Query psy11246
Match_columns 101
No_of_seqs 63 out of 65
Neff 4.4
Searched_HMMs 29240
Date Fri Aug 16 21:51:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11246.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11246hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uul_A Utrophin; spectrin repe 99.2 8.5E-11 2.9E-15 76.9 7.3 67 3-69 45-112 (118)
2 3uun_A Dystrophin; triple heli 99.1 1.4E-10 4.9E-15 75.5 7.1 70 3-72 45-115 (119)
3 1u5p_A Spectrin alpha chain, b 99.1 2E-10 6.8E-15 81.9 6.8 84 3-89 45-128 (216)
4 1s35_A Beta-I spectrin, spectr 99.1 3.7E-10 1.3E-14 80.4 7.7 86 3-90 42-127 (214)
5 1cun_A Protein (alpha spectrin 99.0 4.7E-10 1.6E-14 79.4 7.2 84 3-89 42-125 (213)
6 3edv_A Spectrin beta chain, br 99.0 1.1E-09 3.6E-14 82.2 7.1 86 3-90 154-239 (323)
7 3edu_A Beta-I spectrin, spectr 99.0 1.4E-09 4.8E-14 78.5 7.4 85 3-90 43-128 (218)
8 1u4q_A Spectrin alpha chain, b 98.9 4E-09 1.4E-13 78.6 7.1 85 3-90 151-235 (322)
9 3edv_A Spectrin beta chain, br 98.9 5.2E-09 1.8E-13 78.4 7.4 85 3-90 48-133 (323)
10 1u4q_A Spectrin alpha chain, b 98.8 6.2E-09 2.1E-13 77.6 6.9 84 3-89 45-128 (322)
11 3kbt_A Beta-I spectrin, spectr 98.8 1.3E-08 4.4E-13 76.2 7.3 85 3-90 46-130 (326)
12 3lbx_B Beta-I spectrin, spectr 98.8 1.7E-08 5.9E-13 71.7 7.3 84 3-89 46-129 (185)
13 3fb2_A Spectrin alpha chain, b 98.8 1.7E-08 5.8E-13 72.8 7.2 84 3-89 55-138 (218)
14 3kbt_A Beta-I spectrin, spectr 98.7 5.3E-08 1.8E-12 72.8 7.2 85 3-90 152-237 (326)
15 3lbx_A Spectrin alpha chain, e 98.6 5.7E-08 1.9E-12 68.8 6.7 64 3-68 97-160 (161)
16 1quu_A Human skeletal muscle a 98.6 8.2E-08 2.8E-12 70.6 7.5 86 3-90 57-149 (250)
17 1hci_A Alpha-actinin 2; triple 98.6 6.7E-08 2.3E-12 75.9 7.4 86 3-90 174-266 (476)
18 3f31_A Spectrin alpha chain, b 98.5 1.9E-07 6.5E-12 65.0 6.1 62 3-66 87-148 (149)
19 1u5p_A Spectrin alpha chain, b 98.5 1.5E-07 5.2E-12 66.9 5.2 64 3-68 151-214 (216)
20 3lbx_A Spectrin alpha chain, e 98.5 4.3E-08 1.5E-12 69.4 2.3 68 16-90 9-76 (161)
21 3edu_A Beta-I spectrin, spectr 98.4 2.1E-07 7.1E-12 67.1 4.8 68 2-70 148-215 (218)
22 1cun_A Protein (alpha spectrin 98.4 6.8E-07 2.3E-11 63.0 6.7 65 3-69 148-212 (213)
23 3pe0_A Plectin; cytoskeleton, 98.3 1.4E-06 4.9E-11 67.1 7.3 82 3-87 50-131 (283)
24 3f31_A Spectrin alpha chain, b 98.3 2.1E-07 7.1E-12 64.7 1.9 65 19-90 2-66 (149)
25 2spc_A Spectrin; cytoskeleton; 98.3 9.3E-07 3.2E-11 57.6 4.9 62 3-66 45-106 (107)
26 3pdy_A Plectin; cytoskeleton, 98.3 2E-06 7E-11 62.4 7.0 79 3-90 47-125 (210)
27 1sjj_A Actinin; 3-helix bundle 98.3 2E-06 6.9E-11 72.6 7.8 86 3-90 413-505 (863)
28 2iak_A Bullous pemphigoid anti 98.2 1.1E-06 3.6E-11 64.2 4.1 61 4-66 163-223 (224)
29 3r6n_A Desmoplakin; spectrin r 98.2 3.2E-06 1.1E-10 69.5 7.4 84 3-89 135-218 (450)
30 1s35_A Beta-I spectrin, spectr 98.1 5.6E-06 1.9E-10 58.6 6.2 64 3-68 149-212 (214)
31 2iak_A Bullous pemphigoid anti 97.9 1E-05 3.5E-10 58.9 5.1 79 3-90 62-140 (224)
32 3pdy_A Plectin; cytoskeleton, 97.8 3.8E-05 1.3E-09 55.7 6.0 63 3-67 147-209 (210)
33 1hci_A Alpha-actinin 2; triple 97.7 1.7E-05 5.7E-10 62.3 3.6 87 4-90 289-387 (476)
34 3fb2_A Spectrin alpha chain, b 97.5 0.00012 4E-09 52.5 4.3 58 3-62 161-218 (218)
35 1sjj_A Actinin; 3-helix bundle 97.4 4.3E-05 1.5E-09 64.5 1.2 87 4-90 528-626 (863)
36 1quu_A Human skeletal muscle a 96.4 0.0019 6.5E-08 47.2 3.1 66 5-70 173-243 (250)
37 1g8x_A Myosin II heavy chain f 93.0 0.056 1.9E-06 48.3 3.2 67 4-72 929-997 (1010)
38 2ycu_A Non muscle myosin 2C, a 92.8 0.02 6.8E-07 51.0 0.0 67 4-72 921-989 (995)
39 3r6n_A Desmoplakin; spectrin r 92.0 0.22 7.4E-06 40.8 5.2 43 43-89 70-112 (450)
40 2odv_A Plectin 1, HD1; plakin 91.6 0.38 1.3E-05 36.2 5.8 58 4-63 168-225 (235)
41 2yy0_A C-MYC-binding protein; 87.6 1.3 4.3E-05 26.6 4.8 36 32-67 16-51 (53)
42 3e7k_A TRPM7 channel; coiled-c 63.9 14 0.00047 22.7 4.5 45 41-85 8-52 (56)
43 1l8d_A DNA double-strand break 60.5 23 0.00078 22.7 5.4 75 5-80 28-102 (112)
44 1c1g_A Tropomyosin; contractIl 56.4 17 0.00057 24.6 4.4 35 42-76 13-47 (284)
45 4fi5_A Nucleoprotein; structur 49.7 31 0.0011 23.8 4.8 24 1-27 22-45 (113)
46 1g8x_A Myosin II heavy chain f 44.2 23 0.00078 31.7 4.3 47 43-89 852-905 (1010)
47 1ez3_A Syntaxin-1A; three heli 41.7 67 0.0023 20.5 6.6 63 4-72 15-77 (127)
48 4g59_C M152 protein, retinoic 41.4 27 0.00094 27.9 4.0 41 21-62 139-179 (321)
49 2dnx_A Syntaxin-12; snare, HAB 40.9 78 0.0027 21.2 5.8 66 2-67 11-76 (130)
50 3azd_A Short alpha-tropomyosin 40.4 28 0.00095 19.2 2.8 30 52-81 7-36 (37)
51 4ani_A Protein GRPE; chaperone 38.8 69 0.0024 23.8 5.7 39 37-75 68-106 (213)
52 2zvf_A Alanyl-tRNA synthetase; 36.4 62 0.0021 21.8 4.8 42 25-68 17-58 (171)
53 2yfv_C SCM3, KLLA0F05115P; cel 35.2 32 0.0011 21.5 2.8 34 26-60 13-47 (63)
54 2k48_A Nucleoprotein; viral pr 35.0 67 0.0023 21.9 4.6 23 2-27 36-58 (107)
55 2ycu_A Non muscle myosin 2C, a 32.7 48 0.0016 29.5 4.5 48 42-89 843-897 (995)
56 2a3d_A Protein (de novo three- 31.3 37 0.0013 21.3 2.6 18 50-67 3-20 (73)
57 3na7_A HP0958; flagellar bioge 30.3 1.6E+02 0.0053 21.5 6.4 51 31-81 86-136 (256)
58 1fxk_C Protein (prefoldin); ar 29.0 1.2E+02 0.0042 19.7 5.4 43 34-76 87-129 (133)
59 2ic6_A Nucleocapsid protein; h 28.2 1.1E+02 0.0038 19.6 4.6 23 2-27 6-28 (78)
60 1hs7_A Syntaxin VAM3; UP-and-D 27.8 81 0.0028 20.8 4.0 35 25-59 23-58 (97)
61 1rtm_1 Mannose-binding protein 26.8 80 0.0027 20.3 3.9 24 40-63 2-25 (149)
62 2ic9_A Nucleocapsid protein; h 26.7 1.2E+02 0.004 20.3 4.7 23 2-27 6-28 (96)
63 3rrk_A V-type ATPase 116 kDa s 26.5 75 0.0026 23.9 4.2 43 44-86 94-139 (357)
64 1fxk_A Prefoldin; archaeal pro 25.7 1.2E+02 0.0042 18.7 6.0 70 3-73 24-103 (107)
65 3q0x_A Centriole protein; cent 25.0 1.4E+02 0.0047 22.5 5.3 32 41-72 177-208 (228)
66 1fzc_B Fibrin; blood coagulati 24.7 1.1E+02 0.0036 24.0 4.8 27 39-65 34-60 (328)
67 2zdi_C Prefoldin subunit alpha 24.4 1.7E+02 0.0056 19.7 5.7 46 34-79 97-142 (151)
68 1joc_A EEA1, early endosomal a 24.0 1.6E+02 0.0056 19.5 5.7 41 35-75 4-44 (125)
69 3oja_A Leucine-rich immune mol 23.3 2.6E+02 0.0089 21.6 7.1 79 3-81 369-467 (487)
70 2odv_A Plectin 1, HD1; plakin 22.3 1.2E+02 0.004 22.4 4.4 46 44-89 95-147 (235)
71 3k9a_A HIV glycoprotein GP41; 22.3 1.9E+02 0.0064 19.6 5.3 52 49-100 48-100 (108)
72 1dkg_A Nucleotide exchange fac 21.7 2.1E+02 0.0071 20.6 5.6 39 37-75 44-86 (197)
73 3s84_A Apolipoprotein A-IV; fo 21.5 2.2E+02 0.0074 21.4 5.9 41 21-66 186-226 (273)
74 2zqm_A Prefoldin beta subunit 20.9 1.6E+02 0.0056 18.4 6.4 73 3-76 29-111 (117)
75 1lq7_A Alpha3W; three helix bu 20.7 68 0.0023 19.8 2.4 20 43-62 26-45 (67)
No 1
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=99.17 E-value=8.5e-11 Score=76.93 Aligned_cols=67 Identities=19% Similarity=0.345 Sum_probs=61.0
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhcccC-CchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhh
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSLT-SQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFY 69 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~-s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~ 69 (101)
.+.++++|.+|++.|.+++.+|+.++.... +++++..++.+++.||.||+.|+.++.+++.+|+.+-
T Consensus 45 h~~l~~ei~~~~~~v~~v~~~g~~L~~~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~R~~~L~~aL 112 (118)
T 3uul_A 45 HETFMMELSAHQSSVGSVLQAGNQLMTQGTLSDEEEFEIQEQMTLLNARWEALRVESMERQSRLHDAL 112 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999997642 5778999999999999999999999999999998763
No 2
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=99.13 E-value=1.4e-10 Score=75.54 Aligned_cols=70 Identities=17% Similarity=0.312 Sum_probs=62.4
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhccc-CCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhH
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSL-TSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLS 72 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L-~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~ 72 (101)
.+.++.+|.+|++.+.+++.+|+.|+..- .+++++..++.+++.||.||..|+..+.+++.+|+.+-..+
T Consensus 45 h~~l~~ei~~~~~~v~~~~~~g~~L~~~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~R~~~Le~aL~~~ 115 (119)
T 3uun_A 45 HEGYMMDLTAHQGRVGNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWECLRVASMEKQSNLHRVLMDL 115 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999998754 25778999999999999999999999999999998775443
No 3
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=99.09 E-value=2e-10 Score=81.92 Aligned_cols=84 Identities=19% Similarity=0.201 Sum_probs=77.9
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhhhccCchh
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTLQPGIQYP 82 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L~~~L~El 82 (101)
.+.++.+|.+|++.+.+++..|..++.. ++.|+..++.+++.+|.||..|+..+..+|.+|+.+.. +..|..+++++
T Consensus 45 h~~le~~i~~~~~~v~~l~~~~~~L~~~--~~~~~~~i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~-l~qf~~~~~~~ 121 (216)
T 1u5p_A 45 HQLLEADISAHEDRLKDLNSQADSLMTS--SAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHR-LHQFFRDMDDE 121 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTC--SSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 4689999999999999999999999876 57789999999999999999999999999999998876 68899999999
Q ss_pred hhhhhhh
Q psy11246 83 IDTLAFT 89 (101)
Q Consensus 83 i~WL~~~ 89 (101)
..||...
T Consensus 122 ~~Wl~e~ 128 (216)
T 1u5p_A 122 ESWIKEK 128 (216)
T ss_dssp HHHHHHH
T ss_pred HhHHHHH
Confidence 9999886
No 4
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.07 E-value=3.7e-10 Score=80.42 Aligned_cols=86 Identities=16% Similarity=0.295 Sum_probs=78.3
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhhhccCchh
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTLQPGIQYP 82 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L~~~L~El 82 (101)
.++++++|.+|++.|.++..+|+.|+..- +.++++.++.+|+.|+.+|+.|+..+..++.+|+..-+ +..|..+..++
T Consensus 42 h~~~~~ei~~~~~~~~~~~~~g~~L~~~~-~~~~~~~i~~~l~~L~~~w~~L~~~~~~r~~~L~~~l~-l~~F~~~~~~~ 119 (214)
T 1s35_A 42 HAGIKDEIDGHQDSYQRVKESGEKVIQGQ-TDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLG-FQEFQKDAKQA 119 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 46899999999999999999999999874 45688999999999999999999999999999997765 89999999999
Q ss_pred hhhhhhhh
Q psy11246 83 IDTLAFTT 90 (101)
Q Consensus 83 i~WL~~~~ 90 (101)
..||...-
T Consensus 120 ~~Wl~~~E 127 (214)
T 1s35_A 120 EAILSNQE 127 (214)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998653
No 5
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=99.04 E-value=4.7e-10 Score=79.40 Aligned_cols=84 Identities=19% Similarity=0.221 Sum_probs=77.5
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhhhccCchh
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTLQPGIQYP 82 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L~~~L~El 82 (101)
.+.++.+|.+|++.+.++..+|+.++.. +..++..++.+++.+|.+|..|+..+..++.+|+...+ ...|..+++++
T Consensus 42 h~~~~~ei~~~~~~v~~v~~~g~~L~~~--~~~~~~~i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~-~~~f~~~~~e~ 118 (213)
T 1cun_A 42 HKRLEAELAAHEPAIQSVLDTGKKLSDD--NTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLE-YQQFVANVEEE 118 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 4578999999999999999999999886 56788999999999999999999999999999999886 48999999999
Q ss_pred hhhhhhh
Q psy11246 83 IDTLAFT 89 (101)
Q Consensus 83 i~WL~~~ 89 (101)
..||.+.
T Consensus 119 ~~Wl~~~ 125 (213)
T 1cun_A 119 EAWINEK 125 (213)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999985
No 6
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=98.98 E-value=1.1e-09 Score=82.20 Aligned_cols=86 Identities=14% Similarity=0.155 Sum_probs=78.5
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhhhccCchh
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTLQPGIQYP 82 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L~~~L~El 82 (101)
.+.++.+|.+|++.+.+++..|..|+... +++++..++.+++.||.+|..|+..+.++|.+|+.... +..|...++++
T Consensus 154 h~~~~~~l~~~~~~v~~l~~~a~~L~~~~-~~~~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~~~~-~~~F~~~~~~l 231 (323)
T 3edv_A 154 HTTFEHDIQALGTQVRQLQEDAARLQAAY-AGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGD-KFRFFSMVRDL 231 (323)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHHHC-CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 35788999999999999999999999876 56788999999999999999999999999999999875 68999999999
Q ss_pred hhhhhhhh
Q psy11246 83 IDTLAFTT 90 (101)
Q Consensus 83 i~WL~~~~ 90 (101)
..||..+.
T Consensus 232 ~~Wl~~~~ 239 (323)
T 3edv_A 232 MLWMEDVI 239 (323)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999864
No 7
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=98.97 E-value=1.4e-09 Score=78.53 Aligned_cols=85 Identities=13% Similarity=0.070 Sum_probs=77.2
Q ss_pred hHHHHHHHhh-hhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhhhccCch
Q psy11246 3 KKDLQAEIES-HKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTLQPGIQY 81 (101)
Q Consensus 3 ~~eLqaeI~s-h~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L~~~L~E 81 (101)
+++++.++.+ |++-+.++|..|..++.. ++++++.++.+++.||.||..++..+..++.+|+.+. .+.+|..++.+
T Consensus 43 ~~~f~~el~~~~~~~v~~v~~~~~~L~~~--~~~~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~-~~~~F~~~~~e 119 (218)
T 3edu_A 43 FRDFARETGAIGQERVDNVNAFIERLIDA--GHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASY-DLHRYFYTGAE 119 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 4578899998 899999999999999985 5678899999999999999999999999999999885 78899999999
Q ss_pred hhhhhhhhh
Q psy11246 82 PIDTLAFTT 90 (101)
Q Consensus 82 li~WL~~~~ 90 (101)
+..||.++.
T Consensus 120 ~~~Wl~ek~ 128 (218)
T 3edu_A 120 ILGLIDEKH 128 (218)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998754
No 8
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=98.88 E-value=4e-09 Score=78.62 Aligned_cols=85 Identities=18% Similarity=0.209 Sum_probs=77.1
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhhhccCchh
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTLQPGIQYP 82 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L~~~L~El 82 (101)
.+.++++|.+|.+.+..+...|+.|+.. +..++..++.+++.|+.+|..|+..+..++.||+..-. +..|..+..++
T Consensus 151 h~~l~~el~~~~~~i~~l~~~g~~L~~~--~~~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~~~~-~~qf~~~~~~~ 227 (322)
T 1u4q_A 151 HKRLEAELAAHEPAIQGVLDTGKKLSDD--NTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLE-YQQFVANVEEE 227 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 4578999999999999999999999875 46688999999999999999999999999999998655 78999999999
Q ss_pred hhhhhhhh
Q psy11246 83 IDTLAFTT 90 (101)
Q Consensus 83 i~WL~~~~ 90 (101)
..||.+.-
T Consensus 228 ~~Wl~~~e 235 (322)
T 1u4q_A 228 EAWINEKM 235 (322)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998863
No 9
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=98.87 E-value=5.2e-09 Score=78.43 Aligned_cols=85 Identities=12% Similarity=0.128 Sum_probs=77.0
Q ss_pred hHHHHHHHhh-hhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhhhccCch
Q psy11246 3 KKDLQAEIES-HKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTLQPGIQY 81 (101)
Q Consensus 3 ~~eLqaeI~s-h~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L~~~L~E 81 (101)
+.+++.++.+ |++.+.++|..|..++.. ++++++.++.+++.+|.||..|+..+..++.+|+.+. .+..|..++.+
T Consensus 48 ~~~f~~el~~~~~~~v~~v~~~~~~L~~~--~~~~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~-~~~~f~~~~~e 124 (323)
T 3edv_A 48 FREFARDTGNIGQERVDTVNHLADELINS--GHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASY-ELHKFYHDAKE 124 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHc--CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 4578889998 889999999999999886 5778999999999999999999999999999999877 67889999999
Q ss_pred hhhhhhhhh
Q psy11246 82 PIDTLAFTT 90 (101)
Q Consensus 82 li~WL~~~~ 90 (101)
+..||+...
T Consensus 125 ~~~Wl~~k~ 133 (323)
T 3edv_A 125 IFGRIQDKH 133 (323)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999753
No 10
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=98.84 E-value=6.2e-09 Score=77.59 Aligned_cols=84 Identities=19% Similarity=0.201 Sum_probs=77.2
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhhhccCchh
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTLQPGIQYP 82 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L~~~L~El 82 (101)
.+.++.+|.+|++.+..++..|..++.. ++.|+..++.++..++.||..|+..+.++|.+|+.... +..|..++.++
T Consensus 45 h~~le~~i~~~~~~v~~l~~~a~~l~~~--~~~~~~~i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~-l~~f~~~~~~~ 121 (322)
T 1u4q_A 45 HQLLEADISAHEDRLKDLNSQADSLMTS--SAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHR-LHQFFRDMDDE 121 (322)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHTTC--CSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 4578999999999999999999999873 67889999999999999999999999999999998887 78899999999
Q ss_pred hhhhhhh
Q psy11246 83 IDTLAFT 89 (101)
Q Consensus 83 i~WL~~~ 89 (101)
..||...
T Consensus 122 ~~Wl~e~ 128 (322)
T 1u4q_A 122 ESWIKEK 128 (322)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999875
No 11
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=98.79 E-value=1.3e-08 Score=76.21 Aligned_cols=85 Identities=12% Similarity=0.101 Sum_probs=77.1
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhhhccCchh
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTLQPGIQYP 82 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L~~~L~El 82 (101)
.+.++.+|.+|++.+..++..|+.++.. +.+|+..++.+++.++.+|..|+..+.++|.+|+... .+..|...+.++
T Consensus 46 h~~~~~el~~~~~~v~~l~~~~~~L~~~--~~~~~~~i~~~l~~l~~~w~~L~~~~~~R~~~Le~~l-~l~~f~~~~~~l 122 (326)
T 3kbt_A 46 HLRQQRAVEDYGRNIKQLASRAQGLLSA--GHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMY-HLFQLKRETDDL 122 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcC--CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 4578999999999999999999999875 4568999999999999999999999999999999887 668999999999
Q ss_pred hhhhhhhh
Q psy11246 83 IDTLAFTT 90 (101)
Q Consensus 83 i~WL~~~~ 90 (101)
..||..+.
T Consensus 123 ~~Wl~~~e 130 (326)
T 3kbt_A 123 EQWISEKE 130 (326)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998753
No 12
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=98.78 E-value=1.7e-08 Score=71.75 Aligned_cols=84 Identities=14% Similarity=0.176 Sum_probs=76.2
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhhhccCchh
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTLQPGIQYP 82 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L~~~L~El 82 (101)
.++++.+|.+|++.|..+...|+.++..- .++++.++.+|+.|+.+|.++++....++.+|+..-+ +..|..++.++
T Consensus 46 H~~~~~ei~~~~~~~~~l~~~G~~L~~~~--~~~~~~i~~~l~~L~~~w~~L~~~w~~r~~~L~~~l~-l~~F~~d~~~~ 122 (185)
T 3lbx_B 46 HQGINAEIETRSKNFSACLELGESLLQRQ--HQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLE-VCQFSRDASVA 122 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhHHHH
Confidence 36899999999999999999999999874 5678899999999999999999999999999997764 56899999999
Q ss_pred hhhhhhh
Q psy11246 83 IDTLAFT 89 (101)
Q Consensus 83 i~WL~~~ 89 (101)
..||...
T Consensus 123 ~~Wl~~~ 129 (185)
T 3lbx_B 123 EAWLIAQ 129 (185)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999875
No 13
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=98.77 E-value=1.7e-08 Score=72.81 Aligned_cols=84 Identities=14% Similarity=0.196 Sum_probs=76.2
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhhhccCchh
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTLQPGIQYP 82 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L~~~L~El 82 (101)
.++++++|.+|++.|.++...|+.++..- .++++.++.+|+.|+.+|.+|++....++.+|+..-+ +..|..++.++
T Consensus 55 H~~l~~ei~~~~~~~~~~~~~G~~Ll~~~--~~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~q~l~-l~~F~~d~~~~ 131 (218)
T 3fb2_A 55 HQEHRTEIDARAGTFQAFEQFGQQLLAHG--HYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLE-LQLFHRDCEQA 131 (218)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHHHHTT--CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 46899999999999999999999999874 4567889999999999999999999999999998774 58999999999
Q ss_pred hhhhhhh
Q psy11246 83 IDTLAFT 89 (101)
Q Consensus 83 i~WL~~~ 89 (101)
..||...
T Consensus 132 ~~WL~~~ 138 (218)
T 3fb2_A 132 ENWMAAR 138 (218)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999875
No 14
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=98.66 E-value=5.3e-08 Score=72.81 Aligned_cols=85 Identities=13% Similarity=0.051 Sum_probs=75.9
Q ss_pred hHHHHHHHhh-hhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhhhccCch
Q psy11246 3 KKDLQAEIES-HKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTLQPGIQY 81 (101)
Q Consensus 3 ~~eLqaeI~s-h~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L~~~L~E 81 (101)
.++++.++.+ |.+.+..++..|..++..- +++++.++.+++.+|.||..|+..+..++.+|+.+. .+..|...+++
T Consensus 152 ~~~f~~el~~~~~~~v~~l~~~~~~L~~~~--~~~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~a~-~~~~f~~~~~e 228 (326)
T 3kbt_A 152 FRDFARETGAIGQERVDNVNAFIERLIDAG--HSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASY-DLHRYFYTGAE 228 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 4578889988 7889999999999999874 557889999999999999999999999999999886 57789999999
Q ss_pred hhhhhhhhh
Q psy11246 82 PIDTLAFTT 90 (101)
Q Consensus 82 li~WL~~~~ 90 (101)
+..||.+..
T Consensus 229 ~~~Wl~ek~ 237 (326)
T 3kbt_A 229 ILGLIDEKH 237 (326)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998754
No 15
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=98.65 E-value=5.7e-08 Score=68.81 Aligned_cols=64 Identities=17% Similarity=0.265 Sum_probs=59.5
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhh
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIF 68 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~ 68 (101)
.+.++++|.+|++.+..++..|+.++.. ++.++..++.|+++|+.+|..|+.++.+++.||+.+
T Consensus 97 H~afe~El~a~~~~~~~l~~~g~~Li~~--~~~~~~~I~~rl~eL~~~W~~L~~~~~~R~~~L~eA 160 (161)
T 3lbx_A 97 HQSLEAEVQTKSRLMSELEKTREERFTM--GHSAHEETKAHIEELRHLWDLLLELTLEKGDQLLRA 160 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCT--TCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3589999999999999999999999986 678999999999999999999999999999999764
No 16
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=98.64 E-value=8.2e-08 Score=70.64 Aligned_cols=86 Identities=13% Similarity=0.140 Sum_probs=77.8
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHh-------hh
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSV-------TL 75 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~-------~L 75 (101)
.+.++++|.+|++.+..+...|+.++.. +..++..+..|++.++.+|..|+..+..+|.+|+..-.... .|
T Consensus 57 h~~~~~el~~~~~~v~~l~~~~~~L~~~--~~~~~~~I~~r~~~l~~~W~~L~~~~~~R~~~L~~~l~~~~~~d~l~~qF 134 (250)
T 1quu_A 57 HEAFESDLAAHQDRVEQIAAIAQELNEL--DYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEF 134 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578999999999999999999999887 56778889999999999999999999999999998887775 89
Q ss_pred hccCchhhhhhhhhh
Q psy11246 76 QPGIQYPIDTLAFTT 90 (101)
Q Consensus 76 ~~~L~Eli~WL~~~~ 90 (101)
....+++..||+++.
T Consensus 135 ~~~a~~~~~Wl~~~e 149 (250)
T 1quu_A 135 AKRAAPFNNWMEGAM 149 (250)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHH
Confidence 999999999997764
No 17
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=98.63 E-value=6.7e-08 Score=75.92 Aligned_cols=86 Identities=13% Similarity=0.140 Sum_probs=76.6
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHh-------hh
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSV-------TL 75 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~-------~L 75 (101)
.+.++.+|.+|++.+.++...|+.++.. +..++..++.|++.|+.+|..|+..+.++|.+|+....... .|
T Consensus 174 h~~~~~~l~~~~~~v~~l~~~~~~L~~~--~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~~~~~~~~~e~l~~~f 251 (476)
T 1hci_A 174 HEAFESDLAAHQDRVEQIAAIAQELNEL--DYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEF 251 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhC--cCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578999999999999999999999876 56788899999999999999999999999999999877665 78
Q ss_pred hccCchhhhhhhhhh
Q psy11246 76 QPGIQYPIDTLAFTT 90 (101)
Q Consensus 76 ~~~L~Eli~WL~~~~ 90 (101)
.....++..||+.+.
T Consensus 252 ~~~a~~~~~Wl~~~~ 266 (476)
T 1hci_A 252 AKRAAPFNNWMEGAM 266 (476)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 889999999997653
No 18
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=98.51 E-value=1.9e-07 Score=64.95 Aligned_cols=62 Identities=16% Similarity=0.375 Sum_probs=57.7
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhH
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSL 66 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe 66 (101)
.+.++++|.+|++.+..++..|+.++.. ++.++..++.|++.|+.+|..|+.++.+++.+|.
T Consensus 87 H~afe~El~a~~~~l~~v~~~g~~Li~~--~~~~~~~I~~rl~~l~~~W~~L~~~~~~r~~~L~ 148 (149)
T 3f31_A 87 HQAFEAEVQANSGAIVKLDETGNLMISE--GHFASETIRTRLMELHRQWELLLEKMREKGIKLL 148 (149)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHH--TCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3589999999999999999999999987 5789999999999999999999999999999984
No 19
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=98.49 E-value=1.5e-07 Score=66.86 Aligned_cols=64 Identities=23% Similarity=0.323 Sum_probs=57.6
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhh
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIF 68 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~ 68 (101)
.+.++++|.+|++.+.++...|+.|+.. ++.++..++.+++.++.+|..|+..+..++.||+.+
T Consensus 151 h~~~~~el~~~~~~i~~l~~~g~~L~~~--~~~~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a 214 (216)
T 1u5p_A 151 HKRLEAELAAHEPAIQGVLDTGKKLSDD--NTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEES 214 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT--CSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999875 567888999999999999999999999999999865
No 20
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=98.49 E-value=4.3e-08 Score=69.45 Aligned_cols=68 Identities=16% Similarity=0.105 Sum_probs=50.4
Q ss_pred hhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhhhccCchhhhhhhhhh
Q psy11246 16 VYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTLQPGIQYPIDTLAFTT 90 (101)
Q Consensus 16 v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L~~~L~Eli~WL~~~~ 90 (101)
--...+++|.+|+. ++..++.|++.++.||+.++.++.++|.+|+++. .+..|..+++|+..||....
T Consensus 9 ~~~~~~~~~~k~~e------~a~~I~~r~~~l~~rw~~L~~~a~~R~~~Le~s~-~lq~F~~d~~el~~Wi~ek~ 76 (161)
T 3lbx_A 9 KETVVESSGPKVLE------TAEEIQERRQEVLTRYQSFKERVAERGQKLEDSY-HLQVFKRDADDLGKWIMEKV 76 (161)
T ss_dssp -------------C------CSTTGGGHHHHGGGHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred chhccCCCCcchhh------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 33456789999866 5667899999999999999999999999999998 67799999999999998764
No 21
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=98.43 E-value=2.1e-07 Score=67.07 Aligned_cols=68 Identities=15% Similarity=0.181 Sum_probs=52.2
Q ss_pred chHHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhh
Q psy11246 2 EKKDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYS 70 (101)
Q Consensus 2 ~~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~ 70 (101)
+.+.++.+|.+|++.+.+|+..|..|++.- +++++..++.+++.|+.+|..|+.++.++|.+|+.+.+
T Consensus 148 ~h~~~e~dL~~~~~~v~~l~~~a~~L~~~~-~~~~a~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~ 215 (218)
T 3edu_A 148 VHTAFERELHLLGVQVQQFQDVATRLQTAY-AGEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTAD 215 (218)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHHHHHHHHTC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346789999999999999999999998875 46789999999999999999999999999999987654
No 22
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=98.40 E-value=6.8e-07 Score=63.03 Aligned_cols=65 Identities=9% Similarity=0.189 Sum_probs=59.7
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhh
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFY 69 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~ 69 (101)
.+.++++|..|.+.+.++...|+.|++. ++.++..++.+++.++.+|..|+..+..+|.+|+.+.
T Consensus 148 h~~~~~el~~~~~~i~~l~~~~~~L~~~--~~~~~~~I~~~~~~l~~~w~~l~~~~~~R~~~L~~a~ 212 (213)
T 1cun_A 148 HEAFETDFTVHKDRVNDVCANGEDLIKK--NNHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDENS 212 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4578999999999999999999999987 4668899999999999999999999999999998764
No 23
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=98.31 E-value=1.4e-06 Score=67.06 Aligned_cols=82 Identities=13% Similarity=0.169 Sum_probs=74.7
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhhhccCchh
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTLQPGIQYP 82 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L~~~L~El 82 (101)
.+.|+++|.+|++.+..+...|+.++.. +.+++..++.|++.++..|..|+..+..++.||+++.+ .-.|..+..|+
T Consensus 50 h~~le~El~a~e~~v~~v~~~g~~L~~~--~hp~~~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~~-~~qF~~da~e~ 126 (283)
T 3pe0_A 50 YSALMRELELKEKKIKELQNAGDRLLRE--DHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAA-YFQFFSDVREA 126 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHS--CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 4589999999999999999999999875 57789999999999999999999999999999997765 46699999999
Q ss_pred hhhhh
Q psy11246 83 IDTLA 87 (101)
Q Consensus 83 i~WL~ 87 (101)
..||.
T Consensus 127 e~Wl~ 131 (283)
T 3pe0_A 127 EGQLQ 131 (283)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99986
No 24
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=98.29 E-value=2.1e-07 Score=64.75 Aligned_cols=65 Identities=22% Similarity=0.179 Sum_probs=49.4
Q ss_pred cccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhhhccCchhhhhhhhhh
Q psy11246 19 SLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTLQPGIQYPIDTLAFTT 90 (101)
Q Consensus 19 sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L~~~L~Eli~WL~~~~ 90 (101)
|++.+|.+|... +..++.|++.++.||+.|+..+.++|.+|+++.. +..|..+++|+..||....
T Consensus 2 ~~~~~~~~~~~~------a~~I~~r~~~l~~r~~~L~~~a~~R~~~Le~s~~-l~~F~~d~~el~~Wi~ek~ 66 (149)
T 3f31_A 2 SMDPSGVKVLET------AEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYR-FQFFQRDAEELEKWIQEKL 66 (149)
T ss_dssp -----------C------TTHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCccccc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 455677777553 4468999999999999999999999999999994 8999999999999998864
No 25
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1
Probab=98.29 E-value=9.3e-07 Score=57.58 Aligned_cols=62 Identities=19% Similarity=0.403 Sum_probs=57.7
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhH
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSL 66 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe 66 (101)
.++++.+|.+|.+.+.++...|..++.. +..++..+..|.+.|+.||+.++..+..+|.+|+
T Consensus 45 h~~fe~~~~~~~~~i~~l~~~a~~L~~~--~h~~~~~I~~r~~~l~~~w~~L~~~~~~Rr~~L~ 106 (107)
T 2spc_A 45 HEDFDKAINGHEQKIAALQTVADQLIAQ--NHYASNLVDEKRKQVLERWRHLKEGLIEKRSRLG 106 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3588999999999999999999999887 6788999999999999999999999999999996
No 26
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=98.27 E-value=2e-06 Score=62.44 Aligned_cols=79 Identities=14% Similarity=0.073 Sum_probs=68.7
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhhhccCchh
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTLQPGIQYP 82 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L~~~L~El 82 (101)
.+.|+.+|.+|.+.+.+++..+..+ ++++...++.|+..++.+|..|+.-+..+|.+|+ .+-+|.....++
T Consensus 47 H~~le~ei~~~~~~v~~l~~~a~~l-----~~~~~~~i~~rl~~l~~~~~~L~~~a~~R~~~L~----~L~~f~~~~~~~ 117 (210)
T 3pdy_A 47 HRGLHQSIEEFRAKIERARSDEGQL-----SPATRGAYRDCLGRLDLQYAKLLNSSKARLRSLE----SLHSFVAAATKE 117 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGGS-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc-----CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHH
Confidence 3588999999999999999888654 4555566999999999999999999999999998 568899999999
Q ss_pred hhhhhhhh
Q psy11246 83 IDTLAFTT 90 (101)
Q Consensus 83 i~WL~~~~ 90 (101)
..||....
T Consensus 118 ~~Wl~eke 125 (210)
T 3pdy_A 118 LMWLNEKE 125 (210)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998753
No 27
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=98.27 E-value=2e-06 Score=72.62 Aligned_cols=86 Identities=10% Similarity=0.082 Sum_probs=77.0
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHh-------hh
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSV-------TL 75 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~-------~L 75 (101)
.+.++++|.+|++.+..+...|+.++.. +..++..++.|++.++.||..|+..+..+|.+|+.+..... .|
T Consensus 413 h~~f~~el~~~~~~v~~l~~~~~~L~~~--~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~~l~~~q~~~~l~~~f 490 (863)
T 1sjj_A 413 HEAFESDLAAHQDRVEQIAAIAQELNEL--DYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEY 490 (863)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHT--CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC--CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578899999999999999999999854 67789999999999999999999999999999999877775 77
Q ss_pred hccCchhhhhhhhhh
Q psy11246 76 QPGIQYPIDTLAFTT 90 (101)
Q Consensus 76 ~~~L~Eli~WL~~~~ 90 (101)
.....++..||+.+.
T Consensus 491 ~~~a~~~~~Wl~~~e 505 (863)
T 1sjj_A 491 AKRAAPFNNWMEGAM 505 (863)
T ss_dssp HHHTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 788899999999765
No 28
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=98.20 E-value=1.1e-06 Score=64.15 Aligned_cols=61 Identities=11% Similarity=0.253 Sum_probs=50.4
Q ss_pred HHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhH
Q psy11246 4 KDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSL 66 (101)
Q Consensus 4 ~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe 66 (101)
+.++++|++|++.|.++...|+.|+.. +.+++..++.+++.|+.+|..|+..+..++.+|+
T Consensus 163 ~~l~~el~~~~~~v~~v~~~g~~L~~~--~h~~~~~I~~~~~~l~~~W~~L~~l~~~R~~~L~ 223 (224)
T 2iak_A 163 AELMRELEQKEESIKAVQEIAEQLLLE--NHPARLTIEAYRAAMQTQWSWILQLCQCVEQHIQ 223 (224)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHT--TCTTHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 578999999999999999999999885 5678889999999999999999999999999986
No 29
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=98.20 E-value=3.2e-06 Score=69.55 Aligned_cols=84 Identities=10% Similarity=0.069 Sum_probs=76.0
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhhhccCchh
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTLQPGIQYP 82 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L~~~L~El 82 (101)
.+.|+++|.+|++.+..+...|+.++.. +.+.+..++.|++.|+.+|..|+.....++.||+.... .-.|..+.+|.
T Consensus 135 hq~l~~EL~~~e~~i~~v~~~G~~Li~~--~Hpas~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~~-~~QF~~Da~Ea 211 (450)
T 3r6n_A 135 FSIRMSQLEVKEKELNKLKQESDQLVLN--QHPASDKIEAYMDTLQTQWSWILQITKCIDVHLKENAA-YFQFFEEAQST 211 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHchHHHHHHHHHHHHHHHc--CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHH
Confidence 4689999999999999999999999876 67789999999999999999999999999999987654 45899999999
Q ss_pred hhhhhhh
Q psy11246 83 IDTLAFT 89 (101)
Q Consensus 83 i~WL~~~ 89 (101)
-.||.+.
T Consensus 212 esWL~ek 218 (450)
T 3r6n_A 212 EAYLKGL 218 (450)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999853
No 30
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=98.11 E-value=5.6e-06 Score=58.63 Aligned_cols=64 Identities=13% Similarity=0.145 Sum_probs=58.3
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhh
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIF 68 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~ 68 (101)
.++++.+|.+|.+.+.++...|+.++.. +..++..++.+++.++.||..++.++.+++.+|+.+
T Consensus 149 h~~f~~~l~~~~~~i~~l~~~a~~L~~~--~h~~~~~I~~~~~~l~~rw~~l~~~~~~R~~~L~~~ 212 (214)
T 1s35_A 149 FEDFLGSMENNRDKVLSPVDSGNKLVAE--GNLYSDKIKEKVQLIEDRHRKNNEKAQEASVLLRDN 212 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3578899999999999999999999877 567888999999999999999999999999999864
No 31
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=97.94 E-value=1e-05 Score=58.87 Aligned_cols=79 Identities=11% Similarity=0.075 Sum_probs=66.0
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhhhccCchh
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTLQPGIQYP 82 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L~~~L~El 82 (101)
.+.++.+|.+|++-+..++..+..+ .++++..+..+++.++.||..|+..+..+|.+|+ .+..|..++.++
T Consensus 62 h~~~e~ei~~~~~~v~~~~~~~~~~-----~~~~~~~i~~~~~~l~~~~~~L~~~~~~R~~~Le----~l~~F~~~~~~~ 132 (224)
T 2iak_A 62 HKNVHRAIEEFESSLKEAKISEIQM-----TAPLKLSYTDKLHRLESQYAKLLNTSRNQERHLD----TLHNFVTRATNE 132 (224)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGC-----CTTHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHH----HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-----ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHH
Confidence 3578888888887777776554333 2256788999999999999999999999999998 888999999999
Q ss_pred hhhhhhhh
Q psy11246 83 IDTLAFTT 90 (101)
Q Consensus 83 i~WL~~~~ 90 (101)
..||...-
T Consensus 133 ~~Wi~eke 140 (224)
T 2iak_A 133 LIWLNEKE 140 (224)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998764
No 32
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=97.80 E-value=3.8e-05 Score=55.66 Aligned_cols=63 Identities=16% Similarity=0.234 Sum_probs=57.1
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHh
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLI 67 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~ 67 (101)
+..++.++++|++.+.+++..|+.|+.. +.+++..++.+.+.||.+|+.|+.-+.-+..||+.
T Consensus 147 ~~~f~~el~~~~~~v~~l~~~~~~Ll~~--~h~~~~~I~~~~~~l~~~W~~L~~L~~~~e~hLk~ 209 (210)
T 3pdy_A 147 YSALMRELELKEKKIKELQNAGDRLLRE--DHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKE 209 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4578999999999999999999999887 56688899999999999999999999999999865
No 33
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=97.75 E-value=1.7e-05 Score=62.26 Aligned_cols=87 Identities=8% Similarity=0.060 Sum_probs=70.0
Q ss_pred HHHHHHHhhhhhhhhcc---cchhhhhhcccCCc--hhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhh-------
Q psy11246 4 KDLQAEIESHKDVYSSL---NTSGKRLLGSLTSQ--DDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSL------- 71 (101)
Q Consensus 4 ~eLqaeI~sh~~v~~sL---n~tG~~I~~~L~s~--~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~------- 71 (101)
+.++++|+.+...+.++ ...|..++.....+ .+.+.++.+++.++.||..|+..+..++.+|+..-..
T Consensus 289 ~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~i~~~~~~L~~~w~~L~~~~~~R~~~L~~~l~~~~~~~~L 368 (476)
T 1hci_A 289 EQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHANERL 368 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSCSCCTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCcchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 46777788887766666 56778887765211 2566788999999999999999999999999988775
Q ss_pred HhhhhccCchhhhhhhhhh
Q psy11246 72 SVTLQPGIQYPIDTLAFTT 90 (101)
Q Consensus 72 ~~~L~~~L~Eli~WL~~~~ 90 (101)
...|.....++..||.++.
T Consensus 369 ~~~F~~~a~~~~~Wl~e~e 387 (476)
T 1hci_A 369 RRQFAAQANAIGPWIQNKM 387 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3689999999999998874
No 34
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=97.45 E-value=0.00012 Score=52.52 Aligned_cols=58 Identities=19% Similarity=0.381 Sum_probs=48.7
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHH
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIR 62 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR 62 (101)
.++++.++.++.+.+.+|...|..++.. +..++..++.+++.++.||..|+..+.++|
T Consensus 161 h~~f~~~l~~~~~~v~~l~~~~~~L~~~--~h~~~~~I~~~~~~l~~rW~~l~~~l~~rr 218 (218)
T 3fb2_A 161 HEDFDKAINVQEEKIAALQAFADQLIAA--GHYAKGDISSRRNEVLDRWRRLKAQMIEKR 218 (218)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHT--TCTTHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 4578899999999999999999999976 466788999999999999999999988876
No 35
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=97.36 E-value=4.3e-05 Score=64.55 Aligned_cols=87 Identities=7% Similarity=0.008 Sum_probs=67.7
Q ss_pred HHHHHHHhhhhhhhhcccchhhhhhcc---cC--CchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhh-------hh
Q psy11246 4 KDLQAEIESHKDVYSSLNTSGKRLLGS---LT--SQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFY-------SL 71 (101)
Q Consensus 4 ~eLqaeI~sh~~v~~sLn~tG~~I~~~---L~--s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~-------~~ 71 (101)
++++++|.+|++-+.+++..|+.+... .. +..+.+..+.+++.++.||.+|+..+..+|.+|+.+. ..
T Consensus 528 ~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~rw~~L~~~~~~R~~~L~~~l~~~~~~~~l 607 (863)
T 1sjj_A 528 EQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWEHVRQLVPRRDQALMEEHARQQQNERL 607 (863)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCSCCSSSSCCHHHHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 467778888877778888888766542 10 1223445567899999999999999999999999876 55
Q ss_pred HhhhhccCchhhhhhhhhh
Q psy11246 72 SVTLQPGIQYPIDTLAFTT 90 (101)
Q Consensus 72 ~~~L~~~L~Eli~WL~~~~ 90 (101)
+..|....+++..||....
T Consensus 608 ~~~F~~~a~~~~~Wi~e~e 626 (863)
T 1sjj_A 608 RKQFGAQANVIGPWIQTKM 626 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 7888899999999998764
No 36
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=96.41 E-value=0.0019 Score=47.16 Aligned_cols=66 Identities=9% Similarity=0.163 Sum_probs=45.3
Q ss_pred HHHHHHhhhh---hhhhcccchhhhhhcccCCc--hhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhh
Q psy11246 5 DLQAEIESHK---DVYSSLNTSGKRLLGSLTSQ--DDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYS 70 (101)
Q Consensus 5 eLqaeI~sh~---~v~~sLn~tG~~I~~~L~s~--~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~ 70 (101)
.+++.+..+. ..+..++..+..+++...++ .+.+..+.+++.++.||..|+..+..++.+|+.+-.
T Consensus 173 ~~~~~l~~~~~~~~~i~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~W~~L~~~~~~R~~~L~~~l~ 243 (250)
T 1quu_A 173 QFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELA 243 (250)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSCTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4553334433 33444455557777665211 145567899999999999999999999999987643
No 37
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=93.03 E-value=0.056 Score=48.34 Aligned_cols=67 Identities=16% Similarity=0.138 Sum_probs=55.8
Q ss_pred HHHHHHHhhhhhhhh-cccchhhhhhcccCCchhHHHHHHhHHHHH-HHHHHHHHHHHHHHHhhHhhhhhH
Q psy11246 4 KDLQAEIESHKDVYS-SLNTSGKRLLGSLTSQDDAVMLQRRLDEMN-QRWHHLKNRSLAIRMQSLIFYSLS 72 (101)
Q Consensus 4 ~eLqaeI~sh~~v~~-sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN-~RW~~l~~ks~~iR~RLe~~~~~~ 72 (101)
+.++++|.+|++-+. .+...|+.|++. ...++..+..|.+.++ ++|..|+...+.+|.+|+.+-+..
T Consensus 929 ea~e~dl~a~e~ri~~~l~~~a~eL~~~--~y~~~~~I~~R~~~L~~~~W~~L~~la~~Rk~~Le~~lq~~ 997 (1010)
T 1g8x_A 929 EAFDGECQSLEGQSNSDLLSILAQLTEL--NYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERL 997 (1010)
T ss_dssp HHHTTTTTHHHHTHHHHHHHHHHHHHHT--TCTTHHHHHHHHHHHHTTHHHHHHHHTHHHHTTTTTTTSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456778888887766 788888887655 6789999999999996 899999999999999998765543
No 38
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=92.78 E-value=0.02 Score=51.00 Aligned_cols=67 Identities=16% Similarity=0.152 Sum_probs=48.1
Q ss_pred HHHHHHHhhhhhhhh-cccchhhhhhcccCCchhHHHHHHhHHHH-HHHHHHHHHHHHHHHHhhHhhhhhH
Q psy11246 4 KDLQAEIESHKDVYS-SLNTSGKRLLGSLTSQDDAVMLQRRLDEM-NQRWHHLKNRSLAIRMQSLIFYSLS 72 (101)
Q Consensus 4 ~eLqaeI~sh~~v~~-sLn~tG~~I~~~L~s~~Da~~Lq~kLd~m-N~RW~~l~~ks~~iR~RLe~~~~~~ 72 (101)
..++++|.+|++-+. .+...|+.++.. +..++..+..|.+.+ .+||..|+..+..+|.+|+.+-+..
T Consensus 921 ea~e~dl~a~e~ri~~~l~~~a~~L~~~--~y~~~~~I~~R~~~l~~~~W~~L~~~a~~Rr~~L~~~~~~~ 989 (995)
T 2ycu_A 921 EAFDGECQSLEGQSNSDLLSILAQLTEL--NYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERL 989 (995)
T ss_dssp HHHHHHHHHTTTCSCSSHHHHHHHHTTT--HHHHHHHHHHHHTHHHHHHHHHHHSSSCCCC----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467788888887765 777888777554 678899999999999 5999999999999999998765543
No 39
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=91.99 E-value=0.22 Score=40.81 Aligned_cols=43 Identities=7% Similarity=-0.017 Sum_probs=38.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhhhccCchhhhhhhhh
Q psy11246 43 RLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTLQPGIQYPIDTLAFT 89 (101)
Q Consensus 43 kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L~~~L~Eli~WL~~~ 89 (101)
++..+..||.+|+.-+..+|.+|+ .+-+|..+..+...||.+.
T Consensus 70 ~~~~L~~~y~~L~~~a~~Rr~~Le----~L~qFl~d~~ee~~Wi~EK 112 (450)
T 3r6n_A 70 AIYQLEEEYENLLKASFERMDHLR----QLQNIIQATSREIMWINDC 112 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Confidence 577899999999999999999997 4778999999999999875
No 40
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=91.59 E-value=0.38 Score=36.24 Aligned_cols=58 Identities=9% Similarity=0.112 Sum_probs=50.1
Q ss_pred HHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q psy11246 4 KDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRM 63 (101)
Q Consensus 4 ~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~ 63 (101)
..++..|.+|+.-+..++.....+. .. ..+++..+..|...++.||..++.++..++.
T Consensus 168 e~ie~dL~~~e~~i~~l~~~a~~L~-~~-~y~~a~~i~~r~~~l~~~w~~L~~~~~~r~~ 225 (235)
T 2odv_A 168 GEVERDLDKADSMIRLLFNDVQTLK-DG-RHPQGEQMYRRVYRLHKRLVAIRTEYNLRLK 225 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-HT-TCTTHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-hC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678899999999999988877764 44 7999999999999999999999999977764
No 41
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=87.56 E-value=1.3 Score=26.65 Aligned_cols=36 Identities=11% Similarity=0.272 Sum_probs=32.8
Q ss_pred CCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHh
Q psy11246 32 TSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLI 67 (101)
Q Consensus 32 ~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~ 67 (101)
+++.|...|+..+++|-.+...++++..+.++||+.
T Consensus 16 p~~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~~ 51 (53)
T 2yy0_A 16 PENPEIELLRLELAEMKEKYEAIVEENKKLKAKLAQ 51 (53)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 357899999999999999999999999999999863
No 42
>3e7k_A TRPM7 channel; coiled-coil, antiparallel, ION channel, assembly domain, Trp channel, membrane protein; 2.01A {Rattus norvegicus}
Probab=63.89 E-value=14 Score=22.70 Aligned_cols=45 Identities=20% Similarity=0.137 Sum_probs=37.9
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhhhccCchhhhh
Q psy11246 41 QRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTLQPGIQYPIDT 85 (101)
Q Consensus 41 q~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L~~~L~Eli~W 85 (101)
.+|..+|+-+=-++..|++-|++=|-.-..+++.|++-....++=
T Consensus 8 ~eRve~m~~~l~Evnekv~~ik~sL~~LD~~lg~Lqdlsal~v~t 52 (56)
T 3e7k_A 8 FERVEQMSIQIKEVGDRVNYIKRSLQSLDSQIGHLQDLSALTVDT 52 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 568999999999999999999999988889999888765555443
No 43
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=60.46 E-value=23 Score=22.68 Aligned_cols=75 Identities=12% Similarity=0.023 Sum_probs=43.6
Q ss_pred HHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhhhccCc
Q psy11246 5 DLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTLQPGIQ 80 (101)
Q Consensus 5 eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L~~~L~ 80 (101)
+++..|..-...+.-++.. ...+|-++++-+.......++.....-..+.++...++..++........|...+.
T Consensus 28 ~l~~~i~~l~~~l~~l~~~-g~~CPvCgs~l~~~~~~~~i~~~~~~l~~l~~~i~~l~~~i~~l~~~~~~l~~~~~ 102 (112)
T 1l8d_A 28 ELKNKIGDLKTAIEELKKA-KGKCPVCGRELTDEHREELLSKYHLDLNNSKNTLAKLIDRKSELERELRRIDMEIK 102 (112)
T ss_dssp HHHHHHHHHHHHHHHHTTC-SEECTTTCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcC-CCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444443 33467776665555555566666677777777777777777666666666554444
No 44
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=56.40 E-value=17 Score=24.64 Aligned_cols=35 Identities=17% Similarity=0.009 Sum_probs=14.0
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhhh
Q psy11246 42 RRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTLQ 76 (101)
Q Consensus 42 ~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L~ 76 (101)
..++.+...|..+..++..++..++.....+..+.
T Consensus 13 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~~~ 47 (284)
T 1c1g_A 13 LDKENALDRADEAEADKKAAEDRSKQLEDELVSLQ 47 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333344444444444444444443333333333
No 45
>4fi5_A Nucleoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.20A {Hantaan virus}
Probab=49.66 E-value=31 Score=23.81 Aligned_cols=24 Identities=29% Similarity=0.522 Sum_probs=17.6
Q ss_pred CchHHHHHHHhhhhhhhhcccchhhhh
Q psy11246 1 MEKKDLQAEIESHKDVYSSLNTSGKRL 27 (101)
Q Consensus 1 ~~~~eLqaeI~sh~~v~~sLn~tG~~I 27 (101)
|.+++||++|..|+ .-|..+-+++
T Consensus 22 ~~ieeLq~Ei~~~E---~QL~~ArQKL 45 (113)
T 4fi5_A 22 MTMEELQREINAHE---GQLVIARQKV 45 (113)
T ss_dssp CCHHHHHHHHHHHH---HHHHHHHHHH
T ss_pred ccHHHHHHHHHHHH---HHHHHHHHHH
Confidence 67899999999998 4555554443
No 46
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=44.17 E-value=23 Score=31.73 Aligned_cols=47 Identities=11% Similarity=0.050 Sum_probs=36.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhHh-------hhhhHhhhhccCchhhhhhhhh
Q psy11246 43 RLDEMNQRWHHLKNRSLAIRMQSLI-------FYSLSVTLQPGIQYPIDTLAFT 89 (101)
Q Consensus 43 kLd~mN~RW~~l~~ks~~iR~RLe~-------~~~~~~~L~~~L~Eli~WL~~~ 89 (101)
.++++|.+|..+.+-..++...|.+ ......+|.....++-.||...
T Consensus 852 ~~~dL~~~W~~Le~ae~eRe~~L~~el~Rqe~L~~L~qkF~rka~~~e~Wl~ek 905 (1010)
T 1g8x_A 852 TPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTK 905 (1010)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999999877766655544 4556788899999999999875
No 47
>1ez3_A Syntaxin-1A; three helix bundle, endocytosis/exocytosis complex; 1.90A {Rattus norvegicus} SCOP: a.47.2.1 PDB: 1br0_A 3lg7_A*
Probab=41.74 E-value=67 Score=20.54 Aligned_cols=63 Identities=13% Similarity=0.193 Sum_probs=38.9
Q ss_pred HHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhH
Q psy11246 4 KDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLS 72 (101)
Q Consensus 4 ~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~ 72 (101)
.+++.+|..=..-+..|...-..++... ++++ .+..+|+.+. .+|++....+|.+|+.-....
T Consensus 15 ~~I~~~i~~i~~~v~~l~~~~~~~L~~~-~~~~--~~~~~l~~l~---~~i~~~a~~ik~~Lk~l~~~~ 77 (127)
T 1ez3_A 15 EEIRGFIDKIAENVEEVKRKHSAILASP-NPDE--KTKEELEELM---SDIKKTANKVRSKLKSIEQSI 77 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCS-SCCH--HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcC-CccH--HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
Confidence 4566666666655566655555655543 3333 3777766655 577788888888887654443
No 48
>4g59_C M152 protein, retinoic acid early-inducible protein 1-gamma; MHC-I fold, immunoevasion, stress induced ligand, immune SYS; HET: NAG; 2.44A {Murid herpesvirus 1}
Probab=41.38 E-value=27 Score=27.94 Aligned_cols=41 Identities=12% Similarity=0.288 Sum_probs=32.4
Q ss_pred cchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHH
Q psy11246 21 NTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIR 62 (101)
Q Consensus 21 n~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR 62 (101)
|.+|..|.. ...+.+-.+|...-..+-.||..+|++.+++-
T Consensus 139 ~~s~d~i~~-~AkG~gV~~Lknhs~~I~~RWrsiC~ki~~Ld 179 (321)
T 4g59_C 139 DVSEDDIAR-YGQGSGISILRDNAALLQKRWTSFCRKIVAMD 179 (321)
T ss_dssp TSCHHHHHH-HTTCSCHHHHHTTHHHHHHHHHHHHHHHHHHC
T ss_pred cccccccee-ccCccchHhhhhhhHHHHHHHHHHHHHHHHhc
Confidence 455555544 33677788999999999999999999998764
No 49
>2dnx_A Syntaxin-12; snare, HABC domain, UP and DOWN three helix bundle, LEFT-handed twist, membrane fusion, vesicle transport, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.87 E-value=78 Score=21.20 Aligned_cols=66 Identities=14% Similarity=0.153 Sum_probs=46.1
Q ss_pred chHHHHHHHhhhhhhhhcccchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHh
Q psy11246 2 EKKDLQAEIESHKDVYSSLNTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLI 67 (101)
Q Consensus 2 ~~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~ 67 (101)
++..|-..|.+.---+.+--.+=++++..|+++-|...|.++|-.+...=+.+.+.+...=.+|..
T Consensus 11 ef~~l~~~is~~I~~In~~vs~l~r~v~~LGT~kDt~~LR~kl~~~~~~t~~l~k~ts~~lk~L~~ 76 (130)
T 2dnx_A 11 DFSSIIQTCSGNIQRISQATAQIKNLMSQLGTKQDSSKLQENLQQLQHSTNQLAKETNELLKELGS 76 (130)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 355666677665422222212228889999999999999999999888888887777766555554
No 50
>3azd_A Short alpha-tropomyosin, transcription factor GCN; coiled-coil, actin-binding protein, muscle protein; 0.98A {Rattus norvegicus} PDB: 1ihq_A 2k8x_A
Probab=40.37 E-value=28 Score=19.19 Aligned_cols=30 Identities=7% Similarity=0.048 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHhhHhhhhhHhhhhccCch
Q psy11246 52 HHLKNRSLAIRMQSLIFYSLSVTLQPGIQY 81 (101)
Q Consensus 52 ~~l~~ks~~iR~RLe~~~~~~~~L~~~L~E 81 (101)
.+|++|...++.-++...+.+..++..|+|
T Consensus 7 ~avKkKiq~lq~q~d~aee~~~~~~~~l~~ 36 (37)
T 3azd_A 7 EAVRRKIRSLQEQNYHLENEVARLKKLVGE 36 (37)
T ss_dssp HHHHHHHHHHHHHTTTTHHHHHHHHTTTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 368889999998888888888888887765
No 51
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=38.80 E-value=69 Score=23.81 Aligned_cols=39 Identities=18% Similarity=0.170 Sum_probs=32.0
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhh
Q psy11246 37 AVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTL 75 (101)
Q Consensus 37 a~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L 75 (101)
-..|+.+++.++.++--+.+...|.|+|.+.......++
T Consensus 68 l~~l~~e~~el~d~~lR~~AEfeN~RkR~~rE~e~~~~~ 106 (213)
T 4ani_A 68 IAELEAKLSEMEHRYLRLYADFENFRRRTRQEMEAAEKY 106 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355788888899999999999999999998776655543
No 52
>2zvf_A Alanyl-tRNA synthetase; C-terminal, oligomerization domain, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding; 3.20A {Archaeoglobus fulgidus}
Probab=36.39 E-value=62 Score=21.83 Aligned_cols=42 Identities=7% Similarity=0.180 Sum_probs=33.5
Q ss_pred hhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhh
Q psy11246 25 KRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIF 68 (101)
Q Consensus 25 ~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~ 68 (101)
..|...|..+++ .+..|++.+...+.+++++...++..+...
T Consensus 17 ~~~a~~Lk~~~~--~l~~~v~~l~~e~k~l~ke~~~l~~~~a~~ 58 (171)
T 2zvf_A 17 REASSILRVEPA--KLPKTVERFFEEWKDQRKEIERLKSVIADL 58 (171)
T ss_dssp HHHHHTTTCCTT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCChH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666644443 789999999999999999999999988654
No 53
>2yfv_C SCM3, KLLA0F05115P; cell cycle, kinetochore, centromere, histone chaperone, BUDD; 2.32A {Kluyveromyces lactis nrrl y-1140}
Probab=35.16 E-value=32 Score=21.51 Aligned_cols=34 Identities=18% Similarity=0.425 Sum_probs=21.6
Q ss_pred hhhcccCCchhHHHHHH-hHHHHHHHHHHHHHHHHH
Q psy11246 26 RLLGSLTSQDDAVMLQR-RLDEMNQRWHHLKNRSLA 60 (101)
Q Consensus 26 ~I~~~L~s~~Da~~Lq~-kLd~mN~RW~~l~~ks~~ 60 (101)
.++|+| +-++...... -...|-+.|+.|..|-..
T Consensus 13 ~~iP~l-sdeevme~hk~adermK~~w~~Ii~KY~~ 47 (63)
T 2yfv_C 13 RLIPKL-SDEEVMERHKKADENMKRVWSQIIQKYES 47 (63)
T ss_dssp CEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cCCCcc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 467888 4444333322 234588999999988653
No 54
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=34.95 E-value=67 Score=21.93 Aligned_cols=23 Identities=30% Similarity=0.505 Sum_probs=17.2
Q ss_pred chHHHHHHHhhhhhhhhcccchhhhh
Q psy11246 2 EKKDLQAEIESHKDVYSSLNTSGKRL 27 (101)
Q Consensus 2 ~~~eLqaeI~sh~~v~~sLn~tG~~I 27 (101)
..++||++|..|+ .-|..+.+++
T Consensus 36 ~ieeLQ~Ei~~~E---~QL~iArQKL 58 (107)
T 2k48_A 36 TLQELQENITAHE---QQLVTARQKL 58 (107)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHH
Confidence 3689999999999 5666665554
No 55
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=32.74 E-value=48 Score=29.54 Aligned_cols=48 Identities=10% Similarity=-0.000 Sum_probs=36.6
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHhhHhh-------hhhHhhhhccCchhhhhhhhh
Q psy11246 42 RRLDEMNQRWHHLKNRSLAIRMQSLIF-------YSLSVTLQPGIQYPIDTLAFT 89 (101)
Q Consensus 42 ~kLd~mN~RW~~l~~ks~~iR~RLe~~-------~~~~~~L~~~L~Eli~WL~~~ 89 (101)
.++++++.+|..+.+...++..-|.++ .....+|....++.-.||.+.
T Consensus 843 l~~~~L~~~W~~L~~ae~er~~~L~~el~RlerL~~la~kf~~ka~~~e~Wl~ek 897 (995)
T 2ycu_A 843 LTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTK 897 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTGGGGCCCCCCCHHHHH
T ss_pred ccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457899999999987776665555433 445678899999999999763
No 56
>2a3d_A Protein (de novo three-helix bundle); NMR {Synthetic construct} SCOP: k.9.1.1
Probab=31.27 E-value=37 Score=21.34 Aligned_cols=18 Identities=28% Similarity=0.490 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHhhHh
Q psy11246 50 RWHHLKNRSLAIRMQSLI 67 (101)
Q Consensus 50 RW~~l~~ks~~iR~RLe~ 67 (101)
.|.+.|.++..|+.||.+
T Consensus 3 swaefkqrlaaiktrlqa 20 (73)
T 2a3d_A 3 SWAEFKQRLAAIKTRLQA 20 (73)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 599999999999999863
No 57
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=30.25 E-value=1.6e+02 Score=21.54 Aligned_cols=51 Identities=10% Similarity=-0.007 Sum_probs=30.2
Q ss_pred cCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhhhccCch
Q psy11246 31 LTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTLQPGIQY 81 (101)
Q Consensus 31 L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L~~~L~E 81 (101)
..++-+-..|+..++.+..+=..+-.+..+.-.++++.......+...+.+
T Consensus 86 v~~~kE~~aL~kEie~~~~~i~~lE~eile~~e~ie~~~~~l~~~~~~l~~ 136 (256)
T 3na7_A 86 IKSERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLE 136 (256)
T ss_dssp CSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 335666667777777777666666666666666665555544444444333
No 58
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=29.02 E-value=1.2e+02 Score=19.73 Aligned_cols=43 Identities=12% Similarity=0.125 Sum_probs=34.9
Q ss_pred chhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhhh
Q psy11246 34 QDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTLQ 76 (101)
Q Consensus 34 ~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L~ 76 (101)
.+--.+|.+|++.++.+=..+.+....+|.++..-.+.+.+++
T Consensus 87 ~eA~~~l~~r~~~l~~~~~~l~~~l~~l~~~i~~~~~~l~~~~ 129 (133)
T 1fxk_C 87 EDAMESIKSQKNELESTLQKMGENLRAITDIMMKLSPQAEELL 129 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3445789999999999999999999999999887777666654
No 59
>2ic6_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 1.15A {Sin nombre virus}
Probab=28.16 E-value=1.1e+02 Score=19.63 Aligned_cols=23 Identities=30% Similarity=0.447 Sum_probs=17.5
Q ss_pred chHHHHHHHhhhhhhhhcccchhhhh
Q psy11246 2 EKKDLQAEIESHKDVYSSLNTSGKRL 27 (101)
Q Consensus 2 ~~~eLqaeI~sh~~v~~sLn~tG~~I 27 (101)
..++||++|..|+ .-|..+.+++
T Consensus 6 ~l~eLq~e~~~~E---~QL~~A~QKL 28 (78)
T 2ic6_A 6 TLKEVQDNITLHE---QRLVTTRQKL 28 (78)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHH
Confidence 4689999999999 6666665555
No 60
>1hs7_A Syntaxin VAM3; UP-and-DOWN three-helix bundle insertion preceding proline in AN alpha-helix, endocytosis/exocytosis complex; NMR {Saccharomyces cerevisiae} SCOP: a.47.2.1
Probab=27.82 E-value=81 Score=20.76 Aligned_cols=35 Identities=11% Similarity=0.237 Sum_probs=29.0
Q ss_pred hhhhcccCCchhHHHHHHhHH-HHHHHHHHHHHHHH
Q psy11246 25 KRLLGSLTSQDDAVMLQRRLD-EMNQRWHHLKNRSL 59 (101)
Q Consensus 25 ~~I~~~L~s~~Da~~Lq~kLd-~mN~RW~~l~~ks~ 59 (101)
++++.++++.-|...|+.+++ .+-..=+.+.+++.
T Consensus 23 ~k~~~qlGTkrD~~~LR~~l~~~l~~~~~~L~k~~~ 58 (97)
T 1hs7_A 23 EKECTKIGSKRDSKELRYKIETELIPNCTSVRDKIE 58 (97)
T ss_dssp HHHHHHTTSSSCCHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567889999999999999999 77777777776666
No 61
>1rtm_1 Mannose-binding protein-A; lectin; 1.80A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1 PDB: 1kwu_A* 1kwv_A* 1kwt_A* 1kwx_A* 1kwy_A* 1kx1_A* 1kww_A 1kwz_A* 1kx0_A* 3kmb_1* 1kmb_1* 2kmb_1* 4kmb_1* 1afb_1* 1afa_1* 1afd_1 1bch_1* 1bcj_1* 1fif_A 1fih_A*
Probab=26.78 E-value=80 Score=20.34 Aligned_cols=24 Identities=17% Similarity=0.242 Sum_probs=18.9
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHH
Q psy11246 40 LQRRLDEMNQRWHHLKNRSLAIRM 63 (101)
Q Consensus 40 Lq~kLd~mN~RW~~l~~ks~~iR~ 63 (101)
|+++|..|......|..++..++.
T Consensus 2 ~~~~l~~l~~~~~~l~~~l~~l~~ 25 (149)
T 1rtm_1 2 IEVKLANMEAEINTLKSKLELTNK 25 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 677888888888888888777775
No 62
>2ic9_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 2.00A {Sin nombre virus}
Probab=26.73 E-value=1.2e+02 Score=20.27 Aligned_cols=23 Identities=30% Similarity=0.447 Sum_probs=17.4
Q ss_pred chHHHHHHHhhhhhhhhcccchhhhh
Q psy11246 2 EKKDLQAEIESHKDVYSSLNTSGKRL 27 (101)
Q Consensus 2 ~~~eLqaeI~sh~~v~~sLn~tG~~I 27 (101)
..++||++|..|+ .-|..+.+++
T Consensus 6 ~i~eLq~e~~~~E---~QL~~A~QKL 28 (96)
T 2ic9_A 6 TLKEVQDNITLHE---QRLVTTRQKL 28 (96)
T ss_dssp THHHHHHHHHHHH---HHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHH
Confidence 4689999999998 5566665554
No 63
>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber}
Probab=26.48 E-value=75 Score=23.86 Aligned_cols=43 Identities=9% Similarity=-0.011 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhhhcc---Cchhhhhh
Q psy11246 44 LDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTLQPG---IQYPIDTL 86 (101)
Q Consensus 44 Ld~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L~~~---L~Eli~WL 86 (101)
++.+...+..+-.++.++..|+..-.+...+|+.. ++++..|.
T Consensus 94 ~~~~e~~~~~l~~~~~~l~~~~~~L~~~~~~l~~~~~~l~~L~p~~ 139 (357)
T 3rrk_A 94 LEEAEAVLRPVASRAEVLGKERAALEEEIQTIELFGKAAEKLAALA 139 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhh
Confidence 55666667888888888888888777777888777 77777776
No 64
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=25.68 E-value=1.2e+02 Score=18.71 Aligned_cols=70 Identities=13% Similarity=0.169 Sum_probs=43.7
Q ss_pred hHHHHHHHhhhhhhhhcc---cch-------hhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhH
Q psy11246 3 KKDLQAEIESHKDVYSSL---NTS-------GKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLS 72 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sL---n~t-------G~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~ 72 (101)
.+.++.++.-|..+...| +.. |..+|..- -.+--..|..+.+.+..+=..+.++...++..++.....+
T Consensus 24 ~~~l~~~~~e~~~~~~EL~~l~~d~~vy~~iG~vfv~~~-~~e~~~~L~~~~e~i~~~i~~le~~~~~~~~~l~~lk~~l 102 (107)
T 1fxk_A 24 KQTVEMQINETQKALEELSRAADDAEVYKSSGNILIRVA-KDELTEELQEKLETLQLREKTIERQEERVMKKLQEMQVNI 102 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTTCCEEEEETTEEEEEC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCchHHHHHhHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666666666664433 322 34444442 3555667888888888777777777777777776665554
Q ss_pred h
Q psy11246 73 V 73 (101)
Q Consensus 73 ~ 73 (101)
.
T Consensus 103 ~ 103 (107)
T 1fxk_A 103 Q 103 (107)
T ss_dssp H
T ss_pred H
Confidence 3
No 65
>3q0x_A Centriole protein; centrosome protein, coiled coil mediated dimer, structural P; 3.02A {Chlamydomonas reinhardtii}
Probab=25.04 E-value=1.4e+02 Score=22.51 Aligned_cols=32 Identities=3% Similarity=-0.025 Sum_probs=12.6
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhH
Q psy11246 41 QRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLS 72 (101)
Q Consensus 41 q~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~ 72 (101)
+.|+..+++.=..++.+..+.+++|+.-..++
T Consensus 177 K~kl~~l~~~L~~~~~e~~s~~~~~~~~~~~~ 208 (228)
T 3q0x_A 177 KGTCHDLSDDLSRTRDDRDSMVAQLAQCRQQL 208 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333344444444444333333
No 66
>1fzc_B Fibrin; blood coagulation, plasma protein, crosslinking; HET: NAG MAN; 2.30A {Homo sapiens} SCOP: d.171.1.1 h.1.8.1 PDB: 1fzb_B* 1fza_B* 1fze_B* 1fzf_B* 1fzg_B* 1n86_B* 1n8e_B 2h43_B* 2hlo_B* 2hod_B* 2hpc_B* 2q9i_B* 2xnx_B 2xny_B 3e1i_B* 2z4e_B* 2oyh_B* 1ltj_B* 1rf0_B* 1lt9_B* ...
Probab=24.68 E-value=1.1e+02 Score=24.01 Aligned_cols=27 Identities=15% Similarity=0.199 Sum_probs=22.0
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHhh
Q psy11246 39 MLQRRLDEMNQRWHHLKNRSLAIRMQS 65 (101)
Q Consensus 39 ~Lq~kLd~mN~RW~~l~~ks~~iR~RL 65 (101)
.||..++.++.+-+.|..++..+...+
T Consensus 34 ~Lq~~le~l~~KIq~Le~~v~~~~~~~ 60 (328)
T 1fzc_B 34 VLRSILENLRSKIQKLESDVSAQMEYC 60 (328)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 378888889999999988888776654
No 67
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=24.36 E-value=1.7e+02 Score=19.70 Aligned_cols=46 Identities=11% Similarity=0.106 Sum_probs=38.5
Q ss_pred chhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhhhccC
Q psy11246 34 QDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTLQPGI 79 (101)
Q Consensus 34 ~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L~~~L 79 (101)
.+--.++.+|++.++.+=..+.+....++.++..-.....+++..+
T Consensus 97 ~eA~~~l~~ri~~l~~~l~~l~~~l~~l~~~i~~~~~~l~~l~~~~ 142 (151)
T 2zdi_C 97 DEAISFLEKRLKEYDEAIKKTQGALAELEKRIGEVARKAQEVQQKQ 142 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455789999999999999999999999999988888777776543
No 68
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=24.04 E-value=1.6e+02 Score=19.50 Aligned_cols=41 Identities=15% Similarity=0.063 Sum_probs=23.3
Q ss_pred hhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhHhhh
Q psy11246 35 DDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLSVTL 75 (101)
Q Consensus 35 ~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~~~L 75 (101)
+|.-.|-++.-.-.+-...|+.++.++|.+|+.......+|
T Consensus 4 ~e~~~~~~~~~~~e~e~~~l~~~~~el~~~l~~~~~~~~e~ 44 (125)
T 1joc_A 4 DERRALLERCLKGEGEIEKLQTKVLELQRKLDNTTAAVQEL 44 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444445555555556677777777777776554444333
No 69
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=23.29 E-value=2.6e+02 Score=21.61 Aligned_cols=79 Identities=11% Similarity=0.195 Sum_probs=48.5
Q ss_pred hHHHHHHHhhhhhhhhcccchhhhhhcccCC--------------------chhHHHHHHhHHHHHHHHHHHHHHHHHHH
Q psy11246 3 KKDLQAEIESHKDVYSSLNTSGKRLLGSLTS--------------------QDDAVMLQRRLDEMNQRWHHLKNRSLAIR 62 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sLn~tG~~I~~~L~s--------------------~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR 62 (101)
++++++.++.++......+..=+...++.+. .+-...++...+.|++-|.....+...++
T Consensus 369 ~~~le~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (487)
T 3oja_A 369 KKALDEQVSNGRRAHAELDGTLQQAVGQIELQHATEEQSPLQLLRAIVKRYEEMYVEQQSVQNNAIRDWDMYQHKETQLA 448 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhhhhHHHhhchhhhcccccccCcHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhHHHHHH
Confidence 3477777777776665555554555555542 12334466667779999999988888877
Q ss_pred HhhHhhhhhHhhhhccCch
Q psy11246 63 MQSLIFYSLSVTLQPGIQY 81 (101)
Q Consensus 63 ~RLe~~~~~~~~L~~~L~E 81 (101)
.+=+.......++...+.+
T Consensus 449 ~~~~~~~~~~~~~~~~~~~ 467 (487)
T 3oja_A 449 EENARLKKLNGEADLALAS 467 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhhhhhhhhhhhhhHh
Confidence 7444444444444444444
No 70
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=22.31 E-value=1.2e+02 Score=22.43 Aligned_cols=46 Identities=13% Similarity=0.116 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHHHHH-------HhhHhhhhhHhhhhccCchhhhhhhhh
Q psy11246 44 LDEMNQRWHHLKNRSLAIR-------MQSLIFYSLSVTLQPGIQYPIDTLAFT 89 (101)
Q Consensus 44 Ld~mN~RW~~l~~ks~~iR-------~RLe~~~~~~~~L~~~L~Eli~WL~~~ 89 (101)
+.++|.+|..+-+--+++. .|+|.-.....+|+......-.||...
T Consensus 95 ~~di~~~W~~Le~ae~eRe~aL~~el~RlerLe~La~kf~rka~~~e~~L~~~ 147 (235)
T 2odv_A 95 PLDVEKEWGKLHVAILEREKQLRSEFERLEALQRIVTKLQMEAGLAEEQLNQA 147 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5589999999987555443 244555667788888888888888754
No 71
>3k9a_A HIV glycoprotein GP41; membrane proximal external region, MPER, viral PR; 2.10A {Human immunodeficiency virus 1}
Probab=22.27 E-value=1.9e+02 Score=19.56 Aligned_cols=52 Identities=15% Similarity=0.138 Sum_probs=30.3
Q ss_pred HHHH-HHHHHHHHHHHhhHhhhhhHhhhhccCchhhhhhhhhhhhhhhhhhhc
Q psy11246 49 QRWH-HLKNRSLAIRMQSLIFYSLSVTLQPGIQYPIDTLAFTTLSDITSLIWY 100 (101)
Q Consensus 49 ~RW~-~l~~ks~~iR~RLe~~~~~~~~L~~~L~Eli~WL~~~~~~~~~~~~~~ 100 (101)
.-|. +|.+-+..|=.=||++..+=.+=...|-++-.|=.--.--|||...||
T Consensus 48 mqWeKEI~NyT~~Iy~LLEeSQnQQEKNEqeLL~LdkWasLWnWFdIt~W~~~ 100 (108)
T 3k9a_A 48 SEWEREISNYTDIIYRLIEESQNQQEKNEQELLALDKWASLWNWFDITNWLWY 100 (108)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC------
T ss_pred ccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 3443 466666667777777766666666667777777555555689999998
No 72
>1dkg_A Nucleotide exchange factor GRPE; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: b.73.1.1 h.1.9.1
Probab=21.71 E-value=2.1e+02 Score=20.63 Aligned_cols=39 Identities=13% Similarity=0.107 Sum_probs=29.9
Q ss_pred HHHHHHhHHHHH----HHHHHHHHHHHHHHHhhHhhhhhHhhh
Q psy11246 37 AVMLQRRLDEMN----QRWHHLKNRSLAIRMQSLIFYSLSVTL 75 (101)
Q Consensus 37 a~~Lq~kLd~mN----~RW~~l~~ks~~iR~RLe~~~~~~~~L 75 (101)
...|+.+++.+. .++--+.+...|.|+|.+...+...++
T Consensus 44 ~~~l~~~l~e~~~~~~d~~lR~~Ae~eN~rkR~~ke~~~~~~~ 86 (197)
T 1dkg_A 44 VANLEAQLAEAQTRERDGILRVKAEMENLRRRTELDIEKAHKF 86 (197)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677777776 589899999999999999776655443
No 73
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=21.49 E-value=2.2e+02 Score=21.45 Aligned_cols=41 Identities=22% Similarity=0.320 Sum_probs=21.4
Q ss_pred cchhhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhH
Q psy11246 21 NTSGKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSL 66 (101)
Q Consensus 21 n~tG~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe 66 (101)
...++.|-.+|.+.-| -|+.+|..++ ..|+.++.+.|++++
T Consensus 186 ~p~ae~lr~~l~~~~e--~l~~~l~~~~---~~~~qq~e~f~~~~~ 226 (273)
T 3s84_A 186 APLAEDVRGNLRGNTE--GLQKSLAELG---GHLDQQVEEFRRRVE 226 (273)
T ss_dssp HHHHHHHHHTSSSCHH--HHHHHHHHHH---HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHH--HHHHhHHHHH---HHHHHHHHHHHHHhH
Confidence 3334444444433222 3466666666 556666666666664
No 74
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=20.95 E-value=1.6e+02 Score=18.38 Aligned_cols=73 Identities=11% Similarity=0.206 Sum_probs=44.7
Q ss_pred hHHHHHHHhhhhhhhhcc---cch-------hhhhhcccCCchhHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhhH
Q psy11246 3 KKDLQAEIESHKDVYSSL---NTS-------GKRLLGSLTSQDDAVMLQRRLDEMNQRWHHLKNRSLAIRMQSLIFYSLS 72 (101)
Q Consensus 3 ~~eLqaeI~sh~~v~~sL---n~t-------G~~I~~~L~s~~Da~~Lq~kLd~mN~RW~~l~~ks~~iR~RLe~~~~~~ 72 (101)
.+.|+..+.-|..+...| +.. |..+|..- -.+--..|..+.+.+...=..+.++...++..++.....+
T Consensus 29 ~~~l~~~~~e~~~~~~eL~~l~~d~~vy~~iG~vfv~~~-~~ea~~~L~~~~e~ie~~i~~le~~~~~l~~~l~~lk~~l 107 (117)
T 2zqm_A 29 KQKVQLELTEAKKALDEIESLPDDAVVYKTVGTLIVKTT-KDKAVAELKEKIETLEVRLNALERQEKKLNEKLKELTAQI 107 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCTTCCEEEEETTEEEEEC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHhHHHhhHHHhhcc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666666666664433 332 33333332 3455567788888887777777777777777777666665
Q ss_pred hhhh
Q psy11246 73 VTLQ 76 (101)
Q Consensus 73 ~~L~ 76 (101)
.+..
T Consensus 108 ~~~~ 111 (117)
T 2zqm_A 108 QSAL 111 (117)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 75
>1lq7_A Alpha3W; three helix bundle, de novo protein; NMR {} SCOP: k.9.1.1
Probab=20.75 E-value=68 Score=19.81 Aligned_cols=20 Identities=25% Similarity=0.742 Sum_probs=15.5
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q psy11246 43 RLDEMNQRWHHLKNRSLAIR 62 (101)
Q Consensus 43 kLd~mN~RW~~l~~ks~~iR 62 (101)
|...+...|.+++++..++-
T Consensus 26 rieelkkkweelkkkieelg 45 (67)
T 1lq7_A 26 RIEELKKKWEELKKKIEELG 45 (67)
T ss_dssp SHHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHHhC
Confidence 45667788999999987753
Done!