Your job contains 1 sequence.
>psy11253
MTTPVVDEVRHKTLQDYRKKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVA
LDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELF
QRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAIVLIFAVIFLHMPNL
CDSHGHSHHSHEHSHDHGKLPSFKYSKQANEPYHQDVKHPITLQVWGEALLSTILISLAP
FLILFVVPLDTATGNENFLKVLLSFGSGGLLGDAFLHLIPHAIGASKEHSHSHSHGGSHE
HSHSIADLSVGLWVLFGILAFLCVEKFVRYVKGGHGHSHGKPIEKKKHTSSGEDSDLSDD
EDDSDDVDYKKTKRVKAKTSSQSNDDIAVAGYLNLAADFTHNFTDGLAIGASYLAGKHVG
IVTTITILFHEIPHEIGDFAILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA
IGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQ
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11253
(515 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1NCS8 - symbol:PSMC6 "Uncharacterized protein"... 628 9.1e-105 3
UNIPROTKB|Q5ZKX2 - symbol:PSMC6 "Uncharacterized protein"... 628 1.5e-104 3
UNIPROTKB|J9P1N0 - symbol:PSMC6 "Uncharacterized protein"... 623 3.1e-104 3
UNIPROTKB|F1SFE6 - symbol:PSMC6 "Uncharacterized protein"... 623 3.1e-104 3
RGD|2318218 - symbol:LOC100365869 "proteasome (prosome, m... 623 3.1e-104 3
UNIPROTKB|F1MLV1 - symbol:PSMC6 "26S protease regulatory ... 623 5.0e-104 3
UNIPROTKB|Q2KIW6 - symbol:PSMC6 "26S protease regulatory ... 623 5.0e-104 3
UNIPROTKB|P62333 - symbol:PSMC6 "26S protease regulatory ... 623 5.0e-104 3
UNIPROTKB|P62335 - symbol:PSMC6 "26S protease regulatory ... 623 5.0e-104 3
MGI|MGI:1914339 - symbol:Psmc6 "proteasome (prosome, macr... 623 5.0e-104 3
ZFIN|ZDB-GENE-030131-304 - symbol:psmc6 "proteasome (pros... 622 5.0e-104 3
RGD|1308825 - symbol:Psmc6 "proteasome (prosome, macropai... 623 4.4e-103 3
WB|WBGene00004504 - symbol:rpt-4 species:6239 "Caenorhabd... 580 3.4e-97 3
UNIPROTKB|O17071 - symbol:rpt-4 "Probable 26S protease re... 580 3.4e-97 3
UNIPROTKB|H0YJC0 - symbol:PSMC6 "26S protease regulatory ... 623 2.0e-87 3
ASPGD|ASPL0000032311 - symbol:AN5747 species:162425 "Emer... 542 7.2e-86 2
UNIPROTKB|H0YJS8 - symbol:PSMC6 "26S protease regulatory ... 696 8.2e-85 2
CGD|CAL0005827 - symbol:RPT4 species:5476 "Candida albica... 485 1.1e-84 3
DICTYBASE|DDB_G0284517 - symbol:psmC6 "26S protease regul... 461 4.5e-82 3
GENEDB_PFALCIPARUM|PF13_0033 - symbol:PF13_0033 "26S prot... 435 2.7e-78 3
UNIPROTKB|Q8IEQ1 - symbol:PF13_0033 "26S proteasome regul... 435 2.7e-78 3
SGD|S000005785 - symbol:RPT4 "ATPase of the 19S regulator... 471 5.9e-78 2
FB|FBgn0028685 - symbol:Rpt4 "Regulatory particle triple-... 643 6.0e-72 2
FB|FBgn0036224 - symbol:Rpt4R "Regulatory particle triple... 583 1.2e-56 1
UNIPROTKB|Q9FXT8 - symbol:OsRPT4 "Os02g0199900 protein" s... 547 9.9e-56 2
TAIR|locus:2159996 - symbol:RPT4A "regulatory particle tr... 545 1.3e-52 1
TAIR|locus:2028200 - symbol:AT1G45000 species:3702 "Arabi... 545 1.3e-52 1
CGD|CAL0005689 - symbol:RPT1 species:5476 "Candida albica... 328 4.8e-52 2
TAIR|locus:2024822 - symbol:RPT1A "regulatory particle tr... 315 3.3e-51 2
TAIR|locus:2147685 - symbol:AT5G20000 species:3702 "Arabi... 320 6.0e-50 2
DICTYBASE|DDB_G0292382 - symbol:psmC5 "HIV TAT binding-pr... 320 7.7e-50 2
TAIR|locus:2147670 - symbol:RPT6A "regulatory particle tr... 318 9.8e-50 2
POMBASE|SPCC1682.16 - symbol:rpt4 "19S proteasome regulat... 516 1.5e-49 1
SGD|S000001628 - symbol:RPT1 "ATPase of the 19S regulator... 322 2.3e-49 2
GENEDB_PFALCIPARUM|PF13_0063 - symbol:PF13_0063 "26S prot... 313 2.6e-49 2
UNIPROTKB|Q8IEK3 - symbol:PF13_0063 "26S proteasome regul... 313 2.6e-49 2
POMBASE|SPBC23G7.12c - symbol:rpt6 "19S proteasome regula... 311 4.2e-49 2
UNIPROTKB|F1NU79 - symbol:PSMC5 "Uncharacterized protein"... 306 5.6e-49 2
UNIPROTKB|P62194 - symbol:PSMC5 "26S protease regulatory ... 306 5.6e-49 2
UNIPROTKB|E2RM61 - symbol:PSMC5 "Uncharacterized protein"... 306 5.6e-49 2
UNIPROTKB|P62195 - symbol:PSMC5 "26S protease regulatory ... 306 5.6e-49 2
UNIPROTKB|P62197 - symbol:PSMC5 "26S protease regulatory ... 306 5.6e-49 2
UNIPROTKB|Q4RG45 - symbol:GSTENG00035021001 "Chromosome 2... 306 5.6e-49 2
UNIPROTKB|Q6AZU7 - symbol:Q6AZU7 "Putative uncharacterize... 306 5.6e-49 2
UNIPROTKB|Q6P380 - symbol:psmc5 "Putative uncharacterized... 306 5.6e-49 2
MGI|MGI:105047 - symbol:Psmc5 "protease (prosome, macropa... 306 5.6e-49 2
RGD|708376 - symbol:Psmc5 "proteasome (prosome, macropain... 306 5.6e-49 2
ZFIN|ZDB-GENE-030131-6547 - symbol:psmc5 "proteasome (pro... 306 5.6e-49 2
POMBASE|SPBC16C6.07c - symbol:rpt1 "19S proteasome regula... 313 1.2e-48 2
ASPGD|ASPL0000064945 - symbol:AN6988 species:162425 "Emer... 306 1.5e-48 2
GENEDB_PFALCIPARUM|PFL2345c - symbol:PFL2345c "tat-bindin... 306 1.5e-48 3
UNIPROTKB|Q8I4U5 - symbol:PFL2345c "Tat-binding protein h... 306 1.5e-48 3
FB|FBgn0002022 - symbol:Catsup "Catecholamines up" specie... 468 1.8e-48 2
WB|WBGene00004506 - symbol:rpt-6 species:6239 "Caenorhabd... 309 1.8e-48 2
UNIPROTKB|E1C4V5 - symbol:PSMC2 "Uncharacterized protein"... 305 4.0e-48 2
FB|FBgn0020369 - symbol:Rpt6 "Regulatory particle triple-... 299 7.8e-48 2
UNIPROTKB|B7Z5E2 - symbol:PSMC2 "cDNA FLJ52353, highly si... 287 9.0e-48 2
FB|FBgn0039788 - symbol:Rpt6R "Regulatory particle triple... 303 9.9e-48 2
CGD|CAL0006022 - symbol:RPT6 species:5476 "Candida albica... 300 1.2e-47 2
UNIPROTKB|F1NFL8 - symbol:PSMC2 "Uncharacterized protein"... 305 1.3e-47 2
UNIPROTKB|Q5E9F9 - symbol:PSMC2 "26S protease regulatory ... 305 1.4e-47 2
UNIPROTKB|F1PPH7 - symbol:PSMC2 "Uncharacterized protein"... 305 1.4e-47 2
UNIPROTKB|P35998 - symbol:PSMC2 "26S protease regulatory ... 305 1.4e-47 2
UNIPROTKB|P46472 - symbol:psmc2 "26S protease regulatory ... 305 1.4e-47 2
UNIPROTKB|Q4R4R0 - symbol:PSMC2 "26S protease regulatory ... 305 1.4e-47 2
UNIPROTKB|Q5R8D7 - symbol:PSMC2 "26S protease regulatory ... 305 1.4e-47 2
MGI|MGI:109555 - symbol:Psmc2 "proteasome (prosome, macro... 305 1.4e-47 2
ZFIN|ZDB-GENE-040426-1327 - symbol:psmc2 "proteasome (pro... 305 1.4e-47 2
UNIPROTKB|I3LJ30 - symbol:I3LJ30 "Uncharacterized protein... 305 1.6e-47 2
FB|FBgn0028687 - symbol:Rpt1 "Regulatory particle triple-... 304 1.7e-47 2
UNIPROTKB|J3QQM1 - symbol:PSMC5 "26S protease regulatory ... 302 1.7e-47 2
RGD|3428 - symbol:Psmc2 "proteasome (prosome, macropain) ... 302 5.3e-47 2
UNIPROTKB|Q63347 - symbol:Psmc2 "26S protease regulatory ... 302 5.3e-47 2
ASPGD|ASPL0000034636 - symbol:AN2917 species:162425 "Emer... 304 9.8e-47 2
DICTYBASE|DDB_G0276917 - symbol:psmC2 "26S proteasome ATP... 300 1.1e-46 2
WB|WBGene00018991 - symbol:F56F11.4 species:6239 "Caenorh... 311 1.1e-46 2
UNIPROTKB|F1SB53 - symbol:PSMC2 "Uncharacterized protein"... 305 1.4e-46 2
WB|WBGene00004501 - symbol:rpt-1 species:6239 "Caenorhabd... 300 2.4e-46 2
UNIPROTKB|Q18787 - symbol:rpt-1 "26S protease regulatory ... 300 2.4e-46 2
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 314 3.1e-46 2
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 284 4.0e-46 2
GENEDB_PFALCIPARUM|PF10_0081 - symbol:PF10_0081 "26S prot... 305 1.0e-45 2
UNIPROTKB|Q8IJW0 - symbol:PF10_0081 "26S proteasome regul... 305 1.0e-45 2
DICTYBASE|DDB_G0270784 - symbol:psmC1 "TAT binding protei... 314 1.6e-45 2
SGD|S000003016 - symbol:RPT6 "ATPase of the 19S regulator... 295 4.5e-45 2
ASPGD|ASPL0000049719 - symbol:AN2213 species:162425 "Emer... 304 1.5e-44 2
ZFIN|ZDB-GENE-991110-20 - symbol:slc39a7 "solute carrier ... 464 5.0e-44 1
UNIPROTKB|P46470 - symbol:psmc5 "26S protease regulatory ... 299 9.5e-44 2
POMBASE|SPBC4.07c - symbol:rpt2 "19S proteasome regulator... 292 1.0e-43 2
TAIR|locus:2061639 - symbol:RPT2b "regulatory particle AA... 297 1.5e-43 2
TAIR|locus:2119926 - symbol:RPT2a "regulatory particle AA... 297 2.5e-43 2
FB|FBgn0015282 - symbol:Rpt2 "Regulatory particle triple-... 285 9.5e-43 2
POMBASE|SPCC576.10c - symbol:rpt3 "19S proteasome regulat... 281 1.1e-42 2
UNIPROTKB|F1NTZ4 - symbol:PSMC1 "26S protease regulatory ... 284 1.1e-42 2
UNIPROTKB|F1NSP7 - symbol:PSMC1 "26S protease regulatory ... 284 1.1e-42 2
UNIPROTKB|A4FUZ3 - symbol:PSMC1 "Proteasome (Prosome, mac... 284 1.1e-42 2
UNIPROTKB|F1PQ40 - symbol:PSMC1 "Uncharacterized protein"... 284 1.1e-42 2
UNIPROTKB|P62191 - symbol:PSMC1 "26S protease regulatory ... 284 1.1e-42 2
UNIPROTKB|F2Z5J1 - symbol:PSMC1 "Uncharacterized protein"... 284 1.1e-42 2
MGI|MGI:106054 - symbol:Psmc1 "protease (prosome, macropa... 284 1.1e-42 2
WARNING: Descriptions of 636 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 628 (226.1 bits), Expect = 9.1e-105, Sum P(3) = 9.1e-105
Identities = 125/146 (85%), Positives = 132/146 (90%)
Query: 19 KKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDP 78
K+LTE E + + TNGPRYVVGCRRQLDK+KLK GTRVALDMTTLTIMRYLPREVDP
Sbjct: 76 KQLTE----EKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDP 131
Query: 79 LVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPG 138
LVYNMSHEDPGD++YS IGGLSEQIRELREVIELPL NPELFQRVGI PPKGCLLYGPPG
Sbjct: 132 LVYNMSHEDPGDVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPG 191
Query: 139 TGKTLLARAVASQLDANFLKVVSRTI 164
TGKTLLARAVASQLD NFLKVVS +I
Sbjct: 192 TGKTLLARAVASQLDCNFLKVVSSSI 217
Score = 348 (127.6 bits), Expect = 9.1e-105, Sum P(3) = 9.1e-105
Identities = 67/73 (91%), Positives = 71/73 (97%)
Query: 441 ILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 500
++ +IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL
Sbjct: 212 VVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 271
Query: 501 MELLNQMDGFDSL 513
MELLNQMDGFD+L
Sbjct: 272 MELLNQMDGFDTL 284
Score = 95 (38.5 bits), Expect = 9.1e-105, Sum P(3) = 9.1e-105
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 5 VVDEVRHKTLQDYRKKLTEHAEVEGRLRE 33
++ + R K LQDYRKKL EH E++GRL+E
Sbjct: 14 IMADPRDKALQDYRKKLLEHKEIDGRLKE 42
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 628 (226.1 bits), Expect = 1.5e-104, Sum P(3) = 1.5e-104
Identities = 125/146 (85%), Positives = 132/146 (90%)
Query: 19 KKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDP 78
K+LTE E + + TNGPRYVVGCRRQLDK+KLK GTRVALDMTTLTIMRYLPREVDP
Sbjct: 62 KQLTE----EKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDP 117
Query: 79 LVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPG 138
LVYNMSHEDPGD++YS IGGLSEQIRELREVIELPL NPELFQRVGI PPKGCLLYGPPG
Sbjct: 118 LVYNMSHEDPGDVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPG 177
Query: 139 TGKTLLARAVASQLDANFLKVVSRTI 164
TGKTLLARAVASQLD NFLKVVS +I
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSI 203
Score = 348 (127.6 bits), Expect = 1.5e-104, Sum P(3) = 1.5e-104
Identities = 67/73 (91%), Positives = 71/73 (97%)
Query: 441 ILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 500
++ +IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL
Sbjct: 198 VVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 257
Query: 501 MELLNQMDGFDSL 513
MELLNQMDGFD+L
Sbjct: 258 MELLNQMDGFDTL 270
Score = 93 (37.8 bits), Expect = 1.5e-104, Sum P(3) = 1.5e-104
Identities = 17/24 (70%), Positives = 20/24 (83%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLRE 33
R K LQDYRKKL EH E++GRL+E
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKE 28
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 623 (224.4 bits), Expect = 3.1e-104, Sum P(3) = 3.1e-104
Identities = 124/146 (84%), Positives = 132/146 (90%)
Query: 19 KKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDP 78
K+LTE E + + TNGPRYVVGCRRQLDK+KLK GTRVALDMTTLTIMRYLPREVDP
Sbjct: 68 KQLTE----EKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDP 123
Query: 79 LVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPG 138
LVYNMSHEDPG+++YS IGGLSEQIRELREVIELPL NPELFQRVGI PPKGCLLYGPPG
Sbjct: 124 LVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPG 183
Query: 139 TGKTLLARAVASQLDANFLKVVSRTI 164
TGKTLLARAVASQLD NFLKVVS +I
Sbjct: 184 TGKTLLARAVASQLDCNFLKVVSSSI 209
Score = 348 (127.6 bits), Expect = 3.1e-104, Sum P(3) = 3.1e-104
Identities = 67/73 (91%), Positives = 71/73 (97%)
Query: 441 ILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 500
++ +IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL
Sbjct: 204 VVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 263
Query: 501 MELLNQMDGFDSL 513
MELLNQMDGFD+L
Sbjct: 264 MELLNQMDGFDTL 276
Score = 95 (38.5 bits), Expect = 3.1e-104, Sum P(3) = 3.1e-104
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 5 VVDEVRHKTLQDYRKKLTEHAEVEGRLRE 33
++ + R K LQDYRKKL EH E++GRL+E
Sbjct: 6 IMADPRDKALQDYRKKLLEHKEIDGRLKE 34
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 623 (224.4 bits), Expect = 3.1e-104, Sum P(3) = 3.1e-104
Identities = 124/146 (84%), Positives = 132/146 (90%)
Query: 19 KKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDP 78
K+LTE E + + TNGPRYVVGCRRQLDK+KLK GTRVALDMTTLTIMRYLPREVDP
Sbjct: 76 KQLTE----EKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDP 131
Query: 79 LVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPG 138
LVYNMSHEDPG+++YS IGGLSEQIRELREVIELPL NPELFQRVGI PPKGCLLYGPPG
Sbjct: 132 LVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPG 191
Query: 139 TGKTLLARAVASQLDANFLKVVSRTI 164
TGKTLLARAVASQLD NFLKVVS +I
Sbjct: 192 TGKTLLARAVASQLDCNFLKVVSSSI 217
Score = 348 (127.6 bits), Expect = 3.1e-104, Sum P(3) = 3.1e-104
Identities = 67/73 (91%), Positives = 71/73 (97%)
Query: 441 ILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 500
++ +IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL
Sbjct: 212 VVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 271
Query: 501 MELLNQMDGFDSL 513
MELLNQMDGFD+L
Sbjct: 272 MELLNQMDGFDTL 284
Score = 95 (38.5 bits), Expect = 3.1e-104, Sum P(3) = 3.1e-104
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 5 VVDEVRHKTLQDYRKKLTEHAEVEGRLRE 33
++ + R K LQDYRKKL EH E++GRL+E
Sbjct: 14 IMADPRDKALQDYRKKLLEHKEIDGRLKE 42
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 623 (224.4 bits), Expect = 3.1e-104, Sum P(3) = 3.1e-104
Identities = 124/146 (84%), Positives = 132/146 (90%)
Query: 19 KKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDP 78
K+LTE E + + TNGPRYVVGCRRQLDK+KLK GTRVALDMTTLTIMRYLPREVDP
Sbjct: 76 KQLTE----EKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDP 131
Query: 79 LVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPG 138
LVYNMSHEDPG+++YS IGGLSEQIRELREVIELPL NPELFQRVGI PPKGCLLYGPPG
Sbjct: 132 LVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPG 191
Query: 139 TGKTLLARAVASQLDANFLKVVSRTI 164
TGKTLLARAVASQLD NFLKVVS +I
Sbjct: 192 TGKTLLARAVASQLDCNFLKVVSSSI 217
Score = 348 (127.6 bits), Expect = 3.1e-104, Sum P(3) = 3.1e-104
Identities = 67/73 (91%), Positives = 71/73 (97%)
Query: 441 ILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 500
++ +IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL
Sbjct: 212 VVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 271
Query: 501 MELLNQMDGFDSL 513
MELLNQMDGFD+L
Sbjct: 272 MELLNQMDGFDTL 284
Score = 95 (38.5 bits), Expect = 3.1e-104, Sum P(3) = 3.1e-104
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 5 VVDEVRHKTLQDYRKKLTEHAEVEGRLRE 33
++ + R K LQDYRKKL EH E++GRL+E
Sbjct: 14 IMADPRDKALQDYRKKLLEHKEIDGRLKE 42
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 623 (224.4 bits), Expect = 5.0e-104, Sum P(3) = 5.0e-104
Identities = 124/146 (84%), Positives = 132/146 (90%)
Query: 19 KKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDP 78
K+LTE E + + TNGPRYVVGCRRQLDK+KLK GTRVALDMTTLTIMRYLPREVDP
Sbjct: 62 KQLTE----EKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDP 117
Query: 79 LVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPG 138
LVYNMSHEDPG+++YS IGGLSEQIRELREVIELPL NPELFQRVGI PPKGCLLYGPPG
Sbjct: 118 LVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPG 177
Query: 139 TGKTLLARAVASQLDANFLKVVSRTI 164
TGKTLLARAVASQLD NFLKVVS +I
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSI 203
Score = 348 (127.6 bits), Expect = 5.0e-104, Sum P(3) = 5.0e-104
Identities = 67/73 (91%), Positives = 71/73 (97%)
Query: 441 ILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 500
++ +IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL
Sbjct: 198 VVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 257
Query: 501 MELLNQMDGFDSL 513
MELLNQMDGFD+L
Sbjct: 258 MELLNQMDGFDTL 270
Score = 93 (37.8 bits), Expect = 5.0e-104, Sum P(3) = 5.0e-104
Identities = 17/24 (70%), Positives = 20/24 (83%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLRE 33
R K LQDYRKKL EH E++GRL+E
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKE 28
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 623 (224.4 bits), Expect = 5.0e-104, Sum P(3) = 5.0e-104
Identities = 124/146 (84%), Positives = 132/146 (90%)
Query: 19 KKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDP 78
K+LTE E + + TNGPRYVVGCRRQLDK+KLK GTRVALDMTTLTIMRYLPREVDP
Sbjct: 62 KQLTE----EKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDP 117
Query: 79 LVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPG 138
LVYNMSHEDPG+++YS IGGLSEQIRELREVIELPL NPELFQRVGI PPKGCLLYGPPG
Sbjct: 118 LVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPG 177
Query: 139 TGKTLLARAVASQLDANFLKVVSRTI 164
TGKTLLARAVASQLD NFLKVVS +I
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSI 203
Score = 348 (127.6 bits), Expect = 5.0e-104, Sum P(3) = 5.0e-104
Identities = 67/73 (91%), Positives = 71/73 (97%)
Query: 441 ILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 500
++ +IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL
Sbjct: 198 VVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 257
Query: 501 MELLNQMDGFDSL 513
MELLNQMDGFD+L
Sbjct: 258 MELLNQMDGFDTL 270
Score = 93 (37.8 bits), Expect = 5.0e-104, Sum P(3) = 5.0e-104
Identities = 17/24 (70%), Positives = 20/24 (83%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLRE 33
R K LQDYRKKL EH E++GRL+E
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKE 28
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 623 (224.4 bits), Expect = 5.0e-104, Sum P(3) = 5.0e-104
Identities = 124/146 (84%), Positives = 132/146 (90%)
Query: 19 KKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDP 78
K+LTE E + + TNGPRYVVGCRRQLDK+KLK GTRVALDMTTLTIMRYLPREVDP
Sbjct: 62 KQLTE----EKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDP 117
Query: 79 LVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPG 138
LVYNMSHEDPG+++YS IGGLSEQIRELREVIELPL NPELFQRVGI PPKGCLLYGPPG
Sbjct: 118 LVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPG 177
Query: 139 TGKTLLARAVASQLDANFLKVVSRTI 164
TGKTLLARAVASQLD NFLKVVS +I
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSI 203
Score = 348 (127.6 bits), Expect = 5.0e-104, Sum P(3) = 5.0e-104
Identities = 67/73 (91%), Positives = 71/73 (97%)
Query: 441 ILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 500
++ +IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL
Sbjct: 198 VVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 257
Query: 501 MELLNQMDGFDSL 513
MELLNQMDGFD+L
Sbjct: 258 MELLNQMDGFDTL 270
Score = 93 (37.8 bits), Expect = 5.0e-104, Sum P(3) = 5.0e-104
Identities = 17/24 (70%), Positives = 20/24 (83%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLRE 33
R K LQDYRKKL EH E++GRL+E
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKE 28
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 623 (224.4 bits), Expect = 5.0e-104, Sum P(3) = 5.0e-104
Identities = 124/146 (84%), Positives = 132/146 (90%)
Query: 19 KKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDP 78
K+LTE E + + TNGPRYVVGCRRQLDK+KLK GTRVALDMTTLTIMRYLPREVDP
Sbjct: 62 KQLTE----EKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDP 117
Query: 79 LVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPG 138
LVYNMSHEDPG+++YS IGGLSEQIRELREVIELPL NPELFQRVGI PPKGCLLYGPPG
Sbjct: 118 LVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPG 177
Query: 139 TGKTLLARAVASQLDANFLKVVSRTI 164
TGKTLLARAVASQLD NFLKVVS +I
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSI 203
Score = 348 (127.6 bits), Expect = 5.0e-104, Sum P(3) = 5.0e-104
Identities = 67/73 (91%), Positives = 71/73 (97%)
Query: 441 ILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 500
++ +IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL
Sbjct: 198 VVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 257
Query: 501 MELLNQMDGFDSL 513
MELLNQMDGFD+L
Sbjct: 258 MELLNQMDGFDTL 270
Score = 93 (37.8 bits), Expect = 5.0e-104, Sum P(3) = 5.0e-104
Identities = 17/24 (70%), Positives = 20/24 (83%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLRE 33
R K LQDYRKKL EH E++GRL+E
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKE 28
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 623 (224.4 bits), Expect = 5.0e-104, Sum P(3) = 5.0e-104
Identities = 124/146 (84%), Positives = 132/146 (90%)
Query: 19 KKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDP 78
K+LTE E + + TNGPRYVVGCRRQLDK+KLK GTRVALDMTTLTIMRYLPREVDP
Sbjct: 62 KQLTE----EKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDP 117
Query: 79 LVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPG 138
LVYNMSHEDPG+++YS IGGLSEQIRELREVIELPL NPELFQRVGI PPKGCLLYGPPG
Sbjct: 118 LVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPG 177
Query: 139 TGKTLLARAVASQLDANFLKVVSRTI 164
TGKTLLARAVASQLD NFLKVVS +I
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSI 203
Score = 348 (127.6 bits), Expect = 5.0e-104, Sum P(3) = 5.0e-104
Identities = 67/73 (91%), Positives = 71/73 (97%)
Query: 441 ILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 500
++ +IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL
Sbjct: 198 VVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 257
Query: 501 MELLNQMDGFDSL 513
MELLNQMDGFD+L
Sbjct: 258 MELLNQMDGFDTL 270
Score = 93 (37.8 bits), Expect = 5.0e-104, Sum P(3) = 5.0e-104
Identities = 17/24 (70%), Positives = 20/24 (83%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLRE 33
R K LQDYRKKL EH E++GRL+E
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKE 28
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 622 (224.0 bits), Expect = 5.0e-104, Sum P(3) = 5.0e-104
Identities = 124/146 (84%), Positives = 131/146 (89%)
Query: 19 KKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDP 78
K+LTE E + + TNGPRYVVGCRRQLDK+KLK GTRVALDMTTLTIMRYLPREVDP
Sbjct: 62 KQLTE----EKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDP 117
Query: 79 LVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPG 138
LVYNMSHEDPG ++YS IGGLSEQIRELREVIELPL NPELFQRVGI PPKGCLLYGPPG
Sbjct: 118 LVYNMSHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPG 177
Query: 139 TGKTLLARAVASQLDANFLKVVSRTI 164
TGKTLLARAVASQLD NFLKVVS +I
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSI 203
Score = 348 (127.6 bits), Expect = 5.0e-104, Sum P(3) = 5.0e-104
Identities = 67/73 (91%), Positives = 71/73 (97%)
Query: 441 ILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 500
++ +IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL
Sbjct: 198 VVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 257
Query: 501 MELLNQMDGFDSL 513
MELLNQMDGFD+L
Sbjct: 258 MELLNQMDGFDTL 270
Score = 94 (38.1 bits), Expect = 5.0e-104, Sum P(3) = 5.0e-104
Identities = 18/26 (69%), Positives = 21/26 (80%)
Query: 8 EVRHKTLQDYRKKLTEHAEVEGRLRE 33
E R K LQDYRKKL EH E++GRL+E
Sbjct: 3 ENREKGLQDYRKKLLEHKEIDGRLKE 28
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 623 (224.4 bits), Expect = 4.4e-103, Sum P(3) = 4.4e-103
Identities = 124/146 (84%), Positives = 132/146 (90%)
Query: 19 KKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDP 78
K+LTE E + + TNGPRYVVGCRRQLDK+KLK GTRVALDMTTLTIMRYLPREVDP
Sbjct: 54 KQLTE----EKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDP 109
Query: 79 LVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPG 138
LVYNMSHEDPG+++YS IGGLSEQIRELREVIELPL NPELFQRVGI PPKGCLLYGPPG
Sbjct: 110 LVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPG 169
Query: 139 TGKTLLARAVASQLDANFLKVVSRTI 164
TGKTLLARAVASQLD NFLKVVS +I
Sbjct: 170 TGKTLLARAVASQLDCNFLKVVSSSI 195
Score = 348 (127.6 bits), Expect = 4.4e-103, Sum P(3) = 4.4e-103
Identities = 67/73 (91%), Positives = 71/73 (97%)
Query: 441 ILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 500
++ +IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL
Sbjct: 190 VVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 249
Query: 501 MELLNQMDGFDSL 513
MELLNQMDGFD+L
Sbjct: 250 MELLNQMDGFDTL 262
Score = 84 (34.6 bits), Expect = 4.4e-103, Sum P(3) = 4.4e-103
Identities = 15/20 (75%), Positives = 18/20 (90%)
Query: 14 LQDYRKKLTEHAEVEGRLRE 33
LQDYRKKL EH E++GRL+E
Sbjct: 1 LQDYRKKLLEHKEIDGRLKE 20
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 580 (209.2 bits), Expect = 3.4e-97, Sum P(3) = 3.4e-97
Identities = 109/132 (82%), Positives = 122/132 (92%)
Query: 33 ETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDIT 92
+ TNGPRYVVGCRR ++K +LK GTRV+LDMTTLTIMR LPREVDPLVY MSHEDPG+I+
Sbjct: 89 KATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNIS 148
Query: 93 YSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL 152
YS +GGL+EQIRELREV+ELPL+NPELF+RVGITPPKGCLL+GPPGTGKTLLARAVASQL
Sbjct: 149 YSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQL 208
Query: 153 DANFLKVVSRTI 164
D NFLKVVS I
Sbjct: 209 DCNFLKVVSSAI 220
Score = 355 (130.0 bits), Expect = 3.4e-97, Sum P(3) = 3.4e-97
Identities = 67/75 (89%), Positives = 73/75 (97%)
Query: 441 ILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 500
++ AIVDKYIGESAR+IREMFNYARDHQPCI+FMDEIDAIGGRRFSEGTSADREIQRTL
Sbjct: 215 VVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTL 274
Query: 501 MELLNQMDGFDSLGQ 515
MELLNQ+DGFDSLG+
Sbjct: 275 MELLNQLDGFDSLGK 289
Score = 64 (27.6 bits), Expect = 3.4e-97, Sum P(3) = 3.4e-97
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 2 TTP-VVDEVRHKTLQDYRKKLTEHAEVEGRLRE 33
T P +V++ R K L YR+KL E ++E +L++
Sbjct: 13 TGPAIVEDERTKALNSYRRKLAECRDIEQKLKD 45
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 580 (209.2 bits), Expect = 3.4e-97, Sum P(3) = 3.4e-97
Identities = 109/132 (82%), Positives = 122/132 (92%)
Query: 33 ETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDIT 92
+ TNGPRYVVGCRR ++K +LK GTRV+LDMTTLTIMR LPREVDPLVY MSHEDPG+I+
Sbjct: 89 KATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNIS 148
Query: 93 YSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL 152
YS +GGL+EQIRELREV+ELPL+NPELF+RVGITPPKGCLL+GPPGTGKTLLARAVASQL
Sbjct: 149 YSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQL 208
Query: 153 DANFLKVVSRTI 164
D NFLKVVS I
Sbjct: 209 DCNFLKVVSSAI 220
Score = 355 (130.0 bits), Expect = 3.4e-97, Sum P(3) = 3.4e-97
Identities = 67/75 (89%), Positives = 73/75 (97%)
Query: 441 ILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 500
++ AIVDKYIGESAR+IREMFNYARDHQPCI+FMDEIDAIGGRRFSEGTSADREIQRTL
Sbjct: 215 VVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTL 274
Query: 501 MELLNQMDGFDSLGQ 515
MELLNQ+DGFDSLG+
Sbjct: 275 MELLNQLDGFDSLGK 289
Score = 64 (27.6 bits), Expect = 3.4e-97, Sum P(3) = 3.4e-97
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 2 TTP-VVDEVRHKTLQDYRKKLTEHAEVEGRLRE 33
T P +V++ R K L YR+KL E ++E +L++
Sbjct: 13 TGPAIVEDERTKALNSYRRKLAECRDIEQKLKD 45
>UNIPROTKB|H0YJC0 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0017111
EMBL:AL133453 HGNC:HGNC:9553 Ensembl:ENST00000556813 Uniprot:H0YJC0
Length = 262
Score = 623 (224.4 bits), Expect = 2.0e-87, Sum P(3) = 2.0e-87
Identities = 124/146 (84%), Positives = 132/146 (90%)
Query: 19 KKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDP 78
K+LTE E + + TNGPRYVVGCRRQLDK+KLK GTRVALDMTTLTIMRYLPREVDP
Sbjct: 62 KQLTE----EKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDP 117
Query: 79 LVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPG 138
LVYNMSHEDPG+++YS IGGLSEQIRELREVIELPL NPELFQRVGI PPKGCLLYGPPG
Sbjct: 118 LVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPG 177
Query: 139 TGKTLLARAVASQLDANFLKVVSRTI 164
TGKTLLARAVASQLD NFLKVVS +I
Sbjct: 178 TGKTLLARAVASQLDCNFLKVVSSSI 203
Score = 190 (71.9 bits), Expect = 2.0e-87, Sum P(3) = 2.0e-87
Identities = 36/41 (87%), Positives = 39/41 (95%)
Query: 441 ILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI 481
++ +IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI
Sbjct: 198 VVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI 238
Score = 93 (37.8 bits), Expect = 2.0e-87, Sum P(3) = 2.0e-87
Identities = 17/24 (70%), Positives = 20/24 (83%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLRE 33
R K LQDYRKKL EH E++GRL+E
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKE 28
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 542 (195.9 bits), Expect = 7.2e-86, Sum P(2) = 7.2e-86
Identities = 110/162 (67%), Positives = 128/162 (79%)
Query: 6 VDEVRHKTLQDYRKKLTE---HAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALD 62
+ E K LQ + + E + E + + ++GPRYVVGCR ++D++KLK GTRVALD
Sbjct: 46 ISEENIKALQSVGQIIGEVLKQLDEERFIVKASSGPRYVVGCRSKVDRSKLKQGTRVALD 105
Query: 63 MTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQR 122
MTTLTIMR LPREVDPLVYNMS EDPG I ++ IGGL++QIRELREVIELPL NPELFQR
Sbjct: 106 MTTLTIMRMLPREVDPLVYNMSLEDPGQINFAGIGGLNDQIRELREVIELPLKNPELFQR 165
Query: 123 VGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTI 164
VGI PPKG LLYGPPGTGKTLLARAVAS ++ NFLKVVS I
Sbjct: 166 VGIKPPKGVLLYGPPGTGKTLLARAVASSMETNFLKVVSSAI 207
Score = 336 (123.3 bits), Expect = 7.2e-86, Sum P(2) = 7.2e-86
Identities = 64/75 (85%), Positives = 71/75 (94%)
Query: 441 ILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 500
++ AIVDKYIGESARLIREMF YA++H+PCIIFMDEIDAIGGRRFSEGTSADREIQRTL
Sbjct: 202 VVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 261
Query: 501 MELLNQMDGFDSLGQ 515
MELLNQ+DGFD LG+
Sbjct: 262 MELLNQLDGFDYLGK 276
Score = 49 (22.3 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 6 VDEVRHKTLQDYRKKLTEHAEVEGRLRETTNG 37
VD R + L++Y++ L + E E +L+ G
Sbjct: 5 VDPEREQALEEYKRSLLDLREWEAKLKALRMG 36
>UNIPROTKB|H0YJS8 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR003959 Pfam:PF00004
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:AL133453 HGNC:HGNC:9553 Ensembl:ENST00000555339 Uniprot:H0YJS8
Length = 195
Score = 696 (250.1 bits), Expect = 8.2e-85, Sum P(2) = 8.2e-85
Identities = 136/159 (85%), Positives = 144/159 (90%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLRE----TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTT 65
R K LQDYRKKL EH E++GRL+E TNGPRYVVGCRRQLDK+KLK GTRVALDMTT
Sbjct: 6 RDKALQDYRKKLLEHKEIDGRLKEFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTT 65
Query: 66 LTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGI 125
LTIMRYLPREVDPLVYNMSHEDPG+++YS IGGLSEQIRELREVIELPL NPELFQRVGI
Sbjct: 66 LTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGI 125
Query: 126 TPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTI 164
PPKGCLLYGPPGTGKTLLARAVASQLD NFLKVVS +I
Sbjct: 126 IPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 164
Score = 172 (65.6 bits), Expect = 8.2e-85, Sum P(2) = 8.2e-85
Identities = 32/37 (86%), Positives = 35/37 (94%)
Query: 441 ILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDE 477
++ +IVDKYIGESARLIREMFNYARDHQPCIIFMDE
Sbjct: 159 VVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDE 195
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 485 (175.8 bits), Expect = 1.1e-84, Sum P(3) = 1.1e-84
Identities = 95/135 (70%), Positives = 113/135 (83%)
Query: 33 ETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDIT 92
+T++GPRY+VGCR + K LK+G RV+LDMTTLTIMR LPREVDPLVYNM+ +PG+I+
Sbjct: 111 KTSSGPRYIVGCRNTIKKENLKNGVRVSLDMTTLTIMRILPREVDPLVYNMTTFEPGEIS 170
Query: 93 YSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL 152
++ IGGL+EQIRELREVIELPL NPELF RVGI PPKG LLYGPPGTGKTLLA+AVA+ +
Sbjct: 171 FNGIGGLTEQIRELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVAATI 230
Query: 153 DANFLKVVSRTIAIV 167
ANF + S AIV
Sbjct: 231 GANF--IFSPASAIV 243
Score = 342 (125.4 bits), Expect = 1.1e-84, Sum P(3) = 1.1e-84
Identities = 65/71 (91%), Positives = 70/71 (98%)
Query: 445 AIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 504
AIVDKYIGESARLIREMF YA++H+PCIIFMDE+DAIGGRRFSEGTSADREIQRTLMELL
Sbjct: 241 AIVDKYIGESARLIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELL 300
Query: 505 NQMDGFDSLGQ 515
NQMDGFD+LGQ
Sbjct: 301 NQMDGFDTLGQ 311
Score = 53 (23.7 bits), Expect = 1.1e-84, Sum P(3) = 1.1e-84
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 6 VDEVRHKTLQDYRKKLTEHAEVEGRLRE 33
+D R + L ++ KL EH + + RL++
Sbjct: 40 IDPERERALSKFKDKLLEHRKWDARLKD 67
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 461 (167.3 bits), Expect = 4.5e-82, Sum P(3) = 4.5e-82
Identities = 91/130 (70%), Positives = 104/130 (80%)
Query: 36 NGPRYVVGCRRQLDKAKLK-SGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYS 94
NGPRYVV C DKA L G RV LD+TTLTI++ LPREVDP+++NM+ E PG ++Y
Sbjct: 78 NGPRYVVRCANYQDKAHLLVPGARVTLDLTTLTILKILPREVDPIIFNMTAESPGSVSYG 137
Query: 95 AIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDA 154
IGGLS QIRELREV+ELPL+ PELF RVGI PKG LLYGPPGTGKTLLARA+AS L+A
Sbjct: 138 EIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASNLEA 197
Query: 155 NFLKVVSRTI 164
NFLKVVS I
Sbjct: 198 NFLKVVSSAI 207
Score = 342 (125.4 bits), Expect = 4.5e-82, Sum P(3) = 4.5e-82
Identities = 65/75 (86%), Positives = 71/75 (94%)
Query: 441 ILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 500
++ AIVDKYIGESAR+IREMF YARDHQPC+IFMDEIDAIGGRRFSEGTSADREIQRTL
Sbjct: 202 VVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGRRFSEGTSADREIQRTL 261
Query: 501 MELLNQMDGFDSLGQ 515
MELLNQMDGFD+L +
Sbjct: 262 MELLNQMDGFDTLSK 276
Score = 52 (23.4 bits), Expect = 4.5e-82, Sum P(3) = 4.5e-82
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLRE 33
+ + LQ+YR +L EH E RL +
Sbjct: 8 KEQALQNYRDRLIEHKNAELRLNK 31
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 435 (158.2 bits), Expect = 2.7e-78, Sum P(3) = 2.7e-78
Identities = 85/151 (56%), Positives = 115/151 (76%)
Query: 20 KLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPL 79
++ + E E + + ++GPRYVVGC+ +++K+KL GTRV+LDMTTLT+M+ LP EVDPL
Sbjct: 57 QVLKQLEDEKFIVKASSGPRYVVGCKSKINKSKLVIGTRVSLDMTTLTVMKRLPCEVDPL 116
Query: 80 VYNM------SHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLL 133
V+NM S + Y+ IGGLSEQIR++REV+ELP+LNP L++RVGI PKG LL
Sbjct: 117 VFNMISDIDKSENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLL 176
Query: 134 YGPPGTGKTLLARAVASQLDANFLKVVSRTI 164
YGPPGTGKTLLARA+AS ++ NF+++V I
Sbjct: 177 YGPPGTGKTLLARAMASNINCNFMRIVVSAI 207
Score = 338 (124.0 bits), Expect = 2.7e-78, Sum P(3) = 2.7e-78
Identities = 63/74 (85%), Positives = 71/74 (95%)
Query: 441 ILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 500
I++ AIVDKYIGESAR+IREMFNYA++HQPCIIFMDEIDAIGGRRFS+GTSADREIQRTL
Sbjct: 202 IVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRFSQGTSADREIQRTL 261
Query: 501 MELLNQMDGFDSLG 514
MELLN +DGF+ LG
Sbjct: 262 MELLNHLDGFEELG 275
Score = 46 (21.3 bits), Expect = 2.7e-78, Sum P(3) = 2.7e-78
Identities = 7/22 (31%), Positives = 17/22 (77%)
Query: 12 KTLQDYRKKLTEHAEVEGRLRE 33
++++ Y KK+ EH E+E ++++
Sbjct: 5 ESIKLYVKKVIEHREIESKVKK 26
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 435 (158.2 bits), Expect = 2.7e-78, Sum P(3) = 2.7e-78
Identities = 85/151 (56%), Positives = 115/151 (76%)
Query: 20 KLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPL 79
++ + E E + + ++GPRYVVGC+ +++K+KL GTRV+LDMTTLT+M+ LP EVDPL
Sbjct: 57 QVLKQLEDEKFIVKASSGPRYVVGCKSKINKSKLVIGTRVSLDMTTLTVMKRLPCEVDPL 116
Query: 80 VYNM------SHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLL 133
V+NM S + Y+ IGGLSEQIR++REV+ELP+LNP L++RVGI PKG LL
Sbjct: 117 VFNMISDIDKSENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLL 176
Query: 134 YGPPGTGKTLLARAVASQLDANFLKVVSRTI 164
YGPPGTGKTLLARA+AS ++ NF+++V I
Sbjct: 177 YGPPGTGKTLLARAMASNINCNFMRIVVSAI 207
Score = 338 (124.0 bits), Expect = 2.7e-78, Sum P(3) = 2.7e-78
Identities = 63/74 (85%), Positives = 71/74 (95%)
Query: 441 ILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 500
I++ AIVDKYIGESAR+IREMFNYA++HQPCIIFMDEIDAIGGRRFS+GTSADREIQRTL
Sbjct: 202 IVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRFSQGTSADREIQRTL 261
Query: 501 MELLNQMDGFDSLG 514
MELLN +DGF+ LG
Sbjct: 262 MELLNHLDGFEELG 275
Score = 46 (21.3 bits), Expect = 2.7e-78, Sum P(3) = 2.7e-78
Identities = 7/22 (31%), Positives = 17/22 (77%)
Query: 12 KTLQDYRKKLTEHAEVEGRLRE 33
++++ Y KK+ EH E+E ++++
Sbjct: 5 ESIKLYVKKVIEHREIESKVKK 26
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 471 (170.9 bits), Expect = 5.9e-78, Sum P(2) = 5.9e-78
Identities = 92/139 (66%), Positives = 113/139 (81%)
Query: 19 KKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDP 78
K+L+E E + + ++GPRY+VG R +D++KLK G RV LD+TTLTIMR LPRE DP
Sbjct: 110 KELSE----EKYIVKASSGPRYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDP 165
Query: 79 LVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPG 138
LVYNM+ + G+IT+ IGGL+EQIRELREVIELPL NPE+FQRVGI PPKG LLYGPPG
Sbjct: 166 LVYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPG 225
Query: 139 TGKTLLARAVASQLDANFL 157
TGKTLLA+AVA+ + ANF+
Sbjct: 226 TGKTLLAKAVAATIGANFI 244
Score = 332 (121.9 bits), Expect = 5.9e-78, Sum P(2) = 5.9e-78
Identities = 68/92 (73%), Positives = 76/92 (82%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + IG I A IVDKYIGESAR+IREMF YA++H+PCIIFMDE+DAIGG
Sbjct: 229 TLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGG 288
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDSLGQ 515
RRFSEGTSADREIQRTLMELL QMDGFD+LGQ
Sbjct: 289 RRFSEGTSADREIQRTLMELLTQMDGFDNLGQ 320
Score = 51 (23.0 bits), Expect = 9.0e-34, Sum P(2) = 9.0e-34
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 8 EVRHKTLQDYRKKLTEHAEVEGRLRE 33
E +K L +++KL EH + +L++
Sbjct: 51 EAHNKALNQFKRKLLEHRRYDDQLKQ 76
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 643 (231.4 bits), Expect = 6.0e-72, Sum P(2) = 6.0e-72
Identities = 128/146 (87%), Positives = 134/146 (91%)
Query: 19 KKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDP 78
K+LTE + + TNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDP
Sbjct: 70 KQLTEDKFIV----KATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDP 125
Query: 79 LVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPG 138
LVYNMSHEDPGD+TYSAIGGL++QIRELREVIELPLLNPELF RVGITPPKGCLLYGPPG
Sbjct: 126 LVYNMSHEDPGDVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPG 185
Query: 139 TGKTLLARAVASQLDANFLKVVSRTI 164
TGKTLLARAVASQLDANFLKVVS I
Sbjct: 186 TGKTLLARAVASQLDANFLKVVSSAI 211
Score = 366 (133.9 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
Identities = 74/92 (80%), Positives = 81/92 (88%)
Query: 426 TILFHEIPHEI-GDFA-ILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + ++ +F ++ AIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
Sbjct: 189 TLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 248
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDSLGQ 515
RRFSEGTSADREIQRTLMELLNQMDGFDSLGQ
Sbjct: 249 RRFSEGTSADREIQRTLMELLNQMDGFDSLGQ 280
Score = 103 (41.3 bits), Expect = 6.0e-72, Sum P(2) = 6.0e-72
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 3 TPVVDEVRHKTLQDYRKKLTEHAEVEGRLRE 33
TP+ D +R K L +YRKKL EH E+EGRL+E
Sbjct: 6 TPMPDNLRVKALSEYRKKLLEHKEIEGRLKE 36
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 108/132 (81%), Positives = 123/132 (93%)
Query: 33 ETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDIT 92
+ +NGPRYVVGCRRQ++K KLK GTRVALD+TTLTIMRYLPREVDPLVYNM+HEDPG++
Sbjct: 81 KASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPREVDPLVYNMTHEDPGNVN 140
Query: 93 YSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL 152
Y+ IGGL +QIRELREVIELPLLNP++F RVGI+PPKGCLLYGPPGTGKTLLARA+ASQ+
Sbjct: 141 YAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQM 200
Query: 153 DANFLKVVSRTI 164
DANFLKVVS I
Sbjct: 201 DANFLKVVSSAI 212
Score = 355 (130.0 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 426 TILFHEIPHEI-GDFA-ILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L I ++ +F ++ AIVDKYIGESARLIREMF YARDHQPCIIFMDEIDAIGG
Sbjct: 190 TLLARAIASQMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGG 249
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDSLGQ 515
RRFSEGTSADREIQRTLMELLNQMDGFD+LGQ
Sbjct: 250 RRFSEGTSADREIQRTLMELLNQMDGFDALGQ 281
Score = 74 (31.1 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 1 MTTPVVDEVRHKTLQDYRKKLTEHAEVEGRLRETTNGPRY-VVGCRRQLDKAKLKS 55
+ P D+ R + L +YR KL EH E+E +L+ + +Y VV + + LK+
Sbjct: 5 LANPPTDDERVRALTNYRTKLLEHREIESKLKALRD--KYKVVNAEYEKSEDDLKA 58
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 547 (197.6 bits), Expect = 9.9e-56, Sum P(2) = 9.9e-56
Identities = 103/132 (78%), Positives = 118/132 (89%)
Query: 33 ETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDIT 92
+ ++GPRYVVGCR ++DK KL SGTRV LDMTTLTIMR LPREVDP+VYNM HEDPG+++
Sbjct: 79 KASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVS 138
Query: 93 YSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL 152
YSA+GGLS+QIRELRE IELPL+NPELF RVGI PPKG LLYGPPGTGKTLLARA+AS +
Sbjct: 139 YSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNI 198
Query: 153 DANFLKVVSRTI 164
DANFLK+VS I
Sbjct: 199 DANFLKIVSSAI 210
Score = 350 (128.3 bits), Expect = 5.0e-35, Sum P(2) = 5.0e-35
Identities = 72/92 (78%), Positives = 78/92 (84%)
Query: 426 TILFHEIPHEI-GDFA-ILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L I I +F I+ AI+DKYIGESARLIREMF YARDHQPCIIFMDEIDAIGG
Sbjct: 188 TLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGG 247
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDSLGQ 515
RRFSEGTSADREIQRTLMELLNQ+DGFD LG+
Sbjct: 248 RRFSEGTSADREIQRTLMELLNQLDGFDELGK 279
Score = 45 (20.9 bits), Expect = 9.9e-56, Sum P(2) = 9.9e-56
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRL 31
R ++ +YRKKL E+E R+
Sbjct: 12 RRASVTEYRKKLLNCRELESRV 33
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 104/132 (78%), Positives = 117/132 (88%)
Query: 33 ETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDIT 92
+ ++GPRYVVGCR ++DK KL SGTRV LDMTTLTIMR LPREVDP+VYNM HEDPG+I+
Sbjct: 78 KASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNIS 137
Query: 93 YSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL 152
YSA+GGL +QIRELRE IELPL+NPELF RVGI PPKG LLYGPPGTGKTLLARA+AS +
Sbjct: 138 YSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNI 197
Query: 153 DANFLKVVSRTI 164
DANFLKVVS I
Sbjct: 198 DANFLKVVSSAI 209
Score = 352 (129.0 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
Identities = 71/92 (77%), Positives = 80/92 (86%)
Query: 426 TILFHEIPHEI-GDFA-ILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L I I +F ++ AI+DKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGG
Sbjct: 187 TLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGG 246
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDSLGQ 515
RRFSEGTSADREIQRTLMELLNQ+DGFD+LG+
Sbjct: 247 RRFSEGTSADREIQRTLMELLNQLDGFDNLGK 278
Score = 79 (32.9 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 3 TPVVDEVRHKT--LQDYRKKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAK--LKS 55
T V + VR +T + +YRKKL +H E+E R+R R G +++ +K + LKS
Sbjct: 2 TDVDESVRRRTAAVSEYRKKLLQHKELESRVRTARENLR---GAKKEFNKTEDDLKS 55
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 104/132 (78%), Positives = 117/132 (88%)
Query: 33 ETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDIT 92
+ ++GPRYVVGCR ++DK KL SGTRV LDMTTLTIMR LPREVDP+VYNM HEDPG+I+
Sbjct: 78 KASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNIS 137
Query: 93 YSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL 152
YSA+GGL +QIRELRE IELPL+NPELF RVGI PPKG LLYGPPGTGKTLLARA+AS +
Sbjct: 138 YSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNI 197
Query: 153 DANFLKVVSRTI 164
DANFLKVVS I
Sbjct: 198 DANFLKVVSSAI 209
Score = 351 (128.6 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 71/92 (77%), Positives = 79/92 (85%)
Query: 426 TILFHEIPHEI-GDFA-ILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L I I +F ++ AI+DKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGG
Sbjct: 187 TLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGG 246
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDSLGQ 515
RRFSEGTSADREIQRTLMELLNQ+DGFD LG+
Sbjct: 247 RRFSEGTSADREIQRTLMELLNQLDGFDQLGK 278
Score = 68 (29.0 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 7 DEVRHKT--LQDYRKKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAK--LKS 55
D R +T + DYRKKL H E+E R+R R +++ +K + LKS
Sbjct: 6 DAARRRTAAVTDYRKKLLHHKELESRVRTARENLR---AAKKEFNKTEDDLKS 55
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 328 (120.5 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 64/122 (52%), Positives = 85/122 (69%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VVG +L ++ G RV +D I LP +DP V M+ E+ D+TYS +GG
Sbjct: 131 KFVVGLGERLSPTDIEEGMRVGVDRHKYEIQLPLPPRIDPSVTMMTVEEKPDVTYSDVGG 190
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
EQI +LREV+ELPLL+PE F ++GI PPKG LLYGPPGTGKTL ARAVA++ DA F++
Sbjct: 191 CKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIR 250
Query: 159 VV 160
V+
Sbjct: 251 VI 252
Score = 229 (85.7 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 39/69 (56%), Positives = 52/69 (75%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KY+GE AR++RE+F AR + CIIF DE+DAIGG RF +G D E+QRT++EL+
Sbjct: 256 LVQKYVGEGARMVRELFEMARTKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELIT 315
Query: 506 QMDGFDSLG 514
Q+DGFD G
Sbjct: 316 QLDGFDPRG 324
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 315 (115.9 bits), Expect = 3.3e-51, Sum P(2) = 3.3e-51
Identities = 60/122 (49%), Positives = 86/122 (70%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VVG ++ ++ G RV +D I LP ++DP V M+ E+ D+TY+ +GG
Sbjct: 113 KFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
EQI ++REV+ELP+L+PE F ++GI PPKG L YGPPGTGKTLLARAVA++ DA F++
Sbjct: 173 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 232
Query: 159 VV 160
V+
Sbjct: 233 VI 234
Score = 234 (87.4 bits), Expect = 3.3e-51, Sum P(2) = 3.3e-51
Identities = 38/69 (55%), Positives = 54/69 (78%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KY+GE AR++RE+F AR + CI+F DE+DAIGG RF +G D E+QRT++E++N
Sbjct: 238 LVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVN 297
Query: 506 QMDGFDSLG 514
Q+DGFD+ G
Sbjct: 298 QLDGFDARG 306
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 320 (117.7 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
Identities = 66/121 (54%), Positives = 82/121 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
+YVV + +D KL TRVAL + + LP +VDPLV M E D TY IGG
Sbjct: 106 KYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGG 165
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++
Sbjct: 166 LDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 225
Query: 159 V 159
V
Sbjct: 226 V 226
Score = 217 (81.4 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
Identities = 43/90 (47%), Positives = 61/90 (67%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + +V KYIGE +R++RE+F AR+H P IIFMDEID+IG
Sbjct: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
Query: 484 RRFSEGT-SADREIQRTLMELLNQMDGFDS 512
R G+ + D E+QRT++ELLNQ+DGF++
Sbjct: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEA 298
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 320 (117.7 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
Identities = 65/121 (53%), Positives = 83/121 (68%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV +D AKL TR AL + T+ R LP ++DPLV M E D TY +GG
Sbjct: 90 KFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILPNKIDPLVSLMKVEKIPDSTYDMVGG 149
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++
Sbjct: 150 LDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 209
Query: 159 V 159
V
Sbjct: 210 V 210
Score = 216 (81.1 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
Identities = 44/90 (48%), Positives = 60/90 (66%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + +V KYIGE +R++RE+F AR+H P IIFMDEID+IG
Sbjct: 193 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGS 252
Query: 484 RRFSEGTSA-DREIQRTLMELLNQMDGFDS 512
R G+ D E+QRT++ELLNQ+DGF+S
Sbjct: 253 SRGESGSGGGDSEVQRTMLELLNQLDGFES 282
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 318 (117.0 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 65/121 (53%), Positives = 82/121 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
+YVV + +D K+ TRVAL + + LP +VDPLV M E D TY IGG
Sbjct: 106 KYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGG 165
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++
Sbjct: 166 LDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 225
Query: 159 V 159
V
Sbjct: 226 V 226
Score = 217 (81.4 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 43/90 (47%), Positives = 61/90 (67%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + +V KYIGE +R++RE+F AR+H P IIFMDEID+IG
Sbjct: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
Query: 484 RRFSEGT-SADREIQRTLMELLNQMDGFDS 512
R G+ + D E+QRT++ELLNQ+DGF++
Sbjct: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEA 298
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 100/132 (75%), Positives = 113/132 (85%)
Query: 33 ETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDIT 92
+ ++GPRYVVGCR +D++ L G RV+LDMTTLTIMR LPREVDPLVYNMS EDPGDI+
Sbjct: 71 KASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVYNMSIEDPGDIS 130
Query: 93 YSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL 152
++ +GGL+EQIRELREVIELPL NPELF RVGI PPKG LLYGPPGTGKTLLARAVA+ L
Sbjct: 131 FAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASL 190
Query: 153 DANFLKVVSRTI 164
NFLKVVS I
Sbjct: 191 GVNFLKVVSSAI 202
Score = 344 (126.2 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 68/92 (73%), Positives = 79/92 (85%)
Query: 426 TILFHEIPHEIG-DFA-ILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + +G +F ++ AIVDKYIGESAR+IREMF YA++H+PC+IFMDEIDAIGG
Sbjct: 180 TLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGG 239
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDSLGQ 515
RRFSEGTSADREIQRTLMELLNQMDGFD LGQ
Sbjct: 240 RRFSEGTSADREIQRTLMELLNQMDGFDYLGQ 271
Score = 48 (22.0 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAK 52
R L+ Y+ L +H E + +L++ G R +V ++ DK +
Sbjct: 4 RDTALEKYKSYLLQHREWDSKLKDLRFGNRDLV---KKYDKTE 43
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 322 (118.4 bits), Expect = 2.3e-49, Sum P(2) = 2.3e-49
Identities = 62/122 (50%), Positives = 85/122 (69%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VVG ++ ++ G RV +D + I LP +DP V M+ E+ D+TYS +GG
Sbjct: 154 KFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGG 213
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
+QI +LREV+ELPLL+PE F +GI PPKG LLYGPPGTGKTL ARAVA++ DA F++
Sbjct: 214 CKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIR 273
Query: 159 VV 160
V+
Sbjct: 274 VI 275
Score = 229 (85.7 bits), Expect = 2.3e-49, Sum P(2) = 2.3e-49
Identities = 39/69 (56%), Positives = 52/69 (75%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KY+GE AR++RE+F AR + CIIF DEIDA+GG RF +G D E+QRT++EL+
Sbjct: 279 LVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELIT 338
Query: 506 QMDGFDSLG 514
Q+DGFD G
Sbjct: 339 QLDGFDPRG 347
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 313 (115.2 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 62/122 (50%), Positives = 85/122 (69%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VVG ++ + ++ G RV +D T I LP ++DP V M+ E+ DITY+ IGG
Sbjct: 107 KFVVGLGDKVAPSDIEEGMRVGVDRTKYKIQILLPPKIDPSVTMMTVEEKPDITYNDIGG 166
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
EQ+ +LREV+E+PLL PE F +GI PPKG LLYGPPGTGKTL ARA+A++ DA F+
Sbjct: 167 CKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFIC 226
Query: 159 VV 160
V+
Sbjct: 227 VI 228
Score = 218 (81.8 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 36/69 (52%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KY+GE AR++RE+F A+ + CI+F+DE+DAIGG R E D E+QRT++E++N
Sbjct: 232 LVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVN 291
Query: 506 QMDGFDSLG 514
Q+DGFD+ G
Sbjct: 292 QLDGFDNRG 300
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 313 (115.2 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 62/122 (50%), Positives = 85/122 (69%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VVG ++ + ++ G RV +D T I LP ++DP V M+ E+ DITY+ IGG
Sbjct: 107 KFVVGLGDKVAPSDIEEGMRVGVDRTKYKIQILLPPKIDPSVTMMTVEEKPDITYNDIGG 166
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
EQ+ +LREV+E+PLL PE F +GI PPKG LLYGPPGTGKTL ARA+A++ DA F+
Sbjct: 167 CKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFIC 226
Query: 159 VV 160
V+
Sbjct: 227 VI 228
Score = 218 (81.8 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 36/69 (52%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KY+GE AR++RE+F A+ + CI+F+DE+DAIGG R E D E+QRT++E++N
Sbjct: 232 LVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVN 291
Query: 506 QMDGFDSLG 514
Q+DGFD+ G
Sbjct: 292 QLDGFDNRG 300
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 311 (114.5 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 63/121 (52%), Positives = 83/121 (68%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
+YVV +D ++K RVAL + +++ LP +VDPLV M E D TY +GG
Sbjct: 90 KYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGG 149
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++
Sbjct: 150 LEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIR 209
Query: 159 V 159
V
Sbjct: 210 V 210
Score = 218 (81.8 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 45/90 (50%), Positives = 61/90 (67%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + +V KYIGE +R++RE+F AR+H P IIFMDEID+IG
Sbjct: 193 TLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 252
Query: 484 RRF-SEGTSADREIQRTLMELLNQMDGFDS 512
R S G S D E+QRT++ELLNQ+DGF++
Sbjct: 253 SRSDSSGGSGDSEVQRTMLELLNQLDGFEA 282
Score = 38 (18.4 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 98 GLSEQIRELREVIEL 112
GL+ ++R LRE I+L
Sbjct: 47 GLNARVRLLREEIQL 61
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 306 (112.8 bits), Expect = 5.6e-49, Sum P(2) = 5.6e-49
Identities = 63/121 (52%), Positives = 82/121 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV + +D + RVAL + T+ + LP +VDPLV M E D TY IGG
Sbjct: 100 KFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGG 159
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++
Sbjct: 160 LDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 219
Query: 159 V 159
V
Sbjct: 220 V 220
Score = 222 (83.2 bits), Expect = 5.6e-49, Sum P(2) = 5.6e-49
Identities = 43/89 (48%), Positives = 60/89 (67%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + +V K+IGE AR++RE+F AR+H P IIFMDEID+IG
Sbjct: 203 TLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 262
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
R G+ D E+QRT++ELLNQ+DGF++
Sbjct: 263 SRLEGGSGGDSEVQRTMLELLNQLDGFEA 291
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 306 (112.8 bits), Expect = 5.6e-49, Sum P(2) = 5.6e-49
Identities = 63/121 (52%), Positives = 82/121 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV + +D + RVAL + T+ + LP +VDPLV M E D TY IGG
Sbjct: 94 KFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGG 153
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++
Sbjct: 154 LDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 213
Query: 159 V 159
V
Sbjct: 214 V 214
Score = 222 (83.2 bits), Expect = 5.6e-49, Sum P(2) = 5.6e-49
Identities = 43/89 (48%), Positives = 60/89 (67%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + +V K+IGE AR++RE+F AR+H P IIFMDEID+IG
Sbjct: 197 TLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 256
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
R G+ D E+QRT++ELLNQ+DGF++
Sbjct: 257 SRLEGGSGGDSEVQRTMLELLNQLDGFEA 285
>UNIPROTKB|E2RM61 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074947
EMBL:AAEX03006359 ProteinModelPortal:E2RM61 PRIDE:E2RM61
Ensembl:ENSCAFT00000020231 OMA:DSNCELQ NextBio:20855489
Uniprot:E2RM61
Length = 251
Score = 306 (112.8 bits), Expect = 5.6e-49, Sum P(2) = 5.6e-49
Identities = 63/121 (52%), Positives = 82/121 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV + +D + RVAL + T+ + LP +VDPLV M E D TY IGG
Sbjct: 45 KFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGG 104
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++
Sbjct: 105 LDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 164
Query: 159 V 159
V
Sbjct: 165 V 165
Score = 222 (83.2 bits), Expect = 5.6e-49, Sum P(2) = 5.6e-49
Identities = 43/89 (48%), Positives = 60/89 (67%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + +V K+IGE AR++RE+F AR+H P IIFMDEID+IG
Sbjct: 148 TLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 207
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
R G+ D E+QRT++ELLNQ+DGF++
Sbjct: 208 SRLEGGSGGDSEVQRTMLELLNQLDGFEA 236
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 306 (112.8 bits), Expect = 5.6e-49, Sum P(2) = 5.6e-49
Identities = 63/121 (52%), Positives = 82/121 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV + +D + RVAL + T+ + LP +VDPLV M E D TY IGG
Sbjct: 94 KFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGG 153
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++
Sbjct: 154 LDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 213
Query: 159 V 159
V
Sbjct: 214 V 214
Score = 222 (83.2 bits), Expect = 5.6e-49, Sum P(2) = 5.6e-49
Identities = 43/89 (48%), Positives = 60/89 (67%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + +V K+IGE AR++RE+F AR+H P IIFMDEID+IG
Sbjct: 197 TLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 256
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
R G+ D E+QRT++ELLNQ+DGF++
Sbjct: 257 SRLEGGSGGDSEVQRTMLELLNQLDGFEA 285
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 306 (112.8 bits), Expect = 5.6e-49, Sum P(2) = 5.6e-49
Identities = 63/121 (52%), Positives = 82/121 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV + +D + RVAL + T+ + LP +VDPLV M E D TY IGG
Sbjct: 94 KFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGG 153
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++
Sbjct: 154 LDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 213
Query: 159 V 159
V
Sbjct: 214 V 214
Score = 222 (83.2 bits), Expect = 5.6e-49, Sum P(2) = 5.6e-49
Identities = 43/89 (48%), Positives = 60/89 (67%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + +V K+IGE AR++RE+F AR+H P IIFMDEID+IG
Sbjct: 197 TLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 256
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
R G+ D E+QRT++ELLNQ+DGF++
Sbjct: 257 SRLEGGSGGDSEVQRTMLELLNQLDGFEA 285
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 306 (112.8 bits), Expect = 5.6e-49, Sum P(2) = 5.6e-49
Identities = 63/121 (52%), Positives = 82/121 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV + +D + RVAL + T+ + LP +VDPLV M E D TY IGG
Sbjct: 94 KFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGG 153
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++
Sbjct: 154 LDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 213
Query: 159 V 159
V
Sbjct: 214 V 214
Score = 222 (83.2 bits), Expect = 5.6e-49, Sum P(2) = 5.6e-49
Identities = 43/89 (48%), Positives = 60/89 (67%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + +V K+IGE AR++RE+F AR+H P IIFMDEID+IG
Sbjct: 197 TLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 256
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
R G+ D E+QRT++ELLNQ+DGF++
Sbjct: 257 SRLEGGSGGDSEVQRTMLELLNQLDGFEA 285
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 306 (112.8 bits), Expect = 5.6e-49, Sum P(2) = 5.6e-49
Identities = 63/121 (52%), Positives = 82/121 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV + +D + RVAL + T+ + LP +VDPLV M E D TY IGG
Sbjct: 102 KFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGG 161
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++
Sbjct: 162 LDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 221
Query: 159 V 159
V
Sbjct: 222 V 222
Score = 222 (83.2 bits), Expect = 5.6e-49, Sum P(2) = 5.6e-49
Identities = 43/89 (48%), Positives = 60/89 (67%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + +V K+IGE AR++RE+F AR+H P IIFMDEID+IG
Sbjct: 205 TLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 264
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
R G+ D E+QRT++ELLNQ+DGF++
Sbjct: 265 SRLEGGSGGDSEVQRTMLELLNQLDGFEA 293
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 306 (112.8 bits), Expect = 5.6e-49, Sum P(2) = 5.6e-49
Identities = 63/121 (52%), Positives = 82/121 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV + +D + RVAL + T+ + LP +VDPLV M E D TY IGG
Sbjct: 102 KFVVDIDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGG 161
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++
Sbjct: 162 LDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 221
Query: 159 V 159
V
Sbjct: 222 V 222
Score = 222 (83.2 bits), Expect = 5.6e-49, Sum P(2) = 5.6e-49
Identities = 43/89 (48%), Positives = 60/89 (67%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + +V K+IGE AR++RE+F AR+H P IIFMDEID+IG
Sbjct: 205 TLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 264
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
R G+ D E+QRT++ELLNQ+DGF++
Sbjct: 265 SRLEGGSGGDSEVQRTMLELLNQLDGFEA 293
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 306 (112.8 bits), Expect = 5.6e-49, Sum P(2) = 5.6e-49
Identities = 63/121 (52%), Positives = 82/121 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV + +D + RVAL + T+ + LP +VDPLV M E D TY IGG
Sbjct: 94 KFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGG 153
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++
Sbjct: 154 LDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 213
Query: 159 V 159
V
Sbjct: 214 V 214
Score = 222 (83.2 bits), Expect = 5.6e-49, Sum P(2) = 5.6e-49
Identities = 43/89 (48%), Positives = 60/89 (67%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + +V K+IGE AR++RE+F AR+H P IIFMDEID+IG
Sbjct: 197 TLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 256
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
R G+ D E+QRT++ELLNQ+DGF++
Sbjct: 257 SRLEGGSGGDSEVQRTMLELLNQLDGFEA 285
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 306 (112.8 bits), Expect = 5.6e-49, Sum P(2) = 5.6e-49
Identities = 63/121 (52%), Positives = 82/121 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV + +D + RVAL + T+ + LP +VDPLV M E D TY IGG
Sbjct: 94 KFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGG 153
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++
Sbjct: 154 LDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 213
Query: 159 V 159
V
Sbjct: 214 V 214
Score = 222 (83.2 bits), Expect = 5.6e-49, Sum P(2) = 5.6e-49
Identities = 43/89 (48%), Positives = 60/89 (67%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + +V K+IGE AR++RE+F AR+H P IIFMDEID+IG
Sbjct: 197 TLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 256
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
R G+ D E+QRT++ELLNQ+DGF++
Sbjct: 257 SRLEGGSGGDSEVQRTMLELLNQLDGFEA 285
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 306 (112.8 bits), Expect = 5.6e-49, Sum P(2) = 5.6e-49
Identities = 63/121 (52%), Positives = 82/121 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV + +D + RVAL + T+ + LP +VDPLV M E D TY IGG
Sbjct: 94 KFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGG 153
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++
Sbjct: 154 LDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 213
Query: 159 V 159
V
Sbjct: 214 V 214
Score = 222 (83.2 bits), Expect = 5.6e-49, Sum P(2) = 5.6e-49
Identities = 43/89 (48%), Positives = 60/89 (67%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + +V K+IGE AR++RE+F AR+H P IIFMDEID+IG
Sbjct: 197 TLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 256
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
R G+ D E+QRT++ELLNQ+DGF++
Sbjct: 257 SRLEGGSGGDSEVQRTMLELLNQLDGFEA 285
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 313 (115.2 bits), Expect = 1.2e-48, Sum P(2) = 1.2e-48
Identities = 60/122 (49%), Positives = 81/122 (66%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV ++ ++ G RV D I LP ++DP V M E+ D+TY +GG
Sbjct: 124 KFVVSLGERVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGG 183
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
EQI LREV+ELPLL+PE F ++GI PPKG +LYGPPGTGKTL ARAVA++ DA F++
Sbjct: 184 CKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIR 243
Query: 159 VV 160
V+
Sbjct: 244 VI 245
Score = 230 (86.0 bits), Expect = 1.2e-48, Sum P(2) = 1.2e-48
Identities = 40/69 (57%), Positives = 52/69 (75%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KY+GE AR++RE+F AR + CIIF DEIDAIGG RF +G D E+QRT++EL+
Sbjct: 249 LVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELIT 308
Query: 506 QMDGFDSLG 514
Q+DGFD G
Sbjct: 309 QLDGFDPRG 317
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 306 (112.8 bits), Expect = 1.5e-48, Sum P(2) = 1.5e-48
Identities = 66/121 (54%), Positives = 80/121 (66%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
+YVV +D KL G RVAL + + + LP VDPLV M E D TY IGG
Sbjct: 77 KYVVDIADGVDIGKLTVGKRVALLSDSYKLEKMLPSSVDPLVSLMMVEKVPDSTYDMIGG 136
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +QI+E++EVIEL L +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++
Sbjct: 137 LDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCRFIR 196
Query: 159 V 159
V
Sbjct: 197 V 197
Score = 218 (81.8 bits), Expect = 1.5e-48, Sum P(2) = 1.5e-48
Identities = 43/88 (48%), Positives = 58/88 (65%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + +V KYIGE +R++RE+F AR+H P IIFMDEID+IG
Sbjct: 180 TLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 239
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFD 511
R S D E+QRT++ELLNQ+DGF+
Sbjct: 240 SRIDSAGSGDSEVQRTMLELLNQLDGFE 267
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 306 (112.8 bits), Expect = 1.5e-48, Sum P(3) = 1.5e-48
Identities = 61/121 (50%), Positives = 83/121 (68%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
+YVV R ++ + TRVAL + + + LP +VDPLV M E D TY +GG
Sbjct: 124 KYVVDIARHINISHCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGG 183
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +Q++E++EVIELP+ +PE+F+ +GI+ PKG LLYGPPGTGKTLLARAVA D F++
Sbjct: 184 LDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 243
Query: 159 V 159
V
Sbjct: 244 V 244
Score = 226 (84.6 bits), Expect = 1.5e-48, Sum P(3) = 1.5e-48
Identities = 46/89 (51%), Positives = 61/89 (68%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + +V KYIGE +R++RE+F AR+H P IIFMDEID+IG
Sbjct: 227 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 286
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
+R EG D E+QRT+MELLNQ+DGF+S
Sbjct: 287 QRI-EGEHGDSEVQRTMMELLNQLDGFES 314
Score = 40 (19.1 bits), Expect = 1.5e-48, Sum P(3) = 1.5e-48
Identities = 8/36 (22%), Positives = 21/36 (58%)
Query: 7 DEVRHKTLQDYRKKLTEHAEVEGRLRETTNGPRYVV 42
+ + +K LQ+ ++ + E+ R+RE + +Y++
Sbjct: 62 ESIINKKLQNKKRLEAQRNELNARVRELCDEIQYLL 97
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 306 (112.8 bits), Expect = 1.5e-48, Sum P(3) = 1.5e-48
Identities = 61/121 (50%), Positives = 83/121 (68%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
+YVV R ++ + TRVAL + + + LP +VDPLV M E D TY +GG
Sbjct: 124 KYVVDIARHINISHCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGG 183
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +Q++E++EVIELP+ +PE+F+ +GI+ PKG LLYGPPGTGKTLLARAVA D F++
Sbjct: 184 LDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 243
Query: 159 V 159
V
Sbjct: 244 V 244
Score = 226 (84.6 bits), Expect = 1.5e-48, Sum P(3) = 1.5e-48
Identities = 46/89 (51%), Positives = 61/89 (68%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + +V KYIGE +R++RE+F AR+H P IIFMDEID+IG
Sbjct: 227 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 286
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
+R EG D E+QRT+MELLNQ+DGF+S
Sbjct: 287 QRI-EGEHGDSEVQRTMMELLNQLDGFES 314
Score = 40 (19.1 bits), Expect = 1.5e-48, Sum P(3) = 1.5e-48
Identities = 8/36 (22%), Positives = 21/36 (58%)
Query: 7 DEVRHKTLQDYRKKLTEHAEVEGRLRETTNGPRYVV 42
+ + +K LQ+ ++ + E+ R+RE + +Y++
Sbjct: 62 ESIINKKLQNKKRLEAQRNELNARVRELCDEIQYLL 97
>FB|FBgn0002022 [details] [associations]
symbol:Catsup "Catecholamines up" species:7227 "Drosophila
melanogaster" [GO:0007300 "ovarian nurse cell to oocyte transport"
evidence=IMP] [GO:0042069 "regulation of catecholamine metabolic
process" evidence=IMP] [GO:0030234 "enzyme regulator activity"
evidence=IMP] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0016020 "membrane" evidence=IEA] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0046873 "metal ion
transmembrane transporter activity" evidence=IEA] [GO:0030001
"metal ion transport" evidence=IEA] [GO:0007298 "border follicle
cell migration" evidence=IMP] [GO:2000274 "regulation of epithelial
cell migration, open tracheal system" evidence=IMP] [GO:0045202
"synapse" evidence=IDA] [GO:0030424 "axon" evidence=IDA]
[GO:0008021 "synaptic vesicle" evidence=IDA] [GO:0043025 "neuronal
cell body" evidence=IDA] InterPro:IPR003689 Pfam:PF02535
GO:GO:0016021 GO:GO:0030234 EMBL:AE014134 GO:GO:0030424
GO:GO:0043025 GO:GO:0008021 GO:GO:0046873 EMBL:AF216584
EMBL:AY058528 RefSeq:NP_524931.1 UniGene:Dm.12530
ProteinModelPortal:Q9V3A4 DIP:DIP-18253N IntAct:Q9V3A4
MINT:MINT-766359 STRING:Q9V3A4 PaxDb:Q9V3A4 PRIDE:Q9V3A4
EnsemblMetazoa:FBtr0081143 GeneID:48805 KEGG:dme:Dmel_CG10449
CTD:48805 FlyBase:FBgn0002022 eggNOG:COG0428
GeneTree:ENSGT00700000104299 InParanoid:Q9V3A4 KO:K14713
OMA:HRGHGHD OrthoDB:EOG4HT784 PhylomeDB:Q9V3A4 GenomeRNAi:48805
NextBio:839558 Bgee:Q9V3A4 GermOnline:CG10449 GO:GO:0007300
GO:GO:0042069 GO:GO:2000274 Uniprot:Q9V3A4
Length = 449
Score = 468 (169.8 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 108/243 (44%), Positives = 136/243 (55%)
Query: 214 HQDVKHPITLQ-VWGEALLSTILISLAPFLILFVVPLDTATGNENFLKVXXXXXXXXXXX 272
H K + + +W ++ ST+LIS APF++L+++PLD + + LKV
Sbjct: 119 HTKAKPDLDMSTIWLHSIGSTLLISAAPFVLLYIIPLDNSEAMKPRLKVLLAFASGGLLG 178
Query: 273 DAFLHLIPHAI--------GAXXXXXXXXXXXXXXXXXXXIADLSVGLWVLFGILAFLCV 324
DAFLHLIPHA G D+S+GLWVL GI+AFL V
Sbjct: 179 DAFLHLIPHATHPHSHGEHGHDHGHDHHHHHDGEEHEHGHSHDMSIGLWVLGGIIAFLSV 238
Query: 325 EKFVRYVKGGHG---HSHGKPIEKKKHTXXXXXXXXXXXXXXXXXXXYKKTKRVKAKT-S 380
EK VR +KGGHG HSHG P K K K ++K+K
Sbjct: 239 EKLVRILKGGHGGHGHSHGAP--KPKPVPAKKKSSDKEDSGDGDKPA--KPAKIKSKKPE 294
Query: 381 SQSNDDIAVAGYLNLAADFTHNFTDGLAIGASYLAGKHVGIVTTITILFHEIPHEIGDFA 440
++ ++ ++GYLNLAADF HNFTDGLAIGASYLAG +GIVTTITIL HE+PHEIGDFA
Sbjct: 295 AEPEGEVEISGYLNLAADFAHNFTDGLAIGASYLAGNSIGIVTTITILLHEVPHEIGDFA 354
Query: 441 ILI 443
ILI
Sbjct: 355 ILI 357
Score = 55 (24.4 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 20/70 (28%), Positives = 34/70 (48%)
Query: 144 LARAVASQLDANFLKVVSRTIAIVLIFAVIFLHMPNLCXXXXXXXXXXXXXXXXXKLPSF 203
+A+ VA + L++ + +V++ AV+F +P LC PSF
Sbjct: 1 MAKQVADY-QCSKLQLYQKLALVVILGAVLF-SLPALCAGQGN--------------PSF 44
Query: 204 KYSKQANEPY 213
KYS++ANE +
Sbjct: 45 KYSREANENF 54
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 309 (113.8 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 62/121 (51%), Positives = 82/121 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
+YVV + +D L +G RVAL + + + LP +VDPLV M E D TY +GG
Sbjct: 104 KYVVDVDKSIDINSLNTGARVALRADSYALHKLLPNKVDPLVSLMMVEKVPDSTYEMVGG 163
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +QI+E++EVIELP+ +PELF +GI PKG LL+GPPGTGKTLLARAVA + F++
Sbjct: 164 LDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHTECTFIR 223
Query: 159 V 159
V
Sbjct: 224 V 224
Score = 214 (80.4 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 42/89 (47%), Positives = 59/89 (66%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + +V K+IGE AR++RE+F AR+H P IIFMDEID+IG
Sbjct: 207 TLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 266
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
R + D E+QRT++ELLNQ+DGF++
Sbjct: 267 SRVEGSSGGDSEVQRTMLELLNQLDGFEA 295
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 305 (112.4 bits), Expect = 4.0e-48, Sum P(2) = 4.0e-48
Identities = 61/122 (50%), Positives = 82/122 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV Q+ ++ G RV +D I LP ++DP V M E+ D+TYS +GG
Sbjct: 111 KFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGG 170
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
EQI +LREV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++
Sbjct: 171 CKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIR 230
Query: 159 VV 160
V+
Sbjct: 231 VI 232
Score = 234 (87.4 bits), Expect = 4.0e-48, Sum P(2) = 4.0e-48
Identities = 40/69 (57%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+N
Sbjct: 236 LVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELIN 295
Query: 506 QMDGFDSLG 514
Q+DGFD G
Sbjct: 296 QLDGFDPRG 304
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 299 (110.3 bits), Expect = 7.8e-48, Sum P(2) = 7.8e-48
Identities = 61/121 (50%), Positives = 81/121 (66%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV + +D + RVAL + T+ + LP +VDPLV M E D TY +GG
Sbjct: 93 KFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGG 152
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA + F++
Sbjct: 153 LDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIR 212
Query: 159 V 159
V
Sbjct: 213 V 213
Score = 220 (82.5 bits), Expect = 7.8e-48, Sum P(2) = 7.8e-48
Identities = 42/89 (47%), Positives = 60/89 (67%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + +V K+IGE +R++RE+F AR+H P IIFMDEID+IG
Sbjct: 196 TLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 255
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
R G+ D E+QRT++ELLNQ+DGF++
Sbjct: 256 SRIESGSGGDSEVQRTMLELLNQLDGFEA 284
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 287 (106.1 bits), Expect = 9.0e-48, Sum P(2) = 9.0e-48
Identities = 57/103 (55%), Positives = 73/103 (70%)
Query: 58 RVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNP 117
RV +D I LP ++DP V M E+ D+TYS +GG EQI +LREV+E PLL+P
Sbjct: 2 RVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHP 61
Query: 118 ELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 160
E F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+
Sbjct: 62 ERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 104
Score = 234 (87.4 bits), Expect = 9.0e-48, Sum P(2) = 9.0e-48
Identities = 40/69 (57%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+N
Sbjct: 108 LVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELIN 167
Query: 506 QMDGFDSLG 514
Q+DGFD G
Sbjct: 168 QLDGFDPRG 176
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 303 (111.7 bits), Expect = 9.9e-48, Sum P(2) = 9.9e-48
Identities = 62/121 (51%), Positives = 83/121 (68%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
+YVV + ++ + +RVAL + T+ + LP +VDPLV M E D TY +GG
Sbjct: 88 KYVVDVDKTINIKDVTPSSRVALRNESYTLHKILPNKVDPLVSLMLVEKVPDSTYEMVGG 147
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +QI+E++EVIELP+ +PELF +GIT PKG LLYGPPGTGKTLLARAVA + F++
Sbjct: 148 LDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTECTFIR 207
Query: 159 V 159
V
Sbjct: 208 V 208
Score = 214 (80.4 bits), Expect = 9.9e-48, Sum P(2) = 9.9e-48
Identities = 43/89 (48%), Positives = 60/89 (67%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + +V K+IGE +R++RE+F AR+H P IIFMDEID+IG
Sbjct: 191 TLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 250
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
R GT D E+QRT++ELLNQ+DGF++
Sbjct: 251 ARLETGTG-DSEVQRTMLELLNQLDGFEA 278
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 300 (110.7 bits), Expect = 1.2e-47, Sum P(2) = 1.2e-47
Identities = 59/121 (48%), Positives = 81/121 (66%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
+++V + +D KL RV L + + + LP +VDPLV M E D TY +GG
Sbjct: 89 KFIVNVTKDIDVKKLTPSIRVCLKPDSHDLYKILPTKVDPLVSLMMVEKVPDSTYDMVGG 148
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +QI+E++EVIELP+ +PELF+ +GI PKG +LYGPPGTGKTLLARAVA + F++
Sbjct: 149 LDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTECKFIR 208
Query: 159 V 159
V
Sbjct: 209 V 209
Score = 217 (81.4 bits), Expect = 1.2e-47, Sum P(2) = 1.2e-47
Identities = 39/67 (58%), Positives = 52/67 (77%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KYIGE +R++RE+F AR+H P IIFMDEID+IG R + D E+QRT++ELLN
Sbjct: 214 LVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLN 273
Query: 506 QMDGFDS 512
Q+DGF+S
Sbjct: 274 QLDGFES 280
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 305 (112.4 bits), Expect = 1.3e-47, Sum P(2) = 1.3e-47
Identities = 61/122 (50%), Positives = 82/122 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV Q+ ++ G RV +D I LP ++DP V M E+ D+TYS +GG
Sbjct: 119 KFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGG 178
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
EQI +LREV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++
Sbjct: 179 CKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIR 238
Query: 159 VV 160
V+
Sbjct: 239 VI 240
Score = 234 (87.4 bits), Expect = 1.3e-47, Sum P(2) = 1.3e-47
Identities = 40/69 (57%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+N
Sbjct: 244 LVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELIN 303
Query: 506 QMDGFDSLG 514
Q+DGFD G
Sbjct: 304 QLDGFDPRG 312
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 305 (112.4 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 61/122 (50%), Positives = 82/122 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV Q+ ++ G RV +D I LP ++DP V M E+ D+TYS +GG
Sbjct: 120 KFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGG 179
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
EQI +LREV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++
Sbjct: 180 CKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIR 239
Query: 159 VV 160
V+
Sbjct: 240 VI 241
Score = 234 (87.4 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 40/69 (57%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+N
Sbjct: 245 LVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELIN 304
Query: 506 QMDGFDSLG 514
Q+DGFD G
Sbjct: 305 QLDGFDPRG 313
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 305 (112.4 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 61/122 (50%), Positives = 82/122 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV Q+ ++ G RV +D I LP ++DP V M E+ D+TYS +GG
Sbjct: 120 KFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGG 179
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
EQI +LREV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++
Sbjct: 180 CKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIR 239
Query: 159 VV 160
V+
Sbjct: 240 VI 241
Score = 234 (87.4 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 40/69 (57%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+N
Sbjct: 245 LVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELIN 304
Query: 506 QMDGFDSLG 514
Q+DGFD G
Sbjct: 305 QLDGFDPRG 313
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 305 (112.4 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 61/122 (50%), Positives = 82/122 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV Q+ ++ G RV +D I LP ++DP V M E+ D+TYS +GG
Sbjct: 120 KFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGG 179
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
EQI +LREV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++
Sbjct: 180 CKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIR 239
Query: 159 VV 160
V+
Sbjct: 240 VI 241
Score = 234 (87.4 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 40/69 (57%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+N
Sbjct: 245 LVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELIN 304
Query: 506 QMDGFDSLG 514
Q+DGFD G
Sbjct: 305 QLDGFDPRG 313
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 305 (112.4 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 61/122 (50%), Positives = 82/122 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV Q+ ++ G RV +D I LP ++DP V M E+ D+TYS +GG
Sbjct: 120 KFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGG 179
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
EQI +LREV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++
Sbjct: 180 CKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIR 239
Query: 159 VV 160
V+
Sbjct: 240 VI 241
Score = 234 (87.4 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 40/69 (57%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+N
Sbjct: 245 LVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELIN 304
Query: 506 QMDGFDSLG 514
Q+DGFD G
Sbjct: 305 QLDGFDPRG 313
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 305 (112.4 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 61/122 (50%), Positives = 82/122 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV Q+ ++ G RV +D I LP ++DP V M E+ D+TYS +GG
Sbjct: 120 KFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGG 179
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
EQI +LREV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++
Sbjct: 180 CKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIR 239
Query: 159 VV 160
V+
Sbjct: 240 VI 241
Score = 234 (87.4 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 40/69 (57%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+N
Sbjct: 245 LVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELIN 304
Query: 506 QMDGFDSLG 514
Q+DGFD G
Sbjct: 305 QLDGFDPRG 313
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 305 (112.4 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 61/122 (50%), Positives = 82/122 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV Q+ ++ G RV +D I LP ++DP V M E+ D+TYS +GG
Sbjct: 120 KFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGG 179
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
EQI +LREV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++
Sbjct: 180 CKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIR 239
Query: 159 VV 160
V+
Sbjct: 240 VI 241
Score = 234 (87.4 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 40/69 (57%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+N
Sbjct: 245 LVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELIN 304
Query: 506 QMDGFDSLG 514
Q+DGFD G
Sbjct: 305 QLDGFDPRG 313
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 305 (112.4 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 61/122 (50%), Positives = 82/122 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV Q+ ++ G RV +D I LP ++DP V M E+ D+TYS +GG
Sbjct: 120 KFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGG 179
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
EQI +LREV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++
Sbjct: 180 CKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIR 239
Query: 159 VV 160
V+
Sbjct: 240 VI 241
Score = 234 (87.4 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 40/69 (57%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+N
Sbjct: 245 LVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELIN 304
Query: 506 QMDGFDSLG 514
Q+DGFD G
Sbjct: 305 QLDGFDPRG 313
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 305 (112.4 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 61/122 (50%), Positives = 82/122 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV Q+ ++ G RV +D I LP ++DP V M E+ D+TYS +GG
Sbjct: 120 KFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGG 179
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
EQI +LREV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++
Sbjct: 180 CKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIR 239
Query: 159 VV 160
V+
Sbjct: 240 VI 241
Score = 234 (87.4 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 40/69 (57%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+N
Sbjct: 245 LVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELIN 304
Query: 506 QMDGFDSLG 514
Q+DGFD G
Sbjct: 305 QLDGFDPRG 313
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 305 (112.4 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
Identities = 61/122 (50%), Positives = 82/122 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV Q+ ++ G RV +D I LP ++DP V M E+ D+TYS +GG
Sbjct: 121 KFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGG 180
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
EQI +LREV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++
Sbjct: 181 CKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIR 240
Query: 159 VV 160
V+
Sbjct: 241 VI 242
Score = 234 (87.4 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
Identities = 40/69 (57%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+N
Sbjct: 246 LVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELIN 305
Query: 506 QMDGFDSLG 514
Q+DGFD G
Sbjct: 306 QLDGFDPRG 314
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 304 (112.1 bits), Expect = 1.7e-47, Sum P(2) = 1.7e-47
Identities = 61/122 (50%), Positives = 81/122 (66%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV + ++ G RV +D I LP ++DP V M ED D+TYS +GG
Sbjct: 120 KFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGG 179
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
EQI +LREV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++
Sbjct: 180 CKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIR 239
Query: 159 VV 160
V+
Sbjct: 240 VI 241
Score = 235 (87.8 bits), Expect = 1.7e-47, Sum P(2) = 1.7e-47
Identities = 40/69 (57%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+N
Sbjct: 245 LVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELIN 304
Query: 506 QMDGFDSLG 514
Q+DGFD G
Sbjct: 305 QLDGFDPRG 313
>UNIPROTKB|J3QQM1 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AC015651 ChiTaRS:PSMC5
HGNC:HGNC:9552 Ensembl:ENST00000582130 Uniprot:J3QQM1
Length = 263
Score = 302 (111.4 bits), Expect = 1.7e-47, Sum P(2) = 1.7e-47
Identities = 66/124 (53%), Positives = 82/124 (66%)
Query: 40 YVVGCRRQLDK----AKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSA 95
YV R +DK K+ RVAL + T+ + LP +VDPLV M E D TY
Sbjct: 72 YVGEVVRAMDKKKVLVKVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEM 131
Query: 96 IGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDAN 155
IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D
Sbjct: 132 IGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 191
Query: 156 FLKV 159
F++V
Sbjct: 192 FIRV 195
Score = 213 (80.0 bits), Expect = 1.7e-47, Sum P(2) = 1.7e-47
Identities = 42/86 (48%), Positives = 57/86 (66%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + +V K+IGE AR++RE+F AR+H P IIFMDEID+IG
Sbjct: 178 TLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 237
Query: 484 RRFSEGTSADREIQRTLMELLNQMDG 509
R G+ D E+QRT++ELLNQ+DG
Sbjct: 238 SRLEGGSGGDSEVQRTMLELLNQLDG 263
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 302 (111.4 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 61/122 (50%), Positives = 81/122 (66%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV Q+ ++ G RV +D I LP ++DP V M E+ D+TYS +GG
Sbjct: 120 KFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGG 179
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
EQI +LREV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F+
Sbjct: 180 CKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIP 239
Query: 159 VV 160
V+
Sbjct: 240 VI 241
Score = 234 (87.4 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 40/69 (57%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+N
Sbjct: 245 LVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELIN 304
Query: 506 QMDGFDSLG 514
Q+DGFD G
Sbjct: 305 QLDGFDPRG 313
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 302 (111.4 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 61/122 (50%), Positives = 81/122 (66%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV Q+ ++ G RV +D I LP ++DP V M E+ D+TYS +GG
Sbjct: 120 KFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGG 179
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
EQI +LREV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F+
Sbjct: 180 CKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIP 239
Query: 159 VV 160
V+
Sbjct: 240 VI 241
Score = 234 (87.4 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 40/69 (57%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+N
Sbjct: 245 LVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELIN 304
Query: 506 QMDGFDSLG 514
Q+DGFD G
Sbjct: 305 QLDGFDPRG 313
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 304 (112.1 bits), Expect = 9.8e-47, Sum P(2) = 9.8e-47
Identities = 58/103 (56%), Positives = 76/103 (73%)
Query: 58 RVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNP 117
R+++D IM LP ++DP V M+ ED D+TY +GG EQI +LREV+E+PLL+P
Sbjct: 149 RLSVDRNKYQIMLPLPPKIDPSVTMMTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLLSP 208
Query: 118 ELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 160
E F +GI PPKG LLYGPPGTGKTL ARAVA++ DA F++V+
Sbjct: 209 ERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVI 251
Score = 231 (86.4 bits), Expect = 9.8e-47, Sum P(2) = 9.8e-47
Identities = 39/69 (56%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KY+GE AR++RE+F AR + CIIF DEIDA+GG RF +G D E+QRT++EL+
Sbjct: 255 LVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELIT 314
Query: 506 QMDGFDSLG 514
Q+DGFD+ G
Sbjct: 315 QLDGFDARG 323
Score = 42 (19.8 bits), Expect = 6.5e-17, Sum P(2) = 6.5e-17
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 41 VVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG 89
V GC+ Q++K R ++M L+ R++ +DP + + PG
Sbjct: 187 VGGCKEQIEKL------REVVEMPLLSPERFVNLGIDPPKGALLYGPPG 229
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 300 (110.7 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 60/122 (49%), Positives = 81/122 (66%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV +L ++ G RV +D I LP ++D V M E+ DITY +GG
Sbjct: 115 KFVVALGDKLSPTDVEEGIRVGVDRNKYQIQIPLPPKIDASVTMMQVEEKPDITYKDVGG 174
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
EQI +LREV+E+PLL+PE F +GI PPKG L+YGPPGTGKTL ARAVA++ DA F++
Sbjct: 175 CKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVANRTDAAFVR 234
Query: 159 VV 160
V+
Sbjct: 235 VI 236
Score = 233 (87.1 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 39/69 (56%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KY+GE AR++R++F AR + CIIF DE+DAIGG RF +G D E+QRT++EL+N
Sbjct: 240 LVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELIN 299
Query: 506 QMDGFDSLG 514
Q+DGFD G
Sbjct: 300 QLDGFDPRG 308
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 311 (114.5 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 64/121 (52%), Positives = 80/121 (66%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
+Y+V +D + L +GTRVAL I LP +VDPLV M E D TY +GG
Sbjct: 120 KYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGG 179
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L QI+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA + F++
Sbjct: 180 LDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIR 239
Query: 159 V 159
V
Sbjct: 240 V 240
Score = 212 (79.7 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 42/89 (47%), Positives = 58/89 (65%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + +V K+IGE AR++RE+F AR+H P IIFMDEID+IG
Sbjct: 223 TLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 282
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
R D E+QRT++ELLNQ+DGF++
Sbjct: 283 SRVEGSRGGDSEVQRTMLELLNQLDGFEA 311
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 305 (112.4 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 61/122 (50%), Positives = 82/122 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV Q+ ++ G RV +D I LP ++DP V M E+ D+TYS +GG
Sbjct: 162 KFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGG 221
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
EQI +LREV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++
Sbjct: 222 CKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIR 281
Query: 159 VV 160
V+
Sbjct: 282 VI 283
Score = 234 (87.4 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 40/69 (57%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+N
Sbjct: 287 LVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELIN 346
Query: 506 QMDGFDSLG 514
Q+DGFD G
Sbjct: 347 QLDGFDPRG 355
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 300 (110.7 bits), Expect = 2.4e-46, Sum P(2) = 2.4e-46
Identities = 59/122 (48%), Positives = 81/122 (66%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV + ++ G RV +D I LP ++DP V M E+ D+TYS +GG
Sbjct: 122 KFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGG 181
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
+QI +LREV+E PLL+PE + +GI PPKG LLYGPPGTGKTL ARAVA++ DA F++
Sbjct: 182 CKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIR 241
Query: 159 VV 160
V+
Sbjct: 242 VI 243
Score = 232 (86.7 bits), Expect = 2.4e-46, Sum P(2) = 2.4e-46
Identities = 39/69 (56%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KY+GE AR++RE+F AR + C+IF DEIDA+GG RF +G D E+QRT++EL+N
Sbjct: 247 LVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELIN 306
Query: 506 QMDGFDSLG 514
Q+DGFD G
Sbjct: 307 QLDGFDPRG 315
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 300 (110.7 bits), Expect = 2.4e-46, Sum P(2) = 2.4e-46
Identities = 59/122 (48%), Positives = 81/122 (66%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV + ++ G RV +D I LP ++DP V M E+ D+TYS +GG
Sbjct: 122 KFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGG 181
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
+QI +LREV+E PLL+PE + +GI PPKG LLYGPPGTGKTL ARAVA++ DA F++
Sbjct: 182 CKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIR 241
Query: 159 VV 160
V+
Sbjct: 242 VI 243
Score = 232 (86.7 bits), Expect = 2.4e-46, Sum P(2) = 2.4e-46
Identities = 39/69 (56%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V KY+GE AR++RE+F AR + C+IF DEIDA+GG RF +G D E+QRT++EL+N
Sbjct: 247 LVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELIN 306
Query: 506 QMDGFDSLG 514
Q+DGFD G
Sbjct: 307 QLDGFDPRG 315
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 314 (115.6 bits), Expect = 3.1e-46, Sum P(2) = 3.1e-46
Identities = 61/128 (47%), Positives = 89/128 (69%)
Query: 33 ETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDIT 92
+++ GP ++V ++ L G RV L+ TLT++ LP D M ++ ++
Sbjct: 109 KSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVDERPNVR 168
Query: 93 YSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL 152
Y IGGL +Q++E+REV+ELPL +PELF++VGI PPKG LLYGPPGTGKTLLA+AVA++
Sbjct: 169 YEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATET 228
Query: 153 DANFLKVV 160
+A F++VV
Sbjct: 229 NATFIRVV 236
Score = 196 (74.1 bits), Expect = 3.1e-46, Sum P(2) = 3.1e-46
Identities = 37/69 (53%), Positives = 51/69 (73%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V K+IGE A L++++F A++ P IIF+DEIDAI +R T DRE+QRTLM+LL
Sbjct: 240 LVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLA 299
Query: 506 QMDGFDSLG 514
+MDGFD+ G
Sbjct: 300 EMDGFDARG 308
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 284 (105.0 bits), Expect = 4.0e-46, Sum P(2) = 4.0e-46
Identities = 60/127 (47%), Positives = 81/127 (63%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
T+ G + V +DK L+ G V L+ ++ L + DPLV M E TY
Sbjct: 52 TSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETY 111
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ IGGL QI+E++E +ELPL +PE ++ +GI PPKG +LYGPPGTGKTLLA+AVA+Q
Sbjct: 112 ADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 171
Query: 154 ANFLKVV 160
A FL+VV
Sbjct: 172 ATFLRVV 178
Score = 222 (83.2 bits), Expect = 4.0e-46, Sum P(2) = 4.0e-46
Identities = 37/69 (53%), Positives = 54/69 (78%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ KY+G+ +L+RE+F A +H P I+F+DEIDAIG +R+ + +REIQRT++ELLN
Sbjct: 182 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 241
Query: 506 QMDGFDSLG 514
Q+DGFDS G
Sbjct: 242 QLDGFDSRG 250
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 305 (112.4 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 64/127 (50%), Positives = 86/127 (67%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
T+ GP Y V +DK L+ G V L+ T +++ L EVDPLV M E +Y
Sbjct: 133 TSVGPEYYVNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSVMKVEKAPLESY 192
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ IGGL QI+E++E +ELPL +PEL++ +GI PPKG +LYGPPGTGKTLLA+AVA++
Sbjct: 193 ADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETS 252
Query: 154 ANFLKVV 160
A FL+VV
Sbjct: 253 ATFLRVV 259
Score = 221 (82.9 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 37/69 (53%), Positives = 54/69 (78%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ KY+G+ +L+REMF A +H P I+F+DEIDA+G +R+ + +REIQRT++ELLN
Sbjct: 263 LIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGEREIQRTMLELLN 322
Query: 506 QMDGFDSLG 514
Q+DGFDS G
Sbjct: 323 QLDGFDSRG 331
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 305 (112.4 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 64/127 (50%), Positives = 86/127 (67%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
T+ GP Y V +DK L+ G V L+ T +++ L EVDPLV M E +Y
Sbjct: 133 TSVGPEYYVNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSVMKVEKAPLESY 192
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ IGGL QI+E++E +ELPL +PEL++ +GI PPKG +LYGPPGTGKTLLA+AVA++
Sbjct: 193 ADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETS 252
Query: 154 ANFLKVV 160
A FL+VV
Sbjct: 253 ATFLRVV 259
Score = 221 (82.9 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 37/69 (53%), Positives = 54/69 (78%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ KY+G+ +L+REMF A +H P I+F+DEIDA+G +R+ + +REIQRT++ELLN
Sbjct: 263 LIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGEREIQRTMLELLN 322
Query: 506 QMDGFDSLG 514
Q+DGFDS G
Sbjct: 323 QLDGFDSRG 331
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 314 (115.6 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 69/156 (44%), Positives = 98/156 (62%)
Query: 5 VVDEVRHKTLQDYRKKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMT 64
+++E+R L L E + + +T GP + V +DK+KL G V L+
Sbjct: 97 IIEELRGDPLTV--GNLEEIIDDNHAIVSSTVGPEHYVRIMSFVDKSKLYLGATVLLNNK 154
Query: 65 TLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVG 124
TL+++ + EVDP+V M E +YS IGGL Q++E++E IELPL +PEL++ +G
Sbjct: 155 TLSVVGVIDGEVDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIG 214
Query: 125 ITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 160
I PPKG +LYG PGTGKTLLA+AVA+Q A FL+VV
Sbjct: 215 IKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVV 250
Score = 199 (75.1 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 33/67 (49%), Positives = 52/67 (77%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ KY+G+ +L+RE+F A + P I+F+DEIDA+G +R+ + +REIQRT++ELLN
Sbjct: 254 LIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRYDSQSGGEREIQRTMLELLN 313
Query: 506 QMDGFDS 512
Q+DGFD+
Sbjct: 314 QLDGFDA 320
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 295 (108.9 bits), Expect = 4.5e-45, Sum P(2) = 4.5e-45
Identities = 58/121 (47%), Positives = 81/121 (66%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
+Y+V + ++ LK+ RV L + + + L + DPLV M E D TY +GG
Sbjct: 93 KYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVGG 152
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L++QI+E++EVIELP+ +PELF+ +GI PKG +LYGPPGTGKTLLARAVA D F++
Sbjct: 153 LTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIR 212
Query: 159 V 159
V
Sbjct: 213 V 213
Score = 212 (79.7 bits), Expect = 4.5e-45, Sum P(2) = 4.5e-45
Identities = 42/89 (47%), Positives = 58/89 (65%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + +V KYIGE +R++RE+F AR+H P IIFMDEID+IG
Sbjct: 196 TLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 255
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
R D E+QRT++ELLNQ+DGF++
Sbjct: 256 TRVEGSGGGDSEVQRTMLELLNQLDGFET 284
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 304 (112.1 bits), Expect = 1.5e-44, Sum P(2) = 1.5e-44
Identities = 63/140 (45%), Positives = 89/140 (63%)
Query: 21 LTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLV 80
L E + + + + GP Y V +DK L+ G + L T++++ L E DPLV
Sbjct: 131 LEELIDDDHAIVSSATGPEYYVSIMSFVDKDLLEPGASILLHHKTVSVVGVLTEESDPLV 190
Query: 81 YNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTG 140
M + +Y+ IGGL QI+E+RE +ELPLL+PEL++ +GI PPKG +LYG PGTG
Sbjct: 191 SVMKLDKAPTESYADIGGLESQIQEVRESVELPLLHPELYEEMGIKPPKGVILYGAPGTG 250
Query: 141 KTLLARAVASQLDANFLKVV 160
KTLLA+AVA+Q A FL++V
Sbjct: 251 KTLLAKAVANQTSATFLRIV 270
Score = 214 (80.4 bits), Expect = 1.5e-44, Sum P(2) = 1.5e-44
Identities = 36/69 (52%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ KY+G+ RL+R++F A +H P I+F+DEIDAIG +R+ + +REIQRT++ELLN
Sbjct: 274 LIQKYLGDGPRLVRQIFQVAAEHAPSIVFIDEIDAIGTKRYDSTSGGEREIQRTMLELLN 333
Query: 506 QMDGFDSLG 514
Q+DGFD G
Sbjct: 334 QLDGFDDRG 342
>ZFIN|ZDB-GENE-991110-20 [details] [associations]
symbol:slc39a7 "solute carrier family 39 (zinc
transporter), member 7" species:7955 "Danio rerio" [GO:0030001
"metal ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0055069 "zinc ion homeostasis" evidence=IMP]
[GO:0006829 "zinc ion transport" evidence=IEA;ISS] [GO:0006810
"transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005385 "zinc
ion transmembrane transporter activity" evidence=ISS]
InterPro:IPR003689 Pfam:PF02535 ZFIN:ZDB-GENE-991110-20
GO:GO:0016020 GO:GO:0005385 HOVERGEN:HBG001037 EMBL:AY314993
IPI:IPI00498829 UniGene:Dr.3818 STRING:Q7T1M5 InParanoid:Q7T1M5
ArrayExpress:Q7T1M5 Uniprot:Q7T1M5
Length = 444
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 109/237 (45%), Positives = 136/237 (57%)
Query: 223 LQVWGEALLSTILISLAPFLILFVVPLDTATG-NENFLKVXXXXXXXXXXXDAFLHLIPH 281
+++W +A+ +T+LIS APFLILF++P+ + T ++N LKV DAFLHLIPH
Sbjct: 122 VELWMQAIGATLLISAAPFLILFLIPVQSNTDQHQNLLKVLLSFASGGLLGDAFLHLIPH 181
Query: 282 AIGAXXXXXXXXXXXXXXXXXXXIAD-----------LSVGLWVLFGILAFLCVEKFVRY 330
A+ + +SVGLWVL GI+AFL VEKFVR
Sbjct: 182 ALEPHSHHSQPHSEESHGQSHGEESHGHSHGAAHGHMMSVGLWVLGGIVAFLVVEKFVRL 241
Query: 331 VKGGHGHSHG-KP-IEKKKHTXXXXXXXXXXXXXXXXXXXYKKTKRVKAKTSSQSNDDIA 388
+KGGH HSH P K K + +K + +TSS DI
Sbjct: 242 LKGGHSHSHSHSPSAPKSKDSDEEDDKKGQKKGEKDKVVSQQKPTKKTVETSS----DIK 297
Query: 389 VAGYLNLAADFTHNFTDGLAIGASYLAGKHVGIVTTITILFHEIPHEIGDFAILIHA 445
V+GYLNLAADFTHNFTDGLAIGAS+L G VG VTTITIL HE+PHEIGDFAIL+ +
Sbjct: 298 VSGYLNLAADFTHNFTDGLAIGASFLVGPAVGAVTTITILLHEVPHEIGDFAILVQS 354
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 299 (110.3 bits), Expect = 9.5e-44, Sum P(2) = 9.5e-44
Identities = 62/121 (51%), Positives = 81/121 (66%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV + +D + RVAL + T+ + LP +VDPLV M E D TY IGG
Sbjct: 89 KFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGG 148
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +QI+E++EVIELP+ +PE F+ +GI PKG LLYGPPGTGKTLLARAVA D F++
Sbjct: 149 LDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 208
Query: 159 V 159
V
Sbjct: 209 V 209
Score = 214 (80.4 bits), Expect = 9.5e-44, Sum P(2) = 9.5e-44
Identities = 43/89 (48%), Positives = 60/89 (67%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + +V K+IGE AR++RE+F AR+H P IIFMDEID+IG
Sbjct: 192 TLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 251
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
R G+ D E+QRT++ELLNQ+DGF++
Sbjct: 252 R-LEGGSGGDSEVQRTMLELLNQLDGFEA 279
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 292 (107.8 bits), Expect = 1.0e-43, Sum P(2) = 1.0e-43
Identities = 59/127 (46%), Positives = 83/127 (65%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
+T GP Y V +DK L+ G V L ++I+ L + DP++ M + +Y
Sbjct: 131 STAGPEYYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINVMKLDKAPTESY 190
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ IGGL QI+E++E +ELPL +PEL++ +GI PPKG +LYG PGTGKTLLA+AVA+Q
Sbjct: 191 ADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTS 250
Query: 154 ANFLKVV 160
A FL+VV
Sbjct: 251 ATFLRVV 257
Score = 222 (83.2 bits), Expect = 1.0e-43, Sum P(2) = 1.0e-43
Identities = 37/67 (55%), Positives = 55/67 (82%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ KY+G+ RL+R++FN A +H P I+F+DEIDAIG +R+ + A+REIQRT++ELLN
Sbjct: 261 LIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLELLN 320
Query: 506 QMDGFDS 512
Q+DGFD+
Sbjct: 321 QLDGFDT 327
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 297 (109.6 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
Identities = 60/124 (48%), Positives = 83/124 (66%)
Query: 37 GPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAI 96
GP Y VG +DK +L+ G + + L+++ L EVDP+V M E +Y+ I
Sbjct: 131 GPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADI 190
Query: 97 GGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANF 156
GGL QI+E++E +ELPL +PEL++ +GI PPKG +LYG PGTGKTLLA+AVA+ A F
Sbjct: 191 GGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATF 250
Query: 157 LKVV 160
L+VV
Sbjct: 251 LRVV 254
Score = 212 (79.7 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
Identities = 36/69 (52%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ KY+G+ +L+RE+F A D P I+F+DEIDA+G +R+ + +REIQRT++ELLN
Sbjct: 258 LIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGEREIQRTMLELLN 317
Query: 506 QMDGFDSLG 514
Q+DGFDS G
Sbjct: 318 QLDGFDSRG 326
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 297 (109.6 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 60/124 (48%), Positives = 83/124 (66%)
Query: 37 GPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAI 96
GP Y VG +DK +L+ G + + L+++ L EVDP+V M E +Y+ I
Sbjct: 131 GPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADI 190
Query: 97 GGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANF 156
GGL QI+E++E +ELPL +PEL++ +GI PPKG +LYG PGTGKTLLA+AVA+ A F
Sbjct: 191 GGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATF 250
Query: 157 LKVV 160
L+VV
Sbjct: 251 LRVV 254
Score = 210 (79.0 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 36/69 (52%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ KY+G+ +L+RE+F A D P I+F+DEIDA+G +R+ + +REIQRT++ELLN
Sbjct: 258 LIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLN 317
Query: 506 QMDGFDSLG 514
Q+DGFDS G
Sbjct: 318 QLDGFDSRG 326
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 285 (105.4 bits), Expect = 9.5e-43, Sum P(2) = 9.5e-43
Identities = 59/127 (46%), Positives = 82/127 (64%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
T+ G + V +DK +L+ G V L+ ++ L + DP+V M E TY
Sbjct: 124 TSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETY 183
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ IGGL QI+E++E +ELPL +PE ++ +GI PPKG +LYGPPGTGKTLLA+AVA+Q
Sbjct: 184 ADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 243
Query: 154 ANFLKVV 160
A FL+VV
Sbjct: 244 ATFLRVV 250
Score = 221 (82.9 bits), Expect = 9.5e-43, Sum P(2) = 9.5e-43
Identities = 36/69 (52%), Positives = 54/69 (78%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ KY+G+ +L+RE+F A +H P I+F+DEIDA+G +R+ + +REIQRT++ELLN
Sbjct: 254 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLN 313
Query: 506 QMDGFDSLG 514
Q+DGFDS G
Sbjct: 314 QLDGFDSRG 322
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 281 (104.0 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 55/127 (43%), Positives = 82/127 (64%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
+T G YVV LD+ LK VAL + ++ LP E D + + ++ D++Y
Sbjct: 74 STTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEADSSISMLRPDERPDVSY 133
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ +GGL Q +E+RE +ELPL +L++++GI PP+G LLYGPPGTGKT+L +AVA+
Sbjct: 134 ADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTA 193
Query: 154 ANFLKVV 160
ANF++VV
Sbjct: 194 ANFIRVV 200
Score = 210 (79.0 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 39/65 (60%), Positives = 50/65 (76%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 506
V KY+GE R++R++F AR++ P IIF+DEIDAI +RF T ADRE+QR L+ELL Q
Sbjct: 205 VQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGADREVQRILIELLTQ 264
Query: 507 MDGFD 511
MDGFD
Sbjct: 265 MDGFD 269
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 284 (105.0 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 60/127 (47%), Positives = 81/127 (63%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
T+ G + V +DK L+ G V L+ ++ L + DPLV M E TY
Sbjct: 123 TSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETY 182
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ IGGL QI+E++E +ELPL +PE ++ +GI PPKG +LYGPPGTGKTLLA+AVA+Q
Sbjct: 183 ADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 242
Query: 154 ANFLKVV 160
A FL+VV
Sbjct: 243 ATFLRVV 249
Score = 222 (83.2 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 37/69 (53%), Positives = 54/69 (78%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ KY+G+ +L+RE+F A +H P I+F+DEIDAIG +R+ + +REIQRT++ELLN
Sbjct: 253 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 312
Query: 506 QMDGFDSLG 514
Q+DGFDS G
Sbjct: 313 QLDGFDSRG 321
Score = 40 (19.1 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 333 GGHGHSHGKPIEKKK 347
GGHG GK +K K
Sbjct: 5 GGHGPGGGKKDDKDK 19
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 284 (105.0 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 60/127 (47%), Positives = 81/127 (63%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
T+ G + V +DK L+ G V L+ ++ L + DPLV M E TY
Sbjct: 124 TSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETY 183
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ IGGL QI+E++E +ELPL +PE ++ +GI PPKG +LYGPPGTGKTLLA+AVA+Q
Sbjct: 184 ADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 243
Query: 154 ANFLKVV 160
A FL+VV
Sbjct: 244 ATFLRVV 250
Score = 222 (83.2 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 37/69 (53%), Positives = 54/69 (78%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ KY+G+ +L+RE+F A +H P I+F+DEIDAIG +R+ + +REIQRT++ELLN
Sbjct: 254 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 313
Query: 506 QMDGFDSLG 514
Q+DGFDS G
Sbjct: 314 QLDGFDSRG 322
Score = 40 (19.1 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 333 GGHGHSHGKPIEKKK 347
GGHG GK +K K
Sbjct: 6 GGHGPGGGKKDDKDK 20
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 284 (105.0 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 60/127 (47%), Positives = 81/127 (63%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
T+ G + V +DK L+ G V L+ ++ L + DPLV M E TY
Sbjct: 125 TSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETY 184
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ IGGL QI+E++E +ELPL +PE ++ +GI PPKG +LYGPPGTGKTLLA+AVA+Q
Sbjct: 185 ADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 244
Query: 154 ANFLKVV 160
A FL+VV
Sbjct: 245 ATFLRVV 251
Score = 222 (83.2 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 37/69 (53%), Positives = 54/69 (78%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ KY+G+ +L+RE+F A +H P I+F+DEIDAIG +R+ + +REIQRT++ELLN
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 506 QMDGFDSLG 514
Q+DGFDS G
Sbjct: 315 QLDGFDSRG 323
Score = 40 (19.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 333 GGHGHSHGKPIEKKK 347
GGHG GK +K K
Sbjct: 7 GGHGPGGGKKDDKDK 21
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 284 (105.0 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 60/127 (47%), Positives = 81/127 (63%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
T+ G + V +DK L+ G V L+ ++ L + DPLV M E TY
Sbjct: 125 TSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETY 184
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ IGGL QI+E++E +ELPL +PE ++ +GI PPKG +LYGPPGTGKTLLA+AVA+Q
Sbjct: 185 ADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 244
Query: 154 ANFLKVV 160
A FL+VV
Sbjct: 245 ATFLRVV 251
Score = 222 (83.2 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 37/69 (53%), Positives = 54/69 (78%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ KY+G+ +L+RE+F A +H P I+F+DEIDAIG +R+ + +REIQRT++ELLN
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 506 QMDGFDSLG 514
Q+DGFDS G
Sbjct: 315 QLDGFDSRG 323
Score = 40 (19.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 333 GGHGHSHGKPIEKKK 347
GGHG GK +K K
Sbjct: 7 GGHGPGGGKKDDKDK 21
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 284 (105.0 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 60/127 (47%), Positives = 81/127 (63%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
T+ G + V +DK L+ G V L+ ++ L + DPLV M E TY
Sbjct: 125 TSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETY 184
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ IGGL QI+E++E +ELPL +PE ++ +GI PPKG +LYGPPGTGKTLLA+AVA+Q
Sbjct: 185 ADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 244
Query: 154 ANFLKVV 160
A FL+VV
Sbjct: 245 ATFLRVV 251
Score = 222 (83.2 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 37/69 (53%), Positives = 54/69 (78%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ KY+G+ +L+RE+F A +H P I+F+DEIDAIG +R+ + +REIQRT++ELLN
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 506 QMDGFDSLG 514
Q+DGFDS G
Sbjct: 315 QLDGFDSRG 323
Score = 40 (19.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 333 GGHGHSHGKPIEKKK 347
GGHG GK +K K
Sbjct: 7 GGHGPGGGKKDDKDK 21
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 284 (105.0 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 60/127 (47%), Positives = 81/127 (63%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
T+ G + V +DK L+ G V L+ ++ L + DPLV M E TY
Sbjct: 125 TSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETY 184
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ IGGL QI+E++E +ELPL +PE ++ +GI PPKG +LYGPPGTGKTLLA+AVA+Q
Sbjct: 185 ADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 244
Query: 154 ANFLKVV 160
A FL+VV
Sbjct: 245 ATFLRVV 251
Score = 222 (83.2 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 37/69 (53%), Positives = 54/69 (78%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ KY+G+ +L+RE+F A +H P I+F+DEIDAIG +R+ + +REIQRT++ELLN
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 506 QMDGFDSLG 514
Q+DGFDS G
Sbjct: 315 QLDGFDSRG 323
Score = 40 (19.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 333 GGHGHSHGKPIEKKK 347
GGHG GK +K K
Sbjct: 7 GGHGPGGGKKDDKDK 21
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 284 (105.0 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 60/127 (47%), Positives = 81/127 (63%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
T+ G + V +DK L+ G V L+ ++ L + DPLV M E TY
Sbjct: 125 TSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETY 184
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ IGGL QI+E++E +ELPL +PE ++ +GI PPKG +LYGPPGTGKTLLA+AVA+Q
Sbjct: 185 ADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 244
Query: 154 ANFLKVV 160
A FL+VV
Sbjct: 245 ATFLRVV 251
Score = 222 (83.2 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 37/69 (53%), Positives = 54/69 (78%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ KY+G+ +L+RE+F A +H P I+F+DEIDAIG +R+ + +REIQRT++ELLN
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 506 QMDGFDSLG 514
Q+DGFDS G
Sbjct: 315 QLDGFDSRG 323
Score = 40 (19.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 333 GGHGHSHGKPIEKKK 347
GGHG GK +K K
Sbjct: 7 GGHGPGGGKKDDKDK 21
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 284 (105.0 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 60/127 (47%), Positives = 81/127 (63%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
T+ G + V +DK L+ G V L+ ++ L + DPLV M E TY
Sbjct: 125 TSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETY 184
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ IGGL QI+E++E +ELPL +PE ++ +GI PPKG +LYGPPGTGKTLLA+AVA+Q
Sbjct: 185 ADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 244
Query: 154 ANFLKVV 160
A FL+VV
Sbjct: 245 ATFLRVV 251
Score = 222 (83.2 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 37/69 (53%), Positives = 54/69 (78%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ KY+G+ +L+RE+F A +H P I+F+DEIDAIG +R+ + +REIQRT++ELLN
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 506 QMDGFDSLG 514
Q+DGFDS G
Sbjct: 315 QLDGFDSRG 323
Score = 40 (19.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 333 GGHGHSHGKPIEKKK 347
GGHG GK +K K
Sbjct: 7 GGHGPGGGKKDDKDK 21
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 284 (105.0 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 60/127 (47%), Positives = 81/127 (63%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
T+ G + V +DK L+ G V L+ ++ L + DPLV M E TY
Sbjct: 125 TSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKLEKAPQETY 184
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ IGGL QI+E++E +ELPL +PE ++ +GI PPKG +LYGPPGTGKTLLA+AVA+Q
Sbjct: 185 ADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 244
Query: 154 ANFLKVV 160
A FL+VV
Sbjct: 245 ATFLRVV 251
Score = 221 (82.9 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 37/69 (53%), Positives = 54/69 (78%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ KY+G+ +L+RE+F A +H P I+F+DEIDAIG +R+ + +REIQRT++ELLN
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 506 QMDGFDSLG 514
Q+DGFDS G
Sbjct: 315 QLDGFDSRG 323
Score = 40 (19.1 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 333 GGHGHSHGKPIEKKK 347
GGHG GK +K K
Sbjct: 7 GGHGPGGGKKDDKDK 21
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 284 (105.0 bits), Expect = 3.6e-42, Sum P(2) = 3.6e-42
Identities = 54/127 (42%), Positives = 84/127 (66%)
Query: 33 ETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDIT 92
+++ G YVV LD+ KLK + VAL + ++ LP E D + + + D+T
Sbjct: 105 QSSTGSNYVVRILSTLDREKLKPSSSVALHRHSNALVDILPPEADSSIAMLGENEKPDVT 164
Query: 93 YSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL 152
Y+ +GGL Q +E+RE +ELPL + +L++++GI PP+G LLYGPPGTGKT+L +AVA+
Sbjct: 165 YADVGGLDMQKQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANST 224
Query: 153 DANFLKV 159
A+F++V
Sbjct: 225 TASFIRV 231
Score = 214 (80.4 bits), Expect = 3.6e-42, Sum P(2) = 3.6e-42
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 506
V KY+GE R++R++F AR++ P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ
Sbjct: 237 VQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQ 296
Query: 507 MDGFD 511
MDGF+
Sbjct: 297 MDGFE 301
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 280 (103.6 bits), Expect = 9.2e-42, Sum P(2) = 9.2e-42
Identities = 57/127 (44%), Positives = 82/127 (64%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
+T G Y V LD+ LK G VAL + ++ LP E D + + ++ DI+Y
Sbjct: 101 STTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISY 160
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
IGGL Q +E+RE +ELPL + EL+Q++GI PP+G L+YGPPG GKT+LA+AVA+
Sbjct: 161 GDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTA 220
Query: 154 ANFLKVV 160
A+F++VV
Sbjct: 221 ASFIRVV 227
Score = 214 (80.4 bits), Expect = 9.2e-42, Sum P(2) = 9.2e-42
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 506
V KY+GE R++R++F A+++ P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ
Sbjct: 232 VQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQ 291
Query: 507 MDGFD 511
MDGFD
Sbjct: 292 MDGFD 296
>MGI|MGI:95909 [details] [associations]
symbol:Slc39a7 "solute carrier family 39 (zinc transporter),
member 7" species:10090 "Mus musculus" [GO:0005515 "protein
binding" evidence=IPI] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0006829 "zinc ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030001 "metal
ion transport" evidence=IEA] [GO:0046873 "metal ion transmembrane
transporter activity" evidence=IEA] [GO:0055085 "transmembrane
transport" evidence=IEA] InterPro:IPR003689 Pfam:PF02535
MGI:MGI:95909 GO:GO:0016021 GO:GO:0046873 GO:GO:0006829
EMBL:AF100956 eggNOG:COG0428 GeneTree:ENSGT00700000104299 KO:K14713
OMA:HRGHGHD HOGENOM:HOG000185308 CTD:7922 HOVERGEN:HBG001037
ChiTaRS:SLC39A7 EMBL:M32010 EMBL:AK159968 IPI:IPI00118834
PIR:I49714 RefSeq:NP_001071177.1 RefSeq:NP_032228.2
UniGene:Mm.18556 ProteinModelPortal:Q31125 IntAct:Q31125
STRING:Q31125 PhosphoSite:Q31125 PaxDb:Q31125 PRIDE:Q31125
Ensembl:ENSMUST00000025186 Ensembl:ENSMUST00000169397 GeneID:14977
KEGG:mmu:14977 UCSC:uc008cav.1 InParanoid:Q31125 OrthoDB:EOG46DM3M
NextBio:287346 Bgee:Q31125 Genevestigator:Q31125
GermOnline:ENSMUSG00000024327 Uniprot:Q31125
Length = 476
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 104/260 (40%), Positives = 145/260 (55%)
Query: 206 SKQANEPYHQDVKHPI-TLQVWGEALLSTILISLAPFLILFVVPLDT-ATGNENFLKVXX 263
S++A P +KH + T+ +W AL +T+LIS APF +LF++P+++ + + + L++
Sbjct: 125 SREAGAP---GIKHHLDTVTLWAYALGATVLISAAPFFVLFLIPVESNSPRHRSLLQILL 181
Query: 264 XXXXXXXXXDAFLHLIPHAIGAXXXXXXXXXXXXXXXXXXXIADLSVGLWVLFGILAFLC 323
DAFLHLIPHA+ LSVGLWVL GI+AFL
Sbjct: 182 SFASGGLLGDAFLHLIPHALEPHSHHAPEQPGHGHSHSGQGPI-LSVGLWVLSGIVAFLV 240
Query: 324 VEKFVRYVKGGHGHSHG---KPIEKKKHTXXXXXXXXX----XXXXXXXXXXYKKTKR-- 374
VEKFVR+VKGGHGHSHG + HT +K +
Sbjct: 241 VEKFVRHVKGGHGHSHGHGDRHAHGDSHTHGDRHECSSKEKPSTEEEKEVGGLRKRRGGN 300
Query: 375 -------VKAKTSSQ--SNDDIAVAGYLNLAADFTHNFTDGLAIGASYLAGKHVGIVTTI 425
VK ++ + + D+ V+GYLNLAAD HNFTDGLAIGAS+ G+ +GI+TT+
Sbjct: 301 TGPRDGPVKPQSPEEEKAGSDLRVSGYLNLAADLAHNFTDGLAIGASFRGGRGLGILTTM 360
Query: 426 TILFHEIPHEIGDFAILIHA 445
T+L HE+PHE+GDFAIL+ +
Sbjct: 361 TVLLHEVPHEVGDFAILVQS 380
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 276 (102.2 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 59/127 (46%), Positives = 80/127 (62%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
T+ G + V +DK L+ G V L+ ++ L + DPLV M E TY
Sbjct: 125 TSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETY 184
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ IGGL QI+E++E +ELPL +PE ++ +GI PPKG +LYG PGTGKTLLA+AVA+Q
Sbjct: 185 ADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTS 244
Query: 154 ANFLKVV 160
A FL+VV
Sbjct: 245 ATFLRVV 251
Score = 222 (83.2 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 37/69 (53%), Positives = 54/69 (78%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ KY+G+ +L+RE+F A +H P I+F+DEIDAIG +R+ + +REIQRT++ELLN
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 506 QMDGFDSLG 514
Q+DGFDS G
Sbjct: 315 QLDGFDSRG 323
Score = 40 (19.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 333 GGHGHSHGKPIEKKK 347
GGHG GK +K K
Sbjct: 7 GGHGPGGGKKDDKDK 21
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 276 (102.2 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 59/127 (46%), Positives = 80/127 (62%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
T+ G + V +DK L+ G V L+ ++ L + DPLV M E TY
Sbjct: 125 TSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETY 184
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ IGGL QI+E++E +ELPL +PE ++ +GI PPKG +LYG PGTGKTLLA+AVA+Q
Sbjct: 185 ADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTS 244
Query: 154 ANFLKVV 160
A FL+VV
Sbjct: 245 ATFLRVV 251
Score = 222 (83.2 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 37/69 (53%), Positives = 54/69 (78%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ KY+G+ +L+RE+F A +H P I+F+DEIDAIG +R+ + +REIQRT++ELLN
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 506 QMDGFDSLG 514
Q+DGFDS G
Sbjct: 315 QLDGFDSRG 323
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 275 (101.9 bits), Expect = 1.8e-41, Sum P(2) = 1.8e-41
Identities = 52/126 (41%), Positives = 81/126 (64%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
+T G YVV LD+ LK+ + VAL + ++ LP E D + + + D+TY
Sbjct: 95 STTGSNYVVRILSTLDRELLKASSSVALHRHSNALVDILPPEADSSISIVGEDQKPDVTY 154
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ +GGL Q +E++E +ELPL +L+ ++GI PP+G LLYGPPGTGKT+L +AVA+
Sbjct: 155 ADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTT 214
Query: 154 ANFLKV 159
A+F+++
Sbjct: 215 ASFIRI 220
Score = 218 (81.8 bits), Expect = 1.8e-41, Sum P(2) = 1.8e-41
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 506
V KY+GE R++R++F AR++ P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ
Sbjct: 226 VQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQ 285
Query: 507 MDGFD 511
MDGFD
Sbjct: 286 MDGFD 290
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 275 (101.9 bits), Expect = 1.8e-41, Sum P(2) = 1.8e-41
Identities = 52/126 (41%), Positives = 81/126 (64%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
+T G YVV LD+ LK+ + VAL + ++ LP E D + + + D+TY
Sbjct: 95 STTGSNYVVRILSTLDRELLKASSSVALHRHSNALVDILPPEADSSISIVGEDQKPDVTY 154
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ +GGL Q +E++E +ELPL +L+ ++GI PP+G LLYGPPGTGKT+L +AVA+
Sbjct: 155 ADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTT 214
Query: 154 ANFLKV 159
A+F+++
Sbjct: 215 ASFIRI 220
Score = 218 (81.8 bits), Expect = 1.8e-41, Sum P(2) = 1.8e-41
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 506
V KY+GE R++R++F AR++ P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ
Sbjct: 226 VQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQ 285
Query: 507 MDGFD 511
MDGFD
Sbjct: 286 MDGFD 290
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 288 (106.4 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 59/123 (47%), Positives = 81/123 (65%)
Query: 38 PRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIG 97
P Y V +DK L+ G V L T++I+ L + DP+V M + +YS IG
Sbjct: 126 PDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPTESYSDIG 185
Query: 98 GLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFL 157
GL QI+E++E +ELPL +PEL++ +GI PPKG +LYG PGTGKTLLA+AVA+Q A FL
Sbjct: 186 GLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFL 245
Query: 158 KVV 160
++V
Sbjct: 246 RIV 248
Score = 204 (76.9 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 35/69 (50%), Positives = 52/69 (75%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ KY+G+ RL R++F A ++ P I+F+DEIDAIG +R+ + +REIQRT++ELLN
Sbjct: 252 LIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 311
Query: 506 QMDGFDSLG 514
Q+DGFD G
Sbjct: 312 QLDGFDDRG 320
>WB|WBGene00006494 [details] [associations]
symbol:hke-4.2 species:6239 "Caenorhabditis elegans"
[GO:0016020 "membrane" evidence=IEA] [GO:0030001 "metal ion
transport" evidence=IEA] [GO:0046873 "metal ion transmembrane
transporter activity" evidence=IEA] [GO:0055085 "transmembrane
transport" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR003689 Pfam:PF02535 GO:GO:0016021
GO:GO:0046873 eggNOG:COG0428 GeneTree:ENSGT00700000104299 KO:K14713
OMA:HRGHGHD EMBL:Z99942 PIR:T23089 RefSeq:NP_510563.2
ProteinModelPortal:Q9XTQ7 DIP:DIP-24382N IntAct:Q9XTQ7
MINT:MINT-1129486 STRING:Q9XTQ7 PaxDb:Q9XTQ7
EnsemblMetazoa:H13N06.5 GeneID:181640 KEGG:cel:CELE_H13N06.5
CTD:181640 WormBase:H13N06.5 InParanoid:Q9XTQ7 NextBio:914776
Uniprot:Q9XTQ7
Length = 462
Score = 415 (151.1 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 113/264 (42%), Positives = 137/264 (51%)
Query: 224 QVWGEALLSTILISLAPFLILFVVPLDTATGNEN-FLKVXXXXXXXXXXXDAFLHLIPHA 282
++W A+ +T+LIS AP IL +P+ T LKV DAFLHLIPHA
Sbjct: 156 RLWVYAISATLLISAAPCFILMFIPIQANTSESGPLLKVLLAFGSGGLLGDAFLHLIPHA 215
Query: 283 IGAXXXXXXXXXXXXXXXX---XXXIADLSVGLWVLFGILAFLCVEKFVRYVKG--GHGH 337
A D+SVG WVL GI+AFL VEK VR ++G GHGH
Sbjct: 216 TPAGDGHGHSHSHGHSHGGGGHSHGAHDMSVGGWVLGGIIAFLTVEKLVRILRGEDGHGH 275
Query: 338 SHGKPIE-KKKHTXXXXXXXXXXXXXXXXXXXYKKTKRVKAKTSSQSNDDIAVAGYLNLA 396
SHG +KK T KK + K + QS I V YLNLA
Sbjct: 276 SHGHSHGGEKKETKEKDSKDKVA----------KKEE--KPEKDEQS---IKVTAYLNLA 320
Query: 397 ADFTHNFTDGLAIGASYLAGKHVGIVTTITILFHEIPHEIGDFAILIHAIVDKYIGESAR 456
ADFTHNFTDGLAIGAS++AG VGIVT IT+L HE+PHEIGDFAILI + Y + A
Sbjct: 321 ADFTHNFTDGLAIGASFIAGTTVGIVTMITVLVHEVPHEIGDFAILIQS---GYSKKKAM 377
Query: 457 LIREMFNYARDHQPCIIFMDEIDA 480
LI ++ C+I + DA
Sbjct: 378 LI-QLVTALGALSGCVISLFSADA 400
Score = 40 (19.1 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 204 KYSKQANEPYH--QDVKH 219
KY+K+ N+P + Q+V H
Sbjct: 23 KYTKEMNDPEYVQQNVHH 40
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 282 (104.3 bits), Expect = 2.6e-41, Sum P(2) = 2.6e-41
Identities = 62/155 (40%), Positives = 92/155 (59%)
Query: 6 VDEVRHKTLQDYRKKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTT 65
VDE+R + L E + + + T G + V +DK +L+ G V L+
Sbjct: 102 VDELRGTPMAV--GSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKN 159
Query: 66 LTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGI 125
++ L + DP+V M E TY+ +GGL +QI+E++E +ELPL +PE ++ +GI
Sbjct: 160 HAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGI 219
Query: 126 TPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 160
PPKG +LYG PGTGKTLLA+AVA+Q A FL++V
Sbjct: 220 RPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIV 254
Score = 212 (79.7 bits), Expect = 2.6e-41, Sum P(2) = 2.6e-41
Identities = 34/69 (49%), Positives = 54/69 (78%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ KY+G+ +++RE+F A ++ P I+F+DEIDA+G +R+ + +REIQRT++ELLN
Sbjct: 258 LIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLN 317
Query: 506 QMDGFDSLG 514
Q+DGFDS G
Sbjct: 318 QLDGFDSRG 326
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 282 (104.3 bits), Expect = 3.0e-41, Sum P(2) = 3.0e-41
Identities = 59/140 (42%), Positives = 86/140 (61%)
Query: 21 LTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLV 80
L E + + + +T Y V +DK L+ G V L T+ ++ L + DP+V
Sbjct: 113 LEEIIDDDHAIVSSTASSEYYVSIMSFVDKGLLEPGCSVLLHHKTVAVVGVLQDDADPMV 172
Query: 81 YNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTG 140
M + +Y+ IGGL QI+E++E +ELPL +PEL++ +GI PPKG +LYG PGTG
Sbjct: 173 SVMKLDKSPTESYADIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTG 232
Query: 141 KTLLARAVASQLDANFLKVV 160
KTLLA+AVA+Q A FL++V
Sbjct: 233 KTLLAKAVANQTSATFLRIV 252
Score = 214 (80.4 bits), Expect = 3.0e-41, Sum P(2) = 3.0e-41
Identities = 37/69 (53%), Positives = 52/69 (75%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ KY+G+ RL R++F A DH P I+F+DEIDAIG +R+ + +REIQRT++ELLN
Sbjct: 256 LIQKYLGDGPRLCRQIFQIAADHAPSIVFIDEIDAIGTKRYESTSGGEREIQRTMLELLN 315
Query: 506 QMDGFDSLG 514
Q+DGFD G
Sbjct: 316 QLDGFDDRG 324
>UNIPROTKB|G1K274 [details] [associations]
symbol:SLC39A7 "Zinc transporter SLC39A7" species:9615
"Canis lupus familiaris" [GO:0046873 "metal ion transmembrane
transporter activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR003689 Pfam:PF02535 GO:GO:0016020
GO:GO:0046873 GeneTree:ENSGT00700000104299 OMA:HRGHGHD
EMBL:AAEX03008237 Ensembl:ENSCAFT00000001426 Uniprot:G1K274
Length = 523
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 99/244 (40%), Positives = 136/244 (55%)
Query: 222 TLQVWGEALLSTILISLAPFLILFVVPLDT-ATGNENFLKVXXXXXXXXXXXDAFLHLIP 280
T+ +W AL +T+LIS APF +LF++P+++ + + + L++ DAFLHLIP
Sbjct: 185 TVTLWAYALGATVLISAAPFFVLFLIPVESNSPRHRSLLQILLSFASGGLLGDAFLHLIP 244
Query: 281 HAIGAXXXXXXXXXXXXXXXXXXXIADLSVGLWVLFGILAFLCVEKFVRYVKGGHGHSHG 340
HA+ LSVGLWVL GI+AFL VEKFVR+VKGGHGHSHG
Sbjct: 245 HALEPHSHHPLEQPGHGHSHSGQGPI-LSVGLWVLSGIVAFLVVEKFVRHVKGGHGHSHG 303
Query: 341 -----------------KPIEKKKHTXXXXXXXXXXXXXXXXXXXYKKTKRVKAKTSSQ- 382
K K+K + K ++ + S +
Sbjct: 304 HGHTHGHTQGSHGHGTQKYPSKEKQSSEEEEKEANGSRKRKGGSTRLKDGPLRPQNSEEE 363
Query: 383 -SNDDIAVAGYLNLAADFTHNFTDGLAIGASYLAGKHVGIVTTITILFHEIPHEIGDFAI 441
+ D+ V+GYLNLAAD HNFTDGLAIGAS+ G+ +GI+TT+T+L HE+PHE+GDFAI
Sbjct: 364 KTGSDLRVSGYLNLAADLAHNFTDGLAIGASFRGGRGLGILTTMTVLLHEVPHEVGDFAI 423
Query: 442 LIHA 445
L+ +
Sbjct: 424 LVQS 427
>UNIPROTKB|Q5TJF6 [details] [associations]
symbol:SLC39A7 "Zinc transporter SLC39A7" species:9615
"Canis lupus familiaris" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0006829 "zinc ion transport" evidence=IEA]
[GO:0046873 "metal ion transmembrane transporter activity"
evidence=IEA] InterPro:IPR003689 Pfam:PF02535 GO:GO:0016021
GO:GO:0046873 GO:GO:0006829 EMBL:AJ630366 eggNOG:COG0428 KO:K14713
HOGENOM:HOG000185308 RefSeq:NP_001041565.1 UniGene:Cfa.18787
GeneID:481736 KEGG:cfa:481736 CTD:7922 HOVERGEN:HBG001037
InParanoid:Q5TJF6 NextBio:20856478 Uniprot:Q5TJF6
Length = 469
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 99/244 (40%), Positives = 136/244 (55%)
Query: 222 TLQVWGEALLSTILISLAPFLILFVVPLDT-ATGNENFLKVXXXXXXXXXXXDAFLHLIP 280
T+ +W AL +T+LIS APF +LF++P+++ + + + L++ DAFLHLIP
Sbjct: 131 TVTLWAYALGATVLISAAPFFVLFLIPVESNSPRHRSLLQILLSFASGGLLGDAFLHLIP 190
Query: 281 HAIGAXXXXXXXXXXXXXXXXXXXIADLSVGLWVLFGILAFLCVEKFVRYVKGGHGHSHG 340
HA+ LSVGLWVL GI+AFL VEKFVR+VKGGHGHSHG
Sbjct: 191 HALEPHSHHPLEQPGHGHSHSGQGPI-LSVGLWVLSGIVAFLVVEKFVRHVKGGHGHSHG 249
Query: 341 -----------------KPIEKKKHTXXXXXXXXXXXXXXXXXXXYKKTKRVKAKTSSQ- 382
K K+K + K ++ + S +
Sbjct: 250 HGHTHGHTQGSHGHGTQKYPSKEKQSSEEEEKEANGSRKRKGGSTRLKDGPLRPQNSEEE 309
Query: 383 -SNDDIAVAGYLNLAADFTHNFTDGLAIGASYLAGKHVGIVTTITILFHEIPHEIGDFAI 441
+ D+ V+GYLNLAAD HNFTDGLAIGAS+ G+ +GI+TT+T+L HE+PHE+GDFAI
Sbjct: 310 KTGSDLRVSGYLNLAADLAHNFTDGLAIGASFRGGRGLGILTTMTVLLHEVPHEVGDFAI 369
Query: 442 LIHA 445
L+ +
Sbjct: 370 LVQS 373
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 272 (100.8 bits), Expect = 7.5e-41, Sum P(2) = 7.5e-41
Identities = 53/127 (41%), Positives = 83/127 (65%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
+T G Y V +D+ +LK + V L + ++ +P E D + +S ++ DI+Y
Sbjct: 92 STTGSNYYVRVLSTIDREQLKPSSSVGLHKQSNCLVDLVPPEADSTISMLSPDEKPDISY 151
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
S IGGL Q +E+RE +ELPL + +L++++GI PP+G LL+GPPG GKT+LA+AVA
Sbjct: 152 SDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTT 211
Query: 154 ANFLKVV 160
A+F++VV
Sbjct: 212 ASFIRVV 218
Score = 215 (80.7 bits), Expect = 7.5e-41, Sum P(2) = 7.5e-41
Identities = 41/79 (51%), Positives = 55/79 (69%)
Query: 434 HEIGDFAILIHA-IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 492
H F ++ + V KY+GE R++R++F A+ + P IIF+DEIDAI +RF T A
Sbjct: 209 HTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRFDAQTGA 268
Query: 493 DREIQRTLMELLNQMDGFD 511
DRE+QR L+ELLNQMDGFD
Sbjct: 269 DREVQRILLELLNQMDGFD 287
>UNIPROTKB|Q0P5C9 [details] [associations]
symbol:SLC39A7 "Solute carrier family 39 (Zinc
transporter), member 7" species:9913 "Bos taurus" [GO:0046873
"metal ion transmembrane transporter activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR003689
Pfam:PF02535 GO:GO:0016020 GO:GO:0046873 eggNOG:COG0428
GeneTree:ENSGT00700000104299 KO:K14713 OMA:HRGHGHD
HOGENOM:HOG000185308 CTD:7922 HOVERGEN:HBG001037 EMBL:DAAA02054891
EMBL:DAAA02054892 EMBL:BC120222 EMBL:BT030517 IPI:IPI00905902
RefSeq:NP_001069705.2 UniGene:Bt.8102 Ensembl:ENSBTAT00000010771
Ensembl:ENSBTAT00000052666 GeneID:540716 KEGG:bta:540716
NextBio:20878790 Uniprot:Q0P5C9
Length = 469
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 100/250 (40%), Positives = 139/250 (55%)
Query: 217 VKHPI-TLQVWGEALLSTILISLAPFLILFVVPLDT-ATGNENFLKVXXXXXXXXXXXDA 274
VK + T+ +W AL +T+LIS APF +LF++P+++ + + + L++ DA
Sbjct: 125 VKQDLDTVTLWAYALGATVLISAAPFFVLFLIPVESNSPRHRSLLQILLSFASGGLLGDA 184
Query: 275 FLHLIPHAIGAXXXXXXXXXXXXXXXXXXXIADLSVGLWVLFGILAFLCVEKFVRYVKGG 334
FLHLIPHA+ LSVGLWVL GI+AFL VEKFVR+VKGG
Sbjct: 185 FLHLIPHALEPHSHHPPEQPGHGHSHSGQGPI-LSVGLWVLSGIVAFLVVEKFVRHVKGG 243
Query: 335 HGHSHG-----------------KPIEKKKHTXXXXXXXXXXXXXXXXXXXYKKTKRVKA 377
HGHSHG + K+K + K V+
Sbjct: 244 HGHSHGHGHAHGHTHGSHEHGRQERSSKEKQSSEEEEKEAGALRKRRGGSTRPKDGPVRP 303
Query: 378 KTSSQ--SNDDIAVAGYLNLAADFTHNFTDGLAIGASYLAGKHVGIVTTITILFHEIPHE 435
+ + + + D+ V+GYLNLAAD HNFTDGLAIGAS+ G+ +GI+TT+T+L HE+PHE
Sbjct: 304 QNAEEEKAGSDLRVSGYLNLAADLAHNFTDGLAIGASFRGGRGLGILTTMTVLLHEVPHE 363
Query: 436 IGDFAILIHA 445
+GDFAIL+ +
Sbjct: 364 VGDFAILVQS 373
>UNIPROTKB|F5H0B5 [details] [associations]
symbol:SLC39A7 "Zinc transporter SLC39A7" species:9606
"Homo sapiens" [GO:0016020 "membrane" evidence=IEA] [GO:0046873
"metal ion transmembrane transporter activity" evidence=IEA]
InterPro:IPR003689 Pfam:PF02535 GO:GO:0016020 GO:GO:0046873
EMBL:AL662824 EMBL:AL844527 EMBL:CR759733 EMBL:CR936877
EMBL:CR759786 EMBL:CR847841 EMBL:CR354565 HGNC:HGNC:4927
ChiTaRS:SLC39A7 IPI:IPI01014684 Ensembl:ENST00000547621
Ensembl:ENST00000548370 Ensembl:ENST00000549054
Ensembl:ENST00000550126 Ensembl:ENST00000551069 Uniprot:F5H0B5
Length = 450
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 105/262 (40%), Positives = 141/262 (53%)
Query: 205 YSKQANEPYHQDVKHPITLQVWGEALLSTILISLAPFLILFVVPLDT-ATGNENFLKVXX 263
Y + QD+ +TL W AL +T+LIS APF +LF++P+++ + + + L++
Sbjct: 98 YGESGAPGIKQDLD-AVTL--WAYALGATVLISAAPFFVLFLIPVESNSPRHRSLLQILL 154
Query: 264 XXXXXXXXXDAFLHLIPHAIGAXXXXXXXXXXXXXXXXXXXIADLSVGLWVLFGILAFLC 323
DAFLHLIPHA+ LSVGLWVL GI+AFL
Sbjct: 155 SFASGGLLGDAFLHLIPHALEPHSHHTLEQPGHGHSHSGQGPI-LSVGLWVLSGIVAFLV 213
Query: 324 VEKFVRYVKGGHGHSHGKPIEKKKHTXXXXXXXXXXXXXXXXXXXY---KKTKRVKAKT- 379
VEKFVR+VKGGHGHSHG HT K+T+ V+ +
Sbjct: 214 VEKFVRHVKGGHGHSHGHG-HAHSHTRGSHGHGRQERSTKEKQSSEEEEKETRGVQKRRG 272
Query: 380 -SSQSND---------------DIAVAGYLNLAADFTHNFTDGLAIGASYLAGKHVGIVT 423
S+ D D+ V+GYLNLAAD HNFTDGLAIGAS+ G+ +GI+T
Sbjct: 273 GSTVPKDGPVRPQNAEEEKRGLDLRVSGYLNLAADLAHNFTDGLAIGASFRGGRGLGILT 332
Query: 424 TITILFHEIPHEIGDFAILIHA 445
T+T+L HE+PHE+GDFAIL+ +
Sbjct: 333 TMTVLLHEVPHEVGDFAILVQS 354
>UNIPROTKB|Q92504 [details] [associations]
symbol:SLC39A7 "Zinc transporter SLC39A7" species:9606
"Homo sapiens" [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] [GO:0006829 "zinc ion transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=TAS] [GO:0005789 "endoplasmic
reticulum membrane" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_15518 InterPro:IPR003689
Pfam:PF02535 GO:GO:0016021 EMBL:CH471081 GO:GO:0005789
GO:GO:0055085 GO:GO:0046873 GO:GO:0006829 EMBL:AL031228
EMBL:AL645940 EMBL:AL662824 EMBL:AL844527 EMBL:CR759733
EMBL:CR936877 eggNOG:COG0428 KO:K14713 OMA:HRGHGHD EMBL:CR759786
HOGENOM:HOG000185308 EMBL:CR354565 CTD:7922 HOVERGEN:HBG001037
EMBL:D82060 EMBL:AF117221 EMBL:BC000645 IPI:IPI00021888
RefSeq:NP_001070984.1 RefSeq:NP_008910.2 UniGene:Hs.631995
ProteinModelPortal:Q92504 IntAct:Q92504 STRING:Q92504
TCDB:2.A.5.4.3 PhosphoSite:Q92504 DMDM:12643344 PaxDb:Q92504
PRIDE:Q92504 DNASU:7922 Ensembl:ENST00000374675
Ensembl:ENST00000374677 Ensembl:ENST00000383213
Ensembl:ENST00000383214 Ensembl:ENST00000416369
Ensembl:ENST00000418477 Ensembl:ENST00000423043
Ensembl:ENST00000431735 Ensembl:ENST00000441854
Ensembl:ENST00000441953 Ensembl:ENST00000443773
Ensembl:ENST00000456261 GeneID:7922 KEGG:hsa:7922 UCSC:uc003odf.3
GeneCards:GC06P033168 HGNC:HGNC:4927 HPA:HPA053999 MIM:601416
neXtProt:NX_Q92504 PharmGKB:PA29305 InParanoid:Q92504
PhylomeDB:Q92504 ChiTaRS:SLC39A7 GenomeRNAi:7922 NextBio:30416
ArrayExpress:Q92504 Bgee:Q92504 CleanEx:HS_SLC39A7
Genevestigator:Q92504 GermOnline:ENSG00000112473 Uniprot:Q92504
Length = 469
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 105/262 (40%), Positives = 141/262 (53%)
Query: 205 YSKQANEPYHQDVKHPITLQVWGEALLSTILISLAPFLILFVVPLDT-ATGNENFLKVXX 263
Y + QD+ +TL W AL +T+LIS APF +LF++P+++ + + + L++
Sbjct: 117 YGESGAPGIKQDLD-AVTL--WAYALGATVLISAAPFFVLFLIPVESNSPRHRSLLQILL 173
Query: 264 XXXXXXXXXDAFLHLIPHAIGAXXXXXXXXXXXXXXXXXXXIADLSVGLWVLFGILAFLC 323
DAFLHLIPHA+ LSVGLWVL GI+AFL
Sbjct: 174 SFASGGLLGDAFLHLIPHALEPHSHHTLEQPGHGHSHSGQGPI-LSVGLWVLSGIVAFLV 232
Query: 324 VEKFVRYVKGGHGHSHGKPIEKKKHTXXXXXXXXXXXXXXXXXXXY---KKTKRVKAKT- 379
VEKFVR+VKGGHGHSHG HT K+T+ V+ +
Sbjct: 233 VEKFVRHVKGGHGHSHGHG-HAHSHTRGSHGHGRQERSTKEKQSSEEEEKETRGVQKRRG 291
Query: 380 -SSQSND---------------DIAVAGYLNLAADFTHNFTDGLAIGASYLAGKHVGIVT 423
S+ D D+ V+GYLNLAAD HNFTDGLAIGAS+ G+ +GI+T
Sbjct: 292 GSTVPKDGPVRPQNAEEEKRGLDLRVSGYLNLAADLAHNFTDGLAIGASFRGGRGLGILT 351
Query: 424 TITILFHEIPHEIGDFAILIHA 445
T+T+L HE+PHE+GDFAIL+ +
Sbjct: 352 TMTVLLHEVPHEVGDFAILVQS 373
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 270 (100.1 bits), Expect = 2.9e-40, Sum P(2) = 2.9e-40
Identities = 54/127 (42%), Positives = 81/127 (63%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
+T G Y V +++ LK VAL + ++ LP E D + +S + D++Y
Sbjct: 95 STTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSY 154
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ IGG Q +E+RE +ELPL + EL++++GI PP+G LLYGPPGTGKT+LA+AVA+
Sbjct: 155 NDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTT 214
Query: 154 ANFLKVV 160
A F++VV
Sbjct: 215 AAFIRVV 221
Score = 213 (80.0 bits), Expect = 2.9e-40, Sum P(2) = 2.9e-40
Identities = 39/65 (60%), Positives = 50/65 (76%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 506
V KY+GE R++R++F A+++ P IIF+DE+DAI RF T ADRE+QR LMELLNQ
Sbjct: 226 VQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQ 285
Query: 507 MDGFD 511
MDGFD
Sbjct: 286 MDGFD 290
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 267 (99.0 bits), Expect = 4.7e-40, Sum P(2) = 4.7e-40
Identities = 52/127 (40%), Positives = 81/127 (63%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
+T G Y V +D+ LK VAL + ++ LP E D + + ++ D++Y
Sbjct: 100 STTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQPDEKPDVSY 159
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ IGG+ Q +E+RE +ELPL + EL++++GI PP+G L+YGPPG GKT+LA+AVA
Sbjct: 160 ADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 219
Query: 154 ANFLKVV 160
A+F++VV
Sbjct: 220 ASFIRVV 226
Score = 216 (81.1 bits), Expect = 4.7e-40, Sum P(2) = 4.7e-40
Identities = 41/79 (51%), Positives = 56/79 (70%)
Query: 434 HEIGDFAILIHA-IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 492
H F ++ + V KY+GE R++R++F A+++ P IIF+DEIDAI +RF T A
Sbjct: 217 HTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 276
Query: 493 DREIQRTLMELLNQMDGFD 511
DRE+QR L+ELLNQMDGFD
Sbjct: 277 DREVQRILLELLNQMDGFD 295
>UNIPROTKB|F1RZW9 [details] [associations]
symbol:SLC39A7 "Zinc transporter SLC39A7" species:9823 "Sus
scrofa" [GO:0046873 "metal ion transmembrane transporter activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR003689 Pfam:PF02535 GO:GO:0016020 GO:GO:0046873
GeneTree:ENSGT00700000104299 OMA:HRGHGHD EMBL:CT737383
Ensembl:ENSSSCT00000036035 Ensembl:ENSSSCT00000036497
Uniprot:F1RZW9
Length = 469
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 99/245 (40%), Positives = 135/245 (55%)
Query: 222 TLQVWGEALLSTILISLAPFLILFVVPLDT-ATGNENFLKVXXXXXXXXXXXDAFLHLIP 280
T+ +W AL +T+LIS APF +LF++P+++ + + + L++ DAFLHLIP
Sbjct: 131 TVTLWAYALGATVLISAAPFFVLFLIPVESNSPRHRSLLQILLSFASGGLLGDAFLHLIP 190
Query: 281 HAIGAXXXXXXXXXXXXXXXXXXXIADLSVGLWVLFGILAFLCVEKFVRYVKGGHGHSHG 340
HA+ LSVGLWVL GI+AFL VEKFVR+VKGGH HSHG
Sbjct: 191 HALEPHSHHPLEQPGHGHSHSGQGPI-LSVGLWVLSGIVAFLVVEKFVRHVKGGHEHSHG 249
Query: 341 K------------------PIEKKKHTXXXXXXXXXXXXXXXXXXXYKKTKRVKAKTSSQ 382
P K+K + K V+ + S +
Sbjct: 250 HGHAHGHTHGGHGHGRQECP-SKEKQSSEEEEKEAGASRKRRGGSTRPKDGPVRPQHSGE 308
Query: 383 --SNDDIAVAGYLNLAADFTHNFTDGLAIGASYLAGKHVGIVTTITILFHEIPHEIGDFA 440
+ D+ V+GYLNLAAD HNFTDGLAIGAS+ G+ +GI+TT+T+L HE+PHE+GDFA
Sbjct: 309 EKAGSDLRVSGYLNLAADLAHNFTDGLAIGASFRGGRGLGILTTMTVLLHEVPHEVGDFA 368
Query: 441 ILIHA 445
IL+ +
Sbjct: 369 ILVQS 373
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 264 (98.0 bits), Expect = 2.4e-39, Sum P(2) = 2.4e-39
Identities = 53/127 (41%), Positives = 79/127 (62%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
+T G Y V +D+ LK VAL + ++ LP E D + ++ + D+ Y
Sbjct: 105 STTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVLY 164
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
S IGG+ Q +E+RE +ELPL + EL++++GI PP+G L+YGPPG GKT+LA+AVA
Sbjct: 165 SDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 224
Query: 154 ANFLKVV 160
A F++VV
Sbjct: 225 AAFIRVV 231
Score = 214 (80.4 bits), Expect = 2.4e-39, Sum P(2) = 2.4e-39
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 506
V KY+GE R++R++F A+++ P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ
Sbjct: 236 VQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQ 295
Query: 507 MDGFD 511
MDGFD
Sbjct: 296 MDGFD 300
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 259 (96.2 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 52/127 (40%), Positives = 78/127 (61%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
+T G Y V L+K LK VAL + +I+ LP E D + + + ++ Y
Sbjct: 78 STAGSNYYVRILSTLNKEDLKPSVSVALHRHSHSIVNILPSESDSSIQLLQITERPNVKY 137
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ +GGL Q +E++E +ELPL PEL++++GI PP G L+YGPPGTGKT+L +AVA++
Sbjct: 138 TDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQ 197
Query: 154 ANFLKVV 160
F+ VV
Sbjct: 198 VTFIGVV 204
Score = 216 (81.1 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 506
V KY+GE R++R++F AR++ P IIF+DE+DAI +RF T ADRE+QR L+ELLNQ
Sbjct: 209 VQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQTGADREVQRILLELLNQ 268
Query: 507 MDGFD 511
MDGFD
Sbjct: 269 MDGFD 273
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 259 (96.2 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 52/127 (40%), Positives = 78/127 (61%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
+T G Y V L+K LK VAL + +I+ LP E D + + + ++ Y
Sbjct: 78 STAGSNYYVRILSTLNKEDLKPSVSVALHRHSHSIVNILPSESDSSIQLLQITERPNVKY 137
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ +GGL Q +E++E +ELPL PEL++++GI PP G L+YGPPGTGKT+L +AVA++
Sbjct: 138 TDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQ 197
Query: 154 ANFLKVV 160
F+ VV
Sbjct: 198 VTFIGVV 204
Score = 216 (81.1 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 506
V KY+GE R++R++F AR++ P IIF+DE+DAI +RF T ADRE+QR L+ELLNQ
Sbjct: 209 VQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQTGADREVQRILLELLNQ 268
Query: 507 MDGFD 511
MDGFD
Sbjct: 269 MDGFD 273
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 274 (101.5 bits), Expect = 3.1e-39, Sum P(2) = 3.1e-39
Identities = 54/126 (42%), Positives = 80/126 (63%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
+T G YVV LD+ LK VAL + ++ LP + D + M + D+TY
Sbjct: 112 STTGMSYVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPDVTY 171
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ +GGL Q +E+RE +ELPL+ +L++++GI PP+G LLYGPPGTGKT+L +AVA+
Sbjct: 172 ADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTK 231
Query: 154 ANFLKV 159
A F++V
Sbjct: 232 AAFIRV 237
Score = 201 (75.8 bits), Expect = 3.1e-39, Sum P(2) = 3.1e-39
Identities = 36/65 (55%), Positives = 50/65 (76%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 506
V KY+GE R++R++F AR++ P IIF+DE+D+I +RF T +DRE+QR L+ELL Q
Sbjct: 243 VHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQ 302
Query: 507 MDGFD 511
MDGFD
Sbjct: 303 MDGFD 307
>RGD|1593280 [details] [associations]
symbol:Slc39a7 "solute carrier family 39 (zinc transporter),
member 7" species:10116 "Rattus norvegicus" [GO:0016020 "membrane"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR003689 Pfam:PF02535 RGD:1593280
GO:GO:0016020 GO:GO:0046873 EMBL:BX883042 EMBL:CH473988
eggNOG:COG0428 GeneTree:ENSGT00700000104299 KO:K14713 OMA:HRGHGHD
HOGENOM:HOG000185308 CTD:7922 HOVERGEN:HBG001037 OrthoDB:EOG46DM3M
EMBL:BC079141 IPI:IPI00215473 RefSeq:NP_001008885.1
RefSeq:NP_001158216.1 UniGene:Rn.103977 STRING:Q6MGB4
Ensembl:ENSRNOT00000000541 GeneID:294281 KEGG:rno:294281
UCSC:RGD:1593280 InParanoid:Q6MGB4 NextBio:637882
Genevestigator:Q6MGB4 Uniprot:Q6MGB4
Length = 468
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 102/266 (38%), Positives = 141/266 (53%)
Query: 206 SKQANEPYHQDVKHPI-TLQVWGEALLSTILISLAPFLILFVVPLDT-ATGNENFLKVXX 263
S++A P +KH + T+ +W AL +T+LIS APF +LF++P+++ + + + L++
Sbjct: 111 SREAGAP---GIKHHLDTVTLWAYALGATVLISAAPFFVLFLIPVESNSPRHRSLLQILL 167
Query: 264 XXXXXXXXXDAFLHLIPHAIGAXXXXXXXXXXXXXXXXXXXIADLSVGLWVLFGILAFLC 323
DAFLHLIPHA+ LSVGLWVL GI+AFL
Sbjct: 168 SFASGGLLGDAFLHLIPHALEPHSHDTPAQPGHGHSHSGQGPI-LSVGLWVLSGIVAFLV 226
Query: 324 VEKFVRYVKGGHGHSHGK-------PIEKKKHTXXXXXXXXXXXXXXXXXXXYKKT---- 372
VEKFVR+VKGGHGH+H H+ K+
Sbjct: 227 VEKFVRHVKGGHGHAHAHGHGHSHGDSHAHGHSHAHGDRHECPSKGKPSSEDEKEAGGLR 286
Query: 373 KRVKAKTS-------------SQSNDDIAVAGYLNLAADFTHNFTDGLAIGASYLAGKHV 419
KR T ++ D+ V+GYLNLAAD HNFTDGLAIGAS+ G+ +
Sbjct: 287 KRRGGDTGPRDGPLKPQNPEEEKTGSDLRVSGYLNLAADLAHNFTDGLAIGASFRGGRGL 346
Query: 420 GIVTTITILFHEIPHEIGDFAILIHA 445
GI+TT+T+L HE+PHE+GDFAIL+ +
Sbjct: 347 GILTTMTVLLHEVPHEVGDFAILVQS 372
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 261 (96.9 bits), Expect = 5.8e-39, Sum P(2) = 5.8e-39
Identities = 52/127 (40%), Positives = 79/127 (62%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
+T G Y V +D+ LK VAL + ++ LP E D + ++ + D+ Y
Sbjct: 104 STTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMY 163
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ IGG+ Q +E+RE +ELPL + EL++++GI PP+G L+YGPPG GKT+LA+AVA
Sbjct: 164 ADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 223
Query: 154 ANFLKVV 160
A F++VV
Sbjct: 224 AAFIRVV 230
Score = 214 (80.4 bits), Expect = 5.8e-39, Sum P(2) = 5.8e-39
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 506
V KY+GE R++R++F A+++ P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ
Sbjct: 235 VQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQ 294
Query: 507 MDGFD 511
MDGFD
Sbjct: 295 MDGFD 299
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 261 (96.9 bits), Expect = 6.0e-39, Sum P(2) = 6.0e-39
Identities = 52/127 (40%), Positives = 79/127 (62%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
+T G Y V +D+ LK VAL + ++ LP E D + ++ + D+ Y
Sbjct: 105 STTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMY 164
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ IGG+ Q +E+RE +ELPL + EL++++GI PP+G L+YGPPG GKT+LA+AVA
Sbjct: 165 ADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 224
Query: 154 ANFLKVV 160
A F++VV
Sbjct: 225 AAFIRVV 231
Score = 214 (80.4 bits), Expect = 6.0e-39, Sum P(2) = 6.0e-39
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 506
V KY+GE R++R++F A+++ P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ
Sbjct: 236 VQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQ 295
Query: 507 MDGFD 511
MDGFD
Sbjct: 296 MDGFD 300
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 261 (96.9 bits), Expect = 6.0e-39, Sum P(2) = 6.0e-39
Identities = 52/127 (40%), Positives = 79/127 (62%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
+T G Y V +D+ LK VAL + ++ LP E D + ++ + D+ Y
Sbjct: 105 STTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMY 164
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ IGG+ Q +E+RE +ELPL + EL++++GI PP+G L+YGPPG GKT+LA+AVA
Sbjct: 165 ADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 224
Query: 154 ANFLKVV 160
A F++VV
Sbjct: 225 AAFIRVV 231
Score = 214 (80.4 bits), Expect = 6.0e-39, Sum P(2) = 6.0e-39
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 506
V KY+GE R++R++F A+++ P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ
Sbjct: 236 VQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQ 295
Query: 507 MDGFD 511
MDGFD
Sbjct: 296 MDGFD 300
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 261 (96.9 bits), Expect = 6.0e-39, Sum P(2) = 6.0e-39
Identities = 52/127 (40%), Positives = 79/127 (62%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
+T G Y V +D+ LK VAL + ++ LP E D + ++ + D+ Y
Sbjct: 105 STTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMY 164
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ IGG+ Q +E+RE +ELPL + EL++++GI PP+G L+YGPPG GKT+LA+AVA
Sbjct: 165 ADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 224
Query: 154 ANFLKVV 160
A F++VV
Sbjct: 225 AAFIRVV 231
Score = 214 (80.4 bits), Expect = 6.0e-39, Sum P(2) = 6.0e-39
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 506
V KY+GE R++R++F A+++ P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ
Sbjct: 236 VQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQ 295
Query: 507 MDGFD 511
MDGFD
Sbjct: 296 MDGFD 300
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 261 (96.9 bits), Expect = 6.0e-39, Sum P(2) = 6.0e-39
Identities = 52/127 (40%), Positives = 79/127 (62%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
+T G Y V +D+ LK VAL + ++ LP E D + ++ + D+ Y
Sbjct: 105 STTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMY 164
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ IGG+ Q +E+RE +ELPL + EL++++GI PP+G L+YGPPG GKT+LA+AVA
Sbjct: 165 ADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 224
Query: 154 ANFLKVV 160
A F++VV
Sbjct: 225 AAFIRVV 231
Score = 214 (80.4 bits), Expect = 6.0e-39, Sum P(2) = 6.0e-39
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 506
V KY+GE R++R++F A+++ P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ
Sbjct: 236 VQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQ 295
Query: 507 MDGFD 511
MDGFD
Sbjct: 296 MDGFD 300
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 261 (96.9 bits), Expect = 6.0e-39, Sum P(2) = 6.0e-39
Identities = 52/127 (40%), Positives = 79/127 (62%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
+T G Y V +D+ LK VAL + ++ LP E D + ++ + D+ Y
Sbjct: 105 STTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMY 164
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ IGG+ Q +E+RE +ELPL + EL++++GI PP+G L+YGPPG GKT+LA+AVA
Sbjct: 165 ADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 224
Query: 154 ANFLKVV 160
A F++VV
Sbjct: 225 AAFIRVV 231
Score = 214 (80.4 bits), Expect = 6.0e-39, Sum P(2) = 6.0e-39
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 506
V KY+GE R++R++F A+++ P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ
Sbjct: 236 VQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQ 295
Query: 507 MDGFD 511
MDGFD
Sbjct: 296 MDGFD 300
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 261 (96.9 bits), Expect = 6.0e-39, Sum P(2) = 6.0e-39
Identities = 52/127 (40%), Positives = 79/127 (62%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITY 93
+T G Y V +D+ LK VAL + ++ LP E D + ++ + D+ Y
Sbjct: 105 STTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMY 164
Query: 94 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 153
+ IGG+ Q +E+RE +ELPL + EL++++GI PP+G L+YGPPG GKT+LA+AVA
Sbjct: 165 ADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 224
Query: 154 ANFLKVV 160
A F++VV
Sbjct: 225 AAFIRVV 231
Score = 214 (80.4 bits), Expect = 6.0e-39, Sum P(2) = 6.0e-39
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 506
V KY+GE R++R++F A+++ P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ
Sbjct: 236 VQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQ 295
Query: 507 MDGFD 511
MDGFD
Sbjct: 296 MDGFD 300
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 251 (93.4 bits), Expect = 7.3e-39, Sum P(2) = 7.3e-39
Identities = 54/141 (38%), Positives = 84/141 (59%)
Query: 20 KLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPL 79
+L E + + ++T+G V +D+ LK VAL + ++ LP E D
Sbjct: 76 QLLEMVDSNTGIVQSTSGSTLCVRILSTIDRELLKPSASVALQRHSNALVDTLPPESDSS 135
Query: 80 VYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGT 139
++ + ++ +YS IGG Q +E+RE +ELPL + L++++GI PP+G LLYGPPGT
Sbjct: 136 IHLLGADEKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGT 195
Query: 140 GKTLLARAVASQLDANFLKVV 160
GKT+LA+AVA A F++VV
Sbjct: 196 GKTMLAKAVAHHTSAAFIRVV 216
Score = 224 (83.9 bits), Expect = 7.3e-39, Sum P(2) = 7.3e-39
Identities = 46/88 (52%), Positives = 58/88 (65%)
Query: 426 TILFHEIPHEIGDFAILI--HAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + V KY+GE RL+R++F AR++ P IIF+DEIDAI
Sbjct: 198 TMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIAT 257
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFD 511
+RF T ADRE+QR LMELLNQMDGFD
Sbjct: 258 KRFDAQTGADREVQRILMELLNQMDGFD 285
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 270 (100.1 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 64/148 (43%), Positives = 84/148 (56%)
Query: 22 TEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVY 81
T + E L E TN Y + +D KLK G V ++ + I+ LP E D V
Sbjct: 65 TSRKKEENGL-ELTNSQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVK 123
Query: 82 NMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGK 141
M ++ YS IGGL +QI+EL E I LP+ + E F+ +GI PPKG L+YGPPGTGK
Sbjct: 124 AMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGK 183
Query: 142 TLLARAVASQLDANFLKVVSRTIAIVLI 169
TLLARA A+Q A FLK+ + + I
Sbjct: 184 TLLARACAAQTKATFLKLAGPQLVQMFI 211
Score = 193 (73.0 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 34/65 (52%), Positives = 50/65 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLN
Sbjct: 206 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 265
Query: 506 QMDGF 510
Q+DGF
Sbjct: 266 QLDGF 270
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 254 (94.5 bits), Expect = 4.7e-38, Sum P(2) = 4.7e-38
Identities = 54/122 (44%), Positives = 76/122 (62%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 107
+D LK G V ++ + I+ LP E D V M ++ Y+ IGGL +QI+EL
Sbjct: 125 VDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELV 184
Query: 108 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAIV 167
E I LP+ + E F+++G+ PPKG LLYGPPGTGKTL+ARA A+Q +A FLK+ + +
Sbjct: 185 EAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 244
Query: 168 LI 169
I
Sbjct: 245 FI 246
Score = 215 (80.7 bits), Expect = 4.7e-38, Sum P(2) = 4.7e-38
Identities = 38/67 (56%), Positives = 52/67 (77%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S DRE+QRT++ELLN
Sbjct: 241 LVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN 300
Query: 506 QMDGFDS 512
Q+DGF S
Sbjct: 301 QLDGFSS 307
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 254 (94.5 bits), Expect = 7.4e-38, Sum P(2) = 7.4e-38
Identities = 55/122 (45%), Positives = 76/122 (62%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 107
+D LK G V ++ + I+ LP E D V M ++ Y+ IGGL +QI+EL
Sbjct: 124 VDPDTLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELV 183
Query: 108 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAIV 167
E I LP+ + E F+++GI PPKG LLYGPPGTGKTL+ARA A+Q +A FLK+ + +
Sbjct: 184 EAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 243
Query: 168 LI 169
I
Sbjct: 244 FI 245
Score = 213 (80.0 bits), Expect = 7.4e-38, Sum P(2) = 7.4e-38
Identities = 38/67 (56%), Positives = 52/67 (77%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S DRE+QRT++ELLN
Sbjct: 240 LVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN 299
Query: 506 QMDGFDS 512
Q+DGF S
Sbjct: 300 QLDGFSS 306
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 262 (97.3 bits), Expect = 8.5e-38, Sum P(2) = 8.5e-38
Identities = 58/123 (47%), Positives = 80/123 (65%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSH-EDPGDITYSAIGGLSEQIREL 106
+D ++LK G V ++ + I+ LP+E D V M E P + YS IGGL +QI +L
Sbjct: 140 IDASELKPGDLVGVNKDSYLIIDKLPQEYDNRVKAMEVIEKPSE-DYSDIGGLDKQIEDL 198
Query: 107 REVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAI 166
E I LP+L+ E F+++GI PPKG L++GPPGTGKTLLARA ASQ +A FLK+ +
Sbjct: 199 VEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQ 258
Query: 167 VLI 169
+ I
Sbjct: 259 MFI 261
Score = 204 (76.9 bits), Expect = 8.5e-38, Sum P(2) = 8.5e-38
Identities = 35/67 (52%), Positives = 52/67 (77%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V +IG+ A+++R+ FN A++ P IIF+DE+DAIG +RF S DRE+QRT++ELLN
Sbjct: 256 LVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLN 315
Query: 506 QMDGFDS 512
Q+DGF +
Sbjct: 316 QLDGFST 322
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 262 (97.3 bits), Expect = 8.5e-38, Sum P(2) = 8.5e-38
Identities = 58/123 (47%), Positives = 80/123 (65%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSH-EDPGDITYSAIGGLSEQIREL 106
+D ++LK G V ++ + I+ LP+E D V M E P + YS IGGL +QI +L
Sbjct: 140 IDASELKPGDLVGVNKDSYLIIDKLPQEYDNRVKAMEVIEKPSE-DYSDIGGLDKQIEDL 198
Query: 107 REVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAI 166
E I LP+L+ E F+++GI PPKG L++GPPGTGKTLLARA ASQ +A FLK+ +
Sbjct: 199 VEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQ 258
Query: 167 VLI 169
+ I
Sbjct: 259 MFI 261
Score = 204 (76.9 bits), Expect = 8.5e-38, Sum P(2) = 8.5e-38
Identities = 35/67 (52%), Positives = 52/67 (77%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V +IG+ A+++R+ FN A++ P IIF+DE+DAIG +RF S DRE+QRT++ELLN
Sbjct: 256 LVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLN 315
Query: 506 QMDGFDS 512
Q+DGF +
Sbjct: 316 QLDGFST 322
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 259 (96.2 bits), Expect = 2.5e-37, Sum P(2) = 2.5e-37
Identities = 57/122 (46%), Positives = 75/122 (61%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 107
+D KLK G V ++ + I+ LP E D V M ++ YS IGGL +QI+EL
Sbjct: 105 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 164
Query: 108 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAIV 167
E I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FLK+ + +
Sbjct: 165 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 224
Query: 168 LI 169
I
Sbjct: 225 FI 226
Score = 199 (75.1 bits), Expect = 2.5e-37, Sum P(2) = 2.5e-37
Identities = 35/70 (50%), Positives = 52/70 (74%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V +IG+ A+L+R+ F+ A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLN
Sbjct: 221 LVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGDREVQRTMLELLN 280
Query: 506 QMDGFDSLGQ 515
Q+DGF Q
Sbjct: 281 QLDGFQPTTQ 290
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 259 (96.2 bits), Expect = 4.4e-37, Sum P(2) = 4.4e-37
Identities = 57/122 (46%), Positives = 75/122 (61%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 107
+D KLK G V ++ + I+ LP E D V M ++ YS IGGL +QI+EL
Sbjct: 86 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 145
Query: 108 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAIV 167
E I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FLK+ + +
Sbjct: 146 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 205
Query: 168 LI 169
I
Sbjct: 206 FI 207
Score = 193 (73.0 bits), Expect = 4.4e-37, Sum P(2) = 4.4e-37
Identities = 34/65 (52%), Positives = 50/65 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLN
Sbjct: 202 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 261
Query: 506 QMDGF 510
Q+DGF
Sbjct: 262 QLDGF 266
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 259 (96.2 bits), Expect = 8.1e-37, Sum P(2) = 8.1e-37
Identities = 57/122 (46%), Positives = 75/122 (61%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 107
+D KLK G V ++ + I+ LP E D V M ++ YS IGGL +QI+EL
Sbjct: 98 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 157
Query: 108 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAIV 167
E I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FLK+ + +
Sbjct: 158 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 217
Query: 168 LI 169
I
Sbjct: 218 FI 219
Score = 193 (73.0 bits), Expect = 8.1e-37, Sum P(2) = 8.1e-37
Identities = 34/65 (52%), Positives = 50/65 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLN
Sbjct: 214 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 273
Query: 506 QMDGF 510
Q+DGF
Sbjct: 274 QLDGF 278
>UNIPROTKB|O42587 [details] [associations]
symbol:psmc3-a "26S protease regulatory subunit 6A-A"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 CTD:4913 TIGRFAMs:TIGR01242 EMBL:Y10461
RefSeq:NP_001080249.1 UniGene:Xl.12803 ProteinModelPortal:O42587
PRIDE:O42587 GeneID:379941 KEGG:xla:379941 Xenbase:XB-GENE-962533
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 Uniprot:O42587
Length = 405
Score = 259 (96.2 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 57/122 (46%), Positives = 75/122 (61%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 107
+D KLK G V ++ + I+ LP E D V M ++ YS IGGL +QI+EL
Sbjct: 124 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 183
Query: 108 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAIV 167
E I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FLK+ + +
Sbjct: 184 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 243
Query: 168 LI 169
I
Sbjct: 244 FI 245
Score = 193 (73.0 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 34/65 (52%), Positives = 50/65 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLN
Sbjct: 240 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 299
Query: 506 QMDGF 510
Q+DGF
Sbjct: 300 QLDGF 304
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 259 (96.2 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 57/122 (46%), Positives = 75/122 (61%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 107
+D KLK G V ++ + I+ LP E D V M ++ YS IGGL +QI+EL
Sbjct: 128 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 187
Query: 108 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAIV 167
E I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FLK+ + +
Sbjct: 188 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 247
Query: 168 LI 169
I
Sbjct: 248 FI 249
Score = 193 (73.0 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 34/65 (52%), Positives = 50/65 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLN
Sbjct: 244 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 303
Query: 506 QMDGF 510
Q+DGF
Sbjct: 304 QLDGF 308
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 259 (96.2 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 57/122 (46%), Positives = 75/122 (61%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 107
+D KLK G V ++ + I+ LP E D V M ++ YS IGGL +QI+EL
Sbjct: 140 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 199
Query: 108 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAIV 167
E I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FLK+ + +
Sbjct: 200 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 259
Query: 168 LI 169
I
Sbjct: 260 FI 261
Score = 193 (73.0 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 34/65 (52%), Positives = 50/65 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLN
Sbjct: 256 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 315
Query: 506 QMDGF 510
Q+DGF
Sbjct: 316 QLDGF 320
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 259 (96.2 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 57/122 (46%), Positives = 75/122 (61%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 107
+D KLK G V ++ + I+ LP E D V M ++ YS IGGL +QI+EL
Sbjct: 140 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 199
Query: 108 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAIV 167
E I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FLK+ + +
Sbjct: 200 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 259
Query: 168 LI 169
I
Sbjct: 260 FI 261
Score = 193 (73.0 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 34/65 (52%), Positives = 50/65 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLN
Sbjct: 256 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 315
Query: 506 QMDGF 510
Q+DGF
Sbjct: 316 QLDGF 320
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 259 (96.2 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 57/122 (46%), Positives = 75/122 (61%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 107
+D KLK G V ++ + I+ LP E D V M ++ YS IGGL +QI+EL
Sbjct: 140 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 199
Query: 108 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAIV 167
E I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FLK+ + +
Sbjct: 200 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 259
Query: 168 LI 169
I
Sbjct: 260 FI 261
Score = 193 (73.0 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 34/65 (52%), Positives = 50/65 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLN
Sbjct: 256 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 315
Query: 506 QMDGF 510
Q+DGF
Sbjct: 316 QLDGF 320
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 259 (96.2 bits), Expect = 3.2e-36, Sum P(2) = 3.2e-36
Identities = 57/122 (46%), Positives = 75/122 (61%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 107
+D KLK G V ++ + I+ LP E D V M ++ YS IGGL +QI+EL
Sbjct: 143 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 202
Query: 108 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAIV 167
E I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FLK+ + +
Sbjct: 203 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 262
Query: 168 LI 169
I
Sbjct: 263 FI 264
Score = 193 (73.0 bits), Expect = 3.2e-36, Sum P(2) = 3.2e-36
Identities = 34/65 (52%), Positives = 50/65 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLN
Sbjct: 259 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 318
Query: 506 QMDGF 510
Q+DGF
Sbjct: 319 QLDGF 323
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 259 (96.2 bits), Expect = 3.2e-36, Sum P(2) = 3.2e-36
Identities = 57/122 (46%), Positives = 75/122 (61%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 107
+D KLK G V ++ + I+ LP E D V M ++ YS IGGL +QI+EL
Sbjct: 143 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 202
Query: 108 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAIV 167
E I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FLK+ + +
Sbjct: 203 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 262
Query: 168 LI 169
I
Sbjct: 263 FI 264
Score = 193 (73.0 bits), Expect = 3.2e-36, Sum P(2) = 3.2e-36
Identities = 34/65 (52%), Positives = 50/65 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLN
Sbjct: 259 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 318
Query: 506 QMDGF 510
Q+DGF
Sbjct: 319 QLDGF 323
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 259 (96.2 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 57/122 (46%), Positives = 75/122 (61%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 107
+D KLK G V ++ + I+ LP E D V M ++ YS IGGL +QI+EL
Sbjct: 147 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 206
Query: 108 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAIV 167
E I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FLK+ + +
Sbjct: 207 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 266
Query: 168 LI 169
I
Sbjct: 267 FI 268
Score = 193 (73.0 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 34/65 (52%), Positives = 50/65 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLN
Sbjct: 263 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 322
Query: 506 QMDGF 510
Q+DGF
Sbjct: 323 QLDGF 327
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 251 (93.4 bits), Expect = 4.0e-36, Sum P(2) = 4.0e-36
Identities = 53/122 (43%), Positives = 76/122 (62%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 107
+D KL+ G V ++ + I+ LP E D V M ++ YS IGGL +QI+EL
Sbjct: 122 VDVDKLRPGDLVGINKDSYIILDTLPPEYDSRVKAMEIDEKPTEEYSDIGGLDKQIQELV 181
Query: 108 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAIV 167
E + LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q ++ +LK+ + +
Sbjct: 182 EAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQTNSTYLKLAGPQLVQM 241
Query: 168 LI 169
I
Sbjct: 242 FI 243
Score = 200 (75.5 bits), Expect = 4.0e-36, Sum P(2) = 4.0e-36
Identities = 36/67 (53%), Positives = 51/67 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF S DRE+QRT++ELLN
Sbjct: 238 LVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFDSEVSGDREVQRTMLELLN 297
Query: 506 QMDGFDS 512
Q+DGF S
Sbjct: 298 QLDGFSS 304
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 244 (91.0 bits), Expect = 7.8e-36, Sum P(2) = 7.8e-36
Identities = 53/114 (46%), Positives = 71/114 (62%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 107
+D KLK V ++ + I+ LP E D V M ++ TYS +GGL +QI EL
Sbjct: 135 VDPDKLKPNDLVGVNKDSYLILDTLPSEFDSRVKAMEVDEKPTETYSDVGGLDKQIEELV 194
Query: 108 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVS 161
E I LP+ + F+ +GI PKG L+YGPPGTGKTLLARA A+Q +A FLK+ +
Sbjct: 195 EAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLAA 248
Score = 207 (77.9 bits), Expect = 7.8e-36, Sum P(2) = 7.8e-36
Identities = 38/67 (56%), Positives = 51/67 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V YIGE A+L+R+ F A++ P IIF+DE+DAIG +RF S DRE+QRT++ELLN
Sbjct: 251 LVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLN 310
Query: 506 QMDGFDS 512
Q+DGF S
Sbjct: 311 QLDGFSS 317
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 259 (96.2 bits), Expect = 8.9e-36, Sum P(2) = 8.9e-36
Identities = 57/122 (46%), Positives = 75/122 (61%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 107
+D KLK G V ++ + I+ LP E D V M ++ YS IGGL +QI+EL
Sbjct: 135 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 194
Query: 108 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAIV 167
E I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FLK+ + +
Sbjct: 195 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 254
Query: 168 LI 169
I
Sbjct: 255 FI 256
Score = 188 (71.2 bits), Expect = 8.9e-36, Sum P(2) = 8.9e-36
Identities = 33/65 (50%), Positives = 49/65 (75%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V +IG+ A+L+R+ F A++ P IIF+DE+DA G +RF + DRE+QRT++ELLN
Sbjct: 251 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDATGTKRFDSEKAGDREVQRTMLELLN 310
Query: 506 QMDGF 510
Q+DGF
Sbjct: 311 QLDGF 315
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 250 (93.1 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 52/122 (42%), Positives = 77/122 (63%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 107
++ +L G + ++ + I+ LP E D V M ++ YS IGGLS+QI EL
Sbjct: 139 VEPEELHPGDLIGVNKDSYLIIDKLPSEYDSRVKAMEVDEKPTERYSDIGGLSKQIEELF 198
Query: 108 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAIV 167
E I LP+ + F+++G+ PPKGCL++GPPGTGKTLLARA A+Q +A FLK+ + + +
Sbjct: 199 EAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQM 258
Query: 168 LI 169
I
Sbjct: 259 FI 260
Score = 199 (75.1 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 35/67 (52%), Positives = 51/67 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLN
Sbjct: 255 LVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 314
Query: 506 QMDGFDS 512
Q+DGF S
Sbjct: 315 QLDGFSS 321
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 247 (92.0 bits), Expect = 2.6e-35, Sum P(2) = 2.6e-35
Identities = 52/122 (42%), Positives = 74/122 (60%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 107
+D +KLK + ++ + ++ LP E D V M ++ YS IGGL +QI EL
Sbjct: 154 VDPSKLKPNDLIGVNKDSYLVLDTLPSEYDSRVKAMEVDEKPTEDYSDIGGLDKQIEELI 213
Query: 108 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAIV 167
E + LP+ + F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FLK+ + + +
Sbjct: 214 EAVVLPMKQADKFKNLGIKPPKGALMYGPPGTGKTLLARACAAQSGATFLKLAAPQLVQM 273
Query: 168 LI 169
I
Sbjct: 274 FI 275
Score = 200 (75.5 bits), Expect = 2.6e-35, Sum P(2) = 2.6e-35
Identities = 36/67 (53%), Positives = 51/67 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF S DRE+QRT++ELLN
Sbjct: 270 LVQMFIGDGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSDKSGDREVQRTMLELLN 329
Query: 506 QMDGFDS 512
Q+DGF S
Sbjct: 330 QLDGFGS 336
>FB|FBgn0028684 [details] [associations]
symbol:Rpt5 "Regulatory particle triple-A ATPase 5"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 HSSP:Q01853 TIGRFAMs:TIGR01242 GO:GO:0008540
ChiTaRS:PSMC3 FlyBase:FBgn0028684 EMBL:AF134402
ProteinModelPortal:Q9XZC3 STRING:Q9XZC3 PRIDE:Q9XZC3
InParanoid:Q9XZC3 ArrayExpress:Q9XZC3 Bgee:Q9XZC3 Uniprot:Q9XZC3
Length = 431
Score = 244 (91.0 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 53/122 (43%), Positives = 73/122 (59%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 107
+D KLK G ++ I+ LP E D V M ++ +S IGGL +QI+EL
Sbjct: 133 VDAEKLKPGDLAGVNKDFYLILETLPAEYDARVKAMEVDERPTEQFSDIGGLDKQIQELI 192
Query: 108 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAIV 167
E + LP+ + E F+ +GI PPKG +LYGPPGTGKTLLARA A+Q + FLK+ + +
Sbjct: 193 EAVVLPMTHKEKFKNLGIHPPKGVILYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQM 252
Query: 168 LI 169
I
Sbjct: 253 FI 254
Score = 193 (73.0 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 34/67 (50%), Positives = 51/67 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLN
Sbjct: 249 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 308
Query: 506 QMDGFDS 512
Q++GF S
Sbjct: 309 QLNGFSS 315
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 242 (90.2 bits), Expect = 2.9e-34, Sum P(2) = 2.9e-34
Identities = 60/154 (38%), Positives = 87/154 (56%)
Query: 16 DYRKKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPRE 75
D + T+ A ++ R T P VVG +D +LK G V ++ + I+ LP E
Sbjct: 104 DLDAQKTKCAVIKTSTRATYFLP--VVGL---VDPDELKPGDLVGVNKDSYLILEKLPAE 158
Query: 76 VDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYG 135
D V M ++ YS IGG +QI+EL E + LP+ + + F +GI PPKG L+YG
Sbjct: 159 YDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYG 218
Query: 136 PPGTGKTLLARAVASQLDANFLKVVSRTIAIVLI 169
PPGTGKT++ARAVA+Q + FLK+ + + I
Sbjct: 219 PPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFI 252
Score = 194 (73.4 bits), Expect = 2.9e-34, Sum P(2) = 2.9e-34
Identities = 34/65 (52%), Positives = 50/65 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLN
Sbjct: 247 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 306
Query: 506 QMDGF 510
Q+DGF
Sbjct: 307 QLDGF 311
Score = 37 (18.1 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 136 PPGTGKTLLARAVASQLDANFLKV 159
PP GK A V +D LK+
Sbjct: 6 PPKDGKNPEAMEVEDAIDEEILKM 29
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 242 (90.2 bits), Expect = 2.9e-34, Sum P(2) = 2.9e-34
Identities = 60/154 (38%), Positives = 87/154 (56%)
Query: 16 DYRKKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPRE 75
D + T+ A ++ R T P VVG +D +LK G V ++ + I+ LP E
Sbjct: 104 DLDAQKTKCAVIKTSTRATYFLP--VVGL---VDPDELKPGDLVGVNKDSYLILEKLPAE 158
Query: 76 VDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYG 135
D V M ++ YS IGG +QI+EL E + LP+ + + F +GI PPKG L+YG
Sbjct: 159 YDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYG 218
Query: 136 PPGTGKTLLARAVASQLDANFLKVVSRTIAIVLI 169
PPGTGKT++ARAVA+Q + FLK+ + + I
Sbjct: 219 PPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFI 252
Score = 194 (73.4 bits), Expect = 2.9e-34, Sum P(2) = 2.9e-34
Identities = 34/65 (52%), Positives = 50/65 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLN
Sbjct: 247 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 306
Query: 506 QMDGF 510
Q+DGF
Sbjct: 307 QLDGF 311
Score = 37 (18.1 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 136 PPGTGKTLLARAVASQLDANFLKV 159
PP GK A V +D LK+
Sbjct: 6 PPKDGKNPEAMEVEDAIDEEILKM 29
>WB|WBGene00044067 [details] [associations]
symbol:hke-4.1 species:6239 "Caenorhabditis elegans"
[GO:0016020 "membrane" evidence=IEA] [GO:0030001 "metal ion
transport" evidence=IEA] [GO:0046873 "metal ion transmembrane
transporter activity" evidence=IEA] [GO:0055085 "transmembrane
transport" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR003689 Pfam:PF02535 GO:GO:0016021
GO:GO:0046873 eggNOG:COG0428 GeneTree:ENSGT00700000104299
EMBL:Z82285 PIR:T25420 RefSeq:NP_503070.2 STRING:Q9XUC4
PaxDb:Q9XUC4 EnsemblMetazoa:T28F3.3 GeneID:178509
KEGG:cel:CELE_T28F3.3 CTD:178509 WormBase:T28F3.3 InParanoid:Q9XUC4
OMA:SKYQAIR NextBio:901418 Uniprot:Q9XUC4
Length = 393
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 89/247 (36%), Positives = 124/247 (50%)
Query: 210 NEPYHQDVKHP--ITLQVWGEALLSTILISLAPFLILFVVPLDTATGNENFLKVXXXXXX 267
N H++++H TL+VW +L + + ISLAP +LF +P A G FLK+
Sbjct: 66 NHTSHREIQHSRLSTLKVWVFSLSAVVGISLAPCTLLFFIPAQHANGP--FLKILLAFGA 123
Query: 268 XXXXXDAFLHLIPHAIGAXXXXXXXXXXXXXXXXXXXIAD----LSVGLWVLFGILAFLC 323
DA LH+IPH++ D L VG +V+ GIL F+
Sbjct: 124 GGLLGDALLHIIPHSLSPHDHSHDHHDHNHSHKEHDHSHDHSNQLRVGTFVIAGILVFMM 183
Query: 324 VEKFVRYVKGGHGHSHGKPIEKKKHTXXXXXXXXXXXXXXXXXXXYKKTKRVKAKTSSQS 383
VE+ VR +KGGH HSH + H ++ + +K
Sbjct: 184 VEQLVRIIKGGHCHSH-----ENGHIVADEHRHLNEHDHEHSEEKKQQVEGLK------- 231
Query: 384 NDDIAVAGYLNLAADFTHNFTDGLAIGASYLAGKHVGIVTTITILFHEIPHEIGDFAILI 443
D+ + YLNL ADF HN TDGLAIGAS+ AG +G +TT+T+L HE+PHE+GDFAIL+
Sbjct: 232 --DVKASAYLNLVADFVHNVTDGLAIGASFSAGNTLGWITTLTVLLHELPHEVGDFAILV 289
Query: 444 HAIVDKY 450
+ KY
Sbjct: 290 QSGFSKY 296
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 237 (88.5 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 51/122 (41%), Positives = 73/122 (59%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 107
+D KLK G + ++ + I+ LP E D V M ++ Y+ IGGL +QI E+
Sbjct: 165 VDHEKLKPGDLIGVNKDSYLILDTLPAEYDNRVKAMEVDEKPTEKYTDIGGLDKQIEEIV 224
Query: 108 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAIV 167
E I P+ E F+++GI PKG L+YGPPGTGKTLLARA A++ +A FLK+ + +
Sbjct: 225 EAIVWPMKEAERFKKLGIKAPKGALMYGPPGTGKTLLARACAAETNATFLKLAGPQLVQM 284
Query: 168 LI 169
I
Sbjct: 285 FI 286
Score = 197 (74.4 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 35/67 (52%), Positives = 51/67 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V +IG+ A+L+R+ F A++ P IIF+DE+DA+G +RF S DRE+QRT++ELLN
Sbjct: 281 LVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELDAVGTKRFDSEKSGDREVQRTMLELLN 340
Query: 506 QMDGFDS 512
Q+DGF S
Sbjct: 341 QLDGFAS 347
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 225 (84.3 bits), Expect = 7.1e-32, Sum P(2) = 7.1e-32
Identities = 57/138 (41%), Positives = 76/138 (55%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 107
+D KLK G V ++ + I+ LP E D V M ++ YS IGGL +QI+E+R
Sbjct: 141 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQEVR 200
Query: 108 EV----------------IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQ 151
E I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q
Sbjct: 201 EARHLTSLLCLSASLVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 260
Query: 152 LDANFLKVVSRTIAIVLI 169
A FLK+ + + I
Sbjct: 261 TKATFLKLAGPQLVQMFI 278
Score = 193 (73.0 bits), Expect = 7.1e-32, Sum P(2) = 7.1e-32
Identities = 34/65 (52%), Positives = 50/65 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLN
Sbjct: 273 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 332
Query: 506 QMDGF 510
Q+DGF
Sbjct: 333 QLDGF 337
>UNIPROTKB|E7ESG6 [details] [associations]
symbol:SLC39A7 "Zinc transporter SLC39A7" species:9606
"Homo sapiens" [GO:0016020 "membrane" evidence=IEA] [GO:0046873
"metal ion transmembrane transporter activity" evidence=IEA]
InterPro:IPR003689 Pfam:PF02535 GO:GO:0016020 GO:GO:0046873
EMBL:AL662824 EMBL:AL844527 EMBL:CR759733 EMBL:CR936877
EMBL:CR759786 EMBL:CR847841 EMBL:CR354565 HGNC:HGNC:4927
ChiTaRS:SLC39A7 IPI:IPI01008853 Ensembl:ENST00000546594
Ensembl:ENST00000547858 Ensembl:ENST00000548327
Ensembl:ENST00000549453 Ensembl:ENST00000551360 Uniprot:E7ESG6
Length = 374
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 84/191 (43%), Positives = 104/191 (54%)
Query: 275 FLHLIPHAIGAXXXXXXXXXXXXXXXXXXXIADLSVGLWVLFGILAFLCVEKFVRYVKGG 334
FLHLIPHA+ LSVGLWVL GI+AFL VEKFVR+VKGG
Sbjct: 90 FLHLIPHALEPHSHHTLEQPGHGHSHSGQGPI-LSVGLWVLSGIVAFLVVEKFVRHVKGG 148
Query: 335 HGHSHGKPIEKKKHTXXXXXXXXXXXXXXXXXXXY---KKTKRVKAKT--SSQSND---- 385
HGHSHG HT K+T+ V+ + S+ D
Sbjct: 149 HGHSHGHG-HAHSHTRGSHGHGRQERSTKEKQSSEEEEKETRGVQKRRGGSTVPKDGPVR 207
Query: 386 -----------DIAVAGYLNLAADFTHNFTDGLAIGASYLAGKHVGIVTTITILFHEIPH 434
D+ V+GYLNLAAD HNFTDGLAIGAS+ G+ +GI+TT+T+L HE+PH
Sbjct: 208 PQNAEEEKRGLDLRVSGYLNLAADLAHNFTDGLAIGASFRGGRGLGILTTMTVLLHEVPH 267
Query: 435 EIGDFAILIHA 445
E+GDFAIL+ +
Sbjct: 268 EVGDFAILVQS 278
>UNIPROTKB|J9NWB0 [details] [associations]
symbol:J9NWB0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074818 EMBL:AAEX03014432
Ensembl:ENSCAFT00000039483 OMA:AGSELIQ Uniprot:J9NWB0
Length = 436
Score = 219 (82.2 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 37/69 (53%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ KY+G+ +++RE F A +H P I+F+DEIDAIG RR+ + +REIQRT++ELLN
Sbjct: 253 LIQKYLGDGPKVVRESFRVAEEHAPSIVFIDEIDAIGTRRYDSNSGGEREIQRTMLELLN 312
Query: 506 QMDGFDSLG 514
Q+DGFDS G
Sbjct: 313 QLDGFDSRG 321
Score = 196 (74.1 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 51/130 (39%), Positives = 73/130 (56%)
Query: 34 TTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHED----PG 89
T+ G + V +DK L+ G L+ ++ + DPLV M E P
Sbjct: 125 TSVGSEHYVSILSFVDKDLLEPGCSNLLNHKLHAVIVVFMDDTDPLVTVMKVEKVEKAPQ 184
Query: 90 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 149
+ TY+ I GL QI+E++E +ELPL +PE ++ +GI PPKG +LYGPPGT K AVA
Sbjct: 185 E-TYADIRGLDNQIQEIKESLELPLTHPENYEEMGIKPPKGVILYGPPGTVK-----AVA 238
Query: 150 SQLDANFLKV 159
++ A FL+V
Sbjct: 239 NRTSATFLRV 248
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 208 (78.3 bits), Expect = 3.4e-31, Sum P(2) = 3.4e-31
Identities = 38/67 (56%), Positives = 51/67 (76%)
Query: 92 TYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQ 151
T+ IGG QI+EL+E +ELPL +PE ++ +GIT PKG +LYG PGTGKTLLA+AVA+
Sbjct: 181 TFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKAVANS 240
Query: 152 LDANFLK 158
A F++
Sbjct: 241 TSATFIR 247
Score = 205 (77.2 bits), Expect = 3.4e-31, Sum P(2) = 3.4e-31
Identities = 36/69 (52%), Positives = 53/69 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V K GE ARL+R++F A++ P I+F+DEIDA+G +RF + ++E+QRTL+ELLN
Sbjct: 253 LVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEIDAVGTKRFDTSSRGEQEVQRTLLELLN 312
Query: 506 QMDGFDSLG 514
Q+DGF+S G
Sbjct: 313 QLDGFESRG 321
>UNIPROTKB|E9PMD8 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR003959
Pfam:PF00004 GO:GO:0005524 GO:GO:0001824 EMBL:AC090559
HGNC:HGNC:9549 ChiTaRS:PSMC3 IPI:IPI00978171 SMR:E9PMD8
Ensembl:ENST00000530651 Ensembl:ENST00000530887 Uniprot:E9PMD8
Length = 260
Score = 259 (96.2 bits), Expect = 4.5e-31, Sum P(2) = 4.5e-31
Identities = 57/122 (46%), Positives = 75/122 (61%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 107
+D KLK G V ++ + I+ LP E D V M ++ YS IGGL +QI+EL
Sbjct: 105 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 164
Query: 108 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAIV 167
E I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FLK+ + +
Sbjct: 165 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 224
Query: 168 LI 169
I
Sbjct: 225 FI 226
Score = 107 (42.7 bits), Expect = 4.5e-31, Sum P(2) = 4.5e-31
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 485
+V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +R
Sbjct: 221 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKR 260
>UNIPROTKB|E9PN50 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AC090559
HGNC:HGNC:9549 ChiTaRS:PSMC3 IPI:IPI00979951
ProteinModelPortal:E9PN50 SMR:E9PN50 Ensembl:ENST00000531051
ArrayExpress:E9PN50 Bgee:E9PN50 Uniprot:E9PN50
Length = 239
Score = 258 (95.9 bits), Expect = 6.0e-31, Sum P(2) = 6.0e-31
Identities = 63/159 (39%), Positives = 91/159 (57%)
Query: 11 HKTLQDYRKKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMR 70
+KTL + E +V+ +E +G + +R+ A +K+ TR ++ + I+
Sbjct: 48 NKTLPYLVSNVIELLDVDPNDQEE-DGANIDLDSQRKGKCAVIKTSTRQGVNKDSYLILE 106
Query: 71 YLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKG 130
LP E D V M ++ YS IGGL +QI+EL E I LP+ + E F+ +GI PPKG
Sbjct: 107 TLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKG 166
Query: 131 CLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAIVLI 169
L+YGPPGTGKTLLARA A+Q A FLK+ + + I
Sbjct: 167 VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFI 205
Score = 107 (42.7 bits), Expect = 6.0e-31, Sum P(2) = 6.0e-31
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 485
+V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +R
Sbjct: 200 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKR 239
>UNIPROTKB|E9PKD5 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC090559 HGNC:HGNC:9549 ChiTaRS:PSMC3
IPI:IPI00978735 ProteinModelPortal:E9PKD5 SMR:E9PKD5 PRIDE:E9PKD5
Ensembl:ENST00000524447 ArrayExpress:E9PKD5 Bgee:E9PKD5
Uniprot:E9PKD5
Length = 294
Score = 193 (73.0 bits), Expect = 5.8e-30, Sum P(3) = 5.8e-30
Identities = 34/65 (52%), Positives = 50/65 (76%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+V +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLN
Sbjct: 200 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 259
Query: 506 QMDGF 510
Q+DGF
Sbjct: 260 QLDGF 264
Score = 177 (67.4 bits), Expect = 5.8e-30, Sum P(3) = 5.8e-30
Identities = 36/65 (55%), Positives = 45/65 (69%)
Query: 105 ELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTI 164
EL E I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FLK+ +
Sbjct: 141 ELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQL 200
Query: 165 AIVLI 169
+ I
Sbjct: 201 VQMFI 205
Score = 50 (22.7 bits), Expect = 5.8e-30, Sum P(3) = 5.8e-30
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNM 83
+D KLK G V ++ + I+ LP E D V M
Sbjct: 105 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAM 140
>UNIPROTKB|J3QSA9 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031595 "nuclear proteasome complex"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
EMBL:AC015651 ChiTaRS:PSMC5 HGNC:HGNC:9552 Ensembl:ENST00000585123
Uniprot:J3QSA9
Length = 257
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 63/121 (52%), Positives = 82/121 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV + +D + RVAL + T+ + LP +VDPLV M E D TY IGG
Sbjct: 86 KFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGG 145
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++
Sbjct: 146 LDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 205
Query: 159 V 159
V
Sbjct: 206 V 206
Score = 143 (55.4 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 30/67 (44%), Positives = 41/67 (61%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + H I + +V K+IGE AR++RE+F AR+H P IIFMDEID+IG
Sbjct: 189 TLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 248
Query: 484 RRFSEGT 490
R G+
Sbjct: 249 SRLEGGS 255
>UNIPROTKB|J3KRP2 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031595 "nuclear proteasome complex"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003959 Pfam:PF00004
GO:GO:0005524 EMBL:AC015651 ChiTaRS:PSMC5 HGNC:HGNC:9552
Ensembl:ENST00000584320 Uniprot:J3KRP2
Length = 241
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 63/121 (52%), Positives = 82/121 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV + +D + RVAL + T+ + LP +VDPLV M E D TY IGG
Sbjct: 86 KFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGG 145
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++
Sbjct: 146 LDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 205
Query: 159 V 159
V
Sbjct: 206 V 206
>UNIPROTKB|J3QLH6 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031595 "nuclear proteasome complex"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003959 Pfam:PF00004
GO:GO:0005524 EMBL:AC015651 ChiTaRS:PSMC5 HGNC:HGNC:9552
Ensembl:ENST00000581842 Uniprot:J3QLH6
Length = 215
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 63/121 (52%), Positives = 82/121 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV + +D + RVAL + T+ + LP +VDPLV M E D TY IGG
Sbjct: 86 KFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGG 145
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++
Sbjct: 146 LDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 205
Query: 159 V 159
V
Sbjct: 206 V 206
>UNIPROTKB|J3QRW1 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AC015651
ChiTaRS:PSMC5 HGNC:HGNC:9552 Ensembl:ENST00000579708 Uniprot:J3QRW1
Length = 143
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 63/121 (52%), Positives = 82/121 (67%)
Query: 39 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 98
++VV + +D + RVAL + T+ + LP +VDPLV M E D TY IGG
Sbjct: 17 KFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGG 76
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
L +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++
Sbjct: 77 LDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 136
Query: 159 V 159
V
Sbjct: 137 V 137
>UNIPROTKB|H0YJX2 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AL133453
HGNC:HGNC:9553 Ensembl:ENST00000555175 Uniprot:H0YJX2
Length = 67
Score = 305 (112.4 bits), Expect = 3.7e-27, P = 3.7e-27
Identities = 58/63 (92%), Positives = 62/63 (98%)
Query: 445 AIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 504
+IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLME++
Sbjct: 5 SIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMEIM 64
Query: 505 NQM 507
Q+
Sbjct: 65 KQL 67
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 236 (88.1 bits), Expect = 4.9e-27, Sum P(2) = 4.9e-27
Identities = 42/71 (59%), Positives = 60/71 (84%)
Query: 91 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 150
+TY IGGL+ Q++E+RE+IELPL PELF+ GI+PP+G LLYGPPGTGKT++ARAVA+
Sbjct: 344 VTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVAN 403
Query: 151 QLDANFLKVVS 161
++ A ++ V++
Sbjct: 404 EVGA-YVSVIN 413
Score = 192 (72.6 bits), Expect = 5.2e-22, Sum P(2) = 5.2e-22
Identities = 45/118 (38%), Positives = 72/118 (61%)
Query: 45 RRQLDKAKLKSGTRVALDMTTLTIMRYLP--REVDPLVYNMSHEDPGDITYSAIGGLSEQ 102
RR L K ++VA + +T+ +L ++ P D ++++S IGGL E
Sbjct: 571 RRVLRKQPNLPDSKVA-GLVKITLKDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGL-EN 628
Query: 103 IR-ELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
I+ +L++ +E PL +PE F ++GI PPKG LLYGPPG KT++A+A+A++ NFL +
Sbjct: 629 IKLKLKQAVEWPLKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAI 686
Score = 144 (55.7 bits), Expect = 4.9e-27, Sum P(2) = 4.9e-27
Identities = 36/90 (40%), Positives = 53/90 (58%)
Query: 426 TILFHEIPHEIG-DF-AILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G +F AI +++KY+GES R +RE+F AR P IIF DE+DA+
Sbjct: 669 TMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAV 728
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDSL 513
R S + A R L +LL +MDG + L
Sbjct: 729 ERGSS-SGAGNVADRVLAQLLTEMDGIEQL 757
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 31/91 (34%), Positives = 52/91 (57%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E+G + +I+ I+ K+ GE+ +R++F A P IIF+DE+DA+
Sbjct: 395 TMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCP 454
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDSLG 514
+R EG + E +R + LL MDG S G
Sbjct: 455 KR--EGAQNEVE-KRVVASLLTLMDGIGSEG 482
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 236 (88.1 bits), Expect = 7.6e-27, Sum P(2) = 7.6e-27
Identities = 55/145 (37%), Positives = 85/145 (58%)
Query: 21 LTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKL--KSGTRVALDMTTLTIMRYLPREVDP 78
L E E++ G ++ R L A + K T + +++ T + ++
Sbjct: 282 LVEVTELKCSFESARGGNEQLINEERLLKSACVGAKCNTDIFYFISSTTRINFIK----- 336
Query: 79 LVYNMSHEDPGD--ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGP 136
V+ S E+ +TY IGGLS Q++ +RE+IELPL PELF+ GI PP+G LLYGP
Sbjct: 337 -VHTNSEEEDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGP 395
Query: 137 PGTGKTLLARAVASQLDANFLKVVS 161
PGTGKT++ARAVA+++ A ++ V++
Sbjct: 396 PGTGKTMIARAVANEVGA-YVSVIN 419
Score = 198 (74.8 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 46/118 (38%), Positives = 74/118 (62%)
Query: 45 RRQLDKAKLKSGTRVALDMTTLTIMRYLP--REVDPLVYNMSHEDPGDITYSAIGGLSEQ 102
RR L+K S +++A + +T+ +L ++ P D ++++S IGGL E
Sbjct: 577 RRVLNKQPNLSDSKMA-GLVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGL-EN 634
Query: 103 IR-ELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
I+ +L++ +E PL +PE F R+GI PPKG LLYGPPG KT++A+A+A++ NFL +
Sbjct: 635 IKLKLKQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAI 692
Score = 144 (55.7 bits), Expect = 7.6e-27, Sum P(2) = 7.6e-27
Identities = 36/90 (40%), Positives = 53/90 (58%)
Query: 426 TILFHEIPHEIG-DF-AILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G +F AI +++KY+GES R +RE+F AR P IIF DE+DA+
Sbjct: 675 TMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVSPSIIFFDELDALAI 734
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDSL 513
R S + A R L +LL +MDG + L
Sbjct: 735 ERGSS-SGAGNVADRVLAQLLTEMDGIEQL 763
Score = 125 (49.1 bits), Expect = 7.4e-25, Sum P(2) = 7.4e-25
Identities = 31/91 (34%), Positives = 52/91 (57%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E+G + +I+ I+ K+ GE+ +R++F A P IIF+DE+DA+
Sbjct: 401 TMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCP 460
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDSLG 514
+R EG + E +R + LL MDG S G
Sbjct: 461 KR--EGAQNEVE-KRVVASLLTLMDGIGSEG 488
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 234 (87.4 bits), Expect = 8.0e-27, Sum P(2) = 8.0e-27
Identities = 42/71 (59%), Positives = 59/71 (83%)
Query: 91 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 150
+TY IGGL+ Q++E+RE+IELPL PELF+ GI PP+G LLYGPPGTGKT++ARAVA+
Sbjct: 341 VTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVAN 400
Query: 151 QLDANFLKVVS 161
++ A ++ V++
Sbjct: 401 EVGA-YVSVIN 410
Score = 187 (70.9 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 41/117 (35%), Positives = 69/117 (58%)
Query: 45 RRQLDKAKLKSGTRVALDMTTLTIMRYLP--REVDPLVYNMSHEDPGDITYSAIGGLSEQ 102
RR L + +++A + +T+ +L ++ P D ++++S IGGL
Sbjct: 568 RRVLRRQPNLPDSKMA-GLVKITLKDFLQGMNDIRPSAMREVAVDVPNVSWSDIGGLENV 626
Query: 103 IRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
+L++ +E PL +PE F ++GI PPKG LLYGPPG KT++A+A+A++ NFL +
Sbjct: 627 KLKLKQAVEWPLKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAI 683
Score = 144 (55.7 bits), Expect = 8.0e-27, Sum P(2) = 8.0e-27
Identities = 36/90 (40%), Positives = 53/90 (58%)
Query: 426 TILFHEIPHEIG-DF-AILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G +F AI +++KY+GES R +RE+F AR P IIF DE+DA+
Sbjct: 666 TMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAV 725
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDSL 513
R S + A R L +LL +MDG + L
Sbjct: 726 ERGSS-SGAGNVADRVLAQLLTEMDGIEQL 754
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 31/91 (34%), Positives = 52/91 (57%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E+G + +I+ I+ K+ GE+ +R++F A P IIF+DE+DA+
Sbjct: 392 TMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCP 451
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDSLG 514
+R EG + E +R + LL MDG S G
Sbjct: 452 KR--EGAQNEVE-KRVVASLLTLMDGIGSEG 479
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 224 (83.9 bits), Expect = 2.8e-25, Sum P(2) = 2.8e-25
Identities = 57/168 (33%), Positives = 93/168 (55%)
Query: 2 TTPVVDEVRHKTLQDYRKKLTEHAEV-EGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVA 60
++P V+E K +D + +V E +R +N + LD+ ++ T +
Sbjct: 180 SSPSVNESEPKATEDLDELSPGSYKVKEIHIRSPSNLIEAISDM--SLDEPRIYKFTAAS 237
Query: 61 -LDMTTLTIMRYLPREV-DPLVYNMSHED-------PGDITYSAIGGLSEQIRELREVIE 111
+++ T +++ LP E YN E+ P +T+S+IGGL QI ++R+++E
Sbjct: 238 SMEIETPDLLK-LPHEDRTQSAYNQGSEETQNFDGPPSAVTFSSIGGLQAQIAQIRDIVE 296
Query: 112 LPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
LP NPELF+ I PP+G LLYGPPGTGKT++ RAVA++ +A +
Sbjct: 297 LPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANAQVFTI 344
Score = 184 (69.8 bits), Expect = 9.5e-21, Sum P(2) = 9.5e-21
Identities = 52/157 (33%), Positives = 79/157 (50%)
Query: 5 VVDEVRHKTLQDYRKKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRV--ALD 62
V +E+ L+D + HA V L + +R + K SG + A+
Sbjct: 463 VPNEINDAQLEDLASRT--HAYVGADLAAVVREAA-LRAIKRTISLQKDTSGLDIFGAVQ 519
Query: 63 MTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQR 122
M L R+ + M E P ++ +S IGG E ++L+E +E PL + E F R
Sbjct: 520 MDDLEFALSSVRQSAMREFMM--ESP-NVHWSDIGGQEEVKQKLKESVEWPLTHGETFSR 576
Query: 123 VGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
+G+ PPKG LLYGPPG KT+ A+A+A++ NF+ V
Sbjct: 577 LGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAV 613
Score = 141 (54.7 bits), Expect = 2.8e-25, Sum P(2) = 2.8e-25
Identities = 36/90 (40%), Positives = 52/90 (57%)
Query: 426 TILFHEIPHEIG-DF-AILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
TI I E G +F A+ + DK++GES R +R++F AR P +IF DEIDA+
Sbjct: 596 TITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTA 655
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDSL 513
R E S+DR + LLN++DG ++L
Sbjct: 656 NR-GEDNSSDRVVAA----LLNELDGIEAL 680
Score = 135 (52.6 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 27/63 (42%), Positives = 42/63 (66%)
Query: 445 AIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 504
++V KY+GE+ +R++F AR HQP IIF+DEIDA+ +R + + A+ TL+ LL
Sbjct: 348 SVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAESRAVATLLTLL 407
Query: 505 NQM 507
+ M
Sbjct: 408 DGM 410
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 220 (82.5 bits), Expect = 4.3e-25, Sum P(2) = 4.3e-25
Identities = 40/71 (56%), Positives = 57/71 (80%)
Query: 91 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 150
+TY IGGL+ Q++ +RE+IELPL PELF+ GI P+G LLYGPPGTGKT++ARAVA+
Sbjct: 350 VTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409
Query: 151 QLDANFLKVVS 161
++ A ++ V++
Sbjct: 410 EVGA-YVSVIN 419
Score = 195 (73.7 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 46/118 (38%), Positives = 72/118 (61%)
Query: 45 RRQLDKAKLKSGTRVALDMTTLTIMRYLP--REVDPLVYNMSHEDPGDITYSAIGGLSEQ 102
RR L K ++VA M +T+ +L ++ P D ++++S IGGL E
Sbjct: 577 RRVLRKQPNLPDSKVA-GMVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGL-EN 634
Query: 103 IR-ELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
I+ +L++ +E PL +P+ F R+GI PPKG LLYGPPG KT++A+A+A++ NFL +
Sbjct: 635 IKLKLKQAVEWPLKHPKSFSRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAI 692
Score = 144 (55.7 bits), Expect = 4.3e-25, Sum P(2) = 4.3e-25
Identities = 36/90 (40%), Positives = 53/90 (58%)
Query: 426 TILFHEIPHEIG-DF-AILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G +F AI +++KY+GES R +RE+F AR P IIF DE+DA+
Sbjct: 675 TMIAKALANESGLNFLAIKGPELMNKYVGESERAVREVFRKARAVAPSIIFFDELDALAV 734
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDSL 513
R S + A R L +LL +MDG + L
Sbjct: 735 ERGSS-SGAGNVADRVLAQLLTEMDGIEQL 763
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 31/91 (34%), Positives = 53/91 (58%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E+G + +I+ I+ K+ GE+ +R++F A P IIF+DE+DA+
Sbjct: 401 TMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCP 460
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDSLG 514
+R EG ++ E +R + LL MDG S G
Sbjct: 461 KR--EGAQSEVE-KRVVASLLTLMDGIGSEG 488
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 220 (82.5 bits), Expect = 5.2e-25, Sum P(2) = 5.2e-25
Identities = 40/71 (56%), Positives = 57/71 (80%)
Query: 91 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 150
+TY IGGL+ Q++ +RE+IELPL PELF+ GI P+G LLYGPPGTGKT++ARAVA+
Sbjct: 350 VTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409
Query: 151 QLDANFLKVVS 161
++ A ++ V++
Sbjct: 410 EVGA-YVSVIN 419
Score = 195 (73.7 bits), Expect = 3.5e-22, Sum P(2) = 3.5e-22
Identities = 46/118 (38%), Positives = 72/118 (61%)
Query: 45 RRQLDKAKLKSGTRVALDMTTLTIMRYLP--REVDPLVYNMSHEDPGDITYSAIGGLSEQ 102
RR L K ++VA M +T+ +L ++ P D ++++S IGGL E
Sbjct: 577 RRVLRKQPNLPDSKVA-GMVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGL-EN 634
Query: 103 IR-ELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
I+ +L++ +E PL +P+ F R+GI PPKG LLYGPPG KT++A+A+A++ NFL +
Sbjct: 635 IKLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAI 692
Score = 144 (55.7 bits), Expect = 5.2e-25, Sum P(2) = 5.2e-25
Identities = 36/90 (40%), Positives = 53/90 (58%)
Query: 426 TILFHEIPHEIG-DF-AILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G +F AI +++KY+GES R +RE+F AR P IIF DE+DA+
Sbjct: 675 TMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAV 734
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDSL 513
R S + A R L +LL +MDG + L
Sbjct: 735 ERGSS-SGAGNVADRVLAQLLTEMDGIEQL 763
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 31/91 (34%), Positives = 53/91 (58%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E+G + +I+ I+ K+ GE+ +R++F A P IIF+DE+DA+
Sbjct: 401 TMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCP 460
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDSLG 514
+R EG ++ E +R + LL MDG S G
Sbjct: 461 KR--EGAQSEVE-KRVVASLLTLMDGIGSEG 488
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 223 (83.6 bits), Expect = 6.2e-25, Sum P(2) = 6.2e-25
Identities = 41/71 (57%), Positives = 57/71 (80%)
Query: 91 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 150
+TY IGGLS Q++ +RE+IELPL PELF+ GI P+G LLYGPPGTGKT++ARAVA+
Sbjct: 350 VTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVAN 409
Query: 151 QLDANFLKVVS 161
++ A ++ V++
Sbjct: 410 EVGA-YVSVIN 419
Score = 191 (72.3 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 46/118 (38%), Positives = 70/118 (59%)
Query: 45 RRQLDKAKLKSGTRVALDMTTLTIMRYLP--REVDPLVYNMSHEDPGDITYSAIGGLSEQ 102
RR L K +VA + +T+ +L ++ P D ++++S IGGL E
Sbjct: 577 RRILKKQPNLPDVKVA-GLVKITLKDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGL-ES 634
Query: 103 IR-ELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
I+ +L + +E PL +PE F R+GI PPKG LLYGPPG KT++A+A+A++ NFL +
Sbjct: 635 IKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAI 692
Score = 140 (54.3 bits), Expect = 6.2e-25, Sum P(2) = 6.2e-25
Identities = 36/90 (40%), Positives = 51/90 (56%)
Query: 426 TILFHEIPHEIG-DF-AILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G +F AI +++KY+GES R +RE F AR P IIF DE+DA+
Sbjct: 675 TMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRKARAVAPSIIFFDELDALAV 734
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDSL 513
R S A R L +LL +MDG + L
Sbjct: 735 ERGSS-LGAGNVADRVLAQLLTEMDGIEQL 763
Score = 122 (48.0 bits), Expect = 0.00054, P = 0.00054
Identities = 30/89 (33%), Positives = 51/89 (57%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E+G + +I+ I+ K+ GE+ +R++F A P IIF+DE+DA+
Sbjct: 401 TMIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCP 460
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
+R EG + E +R + LL MDG S
Sbjct: 461 KR--EGAQNEVE-KRVVASLLTLMDGIGS 486
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 209 (78.6 bits), Expect = 6.7e-25, Sum P(2) = 6.7e-25
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 88 PGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARA 147
P ITY +GGLS+QI L+ IELPL NP LF GI+PP+G LL+GPPGTGKT+L R
Sbjct: 223 PQQITYDQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRC 282
Query: 148 VASQL-DANFLKV 159
VA+ + +A+ L +
Sbjct: 283 VANSITEAHVLTI 295
Score = 181 (68.8 bits), Expect = 9.9e-22, Sum P(2) = 9.9e-22
Identities = 45/121 (37%), Positives = 66/121 (54%)
Query: 44 CRRQLDKAKLKSGTRVALDMTTLTIM-----RYLPREVDPLVYNMSHEDPGDITYSAIGG 98
CR + KA + G V + T + + LP E+ P + + +S IGG
Sbjct: 446 CRESVMKA-INRGLTVGIPQTAIKVTVDDVYHALP-EIRPSAMREIFLEMPKVHWSDIGG 503
Query: 99 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 158
E R+L EV++LPL + F+ +G++ PKG LLYGPPG KTL A+A+A++ NFL
Sbjct: 504 QEELKRKLIEVVQLPLEASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLA 563
Query: 159 V 159
V
Sbjct: 564 V 564
Score = 153 (58.9 bits), Expect = 6.7e-25, Sum P(2) = 6.7e-25
Identities = 34/68 (50%), Positives = 42/68 (61%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
I +KY+GES R IRE+F AR P IIF DEIDAI G R +G S+ L LLN
Sbjct: 569 IFNKYVGESERAIREIFRKARAASPSIIFFDEIDAIAGDR--DGDSSTTAASNVLTSLLN 626
Query: 506 QMDGFDSL 513
++DG + L
Sbjct: 627 EIDGVEEL 634
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 38/93 (40%), Positives = 56/93 (60%)
Query: 426 TILFHEIPHEIGDFAIL-IH--AIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG 482
T+L + + I + +L I+ +IV KY+GE+ IR++FN A+ QP IIFMDEID+I
Sbjct: 277 TMLLRCVANSITEAHVLTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEIDSIA 336
Query: 483 GRRFSEGTSADREIQRTLMELLNQMDGFDSLGQ 515
R S+ S + E R + +LL MDG G+
Sbjct: 337 PSRTSDD-SGETE-SRVVAQLLTVMDGMGDNGR 367
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 219 (82.2 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 41/76 (53%), Positives = 59/76 (77%)
Query: 82 NMSHE-DPG-DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGT 139
N++ + D G +TY IGGLS Q++ +RE +ELPL ELF+ GI+PP+G LLYGPPGT
Sbjct: 304 NIAEDSDHGPQVTYDMIGGLSSQLKTIRETVELPLKRAELFKSYGISPPRGVLLYGPPGT 363
Query: 140 GKTLLARAVASQLDAN 155
GKTL+A+A+A+++ A+
Sbjct: 364 GKTLIAKAIANEVGAH 379
Score = 193 (73.0 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 46/117 (39%), Positives = 66/117 (56%)
Query: 45 RRQLDKAKLKSGTRVALDMTTLTIMRYLP--REVDPLVYNMSHEDPGDITYSAIGGLSEQ 102
RR L K S T VA + +L ++V P D +++S IGGL +
Sbjct: 542 RRALGKRAHPSDTEVA-GSVMIAFNDFLQGMKDVRPSAMREVAVDVPKVSWSDIGGLEDV 600
Query: 103 IRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
+L++ +E PL +P+ F R+GI PPKG LLYGPPG KT++A+A+A + NFL V
Sbjct: 601 KLKLKQAVEWPLKHPDSFIRMGIQPPKGVLLYGPPGCSKTMIAKALAHESGLNFLAV 657
Score = 127 (49.8 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 33/91 (36%), Positives = 52/91 (57%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ I +E+G +I+ I+ K+ GES +R++F A +P IIF+DE+DA+
Sbjct: 366 TLIAKAIANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASLRRPSIIFIDELDALCP 425
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDSLG 514
+R EG + E +R + LL MDG S G
Sbjct: 426 KR--EGAQNEVE-KRVVASLLTLMDGIGSEG 453
Score = 114 (45.2 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 426 TILFHEIPHEIG-DF-AILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + HE G +F A+ +++KY+GES R +RE+F AR P I+F DEIDA+
Sbjct: 640 TMIAKALAHESGLNFLAVKGPELMNKYVGESERAVREIFRKARMVSPSILFFDEIDALAV 699
Query: 484 RR 485
R
Sbjct: 700 ER 701
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 202 (76.2 bits), Expect = 3.1e-23, Sum P(2) = 3.1e-23
Identities = 36/78 (46%), Positives = 54/78 (69%)
Query: 82 NMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGK 141
N + P ++Y+A+GGL ++I L+ IE+PL P LF G++PP+G LL+GPPGTGK
Sbjct: 233 NRKYNLPEPLSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGK 292
Query: 142 TLLARAVASQLDANFLKV 159
T+L R VA+ +A+ L +
Sbjct: 293 TMLLRVVANTSNAHVLTI 310
Score = 172 (65.6 bits), Expect = 7.2e-20, Sum P(2) = 7.2e-20
Identities = 35/69 (50%), Positives = 48/69 (69%)
Query: 91 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 150
+ +S IGG E +++E+I+LPL E F R+GI+ PKG LLYGPPG KTL A+A+A+
Sbjct: 513 VYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALAT 572
Query: 151 QLDANFLKV 159
+ NFL V
Sbjct: 573 ESGINFLAV 581
Score = 145 (56.1 bits), Expect = 3.1e-23, Sum P(2) = 3.1e-23
Identities = 33/68 (48%), Positives = 41/68 (60%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
I +KY+GES R IRE+F AR P IIF DEIDA+ R TSA + L LLN
Sbjct: 586 IFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSAANHV---LTSLLN 642
Query: 506 QMDGFDSL 513
++DG + L
Sbjct: 643 EIDGVEEL 650
Score = 140 (54.3 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 31/71 (43%), Positives = 46/71 (64%)
Query: 445 AIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 504
+IV KY+GE+ +R++FN AR +QP IIF+DEID+I R ++ S + E R + LL
Sbjct: 314 SIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDD-SGEVE-SRVVATLL 371
Query: 505 NQMDGFDSLGQ 515
MDG + G+
Sbjct: 372 TLMDGMGAAGK 382
Score = 39 (18.8 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 376 KAKTSSQSNDDIAVAGYLNLAADF 399
K K+S+ SN A A L A+F
Sbjct: 11 KKKSSASSNSADAKASKFKLPAEF 34
Score = 38 (18.4 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 6/25 (24%), Positives = 14/25 (56%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGL 99
E+D + N +++D G++ + L
Sbjct: 346 EIDSIAPNRANDDSGEVESRVVATL 370
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 218 (81.8 bits), Expect = 8.1e-23, Sum P(2) = 8.1e-23
Identities = 41/82 (50%), Positives = 60/82 (73%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
E +P V E D+ Y +GG+ +Q+ ++RE++ELPL +P+LF+ +G+ PPKG LLY
Sbjct: 189 EGEP-VKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLY 247
Query: 135 GPPGTGKTLLARAVASQLDANF 156
GPPG+GKTL+ARAVA++ A F
Sbjct: 248 GPPGSGKTLIARAVANETGAFF 269
Score = 195 (73.7 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 34/70 (48%), Positives = 53/70 (75%)
Query: 90 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 149
+++++ IGGL REL+E ++ P+ +PE F++ G++P KG L YGPPG GKTLLA+A+A
Sbjct: 476 NVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 535
Query: 150 SQLDANFLKV 159
++ ANF+ V
Sbjct: 536 NECQANFISV 545
Score = 124 (48.7 bits), Expect = 8.1e-23, Sum P(2) = 8.1e-23
Identities = 33/89 (37%), Positives = 50/89 (56%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G F I+ I+ K GES +R+ F A + P IIF+DEID+I
Sbjct: 255 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 314
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
+R E T+ + E +R + +LL MDG S
Sbjct: 315 KR--EKTNGEVE-RRIVSQLLTLMDGLKS 340
Score = 119 (46.9 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS-EGTSADREIQRTLMELL 504
++ + GES +RE+F+ AR PC++F DE+D+I +R G R L +LL
Sbjct: 550 LLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLL 609
Query: 505 NQMDGFDS 512
+MDG ++
Sbjct: 610 TEMDGMNA 617
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 218 (81.8 bits), Expect = 8.9e-23, Sum P(2) = 8.9e-23
Identities = 48/129 (37%), Positives = 76/129 (58%)
Query: 32 RETTNGPRYVV-GCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGD 90
R G +VV G RQ++ + + TI+ + E +P+ + +
Sbjct: 154 RPVRKGDHFVVRGGMRQVEFKVVDVEPEEYAVVAQDTIIHW---EGEPINREDEENNMNE 210
Query: 91 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 150
+ Y IGG +Q+ ++RE++ELPL +P+LF+ +GI PP+G L+YGPPGTGKTL+ARAVA+
Sbjct: 211 VGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVAN 270
Query: 151 QLDANFLKV 159
+ A F +
Sbjct: 271 ETGAFFFLI 279
Score = 209 (78.6 bits), Expect = 9.0e-20, Sum P(2) = 9.0e-20
Identities = 42/112 (37%), Positives = 71/112 (63%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 107
LD+ ++ + +L +T + R+ +P + + ++T+ +GGL E EL+
Sbjct: 442 LDEDEIDAEVLDSLGVT-MDNFRFALGNSNPSALRETVVESVNVTWDDVGGLDEIKEELK 500
Query: 108 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
E +E P+L+P+ + + G++P KG L YGPPGTGKTLLA+AVA+++ ANF+ V
Sbjct: 501 ETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISV 552
Score = 124 (48.7 bits), Expect = 8.9e-23, Sum P(2) = 8.9e-23
Identities = 31/86 (36%), Positives = 50/86 (58%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G F LI+ ++ K GES +R+ F A + P IIF+DEID+I
Sbjct: 262 TLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAP 321
Query: 484 RRFSEGTSADREIQRTLMELLNQMDG 509
+R + T+ + E +R + +LL MDG
Sbjct: 322 KR--DKTNGEVE-RRVVSQLLTLMDG 344
Score = 105 (42.0 bits), Expect = 8.5e-21, Sum P(2) = 8.5e-21
Identities = 26/89 (29%), Positives = 46/89 (51%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + E+ I + ++ + GES IR++F+ AR P ++F+DE+D+I
Sbjct: 535 TLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAK 594
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
R A R + +LL +MDG ++
Sbjct: 595 ARGGSLGDAGGASDRVVNQLLTEMDGMNA 623
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 214 (80.4 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 40/82 (48%), Positives = 60/82 (73%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
E +P V E ++ Y +GG+ +Q+ ++RE++ELPL +P+LF+ +G+ PPKG LLY
Sbjct: 189 EGEP-VKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLY 247
Query: 135 GPPGTGKTLLARAVASQLDANF 156
GPPG+GKTL+ARAVA++ A F
Sbjct: 248 GPPGSGKTLIARAVANETGAFF 269
Score = 194 (73.4 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 34/70 (48%), Positives = 52/70 (74%)
Query: 90 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 149
++++ IGGL REL+E ++ P+ +PE F++ G++P KG L YGPPG GKTLLA+A+A
Sbjct: 476 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 535
Query: 150 SQLDANFLKV 159
++ ANF+ V
Sbjct: 536 NECQANFISV 545
Score = 127 (49.8 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ + GES +RE+F+ AR PC++F DE+D+I +R + A R L +LL
Sbjct: 550 LLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLT 609
Query: 506 QMDGFDS 512
+MDG ++
Sbjct: 610 EMDGMNA 616
Score = 124 (48.7 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 33/89 (37%), Positives = 50/89 (56%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G F I+ I+ K GES +R+ F A + P IIF+DEID+I
Sbjct: 255 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 314
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
+R E T+ + E +R + +LL MDG S
Sbjct: 315 KR--EKTNGEVE-RRIVSQLLTLMDGLKS 340
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 221 (82.9 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 40/85 (47%), Positives = 61/85 (71%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
E +P+ + + ++ Y IGG +Q+ ++RE++ELPL +P+LF+ +GI PP+G LLY
Sbjct: 203 EGEPIQRDEEENNLNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLY 262
Query: 135 GPPGTGKTLLARAVASQLDANFLKV 159
GPPGTGKTL+ARAVA++ A F +
Sbjct: 263 GPPGTGKTLMARAVANETGAFFFLI 287
Score = 188 (71.2 bits), Expect = 8.8e-19, Sum P(2) = 8.8e-19
Identities = 34/70 (48%), Positives = 52/70 (74%)
Query: 90 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 149
++ + IGGL E ++LRE ++ P+ +PE F + G++P +G L YGPPGTGKT+LA+AVA
Sbjct: 492 NVRWEDIGGLDEVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVA 551
Query: 150 SQLDANFLKV 159
++ ANF+ V
Sbjct: 552 NECAANFISV 561
Score = 129 (50.5 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 33/86 (38%), Positives = 50/86 (58%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G F LI+ I+ K GES +R+ F A + P IIF+DEID+I
Sbjct: 270 TLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAP 329
Query: 484 RRFSEGTSADREIQRTLMELLNQMDG 509
+R E T+ + E +R + +LL MDG
Sbjct: 330 KR--EKTNGEVE-RRVVSQLLTLMDG 352
Score = 118 (46.6 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ + GES IR++F+ AR PCI+F+DE+D+I R A R + +LL
Sbjct: 566 LLSMWFGESESNIRDIFDKARAAAPCIVFLDELDSIAKARGGSVGDAGGASDRVVNQLLT 625
Query: 506 QMDGFDS 512
+MDG S
Sbjct: 626 EMDGMTS 632
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 213 (80.0 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 36/67 (53%), Positives = 55/67 (82%)
Query: 90 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 149
++ Y +GG+ +Q+ ++RE++ELPL +P+LF+ +G+ PPKG LLYGPPG+GKTL+ARAVA
Sbjct: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
Query: 150 SQLDANF 156
++ A F
Sbjct: 264 NETGAFF 270
Score = 193 (73.0 bits), Expect = 5.6e-20, Sum P(2) = 5.6e-20
Identities = 33/70 (47%), Positives = 52/70 (74%)
Query: 90 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 149
++++ IGGL REL+E ++ P+ +PE F++ G++P KG L YGPPG GKTLLA+A+A
Sbjct: 477 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
Query: 150 SQLDANFLKV 159
++ ANF+ +
Sbjct: 537 NECQANFISI 546
Score = 124 (48.7 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ + GES +RE+F+ AR PC++F DE+D+I +R + A R L +LL
Sbjct: 551 LLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLT 610
Query: 506 QMDGFDS 512
+MDG ++
Sbjct: 611 EMDGMNA 617
Score = 122 (48.0 bits), Expect = 0.00048, P = 0.00048
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G F I+ I+ K GES +R+ F A + P IIF+DEID+I
Sbjct: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
+R E T + E +R + +LL MDG S
Sbjct: 316 KR--EKTHGEVE-RRIVSQLLTLMDGLKS 341
>UNIPROTKB|P63345 [details] [associations]
symbol:mpa "Proteasome-associated ATPase" species:1773
"Mycobacterium tuberculosis" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005618 "cell wall" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0010498 "proteasomal protein catabolic process"
evidence=IDA;IMP] [GO:0010499 "proteasomal ubiquitin-independent
protein catabolic process" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0019941 "modification-dependent protein
catabolic process" evidence=IDA;IMP] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0032182 "small conjugating protein binding" evidence=IDA;IPI]
[GO:0043335 "protein unfolding" evidence=IDA] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0051409 "response to
nitrosative stress" evidence=IMP] [GO:0070628 "proteasome binding"
evidence=IPI] [GO:0071732 "cellular response to nitric oxide"
evidence=IMP] HAMAP:MF_02112 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR022482 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0009405 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0051260 EMBL:BX842578 GO:GO:0016887
GO:GO:0071732 GO:GO:0051409 eggNOG:COG0464 EMBL:DQ888314 PIR:F70512
RefSeq:NP_216631.1 RefSeq:NP_336644.1 RefSeq:YP_006515531.1
PDB:3FP9 PDB:3M91 PDB:3M9B PDB:3M9D PDB:3M9H PDBsum:3FP9
PDBsum:3M91 PDBsum:3M9B PDBsum:3M9D PDBsum:3M9H
ProteinModelPortal:P63345 SMR:P63345 DIP:DIP-48292N
MINT:MINT-7262409 PRIDE:P63345 EnsemblBacteria:EBMYCT00000003259
EnsemblBacteria:EBMYCT00000070852 GeneID:13316922 GeneID:887297
GeneID:923659 KEGG:mtc:MT2175 KEGG:mtu:Rv2115c KEGG:mtv:RVBD_2115c
PATRIC:18126540 TubercuList:Rv2115c HOGENOM:HOG000245286 KO:K13527
OMA:VFFDEME ProtClustDB:CLSK872012 UniPathway:UPA00997
EvolutionaryTrace:P63345 GO:GO:0022623 GO:GO:0032182 GO:GO:0019941
GO:GO:0010499 GO:GO:0043335 PANTHER:PTHR23073:SF4
TIGRFAMs:TIGR03689 Uniprot:P63345
Length = 609
Score = 223 (83.6 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 47/109 (43%), Positives = 69/109 (63%)
Query: 52 KLKSGTRVALDMTTLTIMRYLPR-EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVI 110
KL+ G + +D +P+ EV+ LV E+ D++Y+ IGGLS QI ++R+ +
Sbjct: 213 KLRPGDSLLVDTKAGYAFERIPKAEVEDLVL----EEVPDVSYADIGGLSRQIEQIRDAV 268
Query: 111 ELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
ELP L+ EL++ + PPKG LLYGPPG GKTL+A+AVA+ L +V
Sbjct: 269 ELPFLHKELYREYSLRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEV 317
Score = 108 (43.1 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 28/87 (32%), Positives = 51/87 (58%)
Query: 434 HEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQ----PCIIFMDEIDAIGGRRFS 487
HE + + I +++K++GE+ R IR +F AR+ P I+F DE+D+I R
Sbjct: 323 HEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTR-- 380
Query: 488 EGTSADREIQRTLM-ELLNQMDGFDSL 513
GT +++ T++ +LL+++DG + L
Sbjct: 381 -GTGVSSDVETTVVPQLLSEIDGVEGL 406
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 219 (82.2 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 39/85 (45%), Positives = 60/85 (70%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
E +P+ E ++ Y IGG+ +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 135 GPPGTGKTLLARAVASQLDANFLKV 159
GPPGTGKTL+ARAVA++ A F +
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLI 269
Score = 207 (77.9 bits), Expect = 9.7e-21, Sum P(2) = 9.7e-21
Identities = 44/119 (36%), Positives = 73/119 (61%)
Query: 45 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 100
R+++D L+ T A M +L + R+ + +P + + +IT+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWEDIGGLD 483
Query: 101 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 542
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G F LI+ I+ K GES +R+ F A + P IIF+DE+DAI
Sbjct: 252 TLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAP 311
Query: 484 RRFSEGTSADREIQRTLMELLNQMDG 509
+R E T + E +R + +LL MDG
Sbjct: 312 KR--EKTHGEVE-RRIVSQLLTLMDG 334
Score = 116 (45.9 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 27/71 (38%), Positives = 41/71 (57%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLM 501
++ + GES +RE+F+ AR PC++F DE+D+I GG G +ADR I
Sbjct: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVIN---- 602
Query: 502 ELLNQMDGFDS 512
++L +MDG S
Sbjct: 603 QILTEMDGMSS 613
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 221 (82.9 bits), Expect = 5.1e-22, Sum P(2) = 5.1e-22
Identities = 41/85 (48%), Positives = 59/85 (69%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
E +P+ E DI Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 187 EGEPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 246
Query: 135 GPPGTGKTLLARAVASQLDANFLKV 159
GPPGTGKTL+ARAVA++ A F +
Sbjct: 247 GPPGTGKTLVARAVANETGAFFFLI 271
Score = 192 (72.6 bits), Expect = 9.8e-19, Sum P(2) = 9.8e-19
Identities = 54/166 (32%), Positives = 84/166 (50%)
Query: 10 RHKTLQDYRK--KLTEHAEVEGRLRETTN--GPRYVVGCRRQLDKAKLKSGTRVAL--DM 63
R + LQ + K KL+E ++E ET G C +A K T + L D
Sbjct: 379 RLEILQIHTKNMKLSEDVDLEQISAETHGHVGADLAALCSEAALQAIRKKMTLIDLEDDS 438
Query: 64 TTLTIMRYLPREVDPLVYNMSHEDPG----------DITYSAIGGLSEQIRELREVIELP 113
++ L +D + +S +P + + IGGL E REL+E+++ P
Sbjct: 439 IDADLLNSLAVTMDDFKWALSQSNPSALRETVVEVPHVNWEDIGGLDEVKRELQELVQYP 498
Query: 114 LLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
+ P+ F + G+TP +G L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 499 VEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQANFVSI 544
Score = 125 (49.1 bits), Expect = 0.00022, P = 0.00022
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G F LI+ I+ K GES +R+ F A + P IIF+DE+DAI
Sbjct: 254 TLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAP 313
Query: 484 RRFSEGTSADREIQRTLMELLNQMDG 509
+R E T + E +R + +LL MDG
Sbjct: 314 KR--EKTHGEVE-RRIVSQLLTLMDG 336
Score = 113 (44.8 bits), Expect = 5.1e-22, Sum P(2) = 5.1e-22
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ + GES +R++F+ AR PCI+F DE+D+I R A R + ++L
Sbjct: 549 LLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGGGAGDAGGAADRVINQILT 608
Query: 506 QMDG 509
+MDG
Sbjct: 609 EMDG 612
>UNIPROTKB|H7C475 [details] [associations]
symbol:ATAD2B "ATPase family AAA domain-containing protein
2B" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
EMBL:AC009242 EMBL:AC066692 EMBL:AC079924 HGNC:HGNC:29230
ProteinModelPortal:H7C475 Ensembl:ENST00000366438 Uniprot:H7C475
Length = 155
Score = 202 (76.2 bits), Expect = 5.4e-22, Sum P(2) = 5.4e-22
Identities = 40/85 (47%), Positives = 57/85 (67%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
+VDP+ + S + + +IGGLS I L+E++ PLL PE+F++ I PP+GCL Y
Sbjct: 9 DVDPMNIDKS------VRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFY 62
Query: 135 GPPGTGKTLLARAVASQLDANFLKV 159
GPPGTGKTL+ARA+A++ KV
Sbjct: 63 GPPGTGKTLVARALANECSQGDKKV 87
Score = 82 (33.9 bits), Expect = 5.4e-22, Sum P(2) = 5.4e-22
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 487
+ K++GES R +R +F+ A +P IIF DEID + R S
Sbjct: 98 LSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVRSS 138
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 217 (81.4 bits), Expect = 5.9e-22, Sum P(2) = 5.9e-22
Identities = 39/85 (45%), Positives = 60/85 (70%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
E +P+ + ++ Y IGG +Q+ ++RE++ELPL +P+LF+ +GI PP+G L+Y
Sbjct: 206 EGEPIQREDEENNLNEVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMY 265
Query: 135 GPPGTGKTLLARAVASQLDANFLKV 159
GPPGTGKTL+ARAVA++ A F +
Sbjct: 266 GPPGTGKTLMARAVANETGAFFFLI 290
Score = 194 (73.4 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 36/70 (51%), Positives = 52/70 (74%)
Query: 90 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 149
++ + IGGL E REL E ++ P+ +PE FQ+ G++P +G L YGPPGTGKT+LA+AVA
Sbjct: 495 NVRWEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVA 554
Query: 150 SQLDANFLKV 159
++ ANF+ V
Sbjct: 555 NECAANFISV 564
Score = 129 (50.5 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 33/86 (38%), Positives = 50/86 (58%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G F LI+ I+ K GES +R+ F A + P IIF+DEID+I
Sbjct: 273 TLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAP 332
Query: 484 RRFSEGTSADREIQRTLMELLNQMDG 509
+R E T+ + E +R + +LL MDG
Sbjct: 333 KR--EKTNGEVE-RRVVSQLLTLMDG 355
Score = 117 (46.2 bits), Expect = 5.9e-22, Sum P(2) = 5.9e-22
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ + GES IR++F+ AR PC++F+DE+D+I R A R + +LL
Sbjct: 569 LLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLT 628
Query: 506 QMDGFDS 512
+MDG S
Sbjct: 629 EMDGMTS 635
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 207 (77.9 bits), Expect = 6.2e-22, Sum P(2) = 6.2e-22
Identities = 38/81 (46%), Positives = 58/81 (71%)
Query: 84 SHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTL 143
+ E P DI+ S IGGL + I EL E++ +P+ +PE++Q GI PP+G LL+GPPG GKT+
Sbjct: 164 NREPPSDISLSDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTM 223
Query: 144 LARAVASQLDANFLKVVSRTI 164
LA A+A++L F+ + + +I
Sbjct: 224 LANALANELGVPFISISAPSI 244
Score = 176 (67.0 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 38/73 (52%), Positives = 53/73 (72%)
Query: 88 PGDITYSAIGGLSEQIR-ELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLAR 146
PG ++++ IG L + IR EL+ I P+ PEL+Q VGI+ P G LL+GPPG GKTLLA+
Sbjct: 487 PG-VSWNNIGAL-KSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAK 544
Query: 147 AVASQLDANFLKV 159
AVA++ ANF+ +
Sbjct: 545 AVANESKANFISI 557
Score = 127 (49.8 bits), Expect = 6.2e-22, Sum P(2) = 6.2e-22
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+++KY+GES R +R++F AR PC+IF DE+DA+ RR + A + TL L
Sbjct: 562 LLNKYVGESERAVRQVFLRARASSPCVIFFDELDAMVPRRDDSLSEASSRVVNTL---LT 618
Query: 506 QMDG 509
++DG
Sbjct: 619 ELDG 622
Score = 123 (48.4 bits), Expect = 0.00035, P = 0.00035
Identities = 33/86 (38%), Positives = 52/86 (60%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + + +E+G I I A IV GES + +RE+F A+ PC++F+DEIDA+
Sbjct: 222 TMLANALANELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTP 281
Query: 484 RRFSEGTSADREIQRTLM-ELLNQMD 508
+R SA RE++R ++ + L MD
Sbjct: 282 KR----ESAQREMERRIVAQFLTCMD 303
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 222 (83.2 bits), Expect = 8.2e-22, Sum P(2) = 8.2e-22
Identities = 40/93 (43%), Positives = 65/93 (69%)
Query: 67 TIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGIT 126
T++ Y E DP+ E ++ Y +GG+ +Q+ +++E++ELPL +P+LF+ +G+
Sbjct: 185 TVIHY---EGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVK 241
Query: 127 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
PP+G LL+GPPGTGKTL+ARAVA++ A F +
Sbjct: 242 PPRGILLFGPPGTGKTLIARAVANETGAFFFLI 274
Score = 188 (71.2 bits), Expect = 5.8e-18, Sum P(2) = 5.8e-18
Identities = 35/74 (47%), Positives = 53/74 (71%)
Query: 86 EDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLA 145
E P + T+S IGGL REL+E+++ P+ +PE + + G+ P +G L YGPPG GKTLLA
Sbjct: 475 ETP-NTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLA 533
Query: 146 RAVASQLDANFLKV 159
+A+A++ ANF+ +
Sbjct: 534 KAIANECQANFISI 547
Score = 110 (43.8 bits), Expect = 8.2e-22, Sum P(2) = 8.2e-22
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ + GES +R++F+ AR PC++F DE+D+I R A R + ++L
Sbjct: 552 LLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLT 611
Query: 506 QMDGFDS 512
+MDG ++
Sbjct: 612 EMDGMNA 618
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 222 (83.2 bits), Expect = 8.2e-22, Sum P(2) = 8.2e-22
Identities = 40/93 (43%), Positives = 65/93 (69%)
Query: 67 TIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGIT 126
T++ Y E DP+ E ++ Y +GG+ +Q+ +++E++ELPL +P+LF+ +G+
Sbjct: 185 TVIHY---EGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVK 241
Query: 127 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
PP+G LL+GPPGTGKTL+ARAVA++ A F +
Sbjct: 242 PPRGILLFGPPGTGKTLIARAVANETGAFFFLI 274
Score = 188 (71.2 bits), Expect = 5.8e-18, Sum P(2) = 5.8e-18
Identities = 35/74 (47%), Positives = 53/74 (71%)
Query: 86 EDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLA 145
E P + T+S IGGL REL+E+++ P+ +PE + + G+ P +G L YGPPG GKTLLA
Sbjct: 475 ETP-NTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLA 533
Query: 146 RAVASQLDANFLKV 159
+A+A++ ANF+ +
Sbjct: 534 KAIANECQANFISI 547
Score = 110 (43.8 bits), Expect = 8.2e-22, Sum P(2) = 8.2e-22
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ + GES +R++F+ AR PC++F DE+D+I R A R + ++L
Sbjct: 552 LLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLT 611
Query: 506 QMDGFDS 512
+MDG ++
Sbjct: 612 EMDGMNA 618
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 226 (84.6 bits), Expect = 9.4e-22, Sum P(2) = 9.4e-22
Identities = 42/93 (45%), Positives = 65/93 (69%)
Query: 67 TIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGIT 126
T++ Y E DP+ E DI Y +GG+ +Q+ +++E++ELPL +P+LF+ +GI
Sbjct: 186 TMIHY---EGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIK 242
Query: 127 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
PP+G LL+GPPGTGKTL+ARAVA++ + F +
Sbjct: 243 PPRGILLFGPPGTGKTLIARAVANETGSFFFLI 275
Score = 189 (71.6 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 36/95 (37%), Positives = 59/95 (62%)
Query: 65 TLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVG 124
T+ R+ + P + + + T+S IGGL REL+E+++ P+ +PE + + G
Sbjct: 454 TMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFG 513
Query: 125 ITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
+ P +G L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 514 MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISI 548
Score = 130 (50.8 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 32/86 (37%), Positives = 50/86 (58%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G F LI+ ++ K GES +R+ F +QP I+F+DEIDAI
Sbjct: 258 TLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAP 317
Query: 484 RRFSEGTSADREIQRTLMELLNQMDG 509
+R E T+ + E +R + +LL MDG
Sbjct: 318 KR--EKTNGEVE-RRIVSQLLTLMDG 340
Score = 105 (42.0 bits), Expect = 9.4e-22, Sum P(2) = 9.4e-22
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG-GRRFSEGTSADREIQRTLMELL 504
++ + GES +R++F+ AR PC++F DE+D+I R G R + ++L
Sbjct: 553 LLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVL 612
Query: 505 NQMDGFDS 512
+MDG ++
Sbjct: 613 TEMDGMNA 620
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 226 (84.6 bits), Expect = 9.4e-22, Sum P(2) = 9.4e-22
Identities = 42/93 (45%), Positives = 65/93 (69%)
Query: 67 TIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGIT 126
T++ Y E DP+ E DI Y +GG+ +Q+ +++E++ELPL +P+LF+ +GI
Sbjct: 186 TMIHY---EGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIK 242
Query: 127 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
PP+G LL+GPPGTGKTL+ARAVA++ + F +
Sbjct: 243 PPRGILLFGPPGTGKTLIARAVANETGSFFFLI 275
Score = 189 (71.6 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 36/95 (37%), Positives = 59/95 (62%)
Query: 65 TLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVG 124
T+ R+ + P + + + T+S IGGL REL+E+++ P+ +PE + + G
Sbjct: 454 TMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFG 513
Query: 125 ITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
+ P +G L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 514 MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISI 548
Score = 130 (50.8 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 32/86 (37%), Positives = 50/86 (58%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G F LI+ ++ K GES +R+ F +QP I+F+DEIDAI
Sbjct: 258 TLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAP 317
Query: 484 RRFSEGTSADREIQRTLMELLNQMDG 509
+R E T+ + E +R + +LL MDG
Sbjct: 318 KR--EKTNGEVE-RRIVSQLLTLMDG 340
Score = 105 (42.0 bits), Expect = 9.4e-22, Sum P(2) = 9.4e-22
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG-GRRFSEGTSADREIQRTLMELL 504
++ + GES +R++F+ AR PC++F DE+D+I R G R + ++L
Sbjct: 553 LLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVL 612
Query: 505 NQMDGFDS 512
+MDG ++
Sbjct: 613 TEMDGMNA 620
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 214 (80.4 bits), Expect = 9.9e-22, Sum P(2) = 9.9e-22
Identities = 39/85 (45%), Positives = 58/85 (68%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
E +P+ ++ Y IGG Q+ ++RE++ELPL +P+LF+ +GI PP+G L+Y
Sbjct: 205 EGEPINREDEESSLAEVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMY 264
Query: 135 GPPGTGKTLLARAVASQLDANFLKV 159
GPPGTGKTL+ARAVA++ A F +
Sbjct: 265 GPPGTGKTLMARAVANETGAFFFLI 289
Score = 206 (77.6 bits), Expect = 8.0e-21, Sum P(2) = 8.0e-21
Identities = 43/112 (38%), Positives = 69/112 (61%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 107
LD+ ++ + +L +T + R+ +P + + ++ + IGGL E RELR
Sbjct: 452 LDEDEIDAEVLDSLGVT-MDNFRFALGSSNPSALRETVVEVPNVRWEDIGGLEEVKRELR 510
Query: 108 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
E +++P++ E F R G+TP KG L +GPPGTGKTLLA+A+A++ ANF+ V
Sbjct: 511 ETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISV 562
Score = 129 (50.5 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 33/86 (38%), Positives = 50/86 (58%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G F LI+ I+ K GES +R+ F A + P IIF+DEID+I
Sbjct: 272 TLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAP 331
Query: 484 RRFSEGTSADREIQRTLMELLNQMDG 509
+R E T+ + E +R + +LL MDG
Sbjct: 332 KR--EKTNGEVE-RRVVSQLLTLMDG 354
Score = 118 (46.6 bits), Expect = 9.9e-22, Sum P(2) = 9.9e-22
Identities = 30/90 (33%), Positives = 50/90 (55%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG- 482
T+L I +E I + ++ + GES +R++F+ AR PC++F+DE+D+I
Sbjct: 545 TLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAK 604
Query: 483 GRRFSEGTSADREIQRTLMELLNQMDGFDS 512
R S G S + R + +LL +MDG +S
Sbjct: 605 ARGASAGDSGGGD--RVVNQLLTEMDGVNS 632
>UNIPROTKB|A2AAT0 [details] [associations]
symbol:SLC39A7 "Zinc transporter SLC39A7" species:9606
"Homo sapiens" [GO:0016020 "membrane" evidence=IEA] [GO:0046873
"metal ion transmembrane transporter activity" evidence=IEA]
InterPro:IPR003689 Pfam:PF02535 GO:GO:0016020 GO:GO:0046873
EMBL:AL645940 EMBL:AL662824 EMBL:AL844527 EMBL:CR759733
EMBL:CR936877 eggNOG:COG0428 EMBL:CR759786 EMBL:CR847841
EMBL:CR354565 HGNC:HGNC:4927 ChiTaRS:SLC39A7 OrthoDB:EOG46DM3M
IPI:IPI00790832 Ensembl:ENST00000414757 Ensembl:ENST00000414916
Ensembl:ENST00000425069 Ensembl:ENST00000429042
Ensembl:ENST00000444757 Ensembl:ENST00000454420 Uniprot:A2AAT0
Length = 220
Score = 240 (89.5 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 52/113 (46%), Positives = 68/113 (60%)
Query: 229 ALLSTILISLAPFLILFVVPLDT-ATGNENFLKVXXXXXXXXXXXDAFLHLIPHAIGAXX 287
AL +T+LIS APF +LF++P+++ + + + L++ DAFLHLIPHA+
Sbjct: 48 ALGATVLISAAPFFVLFLIPVESNSPRHRSLLQILLSFASGGLLGDAFLHLIPHALEPHS 107
Query: 288 XXXXXXXXXXXXXXXXXIADLSVGLWVLFGILAFLCVEKFVRYVKGGHGHSHG 340
LSVGLWVL GI+AFL VEKFVR+VKGGHGHSHG
Sbjct: 108 HHTLEQPGHGHSHSGQGPI-LSVGLWVLSGIVAFLVVEKFVRHVKGGHGHSHG 159
Score = 38 (18.4 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 330 YVKGGHGHSHGKPIEKKKHT 349
+ +G HGH + K+K +
Sbjct: 166 HTRGSHGHGRQERSTKEKQS 185
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 212 (79.7 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 36/70 (51%), Positives = 55/70 (78%)
Query: 90 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 149
++ Y IGG+ +Q+ ++RE++ELPL +P+LF+ +G+ PPKG LLYGPPG GKT++ARAVA
Sbjct: 198 EVGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVA 257
Query: 150 SQLDANFLKV 159
++ A F +
Sbjct: 258 NETGAFFFLI 267
Score = 192 (72.6 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 92 TYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQ 151
T+ IGGL RELRE ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A++
Sbjct: 473 TWEDIGGLEGVKRELRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANE 532
Query: 152 LDANFLKV 159
ANF+ +
Sbjct: 533 CQANFISI 540
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 34/89 (38%), Positives = 50/89 (56%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G F LI+ I+ K GES +R+ F A + P IIF+DEID+I
Sbjct: 250 TMIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 309
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
+R E T + E +R + +LL MDG S
Sbjct: 310 KR--EKTQGEVE-RRIVSQLLTLMDGLKS 335
Score = 119 (46.9 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ + GES +RE+F+ AR PC++F DE+D+I R S A R + ++L
Sbjct: 545 LLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARSRGSSQGDAGGAGDRVINQILT 604
Query: 506 QMDGFDS 512
+MDG ++
Sbjct: 605 EMDGMNA 611
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 217 (81.4 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 135 GPPGTGKTLLARAVASQLDANFLKV 159
GPPGTGKTL+ARAVA++ A F +
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLI 269
Score = 205 (77.2 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 45 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 100
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 422 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 481
Query: 101 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 482 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 540
Score = 113 (44.8 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLM 501
++ + GES +RE+F+ AR PC++F DE+D+I GG G +ADR I
Sbjct: 545 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN---- 600
Query: 502 ELLNQMDGFDS 512
++L +MDG +
Sbjct: 601 QILTEMDGMST 611
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 217 (81.4 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 135 GPPGTGKTLLARAVASQLDANFLKV 159
GPPGTGKTL+ARAVA++ A F +
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLI 269
Score = 205 (77.2 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 45 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 100
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 101 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 542
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G F LI+ I+ K GES +R+ F A + P IIF+DE+DAI
Sbjct: 252 TLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAP 311
Query: 484 RRFSEGTSADREIQRTLMELLNQMDG 509
+R E T + E +R + +LL MDG
Sbjct: 312 KR--EKTHGEVE-RRIVSQLLTLMDG 334
Score = 113 (44.8 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLM 501
++ + GES +RE+F+ AR PC++F DE+D+I GG G +ADR I
Sbjct: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN---- 602
Query: 502 ELLNQMDGFDS 512
++L +MDG +
Sbjct: 603 QILTEMDGMST 613
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 217 (81.4 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 135 GPPGTGKTLLARAVASQLDANFLKV 159
GPPGTGKTL+ARAVA++ A F +
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLI 269
Score = 205 (77.2 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 45 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 100
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 101 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 542
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G F LI+ I+ K GES +R+ F A + P IIF+DE+DAI
Sbjct: 252 TLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAP 311
Query: 484 RRFSEGTSADREIQRTLMELLNQMDG 509
+R E T + E +R + +LL MDG
Sbjct: 312 KR--EKTHGEVE-RRIVSQLLTLMDG 334
Score = 113 (44.8 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLM 501
++ + GES +RE+F+ AR PC++F DE+D+I GG G +ADR I
Sbjct: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN---- 602
Query: 502 ELLNQMDGFDS 512
++L +MDG +
Sbjct: 603 QILTEMDGMST 613
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 217 (81.4 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 135 GPPGTGKTLLARAVASQLDANFLKV 159
GPPGTGKTL+ARAVA++ A F +
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLI 269
Score = 205 (77.2 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 45 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 100
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 101 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 542
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G F LI+ I+ K GES +R+ F A + P IIF+DE+DAI
Sbjct: 252 TLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAP 311
Query: 484 RRFSEGTSADREIQRTLMELLNQMDG 509
+R E T + E +R + +LL MDG
Sbjct: 312 KR--EKTHGEVE-RRIVSQLLTLMDG 334
Score = 113 (44.8 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLM 501
++ + GES +RE+F+ AR PC++F DE+D+I GG G +ADR I
Sbjct: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN---- 602
Query: 502 ELLNQMDGFDS 512
++L +MDG +
Sbjct: 603 QILTEMDGMST 613
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 217 (81.4 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 135 GPPGTGKTLLARAVASQLDANFLKV 159
GPPGTGKTL+ARAVA++ A F +
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLI 269
Score = 205 (77.2 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 45 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 100
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 101 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 542
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G F LI+ I+ K GES +R+ F A + P IIF+DE+DAI
Sbjct: 252 TLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAP 311
Query: 484 RRFSEGTSADREIQRTLMELLNQMDG 509
+R E T + E +R + +LL MDG
Sbjct: 312 KR--EKTHGEVE-RRIVSQLLTLMDG 334
Score = 113 (44.8 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLM 501
++ + GES +RE+F+ AR PC++F DE+D+I GG G +ADR I
Sbjct: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN---- 602
Query: 502 ELLNQMDGFDS 512
++L +MDG +
Sbjct: 603 QILTEMDGMST 613
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 217 (81.4 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 135 GPPGTGKTLLARAVASQLDANFLKV 159
GPPGTGKTL+ARAVA++ A F +
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLI 269
Score = 205 (77.2 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 45 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 100
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 101 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 542
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G F LI+ I+ K GES +R+ F A + P IIF+DE+DAI
Sbjct: 252 TLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAP 311
Query: 484 RRFSEGTSADREIQRTLMELLNQMDG 509
+R E T + E +R + +LL MDG
Sbjct: 312 KR--EKTHGEVE-RRIVSQLLTLMDG 334
Score = 113 (44.8 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLM 501
++ + GES +RE+F+ AR PC++F DE+D+I GG G +ADR I
Sbjct: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN---- 602
Query: 502 ELLNQMDGFDS 512
++L +MDG +
Sbjct: 603 QILTEMDGMST 613
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 217 (81.4 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 135 GPPGTGKTLLARAVASQLDANFLKV 159
GPPGTGKTL+ARAVA++ A F +
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLI 269
Score = 205 (77.2 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 45 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 100
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 101 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 542
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G F LI+ I+ K GES +R+ F A + P IIF+DE+DAI
Sbjct: 252 TLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAP 311
Query: 484 RRFSEGTSADREIQRTLMELLNQMDG 509
+R E T + E +R + +LL MDG
Sbjct: 312 KR--EKTHGEVE-RRIVSQLLTLMDG 334
Score = 113 (44.8 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLM 501
++ + GES +RE+F+ AR PC++F DE+D+I GG G +ADR I
Sbjct: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN---- 602
Query: 502 ELLNQMDGFDS 512
++L +MDG +
Sbjct: 603 QILTEMDGMST 613
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 217 (81.4 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 135 GPPGTGKTLLARAVASQLDANFLKV 159
GPPGTGKTL+ARAVA++ A F +
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLI 269
Score = 202 (76.2 bits), Expect = 7.4e-20, Sum P(2) = 7.4e-20
Identities = 42/119 (35%), Positives = 72/119 (60%)
Query: 45 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 100
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 101 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
+ REL+++++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 542
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G F LI+ I+ K GES +R+ F A + P IIF+DE+DAI
Sbjct: 252 TLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAP 311
Query: 484 RRFSEGTSADREIQRTLMELLNQMDG 509
+R E T + E +R + +LL MDG
Sbjct: 312 KR--EKTHGEVE-RRIVSQLLTLMDG 334
Score = 113 (44.8 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLM 501
++ + GES +RE+F+ AR PC++F DE+D+I GG G +ADR I
Sbjct: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN---- 602
Query: 502 ELLNQMDGFDS 512
++L +MDG +
Sbjct: 603 QILTEMDGMST 613
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 217 (81.4 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 135 GPPGTGKTLLARAVASQLDANFLKV 159
GPPGTGKTL+ARAVA++ A F +
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLI 269
Score = 205 (77.2 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 45 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 100
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 101 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 542
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G F LI+ I+ K GES +R+ F A + P IIF+DE+DAI
Sbjct: 252 TLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAP 311
Query: 484 RRFSEGTSADREIQRTLMELLNQMDG 509
+R E T + E +R + +LL MDG
Sbjct: 312 KR--EKTHGEVE-RRIVSQLLTLMDG 334
Score = 113 (44.8 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLM 501
++ + GES +RE+F+ AR PC++F DE+D+I GG G +ADR I
Sbjct: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN---- 602
Query: 502 ELLNQMDGFDS 512
++L +MDG +
Sbjct: 603 QILTEMDGMST 613
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 217 (81.4 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 135 GPPGTGKTLLARAVASQLDANFLKV 159
GPPGTGKTL+ARAVA++ A F +
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLI 269
Score = 205 (77.2 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 45 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 100
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 428 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 487
Query: 101 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 488 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 546
Score = 113 (44.8 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLM 501
++ + GES +RE+F+ AR PC++F DE+D+I GG G +ADR I
Sbjct: 551 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN---- 606
Query: 502 ELLNQMDGFDS 512
++L +MDG +
Sbjct: 607 QILTEMDGMST 617
>UNIPROTKB|E9PNN7 [details] [associations]
symbol:SLC39A13 "Zinc transporter ZIP13" species:9606 "Homo
sapiens" [GO:0016020 "membrane" evidence=IEA] [GO:0046873 "metal
ion transmembrane transporter activity" evidence=IEA]
InterPro:IPR003689 Pfam:PF02535 GO:GO:0016020 GO:GO:0046873
EMBL:AC090559 HGNC:HGNC:20859 IPI:IPI00975896
Ensembl:ENST00000531865 ArrayExpress:E9PNN7 Bgee:E9PNN7
Uniprot:E9PNN7
Length = 259
Score = 197 (74.4 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 37/69 (53%), Positives = 50/69 (72%)
Query: 389 VAGYLNLAADFTHNFTDGLAIGASYLAGKHVGIVTTITILFHEIPHEIGDFAILIHAIVD 448
V+GYLNL A+ NFT GLA+ AS+L K +G++TT+ IL HEIPHE+GDFAIL+ A D
Sbjct: 180 VSGYLNLLANTIDNFTHGLAVAASFLVSKKIGLLTTMAILLHEIPHEVGDFAILLRAGFD 239
Query: 449 KYIGESARL 457
++ +L
Sbjct: 240 RWSAAKLQL 248
Score = 83 (34.3 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 29/109 (26%), Positives = 43/109 (39%)
Query: 223 LQVWGEALLSTILISLAPFLILFVVPLDTATGNENF-----LKVXXXXXXXXXXXDAFLH 277
L W +LL ++++ L+ L V+PL+ T + LK + FLH
Sbjct: 65 LDTWICSLLGSLMVGLSGVFPLLVIPLEMGTMLRSEAGAWRLKQLLSFALGGLLGNVFLH 124
Query: 278 LIPHAIGAXXXXXXXXXXXXXXXXXXXIADLSVGLWVLFGILAFLCVEK 326
L+P A +GLWV+ GIL FL +EK
Sbjct: 125 LLPEAWAYTCSASPGGEGQSLQQQQ------QLGLWVIAGILTFLALEK 167
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 217 (81.4 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 201 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 260
Query: 135 GPPGTGKTLLARAVASQLDANFLKV 159
GPPGTGKTL+ARAVA++ A F +
Sbjct: 261 GPPGTGKTLIARAVANETGAFFFLI 285
Score = 205 (77.2 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 45 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 100
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 440 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 499
Query: 101 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 500 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 558
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G F LI+ I+ K GES +R+ F A + P IIF+DE+DAI
Sbjct: 268 TLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAP 327
Query: 484 RRFSEGTSADREIQRTLMELLNQMDG 509
+R E T + E +R + +LL MDG
Sbjct: 328 KR--EKTHGEVE-RRIVSQLLTLMDG 350
Score = 113 (44.8 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLM 501
++ + GES +RE+F+ AR PC++F DE+D+I GG G +ADR I
Sbjct: 563 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN---- 618
Query: 502 ELLNQMDGFDS 512
++L +MDG +
Sbjct: 619 QILTEMDGMST 629
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 217 (81.4 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 135 GPPGTGKTLLARAVASQLDANFLKV 159
GPPGTGKTL+ARAVA++ A F +
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLI 269
Score = 205 (77.2 bits), Expect = 4.3e-20, Sum P(2) = 4.3e-20
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 45 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 100
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 101 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 542
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T++ + +E G F LI+ I+ K GES +R+ F A + P IIF+DE+DAI
Sbjct: 252 TLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAP 311
Query: 484 RRFSEGTSADREIQRTLMELLNQMDG 509
+R E T + E +R + +LL MDG
Sbjct: 312 KR--EKTHGEVE-RRIVSQLLTLMDG 334
Score = 112 (44.5 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 26/68 (38%), Positives = 40/68 (58%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLM 501
++ + GES +RE+F+ AR PC++F DE+D+I GG G +ADR I
Sbjct: 547 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN---- 602
Query: 502 ELLNQMDG 509
++L +MDG
Sbjct: 603 QILTEMDG 610
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 189 (71.6 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 34/70 (48%), Positives = 50/70 (71%)
Query: 90 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 149
++ + +IGGL Q++++RE+I+L +L + G+ PPKG LLYGPPGTGKTLLAR VA
Sbjct: 308 NLNFQSIGGLDLQVKQIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTLLARIVA 367
Query: 150 SQLDANFLKV 159
+Q +A +
Sbjct: 368 TQTNATLFTI 377
Score = 175 (66.7 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 37/70 (52%), Positives = 49/70 (70%)
Query: 91 ITYSAIGGLSEQIRE-LREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 149
+ + IGG E I++ L+E IE PL P+ F R+GI PPKG LLYGPPG KTLLA+A+A
Sbjct: 619 VFWGDIGG-QEHIKQKLKEAIEWPLKYPQSFIRMGIKPPKGILLYGPPGCSKTLLAKALA 677
Query: 150 SQLDANFLKV 159
++ NF+ V
Sbjct: 678 TESGLNFIAV 687
Score = 142 (55.0 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 33/90 (36%), Positives = 53/90 (58%)
Query: 426 TILFHEIPHEIG-DF-AILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + E G +F A+ ++ K++GES R +R++F AR + P I+F DEID +
Sbjct: 670 TLLAKALATESGLNFIAVKGPELLSKWVGESERAVRDIFKKARQNSPSILFFDEIDGLAI 729
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDSL 513
R EG+ A ++R + +LL +MDG L
Sbjct: 730 SRSGEGSGA---VERVVSQLLTEMDGIQPL 756
Score = 100 (40.3 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
I+DK+ G + + ++++F A P IIF+DE+DA+ +R E S++ E +R + LL
Sbjct: 382 ILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALCPKR--EDNSSEVE-KRIVGSLLT 438
Query: 506 QMDG 509
MDG
Sbjct: 439 LMDG 442
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 215 (80.7 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 38/83 (45%), Positives = 57/83 (68%)
Query: 77 DPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGP 136
DP+ E + Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G L+YGP
Sbjct: 184 DPIKREEEEESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGP 243
Query: 137 PGTGKTLLARAVASQLDANFLKV 159
PGTGKTL+ARAVA++ A F +
Sbjct: 244 PGTGKTLIARAVANETGAFFFLI 266
Score = 188 (71.2 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 39/112 (34%), Positives = 67/112 (59%)
Query: 48 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 107
L+ K+ + +L +T + RY + P + + + T++ IGGL +EL+
Sbjct: 429 LEDDKIDAEVLASLAVT-MENFRYAMTKSSPSALRETVVEVPNTTWTDIGGLESVKKELQ 487
Query: 108 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
E+++ P+ +P+ F + G+ P +G L YGPPG GKTLLA+A+A++ ANF+ V
Sbjct: 488 ELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISV 539
Score = 111 (44.1 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ + GES +R++F+ AR PC++F DE+D+I R A R + ++L
Sbjct: 544 LLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILT 603
Query: 506 QMDG 509
+MDG
Sbjct: 604 EMDG 607
Score = 37 (18.1 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 33 ETTNGPRY--VVGCRRQLDKAK 52
E+ N Y + GCR+QL + K
Sbjct: 193 ESLNAVGYDDIGGCRKQLAQIK 214
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 217 (81.4 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
E +P+ ++ Y IGG +Q+ ++RE++ELPL +P+LF+ +GI PPKG L+Y
Sbjct: 196 EGEPINREDEENSLNEVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMY 255
Query: 135 GPPGTGKTLLARAVASQLDANFLKV 159
GPPGTGKT++ARAVA++ A F +
Sbjct: 256 GPPGTGKTIMARAVANETGAFFFLI 280
Score = 205 (77.2 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 36/70 (51%), Positives = 53/70 (75%)
Query: 90 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 149
++T+ IGGL EL+E +E P+L+P+ +Q+ G+ P KG L +GPPGTGKTLLA+AVA
Sbjct: 484 NVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVA 543
Query: 150 SQLDANFLKV 159
+++ ANF+ V
Sbjct: 544 TEVSANFISV 553
Score = 127 (49.8 bits), Expect = 0.00014, P = 0.00014
Identities = 33/86 (38%), Positives = 50/86 (58%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
TI+ + +E G F LI+ I+ K GES +R+ F A + P IIF+DEID+I
Sbjct: 263 TIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAP 322
Query: 484 RRFSEGTSADREIQRTLMELLNQMDG 509
+R + T+ + E +R + +LL MDG
Sbjct: 323 KR--DKTNGEVE-RRVVSQLLTLMDG 345
Score = 107 (42.7 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 26/89 (29%), Positives = 46/89 (51%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + E+ I + ++ + GES IR++F+ AR P ++F+DE+D+I
Sbjct: 536 TLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAK 595
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
R A R + +LL +MDG ++
Sbjct: 596 ARGGSHGDAGGASDRVVNQLLTEMDGMNA 624
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 217 (81.4 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
E +P+ ++ Y IGG +Q+ ++RE++ELPL +P+LF+ +GI PPKG L+Y
Sbjct: 196 EGEPINREDEENSLNEVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMY 255
Query: 135 GPPGTGKTLLARAVASQLDANFLKV 159
GPPGTGKT++ARAVA++ A F +
Sbjct: 256 GPPGTGKTIMARAVANETGAFFFLI 280
Score = 205 (77.2 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 36/70 (51%), Positives = 53/70 (75%)
Query: 90 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 149
++T+ IGGL EL+E +E P+L+P+ +Q+ G+ P KG L +GPPGTGKTLLA+AVA
Sbjct: 484 NVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVA 543
Query: 150 SQLDANFLKV 159
+++ ANF+ V
Sbjct: 544 TEVSANFISV 553
Score = 127 (49.8 bits), Expect = 0.00014, P = 0.00014
Identities = 33/86 (38%), Positives = 50/86 (58%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
TI+ + +E G F LI+ I+ K GES +R+ F A + P IIF+DEID+I
Sbjct: 263 TIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAP 322
Query: 484 RRFSEGTSADREIQRTLMELLNQMDG 509
+R + T+ + E +R + +LL MDG
Sbjct: 323 KR--DKTNGEVE-RRVVSQLLTLMDG 345
Score = 107 (42.7 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 26/89 (29%), Positives = 46/89 (51%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T+L + E+ I + ++ + GES IR++F+ AR P ++F+DE+D+I
Sbjct: 536 TLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAK 595
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDS 512
R A R + +LL +MDG ++
Sbjct: 596 ARGGSHGDAGGASDRVVNQLLTEMDGMNA 624
>UNIPROTKB|O50202 [details] [associations]
symbol:arc "Proteasome-associated ATPase" species:1833
"Rhodococcus erythropolis" [GO:0000502 "proteasome complex"
evidence=IGC] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGC] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0022623 "proteasome-activating nucleotidase complex"
evidence=IGC] [GO:0043273 "CTPase activity" evidence=IDA]
HAMAP:MF_02112 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR022482 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016887 GO:GO:0010498
UniPathway:UPA00997 GO:GO:0022623 GO:GO:0019941
PANTHER:PTHR23073:SF4 TIGRFAMs:TIGR03689 EMBL:AF088800 PDB:2WFW
PDBsum:2WFW ProteinModelPortal:O50202 EvolutionaryTrace:O50202
GO:GO:0043273 Uniprot:O50202
Length = 591
Score = 213 (80.0 bits), Expect = 7.8e-21, Sum P(2) = 7.8e-21
Identities = 45/102 (44%), Positives = 63/102 (61%)
Query: 52 KLKSGTRVALDMTTLTIMRYLPR-EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVI 110
KL+ G + +D +P+ EV+ LV E+ D+ Y IGGL QI ++R+ +
Sbjct: 195 KLRPGDSLLVDTKAGYAFERIPKAEVEDLVL----EEVPDVHYDDIGGLGRQIEQIRDAV 250
Query: 111 ELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL 152
ELP L+ +LF + PPKG LLYGPPG GKTL+A+AVA+ L
Sbjct: 251 ELPFLHKDLFHEYSLRPPKGVLLYGPPGCGKTLIAKAVANSL 292
Score = 106 (42.4 bits), Expect = 7.8e-21, Sum P(2) = 7.8e-21
Identities = 27/73 (36%), Positives = 48/73 (65%)
Query: 446 IVDKYIGESARLIREMFNYARDHQ----PCIIFMDEIDAIGGRRFSEGTSADREIQRTLM 501
+++K++GE+ R IR +F AR+ P I+F DE+D+I R S G S+D ++ T++
Sbjct: 319 LLNKFVGETERHIRMIFQRAREKASEGTPVIVFFDEMDSIFRTRGS-GVSSD--VETTVV 375
Query: 502 -ELLNQMDGFDSL 513
+LL+++DG + L
Sbjct: 376 PQLLSEIDGVEGL 388
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 209 (78.6 bits), Expect = 7.9e-21, Sum P(2) = 7.9e-21
Identities = 43/93 (46%), Positives = 63/93 (67%)
Query: 67 TIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGIT 126
T++ Y E DP+ + E +I Y IGG +Q+ ++RE+IELPL +P LF+ +G+
Sbjct: 184 TVIYY---EGDPIKRD-DEEKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVK 239
Query: 127 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
PP+G LLYGPPG+GKT +ARAVA++ A F +
Sbjct: 240 PPRGVLLYGPPGSGKTCIARAVANETGAFFFLI 272
Score = 182 (69.1 bits), Expect = 8.8e-18, Sum P(2) = 8.8e-18
Identities = 34/70 (48%), Positives = 50/70 (71%)
Query: 90 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 149
++ + IGGL E LRE+I P+ +P+ F++ G++P +G L YGPPG GKTLLA+AVA
Sbjct: 476 NVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVA 535
Query: 150 SQLDANFLKV 159
S+ ANF+ +
Sbjct: 536 SECSANFVSI 545
Score = 133 (51.9 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 34/92 (36%), Positives = 51/92 (55%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T + + +E G F LI+ ++ K GE+ +R F A + P IIF+DEID+I
Sbjct: 255 TCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAP 314
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDSLGQ 515
+R E T+ + E +R + +LL MDG S GQ
Sbjct: 315 KR--EKTNGEVE-RRVVSQLLTLMDGIKSRGQ 343
Score = 115 (45.5 bits), Expect = 7.9e-21, Sum P(2) = 7.9e-21
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ + GES +RE+F+ AR PC++F DE+D+IG +R S R + +LL
Sbjct: 550 LLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLT 609
Query: 506 QMDG 509
++DG
Sbjct: 610 EIDG 613
Score = 38 (18.4 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 16/73 (21%), Positives = 33/73 (45%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL- 504
I+DK + ES + ++ FN A + + + ++ + D E++ TL E++
Sbjct: 439 IIDKEVLESMCVTQDHFNMALGTCNPSSLRETVVEVPNVKWDDIGGLD-EVKSTLREMIL 497
Query: 505 ---NQMDGFDSLG 514
+ D F+ G
Sbjct: 498 YPIDHPDKFEKFG 510
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 209 (78.6 bits), Expect = 7.9e-21, Sum P(2) = 7.9e-21
Identities = 43/93 (46%), Positives = 63/93 (67%)
Query: 67 TIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGIT 126
T++ Y E DP+ + E +I Y IGG +Q+ ++RE+IELPL +P LF+ +G+
Sbjct: 184 TVIYY---EGDPIKRD-DEEKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVK 239
Query: 127 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
PP+G LLYGPPG+GKT +ARAVA++ A F +
Sbjct: 240 PPRGVLLYGPPGSGKTCIARAVANETGAFFFLI 272
Score = 182 (69.1 bits), Expect = 8.8e-18, Sum P(2) = 8.8e-18
Identities = 34/70 (48%), Positives = 50/70 (71%)
Query: 90 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 149
++ + IGGL E LRE+I P+ +P+ F++ G++P +G L YGPPG GKTLLA+AVA
Sbjct: 476 NVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVA 535
Query: 150 SQLDANFLKV 159
S+ ANF+ +
Sbjct: 536 SECSANFVSI 545
Score = 133 (51.9 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 34/92 (36%), Positives = 51/92 (55%)
Query: 426 TILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 483
T + + +E G F LI+ ++ K GE+ +R F A + P IIF+DEID+I
Sbjct: 255 TCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAP 314
Query: 484 RRFSEGTSADREIQRTLMELLNQMDGFDSLGQ 515
+R E T+ + E +R + +LL MDG S GQ
Sbjct: 315 KR--EKTNGEVE-RRVVSQLLTLMDGIKSRGQ 343
Score = 115 (45.5 bits), Expect = 7.9e-21, Sum P(2) = 7.9e-21
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ + GES +RE+F+ AR PC++F DE+D+IG +R S R + +LL
Sbjct: 550 LLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLT 609
Query: 506 QMDG 509
++DG
Sbjct: 610 EIDG 613
Score = 38 (18.4 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 16/73 (21%), Positives = 33/73 (45%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL- 504
I+DK + ES + ++ FN A + + + ++ + D E++ TL E++
Sbjct: 439 IIDKEVLESMCVTQDHFNMALGTCNPSSLRETVVEVPNVKWDDIGGLD-EVKSTLREMIL 497
Query: 505 ---NQMDGFDSLG 514
+ D F+ G
Sbjct: 498 YPIDHPDKFEKFG 510
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 177 (67.4 bits), Expect = 8.2e-21, Sum P(2) = 8.2e-21
Identities = 32/70 (45%), Positives = 51/70 (72%)
Query: 90 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 149
++ +S IGG SE +++ IE PLL+ + FQR+GI PP+G L++GPPG KT++A+A+A
Sbjct: 531 NVQWSDIGGQSELRLAMQQAIEWPLLHADKFQRLGIKPPRGILMFGPPGCSKTMIAKALA 590
Query: 150 SQLDANFLKV 159
++ NFL +
Sbjct: 591 TESKLNFLSI 600
Score = 149 (57.5 bits), Expect = 8.2e-21, Sum P(2) = 8.2e-21
Identities = 30/66 (45%), Positives = 45/66 (68%)
Query: 450 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS-EGTSADREI-QRTLMELLNQM 507
++GES R +RE+F AR P I+F DEIDAIGG R +G+S+ + +R L +LL ++
Sbjct: 609 WVGESERAVREVFRKARQVAPAIVFFDEIDAIGGERSEGDGSSSGSSVKERVLTQLLTEL 668
Query: 508 DGFDSL 513
DG ++L
Sbjct: 669 DGVEAL 674
Score = 78 (32.5 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 91 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 150
IT IGGL Q++ + E +E L L G+ +G LLYG G GK+++ A+ +
Sbjct: 269 ITKCQIGGLDRQLQLVEESMEYALGFRTL--PAGLRVSRGLLLYGATGCGKSMVLEAMCA 326
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 205 (77.2 bits), Expect = 8.4e-21, Sum P(2) = 8.4e-21
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 45 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 100
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 156 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 215
Query: 101 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 216 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 274
Score = 113 (44.8 bits), Expect = 8.4e-21, Sum P(2) = 8.4e-21
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLM 501
++ + GES +RE+F+ AR PC++F DE+D+I GG G +ADR I
Sbjct: 279 LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN---- 334
Query: 502 ELLNQMDGFDS 512
++L +MDG +
Sbjct: 335 QILTEMDGMST 345
>SGD|S000003502 [details] [associations]
symbol:YTA7 "Protein that localizes to chromatin and
regulates histone expression" species:4932 "Saccharomyces
cerevisiae" [GO:0042393 "histone binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0031936 "negative regulation of chromatin silencing"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IMP;IDA]
[GO:0042406 "extrinsic to endoplasmic reticulum membrane"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 SGD:S000003502
GO:GO:0005524 GO:GO:0005634 EMBL:BK006941 GO:GO:0045944
GO:GO:0003682 GO:GO:0000122 GO:GO:0031936 eggNOG:COG0464
GO:GO:0017111 GO:GO:0042393 GO:GO:0042406 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 EMBL:Y07893 EMBL:X81072
GeneTree:ENSGT00550000074694 EMBL:Z73055 PIR:S64603
RefSeq:NP_011786.1 ProteinModelPortal:P40340 SMR:P40340
DIP:DIP-6557N IntAct:P40340 MINT:MINT-629064 STRING:P40340
PaxDb:P40340 EnsemblFungi:YGR270W GeneID:853186 KEGG:sce:YGR270W
CYGD:YGR270w HOGENOM:HOG000157282 OMA:YPELYQN OrthoDB:EOG473T0K
NextBio:973329 Genevestigator:P40340 GermOnline:YGR270W
Uniprot:P40340
Length = 1379
Score = 197 (74.4 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 39/85 (45%), Positives = 58/85 (68%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
++DPL +M+ + + IGGL I +L+E++ LPLL PEL+Q ITPP+G L +
Sbjct: 400 DLDPLGVDMN------VNFDDIGGLDNYIDQLKEMVALPLLYPELYQNFNITPPRGVLFH 453
Query: 135 GPPGTGKTLLARAVASQLDANFLKV 159
GPPGTGKTL+ARA+A+ ++ K+
Sbjct: 454 GPPGTGKTLMARALAASCSSDERKI 478
Score = 132 (51.5 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 30/70 (42%), Positives = 41/70 (58%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
I+ K++GE+ R +R +F A+ HQP IIF DEID + R S+ I TL+ L
Sbjct: 488 ILSKWVGEAERQLRLLFEEAKKHQPSIIFFDEIDGLAPVRSSKQEQIHASIVSTLLAL-- 545
Query: 506 QMDGFDSLGQ 515
MDG D+ GQ
Sbjct: 546 -MDGMDNRGQ 554
Score = 45 (20.9 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 451 IGESARLIR----EMFNYARDHQPCIIFMDEID 479
+ ES+R I + F A+ QP ++F+ +D
Sbjct: 807 VSESSRTIEAAVVQSFMEAKKRQPSVVFIPNLD 839
Score = 40 (19.1 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 82 NMSHEDPGDITYSAIGGLSEQIRELRE 108
N ++D D + + L+++IREL+E
Sbjct: 231 NEENDDENDNSRNEALTLADEIRELQE 257
>UNIPROTKB|F1NUE7 [details] [associations]
symbol:F1NUE7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00550000074694 OMA:WNISAGQ
EMBL:AADN02018482 IPI:IPI00579829 Ensembl:ENSGALT00000026612
Uniprot:F1NUE7
Length = 487
Score = 206 (77.6 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 40/85 (47%), Positives = 58/85 (68%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
+VDP++ + S + + +IGGLS I L+E++ PLL PE+F++ I PP+GCL Y
Sbjct: 300 DVDPMIVDKS------VRFDSIGGLSHHILALKEMVVFPLLYPEIFEKFKIQPPRGCLFY 353
Query: 135 GPPGTGKTLLARAVASQLDANFLKV 159
GPPGTGKTL+ARA+A++ KV
Sbjct: 354 GPPGTGKTLVARALANECSQGDKKV 378
Score = 108 (43.1 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 27/69 (39%), Positives = 38/69 (55%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 506
+ K++GES R +R +F+ A +P IIF DEID + R S I TL+ L
Sbjct: 389 LSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLAL--- 445
Query: 507 MDGFDSLGQ 515
MDG D+ G+
Sbjct: 446 MDGLDNRGE 454
>UNIPROTKB|D4A9R0 [details] [associations]
symbol:LOC500625 "Protein LOC500625" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00550000074694 IPI:IPI00471839
Ensembl:ENSRNOT00000052041 RGD:1566199 ArrayExpress:D4A9R0
Uniprot:D4A9R0
Length = 419
Score = 202 (76.2 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 40/85 (47%), Positives = 57/85 (67%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
+VDP+ + S + + +IGGLS I L+E++ PLL PE+F++ I PP+GCL Y
Sbjct: 226 DVDPMNIDKS------VRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFY 279
Query: 135 GPPGTGKTLLARAVASQLDANFLKV 159
GPPGTGKTL+ARA+A++ KV
Sbjct: 280 GPPGTGKTLVARALANECSQGDKKV 304
Score = 108 (43.1 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 27/69 (39%), Positives = 38/69 (55%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 506
+ K++GES R +R +F+ A +P IIF DEID + R S I TL+ L
Sbjct: 315 LSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLAL--- 371
Query: 507 MDGFDSLGQ 515
MDG D+ G+
Sbjct: 372 MDGLDNRGE 380
>ASPGD|ASPL0000064393 [details] [associations]
symbol:AN7673 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005385 "zinc ion transmembrane transporter
activity" evidence=IEA] [GO:0006829 "zinc ion transport"
evidence=IEA] InterPro:IPR003689 Pfam:PF02535 GO:GO:0016020
EMBL:BN001304 EMBL:AACD01000130 GO:GO:0046873 eggNOG:COG0428
KO:K14713 HOGENOM:HOG000185308 OMA:FTHNITD OrthoDB:EOG422DV8
RefSeq:XP_680942.1 EnsemblFungi:CADANIAT00000800 GeneID:2869340
KEGG:ani:AN7673.2 Uniprot:Q5AVK7
Length = 424
Score = 262 (97.3 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 69/237 (29%), Positives = 103/237 (43%)
Query: 229 ALLSTILISLAPFLILFVVPLDTATGNENFLKVXXXXXXXXXXXDAFLHLIPHA-IGAXX 287
ALL+T+ IS P +L + P + + + L V D HL+P +G
Sbjct: 87 ALLATVYISGPPNFLLALCPPNI---DPSSLSVMVAFAVGGLLGDTLFHLLPEIFLGEDS 143
Query: 288 XXXXXXXXXXXXXXXXXIADLSVGLWVLFGILAFLCVEKFVRYVKGGHGHSHGKPIEKKK 347
+L +GL ++ G F+ ++K +R GG GH H
Sbjct: 144 PDHVRFVMVEPNR------NLLLGLGIMVGFFTFVAMDKALRIATGGEGHDHSHSHSHSH 197
Query: 348 HTXXXXXXXXXXXXXXXXXXXYKKTKR----VKAKTSSQS--NDDIAVAGYLNLAADFTH 401
+KT + SS++ N + + GYLNL ADFTH
Sbjct: 198 SAPETAVATGASTTSSNTKLKQRKTAGSHPDIPDTDSSKNEINPSVKLGGYLNLIADFTH 257
Query: 402 NFTDGLAIGASYLAGKHVGIVTTITILFHEIPHEIGDFAILIHAIVDKYIGESARLI 458
N TDGLA+ +S+ A +G TT+ + FHEIPHE+GDFA+LI + K A+ +
Sbjct: 258 NITDGLAMSSSFYASPTIGATTTVAVFFHEIPHEVGDFALLIQSGFSKRKAMGAQFV 314
>UNIPROTKB|G3V4X1 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AL161662
HGNC:HGNC:9547 EMBL:AL355074 ProteinModelPortal:G3V4X1 SMR:G3V4X1
Ensembl:ENST00000553835 ArrayExpress:G3V4X1 Bgee:G3V4X1
Uniprot:G3V4X1
Length = 84
Score = 245 (91.3 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 47/82 (57%), Positives = 60/82 (73%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
+ DPLV M E TY+ IGGL QI+E++E +ELPL +PE ++ +GI PPKG +LY
Sbjct: 3 DTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILY 62
Query: 135 GPPGTGKTLLARAVASQLDANF 156
GPPGTGKTLLA+AVA+Q A F
Sbjct: 63 GPPGTGKTLLAKAVANQTSATF 84
>CGD|CAL0002985 [details] [associations]
symbol:orf19.3949 species:5476 "Candida albicans" [GO:0042406
"extrinsic to endoplasmic reticulum membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0031936
"negative regulation of chromatin silencing" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 CGD:CAL0002985
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AACQ01000012 EMBL:AACQ01000011
RefSeq:XP_721858.1 RefSeq:XP_722018.1 ProteinModelPortal:Q5AK72
STRING:Q5AK72 GeneID:3636302 GeneID:3636397 KEGG:cal:CaO19.11431
KEGG:cal:CaO19.3949 Uniprot:Q5AK72
Length = 1314
Score = 202 (76.2 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 40/85 (47%), Positives = 57/85 (67%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
+ DPL +M+ I +S +GGL I +L+E++ LPLL PEL+Q ITPP+G L +
Sbjct: 387 DTDPLGVDMN------IDFSVVGGLDNYINQLKEMVALPLLYPELYQNFAITPPRGVLFH 440
Query: 135 GPPGTGKTLLARAVASQLDANFLKV 159
GPPGTGKTL+ARA+A+ + K+
Sbjct: 441 GPPGTGKTLMARALAASCSTSERKI 465
Score = 122 (48.0 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 28/69 (40%), Positives = 40/69 (57%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 506
+ K++GE+ R +R +F A++ QP IIF DEID + R S+ I TL+ L
Sbjct: 476 LSKWVGEAERQLRLLFEEAKNQQPSIIFFDEIDGLAPVRSSKQEQIHASIVSTLLAL--- 532
Query: 507 MDGFDSLGQ 515
MDG D+ GQ
Sbjct: 533 MDGMDNRGQ 541
Score = 52 (23.4 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 458 IREMFNYARDHQPCIIFMDEID 479
I + F AR HQP I+F+ ID
Sbjct: 795 IVQAFIEARRHQPAILFIPNID 816
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 186 (70.5 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 39/119 (32%), Positives = 68/119 (57%)
Query: 46 RQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRE 105
+Q D +L G + + T ++ R++D + P +I S++GG+ +
Sbjct: 153 QQADTTELLKGNKRKAKGSAKTQLKKQKRKID-------YSTP-NIDLSSLGGVESVTTQ 204
Query: 106 LREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTI 164
L E+I LP+L+PE++ G+ PP+G LLYGPPG GKT +A A+A +L F+ + + ++
Sbjct: 205 LLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANALAGELKVPFINISAPSV 263
Score = 171 (65.3 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 39/99 (39%), Positives = 55/99 (55%)
Query: 61 LDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELF 120
L +T + LP V P D+T+ +G L + EL I P+ PEL+
Sbjct: 490 LAITYQDFVNALP-SVQPSAKREGFATIPDVTWQNVGALFKIRMELHMCIVQPIKKPELY 548
Query: 121 QRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
+VGI P G L++GPPG GKTLLA+AVA++ ANF+ +
Sbjct: 549 LKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISI 587
Score = 134 (52.2 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+++KY+GES + +R++F AR PCIIF DE+DA+ RR TS R + LL
Sbjct: 592 LLNKYVGESEKAVRQVFQRARASTPCIIFFDELDALVPRR---DTSMSESSSRVVNTLLT 648
Query: 506 QMDGFD 511
++DG +
Sbjct: 649 ELDGLN 654
Score = 120 (47.3 bits), Expect = 9.3e-19, Sum P(2) = 9.3e-19
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 445 AIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM-EL 503
++V GES + +RE+F A+ PC+IFMDEIDAI +R +G A RE+++ ++ +L
Sbjct: 262 SVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITPKR--DG-GAQREMEKRIVAQL 318
Query: 504 LNQMD 508
L MD
Sbjct: 319 LTLMD 323
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 186 (70.5 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 39/119 (32%), Positives = 68/119 (57%)
Query: 46 RQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRE 105
+Q D +L G + + T ++ R++D + P +I S++GG+ +
Sbjct: 153 QQADTTELLKGNKRKAKGSAKTQLKKQKRKID-------YSTP-NIDLSSLGGVESVTTQ 204
Query: 106 LREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTI 164
L E+I LP+L+PE++ G+ PP+G LLYGPPG GKT +A A+A +L F+ + + ++
Sbjct: 205 LLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANALAGELKVPFINISAPSV 263
Score = 171 (65.3 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 39/99 (39%), Positives = 55/99 (55%)
Query: 61 LDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELF 120
L +T + LP V P D+T+ +G L + EL I P+ PEL+
Sbjct: 490 LAITYQDFVNALP-SVQPSAKREGFATIPDVTWQNVGALFKIRMELHMCIVQPIKKPELY 548
Query: 121 QRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
+VGI P G L++GPPG GKTLLA+AVA++ ANF+ +
Sbjct: 549 LKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISI 587
Score = 134 (52.2 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+++KY+GES + +R++F AR PCIIF DE+DA+ RR TS R + LL
Sbjct: 592 LLNKYVGESEKAVRQVFQRARASTPCIIFFDELDALVPRR---DTSMSESSSRVVNTLLT 648
Query: 506 QMDGFD 511
++DG +
Sbjct: 649 ELDGLN 654
Score = 120 (47.3 bits), Expect = 9.3e-19, Sum P(2) = 9.3e-19
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 445 AIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM-EL 503
++V GES + +RE+F A+ PC+IFMDEIDAI +R +G A RE+++ ++ +L
Sbjct: 262 SVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITPKR--DG-GAQREMEKRIVAQL 318
Query: 504 LNQMD 508
L MD
Sbjct: 319 LTLMD 323
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 180 (68.4 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 86 EDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLA 145
E+ ++++ IGGL + ELR+ IE P L E F++ G++PPKG +LYGPPG KT L
Sbjct: 562 ENISNVSWDDIGGLDDIKEELRQAIEWPNLYKESFEKFGLSPPKGIILYGPPGCSKTTLV 621
Query: 146 RAVASQLDANFLKVVSRTI 164
+AVAS +FL + TI
Sbjct: 622 KAVASSSKLSFLSLSGATI 640
Score = 166 (63.5 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 96 IGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDAN 155
IGGL+EQI+ L E++ P+L P++F+ + I PPKG LL GPPGTGKT L R V D
Sbjct: 289 IGGLNEQIKLLEEMMIYPILFPQVFKTLNIDPPKGILLKGPPGTGKTHLVRTVCDAYDIE 348
Query: 156 FLKV 159
+ +
Sbjct: 349 MISI 352
Score = 140 (54.3 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 30/69 (43%), Positives = 41/69 (59%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR-FSEGTSADREIQRTLMELL 504
I Y+G+S + IR++F AR P I+F DEIDAI +R S+ +S D R L L
Sbjct: 640 IFSPYLGDSEQTIRDIFKKARQTTPSILFFDEIDAIVSKRNLSDNSSGDNAQSRVLSTFL 699
Query: 505 NQMDGFDSL 513
N+MDG + L
Sbjct: 700 NEMDGVEQL 708
Score = 74 (31.1 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 23/70 (32%), Positives = 35/70 (50%)
Query: 446 IVDKYIGESARLIREMFNYARD------HQPCIIFMDEIDAIGGRRFSEGTSADREIQRT 499
I YIGE+ +R +F A D + P ++F+DEID I R S+ T + R
Sbjct: 357 ISGSYIGETEENLRNIFQEASDKSIAKSNSPIVVFIDEIDTICPPR-SKSTQNE---SRV 412
Query: 500 LMELLNQMDG 509
+ + L +DG
Sbjct: 413 VGQFLTLLDG 422
>UNIPROTKB|I3LI39 [details] [associations]
symbol:I3LI39 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00570000078874
Ensembl:ENSSSCT00000029727 OMA:QARECAP Uniprot:I3LI39
Length = 160
Score = 146 (56.5 bits), Expect = 5.2e-20, Sum P(2) = 5.2e-20
Identities = 30/75 (40%), Positives = 48/75 (64%)
Query: 91 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGI-TPPKGCLLYGPPGTGKTLLARAVA 149
+ + I G + L+E++ LP L PELF G+ P +G LL+GPPG GKT+LA+AVA
Sbjct: 11 VKFDDIAGQELAKQALQEIVILPSLRPELF--TGLRAPARGLLLFGPPGNGKTMLAKAVA 68
Query: 150 SQLDANFLKVVSRTI 164
++ +A F + + ++
Sbjct: 69 AESNATFFNISAASL 83
Score = 122 (48.0 bits), Expect = 5.2e-20, Sum P(2) = 5.2e-20
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 439 FAILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQR 498
F I ++ KY+GE +L+R +F AR+ QP IIF+DE+D++ R A R ++
Sbjct: 76 FNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLRERREGEHDASRRLKT 135
Query: 499 TLMELLNQMDGFDSLG 514
E L + DG S G
Sbjct: 136 ---EFLIEFDGVQSAG 148
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 181 (68.8 bits), Expect = 9.6e-20, Sum P(2) = 9.6e-20
Identities = 40/106 (37%), Positives = 62/106 (58%)
Query: 55 SGTRVAL-DMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELP 113
SG +++L + ++ LP + P D+T++ +G L EL I P
Sbjct: 494 SGEQLSLLSIKYEDFLKALPT-IQPTAKREGFATVPDVTWANVGALQRVRLELNMAIVQP 552
Query: 114 LLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
+ PEL+++VGI+ P G LL+GPPG GKTLLA+AVA++ ANF+ +
Sbjct: 553 IKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISI 598
Score = 180 (68.4 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 30/77 (38%), Positives = 53/77 (68%)
Query: 88 PGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARA 147
P + + ++GG+ + + +L E+I LP+L+PE+F G+ PP+G LL+GPPG GKT +A A
Sbjct: 199 PPNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANA 258
Query: 148 VASQLDANFLKVVSRTI 164
+A +L F+ + + ++
Sbjct: 259 LAGELQVPFISISAPSV 275
Score = 135 (52.6 bits), Expect = 9.6e-20, Sum P(2) = 9.6e-20
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+++KY+GES R IR++F AR PC+IF DE+DA+ RR TS R + LL
Sbjct: 603 LLNKYVGESERSIRQVFTRARASVPCVIFFDELDALVPRR---DTSLSESSSRVVNTLLT 659
Query: 506 QMDGFD 511
++DG +
Sbjct: 660 ELDGLN 665
Score = 123 (48.4 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 445 AIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM-EL 503
++V GES + IR++F+ AR PC++F DEIDAI +R +G A RE++R ++ +L
Sbjct: 274 SVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKR--DG-GAQREMERRIVAQL 330
Query: 504 LNQMD 508
L MD
Sbjct: 331 LTSMD 335
>UNIPROTKB|J3QRR3 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AC015651
ChiTaRS:PSMC5 HGNC:HGNC:9552 Ensembl:ENST00000584880 Uniprot:J3QRR3
Length = 127
Score = 240 (89.5 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 45/68 (66%), Positives = 55/68 (80%)
Query: 92 TYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQ 151
TY IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA
Sbjct: 2 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 61
Query: 152 LDANFLKV 159
D F++V
Sbjct: 62 TDCTFIRV 69
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 178 (67.7 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 32/71 (45%), Positives = 51/71 (71%)
Query: 82 NMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGK 141
N+S+ I +S +GG+ +R++RE IE P+ +PE++ +G+ PP+G LL+GP G GK
Sbjct: 204 NLSNGLIPTINFSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGK 263
Query: 142 TLLARAVASQL 152
TLLA+A+A +L
Sbjct: 264 TLLAKAIAGEL 274
Score = 165 (63.1 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 32/70 (45%), Positives = 46/70 (65%)
Query: 90 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 149
++T+ +G LS EL I P+ P+ ++ +GI P G L+YGPPG GKTLLA+A+A
Sbjct: 562 NVTWDDVGALSGVREELTNSILRPIRYPKKYKNMGIDSPAGVLMYGPPGCGKTLLAKAIA 621
Query: 150 SQLDANFLKV 159
S+ ANF+ V
Sbjct: 622 SECQANFISV 631
Score = 138 (53.6 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+++KY+GES R +R++F A PC+IF DE DA+ +R ++ +R + +LL
Sbjct: 636 LLNKYVGESERAVRQVFQRAAASSPCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLT 695
Query: 506 QMDGFD 511
+MDG +
Sbjct: 696 EMDGLE 701
Score = 119 (46.9 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 32/75 (42%), Positives = 41/75 (54%)
Query: 439 FAILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQR 498
FAI I GES +R +F+ A PCIIF+DEIDAI +R E S D E +R
Sbjct: 279 FAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKR--ESASKDME-RR 335
Query: 499 TLMELLNQMDGFDSL 513
+ +LL MD + L
Sbjct: 336 IVSQLLTCMDSLNYL 350
>UNIPROTKB|F1NN52 [details] [associations]
symbol:F1NN52 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:AADN02022496 EMBL:AADN02022497
EMBL:AADN02022498 EMBL:AADN02022499 IPI:IPI00588479
Ensembl:ENSGALT00000026409 Uniprot:F1NN52
Length = 1337
Score = 206 (77.6 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 39/77 (50%), Positives = 56/77 (72%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
+VDP+ + S + + A+GGLS+ I L+E++ PLL PE+F+R I PP+GCL Y
Sbjct: 351 DVDPMQIDSS------VRFDAVGGLSDHISALKEMVVFPLLYPEVFERFKIQPPRGCLFY 404
Query: 135 GPPGTGKTLLARAVASQ 151
GPPGTGKTL+ARA+A++
Sbjct: 405 GPPGTGKTLVARALANE 421
Score = 112 (44.5 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 27/69 (39%), Positives = 38/69 (55%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 506
+ K++GES R +R +F+ A +P IIF DEID + R S+ I TL+ L
Sbjct: 440 LSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAPVRSSKQDQIHSSIVSTLLAL--- 496
Query: 507 MDGFDSLGQ 515
MDG D G+
Sbjct: 497 MDGLDGRGE 505
>WB|WBGene00010562 [details] [associations]
symbol:cdc-48.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0007052
GO:GO:0002119 GO:GO:0006469 GO:GO:0000003 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000223225 GeneTree:ENSGT00700000104502
GO:GO:0007091 EMBL:Z75712 KO:K13525 PIR:T23322 RefSeq:NP_492211.1
ProteinModelPortal:Q21222 SMR:Q21222 PaxDb:Q21222
EnsemblMetazoa:K04G2.3 GeneID:172586 KEGG:cel:CELE_K04G2.3
UCSC:K04G2.3 CTD:172586 WormBase:K04G2.3 InParanoid:Q21222
OMA:QVAPTIV NextBio:876139 Uniprot:Q21222
Length = 724
Score = 178 (67.7 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 56/162 (34%), Positives = 76/162 (46%)
Query: 1 MTTPVVDE---VRHKTLQDYRKKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGT 57
+T P DE + K Y L H +V T G C L AK G
Sbjct: 374 ITVPTQDERLDILSKIGNIYNFPLELHLDVARHTHGFTGGDL----CSL-LKAAKFARG- 427
Query: 58 RVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNP 117
R L+ R P + + E P +++++ IGG E E+++ + P +P
Sbjct: 428 RTHLERVNDARKRIRPTGIRQFIL----EVP-NVSWNDIGGNEELKLEIQQAVIWPQKHP 482
Query: 118 ELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 159
E F+R GI PP G LLYGPPG KTL+ARA+AS+ NFL V
Sbjct: 483 EAFERFGIDPPAGILLYGPPGCSKTLIARALASEAKMNFLAV 524
Score = 135 (52.6 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
+ K++G+S + IR++F+ AR P I+F DEIDA+G R SE +S + R L +LL
Sbjct: 529 LFSKWVGDSEKAIRDLFSRARQVAPTIVFFDEIDAVGSSRGSEKSSGVSD--RVLAQLLT 586
Query: 506 QMDGFD 511
++DG +
Sbjct: 587 ELDGLE 592
Score = 61 (26.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 128 PKGCLLYGPPGTGKTLLARAVASQLDAN 155
P L++G PG+GKTLL + VA L +
Sbjct: 272 PCSVLIWGLPGSGKTLLLKEVALVLSGS 299
>MGI|MGI:1917722 [details] [associations]
symbol:Atad2 "ATPase family, AAA domain containing 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
MGI:MGI:1917722 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0006200 GO:GO:0006351 GO:GO:0016887 eggNOG:COG0464
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 CTD:29028
HOVERGEN:HBG080873 ChiTaRS:ATAD2 EMBL:AK029867 EMBL:AK134319
IPI:IPI00135252 IPI:IPI00228860 RefSeq:NP_081711.2
UniGene:Mm.221758 ProteinModelPortal:Q8CDM1 SMR:Q8CDM1
IntAct:Q8CDM1 STRING:Q8CDM1 PhosphoSite:Q8CDM1 PRIDE:Q8CDM1
GeneID:70472 KEGG:mmu:70472 UCSC:uc007vtf.1 UCSC:uc007vtg.1
HOGENOM:HOG000034119 InParanoid:Q3UYW6 NextBio:331701
CleanEx:MM_ATAD2 Genevestigator:Q8CDM1
GermOnline:ENSMUSG00000022360 Uniprot:Q8CDM1
Length = 1040
Score = 198 (74.8 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 37/77 (48%), Positives = 55/77 (71%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
+VDP+ + S + + ++GGLS I L+E++ PLL PE+F++ I PP+GCL Y
Sbjct: 68 DVDPMQLDTS------VRFDSVGGLSSHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFY 121
Query: 135 GPPGTGKTLLARAVASQ 151
GPPGTGKTL+ARA+A++
Sbjct: 122 GPPGTGKTLVARALANE 138
Score = 116 (45.9 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 28/69 (40%), Positives = 38/69 (55%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 506
+ K++GES R +R +F+ A +P IIF DEID + R S I TL+ L
Sbjct: 157 LSKWVGESERQLRLLFDQAYQMRPAIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLAL--- 213
Query: 507 MDGFDSLGQ 515
MDG DS G+
Sbjct: 214 MDGLDSRGE 222
>TAIR|locus:2198748 [details] [associations]
symbol:AT1G05910 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
EMBL:CP002684 GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 EMBL:AC009999
OMA:QDETENG EMBL:AY056785 EMBL:BT002728 IPI:IPI00523133
IPI:IPI00542285 PIR:B86194 RefSeq:NP_563753.1 UniGene:At.26297
ProteinModelPortal:F4IAE9 SMR:F4IAE9 PRIDE:F4IAE9
EnsemblPlants:AT1G05910.1 GeneID:837101 KEGG:ath:AT1G05910
GeneFarm:1906 TAIR:At1g05910 HOGENOM:HOG000030246 Uniprot:F4IAE9
Length = 1210
Score = 192 (72.6 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 37/60 (61%), Positives = 45/60 (75%)
Query: 90 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 149
DI + IGGLSE I +L+E++ PLL PE F ITPP+G LL GPPGTGKTL+ARA+A
Sbjct: 377 DINFDDIGGLSEYINDLKEMVFFPLLYPEFFASYSITPPRGVLLCGPPGTGKTLIARALA 436
Score = 123 (48.4 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 28/70 (40%), Positives = 41/70 (58%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 505
++ K++GE+ R ++ +F A+ +QP IIF DEID + R S+ I TL+ L
Sbjct: 456 VLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLAL-- 513
Query: 506 QMDGFDSLGQ 515
MDG DS GQ
Sbjct: 514 -MDGLDSRGQ 522
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 198 (74.8 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 35/69 (50%), Positives = 54/69 (78%)
Query: 86 EDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLA 145
E+ DITY +GG+ +Q+ ++RE+IELPL PE+F +GI+ PKG L++G PGTGKT +A
Sbjct: 519 ENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIA 578
Query: 146 RAVASQLDA 154
+A+A++ +A
Sbjct: 579 KAIANESNA 587
Score = 161 (61.7 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 32/69 (46%), Positives = 46/69 (66%)
Query: 91 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 150
+T++ IGG++E +L+E I PL L+ + KG LLYGPPG GKTLLA+A+A+
Sbjct: 931 VTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIAN 990
Query: 151 QLDANFLKV 159
+ ANF+ V
Sbjct: 991 ECKANFISV 999
Score = 133 (51.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 37/107 (34%), Positives = 59/107 (55%)
Query: 407 LAIGASYLAGKHV-GIVTT-ITILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMF 462
++IG S G + GI T T + I +E + +I+ I+ K+IGES + +R++F
Sbjct: 554 MSIGISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIF 613
Query: 463 NYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 509
A + PCIIF+DEID+I +R ++ R + +LL MDG
Sbjct: 614 KKASEKTPCIIFIDEIDSIANKRSKSNNELEK---RVVSQLLTLMDG 657
Score = 116 (45.9 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 36/122 (29%), Positives = 59/122 (48%)
Query: 392 YLNLAADFTHNFTDGLAIGASYLAGKHVGIVTTITILFHEIPHEIGDFAILIHA--IVDK 449
Y +L F N+ G+ + GK T+L I +E I + ++
Sbjct: 956 YKHLYNKFNSNYNKGILLYGPPGCGK--------TLLAKAIANECKANFISVKGPELLTM 1007
Query: 450 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 509
+ GES +R++F+ AR PCIIF DEID++ R S T+ D R + ++L ++DG
Sbjct: 1008 WFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNSN-TNNDAS-DRVINQILTEIDG 1065
Query: 510 FD 511
+
Sbjct: 1066 IN 1067
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 198 (74.8 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 35/69 (50%), Positives = 54/69 (78%)
Query: 86 EDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLA 145
E+ DITY +GG+ +Q+ ++RE+IELPL PE+F +GI+ PKG L++G PGTGKT +A
Sbjct: 519 ENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIA 578
Query: 146 RAVASQLDA 154
+A+A++ +A
Sbjct: 579 KAIANESNA 587
Score = 161 (61.7 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 32/69 (46%), Positives = 46/69 (66%)
Query: 91 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 150
+T++ IGG++E +L+E I PL L+ + KG LLYGPPG GKTLLA+A+A+
Sbjct: 931 VTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIAN 990
Query: 151 QLDANFLKV 159
+ ANF+ V
Sbjct: 991 ECKANFISV 999
Score = 133 (51.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 37/107 (34%), Positives = 59/107 (55%)
Query: 407 LAIGASYLAGKHV-GIVTT-ITILFHEIPHEIGDFAILIHA--IVDKYIGESARLIREMF 462
++IG S G + GI T T + I +E + +I+ I+ K+IGES + +R++F
Sbjct: 554 MSIGISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIF 613
Query: 463 NYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 509
A + PCIIF+DEID+I +R ++ R + +LL MDG
Sbjct: 614 KKASEKTPCIIFIDEIDSIANKRSKSNNELEK---RVVSQLLTLMDG 657
Score = 116 (45.9 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 36/122 (29%), Positives = 59/122 (48%)
Query: 392 YLNLAADFTHNFTDGLAIGASYLAGKHVGIVTTITILFHEIPHEIGDFAILIHA--IVDK 449
Y +L F N+ G+ + GK T+L I +E I + ++
Sbjct: 956 YKHLYNKFNSNYNKGILLYGPPGCGK--------TLLAKAIANECKANFISVKGPELLTM 1007
Query: 450 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 509
+ GES +R++F+ AR PCIIF DEID++ R S T+ D R + ++L ++DG
Sbjct: 1008 WFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNSN-TNNDAS-DRVINQILTEIDG 1065
Query: 510 FD 511
+
Sbjct: 1066 IN 1067
>UNIPROTKB|P96281 [details] [associations]
symbol:Rv0435c "Transitional endoplasmic reticulum ATPase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0051301 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842573 HSSP:Q01853 HOGENOM:HOG000223225 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 KO:K13525
SMART:SM01073 EMBL:CP003248 PIR:A70632 RefSeq:NP_214949.1
RefSeq:NP_334860.1 RefSeq:YP_006513761.1 SMR:P96281
EnsemblBacteria:EBMYCT00000001241 EnsemblBacteria:EBMYCT00000071017
GeneID:13318302 GeneID:886352 GeneID:923768 KEGG:mtc:MT0451
KEGG:mtu:Rv0435c KEGG:mtv:RVBD_0435c PATRIC:18122702
TubercuList:Rv0435c OMA:KTHGFAG ProtClustDB:CLSK871802
Uniprot:P96281
Length = 728
Score = 169 (64.5 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 36/86 (41%), Positives = 53/86 (61%)
Query: 76 VDPLVYNMSHE-DPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
+ PL + S E GD+T +G ++ + L E + PL +P+ F R+G+ PP+G LLY
Sbjct: 445 IRPLSRSASDEVTVGDVTLDDVGDMAAAKQALTEAVLWPLQHPDTFARLGVEPPRGVLLY 504
Query: 135 GPPGTGKTLLARAVAS--QLDANFLK 158
GPPG GKT + RA+AS QL + +K
Sbjct: 505 GPPGCGKTFVVRALASTGQLSVHAVK 530
Score = 141 (54.7 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 28/69 (40%), Positives = 44/69 (63%)
Query: 446 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQ-RTLMELL 504
++DK++G S + +RE+F ARD P ++F+DE+DA+ RR G S D + R + LL
Sbjct: 534 LMDKWVGSSEKAVRELFRRARDSAPSLVFLDELDALAPRR---GQSFDSGVSDRVVAALL 590
Query: 505 NQMDGFDSL 513
++DG D L
Sbjct: 591 TELDGIDPL 599
Score = 89 (36.4 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 90 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAV 148
+I + G Q +L E ++L L P L Q +G G L+ GP G GK L RAV
Sbjct: 209 EIQIEELKGAQPQAAKLTEWLKLALDEPHLLQTLGAGTNLGVLVSGPAGVGKATLVRAV 267
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 176 (67.0 bits), Expect = 3.7e-19, Sum P(2) = 3.7e-19
Identities = 34/69 (49%), Positives = 47/69 (68%)
Query: 91 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 150
+T+ + G+ EL+E+++ L +P+ FQR+G PKG LL GPPGTGKTLLARAVA
Sbjct: 172 VTFDDVAGMENPKMELKEIVDY-LRDPKKFQRIGGKVPKGVLLVGPPGTGKTLLARAVAG 230
Query: 151 QLDANFLKV 159
+ D FL +
Sbjct: 231 EADVTFLSI 239
Score = 131 (51.2 bits), Expect = 3.7e-19, Sum P(2) = 3.7e-19
Identities = 26/66 (39%), Positives = 43/66 (65%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 506
++ ++G A +R++F A+ P IIF+DE+DA+G R + E ++TL +LL++
Sbjct: 245 IEMFVGVGAGRVRDLFATAKKSAPSIIFIDELDAVGRSRGAGLGGGHDEREQTLNQLLSE 304
Query: 507 MDGFDS 512
MDGFDS
Sbjct: 305 MDGFDS 310
>TAIR|locus:2062274 [details] [associations]
symbol:CCP1 "conserved in ciliated species and in the
land plants 1" species:3702 "Arabidopsis thaliana" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0019538
"protein metabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0017111 EMBL:AK317096
EMBL:AK317118 IPI:IPI00534781 RefSeq:NP_973600.1 UniGene:At.47485
UniGene:At.61738 ProteinModelPortal:B9DGC0 SMR:B9DGC0 PRIDE:B9DGC0
EnsemblPlants:AT2G34560.2 GeneID:818020 KEGG:ath:AT2G34560
TAIR:At2g34560 OMA:EQNGHAN PhylomeDB:B9DGC0 Genevestigator:Q3EBN1
Uniprot:B9DGC0
Length = 393
Score = 152 (58.6 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 34/77 (44%), Positives = 45/77 (58%)
Query: 439 FAILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQR 498
F I ++V K+ G+S +LIR +F+ AR H P IF+DEIDAI +R EG S +R
Sbjct: 174 FNISASSVVSKWRGDSEKLIRVLFDLARHHAPSTIFLDEIDAIISQRGGEGRSEHEASRR 233
Query: 499 TLMELLNQMDGFDSLGQ 515
ELL QMDG +
Sbjct: 234 LKTELLIQMDGLQKTNE 250
Score = 150 (57.9 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 29/75 (38%), Positives = 49/75 (65%)
Query: 90 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 149
+I + +I GL + L+E + +P+ P F + +TP KG LL+GPPGTGKT+LA+AVA
Sbjct: 108 NIKWESIKGLENAKKLLKEAVVMPIKYPTYFNGL-LTPWKGILLFGPPGTGKTMLAKAVA 166
Query: 150 SQLDANFLKVVSRTI 164
++ + F + + ++
Sbjct: 167 TECNTTFFNISASSV 181
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 168 (64.2 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 32/69 (46%), Positives = 45/69 (65%)
Query: 91 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 150
+T+ + G+ E EL E++E L P+ FQ++G PKGCLL GPPGTGKTLLA+A+A
Sbjct: 154 VTFHDVAGIDEAKEELAEIVEF-LREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAG 212
Query: 151 QLDANFLKV 159
+ F +
Sbjct: 213 EAKVPFFSI 221
Score = 139 (54.0 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 439 FAILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQR 498
F+I V+ ++G A +R+MF + + PC+IF+DEIDA+G R + E ++
Sbjct: 219 FSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVGRHRGVGFGGGNDEREQ 278
Query: 499 TLMELLNQMDGFDS 512
TL +LL +MDGF++
Sbjct: 279 TLNQLLVEMDGFEA 292
Score = 37 (18.1 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 419 VGIVTTITILFHEIPHEIG 437
+GI+ +T+LF ++ G
Sbjct: 12 MGIIILVTLLFGQVALNFG 30
>TAIR|locus:2200266 [details] [associations]
symbol:IAR1 "IAA-ALANINE RESISTANT 1" species:3702
"Arabidopsis thaliana" [GO:0005576 "extracellular region"
evidence=ISM] [GO:0016020 "membrane" evidence=IEA;ISS] [GO:0030001
"metal ion transport" evidence=IEA;ISS] [GO:0046873 "metal ion
transmembrane transporter activity" evidence=IEA;ISS] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] InterPro:IPR003689 Pfam:PF02535
GO:GO:0005783 GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR
EMBL:AC012563 GO:GO:0046873 eggNOG:COG0428 KO:K14713 EMBL:AF216524
EMBL:AY072108 EMBL:BT001920 EMBL:AK229148 EMBL:AY084533
IPI:IPI00547506 RefSeq:NP_564921.1 UniGene:At.17165 TCDB:2.A.5.4.7
PaxDb:Q9M647 PRIDE:Q9M647 EnsemblPlants:AT1G68100.1 GeneID:843138
KEGG:ath:AT1G68100 TAIR:At1g68100 HOGENOM:HOG000185308
InParanoid:Q9M647 OMA:FTHNITD PhylomeDB:Q9M647
ProtClustDB:CLSN2689081 Genevestigator:Q9M647 Uniprot:Q9M647
Length = 469
Score = 161 (61.7 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
Identities = 39/111 (35%), Positives = 58/111 (52%)
Query: 336 GHSHGKPIEKKKHTXXXXXXXXXXXXXXXXXXXYKKTKRVKAKTSSQSNDDIAVAGYLNL 395
G S K + K+K + K ++V+ ++SS V GYLNL
Sbjct: 275 GGSTDKSLRKRKTSASDATDKSDSGTEITSDGKSDKPEQVETRSSS------LVFGYLNL 328
Query: 396 AADFTHNFTDGLAIGASYLA-GKHVGIVTTITILFHEIPHEIGDFAILIHA 445
+D HNFTDG+A+G+++L G G T+ +L HE+P EIGDF IL+ +
Sbjct: 329 FSDGVHNFTDGMALGSAFLIYGSVGGWSRTMFLLAHELPQEIGDFGILVRS 379
Score = 142 (55.0 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
Identities = 47/141 (33%), Positives = 60/141 (42%)
Query: 225 VWGEALLSTILISLAPFLILFVVPLDTATGNEN--FLKVXXXXXXXXXXXDAFLHLIPHA 282
+W AL ++L+SLA + L ++P+ G + F+ DAFLH +PHA
Sbjct: 107 LWLNALGCSLLVSLASLICLVLLPIMFVQGKPSKWFVDSLALFGAGAMLGDAFLHQLPHA 166
Query: 283 IGAXXXXXXXX---------XXXXXXXXXXXIADLSVGLWVLFGILAFLCVEKFVRYVK- 332
G I DLSVGL VL GI+ FL VEK VRYV+
Sbjct: 167 FGGGHSHSNDHHENHDHHDHSHSDSPSHSHSIQDLSVGLSVLAGIVVFLLVEKLVRYVEE 226
Query: 333 ---G----GHGHSHGKPIEKK 346
G GH H H KK
Sbjct: 227 NSSGSNTWGHHHHHHHAGSKK 247
>ASPGD|ASPL0000044770 [details] [associations]
symbol:AN10191 species:162425 "Emericella nidulans"
[GO:0042406 "extrinsic to endoplasmic reticulum membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0031936 "negative regulation of chromatin silencing"
evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 GO:GO:0005524
EMBL:BN001307 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
EnsemblFungi:CADANIAT00008053 OMA:QPIMDQI Uniprot:C8VM55
Length = 1631
Score = 195 (73.7 bits), Expect = 5.2e-19, Sum P(2) = 5.2e-19
Identities = 36/69 (52%), Positives = 50/69 (72%)
Query: 91 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 150
+ + +GGL I +L+E++ LPLL PE+FQR I PP+G L +GPPGTGKTLLARA+A+
Sbjct: 566 VNFDNVGGLQGHIDQLKEMVSLPLLYPEIFQRFHIVPPRGVLFHGPPGTGKTLLARALAN 625
Query: 151 QLDANFLKV 159
+ + KV
Sbjct: 626 SVSSEGRKV 634
Score = 120 (47.3 bits), Expect = 5.2e-19, Sum P(2) = 5.2e-19
Identities = 29/69 (42%), Positives = 38/69 (55%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 506
+ K++GE+ R +R +F AR QP IIF DEID + R S+ I TL+ L
Sbjct: 645 LSKWVGEAERQLRLLFEEARKTQPSIIFFDEIDGLAPVRSSKQEQIHASIVSTLLAL--- 701
Query: 507 MDGFDSLGQ 515
MDG D GQ
Sbjct: 702 MDGMDGRGQ 710
Score = 40 (19.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 421 IVTTITILFHEIPHEIGDFAILIHAIVDKYIGESARLIREMFNYAR 466
+++T L IP D +L+ +++ A L+R +F Y++
Sbjct: 987 VISTFMGLLRSIPPT--D-PVLLLGVLESSEDIDATLVRNLFGYSK 1029
>UNIPROTKB|E1BC78 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:DAAA02038173 EMBL:DAAA02038174
IPI:IPI00923885 Ensembl:ENSBTAT00000061524 Uniprot:E1BC78
Length = 1372
Score = 198 (74.8 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
Identities = 37/77 (48%), Positives = 55/77 (71%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
+VDP+ + S + + ++GGLS I L+E++ PLL PE+F++ I PP+GCL Y
Sbjct: 399 DVDPMQLDSS------VRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFY 452
Query: 135 GPPGTGKTLLARAVASQ 151
GPPGTGKTL+ARA+A++
Sbjct: 453 GPPGTGKTLVARALANE 469
Score = 115 (45.5 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
Identities = 28/69 (40%), Positives = 38/69 (55%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 506
+ K++GES R +R +F+ A +P IIF DEID + R S I TL+ L
Sbjct: 488 LSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLAL--- 544
Query: 507 MDGFDSLGQ 515
MDG DS G+
Sbjct: 545 MDGLDSRGE 553
>UNIPROTKB|E2RRW1 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
CTD:29028 OMA:PSVYENG GeneTree:ENSGT00550000074694
EMBL:AAEX03008783 RefSeq:XP_850520.1 ProteinModelPortal:E2RRW1
Ensembl:ENSCAFT00000001534 GeneID:475090 KEGG:cfa:475090
Uniprot:E2RRW1
Length = 1373
Score = 198 (74.8 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
Identities = 37/77 (48%), Positives = 55/77 (71%)
Query: 75 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 134
+VDP+ + S + + ++GGLS I L+E++ PLL PE+F++ I PP+GCL Y
Sbjct: 393 DVDPMQLDSS------VRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFY 446
Query: 135 GPPGTGKTLLARAVASQ 151
GPPGTGKTL+ARA+A++
Sbjct: 447 GPPGTGKTLVARALANE 463
Score = 115 (45.5 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
Identities = 28/69 (40%), Positives = 38/69 (55%)
Query: 447 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 506
+ K++GES R +R +F+ A +P IIF DEID + R S I TL+ L
Sbjct: 482 LSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLAL--- 538
Query: 507 MDGFDSLGQ 515
MDG DS G+
Sbjct: 539 MDGLDSRGE 547
WARNING: HSPs involving 486 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.140 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 515 449 0.00092 118 3 11 22 0.50 33
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 736
No. of states in DFA: 609 (65 KB)
Total size of DFA: 251 KB (2135 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.93u 0.09s 36.02t Elapsed: 00:00:15
Total cpu time: 35.96u 0.09s 36.05t Elapsed: 00:00:17
Start: Thu Aug 15 14:21:42 2013 End: Thu Aug 15 14:21:59 2013
WARNINGS ISSUED: 2