Query psy11248
Match_columns 227
No_of_seqs 125 out of 1144
Neff 5.3
Searched_HMMs 29240
Date Fri Aug 16 21:56:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11248.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11248hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tht_A Alkylated DNA repair pr 100.0 1.3E-31 4.6E-36 246.0 13.2 135 24-177 173-332 (345)
2 3i3q_A Alpha-ketoglutarate-dep 100.0 3.9E-30 1.3E-34 222.0 13.9 122 21-150 76-204 (211)
3 3s57_A Alpha-ketoglutarate-dep 100.0 2.8E-28 9.5E-33 208.7 10.6 116 24-149 77-203 (204)
4 2iuw_A Alkylated repair protei 99.9 5.4E-28 1.8E-32 211.2 10.8 119 24-152 103-233 (238)
5 2jig_A Prolyl-4 hydroxylase; h 94.9 0.075 2.6E-06 44.6 7.5 114 29-146 77-214 (224)
6 3lfm_A Protein FTO; FAT MASS a 94.8 0.15 5.1E-06 48.4 9.8 95 50-148 189-314 (495)
7 2rg4_A Uncharacterized protein 93.6 0.19 6.4E-06 42.5 7.3 88 50-147 102-205 (216)
8 3itq_A Prolyl 4-hydroxylase, a 93.2 0.13 4.4E-06 43.8 5.7 110 28-146 89-209 (216)
9 2opw_A Phyhd1 protein; double- 93.0 0.31 1.1E-05 41.6 8.0 98 50-151 137-268 (291)
10 3dkq_A PKHD-type hydroxylase S 92.2 0.1 3.5E-06 45.3 3.8 88 51-146 99-192 (243)
11 2a1x_A Phytanoyl-COA dioxygena 91.0 1.4 4.9E-05 37.9 9.8 43 105-151 214-256 (308)
12 2fct_A Syringomycin biosynthes 90.4 3.1 0.00011 35.7 11.5 42 106-151 219-262 (313)
13 1odm_A Isopenicillin N synthas 85.8 0.83 2.8E-05 40.6 4.8 80 55-148 186-287 (331)
14 2hbt_A EGL nine homolog 1; pro 84.9 2.5 8.4E-05 36.2 7.3 90 52-147 118-211 (247)
15 1dcs_A Deacetoxycephalosporin 84.8 0.8 2.7E-05 40.4 4.2 87 51-148 157-266 (311)
16 2rdq_A 1-deoxypentalenic acid 84.8 5.1 0.00017 33.8 9.2 85 62-151 135-254 (288)
17 1w9y_A 1-aminocyclopropane-1-c 84.7 1.4 4.8E-05 39.1 5.8 83 52-148 156-252 (319)
18 1gp6_A Leucoanthocyanidin diox 83.9 1.4 4.7E-05 39.7 5.4 83 52-148 211-306 (356)
19 3gja_A CYTC3; halogenase, beta 81.1 5.5 0.00019 35.0 8.2 42 106-151 221-264 (319)
20 3kt7_A PKHD-type hydroxylase T 78.9 9.5 0.00032 37.5 9.6 96 52-151 125-230 (633)
21 3oox_A Putative 2OG-Fe(II) oxy 77.6 1.9 6.7E-05 37.8 4.1 84 51-147 169-269 (312)
22 3on7_A Oxidoreductase, iron/as 77.0 2.4 8.4E-05 36.7 4.5 85 51-148 150-253 (280)
23 3emr_A ECTD; double stranded b 54.4 8.6 0.00029 33.6 3.3 43 106-152 229-271 (310)
24 4diq_A Lysine-specific demethy 50.8 39 0.0013 32.1 7.5 40 104-148 225-264 (489)
25 3rcq_A Aspartyl/asparaginyl be 31.2 1.1E+02 0.0037 25.4 6.4 83 50-151 101-185 (197)
26 2xdv_A MYC-induced nuclear ant 29.7 1.1E+02 0.0036 28.4 6.7 40 104-147 196-235 (442)
27 2oa2_A BH2720 protein; 1017534 20.7 2.6E+02 0.009 20.7 7.1 65 53-133 45-110 (148)
28 1yhf_A Hypothetical protein SP 20.2 1.9E+02 0.0066 19.9 5.3 53 54-124 43-95 (115)
No 1
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=99.97 E-value=1.3e-31 Score=245.96 Aligned_cols=135 Identities=24% Similarity=0.319 Sum_probs=117.6
Q ss_pred CCCCcHHHHHHHHHHHHHcCcCCCCCCcEEEEeeeCCCCCcCCCCCCCCCCCCCeEEEecCCCcccccCeeEeeecCCCC
Q psy11248 24 VDPIPAWIQSLVITKLEQMGVVPPNYINSAVINDYQPGGCIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKPIRVS 103 (227)
Q Consensus 24 ~~piP~~L~~l~i~rl~~~~~~~~~~pn~~lVN~Y~~G~~I~pH~D~~~~fg~~IvsvSL~s~~~Lg~g~~m~F~~~~~~ 103 (227)
+.+||+||..|+ +|+.+.++++.. ||+|+||+|.+|++|+||+|+++.|+++|++|| ||..++|.|++.+
T Consensus 173 p~~~P~~L~~l~-~r~~~~~~~~~~-~n~~lvN~Y~~G~~I~~H~D~~~~~~~~I~slS------LG~~~~f~f~~~~-- 242 (345)
T 3tht_A 173 SGGLPDICESFL-EKWLRKGYIKHK-PDQMTINQYEPGQGIPAHIDTHSAFEDEIVSLS------LGSEIVMDFKHPD-- 242 (345)
T ss_dssp --CCCHHHHHHH-HHHHHHTSCSSC-CSEEEEEEECTTCCEEEECCCTTTBCSCEEEEE------ESSCEEEEEECTT--
T ss_pred CcCcCHHHHHHH-HHHHhcccCCCC-CCEEEEEEecCCCCEeeccCCchhcCCeEEEEE------CCCceeEEEccCC--
Confidence 357999999998 998777776654 999999999999999999999889999999999 7888889998743
Q ss_pred CCeEEEEecCCcEEEeccccccccccCCcCCC-------------------------CCCCeEEEEEeeecCCCCCCCCC
Q psy11248 104 EPVLYLPVQRGCVTLLRDFAANGITHCVRPQD-------------------------TQYRRAVILLRRVLPHAPRLTLS 158 (227)
Q Consensus 104 ~~~~~v~L~~GSLLVM~G~ar~~w~H~Ip~~~-------------------------~~~~RISLTFR~v~p~~~~~~~~ 158 (227)
...++|.|++||||||.|++|+.|+|+|+++. .+++|||||||++++
T Consensus 243 ~~~~~l~L~~gsLlvM~G~~r~~w~H~I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~-------- 314 (345)
T 3tht_A 243 GIAVPVMLPRRSLLVMTGESRYLWTHGITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQ-------- 314 (345)
T ss_dssp SCEEEEEECTTEEEEECTHHHHTSEEEECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCS--------
T ss_pred CceEEEEcCCCcEEEEChHHhhceEccCCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCC--------
Confidence 34789999999999999999999999999981 167899999999974
Q ss_pred CCCCCccccchhhhhhhcc
Q psy11248 159 QTPRVKPYHSLYDVQARES 177 (227)
Q Consensus 159 ~~p~~~~~~~~~d~~~~~~ 177 (227)
.||.|.+.++||+|.+++
T Consensus 315 -~~c~C~~~~~cd~~~~~~ 332 (345)
T 3tht_A 315 -TPCNCSYPLVCDSQRKEN 332 (345)
T ss_dssp -SCCCCSCTTTCTTTTTTC
T ss_pred -CCcCCCCCCcccCCCccC
Confidence 379999999999997663
No 2
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=99.97 E-value=3.9e-30 Score=222.02 Aligned_cols=122 Identities=20% Similarity=0.297 Sum_probs=103.5
Q ss_pred CCCCCCCcHHHHHHHHHHHHHcCcCCCCCCcEEEEeeeCCCCCcCCCCC-CCCCCCCCeEEEecCCCcccccCeeEeeec
Q psy11248 21 EGEVDPIPAWIQSLVITKLEQMGVVPPNYINSAVINDYQPGGCIVSHID-PPHIFDRPIISLSLFSDSALCFGCKFNFKP 99 (227)
Q Consensus 21 ~~~~~piP~~L~~l~i~rl~~~~~~~~~~pn~~lVN~Y~~G~~I~pH~D-~~~~fg~~IvsvSL~s~~~Lg~g~~m~F~~ 99 (227)
...++|||+||..++ +++.+...++...||+||||+|.+|++|+||+| ++..|+++|++|| ||..++|.|++
T Consensus 76 ~~pw~~~P~~L~~l~-~~~~~~~g~~~~~pn~~LvN~Y~~G~~i~~H~D~~e~~~~~pI~svS------LG~~~~f~f~~ 148 (211)
T 3i3q_A 76 NKPWPAMPQSFHNLC-QRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVS------LGLPAIFQFGG 148 (211)
T ss_dssp SSBCCCCCHHHHHHH-HHHHHHTTCTTCCCCEEEEEEECTTCCEEEECCCCCSCTTSCEEEEE------EESCEEEEECC
T ss_pred CCCCCchHHHHHHHH-HHHHHhcCCCCcCCCEEEEEEEcCCCCcccccCCCccccCCCEEEEE------CCCCeEEEEec
Confidence 355889999999998 887654333333489999999999999999999 6778999999999 88888899987
Q ss_pred CCCCCCeEEEEecCCcEEEeccccccccccCCcCCCC------CCCeEEEEEeeecC
Q psy11248 100 IRVSEPVLYLPVQRGCVTLLRDFAANGITHCVRPQDT------QYRRAVILLRRVLP 150 (227)
Q Consensus 100 ~~~~~~~~~v~L~~GSLLVM~G~ar~~w~H~Ip~~~~------~~~RISLTFR~v~p 150 (227)
.......++|.|++||||||.|++|+ |+|+|++... ++.|||||||++.+
T Consensus 149 ~~~~~~~~~i~L~~GsllvM~G~~r~-~~H~I~~~~~~~~p~~~~~RIsLTFR~~~~ 204 (211)
T 3i3q_A 149 LKRNDPLKRLLLEHGDVVVWGGESRL-FYHGIQPLKAGFHPLTIDCRYNLTFRQAGK 204 (211)
T ss_dssp SSTTSCCEEEEECTTCEEEECGGGTT-CCEEECCCCCCCBTTTBTCEEEEEEECCSC
T ss_pred ccCCCceEEEECCCCCEEEECchHHc-eEeccCcccCCcCCCCCCCEEEEEeeeccC
Confidence 55556679999999999999999997 9999999842 35799999999974
No 3
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=99.95 E-value=2.8e-28 Score=208.73 Aligned_cols=116 Identities=21% Similarity=0.308 Sum_probs=98.0
Q ss_pred CCCCcHHHHHHHHHHHHHcCcCCCCCCcEEEEeeeCCCC-CcCCCCCCCCC--CCCCeEEEecCCCcccccCeeEeeecC
Q psy11248 24 VDPIPAWIQSLVITKLEQMGVVPPNYINSAVINDYQPGG-CIVSHIDPPHI--FDRPIISLSLFSDSALCFGCKFNFKPI 100 (227)
Q Consensus 24 ~~piP~~L~~l~i~rl~~~~~~~~~~pn~~lVN~Y~~G~-~I~pH~D~~~~--fg~~IvsvSL~s~~~Lg~g~~m~F~~~ 100 (227)
..|||++|..+. +++.+ +++.. ||+|+||+|.+|+ +|+||+|++.. ++++|++|| ||..++|.|++.
T Consensus 77 ~~pwp~~L~~l~-~~~~~--~~g~~-~n~~LvN~Y~~G~d~i~~H~D~~~~~~~~~~IasvS------LG~~~~f~~~~~ 146 (204)
T 3s57_A 77 PKPWIPVLERIR-DHVSG--VTGQT-FNFVLINRYKDGSDHICEHRDDERELAPGSPIASVS------FGASRDFVFRHK 146 (204)
T ss_dssp CEECCHHHHHHH-HHHHH--HHCCC-CSEEEEEEESSTTCCEEEECCCCTTBCTTCCEEEEE------EESCEEEEEEEG
T ss_pred CCCCCHHHHHHH-HHHHH--HhCCC-CceeEEEEECCCCCcccceecChhhccCCCcEEEEE------CCCceEEEEEEc
Confidence 457999999998 77754 23344 9999999999998 99999998776 578999999 888888999863
Q ss_pred CC-------CCCeEEEEecCCcEEEeccccccccccCCcCCC-CCCCeEEEEEeeec
Q psy11248 101 RV-------SEPVLYLPVQRGCVTLLRDFAANGITHCVRPQD-TQYRRAVILLRRVL 149 (227)
Q Consensus 101 ~~-------~~~~~~v~L~~GSLLVM~G~ar~~w~H~Ip~~~-~~~~RISLTFR~v~ 149 (227)
.. ....++|.|++||||||.|++|+.|+|+||++. ..+.|||||||++.
T Consensus 147 ~~~~~~~~~~~~~~~~~L~~GsllvM~g~~q~~w~H~Ip~~~~~~~~RislTFR~i~ 203 (204)
T 3s57_A 147 DSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRKIL 203 (204)
T ss_dssp GGCSSSCSCCCCCEEEEECTTEEEEEETTHHHHEEEEECCCTTCCSCEEEEEEECBC
T ss_pred CCCccccccCCceEEEECCCCCEEEECchhhheeEeeccccCCCCCCEEEEEeeeec
Confidence 21 235689999999999999999999999999983 56899999999974
No 4
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=99.95 E-value=5.4e-28 Score=211.16 Aligned_cols=119 Identities=18% Similarity=0.225 Sum_probs=99.9
Q ss_pred CCCCcHHHHHHHHHHHHHcCcCCCCCCcEEEEeeeCCCC-CcCCCCCCCCCCC--CCeEEEecCCCcccccCeeEeeecC
Q psy11248 24 VDPIPAWIQSLVITKLEQMGVVPPNYINSAVINDYQPGG-CIVSHIDPPHIFD--RPIISLSLFSDSALCFGCKFNFKPI 100 (227)
Q Consensus 24 ~~piP~~L~~l~i~rl~~~~~~~~~~pn~~lVN~Y~~G~-~I~pH~D~~~~fg--~~IvsvSL~s~~~Lg~g~~m~F~~~ 100 (227)
.++||++|..|. +++.+. .+.. ||+||||+|.+|+ +|+||+|++..|+ ++|++|| ||..|+|.|++.
T Consensus 103 ~p~wp~~l~~l~-~~~~~~--~g~~-~n~~LvN~Y~~G~d~i~~H~D~~~~~~~~~~IaslS------LG~~~~f~f~~~ 172 (238)
T 2iuw_A 103 NPHWHPVLRTLK-NRIEEN--TGHT-FNSLLCNLYRNEKDSVDWHSDDEPSLGRCPIIASLS------FGATRTFEMRKK 172 (238)
T ss_dssp BSSCCHHHHHHH-HHHHHH--HSCC-CCEEEEEEECSTTCCEEEECCCCGGGCSSCCEEEEE------EESCEEEEEEEC
T ss_pred CCCCCHHHHHHH-HHHHHH--hCCC-CCEEEEEEECCCCCceeCCcCChhhcCCCCcEEEEE------CCCCEEEEEecc
Confidence 358999999887 776543 2333 9999999999997 9999999988898 8999999 788888999764
Q ss_pred CCC--------CCeEEEEecCCcEEEeccccccccccCCcCC-CCCCCeEEEEEeeecCCC
Q psy11248 101 RVS--------EPVLYLPVQRGCVTLLRDFAANGITHCVRPQ-DTQYRRAVILLRRVLPHA 152 (227)
Q Consensus 101 ~~~--------~~~~~v~L~~GSLLVM~G~ar~~w~H~Ip~~-~~~~~RISLTFR~v~p~~ 152 (227)
... ...++|.|++||||||.|++|+.|+|+|+++ ..++.|||||||++.+++
T Consensus 173 ~~~~~~~~~~~~~~~~i~L~~gsllvM~G~~r~~w~H~I~~~~~~~~~RIsLTfR~v~~~~ 233 (238)
T 2iuw_A 173 PPPEENGDYTYVERVKIPLDHGTLLIMEGATQADWQHRVPKEYHSREPRVNLTFRTVYPDP 233 (238)
T ss_dssp CC--------CCCEEEEEECTTCEEEEEETHHHHEEEEECCCSSCCCCEEEEEEECCCC--
T ss_pred CCccccCcccCCceEEEEcCCCCEEEEChhhhCccEecCCCcCCCCCCEEEEEeeeccccc
Confidence 321 4679999999999999999999999999997 457899999999998654
No 5
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=94.86 E-value=0.075 Score=44.55 Aligned_cols=114 Identities=11% Similarity=0.059 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHcCcCCCCCCcEEEEeeeCCCCCcCCCCCCCC--------CCCCCeEEE-ecCCCcccccCeeEeeec
Q psy11248 29 AWIQSLVITKLEQMGVVPPNYINSAVINDYQPGGCIVSHIDPPH--------IFDRPIISL-SLFSDSALCFGCKFNFKP 99 (227)
Q Consensus 29 ~~L~~l~i~rl~~~~~~~~~~pn~~lVN~Y~~G~~I~pH~D~~~--------~fg~~Ivsv-SL~s~~~Lg~g~~m~F~~ 99 (227)
+.+..|. +|+.+...++....+.+.|..|.+|+.-.+|.|... .-+..++|+ -.++|..-|-. ..|-.
T Consensus 77 ~~~~~i~-~ri~~~~gl~~~~~e~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGe--T~Fp~ 153 (224)
T 2jig_A 77 SVISKIE-KRVAQVTMIPLENHEGLQVLHYHDGQKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGE--TVLPN 153 (224)
T ss_dssp HHHHHHH-HHHHHHHTCCGGGBCCCEEEEEETTCCEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECC--EEETT
T ss_pred HHHHHHH-HHHHHHhCCCcccccceEEEecCCCccccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCc--eeCCC
Confidence 3455555 776554334423255688899999999999999532 124567666 34666544433 33421
Q ss_pred CCC----------CCCeEEEEecCCcEEEec-----cccccccccCCcCCCCCCCeEEEEEe
Q psy11248 100 IRV----------SEPVLYLPVQRGCVTLLR-----DFAANGITHCVRPQDTQYRRAVILLR 146 (227)
Q Consensus 100 ~~~----------~~~~~~v~L~~GSLLVM~-----G~ar~~w~H~Ip~~~~~~~RISLTFR 146 (227)
... ....+.|..+.|++|++. |..-..-.|++.+. ..|.|+++|..
T Consensus 154 ~~~~~~~~~~~~c~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV-~~G~K~~~~~W 214 (224)
T 2jig_A 154 AEQKVTGDGWSECAKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPT-LKGDKWSATKW 214 (224)
T ss_dssp SSSCCCSTTSCTTGGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCE-EESEEEEEEEE
T ss_pred cccccccccccccccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCcc-ccceEEEEEEe
Confidence 100 012478999999999985 34444567999996 35788888764
No 6
>3lfm_A Protein FTO; FAT MASS and obesity associated (FTO) protein, Fe2+/2-oxoGlu (2-OG)-dependent oxidative DNA/RNA demethylases, oxidoreduc; HET: 3DT OGA; 2.50A {Homo sapiens}
Probab=94.75 E-value=0.15 Score=48.41 Aligned_cols=95 Identities=19% Similarity=0.282 Sum_probs=69.2
Q ss_pred CcEEEEeeeCCCCCcCCCCCCCCCCCCCeEEEecCCCcccccCee---Eeee---c------------------------
Q psy11248 50 INSAVINDYQPGGCIVSHIDPPHIFDRPIISLSLFSDSALCFGCK---FNFK---P------------------------ 99 (227)
Q Consensus 50 pn~~lVN~Y~~G~~I~pH~D~~~~fg~~IvsvSL~s~~~Lg~g~~---m~F~---~------------------------ 99 (227)
+|-.|||+.+|-+ | +....++.||-.-++||-.+|.-|--... ..+. |
T Consensus 189 fNvTLlN~Mdp~~-m-~~LKeEpyfgMGKmaVsWHhDenL~~~StVAVY~~sc~~~~~~~~~~~~~~~~d~~~W~Vglki 266 (495)
T 3lfm_A 189 YNVTLLNFMDPQK-M-PYLKEEPYFGMGKMAVSWHHDENLVDRSAVAVYSYSCEGPEEESEDDSHLEGRDPDIWHVGFKI 266 (495)
T ss_dssp CCEEEEEEECSSC-S-SSCCBCSSSCCCBEEEEEECCCSBCTTCCEEEEEEECCC-------------CCTTSEEEEEEE
T ss_pred eehhhhhccCccc-c-cccccccccCCcceeeeeccccccccCcceEEEEeecCCccccccccccCCCCCccceeEeeee
Confidence 8999999999975 3 34455677777777777666665544321 1111 0
Q ss_pred -CCCCCCeEEEEecCCcEEEeccccccccccCCcCCCCCCCeEEEEEeee
Q psy11248 100 -IRVSEPVLYLPVQRGCVTLLRDFAANGITHCVRPQDTQYRRAVILLRRV 148 (227)
Q Consensus 100 -~~~~~~~~~v~L~~GSLLVM~G~ar~~w~H~Ip~~~~~~~RISLTFR~v 148 (227)
-+..-+.+.|+|+.||.+.|-++--..++|+|-.- ...|+|=|.|..
T Consensus 267 awDi~tP~L~vpL~sgd~Y~Mldd~N~~HqH~VlaG--~~~RfSSTHRVA 314 (495)
T 3lfm_A 267 SWDIETPGLAIPLHQGDCYFMLDDLNATHQHCVLAG--SQPRFSSTHRVA 314 (495)
T ss_dssp TTCCSSCEEEEEECTTCEEEECTTHHHHEEEEEECC--SSCEEEEEEECB
T ss_pred cccCCCCceeeecCCCCeeeecchhhhhhhhhhhcC--CCccccccceee
Confidence 01124578999999999999999999999999995 569999999965
No 7
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=93.58 E-value=0.19 Score=42.46 Aligned_cols=88 Identities=17% Similarity=0.200 Sum_probs=57.2
Q ss_pred CcEEEEeeeCCCCCcCCCCCCCCCCCCCeEEEecCCCcccccCeeEeee-cCC------------C---CCCeEEEEecC
Q psy11248 50 INSAVINDYQPGGCIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFK-PIR------------V---SEPVLYLPVQR 113 (227)
Q Consensus 50 pn~~lVN~Y~~G~~I~pH~D~~~~fg~~IvsvSL~s~~~Lg~g~~m~F~-~~~------------~---~~~~~~v~L~~ 113 (227)
+..+=+|.|++|+...+|.|....+ -.|+-|..-. + +..+.|. +.. . ......+.-..
T Consensus 102 i~~~W~~~~~~G~~~~~H~H~~~~l-SgV~Yl~~p~----~-~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~ 175 (216)
T 2rg4_A 102 LEDIWINILPEGGVHGSHIHPHSVI-SGTTYVAMPE----G-TSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKV 175 (216)
T ss_dssp EEEEEEEEECTTCCEEEECCTTCSE-EEEEEEECCS----C-SCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCT
T ss_pred EeeEEEEEcCCCCcccCccCCCCeE-EEEEEEECCC----C-CccEEEeCCccccccccCcccccCcccCCCeeEecCCC
Confidence 5678999999999999999943222 2344444111 1 2235553 210 0 12335778899
Q ss_pred CcEEEeccccccccccCCcCCCCCCCeEEEEEee
Q psy11248 114 GCVTLLRDFAANGITHCVRPQDTQYRRAVILLRR 147 (227)
Q Consensus 114 GSLLVM~G~ar~~w~H~Ip~~~~~~~RISLTFR~ 147 (227)
|+|+|+-.. ..|+|.+....+.||||+|=-
T Consensus 176 G~lvlFpS~----l~H~V~p~~~~~~RiSIsFN~ 205 (216)
T 2rg4_A 176 GDVLLWESW----LRHEVPMNMAEEDRISVSFNY 205 (216)
T ss_dssp TEEEEEETT----SCEEECCCCSSSCEEEEEEEE
T ss_pred CeEEEECCC----CEEeccCCCCCCCEEEEEEEe
Confidence 999999443 359999975567999999943
No 8
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=93.20 E-value=0.13 Score=43.80 Aligned_cols=110 Identities=15% Similarity=0.072 Sum_probs=69.1
Q ss_pred cHHHHHHHHHHHHHcCcCCCCCCcEEEEeeeCCCCCcCCCCCCCCC-----CCCCeEEEe-cCCCcccccCeeEeeecCC
Q psy11248 28 PAWIQSLVITKLEQMGVVPPNYINSAVINDYQPGGCIVSHIDPPHI-----FDRPIISLS-LFSDSALCFGCKFNFKPIR 101 (227)
Q Consensus 28 P~~L~~l~i~rl~~~~~~~~~~pn~~lVN~Y~~G~~I~pH~D~~~~-----fg~~IvsvS-L~s~~~Lg~g~~m~F~~~~ 101 (227)
.+.+..|. +|+.+.--++....+.+.|..|.+|+.-.+|.|.... .+.+++++- .++|..-|-. ..| |
T Consensus 89 ~~~v~~i~-~Ri~~~~gl~~~~~E~lqv~~Y~~G~~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGe--T~F-p-- 162 (216)
T 3itq_A 89 NELTAKIE-KRISSIMNVPASHGEGLHILNYEVDQQYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGE--TFF-P-- 162 (216)
T ss_dssp CHHHHHHH-HHHHHHHTSCGGGBCCCEEEEECBTCCEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECC--EEE-T--
T ss_pred cHHHHHHH-HHHHHhcCceeccccceeEEEeCCCCccccccCCCcCCCcccCCceEEEEEEecccCCcCce--eEe-c--
Confidence 44455555 6765432233222466888899999999999995432 355676663 3455433322 233 2
Q ss_pred CCCCeEEEEecCCcEEEecc-----ccccccccCCcCCCCCCCeEEEEEe
Q psy11248 102 VSEPVLYLPVQRGCVTLLRD-----FAANGITHCVRPQDTQYRRAVILLR 146 (227)
Q Consensus 102 ~~~~~~~v~L~~GSLLVM~G-----~ar~~w~H~Ip~~~~~~~RISLTFR 146 (227)
...+.|....|++|++.. +......|++.+. ..|.|.++|..
T Consensus 163 --~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV-~~G~K~v~~~W 209 (216)
T 3itq_A 163 --KLNLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPV-TKGEKWIATQW 209 (216)
T ss_dssp --TTTEEECCCTTCEEEEECCCSSHHHHHTTCEEECCE-EESCEEEEEEE
T ss_pred --CCCCEEecCCCeEEEEeccCCCCCCCCcccccccee-ccccEEEEEee
Confidence 123778899999999974 2223457999986 35788888864
No 9
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=93.05 E-value=0.31 Score=41.62 Aligned_cols=98 Identities=16% Similarity=0.221 Sum_probs=60.8
Q ss_pred CcEEEEeeeCCCC--CcCCCCCCCCCCC-C--CeEEE-ecCCCcccccCeeEeee--cC------------C--------
Q psy11248 50 INSAVINDYQPGG--CIVSHIDPPHIFD-R--PIISL-SLFSDSALCFGCKFNFK--PI------------R-------- 101 (227)
Q Consensus 50 pn~~lVN~Y~~G~--~I~pH~D~~~~fg-~--~Ivsv-SL~s~~~Lg~g~~m~F~--~~------------~-------- 101 (227)
+-+..++.-.||. ..+||.|...... + ..+++ -.+.|+....||..... +. +
T Consensus 137 ~~~~~~~~k~Pg~~~~~~wHqD~~~~~~~p~~~~~~~wi~L~d~~~~nG~l~~vPGSH~~~~~~~~~~~~~~~~~~~~~~ 216 (291)
T 2opw_A 137 VVQSMYIFKQPHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVSRRMVRAPVGSAPGTSFL 216 (291)
T ss_dssp EEEEEEECCCTTTBCCEEEECGGGTSCEESSSCEEEEEEESSCBCTTTTCEEEETTCSSSCCSEEEEECC----CCEEEE
T ss_pred chheeEEecCCCCCCCcCCeeCCcccccCCCCceEEEEEEcccCCCCCCCEEEECCccCCCcccccccCCCCCCCcceee
Confidence 3344555445764 4899999542221 1 23443 23677776666643221 00 0
Q ss_pred ------CCCCeEEEEecCCcEEEeccccccccccCCcCCCCCCCeEEEEEeeecCC
Q psy11248 102 ------VSEPVLYLPVQRGCVTLLRDFAANGITHCVRPQDTQYRRAVILLRRVLPH 151 (227)
Q Consensus 102 ------~~~~~~~v~L~~GSLLVM~G~ar~~w~H~Ip~~~~~~~RISLTFR~v~p~ 151 (227)
.....+.+.+++||++++.+.. .|+-.+......|.++++|-+..+
T Consensus 217 ~~~~~~~~~~~v~~~~~aGd~~~f~~~~----~H~s~~N~s~~~R~~~~~~~~~~~ 268 (291)
T 2opw_A 217 GSEPARDNSLFVPTPVQRGALVLIHGEV----VHKSKQNLSDRSRQAYTFHLMEAS 268 (291)
T ss_dssp ECCCCCCGGGCEEECBCTTCEEEEETTC----EEEECCBCSSSCCCEEEEEEEECT
T ss_pred ccccCCCcCCeeecccCCCcEEEEcCCc----eecCCCCCCCCceEEEEEEEEcCC
Confidence 0113577899999999999964 388776655678999999987653
No 10
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=92.21 E-value=0.1 Score=45.29 Aligned_cols=88 Identities=20% Similarity=0.215 Sum_probs=57.0
Q ss_pred cEEEEeeeCCCCCcCCCCCCCCCC--C---CCeEEE-ecCCCcccccCeeEeeecCCCCCCeEEEEecCCcEEEeccccc
Q psy11248 51 NSAVINDYQPGGCIVSHIDPPHIF--D---RPIISL-SLFSDSALCFGCKFNFKPIRVSEPVLYLPVQRGCVTLLRDFAA 124 (227)
Q Consensus 51 n~~lVN~Y~~G~~I~pH~D~~~~f--g---~~Ivsv-SL~s~~~Lg~g~~m~F~~~~~~~~~~~v~L~~GSLLVM~G~ar 124 (227)
..+.++.|.+|+.-.+|.|....- + ..++++ -++++..--.|-.+.|... .....|..+.|+++++...
T Consensus 99 e~~~~~rY~~G~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~---~~~~~V~P~~G~~v~F~s~-- 173 (243)
T 3dkq_A 99 YPPLFNRYQGGETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDT---YGQQSIKLSAGSLVLYPSS-- 173 (243)
T ss_dssp EEEEEEEECTTCEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEET---TEEEEECCCTTCEEEEETT--
T ss_pred ccceEEEECCCCeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeC---CCcEEEecCCCEEEEECCC--
Confidence 448999999999999999964321 1 123333 3455521111223344321 1246788999999999764
Q ss_pred cccccCCcCCCCCCCeEEEEEe
Q psy11248 125 NGITHCVRPQDTQYRRAVILLR 146 (227)
Q Consensus 125 ~~w~H~Ip~~~~~~~RISLTFR 146 (227)
..|++.+. .+|.|+++|+.
T Consensus 174 --~lH~v~pV-~~G~R~~~~~W 192 (243)
T 3dkq_A 174 --SLHQVTPV-LSGERTAAFMW 192 (243)
T ss_dssp --SEEEECCE-EEECEEEEEEE
T ss_pred --CeEcCccc-cccCEEEEEEe
Confidence 46999996 36899999974
No 11
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=90.97 E-value=1.4 Score=37.90 Aligned_cols=43 Identities=16% Similarity=0.122 Sum_probs=34.7
Q ss_pred CeEEEEecCCcEEEeccccccccccCCcCCCCCCCeEEEEEeeecCC
Q psy11248 105 PVLYLPVQRGCVTLLRDFAANGITHCVRPQDTQYRRAVILLRRVLPH 151 (227)
Q Consensus 105 ~~~~v~L~~GSLLVM~G~ar~~w~H~Ip~~~~~~~RISLTFR~v~p~ 151 (227)
..+.+.+++||++++.+.. -|+-.+......|.+++++-...+
T Consensus 214 ~~v~~~~~aGd~vlf~~~~----~H~s~~N~s~~~R~~~~~~y~~~~ 256 (308)
T 2a1x_A 214 ARVHLVMEKGDTVFFHPLL----IHGSGQNKTQGFRKAISCHFASAD 256 (308)
T ss_dssp CCEEECBCTTCEEEECTTC----CEEECCBCSSSCEEEEEEEEEETT
T ss_pred CeEEccCCCccEEEECCCc----cccCCCCCCCCceEEEEEEEECCC
Confidence 4578999999999999963 388777655678999999987655
No 12
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=90.39 E-value=3.1 Score=35.74 Aligned_cols=42 Identities=17% Similarity=0.183 Sum_probs=34.2
Q ss_pred eEEEEecCCcEEEeccccccccccCCcCCC--CCCCeEEEEEeeecCC
Q psy11248 106 VLYLPVQRGCVTLLRDFAANGITHCVRPQD--TQYRRAVILLRRVLPH 151 (227)
Q Consensus 106 ~~~v~L~~GSLLVM~G~ar~~w~H~Ip~~~--~~~~RISLTFR~v~p~ 151 (227)
.+.+.+++||++++.+.. .|+-.+.. ....|.++++|-+..+
T Consensus 219 ~v~~~~~aGd~v~f~~~l----~H~s~~N~~ss~~~R~a~~~~y~~~~ 262 (313)
T 2fct_A 219 AVPMQMKAGQFIIFWSTL----MHASYPHSGESQEMRMGFASRYVPSF 262 (313)
T ss_dssp CEEECBCTTEEEEEETTS----EEEECCBCSSSSSCEEEEEEEEEETT
T ss_pred eeEeeeCCceEEEEeCCc----eeeCCCCCCCCCCceEEEEEEEECCC
Confidence 478899999999999964 48877765 5678999999987644
No 13
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=85.76 E-value=0.83 Score=40.60 Aligned_cols=80 Identities=9% Similarity=0.018 Sum_probs=53.5
Q ss_pred EeeeC------C---------CC-CcCCCCCCCCCCCCCeEEEecCCCcccccCeeEeeecCCCCCCeEEEEecCCcEEE
Q psy11248 55 INDYQ------P---------GG-CIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKPIRVSEPVLYLPVQRGCVTL 118 (227)
Q Consensus 55 VN~Y~------~---------G~-~I~pH~D~~~~fg~~IvsvSL~s~~~Lg~g~~m~F~~~~~~~~~~~v~L~~GSLLV 118 (227)
+|.|. + +. ++++|.|. .++|| |+.+.+=| ++.... .. .+.|.-.+|+++|
T Consensus 186 l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~------g~lTl-L~qd~v~G----LQV~~~--~g-Wi~V~p~pgalvV 251 (331)
T 1odm_A 186 LIRYPYLDPYPEAAIKTAADGTKLSFEWHEDV------SLITV-LYQSNVQN----LQVETA--AG-YQDIEADDTGYLI 251 (331)
T ss_dssp EEEECCCSSCCGGGCEECTTSCEEEEEEECCS------SSEEE-EEECSSCC----EEEEET--TE-EEECCCCTTSEEE
T ss_pred HhhCCCcccccccccCCCccccccccccccCC------CeEEE-EeeCCCCC----EEEEcC--CC-eEECCCCCCeEEE
Confidence 89998 5 13 79999992 35555 33333222 333321 23 7889999999999
Q ss_pred eccccccccccCCcCC------CCCCCeEEEEEeee
Q psy11248 119 LRDFAANGITHCVRPQ------DTQYRRAVILLRRV 148 (227)
Q Consensus 119 M~G~ar~~w~H~Ip~~------~~~~~RISLTFR~v 148 (227)
.-|++=..|..+.-+. .....|+||.|=-.
T Consensus 252 NiGD~l~~~TnG~~kS~~HRVv~~~~~R~Sia~F~~ 287 (331)
T 1odm_A 252 NCGSYMAHLTNNYYKAPIHRVKWVNAERQSLPFFVN 287 (331)
T ss_dssp EECHHHHHHTTTSSCCCCEEEECCCSCEEEEEEEEC
T ss_pred EccHHHHHHhCCEeeCCCceeCCCCCCEEEEEEEEc
Confidence 9999888887665443 12467999998654
No 14
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=84.91 E-value=2.5 Score=36.25 Aligned_cols=90 Identities=17% Similarity=0.141 Sum_probs=56.1
Q ss_pred EEEEeeeCC-CCCcCCCCCCCCCCCCCeEEE-ecCCCccc--ccCeeEeeecCCCCCCeEEEEecCCcEEEecccccccc
Q psy11248 52 SAVINDYQP-GGCIVSHIDPPHIFDRPIISL-SLFSDSAL--CFGCKFNFKPIRVSEPVLYLPVQRGCVTLLRDFAANGI 127 (227)
Q Consensus 52 ~~lVN~Y~~-G~~I~pH~D~~~~fg~~Ivsv-SL~s~~~L--g~g~~m~F~~~~~~~~~~~v~L~~GSLLVM~G~ar~~w 127 (227)
.+.+..|.+ |+...+|.|... -+...+++ =.+++.-- ..|-.+.|-+.. .....+|.-..|.|+++..+.+ -
T Consensus 118 e~~~~~Y~~~G~~y~~H~D~~~-~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~-~~~~~~v~P~~grlv~F~s~~~--~ 193 (247)
T 2hbt_A 118 KAMVACYPGNGTGYVRHVDNPN-GDGRCVTCIYYLNKDWDAKVSGGILRIFPEG-KAQFADIEPKFDRLLFFWSDRR--N 193 (247)
T ss_dssp CEEEEEECSSSCCEEEECSSCS-CCSEEEEEEEECBTTCCHHHHBCCEEECCTT-CSSCEEECCBTTEEEEEECSTT--C
T ss_pred eEEEEEecCCCCcccccccCCC-CCCceEEEEEEeCCCCCCCCCceeEEEecCC-CCceEEEEcCCCEEEEEecCCC--c
Confidence 367889996 999999999632 22333333 34444200 113334443322 2344677788899999986432 3
Q ss_pred ccCCcCCCCCCCeEEEEEee
Q psy11248 128 THCVRPQDTQYRRAVILLRR 147 (227)
Q Consensus 128 ~H~Ip~~~~~~~RISLTFR~ 147 (227)
.|+|.+. .+.|.|||..-
T Consensus 194 ~H~V~p~--~~~R~sit~W~ 211 (247)
T 2hbt_A 194 PHEVQPA--YATRYAITVWY 211 (247)
T ss_dssp CEEECCB--SSCEEEEEEEE
T ss_pred eeeeccC--CCEEEEEEEEE
Confidence 5999884 68999999743
No 15
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=84.80 E-value=0.8 Score=40.42 Aligned_cols=87 Identities=11% Similarity=0.028 Sum_probs=54.9
Q ss_pred cEEEEeeeCC-------C--C-CcCCCCCCCCCCCCCeEEEecCCC-cccccCeeEeeecCCCCCCeEEEEecCCcEEEe
Q psy11248 51 NSAVINDYQP-------G--G-CIVSHIDPPHIFDRPIISLSLFSD-SALCFGCKFNFKPIRVSEPVLYLPVQRGCVTLL 119 (227)
Q Consensus 51 n~~lVN~Y~~-------G--~-~I~pH~D~~~~fg~~IvsvSL~s~-~~Lg~g~~m~F~~~~~~~~~~~v~L~~GSLLVM 119 (227)
..+-+|.|.+ | . ++++|.|. .++|| |+.+ .+=| +.-++... ....+.|.-.+|+++|.
T Consensus 157 ~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~------g~lTl-L~qd~~v~G-~~~LqV~~---~g~W~~V~p~pg~lvVN 225 (311)
T 1dcs_A 157 PLLRFRYFPQVPEHRSAEEQPLRMAPHYDL------SMVTL-IQQTPCANG-FVSLQAEV---GGAFTDLPYRPDAVLVF 225 (311)
T ss_dssp CEEEEEEECC-----------CCEEEEEEC------SSEEE-EEEECCTTC-CCCEEEEE---TTEEEECCCCTTCEEEE
T ss_pred hhhheecCCCCCcccccCccccccccccCC------CeEEE-EecCCCCCC-ceeEEEEe---CCEEEeCcCCCCeEEEE
Confidence 4567899975 2 3 59999993 24555 3333 3222 11133222 34578888999999999
Q ss_pred ccccccccccCCcCC-------CC-----CCCeEEEEEeee
Q psy11248 120 RDFAANGITHCVRPQ-------DT-----QYRRAVILLRRV 148 (227)
Q Consensus 120 ~G~ar~~w~H~Ip~~-------~~-----~~~RISLTFR~v 148 (227)
-|++=..|..+.-+. .. ...|+||.|---
T Consensus 226 iGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~ 266 (311)
T 1dcs_A 226 CGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLR 266 (311)
T ss_dssp ECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEEC
T ss_pred HHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEc
Confidence 999888887664443 11 457999998643
No 16
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=84.79 E-value=5.1 Score=33.80 Aligned_cols=85 Identities=15% Similarity=0.040 Sum_probs=52.6
Q ss_pred CCcCCCCCCCCCCC--CCeEEEe-cCCCcccccCeeEeee--cCC---------------------------CCCCeEEE
Q psy11248 62 GCIVSHIDPPHIFD--RPIISLS-LFSDSALCFGCKFNFK--PIR---------------------------VSEPVLYL 109 (227)
Q Consensus 62 ~~I~pH~D~~~~fg--~~IvsvS-L~s~~~Lg~g~~m~F~--~~~---------------------------~~~~~~~v 109 (227)
...+||.|.. .+. +..+++- .+.|+....||..... +.. .....+.+
T Consensus 135 ~~~~wHqD~~-~~~~~~~~v~~wiaL~d~~~enG~l~vvPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 213 (288)
T 2rdq_A 135 YLTPFHQDGF-YIGPNQDFRTFWIPLIRTTRESGGVALADGSHRRGKRDHVLNESFRRFGHPVRGIPPTEVSEDEHLLHS 213 (288)
T ss_dssp TSCCSBCHHH-HSCSCCCCEEEEEESSCCCTTTCEEEEETTTTSSCCCCCEEEEEEEETTEEEEECCGGGSCTTSCEECC
T ss_pred CCcCcccccc-ccCCCCCeEEEEEECCCCCccCCcEEEEeCCccccccccccchhhhccCcccccCCCccccccCceeec
Confidence 3789999953 232 2344443 3777777777643221 000 01224677
Q ss_pred EecCCcEEEeccccccccccCCcCCCC---CCCeEEEEEeeecCC
Q psy11248 110 PVQRGCVTLLRDFAANGITHCVRPQDT---QYRRAVILLRRVLPH 151 (227)
Q Consensus 110 ~L~~GSLLVM~G~ar~~w~H~Ip~~~~---~~~RISLTFR~v~p~ 151 (227)
.+++||++++.+.. .|+-.+... |..|+++.+|-..++
T Consensus 214 ~~~aGdv~lf~~~~----~H~s~~N~s~~~R~~R~s~~~~~~~~~ 254 (288)
T 2rdq_A 214 PMEPGDILLFHAHM----CHKSIPNLSKDPRLMRMSMDTRVQPAK 254 (288)
T ss_dssp CCCTTCEEEEETTC----CEEEECCCCCTTCCCEEEEEEEEEETT
T ss_pred ccCCCCEEEEeCCc----eecCCCCCCCCccceEEEEEEEEecCc
Confidence 89999999999964 377666532 245799999988643
No 17
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=84.70 E-value=1.4 Score=39.08 Aligned_cols=83 Identities=17% Similarity=0.142 Sum_probs=55.7
Q ss_pred EEEEeeeCCC------CCcCCCCCCCCCCCCCeEEEecCCC-cccccCeeEeeecCCCCCCeEEEEecCCcEEEeccccc
Q psy11248 52 SAVINDYQPG------GCIVSHIDPPHIFDRPIISLSLFSD-SALCFGCKFNFKPIRVSEPVLYLPVQRGCVTLLRDFAA 124 (227)
Q Consensus 52 ~~lVN~Y~~G------~~I~pH~D~~~~fg~~IvsvSL~s~-~~Lg~g~~m~F~~~~~~~~~~~v~L~~GSLLVM~G~ar 124 (227)
.+-+|.|.+- .++++|.|. ..+|| |+.| .+=| ++... .+..+.|.-.+|+++|.-|++=
T Consensus 156 ~lrl~~YPp~~~~~~~~g~~~HtD~------g~lTl-L~qd~~v~G----LQV~~---~g~Wi~V~p~pgalvVNiGD~l 221 (319)
T 1w9y_A 156 GTKVSNYPPCPKPDLIKGLRAHTDA------GGIIL-LFQDDKVSG----LQLLK---DGQWIDVPPMRHSIVVNLGDQL 221 (319)
T ss_dssp EEEEEECCCCSCGGGGSSCCCBCCS------SSEEE-EEESSSCCC----EEEEE---TTEEEECCCCTTCEEEEECHHH
T ss_pred eeEEEecCCCcccccccccccccCC------CceEE-EEecCCCCe----eeEee---CCeEEEcccCCCcEEEEhHHHH
Confidence 4689999752 279999992 34555 3332 3322 22222 2457888889999999999998
Q ss_pred cccccCCcCC-------CCCCCeEEEEEeee
Q psy11248 125 NGITHCVRPQ-------DTQYRRAVILLRRV 148 (227)
Q Consensus 125 ~~w~H~Ip~~-------~~~~~RISLTFR~v 148 (227)
..|..+.-+. .....|+||.|---
T Consensus 222 ~~~SnG~~kS~~HRVv~~~~~~R~Sia~F~~ 252 (319)
T 1w9y_A 222 EVITNGKYKSVMHRVIAQKDGARMSLASFYN 252 (319)
T ss_dssp HHHTTTSSCCCCEEECCCSSSCCEEEEEEEE
T ss_pred HHHhCCeeecccceecCCCCCCceEEEEEec
Confidence 8887765443 22457999998653
No 18
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=83.94 E-value=1.4 Score=39.71 Aligned_cols=83 Identities=7% Similarity=0.008 Sum_probs=55.6
Q ss_pred EEEEeeeCCC-----C-CcCCCCCCCCCCCCCeEEEecCCCcccccCeeEeeecCCCCCCeEEEEecCCcEEEecccccc
Q psy11248 52 SAVINDYQPG-----G-CIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKPIRVSEPVLYLPVQRGCVTLLRDFAAN 125 (227)
Q Consensus 52 ~~lVN~Y~~G-----~-~I~pH~D~~~~fg~~IvsvSL~s~~~Lg~g~~m~F~~~~~~~~~~~v~L~~GSLLVM~G~ar~ 125 (227)
.+-+|.|.+- . ++++|.|. ..+|| |+.+.+=| +.... .+..+.|.-.+|+++|.-|++=.
T Consensus 211 ~lrl~~YPp~~~~~~~~g~~~HtD~------g~lTl-L~qd~v~G----LQV~~---~g~Wi~V~p~pgalvVNiGD~l~ 276 (356)
T 1gp6_A 211 QMKINYYPKCPQPELALGVEAHTDV------SALTF-ILHNMVPG----LQLFY---EGKWVTAKCVPDSIVMHIGDTLE 276 (356)
T ss_dssp EEEEEEECCCSSTTTCCSEEEECCC------SSEEE-EEECSCCC----EEEEE---TTEEEECCCCTTCEEEEECHHHH
T ss_pred eeeeeecCCCCCcccccCcCCccCC------CeEEE-EEEcCCCC----eEEec---CCcEEECcCCCCeEEEEeccHHH
Confidence 4578999752 2 79999992 24555 33443222 22222 34578888999999999999888
Q ss_pred ccccCCcCC-------CCCCCeEEEEEeee
Q psy11248 126 GITHCVRPQ-------DTQYRRAVILLRRV 148 (227)
Q Consensus 126 ~w~H~Ip~~-------~~~~~RISLTFR~v 148 (227)
.|..+.-+. .....|+||.|---
T Consensus 277 ~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~ 306 (356)
T 1gp6_A 277 ILSNGKYKSILHRGLVNKEKVRISWAVFCE 306 (356)
T ss_dssp HHTTTSSCCCCEEECCCSSCCEEEEEEEEE
T ss_pred HhcCCEeeccCceecCCCCCCEEEEEEeec
Confidence 887765443 12457999998654
No 19
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=81.13 E-value=5.5 Score=34.99 Aligned_cols=42 Identities=14% Similarity=0.136 Sum_probs=33.5
Q ss_pred eEEEEecCCcEEEeccccccccccCCcCCC--CCCCeEEEEEeeecCC
Q psy11248 106 VLYLPVQRGCVTLLRDFAANGITHCVRPQD--TQYRRAVILLRRVLPH 151 (227)
Q Consensus 106 ~~~v~L~~GSLLVM~G~ar~~w~H~Ip~~~--~~~~RISLTFR~v~p~ 151 (227)
.+.+.+++||++++.+.. .|+=.+.. ....|.++++|-+..+
T Consensus 221 ~v~~~~~aGd~v~f~~~~----~H~s~~N~~ts~~~R~a~~~~y~~~~ 264 (319)
T 3gja_A 221 AYPMVLKPGEAVIFWSNT----MHASLPHTGSKTDYRMGFAARYVPTQ 264 (319)
T ss_dssp CCBCCBCTTEEEEEETTS----CEEECCCCSCTTCCEEEEEEEEEETT
T ss_pred eeEeeECCCeEEEEcCCc----cccCCCCCCCCCCcEEEEEEEEECCC
Confidence 355779999999999975 38777765 6779999999988644
No 20
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=78.91 E-value=9.5 Score=37.48 Aligned_cols=96 Identities=20% Similarity=0.192 Sum_probs=58.6
Q ss_pred EEEEeeeCCCCCcCCCCCCCCCCCC-CeEEEecCCCcc--c---ccCeeEeeecCC----CCCCeEEEEecCCcEEEecc
Q psy11248 52 SAVINDYQPGGCIVSHIDPPHIFDR-PIISLSLFSDSA--L---CFGCKFNFKPIR----VSEPVLYLPVQRGCVTLLRD 121 (227)
Q Consensus 52 ~~lVN~Y~~G~~I~pH~D~~~~fg~-~IvsvSL~s~~~--L---g~g~~m~F~~~~----~~~~~~~v~L~~GSLLVM~G 121 (227)
.+.++.|.+|..+.+|.|. ++. .|..|-.+.+.. . --|....|.... ......+|.=..|.|++|.-
T Consensus 125 D~~~a~Y~~G~fL~~H~D~---~~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~~~~P~~d~~~~I~P~fNrLV~F~v 201 (633)
T 3kt7_A 125 DMSINTYTKGCHLLTHDDV---IGSRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAFFKV 201 (633)
T ss_dssp CEEEEEECTTCEEEEECCC---CTTEEEEEEEECSCTTSCCCGGGBCCEEECCEEETTEECSSCSEEECCCTTEEEEEEC
T ss_pred eEEEEEeCCCCeeeecCCC---CCCeEEEEEEEcCCCCCCCCccCCceEEEecCCCcCCCCCCceEEEecCCCeEEEEEc
Confidence 3788999999999999994 333 444443444311 1 113323333211 02234566667789999986
Q ss_pred ccccccccCCcCCCCCCCeEEEEEeeecCC
Q psy11248 122 FAANGITHCVRPQDTQYRRAVILLRRVLPH 151 (227)
Q Consensus 122 ~ar~~w~H~Ip~~~~~~~RISLTFR~v~p~ 151 (227)
.-...| |+|.+......|.|||-.-..|.
T Consensus 202 sp~~S~-H~V~eV~~~~~RlSItGWF~~p~ 230 (633)
T 3kt7_A 202 LPGFSF-HDXEEVKVDKHRLSIQGWYHIPQ 230 (633)
T ss_dssp CTTTCC-EEECCBCSSCCEEEEEEEEECCC
T ss_pred CCCCCc-CCCCccCCCCCEEEEEEEeccCC
Confidence 532355 98887644678999987655544
No 21
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=77.59 E-value=1.9 Score=37.81 Aligned_cols=84 Identities=17% Similarity=0.097 Sum_probs=54.4
Q ss_pred cEEEEeeeCCC------CCcCCCCCCCCCCCCCeEEEecCCCcccccCeeEeeecCCCCCCeEEEEecCCcEEEeccccc
Q psy11248 51 NSAVINDYQPG------GCIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKPIRVSEPVLYLPVQRGCVTLLRDFAA 124 (227)
Q Consensus 51 n~~lVN~Y~~G------~~I~pH~D~~~~fg~~IvsvSL~s~~~Lg~g~~m~F~~~~~~~~~~~v~L~~GSLLVM~G~ar 124 (227)
..+-+|.|.+- -++++|.|. ..+|| |+.+.+=| +..... ....+.|.-.+|+++|.-|++=
T Consensus 169 ~~lr~~~Ypp~~~~~~~~g~~~HtD~------g~lTl-L~qd~v~G----LqV~~~--~g~W~~V~p~pg~~vVNiGD~l 235 (312)
T 3oox_A 169 SVLRLLHYPPIPKDATGVRAGAHGDI------NTITL-LLGAEEGG----LEVLDR--DGQWLPINPPPGCLVINIGDML 235 (312)
T ss_dssp CEEEEEEECCCSSCCC--CEEEECCC------SSEEE-EECCTTSC----EEEECT--TSCEEECCCCSSCEEEEECHHH
T ss_pred ceeeeEecCCCCCCcCCcCccceecC------ceEEE-EeEcCcCc----eEEECC--CCcEEECCCCCCeEEEEhHHHH
Confidence 45788999762 278899992 34555 34443322 333221 2457888999999999999988
Q ss_pred cccccCCcCC------C-----CCCCeEEEEEee
Q psy11248 125 NGITHCVRPQ------D-----TQYRRAVILLRR 147 (227)
Q Consensus 125 ~~w~H~Ip~~------~-----~~~~RISLTFR~ 147 (227)
..|.-+.-+. . ....|+||.|--
T Consensus 236 ~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~ 269 (312)
T 3oox_A 236 ERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFL 269 (312)
T ss_dssp HHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEE
T ss_pred HHHhCCeecCCCceEeCCCccCCCCCEEEEEEEe
Confidence 8776555443 1 134599998864
No 22
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=76.96 E-value=2.4 Score=36.74 Aligned_cols=85 Identities=16% Similarity=0.118 Sum_probs=54.8
Q ss_pred cEEEEeeeCCC-------C-CcCCCCCCCCCCCCCeEEEecCCCcccccCeeEeeecCCCCCCeEEEEecCCcEEEeccc
Q psy11248 51 NSAVINDYQPG-------G-CIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKPIRVSEPVLYLPVQRGCVTLLRDF 122 (227)
Q Consensus 51 n~~lVN~Y~~G-------~-~I~pH~D~~~~fg~~IvsvSL~s~~~Lg~g~~m~F~~~~~~~~~~~v~L~~GSLLVM~G~ 122 (227)
..+-+|.|.+- . ++++|.|- ..+|+ |+.+.+=| +..... ....+.|.-.+|+++|.-|+
T Consensus 150 ~~lr~~~YP~~~~~~~~~~~g~~~HtD~------g~lTl-L~qd~~~G----LqV~~~--~g~W~~V~p~pg~~vVNiGD 216 (280)
T 3on7_A 150 TLLRILHYPPMTGDEEMGAIRAAAHEDI------NLITV-LPTANEPG----LQVKAK--DGSWLDVPSDFGNIIINIGD 216 (280)
T ss_dssp CEEEEEEECCCCTTCCCCSEEEEEECCC------SSEEE-EECCSCCC----EEEECT--TSCEEECCCCTTCEEEEECH
T ss_pred ceEEEEECCCCCCccccCcccccCCCCC------CeEEE-EEecCCCC----eEEEcC--CCCEEECcCCCCEEEEEcCh
Confidence 45679999752 3 68899992 34555 33443222 333321 34578888899999999999
Q ss_pred cccccccCCcCC------C-----CCCCeEEEEEeee
Q psy11248 123 AANGITHCVRPQ------D-----TQYRRAVILLRRV 148 (227)
Q Consensus 123 ar~~w~H~Ip~~------~-----~~~~RISLTFR~v 148 (227)
+=..|.-+.-+. . ....|+||.|---
T Consensus 217 ~l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~ 253 (280)
T 3on7_A 217 MLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLH 253 (280)
T ss_dssp HHHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEEC
T ss_pred HHHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEc
Confidence 888887555443 1 1347999988643
No 23
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=54.40 E-value=8.6 Score=33.64 Aligned_cols=43 Identities=19% Similarity=0.166 Sum_probs=33.0
Q ss_pred eEEEEecCCcEEEeccccccccccCCcCCCCCCCeEEEEEeeecCCC
Q psy11248 106 VLYLPVQRGCVTLLRDFAANGITHCVRPQDTQYRRAVILLRRVLPHA 152 (227)
Q Consensus 106 ~~~v~L~~GSLLVM~G~ar~~w~H~Ip~~~~~~~RISLTFR~v~p~~ 152 (227)
.+.+.+++||++++.+.. .|+-.+......|.+|+++-...+.
T Consensus 229 ~v~~~~~aGdvl~f~~~~----~H~s~~N~S~~~R~~l~~~y~~~~~ 271 (310)
T 3emr_A 229 ISVPTGKAGSVTLFESNT----MHGSTSNITPYPRNNLFMVYNSVKN 271 (310)
T ss_dssp CBCCCBSTTCEEEEETTC----CEEECCCCSSCCCCEEEEEEEEGGG
T ss_pred eEEeeeCCceEEEEeCCc----eecCCCCCCCCCeEEEEEEEeCCcc
Confidence 466779999999999964 3777666556789999998775443
No 24
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=50.84 E-value=39 Score=32.07 Aligned_cols=40 Identities=25% Similarity=0.298 Sum_probs=28.7
Q ss_pred CCeEEEEecCCcEEEeccccccccccCCcCCCCCCCeEEEEEeee
Q psy11248 104 EPVLYLPVQRGCVTLLRDFAANGITHCVRPQDTQYRRAVILLRRV 148 (227)
Q Consensus 104 ~~~~~v~L~~GSLLVM~G~ar~~w~H~Ip~~~~~~~RISLTFR~v 148 (227)
.+.+.+.|.+|++|.|=- .|-|.+.... .+.-++|||--.
T Consensus 225 ~p~~e~~L~pGDvLYiP~----g~~H~~~s~~-~~~SlhlTi~~~ 264 (489)
T 4diq_A 225 EPVLQTVLEPGDLLYFPR----GFIHQAECQD-GVHSLHLTLSTY 264 (489)
T ss_dssp CCSEEEEECTTCEEEECT----TCEEEEEBCS-SCCEEEEEEEEC
T ss_pred CcceEEEECCCCEEEECC----CCceEEEecC-CCceEEEeeccc
Confidence 456889999999999864 3567776642 256788888653
No 25
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=31.22 E-value=1.1e+02 Score=25.37 Aligned_cols=83 Identities=18% Similarity=0.229 Sum_probs=54.2
Q ss_pred CcEEEEeeeCCCCCcCCCCCCCCCCCCCeEEEe--cCCCcccccCeeEeeecCCCCCCeEEEEecCCcEEEecccccccc
Q psy11248 50 INSAVINDYQPGGCIVSHIDPPHIFDRPIISLS--LFSDSALCFGCKFNFKPIRVSEPVLYLPVQRGCVTLLRDFAANGI 127 (227)
Q Consensus 50 pn~~lVN~Y~~G~~I~pH~D~~~~fg~~IvsvS--L~s~~~Lg~g~~m~F~~~~~~~~~~~v~L~~GSLLVM~G~ar~~w 127 (227)
.-++.+..-.||..|.||.|.. ...+.+= |..+. -+|.|... -.....+.|.++|+... +
T Consensus 101 ~~~a~fs~L~pG~~I~pH~g~~----n~~lR~HL~L~~p~---~~~~i~V~-------~~~~~w~eGe~~~fDds----~ 162 (197)
T 3rcq_A 101 RGQIKYSIMHPGTHVWPHTGPT----NCRLRMHLGLVIPK---EGCKIRCA-------NETKTWEEGKVLIFDDS----F 162 (197)
T ss_dssp TCEEEEEEECTTEEEEEECCSC----TTEEEEEEEEECCS---SSEEEEET-------TEEECCCBTCEEEECTT----S
T ss_pred cceEEEEEeCCCCCcCCeeCCC----CCeEEEEEEEEeCC---CCcEEEEC-------CEEEEeeCCcEEEEcCC----e
Confidence 3478899999999999999943 2233332 11111 13434321 13556889999999863 3
Q ss_pred ccCCcCCCCCCCeEEEEEeeecCC
Q psy11248 128 THCVRPQDTQYRRAVILLRRVLPH 151 (227)
Q Consensus 128 ~H~Ip~~~~~~~RISLTFR~v~p~ 151 (227)
.|.+-.. ..+.||.|.+--.+|+
T Consensus 163 ~Hev~N~-~d~~RvvL~~D~~rPd 185 (197)
T 3rcq_A 163 EHEVWQD-ASSFRLIFIVDVWHPE 185 (197)
T ss_dssp CEEEEEC-SSSCEEEEEEEEECTT
T ss_pred EEEEEEC-CCCCEEEEEEeeeCCC
Confidence 5766654 4678999999888766
No 26
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=29.72 E-value=1.1e+02 Score=28.40 Aligned_cols=40 Identities=13% Similarity=0.175 Sum_probs=26.7
Q ss_pred CCeEEEEecCCcEEEeccccccccccCCcCCCCCCCeEEEEEee
Q psy11248 104 EPVLYLPVQRGCVTLLRDFAANGITHCVRPQDTQYRRAVILLRR 147 (227)
Q Consensus 104 ~~~~~v~L~~GSLLVM~G~ar~~w~H~Ip~~~~~~~RISLTFR~ 147 (227)
.+...+.|.+|++|.|= ..|-|.+........-+.|||..
T Consensus 196 ~~~~~~~L~pGD~LYiP----~g~~H~~~s~~~~~~SlhlT~~~ 235 (442)
T 2xdv_A 196 RPVHEFMLKPGDLLYFP----RGTIHQADTPAGLAHSTHVTIST 235 (442)
T ss_dssp SCSEEEEECTTCEEEEC----TTCEEEEECCSSSCCEEEEEEEE
T ss_pred CcceEEEECCCcEEEEC----CCceEEEEecCCCcceeeccccc
Confidence 34578999999999885 34557766542123457777775
No 27
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=20.72 E-value=2.6e+02 Score=20.68 Aligned_cols=65 Identities=20% Similarity=0.116 Sum_probs=37.1
Q ss_pred EEEeeeCCCCCcCCCCCCCCCCCCCeEEEecCCCcccccCe-eEeeecCCCCCCeEEEEecCCcEEEeccccccccccCC
Q psy11248 53 AVINDYQPGGCIVSHIDPPHIFDRPIISLSLFSDSALCFGC-KFNFKPIRVSEPVLYLPVQRGCVTLLRDFAANGITHCV 131 (227)
Q Consensus 53 ~lVN~Y~~G~~I~pH~D~~~~fg~~IvsvSL~s~~~Lg~g~-~m~F~~~~~~~~~~~v~L~~GSLLVM~G~ar~~w~H~I 131 (227)
+.+-...+|..+++|.-. ...+-++.++ |. .+.+.. +.....+.+.|.+|+++++..... |.+
T Consensus 45 ~~~~~l~pg~~~~~H~H~--~~~E~~~Vl~---------G~~~~~i~~-~~~~~~~~~~l~~Gd~i~ip~g~~----H~~ 108 (148)
T 2oa2_A 45 VTLMSIQVGEDIGLEIHP--HLDQFLRVEE---------GRGLVQMGH-RQDNLHFQEEVFDDYAILIPAGTW----HNV 108 (148)
T ss_dssp EEEEEECTTCBCCCBCCT--TCEEEEEEEE---------SEEEEEEES-BTTBCCEEEEEETTCEEEECTTCE----EEE
T ss_pred EEEEEECCCCccCceECC--CCcEEEEEEe---------CEEEEEECC-ccccceeeEEECCCCEEEECCCCc----EEE
Confidence 344477889888888653 2223344544 22 222221 111122457899999999988764 555
Q ss_pred cC
Q psy11248 132 RP 133 (227)
Q Consensus 132 p~ 133 (227)
..
T Consensus 109 ~n 110 (148)
T 2oa2_A 109 RN 110 (148)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 28
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=20.19 E-value=1.9e+02 Score=19.91 Aligned_cols=53 Identities=19% Similarity=0.122 Sum_probs=32.1
Q ss_pred EEeeeCCCCCcCCCCCCCCCCCCCeEEEecCCCcccccCeeEeeecCCCCCCeEEEEecCCcEEEeccccc
Q psy11248 54 VINDYQPGGCIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKPIRVSEPVLYLPVQRGCVTLLRDFAA 124 (227)
Q Consensus 54 lVN~Y~~G~~I~pH~D~~~~fg~~IvsvSL~s~~~Lg~g~~m~F~~~~~~~~~~~v~L~~GSLLVM~G~ar 124 (227)
.+-.+.+|..+++|..+ ..+-++.++ |. +.+.-. + ..+.|.+|+++++.....
T Consensus 43 ~~~~~~~g~~~~~H~H~---~~e~~~vl~---------G~-~~~~~~---~--~~~~l~~Gd~~~ip~~~~ 95 (115)
T 1yhf_A 43 TVFSLDKGQEIGRHSSP---GDAMVTILS---------GL-AEITID---Q--ETYRVAEGQTIVMPAGIP 95 (115)
T ss_dssp EEEEECTTCEEEEECCS---SEEEEEEEE---------SE-EEEEET---T--EEEEEETTCEEEECTTSC
T ss_pred EEEEECCCCccCCEECC---CcEEEEEEe---------CE-EEEEEC---C--EEEEECCCCEEEECCCCC
Confidence 44467889888888763 223344443 22 122111 1 346799999999988765
Done!