~~~~~v~~G~~~-~~I~~~a~~~~~DLIV~G~~g~~ 129 (155)
T 3dlo_A 81 SWAVSIIRKE-GAEGEEHLLVRGKEPP-DDIVDFADEVDAIAIVIGIRKRS 129 (155)
T ss_dssp HHHHHHHHHT-TCCEEEEEEESSSCHH-HHHHHHHHHTTCSEEEEECCEEC
T ss_pred HHHHHHHHhc-CCCceEEEEecCCCHH-HHHHHHHHHcCCCEEEECCCCCC
Confidence 3344445555 6665432 22233332 2333332 378998755 4443
No 110
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=24.90 E-value=89 Score=24.06 Aligned_cols=13 Identities=31% Similarity=0.424 Sum_probs=11.1
Q ss_pred CccEEEeCCccce
Q psy11241 53 HVSIVVGGHSHTF 65 (148)
Q Consensus 53 ~iDvIlgGH~H~~ 65 (148)
+.++|+.||+|..
T Consensus 278 ~~~~IV~GHt~~~ 290 (342)
T 2z72_A 278 NVNHIVVGHTSQE 290 (342)
T ss_dssp TCSEEEECSSCCS
T ss_pred CCcEEEECCCccc
Confidence 5799999999964
No 111
>3ief_A TRNA (guanine-N(1)-)-methyltransferase; niaid, ssgcid, seattle structural genomics center for infectious diseases; 2.50A {Bartonella henselae}
Probab=24.50 E-value=29 Score=25.94 Aligned_cols=30 Identities=27% Similarity=0.252 Sum_probs=19.9
Q ss_pred EEEEEeCCCchhhHHHHhhC---CCccEEEeCCc
Q psy11241 32 IVIALSHAGVDLDQTVAKAS---KHVSIVVGGHS 62 (148)
Q Consensus 32 ~iI~lsH~g~~~d~~la~~~---~~iDvIlgGH~ 62 (148)
-||.||=.|-.-++++|+++ +++ ++++||-
T Consensus 82 ~vI~lsP~G~~f~Q~~a~eLa~~~~l-illCGrY 114 (233)
T 3ief_A 82 PRLLMSPRGRLLNQAYARSLARSSGV-TLVCGRF 114 (233)
T ss_dssp CEEEEEEEEEECCHHHHHHHTTSSEE-EEEECCS
T ss_pred CEEEECCCCCccCHHHHHHHHCCCCE-EEEeccc
Confidence 47888888876666666554 334 5668875
No 112
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=24.45 E-value=61 Score=23.39 Aligned_cols=49 Identities=12% Similarity=0.033 Sum_probs=34.4
Q ss_pred CeEEechHHHHHHHHHHHhhcCCCCEEEEEeCC-CchhhHHHHhhCCC-ccEE
Q psy11241 7 NLRILDEITSVNKEADRLVREDKVDIVIALSHA-GVDLDQTVAKASKH-VSIV 57 (148)
Q Consensus 7 ~v~f~d~~~~~~~~v~~lr~~~g~D~iI~lsH~-g~~~d~~la~~~~~-iDvI 57 (148)
...+.+.++.+...++.|++. ++-++++.|+ |-.....+|.+.|+ |.-+
T Consensus 98 ~~~~~~~~~d~~~~~~~l~~~--~~~v~lvG~S~GG~ia~~~a~~~p~~v~~l 148 (281)
T 4fbl_A 98 ASTASDWTADIVAAMRWLEER--CDVLFMTGLSMGGALTVWAAGQFPERFAGI 148 (281)
T ss_dssp TCCHHHHHHHHHHHHHHHHHH--CSEEEEEEETHHHHHHHHHHHHSTTTCSEE
T ss_pred CCCHHHHHHHHHHHHHHHHhC--CCeEEEEEECcchHHHHHHHHhCchhhhhh
Confidence 455667778888899999876 7889999995 44445566666654 5543
No 113
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R*
Probab=24.16 E-value=95 Score=23.91 Aligned_cols=43 Identities=19% Similarity=0.144 Sum_probs=27.1
Q ss_pred HHHHHH-hhcCCCCEEEEEeCCCchh---h---HH---HHhhCCCccEEEeCCcc
Q psy11241 19 KEADRL-VREDKVDIVIALSHAGVDL---D---QT---VAKASKHVSIVVGGHSH 63 (148)
Q Consensus 19 ~~v~~l-r~~~g~D~iI~lsH~g~~~---d---~~---la~~~~~iDvIlgGH~H 63 (148)
+.++++ ... |+|-++++.+-.+.. + .. ++++. +.|+||.|++.
T Consensus 44 ~~~~~a~~a~-GaDkv~~v~d~~l~~~~~~~~a~~La~li~~~-~pdlVL~g~ts 96 (315)
T 1efv_A 44 KVAQDLCKVA-GIAKVLVAQHDVYKGLLPEELTPLILATQKQF-NYTHICAGASA 96 (315)
T ss_dssp HHHHHHHHST-TCCEEEEEECGGGTTCCHHHHHHHHHHHHHHH-CCSEEEEESSH
T ss_pred HHHHHHHHhc-CCCEEEEecCchhccCCHHHHHHHHHHHHHhc-CCCEEEEcCCC
Confidence 344555 555 899999998864431 1 22 22332 57999999976
No 114
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=23.19 E-value=1.4e+02 Score=21.01 Aligned_cols=53 Identities=8% Similarity=0.117 Sum_probs=34.1
Q ss_pred CeEEechHHHHHHHHHHHhhcCCCCEEEEEeCCCchhhHHHHhh-CCCccEEEeCC
Q psy11241 7 NLRILDEITSVNKEADRLVREDKVDIVIALSHAGVDLDQTVAKA-SKHVSIVVGGH 61 (148)
Q Consensus 7 ~v~f~d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d~~la~~-~~~iDvIlgGH 61 (148)
.+-|.-|.+.+.+.+.++..+...++-|.... +++...+|++ -.+.|+|++..
T Consensus 6 ~I~~iapy~~l~~~~~~i~~e~~~~i~i~~~~--l~~~v~~a~~~~~~~dVIISRG 59 (196)
T 2q5c_A 6 KIALISQNENLLNLFPKLALEKNFIPITKTAS--LTRASKIAFGLQDEVDAIISRG 59 (196)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCEEEEEECC--HHHHHHHHHHHTTTCSEEEEEH
T ss_pred cEEEEEccHHHHHHHHHHHhhhCCceEEEECC--HHHHHHHHHHhcCCCeEEEECC
Confidence 56666777777777777776534566655443 5555555555 36799999543
No 115
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=23.14 E-value=72 Score=24.74 Aligned_cols=27 Identities=19% Similarity=0.229 Sum_probs=22.0
Q ss_pred chHHHHHHHHHHHhhcCCCCEEEEEeCC
Q psy11241 12 DEITSVNKEADRLVREDKVDIVIALSHA 39 (148)
Q Consensus 12 d~~~~~~~~v~~lr~~~g~D~iI~lsH~ 39 (148)
.+.+.+.+.++.+++. ++|+||++.-.
T Consensus 70 ~~~~~v~~~~~~~~~~-~~d~IIavGGG 96 (370)
T 1jq5_A 70 ASRNEVERIANIARKA-EAAIVIGVGGG 96 (370)
T ss_dssp CBHHHHHHHHHHHHHT-TCSEEEEEESH
T ss_pred CCHHHHHHHHHHHHhc-CCCEEEEeCCh
Confidence 3457888888889887 89999999764
No 116
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=23.11 E-value=1.7e+02 Score=19.53 Aligned_cols=44 Identities=14% Similarity=0.207 Sum_probs=27.3
Q ss_pred CeEEe-chHHHHHHHHHH----Hhhc--------CCCCEEEEEeCCCchhhHHHHhh
Q psy11241 7 NLRIL-DEITSVNKEADR----LVRE--------DKVDIVIALSHAGVDLDQTVAKA 50 (148)
Q Consensus 7 ~v~f~-d~~~~~~~~v~~----lr~~--------~g~D~iI~lsH~g~~~d~~la~~ 50 (148)
.+.|. |-+++..+..++ .|+- .|-|++|.++......-++||++
T Consensus 86 ~i~f~gddlea~ekalkemirqarkfagtvtytl~gn~l~i~itgvpeqvrkelake 142 (170)
T 4hhu_A 86 VIVFEGDDLEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVITGVPEQVRKELAKE 142 (170)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHHHHTTCEEEEEECSSEEEEEEESCCHHHHHHHHHH
T ss_pred EEEEecCcHHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEEeCCcHHHHHHHHHH
Confidence 46775 666665554444 4431 37899999998776555555543
No 117
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=23.06 E-value=98 Score=22.23 Aligned_cols=30 Identities=7% Similarity=-0.017 Sum_probs=22.8
Q ss_pred chHHHHHHHHHHHhhcCCCCEEEEEeCCCch
Q psy11241 12 DEITSVNKEADRLVREDKVDIVIALSHAGVD 42 (148)
Q Consensus 12 d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~~ 42 (148)
|-..+..++++..++. |.+.|.+--|....
T Consensus 13 DG~~~~ee~v~~A~~~-Gl~~iaiTDH~~~~ 42 (267)
T 2yxo_A 13 HAEGHPEAYLEEARAK-GLKGVVFTDHSPMP 42 (267)
T ss_dssp SCCSCHHHHHHHHHHT-TCSEEEEEEECCCC
T ss_pred CCCCCHHHHHHHHHHc-CCCEEEEcCCCCCC
Confidence 3344556788888888 99999999997543
No 118
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=23.00 E-value=88 Score=19.73 Aligned_cols=27 Identities=11% Similarity=0.123 Sum_probs=14.2
Q ss_pred EeCCCchhh-HHHHhhCCCccEEEeCCcc
Q psy11241 36 LSHAGVDLD-QTVAKASKHVSIVVGGHSH 63 (148)
Q Consensus 36 lsH~g~~~d-~~la~~~~~iDvIlgGH~H 63 (148)
+.+...... .+.|++ .++|+|+-|..+
T Consensus 89 ~~~g~~~~~I~~~a~~-~~~dliV~G~~~ 116 (143)
T 3fdx_A 89 VAEGSPKDKILALAKS-LPADLVIIASHR 116 (143)
T ss_dssp EEESCHHHHHHHHHHH-TTCSEEEEESSC
T ss_pred EEecChHHHHHHHHHH-hCCCEEEEeCCC
Confidence 334445432 234443 378988866544
No 119
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=21.80 E-value=1.5e+02 Score=22.68 Aligned_cols=34 Identities=15% Similarity=0.393 Sum_probs=26.5
Q ss_pred CCCCCCeEEechHHHHHHHHHHHhhcCCCCEEEEE
Q psy11241 2 IASTGNLRILDEITSVNKEADRLVREDKVDIVIAL 36 (148)
Q Consensus 2 ~s~~~~v~f~d~~~~~~~~v~~lr~~~g~D~iI~l 36 (148)
+++.+||.|....+.++..+++|++. |+-+=+.+
T Consensus 129 ~TTegGlDv~~~~~~L~~~i~~L~~~-GIrVSLFI 162 (278)
T 3gk0_A 129 LTTEGGLDVVGHFDAVRAACKQLADA-GVRVSLFI 162 (278)
T ss_dssp BCSSSSBCTTTTHHHHHHHHHHHHHT-TCEEEEEE
T ss_pred cCCCcchhhhccHHHHHHHHHHHHHC-CCEEEEEe
Confidence 45567898888889999999999988 77554444
No 120
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=21.65 E-value=1.4e+02 Score=21.04 Aligned_cols=34 Identities=15% Similarity=0.324 Sum_probs=21.9
Q ss_pred EechHHHHHHHHHHHhhcCCCCEEEEEeCCCchh
Q psy11241 10 ILDEITSVNKEADRLVREDKVDIVIALSHAGVDL 43 (148)
Q Consensus 10 f~d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~ 43 (148)
..|-.+.+++.+.++.+++++|+||.-.-.|...
T Consensus 59 v~Dd~~~I~~al~~a~~~~~~DlVIttGGtg~g~ 92 (189)
T 1jlj_A 59 VPDEIEEIKETLIDWCDEKELNLILTTGGTGFAP 92 (189)
T ss_dssp ECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSST
T ss_pred eCCCHHHHHHHHHHHhhcCCCCEEEEcCCCCCCC
Confidence 3466677777777665422488887777776653
No 121
>2jz7_A Selenium binding protein; NMR {Methanococcus vannielii}
Probab=21.63 E-value=66 Score=19.93 Aligned_cols=23 Identities=13% Similarity=-0.044 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEEe
Q psy11241 14 ITSVNKEADRLVREDKVDIVIALS 37 (148)
Q Consensus 14 ~~~~~~~v~~lr~~~g~D~iI~ls 37 (148)
-++++++.++.++- |+|.||.+-
T Consensus 34 ~~A~~rm~e~A~~l-GAnAVVgvr 56 (81)
T 2jz7_A 34 DEIVENLRKQVKAK-GGMGLIAFR 56 (81)
T ss_dssp HHHHHHHHHHHHHT-TCCEEECCC
T ss_pred HHHHHHHHHHHHHc-CCCEEEEEE
Confidence 45777788888887 899998763
No 122
>4h3z_A TRNA (guanine-N(1)-)-methyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: SAH; 2.15A {Burkholderia phymatum} PDB: 4h3y_A*
Probab=21.55 E-value=86 Score=23.96 Aligned_cols=31 Identities=19% Similarity=0.273 Sum_probs=21.9
Q ss_pred CEEEEEeCCCchhhHHHHhhC---CCccEEEeCCc
Q psy11241 31 DIVIALSHAGVDLDQTVAKAS---KHVSIVVGGHS 62 (148)
Q Consensus 31 D~iI~lsH~g~~~d~~la~~~---~~iDvIlgGH~ 62 (148)
-.||.||=.|-.-++.+|+++ +++ ++++||-
T Consensus 107 ~~vI~lsP~G~~f~Q~~a~~La~~~~l-iliCGrY 140 (276)
T 4h3z_A 107 ARVVMMSPQGATLNHDKVMRFAAEPGL-ILLCGRY 140 (276)
T ss_dssp CEEEEEEEEEEECCHHHHHHHHTSSEE-EEECCCS
T ss_pred ceEEEECCCCCeeehHHHHHhhccCCE-EEEeccc
Confidence 478999998877666666554 444 6778885
No 123
>1vr4_A Hypothetical protein APC22750; structural genomics, pentamer, PSI, PR structure initiative, the midwest center for structural GEN MCSG; 2.09A {Bacillus cereus} SCOP: d.230.5.1 PDB: 2gtc_A
Probab=21.54 E-value=1e+02 Score=19.74 Aligned_cols=21 Identities=0% Similarity=0.215 Sum_probs=13.8
Q ss_pred HHHHHHHHHhhcCCCCEEEEEe
Q psy11241 16 SVNKEADRLVREDKVDIVIALS 37 (148)
Q Consensus 16 ~~~~~v~~lr~~~g~D~iI~ls 37 (148)
+++++.++.++. |+|.||.+.
T Consensus 61 A~~rm~~~A~~l-GAnAVVgvr 81 (103)
T 1vr4_A 61 AMDEMKELAKQK-GANAIVGVD 81 (103)
T ss_dssp HHHHHHHHHHHT-TCSEEEEEE
T ss_pred HHHHHHHHHHHc-CCCEEEEEE
Confidence 444455555556 899999874
No 124
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=21.51 E-value=41 Score=25.79 Aligned_cols=36 Identities=6% Similarity=0.175 Sum_probs=19.6
Q ss_pred HHHHHHhhcCCCCEEEEEeCCCchhhHHHHhhCCCccEEEeC
Q psy11241 19 KEADRLVREDKVDIVIALSHAGVDLDQTVAKASKHVSIVVGG 60 (148)
Q Consensus 19 ~~v~~lr~~~g~D~iI~lsH~g~~~d~~la~~~~~iDvIlgG 60 (148)
.++..|... ||.+.|+-++. +.|.+.+...|+|+++
T Consensus 175 p~A~lL~~~-gAtVtv~h~~t-----~~L~~~~~~ADIVI~A 210 (285)
T 3p2o_A 175 PMATMLLNA-GATVSVCHIKT-----KDLSLYTRQADLIIVA 210 (285)
T ss_dssp HHHHHHHHT-TCEEEEECTTC-----SCHHHHHTTCSEEEEC
T ss_pred HHHHHHHHC-CCeEEEEeCCc-----hhHHHHhhcCCEEEEC
Confidence 344445544 56544443321 2355666778888865
No 125
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=21.35 E-value=81 Score=24.58 Aligned_cols=36 Identities=25% Similarity=0.427 Sum_probs=26.8
Q ss_pred hHHHHHHHHHHHhhcCCCCEEEEEeCCC-chhhHHHHh
Q psy11241 13 EITSVNKEADRLVREDKVDIVIALSHAG-VDLDQTVAK 49 (148)
Q Consensus 13 ~~~~~~~~v~~lr~~~g~D~iI~lsH~g-~~~d~~la~ 49 (148)
..+.+.+.++.+++. ++|+||++.-.. ++..+-+|.
T Consensus 83 ~~~~v~~~~~~~~~~-~~d~IIavGGGsv~D~AK~iA~ 119 (371)
T 1o2d_A 83 SFDNVMKAVERYRND-SFDFVVGLGGGSPMDFAKAVAV 119 (371)
T ss_dssp BHHHHHHHHHHHTTS-CCSEEEEEESHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhc-CCCEEEEeCChHHHHHHHHHHH
Confidence 678999999999987 899999997643 333344444
No 126
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=20.92 E-value=1.5e+02 Score=20.16 Aligned_cols=34 Identities=18% Similarity=0.409 Sum_probs=22.7
Q ss_pred EechHHHHHHHHHHHhhcCCCCEEEEEeCCCchh
Q psy11241 10 ILDEITSVNKEADRLVREDKVDIVIALSHAGVDL 43 (148)
Q Consensus 10 f~d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~ 43 (148)
..|-.+.+++.+.++.+.+++|+||.-.-.|...
T Consensus 52 v~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g~ 85 (167)
T 1uuy_A 52 VPDEVERIKDILQKWSDVDEMDLILTLGGTGFTP 85 (167)
T ss_dssp ECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSST
T ss_pred cCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 3466777777777765412588888877776553
No 127
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=20.83 E-value=2.1e+02 Score=21.29 Aligned_cols=28 Identities=14% Similarity=0.281 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEEeCCCch
Q psy11241 14 ITSVNKEADRLVREDKVDIVIALSHAGVD 42 (148)
Q Consensus 14 ~~~~~~~v~~lr~~~g~D~iI~lsH~g~~ 42 (148)
.+++++.++.+-+. |+|-++++...|..
T Consensus 18 ~~~l~~lv~~li~~-Gv~gl~v~GttGE~ 45 (286)
T 2r91_A 18 PELFANHVKNITSK-GVDVVFVAGTTGLG 45 (286)
T ss_dssp HHHHHHHHHHHHHT-TCCEEEETSTTTTG
T ss_pred HHHHHHHHHHHHHC-CCCEEEECccccCh
Confidence 36788888888887 89999998888754
No 128
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=20.82 E-value=98 Score=19.48 Aligned_cols=48 Identities=10% Similarity=0.048 Sum_probs=24.0
Q ss_pred HHHHHHHHHHhhcCC---CCEEEEEeCCCchhhHHHHhhCCCccEEEeC-Cccc
Q psy11241 15 TSVNKEADRLVREDK---VDIVIALSHAGVDLDQTVAKASKHVSIVVGG-HSHT 64 (148)
Q Consensus 15 ~~~~~~v~~lr~~~g---~D~iI~lsH~g~~~d~~la~~~~~iDvIlgG-H~H~ 64 (148)
+.+++.++++.++.| +...+.-...... =.+.|++ .++|+|+-| |.+.
T Consensus 60 ~~~~~~l~~~~~~~g~~~~~~~~~~g~~~~~-I~~~a~~-~~~dliV~G~~~~~ 111 (137)
T 2z08_A 60 ERAEGVLEEARALTGVPKEDALLLEGVPAEA-ILQAARA-EKADLIVMGTRGLG 111 (137)
T ss_dssp HHHHHHHHHHHHHHCCCGGGEEEEESSHHHH-HHHHHHH-TTCSEEEEESSCTT
T ss_pred HHHHHHHHHHHHHcCCCccEEEEEecCHHHH-HHHHHHH-cCCCEEEECCCCCc
Confidence 344555555443113 4666666777422 1223333 368887755 4343
No 129
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=20.81 E-value=1.7e+02 Score=21.57 Aligned_cols=44 Identities=20% Similarity=0.236 Sum_probs=27.2
Q ss_pred HHHHHHHHHHhhcCCCCEEEEEeCCCchhh-----HHHHhhCCCccEEEe
Q psy11241 15 TSVNKEADRLVREDKVDIVIALSHAGVDLD-----QTVAKASKHVSIVVG 59 (148)
Q Consensus 15 ~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d-----~~la~~~~~iDvIlg 59 (148)
+.+++.+++|++. |.+...+-.-..-+++ .++.+++..||+++-
T Consensus 44 ~~~~~~~~~l~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVN 92 (255)
T 4g81_D 44 TLLAESVDTLTRK-GYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILIN 92 (255)
T ss_dssp HHHHHHHHHHHHT-TCCEEECCCCTTCHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred HHHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEE
Confidence 5667778888877 6666544433333332 234456678999984
No 130
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=20.72 E-value=1.3e+02 Score=23.74 Aligned_cols=52 Identities=12% Similarity=0.183 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEEeCCCchhh-------HHHHhhCCCcc-EEEeCCcccee
Q psy11241 14 ITSVNKEADRLVREDKVDIVIALSHAGVDLD-------QTVAKASKHVS-IVVGGHSHTFL 66 (148)
Q Consensus 14 ~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d-------~~la~~~~~iD-vIlgGH~H~~~ 66 (148)
.+-+.++++.+.+. |||.|.+---.|+..- ..+.+.+|++| +.|+-|.|..+
T Consensus 156 ~~~~~~~~~~~~~~-Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~ 215 (370)
T 3rmj_A 156 IDFLAEICGAVIEA-GATTINIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDL 215 (370)
T ss_dssp HHHHHHHHHHHHHH-TCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCTT
T ss_pred HHHHHHHHHHHHHc-CCCEEEecCccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCCC
Confidence 45667777777777 8998777776776432 24555677765 78899999665
No 131
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=20.70 E-value=1.4e+02 Score=20.35 Aligned_cols=34 Identities=18% Similarity=0.304 Sum_probs=20.9
Q ss_pred EechHHHHHHHHHHHhhcCCCCEEEEEeCCCchh
Q psy11241 10 ILDEITSVNKEADRLVREDKVDIVIALSHAGVDL 43 (148)
Q Consensus 10 f~d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~ 43 (148)
..|-.+.+++.+.++.+.+++|+||.-.-.|...
T Consensus 53 v~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g~ 86 (169)
T 1y5e_A 53 VKDDKESIQQAVLAGYHKEDVDVVLTNGGTGITK 86 (169)
T ss_dssp ECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSST
T ss_pred eCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCCC
Confidence 3456667777666665511477777776666553
No 132
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=20.64 E-value=2e+02 Score=21.06 Aligned_cols=44 Identities=11% Similarity=0.179 Sum_probs=23.9
Q ss_pred HHHHHHHHhhcCCCCEEEEEeCCCchhh--HHHH----hhCCCccEEEeCC
Q psy11241 17 VNKEADRLVREDKVDIVIALSHAGVDLD--QTVA----KASKHVSIVVGGH 61 (148)
Q Consensus 17 ~~~~v~~lr~~~g~D~iI~lsH~g~~~d--~~la----~~~~~iDvIlgGH 61 (148)
..+.+..+++. ++|+|.+-+-++.... +++. +..+.+-+++||-
T Consensus 163 ~e~l~~~~~~~-~~d~V~lS~l~~~~~~~~~~~i~~l~~~~~~~~v~vGG~ 212 (258)
T 2i2x_B 163 AEEVLAAVQKE-KPIMLTGTALMTTTMYAFKEVNDMLLENGIKIPFACGGG 212 (258)
T ss_dssp SHHHHHHHHHH-CCSEEEEECCCTTTTTHHHHHHHHHHTTTCCCCEEEEST
T ss_pred HHHHHHHHHHc-CCCEEEEEeeccCCHHHHHHHHHHHHhcCCCCcEEEECc
Confidence 34455555555 6887776665443221 2232 2335577888884
No 133
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=20.53 E-value=1.1e+02 Score=22.17 Aligned_cols=45 Identities=22% Similarity=0.213 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhhcCCC--CEEEEEeCCCc-hhhHHHHhhCCCccEEEeC
Q psy11241 15 TSVNKEADRLVREDKV--DIVIALSHAGV-DLDQTVAKASKHVSIVVGG 60 (148)
Q Consensus 15 ~~~~~~v~~lr~~~g~--D~iI~lsH~g~-~~d~~la~~~~~iDvIlgG 60 (148)
.++...++.|++. |+ .-|++++=..- +.-+.+.+.+|++.++.+.
T Consensus 143 ~T~~~ai~~L~~~-G~pe~~I~~~~~vaa~egl~~l~~~~P~v~i~ta~ 190 (217)
T 3dmp_A 143 YSAAHAIDVLKRR-GVPGERLMFLALVAAPEGVQVFQDAHPDVKLYVAS 190 (217)
T ss_dssp HHHHHHHHHHHTT-TCCGGGEEEECSEECHHHHHHHHHHCTTCEEEESE
T ss_pred HHHHHHHHHHHHc-CCCcCeEEEEEEEeCHHHHHHHHHHCCCCEEEEEE
Confidence 4778888999988 77 55555554433 3346788889999877653
No 134
>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*
Probab=20.47 E-value=66 Score=21.60 Aligned_cols=46 Identities=26% Similarity=0.284 Sum_probs=32.2
Q ss_pred chHHHHHHHHHHHhhcCCCCEEEEEeCCCchhhHHHHhhC--CCccEE
Q psy11241 12 DEITSVNKEADRLVREDKVDIVIALSHAGVDLDQTVAKAS--KHVSIV 57 (148)
Q Consensus 12 d~~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d~~la~~~--~~iDvI 57 (148)
+..+.+++++.++++..+.|+||.+...|+.--..||..+ |.++.+
T Consensus 11 ~i~~~~~~La~~i~~~~~~~~vvgi~~Gg~~~a~~la~~l~~~~~~~i 58 (152)
T 1nul_A 11 MLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTV 58 (152)
T ss_dssp HHHHHHHHHHHHHCSGGGCSEEEEEETTTHHHHHHHHHHHTCCCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCCcceEE
Confidence 3445667777777763247899999999998777787765 334444
No 135
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=20.40 E-value=1e+02 Score=23.67 Aligned_cols=52 Identities=13% Similarity=0.248 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEEeCCCchhh-------HHHHhhCCCcc-EEEeCCcccee
Q psy11241 14 ITSVNKEADRLVREDKVDIVIALSHAGVDLD-------QTVAKASKHVS-IVVGGHSHTFL 66 (148)
Q Consensus 14 ~~~~~~~v~~lr~~~g~D~iI~lsH~g~~~d-------~~la~~~~~iD-vIlgGH~H~~~ 66 (148)
.+.+.++++++.+. |||.|.+---.|...- ..+.+.+++++ +.|+-|.|..+
T Consensus 150 ~~~~~~~~~~~~~~-G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~ 209 (325)
T 3eeg_A 150 QAFLARMVEAVIEA-GADVVNIPDTTGYMLPWQYGERIKYLMDNVSNIDKAILSAHCHNDL 209 (325)
T ss_dssp HHHHHHHHHHHHHH-TCSEEECCBSSSCCCHHHHHHHHHHHHHHCSCGGGSEEEECBCCTT
T ss_pred HHHHHHHHHHHHhc-CCCEEEecCccCCcCHHHHHHHHHHHHHhCCCCCceEEEEEeCCCC
Confidence 46667777888777 8997666666665432 23455667654 78999999766
No 136
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=20.30 E-value=1.7e+02 Score=18.23 Aligned_cols=43 Identities=9% Similarity=0.237 Sum_probs=20.9
Q ss_pred HHHHHhhcCCCCEEEEEeCCCchhhHHHHhhCCCccEEEeC-Cccce
Q psy11241 20 EADRLVREDKVDIVIALSHAGVDLDQTVAKASKHVSIVVGG-HSHTF 65 (148)
Q Consensus 20 ~v~~lr~~~g~D~iI~lsH~g~~~d~~la~~~~~iDvIlgG-H~H~~ 65 (148)
..+.++.. |..+-..+.+.. . ...|.+...++|+|+-| |.+..
T Consensus 71 ~~~~~~~~-g~~~~~~v~~g~-~-~~~I~~~a~~~dliV~G~~~~~~ 114 (138)
T 3idf_A 71 FSTFFTEK-GINPFVVIKEGE-P-VEMVLEEAKDYNLLIIGSSENSF 114 (138)
T ss_dssp HHHHHHTT-TCCCEEEEEESC-H-HHHHHHHHTTCSEEEEECCTTST
T ss_pred HHHHHHHC-CCCeEEEEecCC-h-HHHHHHHHhcCCEEEEeCCCcch
Confidence 33444444 565444443332 2 23344433499998855 44433
Done!