Query psy11245
Match_columns 87
No_of_seqs 62 out of 64
Neff 4.3
Searched_HMMs 29240
Date Fri Aug 16 21:49:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11245.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11245hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uul_A Utrophin; spectrin repe 99.6 5.6E-15 1.9E-19 94.4 10.3 72 10-81 4-75 (118)
2 3uun_A Dystrophin; triple heli 99.6 1.1E-14 3.8E-19 92.6 10.5 72 9-80 3-74 (119)
3 1u5p_A Spectrin alpha chain, b 99.3 4.6E-11 1.6E-15 82.7 10.9 77 2-80 104-180 (216)
4 3f31_A Spectrin alpha chain, b 99.2 7.2E-11 2.5E-15 80.1 7.9 76 2-80 41-116 (149)
5 1cun_A Protein (alpha spectrin 99.2 1.6E-10 5.4E-15 79.4 9.6 69 11-80 3-71 (213)
6 1quu_A Human skeletal muscle a 99.1 3.6E-10 1.2E-14 80.9 10.0 70 10-79 16-85 (250)
7 1cun_A Protein (alpha spectrin 99.1 6.6E-10 2.3E-14 76.3 10.5 77 2-80 101-177 (213)
8 3fb2_A Spectrin alpha chain, b 99.1 5E-10 1.7E-14 78.5 9.2 70 8-78 13-82 (218)
9 1u4q_A Spectrin alpha chain, b 99.1 1.2E-09 4E-14 79.1 10.5 76 2-79 104-179 (322)
10 1u5p_A Spectrin alpha chain, b 99.1 8.1E-10 2.8E-14 76.4 9.2 73 8-81 3-75 (216)
11 1s35_A Beta-I spectrin, spectr 99.1 1.1E-09 3.7E-14 75.7 9.7 68 12-80 4-71 (214)
12 3edv_A Spectrin beta chain, br 99.1 1.3E-09 4.6E-14 79.2 10.6 75 2-78 214-288 (323)
13 3lbx_A Spectrin alpha chain, e 99.1 6.2E-10 2.1E-14 76.8 8.1 76 2-80 51-126 (161)
14 3edv_A Spectrin beta chain, br 99.0 1.1E-09 3.9E-14 79.5 9.5 76 2-80 108-183 (323)
15 1s35_A Beta-I spectrin, spectr 99.0 2.5E-09 8.5E-14 73.9 10.8 77 2-80 102-179 (214)
16 3edu_A Beta-I spectrin, spectr 99.0 2.5E-09 8.5E-14 75.0 9.8 69 11-80 4-74 (218)
17 1u4q_A Spectrin alpha chain, b 99.0 4E-09 1.4E-13 76.3 10.4 77 2-80 210-287 (322)
18 3edu_A Beta-I spectrin, spectr 99.0 7.4E-10 2.5E-14 77.7 5.4 76 2-80 103-178 (218)
19 3kbt_A Beta-I spectrin, spectr 99.0 7.6E-09 2.6E-13 75.1 10.6 76 2-79 105-181 (326)
20 3kbt_A Beta-I spectrin, spectr 98.9 5.6E-09 1.9E-13 75.8 9.1 72 6-78 2-73 (326)
21 1hci_A Alpha-actinin 2; triple 98.8 2E-08 6.7E-13 76.6 9.4 70 10-79 133-202 (476)
22 3lbx_B Beta-I spectrin, spectr 98.8 1.9E-08 6.6E-13 69.5 6.7 71 7-78 3-73 (185)
23 3fb2_A Spectrin alpha chain, b 98.7 3E-08 1E-12 69.4 6.4 75 2-78 114-188 (218)
24 1hci_A Alpha-actinin 2; triple 98.6 3.2E-07 1.1E-11 69.8 10.9 79 2-81 233-321 (476)
25 2iak_A Bullous pemphigoid anti 98.6 6.9E-08 2.4E-12 68.4 6.4 73 3-76 15-87 (224)
26 1sjj_A Actinin; 3-helix bundle 98.5 7.9E-07 2.7E-11 72.8 10.4 71 9-79 371-441 (863)
27 2iak_A Bullous pemphigoid anti 98.5 2.1E-07 7.3E-12 65.9 5.5 71 9-80 121-192 (224)
28 2spc_A Spectrin; cytoskeleton; 98.5 2E-07 6.9E-12 59.1 4.6 68 9-77 4-71 (107)
29 3lbx_B Beta-I spectrin, spectr 98.4 3E-06 1E-10 58.3 9.0 58 10-68 112-169 (185)
30 3pdy_A Plectin; cytoskeleton, 98.3 2.9E-06 9.9E-11 59.9 8.6 66 14-80 111-177 (210)
31 3pdy_A Plectin; cytoskeleton, 98.2 4.2E-06 1.5E-10 59.0 7.8 62 14-76 11-72 (210)
32 1quu_A Human skeletal muscle a 98.2 1E-05 3.4E-10 57.7 9.3 68 12-80 133-203 (250)
33 3pe0_A Plectin; cytoskeleton, 98.1 1.2E-05 4.3E-10 60.0 8.2 78 1-80 2-80 (283)
34 3r6n_A Desmoplakin; spectrin r 97.7 0.0001 3.4E-09 59.0 6.8 68 12-80 97-165 (450)
35 1sjj_A Actinin; 3-helix bundle 97.6 7.9E-05 2.7E-09 61.0 5.8 58 19-77 496-553 (863)
36 3r6n_A Desmoplakin; spectrin r 96.4 0.024 8.3E-07 45.2 9.8 69 12-80 203-273 (450)
37 2odv_A Plectin 1, HD1; plakin 95.9 0.12 4.1E-06 37.9 10.5 54 5-59 8-61 (235)
38 3pe0_A Plectin; cytoskeleton, 95.3 0.044 1.5E-06 40.7 6.4 71 10-80 116-188 (283)
39 1g8x_A Myosin II heavy chain f 94.6 0.024 8.3E-07 49.2 3.8 69 11-80 889-958 (1010)
40 1wlx_A Alpha-actinin 4; three- 94.0 0.4 1.4E-05 32.9 8.2 49 19-68 23-71 (129)
41 2ycu_A Non muscle myosin 2C, a 87.2 0.5 1.7E-05 40.9 4.0 55 22-77 892-947 (995)
42 1g8x_A Myosin II heavy chain f 80.3 11 0.00039 32.7 9.4 47 13-60 771-817 (1010)
43 2odv_A Plectin 1, HD1; plakin 64.9 4.9 0.00017 29.2 3.0 64 12-79 132-195 (235)
44 3qrx_B Melittin; calcium-bindi 44.4 8.6 0.0003 19.8 1.0 18 12-29 8-25 (26)
45 1pcf_A P15, transcriptional co 36.9 34 0.0012 20.6 3.1 20 6-25 45-64 (66)
46 3a7o_A Autophagy protein 16; c 32.9 85 0.0029 19.7 4.5 32 34-68 2-37 (75)
47 1j27_A Hypothetical protein TT 31.7 34 0.0012 22.0 2.6 18 57-74 18-35 (102)
48 1m2x_A Class B carbapenemase B 24.0 52 0.0018 21.7 2.5 51 10-61 172-222 (223)
49 4agh_A Mosub1, transcription c 23.6 66 0.0022 22.5 3.1 27 6-32 90-116 (158)
50 3k6c_A Uncharacterized protein 21.6 41 0.0014 21.9 1.6 17 18-34 65-81 (95)
51 1r7c_A Genome polyprotein; mem 21.5 50 0.0017 17.6 1.6 12 16-27 4-15 (31)
52 3ff5_A PEX14P, peroxisomal bio 21.3 85 0.0029 18.3 2.8 20 65-84 9-28 (54)
No 1
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=99.62 E-value=5.6e-15 Score=94.35 Aligned_cols=72 Identities=17% Similarity=0.405 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCCC
Q psy11245 10 WNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEASL 81 (87)
Q Consensus 10 w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~pl 81 (87)
..+|+.+|++|+.||..++..|+...|+|+|+++|+.|+..|++|+.||.++++.|.++...|+.|+...+.
T Consensus 4 L~~f~~~l~el~~WL~e~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~v~~~g~~L~~~~~~ 75 (118)
T 3uul_A 4 LDSYQIALEEVLTWLLSAEDTFQEQDDISDDVEDVKEQFATHETFMMELSAHQSSVGSVLQAGNQLMTQGTL 75 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 468999999999999999999999999999999999999999999999999999999999999999965543
No 2
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=99.60 E-value=1.1e-14 Score=92.61 Aligned_cols=72 Identities=18% Similarity=0.386 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245 9 HWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS 80 (87)
Q Consensus 9 ~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p 80 (87)
+..+|+.++++|+.||..++..|+...|+|+|+++|+.|+..|++|+.||.++++.|.++...|+.|+..++
T Consensus 3 ~L~~F~~~l~el~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~~~~~g~~L~~~~~ 74 (119)
T 3uun_A 3 NLDRYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQGRVGNILQLGSKLIGTGK 74 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 467899999999999999999999999999999999999999999999999999999999999999996544
No 3
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=99.28 E-value=4.6e-11 Score=82.73 Aligned_cols=77 Identities=14% Similarity=0.354 Sum_probs=68.7
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245 2 RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS 80 (87)
Q Consensus 2 rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p 80 (87)
+||.+.. ..+|...+++++.||..+++.++ ..|+|+|+++|+.++..|++|+.|+..+++.|.++...|+.++..++
T Consensus 104 ~Le~~~~-l~qf~~~~~~~~~Wl~e~e~~~~-~~~~g~dl~~v~~ll~kh~~~~~el~~~~~~i~~l~~~g~~L~~~~~ 180 (216)
T 1u5p_A 104 KLNESHR-LHQFFRDMDDEESWIKEKKLLVS-SEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNT 180 (216)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT-CCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHH-HHHHHHHHHHHHhHHHHHHHHhc-CcccCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 5776655 56789999999999999998654 68999999999999999999999999999999999999999995544
No 4
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=99.19 E-value=7.2e-11 Score=80.15 Aligned_cols=76 Identities=21% Similarity=0.267 Sum_probs=69.0
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245 2 RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS 80 (87)
Q Consensus 2 rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p 80 (87)
+||.+. .+.+|...+.|+..||..|+.-++. |.+||+..|+.++..|++|+.||.++++.|.++...|+.++..++
T Consensus 41 ~Le~s~-~l~~F~~d~~el~~Wi~ek~~~~~~--~~~~d~~~v~~~l~kH~afe~El~a~~~~l~~v~~~g~~Li~~~~ 116 (149)
T 3f31_A 41 KLEDSY-RFQFFQRDAEELEKWIQEKLQIASD--ENYKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGH 116 (149)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTS--CSSCSSSCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcC--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 688888 5999999999999999999987544 566999999999999999999999999999999999999996655
No 5
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=99.18 E-value=1.6e-10 Score=79.44 Aligned_cols=69 Identities=14% Similarity=0.367 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245 11 NALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS 80 (87)
Q Consensus 11 ~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p 80 (87)
.+|...+.+++.||..+++.|+. .|+|+|+++|++++..|++|+.||..+++.|.+++..|+.++..++
T Consensus 3 ~qf~~~~~~~~~Wl~e~e~~l~~-~~~g~dl~~v~~ll~kh~~~~~ei~~~~~~v~~v~~~g~~L~~~~~ 71 (213)
T 1cun_A 3 HQFFRDMDDEESWIKEKKLLVSS-EDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDTGKKLSDDNT 71 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhHHHHHHHHhcC-cccCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 46888999999999999988775 7999999999999999999999999999999999999999995543
No 6
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.14 E-value=3.6e-10 Score=80.90 Aligned_cols=70 Identities=11% Similarity=0.152 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcC
Q psy11245 10 WNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEA 79 (87)
Q Consensus 10 w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~ 79 (87)
..+|.....++..||..|++.|+...+||+|+.+|+..+..|++|+.+|..+++.|..+...|+.++..+
T Consensus 16 ~~~F~~~~~e~~~Wl~e~e~~l~~~~~~g~dl~~v~~llkkh~~~~~el~~~~~~v~~l~~~~~~L~~~~ 85 (250)
T 1quu_A 16 AEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELD 85 (250)
T ss_dssp HHHHHHHHHHHHHHTTTHHHHHHCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 7899999999999999999999999999999999999999999999999999999999999999999544
No 7
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=99.12 E-value=6.6e-10 Score=76.31 Aligned_cols=77 Identities=18% Similarity=0.373 Sum_probs=68.5
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245 2 RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS 80 (87)
Q Consensus 2 rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p 80 (87)
+||.+.+ ..+|.....++..||..+++.++. .++|+|++.|+.++..|++|++++..+++.|.++...|+.++..++
T Consensus 101 ~Le~~~~-~~~f~~~~~e~~~Wl~~~e~~l~~-~~~g~~~~~v~~ll~~h~~~~~el~~~~~~i~~l~~~~~~L~~~~~ 177 (213)
T 1cun_A 101 RLEESLE-YQQFVANVEEEEAWINEKMTLVAS-EDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNN 177 (213)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5676664 478889999999999999988765 5899999999999999999999999999999999999999995443
No 8
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=99.10 E-value=5e-10 Score=78.51 Aligned_cols=70 Identities=16% Similarity=0.307 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhc
Q psy11245 8 EHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNE 78 (87)
Q Consensus 8 ~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~ 78 (87)
=.+.+|...+++|+.||..+...|+. .++|+|++.|+.++..|+.|+.||+++++.|.++...|+.++..
T Consensus 13 ~~~~~F~~~~~~l~~Wl~~~~~~l~~-~e~~~d~~~ve~ll~~H~~l~~ei~~~~~~~~~~~~~G~~Ll~~ 82 (218)
T 3fb2_A 13 HDLQRFLSDFRDLMSWINGIRGLVSS-DELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAH 82 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTC-CCCCSSSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHcC-CCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 35789999999999999999999986 49999999999999999999999999999999999999999943
No 9
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.07 E-value=1.2e-09 Score=79.05 Aligned_cols=76 Identities=14% Similarity=0.361 Sum_probs=67.6
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcC
Q psy11245 2 RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEA 79 (87)
Q Consensus 2 rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~ 79 (87)
+||.+.. +.+|...+.++..||..+++.++. .|+|+|++.|+.++..|++|+.||..+++.|..++..|+.++..+
T Consensus 104 ~Le~~~~-l~~f~~~~~~~~~Wl~e~e~~~~~-~~~g~dl~~v~~ll~~h~~l~~el~~~~~~i~~l~~~g~~L~~~~ 179 (322)
T 1u4q_A 104 KLNESHR-LHQFFRDMDDEESWIKEKKLLVSS-EDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDN 179 (322)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHhccC-CCcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 5666665 677888999999999999877765 689999999999999999999999999999999999999999543
No 10
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=99.07 E-value=8.1e-10 Score=76.41 Aligned_cols=73 Identities=8% Similarity=0.219 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCCC
Q psy11245 8 EHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEASL 81 (87)
Q Consensus 8 ~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~pl 81 (87)
..+..|...+.++..||..++..|+.. ++|+|+.+|+.++..|+.|..++..+++.|.++...|..|+..++.
T Consensus 3 ~~~~~F~~~~~~l~~Wl~~~e~~l~~~-~~g~dl~~v~~ll~kh~~le~~i~~~~~~v~~l~~~~~~L~~~~~~ 75 (216)
T 1u5p_A 3 NKQQNFNTGIKDFDFWLSEVEALLASE-DYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAF 75 (216)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTCC-CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCc-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 356789999999999999999999875 8999999999999999999999999999999999999999966553
No 11
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.07 E-value=1.1e-09 Score=75.68 Aligned_cols=68 Identities=10% Similarity=0.264 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245 12 ALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS 80 (87)
Q Consensus 12 ~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p 80 (87)
+|...+++++.||..+.+.|+.. .+|||+++|+.++..|++|+.|+..+++.|.++...|+.++..++
T Consensus 4 ~F~~~~~~l~~Wl~~~~~~l~~~-~~~~dl~~v~~ll~~h~~~~~ei~~~~~~~~~~~~~g~~L~~~~~ 71 (214)
T 1s35_A 4 AFLQDLDDFQAWLSITQKAVASE-DMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESGEKVIQGQT 71 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCC-CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHHHHHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcCC
Confidence 57889999999999999999865 579999999999999999999999999999999999999996543
No 12
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=99.07 E-value=1.3e-09 Score=79.19 Aligned_cols=75 Identities=13% Similarity=0.248 Sum_probs=69.2
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhc
Q psy11245 2 RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNE 78 (87)
Q Consensus 2 rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~ 78 (87)
+||.+. .+.+|+..+++++.||..++..|+. .++++|++.++.++..|+.|+.|++.+++.|.++.+.|+.++..
T Consensus 214 ~L~~~~-~~~~F~~~~~~l~~Wl~~~~~~l~~-~~~~~d~~~~e~ll~~h~~l~~ei~~~~~~~~~l~~~g~~Ll~~ 288 (323)
T 3edv_A 214 RLVDTG-DKFRFFSMVRDLMLWMEDVIRQIEA-QEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLAR 288 (323)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHT-CCCCCSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 577766 4788999999999999999999986 68999999999999999999999999999999999999999943
No 13
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=99.06 E-value=6.2e-10 Score=76.82 Aligned_cols=76 Identities=13% Similarity=0.265 Sum_probs=66.9
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245 2 RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS 80 (87)
Q Consensus 2 rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p 80 (87)
+||.+.. -.+|...+.|+..||..|..-++. .++ ||+.+|+.+...|++|+.||.++++.|.++...|+.++..+|
T Consensus 51 ~Le~s~~-lq~F~~d~~el~~Wi~ek~~~a~~-~~~-~d~~~v~~ll~kH~afe~El~a~~~~~~~l~~~g~~Li~~~~ 126 (161)
T 3lbx_A 51 KLEDSYH-LQVFKRDADDLGKWIMEKVNILTD-KSY-EDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMGH 126 (161)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHT-TSC-CSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHhhhccC-CCc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 6888884 458999999999999999876654 333 999999999999999999999999999999999999996555
No 14
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=99.05 E-value=1.1e-09 Score=79.55 Aligned_cols=76 Identities=12% Similarity=0.189 Sum_probs=68.1
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245 2 RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS 80 (87)
Q Consensus 2 rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p 80 (87)
+|+.+. ...+|...+.+++.||..|+..|+ .|+|+|+++|+.++..|++|+++|..+++.|.++...|..++..+|
T Consensus 108 ~L~~a~-~~~~f~~~~~e~~~Wl~~k~~~l~--~~~~~d~~~v~~l~~~h~~~~~~l~~~~~~v~~l~~~a~~L~~~~~ 183 (323)
T 3edv_A 108 ILAASY-ELHKFYHDAKEIFGRIQDKHKKLP--EELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYA 183 (323)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHHHTCC--CCCCSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHhhcc--cccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 355444 677888999999999999999985 7999999999999999999999999999999999999999997665
No 15
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.05 E-value=2.5e-09 Score=73.86 Aligned_cols=77 Identities=9% Similarity=0.127 Sum_probs=68.7
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhh-hcCC
Q psy11245 2 RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYL-NEAS 80 (87)
Q Consensus 2 rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl-~~~p 80 (87)
+|+... .+..|.....++..||..++..|+. .++|+|+++|+.++..|++|+.+|.+++..|.++...|+.++ ..||
T Consensus 102 ~L~~~l-~l~~F~~~~~~~~~Wl~~~E~~l~~-~~~g~~~~~v~~llkkh~~f~~~l~~~~~~i~~l~~~a~~L~~~~h~ 179 (214)
T 1s35_A 102 TLAQCL-GFQEFQKDAKQAEAILSNQEYTLAH-LEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNL 179 (214)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 466554 4888999999999999999988874 689999999999999999999999999999999999999999 4555
No 16
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=99.01 E-value=2.5e-09 Score=74.95 Aligned_cols=69 Identities=19% Similarity=0.268 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhH-hHHHHHHHHHHHHHhhh-cCC
Q psy11245 11 NALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED-KRAIIENSILSGRQYLN-EAS 80 (87)
Q Consensus 11 ~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~-k~~~V~~~L~s~r~fl~-~~p 80 (87)
-+|...+.++..||..|+..|+. .++|+|++.|+.+...|++|++||.+ +++.|.++...|..++. .||
T Consensus 4 ~~f~~~~~~l~~Wl~~ke~~l~~-~~~g~dl~~v~~l~~k~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~ 74 (218)
T 3edu_A 4 FQLKRETDDLEQWISEKELVASS-PEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHS 74 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcc-cccCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCC
Confidence 36788899999999999999985 69999999999999999999999998 89999999999999994 444
No 17
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=98.99 E-value=4e-09 Score=76.27 Aligned_cols=77 Identities=18% Similarity=0.359 Sum_probs=68.6
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhh-cCC
Q psy11245 2 RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLN-EAS 80 (87)
Q Consensus 2 rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~-~~p 80 (87)
+|+.+.. +..|.....++..||..+++.|+ ..|+|+|+++++.++..|++|+++++.+++.|..+...|+.++. .+|
T Consensus 210 ~L~~~~~-~~qf~~~~~~~~~Wl~~~e~~l~-~~~~g~~~~~~~~ll~~h~~~~~el~~~~~~v~~l~~~~~~L~~~~~~ 287 (322)
T 1u4q_A 210 RLEESLE-YQQFVANVEEEEAWINEKMTLVA-SEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNH 287 (322)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT-CCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 5665444 78899999999999999999886 46999999999999999999999999999999999999999994 444
No 18
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=98.96 E-value=7.4e-10 Score=77.67 Aligned_cols=76 Identities=16% Similarity=0.131 Sum_probs=56.1
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245 2 RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS 80 (87)
Q Consensus 2 rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p 80 (87)
+|+.+ ....+|+..+.+++.||..|+..|+ .|+|+|+++|+.++..|++|.++|...++.|.+....|..++..+|
T Consensus 103 ~L~~a-~~~~~F~~~~~e~~~Wl~ek~~~l~--~~~g~dl~~v~~l~~~h~~~e~dL~~~~~~v~~l~~~a~~L~~~~~ 178 (218)
T 3edu_A 103 LLAAS-YDLHRYFYTGAEILGLIDEKHRELP--EDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYA 178 (218)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHHHCCC---------------CCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHhhCC--CccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 45555 4678899999999999999999995 8899999999999999999999999999999999999999986655
No 19
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=98.95 E-value=7.6e-09 Score=75.09 Aligned_cols=76 Identities=20% Similarity=0.289 Sum_probs=67.0
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhH-hHHHHHHHHHHHHHhhhcC
Q psy11245 2 RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED-KRAIIENSILSGRQYLNEA 79 (87)
Q Consensus 2 rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~-k~~~V~~~L~s~r~fl~~~ 79 (87)
+||... .+..|...+.++..||..++..++ ..++|+|++.|+.+...|+.|++++.. +.+.|.++...|..++..+
T Consensus 105 ~Le~~l-~l~~f~~~~~~l~~Wl~~~e~~l~-~~~~g~d~~~v~~l~~~~~~f~~el~~~~~~~v~~l~~~~~~L~~~~ 181 (326)
T 3kbt_A 105 KLENMY-HLFQLKRETDDLEQWISEKELVAS-SPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAG 181 (326)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH-CCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHc-cccCCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcC
Confidence 456554 567788888999999999999887 478999999999999999999999998 8999999999999999443
No 20
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=98.92 E-value=5.6e-09 Score=75.78 Aligned_cols=72 Identities=17% Similarity=0.148 Sum_probs=64.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhc
Q psy11245 6 NSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNE 78 (87)
Q Consensus 6 ~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~ 78 (87)
++..-.+|...+.|+.+||..++..|+. .++|+|+++|+.++..|++|++||..+++.|..+...|+.++..
T Consensus 2 ~~~~~qqf~~~~~el~~Wl~e~~~~l~~-~~~g~d~~~~~~ll~kh~~~~~el~~~~~~v~~l~~~~~~L~~~ 73 (326)
T 3kbt_A 2 NANEAQQYYLDADEAEAWIGEQELYVIS-DEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQLASRAQGLLSA 73 (326)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHTTSC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhcC-CccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 4455678999999999999999999876 68999999999999999999999999999999999999999954
No 21
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=98.83 E-value=2e-08 Score=76.55 Aligned_cols=70 Identities=11% Similarity=0.152 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcC
Q psy11245 10 WNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEA 79 (87)
Q Consensus 10 w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~ 79 (87)
+.+|.....++.+||..+++.|+...+||+|+++|+.++..|++|+++|..+++.|.++...|+.++..+
T Consensus 133 ~~~f~~~~~~~~~Wl~e~e~~l~~~~~~g~dl~~v~~ll~kh~~~~~~l~~~~~~v~~l~~~~~~L~~~~ 202 (476)
T 1hci_A 133 AEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELD 202 (476)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHCCGGGSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCccCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCc
Confidence 5677778889999999999999987777999999999999999999999999999999999999999543
No 22
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=98.75 E-value=1.9e-08 Score=69.47 Aligned_cols=71 Identities=11% Similarity=0.172 Sum_probs=63.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhc
Q psy11245 7 SEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNE 78 (87)
Q Consensus 7 ~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~ 78 (87)
+..+-+|+..+++++.|+..+...|+.. .+++||+.|+.++..|+.|+.||.++++.|..+...|+.++..
T Consensus 3 ~~dl~~F~~~~~dl~~Wl~~~~~~l~~~-e~~~d~~~~e~ll~~H~~~~~ei~~~~~~~~~l~~~G~~L~~~ 73 (185)
T 3lbx_B 3 TADKFRFFSMARDLLSWMESIIRQIETQ-ERPRDVSSVELLMKYHQGINAEIETRSKNFSACLELGESLLQR 73 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHS-CC--CCSSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhc
Confidence 4567899999999999999999999975 5699999999999999999999999999999999999999943
No 23
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=98.70 E-value=3e-08 Score=69.40 Aligned_cols=75 Identities=12% Similarity=0.208 Sum_probs=47.7
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhc
Q psy11245 2 RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNE 78 (87)
Q Consensus 2 rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~ 78 (87)
+|+... .+..|.....++..||..++..|+.. ++|+|++.|+.++..|++|+++|..++..|..+...|..++..
T Consensus 114 ~L~q~l-~l~~F~~d~~~~~~WL~~~e~~L~~~-~~g~s~~~ve~ll~~h~~f~~~l~~~~~~v~~l~~~~~~L~~~ 188 (218)
T 3fb2_A 114 MLDQCL-ELQLFHRDCEQAENWMAAREAFLNTE-DKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFADQLIAA 188 (218)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHHHCC--------------------CHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 344444 35667777889999999999999885 8999999999999999999999999999999999999999943
No 24
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=98.63 E-value=3.2e-07 Score=69.81 Aligned_cols=79 Identities=13% Similarity=0.156 Sum_probs=65.6
Q ss_pred hhhhhhHHHH-------HHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHH---HHH
Q psy11245 2 RLESNSEHWN-------ALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENS---ILS 71 (87)
Q Consensus 2 rLE~~~~~w~-------~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~---L~s 71 (87)
+|+.+...+. .|.....++.+||..+++.|.... +|+|++.|+.+...|++|+++|.++++.|.++ ...
T Consensus 233 ~L~~~~~~~~~~e~l~~~f~~~a~~~~~Wl~~~~~~l~~~~-~~~dl~~v~~ll~~h~~~~~~l~~~~~~~~~~~~l~~~ 311 (476)
T 1hci_A 233 ALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMF-IVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNE 311 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC-CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555544 566677889999999999999876 79999999999999999999999999998877 688
Q ss_pred HHHhhhcCCC
Q psy11245 72 GRQYLNEASL 81 (87)
Q Consensus 72 ~r~fl~~~pl 81 (87)
|+.++.....
T Consensus 312 ~~~l~~~~~~ 321 (476)
T 1hci_A 312 VEKVIQSYNI 321 (476)
T ss_dssp HHHHHHTTTC
T ss_pred HHHHHHhcCC
Confidence 8999965443
No 25
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=98.62 E-value=6.9e-08 Score=68.44 Aligned_cols=73 Identities=19% Similarity=0.349 Sum_probs=60.8
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhh
Q psy11245 3 LESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYL 76 (87)
Q Consensus 3 LE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl 76 (87)
|+....+-.+++..++++.+||..+++.|+.. +.|+|+++|+.++..|++|.+++..+++.|..+...+..|.
T Consensus 15 l~~~L~ea~~~~~~~~~l~~Wl~e~e~~l~s~-d~g~Dl~~v~~ll~kh~~~e~ei~~~~~~v~~~~~~~~~~~ 87 (224)
T 2iak_A 15 LDQNLTEEEVNMKFVQDLLNWVDEMQVQLDRT-EWGSDLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQMT 87 (224)
T ss_dssp SSSCCCHHHHHC-CHHHHHHHHHHHHHHHHTC-CCCSSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHGGGCC
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 44444445566677999999999999999874 68999999999999999999999999999998877766664
No 26
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=98.50 E-value=7.9e-07 Score=72.80 Aligned_cols=71 Identities=13% Similarity=0.113 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcC
Q psy11245 9 HWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEA 79 (87)
Q Consensus 9 ~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~ 79 (87)
...+|.....++..||..+++.|+...+..+|+.+|+.++..|++|+.+|..+++.|..+...|+.++..+
T Consensus 371 l~~~F~~~~~~~~~Wl~~~e~~l~~~~~g~~dl~~v~~ll~kh~~f~~el~~~~~~v~~l~~~~~~L~~~~ 441 (863)
T 1sjj_A 371 LAEKFRQKASIHESWTDGKEAMLQQKDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELD 441 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCTTTSSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 45677778899999999999999996666669999999999999999999999999999999999999543
No 27
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=98.47 E-value=2.1e-07 Score=65.88 Aligned_cols=71 Identities=14% Similarity=0.149 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhh-hcCC
Q psy11245 9 HWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYL-NEAS 80 (87)
Q Consensus 9 ~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl-~~~p 80 (87)
.-.+|.....+++.||..|++.++ ...+|.|+..|+.....|.+|+.||..+++.|.++...|+.++ ..||
T Consensus 121 ~l~~F~~~~~~~~~Wi~eke~~~~-s~d~g~~l~~v~~L~~kh~~l~~el~~~~~~v~~v~~~g~~L~~~~h~ 192 (224)
T 2iak_A 121 TLHNFVTRATNELIWLNEKEESEV-AYDWSERNSSVARKKSYHAELMRELEQKEESIKAVQEIAEQLLLENHP 192 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC-CC---------------CSSHHHHHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-ccccCCCchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCC
Confidence 445666777889999999999876 4788999999999999999999999999999999999999999 4554
No 28
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1
Probab=98.45 E-value=2e-07 Score=59.09 Aligned_cols=68 Identities=10% Similarity=0.139 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhh
Q psy11245 9 HWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLN 77 (87)
Q Consensus 9 ~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~ 77 (87)
.+-.|.....++..||..++.-|+ ...+|+|+..|+..+..|++|..++.+....|..+...|+.++.
T Consensus 4 ~lq~F~~d~~~~e~Wl~~~e~~l~-~~d~g~~l~~v~~Llkkh~~fe~~~~~~~~~i~~l~~~a~~L~~ 71 (107)
T 2spc_A 4 DLQLYMRDCELAESWMSAREAFLN-ADDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTVADQLIA 71 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-CcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567888899999999999998777 45779999999999999999999999999999999999999994
No 29
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=98.35 E-value=3e-06 Score=58.34 Aligned_cols=58 Identities=14% Similarity=0.250 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHH
Q psy11245 10 WNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENS 68 (87)
Q Consensus 10 w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~ 68 (87)
.-.|.....++..||..++..|+. .|+|+|++.|+.++..|++|..+|.+.+..|...
T Consensus 112 l~~F~~d~~~~~~Wl~~~e~~L~~-~~~g~sl~~ve~LlkkH~~fe~~l~~~~e~i~~L 169 (185)
T 3lbx_B 112 VCQFSRDASVAEAWLIAQEPYLAS-GDFGHTVDSVEKLIKRHEAFEKSTASWAERFAAL 169 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC-CCCCSSHHHHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHhHhhhcc-CCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 445667778899999999999976 6999999999999999999999999999988764
No 30
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=98.33 E-value=2.9e-06 Score=59.87 Aligned_cols=66 Identities=17% Similarity=0.169 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhh-hcCC
Q psy11245 14 LLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYL-NEAS 80 (87)
Q Consensus 14 ~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl-~~~p 80 (87)
.....+++.||..|+..+.. .-+|.|+..|+.....|.+|++||..+++.|.++...|..+| ..||
T Consensus 111 ~~~~~~~~~Wl~eke~~~~s-~d~g~~~~~v~~l~~k~~~f~~el~~~~~~v~~l~~~~~~Ll~~~h~ 177 (210)
T 3pdy_A 111 VAAATKELMWLNEKEEEEVG-FDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHP 177 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-SCCSTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHHHHHHHc-cccCCCchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 44445778999999999986 678888888999999999999999999999999999999999 5665
No 31
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=98.24 E-value=4.2e-06 Score=59.02 Aligned_cols=62 Identities=26% Similarity=0.365 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhh
Q psy11245 14 LLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYL 76 (87)
Q Consensus 14 ~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl 76 (87)
...++++..||..|...|+. .+.|-|+++|+.++..|++|..+|...++.|.+.-..|..|.
T Consensus 11 ~r~~~dl~~Wl~e~~~~l~s-~d~G~Dl~~ve~llkkH~~le~ei~~~~~~v~~l~~~a~~l~ 72 (210)
T 3pdy_A 11 LRYLQDLLAWVEENQHRVDG-AEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARSDEGQLS 72 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSC
T ss_pred hhhHHHHHHHHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 56789999999999888876 688999999999999999999999999999999888887764
No 32
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=98.21 E-value=1e-05 Score=57.70 Aligned_cols=68 Identities=13% Similarity=0.155 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhH---HHHHHHHHHHHHhhhcCC
Q psy11245 12 ALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKR---AIIENSILSGRQYLNEAS 80 (87)
Q Consensus 12 ~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~---~~V~~~L~s~r~fl~~~p 80 (87)
.|.....++..||..+++.|.... +|+|++.|+.+...|++|+++|.+.+ +.|......+..++...+
T Consensus 133 qF~~~a~~~~~Wl~~~e~~l~~~~-~~~d~e~v~~ll~~h~~~~~~l~~~~~~~~~i~~l~~~~~~l~~~~~ 203 (250)
T 1quu_A 133 EFAKRAAPFNNWMEGAMEDLQDMF-IVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYN 203 (250)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTCCC-CCCSTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHhHHHHHHHHHHHHHhcccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 455556688999999999998875 89999999999999999996666665 555555677788875443
No 33
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=98.10 E-value=1.2e-05 Score=60.03 Aligned_cols=78 Identities=15% Similarity=0.147 Sum_probs=58.3
Q ss_pred ChhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhh-cC
Q psy11245 1 NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLN-EA 79 (87)
Q Consensus 1 ~rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~-~~ 79 (87)
+||+....-+ +|.-...+.+.||.-|++... ....|+....|+.....|++|++||.+|++.|..+.+.|+.++. .|
T Consensus 2 ~rL~~l~~L~-qF~~d~~~e~~Wi~Eke~~~~-~~D~~~~~~~l~~~~~kh~~le~El~a~e~~v~~v~~~g~~L~~~~h 79 (283)
T 3pe0_A 2 SHMRSLESLH-SFVAAATKELMWLNEKEEEEV-GFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDH 79 (283)
T ss_dssp -----CHHHH-HHHHHHHHHHHHHHHHHHHHH-TCCCSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred hhHHHHHHHH-HHHHHHHHHHHHHHHHhHHhh-cCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 4677777777 677778999999999999843 23333332238888889999999999999999999999999994 55
Q ss_pred C
Q psy11245 80 S 80 (87)
Q Consensus 80 p 80 (87)
|
T Consensus 80 p 80 (283)
T 3pe0_A 80 P 80 (283)
T ss_dssp T
T ss_pred C
Confidence 5
No 34
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=97.66 E-value=0.0001 Score=58.95 Aligned_cols=68 Identities=12% Similarity=0.076 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhh-hcCC
Q psy11245 12 ALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYL-NEAS 80 (87)
Q Consensus 12 ~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl-~~~p 80 (87)
+|.....+.+.||..|++.+.. .-.|-++..|+.....|++|+.||.+|++.|..+.+.|+.++ ..||
T Consensus 97 qFl~d~~ee~~Wi~EKe~~~~s-~d~gd~l~dv~~l~~khq~l~~EL~~~e~~i~~v~~~G~~Li~~~Hp 165 (450)
T 3r6n_A 97 NIIQATSREIMWINDCEEEELL-YDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQHP 165 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHS-CCCSTTCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-cccCcChhhHHHHHHHHHHHHHHHHHchHHHHHHHHHHHHHHHcCCC
Confidence 5666777889999999987764 344433333333457899999999999999999999999999 5666
No 35
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=97.61 E-value=7.9e-05 Score=61.00 Aligned_cols=58 Identities=16% Similarity=0.174 Sum_probs=52.4
Q ss_pred HHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhh
Q psy11245 19 ELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLN 77 (87)
Q Consensus 19 ELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~ 77 (87)
++..|+..+++.|+.. ++|+|++.|+.++..|+.|+.+|.++++-|.++...++++..
T Consensus 496 ~~~~Wl~~~e~~l~~~-~~g~dl~~ve~ll~kh~~~~~~l~~~~~~~~~~~~l~~~l~~ 553 (863)
T 1sjj_A 496 PFNNWMEGAMEDLQDT-FIVHTIEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSK 553 (863)
T ss_dssp TTHHHHHHHHHHHHCC-CCCSSSGGGHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcch-HhhccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 4889999999999874 689999999999999999999999999999988888887764
No 36
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=96.43 E-value=0.024 Score=45.18 Aligned_cols=69 Identities=6% Similarity=0.080 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHhhhHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245 12 ALLLNLRELSDWVFRKDAELSRL--GPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS 80 (87)
Q Consensus 12 ~L~~sLqELl~Wl~~kd~eL~~q--~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p 80 (87)
+|..-..|.-.||..+++.|... .-.|.|+.+|+..+..|.+|.++|..-+..|.+.-..|+.++..+|
T Consensus 203 QF~~Da~EaesWL~eke~~l~s~y~~D~g~d~~~~e~LLkkh~~le~~l~~~~~~I~~L~~qA~~l~~l~~ 273 (450)
T 3r6n_A 203 QFFEEAQSTEAYLKGLQDSIRKKYPCDKNMPLQHLLEQIKELEKEREKILEYKRQVQNLVNKSKKIVQLKP 273 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCGG
T ss_pred hHHHHHHHHHHHHHHHHHHhcccccCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 34445678999999999999876 2469999999999999999999999999999999999999985444
No 37
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=95.87 E-value=0.12 Score=37.94 Aligned_cols=54 Identities=9% Similarity=0.103 Sum_probs=46.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy11245 5 SNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLE 59 (87)
Q Consensus 5 ~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~ 59 (87)
.+-.-|+.|-.--.+|+.|+..+-..|.... .+|+++.|+++....+.|++..+
T Consensus 8 e~e~~~~eYe~~as~Ll~WI~~~~~~l~~r~-f~~sl~~vq~~l~~f~~fr~~ek 61 (235)
T 2odv_A 8 ELQLRWQEYRELVLLLLQWMRHHTAAFEERR-FPSSFEEIEILWSQFLKFKEMEL 61 (235)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCSSHHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHhccC
Confidence 3445688999999999999999999998775 69999999999999999998665
No 38
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=95.30 E-value=0.044 Score=40.68 Aligned_cols=71 Identities=10% Similarity=0.123 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHHhhhHHH--hhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245 10 WNALLLNLRELSDWVFRKDAEL--SRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS 80 (87)
Q Consensus 10 w~~L~~sLqELl~Wl~~kd~eL--~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p 80 (87)
--+|..-..|+..||....+.+ ..-...|.|+.+++..+..|.+|.++|...+..|...-..|+.+..-+|
T Consensus 116 ~~qF~~da~e~e~Wl~~~~e~~~~~~s~d~g~d~~s~~~LLkkh~~le~~l~~~~~~i~~L~~~a~~l~~l~~ 188 (283)
T 3pe0_A 116 YFQFFSDVREAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAKAVVQLKP 188 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence 3456677778889887333322 2345679999999999999999999999999999999999999985333
No 39
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=94.62 E-value=0.024 Score=49.21 Aligned_cols=69 Identities=16% Similarity=0.163 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHH-HHHHHHHHhhhcCC
Q psy11245 11 NALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIE-NSILSGRQYLNEAS 80 (87)
Q Consensus 11 ~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~-~~L~s~r~fl~~~p 80 (87)
.++..--.+.-+|+..|+.-|+.. ..|-|+.+|+..+..|.+|..+|..++.-|. ..-..|..++....
T Consensus 889 qkF~rka~~~e~Wl~ek~~~l~s~-d~g~dL~~Vqal~KKhea~e~dl~a~e~ri~~~l~~~a~eL~~~~y 958 (1010)
T 1g8x_A 889 QKYNRILKKLENWATTKSVYLGSN-ETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILAQLTELNY 958 (1010)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHSSC-CSCCSTTTTGGGTTSHHHHTTTTTHHHHTHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhccc-cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 445555566788999999999875 4788999999999999999999999999998 67777888775443
No 40
>1wlx_A Alpha-actinin 4; three-helix bundle, protein binding; NMR {Homo sapiens}
Probab=93.96 E-value=0.4 Score=32.89 Aligned_cols=49 Identities=18% Similarity=0.195 Sum_probs=42.2
Q ss_pred HHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHH
Q psy11245 19 ELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENS 68 (87)
Q Consensus 19 ELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~ 68 (87)
-+-.|+.-+++.|+ .+=+...+..|+..+..|.+|+..|.+.+.-+...
T Consensus 23 ~fNnW~e~A~EdL~-D~~~v~sleEI~~L~~~He~F~~~L~~a~~e~~~i 71 (129)
T 1wlx_A 23 PFNNWMESAMEDLQ-DMFIVHTIEEIEGLISAHDQFKSTLPDADREREAI 71 (129)
T ss_dssp HHHHHHHHHHHHHH-SCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHhc-cchhhccHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 45789999999999 66666999999999999999999997777666655
No 41
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=87.25 E-value=0.5 Score=40.93 Aligned_cols=55 Identities=16% Similarity=0.210 Sum_probs=47.2
Q ss_pred HHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHH-HHHHHHHHhhh
Q psy11245 22 DWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIE-NSILSGRQYLN 77 (87)
Q Consensus 22 ~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~-~~L~s~r~fl~ 77 (87)
+|+..|++-|+..-+ |-|+..|+.....|.+|..+|..++..|. .....|+.+.+
T Consensus 892 ~Wl~eke~~l~s~d~-g~dl~~vqallkKhea~e~dl~a~e~ri~~~l~~~a~~L~~ 947 (995)
T 2ycu_A 892 NWATTKSVYLGSNET-GDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILAQLTE 947 (995)
T ss_dssp CHHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHTTTCSCSSHHHHHHHHTT
T ss_pred HHHHHHHHHhccccc-ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 377788888887654 88999999999999999999999999987 77788888774
No 42
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=80.34 E-value=11 Score=32.71 Aligned_cols=47 Identities=23% Similarity=0.437 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhH
Q psy11245 13 LLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED 60 (87)
Q Consensus 13 L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~ 60 (87)
+..--.+++.|+..+...+... ..+.++..||.....|+.|+++.+.
T Consensus 771 Y~~~a~~L~~WIr~kqa~l~~r-~~~~sl~~IQ~ll~~f~~fk~~~kp 817 (1010)
T 1g8x_A 771 YLKRANELVQWINDKQASLESR-DFGDSIESVQSFMNAHKEYKKTEKP 817 (1010)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC-CCCSSHHHHHHHHHHHHHHHHTSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhh-hccccHHHHHHHHHHHHHHHhccCC
Confidence 3344457899999999877654 5799999999999999999998763
No 43
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=64.86 E-value=4.9 Score=29.25 Aligned_cols=64 Identities=13% Similarity=0.037 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcC
Q psy11245 12 ALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEA 79 (87)
Q Consensus 12 ~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~ 79 (87)
+|+.---..-+||..++..|+... .++. +-++...|.+|-+.|...+..|...-..|..+-+.+
T Consensus 132 kf~rka~~~e~~L~~~~~~L~~d~---~~l~-~~~a~k~~e~ie~dL~~~e~~i~~l~~~a~~L~~~~ 195 (235)
T 2odv_A 132 KLQMEAGLAEEQLNQADALLQSDV---RLLA-AGKVPQRAGEVERDLDKADSMIRLLFNDVQTLKDGR 195 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH---HHTT-TTCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh---hhcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 333344455689999988885331 3333 334466699999999999999998888888776443
No 44
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=44.39 E-value=8.6 Score=19.79 Aligned_cols=18 Identities=33% Similarity=0.540 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHhhhH
Q psy11245 12 ALLLNLRELSDWVFRKDA 29 (87)
Q Consensus 12 ~L~~sLqELl~Wl~~kd~ 29 (87)
-|...|-.|++|+.+|..
T Consensus 8 VLa~~LP~liSWiK~kr~ 25 (26)
T 3qrx_B 8 VLTTGLPALISWIKRKRQ 25 (26)
T ss_pred HHHccchHHHHHHHHHhc
Confidence 355678889999998864
No 45
>1pcf_A P15, transcriptional coactivator PC4; transcriptional cofactor, ssDNA binding, nuclear protein; 1.74A {Homo sapiens} SCOP: d.18.1.1 PDB: 2c62_A 2phe_A
Probab=36.95 E-value=34 Score=20.63 Aligned_cols=20 Identities=30% Similarity=0.561 Sum_probs=17.7
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q psy11245 6 NSEHWNALLLNLRELSDWVF 25 (87)
Q Consensus 6 ~~~~w~~L~~sLqELl~Wl~ 25 (87)
+.++|+.|..++.++-++|.
T Consensus 45 ~~~qw~~l~~~~~~I~~ai~ 64 (66)
T 1pcf_A 45 NPEQWSQLKEQISDIDDAVR 64 (66)
T ss_dssp CHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999998875
No 46
>3a7o_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.50A {Saccharomyces cerevisiae}
Probab=32.90 E-value=85 Score=19.68 Aligned_cols=32 Identities=25% Similarity=0.394 Sum_probs=19.6
Q ss_pred cCCCCC----CHHHHHHHHHHHHHHHHHhhHhHHHHHHH
Q psy11245 34 LGPIGG----DINVLQKQEDDHRAFRRQLEDKRAIIENS 68 (87)
Q Consensus 34 q~PigG----Dv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~ 68 (87)
++.||| |=+++-+ .-+++|.||++|+.-|...
T Consensus 2 ~~~~g~n~~~~~~~~~~---~l~~Lr~eL~~Ke~eI~~L 37 (75)
T 3a7o_A 2 SGAIGGNIVSHDDALLN---TLAILQKELKSKEQEIRRL 37 (75)
T ss_dssp ----------CHHHHHH---HHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCcCchHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 356777 6666655 6678999999998877654
No 47
>1j27_A Hypothetical protein TT1725; structural genomics, hypothetical protein from thermus therm HB8, MAD; 1.70A {Thermus thermophilus} SCOP: d.58.50.1
Probab=31.69 E-value=34 Score=22.01 Aligned_cols=18 Identities=28% Similarity=0.455 Sum_probs=15.5
Q ss_pred HhhHhHHHHHHHHHHHHH
Q psy11245 57 QLEDKRAIIENSILSGRQ 74 (87)
Q Consensus 57 EL~~k~~~V~~~L~s~r~ 74 (87)
-||+|+.+|.+.++..|.
T Consensus 18 SLKeKR~vvksl~~rlr~ 35 (102)
T 1j27_A 18 SLKEKRALIKPALERLKA 35 (102)
T ss_dssp SHHHHHHHHHHHHHHHHH
T ss_pred ChHHhHHHHHHHHHHHhh
Confidence 489999999999998754
No 48
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=24.03 E-value=52 Score=21.74 Aligned_cols=51 Identities=8% Similarity=0.031 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHh
Q psy11245 10 WNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDK 61 (87)
Q Consensus 10 w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k 61 (87)
...+..+|+.+.+++...+-=+..-.|+. +...|.+..+.-+.|+.++++|
T Consensus 172 ~~~~~~sl~~l~~~~~~~~~i~pgHg~~~-~~~~l~~~~~~l~~~~~~~~~~ 222 (223)
T 1m2x_A 172 VNDWTQSVHNIQQKFSGAQYVVAGHDDWK-DQRSIQHTLDLINEYQQKQKAS 222 (223)
T ss_dssp HHHHHHHHHHHHHHTTTCSEEEESBSCCC-STTHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeCCCCcC-CHHHHHHHHHHHHHHHHHHhcc
Confidence 45667788887776532111223445555 4677888888888888887765
No 49
>4agh_A Mosub1, transcription cofactor; ssDNA binding protein; 1.79A {Magnaporthe oryzae}
Probab=23.56 E-value=66 Score=22.50 Aligned_cols=27 Identities=7% Similarity=0.278 Sum_probs=23.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhHHHh
Q psy11245 6 NSEHWNALLLNLRELSDWVFRKDAELS 32 (87)
Q Consensus 6 ~~~~w~~L~~sLqELl~Wl~~kd~eL~ 32 (87)
+.++|+.|...+.+|-+||..+...+.
T Consensus 90 s~~qw~~L~~~~~~I~~ai~~~g~~~~ 116 (158)
T 4agh_A 90 TVDQYTAFLKAIPAINAELRSRGHDIT 116 (158)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 468999999999999999998875554
No 50
>3k6c_A Uncharacterized protein NE0167; structural genomics, MCSG, unknown function protein, PSI, PR structure initiative; 2.20A {Nitrosomonas europaea}
Probab=21.65 E-value=41 Score=21.88 Aligned_cols=17 Identities=24% Similarity=0.499 Sum_probs=13.8
Q ss_pred HHHHHHHHhhhHHHhhc
Q psy11245 18 RELSDWVFRKDAELSRL 34 (87)
Q Consensus 18 qELl~Wl~~kd~eL~~q 34 (87)
-++++||.+.|++..++
T Consensus 65 g~~lelLrr~Dp~~~~~ 81 (95)
T 3k6c_A 65 AMLLEWIRRCDPAFDKE 81 (95)
T ss_dssp HHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHhCHHHHHH
Confidence 47899999999987643
No 51
>1r7c_A Genome polyprotein; membrane anchor domain, HCV NS5A protein, structure, peptide, membrane protein; NMR {Synthetic} SCOP: j.35.1.1 PDB: 1r7d_A 1r7e_A 1r7f_A 1r7g_A
Probab=21.52 E-value=50 Score=17.56 Aligned_cols=12 Identities=33% Similarity=0.756 Sum_probs=8.3
Q ss_pred HHHHHHHHHHhh
Q psy11245 16 NLRELSDWVFRK 27 (87)
Q Consensus 16 sLqELl~Wl~~k 27 (87)
-|+++++|++..
T Consensus 4 wL~~iwdWvctv 15 (31)
T 1r7c_A 4 WLRDIWDWICEV 15 (31)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 367778887754
No 52
>3ff5_A PEX14P, peroxisomal biogenesis factor 14; protein import, peroxin, 3 helices bundle, protein transport; HET: DPW; 1.80A {Rattus norvegicus}
Probab=21.30 E-value=85 Score=18.31 Aligned_cols=20 Identities=15% Similarity=0.243 Sum_probs=14.6
Q ss_pred HHHHHHHHHHhhhcCCCCCC
Q psy11245 65 IENSILSGRQYLNEASLTDL 84 (87)
Q Consensus 65 V~~~L~s~r~fl~~~pl~~~ 84 (87)
=+..+.+|+.||.++.+...
T Consensus 9 Re~li~~Av~FL~dp~V~~s 28 (54)
T 3ff5_A 9 REPLIATAVKFLQNSRVRQS 28 (54)
T ss_dssp HHHHHHHHHHHHHCTTGGGS
T ss_pred HHHHHHHHHHHhCChhhhcC
Confidence 34567889999988776543
Done!