Diaphorina citri psyllid: psy11253


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-----
MTTPVVDEVRHKTLQDYRKKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAIVLIFAVIFLHMPNLCDSHGHSHHSHEHSHDHGKLPSFKYSKQANEPYHQDVKHPITLQVWGEALLSTILISLAPFLILFVVPLDTATGNENFLKVLLSFGSGGLLGDAFLHLIPHAIGASKEHSHSHSHGGSHEHSHSIADLSVGLWVLFGILAFLCVEKFVRYVKGGHGHSHGKPIEKKKHTSSGEDSDLSDDEDDSDDVDYKKTKRVKAKTSSQSNDDIAVAGYLNLAADFTHNFTDGLAIGASYLAGKHVGIVTTITILFHEIPHEIGDFAILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQ
cccHHHHHHHHcHHHHHHHEEEEEcccccEEEEcccccCEEEEccccccccccccccEEEEcccccEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHccccccHHHHHHcccccccEEEEcccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccEEEEEEccccccccHHHHHHHHHHccccccHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccEEEEHHHHHccccccHHHHHHccccccccccccccccEEEEcccccccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcccCEEEEcccccccccccccccccHHHHHHHHHHHHHHHcccccccc
***PVV**VRHKTLQDYRKKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAIVLIFAVIFLHMPNLCD********************************QDVKHPITLQVWGEALLSTILISLAPFLILFVVPLDTATGNENFLKVLLSFGSGGLLGDAFLHLIPHAIG********************IADLSVGLWVLFGILAFLCVEKFVRYVKG*****************************************************IAVAGYLNLAADFTHNFTDGLAIGASYLAGKHVGIVTTITILFHEIPHEIGDFAILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS***SADREIQRTLMELLNQMDG******
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MTTPVVDEVRHKTLQDYRKKLTEHAEVEGRLRETTNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSRTIAIVLIFAVIFLHMPNLCDSHGHSHHSHEHSHDHGKLPSFKYSKQANEPYHQDVKHPITLQVWGEALLSTILISLAPFLILFVVPLDTATGNENFLKVLLSFGSGGLLGDAFLHLIPHAIGASKEHSHSHSHGGSHEHSHSIADLSVGLWVLFGILAFLCVEKFVRYVKGGHGHSHGKPIEKKKHTSSGEDSDLSDDEDDSDDVDYKKTKRVKAKTSSQSNDDIAVAGYLNLAADFTHNFTDGLAIGASYLAGKHVGIVTTITILFHEIPHEIGDFAILIHAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
26S protease regulatory subunit 10B homolog A The 26S protease is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex.confidentQ9SEI3
26S protease regulatory subunit 10B The 26S protease is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex.confidentP62334
26S protease regulatory subunit 10B The 26S protease is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex.confidentP62333

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623
GO:0005524 [MF]ATP bindingprobableGO:0043168, GO:0003674, GO:0005488, GO:0030554, GO:0035639, GO:0097159, GO:1901363, GO:0043167, GO:0036094, GO:0032553, GO:0032559, GO:0001883, GO:0032549, GO:0032555, GO:0017076, GO:0000166, GO:0032550, GO:1901265, GO:0001882

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 4B4T, chain L
Confidence level:very confident
Coverage over the Query: 34-161
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Template: 3H4M, chain A
Confidence level:very confident
Coverage over the Query: 82-187
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Template: 3H4M, chain A
Confidence level:very confident
Coverage over the Query: 409-513
View the alignment between query and template
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Template: 3CF0, chain A
Confidence level:very confident
Coverage over the Query: 379-512
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Template: 3CF2, chain A
Confidence level:very confident
Coverage over the Query: 85-223,237-269,280-282,298-481,496-514
View the alignment between query and template
View the model in PyMOL