Query psy11251
Match_columns 190
No_of_seqs 285 out of 1513
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 22:02:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11251.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11251hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kwj_A Zinc finger protein DPF 100.0 1.9E-30 6.6E-35 188.0 3.7 97 7-103 14-110 (114)
2 3v43_A Histone acetyltransfera 99.9 7.8E-29 2.7E-33 179.1 4.9 99 2-100 10-111 (112)
3 2ysm_A Myeloid/lymphoid or mix 99.9 1.9E-26 6.7E-31 166.2 6.8 92 9-103 15-106 (111)
4 3asl_A E3 ubiquitin-protein li 99.7 1.6E-18 5.6E-23 114.5 4.0 58 43-101 11-69 (70)
5 2e6s_A E3 ubiquitin-protein li 99.7 6.4E-18 2.2E-22 113.6 5.5 56 44-100 20-76 (77)
6 3shb_A E3 ubiquitin-protein li 99.7 5.8E-18 2E-22 113.7 4.4 57 43-100 19-76 (77)
7 4gne_A Histone-lysine N-methyl 99.6 7.3E-17 2.5E-21 114.7 4.3 76 10-95 21-98 (107)
8 2e6r_A Jumonji/ARID domain-con 99.6 2.9E-16 9.9E-21 109.1 3.5 59 43-101 8-66 (92)
9 1f62_A Transcription factor WS 99.6 7.3E-16 2.5E-20 95.6 2.2 48 53-100 2-49 (51)
10 3ask_A E3 ubiquitin-protein li 99.6 2.6E-15 8.8E-20 119.4 5.4 57 43-100 167-224 (226)
11 1fp0_A KAP-1 corepressor; PHD 99.5 8.4E-15 2.9E-19 100.2 6.0 57 43-102 17-73 (88)
12 1mm2_A MI2-beta; PHD, zinc fin 99.5 1.5E-14 5.1E-19 93.0 5.1 47 53-102 11-57 (61)
13 1xwh_A Autoimmune regulator; P 99.5 2.2E-14 7.4E-19 93.6 3.3 47 53-102 10-56 (66)
14 2yql_A PHD finger protein 21A; 99.5 2.9E-14 9.9E-19 90.1 3.5 45 53-100 11-55 (56)
15 2puy_A PHD finger protein 21A; 99.5 1.6E-14 5.6E-19 92.5 2.4 47 53-102 7-53 (60)
16 2lri_C Autoimmune regulator; Z 99.5 1.6E-14 5.5E-19 94.1 2.1 46 53-101 14-59 (66)
17 1wev_A Riken cDNA 1110020M19; 99.4 2.3E-14 7.8E-19 98.7 2.7 51 53-103 18-74 (88)
18 2l5u_A Chromodomain-helicase-D 99.4 3.2E-14 1.1E-18 91.4 3.2 47 52-101 12-58 (61)
19 2yt5_A Metal-response element- 99.4 6.7E-14 2.3E-18 91.2 1.4 50 53-102 8-62 (66)
20 3o36_A Transcription intermedi 99.3 9E-13 3.1E-17 102.4 5.2 47 53-102 6-52 (184)
21 3u5n_A E3 ubiquitin-protein li 99.3 1.2E-12 4E-17 103.5 5.8 48 53-103 9-56 (207)
22 2ku3_A Bromodomain-containing 99.3 1.6E-13 5.6E-18 90.6 0.1 48 53-102 18-67 (71)
23 2ro1_A Transcription intermedi 99.3 3.5E-12 1.2E-16 99.6 6.7 48 53-103 4-51 (189)
24 2k16_A Transcription initiatio 99.2 1.4E-12 4.6E-17 87.1 1.0 50 53-102 20-69 (75)
25 2l43_A N-teminal domain from h 99.2 7.1E-13 2.4E-17 91.1 -0.6 48 53-102 27-76 (88)
26 1fp0_A KAP-1 corepressor; PHD 99.1 7.4E-11 2.5E-15 80.6 5.0 48 8-58 29-76 (88)
27 1f62_A Transcription factor WS 99.1 1.8E-11 6.3E-16 75.5 1.7 40 10-52 9-48 (51)
28 1mm2_A MI2-beta; PHD, zinc fin 99.1 7.1E-11 2.4E-15 75.6 4.5 40 10-52 15-54 (61)
29 2lri_C Autoimmune regulator; Z 99.1 2.5E-11 8.5E-16 78.9 2.2 42 8-52 16-57 (66)
30 2lv9_A Histone-lysine N-methyl 99.1 1E-10 3.4E-15 81.9 3.9 45 56-101 32-76 (98)
31 1xwh_A Autoimmune regulator; P 99.0 9E-11 3.1E-15 76.3 1.7 41 9-52 13-53 (66)
32 1wen_A Inhibitor of growth fam 99.0 3.3E-10 1.1E-14 74.6 4.2 46 53-102 18-66 (71)
33 2e6s_A E3 ubiquitin-protein li 99.0 2.8E-10 9.7E-15 76.1 3.7 42 8-52 33-75 (77)
34 4gne_A Histone-lysine N-methyl 99.0 1.9E-10 6.6E-15 81.5 2.8 44 53-101 17-62 (107)
35 2lbm_A Transcriptional regulat 99.0 3.3E-11 1.1E-15 89.4 -1.3 83 14-102 12-118 (142)
36 3asl_A E3 ubiquitin-protein li 99.0 1.8E-10 6E-15 75.8 2.3 42 8-52 25-67 (70)
37 2puy_A PHD finger protein 21A; 99.0 1.2E-10 4.2E-15 74.3 1.5 41 9-52 10-50 (60)
38 2yql_A PHD finger protein 21A; 99.0 1.5E-10 5.1E-15 72.8 1.8 40 10-52 15-54 (56)
39 2l5u_A Chromodomain-helicase-D 99.0 9.9E-11 3.4E-15 74.9 0.9 40 10-52 17-56 (61)
40 1weu_A Inhibitor of growth fam 98.9 1.1E-09 3.6E-14 75.4 4.6 46 53-102 38-86 (91)
41 2vnf_A ING 4, P29ING4, inhibit 98.9 2.1E-10 7.1E-15 73.2 0.6 44 53-100 12-58 (60)
42 2jmi_A Protein YNG1, ING1 homo 98.9 5.6E-10 1.9E-14 76.7 2.7 44 53-100 28-75 (90)
43 3c6w_A P28ING5, inhibitor of g 98.9 2.6E-10 8.7E-15 72.5 0.7 44 53-100 11-57 (59)
44 2ysm_A Myeloid/lymphoid or mix 98.9 1.4E-09 4.9E-14 77.6 4.7 49 53-101 9-57 (111)
45 3shb_A E3 ubiquitin-protein li 98.9 8.9E-10 3.1E-14 73.6 2.7 42 8-52 33-75 (77)
46 2yt5_A Metal-response element- 98.8 4.8E-10 1.6E-14 72.7 0.7 51 2-52 8-59 (66)
47 2e6r_A Jumonji/ARID domain-con 98.8 4.6E-10 1.6E-14 77.6 0.3 39 11-52 26-64 (92)
48 3v43_A Histone acetyltransfera 98.8 2.3E-09 7.8E-14 76.7 3.9 47 3-52 64-110 (112)
49 2g6q_A Inhibitor of growth pro 98.8 6.2E-10 2.1E-14 71.4 0.7 45 53-101 13-60 (62)
50 2ku3_A Bromodomain-containing 98.8 4.3E-10 1.5E-14 74.1 -0.1 46 2-52 18-64 (71)
51 3o36_A Transcription intermedi 98.8 2.2E-09 7.6E-14 83.1 3.7 42 8-52 8-49 (184)
52 1wev_A Riken cDNA 1110020M19; 98.8 1.4E-09 4.6E-14 74.7 1.9 51 2-52 18-70 (88)
53 2ro1_A Transcription intermedi 98.8 3.8E-09 1.3E-13 82.2 4.4 43 7-52 5-47 (189)
54 3u5n_A E3 ubiquitin-protein li 98.8 2.4E-09 8.2E-14 84.5 2.8 42 8-52 11-52 (207)
55 2l43_A N-teminal domain from h 98.7 1.4E-09 4.8E-14 74.6 0.1 37 11-52 37-73 (88)
56 2k16_A Transcription initiatio 98.7 4.1E-09 1.4E-13 70.0 1.4 39 11-52 28-66 (75)
57 2kwj_A Zinc finger protein DPF 98.7 4.2E-09 1.4E-13 75.6 1.3 42 8-52 65-106 (114)
58 3o70_A PHD finger protein 13; 98.7 1.1E-08 3.9E-13 66.6 3.2 46 53-100 21-66 (68)
59 1x4i_A Inhibitor of growth pro 98.7 3.5E-09 1.2E-13 69.5 0.4 43 57-102 11-56 (70)
60 1wen_A Inhibitor of growth fam 98.6 2.8E-08 9.5E-13 65.3 3.4 35 13-52 26-63 (71)
61 1we9_A PHD finger family prote 98.6 1.8E-08 6.2E-13 64.8 2.3 50 53-102 8-59 (64)
62 2lv9_A Histone-lysine N-methyl 98.6 2.8E-08 9.6E-13 69.4 3.0 42 7-52 33-74 (98)
63 1weu_A Inhibitor of growth fam 98.6 6.1E-08 2.1E-12 66.6 4.6 35 13-52 46-83 (91)
64 2lbm_A Transcriptional regulat 98.5 8.5E-09 2.9E-13 76.5 -0.8 46 7-52 66-115 (142)
65 1wee_A PHD finger family prote 98.5 5E-08 1.7E-12 64.2 2.6 48 53-101 18-66 (72)
66 3c6w_A P28ING5, inhibitor of g 98.5 1.6E-08 5.3E-13 64.2 -0.2 35 13-52 19-56 (59)
67 2xb1_A Pygopus homolog 2, B-ce 98.5 5E-08 1.7E-12 68.9 2.1 48 53-102 5-62 (105)
68 3o7a_A PHD finger protein 13 v 98.4 5.1E-08 1.7E-12 60.1 1.7 44 56-100 8-51 (52)
69 2vnf_A ING 4, P29ING4, inhibit 98.4 2.2E-08 7.4E-13 63.7 -0.2 35 13-52 20-57 (60)
70 2g6q_A Inhibitor of growth pro 98.4 2.3E-08 8E-13 64.0 -0.2 35 13-52 21-58 (62)
71 3ql9_A Transcriptional regulat 98.4 7.3E-09 2.5E-13 75.6 -3.4 47 53-102 59-112 (129)
72 2jmi_A Protein YNG1, ING1 homo 98.4 9.8E-08 3.4E-12 65.4 1.8 35 13-52 36-74 (90)
73 2kgg_A Histone demethylase jar 98.4 1.8E-07 6.2E-12 57.6 2.8 47 3-52 5-52 (52)
74 2rsd_A E3 SUMO-protein ligase 98.4 1.6E-07 5.4E-12 61.2 2.5 46 56-101 14-65 (68)
75 1wew_A DNA-binding family prot 98.4 6.4E-08 2.2E-12 64.7 0.5 47 53-102 18-73 (78)
76 2vpb_A Hpygo1, pygopus homolog 98.3 2.5E-08 8.5E-13 64.4 -1.9 51 2-52 10-64 (65)
77 2xb1_A Pygopus homolog 2, B-ce 98.3 6.7E-08 2.3E-12 68.3 -0.3 51 2-52 5-59 (105)
78 2vpb_A Hpygo1, pygopus homolog 98.3 4.1E-08 1.4E-12 63.4 -1.3 47 53-99 10-64 (65)
79 2kgg_A Histone demethylase jar 98.3 8E-08 2.7E-12 59.3 -0.0 47 53-99 4-52 (52)
80 1wem_A Death associated transc 98.3 3.6E-08 1.2E-12 65.6 -1.9 49 53-102 18-71 (76)
81 1we9_A PHD finger family prote 98.3 2.7E-07 9.2E-12 59.2 2.2 49 2-52 8-56 (64)
82 4bbq_A Lysine-specific demethy 98.3 7.8E-08 2.7E-12 69.0 -0.6 83 19-101 18-114 (117)
83 1wep_A PHF8; structural genomi 98.3 8.5E-08 2.9E-12 64.3 -0.7 49 53-102 14-64 (79)
84 2ri7_A Nucleosome-remodeling f 98.2 1E-07 3.6E-12 72.9 -1.7 49 53-102 10-60 (174)
85 3ql9_A Transcriptional regulat 98.1 1.3E-07 4.5E-12 68.9 -1.8 46 7-52 60-109 (129)
86 3o7a_A PHD finger protein 13 v 98.1 6.4E-07 2.2E-11 55.1 1.3 38 11-52 13-50 (52)
87 1x4i_A Inhibitor of growth pro 98.1 2.7E-07 9.4E-12 60.3 -0.5 35 13-52 16-53 (70)
88 3o70_A PHD finger protein 13; 98.1 1.1E-06 3.9E-11 57.1 1.8 39 10-52 27-65 (68)
89 1wee_A PHD finger family prote 98.1 8.7E-07 3E-11 58.2 1.0 39 11-52 26-64 (72)
90 3kqi_A GRC5, PHD finger protei 98.0 4.1E-07 1.4E-11 60.3 -1.1 47 56-102 14-62 (75)
91 1wep_A PHF8; structural genomi 98.0 1.9E-06 6.5E-11 57.6 1.4 41 10-52 21-61 (79)
92 1wem_A Death associated transc 97.9 5.1E-07 1.7E-11 59.9 -1.7 43 10-52 24-68 (76)
93 2rsd_A E3 SUMO-protein ligase 97.9 1.5E-06 5.2E-11 56.4 0.5 45 8-52 16-63 (68)
94 2ri7_A Nucleosome-remodeling f 97.8 1.4E-06 4.7E-11 66.5 -1.7 46 5-52 12-57 (174)
95 1wil_A KIAA1045 protein; ring 97.7 4.8E-06 1.6E-10 55.6 0.4 49 53-102 17-77 (89)
96 3lqh_A Histone-lysine N-methyl 97.7 4.8E-06 1.7E-10 64.2 -0.2 51 53-103 4-65 (183)
97 1wew_A DNA-binding family prot 97.7 6.6E-06 2.3E-10 54.8 -0.0 42 11-52 25-70 (78)
98 3kqi_A GRC5, PHD finger protei 97.6 3.8E-06 1.3E-10 55.5 -1.3 40 11-52 20-59 (75)
99 3lqh_A Histone-lysine N-methyl 97.5 2.7E-05 9.1E-10 60.1 1.1 51 2-52 4-61 (183)
100 3pur_A Lysine-specific demethy 97.3 7.9E-05 2.7E-09 65.7 2.5 50 1-52 43-92 (528)
101 3kv5_D JMJC domain-containing 97.2 1.6E-05 5.4E-10 70.1 -3.1 45 56-102 41-89 (488)
102 1wil_A KIAA1045 protein; ring 96.9 0.00029 9.9E-09 47.0 1.3 41 12-52 25-74 (89)
103 4bbq_A Lysine-specific demethy 96.8 0.00022 7.6E-09 50.7 0.4 43 10-52 69-112 (117)
104 3pur_A Lysine-specific demethy 96.6 0.00051 1.7E-08 60.6 0.9 83 13-101 9-94 (528)
105 3kv4_A PHD finger protein 8; e 96.5 0.0001 3.5E-09 64.2 -4.1 46 56-101 9-56 (447)
106 3kv5_D JMJC domain-containing 96.4 0.00025 8.5E-09 62.4 -1.8 40 11-52 47-86 (488)
107 3kv4_A PHD finger protein 8; e 96.4 0.00021 7.2E-09 62.2 -2.4 41 10-52 14-54 (447)
108 4akv_A Sorting nexin-33; trans 96.4 0.00084 2.9E-08 57.4 1.3 62 121-182 259-320 (386)
109 3dyt_A Sorting nexin-9; 3-heli 96.2 0.00049 1.7E-08 58.3 -1.3 65 121-185 239-303 (366)
110 2ku7_A MLL1 PHD3-CYP33 RRM chi 96.1 0.00069 2.4E-08 48.7 -0.9 37 15-51 1-41 (140)
111 2ku7_A MLL1 PHD3-CYP33 RRM chi 95.2 0.0036 1.2E-07 44.8 0.3 38 65-102 1-45 (140)
112 3rsn_A SET1/ASH2 histone methy 93.1 0.049 1.7E-06 41.4 2.6 47 56-102 9-60 (177)
113 3a1b_A DNA (cytosine-5)-methyl 90.8 0.031 1.1E-06 41.7 -0.9 44 8-51 83-131 (159)
114 3rsn_A SET1/ASH2 histone methy 89.9 0.13 4.3E-06 39.1 1.8 23 12-34 16-38 (177)
115 2lq6_A Bromodomain-containing 88.5 0.15 5.1E-06 34.2 1.2 38 40-82 10-49 (87)
116 4ap4_A E3 ubiquitin ligase RNF 87.8 0.0056 1.9E-07 43.4 -6.8 79 14-103 24-124 (133)
117 3a1b_A DNA (cytosine-5)-methyl 85.8 0.08 2.7E-06 39.5 -1.5 47 53-102 81-135 (159)
118 2lk0_A RNA-binding protein 5; 85.6 0.42 1.4E-05 25.7 1.8 18 42-59 2-27 (32)
119 2k1p_A Zinc finger RAN-binding 84.3 0.74 2.5E-05 24.9 2.4 11 42-52 3-13 (33)
120 1iym_A EL5; ring-H2 finger, ub 83.7 0.86 2.9E-05 26.7 2.8 27 7-33 12-38 (55)
121 2pv0_B DNA (cytosine-5)-methyl 83.2 0.23 7.8E-06 42.2 -0.1 46 7-52 96-146 (386)
122 1n0z_A ZNF265; zinc finger, RN 82.0 1.2 4E-05 25.9 2.8 21 40-60 9-39 (45)
123 2pv0_B DNA (cytosine-5)-methyl 81.0 0.053 1.8E-06 46.1 -4.7 47 53-102 95-149 (386)
124 1iym_A EL5; ring-H2 finger, ub 78.8 0.83 2.8E-05 26.8 1.4 45 53-101 7-52 (55)
125 2ct0_A Non-SMC element 1 homol 72.7 0.64 2.2E-05 30.0 -0.3 47 53-103 17-63 (74)
126 2ect_A Ring finger protein 126 71.2 1.8 6.1E-05 27.3 1.6 47 53-103 17-63 (78)
127 1weq_A PHD finger protein 7; s 69.8 5.6 0.00019 26.3 3.8 34 13-52 43-77 (85)
128 2d8s_A Cellular modulator of i 65.6 2 6.9E-05 27.9 1.0 49 53-103 17-69 (80)
129 1weq_A PHD finger protein 7; s 63.4 4 0.00014 27.0 2.1 33 65-100 45-78 (85)
130 1nj3_A NPL4; NZF domain, rubre 63.4 4.1 0.00014 21.3 1.8 10 43-52 4-13 (31)
131 2ecm_A Ring finger and CHY zin 62.2 1.5 5.2E-05 25.5 -0.1 26 8-33 13-38 (55)
132 2d9g_A YY1-associated factor 2 61.6 5.9 0.0002 23.7 2.5 12 41-52 7-18 (53)
133 2lbz_A Thuricin17, thurincin H 61.5 1.6 5.4E-05 22.4 -0.1 14 45-58 1-14 (31)
134 2rgt_A Fusion of LIM/homeobox 61.4 2.6 8.7E-05 31.1 1.0 38 42-80 50-93 (169)
135 3a9j_C Mitogen-activated prote 61.3 4.3 0.00015 21.7 1.7 10 43-52 6-15 (34)
136 3nw0_A Non-structural maintena 60.6 1.5 5.2E-05 34.6 -0.4 47 53-103 182-228 (238)
137 3k1l_B Fancl; UBC, ring, RWD, 58.7 3.5 0.00012 34.6 1.4 50 53-102 310-371 (381)
138 2kiz_A E3 ubiquitin-protein li 56.8 0.54 1.8E-05 29.1 -3.0 46 53-102 16-61 (69)
139 2cup_A Skeletal muscle LIM-pro 55.5 13 0.00045 24.3 3.8 7 19-25 8-14 (101)
140 2d8v_A Zinc finger FYVE domain 55.4 5.4 0.00019 25.1 1.6 12 67-78 29-40 (67)
141 1x4j_A Ring finger protein 38; 53.7 0.42 1.4E-05 30.3 -4.0 46 53-102 25-70 (75)
142 2jtn_A LIM domain-binding prot 53.5 2.7 9.1E-05 31.4 -0.1 37 16-60 60-96 (182)
143 2egp_A Tripartite motif-contai 53.5 4.7 0.00016 25.2 1.1 13 21-33 29-41 (79)
144 2c6a_A Ubiquitin-protein ligas 53.4 6.8 0.00023 22.8 1.6 10 43-52 11-20 (46)
145 2dlq_A GLI-kruppel family memb 52.7 6.7 0.00023 26.1 1.9 91 12-103 3-105 (124)
146 1x3h_A Leupaxin; paxillin fami 52.1 8.4 0.00029 24.2 2.2 25 53-80 17-41 (80)
147 4a0k_B E3 ubiquitin-protein li 51.0 3.2 0.00011 29.1 0.0 19 17-35 79-97 (117)
148 2ecl_A Ring-box protein 2; RNF 50.2 2.1 7.2E-05 27.5 -1.0 29 70-102 46-74 (81)
149 6rxn_A Rubredoxin; electron tr 49.2 7.8 0.00027 22.5 1.5 12 91-102 29-40 (46)
150 1kbe_A Kinase suppressor of RA 48.0 8.9 0.00031 22.5 1.7 29 52-82 15-43 (49)
151 2cuq_A Four and A half LIM dom 47.8 21 0.00071 22.2 3.6 26 53-81 17-42 (80)
152 3gj3_B Nuclear pore complex pr 47.7 10 0.00034 20.4 1.7 24 43-73 5-28 (33)
153 1zfo_A LAsp-1; LIM domain, zin 47.4 9 0.00031 19.9 1.5 26 53-80 5-30 (31)
154 1e8j_A Rubredoxin; iron-sulfur 47.1 22 0.00076 21.0 3.4 35 17-52 4-43 (52)
155 1bor_A Transcription factor PM 47.0 26 0.00089 20.3 3.8 40 53-102 8-47 (56)
156 2ep4_A Ring finger protein 24; 46.7 0.84 2.9E-05 28.6 -3.4 47 53-103 17-63 (74)
157 4cpa_I Metallocarboxypeptidase 46.5 13 0.00046 20.1 2.0 25 76-100 4-29 (38)
158 1faq_A RAF-1; transferase, ser 46.5 9.1 0.00031 22.1 1.5 28 53-82 16-43 (52)
159 1weo_A Cellulose synthase, cat 46.2 4.6 0.00016 27.0 0.2 44 3-52 22-65 (93)
160 2l0b_A E3 ubiquitin-protein li 46.1 0.9 3.1E-05 30.0 -3.4 46 53-102 42-87 (91)
161 2ebr_A Nuclear pore complex pr 45.3 16 0.00054 21.3 2.4 11 41-51 7-17 (47)
162 2co8_A NEDD9 interacting prote 45.2 15 0.0005 23.4 2.6 38 14-59 13-50 (82)
163 2crc_A Ubiquitin conjugating e 44.8 21 0.00072 21.2 3.0 10 43-52 8-17 (52)
164 3gj5_B Nuclear pore complex pr 44.7 11 0.00038 20.4 1.5 25 42-73 4-28 (34)
165 3l11_A E3 ubiquitin-protein li 43.3 8 0.00027 26.2 1.1 45 53-103 17-61 (115)
166 1x6a_A LIMK-2, LIM domain kina 43.0 30 0.001 21.5 3.9 26 53-81 17-42 (81)
167 2yrc_A Protein transport prote 41.4 16 0.00056 22.2 2.2 37 8-51 1-39 (59)
168 1v5n_A PDI-like hypothetical p 41.4 6.6 0.00023 26.0 0.4 31 53-84 49-79 (89)
169 2cr8_A MDM4 protein; ZF-ranbp 41.2 12 0.00042 22.2 1.5 11 42-52 8-18 (53)
170 3pfq_A PKC-B, PKC-beta, protei 40.5 20 0.0007 32.1 3.6 70 13-82 62-146 (674)
171 2els_A Zinc finger protein 406 39.3 13 0.00045 18.6 1.3 17 11-27 4-20 (36)
172 2ehe_A Four and A half LIM dom 39.2 36 0.0012 21.2 3.8 15 44-59 37-51 (82)
173 1dx8_A Rubredoxin; electron tr 38.8 42 0.0014 21.1 3.9 13 91-103 39-51 (70)
174 2ebq_A Nuclear pore complex pr 37.1 24 0.00081 20.5 2.3 13 40-52 6-18 (47)
175 3gj8_B Nuclear pore complex pr 36.8 16 0.00053 24.2 1.7 11 42-52 62-72 (92)
176 1v87_A Deltex protein 2; ring- 36.6 11 0.00036 25.4 0.8 16 19-34 58-73 (114)
177 2enz_A NPKC-theta, protein kin 36.0 25 0.00085 21.4 2.4 30 53-82 25-56 (65)
178 1jm7_A BRCA1, breast cancer ty 35.8 11 0.00038 25.1 0.8 47 53-103 23-69 (112)
179 2ct7_A Ring finger protein 31; 35.3 20 0.00069 23.2 2.0 18 65-82 42-59 (86)
180 2fnf_X Putative RAS effector N 34.8 18 0.00062 22.8 1.7 29 53-82 37-65 (72)
181 4rxn_A Rubredoxin; electron tr 34.8 20 0.00069 21.4 1.8 12 91-102 35-46 (54)
182 2cu8_A Cysteine-rich protein 2 34.6 15 0.00053 22.7 1.3 15 44-59 30-44 (76)
183 1x63_A Skeletal muscle LIM-pro 34.1 39 0.0013 21.0 3.3 9 73-81 36-44 (82)
184 3dpl_R Ring-box protein 1; ubi 33.2 2 6.7E-05 29.5 -3.4 19 16-34 67-85 (106)
185 2elr_A Zinc finger protein 406 32.9 28 0.00096 17.1 2.1 15 13-27 6-20 (36)
186 3b08_B Ranbp-type and C3HC4-ty 32.5 32 0.0011 21.3 2.5 10 43-52 6-15 (64)
187 2egq_A FHL1 protein; LIM domai 32.4 36 0.0012 20.9 2.8 8 73-80 39-46 (77)
188 1vyx_A ORF K3, K3RING; zinc-bi 32.4 5.9 0.0002 24.1 -1.0 48 53-102 8-57 (60)
189 2ecj_A Tripartite motif-contai 32.3 8.2 0.00028 22.4 -0.3 42 53-98 17-58 (58)
190 2ecy_A TNF receptor-associated 32.0 4.1 0.00014 24.7 -1.8 29 71-102 32-60 (66)
191 2ysl_A Tripartite motif-contai 31.4 4.7 0.00016 24.8 -1.6 46 53-102 22-67 (73)
192 2d8y_A Eplin protein; LIM doma 31.1 24 0.00081 22.7 1.8 10 49-58 40-49 (91)
193 1iml_A CRIP, cysteine rich int 31.0 14 0.00049 22.8 0.7 14 45-59 22-35 (76)
194 2eli_A Protein kinase C alpha 30.8 31 0.0011 22.3 2.4 30 53-82 30-61 (85)
195 1pft_A TFIIB, PFTFIIBN; N-term 30.5 19 0.00066 20.7 1.2 13 65-77 23-35 (50)
196 1wig_A KIAA1808 protein; LIM d 30.5 44 0.0015 20.4 3.0 34 18-60 7-40 (73)
197 2elv_A Zinc finger protein 406 29.9 24 0.00084 17.4 1.5 16 12-27 5-20 (36)
198 2jrp_A Putative cytoplasmic pr 29.6 44 0.0015 21.7 2.9 23 3-25 5-27 (81)
199 2v3b_B Rubredoxin 2, rubredoxi 29.5 39 0.0013 20.1 2.4 12 91-102 35-46 (55)
200 2ebv_A Nuclear pore complex pr 29.5 38 0.0013 20.5 2.4 27 40-73 26-52 (57)
201 1x64_A Alpha-actinin-2 associa 29.1 1.1E+02 0.0037 19.2 5.1 40 12-60 21-60 (89)
202 2elt_A Zinc finger protein 406 28.9 25 0.00086 17.3 1.4 16 12-27 5-20 (36)
203 2kn9_A Rubredoxin; metalloprot 28.4 39 0.0013 22.0 2.4 12 91-102 59-70 (81)
204 2d8t_A Dactylidin, ring finger 27.7 6.7 0.00023 24.1 -1.3 44 53-103 17-60 (71)
205 2elq_A Zinc finger protein 406 27.3 27 0.00093 17.2 1.4 16 12-27 5-20 (36)
206 2ecv_A Tripartite motif-contai 27.0 6.8 0.00023 24.6 -1.4 48 53-103 21-70 (85)
207 2ea6_A Ring finger protein 4; 27.0 2.5 8.6E-05 25.6 -3.5 18 15-32 33-50 (69)
208 2dj7_A Actin-binding LIM prote 26.9 32 0.0011 21.6 1.9 14 44-58 36-49 (80)
209 1yfu_A 3-hydroxyanthranilate-3 26.5 22 0.00075 26.6 1.1 8 45-52 122-129 (174)
210 2yuu_A NPKC-delta, protein kin 26.4 33 0.0011 22.0 1.9 30 53-82 30-61 (83)
211 2dmd_A Zinc finger protein 64, 26.1 33 0.0011 21.4 1.9 16 12-27 4-19 (96)
212 1ptq_A Protein kinase C delta 26.1 12 0.00042 21.3 -0.3 30 53-82 13-44 (50)
213 1zvf_A 3-hydroxyanthranilate 3 25.5 24 0.00081 26.5 1.1 8 45-52 124-131 (176)
214 3ng2_A RNF4, snurf, ring finge 24.9 4.6 0.00016 24.6 -2.5 20 14-33 27-46 (71)
215 1jm7_B BARD1, BRCA1-associated 24.7 58 0.002 21.8 3.0 42 53-102 24-65 (117)
216 2enn_A NPKC-theta, protein kin 24.3 21 0.00073 22.6 0.6 31 53-83 36-68 (77)
217 1g25_A CDK-activating kinase a 24.2 6.3 0.00022 23.7 -2.0 13 20-32 24-36 (65)
218 2e61_A Zinc finger CW-type PWW 23.7 59 0.002 20.3 2.6 37 8-49 10-48 (69)
219 2pk7_A Uncharacterized protein 23.5 34 0.0011 21.5 1.4 12 65-76 25-36 (69)
220 1e4u_A Transcriptional repress 23.4 15 0.00052 23.4 -0.3 10 22-31 33-42 (78)
221 1s24_A Rubredoxin 2; electron 23.4 59 0.002 21.4 2.6 12 91-102 67-78 (87)
222 2dkt_A Ring finger and CHY zin 23.3 28 0.00097 25.2 1.2 7 92-98 98-104 (143)
223 2ct2_A Tripartite motif protei 23.2 13 0.00044 23.5 -0.7 12 21-32 36-47 (88)
224 1p7a_A BF3, BKLF, kruppel-like 22.8 37 0.0013 16.8 1.3 15 13-27 8-22 (37)
225 4b2u_A S67; toxin, ICK; NMR {S 22.8 27 0.00091 18.4 0.7 12 41-52 14-25 (36)
226 1x62_A C-terminal LIM domain p 22.7 1.3E+02 0.0045 18.3 4.3 39 12-59 11-49 (79)
227 1znf_A 31ST zinc finger from X 22.7 30 0.001 15.5 0.9 10 18-27 3-12 (27)
228 3f6q_B LIM and senescent cell 22.2 50 0.0017 19.6 2.1 17 43-60 32-48 (72)
229 2csz_A Synaptotagmin-like prot 22.1 72 0.0024 20.4 2.8 11 91-101 63-73 (76)
230 1a7i_A QCRP2 (LIM1); LIM domai 22.0 30 0.001 21.6 1.0 27 53-81 9-35 (81)
231 1ard_A Yeast transcription fac 21.9 30 0.001 15.7 0.8 11 17-27 3-13 (29)
232 2a20_A Regulating synaptic mem 21.9 14 0.0005 22.6 -0.5 12 90-101 49-60 (62)
233 2elp_A Zinc finger protein 406 21.8 41 0.0014 16.6 1.4 15 13-27 6-20 (37)
234 2ysj_A Tripartite motif-contai 21.8 3.9 0.00013 24.5 -3.3 12 71-82 37-48 (63)
235 1chc_A Equine herpes virus-1 r 21.7 5.4 0.00018 24.2 -2.7 15 19-33 21-35 (68)
236 2ee8_A Protein ODD-skipped-rel 21.6 1.3E+02 0.0044 18.8 4.3 15 13-27 14-28 (106)
237 1y8f_A UNC-13 homolog A, MUNC1 21.6 36 0.0012 20.7 1.2 30 53-82 26-57 (66)
238 3he4_A Synzip6; heterodimeric 21.6 44 0.0015 19.2 1.5 16 166-181 25-40 (56)
239 2m0e_A Zinc finger and BTB dom 21.5 37 0.0013 15.3 1.1 10 18-27 4-13 (29)
240 1g47_A Pinch protein; LIM doma 21.4 91 0.0031 18.8 3.3 40 14-60 9-48 (77)
241 1x4l_A Skeletal muscle LIM-pro 21.4 60 0.0021 19.5 2.3 16 43-59 28-43 (72)
242 3gj7_B Nuclear pore complex pr 21.3 43 0.0015 22.5 1.7 11 42-52 69-79 (98)
243 2xeu_A Ring finger protein 4; 21.3 4.6 0.00016 24.0 -3.0 20 14-33 20-39 (64)
244 2kvh_A Zinc finger and BTB dom 21.3 29 0.00099 15.7 0.6 11 17-27 4-14 (27)
245 2ecw_A Tripartite motif-contai 21.1 11 0.00037 23.6 -1.4 11 22-32 37-47 (85)
246 1x5w_A Zinc finger protein 64, 20.9 40 0.0014 19.7 1.4 18 10-27 3-20 (70)
247 2elx_A Zinc finger protein 406 20.7 33 0.0011 16.6 0.8 14 14-27 5-18 (35)
248 1x61_A Thyroid receptor intera 20.5 76 0.0026 19.0 2.7 10 49-58 31-40 (72)
249 2dlo_A Thyroid receptor-intera 20.5 1.1E+02 0.0037 18.8 3.5 16 43-59 34-49 (81)
250 1paa_A Yeast transcription fac 20.3 34 0.0012 15.7 0.8 11 17-27 3-13 (30)
251 2l9z_A PR domain zinc finger p 20.0 33 0.0011 19.1 0.7 23 10-32 5-27 (39)
No 1
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=99.96 E-value=1.9e-30 Score=188.03 Aligned_cols=97 Identities=74% Similarity=1.540 Sum_probs=89.7
Q ss_pred cCCCCCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCCCCCcCCCCCCCCCccccCccCCcccCCCCCCCCC
Q psy11251 7 AEKSGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECKCCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQ 86 (190)
Q Consensus 7 ~~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~ 86 (190)
|++.|++|+||.|++|+++||++|+++++.+...++.+.|+|++|++|.+|+...+++.||.||.|+++||++|+.||+.
T Consensus 14 n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~ 93 (114)
T 2kwj_A 14 NKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECKSCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVA 93 (114)
T ss_dssp CTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGCCCTTTTCCTTTTTEEECSSSCCEEETTTSSSCCS
T ss_pred cccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccCccCcccccCCCCceEEcCCCCccccccccCCCcc
Confidence 46789999999999999999999999887776677889999999999999999888899999999999999999999999
Q ss_pred CCCCCCccCcccccccc
Q psy11251 87 TPPEGSWSCQLCLKEFH 103 (190)
Q Consensus 87 ~~p~~~W~C~~C~~~~~ 103 (190)
.+|+|+|+|+.|.....
T Consensus 94 ~~P~g~W~C~~C~~~~~ 110 (114)
T 2kwj_A 94 EPPEGSWSCHLCWELLK 110 (114)
T ss_dssp SCCSSCCCCHHHHHHHH
T ss_pred CCCCCCeECccccchhh
Confidence 99999999999986543
No 2
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=99.95 E-value=7.8e-29 Score=179.05 Aligned_cols=99 Identities=52% Similarity=1.236 Sum_probs=87.8
Q ss_pred CCCCcc--CCCCCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCCCCCcCCCC-CCCCCccccCccCCcccC
Q psy11251 2 LCPTQA--EKSGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECKCCSVCGTS-DNDDQLLFCDDCDRGYHM 78 (190)
Q Consensus 2 ~C~~~~--~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~~C~~~-~~~~~ll~C~~C~~~~H~ 78 (190)
+|...+ ++.|++|+||.|++|+++||++|+++.+++...++++.|+|++|++|.+|+.. .+++.||+||.|+++||+
T Consensus 10 ~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~vC~~~~~~~~~ll~Cd~C~~~yH~ 89 (112)
T 3v43_A 10 FCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQGKNADNMLFCDSCDRGFHM 89 (112)
T ss_dssp TTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTCCBTTTCCCCCTTCCCEECTTTCCEECG
T ss_pred ccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCCccccccCcCCCccceEEcCCCCCeeec
Confidence 455543 45688999999999999999999998777777788999999999999999975 355789999999999999
Q ss_pred CCCCCCCCCCCCCCccCccccc
Q psy11251 79 YCLVPPIQTPPEGSWSCQLCLK 100 (190)
Q Consensus 79 ~Cl~p~l~~~p~~~W~C~~C~~ 100 (190)
+|+.|++..+|+++|+|+.|..
T Consensus 90 ~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 90 ECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp GGCSSCCSSCCSSCCCCTTTSC
T ss_pred ccCCCCCCCCCCCCeECCCCCC
Confidence 9999999999999999999975
No 3
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=99.93 E-value=1.9e-26 Score=166.19 Aligned_cols=92 Identities=37% Similarity=0.930 Sum_probs=81.4
Q ss_pred CCCCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCCCCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCC
Q psy11251 9 KSGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECKCCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTP 88 (190)
Q Consensus 9 ~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~ 88 (190)
..|+.++||.|++|+++||++|++++. ..++.+.|+|++|++|.+|++.+++..||.||.|+++||++|+.||+..+
T Consensus 15 ~~g~~~~ll~C~~C~~~~H~~Cl~~~~---~~~~~~~W~C~~C~~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~ 91 (111)
T 2ysm_A 15 SPGDLLDQFFCTTCGQHYHGMCLDIAV---TPLKRAGWQCPECKVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSV 91 (111)
T ss_dssp CCCCTTTSEECSSSCCEECTTTTTCCC---CTTTSTTCCCTTTCCCTTTCCCSCCTTEEECSSSCCEEEGGGSSSCCSSC
T ss_pred CCCCCcCCeECCCCCCCcChHHhCCcc---ccccccCccCCcCCcccccCccCCCCCeeECCCCCcHHhHHhcCCccccC
Confidence 345667779999999999999998764 23567899999999999999988888899999999999999999999999
Q ss_pred CCCCccCcccccccc
Q psy11251 89 PEGSWSCQLCLKEFH 103 (190)
Q Consensus 89 p~~~W~C~~C~~~~~ 103 (190)
|+++|+|+.|.....
T Consensus 92 P~g~W~C~~C~~c~~ 106 (111)
T 2ysm_A 92 PTNGWKCKNCRICIS 106 (111)
T ss_dssp CSSCCCCHHHHCCSC
T ss_pred CCCCcCCcCCcCcCC
Confidence 999999999987543
No 4
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=99.73 E-value=1.6e-18 Score=114.53 Aligned_cols=58 Identities=36% Similarity=1.063 Sum_probs=54.6
Q ss_pred CCCcccCCCCCCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCC-CccCcccccc
Q psy11251 43 QYRWQCIECKCCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEG-SWSCQLCLKE 101 (190)
Q Consensus 43 ~~~W~C~~C~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~-~W~C~~C~~~ 101 (190)
.+.|+|++| .|.+|++.++++.||.||.|+++||++|++|||..+|+| +|+|+.|...
T Consensus 11 ~~~w~C~~C-~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 11 DVNRLCRVC-ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 69 (70)
T ss_dssp CTTSCCTTT-SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSCC
T ss_pred CCCeECCCC-CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccCc
Confidence 468999999 999999988899999999999999999999999999999 9999999853
No 5
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=6.4e-18 Score=113.56 Aligned_cols=56 Identities=39% Similarity=1.068 Sum_probs=53.3
Q ss_pred CCcccCCCCCCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCC-CccCccccc
Q psy11251 44 YRWQCIECKCCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEG-SWSCQLCLK 100 (190)
Q Consensus 44 ~~W~C~~C~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~-~W~C~~C~~ 100 (190)
+.|+|++| .|.+|++..+++.||+||.|+++||++|++|||..+|+| +|+|+.|..
T Consensus 20 ~~w~C~~c-~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 20 PEKKCHSC-SCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSSCCSSS-SCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCeECCCC-CCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 57999999 999999988899999999999999999999999999999 999999974
No 6
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=99.71 E-value=5.8e-18 Score=113.69 Aligned_cols=57 Identities=37% Similarity=1.068 Sum_probs=53.5
Q ss_pred CCCcccCCCCCCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCC-ccCccccc
Q psy11251 43 QYRWQCIECKCCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGS-WSCQLCLK 100 (190)
Q Consensus 43 ~~~W~C~~C~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~-W~C~~C~~ 100 (190)
...|+|+.| .|.+|++..+++.||+||.|+++||++|+.|||..+|+++ |+|+.|+.
T Consensus 19 ~~~W~C~~C-~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 19 DVNRLCRVC-ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp CTTSCCTTT-SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred CCCCCCCCC-cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 468999999 9999999988899999999999999999999999999998 99999975
No 7
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=99.65 E-value=7.3e-17 Score=114.72 Aligned_cols=76 Identities=22% Similarity=0.545 Sum_probs=67.6
Q ss_pred CCCCCCceecC--CCCCCCCCCCCCCCcccccccCCCCcccCCCCCCCcCCCCCCCCCccccCccCCcccCCCCCCCCCC
Q psy11251 10 SGQPEDLVSCS--DCGRSGHPTCLQFTNNMKVSVKQYRWQCIECKCCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQT 87 (190)
Q Consensus 10 ~g~~~~ll~C~--~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~ 87 (190)
.+++|+||.|| +|+++||+.|+++ ..+|.+.|+|+.| .|.+|++.. .+.|..|+++||..|+.+.|..
T Consensus 21 C~~~G~ll~CD~~~Cp~~fH~~Cl~L-----~~~P~g~W~Cp~c-~C~~C~k~~----~~~C~~Cp~sfC~~c~~g~l~~ 90 (107)
T 4gne_A 21 CGDGGELVMCDKKDCPKAYHLLCLNL-----TQPPYGKWECPWH-QCDECSSAA----VSFCEFCPHSFCKDHEKGALVP 90 (107)
T ss_dssp TCCCSEEEECCSTTCCCEECTGGGTC-----SSCCSSCCCCGGG-BCTTTCSBC----CEECSSSSCEECTTTCTTSCEE
T ss_pred CCCCCcEeEECCCCCCcccccccCcC-----CcCCCCCEECCCC-CCCcCCCCC----CcCcCCCCcchhhhccCCccee
Confidence 45789999999 8999999999974 4678999999999 699999643 3889999999999999999998
Q ss_pred CCCCCccC
Q psy11251 88 PPEGSWSC 95 (190)
Q Consensus 88 ~p~~~W~C 95 (190)
.+.+.|+|
T Consensus 91 ~~~~~~~c 98 (107)
T 4gne_A 91 SALEGRLC 98 (107)
T ss_dssp CTTTTCEE
T ss_pred cCCCCcee
Confidence 88999987
No 8
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.60 E-value=2.9e-16 Score=109.08 Aligned_cols=59 Identities=44% Similarity=1.096 Sum_probs=54.9
Q ss_pred CCCcccCCCCCCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCcccccc
Q psy11251 43 QYRWQCIECKCCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKE 101 (190)
Q Consensus 43 ~~~W~C~~C~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~ 101 (190)
...|.|.++.+|.+|+..++.+.||+||.|+++||++|+.||+..+|.++|+|+.|...
T Consensus 8 ~s~~~~~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 8 HSSAQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCCCCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred CchhhccCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCc
Confidence 56899999999999998777778999999999999999999999999999999999864
No 9
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.56 E-value=7.3e-16 Score=95.63 Aligned_cols=48 Identities=38% Similarity=1.182 Sum_probs=44.9
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLK 100 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~ 100 (190)
.|.+|++.++++.||.||.|+++||++|+.|++..+|+++|+|+.|..
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 588999887888999999999999999999999999999999999975
No 10
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=99.55 E-value=2.6e-15 Score=119.39 Aligned_cols=57 Identities=37% Similarity=1.066 Sum_probs=49.5
Q ss_pred CCCcccCCCCCCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCC-CccCccccc
Q psy11251 43 QYRWQCIECKCCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEG-SWSCQLCLK 100 (190)
Q Consensus 43 ~~~W~C~~C~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~-~W~C~~C~~ 100 (190)
...|+|..| .|.+|+...+++.||+||.|+++||++|+.||+..+|+| +|+|+.|..
T Consensus 167 ~~~w~C~~c-~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 167 DVNRLCRVC-ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp CTTSCCTTT-SCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC-
T ss_pred CcCEecCCC-CCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcC
Confidence 558999999 999999988899999999999999999999999999999 999999975
No 11
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.54 E-value=8.4e-15 Score=100.25 Aligned_cols=57 Identities=28% Similarity=0.723 Sum_probs=51.0
Q ss_pred CCCcccCCCCCCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCccccccc
Q psy11251 43 QYRWQCIECKCCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEF 102 (190)
Q Consensus 43 ~~~W~C~~C~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 102 (190)
...|.-.+-.+|.+|+. ++.||+||.|+++||++|+.||+..+|+|+|+|+.|....
T Consensus 17 ~~~~~d~n~~~C~vC~~---~g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~ 73 (88)
T 1fp0_A 17 EFGTLDDSATICRVCQK---PGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 73 (88)
T ss_dssp CCCSSSSSSSCCSSSCS---SSCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCC
T ss_pred cccccCCCCCcCcCcCC---CCCEEECCCCCCceecccCCCCCCCCcCCCcCCccccCCC
Confidence 56777777789999995 5789999999999999999999999999999999998653
No 12
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=99.51 E-value=1.5e-14 Score=92.97 Aligned_cols=47 Identities=40% Similarity=1.022 Sum_probs=42.4
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 102 (190)
+|.+|+. ++.||.||.|+++||++|+.|++..+|.++|+|+.|....
T Consensus 11 ~C~vC~~---~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 57 (61)
T 1mm2_A 11 FCRVCKD---GGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPA 57 (61)
T ss_dssp SCTTTCC---CSSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTC
T ss_pred cCCCCCC---CCCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCch
Confidence 5777874 6789999999999999999999999999999999998654
No 13
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=99.46 E-value=2.2e-14 Score=93.65 Aligned_cols=47 Identities=40% Similarity=1.140 Sum_probs=41.8
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 102 (190)
+|.+|+. ++.||.||.|+++||+.|+.||+..+|.++|+|+.|....
T Consensus 10 ~C~vC~~---~g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~~ 56 (66)
T 1xwh_A 10 ECAVCRD---GGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQAT 56 (66)
T ss_dssp SBSSSSC---CSSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHTC
T ss_pred CCccCCC---CCCEEEcCCCChhhcccccCCCcCcCCCCCeECccccCcc
Confidence 5677774 5789999999999999999999999999999999998643
No 14
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.46 E-value=2.9e-14 Score=90.06 Aligned_cols=45 Identities=51% Similarity=1.192 Sum_probs=40.7
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLK 100 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~ 100 (190)
+|.+|+. ++.||.||.|+++||+.|+.||+..+|.+.|+|+.|..
T Consensus 11 ~C~vC~~---~g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 11 FCSVCRK---SGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp SCSSSCC---SSCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCccCCC---CCeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 5777774 57899999999999999999999999999999999964
No 15
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=99.46 E-value=1.6e-14 Score=92.48 Aligned_cols=47 Identities=49% Similarity=1.165 Sum_probs=42.5
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 102 (190)
+|.+|+. ++.||.||.|+++||+.|+.||+..+|.+.|+|+.|....
T Consensus 7 ~C~vC~~---~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 53 (60)
T 2puy_A 7 FCSVCRK---SGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQM 53 (60)
T ss_dssp SCTTTCC---CSSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHHH
T ss_pred CCcCCCC---CCcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccChh
Confidence 6788885 5789999999999999999999999999999999998654
No 16
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=99.45 E-value=1.6e-14 Score=94.10 Aligned_cols=46 Identities=28% Similarity=0.790 Sum_probs=41.5
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCcccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKE 101 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~ 101 (190)
.|.+|+ +++.||+||.|+++||++|+.|++..+|+++|+|+.|...
T Consensus 14 ~C~vC~---~~~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~ 59 (66)
T 2lri_C 14 RCGVCG---DGTDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGD 59 (66)
T ss_dssp CCTTTS---CCTTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTC
T ss_pred CcCCCC---CCCeEEECCCCCCceecccCCCccCcCCCCCEECccccCC
Confidence 467777 4678999999999999999999999999999999999754
No 17
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.45 E-value=2.3e-14 Score=98.68 Aligned_cols=51 Identities=29% Similarity=0.782 Sum_probs=44.3
Q ss_pred CCCcCCCCCC--CCCccccCccCCcccCCCCCCCCCC----CCCCCccCcccccccc
Q psy11251 53 CCSVCGTSDN--DDQLLFCDDCDRGYHMYCLVPPIQT----PPEGSWSCQLCLKEFH 103 (190)
Q Consensus 53 ~C~~C~~~~~--~~~ll~C~~C~~~~H~~Cl~p~l~~----~p~~~W~C~~C~~~~~ 103 (190)
+|.+|+.... ++.||+||.|+++||++|+.||+.. +|++.|+|+.|.....
T Consensus 18 ~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~ 74 (88)
T 1wev_A 18 ACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMK 74 (88)
T ss_dssp SCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHC
T ss_pred cCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchhh
Confidence 7889987643 4789999999999999999999985 8999999999987543
No 18
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=99.45 E-value=3.2e-14 Score=91.36 Aligned_cols=47 Identities=47% Similarity=1.187 Sum_probs=42.3
Q ss_pred CCCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCcccccc
Q psy11251 52 KCCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKE 101 (190)
Q Consensus 52 ~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~ 101 (190)
.+|.+|+. ++.||.||.|+++||++|+.|++..+|+++|+|+.|...
T Consensus 12 ~~C~vC~~---~g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 12 DYCEVCQQ---GGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp SSCTTTSC---CSSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred CCCccCCC---CCcEEECCCCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 36778885 579999999999999999999999999999999999864
No 19
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=99.38 E-value=6.7e-14 Score=91.24 Aligned_cols=50 Identities=28% Similarity=0.937 Sum_probs=42.8
Q ss_pred CCCcCCCC--CCCCCccccCccCCcccCCCCCCCCCC--C-CCCCccCccccccc
Q psy11251 53 CCSVCGTS--DNDDQLLFCDDCDRGYHMYCLVPPIQT--P-PEGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~--~~~~~ll~C~~C~~~~H~~Cl~p~l~~--~-p~~~W~C~~C~~~~ 102 (190)
+|.+|+.. .+++.||+||.|+++||++|+.|++.. + |++.|+|+.|....
T Consensus 8 ~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~ 62 (66)
T 2yt5_A 8 VCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFAT 62 (66)
T ss_dssp CBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTT
T ss_pred CCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCcc
Confidence 68888865 345899999999999999999999877 4 88999999998653
No 20
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=99.33 E-value=9e-13 Score=102.38 Aligned_cols=47 Identities=36% Similarity=0.993 Sum_probs=42.8
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 102 (190)
+|.+|+ +++.+|+||.|+++||+.|+.|++..+|.|.|+|+.|....
T Consensus 6 ~C~~C~---~~g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 6 WCAVCQ---NGGELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLS 52 (184)
T ss_dssp SCTTTC---CCSSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred ccccCC---CCCeeeecCCCCcccCccccCCCCCCCCCCCEECccccCcc
Confidence 678888 46789999999999999999999999999999999998754
No 21
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=99.33 E-value=1.2e-12 Score=103.55 Aligned_cols=48 Identities=33% Similarity=0.931 Sum_probs=43.2
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCcccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEFH 103 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 103 (190)
+|.+|+. ++.+|+||.|+++||+.|+.|++..+|.|.|+|+.|.....
T Consensus 9 ~C~~C~~---~g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 56 (207)
T 3u5n_A 9 WCAVCQN---GGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGK 56 (207)
T ss_dssp SBTTTCC---CEEEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred CCCCCCC---CCceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCccc
Confidence 5778884 67899999999999999999999999999999999997654
No 22
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=99.32 E-value=1.6e-13 Score=90.57 Aligned_cols=48 Identities=40% Similarity=0.956 Sum_probs=41.6
Q ss_pred CCCcCCCCC--CCCCccccCccCCcccCCCCCCCCCCCCCCCccCccccccc
Q psy11251 53 CCSVCGTSD--NDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~--~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 102 (190)
.|.+|+..+ +++.||+||.|+++||++|++|+ .+|+|+|+|+.|....
T Consensus 18 ~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~--~vP~g~W~C~~C~~~~ 67 (71)
T 2ku3_A 18 VCSICMDGESQNSNVILFCDMCNLAVHQECYGVP--YIPEGQWLCRHCLQSR 67 (71)
T ss_dssp SCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCS--SCCSSCCCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCEEECCCCCCccccccCCCC--cCCCCCcCCccCcCcC
Confidence 678888664 66799999999999999999987 4899999999998643
No 23
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=99.30 E-value=3.5e-12 Score=99.55 Aligned_cols=48 Identities=33% Similarity=0.899 Sum_probs=43.5
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCcccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEFH 103 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 103 (190)
.|.+|+. ++.+|.||+|+++||+.|+.|++..+|.|+|+|+.|.....
T Consensus 4 ~C~~C~~---~g~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~~~ 51 (189)
T 2ro1_A 4 ICRVCQK---PGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPD 51 (189)
T ss_dssp CBTTTCC---CSSCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCSCC
T ss_pred cCccCCC---CCceeECCCCCchhccccCCCCcccCCCCCCCCcCccCCCC
Confidence 6889984 67899999999999999999999999999999999987643
No 24
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=99.23 E-value=1.4e-12 Score=87.09 Aligned_cols=50 Identities=32% Similarity=0.770 Sum_probs=43.8
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 102 (190)
+|.+|++..+++.||.||.|+.+||+.|+++++...|.+.|+|+.|....
T Consensus 20 ~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~ 69 (75)
T 2k16_A 20 ICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKI 69 (75)
T ss_dssp CBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHH
T ss_pred CCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCch
Confidence 56778887777789999999999999999998888888999999998653
No 25
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=99.22 E-value=7.1e-13 Score=91.12 Aligned_cols=48 Identities=40% Similarity=0.964 Sum_probs=41.1
Q ss_pred CCCcCCCCC--CCCCccccCccCCcccCCCCCCCCCCCCCCCccCccccccc
Q psy11251 53 CCSVCGTSD--NDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~--~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 102 (190)
.|.+|+..+ +++.||+||.|+.+||++|++|++ +|+|+|+|+.|....
T Consensus 27 ~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~--vP~g~W~C~~C~~~~ 76 (88)
T 2l43_A 27 VCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLCRHCLQSR 76 (88)
T ss_dssp CCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSS--CCSSCCCCHHHHHHT
T ss_pred cCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCc--cCCCceECccccCcc
Confidence 678888654 556999999999999999999874 899999999998653
No 26
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.10 E-value=7.4e-11 Score=80.61 Aligned_cols=48 Identities=25% Similarity=0.441 Sum_probs=39.4
Q ss_pred CCCCCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCCCCCcCC
Q psy11251 8 EKSGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECKCCSVCG 58 (190)
Q Consensus 8 ~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~~C~ 58 (190)
...+++|+||+||+|+++||+.|+.|+. ..+|++.|+|+.|......+
T Consensus 29 ~vC~~~g~LL~CD~C~~~fH~~Cl~PpL---~~~P~g~W~C~~C~~~~~~k 76 (88)
T 1fp0_A 29 RVCQKPGDLVMCNQCEFCFHLDCHLPAL---QDVPGEEWSCSLCHVLPDLK 76 (88)
T ss_dssp SSSCSSSCCEECTTSSCEECTTSSSTTC---CCCCSSSCCCCSCCCCCSSC
T ss_pred cCcCCCCCEEECCCCCCceecccCCCCC---CCCcCCCcCCccccCCCccc
Confidence 4455678999999999999999998765 46789999999997665544
No 27
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.10 E-value=1.8e-11 Score=75.53 Aligned_cols=40 Identities=30% Similarity=0.762 Sum_probs=34.3
Q ss_pred CCCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 10 SGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 10 ~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
.+++++||.||+|+++||+.|++++. ..+|.+.|+|+.|.
T Consensus 9 ~~~~~~ll~Cd~C~~~~H~~Cl~p~l---~~~P~g~W~C~~C~ 48 (51)
T 1f62_A 9 KGEDDKLILCDECNKAFHLFCLRPAL---YEVPDGEWQCPACQ 48 (51)
T ss_dssp SSCCSCCEECTTTCCEECHHHHCTTC---CSCCSSCCSCTTTS
T ss_pred CCCCCCEEECCCCChhhCcccCCCCc---CCCCCCcEECcCcc
Confidence 45678999999999999999998754 45788999999995
No 28
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=99.10 E-value=7.1e-11 Score=75.61 Aligned_cols=40 Identities=25% Similarity=0.585 Sum_probs=34.3
Q ss_pred CCCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 10 SGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 10 ~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
.+++|+||.||+|+++||+.|++++. ..+|.+.|+|+.|.
T Consensus 15 C~~~g~ll~Cd~C~~~fH~~Cl~ppl---~~~p~g~W~C~~C~ 54 (61)
T 1mm2_A 15 CKDGGELLCCDTCPSSYHIHCLNPPL---PEIPNGEWLCPRCT 54 (61)
T ss_dssp TCCCSSCBCCSSSCCCBCSSSSSSCC---SSCCSSCCCCTTTT
T ss_pred CCCCCCEEEcCCCCHHHcccccCCCc---CcCCCCccCChhhc
Confidence 45678999999999999999998754 45788999999994
No 29
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=99.10 E-value=2.5e-11 Score=78.92 Aligned_cols=42 Identities=21% Similarity=0.434 Sum_probs=35.6
Q ss_pred CCCCCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 8 EKSGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 8 ~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
...+++++||.||+|+++||++|++++. ..+|.+.|+|+.|.
T Consensus 16 ~vC~~~~~ll~Cd~C~~~~H~~Cl~P~l---~~~P~g~W~C~~C~ 57 (66)
T 2lri_C 16 GVCGDGTDVLRCTHCAAAFHWRCHFPAG---TSRPGTGLRCRSCS 57 (66)
T ss_dssp TTTSCCTTCEECSSSCCEECHHHHCTTT---CCCCSSSCCCTTTT
T ss_pred CCCCCCCeEEECCCCCCceecccCCCcc---CcCCCCCEECcccc
Confidence 3446788999999999999999998764 46789999999984
No 30
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=99.05 E-value=1e-10 Score=81.93 Aligned_cols=45 Identities=27% Similarity=0.721 Sum_probs=38.9
Q ss_pred cCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCcccccc
Q psy11251 56 VCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKE 101 (190)
Q Consensus 56 ~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~ 101 (190)
+|+...+++.||.||.|+++||+.|++|++..+|+ .|+|+.|...
T Consensus 32 iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~-~w~C~~C~~~ 76 (98)
T 2lv9_A 32 ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPD-TYLCERCQPR 76 (98)
T ss_dssp TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCS-SBCCTTTSSS
T ss_pred ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCC-CEECCCCcCC
Confidence 56666678899999999999999999999888875 8999999754
No 31
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=99.00 E-value=9e-11 Score=76.32 Aligned_cols=41 Identities=24% Similarity=0.597 Sum_probs=34.3
Q ss_pred CCCCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 9 KSGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 9 ~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
..+++|+||.||+|+++||+.|++++. ..+|.+.|+|+.|.
T Consensus 13 vC~~~g~ll~CD~C~~~fH~~Cl~ppl---~~~P~g~W~C~~C~ 53 (66)
T 1xwh_A 13 VCRDGGELICCDGCPRAFHLACLSPPL---REIPSGTWRCSSCL 53 (66)
T ss_dssp SSSCCSSCEECSSCCCEECTTTSSSCC---SSCCSSCCCCHHHH
T ss_pred cCCCCCCEEEcCCCChhhcccccCCCc---CcCCCCCeECcccc
Confidence 344678999999999999999998754 45778999999884
No 32
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=98.99 E-value=3.3e-10 Score=74.60 Aligned_cols=46 Identities=30% Similarity=0.874 Sum_probs=38.5
Q ss_pred CCCcCCCCCCCCCccccCc--cC-CcccCCCCCCCCCCCCCCCccCccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDD--CD-RGYHMYCLVPPIQTPPEGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~--C~-~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 102 (190)
+| +|++.. .+.||.||. |+ .+||+.|++ |..+|.+.|+|+.|....
T Consensus 18 ~C-~C~~~~-~g~MI~CD~~~C~~~wfH~~Cvg--l~~~p~g~w~Cp~C~~~~ 66 (71)
T 1wen_A 18 YC-LCHQVS-YGEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQES 66 (71)
T ss_dssp CS-TTCCCS-CSSEECCSCSSCSCCCEETTTTT--CSSCCSSCCCCTTTSSCS
T ss_pred EE-ECCCCC-CCCEeEeeCCCCCCccEecccCC--cCcCCCCCEECCCCCccc
Confidence 56 677764 368999999 77 699999999 788899999999998643
No 33
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.98 E-value=2.8e-10 Score=76.10 Aligned_cols=42 Identities=26% Similarity=0.543 Sum_probs=35.5
Q ss_pred CCCCCCCCceecCCCCCCCCCCCCCCCcccccccCCC-CcccCCCC
Q psy11251 8 EKSGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQY-RWQCIECK 52 (190)
Q Consensus 8 ~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~-~W~C~~C~ 52 (190)
+..+++++||.||+|+++||+.|++|+. ..+|.+ .|+|+.|.
T Consensus 33 ~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl---~~~P~g~~W~C~~C~ 75 (77)
T 2e6s_A 33 GGKHEPNMQLLCDECNVAYHIYCLNPPL---DKVPEEEYWYCPSCK 75 (77)
T ss_dssp CCCCCSTTEEECSSSCCEEETTSSSSCC---SSCCCSSCCCCTTTC
T ss_pred CCcCCCCCEEEcCCCCccccccccCCCc---cCCCCCCCcCCcCcc
Confidence 3445789999999999999999998765 457788 99999994
No 34
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=98.97 E-value=1.9e-10 Score=81.52 Aligned_cols=44 Identities=39% Similarity=1.098 Sum_probs=38.9
Q ss_pred CCCcCCCCCCCCCccccC--ccCCcccCCCCCCCCCCCCCCCccCcccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCD--DCDRGYHMYCLVPPIQTPPEGSWSCQLCLKE 101 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~--~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~ 101 (190)
+|.+|+ ++++||.|| .|+++||+.|++ |..+|+|.|+||.|...
T Consensus 17 ~C~~C~---~~G~ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~C~ 62 (107)
T 4gne_A 17 YCFQCG---DGGELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQCD 62 (107)
T ss_dssp SCTTTC---CCSEEEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGBCT
T ss_pred CCCcCC---CCCcEeEECCCCCCcccccccCc--CCcCCCCCEECCCCCCC
Confidence 577777 478999999 899999999999 89999999999988643
No 35
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=98.97 E-value=3.3e-11 Score=89.45 Aligned_cols=83 Identities=23% Similarity=0.579 Sum_probs=61.4
Q ss_pred CCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC-----------------CCCcCCCCCCCCCccccCccCCcc
Q psy11251 14 EDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK-----------------CCSVCGTSDNDDQLLFCDDCDRGY 76 (190)
Q Consensus 14 ~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~-----------------~C~~C~~~~~~~~ll~C~~C~~~~ 76 (190)
-+-+.|..|+.....+ +.. .+..-.--..|.|..|+ +|.+|+ +++.|+.||.|+++|
T Consensus 12 ~~~i~Ct~Cg~~~~~~--q~~-~~~~HPll~v~~C~~C~~~y~~~~~~~d~Dg~~d~C~vC~---~GG~LlcCD~Cpr~F 85 (142)
T 2lbm_A 12 HGIVSCTACGQQVNHF--QKD-SIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCA---EGGNLICCDFCHNAF 85 (142)
T ss_dssp CCCCBCTTTCSBSTTT--CSS-SEEEETTTTEEEEHHHHHHHHHSCCCBCTTSCBCSCSSSC---CCSSEEECSSSCCEE
T ss_pred cCCCEecCCCCccccc--ccc-chhcCCCccccccHHHHHHHhcCCceecCCCCCCeecccC---CCCcEEeCCCCCCee
Confidence 4678999999876421 100 01111113467788886 899999 588999999999999
Q ss_pred cCCCCCCCCCC-------CCCCCccCccccccc
Q psy11251 77 HMYCLVPPIQT-------PPEGSWSCQLCLKEF 102 (190)
Q Consensus 77 H~~Cl~p~l~~-------~p~~~W~C~~C~~~~ 102 (190)
|..|+.|++.. .|.++|.|+.|....
T Consensus 86 h~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~p 118 (142)
T 2lbm_A 86 CKKCILRNLGRKELSTIMDENNQWYCYICHPEP 118 (142)
T ss_dssp EHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCCT
T ss_pred eHhhcCCCCChhhhhhcccCCCCCEeecccCcc
Confidence 99999998862 488999999998643
No 36
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=98.97 E-value=1.8e-10 Score=75.78 Aligned_cols=42 Identities=29% Similarity=0.637 Sum_probs=35.6
Q ss_pred CCCCCCCCceecCCCCCCCCCCCCCCCcccccccCCC-CcccCCCC
Q psy11251 8 EKSGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQY-RWQCIECK 52 (190)
Q Consensus 8 ~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~-~W~C~~C~ 52 (190)
++.+++++||.||+|+++||++|++|+. ..+|++ .|+|+.|.
T Consensus 25 ~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl---~~~P~g~~W~C~~C~ 67 (70)
T 3asl_A 25 GGRQDPDKQLMCDECDMAFHIYCLDPPL---SSVPSEDEWYCPECR 67 (70)
T ss_dssp CCCSCGGGEEECTTTCCEEEGGGSSSCC---SSCCSSSCCCCTTTS
T ss_pred CCcCCCCCEEEcCCCCCceecccCCCCc---CCCCCCCCcCCcCcc
Confidence 4445789999999999999999998765 457788 99999995
No 37
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=98.97 E-value=1.2e-10 Score=74.25 Aligned_cols=41 Identities=24% Similarity=0.598 Sum_probs=34.1
Q ss_pred CCCCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 9 KSGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 9 ~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
..+++|+||.||+|+++||+.|++++. ..+|.+.|+|+.|.
T Consensus 10 vC~~~g~ll~Cd~C~~~fH~~Cl~ppl---~~~p~g~W~C~~C~ 50 (60)
T 2puy_A 10 VCRKSGQLLMCDTCSRVYHLDCLDPPL---KTIPKGMWICPRCQ 50 (60)
T ss_dssp TTCCCSSCEECSSSSCEECGGGSSSCC---SSCCCSCCCCHHHH
T ss_pred CCCCCCcEEEcCCCCcCEECCcCCCCc---CCCCCCceEChhcc
Confidence 344568999999999999999998754 45778999999883
No 38
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.97 E-value=1.5e-10 Score=72.81 Aligned_cols=40 Identities=25% Similarity=0.627 Sum_probs=33.4
Q ss_pred CCCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 10 SGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 10 ~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
.+++++||.||+|+++||+.|++++. ..+|.+.|+|+.|.
T Consensus 15 C~~~g~ll~Cd~C~~~~H~~Cl~ppl---~~~p~g~W~C~~C~ 54 (56)
T 2yql_A 15 CRKSGQLLMCDTCSRVYHLDCLDPPL---KTIPKGMWICPRCQ 54 (56)
T ss_dssp SCCSSCCEECSSSSCEECSSSSSSCC---CSCCCSSCCCHHHH
T ss_pred CCCCCeEEEcCCCCcceECccCCCCc---CCCCCCceEChhhh
Confidence 34467999999999999999998754 45778999999883
No 39
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=98.96 E-value=9.9e-11 Score=74.94 Aligned_cols=40 Identities=25% Similarity=0.651 Sum_probs=34.0
Q ss_pred CCCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 10 SGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 10 ~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
.+++++||.||+|+++||+.|++++. ..+|.+.|+|+.|.
T Consensus 17 C~~~g~ll~CD~C~~~fH~~Cl~p~l---~~~p~g~W~C~~C~ 56 (61)
T 2l5u_A 17 CQQGGEIILCDTCPRAYHMVCLDPDM---EKAPEGKWSCPHCE 56 (61)
T ss_dssp TSCCSSEEECSSSSCEEEHHHHCTTC---CSCCCSSCCCTTGG
T ss_pred CCCCCcEEECCCCChhhhhhccCCCC---CCCCCCceECcccc
Confidence 34578999999999999999998764 35778999999985
No 40
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.91 E-value=1.1e-09 Score=75.43 Aligned_cols=46 Identities=30% Similarity=0.874 Sum_probs=38.3
Q ss_pred CCCcCCCCCCCCCccccCc--cC-CcccCCCCCCCCCCCCCCCccCccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDD--CD-RGYHMYCLVPPIQTPPEGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~--C~-~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 102 (190)
+| +|++.. .+.||.||. |+ .|||+.|++ |...|.+.|+|+.|....
T Consensus 38 yC-iC~~~~-~g~MI~CD~~dC~~~WfH~~CVg--l~~~p~g~W~Cp~C~~~~ 86 (91)
T 1weu_A 38 YC-LCHQVS-YGEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQES 86 (91)
T ss_dssp CS-TTCCBC-CSCCCCCSCSSCSCCCCCSTTTT--CSSCCCSSCCCTTTCCCC
T ss_pred EE-ECCCCC-CCCEeEecCCCCCCCCEecccCC--cCcCCCCCEECcCccCcC
Confidence 56 777654 468999999 76 799999999 788889999999998643
No 41
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=98.90 E-value=2.1e-10 Score=73.17 Aligned_cols=44 Identities=30% Similarity=0.908 Sum_probs=37.1
Q ss_pred CCCcCCCCCCCCCccccCc--cC-CcccCCCCCCCCCCCCCCCccCccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDD--CD-RGYHMYCLVPPIQTPPEGSWSCQLCLK 100 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~--C~-~~~H~~Cl~p~l~~~p~~~W~C~~C~~ 100 (190)
+| +|++.. .+.||.||. |+ .+||+.|++ |..+|.+.|+|+.|..
T Consensus 12 ~C-~C~~~~-~g~mi~CD~cdC~~~wfH~~Cvg--l~~~p~g~w~C~~C~~ 58 (60)
T 2vnf_A 12 YC-LCHQVS-YGEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQ 58 (60)
T ss_dssp ET-TTTEEC-CSEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred EE-ECCCcC-CCCEEEeCCCCCCCceEehhcCC--CCcCCCCCEECcCccC
Confidence 45 677664 478999999 55 899999999 8888999999999975
No 42
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=98.90 E-value=5.6e-10 Score=76.67 Aligned_cols=44 Identities=25% Similarity=0.782 Sum_probs=36.7
Q ss_pred CCCcCCCCCCCCCccccCccC---CcccCCCCCCCCCCCCCCCccCcc-ccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCD---RGYHMYCLVPPIQTPPEGSWSCQL-CLK 100 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~---~~~H~~Cl~p~l~~~p~~~W~C~~-C~~ 100 (190)
+| +|++... +.||.||.|+ .|||+.|++ |...|.+.|+|+. |..
T Consensus 28 yC-iC~~~~~-g~MI~CD~c~C~~eWfH~~CVg--l~~~p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 28 YC-FCRNVSY-GPMVACDNPACPFEWFHYGCVG--LKQAPKGKWYCSKDCKE 75 (90)
T ss_dssp CS-TTTCCCS-SSEECCCSSSCSCSCEETTTSS--CSSCTTSCCCSSHHHHH
T ss_pred EE-EeCCCCC-CCEEEecCCCCccccCcCccCC--CCcCCCCCccCChhhcc
Confidence 45 6776544 5799999977 899999999 7888899999999 974
No 43
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=98.89 E-value=2.6e-10 Score=72.50 Aligned_cols=44 Identities=30% Similarity=0.937 Sum_probs=37.2
Q ss_pred CCCcCCCCCCCCCccccCc--cC-CcccCCCCCCCCCCCCCCCccCccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDD--CD-RGYHMYCLVPPIQTPPEGSWSCQLCLK 100 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~--C~-~~~H~~Cl~p~l~~~p~~~W~C~~C~~ 100 (190)
+| +|++.. .+.||.||. |+ .+||+.|++ +...|.+.|+|+.|..
T Consensus 11 yC-~C~~~~-~g~mi~CD~~~C~~~wfH~~Cvg--l~~~p~~~w~Cp~C~~ 57 (59)
T 3c6w_A 11 YC-LCHQVS-YGEMIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCVQ 57 (59)
T ss_dssp ET-TTTEEC-CSEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred EE-ECCCCC-CCCeeEeeCCCCCCCCEecccCC--cccCCCCCEECcCccC
Confidence 45 677654 468999999 77 699999999 8888999999999975
No 44
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.88 E-value=1.4e-09 Score=77.57 Aligned_cols=49 Identities=27% Similarity=0.701 Sum_probs=42.9
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCcccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKE 101 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~ 101 (190)
+|.+|+..++.+.||.|+.|+++||+.|+.+++..++.+.|+|+.|...
T Consensus 9 ~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~~C 57 (111)
T 2ysm_A 9 NCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECKVC 57 (111)
T ss_dssp CBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTCCC
T ss_pred CCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccccccCccCCcCCcc
Confidence 6889998766667899999999999999999888788899999998643
No 45
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=98.86 E-value=8.9e-10 Score=73.62 Aligned_cols=42 Identities=29% Similarity=0.631 Sum_probs=35.4
Q ss_pred CCCCCCCCceecCCCCCCCCCCCCCCCcccccccCCCC-cccCCCC
Q psy11251 8 EKSGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYR-WQCIECK 52 (190)
Q Consensus 8 ~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~-W~C~~C~ 52 (190)
++.++.+.||.||.|+++||++|++++. ..+|.+. |+|+.|+
T Consensus 33 ~~~~d~~~ll~CD~C~~~yH~~Cl~PpL---~~~P~g~~W~C~~C~ 75 (77)
T 3shb_A 33 GGRQDPDKQLMCDECDMAFHIYCLDPPL---SSVPSEDEWYCPECR 75 (77)
T ss_dssp CCCSCGGGEEECTTTCCEEETTTSSSCC---SSCCSSSCCCCTTTC
T ss_pred CCCCCCcceeEeCCCCCccCcccCCCcc---cCCCCCCceECcCcc
Confidence 4455778999999999999999998765 4577888 9999995
No 46
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.84 E-value=4.8e-10 Score=72.72 Aligned_cols=51 Identities=27% Similarity=0.662 Sum_probs=37.0
Q ss_pred CCCCccCC-CCCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 2 LCPTQAEK-SGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 2 ~C~~~~~~-~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
+|..+... ..+.+.||.||+|+++||+.|++++.......|++.|+|+.|.
T Consensus 8 ~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~ 59 (66)
T 2yt5_A 8 VCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCV 59 (66)
T ss_dssp CBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHH
T ss_pred CCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCc
Confidence 34444432 3456999999999999999999875432111278999999884
No 47
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.82 E-value=4.6e-10 Score=77.64 Aligned_cols=39 Identities=23% Similarity=0.575 Sum_probs=33.5
Q ss_pred CCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 11 GQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 11 g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
++.+.||.||+|+++||+.|++|+. ..+|.+.|+|+.|.
T Consensus 26 ~~~~~ll~CD~C~~~~H~~Cl~Ppl---~~~P~g~W~C~~C~ 64 (92)
T 2e6r_A 26 DEDDKLLFCDGCDDNYHIFCLLPPL---PEIPRGIWRCPKCI 64 (92)
T ss_dssp GGGGGCEECTTTCCEECSSSSSSCC---SSCCSSCCCCHHHH
T ss_pred CCCCCEEEcCCCCchhccccCCCCc---ccCCCCCcCCccCc
Confidence 3567899999999999999998765 46789999999994
No 48
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.82 E-value=2.3e-09 Score=76.73 Aligned_cols=47 Identities=19% Similarity=0.591 Sum_probs=37.0
Q ss_pred CCCccCCCCCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 3 CPTQAEKSGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 3 C~~~~~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
|........+.++||.||.|+++||++|++++. ..+|++.|+|+.|+
T Consensus 64 C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l---~~~P~~~W~C~~C~ 110 (112)
T 3v43_A 64 CSSCRDQGKNADNMLFCDSCDRGFHMECCDPPL---TRMPKGMWICQICR 110 (112)
T ss_dssp BTTTCCCCCTTCCCEECTTTCCEECGGGCSSCC---SSCCSSCCCCTTTS
T ss_pred cccccCcCCCccceEEcCCCCCeeecccCCCCC---CCCCCCCeECCCCC
Confidence 444443334567999999999999999998754 46789999999995
No 49
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=98.81 E-value=6.2e-10 Score=71.38 Aligned_cols=45 Identities=27% Similarity=0.892 Sum_probs=36.9
Q ss_pred CCCcCCCCCCCCCccccCc--cC-CcccCCCCCCCCCCCCCCCccCcccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDD--CD-RGYHMYCLVPPIQTPPEGSWSCQLCLKE 101 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~--C~-~~~H~~Cl~p~l~~~p~~~W~C~~C~~~ 101 (190)
+| +|++.. .+.||.||. |+ .+||+.|++ |...|.+.|+|+.|...
T Consensus 13 yC-~C~~~~-~g~MI~CD~c~C~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~~ 60 (62)
T 2g6q_A 13 YC-LCNQVS-YGEMIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRGD 60 (62)
T ss_dssp ET-TTTEEC-CSEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHTC
T ss_pred EE-ECCCCC-CCCeeeeeCCCCCcccEecccCC--cCcCCCCCEECcCcccC
Confidence 45 677654 468999999 55 999999999 77788999999999753
No 50
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=98.81 E-value=4.3e-10 Score=74.05 Aligned_cols=46 Identities=20% Similarity=0.565 Sum_probs=36.2
Q ss_pred CCCCccCC-CCCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 2 LCPTQAEK-SGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 2 ~C~~~~~~-~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
+|..+... +.+.++||.||+|+++||..|++++ .+|+++|+|+.|.
T Consensus 18 ~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~-----~vP~g~W~C~~C~ 64 (71)
T 2ku3_A 18 VCSICMDGESQNSNVILFCDMCNLAVHQECYGVP-----YIPEGQWLCRHCL 64 (71)
T ss_dssp SCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCS-----SCCSSCCCCHHHH
T ss_pred CCCCCCCCCCCCCCCEEECCCCCCccccccCCCC-----cCCCCCcCCccCc
Confidence 34444432 3477899999999999999999874 3788999999883
No 51
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=98.81 E-value=2.2e-09 Score=83.12 Aligned_cols=42 Identities=21% Similarity=0.496 Sum_probs=35.5
Q ss_pred CCCCCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 8 EKSGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 8 ~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
...+++|+||+||+|+++||..|+.++. ..+|.+.|+|+.|.
T Consensus 8 ~~C~~~g~ll~Cd~C~~~~H~~C~~p~l---~~~p~~~W~C~~C~ 49 (184)
T 3o36_A 8 AVCQNGGELLCCEKCPKVFHLSCHVPTL---TNFPSGEWICTFCR 49 (184)
T ss_dssp TTTCCCSSCEECSSSSCEECTTTSSSCC---SSCCSSCCCCTTTS
T ss_pred ccCCCCCeeeecCCCCcccCccccCCCC---CCCCCCCEECcccc
Confidence 3456788999999999999999998765 46788999999885
No 52
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.79 E-value=1.4e-09 Score=74.65 Aligned_cols=51 Identities=24% Similarity=0.509 Sum_probs=38.2
Q ss_pred CCCCccCCCC-CCCCceecCCCCCCCCCCCCCCCcccc-cccCCCCcccCCCC
Q psy11251 2 LCPTQAEKSG-QPEDLVSCSDCGRSGHPTCLQFTNNMK-VSVKQYRWQCIECK 52 (190)
Q Consensus 2 ~C~~~~~~~g-~~~~ll~C~~C~~~~H~~Cl~~~~~~~-~~~~~~~W~C~~C~ 52 (190)
+|..+..... ..+.||.||.|+++||+.|++|+.... ..+|.+.|+|+.|.
T Consensus 18 ~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~ 70 (88)
T 1wev_A 18 ACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCT 70 (88)
T ss_dssp SCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHH
T ss_pred cCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCcccc
Confidence 4555554432 358999999999999999998765321 14789999999985
No 53
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=98.78 E-value=3.8e-09 Score=82.22 Aligned_cols=43 Identities=28% Similarity=0.546 Sum_probs=36.2
Q ss_pred cCCCCCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 7 AEKSGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 7 ~~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
+...+++|+||+||+|+++||..|+.++. ..+|.+.|+|+.|.
T Consensus 5 C~~C~~~g~ll~Cd~C~~~~H~~Cl~p~l---~~~p~g~W~C~~C~ 47 (189)
T 2ro1_A 5 CRVCQKPGDLVMCNQCEFCFHLDCHLPAL---QDVPGEEWSCSLCH 47 (189)
T ss_dssp BTTTCCCSSCCCCTTTCCBCCSTTSTTCC---SSCCCTTCCTTTTS
T ss_pred CccCCCCCceeECCCCCchhccccCCCCc---ccCCCCCCCCcCcc
Confidence 34556788999999999999999998755 46789999999995
No 54
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=98.77 E-value=2.4e-09 Score=84.46 Aligned_cols=42 Identities=29% Similarity=0.539 Sum_probs=35.8
Q ss_pred CCCCCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 8 EKSGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 8 ~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
...+++|+||+||+|+++||..|+.|+. ..+|.+.|+|+.|.
T Consensus 11 ~~C~~~g~ll~Cd~C~~~~H~~Cl~p~l---~~~p~~~W~C~~C~ 52 (207)
T 3u5n_A 11 AVCQNGGDLLCCEKCPKVFHLTCHVPTL---LSFPSGDWICTFCR 52 (207)
T ss_dssp TTTCCCEEEEECSSSSCEECTTTSSSCC---SSCCSSCCCCTTTS
T ss_pred CCCCCCCceEEcCCCCCccCCccCCCCC---CCCCCCCEEeCcee
Confidence 4456788999999999999999998755 45789999999996
No 55
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=98.72 E-value=1.4e-09 Score=74.57 Aligned_cols=37 Identities=19% Similarity=0.578 Sum_probs=31.9
Q ss_pred CCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 11 GQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 11 g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
.+.++||.||+|+++||+.|++++ .+|++.|+|+.|.
T Consensus 37 ~~~~~ll~CD~C~~~fH~~Cl~p~-----~vP~g~W~C~~C~ 73 (88)
T 2l43_A 37 QNSNVILFCDMCNLAVHQECYGVP-----YIPEGQWLCRHCL 73 (88)
T ss_dssp CSEEEEEECSSSCCCCCHHHHTCS-----SCCSSCCCCHHHH
T ss_pred CCCCCEEECCCCCchhhcccCCCC-----ccCCCceECcccc
Confidence 356699999999999999999874 3788999999883
No 56
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=98.68 E-value=4.1e-09 Score=70.03 Aligned_cols=39 Identities=21% Similarity=0.639 Sum_probs=32.1
Q ss_pred CCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 11 GQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 11 g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
.+++.||.||.|.++||..|++++.. .++.+.|+|+.|.
T Consensus 28 ~~~~~mi~CD~C~~wfH~~Cv~~~~~---~~~~~~w~C~~C~ 66 (75)
T 2k16_A 28 DDGSPMIGCDDCDDWYHWPCVGIMAA---PPEEMQWFCPKCA 66 (75)
T ss_dssp CSSCCEEECSSSSSEEEHHHHTCSSC---CCSSSCCCCTTTH
T ss_pred CCCCCEEEcCCCCcccccccCCCCcc---CCCCCCEEChhcc
Confidence 46778999999999999999998652 3446899999984
No 57
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.67 E-value=4.2e-09 Score=75.58 Aligned_cols=42 Identities=29% Similarity=0.580 Sum_probs=35.2
Q ss_pred CCCCCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 8 EKSGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 8 ~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
+..+++++||.||+|+++||+.|++++. ..+|.+.|+|+.|.
T Consensus 65 ~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl---~~~P~g~W~C~~C~ 106 (114)
T 2kwj_A 65 GTSENDDQLLFCDDCDRGYHMYCLNPPV---AEPPEGSWSCHLCW 106 (114)
T ss_dssp TCCTTTTTEEECSSSCCEEETTTSSSCC---SSCCSSCCCCHHHH
T ss_pred cccCCCCceEEcCCCCccccccccCCCc---cCCCCCCeECcccc
Confidence 3445689999999999999999998754 46789999999873
No 58
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=98.67 E-value=1.1e-08 Score=66.65 Aligned_cols=46 Identities=22% Similarity=0.570 Sum_probs=38.1
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLK 100 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~ 100 (190)
+| +|++..+++.||.||.|..|||..|++.....+| +.|+|+.|..
T Consensus 21 ~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~-~~~~C~~C~~ 66 (68)
T 3o70_A 21 TC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVP-EVFVCQKCRD 66 (68)
T ss_dssp CS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCC-SSCCCHHHHT
T ss_pred Ee-ECCCcCCCCCEEECCCCCccccccccCcCcccCC-CcEECCCCCC
Confidence 55 7888777778999999999999999997644444 6999999974
No 59
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.65 E-value=3.5e-09 Score=69.48 Aligned_cols=43 Identities=26% Similarity=0.742 Sum_probs=35.6
Q ss_pred CCCCCCCCCccccCccC---CcccCCCCCCCCCCCCCCCccCccccccc
Q psy11251 57 CGTSDNDDQLLFCDDCD---RGYHMYCLVPPIQTPPEGSWSCQLCLKEF 102 (190)
Q Consensus 57 C~~~~~~~~ll~C~~C~---~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 102 (190)
|++.. .+.||.||.|+ .+||+.|++ |...|.+.|+|+.|....
T Consensus 11 C~~~~-~g~MI~CD~cdC~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~~~ 56 (70)
T 1x4i_A 11 CNQVS-YGEMVGCDNQDCPIEWFHYGCVG--LTEAPKGKWYCPQCTAAM 56 (70)
T ss_dssp TSCCC-CSSEECCSCTTCSCCCEEHHHHT--CSSCCSSCCCCHHHHHHH
T ss_pred cCCCC-CCCEeEeCCCCCCccCCcccccc--cCcCCCCCEECCCCCccc
Confidence 56553 45899999986 899999999 677788999999998654
No 60
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=98.59 E-value=2.8e-08 Score=65.33 Aligned_cols=35 Identities=20% Similarity=0.687 Sum_probs=29.4
Q ss_pred CCCceecCC--CC-CCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 13 PEDLVSCSD--CG-RSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 13 ~~~ll~C~~--C~-~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
.|+||.||+ |+ .+||+.|+++ ..+|.+.|+|+.|.
T Consensus 26 ~g~MI~CD~~~C~~~wfH~~Cvgl-----~~~p~g~w~Cp~C~ 63 (71)
T 1wen_A 26 YGEMIGCDNPDCSIEWFHFACVGL-----TTKPRGKWFCPRCS 63 (71)
T ss_dssp CSSEECCSCSSCSCCCEETTTTTC-----SSCCSSCCCCTTTS
T ss_pred CCCEeEeeCCCCCCccEecccCCc-----CcCCCCCEECCCCC
Confidence 368999999 88 7999999986 34567899999984
No 61
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.58 E-value=1.8e-08 Score=64.77 Aligned_cols=50 Identities=24% Similarity=0.556 Sum_probs=37.9
Q ss_pred CCCcCCCCCC-CCCccccCccCCcccCCCCCCCCCCCC-CCCccCccccccc
Q psy11251 53 CCSVCGTSDN-DDQLLFCDDCDRGYHMYCLVPPIQTPP-EGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~~-~~~ll~C~~C~~~~H~~Cl~p~l~~~p-~~~W~C~~C~~~~ 102 (190)
+|.+|++..+ ++.||.||.|+.+||..|++....... ...|+|+.|..+.
T Consensus 8 ~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k~ 59 (64)
T 1we9_A 8 QCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKS 59 (64)
T ss_dssp CCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTT
T ss_pred CCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCcC
Confidence 4557777653 578999999999999999995433322 2689999998754
No 62
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=98.56 E-value=2.8e-08 Score=69.36 Aligned_cols=42 Identities=14% Similarity=0.459 Sum_probs=33.5
Q ss_pred cCCCCCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 7 AEKSGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 7 ~~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
++...+++.||.|+.|.++||..|++++. ..+| ..|+|+.|+
T Consensus 33 C~~~~~~~~mi~Cd~C~~w~H~~C~~~~~---~~~p-~~w~C~~C~ 74 (98)
T 2lv9_A 33 CGFTHDDGYMICCDKCSVWQHIDCMGIDR---QHIP-DTYLCERCQ 74 (98)
T ss_dssp TSCCSCSSCEEEBTTTCBEEETTTTTCCT---TSCC-SSBCCTTTS
T ss_pred CCCccCCCcEEEcCCCCCcCcCcCCCCCc---cCCC-CCEECCCCc
Confidence 34556788999999999999999998764 3344 479999884
No 63
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.56 E-value=6.1e-08 Score=66.61 Aligned_cols=35 Identities=23% Similarity=0.710 Sum_probs=29.3
Q ss_pred CCCceecCC--CC-CCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 13 PEDLVSCSD--CG-RSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 13 ~~~ll~C~~--C~-~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
.|+||.||. |+ .+||+.|+++. .+|.+.|+|+.|.
T Consensus 46 ~g~MI~CD~~dC~~~WfH~~CVgl~-----~~p~g~W~Cp~C~ 83 (91)
T 1weu_A 46 YGEMIGCDNPDCSIEWFHFACVGLT-----TKPRGKWFCPRCS 83 (91)
T ss_dssp CSCCCCCSCSSCSCCCCCSTTTTCS-----SCCCSSCCCTTTC
T ss_pred CCCEeEecCCCCCCCCEecccCCcC-----cCCCCCEECcCcc
Confidence 368999999 87 79999999863 4567899999984
No 64
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=98.51 E-value=8.5e-09 Score=76.45 Aligned_cols=46 Identities=15% Similarity=0.397 Sum_probs=36.2
Q ss_pred cCCCCCCCCceecCCCCCCCCCCCCCCCccc--ccc--cCCCCcccCCCC
Q psy11251 7 AEKSGQPEDLVSCSDCGRSGHPTCLQFTNNM--KVS--VKQYRWQCIECK 52 (190)
Q Consensus 7 ~~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~--~~~--~~~~~W~C~~C~ 52 (190)
+...++||+||+||+|+++||..|+.++... ... .+.+.|+|+.|.
T Consensus 66 C~vC~~GG~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~ 115 (142)
T 2lbm_A 66 CRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICH 115 (142)
T ss_dssp CSSSCCCSSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTC
T ss_pred ecccCCCCcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeeccc
Confidence 3556899999999999999999999765431 122 478999999884
No 65
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.49 E-value=5e-08 Score=64.23 Aligned_cols=48 Identities=29% Similarity=0.655 Sum_probs=36.9
Q ss_pred CCCcCCCCCCC-CCccccCccCCcccCCCCCCCCCCCCCCCccCcccccc
Q psy11251 53 CCSVCGTSDND-DQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKE 101 (190)
Q Consensus 53 ~C~~C~~~~~~-~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~ 101 (190)
+| +|++..+. ..||.||.|..|||..|++..........|+|+.|...
T Consensus 18 ~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~ 66 (72)
T 1wee_A 18 DC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIEL 66 (72)
T ss_dssp CC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHH
T ss_pred Ee-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCC
Confidence 45 57877544 47999999999999999996533333479999999864
No 66
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=98.47 E-value=1.6e-08 Score=64.17 Aligned_cols=35 Identities=23% Similarity=0.692 Sum_probs=29.2
Q ss_pred CCCceecCC--CC-CCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 13 PEDLVSCSD--CG-RSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 13 ~~~ll~C~~--C~-~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
+|+||.||+ |+ .+||+.|+++. .+|.+.|+|+.|.
T Consensus 19 ~g~mi~CD~~~C~~~wfH~~Cvgl~-----~~p~~~w~Cp~C~ 56 (59)
T 3c6w_A 19 YGEMIGCDNPDCPIEWFHFACVDLT-----TKPKGKWFCPRCV 56 (59)
T ss_dssp CSEEEECSCTTCSSCEEETGGGTCS-----SCCSSCCCCHHHH
T ss_pred CCCeeEeeCCCCCCCCEecccCCcc-----cCCCCCEECcCcc
Confidence 468999999 88 69999999863 4567899999883
No 67
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=98.46 E-value=5e-08 Score=68.91 Aligned_cols=48 Identities=27% Similarity=0.825 Sum_probs=38.0
Q ss_pred CCCcCCCCC-CCCCccccC-ccCCcccCCCCCCCCCC--------CCCCCccCccccccc
Q psy11251 53 CCSVCGTSD-NDDQLLFCD-DCDRGYHMYCLVPPIQT--------PPEGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~-~~~~ll~C~-~C~~~~H~~Cl~p~l~~--------~p~~~W~C~~C~~~~ 102 (190)
.|.+|++.. +.+.++.|| .|+.|||..|++ |+. .|.+.|+|+.|....
T Consensus 5 ~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVg--lt~~~~~~i~~~~~~~~~Cp~C~~~~ 62 (105)
T 2xb1_A 5 PCGACRSEVNDDQDAILCEASCQKWFHRECTG--MTESAYGLLTTEASAVWACDLCLKTK 62 (105)
T ss_dssp BCTTTCSBCCTTSCEEECTTTTCCEEEGGGTT--CCHHHHHHHHHCTTEEECCHHHHHTT
T ss_pred CCCCCCCccCCCCCEEEecCCcccccccccCC--cCHHHHHhhccCCCCCEECccccCcC
Confidence 567788763 456799998 999999999999 443 466899999998754
No 68
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=98.45 E-value=5.1e-08 Score=60.14 Aligned_cols=44 Identities=20% Similarity=0.513 Sum_probs=36.2
Q ss_pred cCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCccccc
Q psy11251 56 VCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLK 100 (190)
Q Consensus 56 ~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~ 100 (190)
+|++..+++.||.||.|..+||..|++.....+| +.|+|+.|..
T Consensus 8 ~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~~~~~~-~~~~C~~C~~ 51 (52)
T 3o7a_A 8 FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVP-EVFVCQKCRD 51 (52)
T ss_dssp TTCCBCTTCCEEECTTTCCEEETTTTTCCGGGCC-SSCCCHHHHT
T ss_pred EeCCcCCCCCEEEcCCCCccccccccCCCcccCC-CcEECcCCCC
Confidence 6788777779999999999999999996543333 6999999963
No 69
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=98.44 E-value=2.2e-08 Score=63.70 Aligned_cols=35 Identities=20% Similarity=0.687 Sum_probs=29.2
Q ss_pred CCCceecCC--CC-CCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 13 PEDLVSCSD--CG-RSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 13 ~~~ll~C~~--C~-~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
.|+||.||+ |+ .+||+.|+++ ..+|.+.|+|+.|.
T Consensus 20 ~g~mi~CD~cdC~~~wfH~~Cvgl-----~~~p~g~w~C~~C~ 57 (60)
T 2vnf_A 20 YGEMIGCDNPDCSIEWFHFACVGL-----TTKPRGKWFCPRCS 57 (60)
T ss_dssp CSEEEECSCTTCSSCEEETGGGTC-----SSCCSSCCCCHHHH
T ss_pred CCCEEEeCCCCCCCceEehhcCCC-----CcCCCCCEECcCcc
Confidence 478999999 77 8999999986 34667899999884
No 70
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=98.43 E-value=2.3e-08 Score=63.96 Aligned_cols=35 Identities=23% Similarity=0.720 Sum_probs=29.1
Q ss_pred CCCceecCC--CC-CCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 13 PEDLVSCSD--CG-RSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 13 ~~~ll~C~~--C~-~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
.|+||.||+ |+ ++||+.|+++. .+|.+.|+|+.|.
T Consensus 21 ~g~MI~CD~c~C~~~WfH~~Cvgl~-----~~p~~~w~Cp~C~ 58 (62)
T 2g6q_A 21 YGEMIGCDNEQCPIEWFHFSCVSLT-----YKPKGKWYCPKCR 58 (62)
T ss_dssp CSEEEECSCTTCSSCEEETGGGTCS-----SCCSSCCCCHHHH
T ss_pred CCCeeeeeCCCCCcccEecccCCcC-----cCCCCCEECcCcc
Confidence 468999999 66 99999999874 3467899999884
No 71
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=98.41 E-value=7.3e-09 Score=75.60 Aligned_cols=47 Identities=26% Similarity=0.720 Sum_probs=40.5
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCC-----CC--CCCCccCccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQ-----TP--PEGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~-----~~--p~~~W~C~~C~~~~ 102 (190)
+|.+|+ ++++++.||.|+++||..|+.|++. ++ |.++|+|..|....
T Consensus 59 ~C~vC~---dGG~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~p 112 (129)
T 3ql9_A 59 QCRWCA---EGGNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPEP 112 (129)
T ss_dssp SCTTTC---CCSEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCGG
T ss_pred cCeecC---CCCeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCHH
Confidence 788998 5899999999999999999998743 33 78999999997654
No 72
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=98.37 E-value=9.8e-08 Score=65.42 Aligned_cols=35 Identities=23% Similarity=0.576 Sum_probs=28.6
Q ss_pred CCCceecCCCC---CCCCCCCCCCCcccccccCCCCcccCC-CC
Q psy11251 13 PEDLVSCSDCG---RSGHPTCLQFTNNMKVSVKQYRWQCIE-CK 52 (190)
Q Consensus 13 ~~~ll~C~~C~---~~~H~~Cl~~~~~~~~~~~~~~W~C~~-C~ 52 (190)
.|+||.||+|. .+||+.|+++. .+|.+.|+|+. |.
T Consensus 36 ~g~MI~CD~c~C~~eWfH~~CVgl~-----~~p~~~W~Cp~cC~ 74 (90)
T 2jmi_A 36 YGPMVACDNPACPFEWFHYGCVGLK-----QAPKGKWYCSKDCK 74 (90)
T ss_dssp SSSEECCCSSSCSCSCEETTTSSCS-----SCTTSCCCSSHHHH
T ss_pred CCCEEEecCCCCccccCcCccCCCC-----cCCCCCccCChhhc
Confidence 35799999965 89999999873 35678999998 74
No 73
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=98.37 E-value=1.8e-07 Score=57.62 Aligned_cols=47 Identities=21% Similarity=0.481 Sum_probs=35.3
Q ss_pred CCCccCCCCCCCCceecC-CCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 3 CPTQAEKSGQPEDLVSCS-DCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 3 C~~~~~~~g~~~~ll~C~-~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
|.......++++.||.|| .|..+||..|+++...... ...|+|+.|+
T Consensus 5 cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~---~~~~~C~~C~ 52 (52)
T 2kgg_A 5 AQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAE---NEDYICINCA 52 (52)
T ss_dssp CTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHH---HSCCCCSCC-
T ss_pred CCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccC---CCCEECCCCC
Confidence 344445556788999999 8999999999998654322 3689999984
No 74
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=98.36 E-value=1.6e-07 Score=61.16 Aligned_cols=46 Identities=22% Similarity=0.628 Sum_probs=34.4
Q ss_pred cCCCCCCCCCccccC--ccCCcccCCCCCCCCCCC----CCCCccCcccccc
Q psy11251 56 VCGTSDNDDQLLFCD--DCDRGYHMYCLVPPIQTP----PEGSWSCQLCLKE 101 (190)
Q Consensus 56 ~C~~~~~~~~ll~C~--~C~~~~H~~Cl~p~l~~~----p~~~W~C~~C~~~ 101 (190)
+|+...+.+.||.|| .|..|||..|++-..... ....|+|+.|+..
T Consensus 14 ~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~~ 65 (68)
T 2rsd_A 14 ICSSTMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRLS 65 (68)
T ss_dssp TTCCCSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHHH
T ss_pred ECCCCcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccCc
Confidence 678777788999999 499999999998321111 1147999999753
No 75
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.36 E-value=6.4e-08 Score=64.72 Aligned_cols=47 Identities=30% Similarity=0.736 Sum_probs=37.8
Q ss_pred CCCcCCCCCCCCCccccC--ccCCcccCCCCCCCCCCCC-------CCCccCccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCD--DCDRGYHMYCLVPPIQTPP-------EGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~--~C~~~~H~~Cl~p~l~~~p-------~~~W~C~~C~~~~ 102 (190)
+| +|++..+.+.||.|| .|..|||..|++- ...+ ...|+|+.|....
T Consensus 18 ~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi--~~~~~~~~~~~~~~~~C~~C~~~~ 73 (78)
T 1wew_A 18 RC-VCGNSLETDSMIQCEDPRCHVWQHVGCVIL--PDKPMDGNPPLPESFYCEICRLTS 73 (78)
T ss_dssp CC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSC--CCTTTCSCSCSCSSCCCHHHHHCC
T ss_pred Ee-ECCCcCCCCCEEEECCccCCccccCEEEcc--ccccccccccCCCCEECCCCCccc
Confidence 55 688876778999999 9999999999994 3333 2589999998643
No 76
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=98.33 E-value=2.5e-08 Score=64.43 Aligned_cols=51 Identities=20% Similarity=0.430 Sum_probs=40.7
Q ss_pred CCCCccCCCCCCCCceecC-CCCCCCCCCCCCCCcccccc---cCCCCcccCCCC
Q psy11251 2 LCPTQAEKSGQPEDLVSCS-DCGRSGHPTCLQFTNNMKVS---VKQYRWQCIECK 52 (190)
Q Consensus 2 ~C~~~~~~~g~~~~ll~C~-~C~~~~H~~Cl~~~~~~~~~---~~~~~W~C~~C~ 52 (190)
+|..+....++...+|.|| .|.++||..|+++....... .+...|+|+.|.
T Consensus 10 ~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 10 PCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp BCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred cCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 4777777777888999999 99999999999987754332 256799999873
No 77
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=98.31 E-value=6.7e-08 Score=68.26 Aligned_cols=51 Identities=20% Similarity=0.414 Sum_probs=40.1
Q ss_pred CCCCccCCCCCCCCceecC-CCCCCCCCCCCCCCcccccc---cCCCCcccCCCC
Q psy11251 2 LCPTQAEKSGQPEDLVSCS-DCGRSGHPTCLQFTNNMKVS---VKQYRWQCIECK 52 (190)
Q Consensus 2 ~C~~~~~~~g~~~~ll~C~-~C~~~~H~~Cl~~~~~~~~~---~~~~~W~C~~C~ 52 (190)
.|..+....++.++||.|+ .|..+||..|++++...... .+...|+|+.|.
T Consensus 5 ~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~ 59 (105)
T 2xb1_A 5 PCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCL 59 (105)
T ss_dssp BCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECcccc
Confidence 4777777766778899998 99999999999987654333 256799998884
No 78
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=98.30 E-value=4.1e-08 Score=63.39 Aligned_cols=47 Identities=21% Similarity=0.772 Sum_probs=36.3
Q ss_pred CCCcCCCCC-CCCCccccC-ccCCcccCCCCCCCCC------CCCCCCccCcccc
Q psy11251 53 CCSVCGTSD-NDDQLLFCD-DCDRGYHMYCLVPPIQ------TPPEGSWSCQLCL 99 (190)
Q Consensus 53 ~C~~C~~~~-~~~~ll~C~-~C~~~~H~~Cl~p~l~------~~p~~~W~C~~C~ 99 (190)
.|.+|++.. ++..+|.|| .|.++||..|++-... ..|.+.|+|+.|.
T Consensus 10 ~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 10 PCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp BCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred cCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 567788764 456889999 9999999999994321 1366799999996
No 79
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=98.30 E-value=8e-08 Score=59.26 Aligned_cols=47 Identities=19% Similarity=0.489 Sum_probs=34.7
Q ss_pred CCCcCCCCCC-CCCccccC-ccCCcccCCCCCCCCCCCCCCCccCcccc
Q psy11251 53 CCSVCGTSDN-DDQLLFCD-DCDRGYHMYCLVPPIQTPPEGSWSCQLCL 99 (190)
Q Consensus 53 ~C~~C~~~~~-~~~ll~C~-~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~ 99 (190)
.|.+|++..+ ++.+|.|| .|+.+||..|++-.........|+|+.|.
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 4568888764 56799999 89999999999943221123789999984
No 80
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.29 E-value=3.6e-08 Score=65.56 Aligned_cols=49 Identities=20% Similarity=0.537 Sum_probs=37.7
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCC-----CCCCccCccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTP-----PEGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~-----p~~~W~C~~C~~~~ 102 (190)
+| +|++..+++.||.||.|..|||..|++...... +...|+|+.|....
T Consensus 18 ~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~ 71 (76)
T 1wem_A 18 YC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILS 71 (76)
T ss_dssp CS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHS
T ss_pred EE-ECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCcc
Confidence 45 688877777999999999999999998432110 24689999998643
No 81
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.29 E-value=2.7e-07 Score=59.21 Aligned_cols=49 Identities=20% Similarity=0.407 Sum_probs=36.5
Q ss_pred CCCCccCCCCCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 2 LCPTQAEKSGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 2 ~C~~~~~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
+|..+.....+++.||.|+.|..+||..|+++....... ...|+|+.|.
T Consensus 8 ~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~--~~~~~C~~C~ 56 (64)
T 1we9_A 8 QCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEH--IKQYKCPSCS 56 (64)
T ss_dssp CCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGG--CSSCCCHHHH
T ss_pred CCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcC--CCcEECCCCc
Confidence 455555555567899999999999999999986543221 3589988884
No 82
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=98.27 E-value=7.8e-08 Score=68.98 Aligned_cols=83 Identities=20% Similarity=0.339 Sum_probs=50.0
Q ss_pred cCCCCCCCCCCCCCCCccccc---ccCCCC------cccCCCCCCCcCCCC-CCCCCccccCccCCcccCCCCCCCCCCC
Q psy11251 19 CSDCGRSGHPTCLQFTNNMKV---SVKQYR------WQCIECKCCSVCGTS-DNDDQLLFCDDCDRGYHMYCLVPPIQTP 88 (190)
Q Consensus 19 C~~C~~~~H~~Cl~~~~~~~~---~~~~~~------W~C~~C~~C~~C~~~-~~~~~ll~C~~C~~~~H~~Cl~p~l~~~ 88 (190)
|+.|...||..|++.+..+-. .-.-.. +.|..|..|..|... +.+..|+.|+.|+.+||..|++++...+
T Consensus 18 C~~C~~c~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~c~~c~~c~~c~~~~~~~~~m~~C~~C~~~~H~~C~~~~~~~~ 97 (117)
T 4bbq_A 18 CGVCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEGL 97 (117)
T ss_dssp CSCSHHHHHSGGGTSCCCSCCCCGGGCCSSCBCCTTCBCTTTCCBCCHHHHCCGGGSCEEETTTCCEECGGGCCSCCCCE
T ss_pred CCCCCCCcCCcccCCCCccccchhheeeccccccccccccccCcccccccccccCcceEEeeecCCeEECCCCCCCcccc
Confidence 899999999999875432210 000111 222222233333221 2234688999999999999999875543
Q ss_pred CC----CCccCcccccc
Q psy11251 89 PE----GSWSCQLCLKE 101 (190)
Q Consensus 89 p~----~~W~C~~C~~~ 101 (190)
+. ..|.|+.|...
T Consensus 98 ~~~~~~~~~~C~~C~~~ 114 (117)
T 4bbq_A 98 LNEELPNCWECPKCYQE 114 (117)
T ss_dssp ECSSSSSEEECTTTC--
T ss_pred ccccCCCCeECCCCcCC
Confidence 33 35999999864
No 83
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.26 E-value=8.5e-08 Score=64.25 Aligned_cols=49 Identities=20% Similarity=0.504 Sum_probs=37.1
Q ss_pred CCCcCCCCCC-CCCccccCccCCcccCCCCCCCCCCC-CCCCccCccccccc
Q psy11251 53 CCSVCGTSDN-DDQLLFCDDCDRGYHMYCLVPPIQTP-PEGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~~-~~~ll~C~~C~~~~H~~Cl~p~l~~~-p~~~W~C~~C~~~~ 102 (190)
+| +|++..+ ++.||.||.|..|||..|++-..... ....|+|+.|....
T Consensus 14 ~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 14 YC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred EE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 45 7887654 67899999999999999998432221 13689999998754
No 84
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=98.18 E-value=1e-07 Score=72.88 Aligned_cols=49 Identities=22% Similarity=0.525 Sum_probs=36.8
Q ss_pred CCCcCCCCC-CCCCccccCccCCcccCCCCCCCCCC-CCCCCccCccccccc
Q psy11251 53 CCSVCGTSD-NDDQLLFCDDCDRGYHMYCLVPPIQT-PPEGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~-~~~~ll~C~~C~~~~H~~Cl~p~l~~-~p~~~W~C~~C~~~~ 102 (190)
+| +|++.. +++.+|.||.|++|||..|++..... ...+.|+|+.|....
T Consensus 10 ~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~~ 60 (174)
T 2ri7_A 10 YC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTE 60 (174)
T ss_dssp ET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHHH
T ss_pred Ee-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcchh
Confidence 45 667654 36789999999999999999853222 235799999998653
No 85
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=98.14 E-value=1.3e-07 Score=68.91 Aligned_cols=46 Identities=15% Similarity=0.438 Sum_probs=35.2
Q ss_pred cCCCCCCCCceecCCCCCCCCCCCCCCCcc--ccccc--CCCCcccCCCC
Q psy11251 7 AEKSGQPEDLVSCSDCGRSGHPTCLQFTNN--MKVSV--KQYRWQCIECK 52 (190)
Q Consensus 7 ~~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~--~~~~~--~~~~W~C~~C~ 52 (190)
+.-.++||+|++||.|+++||..|+.++.. ....+ +.+.|+|..|.
T Consensus 60 C~vC~dGG~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~ 109 (129)
T 3ql9_A 60 CRWCAEGGNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICH 109 (129)
T ss_dssp CTTTCCCSEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTC
T ss_pred CeecCCCCeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcC
Confidence 356789999999999999999999975321 12233 68999988883
No 86
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=98.12 E-value=6.4e-07 Score=55.13 Aligned_cols=38 Identities=18% Similarity=0.544 Sum_probs=30.9
Q ss_pred CCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 11 GQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 11 g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
.+++.||.|+.|..+||..|+++... .+ ...|+|+.|.
T Consensus 13 ~~~~~MI~Cd~C~~W~H~~Cvgi~~~---~~-~~~~~C~~C~ 50 (52)
T 3o7a_A 13 FAGRPMIECNECHTWIHLSCAKIRKS---NV-PEVFVCQKCR 50 (52)
T ss_dssp CTTCCEEECTTTCCEEETTTTTCCGG---GC-CSSCCCHHHH
T ss_pred CCCCCEEEcCCCCccccccccCCCcc---cC-CCcEECcCCC
Confidence 35789999999999999999998653 23 3689998873
No 87
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.12 E-value=2.7e-07 Score=60.35 Aligned_cols=35 Identities=23% Similarity=0.595 Sum_probs=28.8
Q ss_pred CCCceecCCCC---CCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 13 PEDLVSCSDCG---RSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 13 ~~~ll~C~~C~---~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
.|.||.||.|. .+||+.|+++. .++.+.|+|+.|.
T Consensus 16 ~g~MI~CD~cdC~~~WfH~~Cvgl~-----~~p~~~w~Cp~C~ 53 (70)
T 1x4i_A 16 YGEMVGCDNQDCPIEWFHYGCVGLT-----EAPKGKWYCPQCT 53 (70)
T ss_dssp CSSEECCSCTTCSCCCEEHHHHTCS-----SCCSSCCCCHHHH
T ss_pred CCCEeEeCCCCCCccCCcccccccC-----cCCCCCEECCCCC
Confidence 45999999974 89999999874 3467899999884
No 88
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=98.07 E-value=1.1e-06 Score=57.05 Aligned_cols=39 Identities=18% Similarity=0.534 Sum_probs=31.0
Q ss_pred CCCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 10 SGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 10 ~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
..+++.||.|+.|..+||..|+++... .+ ...|+|+.|.
T Consensus 27 ~~~~~~MIqCd~C~~WfH~~Cvgi~~~---~~-~~~~~C~~C~ 65 (68)
T 3o70_A 27 PFAGRPMIECNECHTWIHLSCAKIRKS---NV-PEVFVCQKCR 65 (68)
T ss_dssp CCTTCCEEECTTTCCEEETTTTTCCTT---SC-CSSCCCHHHH
T ss_pred cCCCCCEEECCCCCccccccccCcCcc---cC-CCcEECCCCC
Confidence 345778999999999999999998653 23 3689998873
No 89
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.05 E-value=8.7e-07 Score=58.20 Aligned_cols=39 Identities=23% Similarity=0.659 Sum_probs=30.5
Q ss_pred CCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 11 GQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 11 g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
.+++.||.|+.|..+||..|+++... .. ....|+|+.|.
T Consensus 26 ~~g~~mI~Cd~C~~W~H~~Cvg~~~~--~~-~~~~~~C~~C~ 64 (72)
T 1wee_A 26 DDGERMLACDGCGVWHHTRCIGINNA--DA-LPSKFLCFRCI 64 (72)
T ss_dssp CCSSCEEECSSSCEEEETTTTTCCTT--SC-CCSCCCCHHHH
T ss_pred CCCCcEEECCCCCCccCCeeeccCcc--cc-CCCcEECCCcc
Confidence 45668999999999999999998642 12 24789998884
No 90
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=98.02 E-value=4.1e-07 Score=60.26 Aligned_cols=47 Identities=23% Similarity=0.567 Sum_probs=36.0
Q ss_pred cCCCCCC-CCCccccCccCCcccCCCCCCCCCCCCC-CCccCccccccc
Q psy11251 56 VCGTSDN-DDQLLFCDDCDRGYHMYCLVPPIQTPPE-GSWSCQLCLKEF 102 (190)
Q Consensus 56 ~C~~~~~-~~~ll~C~~C~~~~H~~Cl~p~l~~~p~-~~W~C~~C~~~~ 102 (190)
+|++..+ ++.||.||.|..+||..|++......+. ..|+|+.|....
T Consensus 14 iC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~~ 62 (75)
T 3kqi_A 14 VCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTH 62 (75)
T ss_dssp TTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHHH
T ss_pred ECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcccC
Confidence 6777644 5789999999999999999954333332 589999998653
No 91
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.97 E-value=1.9e-06 Score=57.58 Aligned_cols=41 Identities=17% Similarity=0.427 Sum_probs=31.7
Q ss_pred CCCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 10 SGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 10 ~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
..+++.||.|+.|..+||..|+++..... .....|+|+.|.
T Consensus 21 ~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~--~~~~~~~C~~C~ 61 (79)
T 1wep_A 21 YNVNHFMIECGLCQDWFHGSCVGIEEENA--VDIDIYHCPDCE 61 (79)
T ss_dssp CCSSSCEEEBTTTCCEEEHHHHTCCHHHH--TTCSBBCCTTTT
T ss_pred cCCCCceEEcCCCCCcEEeeecCcccccc--cCCCeEECCCcc
Confidence 34578999999999999999999865322 124689888884
No 92
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.95 E-value=5.1e-07 Score=59.92 Aligned_cols=43 Identities=14% Similarity=0.389 Sum_probs=32.1
Q ss_pred CCCCCCceecCCCCCCCCCCCCCCCccccccc--CCCCcccCCCC
Q psy11251 10 SGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSV--KQYRWQCIECK 52 (190)
Q Consensus 10 ~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~--~~~~W~C~~C~ 52 (190)
..+++.||.|+.|..+||..|+++.......+ ....|+|+.|.
T Consensus 24 ~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~ 68 (76)
T 1wem_A 24 PHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCT 68 (76)
T ss_dssp CCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHH
T ss_pred ccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCc
Confidence 33567999999999999999999865432211 25689998874
No 93
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=97.94 E-value=1.5e-06 Score=56.41 Aligned_cols=45 Identities=18% Similarity=0.414 Sum_probs=32.2
Q ss_pred CCCCCCCCceecCC--CCCCCCCCCCCCCcccccc-cCCCCcccCCCC
Q psy11251 8 EKSGQPEDLVSCSD--CGRSGHPTCLQFTNNMKVS-VKQYRWQCIECK 52 (190)
Q Consensus 8 ~~~g~~~~ll~C~~--C~~~~H~~Cl~~~~~~~~~-~~~~~W~C~~C~ 52 (190)
+...+.|.||.|++ |..+||..|+++....... .....|+|+.|+
T Consensus 16 ~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr 63 (68)
T 2rsd_A 16 SSTMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCR 63 (68)
T ss_dssp CCCSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHH
T ss_pred CCCcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCcc
Confidence 34456789999995 9999999999975432221 123579998884
No 94
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=97.80 E-value=1.4e-06 Score=66.55 Aligned_cols=46 Identities=13% Similarity=0.353 Sum_probs=34.0
Q ss_pred CccCCCCCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 5 TQAEKSGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 5 ~~~~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
.+....++++.||.||.|.++||..|+++.... ....+.|+|+.|.
T Consensus 12 ~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~--~~~~~~~~C~~C~ 57 (174)
T 2ri7_A 12 ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSE--AELIDEYVCPQCQ 57 (174)
T ss_dssp TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHH--HTTCSSCCCHHHH
T ss_pred eCCCCCCCCCCEeECCCCCchhChhhcCCchhh--ccCccCeecCCCc
Confidence 333334457899999999999999999875432 1235789998885
No 95
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=97.74 E-value=4.8e-06 Score=55.60 Aligned_cols=49 Identities=31% Similarity=0.630 Sum_probs=39.0
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCC------------CCCCCCCCccCccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPP------------IQTPPEGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~------------l~~~p~~~W~C~~C~~~~ 102 (190)
.|.||..+. .+.++.|..|.+.||..||.++ +...+...|.|+.|.+..
T Consensus 17 ~C~VC~~~t-~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL~ 77 (89)
T 1wil_A 17 MCDVCEVWT-AESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNIN 77 (89)
T ss_dssp CCTTTCCCC-SSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCCC
T ss_pred ccCcccccc-ccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccchhh
Confidence 677787663 6788999999999999999873 344566799999997654
No 96
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=97.69 E-value=4.8e-06 Score=64.25 Aligned_cols=51 Identities=27% Similarity=0.662 Sum_probs=36.6
Q ss_pred CCCcCCCCCCCC----CccccCccCCcccCCCCCCCCC------CCCC-CCccCcccccccc
Q psy11251 53 CCSVCGTSDNDD----QLLFCDDCDRGYHMYCLVPPIQ------TPPE-GSWSCQLCLKEFH 103 (190)
Q Consensus 53 ~C~~C~~~~~~~----~ll~C~~C~~~~H~~Cl~p~l~------~~p~-~~W~C~~C~~~~~ 103 (190)
+|.+|++..+++ .||.||.|+.|||..|++.... ..|+ ..|+|+.|.....
T Consensus 4 ~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~ 65 (183)
T 3lqh_A 4 FCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHP 65 (183)
T ss_dssp BCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSS
T ss_pred cCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCC
Confidence 467777654444 4999999999999999984311 1232 3899999987643
No 97
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.65 E-value=6.6e-06 Score=54.79 Aligned_cols=42 Identities=14% Similarity=0.401 Sum_probs=31.3
Q ss_pred CCCCCceecC--CCCCCCCCCCCCCCccccc--ccCCCCcccCCCC
Q psy11251 11 GQPEDLVSCS--DCGRSGHPTCLQFTNNMKV--SVKQYRWQCIECK 52 (190)
Q Consensus 11 g~~~~ll~C~--~C~~~~H~~Cl~~~~~~~~--~~~~~~W~C~~C~ 52 (190)
.+.|.||.|+ .|..+||..|++++..... ......|+|+.|.
T Consensus 25 ~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~ 70 (78)
T 1wew_A 25 LETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICR 70 (78)
T ss_dssp CCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHH
T ss_pred CCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCC
Confidence 4678999999 9999999999998653211 0124689998884
No 98
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=97.64 E-value=3.8e-06 Score=55.51 Aligned_cols=40 Identities=15% Similarity=0.426 Sum_probs=30.6
Q ss_pred CCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 11 GQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 11 g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
++++.||.|+.|..+||..|+++....... ...|+|+.|.
T Consensus 20 ~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~--~~~~~C~~C~ 59 (75)
T 3kqi_A 20 DVTRFMIECDACKDWFHGSCVGVEEEEAPD--IDIYHCPNCE 59 (75)
T ss_dssp CTTSCEEECTTTCCEEEHHHHTCCTTTGGG--BSSCCCHHHH
T ss_pred CCCCCEEEcCCCCCCEecccccccccccCC--CCEEECCCCc
Confidence 457899999999999999999986532221 2579888874
No 99
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=97.47 E-value=2.7e-05 Score=60.08 Aligned_cols=51 Identities=20% Similarity=0.610 Sum_probs=35.1
Q ss_pred CCCCccCCCCCC---CCceecCCCCCCCCCCCCCCCccccccc---C-CCCcccCCCC
Q psy11251 2 LCPTQAEKSGQP---EDLVSCSDCGRSGHPTCLQFTNNMKVSV---K-QYRWQCIECK 52 (190)
Q Consensus 2 ~C~~~~~~~g~~---~~ll~C~~C~~~~H~~Cl~~~~~~~~~~---~-~~~W~C~~C~ 52 (190)
+|..+.....++ +.||.||.|.++||..|+++..+..+.+ | ...|+|+.|.
T Consensus 4 ~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~ 61 (183)
T 3lqh_A 4 FCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCT 61 (183)
T ss_dssp BCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTC
T ss_pred cCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCC
Confidence 355555544443 4699999999999999999876432222 2 2379888884
No 100
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=97.32 E-value=7.9e-05 Score=65.70 Aligned_cols=50 Identities=14% Similarity=0.230 Sum_probs=37.4
Q ss_pred CCCCCccCCCCCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 1 MLCPTQAEKSGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 1 ~~C~~~~~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
|.+.++--..+.+..||.||.|..+||..|+++...... ....|+||.|.
T Consensus 43 ~s~kk~~~~~n~~~~mI~CD~C~~WfH~~CVgi~~~~a~--~~~~y~Cp~C~ 92 (528)
T 3pur_A 43 MSKKKSHHHKKNDFQWIGCDSCQTWYHFLCSGLEQFEYY--LYEKFFCPKCV 92 (528)
T ss_dssp CSCCCTTTTTTSTTSEEECTTTCCEEEGGGTTCCGGGTT--TEEECCCTTTH
T ss_pred ccccccccCCCcCCCEEECCCCCcCCCCcCCCCChhHhc--CCCeEECcCCc
Confidence 344444455567789999999999999999998764322 23689999995
No 101
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=97.22 E-value=1.6e-05 Score=70.06 Aligned_cols=45 Identities=20% Similarity=0.511 Sum_probs=35.7
Q ss_pred cCCCCCC-CCCccccCccCCcccCCCCCCCCCCCCC---CCccCccccccc
Q psy11251 56 VCGTSDN-DDQLLFCDDCDRGYHMYCLVPPIQTPPE---GSWSCQLCLKEF 102 (190)
Q Consensus 56 ~C~~~~~-~~~ll~C~~C~~~~H~~Cl~p~l~~~p~---~~W~C~~C~~~~ 102 (190)
+|++..+ ++.||.||.|+.+||..|++ +...+. +.|+|+.|....
T Consensus 41 ~C~~~~d~~~~MIqCd~C~~WfH~~Cvg--l~~~~~~~~~~~~C~~C~~~~ 89 (488)
T 3kv5_D 41 VCRQPYDVNRFMIECDICKDWFHGSCVG--VEEHHAVDIDLYHCPNCAVLH 89 (488)
T ss_dssp TTTEECCTTSCEEEBTTTCCEEEHHHHT--CCGGGGGGEEEBCCHHHHHHH
T ss_pred eCCCcCCCCCCeEEccCCCCceeeeecC--cCcccccCCCEEECCCCcCCc
Confidence 7887643 78899999999999999998 444332 589999998643
No 102
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=96.87 E-value=0.00029 Score=47.00 Aligned_cols=41 Identities=27% Similarity=0.647 Sum_probs=30.5
Q ss_pred CCCCceecCCCCCCCCCCCCCCC--------ccc-ccccCCCCcccCCCC
Q psy11251 12 QPEDLVSCSDCGRSGHPTCLQFT--------NNM-KVSVKQYRWQCIECK 52 (190)
Q Consensus 12 ~~~~ll~C~~C~~~~H~~Cl~~~--------~~~-~~~~~~~~W~C~~C~ 52 (190)
..++|+-|..|++.||..||... .++ .....+..|.|+.|.
T Consensus 25 t~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Ce 74 (89)
T 1wil_A 25 TAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCD 74 (89)
T ss_dssp CSSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTC
T ss_pred cccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccc
Confidence 37899999999999999998742 111 123356789999884
No 103
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=96.82 E-value=0.00022 Score=50.68 Aligned_cols=43 Identities=26% Similarity=0.569 Sum_probs=31.1
Q ss_pred CCCCCCceecCCCCCCCCCCCCCCCccc-ccccCCCCcccCCCC
Q psy11251 10 SGQPEDLVSCSDCGRSGHPTCLQFTNNM-KVSVKQYRWQCIECK 52 (190)
Q Consensus 10 ~g~~~~ll~C~~C~~~~H~~Cl~~~~~~-~~~~~~~~W~C~~C~ 52 (190)
......||.|+.|..+||..|+++..+. +.......|.|+.|.
T Consensus 69 ~~~~~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~ 112 (117)
T 4bbq_A 69 QDFEKKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCY 112 (117)
T ss_dssp CCGGGSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC
T ss_pred cccCcceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCc
Confidence 3345669999999999999999876532 222234569999884
No 104
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=96.56 E-value=0.00051 Score=60.59 Aligned_cols=83 Identities=22% Similarity=0.319 Sum_probs=44.3
Q ss_pred CCCceecCCCCCCCCCCCCCCCcccccccCC-CCcccCCCCCCCcCCC-CCCCCCccccCccCCcccCCCCCCCCCCCC-
Q psy11251 13 PEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQ-YRWQCIECKCCSVCGT-SDNDDQLLFCDDCDRGYHMYCLVPPIQTPP- 89 (190)
Q Consensus 13 ~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~-~~W~C~~C~~C~~C~~-~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p- 89 (190)
+.+-..|.+||..-|-.=+.. .+... -++ ..-.+ .+.-... .+.+..+|.||.|+.+||..|++-......
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~----s~kk~~~~~n~~~~mI~CD~C~~WfH~~CVgi~~~~a~~ 82 (528)
T 3pur_A 9 PKESDRCGGCGKFTHEDDLIA-LEEEK-KKEKEKPLM----SKKKSHHHKKNDFQWIGCDSCQTWYHFLCSGLEQFEYYL 82 (528)
T ss_dssp CCCSCCCTTTCCCC---------------------CC----SCCCTTTTTTSTTSEEECTTTCCEEEGGGTTCCGGGTTT
T ss_pred CCccchhhcccCCCchhhHHH-HHHHh-hhhhhhccc----cccccccCCCcCCCEEECCCCCcCCCCcCCCCChhHhcC
Confidence 455678999999988542211 00000 000 00000 1112221 234568899999999999999994322222
Q ss_pred CCCccCcccccc
Q psy11251 90 EGSWSCQLCLKE 101 (190)
Q Consensus 90 ~~~W~C~~C~~~ 101 (190)
.+.|+||.|...
T Consensus 83 ~~~y~Cp~C~~~ 94 (528)
T 3pur_A 83 YEKFFCPKCVPH 94 (528)
T ss_dssp EEECCCTTTHHH
T ss_pred CCeEECcCCcCC
Confidence 268999999864
No 105
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=96.46 E-value=0.0001 Score=64.15 Aligned_cols=46 Identities=17% Similarity=0.444 Sum_probs=35.1
Q ss_pred cCCCCCC-CCCccccCccCCcccCCCCCCCCCCCCC-CCccCcccccc
Q psy11251 56 VCGTSDN-DDQLLFCDDCDRGYHMYCLVPPIQTPPE-GSWSCQLCLKE 101 (190)
Q Consensus 56 ~C~~~~~-~~~ll~C~~C~~~~H~~Cl~p~l~~~p~-~~W~C~~C~~~ 101 (190)
+|++..+ ++.||.||.|+.+||..|++-.....+. +.|+|+.|...
T Consensus 9 iC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~~ 56 (447)
T 3kv4_A 9 LCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVL 56 (447)
T ss_dssp TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHHH
T ss_pred eCCCcCCCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCccc
Confidence 7777643 6899999999999999999833222222 68999999764
No 106
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=96.44 E-value=0.00025 Score=62.43 Aligned_cols=40 Identities=18% Similarity=0.428 Sum_probs=31.4
Q ss_pred CCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 11 GQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 11 g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
+.++.||.||.|..+||..|+++....... ...|+|+.|.
T Consensus 47 d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~--~~~~~C~~C~ 86 (488)
T 3kv5_D 47 DVNRFMIECDICKDWFHGSCVGVEEHHAVD--IDLYHCPNCA 86 (488)
T ss_dssp CTTSCEEEBTTTCCEEEHHHHTCCGGGGGG--EEEBCCHHHH
T ss_pred CCCCCeEEccCCCCceeeeecCcCcccccC--CCEEECCCCc
Confidence 447899999999999999999986533221 2579999885
No 107
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=96.41 E-value=0.00021 Score=62.19 Aligned_cols=41 Identities=15% Similarity=0.401 Sum_probs=31.9
Q ss_pred CCCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 10 SGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 10 ~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
..+++.||.||.|..+||..|++++..... ....|+|+.|.
T Consensus 14 ~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~--~~~~y~C~~C~ 54 (447)
T 3kv4_A 14 YDVTRFMIECDMCQDWFHGSCVGVEEEKAA--DIDLYHCPNCE 54 (447)
T ss_dssp CCTTSCEEECTTTCCEEEHHHHTCCHHHHT--TEEECCCHHHH
T ss_pred CCCCCCeEEcCCCCcccccccCCcCccccc--CCCEEECCCCc
Confidence 345799999999999999999998653221 13589999885
No 108
>4akv_A Sorting nexin-33; transport protein, organelle biogenesis; 2.65A {Homo sapiens}
Probab=96.41 E-value=0.00084 Score=57.35 Aligned_cols=62 Identities=15% Similarity=0.177 Sum_probs=54.5
Q ss_pred hHHHHHHHHhhcccccCCCCCcCccccccccccHHHHHhhhhhhhhhhhhhhHHHHHHHhhc
Q psy11251 121 AETLEKLRKVEGRIACDEDLKLSDTLRYYMRDSDAAKRLLYRRLRCLADYENANRNLERART 182 (190)
Q Consensus 121 se~~ek~rkle~r~a~dedlkl~d~l~~y~~~~~a~~~ll~rr~~~l~~~~~~~~~l~~~~~ 182 (190)
++.++++..+....+.+++..+.+.|.+|.+...+.++++++|.++|++|++++|.++++++
T Consensus 259 ~~~~e~i~~l~~~Qa~~d~~~L~E~L~~Y~~ll~s~Kdll~~R~~aL~k~~ea~kl~~~~K~ 320 (386)
T 4akv_A 259 GRTYEAIGEMFAEQPKNDLFQMLDTLSLYQGLLSNFPDIIHLQKGAFAKVKESQRMSDEGRM 320 (386)
T ss_dssp HHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 45567778888888999999999999999999999999999999999999999987766443
No 109
>3dyt_A Sorting nexin-9; 3-helix bundle, BAR domain, PX domain, phosphoprotein, protein transport, SH3 domain, transport, transport protein; 2.08A {Homo sapiens} PDB: 3dyu_A 2raj_A 2rai_A 2rak_A*
Probab=96.19 E-value=0.00049 Score=58.34 Aligned_cols=65 Identities=6% Similarity=0.042 Sum_probs=56.0
Q ss_pred hHHHHHHHHhhcccccCCCCCcCccccccccccHHHHHhhhhhhhhhhhhhhHHHHHHHhhcCCC
Q psy11251 121 AETLEKLRKVEGRIACDEDLKLSDTLRYYMRDSDAAKRLLYRRLRCLADYENANRNLERARTKNK 185 (190)
Q Consensus 121 se~~ek~rkle~r~a~dedlkl~d~l~~y~~~~~a~~~ll~rr~~~l~~~~~~~~~l~~~~~~~~ 185 (190)
++.++++..+....+.+++..+.+.|.+|.+...+.++++++|.++|++|.+++|.+..+++.+.
T Consensus 239 ~~~~~~i~~l~~~qa~~d~~~l~E~L~~Y~~~l~avKd~l~~r~~aL~k~~e~~kl~~~~K~~~~ 303 (366)
T 3dyt_A 239 GKTYEEIASLVAEQPKKDLHFLMECNHEYKGFLGCFPDIIGTHKGAIEKVKESDKLVATSKITLQ 303 (366)
T ss_dssp HHHHHHHHHHHHHSGGGTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTHHHHHHTTSSCHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchh
Confidence 34556777788888888889999999999999999999999999999999999988877765543
No 110
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=96.05 E-value=0.00069 Score=48.69 Aligned_cols=37 Identities=22% Similarity=0.744 Sum_probs=27.8
Q ss_pred CceecCCCCCCCCCCCCCCCcccc---cccC-CCCcccCCC
Q psy11251 15 DLVSCSDCGRSGHPTCLQFTNNMK---VSVK-QYRWQCIEC 51 (190)
Q Consensus 15 ~ll~C~~C~~~~H~~Cl~~~~~~~---~~~~-~~~W~C~~C 51 (190)
.||.||.|..|||..|++++.++. ...| ...|.|+.|
T Consensus 1 ~mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C 41 (140)
T 2ku7_A 1 SMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNC 41 (140)
T ss_dssp CCCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCC
T ss_pred CccccccCCCccCCcccccCHHHHHHHhhccccceeeCccc
Confidence 489999999999999999875422 2223 346888888
No 111
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=95.24 E-value=0.0036 Score=44.82 Aligned_cols=38 Identities=26% Similarity=0.580 Sum_probs=28.9
Q ss_pred CccccCccCCcccCCCCCCCC------CCCCC-CCccCccccccc
Q psy11251 65 QLLFCDDCDRGYHMYCLVPPI------QTPPE-GSWSCQLCLKEF 102 (190)
Q Consensus 65 ~ll~C~~C~~~~H~~Cl~p~l------~~~p~-~~W~C~~C~~~~ 102 (190)
.||.||.|+.|||..|..-.- ...|+ ..|.|+.|....
T Consensus 1 ~mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~~ 45 (140)
T 2ku7_A 1 SMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERH 45 (140)
T ss_dssp CCCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTTS
T ss_pred CccccccCCCccCCcccccCHHHHHHHhhccccceeeCccccccc
Confidence 378999999999999988321 23353 489999998643
No 112
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=93.12 E-value=0.049 Score=41.41 Aligned_cols=47 Identities=15% Similarity=0.229 Sum_probs=31.4
Q ss_pred cCCCCCC-CCCccccCccCCcccCCCCCCCCCC-CCC---CCccCccccccc
Q psy11251 56 VCGTSDN-DDQLLFCDDCDRGYHMYCLVPPIQT-PPE---GSWSCQLCLKEF 102 (190)
Q Consensus 56 ~C~~~~~-~~~ll~C~~C~~~~H~~Cl~p~l~~-~p~---~~W~C~~C~~~~ 102 (190)
-||..++ ...+|.|+.|.++||..|+..+... +|. ..+.|..|....
T Consensus 9 YCG~~~~~~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~~g 60 (177)
T 3rsn_A 9 DEENGRQLGEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHHSG 60 (177)
T ss_dssp --CTTCCTTSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTSTTS
T ss_pred EcCCCCCCCceeEeeccccceecHHHhcccccCccccceeEEEEccccCCCC
Confidence 4665443 3467999999999999999854322 332 266799997643
No 113
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=90.80 E-value=0.031 Score=41.73 Aligned_cols=44 Identities=18% Similarity=0.560 Sum_probs=31.6
Q ss_pred CCCCCCCCceecC--CCCCCCCCCCCCCC--c-ccccccCCCCcccCCC
Q psy11251 8 EKSGQPEDLVSCS--DCGRSGHPTCLQFT--N-NMKVSVKQYRWQCIEC 51 (190)
Q Consensus 8 ~~~g~~~~ll~C~--~C~~~~H~~Cl~~~--~-~~~~~~~~~~W~C~~C 51 (190)
.-.++||+|+.|+ .|++.|-..|++.. + .+........|.|--|
T Consensus 83 ~wC~~Gg~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C 131 (159)
T 3a1b_A 83 TICCGGREVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMC 131 (159)
T ss_dssp TTTSCCSEEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTT
T ss_pred eEecCCCeEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEec
Confidence 3457899999999 79999999998632 1 2223355789966555
No 114
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=89.92 E-value=0.13 Score=39.12 Aligned_cols=23 Identities=13% Similarity=0.160 Sum_probs=19.7
Q ss_pred CCCCceecCCCCCCCCCCCCCCC
Q psy11251 12 QPEDLVSCSDCGRSGHPTCLQFT 34 (190)
Q Consensus 12 ~~~~ll~C~~C~~~~H~~Cl~~~ 34 (190)
-+-.++.|..|.++||..|+...
T Consensus 16 ~~~~mLqC~~C~qWFH~~Cl~~~ 38 (177)
T 3rsn_A 16 LGEVELQCGICTKWFTADTFGID 38 (177)
T ss_dssp TTSCEEECTTTCCEEEGGGGTCC
T ss_pred CCceeEeeccccceecHHHhccc
Confidence 35679999999999999999853
No 115
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=88.52 E-value=0.15 Score=34.16 Aligned_cols=38 Identities=21% Similarity=0.677 Sum_probs=28.4
Q ss_pred ccCCCCcccCCCCCCCcCCCCCCCCCccccCc--cCCcccCCCCC
Q psy11251 40 SVKQYRWQCIECKCCSVCGTSDNDDQLLFCDD--CDRGYHMYCLV 82 (190)
Q Consensus 40 ~~~~~~W~C~~C~~C~~C~~~~~~~~ll~C~~--C~~~~H~~Cl~ 82 (190)
.||...|. ..|.+|++. ..|--|.|.. |.++||..|-.
T Consensus 10 NIp~~R~~----l~C~iC~~~-~~GAciqC~~~~C~~~fHv~CA~ 49 (87)
T 2lq6_A 10 NIPPARWK----LTCYLCKQK-GVGASIQCHKANCYTAFHVTCAQ 49 (87)
T ss_dssp CCCCCCCC----CCBTTTTBC-CSSCEEECSCTTTCCEEEHHHHH
T ss_pred CCChHHhc----CCCcCCCCC-CCcEeEecCCCCCCCcCcHHHHH
Confidence 56777885 467888753 1367788975 99999999954
No 116
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=87.79 E-value=0.0056 Score=43.45 Aligned_cols=79 Identities=20% Similarity=0.585 Sum_probs=49.1
Q ss_pred CCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC------------------CCCcCCCCCC----CCCccccCc
Q psy11251 14 EDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK------------------CCSVCGTSDN----DDQLLFCDD 71 (190)
Q Consensus 14 ~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~------------------~C~~C~~~~~----~~~ll~C~~ 71 (190)
+..+.-..|+..||..|+..+. ...-.||.|+ .|.+|...-. .+..+....
T Consensus 24 ~~~~~~~~CgH~fc~~Ci~~~~-------~~~~~CP~Cr~~~~~~~l~~l~i~~~~~~C~iC~~~~~~~~~~~~~~~~~~ 96 (133)
T 4ap4_A 24 GRLIVSTECGHVFCSQCLRDSL-------KNANTCPTCRKKINHKRYHPIYIGSGTVSCPICMDGYSEIVQNGRLIVSTE 96 (133)
T ss_dssp TCCEEEETTCCEEEHHHHHHHH-------TTCSBCTTTCCBCTTTCEEECBCSSSSCBCTTTCCBHHHHHHTTCCEEEET
T ss_pred ccCeEecCCCChhhHHHHHHHH-------HhCCCCCCCCCcCccccccccccCCCCCCCCCCCCccccccccCcceEeCC
Confidence 3444556799999999985322 1123788887 6777764311 122334557
Q ss_pred cCCcccCCCCCCCCCCCCCCCccCcccccccc
Q psy11251 72 CDRGYHMYCLVPPIQTPPEGSWSCQLCLKEFH 103 (190)
Q Consensus 72 C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 103 (190)
|+-.||..|+.+-+.. ...||.|+....
T Consensus 97 CgH~fc~~Ci~~~~~~----~~~CP~Cr~~~~ 124 (133)
T 4ap4_A 97 CGHVFCSQCLRDSLKN----ANTCPTCRKKIN 124 (133)
T ss_dssp TSBEEEHHHHHHHHHH----CSBCTTTCCBCC
T ss_pred CCChhhHHHHHHHHHc----CCCCCCCCCcCC
Confidence 8888898888754322 248999987543
No 117
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=85.84 E-value=0.08 Score=39.51 Aligned_cols=47 Identities=23% Similarity=0.725 Sum_probs=37.0
Q ss_pred CCCcCCCCCCCCCccccC--ccCCcccCCCCCCCCCC------CCCCCccCccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCD--DCDRGYHMYCLVPPIQT------PPEGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~--~C~~~~H~~Cl~p~l~~------~p~~~W~C~~C~~~~ 102 (190)
+|.+|+ +++.++.|+ .|.+.|=..|+.--+.. .....|.|--|....
T Consensus 81 yC~wC~---~Gg~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~~ 135 (159)
T 3a1b_A 81 YCTICC---GGREVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKG 135 (159)
T ss_dssp SCTTTS---CCSEEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSSC
T ss_pred eeeEec---CCCeEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCCcc
Confidence 888998 478999999 89999999997532211 345799999998754
No 118
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=85.58 E-value=0.42 Score=25.71 Aligned_cols=18 Identities=39% Similarity=0.951 Sum_probs=13.0
Q ss_pred CCCCcccCCCC--------CCCcCCC
Q psy11251 42 KQYRWQCIECK--------CCSVCGT 59 (190)
Q Consensus 42 ~~~~W~C~~C~--------~C~~C~~ 59 (190)
+.++|.|+.|. .|..|+.
T Consensus 2 k~gDW~C~~C~~~Nfa~r~~C~~C~~ 27 (32)
T 2lk0_A 2 KFEDWLCNKCCLNNFRKRLKCFRCGA 27 (32)
T ss_dssp CCSEEECTTTCCEEETTCCBCTTTCC
T ss_pred CCCCCCcCcCcCCcChhcceecCCCC
Confidence 36899999885 5666654
No 119
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=84.30 E-value=0.74 Score=24.88 Aligned_cols=11 Identities=36% Similarity=1.090 Sum_probs=8.9
Q ss_pred CCCCcccCCCC
Q psy11251 42 KQYRWQCIECK 52 (190)
Q Consensus 42 ~~~~W~C~~C~ 52 (190)
..++|.|+.|.
T Consensus 3 ~~gDW~C~~C~ 13 (33)
T 2k1p_A 3 SANDWQCKTCS 13 (33)
T ss_dssp SSSSCBCSSSC
T ss_pred CCCCcccCCCC
Confidence 46899999885
No 120
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=83.65 E-value=0.86 Score=26.69 Aligned_cols=27 Identities=19% Similarity=0.386 Sum_probs=18.4
Q ss_pred cCCCCCCCCceecCCCCCCCCCCCCCC
Q psy11251 7 AEKSGQPEDLVSCSDCGRSGHPTCLQF 33 (190)
Q Consensus 7 ~~~~g~~~~ll~C~~C~~~~H~~Cl~~ 33 (190)
-....+++....-..|+..||..|+..
T Consensus 12 ~~~~~~~~~~~~~~~C~H~f~~~Ci~~ 38 (55)
T 1iym_A 12 LAELEDGEEARFLPRCGHGFHAECVDM 38 (55)
T ss_dssp CCCCCTTSCCEECSSSCCEECTTHHHH
T ss_pred CccccCCCceEECCCCCCcccHHHHHH
Confidence 334444555565567999999999853
No 121
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=83.16 E-value=0.23 Score=42.23 Aligned_cols=46 Identities=22% Similarity=0.390 Sum_probs=32.1
Q ss_pred cCCCCCCCCceecC--CCCCCCCCCCCCCCc--c-cccccCCCCcccCCCC
Q psy11251 7 AEKSGQPEDLVSCS--DCGRSGHPTCLQFTN--N-MKVSVKQYRWQCIECK 52 (190)
Q Consensus 7 ~~~~g~~~~ll~C~--~C~~~~H~~Cl~~~~--~-~~~~~~~~~W~C~~C~ 52 (190)
+.-.++||+|+.|+ .|++.|-..|++... . +........|.|--|.
T Consensus 96 Cr~C~~Gg~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~ 146 (386)
T 2pv0_B 96 CSICCSGETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCL 146 (386)
T ss_dssp CTTTCCCSSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTS
T ss_pred ceEcCCCCeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcC
Confidence 34567899999999 999999999986321 1 1122235789776664
No 122
>1n0z_A ZNF265; zinc finger, RNA splicing, transcription; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=82.00 E-value=1.2 Score=25.91 Aligned_cols=21 Identities=33% Similarity=0.966 Sum_probs=14.2
Q ss_pred ccCCCCcccC--CCC--------CCCcCCCC
Q psy11251 40 SVKQYRWQCI--ECK--------CCSVCGTS 60 (190)
Q Consensus 40 ~~~~~~W~C~--~C~--------~C~~C~~~ 60 (190)
....++|.|+ .|. .|..|+..
T Consensus 9 ~~~~GDW~C~~~~C~~~Nfa~R~~C~~C~~p 39 (45)
T 1n0z_A 9 RVSDGDWICPDKKCGNVNFARRTSCDRCGRE 39 (45)
T ss_dssp SSCSSSCBCSSTTTCCBCCSSCSBCSSSCCB
T ss_pred CCCCCCcCCCCCCCCCEEccccccccccCCc
Confidence 3457899999 675 55556543
No 123
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=80.99 E-value=0.053 Score=46.10 Aligned_cols=47 Identities=34% Similarity=0.871 Sum_probs=36.4
Q ss_pred CCCcCCCCCCCCCccccC--ccCCcccCCCCCCCCC-----C-CCCCCccCccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCD--DCDRGYHMYCLVPPIQ-----T-PPEGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~--~C~~~~H~~Cl~p~l~-----~-~p~~~W~C~~C~~~~ 102 (190)
+|..|+ +++.++.|| .|.+.|=..|+.--+. . .....|.|--|....
T Consensus 95 yCr~C~---~Gg~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~p 149 (386)
T 2pv0_B 95 YCSICC---SGETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPSS 149 (386)
T ss_dssp SCTTTC---CCSSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSCC
T ss_pred cceEcC---CCCeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCcc
Confidence 888898 478999999 9999999999764221 1 234689999998654
No 124
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=78.80 E-value=0.83 Score=26.77 Aligned_cols=45 Identities=27% Similarity=0.583 Sum_probs=28.4
Q ss_pred CCCcCCCCCCCC-CccccCccCCcccCCCCCCCCCCCCCCCccCcccccc
Q psy11251 53 CCSVCGTSDNDD-QLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKE 101 (190)
Q Consensus 53 ~C~~C~~~~~~~-~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~ 101 (190)
.|.+|...-..+ ..+.-..|.-.||..|+..-+.. ...||.|+..
T Consensus 7 ~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~----~~~CP~Cr~~ 52 (55)
T 1iym_A 7 ECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGS----HSTCPLCRLT 52 (55)
T ss_dssp CCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTT----CCSCSSSCCC
T ss_pred cCccCCccccCCCceEECCCCCCcccHHHHHHHHHc----CCcCcCCCCE
Confidence 466776543332 23333468889999998754433 3579999764
No 125
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.75 E-value=0.64 Score=30.04 Aligned_cols=47 Identities=19% Similarity=0.460 Sum_probs=32.1
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCcccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEFH 103 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 103 (190)
.|.+|...... -+.|..|...||..|+..-+... ..=.||.|.....
T Consensus 17 ~C~IC~~~i~~--g~~C~~C~h~fH~~Ci~kWl~~~--~~~~CP~Cr~~w~ 63 (74)
T 2ct0_A 17 ICNICHSLLIQ--GQSCETCGIRMHLPCVAKYFQSN--AEPRCPHCNDYWP 63 (74)
T ss_dssp BCSSSCCBCSS--SEECSSSCCEECHHHHHHHSTTC--SSCCCTTTCSCCC
T ss_pred cCcchhhHccc--CCccCCCCchhhHHHHHHHHHhc--CCCCCCCCcCcCC
Confidence 57777754332 35678999999999997544332 2247999987654
No 126
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=71.16 E-value=1.8 Score=27.34 Aligned_cols=47 Identities=26% Similarity=0.514 Sum_probs=28.5
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCcccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEFH 103 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 103 (190)
.|.+|...-.....+.--.|.-.||..|+..-+.. ...||.|+....
T Consensus 17 ~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~~~ 63 (78)
T 2ect_A 17 ECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQ----HDSCPVCRKSLT 63 (78)
T ss_dssp CCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTT----TCSCTTTCCCCC
T ss_pred CCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHc----CCcCcCcCCccC
Confidence 56677654333333322357888999998753322 248999987653
No 127
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=69.80 E-value=5.6 Score=26.33 Aligned_cols=34 Identities=29% Similarity=0.816 Sum_probs=25.2
Q ss_pred CCCceecCCCCC-CCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 13 PEDLVSCSDCGR-SGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 13 ~~~ll~C~~C~~-~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
.=+||.|..|+. .-|..|.... .....|.|..|.
T Consensus 43 ~W~L~lC~~Cgs~gtH~~Cs~l~------~~~~~weC~~C~ 77 (85)
T 1weq_A 43 RWRLILCATCGSHGTHRDCSSLR------PNSKKWECNECL 77 (85)
T ss_dssp TTBCEECSSSCCCEECSGGGTCC------TTCSCCCCTTTS
T ss_pred CEEEEeCcccCCchhHHHHhCCc------CCCCCEECCcCc
Confidence 568999999984 5799998642 235689877774
No 128
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=65.60 E-value=2 Score=27.90 Aligned_cols=49 Identities=27% Similarity=0.591 Sum_probs=28.4
Q ss_pred CCCcCCCCCC-CCCccc-c--CccCCcccCCCCCCCCCCCCCCCccCcccccccc
Q psy11251 53 CCSVCGTSDN-DDQLLF-C--DDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEFH 103 (190)
Q Consensus 53 ~C~~C~~~~~-~~~ll~-C--~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 103 (190)
.|.+|....+ ++.++. | .+....||..|+..=+.. .+...||.|.....
T Consensus 17 ~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~--~~~~~CplCr~~~~ 69 (80)
T 2d8s_A 17 ICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKS--SDTRCCELCKYEFI 69 (80)
T ss_dssp CCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHH--HCCSBCSSSCCBCC
T ss_pred CCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhh--CCCCCCCCCCCeee
Confidence 5667764332 334432 2 222489999999743221 13468999987654
No 129
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=63.41 E-value=4 Score=27.01 Aligned_cols=33 Identities=33% Similarity=0.981 Sum_probs=25.1
Q ss_pred CccccCccC-CcccCCCCCCCCCCCCCCCccCccccc
Q psy11251 65 QLLFCDDCD-RGYHMYCLVPPIQTPPEGSWSCQLCLK 100 (190)
Q Consensus 65 ~ll~C~~C~-~~~H~~Cl~p~l~~~p~~~W~C~~C~~ 100 (190)
.||.|..|. .+-|..|.. +. .....|.|..|..
T Consensus 45 ~L~lC~~Cgs~gtH~~Cs~--l~-~~~~~weC~~C~~ 78 (85)
T 1weq_A 45 RLILCATCGSHGTHRDCSS--LR-PNSKKWECNECLP 78 (85)
T ss_dssp BCEECSSSCCCEECSGGGT--CC-TTCSCCCCTTTSC
T ss_pred EEEeCcccCCchhHHHHhC--Cc-CCCCCEECCcCcc
Confidence 577788885 678999988 32 2456899999985
No 130
>1nj3_A NPL4; NZF domain, rubredoxin knuckle, beta-ribbon, zinc- finger, ubiquitin, protein binding; NMR {Rattus norvegicus} SCOP: g.41.11.1 PDB: 1q5w_A
Probab=63.38 E-value=4.1 Score=21.27 Aligned_cols=10 Identities=30% Similarity=1.062 Sum_probs=7.8
Q ss_pred CCCcccCCCC
Q psy11251 43 QYRWQCIECK 52 (190)
Q Consensus 43 ~~~W~C~~C~ 52 (190)
...|.|+.|.
T Consensus 4 ~~~W~C~~CT 13 (31)
T 1nj3_A 4 SAMWACQHCT 13 (31)
T ss_dssp SCCEECSSSC
T ss_pred CccccCCccc
Confidence 3479999986
No 131
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=62.18 E-value=1.5 Score=25.51 Aligned_cols=26 Identities=23% Similarity=0.345 Sum_probs=18.1
Q ss_pred CCCCCCCCceecCCCCCCCCCCCCCC
Q psy11251 8 EKSGQPEDLVSCSDCGRSGHPTCLQF 33 (190)
Q Consensus 8 ~~~g~~~~ll~C~~C~~~~H~~Cl~~ 33 (190)
....++++.+.-..|+..||..|+..
T Consensus 13 ~~~~~~~~~~~~~~CgH~fc~~Ci~~ 38 (55)
T 2ecm_A 13 EDIHTSRVVAHVLPCGHLLHRTCYEE 38 (55)
T ss_dssp CCCCTTTSCEEECTTSCEEETTHHHH
T ss_pred hhhcCCCcCeEecCCCCcccHHHHHH
Confidence 33334455666677999999999853
No 132
>2d9g_A YY1-associated factor 2; ZF-ranbp domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.64 E-value=5.9 Score=23.70 Aligned_cols=12 Identities=25% Similarity=0.767 Sum_probs=9.0
Q ss_pred cCCCCcccCCCC
Q psy11251 41 VKQYRWQCIECK 52 (190)
Q Consensus 41 ~~~~~W~C~~C~ 52 (190)
.+.+.|.|+.|.
T Consensus 7 ~~~~~W~C~~CT 18 (53)
T 2d9g_A 7 GDEGYWDCSVCT 18 (53)
T ss_dssp SCCCCEECSSSC
T ss_pred CCCCCcCCCCCc
Confidence 346789988885
No 133
>2lbz_A Thuricin17, thurincin H; helical loops, crosslinked, antimicrobial protein; HET: DSG 2TL DSN; NMR {Bacillus thuringiensis}
Probab=61.46 E-value=1.6 Score=22.44 Aligned_cols=14 Identities=36% Similarity=1.374 Sum_probs=11.7
Q ss_pred CcccCCCCCCCcCC
Q psy11251 45 RWQCIECKCCSVCG 58 (190)
Q Consensus 45 ~W~C~~C~~C~~C~ 58 (190)
+|.|..|.+|..|.
T Consensus 1 dwtcwsclvcaacs 14 (31)
T 2lbz_A 1 DWTCWSCLVCAACS 14 (31)
T ss_dssp CCCTTGGGGGGGCC
T ss_pred CccHHHHHHHHHhH
Confidence 58888898888886
No 134
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=61.42 E-value=2.6 Score=31.06 Aligned_cols=38 Identities=21% Similarity=0.338 Sum_probs=20.6
Q ss_pred CCCCcccCCCC------CCCcCCCCCCCCCccccCccCCcccCCC
Q psy11251 42 KQYRWQCIECK------CCSVCGTSDNDDQLLFCDDCDRGYHMYC 80 (190)
Q Consensus 42 ~~~~W~C~~C~------~C~~C~~~~~~~~ll~C~~C~~~~H~~C 80 (190)
.++.-+|..|- .|..|++...++.++. ..=+..||..|
T Consensus 50 ~~g~~yC~~~y~~~f~~~C~~C~~~I~~~~~v~-~a~~~~~H~~C 93 (169)
T 2rgt_A 50 RGESVYCKDDFFKRFGTKCAACQLGIPPTQVVR-RAQDFVYHLHC 93 (169)
T ss_dssp SSSCEECHHHHHHHHSCBCTTTCCBCCTTSEEE-EETTEEEEGGG
T ss_pred cCCeeeecccccccccccccccccccCCCcEEE-EcCCceEeeCC
Confidence 35566666552 6777776654443321 13355666665
No 135
>3a9j_C Mitogen-activated protein kinase kinase kinase 7- interacting protein 2; protein complex, cytoplasm, isopeptide bond, metal-binding, zinc; 1.18A {Mus musculus} PDB: 2wwz_C 2wx0_C 2wx1_C 3a9k_C
Probab=61.30 E-value=4.3 Score=21.70 Aligned_cols=10 Identities=30% Similarity=1.189 Sum_probs=8.0
Q ss_pred CCCcccCCCC
Q psy11251 43 QYRWQCIECK 52 (190)
Q Consensus 43 ~~~W~C~~C~ 52 (190)
...|.|+.|.
T Consensus 6 ~~~W~C~~CT 15 (34)
T 3a9j_C 6 GAQWNCTACT 15 (34)
T ss_dssp CCCEECTTTC
T ss_pred CCcCCCCCCc
Confidence 5689999886
No 136
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=60.60 E-value=1.5 Score=34.61 Aligned_cols=47 Identities=21% Similarity=0.486 Sum_probs=33.0
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCcccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEFH 103 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 103 (190)
.|.+|.+-.. .-+.|..|...||..|+.--+.. .+.-.||.|...+.
T Consensus 182 ~C~iC~~iv~--~g~~C~~C~~~~H~~C~~~~~~~--~~~~~CP~C~~~W~ 228 (238)
T 3nw0_A 182 ICNICHSLLI--QGQSCETCGIRMHLPCVAKYFQS--NAEPRCPHCNDYWP 228 (238)
T ss_dssp BCTTTCSBCS--SCEECSSSCCEECHHHHHHHTTT--CSSCBCTTTCCBCC
T ss_pred cCcchhhHHh--CCcccCccChHHHHHHHHHHHHh--CCCCCCCCCCCCCC
Confidence 6788886433 34779889999999998643222 23558999987653
No 137
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=58.71 E-value=3.5 Score=34.65 Aligned_cols=50 Identities=26% Similarity=0.525 Sum_probs=30.0
Q ss_pred CCCcCCCCCCC-C--CccccC--ccCCcccCCCCCCCCCCCCC-------CCccCccccccc
Q psy11251 53 CCSVCGTSDND-D--QLLFCD--DCDRGYHMYCLVPPIQTPPE-------GSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~~~-~--~ll~C~--~C~~~~H~~Cl~p~l~~~p~-------~~W~C~~C~~~~ 102 (190)
.|.+|-....+ + ....|+ .|...||..|+..=+...+. -.-.||.|..+.
T Consensus 310 ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pI 371 (381)
T 3k1l_B 310 RCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKL 371 (381)
T ss_dssp SCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEE
T ss_pred cCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcC
Confidence 46666543322 3 335798 89999999999742211111 123599998754
No 138
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=56.80 E-value=0.54 Score=29.12 Aligned_cols=46 Identities=17% Similarity=0.395 Sum_probs=27.6
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 102 (190)
.|.+|......+..+..-.|.-.||..|+..-+.. ...||.|+...
T Consensus 16 ~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~~ 61 (69)
T 2kiz_A 16 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLIT----NKKCPICRVDI 61 (69)
T ss_dssp SBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHH----CSBCTTTCSBS
T ss_pred CCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHc----CCCCcCcCccc
Confidence 46666544333333444468888999998643222 23599998654
No 139
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Probab=55.49 E-value=13 Score=24.33 Aligned_cols=7 Identities=29% Similarity=1.274 Sum_probs=3.0
Q ss_pred cCCCCCC
Q psy11251 19 CSDCGRS 25 (190)
Q Consensus 19 C~~C~~~ 25 (190)
|..|++.
T Consensus 8 C~~C~~~ 14 (101)
T 2cup_A 8 CVECRKP 14 (101)
T ss_dssp CSSSCCB
T ss_pred CcccCCc
Confidence 4444443
No 140
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=55.39 E-value=5.4 Score=25.06 Aligned_cols=12 Identities=42% Similarity=0.830 Sum_probs=8.3
Q ss_pred cccCccCCcccC
Q psy11251 67 LFCDDCDRGYHM 78 (190)
Q Consensus 67 l~C~~C~~~~H~ 78 (190)
|.|..|-+-.|.
T Consensus 29 LYC~rC~rE~H~ 40 (67)
T 2d8v_A 29 LYCARCFREGHD 40 (67)
T ss_dssp EECSSHHHHHTT
T ss_pred eehHHHHHHHcc
Confidence 667777777774
No 141
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.72 E-value=0.42 Score=30.27 Aligned_cols=46 Identities=24% Similarity=0.544 Sum_probs=29.1
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 102 (190)
.|.+|...-..+..+..-.|.-.||..|+..-+.. ...||.|+...
T Consensus 25 ~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~----~~~CP~Cr~~~ 70 (75)
T 1x4j_A 25 LCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKA----NRTCPICRADS 70 (75)
T ss_dssp EETTTTEECCBTCEEEEETTTEEEETTHHHHHHHH----CSSCTTTCCCC
T ss_pred CCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHc----CCcCcCcCCcC
Confidence 56677654334444444458888999998753222 24799998654
No 142
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=53.54 E-value=2.7 Score=31.36 Aligned_cols=37 Identities=19% Similarity=0.507 Sum_probs=17.7
Q ss_pred ceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCCCCCcCCCC
Q psy11251 16 LVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECKCCSVCGTS 60 (190)
Q Consensus 16 ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~~C~~~ 60 (190)
...|..|++..-. ..+. .+....|+ +.|-.|..|++.
T Consensus 60 ~~~C~~C~~~I~~------~~~~-~a~~~~wH-~~CF~C~~C~~~ 96 (182)
T 2jtn_A 60 IPMCAGCDQHILD------RFIL-KALDRHWH-SKCLKCSDCHVP 96 (182)
T ss_dssp CCBCBTSSSBCCC------SEEE-EETTEEEC-SSTTSCTTTCCC
T ss_pred CCcCccCCCCccC------ceeE-EecCCeEc-cccCccCCCCCc
Confidence 4567777765431 1111 12234554 455556666554
No 143
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=53.47 E-value=4.7 Score=25.19 Aligned_cols=13 Identities=38% Similarity=0.871 Sum_probs=9.0
Q ss_pred CCCCCCCCCCCCC
Q psy11251 21 DCGRSGHPTCLQF 33 (190)
Q Consensus 21 ~C~~~~H~~Cl~~ 33 (190)
.|+..||..|+..
T Consensus 29 ~CgH~fC~~Ci~~ 41 (79)
T 2egp_A 29 DCGHSLCRACITV 41 (79)
T ss_dssp SSSCCCCHHHHSC
T ss_pred CCCCHHHHHHHHH
Confidence 5777777777753
No 144
>2c6a_A Ubiquitin-protein ligase E3 MDM2; zinc finger, human MDM2, phosphorylation, alternative splicing, metal-binding, nuclear protein, proto- oncogene; NMR {Homo sapiens} SCOP: g.41.11.1 PDB: 2c6b_A
Probab=53.38 E-value=6.8 Score=22.77 Aligned_cols=10 Identities=30% Similarity=1.142 Sum_probs=8.1
Q ss_pred CCCcccCCCC
Q psy11251 43 QYRWQCIECK 52 (190)
Q Consensus 43 ~~~W~C~~C~ 52 (190)
.+-|.|..|.
T Consensus 11 ~D~WkC~~C~ 20 (46)
T 2c6a_A 11 ADYWKCTSCN 20 (46)
T ss_dssp GGCEECTTTC
T ss_pred cceEeccccc
Confidence 3689999986
No 145
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=52.67 E-value=6.7 Score=26.10 Aligned_cols=91 Identities=14% Similarity=0.380 Sum_probs=44.1
Q ss_pred CCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCCCCCcCCC----------CCCCCCccccCccCCcccCCCC
Q psy11251 12 QPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECKCCSVCGT----------SDNDDQLLFCDDCDRGYHMYCL 81 (190)
Q Consensus 12 ~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~~C~~----------~~~~~~ll~C~~C~~~~H~~Cl 81 (190)
.++....|..|++.|-..=. +..-+..-.....+.|+.|..-..-.. ...+.....|..|++.|-..=.
T Consensus 3 ~~~~~~~C~~C~~~f~~~~~-l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~ 81 (124)
T 2dlq_A 3 SGSSGVECPTCHKKFLSKYY-LKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRME 81 (124)
T ss_dssp CCCSSCCCTTTCCCCSSHHH-HHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHH
T ss_pred CCCCCCCCCCCCCcCCCHHH-HHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHH
Confidence 45667889999999852210 000011112234576666541110000 0123455779999888732110
Q ss_pred CC--CCCCCCCCCccCcccccccc
Q psy11251 82 VP--PIQTPPEGSWSCQLCLKEFH 103 (190)
Q Consensus 82 ~p--~l~~~p~~~W~C~~C~~~~~ 103 (190)
.- ...-..+..+.|+.|.....
T Consensus 82 l~~H~~~h~~~~~~~C~~C~~~f~ 105 (124)
T 2dlq_A 82 LRLHMVSHTGEMPYKCSSCSQQFM 105 (124)
T ss_dssp HHHHHHHHSSSCSEECSSSCCEES
T ss_pred HHHHHHHcCCCCCccCCCccchhC
Confidence 00 00001234699999987654
No 146
>1x3h_A Leupaxin; paxillin family, protein-protein interaction, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=52.07 E-value=8.4 Score=24.16 Aligned_cols=25 Identities=24% Similarity=0.506 Sum_probs=11.5
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCC
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYC 80 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~C 80 (190)
.|..|++...+. .| ..-++.||..|
T Consensus 17 ~C~~C~~~I~~~-~v--~a~~~~~H~~C 41 (80)
T 1x3h_A 17 KCGGCNRPVLEN-YL--SAMDTVWHPEC 41 (80)
T ss_dssp BCTTTCCBCCSS-CE--EETTEEECTTT
T ss_pred ccccCCCeecce-eE--EECCCeEecCc
Confidence 355555544332 22 23345666555
No 147
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=51.05 E-value=3.2 Score=29.08 Aligned_cols=19 Identities=21% Similarity=0.284 Sum_probs=0.0
Q ss_pred eecCCCCCCCCCCCCCCCc
Q psy11251 17 VSCSDCGRSGHPTCLQFTN 35 (190)
Q Consensus 17 l~C~~C~~~~H~~Cl~~~~ 35 (190)
+.-..|+..||..|+..+.
T Consensus 79 v~~~~C~H~FH~~CI~~Wl 97 (117)
T 4a0k_B 79 VAWGVCNHAFHFHCISRWL 97 (117)
T ss_dssp -------------------
T ss_pred cccCCcCceEcHHHHHHHH
Confidence 3334799999999997654
No 148
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=50.19 E-value=2.1 Score=27.53 Aligned_cols=29 Identities=21% Similarity=0.745 Sum_probs=21.4
Q ss_pred CccCCcccCCCCCCCCCCCCCCCccCccccccc
Q psy11251 70 DDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEF 102 (190)
Q Consensus 70 ~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 102 (190)
..|.-.||..|+..=+... -.||.|+...
T Consensus 46 ~~C~H~FH~~Ci~~Wl~~~----~~CP~CR~~~ 74 (81)
T 2ecl_A 46 GECNHSFHNCCMSLWVKQN----NRCPLCQQDW 74 (81)
T ss_dssp ETTSCEEEHHHHHHHTTTC----CBCTTTCCBC
T ss_pred CCCCCccChHHHHHHHHhC----CCCCCcCCCc
Confidence 3699999999988644332 2899998764
No 149
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=49.21 E-value=7.8 Score=22.48 Aligned_cols=12 Identities=25% Similarity=0.841 Sum_probs=9.4
Q ss_pred CCccCccccccc
Q psy11251 91 GSWSCQLCLKEF 102 (190)
Q Consensus 91 ~~W~C~~C~~~~ 102 (190)
.+|.||.|....
T Consensus 29 ~dw~CP~Cg~~k 40 (46)
T 6rxn_A 29 DDWCCPVCGVSK 40 (46)
T ss_dssp TTCBCTTTCCBG
T ss_pred CCCcCcCCCCcH
Confidence 469999998653
No 150
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=47.99 E-value=8.9 Score=22.46 Aligned_cols=29 Identities=28% Similarity=0.557 Sum_probs=23.3
Q ss_pred CCCCcCCCCCCCCCccccCccCCcccCCCCC
Q psy11251 52 KCCSVCGTSDNDDQLLFCDDCDRGYHMYCLV 82 (190)
Q Consensus 52 ~~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~ 82 (190)
.+|..|++..-.| +.|..|.--.|..|..
T Consensus 15 t~C~~C~k~i~~G--~kC~~Ck~~cH~kC~~ 43 (49)
T 1kbe_A 15 QVCNVCQKSMIFG--VKCKHCRLKCHNKCTK 43 (49)
T ss_dssp CCCSSSCCSSCCE--EEETTTTEEESSSCTT
T ss_pred cCccccCceeECc--CCCCCCCCccchhhcC
Confidence 4778888765444 7899999999999976
No 151
>2cuq_A Four and A half LIM domains 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=47.76 E-value=21 Score=22.22 Aligned_cols=26 Identities=23% Similarity=0.455 Sum_probs=12.0
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCC
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCL 81 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl 81 (190)
.|..|++...+. .|. .=++.||..|.
T Consensus 17 ~C~~C~~~I~~~-~v~--a~~~~~H~~CF 42 (80)
T 2cuq_A 17 RCARCSKTLTQG-GVT--YRDQPWHRECL 42 (80)
T ss_dssp CCTTTCCCCCSC-CEE--SSSSEECTTTC
T ss_pred cCCCCCCEecCc-EEE--ECCchhhhhhC
Confidence 355555554332 221 33456665553
No 152
>3gj3_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1 PDB: 2gqe_A
Probab=47.72 E-value=10 Score=20.38 Aligned_cols=24 Identities=29% Similarity=0.753 Sum_probs=13.2
Q ss_pred CCCcccCCCCCCCcCCCCCCCCCccccCccC
Q psy11251 43 QYRWQCIECKCCSVCGTSDNDDQLLFCDDCD 73 (190)
Q Consensus 43 ~~~W~C~~C~~C~~C~~~~~~~~ll~C~~C~ 73 (190)
.+.|.|+.|. += +....+.|+.|.
T Consensus 5 ~g~W~C~~C~---~~----N~~~~~kC~aC~ 28 (33)
T 3gj3_B 5 SGTWDCDTCL---VQ----NKPEAVKCVACE 28 (33)
T ss_dssp -CCEECTTTC---CE----ECTTCSBCTTTC
T ss_pred CCceeCCccc---CC----CccccCEEcccC
Confidence 6789777764 11 234455566664
No 153
>1zfo_A LAsp-1; LIM domain, zinc-finger, metal-binding protein; NMR {Sus scrofa} SCOP: g.39.1.4
Probab=47.37 E-value=9 Score=19.94 Aligned_cols=26 Identities=27% Similarity=0.593 Sum_probs=14.3
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCC
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYC 80 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~C 80 (190)
.|..|++..-..+.+..+ ++.||..|
T Consensus 5 ~C~~C~k~Vy~~Ek~~~~--g~~~Hk~C 30 (31)
T 1zfo_A 5 NCARCGKIVYPTEKVNCL--DKFWHKAC 30 (31)
T ss_dssp BCSSSCSBCCGGGCCCSS--SSCCCGGG
T ss_pred cCCccCCEEecceeEEEC--CeEecccC
Confidence 456666655444444433 46777666
No 154
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=47.12 E-value=22 Score=20.99 Aligned_cols=35 Identities=20% Similarity=0.413 Sum_probs=18.9
Q ss_pred eecCCCCCCCCCCCCCC----Cccc-ccccCCCCcccCCCC
Q psy11251 17 VSCSDCGRSGHPTCLQF----TNNM-KVSVKQYRWQCIECK 52 (190)
Q Consensus 17 l~C~~C~~~~H~~Cl~~----~~~~-~~~~~~~~W~C~~C~ 52 (190)
-.|..|+-.|-..=-++ ++.. .+.+ ..+|.||.|.
T Consensus 4 y~C~~CGyvYd~~~Gdp~~gi~pGt~f~~l-P~dw~CP~Cg 43 (52)
T 1e8j_A 4 YVCTVCGYEYDPAKGDPDSGIKPGTKFEDL-PDDWACPVCG 43 (52)
T ss_dssp EECSSSCCCCCTTTCCTTTTCCSSCCTTSS-CTTCCCSSSC
T ss_pred EEeCCCCeEEcCCcCCcccCcCCCCchHHC-CCCCcCCCCC
Confidence 46888988876433221 1111 1223 4589887773
No 155
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=47.01 E-value=26 Score=20.33 Aligned_cols=40 Identities=23% Similarity=0.547 Sum_probs=21.7
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 102 (190)
.|.+|...-....++ .|.-.|+..|+.. ....||.|+...
T Consensus 8 ~C~IC~~~~~~p~~l---~CgH~fC~~Ci~~-------~~~~CP~Cr~~~ 47 (56)
T 1bor_A 8 RCQQCQAEAKCPKLL---PCLHTLCSGCLEA-------SGMQCPICQAPW 47 (56)
T ss_dssp SCSSSCSSCBCCSCS---TTSCCSBTTTCSS-------SSSSCSSCCSSS
T ss_pred CceEeCCccCCeEEc---CCCCcccHHHHcc-------CCCCCCcCCcEe
Confidence 355555433233333 3555677777653 244788887654
No 156
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.73 E-value=0.84 Score=28.62 Aligned_cols=47 Identities=23% Similarity=0.444 Sum_probs=27.7
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCcccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEFH 103 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 103 (190)
.|.+|.........+.--.|.-.||..|+..-+.. ...||.|+....
T Consensus 17 ~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~----~~~CP~Cr~~~~ 63 (74)
T 2ep4_A 17 LCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEV----RKVCPLCNMPVL 63 (74)
T ss_dssp BCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHH----CSBCTTTCCBCS
T ss_pred CCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHc----CCcCCCcCcccc
Confidence 56677654333333322257888999998743222 137999987653
No 157
>4cpa_I Metallocarboxypeptidase inhibitor; hydrolase (C-terminal peptidase); 2.50A {Solanum tuberosum} SCOP: g.3.2.1 PDB: 1h20_A
Probab=46.48 E-value=13 Score=20.15 Aligned_cols=25 Identities=28% Similarity=0.592 Sum_probs=15.9
Q ss_pred ccCCCCCCCCC-CCCCCCccCccccc
Q psy11251 76 YHMYCLVPPIQ-TPPEGSWSCQLCLK 100 (190)
Q Consensus 76 ~H~~Cl~p~l~-~~p~~~W~C~~C~~ 100 (190)
|...|..|-.+ ..-++.|+|..|-+
T Consensus 4 yD~~C~KPC~T~DDCS~gw~CqaC~n 29 (38)
T 4cpa_I 4 ADPICNKPCKTHDDCSGAWFCQACWN 29 (38)
T ss_dssp SCTTTTCBCSSSSSSCCCSSCCEEET
T ss_pred cccccCCCccCccccccchHHHHHHh
Confidence 45556666322 23357999999975
No 158
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=46.45 E-value=9.1 Score=22.15 Aligned_cols=28 Identities=21% Similarity=0.567 Sum_probs=21.6
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCC
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLV 82 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~ 82 (190)
+|..|++..- +-+.|..|....|..|..
T Consensus 16 ~C~~C~~~l~--qG~~C~~C~~~~H~~C~~ 43 (52)
T 1faq_A 16 FCDICQKFLL--NGFRCQTCGYKFHEHCST 43 (52)
T ss_dssp ECTTSSSEEC--SEEECTTTTCCBCSTTSS
T ss_pred CCCCcccccc--cCCEeCCCCCeEChhHHh
Confidence 4667765432 568899999999999987
No 159
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=46.20 E-value=4.6 Score=26.99 Aligned_cols=44 Identities=23% Similarity=0.616 Sum_probs=26.5
Q ss_pred CCCccCCCCCCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCC
Q psy11251 3 CPTQAEKSGQPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECK 52 (190)
Q Consensus 3 C~~~~~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 52 (190)
|+-.=+...+|+-++.|..|.-..--.|... ..++++-.||.|+
T Consensus 22 CGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEY------ErkeG~q~CpqCk 65 (93)
T 1weo_A 22 CGDQIGLTVEGDLFVACNECGFPACRPCYEY------ERREGTQNCPQCK 65 (93)
T ss_dssp SCCBCCBCSSSSBCCSCSSSCCCCCHHHHHH------HHHTSCSSCTTTC
T ss_pred ccCccccCCCCCEEEeeeccCChhhHHHHHH------HHhccCccccccC
Confidence 4444455666777777777776666566532 2335666666664
No 160
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=46.13 E-value=0.9 Score=30.02 Aligned_cols=46 Identities=24% Similarity=0.541 Sum_probs=27.9
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 102 (190)
.|.+|......+..+.--.|.-.||..|+..-+.. .-.||.|+...
T Consensus 42 ~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~----~~~CP~Cr~~~ 87 (91)
T 2l0b_A 42 CCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQK----SGTCPVCRCMF 87 (91)
T ss_dssp EETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTT----TCBCTTTCCBS
T ss_pred CCcccChhhcCCCcEEecCCCChHHHHHHHHHHHc----CCcCcCcCccC
Confidence 46677643333333333448889999998753322 23799998653
No 161
>2ebr_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.30 E-value=16 Score=21.27 Aligned_cols=11 Identities=27% Similarity=0.794 Sum_probs=8.1
Q ss_pred cCCCCcccCCC
Q psy11251 41 VKQYRWQCIEC 51 (190)
Q Consensus 41 ~~~~~W~C~~C 51 (190)
.+.+.|.|..|
T Consensus 7 ~~~gsW~C~~C 17 (47)
T 2ebr_A 7 GPEGSWDCELC 17 (47)
T ss_dssp SCCSSCCCSSS
T ss_pred CCCCeeECCee
Confidence 45789977666
No 162
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=45.25 E-value=15 Score=23.36 Aligned_cols=38 Identities=18% Similarity=0.274 Sum_probs=17.5
Q ss_pred CCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCCCCCcCCC
Q psy11251 14 EDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECKCCSVCGT 59 (190)
Q Consensus 14 ~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~~C~~ 59 (190)
+....|..|++.... .+.+. +....|+ ++|-.|..|+.
T Consensus 13 ~~~~~C~~C~~~I~~------~e~v~-a~~~~wH-~~CF~C~~C~~ 50 (82)
T 2co8_A 13 GAGDLCALCGEHLYV------LERLC-VNGHFFH-RSCFRCHTCEA 50 (82)
T ss_dssp CSSCBCSSSCCBCCT------TTBCC-BTTBCCB-TTTCBCSSSCC
T ss_pred CCCCCCcccCCCccc------ceEEE-ECCCeeC-CCcCEEcCCCC
Confidence 344556666665431 11111 2233454 55656666654
No 163
>2crc_A Ubiquitin conjugating enzyme 7 interacting protein 3; ZF-ranbp domain, hepatitis B virus X-associated protein 4, HBV associated factor 4; NMR {Homo sapiens}
Probab=44.79 E-value=21 Score=21.17 Aligned_cols=10 Identities=40% Similarity=1.142 Sum_probs=7.9
Q ss_pred CCCcccCCCC
Q psy11251 43 QYRWQCIECK 52 (190)
Q Consensus 43 ~~~W~C~~C~ 52 (190)
+..|.|+.|.
T Consensus 8 ~~~W~Cp~CT 17 (52)
T 2crc_A 8 PVGWQCPGCT 17 (52)
T ss_dssp SSSBCCTTTC
T ss_pred CCCccCCCcc
Confidence 4489999986
No 164
>3gj5_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1
Probab=44.68 E-value=11 Score=20.39 Aligned_cols=25 Identities=24% Similarity=0.583 Sum_probs=12.7
Q ss_pred CCCCcccCCCCCCCcCCCCCCCCCccccCccC
Q psy11251 42 KQYRWQCIECKCCSVCGTSDNDDQLLFCDDCD 73 (190)
Q Consensus 42 ~~~~W~C~~C~~C~~C~~~~~~~~ll~C~~C~ 73 (190)
..+.|.|..|. +=+ ....+.|..|+
T Consensus 4 ~~G~W~C~~C~---v~N----~~~~~kC~aCe 28 (34)
T 3gj5_B 4 GSGSWDCEVCL---VQN----KADSTKCIACE 28 (34)
T ss_dssp --CCEECTTTC---CEE----CSSCSBCTTTC
T ss_pred CCCceECCeeE---eEC----ccccCEEcccC
Confidence 47899776663 222 33445565554
No 165
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=43.30 E-value=8 Score=26.21 Aligned_cols=45 Identities=18% Similarity=0.509 Sum_probs=27.8
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCcccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEFH 103 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 103 (190)
.|.+|...-.....+ .|+-.|+..|+..-+. .+...||.|.....
T Consensus 17 ~C~iC~~~~~~p~~~---~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~~ 61 (115)
T 3l11_A 17 QCGICMEILVEPVTL---PCNHTLCKPCFQSTVE---KASLCCPFCRRRVS 61 (115)
T ss_dssp BCTTTCSBCSSCEEC---TTSCEECHHHHCCCCC---TTTSBCTTTCCBCH
T ss_pred CCccCCcccCceeEc---CCCCHHhHHHHHHHHh---HCcCCCCCCCcccC
Confidence 455665432222223 6777888889875432 34578999987654
No 166
>1x6a_A LIMK-2, LIM domain kinase 2; LIM-kinase 2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=43.02 E-value=30 Score=21.51 Aligned_cols=26 Identities=19% Similarity=0.428 Sum_probs=11.5
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCC
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCL 81 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl 81 (190)
.|..|++... +..+ ..-++.||..|.
T Consensus 17 ~C~~C~~~I~-~~~~--~a~~~~~H~~CF 42 (81)
T 1x6a_A 17 FCHGCSLLMT-GPFM--VAGEFKYHPECF 42 (81)
T ss_dssp BCTTTCCBCC-SCCB--CCTTCCBCTTSC
T ss_pred cCccCCCCcC-ceEE--EECCceeccccC
Confidence 3555555443 2222 122455665553
No 167
>2yrc_A Protein transport protein SEC23A; zinc binding, copii, coat protein complex-II, endoplasmic reticulum, golgi, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yrd_A
Probab=41.43 E-value=16 Score=22.21 Aligned_cols=37 Identities=32% Similarity=0.687 Sum_probs=25.4
Q ss_pred CCCCCCCCceecCC--CCCCCCCCCCCCCcccccccCCCCcccCCC
Q psy11251 8 EKSGQPEDLVSCSD--CGRSGHPTCLQFTNNMKVSVKQYRWQCIEC 51 (190)
Q Consensus 8 ~~~g~~~~ll~C~~--C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C 51 (190)
+++|.....+.|.. |..-.-++|- -......|.|+-|
T Consensus 1 ~~~~~~~~pvRC~r~~CraylNP~~~-------~~~~~~~W~C~~C 39 (59)
T 2yrc_A 1 GSSGSSGEPVLCSRTTCRAVLNPLCQ-------VDYRAKLWACNFC 39 (59)
T ss_dssp CCCSSCCCCCBCSCTTTCCBCCTTSE-------EEGGGTEEECSSS
T ss_pred CCccCCCCCcccCCCCCCeEECCceE-------EECCCCEEEcccC
Confidence 35677888999987 9888776663 1122457977766
No 168
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=41.36 E-value=6.6 Score=25.98 Aligned_cols=31 Identities=26% Similarity=0.623 Sum_probs=24.5
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCC
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPP 84 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~ 84 (190)
.|.+|++.. .+..-.|..|+-..|..|...|
T Consensus 49 ~C~~C~~~~-~~~~Y~C~~C~f~lH~~Ca~~p 79 (89)
T 1v5n_A 49 TCDKCEEEG-TIWSYHCDECDFDLHAKCALNE 79 (89)
T ss_dssp CCTTTSCCC-CSCEEECTTTCCCCCHHHHHCS
T ss_pred EeCCCCCcC-CCcEEEcCCCCCeEcHHhcCCC
Confidence 577787653 4677889999999999998644
No 169
>2cr8_A MDM4 protein; ZF-ranbp domain, P53-binding protein MDM4, MDM2-like P53-binding DE protein, MDMX protein, double minute 4 protein; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=41.22 E-value=12 Score=22.16 Aligned_cols=11 Identities=55% Similarity=1.377 Sum_probs=8.6
Q ss_pred CCCCcccCCCC
Q psy11251 42 KQYRWQCIECK 52 (190)
Q Consensus 42 ~~~~W~C~~C~ 52 (190)
.+.-|.|+.|+
T Consensus 8 ~eD~WkC~~C~ 18 (53)
T 2cr8_A 8 SEDEWQCTECK 18 (53)
T ss_dssp CSCCEECSSSC
T ss_pred Ccceeeccccc
Confidence 46689988885
No 170
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=40.47 E-value=20 Score=32.07 Aligned_cols=70 Identities=20% Similarity=0.399 Sum_probs=25.5
Q ss_pred CCCceecCCCCCCCCCCCCCCCccc----cc------ccCCCCccc---CCCCCCCcCCCCCC--CCCccccCccCCccc
Q psy11251 13 PEDLVSCSDCGRSGHPTCLQFTNNM----KV------SVKQYRWQC---IECKCCSVCGTSDN--DDQLLFCDDCDRGYH 77 (190)
Q Consensus 13 ~~~ll~C~~C~~~~H~~Cl~~~~~~----~~------~~~~~~W~C---~~C~~C~~C~~~~~--~~~ll~C~~C~~~~H 77 (190)
+-.=+.|..|+-..|..|...-+.. .. ....-.|.= ..-.+|..|++... ...-+.|..|...+|
T Consensus 62 ~~qg~~C~~C~~~~H~~C~~~v~~~c~~~~~~~~~~~~~~~h~~~~~~~~~~~~C~~C~~~l~g~~~qg~~C~~C~~~~H 141 (674)
T 3pfq_A 62 GKQGFQCQVCSFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKIHTYSSPTFCDHCGSLLYGLIHQGMKCDTCMMNVH 141 (674)
T ss_dssp ----------------------------------------CCCCCEECCSSCCCCSSSCSCCBBSSSCEECCSSSCCCBC
T ss_pred CCceeECCCCCCCcChhhcCcCcccCCCcccccccccccCCcceeecCCCCCCCCCccccccchhhcCccccccCCcchh
Confidence 3455779999999999998632110 00 000112321 22347788876422 235688999999999
Q ss_pred CCCCC
Q psy11251 78 MYCLV 82 (190)
Q Consensus 78 ~~Cl~ 82 (190)
..|..
T Consensus 142 ~~C~~ 146 (674)
T 3pfq_A 142 KRCVM 146 (674)
T ss_dssp SSTTS
T ss_pred hhhhh
Confidence 99975
No 171
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.25 E-value=13 Score=18.58 Aligned_cols=17 Identities=18% Similarity=0.573 Sum_probs=11.6
Q ss_pred CCCCCceecCCCCCCCC
Q psy11251 11 GQPEDLVSCSDCGRSGH 27 (190)
Q Consensus 11 g~~~~ll~C~~C~~~~H 27 (190)
..++....|+.|++.|-
T Consensus 4 ~~~~k~~~C~~C~k~f~ 20 (36)
T 2els_A 4 GSSGKIFTCEYCNKVFK 20 (36)
T ss_dssp TSCCCCEECTTTCCEES
T ss_pred CCCCCCEECCCCCceeC
Confidence 44556677888887764
No 172
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.24 E-value=36 Score=21.17 Aligned_cols=15 Identities=20% Similarity=0.578 Sum_probs=7.0
Q ss_pred CCcccCCCCCCCcCCC
Q psy11251 44 YRWQCIECKCCSVCGT 59 (190)
Q Consensus 44 ~~W~C~~C~~C~~C~~ 59 (190)
..|+ ++|-.|..|++
T Consensus 37 ~~~H-~~CF~C~~C~~ 51 (82)
T 2ehe_A 37 RHFH-EGCFRCCRCQR 51 (82)
T ss_dssp CCCB-TTTSBCTTTCC
T ss_pred cccc-ccCCeecCCCC
Confidence 3443 44545555543
No 173
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=38.76 E-value=42 Score=21.07 Aligned_cols=13 Identities=23% Similarity=0.549 Sum_probs=10.2
Q ss_pred CCccCcccccccc
Q psy11251 91 GSWSCQLCLKEFH 103 (190)
Q Consensus 91 ~~W~C~~C~~~~~ 103 (190)
.+|.||.|.....
T Consensus 39 ddw~CP~Cga~K~ 51 (70)
T 1dx8_A 39 DSFMCPACRSPKN 51 (70)
T ss_dssp TTCBCTTTCCBGG
T ss_pred CCCcCCCCCCCHH
Confidence 4799999987543
No 174
>2ebq_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.08 E-value=24 Score=20.53 Aligned_cols=13 Identities=31% Similarity=0.596 Sum_probs=9.5
Q ss_pred ccCCCCcccCCCC
Q psy11251 40 SVKQYRWQCIECK 52 (190)
Q Consensus 40 ~~~~~~W~C~~C~ 52 (190)
..+.+.|.|..|.
T Consensus 6 ~~~~g~W~C~~C~ 18 (47)
T 2ebq_A 6 SGVIGTWDCDTCL 18 (47)
T ss_dssp CCCSSSEECSSSC
T ss_pred CCCCCceECCeee
Confidence 4557899887774
No 175
>3gj8_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.82A {Rattus norvegicus} PDB: 3gj4_B*
Probab=36.82 E-value=16 Score=24.23 Aligned_cols=11 Identities=27% Similarity=0.857 Sum_probs=7.6
Q ss_pred CCCCcccCCCC
Q psy11251 42 KQYRWQCIECK 52 (190)
Q Consensus 42 ~~~~W~C~~C~ 52 (190)
+.++|.|+.|.
T Consensus 62 ~~g~W~C~~C~ 72 (92)
T 3gj8_B 62 PEGSWDCEVCL 72 (92)
T ss_dssp --CCEECTTTC
T ss_pred CCCcccCCcCC
Confidence 57899988774
No 176
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=36.55 E-value=11 Score=25.45 Aligned_cols=16 Identities=25% Similarity=0.465 Sum_probs=12.4
Q ss_pred cCCCCCCCCCCCCCCC
Q psy11251 19 CSDCGRSGHPTCLQFT 34 (190)
Q Consensus 19 C~~C~~~~H~~Cl~~~ 34 (190)
-..|+..||..|+..+
T Consensus 58 ~~~C~H~Fh~~Ci~~w 73 (114)
T 1v87_A 58 LTKCSHAFHLLCLLAM 73 (114)
T ss_dssp ESSSCCEECHHHHHHH
T ss_pred cCCCCCcccHHHHHHH
Confidence 4568999999998643
No 177
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=35.96 E-value=25 Score=21.38 Aligned_cols=30 Identities=37% Similarity=0.624 Sum_probs=22.3
Q ss_pred CCCcCCCCCC--CCCccccCccCCcccCCCCC
Q psy11251 53 CCSVCGTSDN--DDQLLFCDDCDRGYHMYCLV 82 (190)
Q Consensus 53 ~C~~C~~~~~--~~~ll~C~~C~~~~H~~Cl~ 82 (190)
+|..|++..- ..+-+.|..|....|..|..
T Consensus 25 ~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~ 56 (65)
T 2enz_A 25 FCEHCGTLLWGLARQGLKCDACGMNVHHRCQT 56 (65)
T ss_dssp BCSSSCCBCCCSSSCSEEESSSCCEECTTTTT
T ss_pred CchhcChhheecCCcccccCCCCCccCHhHHh
Confidence 4666765432 24668899999999999986
No 178
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=35.80 E-value=11 Score=25.11 Aligned_cols=47 Identities=19% Similarity=0.578 Sum_probs=27.2
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCcccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEFH 103 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 103 (190)
.|.+|...-....++ .|+-.||..|+..-+.. ..+...||.|.....
T Consensus 23 ~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~-~~~~~~CP~Cr~~~~ 69 (112)
T 1jm7_A 23 ECPICLELIKEPVST---KCDHIFCKFCMLKLLNQ-KKGPSQCPLCKNDIT 69 (112)
T ss_dssp SCSSSCCCCSSCCBC---TTSCCCCSHHHHHHHHS-SSSSCCCTTTSCCCC
T ss_pred CCcccChhhcCeEEC---CCCCHHHHHHHHHHHHh-CCCCCCCcCCCCcCC
Confidence 456666433222222 57778888887643222 124578999987543
No 179
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=35.26 E-value=20 Score=23.20 Aligned_cols=18 Identities=17% Similarity=0.504 Sum_probs=9.6
Q ss_pred CccccCccCCcccCCCCC
Q psy11251 65 QLLFCDDCDRGYHMYCLV 82 (190)
Q Consensus 65 ~ll~C~~C~~~~H~~Cl~ 82 (190)
..+.|..|...|=+.|..
T Consensus 42 ~~v~C~~C~~~FC~~C~~ 59 (86)
T 2ct7_A 42 LEATCPQCHQTFCVRCKR 59 (86)
T ss_dssp SCEECTTTCCEECSSSCS
T ss_pred CceEeCCCCCccccccCC
Confidence 335566665555555544
No 180
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=34.81 E-value=18 Score=22.76 Aligned_cols=29 Identities=31% Similarity=0.653 Sum_probs=21.8
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCC
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLV 82 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~ 82 (190)
+|..|+... ..+-+.|..|.-..|..|..
T Consensus 37 ~C~~C~~~l-~~qG~kC~~C~~~cHkkC~~ 65 (72)
T 2fnf_X 37 WCDLCGREV-LRQALRCANCKFTCHSECRS 65 (72)
T ss_dssp BCTTTSSBC-SSCCEECTTSSCEECTGGGG
T ss_pred chhhhhHHH-HhCcCccCCCCCeechhhhc
Confidence 356666554 45668899999999999975
No 181
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=34.79 E-value=20 Score=21.44 Aligned_cols=12 Identities=33% Similarity=0.844 Sum_probs=9.6
Q ss_pred CCccCccccccc
Q psy11251 91 GSWSCQLCLKEF 102 (190)
Q Consensus 91 ~~W~C~~C~~~~ 102 (190)
.+|.||.|-...
T Consensus 35 ~dw~CP~Cg~~K 46 (54)
T 4rxn_A 35 DDWVCPLCGVGK 46 (54)
T ss_dssp TTCBCTTTCCBG
T ss_pred CCCcCcCCCCcH
Confidence 479999998753
No 182
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=34.61 E-value=15 Score=22.69 Aligned_cols=15 Identities=27% Similarity=0.784 Sum_probs=7.9
Q ss_pred CCcccCCCCCCCcCCC
Q psy11251 44 YRWQCIECKCCSVCGT 59 (190)
Q Consensus 44 ~~W~C~~C~~C~~C~~ 59 (190)
..|+ ++|-.|..|+.
T Consensus 30 ~~~H-~~CF~C~~C~~ 44 (76)
T 2cu8_A 30 KDWH-KFCLKCERCSK 44 (76)
T ss_dssp EEEE-TTTCBCSSSCC
T ss_pred eEee-CCCCCCCCCCC
Confidence 3453 55555555554
No 183
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=34.13 E-value=39 Score=20.96 Aligned_cols=9 Identities=22% Similarity=0.593 Sum_probs=4.6
Q ss_pred CCcccCCCC
Q psy11251 73 DRGYHMYCL 81 (190)
Q Consensus 73 ~~~~H~~Cl 81 (190)
++.||..|.
T Consensus 36 ~~~~H~~CF 44 (82)
T 1x63_A 36 GTVWHKDCF 44 (82)
T ss_dssp SCEEETTTC
T ss_pred ccccccccC
Confidence 445555543
No 184
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=33.19 E-value=2 Score=29.54 Aligned_cols=19 Identities=21% Similarity=0.314 Sum_probs=13.7
Q ss_pred ceecCCCCCCCCCCCCCCC
Q psy11251 16 LVSCSDCGRSGHPTCLQFT 34 (190)
Q Consensus 16 ll~C~~C~~~~H~~Cl~~~ 34 (190)
.+.-..|+..||..|+..+
T Consensus 67 ~~~~~~C~H~FH~~Ci~~W 85 (106)
T 3dpl_R 67 TVAWGVCNHAFHFHCISRW 85 (106)
T ss_dssp CEEEETTSCEEEHHHHHHH
T ss_pred eEeecccCcEECHHHHHHH
Confidence 3444579999999998643
No 185
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.88 E-value=28 Score=17.07 Aligned_cols=15 Identities=20% Similarity=0.445 Sum_probs=9.6
Q ss_pred CCCceecCCCCCCCC
Q psy11251 13 PEDLVSCSDCGRSGH 27 (190)
Q Consensus 13 ~~~ll~C~~C~~~~H 27 (190)
++....|+.|++.|-
T Consensus 6 ~~~~~~C~~C~k~f~ 20 (36)
T 2elr_A 6 SGKTHLCDMCGKKFK 20 (36)
T ss_dssp CCSSCBCTTTCCBCS
T ss_pred CCCCeecCcCCCCcC
Confidence 445566777777763
No 186
>3b08_B Ranbp-type and C3HC4-type zinc finger-containing; protein complex, signaling protein-metal binding protein COM; HET: TRE; 1.70A {Mus musculus} PDB: 3b0a_B*
Probab=32.50 E-value=32 Score=21.35 Aligned_cols=10 Identities=40% Similarity=1.142 Sum_probs=7.8
Q ss_pred CCCcccCCCC
Q psy11251 43 QYRWQCIECK 52 (190)
Q Consensus 43 ~~~W~C~~C~ 52 (190)
...|.|+.|.
T Consensus 6 ~~~W~CP~CT 15 (64)
T 3b08_B 6 PVGWQCPGCT 15 (64)
T ss_dssp CCSEECTTTC
T ss_pred CCCCcCCCcc
Confidence 4589999885
No 187
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=32.42 E-value=36 Score=20.87 Aligned_cols=8 Identities=38% Similarity=1.182 Sum_probs=4.2
Q ss_pred CCcccCCC
Q psy11251 73 DRGYHMYC 80 (190)
Q Consensus 73 ~~~~H~~C 80 (190)
++.||..|
T Consensus 39 ~~~~H~~C 46 (77)
T 2egq_A 39 GQSWHDYC 46 (77)
T ss_dssp TEEEETTT
T ss_pred cceeCccc
Confidence 44555555
No 188
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=32.41 E-value=5.9 Score=24.08 Aligned_cols=48 Identities=19% Similarity=0.455 Sum_probs=27.9
Q ss_pred CCCcCCCCCCCCCcccc--CccCCcccCCCCCCCCCCCCCCCccCccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFC--DDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C--~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 102 (190)
.|.+|....++..+.-| .+.-+.||..|+..=+.. ++.+.|+.|...+
T Consensus 8 ~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W~~~--~~~~~C~~C~~~~ 57 (60)
T 1vyx_A 8 VCWICNEELGNERFRACGCTGELENVHRSCLSTWLTI--SRNTACQICGVVY 57 (60)
T ss_dssp EETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHH--HTCSBCTTTCCBC
T ss_pred EeEEeecCCCCceecCcCCCCchhhhHHHHHHHHHHh--CCCCccCCCCCee
Confidence 45666543333333443 334459999998753221 2468899998654
No 189
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.31 E-value=8.2 Score=22.35 Aligned_cols=42 Identities=21% Similarity=0.623 Sum_probs=19.7
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLC 98 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C 98 (190)
.|.+|...-....++ .|.-.||..|+..-+... .....||.|
T Consensus 17 ~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~~-~~~~~CP~C 58 (58)
T 2ecj_A 17 SCSVCLEYLKEPVII---ECGHNFCKACITRWWEDL-ERDFPCPVC 58 (58)
T ss_dssp BCSSSCCBCSSCCCC---SSCCCCCHHHHHHHTTSS-CCSCCCSCC
T ss_pred CCccCCcccCccEeC---CCCCccCHHHHHHHHHhc-CCCCCCCCC
Confidence 455665433222222 466667777765432211 234456654
No 190
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.99 E-value=4.1 Score=24.68 Aligned_cols=29 Identities=17% Similarity=0.572 Sum_probs=19.5
Q ss_pred ccCCcccCCCCCCCCCCCCCCCccCccccccc
Q psy11251 71 DCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEF 102 (190)
Q Consensus 71 ~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 102 (190)
.|+-.||..|+..-+. .+...||.|....
T Consensus 32 ~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~ 60 (66)
T 2ecy_A 32 ECGHRFCESCMAALLS---SSSPKCTACQESI 60 (66)
T ss_dssp SSSCCCCHHHHHHHHT---TSSCCCTTTCCCC
T ss_pred CCCCHHHHHHHHHHHH---hCcCCCCCCCcCC
Confidence 6777788888764332 3455799988654
No 191
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.43 E-value=4.7 Score=24.78 Aligned_cols=46 Identities=22% Similarity=0.571 Sum_probs=27.3
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 102 (190)
.|.+|........++ .|+-.||..|+..-+.. ..+.-.||.|....
T Consensus 22 ~C~IC~~~~~~~~~~---~CgH~fC~~Ci~~~~~~-~~~~~~CP~Cr~~~ 67 (73)
T 2ysl_A 22 ICPICLDILQKPVTI---DCGHNFCLKCITQIGET-SCGFFKCPLCKTSV 67 (73)
T ss_dssp BCTTTCSBCSSEEEC---TTCCEEEHHHHHHHCSS-SCSCCCCSSSCCCC
T ss_pred EeccCCcccCCeEEc---CCCChhhHHHHHHHHHc-CCCCCCCCCCCCcC
Confidence 456666432222222 68878888888754331 23456899998754
No 192
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=31.07 E-value=24 Score=22.72 Aligned_cols=10 Identities=50% Similarity=1.155 Sum_probs=4.6
Q ss_pred CCCCCCCcCC
Q psy11251 49 IECKCCSVCG 58 (190)
Q Consensus 49 ~~C~~C~~C~ 58 (190)
++|-.|..|+
T Consensus 40 ~~CF~C~~C~ 49 (91)
T 2d8y_A 40 ISCFRCSYCN 49 (91)
T ss_dssp TTTCBCTTTC
T ss_pred CCCCeeCCCC
Confidence 4444444444
No 193
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=30.97 E-value=14 Score=22.83 Aligned_cols=14 Identities=36% Similarity=1.118 Sum_probs=7.3
Q ss_pred CcccCCCCCCCcCCC
Q psy11251 45 RWQCIECKCCSVCGT 59 (190)
Q Consensus 45 ~W~C~~C~~C~~C~~ 59 (190)
.|+ ++|-.|..|++
T Consensus 22 ~~H-~~CF~C~~C~~ 35 (76)
T 1iml_A 22 DWH-RPCLKCEKCGK 35 (76)
T ss_dssp EEE-TTTCBCTTTCC
T ss_pred ccc-CCCCCccccCc
Confidence 443 45555555554
No 194
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.85 E-value=31 Score=22.27 Aligned_cols=30 Identities=33% Similarity=0.722 Sum_probs=22.4
Q ss_pred CCCcCCCCCC--CCCccccCccCCcccCCCCC
Q psy11251 53 CCSVCGTSDN--DDQLLFCDDCDRGYHMYCLV 82 (190)
Q Consensus 53 ~C~~C~~~~~--~~~ll~C~~C~~~~H~~Cl~ 82 (190)
+|..|++..- ..+-+.|..|....|..|..
T Consensus 30 ~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~ 61 (85)
T 2eli_A 30 FCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVI 61 (85)
T ss_dssp BCSSSCCBCCCSSSCEEECSSSCCEEETTTTT
T ss_pred CCcccCccccccccCCCcCCCcCCccCHhHHh
Confidence 4666765432 24668899999999999987
No 195
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=30.51 E-value=19 Score=20.66 Aligned_cols=13 Identities=15% Similarity=0.437 Sum_probs=8.6
Q ss_pred CccccCccCCccc
Q psy11251 65 QLLFCDDCDRGYH 77 (190)
Q Consensus 65 ~ll~C~~C~~~~H 77 (190)
..+.|..|+.+|-
T Consensus 23 gelvC~~CG~v~~ 35 (50)
T 1pft_A 23 GEIVCAKCGYVIE 35 (50)
T ss_dssp TEEEESSSCCBCC
T ss_pred CeEECcccCCccc
Confidence 3466777777764
No 196
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=30.47 E-value=44 Score=20.44 Aligned_cols=34 Identities=21% Similarity=0.578 Sum_probs=18.5
Q ss_pred ecCCCCCCCCCCCCCCCcccccccCCCCcccCCCCCCCcCCCC
Q psy11251 18 SCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECKCCSVCGTS 60 (190)
Q Consensus 18 ~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~~C~~~ 60 (190)
.|..|+...-..-+ .+....|+ ++|-.|..|+..
T Consensus 7 ~C~~C~~~I~~~~v--------~a~~~~wH-~~CF~C~~C~~~ 40 (73)
T 1wig_A 7 GCDSCEKYITGRVL--------EAGEKHYH-PSCALCVRCGQM 40 (73)
T ss_dssp SCSSSCCCCSSCCB--------CCSSCCBC-TTTSCCSSSCCC
T ss_pred CcccCCCEecCeeE--------EeCCCCCC-CCcCEeCCCCCC
Confidence 56666666542111 12244665 677777777654
No 197
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.88 E-value=24 Score=17.43 Aligned_cols=16 Identities=25% Similarity=0.368 Sum_probs=10.7
Q ss_pred CCCCceecCCCCCCCC
Q psy11251 12 QPEDLVSCSDCGRSGH 27 (190)
Q Consensus 12 ~~~~ll~C~~C~~~~H 27 (190)
.++....|..|++.|-
T Consensus 5 ~~~k~~~C~~C~k~f~ 20 (36)
T 2elv_A 5 SSGLLYDCHICERKFK 20 (36)
T ss_dssp CCCCCEECSSSCCEES
T ss_pred CCCCCeECCCCCCccC
Confidence 3455667888887764
No 198
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=29.60 E-value=44 Score=21.72 Aligned_cols=23 Identities=22% Similarity=0.624 Sum_probs=11.1
Q ss_pred CCCccCCCCCCCCceecCCCCCC
Q psy11251 3 CPTQAEKSGQPEDLVSCSDCGRS 25 (190)
Q Consensus 3 C~~~~~~~g~~~~ll~C~~C~~~ 25 (190)
|..+...-.-.+....|..|++-
T Consensus 5 CP~C~~~l~~~~~~~~C~~C~~~ 27 (81)
T 2jrp_A 5 CPVCHHALERNGDTAHCETCAKD 27 (81)
T ss_dssp CSSSCSCCEECSSEEECTTTCCE
T ss_pred CCCCCCccccCCCceECcccccc
Confidence 44444333233445567777663
No 199
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=29.54 E-value=39 Score=20.15 Aligned_cols=12 Identities=25% Similarity=0.634 Sum_probs=9.7
Q ss_pred CCccCccccccc
Q psy11251 91 GSWSCQLCLKEF 102 (190)
Q Consensus 91 ~~W~C~~C~~~~ 102 (190)
.+|.||.|....
T Consensus 35 ~dw~CP~Cga~K 46 (55)
T 2v3b_B 35 ADWVCPDCGVGK 46 (55)
T ss_dssp TTCCCTTTCCCG
T ss_pred CCCcCCCCCCCH
Confidence 489999998753
No 200
>2ebv_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.51 E-value=38 Score=20.50 Aligned_cols=27 Identities=22% Similarity=0.513 Sum_probs=16.0
Q ss_pred ccCCCCcccCCCCCCCcCCCCCCCCCccccCccC
Q psy11251 40 SVKQYRWQCIECKCCSVCGTSDNDDQLLFCDDCD 73 (190)
Q Consensus 40 ~~~~~~W~C~~C~~C~~C~~~~~~~~ll~C~~C~ 73 (190)
..+.+.|.|..| .|=+ ....+.|..|.
T Consensus 26 K~~~GsWeC~~C---~V~N----~a~~~kC~ACe 52 (57)
T 2ebv_A 26 KRPIGSWECSVC---CVSN----NAEDNKCVSCM 52 (57)
T ss_dssp CCCSSSCCCSSS---CCCC----CSSCSBCSSSC
T ss_pred CCCCCeeeCCee---EccC----ccCCceeeEcC
Confidence 355789976665 3333 34556666664
No 201
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=29.12 E-value=1.1e+02 Score=19.24 Aligned_cols=40 Identities=20% Similarity=0.479 Sum_probs=19.5
Q ss_pred CCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCCCCCcCCCC
Q psy11251 12 QPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECKCCSVCGTS 60 (190)
Q Consensus 12 ~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~~C~~~ 60 (190)
+......|..|++.....- ..+....|+ ++|-.|..|+..
T Consensus 21 ~~~~~~~C~~C~~~I~~~~--------~~a~~~~~H-~~CF~C~~C~~~ 60 (89)
T 1x64_A 21 SAQRMPLCDKCGSGIVGAV--------VKARDKYRH-PECFVCADCNLN 60 (89)
T ss_dssp CCCSCCBCTTTCCBCCSCC--------EESSSCEEC-TTTCCCSSSCCC
T ss_pred CCCcCCCcccCCCEecccE--------EEECCceEC-ccCCEecCCCCC
Confidence 4445556666666554211 112234453 555556666543
No 202
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.88 E-value=25 Score=17.27 Aligned_cols=16 Identities=13% Similarity=0.430 Sum_probs=10.5
Q ss_pred CCCCceecCCCCCCCC
Q psy11251 12 QPEDLVSCSDCGRSGH 27 (190)
Q Consensus 12 ~~~~ll~C~~C~~~~H 27 (190)
.++....|..|++.|-
T Consensus 5 ~~~k~~~C~~C~k~f~ 20 (36)
T 2elt_A 5 SSGKPYKCPQCSYASA 20 (36)
T ss_dssp CCCCSEECSSSSCEES
T ss_pred CCCCCCCCCCCCcccC
Confidence 3455667777877764
No 203
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=28.37 E-value=39 Score=21.98 Aligned_cols=12 Identities=33% Similarity=0.769 Sum_probs=9.8
Q ss_pred CCccCccccccc
Q psy11251 91 GSWSCQLCLKEF 102 (190)
Q Consensus 91 ~~W~C~~C~~~~ 102 (190)
.+|.||.|....
T Consensus 59 ddW~CPvCga~K 70 (81)
T 2kn9_A 59 DDWSCPDCGAAK 70 (81)
T ss_dssp TTCCCTTTCCCG
T ss_pred CCCcCCCCCCCH
Confidence 479999998754
No 204
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.72 E-value=6.7 Score=24.10 Aligned_cols=44 Identities=20% Similarity=0.448 Sum_probs=26.2
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCcccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEFH 103 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 103 (190)
.|.+|.........+ .|.-.||..|+..-+.. ...||.|+....
T Consensus 17 ~C~IC~~~~~~~~~~---~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~~~ 60 (71)
T 2d8t_A 17 ECAICLQTCVHPVSL---PCKHVFCYLCVKGASWL----GKRCALCRQEIP 60 (71)
T ss_dssp BCSSSSSBCSSEEEE---TTTEEEEHHHHHHCTTC----SSBCSSSCCBCC
T ss_pred CCccCCcccCCCEEc---cCCCHHHHHHHHHHHHC----CCcCcCcCchhC
Confidence 455665432222222 57777898898644332 258999987653
No 205
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.29 E-value=27 Score=17.24 Aligned_cols=16 Identities=19% Similarity=0.364 Sum_probs=10.2
Q ss_pred CCCCceecCCCCCCCC
Q psy11251 12 QPEDLVSCSDCGRSGH 27 (190)
Q Consensus 12 ~~~~ll~C~~C~~~~H 27 (190)
.++....|..|++.|-
T Consensus 5 ~~~k~~~C~~C~k~f~ 20 (36)
T 2elq_A 5 SSGKPFKCSLCEYATR 20 (36)
T ss_dssp CCCCSEECSSSSCEES
T ss_pred CCCCCccCCCCCchhC
Confidence 3455667777777663
No 206
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.01 E-value=6.8 Score=24.57 Aligned_cols=48 Identities=23% Similarity=0.551 Sum_probs=26.7
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCC--CCCCCccCcccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQT--PPEGSWSCQLCLKEFH 103 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~--~p~~~W~C~~C~~~~~ 103 (190)
.|.+|...-....++ .|.-.||..|+..-+.. ...+...||.|.....
T Consensus 21 ~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecv_A 21 TCPICLELLTQPLSL---DCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQ 70 (85)
T ss_dssp CCTTTCSCCSSCBCC---SSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSC
T ss_pred CCCCCCcccCCceeC---CCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccC
Confidence 456666543222222 57777888887632211 1223568999987643
No 207
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.99 E-value=2.5 Score=25.65 Aligned_cols=18 Identities=28% Similarity=0.717 Sum_probs=11.6
Q ss_pred CceecCCCCCCCCCCCCC
Q psy11251 15 DLVSCSDCGRSGHPTCLQ 32 (190)
Q Consensus 15 ~ll~C~~C~~~~H~~Cl~ 32 (190)
..+.-..|+..||..|+.
T Consensus 33 ~~~~~~~CgH~fc~~Ci~ 50 (69)
T 2ea6_A 33 RLIVSTECGHVFCSQCLR 50 (69)
T ss_dssp CCEEECSSSCEEEHHHHH
T ss_pred CCeEeCCCCChhcHHHHH
Confidence 333445677788888874
No 208
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=26.88 E-value=32 Score=21.62 Aligned_cols=14 Identities=29% Similarity=1.120 Sum_probs=7.0
Q ss_pred CCcccCCCCCCCcCC
Q psy11251 44 YRWQCIECKCCSVCG 58 (190)
Q Consensus 44 ~~W~C~~C~~C~~C~ 58 (190)
..|+ ++|-.|..|+
T Consensus 36 ~~wH-~~CF~C~~C~ 49 (80)
T 2dj7_A 36 KQWH-VSCFKCQTCS 49 (80)
T ss_dssp EEEC-TTTCBCSSSC
T ss_pred cccc-cccCCcCcCC
Confidence 3453 4555555554
No 209
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=26.46 E-value=22 Score=26.62 Aligned_cols=8 Identities=38% Similarity=1.290 Sum_probs=7.1
Q ss_pred CcccCCCC
Q psy11251 45 RWQCIECK 52 (190)
Q Consensus 45 ~W~C~~C~ 52 (190)
.|||++|.
T Consensus 122 ~wyc~~c~ 129 (174)
T 1yfu_A 122 EWYCDACG 129 (174)
T ss_dssp EEECTTTC
T ss_pred EEEcCCCC
Confidence 69999997
No 210
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.41 E-value=33 Score=21.98 Aligned_cols=30 Identities=30% Similarity=0.600 Sum_probs=22.6
Q ss_pred CCCcCCCCCC--CCCccccCccCCcccCCCCC
Q psy11251 53 CCSVCGTSDN--DDQLLFCDDCDRGYHMYCLV 82 (190)
Q Consensus 53 ~C~~C~~~~~--~~~ll~C~~C~~~~H~~Cl~ 82 (190)
+|..|++..- ..+-+.|..|....|..|..
T Consensus 30 ~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~ 61 (83)
T 2yuu_A 30 FCSVCKDFVWGLNKQGYKCRQCNAAIHKKCID 61 (83)
T ss_dssp CCSSSCCCCCSSSCCEEEETTTCCEECTTGGG
T ss_pred ChhhcChhhccccccccccCCcCCeeChhhhh
Confidence 4677765432 23568899999999999987
No 211
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=26.08 E-value=33 Score=21.38 Aligned_cols=16 Identities=19% Similarity=0.414 Sum_probs=12.3
Q ss_pred CCCCceecCCCCCCCC
Q psy11251 12 QPEDLVSCSDCGRSGH 27 (190)
Q Consensus 12 ~~~~ll~C~~C~~~~H 27 (190)
.++....|..|++.|-
T Consensus 4 ~~~~~~~C~~C~~~f~ 19 (96)
T 2dmd_A 4 GSSGPHKCEVCGKCFS 19 (96)
T ss_dssp CCCCCCCBTTTTBCCC
T ss_pred CCCcCeECCCCCCccC
Confidence 3455678999999985
No 212
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=26.06 E-value=12 Score=21.31 Aligned_cols=30 Identities=33% Similarity=0.598 Sum_probs=21.7
Q ss_pred CCCcCCCCCC--CCCccccCccCCcccCCCCC
Q psy11251 53 CCSVCGTSDN--DDQLLFCDDCDRGYHMYCLV 82 (190)
Q Consensus 53 ~C~~C~~~~~--~~~ll~C~~C~~~~H~~Cl~ 82 (190)
+|..|++..- ..+-+.|..|....|..|..
T Consensus 13 ~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~ 44 (50)
T 1ptq_A 13 FCDHCGSLLWGLVKQGLKCEDCGMNVHHKCRE 44 (50)
T ss_dssp BCTTTCCBCCSSSSCEEEETTTCCEECHHHHT
T ss_pred CcCCCCceeeccCCccCEeCCCCCeECHHHhh
Confidence 4666665432 24668899999999999875
No 213
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=25.46 E-value=24 Score=26.50 Aligned_cols=8 Identities=50% Similarity=1.726 Sum_probs=7.0
Q ss_pred CcccCCCC
Q psy11251 45 RWQCIECK 52 (190)
Q Consensus 45 ~W~C~~C~ 52 (190)
.|||++|.
T Consensus 124 ~wyc~~c~ 131 (176)
T 1zvf_A 124 RWYCSHCR 131 (176)
T ss_dssp EEECTTTC
T ss_pred EEEcCCCC
Confidence 69999997
No 214
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=24.95 E-value=4.6 Score=24.63 Aligned_cols=20 Identities=25% Similarity=0.557 Sum_probs=14.4
Q ss_pred CCceecCCCCCCCCCCCCCC
Q psy11251 14 EDLVSCSDCGRSGHPTCLQF 33 (190)
Q Consensus 14 ~~ll~C~~C~~~~H~~Cl~~ 33 (190)
++.+.-..|+..||..|+..
T Consensus 27 ~~~~~~~~CgH~fc~~Ci~~ 46 (71)
T 3ng2_A 27 GRLIVSTECGHVFCSQCLRD 46 (71)
T ss_dssp TCCEEECTTSCEEEHHHHHH
T ss_pred cCCeEeCCCCChHhHHHHHH
Confidence 44555667888999999853
No 215
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=24.65 E-value=58 Score=21.84 Aligned_cols=42 Identities=21% Similarity=0.475 Sum_probs=24.2
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCCCCCCCCCCCCCccCccccccc
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCLVPPIQTPPEGSWSCQLCLKEF 102 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 102 (190)
.|.+|...-....++ ..|+-.|+..|+..-+. ..||.|....
T Consensus 24 ~C~IC~~~~~~pv~~--~~CgH~fC~~Ci~~~~~------~~CP~Cr~~~ 65 (117)
T 1jm7_B 24 RCSRCTNILREPVCL--GGCEHIFCSNCVSDCIG------TGCPVCYTPA 65 (117)
T ss_dssp SCSSSCSCCSSCBCC--CSSSCCBCTTTGGGGTT------TBCSSSCCBC
T ss_pred CCCCCChHhhCccEe--CCCCCHHHHHHHHHHhc------CCCcCCCCcC
Confidence 456665432222222 25677777788764332 5799998764
No 216
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=24.31 E-value=21 Score=22.59 Aligned_cols=31 Identities=29% Similarity=0.578 Sum_probs=22.8
Q ss_pred CCCcCCCCCC--CCCccccCccCCcccCCCCCC
Q psy11251 53 CCSVCGTSDN--DDQLLFCDDCDRGYHMYCLVP 83 (190)
Q Consensus 53 ~C~~C~~~~~--~~~ll~C~~C~~~~H~~Cl~p 83 (190)
+|.+|++..- ..+-+.|..|....|..|+..
T Consensus 36 ~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 68 (77)
T 2enn_A 36 FCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDK 68 (77)
T ss_dssp ECSSSCCEECCTTCCEEECSSSCCEEESGGGSS
T ss_pred CccccChhhccccccccCcCCCCCcCCHhHHhh
Confidence 5667765322 346688999999999999873
No 217
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=24.15 E-value=6.3 Score=23.71 Aligned_cols=13 Identities=23% Similarity=0.710 Sum_probs=10.9
Q ss_pred CCCCCCCCCCCCC
Q psy11251 20 SDCGRSGHPTCLQ 32 (190)
Q Consensus 20 ~~C~~~~H~~Cl~ 32 (190)
..||..||..|+.
T Consensus 24 ~~CgH~fC~~Ci~ 36 (65)
T 1g25_A 24 NVCGHTLCESCVD 36 (65)
T ss_dssp CTTCCCEEHHHHH
T ss_pred CCCCCHhHHHHHH
Confidence 4799999999984
No 218
>2e61_A Zinc finger CW-type PWWP domain protein 1; ZF-CW domain, structural genomics, NPPSFA, national project protein structural and functional analyses; NMR {Homo sapiens} PDB: 2rr4_A*
Probab=23.72 E-value=59 Score=20.34 Aligned_cols=37 Identities=32% Similarity=0.525 Sum_probs=20.9
Q ss_pred CCCCCCCCceecC--CCCCCCCCCCCCCCcccccccCCCCcccC
Q psy11251 8 EKSGQPEDLVSCS--DCGRSGHPTCLQFTNNMKVSVKQYRWQCI 49 (190)
Q Consensus 8 ~~~g~~~~ll~C~--~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~ 49 (190)
...+....-+.|+ .|.++--+ +..+....-...|+|.
T Consensus 10 ~~~~~~~~WVQCd~p~C~KWR~L-----P~~~~~~~lpd~W~C~ 48 (69)
T 2e61_A 10 SGFGQCLVWVQCSFPNCGKWRRL-----CGNIDPSVLPDNWSCD 48 (69)
T ss_dssp SSCCCCCCEEECSSTTTCCEEEC-----CSSCCTTTSCTTCCGG
T ss_pred CCCCCCCeEEEeCccccCcccCC-----ccccccccCCCcCEeC
Confidence 4445567889999 78776432 2222111224689764
No 219
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=23.53 E-value=34 Score=21.46 Aligned_cols=12 Identities=17% Similarity=0.268 Sum_probs=6.9
Q ss_pred CccccCccCCcc
Q psy11251 65 QLLFCDDCDRGY 76 (190)
Q Consensus 65 ~ll~C~~C~~~~ 76 (190)
..|.|..|..+|
T Consensus 25 ~~LiC~~cg~~Y 36 (69)
T 2pk7_A 25 TELISKGAGLAY 36 (69)
T ss_dssp SEEEETTTTEEE
T ss_pred CEEEcCCCCcEe
Confidence 345566666666
No 220
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=23.44 E-value=15 Score=23.37 Aligned_cols=10 Identities=30% Similarity=0.614 Sum_probs=5.6
Q ss_pred CCCCCCCCCC
Q psy11251 22 CGRSGHPTCL 31 (190)
Q Consensus 22 C~~~~H~~Cl 31 (190)
||..|+..|+
T Consensus 33 CGH~fC~~Cl 42 (78)
T 1e4u_A 33 CGYQICRFCW 42 (78)
T ss_dssp TSCCCCHHHH
T ss_pred CCCCcCHHHH
Confidence 5555555555
No 221
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=23.35 E-value=59 Score=21.39 Aligned_cols=12 Identities=25% Similarity=0.708 Sum_probs=9.6
Q ss_pred CCccCccccccc
Q psy11251 91 GSWSCQLCLKEF 102 (190)
Q Consensus 91 ~~W~C~~C~~~~ 102 (190)
.+|.||.|-...
T Consensus 67 ddW~CPvCga~K 78 (87)
T 1s24_A 67 DDWCCPDCGATK 78 (87)
T ss_dssp TTCCCSSSCCCG
T ss_pred CCCCCCCCCCCH
Confidence 479999998753
No 222
>2dkt_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.89.1.1 g.93.1.1 PDB: 2k2c_A
Probab=23.33 E-value=28 Score=25.17 Aligned_cols=7 Identities=29% Similarity=1.269 Sum_probs=2.9
Q ss_pred CccCccc
Q psy11251 92 SWSCQLC 98 (190)
Q Consensus 92 ~W~C~~C 98 (190)
.+.|+.|
T Consensus 98 ~yHC~~C 104 (143)
T 2dkt_A 98 QYHCESC 104 (143)
T ss_dssp EEEETTT
T ss_pred eecCCCC
Confidence 3444444
No 223
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.19 E-value=13 Score=23.52 Aligned_cols=12 Identities=33% Similarity=0.863 Sum_probs=6.6
Q ss_pred CCCCCCCCCCCC
Q psy11251 21 DCGRSGHPTCLQ 32 (190)
Q Consensus 21 ~C~~~~H~~Cl~ 32 (190)
.|+..||..|+.
T Consensus 36 ~CgH~fC~~Ci~ 47 (88)
T 2ct2_A 36 HCGHTICRQCLE 47 (88)
T ss_dssp SSSCEEEHHHHH
T ss_pred CCCChhhHHHHH
Confidence 455555555553
No 224
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=22.82 E-value=37 Score=16.76 Aligned_cols=15 Identities=33% Similarity=0.532 Sum_probs=11.0
Q ss_pred CCCceecCCCCCCCC
Q psy11251 13 PEDLVSCSDCGRSGH 27 (190)
Q Consensus 13 ~~~ll~C~~C~~~~H 27 (190)
++....|..|++.|-
T Consensus 8 ~~k~~~C~~C~k~f~ 22 (37)
T 1p7a_A 8 GIKPFQCPDCDRSFS 22 (37)
T ss_dssp CSSSBCCTTTCCCBS
T ss_pred CCCCccCCCCCcccC
Confidence 455677888888874
No 225
>4b2u_A S67; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=22.75 E-value=27 Score=18.39 Aligned_cols=12 Identities=25% Similarity=0.844 Sum_probs=8.5
Q ss_pred cCCCCcccCCCC
Q psy11251 41 VKQYRWQCIECK 52 (190)
Q Consensus 41 ~~~~~W~C~~C~ 52 (190)
..+++|-|..|.
T Consensus 14 pregdwcchkcv 25 (36)
T 4b2u_A 14 PREGDWCCHKCV 25 (36)
T ss_dssp GGGCCSSSSEEE
T ss_pred CCccCeeeeccc
Confidence 447899877763
No 226
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.74 E-value=1.3e+02 Score=18.32 Aligned_cols=39 Identities=28% Similarity=0.656 Sum_probs=22.1
Q ss_pred CCCCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCCCCCcCCC
Q psy11251 12 QPEDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECKCCSVCGT 59 (190)
Q Consensus 12 ~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~~C~~ 59 (190)
.......|..|++..... . ..+....|+ ++|-.|..|+.
T Consensus 11 ~~~~~~~C~~C~~~I~~~-------~-~~a~~~~~H-~~CF~C~~C~~ 49 (79)
T 1x62_A 11 NAQKLPMCDKCGTGIVGV-------F-VKLRDRHRH-PECYVCTDCGT 49 (79)
T ss_dssp CCCCCCCCSSSCCCCCSS-------C-EECSSCEEC-TTTTSCSSSCC
T ss_pred CCCCCCccccCCCCccCc-------E-EEECcceeC-cCcCeeCCCCC
Confidence 344566788888776532 1 122344664 56666667764
No 227
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=22.69 E-value=30 Score=15.51 Aligned_cols=10 Identities=40% Similarity=0.614 Sum_probs=6.5
Q ss_pred ecCCCCCCCC
Q psy11251 18 SCSDCGRSGH 27 (190)
Q Consensus 18 ~C~~C~~~~H 27 (190)
.|..|++.|-
T Consensus 3 ~C~~C~k~f~ 12 (27)
T 1znf_A 3 KCGLCERSFV 12 (27)
T ss_dssp BCSSSCCBCS
T ss_pred cCCCCCCcCC
Confidence 4677777763
No 228
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=22.22 E-value=50 Score=19.60 Aligned_cols=17 Identities=18% Similarity=0.475 Sum_probs=9.5
Q ss_pred CCCcccCCCCCCCcCCCC
Q psy11251 43 QYRWQCIECKCCSVCGTS 60 (190)
Q Consensus 43 ~~~W~C~~C~~C~~C~~~ 60 (190)
...|+ ++|-.|..|++.
T Consensus 32 ~~~~H-~~CF~C~~C~~~ 48 (72)
T 3f6q_B 32 GELYH-EQCFVCAQCFQQ 48 (72)
T ss_dssp TEEEE-TTTSSCTTTCCC
T ss_pred cCeeC-cCCCcccCCCCC
Confidence 34554 556666666643
No 229
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.08 E-value=72 Score=20.44 Aligned_cols=11 Identities=36% Similarity=1.352 Sum_probs=8.2
Q ss_pred CCccCcccccc
Q psy11251 91 GSWSCQLCLKE 101 (190)
Q Consensus 91 ~~W~C~~C~~~ 101 (190)
+.|.|.-|...
T Consensus 63 ~~W~C~VC~k~ 73 (76)
T 2csz_A 63 GTWRCKVCSGP 73 (76)
T ss_dssp TCEEEHHHHSS
T ss_pred CCEEEeeCchh
Confidence 57888888754
No 230
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=22.00 E-value=30 Score=21.55 Aligned_cols=27 Identities=22% Similarity=0.583 Sum_probs=15.4
Q ss_pred CCCcCCCCCCCCCccccCccCCcccCCCC
Q psy11251 53 CCSVCGTSDNDDQLLFCDDCDRGYHMYCL 81 (190)
Q Consensus 53 ~C~~C~~~~~~~~ll~C~~C~~~~H~~Cl 81 (190)
.|..|++....+..+ ..-++.||..|.
T Consensus 9 ~C~~C~~~I~~~~~~--~a~~~~~H~~CF 35 (81)
T 1a7i_A 9 KCGACGRTVYHAEEV--QCDGRSFHRCCF 35 (81)
T ss_dssp BCSSSCCBCSSTTEE--EETTEEEESSSE
T ss_pred cCcCcCccccCceeE--EeCCcccccccC
Confidence 466667665434433 234667887764
No 231
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=21.90 E-value=30 Score=15.72 Aligned_cols=11 Identities=27% Similarity=0.549 Sum_probs=7.5
Q ss_pred eecCCCCCCCC
Q psy11251 17 VSCSDCGRSGH 27 (190)
Q Consensus 17 l~C~~C~~~~H 27 (190)
..|+.|+++|-
T Consensus 3 ~~C~~C~~~f~ 13 (29)
T 1ard_A 3 FVCEVCTRAFA 13 (29)
T ss_dssp CBCTTTCCBCS
T ss_pred eECCCCCcccC
Confidence 35777887774
No 232
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=21.87 E-value=14 Score=22.61 Aligned_cols=12 Identities=42% Similarity=1.113 Sum_probs=9.0
Q ss_pred CCCccCcccccc
Q psy11251 90 EGSWSCQLCLKE 101 (190)
Q Consensus 90 ~~~W~C~~C~~~ 101 (190)
.-.|.|..|...
T Consensus 49 k~~WvC~lC~k~ 60 (62)
T 2a20_A 49 KVMWVCNLCRKQ 60 (62)
T ss_dssp CEEEEEHHHHHH
T ss_pred eEEEEehhhhhc
Confidence 348999998754
No 233
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.84 E-value=41 Score=16.61 Aligned_cols=15 Identities=13% Similarity=0.199 Sum_probs=9.6
Q ss_pred CCCceecCCCCCCCC
Q psy11251 13 PEDLVSCSDCGRSGH 27 (190)
Q Consensus 13 ~~~ll~C~~C~~~~H 27 (190)
++....|+.|++.|-
T Consensus 6 ~~k~~~C~~C~k~f~ 20 (37)
T 2elp_A 6 SGRAMKCPYCDFYFM 20 (37)
T ss_dssp CCCCEECSSSSCEEC
T ss_pred CCCCeECCCCChhhc
Confidence 345566777777764
No 234
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.84 E-value=3.9 Score=24.49 Aligned_cols=12 Identities=25% Similarity=1.002 Sum_probs=7.2
Q ss_pred ccCCcccCCCCC
Q psy11251 71 DCDRGYHMYCLV 82 (190)
Q Consensus 71 ~C~~~~H~~Cl~ 82 (190)
.|+-.||..|+.
T Consensus 37 ~CgH~fC~~Ci~ 48 (63)
T 2ysj_A 37 DCGHNFCLKCIT 48 (63)
T ss_dssp TTSSEECHHHHH
T ss_pred CCCCcchHHHHH
Confidence 566566666654
No 235
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=21.73 E-value=5.4 Score=24.15 Aligned_cols=15 Identities=13% Similarity=0.180 Sum_probs=11.2
Q ss_pred cCCCCCCCCCCCCCC
Q psy11251 19 CSDCGRSGHPTCLQF 33 (190)
Q Consensus 19 C~~C~~~~H~~Cl~~ 33 (190)
-..|+..||..|+..
T Consensus 21 ~~~C~H~fc~~Ci~~ 35 (68)
T 1chc_A 21 ALPCLHAFCYVCITR 35 (68)
T ss_dssp ETTTTEEESTTHHHH
T ss_pred ecCCCCeeHHHHHHH
Confidence 346888899999853
No 236
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=21.65 E-value=1.3e+02 Score=18.82 Aligned_cols=15 Identities=27% Similarity=0.479 Sum_probs=10.1
Q ss_pred CCCceecCCCCCCCC
Q psy11251 13 PEDLVSCSDCGRSGH 27 (190)
Q Consensus 13 ~~~ll~C~~C~~~~H 27 (190)
.+....|..|++.|-
T Consensus 14 ~~~~~~C~~C~~~f~ 28 (106)
T 2ee8_A 14 TKKEFICKFCGRHFT 28 (106)
T ss_dssp CCCCCBCSSSCCBCS
T ss_pred CCcCeECCCCCCccC
Confidence 344567888887774
No 237
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=21.59 E-value=36 Score=20.74 Aligned_cols=30 Identities=23% Similarity=0.396 Sum_probs=21.7
Q ss_pred CCCcCCCCCC--CCCccccCccCCcccCCCCC
Q psy11251 53 CCSVCGTSDN--DDQLLFCDDCDRGYHMYCLV 82 (190)
Q Consensus 53 ~C~~C~~~~~--~~~ll~C~~C~~~~H~~Cl~ 82 (190)
+|..|++..- ..+-+.|..|....|..|..
T Consensus 26 ~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~ 57 (66)
T 1y8f_A 26 YCYECEGLLWGIARQGMRCTECGVKCHEKCQD 57 (66)
T ss_dssp CCTTTCCCCCSSCCEEEEETTTCCEECTTHHH
T ss_pred ChhhcChhhcccCcceeEcCCCCCeeCHHHHh
Confidence 4667765432 23558899999999999975
No 238
>3he4_A Synzip6; heterodimeric coiled-coil, de novo protein; 2.46A {Artificial gene}
Probab=21.57 E-value=44 Score=19.25 Aligned_cols=16 Identities=44% Similarity=0.511 Sum_probs=12.2
Q ss_pred hhhhhhhHHHHHHHhh
Q psy11251 166 CLADYENANRNLERAR 181 (190)
Q Consensus 166 ~l~~~~~~~~~l~~~~ 181 (190)
-++++||.|.+|++-.
T Consensus 25 ivarlendnanlekdi 40 (56)
T 3he4_A 25 IVARLENDNANLEKDI 40 (56)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHhcccchHHHHH
Confidence 4677889998888753
No 239
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=21.54 E-value=37 Score=15.25 Aligned_cols=10 Identities=20% Similarity=0.760 Sum_probs=7.3
Q ss_pred ecCCCCCCCC
Q psy11251 18 SCSDCGRSGH 27 (190)
Q Consensus 18 ~C~~C~~~~H 27 (190)
.|..|+++|-
T Consensus 4 ~C~~C~~~f~ 13 (29)
T 2m0e_A 4 KCPHCDKKFN 13 (29)
T ss_dssp CCSSCCCCCC
T ss_pred cCCCCCcccC
Confidence 5778888774
No 240
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.41 E-value=91 Score=18.82 Aligned_cols=40 Identities=18% Similarity=0.373 Sum_probs=19.2
Q ss_pred CCceecCCCCCCCCCCCCCCCcccccccCCCCcccCCCCCCCcCCCC
Q psy11251 14 EDLVSCSDCGRSGHPTCLQFTNNMKVSVKQYRWQCIECKCCSVCGTS 60 (190)
Q Consensus 14 ~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~~C~~~ 60 (190)
.....|..|++.... .+....+....|+ ++|-.|..|++.
T Consensus 9 ~~~~~C~~C~~~I~~------~~~~~~a~~~~~H-~~CF~C~~C~~~ 48 (77)
T 1g47_A 9 LASATCERCKGGFAP------AEKIVNSNGELYH-EQCFVCAQCFQQ 48 (77)
T ss_dssp CCCCBCSSSCCBCCS------TTTCEEETTEEEC-TTTCCCTTTCCC
T ss_pred CCCCCchhcCCccCC------CceEEEeCccEec-cccCeECCCCCC
Confidence 334567777766531 1111122233453 566666666643
No 241
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.36 E-value=60 Score=19.50 Aligned_cols=16 Identities=25% Similarity=0.908 Sum_probs=9.4
Q ss_pred CCCcccCCCCCCCcCCC
Q psy11251 43 QYRWQCIECKCCSVCGT 59 (190)
Q Consensus 43 ~~~W~C~~C~~C~~C~~ 59 (190)
...|+ ++|-.|..|++
T Consensus 28 ~~~wH-~~CF~C~~C~~ 43 (72)
T 1x4l_A 28 ERQWH-NDCFNCKKCSL 43 (72)
T ss_dssp SCEEC-TTTCBCSSSCC
T ss_pred CcccC-cccCEeccCCC
Confidence 44565 66666666654
No 242
>3gj7_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.93A {Rattus norvegicus} PDB: 2k0c_A 3ch5_B* 3gj6_B*
Probab=21.34 E-value=43 Score=22.46 Aligned_cols=11 Identities=27% Similarity=0.776 Sum_probs=7.1
Q ss_pred CCCCcccCCCC
Q psy11251 42 KQYRWQCIECK 52 (190)
Q Consensus 42 ~~~~W~C~~C~ 52 (190)
+.+.|.|..|.
T Consensus 69 ~~g~W~C~~C~ 79 (98)
T 3gj7_B 69 AIGTWDCDTCL 79 (98)
T ss_dssp --CCEECTTTC
T ss_pred CCCcccCCcCc
Confidence 46899877774
No 243
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=21.31 E-value=4.6 Score=23.96 Aligned_cols=20 Identities=25% Similarity=0.557 Sum_probs=14.5
Q ss_pred CCceecCCCCCCCCCCCCCC
Q psy11251 14 EDLVSCSDCGRSGHPTCLQF 33 (190)
Q Consensus 14 ~~ll~C~~C~~~~H~~Cl~~ 33 (190)
++.+.-..|+..||..|+..
T Consensus 20 ~~~~~~~~CgH~fc~~Ci~~ 39 (64)
T 2xeu_A 20 GRLIVSTECGHVFCSQCLRD 39 (64)
T ss_dssp TCCEEEETTSCEEEHHHHHH
T ss_pred CCCEEeCCCCCchhHHHHHH
Confidence 34445568999999999853
No 244
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=21.27 E-value=29 Score=15.72 Aligned_cols=11 Identities=36% Similarity=0.733 Sum_probs=6.4
Q ss_pred eecCCCCCCCC
Q psy11251 17 VSCSDCGRSGH 27 (190)
Q Consensus 17 l~C~~C~~~~H 27 (190)
..|+.|++.|-
T Consensus 4 ~~C~~C~k~f~ 14 (27)
T 2kvh_A 4 FSCSLCPQRSR 14 (27)
T ss_dssp EECSSSSCEES
T ss_pred ccCCCcChhhC
Confidence 45666666653
No 245
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=21.07 E-value=11 Score=23.57 Aligned_cols=11 Identities=27% Similarity=0.673 Sum_probs=6.2
Q ss_pred CCCCCCCCCCC
Q psy11251 22 CGRSGHPTCLQ 32 (190)
Q Consensus 22 C~~~~H~~Cl~ 32 (190)
|+..||..|+.
T Consensus 37 CgH~fC~~Ci~ 47 (85)
T 2ecw_A 37 CNHSFCRACIT 47 (85)
T ss_dssp TSCCBCHHHHH
T ss_pred CCCHHHHHHHH
Confidence 55556655653
No 246
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=20.88 E-value=40 Score=19.71 Aligned_cols=18 Identities=33% Similarity=0.582 Sum_probs=11.4
Q ss_pred CCCCCCceecCCCCCCCC
Q psy11251 10 SGQPEDLVSCSDCGRSGH 27 (190)
Q Consensus 10 ~g~~~~ll~C~~C~~~~H 27 (190)
+..++....|..|++.|-
T Consensus 3 s~~~~~~~~C~~C~k~f~ 20 (70)
T 1x5w_A 3 SGSSGHPEKCSECSYSCS 20 (70)
T ss_dssp SCCCCCSEECSSSSCEES
T ss_pred CCCCCCCeECCCCCcccC
Confidence 445566667777777663
No 247
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=20.65 E-value=33 Score=16.58 Aligned_cols=14 Identities=14% Similarity=0.133 Sum_probs=9.6
Q ss_pred CCceecCCCCCCCC
Q psy11251 14 EDLVSCSDCGRSGH 27 (190)
Q Consensus 14 ~~ll~C~~C~~~~H 27 (190)
+....|+.|++.|-
T Consensus 5 ~k~~~C~~C~k~f~ 18 (35)
T 2elx_A 5 SSGYVCALCLKKFV 18 (35)
T ss_dssp CCSEECSSSCCEES
T ss_pred CCCeECCCCcchhC
Confidence 44567888887764
No 248
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.53 E-value=76 Score=18.97 Aligned_cols=10 Identities=40% Similarity=1.155 Sum_probs=4.9
Q ss_pred CCCCCCCcCC
Q psy11251 49 IECKCCSVCG 58 (190)
Q Consensus 49 ~~C~~C~~C~ 58 (190)
++|-.|..|+
T Consensus 31 ~~CF~C~~C~ 40 (72)
T 1x61_A 31 VGCFVCSTCR 40 (72)
T ss_dssp TTTCBCSSSC
T ss_pred ccCCcccccC
Confidence 4454554444
No 249
>2dlo_A Thyroid receptor-interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.53 E-value=1.1e+02 Score=18.78 Aligned_cols=16 Identities=25% Similarity=0.619 Sum_probs=8.2
Q ss_pred CCCcccCCCCCCCcCCC
Q psy11251 43 QYRWQCIECKCCSVCGT 59 (190)
Q Consensus 43 ~~~W~C~~C~~C~~C~~ 59 (190)
...|+ ++|-.|..|++
T Consensus 34 ~~~~H-~~CF~C~~C~~ 49 (81)
T 2dlo_A 34 GKAYH-PGCFTCVVCHR 49 (81)
T ss_dssp TEEEC-TTTCBCSSSCC
T ss_pred Ccccc-HHhcCcccCCC
Confidence 33454 55555555554
No 250
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=20.30 E-value=34 Score=15.73 Aligned_cols=11 Identities=27% Similarity=0.609 Sum_probs=7.5
Q ss_pred eecCCCCCCCC
Q psy11251 17 VSCSDCGRSGH 27 (190)
Q Consensus 17 l~C~~C~~~~H 27 (190)
..|+.|++.|-
T Consensus 3 ~~C~~C~k~f~ 13 (30)
T 1paa_A 3 YACGLCNRAFT 13 (30)
T ss_dssp SBCTTTCCBCS
T ss_pred cCCcccCcccC
Confidence 35777887774
No 251
>2l9z_A PR domain zinc finger protein 4; zinc-binding domain, transcription; NMR {Homo sapiens}
Probab=20.04 E-value=33 Score=19.10 Aligned_cols=23 Identities=17% Similarity=0.307 Sum_probs=17.5
Q ss_pred CCCCCCceecCCCCCCCCCCCCC
Q psy11251 10 SGQPEDLVSCSDCGRSGHPTCLQ 32 (190)
Q Consensus 10 ~g~~~~ll~C~~C~~~~H~~Cl~ 32 (190)
..+.-..|+|..|.+.|=..|-.
T Consensus 5 ~~~~~~yl~CE~C~~~~~~~Cp~ 27 (39)
T 2l9z_A 5 NMATLFTIWCTLCDRAYPSDCPE 27 (39)
T ss_dssp CSCCSCSEEEGGGTEEESSSBTT
T ss_pred cchhhhhhHHHHHhhhchhhchh
Confidence 33445788999999998888865
Done!