BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11248
(227 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q66JG8|ALKB5_XENTR RNA demethylase ALKBH5 OS=Xenopus tropicalis GN=alkbh5 PE=2 SV=1
Length = 358
Score = 243 bits (621), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 107/158 (67%), Positives = 130/158 (82%)
Query: 1 GYTYGSQLVRKGLGNERLYPEGEVDPIPAWIQSLVITKLEQMGVVPPNYINSAVINDYQP 60
GYTYG+QL R+G G ERLYP+GEVD IPAW+ LVI +L + V+P ++NSAVINDYQP
Sbjct: 104 GYTYGAQLQRRGPGQERLYPKGEVDEIPAWVNELVIRRLVEHRVIPEGFVNSAVINDYQP 163
Query: 61 GGCIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKPIRVSEPVLYLPVQRGCVTLLR 120
GGCIVSH+DP HIF+RPI+S+S FSDSALCFGCKF FKPIRVSEPV +LPVQRG VT+L
Sbjct: 164 GGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVFFLPVQRGSVTVLS 223
Query: 121 DFAANGITHCVRPQDTQYRRAVILLRRVLPHAPRLTLS 158
+AA+ ITHC+RPQD + RRAV++LR+ APRL +
Sbjct: 224 GYAADEITHCIRPQDIKERRAVVILRKTRTEAPRLEMK 261
>sp|Q6GPB5|ALKB5_XENLA RNA demethylase ALKBH5 OS=Xenopus laevis GN=alkbh5 PE=2 SV=1
Length = 360
Score = 241 bits (614), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 104/158 (65%), Positives = 129/158 (81%)
Query: 1 GYTYGSQLVRKGLGNERLYPEGEVDPIPAWIQSLVITKLEQMGVVPPNYINSAVINDYQP 60
GYTYG+QL R+G G ERLYP+GEVD IP W+ LVI +L + ++P ++NSAVINDYQP
Sbjct: 106 GYTYGAQLQRRGPGQERLYPKGEVDEIPGWVHELVIRRLVERRIIPEGFVNSAVINDYQP 165
Query: 61 GGCIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKPIRVSEPVLYLPVQRGCVTLLR 120
GGCIVSH+DP HIF+RPI+S+S FSDSALCFGCKF FKPIRVSEPV +LPV+RG VT+L
Sbjct: 166 GGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVFFLPVRRGSVTVLS 225
Query: 121 DFAANGITHCVRPQDTQYRRAVILLRRVLPHAPRLTLS 158
+AA+ ITHC+RPQD + RRAV++LR+ APRL +
Sbjct: 226 GYAADEITHCIRPQDIKERRAVVILRKTRTEAPRLEMK 263
>sp|Q08BA6|ALKB5_DANRE RNA demethylase ALKBH5 OS=Danio rerio GN=alkbh5 PE=2 SV=1
Length = 352
Score = 238 bits (606), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 106/155 (68%), Positives = 128/155 (82%)
Query: 1 GYTYGSQLVRKGLGNERLYPEGEVDPIPAWIQSLVITKLEQMGVVPPNYINSAVINDYQP 60
GYTYG+QL ++G G ERLY +GEVD IP W+ LVI +L GV+P ++NSAVINDYQP
Sbjct: 106 GYTYGAQLEKRGPGQERLYSKGEVDDIPDWVHELVIDRLVTHGVIPEGFVNSAVINDYQP 165
Query: 61 GGCIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKPIRVSEPVLYLPVQRGCVTLLR 120
GGCIVSH+DP HIF+RPI+S+S FSDSALCFGCKF FKPIRVSEPVL+LPV+RG VT+L
Sbjct: 166 GGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFLFKPIRVSEPVLHLPVRRGSVTVLS 225
Query: 121 DFAANGITHCVRPQDTQYRRAVILLRRVLPHAPRL 155
+AA+ ITHC+RPQD + RRAVI+LR+ APRL
Sbjct: 226 GYAADDITHCIRPQDIKERRAVIILRKTRADAPRL 260
>sp|D3ZKD3|ALKB5_RAT RNA demethylase ALKBH5 OS=Rattus norvegicus GN=Alkbh5 PE=3 SV=1
Length = 395
Score = 236 bits (602), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 106/155 (68%), Positives = 127/155 (81%)
Query: 1 GYTYGSQLVRKGLGNERLYPEGEVDPIPAWIQSLVITKLEQMGVVPPNYINSAVINDYQP 60
GYTYG+QL ++G G ERLYP G+VD IP W+ LVI KL + V+P ++NSAVINDYQP
Sbjct: 139 GYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFVNSAVINDYQP 198
Query: 61 GGCIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKPIRVSEPVLYLPVQRGCVTLLR 120
GGCIVSH+DP HIF+RPI+S+S FSDSALCFGCKF FKPIRVSEPVL LPV+RG VT+L
Sbjct: 199 GGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVLSLPVRRGSVTVLS 258
Query: 121 DFAANGITHCVRPQDTQYRRAVILLRRVLPHAPRL 155
+AA+ ITHC+RPQD + RRAVI+LR+ APRL
Sbjct: 259 GYAADEITHCIRPQDIKERRAVIILRKTRLDAPRL 293
>sp|Q3TSG4|ALKB5_MOUSE RNA demethylase ALKBH5 OS=Mus musculus GN=Alkbh5 PE=1 SV=2
Length = 395
Score = 236 bits (601), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 106/155 (68%), Positives = 127/155 (81%)
Query: 1 GYTYGSQLVRKGLGNERLYPEGEVDPIPAWIQSLVITKLEQMGVVPPNYINSAVINDYQP 60
GYTYG+QL ++G G ERLYP G+VD IP W+ LVI KL + V+P ++NSAVINDYQP
Sbjct: 139 GYTYGAQLQKRGPGQERLYPPGDVDEIPDWVHQLVIQKLVEHRVIPEGFVNSAVINDYQP 198
Query: 61 GGCIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKPIRVSEPVLYLPVQRGCVTLLR 120
GGCIVSH+DP HIF+RPI+S+S FSDSALCFGCKF FKPIRVSEPVL LPV+RG VT+L
Sbjct: 199 GGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVLSLPVRRGSVTVLS 258
Query: 121 DFAANGITHCVRPQDTQYRRAVILLRRVLPHAPRL 155
+AA+ ITHC+RPQD + RRAVI+LR+ APRL
Sbjct: 259 GYAADEITHCIRPQDIKERRAVIILRKTRLDAPRL 293
>sp|Q6P6C2|ALKB5_HUMAN RNA demethylase ALKBH5 OS=Homo sapiens GN=ALKBH5 PE=1 SV=2
Length = 394
Score = 236 bits (601), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 106/155 (68%), Positives = 127/155 (81%)
Query: 1 GYTYGSQLVRKGLGNERLYPEGEVDPIPAWIQSLVITKLEQMGVVPPNYINSAVINDYQP 60
GYTYG+QL ++G G ERLYP G+VD IP W+ LVI KL + V+P ++NSAVINDYQP
Sbjct: 138 GYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFVNSAVINDYQP 197
Query: 61 GGCIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKPIRVSEPVLYLPVQRGCVTLLR 120
GGCIVSH+DP HIF+RPI+S+S FSDSALCFGCKF FKPIRVSEPVL LPV+RG VT+L
Sbjct: 198 GGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVLSLPVRRGSVTVLS 257
Query: 121 DFAANGITHCVRPQDTQYRRAVILLRRVLPHAPRL 155
+AA+ ITHC+RPQD + RRAVI+LR+ APRL
Sbjct: 258 GYAADEITHCIRPQDIKERRAVIILRKTRLDAPRL 292
>sp|E1BH29|ALKB5_BOVIN RNA demethylase ALKBH5 OS=Bos taurus GN=ALKBH5 PE=3 SV=1
Length = 394
Score = 235 bits (599), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 106/155 (68%), Positives = 127/155 (81%)
Query: 1 GYTYGSQLVRKGLGNERLYPEGEVDPIPAWIQSLVITKLEQMGVVPPNYINSAVINDYQP 60
GYTYG+QL ++G G ERLYP G+VD IP W+ LVI KL + V+P ++NSAVINDYQP
Sbjct: 138 GYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFVNSAVINDYQP 197
Query: 61 GGCIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKPIRVSEPVLYLPVQRGCVTLLR 120
GGCIVSH+DP HIF+RPI+S+S FSDSALCFGCKF FKPIRVSEPVL LPV+RG VT+L
Sbjct: 198 GGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVLSLPVRRGSVTVLS 257
Query: 121 DFAANGITHCVRPQDTQYRRAVILLRRVLPHAPRL 155
+AA+ ITHC+RPQD + RRAVI+LR+ APRL
Sbjct: 258 GYAADEITHCIRPQDIKERRAVIILRKTRLDAPRL 292
>sp|Q80Y20|ALKB8_MOUSE Alkylated DNA repair protein alkB homolog 8 OS=Mus musculus
GN=Alkbh8 PE=2 SV=1
Length = 664
Score = 37.7 bits (86), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 11 KGLGNERLYPEGEVD---PIPAWIQSLVITKLEQMGVVPPNYI----NSAVINDYQPGGC 63
K G E Y VD P+P + + + LE++ + YI + IN Y+PG
Sbjct: 177 KHFGYEFHYESNTVDKDKPLPGGLPEVCSSILEKL--LKEGYIKHKPDQLTINQYEPGHG 234
Query: 64 IVSHIDPPHIFDRPIISLSLFSDSALCF 91
I +HID F+ IISLSL S + F
Sbjct: 235 IPAHIDTHSAFEDEIISLSLGSAIVMDF 262
>sp|Q6IQE9|ALKB6_DANRE Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Danio
rerio GN=alkbh6 PE=2 SV=1
Length = 234
Score = 37.7 bits (86), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 20 PEGEV-DPIPAWIQSLVITKLEQMGVVPPNYINSAVINDYQPGGCIVSHIDPPHIFDRPI 78
P+G + + +P W+ K+ +G N ++N+Y+PG I+ H D P ++ +
Sbjct: 67 PKGMLAEKLPDWLLEYT-EKISALGAFAGKTANHVLVNEYKPGEGIMPHEDGP-LYHPTV 124
Query: 79 ISLSLFSDSALCFGCKFNFKPIRVSEP----------VLYLPVQRGCVTLLRDFAANGIT 128
++++ S + L F ++P+ +EP +L L VQR + +L+D
Sbjct: 125 TTITVGSHTLLDF-----YRPVCQAEPDAPQTEESRYMLSLLVQRKSLLILQDDMYKCYL 179
Query: 129 HCVR 132
H +R
Sbjct: 180 HGIR 183
>sp|Q95K79|ALKB8_MACFA Alkylated DNA repair protein alkB homolog 8 OS=Macaca fascicularis
GN=ALKBH8 PE=2 SV=1
Length = 664
Score = 37.7 bits (86), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 11 KGLGNERLYPEGEVD---PIPAWIQSLVITKLEQMGVVPPNYI----NSAVINDYQPGGC 63
K G E Y VD P+P + + + LE+ + YI + IN Y+PG
Sbjct: 177 KHFGYEFHYENNNVDKDKPLPGGLPDICDSFLEKW--LREGYIKHKPDQMTINQYEPGQG 234
Query: 64 IVSHIDPPHIFDRPIISLSLFSDSALCF 91
I +HID F+ I+SLSL S+ + F
Sbjct: 235 IPAHIDTHSAFEDEIVSLSLGSEIVMDF 262
>sp|A1A4L5|ALKB8_BOVIN Alkylated DNA repair protein alkB homolog 8 OS=Bos taurus GN=ALKBH8
PE=2 SV=1
Length = 664
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 11 KGLGNERLYPEGEVD---PIPAWIQSLVITKLEQMGVVPPNYI----NSAVINDYQPGGC 63
K G E Y VD P+P + + + LE+ + +I + IN Y+PG
Sbjct: 177 KHFGYEFHYENNNVDKDKPLPGGLPDICESILEKW--LKEGFIKHKPDQLTINQYEPGHG 234
Query: 64 IVSHIDPPHIFDRPIISLSLFSDSALCF 91
I +HID F+ IISLSL S+ + F
Sbjct: 235 IPAHIDTHSAFEDEIISLSLGSEIVMDF 262
>sp|Q3KRA9|ALKB6_HUMAN Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Homo
sapiens GN=ALKBH6 PE=1 SV=2
Length = 238
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 19 YPEGEV-DPIPAWIQSLV--ITKLEQMGVVPPNYINSAVINDYQPGGCIVSHIDPPHIFD 75
+P G V + +P W+Q V ++ L G +P N++ ++N Y PG I+ H D P +
Sbjct: 66 HPRGMVPERLPPWLQRYVDKVSNLSLFGGLPANHV---LVNQYLPGEGIMPHEDGPLYY- 121
Query: 76 RPIIS-LSLFSDSALCF 91
P +S +SL S + L F
Sbjct: 122 -PTVSTISLGSHTVLDF 137
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.137 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,086,610
Number of Sequences: 539616
Number of extensions: 3875132
Number of successful extensions: 55275
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 16060
Number of HSP's gapped (non-prelim): 24265
length of query: 227
length of database: 191,569,459
effective HSP length: 113
effective length of query: 114
effective length of database: 130,592,851
effective search space: 14887585014
effective search space used: 14887585014
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)