BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11254
(741 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P62335|PRS10_SPETR 26S protease regulatory subunit 10B OS=Spermophilus
tridecemlineatus GN=PSMC6 PE=2 SV=1
Length = 389
Score = 625 bits (1612), Expect = e-178, Method: Compositional matrix adjust.
Identities = 325/457 (71%), Positives = 350/457 (76%), Gaps = 77/457 (16%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVR 69
R K LQDYRKKL EH E++GRL+E+REQ
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQ-------------------------------- 32
Query: 70 EQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKCWT---VIVKATNGPRYVVGCRRQLD 126
LKELTKQY+KSENDLKALQSVGQ+ V K T IVKATNGPRYVVGCRRQLD
Sbjct: 33 --LKELTKQYEKSENDLKALQSVGQIV--GEVLKQLTEEKFIVKATNGPRYVVGCRRQLD 88
Query: 127 KAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREV 186
K+KLK GTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG+++YS IGGLSEQIRELREV
Sbjct: 89 KSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREV 148
Query: 187 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKE 246
IELPL NPELFQRVGI PPKGCLLYGPPGTGKTLLARAVASQLD NFLKVVSS
Sbjct: 149 IELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSS------- 201
Query: 247 DMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMD 306
+IVDKYIGESARLIREMFNYAR+HQPCIIFMD
Sbjct: 202 ----------------------------SIVDKYIGESARLIREMFNYARDHQPCIIFMD 233
Query: 307 EIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPG 366
EIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD+L +VKMIMATNRPDTLDPALLRPG
Sbjct: 234 EIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPG 293
Query: 367 RLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEA 426
RLDRKI I LPNEQARL + IHAGPI KHGEIDYEA+VKLSD FNGADLRNVCTEA
Sbjct: 294 RLDRKIHIDLPNEQARLD---ILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEA 350
Query: 427 GLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYR 463
G+FAIR++ ++V QEDFMKAVRKV+D+KKL+ Y+
Sbjct: 351 GMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYK 387
Score = 350 bits (899), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 167/183 (91%), Positives = 174/183 (95%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + VIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLLARAVASQLD NFLKVVSS+I
Sbjct: 144 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 203
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ
Sbjct: 204 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 263
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
MDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I LPNEQARL+ILKIHAGPI KH
Sbjct: 264 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH 323
Query: 681 GEI 683
GEI
Sbjct: 324 GEI 326
>sp|P62334|PRS10_MOUSE 26S protease regulatory subunit 10B OS=Mus musculus GN=Psmc6 PE=1
SV=1
Length = 389
Score = 625 bits (1612), Expect = e-178, Method: Compositional matrix adjust.
Identities = 325/457 (71%), Positives = 350/457 (76%), Gaps = 77/457 (16%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVR 69
R K LQDYRKKL EH E++GRL+E+REQ
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQ-------------------------------- 32
Query: 70 EQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKCWT---VIVKATNGPRYVVGCRRQLD 126
LKELTKQY+KSENDLKALQSVGQ+ V K T IVKATNGPRYVVGCRRQLD
Sbjct: 33 --LKELTKQYEKSENDLKALQSVGQIV--GEVLKQLTEEKFIVKATNGPRYVVGCRRQLD 88
Query: 127 KAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREV 186
K+KLK GTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG+++YS IGGLSEQIRELREV
Sbjct: 89 KSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREV 148
Query: 187 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKE 246
IELPL NPELFQRVGI PPKGCLLYGPPGTGKTLLARAVASQLD NFLKVVSS
Sbjct: 149 IELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSS------- 201
Query: 247 DMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMD 306
+IVDKYIGESARLIREMFNYAR+HQPCIIFMD
Sbjct: 202 ----------------------------SIVDKYIGESARLIREMFNYARDHQPCIIFMD 233
Query: 307 EIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPG 366
EIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD+L +VKMIMATNRPDTLDPALLRPG
Sbjct: 234 EIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPG 293
Query: 367 RLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEA 426
RLDRKI I LPNEQARL + IHAGPI KHGEIDYEA+VKLSD FNGADLRNVCTEA
Sbjct: 294 RLDRKIHIDLPNEQARLD---ILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEA 350
Query: 427 GLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYR 463
G+FAIR++ ++V QEDFMKAVRKV+D+KKL+ Y+
Sbjct: 351 GMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYK 387
Score = 350 bits (899), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 167/183 (91%), Positives = 174/183 (95%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + VIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLLARAVASQLD NFLKVVSS+I
Sbjct: 144 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 203
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ
Sbjct: 204 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 263
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
MDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I LPNEQARL+ILKIHAGPI KH
Sbjct: 264 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH 323
Query: 681 GEI 683
GEI
Sbjct: 324 GEI 326
>sp|P62333|PRS10_HUMAN 26S protease regulatory subunit 10B OS=Homo sapiens GN=PSMC6 PE=1
SV=1
Length = 389
Score = 625 bits (1612), Expect = e-178, Method: Compositional matrix adjust.
Identities = 325/457 (71%), Positives = 350/457 (76%), Gaps = 77/457 (16%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVR 69
R K LQDYRKKL EH E++GRL+E+REQ
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQ-------------------------------- 32
Query: 70 EQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKCWT---VIVKATNGPRYVVGCRRQLD 126
LKELTKQY+KSENDLKALQSVGQ+ V K T IVKATNGPRYVVGCRRQLD
Sbjct: 33 --LKELTKQYEKSENDLKALQSVGQIV--GEVLKQLTEEKFIVKATNGPRYVVGCRRQLD 88
Query: 127 KAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREV 186
K+KLK GTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG+++YS IGGLSEQIRELREV
Sbjct: 89 KSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREV 148
Query: 187 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKE 246
IELPL NPELFQRVGI PPKGCLLYGPPGTGKTLLARAVASQLD NFLKVVSS
Sbjct: 149 IELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSS------- 201
Query: 247 DMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMD 306
+IVDKYIGESARLIREMFNYAR+HQPCIIFMD
Sbjct: 202 ----------------------------SIVDKYIGESARLIREMFNYARDHQPCIIFMD 233
Query: 307 EIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPG 366
EIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD+L +VKMIMATNRPDTLDPALLRPG
Sbjct: 234 EIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPG 293
Query: 367 RLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEA 426
RLDRKI I LPNEQARL + IHAGPI KHGEIDYEA+VKLSD FNGADLRNVCTEA
Sbjct: 294 RLDRKIHIDLPNEQARLD---ILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEA 350
Query: 427 GLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYR 463
G+FAIR++ ++V QEDFMKAVRKV+D+KKL+ Y+
Sbjct: 351 GMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYK 387
Score = 350 bits (899), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 167/183 (91%), Positives = 174/183 (95%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + VIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLLARAVASQLD NFLKVVSS+I
Sbjct: 144 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 203
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ
Sbjct: 204 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 263
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
MDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I LPNEQARL+ILKIHAGPI KH
Sbjct: 264 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH 323
Query: 681 GEI 683
GEI
Sbjct: 324 GEI 326
>sp|Q2KIW6|PRS10_BOVIN 26S protease regulatory subunit 10B OS=Bos taurus GN=PSMC6 PE=2
SV=1
Length = 389
Score = 622 bits (1605), Expect = e-177, Method: Compositional matrix adjust.
Identities = 324/457 (70%), Positives = 349/457 (76%), Gaps = 77/457 (16%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVR 69
R K LQDYRKKL EH E++GRL+E+REQ
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQ-------------------------------- 32
Query: 70 EQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKCWT---VIVKATNGPRYVVGCRRQLD 126
LKELTKQY+KSENDLKALQSVGQ+ V K T IVKATNGPRYVVGCRRQLD
Sbjct: 33 --LKELTKQYEKSENDLKALQSVGQIV--GEVLKQLTEEKFIVKATNGPRYVVGCRRQLD 88
Query: 127 KAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREV 186
K+KLK GTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG+++YS IGGLSEQIRELREV
Sbjct: 89 KSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREV 148
Query: 187 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKE 246
IELPL NPELFQRVGI PPKGCLLYGPPGTGKTLLARAVASQLD NFLKVVSS
Sbjct: 149 IELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSS------- 201
Query: 247 DMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMD 306
+IVDKYIGESARLIREMFNYAR+HQPCIIFMD
Sbjct: 202 ----------------------------SIVDKYIGESARLIREMFNYARDHQPCIIFMD 233
Query: 307 EIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPG 366
EIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD+L +VKMIMATNRPDTLDPALLRPG
Sbjct: 234 EIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPG 293
Query: 367 RLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEA 426
RLDRKI I LPNEQARL + IHAGPI KHGEIDYEA+VKLSD FNGADL NVCTEA
Sbjct: 294 RLDRKIHIDLPNEQARLD---ILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEA 350
Query: 427 GLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYR 463
G+FAIR++ ++V QEDFMKAVRKV+D+KKL+ Y+
Sbjct: 351 GMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYK 387
Score = 350 bits (899), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 167/183 (91%), Positives = 174/183 (95%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + VIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLLARAVASQLD NFLKVVSS+I
Sbjct: 144 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 203
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ
Sbjct: 204 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 263
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
MDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I LPNEQARL+ILKIHAGPI KH
Sbjct: 264 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH 323
Query: 681 GEI 683
GEI
Sbjct: 324 GEI 326
>sp|O17071|PRS10_CAEEL Probable 26S protease regulatory subunit 10B OS=Caenorhabditis
elegans GN=rpt-4 PE=1 SV=2
Length = 406
Score = 577 bits (1488), Expect = e-164, Method: Compositional matrix adjust.
Identities = 297/461 (64%), Positives = 345/461 (74%), Gaps = 75/461 (16%)
Query: 5 VVDEVRHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLL 64
+V++ R K L YR+KL E ++E +L+++R K E+
Sbjct: 17 IVEDERTKALNSYRRKLAECRDIEQKLKDLR-----------KKES-------------- 51
Query: 65 LHCVREQLKELTKQYDKSENDLKALQSVGQV--SLSTSVSKCWTVIVKATNGPRYVVGCR 122
E+TKQ+DKSEND+K+LQSVGQ+ + +S+ IVKATNGPRYVVGCR
Sbjct: 52 ---------EMTKQFDKSENDIKSLQSVGQIVGEVLKQLSE-EKFIVKATNGPRYVVGCR 101
Query: 123 RQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRE 182
R ++K +LK GTRV+LDMTTLTIMR LPREVDPLVY MSHEDPG+I+YS +GGL+EQIRE
Sbjct: 102 RSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRE 161
Query: 183 LREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
LREV+ELPL+NPELF+RVGITPPKGCLL+GPPGTGKTLLARAVASQLD NFLKVV
Sbjct: 162 LREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVV----- 216
Query: 243 TSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCI 302
SSAIVDKYIGESAR+IREMFNYAR+HQPCI
Sbjct: 217 ------------------------------SSAIVDKYIGESARMIREMFNYARDHQPCI 246
Query: 303 IFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPAL 362
+FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFDSLG+VK+IMATNRPDTLDPAL
Sbjct: 247 VFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPAL 306
Query: 363 LRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNV 422
LRPGRLDRKIEI LPNEQ+RL + IH+ I KHGEID+EAVVKLSD F+ ADLRNV
Sbjct: 307 LRPGRLDRKIEIGLPNEQSRLEI---LKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNV 363
Query: 423 CTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYR 463
CTEAG+FAIR+ERE+V EDFMKAVRKV D K+L+ Y+
Sbjct: 364 CTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKRLETKLDYK 404
Score = 350 bits (899), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 167/205 (81%), Positives = 184/205 (89%), Gaps = 1/205 (0%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + V+ELPL+NPELF+RVGITPPKGCLL+GPPGTGKTLLARAVASQLD NFLKVVSSAI
Sbjct: 161 ELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAI 220
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESAR+IREMFNYAR+HQPCI+FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ
Sbjct: 221 VDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 280
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
+DGFDSLG+VK+IMATNRPDTLDPALLRPGRLDRKIEI LPNEQ+RLEILKIH+ I KH
Sbjct: 281 LDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKH 340
Query: 681 GEIG-DAATKWVLPFTAGGFIYIAT 704
GEI +A K F+A + T
Sbjct: 341 GEIDFEAVVKLSDGFSAADLRNVCT 365
>sp|Q9SEI3|PS10A_ARATH 26S protease regulatory subunit 10B homolog A OS=Arabidopsis
thaliana GN=RPT4A PE=2 SV=1
Length = 399
Score = 566 bits (1459), Expect = e-160, Method: Compositional matrix adjust.
Identities = 292/468 (62%), Positives = 339/468 (72%), Gaps = 75/468 (16%)
Query: 3 TPVVDEVRHKT--LQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQ 60
T V + VR +T + +YRKKL +H E+E R+R
Sbjct: 2 TDVDESVRRRTAAVSEYRKKLLQHKELESRVR---------------------------- 33
Query: 61 HDLLLHCVREQLKELTKQYDKSENDLKALQSVGQV-SLSTSVSKCWTVIVKATNGPRYVV 119
RE L+ K+++K+E+DLK+LQSVGQ+ +IVKA++GPRYVV
Sbjct: 34 ------TARENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVV 87
Query: 120 GCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQ 179
GCR ++DK KL SGTRV LDMTTLTIMR LPREVDP+VYNM HEDPG+I+YSA+GGL +Q
Sbjct: 88 GCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQ 147
Query: 180 IRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 239
IRELRE IELPL+NPELF RVGI PPKG LLYGPPGTGKTLLARA+AS +DANFLKVV
Sbjct: 148 IRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVV-- 205
Query: 240 LFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQ 299
SSAI+DKYIGESARLIREMFNYAR HQ
Sbjct: 206 ---------------------------------SSAIIDKYIGESARLIREMFNYAREHQ 232
Query: 300 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLD 359
PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD+LG+VKMIMATNRPD LD
Sbjct: 233 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLD 292
Query: 360 PALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADL 419
PALLRPGRLDRKIEIPLPNEQ+R+ + IHA IAKHGEIDYEA+VKL++ FNGADL
Sbjct: 293 PALLRPGRLDRKIEIPLPNEQSRMD---ILKIHAAGIAKHGEIDYEAIVKLAEGFNGADL 349
Query: 420 RNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAG 467
RN+CTEAG+FAIR+ER+YV EDFMKAVRK+S+ KKL+ + Y + G
Sbjct: 350 RNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFG 397
Score = 342 bits (878), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 165/200 (82%), Positives = 176/200 (88%), Gaps = 1/200 (0%)
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
IELPL+NPELF RVGI PPKG LLYGPPGTGKTLLARA+AS +DANFLKVVSSAI+DKYI
Sbjct: 155 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYI 214
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 625
GESARLIREMFNYAR HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD
Sbjct: 215 GESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 274
Query: 626 SLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGEIG- 684
+LG+VKMIMATNRPD LDPALLRPGRLDRKIEIPLPNEQ+R++ILKIHA IAKHGEI
Sbjct: 275 NLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDY 334
Query: 685 DAATKWVLPFTAGGFIYIAT 704
+A K F I T
Sbjct: 335 EAIVKLAEGFNGADLRNICT 354
>sp|Q9MAK9|PS10B_ARATH 26S protease regulatory subunit S10B homolog B OS=Arabidopsis
thaliana GN=RPT4B PE=2 SV=1
Length = 399
Score = 565 bits (1455), Expect = e-160, Method: Compositional matrix adjust.
Identities = 291/464 (62%), Positives = 333/464 (71%), Gaps = 75/464 (16%)
Query: 7 DEVRHKT--LQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLL 64
D R +T + DYRKKL H E+E R+R
Sbjct: 6 DAARRRTAAVTDYRKKLLHHKELESRVR-------------------------------- 33
Query: 65 LHCVREQLKELTKQYDKSENDLKALQSVGQV-SLSTSVSKCWTVIVKATNGPRYVVGCRR 123
RE L+ K+++K+E+DLK+LQSVGQ+ +IVKA++GPRYVVGCR
Sbjct: 34 --TARENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRS 91
Query: 124 QLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIREL 183
++DK KL SGTRV LDMTTLTIMR LPREVDP+VYNM HEDPG+I+YSA+GGL +QIREL
Sbjct: 92 KVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIREL 151
Query: 184 REVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVT 243
RE IELPL+NPELF RVGI PPKG LLYGPPGTGKTLLARA+AS +DANFLKVV
Sbjct: 152 RESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVV------ 205
Query: 244 SKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCII 303
SSAI+DKYIGESARLIREMFNYAR HQPCII
Sbjct: 206 -----------------------------SSAIIDKYIGESARLIREMFNYAREHQPCII 236
Query: 304 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALL 363
FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD LG+VKMIMATNRPD LDPALL
Sbjct: 237 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 296
Query: 364 RPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVC 423
RPGRLDRKIEIPLPNEQ+R+ + IHA IAKHGEIDYEA+VKL + FNGADLRN+C
Sbjct: 297 RPGRLDRKIEIPLPNEQSRM---EILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNIC 353
Query: 424 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAG 467
TEAG+FAIR+ER+YV EDFMKAVRK+S+ KKL+ + Y + G
Sbjct: 354 TEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFG 397
Score = 342 bits (876), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 161/178 (90%), Positives = 169/178 (94%)
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
IELPL+NPELF RVGI PPKG LLYGPPGTGKTLLARA+AS +DANFLKVVSSAI+DKYI
Sbjct: 155 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYI 214
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 625
GESARLIREMFNYAR HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD
Sbjct: 215 GESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 274
Query: 626 SLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGEI 683
LG+VKMIMATNRPD LDPALLRPGRLDRKIEIPLPNEQ+R+EILKIHA IAKHGEI
Sbjct: 275 QLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEI 332
>sp|O74445|PRS10_SCHPO Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rpt4 PE=3 SV=2
Length = 388
Score = 520 bits (1339), Expect = e-146, Method: Compositional matrix adjust.
Identities = 270/454 (59%), Positives = 317/454 (69%), Gaps = 71/454 (15%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVR 69
R L+ Y+ L +H E + +L+++R ++L K+YDK+E+D+K+LQSVGQ +
Sbjct: 4 RDTALEKYKSYLLQHREWDSKLKDLRFGNRDLVKKYDKTEDDIKSLQSVGQ------IIG 57
Query: 70 EQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAK 129
E LK+L + IVKA++GPRYVVGCR +D++
Sbjct: 58 EVLKQLDSE---------------------------RFIVKASSGPRYVVGCRNNVDQSH 90
Query: 130 LKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIEL 189
L G RV+LDMTTLTIMR LPREVDPLVYNMS EDPGDI+++ +GGL+EQIRELREVIEL
Sbjct: 91 LVQGVRVSLDMTTLTIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIEL 150
Query: 190 PLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMA 249
PL NPELF RVGI PPKG LLYGPPGTGKTLLARAVA+ L NFLKVV
Sbjct: 151 PLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVV------------ 198
Query: 250 ILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEID 309
SSAIVDKYIGESAR+IREMF YA+ H+PC+IFMDEID
Sbjct: 199 -----------------------SSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEID 235
Query: 310 AIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLD 369
AIGGRRFSEGTSADREIQRTLMELLNQMDGFD LGQ K+IMATNRPDTLDPALLRPGRLD
Sbjct: 236 AIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLD 295
Query: 370 RKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLF 429
RKIEIPLPNE R+ + IH ++K GEIDYEA+VKL+D NGADLRNV TEAG
Sbjct: 296 RKIEIPLPNEVGRMEI---LKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFI 352
Query: 430 AIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYR 463
AI+ +R+YV Q D M A RKV+D KKL+ Y+
Sbjct: 353 AIKEDRDYVIQSDLMSAARKVADLKKLEGTIDYQ 386
Score = 498 bits (1281), Expect = e-139, Method: Compositional matrix adjust.
Identities = 260/433 (60%), Positives = 301/433 (69%), Gaps = 81/433 (18%)
Query: 73 KELTKQYDKSENDLKALQSVGQVSLSTSVSKCWT--VIVKATNGPRYVVGCRRQLDKAKL 130
++L K+YDK+E+D+K+LQSVGQ+ + + + + IVKA++GPRYVVGCR +D++ L
Sbjct: 33 RDLVKKYDKTEDDIKSLQSVGQI-IGEVLKQLDSERFIVKASSGPRYVVGCRNNVDQSHL 91
Query: 131 KSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELP 190
G RV+LDMTTLTIMR LPREVDPLVYNMS EDPGDI+++ +GGL+EQIRELREVIELP
Sbjct: 92 VQGVRVSLDMTTLTIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELP 151
Query: 191 LLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMAI 250
L NPELF RVGI PPKG LLYGPPGTGKTLLARAVA+ L NFLKVVSS
Sbjct: 152 LKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSS----------- 200
Query: 251 LMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDA 310
AIVDKYIGESAR+IREMF YA+ H+PC+IFMDEIDA
Sbjct: 201 ------------------------AIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDA 236
Query: 311 IGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDR 370
IGGRRFSEGTSADREIQRTLMELLNQMDGFD LGQ K+IMATNRPDTLDPALLRPGRLDR
Sbjct: 237 IGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDR 296
Query: 371 KIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFA 430
KIEIPLPNE R+ + IH ++K GEIDYEA+VKL+D NGADLRNV T
Sbjct: 297 KIEIPLPNEVGRMEI---LKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVT------ 347
Query: 431 IRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKV 490
EAG AI+ +R+YV Q D M A RKV
Sbjct: 348 ----------------------------------EAGFIAIKEDRDYVIQSDLMSAARKV 373
Query: 491 SDNKKLESKLDYK 503
+D KKLE +DY+
Sbjct: 374 ADLKKLEGTIDYQ 386
Score = 322 bits (824), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 153/181 (84%), Positives = 163/181 (90%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ VIELPL NPELF RVGI PPKG LLYGPPGTGKTLLARAVA+ L NFLKVVSSAIVD
Sbjct: 145 REVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVD 204
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KYIGESAR+IREMF YA+ H+PC+IFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD
Sbjct: 205 KYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 264
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
GFD LGQ K+IMATNRPDTLDPALLRPGRLDRKIEIPLPNE R+EILKIH ++K GE
Sbjct: 265 GFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGE 324
Query: 683 I 683
I
Sbjct: 325 I 325
>sp|P53549|PRS10_YEAST 26S protease subunit RPT4 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPT4 PE=1 SV=4
Length = 437
Score = 504 bits (1298), Expect = e-141, Method: Compositional matrix adjust.
Identities = 257/456 (56%), Positives = 316/456 (69%), Gaps = 71/456 (15%)
Query: 8 EVRHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHC 67
E +K L +++KL EH + +L++ R+ +++L K YDK+END+KALQS+GQ
Sbjct: 51 EAHNKALNQFKRKLLEHRRYDDQLKQRRQNIRDLEKLYDKTENDIKALQSIGQ------L 104
Query: 68 VREQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRRQLDK 127
+ E +KEL+++ IVKA++GPRY+VG R +D+
Sbjct: 105 IGEVMKELSEE---------------------------KYIVKASSGPRYIVGVRNSVDR 137
Query: 128 AKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVI 187
+KLK G RV LD+TTLTIMR LPRE DPLVYNM+ + G+IT+ IGGL+EQIRELREVI
Sbjct: 138 SKLKKGVRVTLDITTLTIMRILPRETDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVI 197
Query: 188 ELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKED 247
ELPL NPE+FQRVGI PPKG LLYGPPGTGKTLLA+AVA+ + ANF+
Sbjct: 198 ELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFI------------- 244
Query: 248 MAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDE 307
+ P +S IVDKYIGESAR+IREMF YA+ H+PCIIFMDE
Sbjct: 245 --------------------FSP--ASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDE 282
Query: 308 IDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGR 367
+DAIGGRRFSEGTSADREIQRTLMELL QMDGFD+LGQ K+IMATNRPDTLDPALLRPGR
Sbjct: 283 VDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGR 342
Query: 368 LDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAG 427
LDRK+EIPLPNE RL IH + K GE D+EA VK+SD FNGAD+RN TEAG
Sbjct: 343 LDRKVEIPLPNEAGRLEI---FKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAG 399
Query: 428 LFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYR 463
FAIR +R+++ +D MKAVRKV++ KKL+ Y+
Sbjct: 400 FFAIRDDRDHINPDDLMKAVRKVAEVKKLEGTIEYQ 435
Score = 478 bits (1230), Expect = e-134, Method: Compositional matrix adjust.
Identities = 251/447 (56%), Positives = 301/447 (67%), Gaps = 83/447 (18%)
Query: 60 QHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKCWT---VIVKATNGPR 116
++D L R+ +++L K YDK+END+KALQS+GQ L V K + IVKA++GPR
Sbjct: 69 RYDDQLKQRRQNIRDLEKLYDKTENDIKALQSIGQ--LIGEVMKELSEEKYIVKASSGPR 126
Query: 117 YVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGL 176
Y+VG R +D++KLK G RV LD+TTLTIMR LPRE DPLVYNM+ + G+IT+ IGGL
Sbjct: 127 YIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDPLVYNMTSFEQGEITFDGIGGL 186
Query: 177 SEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
+EQIRELREVIELPL NPE+FQRVGI PPKG LLYGPPGTGKTLLA+AVA+ + ANF+
Sbjct: 187 TEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFI-- 244
Query: 237 VSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYAR 296
+ P +S IVDKYIGESAR+IREMF YA+
Sbjct: 245 -------------------------------FSP--ASGIVDKYIGESARIIREMFAYAK 271
Query: 297 NHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPD 356
H+PCIIFMDE+DAIGGRRFSEGTSADREIQRTLMELL QMDGFD+LGQ K+IMATNRPD
Sbjct: 272 EHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPD 331
Query: 357 TLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNG 416
TLDPALLRPGRLDRK+EIPLPNE RL IH + K GE D+EA VK+SD FNG
Sbjct: 332 TLDPALLRPGRLDRKVEIPLPNEAGRLEI---FKIHTAKVKKTGEFDFEAAVKMSDGFNG 388
Query: 417 ADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSERE 476
AD+RN TEAG FAIR +R+
Sbjct: 389 ADIRNCA----------------------------------------TEAGFFAIRDDRD 408
Query: 477 YVTQEDFMKAVRKVSDNKKLESKLDYK 503
++ +D MKAVRKV++ KKLE ++Y+
Sbjct: 409 HINPDDLMKAVRKVAEVKKLEGTIEYQ 435
Score = 308 bits (790), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 149/205 (72%), Positives = 166/205 (80%), Gaps = 1/205 (0%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + VIELPL NPE+FQRVGI PPKG LLYGPPGTGKTLLA+AVA+ + ANF+ +S I
Sbjct: 192 ELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGI 251
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESAR+IREMF YA+ H+PCIIFMDE+DAIGGRRFSEGTSADREIQRTLMELL Q
Sbjct: 252 VDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQ 311
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
MDGFD+LGQ K+IMATNRPDTLDPALLRPGRLDRK+EIPLPNE RLEI KIH + K
Sbjct: 312 MDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKT 371
Query: 681 GEIG-DAATKWVLPFTAGGFIYIAT 704
GE +AA K F AT
Sbjct: 372 GEFDFEAAVKMSDGFNGADIRNCAT 396
>sp|Q54PJ1|PRS10_DICDI 26S protease regulatory subunit 10B OS=Dictyostelium discoideum
GN=psmC6 PE=1 SV=1
Length = 393
Score = 478 bits (1229), Expect = e-133, Method: Compositional matrix adjust.
Identities = 260/451 (57%), Positives = 310/451 (68%), Gaps = 76/451 (16%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVR 69
+ + LQ+YR +L EH E RL + H+L+
Sbjct: 8 KEQALQNYRDRLIEHKNAELRLNK--------------------------AHELI----- 36
Query: 70 EQLKELTKQYDKSENDLKALQSVGQV--SLSTSVSKCWTVIVKATNGPRYVVGCRRQLDK 127
K+L K + K+E+ +K +Q +G++ + S+ + IVKA NGPRYVV C DK
Sbjct: 37 ---KKLKKDFQKTEDHIKTIQYIGEIIGEVLRSLDE-ERFIVKACNGPRYVVRCANYQDK 92
Query: 128 AKL-KSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREV 186
A L G RV LD+TTLTI++ LPREVDP+++NM+ E PG ++Y IGGLS QIRELREV
Sbjct: 93 AHLLVPGARVTLDLTTLTILKILPREVDPIIFNMTAESPGSVSYGEIGGLSNQIRELREV 152
Query: 187 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKE 246
+ELPL+ PELF RVGI PKG LLYGPPGTGKTLLARA+AS L+ANFLKVV
Sbjct: 153 VELPLMIPELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASNLEANFLKVV--------- 203
Query: 247 DMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMD 306
SSAIVDKYIGESAR+IREMF YAR+HQPC+IFMD
Sbjct: 204 --------------------------SSAIVDKYIGESARVIREMFGYARDHQPCVIFMD 237
Query: 307 EIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPG 366
EIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD+L +VK+IMATNRPD LDPALLRPG
Sbjct: 238 EIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPG 297
Query: 367 RLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEA 426
RLDRKIEIPLPNE R+ + IHA I KHG++DYEA+ KL+D FN ADLRNVCTEA
Sbjct: 298 RLDRKIEIPLPNEAGRVD---VLKIHAANITKHGDVDYEAIAKLADGFNAADLRNVCTEA 354
Query: 427 GLFAIRSEREYVTQEDFMKAVRKVSDNKKLD 457
G+FAIR+ER+YV +EDFMKAVRK + KKL+
Sbjct: 355 GMFAIRAERDYVMEEDFMKAVRKCQEAKKLE 385
Score = 323 bits (827), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 155/205 (75%), Positives = 174/205 (84%), Gaps = 1/205 (0%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + V+ELPL+ PELF RVGI PKG LLYGPPGTGKTLLARA+AS L+ANFLKVVSSAI
Sbjct: 148 ELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASNLEANFLKVVSSAI 207
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESAR+IREMF YAR+HQPC+IFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ
Sbjct: 208 VDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 267
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
MDGFD+L +VK+IMATNRPD LDPALLRPGRLDRKIEIPLPNE R+++LKIHA I KH
Sbjct: 268 MDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAGRVDVLKIHAANITKH 327
Query: 681 GEIG-DAATKWVLPFTAGGFIYIAT 704
G++ +A K F A + T
Sbjct: 328 GDVDYEAIAKLADGFNAADLRNVCT 352
>sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=AF_1297 PE=3 SV=1
Length = 733
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 223/543 (41%), Positives = 314/543 (57%), Gaps = 86/543 (15%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
D+TY IGGL ++R +RE+IELPL +PELFQR+GI PPKG LLYGPPGTGKTL+A+AVA
Sbjct: 178 DVTYEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVA 237
Query: 227 SQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESAR 286
+++DA+F+ P I+ KY GES +
Sbjct: 238 NEVDAHFI-----------------------------------PISGPEIMSKYYGESEQ 262
Query: 287 LIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQV 346
+RE+F A+ + P IIF+DEID+I +R +R R + +LL MDG ++ G V
Sbjct: 263 RLREIFEEAKENAPSIIFIDEIDSIAPKREEVTGEVER---RVVAQLLALMDGLEARGDV 319
Query: 347 KMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEA 406
+I ATNRPD +DPAL RPGR DR+IEI +P+++ R I P+A+ ++D E
Sbjct: 320 IVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGR-KEILEIHTRKMPLAE--DVDLEE 376
Query: 407 VVKLSDSFNGADLRNVCTEAGLFAIRS-----------------EREYVTQEDFMKAVRK 449
+ +L++ F GADL +C EA + A+R E VT+EDFM+A++
Sbjct: 377 LAELTNGFVGADLEALCKEAAMHALRRVLPEIDIEAEEIPAEVIENLKVTREDFMEALKN 436
Query: 450 VSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLE-SKLDYKPVIEL 508
+ + + RE + + +K D LE +K + +E
Sbjct: 437 IEPS-------------------AMREVLVEVPNVKW----EDIGGLEHAKQELMEAVEW 473
Query: 509 PLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGES 568
PL PE+F+ I PP+G LL+GPPGTGKTLLA+AVA++ +ANF+ V ++ K++GES
Sbjct: 474 PLKYPEVFRAANIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGES 533
Query: 569 ARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLG 628
+ +REMF AR PC+IF DEID++ RR G S E R + +LL ++DG + L
Sbjct: 534 EKHVREMFRKARQVAPCVIFFDEIDSLAPRRGGIGDSHVTE--RVVSQLLTELDGLEELK 591
Query: 629 QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH--AGPIAKHGEIGDA 686
V +I ATNRPD +DPALLRPGRL+R I IP P+++AR+EI KIH P+A I +
Sbjct: 592 DVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNIEEL 651
Query: 687 ATK 689
A K
Sbjct: 652 AEK 654
Score = 202 bits (513), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 120/331 (36%), Positives = 184/331 (55%), Gaps = 51/331 (15%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++ + IGGL +EL E +E PL PE+F+ I PP+G LL+GPPGTGKTLLA+AVA
Sbjct: 451 NVKWEDIGGLEHAKQELMEAVEWPLKYPEVFRAANIKPPRGILLFGPPGTGKTLLAKAVA 510
Query: 227 SQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESAR 286
++ +ANF+ V ++ K++GES +
Sbjct: 511 NESNANFISV-----------------------------------KGPELLSKWVGESEK 535
Query: 287 LIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQV 346
+REMF AR PC+IF DEID++ RR G S E R + +LL ++DG + L V
Sbjct: 536 HVREMFRKARQVAPCVIFFDEIDSLAPRRGGIGDSHVTE--RVVSQLLTELDGLEELKDV 593
Query: 347 KMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEA 406
+I ATNRPD +DPALLRPGRL+R I IP P+++AR+ + I + P+A +++ E
Sbjct: 594 VVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARV-EIFKIHLRGKPLAD--DVNIEE 650
Query: 407 VVKLSDSFNGADLRNVCTEAGLFAIRSE-REYVTQEDFMKAVRKVSDNKKLDHCNSYRTE 465
+ + ++ ++GAD+ VC EAG+ AIR + +T+E+ +A +K+ KK H
Sbjct: 651 LAEKTEGYSGADIEAVCREAGMLAIRELIKPGMTREEAKEAAKKLKITKK--HFEE---- 704
Query: 466 AGLFAIRSEREYVTQEDFMKAVRKVSDNKKL 496
A++ R +T+ED K + + D ++
Sbjct: 705 ----ALKKVRPSLTKEDVEKYEKLIEDFHRM 731
>sp|Q58556|Y1156_METJA Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1156 PE=3 SV=1
Length = 903
Score = 368 bits (945), Expect = e-101, Method: Compositional matrix adjust.
Identities = 231/595 (38%), Positives = 329/595 (55%), Gaps = 102/595 (17%)
Query: 114 GPRYVVGCRRQLDKAKLKSGTRVALDM--TTLTIMRYLPREVDPL-VYNMSH----EDP- 165
GP + +R++ L G++V + + T LT + P+ V + +H E+P
Sbjct: 106 GPGFEDFVKRKILGQVLSKGSKVTIGVLGTALTFVVVSTTPAGPVRVTDFTHVELKEEPV 165
Query: 166 --------GDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTG 217
D+TY IGGL E+++++RE+IELP+ +PELF+++GI PPKG LL GPPGTG
Sbjct: 166 SEIKETKVPDVTYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTG 225
Query: 218 KTLLARAVASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIV 277
KTLLA+AVA++ ANF + I+
Sbjct: 226 KTLLAKAVANEAGANF-----------------------------------YVINGPEIM 250
Query: 278 DKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM-ELLNQ 336
KY+GE+ +R++F A + P IIF+DEIDAI +R A E++R L+ +LL
Sbjct: 251 SKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKR----DEATGEVERRLVAQLLTL 306
Query: 337 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPI 396
MDG GQV +I ATNRP+ LDPAL RPGR DR+I I +P+ + R I P+
Sbjct: 307 MDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGR-KEILQIHTRNMPL 365
Query: 397 AKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKL 456
A+ ++DY A V + F GADL +C EA + A+R + E + ++V DN K
Sbjct: 366 AEDVDLDYLADV--THGFVGADLAALCKEAAMRALRRVLPSIDLE-AEEIPKEVLDNLK- 421
Query: 457 DHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSD-----------NKKLES------- 498
VT +DF +A++ V N K E
Sbjct: 422 ---------------------VTMDDFKEALKDVEPSAMREVLVEVPNVKWEDIGGLEEV 460
Query: 499 KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 558
K + + +E PL E+F+++G+ PPKG LL+GPPGTGKTLLA+AVA++ ANF+ V
Sbjct: 461 KQELREAVEWPLKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGP 520
Query: 559 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 618
I K++GES + IRE+F AR PCIIF DEIDAI +R + +SA + + + +LL
Sbjct: 521 EIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSAVTD--KVVNQLL 578
Query: 619 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
++DG + V +I ATNRPD +DPALLRPGRLDR I +P+P+E+ARL+I KIH
Sbjct: 579 TELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIH 633
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/266 (40%), Positives = 154/266 (57%), Gaps = 40/266 (15%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++ + IGGL E +ELRE +E PL E+F+++G+ PPKG LL+GPPGTGKTLLA+AVA
Sbjct: 448 NVKWEDIGGLEEVKQELREAVEWPLKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVA 507
Query: 227 SQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESAR 286
++ ANF+ V I K++GES +
Sbjct: 508 NESGANFISV-----------------------------------KGPEIFSKWVGESEK 532
Query: 287 LIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQV 346
IRE+F AR PCIIF DEIDAI +R + +SA + + + +LL ++DG + V
Sbjct: 533 AIREIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSAVTD--KVVNQLLTELDGMEEPKDV 590
Query: 347 KMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEA 406
+I ATNRPD +DPALLRPGRLDR I +P+P+E+ARL IH + +++ E
Sbjct: 591 VVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDI---FKIHTRSMNLAEDVNLEE 647
Query: 407 VVKLSDSFNGADLRNVCTEAGLFAIR 432
+ K ++ + GAD+ +C EA + A+R
Sbjct: 648 LAKKTEGYTGADIEALCREAAMLAVR 673
>sp|O05209|VAT_THEAC VCP-like ATPase OS=Thermoplasma acidophilum (strain ATCC 25905 /
DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=vat
PE=1 SV=1
Length = 745
Score = 352 bits (903), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 214/549 (38%), Positives = 309/549 (56%), Gaps = 86/549 (15%)
Query: 163 EDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLA 222
E+ I+Y IGGLSEQ+ ++RE+IELPL +PELF+R+GITPPKG +LYGPPGTGKTL+A
Sbjct: 182 EEVSRISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIA 241
Query: 223 RAVASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIG 282
RAVA++ ANFL + I+ KY G
Sbjct: 242 RAVANESGANFLSI-----------------------------------NGPEIMSKYYG 266
Query: 283 ESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDS 342
+S + +RE+F+ A P IIF+DEID+I +R +R R + +LL MDG
Sbjct: 267 QSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEVQGEVER---RVVAQLLTLMDGMKE 323
Query: 343 LGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEI 402
G V +I ATNR D +DPAL RPGR DR+IEI +P+ R I P+ E
Sbjct: 324 RGHVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNGR-KEILMIHTRNMPLGMSEEE 382
Query: 403 DYEAVVKLSD---SFNGADLRNVCTEAGLFAIRS----------------EREYVTQEDF 443
+ + +++D F GADL + E+ + A+R E+ VT++DF
Sbjct: 383 KNKFLEEMADYTYGFVGADLAALVRESAMNALRRYLPEIDLDKPIPTEILEKMVVTEDDF 442
Query: 444 MKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYK 503
A++ + + L + E V +D + + D K+ + K
Sbjct: 443 KNALKSIEP-------------SSLREVMVEVPNVHWDD----IGGLEDVKR-----EIK 480
Query: 504 PVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 563
+ELPLL P++F+R+GI P KG LLYGPPG GKTLLA+AVA++ +ANF+ + ++ K
Sbjct: 481 ETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSK 540
Query: 564 YIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI-QRTLMELLNQMD 622
++GES + IRE+F A+ P I+F+DEID+I RR GT++D + +R + +LL +D
Sbjct: 541 WVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRR---GTTSDSGVTERIVNQLLTSLD 597
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAG--PIAKH 680
G + + V +I ATNRPD +DPALLR GR D+ I IP P+++ARL ILK+H P+A
Sbjct: 598 GIEVMNGVVVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPD 657
Query: 681 GEIGDAATK 689
++ D A +
Sbjct: 658 VDLNDIAQR 666
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/301 (36%), Positives = 175/301 (58%), Gaps = 44/301 (14%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++ + IGGL + RE++E +ELPLL P++F+R+GI P KG LLYGPPG GKTLLA+AVA
Sbjct: 463 NVHWDDIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVA 522
Query: 227 SQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESAR 286
++ +ANF+ + ++ K++GES +
Sbjct: 523 TESNANFISI-----------------------------------KGPEVLSKWVGESEK 547
Query: 287 LIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI-QRTLMELLNQMDGFDSLGQ 345
IRE+F A+ P I+F+DEID+I RR GT++D + +R + +LL +DG + +
Sbjct: 548 AIREIFKKAKQVAPAIVFLDEIDSIAPRR---GTTSDSGVTERIVNQLLTSLDGIEVMNG 604
Query: 346 VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYE 405
V +I ATNRPD +DPALLR GR D+ I IP P+++ARL+ + +H + ++D
Sbjct: 605 VVVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKEARLSI---LKVHTKNMPLAPDVDLN 661
Query: 406 AVVKLSDSFNGADLRNVCTEAGLFAIRSERE--YVTQEDFMKAVRKVSDNKKLDHCNSYR 463
+ + ++ + GADL N+C EAG+ A R + V+Q++F+ A++ + + + YR
Sbjct: 662 DIAQRTEGYVGADLENLCREAGMNAYRENPDATSVSQKNFLDALKTIRPSVDEEVIKFYR 721
Query: 464 T 464
T
Sbjct: 722 T 722
>sp|Q07590|SAV_SULAC Protein SAV OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM
639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=sav PE=3
SV=2
Length = 780
Score = 350 bits (898), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 211/543 (38%), Positives = 304/543 (55%), Gaps = 86/543 (15%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+++ IG L E +++RE++E P+ +PELFQR+GI PPKG LLYGPPGTGKTLLARA+A+
Sbjct: 209 VSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLLARALAN 268
Query: 228 QLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARL 287
++ A F+ V I+ K+ GES +
Sbjct: 269 EIGAYFITV-----------------------------------NGPEIMSKFYGESEQR 293
Query: 288 IREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVK 347
IRE+F A + P IIF+DEIDAI +R E + + E +R + +LL MDG G+V
Sbjct: 294 IREIFKEAEENAPSIIFIDEIDAIAPKR--EDVTGEVE-KRVVAQLLTLMDGIKGRGRVI 350
Query: 348 MIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAV 407
+I ATNRPD +DPAL RPGR DR+IEI P+ + R + +H + ++D + +
Sbjct: 351 VIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDI---LQVHTRNMPITDDVDLDKL 407
Query: 408 VKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAG 467
+++ + GADL + EA ++A+R + D KKL+
Sbjct: 408 AEMTYGYTGADLAALAKEAAIYALR----------------RFVDEKKLNLDQPTIPAEI 451
Query: 468 LFAIRSEREYVTQEDFMKAVRKV-----------------SDNKKLES-KLDYKPVIELP 509
+ ++ V+ DF+ A++ + +D L++ K + +E P
Sbjct: 452 IKELK-----VSMNDFLNALKSIQPSLLREVYVEVPKVNWNDIGGLDNVKQQLREAVEWP 506
Query: 510 LLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESA 569
L PELF + G+TPPKG LL+GPPGTGKT+LA+AVA++ ANF+ V I+ K++GES
Sbjct: 507 LRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESE 566
Query: 570 RLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI-QRTLMELLNQMDGFDSLG 628
+ IRE+F AR P +IF DEID+I R G S D + +R + +LL +MDG L
Sbjct: 567 KAIREIFRKARQAAPTVIFFDEIDSIAPIR---GLSTDSGVTERIVNQLLAEMDGIVPLN 623
Query: 629 QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAG--PIAKHGEIGDA 686
+V +I ATNRPD LDPALLRPGR DR I +P P++ AR EILK+H P+A+ + D
Sbjct: 624 KVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDI 683
Query: 687 ATK 689
A K
Sbjct: 684 AEK 686
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 105/267 (39%), Positives = 149/267 (55%), Gaps = 42/267 (15%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+ ++ IGGL ++LRE +E PL PELF + G+TPPKG LL+GPPGTGKT+LA+AVA+
Sbjct: 484 VNWNDIGGLDNVKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVAT 543
Query: 228 QLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARL 287
+ ANF+ V I+ K++GES +
Sbjct: 544 ESGANFIAV-----------------------------------RGPEILSKWVGESEKA 568
Query: 288 IREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI-QRTLMELLNQMDGFDSLGQV 346
IRE+F AR P +IF DEID+I R G S D + +R + +LL +MDG L +V
Sbjct: 569 IREIFRKARQAAPTVIFFDEIDSIAPIR---GLSTDSGVTERIVNQLLAEMDGIVPLNKV 625
Query: 347 KMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEA 406
+I ATNRPD LDPALLRPGR DR I +P P++ AR + +H + ++ E
Sbjct: 626 VIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEI---LKVHTKNVPLAEDVSLED 682
Query: 407 VVKLSDSFNGADLRNVCTEAGLFAIRS 433
+ + ++ + GADL + EA + A+RS
Sbjct: 683 IAEKAEGYTGADLEALVREATINAMRS 709
>sp|O26824|PAN_METTH Proteasome-activating nucleotidase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=pan PE=3 SV=1
Length = 410
Score = 344 bits (883), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 175/375 (46%), Positives = 235/375 (62%), Gaps = 41/375 (10%)
Query: 95 VSLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVD 154
++ T V V VK+T GP +V+ R +D+ +L+ G RVAL+ T +I+ LP E D
Sbjct: 75 IATVTEVLDDHRVAVKSTTGPHFVINYSRFIDRKQLEPGARVALNQQTFSIVDVLPSEKD 134
Query: 155 PLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPP 214
P+V M E+ D++Y IGGL EQ+RE++E +ELPL PELF+++GI PPKG LLYGPP
Sbjct: 135 PVVTGMEVEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKGVLLYGPP 194
Query: 215 GTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSS 274
GTGKTLLA+AVA + +A F+K+V+S FV
Sbjct: 195 GTGKTLLAKAVAHETNATFIKIVASEFVR------------------------------- 223
Query: 275 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 334
KYIGE ARL+R +F A+ P IIF+DEIDA+ +R TS DRE+QRTLM+LL
Sbjct: 224 ----KYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRLKSSTSGDREVQRTLMQLL 279
Query: 335 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAG 394
++DGF+S G V ++ ATNRPD LDPALLRPGR DR IE+PLPNE R + IH
Sbjct: 280 AELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGR---REILKIHTS 336
Query: 395 PIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNK 454
+A E+D E + +++D +GADL+ +CTEAG+FAIR ER+ VT DFM AV K+ +
Sbjct: 337 GMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADFMDAVDKIMGVE 396
Query: 455 KLDHCNSYRTEAGLF 469
K + Y+ E G+
Sbjct: 397 KEEE---YKQETGVM 408
Score = 241 bits (616), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 111/183 (60%), Positives = 138/183 (75%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ K +ELPL PELF+++GI PPKG LLYGPPGTGKTLLA+AVA + +A F+K+V+S
Sbjct: 162 EVKETVELPLKKPELFEKIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNATFIKIVASEF 221
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V KYIGE ARL+R +F A+ P IIF+DEIDA+ +R TS DRE+QRTLM+LL +
Sbjct: 222 VRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRLKSSTSGDREVQRTLMQLLAE 281
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
+DGF+S G V ++ ATNRPD LDPALLRPGR DR IE+PLPNE R EILKIH +A
Sbjct: 282 LDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALA 341
Query: 681 GEI 683
E+
Sbjct: 342 EEV 344
>sp|O60058|AFG2_SCHPO ATPase family gene 2 protein OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=afg2 PE=3 SV=1
Length = 809
Score = 339 bits (870), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 198/526 (37%), Positives = 294/526 (55%), Gaps = 66/526 (12%)
Query: 158 YNMSHED-------PGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLL 210
YN E+ P +T+S+IGGL QI ++R+++ELP NPELF+ I PP+G LL
Sbjct: 259 YNQGSEETQNFDGPPSAVTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLL 318
Query: 211 YGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFP 270
YGPPGTGKT++ RAVA++ +A F
Sbjct: 319 YGPPGTGKTMVMRAVAAEANAQV-----------------------------------FT 343
Query: 271 FYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 330
++V KY+GE+ +R++F AR HQP IIF+DEIDA+ +R + + A+ R +
Sbjct: 344 IDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAE---SRAV 400
Query: 331 MELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPIS 390
LL +DG + G+V +I ATNRP+++D AL RPGRL+++IEI +P++ ARL
Sbjct: 401 ATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIK--L 458
Query: 391 IHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKV 450
+ +G + + E + + ++ GADL V EA L AI+ + +
Sbjct: 459 LLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIK------------RTISLQ 506
Query: 451 SDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKA--VRKVSDNKKLESKLDYKPVIEL 508
D LD + + + FA+ S R+ +E M++ V + E K K +E
Sbjct: 507 KDTSGLDIFGAVQMDDLEFALSSVRQSAMREFMMESPNVHWSDIGGQEEVKQKLKESVEW 566
Query: 509 PLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGES 568
PL + E F R+G+ PPKG LLYGPPG KT+ A+A+A++ NF+ V + DK++GES
Sbjct: 567 PLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGES 626
Query: 569 ARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLG 628
R +R++F AR P +IF DEIDA+ R E S+D R + LLN++DG ++L
Sbjct: 627 ERAVRQVFQKARQASPSVIFFDEIDALTANR-GEDNSSD----RVVAALLNELDGIEALR 681
Query: 629 QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
V ++ ATNRPD +DPAL+RPGRLDR + + PN +AR +I+KI A
Sbjct: 682 NVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQA 727
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 163/301 (54%), Gaps = 48/301 (15%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++ +S IGG E ++L+E +E PL + E F R+G+ PPKG LLYGPPG KT+ A+A+A
Sbjct: 544 NVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIA 603
Query: 227 SQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESAR 286
++ NF+ V G +L DK++GES R
Sbjct: 604 TETGLNFIAV---------------KGPEL--------------------FDKFVGESER 628
Query: 287 LIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQV 346
+R++F AR P +IF DEIDA+ R E S+DR + LLN++DG ++L V
Sbjct: 629 AVRQVFQKARQASPSVIFFDEIDALTANR-GEDNSSDR----VVAALLNELDGIEALRNV 683
Query: 347 KMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEA 406
++ ATNRPD +DPAL+RPGRLDR + + PN +AR + I A + ++D +
Sbjct: 684 LVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEAR---KQIVKIQAEKMKFAEDVDLDL 740
Query: 407 VVKLSDSFNGADLRNVCTEAGLFAIRSEREY--VTQEDF---MKAVRKVSDNKKLDHCNS 461
+ + ++ +GA++ +C EAGL A+ + E + Q F + A+RK L++ S
Sbjct: 741 IAEKTEGCSGAEVVALCQEAGLIAMHEDLEAKEICQAHFKTALLALRKAITRDMLEYYAS 800
Query: 462 Y 462
+
Sbjct: 801 F 801
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/182 (46%), Positives = 125/182 (68%), Gaps = 5/182 (2%)
Query: 505 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKY 564
++ELP NPELF+ I PP+G LLYGPPGTGKT++ RAVA++ +A + ++V KY
Sbjct: 294 IVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKY 353
Query: 565 IGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 624
+GE+ +R++F AR HQP IIF+DEIDA+ +R + + A+ R + LL +DG
Sbjct: 354 LGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAE---SRAVATLLTLLDGM 410
Query: 625 DSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGEIG 684
+ G+V +I ATNRP+++D AL RPGRL+++IEI +P++ ARL+I+K+ + EI
Sbjct: 411 ANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVPN--EIN 468
Query: 685 DA 686
DA
Sbjct: 469 DA 470
>sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2
SV=1
Length = 807
Score = 335 bits (858), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 201/519 (38%), Positives = 294/519 (56%), Gaps = 54/519 (10%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++ Y +GG+ +Q+ ++RE++ELPL +P+LF+ +G+ PPKG LLYGPPG+GKTL+ARAVA
Sbjct: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
Query: 227 SQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESAR 286
++ A F F I+ K GES
Sbjct: 264 NETGAFF-----------------------------------FCINGPEIMSKLAGESES 288
Query: 287 LIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQV 346
+R+ F A + P IIF+DEID+I +R E T + E +R + +LL MDG S V
Sbjct: 289 NLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKSRAHV 345
Query: 347 KMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEA 406
+I ATNRP+++DPAL R GR DR+I+I +P+E RL + IH + ++D E
Sbjct: 346 IVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE---VLRIHTKNMKLSDDVDLER 402
Query: 407 VVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEA 466
+ K + + GADL +CTEA L IR + + + ED + + N ++T
Sbjct: 403 IAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED--ETIDAEVLNSMAVTNEHFQTAL 460
Query: 467 GLFAIRSEREYVTQEDFMKAVRKVS--DNKKLES-KLDYKPVIELPLLNPELFQRVGITP 523
G + RE V + V VS D LE+ K + + ++ P+ +PE F++ G++P
Sbjct: 461 GTSNPSALRETVVE------VPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 514
Query: 524 PKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQ 583
KG L YGPPG GKTLLA+A+A++ ANF+ V ++ + GES +RE+F+ AR
Sbjct: 515 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 574
Query: 584 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLD 643
PC++F DE+D+I +R S A R L +LL +MDG + V +I ATNRPD +D
Sbjct: 575 PCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIID 634
Query: 644 PALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAKH 680
PALLRPGRLD+ I IPLP+E +R +I K + PIAK+
Sbjct: 635 PALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKN 673
Score = 189 bits (481), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 167/313 (53%), Gaps = 44/313 (14%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++++ IGGL REL+E ++ P+ +PE F++ G++P KG L YGPPG GKTLLA+A+A
Sbjct: 477 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
Query: 227 SQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESAR 286
++ ANF+ V +T + GES
Sbjct: 537 NECQANFISVKGPELLT-----------------------------------MWFGESEA 561
Query: 287 LIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQV 346
+RE+F+ AR PC++F DE+D+I +R S A R L +LL +MDG + V
Sbjct: 562 NVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTV 621
Query: 347 KMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEA 406
+I ATNRPD +DPALLRPGRLD+ I IPLP+E +R + + PIAK+ +D A
Sbjct: 622 FIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSR-HQIFKACLRKSPIAKN--VDLRA 678
Query: 407 VVKLSDSFNGADLRNVCTEAGLFAIRS------EREYVTQEDFMKAVRKVSDNKKLDHCN 460
+ + + F+GAD+ +C A +AIR ERE ++E+ D++ +
Sbjct: 679 LARHTQGFSGADITEICQRACKYAIRENIEKDIERERKSRENPEAMDEDTVDDEVAEIKA 738
Query: 461 SYRTEAGLFAIRS 473
++ E+ FA RS
Sbjct: 739 AHFEESMKFARRS 751
>sp|Q9HPF0|CDCH_HALSA Protein CdcH OS=Halobacterium salinarum (strain ATCC 700922 / JCM
11081 / NRC-1) GN=cdcH PE=3 SV=1
Length = 742
Score = 333 bits (855), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 193/525 (36%), Positives = 290/525 (55%), Gaps = 82/525 (15%)
Query: 166 GDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAV 225
G ITY IGGL +I+ +RE++ELP+ +P++FQ++GI PP+G LL+GPPGTGKTLLA+AV
Sbjct: 184 GGITYEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAV 243
Query: 226 ASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESA 285
A++ A+F F I+ KY GES
Sbjct: 244 ANETSASF-----------------------------------FSIAGPEIISKYYGESE 268
Query: 286 RLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQ 345
+ +RE+F A++ P IIF+DE+D+I +R E + + E +R + +LL MDG + GQ
Sbjct: 269 QQLREIFEDAKDDSPSIIFIDELDSIAPKR--EDVTGEVE-RRVVAQLLTMMDGLEGRGQ 325
Query: 346 VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYE 405
V +I ATNR D +DPAL RPGR DR+IEI +P+E R + IH + +++
Sbjct: 326 VIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGREEI---LKIHTRGMPLSDDVNLS 382
Query: 406 AVVKLSDSFNGADLRNVCTEAGLFAIRS-----------------EREYVTQEDFMKAVR 448
+ + F GAD+ ++ EA + A+R +R V +EDF A+
Sbjct: 383 TLADDTHGFVGADIESLSKEAAMRALRRYLPEIDLDEEDIPPSLIDRMIVKREDFKGALS 442
Query: 449 KVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKPVIEL 508
+V + + + E +T +D E+K + K +E
Sbjct: 443 EVE-------------PSAMREVLVELPKITWDDV---------GGLTEAKNNVKESVEW 480
Query: 509 PLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGES 568
PL PE F R+G+ PP G LLYGPPGTGKTL+A+AVA++ +ANF+ V ++ K++GES
Sbjct: 481 PLNQPEKFTRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES 540
Query: 569 ARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLG 628
+ IR+ F AR P +IF DE+D++ R T + +R + +LL ++DG + +
Sbjct: 541 EKAIRQTFRKARQVAPTVIFFDELDSLAPGRGQ--TGGNNVSERVVNQLLTELDGLEEME 598
Query: 629 QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
+V +I ATNRPD +DPAL+R GR DR +++ P + R +ILKIH
Sbjct: 599 EVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQILKIH 643
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 145/269 (53%), Gaps = 40/269 (14%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
IT+ +GGL+E ++E +E PL PE F R+G+ PP G LLYGPPGTGKTL+A+AVA+
Sbjct: 459 ITWDDVGGLTEAKNNVKESVEWPLNQPEKFTRMGVEPPAGVLLYGPPGTGKTLMAKAVAN 518
Query: 228 QLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARL 287
+ +ANF+ V G QL + K++GES +
Sbjct: 519 ETNANFISV---------------RGPQL--------------------LSKWVGESEKA 543
Query: 288 IREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVK 347
IR+ F AR P +IF DE+D++ R T + +R + +LL ++DG + + +V
Sbjct: 544 IRQTFRKARQVAPTVIFFDELDSLAPGRGQ--TGGNNVSERVVNQLLTELDGLEEMEEVM 601
Query: 348 MIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAV 407
+I ATNRPD +DPAL+R GR DR +++ P + R + IH ++ +
Sbjct: 602 VIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGR---EQILKIHTQDTPLAADVSLREL 658
Query: 408 VKLSDSFNGADLRNVCTEAGLFAIRSERE 436
+ +D + G+DL N+ EA + A+R + +
Sbjct: 659 AERADGYVGSDLANIAREAAIEALRDDED 687
>sp|Q9LZF6|CD48E_ARATH Cell division control protein 48 homolog E OS=Arabidopsis thaliana
GN=CDC48E PE=1 SV=2
Length = 810
Score = 331 bits (849), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 202/542 (37%), Positives = 301/542 (55%), Gaps = 55/542 (10%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++ Y +GG+ +Q+ ++RE++ELPL +P+LF+ +G+ PPKG LLYGPPG+GKTL+ARAVA
Sbjct: 203 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 262
Query: 227 SQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESAR 286
++ A F F I+ K GES
Sbjct: 263 NETGAFF-----------------------------------FCINGPEIMSKLAGESES 287
Query: 287 LIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQV 346
+R+ F A + P IIF+DEID+I +R E T+ + E +R + +LL MDG S V
Sbjct: 288 NLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTNGEVE-RRIVSQLLTLMDGLKSRAHV 344
Query: 347 KMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEA 406
++ ATNRP+++DPAL R GR DR+I+I +P+E RL + IH + ++D E
Sbjct: 345 IVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLE---VLRIHTKNMKLAEDVDLER 401
Query: 407 VVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEA 466
+ K + + GADL +CTEA L IR + + + ED ++ N + T
Sbjct: 402 ISKDTHGYVGADLAALCTEAALQCIREKMDVIDLED--DSIDAEILNSMAVSNEHFHTAL 459
Query: 467 GLFAIRSEREYVTQEDFMKAVRKVS--DNKKLES-KLDYKPVIELPLLNPELFQRVGITP 523
G + RE V + V VS D LE+ K + + ++ P+ +PE F++ G++P
Sbjct: 460 GNSNPSALRETVVE------VPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 513
Query: 524 PKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQ 583
KG L YGPPG GKTLLA+A+A++ ANF+ V ++ + GES +RE+F+ AR
Sbjct: 514 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 573
Query: 584 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLD 643
PC++F DE+D+I +R + A R L +LL +MDG ++ V +I ATNRPD +D
Sbjct: 574 PCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIID 633
Query: 644 PALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAKHGEIGDAATKWVLPFTAGGFIY 701
ALLRPGRLD+ I IPLP+E +RL I K + P+AK ++ A K+ F+
Sbjct: 634 SALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDV-TALAKYTQGFSGADITE 692
Query: 702 IA 703
I
Sbjct: 693 IC 694
Score = 189 bits (481), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 151/270 (55%), Gaps = 38/270 (14%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++++ IGGL REL+E ++ P+ +PE F++ G++P KG L YGPPG GKTLLA+A+A
Sbjct: 476 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 535
Query: 227 SQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESAR 286
++ ANF+ V +T + GES
Sbjct: 536 NECQANFISVKGPELLT-----------------------------------MWFGESEA 560
Query: 287 LIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQV 346
+RE+F+ AR PC++F DE+D+I +R + A R L +LL +MDG ++ V
Sbjct: 561 NVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTV 620
Query: 347 KMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEA 406
+I ATNRPD +D ALLRPGRLD+ I IPLP+E +RL + + + P+AK ++D A
Sbjct: 621 FIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRL-NIFKACLRKSPVAK--DVDVTA 677
Query: 407 VVKLSDSFNGADLRNVCTEAGLFAIRSERE 436
+ K + F+GAD+ +C A +AIR E
Sbjct: 678 LAKYTQGFSGADITEICQRACKYAIRENIE 707
>sp|Q96372|CDC48_CAPAN Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP
PE=2 SV=1
Length = 805
Score = 331 bits (849), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 199/518 (38%), Positives = 292/518 (56%), Gaps = 54/518 (10%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++ Y +GG+ +Q+ ++RE++ELPL +P+LF+ +G+ PPKG LLYGPPG+GKTL+ARAVA
Sbjct: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
Query: 227 SQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESAR 286
++ A F F I+ K GES
Sbjct: 264 NETGAFF-----------------------------------FCINGPEIMSKLAGESES 288
Query: 287 LIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQV 346
+R+ F A + P IIF+DEID+I +R E T + E +R + +LL MDG S V
Sbjct: 289 NLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKSRAHV 345
Query: 347 KMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEA 406
++ ATNRP+++DPAL R GR DR+I+I +P+E RL + IH + E+D E
Sbjct: 346 IVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEV---LGIHTKNMKLAEEVDLER 402
Query: 407 VVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEA 466
+ K + + GADL +CTEA L IR + + + ED + N ++T
Sbjct: 403 ISKDTHGYVGADLAALCTEAALQCIREKMDVLDLED--DTIDAEVLNSMAVTNEHFQTAL 460
Query: 467 GLFAIRSEREYVTQEDFMKAVRKVS--DNKKLES-KLDYKPVIELPLLNPELFQRVGITP 523
G + RE V + V VS D LE+ K + + ++ P+ PE F++ G++P
Sbjct: 461 GTSNPSALRETVVE------VPNVSWEDIGGLENVKRELQETVQYPVEPPEKFEKFGMSP 514
Query: 524 PKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQ 583
KG L YGPPG GKTLLA+A+A++ ANF+ V ++ + GES +RE+F+ AR
Sbjct: 515 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 574
Query: 584 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLD 643
PC++F DE+D+I +R S A R L +LL +MDG ++ V +I ATNRPD +D
Sbjct: 575 PCVLFFDELDSIATQRGSSSGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIID 634
Query: 644 PALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAK 679
PALLRPGRLD+ I IPLP+E +R +I K + P++K
Sbjct: 635 PALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSK 672
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 106/282 (37%), Positives = 154/282 (54%), Gaps = 44/282 (15%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++++ IGGL REL+E ++ P+ PE F++ G++P KG L YGPPG GKTLLA+A+A
Sbjct: 477 NVSWEDIGGLENVKRELQETVQYPVEPPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
Query: 227 SQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESAR 286
++ ANF+ V +T + GES
Sbjct: 537 NECQANFISVKGPELLT-----------------------------------MWFGESEA 561
Query: 287 LIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQV 346
+RE+F+ AR PC++F DE+D+I +R S A R L +LL +MDG ++ V
Sbjct: 562 NVREIFDKARQSAPCVLFFDELDSIATQRGSSSGDAGGAADRVLNQLLTEMDGMNAKKTV 621
Query: 347 KMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEA 406
+I ATNRPD +DPALLRPGRLD+ I IPLP+E +R + + P++K +ID A
Sbjct: 622 FIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSR-HQIFKACLRKSPLSK--DIDLRA 678
Query: 407 VVKLSDSFNGADLRNVCTEAGLFAIRS------EREYVTQED 442
+ K + F+GAD+ +C A +AIR ERE QE+
Sbjct: 679 LAKHTQGFSGADVTEICQRACKYAIRENIEKDIEREKRRQEN 720
>sp|P54609|CD48A_ARATH Cell division control protein 48 homolog A OS=Arabidopsis thaliana
GN=CDC48A PE=1 SV=1
Length = 809
Score = 331 bits (849), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 206/543 (37%), Positives = 301/543 (55%), Gaps = 56/543 (10%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
D+ Y +GG+ +Q+ ++RE++ELPL +P+LF+ +G+ PPKG LLYGPPG+GKTL+ARAVA
Sbjct: 203 DVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 262
Query: 227 SQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESAR 286
++ A F F I+ K GES
Sbjct: 263 NETGAFF-----------------------------------FCINGPEIMSKLAGESES 287
Query: 287 LIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQV 346
+R+ F A + P IIF+DEID+I +R E T+ + E +R + +LL MDG S V
Sbjct: 288 NLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTNGEVE-RRIVSQLLTLMDGLKSRAHV 344
Query: 347 KMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEA 406
++ ATNRP+++DPAL R GR DR+I+I +P+E RL + IH + ++D E
Sbjct: 345 IVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLE---VLRIHTKNMKLAEDVDLER 401
Query: 407 VVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEA 466
+ K + + GADL +CTEA L IR + + + ED ++ N + T
Sbjct: 402 ISKDTHGYVGADLAALCTEAALQCIREKMDVIDLED--DSIDAEILNSMAVTNEHFHTAL 459
Query: 467 GLFAIRSEREYVTQEDFMKAVRKVSDNK--KLES-KLDYKPVIELPLLNPELFQRVGITP 523
G + RE V + V VS N LE+ K + + ++ P+ +PE F++ G++P
Sbjct: 460 GNSNPSALRETVVE------VPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 513
Query: 524 PKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQ 583
KG L YGPPG GKTLLA+A+A++ ANF+ V ++ + GES +RE+F+ AR
Sbjct: 514 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 573
Query: 584 PCIIFMDEIDAIGGRR-FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTL 642
PC++F DE+D+I +R G R L +LL +MDG ++ V +I ATNRPD +
Sbjct: 574 PCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDII 633
Query: 643 DPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAKHGEIGDAATKWVLPFTAGGFI 700
D ALLRPGRLD+ I IPLP+E +RL I K + PIAK +IG A K+ F+
Sbjct: 634 DSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIG-ALAKYTQGFSGADIT 692
Query: 701 YIA 703
I
Sbjct: 693 EIC 695
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/271 (37%), Positives = 151/271 (55%), Gaps = 39/271 (14%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
+++++ IGGL REL+E ++ P+ +PE F++ G++P KG L YGPPG GKTLLA+A+A
Sbjct: 476 NVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 535
Query: 227 SQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESAR 286
++ ANF+ V +T + GES
Sbjct: 536 NECQANFISVKGPELLT-----------------------------------MWFGESEA 560
Query: 287 LIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ-RTLMELLNQMDGFDSLGQ 345
+RE+F+ AR PC++F DE+D+I +R R L +LL +MDG ++
Sbjct: 561 NVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKT 620
Query: 346 VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYE 405
V +I ATNRPD +D ALLRPGRLD+ I IPLP+E +RL + + ++ PIAK ++D
Sbjct: 621 VFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRL-NIFKAALRKSPIAK--DVDIG 677
Query: 406 AVVKLSDSFNGADLRNVCTEAGLFAIRSERE 436
A+ K + F+GAD+ +C A +AIR E
Sbjct: 678 ALAKYTQGFSGADITEICQRACKYAIRENIE 708
>sp|Q9SCN8|CD48D_ARATH Cell division control protein 48 homolog D OS=Arabidopsis thaliana
GN=CDC48D PE=1 SV=1
Length = 815
Score = 330 bits (846), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 202/546 (36%), Positives = 305/546 (55%), Gaps = 55/546 (10%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++ Y +GG+ +Q+ ++RE++ELPL +P+LF+ +G+ PPKG LLYGPPG+GKTL+ARAVA
Sbjct: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
Query: 227 SQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESAR 286
++ A F F I+ K GES
Sbjct: 264 NETGAFF-----------------------------------FCINGPEIMSKLAGESES 288
Query: 287 LIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQV 346
+R+ F A + P IIF+DEID+I +R E T + E +R + +LL MDG S V
Sbjct: 289 NLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKSRAHV 345
Query: 347 KMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEA 406
++ ATNRP+++DPAL R GR DR+I+I +P+E RL + IH + ++D E
Sbjct: 346 IVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEV---LRIHTKNMKLAEDVDLER 402
Query: 407 VVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEA 466
V K + + GADL +CTEA L IR + + + +D + + N + ++T
Sbjct: 403 VSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDD--EEIDAEILNSMAVSNDHFQTAL 460
Query: 467 GLFAIRSEREYVTQEDFMKAVRKVS--DNKKLES-KLDYKPVIELPLLNPELFQRVGITP 523
G + RE V + V VS D LE+ K + + ++ P+ +PE F++ G++P
Sbjct: 461 GNSNPSALRETVVE------VPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 514
Query: 524 PKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQ 583
KG L YGPPG GKTLLA+A+A++ ANF+ + ++ + GES +RE+F+ AR
Sbjct: 515 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSA 574
Query: 584 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLD 643
PC++F DE+D+I +R + A R L +LL +MDG ++ V +I ATNRPD +D
Sbjct: 575 PCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIID 634
Query: 644 PALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAKHGEIGDAATKWVLPFTAGGFIY 701
PALLRPGRLD+ I IPLP+E++R +I K + P+AK ++ A K+ F+
Sbjct: 635 PALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDL-RALAKYTQGFSGADITE 693
Query: 702 IATVSV 707
I S
Sbjct: 694 ICQRSC 699
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 151/270 (55%), Gaps = 38/270 (14%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++++ IGGL REL+E ++ P+ +PE F++ G++P KG L YGPPG GKTLLA+A+A
Sbjct: 477 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
Query: 227 SQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESAR 286
++ ANF+ + +T + GES
Sbjct: 537 NECQANFISIKGPELLT-----------------------------------MWFGESEA 561
Query: 287 LIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQV 346
+RE+F+ AR PC++F DE+D+I +R + A R L +LL +MDG ++ V
Sbjct: 562 NVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTV 621
Query: 347 KMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEA 406
+I ATNRPD +DPALLRPGRLD+ I IPLP+E++R + + P+AK ++D A
Sbjct: 622 FIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRY-QIFKSCLRKSPVAK--DVDLRA 678
Query: 407 VVKLSDSFNGADLRNVCTEAGLFAIRSERE 436
+ K + F+GAD+ +C + +AIR E
Sbjct: 679 LAKYTQGFSGADITEICQRSCKYAIRENIE 708
>sp|P25694|CDC48_YEAST Cell division control protein 48 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC48 PE=1 SV=3
Length = 835
Score = 326 bits (835), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 199/564 (35%), Positives = 311/564 (55%), Gaps = 58/564 (10%)
Query: 144 TIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGIT 203
TI+ + E +P+ + ++ Y IGG +Q+ ++RE++ELPL +P+LF+ +GI
Sbjct: 190 TIIHW---EGEPINREDEENNMNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIK 246
Query: 204 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHH 263
PP+G L+YGPPGTGKTL+ARAVA++ A F
Sbjct: 247 PPRGVLMYGPPGTGKTLMARAVANETGAFF------------------------------ 276
Query: 264 LEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSAD 323
F ++ K GES +R+ F A + P IIF+DEID+I +R +
Sbjct: 277 -----FLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKTNGEVE 331
Query: 324 REIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARL 383
R R + +LL MDG + V +I ATNRP+++DPAL R GR DR+++I +P+ RL
Sbjct: 332 R---RVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRL 388
Query: 384 AHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVT-QED 442
+ IH + ++D EA+ + + GAD+ ++C+EA + IR + + + ED
Sbjct: 389 E---VLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDED 445
Query: 443 FMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKL--ESKL 500
+ A +V D+ + N +R FA+ + +E +++V D+ E K
Sbjct: 446 EIDA--EVLDSLGVTMDN-FR-----FALGNSNPSALRETVVESVNVTWDDVGGLDEIKE 497
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ K +E P+L+P+ + + G++P KG L YGPPGTGKTLLA+AVA+++ ANF+ V +
Sbjct: 498 ELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPEL 557
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
+ + GES IR++F+ AR P ++F+DE+D+I R A R + +LL +
Sbjct: 558 LSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTE 617
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEIL--KIHAGPIA 678
MDG ++ V +I ATNRPD +DPA+LRPGRLD+ I +PLP+E ARL IL ++ P+
Sbjct: 618 MDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLE 677
Query: 679 KHGEIGDAATKWVLPFTAGGFIYI 702
E+ A K F+ +YI
Sbjct: 678 PGLEL-TAIAKATQGFSGADLLYI 700
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 177/337 (52%), Gaps = 59/337 (17%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++T+ +GGL E EL+E +E P+L+P+ + + G++P KG L YGPPGTGKTLLA+AVA
Sbjct: 483 NVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVA 542
Query: 227 SQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESAR 286
+++ ANF+ V ++ + GES
Sbjct: 543 TEVSANFISV-----------------------------------KGPELLSMWYGESES 567
Query: 287 LIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQV 346
IR++F+ AR P ++F+DE+D+I R A R + +LL +MDG ++ V
Sbjct: 568 NIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNV 627
Query: 347 KMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEA 406
+I ATNRPD +DPA+LRPGRLD+ I +PLP+E ARL+ + P+ E+ A
Sbjct: 628 FVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLS-ILNAQLRKTPLEPGLEL--TA 684
Query: 407 VVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEA 466
+ K + F+GADL + A +AI+ E Q + K V+ ++ ++ T+
Sbjct: 685 IAKATQGFSGADLLYIVQRAAKYAIKDSIEAHRQHEAEKEVKVEGEDVEM-------TDE 737
Query: 467 GLFAIRSERE-------YVTQEDFMKAV----RKVSD 492
G ++E+E Y+T+E F +A+ R VSD
Sbjct: 738 G---AKAEQEPEVDPVPYITKEHFAEAMKTAKRSVSD 771
>sp|Q8U4H3|PAN_PYRFU Proteasome-activating nucleotidase OS=Pyrococcus furiosus (strain
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pan PE=3 SV=1
Length = 396
Score = 326 bits (835), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 170/348 (48%), Positives = 223/348 (64%), Gaps = 39/348 (11%)
Query: 108 IVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGD 167
IV+ NGPR+VV +DK+KL+ GTRVALD T+ I+ LP DP V + +
Sbjct: 74 IVQNYNGPRFVVRIAPWIDKSKLRPGTRVALDQRTMAIIEILPASKDPAVLGFEVVERPN 133
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+TY+ IGGL +Q++ELRE IELPL +PELF+ VGI PPKG LLYGPPG GKTL+A+A+A
Sbjct: 134 VTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAH 193
Query: 228 QLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARL 287
+++A F++VV S +V KYIGE ARL
Sbjct: 194 EVNATFIRVVGS-----------------------------------ELVRKYIGEGARL 218
Query: 288 IREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVK 347
+ E+F A+ P IIF+DEIDAIG +R E T +RE+ RTLM+LL +MDGFD G VK
Sbjct: 219 VHELFELAKEKAPTIIFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFDPRGNVK 278
Query: 348 MIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAV 407
+I ATNRPD LDPALLRPGR DR IE+PLP+ + RL + +H + G +D +
Sbjct: 279 VIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEI---LKVHTRRMKLRG-VDLRLI 334
Query: 408 VKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 455
+L++ +GADL+ + TEAG+FAIR R YVTQEDF+KA+ KV N+K
Sbjct: 335 AELTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAIDKVLGNEK 382
Score = 234 bits (598), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 108/173 (62%), Positives = 135/173 (78%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + IELPL +PELF+ VGI PPKG LLYGPPG GKTL+A+A+A +++A F++VV S +
Sbjct: 148 ELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSEL 207
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V KYIGE ARL+ E+F A+ P IIF+DEIDAIG +R E T +RE+ RTLM+LL +
Sbjct: 208 VRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAE 267
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
MDGFD G VK+I ATNRPD LDPALLRPGR DR IE+PLP+ + RLEILK+H
Sbjct: 268 MDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVH 320
>sp|O28303|PAN_ARCFU Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=pan PE=1 SV=1
Length = 398
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 165/356 (46%), Positives = 224/356 (62%), Gaps = 38/356 (10%)
Query: 95 VSLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVD 154
V + + + + V+VK++ GP++VV + +++ +LK G RVAL+ TL I+ LP D
Sbjct: 65 VGVVSDILEDGRVVVKSSTGPKFVVNTSQYINEEELKPGARVALNQQTLAIVNVLPTSKD 124
Query: 155 PLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPP 214
P+VY E+ +++Y IGGL QI E+RE +ELPLL PELF VGI PPKG LLYGPP
Sbjct: 125 PMVYGFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPP 184
Query: 215 GTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSS 274
GTGKTLLA+AVA+Q A F++VV S FV
Sbjct: 185 GTGKTLLAKAVANQTRATFIRVVGSEFV-------------------------------- 212
Query: 275 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 334
KYIGE ARL+RE+F A+ P IIF+DE+DAI RR + TS DRE+QRT+M+LL
Sbjct: 213 ---QKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLL 269
Query: 335 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAG 394
++DGFD G VK+I ATNR D LDPA+LRPGR DR IE+PLP + R+ IH
Sbjct: 270 AELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQI---FKIHTR 326
Query: 395 PIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKV 450
+ ++D++ + ++++ +GAD++ +CTEAG+FAIR ER VT DF KA+ KV
Sbjct: 327 KMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDFTKAIEKV 382
Score = 232 bits (591), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 108/168 (64%), Positives = 130/168 (77%)
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
+ELPLL PELF VGI PPKG LLYGPPGTGKTLLA+AVA+Q A F++VV S V KYI
Sbjct: 157 VELPLLKPELFAEVGIEPPKGVLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYI 216
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 625
GE ARL+RE+F A+ P IIF+DE+DAI RR + TS DRE+QRT+M+LL ++DGFD
Sbjct: 217 GEGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFD 276
Query: 626 SLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
G VK+I ATNR D LDPA+LRPGR DR IE+PLP + R++I KIH
Sbjct: 277 PRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIH 324
>sp|O57940|PAN_PYRHO Proteasome-activating nucleotidase OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=pan PE=3 SV=1
Length = 399
Score = 324 bits (830), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 168/348 (48%), Positives = 223/348 (64%), Gaps = 39/348 (11%)
Query: 108 IVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGD 167
IV+ NGPR+VV +D+ KL+ GTRVALD T+ ++ LP DP V + +
Sbjct: 77 IVQNYNGPRFVVRIAPWIDRKKLRPGTRVALDQRTMAVVEILPTSKDPTVLGFEVIERPN 136
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+TY+ IGGL +Q++ELRE IELPL +PELF+ VGI PPKG LLYGPPG GKTL+A+A+A
Sbjct: 137 VTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAH 196
Query: 228 QLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARL 287
+++A F++VV S +V KYIGE ARL
Sbjct: 197 EVNATFIRVVGS-----------------------------------ELVRKYIGEGARL 221
Query: 288 IREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVK 347
+ E+F A+ P IIF+DEIDAIG +R E T +RE+ RTLM+LL +MDGFD G VK
Sbjct: 222 VHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVK 281
Query: 348 MIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAV 407
+I ATNRPD LDPALLRPGR DR IE+PLP+ + RL + +H + G +D A+
Sbjct: 282 VIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEI---LKVHTRRMKLKG-VDLRAI 337
Query: 408 VKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 455
++++ +GADL+ + TEAG+FAIR R YVTQEDF+KAV KV N++
Sbjct: 338 AEMTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNER 385
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 108/173 (62%), Positives = 135/173 (78%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + IELPL +PELF+ VGI PPKG LLYGPPG GKTL+A+A+A +++A F++VV S +
Sbjct: 151 ELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSEL 210
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V KYIGE ARL+ E+F A+ P IIF+DEIDAIG +R E T +RE+ RTLM+LL +
Sbjct: 211 VRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAE 270
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
MDGFD G VK+I ATNRPD LDPALLRPGR DR IE+PLP+ + RLEILK+H
Sbjct: 271 MDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVH 323
>sp|Q8TX03|PAN_METKA Proteasome-activating nucleotidase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pan PE=3
SV=1
Length = 436
Score = 323 bits (829), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 181/446 (40%), Positives = 263/446 (58%), Gaps = 54/446 (12%)
Query: 14 LQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQLK 73
L++Y K+L E +E +LR E+L+ ++ E +L+ + +RE+L+
Sbjct: 30 LKEYFKRLEE---LERKLRAHEEKLRIEARRRKTLEKELEMERDEKAE------LREELR 80
Query: 74 ELTKQYDKSENDLKALQS----VGQVSLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAK 129
+K +DL+ ++ VG V + VIVK++ GP++V +D+ +
Sbjct: 81 RKEVMIEKLRSDLQRMKKPPLIVGTVE---EILDDGRVIVKSSTGPKFVSNVSPTVDRNE 137
Query: 130 LKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIEL 189
L+ G VAL+ ++ ++ LP E D V M ++ D++Y IGGL EQIRE+REV+E
Sbjct: 138 LEPGANVALNQQSMAVVDVLPSEKDSRVLAMEVDESPDVSYDDIGGLDEQIREIREVVEK 197
Query: 190 PLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMA 249
PL PELF++VG+ PPKG LLYGPPGTGKTLLA+AVA+ DA F+++ +
Sbjct: 198 PLKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAKAVANHADATFIRLAAP---------- 247
Query: 250 ILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEID 309
+V K+IGE ARL+RE+F AR P IIF+DEID
Sbjct: 248 -------------------------ELVQKFIGEGARLVRELFELAREKAPSIIFIDEID 282
Query: 310 AIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLD 369
AIG RR + TS DRE+QRTL +LL +MDGFD L +K+I ATNR D LDPALLRPGR D
Sbjct: 283 AIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFD 342
Query: 370 RKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLF 429
R I+IPLP+E+ R IH + ++D + + K+++ +GAD++ +CTEAG+
Sbjct: 343 RHIKIPLPDEEGRYEI---FKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMM 399
Query: 430 AIRSEREYVTQEDFMKAVRKVSDNKK 455
AIR +R+ VT +DF+KAV +V K+
Sbjct: 400 AIREDRDIVTMDDFLKAVDRVMGKKE 425
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 108/173 (62%), Positives = 134/173 (77%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + V+E PL PELF++VG+ PPKG LLYGPPGTGKTLLA+AVA+ DA F+++ + +
Sbjct: 190 EIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAKAVANHADATFIRLAAPEL 249
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V K+IGE ARL+RE+F AR P IIF+DEIDAIG RR + TS DRE+QRTL +LL +
Sbjct: 250 VQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAE 309
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
MDGFD L +K+I ATNR D LDPALLRPGR DR I+IPLP+E+ R EI KIH
Sbjct: 310 MDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIH 362
>sp|Q8NB90|SPAT5_HUMAN Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1
SV=3
Length = 893
Score = 322 bits (825), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 209/542 (38%), Positives = 293/542 (54%), Gaps = 102/542 (18%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+TY IGGLS Q++ +RE+IELPL PELF+ GI P+G LLYGPPGTGKT++ARAVA+
Sbjct: 350 VTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVAN 409
Query: 228 QLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARL 287
++ A ++ V++ I+ K+ GE+
Sbjct: 410 EVGA-YVSVING----------------------------------PEIISKFYGETEAK 434
Query: 288 IREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSL---G 344
+R++F A P IIF+DE+DA+ +R EG + E +R + LL MDG S G
Sbjct: 435 LRQIFAEATLRHPSIIFIDELDALCPKR--EGAQNEVE-KRVVASLLTLMDGIGSEVSEG 491
Query: 345 QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDY 404
QV ++ ATNRP LD AL RPGR D++IEI +PN Q RL + + E+
Sbjct: 492 QVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEAEL-- 549
Query: 405 EAVVKLSDS---FNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNS 461
++L++S + GADL+ +C EAGL A+R +K + D K
Sbjct: 550 ---LQLANSAHGYVGADLKVLCNEAGLCALRR---------ILKKQPNLPDVKV------ 591
Query: 462 YRTEAGLFAIRSEREYVTQEDFMKAVRKV-----------------SDNKKLES-KLDYK 503
AGL I T +DF++A+ + SD LES KL +
Sbjct: 592 ----AGLVKI-------TLKDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGLESIKLKLE 640
Query: 504 PVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 563
+E PL +PE F R+GI PPKG LLYGPPG KT++A+A+A++ NFL + +++K
Sbjct: 641 QAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNK 700
Query: 564 YIGESARLIREMFNYARNHQPCIIFMDEIDAIG---GRRFSEGTSADREIQRTLMELLNQ 620
Y+GES R +RE F AR P IIF DE+DA+ G G AD R L +LL +
Sbjct: 701 YVGESERAVRETFRKARAVAPSIIFFDELDALAVERGSSLGAGNVAD----RVLAQLLTE 756
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKI--HAGPIA 678
MDG + L V ++ ATNRPD +D AL+RPGR+DR I +PLP+ R EI K+ H+ P++
Sbjct: 757 MDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVS 816
Query: 679 KH 680
Sbjct: 817 NE 818
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 158/293 (53%), Gaps = 47/293 (16%)
Query: 164 DPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLAR 223
D ++++S IGGL +L + +E PL +PE F R+GI PPKG LLYGPPG KT++A+
Sbjct: 620 DVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAK 679
Query: 224 AVASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGE 283
A+A++ NFL + +++KY+GE
Sbjct: 680 ALANESGLNFLAI-----------------------------------KGPELMNKYVGE 704
Query: 284 SARLIREMFNYARNHQPCIIFMDEIDAIG---GRRFSEGTSADREIQRTLMELLNQMDGF 340
S R +RE F AR P IIF DE+DA+ G G ADR L +LL +MDG
Sbjct: 705 SERAVRETFRKARAVAPSIIFFDELDALAVERGSSLGAGNVADR----VLAQLLTEMDGI 760
Query: 341 DSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHG 400
+ L V ++ ATNRPD +D AL+RPGR+DR I +PLP+ R + + H+ P++
Sbjct: 761 EQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATR-REIFKLQFHSMPVSN-- 817
Query: 401 EIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRS--EREYVTQEDFMKAVRKVS 451
E+D + ++ +D+++GA++ VC EA L A+ + + + F +A+ V+
Sbjct: 818 EVDLDELILQTDAYSGAEIVAVCREAALLALEEDIQANLIMKRHFTQALSTVT 870
>sp|A3CV35|PAN_METMJ Proteasome-activating nucleotidase OS=Methanoculleus marisnigri
(strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1
Length = 412
Score = 322 bits (824), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 175/372 (47%), Positives = 228/372 (61%), Gaps = 40/372 (10%)
Query: 99 TSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVY 158
T V VIV+++ GPR++V + +D LK G R L+ +L I+ LP D +Y
Sbjct: 81 TDVIDNSRVIVRSSAGPRFLVRTSQLIDPDLLKPGVRCTLNQQSLAIVDVLPTSYDAQIY 140
Query: 159 NMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGK 218
M + + TY IGGL QI E+RE +ELPL P+LF++VGI+PPKG LLYGPPGTGK
Sbjct: 141 GMELVESPEETYENIGGLEPQIEEIREAVELPLTKPQLFEKVGISPPKGVLLYGPPGTGK 200
Query: 219 TLLARAVASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVD 278
TLLARAVA Q +A+FL+VV S +V
Sbjct: 201 TLLARAVAHQTNAHFLRVVGS-----------------------------------ELVQ 225
Query: 279 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 338
KYIGE ARL+RE+F+ A+ P IIF+DEIDAIG R TS DRE+QRTLM+LL +MD
Sbjct: 226 KYIGEGARLVRELFDLAKQRAPSIIFIDEIDAIGAHRNDSTTSGDREVQRTLMQLLAEMD 285
Query: 339 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAK 398
GFD+ G VK++ ATNR D LD ALLRPGR DR IEIPLP+ Q RLA + IH +
Sbjct: 286 GFDNRGDVKIVAATNRIDILDRALLRPGRFDRMIEIPLPDHQGRLA---ILKIHTQYMNI 342
Query: 399 HGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDH 458
+++ V +L++ NGADLR +C EAG+FAIR ER+ V EDFMKA+ K++ + D
Sbjct: 343 GEDVNLSEVSRLTEGKNGADLRAICMEAGMFAIRMERDAVNSEDFMKAIDKLALD--FDR 400
Query: 459 CNSYRTEAGLFA 470
+ + T +FA
Sbjct: 401 HHFHTTFGEMFA 412
Score = 241 bits (615), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 114/173 (65%), Positives = 137/173 (79%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + +ELPL P+LF++VGI+PPKG LLYGPPGTGKTLLARAVA Q +A+FL+VV S +
Sbjct: 164 EIREAVELPLTKPQLFEKVGISPPKGVLLYGPPGTGKTLLARAVAHQTNAHFLRVVGSEL 223
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V KYIGE ARL+RE+F+ A+ P IIF+DEIDAIG R TS DRE+QRTLM+LL +
Sbjct: 224 VQKYIGEGARLVRELFDLAKQRAPSIIFIDEIDAIGAHRNDSTTSGDREVQRTLMQLLAE 283
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
MDGFD+ G VK++ ATNR D LD ALLRPGR DR IEIPLP+ Q RL ILKIH
Sbjct: 284 MDGFDNRGDVKIVAATNRIDILDRALLRPGRFDRMIEIPLPDHQGRLAILKIH 336
>sp|A9A916|PAN_METM6 Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1
Length = 407
Score = 322 bits (824), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 163/348 (46%), Positives = 223/348 (64%), Gaps = 39/348 (11%)
Query: 108 IVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGD 167
+VK++ GP ++V + +D + G RV L+ TL I+ LP+E D M E+ D
Sbjct: 85 VVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPD 144
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
I++ IGGL+ QIR+++EV+ELPL NPELF++VGI PPKG LLYGPPGTGKTLLA+AVA
Sbjct: 145 ISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAY 204
Query: 228 QLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARL 287
+ +A+F++VV S +V K+IGE A+L
Sbjct: 205 ETNASFVRVVGS-----------------------------------ELVKKFIGEGAKL 229
Query: 288 IREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVK 347
+R++F A+ PCIIF+DEIDA+ +R T DRE+QRTLM+LL +MDGFDS G VK
Sbjct: 230 VRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVK 289
Query: 348 MIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAV 407
+I ATNRPD LDPA+LRPGR DR IEI +P+E RL + IH + G +D V
Sbjct: 290 IIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDI---LKIHTEKMNLKG-VDLREV 345
Query: 408 VKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 455
KL+++ GADL+ VCTEAG+FAIR ERE++ +DF +A+ K++ K+
Sbjct: 346 AKLAENMVGADLKAVCTEAGMFAIREEREFIKMDDFKEAISKITGKKE 393
Score = 245 bits (625), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 112/173 (64%), Positives = 139/173 (80%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
D K V+ELPL NPELF++VGI PPKG LLYGPPGTGKTLLA+AVA + +A+F++VV S +
Sbjct: 159 DIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSEL 218
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V K+IGE A+L+R++F A+ PCIIF+DEIDA+ +R T DRE+QRTLM+LL +
Sbjct: 219 VKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAE 278
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
MDGFDS G VK+I ATNRPD LDPA+LRPGR DR IEI +P+E RL+ILKIH
Sbjct: 279 MDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIH 331
>sp|Q3UMC0|SPAT5_MOUSE Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2
SV=2
Length = 893
Score = 321 bits (823), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 202/524 (38%), Positives = 294/524 (56%), Gaps = 66/524 (12%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+TY IGGL+ Q++ +RE+IELPL PELF+ GI P+G LLYGPPGTGKT++ARAVA+
Sbjct: 350 VTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409
Query: 228 QLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARL 287
++ A ++ V++ I+ K+ GE+
Sbjct: 410 EVGA-YVSVING----------------------------------PEIISKFYGETEAR 434
Query: 288 IREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLG--- 344
+R++F A P IIF+DE+DA+ +R EG ++ E +R + LL MDG S G
Sbjct: 435 LRQIFAEATLRHPSIIFIDELDALCPKR--EGAQSEVE-KRVVASLLTLMDGIGSEGSEG 491
Query: 345 QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDY 404
+V ++ ATNRP LD AL RPGR D++IEI +PN Q RL + + E+
Sbjct: 492 RVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLLTKAEL-- 549
Query: 405 EAVVKLSDS---FNGADLRNVCTEAGLFAIRS--EREYVTQEDFMKAVRKVSDNKKLDHC 459
++L+++ + GADL+ +C EAGL A+R ++ + + + K++ N L
Sbjct: 550 ---LRLANNAHGYVGADLKALCNEAGLHALRRVLRKQPNLPDSKVAGMVKITLNDFLQGM 606
Query: 460 NSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLES-KLDYKPVIELPLLNPELFQR 518
N R A +R V + SD LE+ KL K +E PL +P+ F R
Sbjct: 607 NDIRPSA----MREVAIDVPNVSW-------SDIGGLENIKLKLKQAVEWPLKHPKSFNR 655
Query: 519 VGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNY 578
+GI PPKG LLYGPPG KT++A+A+A++ NFL + +++KY+GES R +RE+F
Sbjct: 656 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRK 715
Query: 579 ARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNR 638
AR P IIF DE+DA+ R S + A R L +LL +MDG + L V ++ ATNR
Sbjct: 716 ARAVAPSIIFFDELDALAVERGSS-SGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNR 774
Query: 639 PDTLDPALLRPGRLDRKIEIPLPNEQARLEILKI--HAGPIAKH 680
PD +D AL+RPGR+DR I +PLP+ R EIL + H+ PI+
Sbjct: 775 PDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNE 818
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 177/334 (52%), Gaps = 44/334 (13%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTIMRYLP--REVDPLVYNMSHEDPGDITYSAIGGLSEQ 179
RR L K ++VA M +T+ +L ++ P D ++++S IGGL
Sbjct: 577 RRVLRKQPNLPDSKVA-GMVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENI 635
Query: 180 IRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 239
+L++ +E PL +P+ F R+GI PPKG LLYGPPG KT++A+A+A++ NFL +
Sbjct: 636 KLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAI--- 692
Query: 240 LFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQ 299
+++KY+GES R +RE+F AR
Sbjct: 693 --------------------------------KGPELMNKYVGESERAVREIFRKARAVA 720
Query: 300 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLD 359
P IIF DE+DA+ R S + A R L +LL +MDG + L V ++ ATNRPD +D
Sbjct: 721 PSIIFFDELDALAVERGSS-SGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRID 779
Query: 360 PALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADL 419
AL+RPGR+DR I +PLP+ R + H+ PI+ E+D + +V +D+++GA++
Sbjct: 780 KALMRPGRIDRIIYVPLPDAATR-REILNLQFHSMPISN--EVDLDELVLQTDTYSGAEI 836
Query: 420 RNVCTEAGLFAIRS--EREYVTQEDFMKAVRKVS 451
VC EA L A+ + + + + F +A+ V+
Sbjct: 837 IAVCKEAALLALEENIKADCIMKRHFTQALSIVT 870
>sp|Q6LWR0|PAN_METMP Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain S2 / LL) GN=pan PE=3 SV=1
Length = 407
Score = 321 bits (823), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 162/348 (46%), Positives = 223/348 (64%), Gaps = 39/348 (11%)
Query: 108 IVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGD 167
+VK++ GP ++V + +D + G RV L+ TL I+ LP+E D M E+ D
Sbjct: 85 VVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPD 144
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
I++ IGGL+ QIR+++EV+ELPL NPELF++VGI PPKG LLYGPPGTGKTLLA+AVA
Sbjct: 145 ISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAY 204
Query: 228 QLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARL 287
+ +A+F++VV S +V K+IGE A+L
Sbjct: 205 ETNASFVRVVGS-----------------------------------ELVKKFIGEGAKL 229
Query: 288 IREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVK 347
+R++F A+ PCIIF+DEIDA+ +R T DRE+QRTLM+LL +MDGFDS G VK
Sbjct: 230 VRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVK 289
Query: 348 MIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAV 407
+I ATNRPD LDPA+LRPGR DR IEI +P+E RL + IH + G +D V
Sbjct: 290 IIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEI---LKIHTEKMNLKG-VDLREV 345
Query: 408 VKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 455
K++++ GADL+ VCTEAG+FAIR ERE++ +DF +A+ K++ K+
Sbjct: 346 AKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFREAISKITGKKE 393
Score = 246 bits (629), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 113/173 (65%), Positives = 139/173 (80%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
D K V+ELPL NPELF++VGI PPKG LLYGPPGTGKTLLA+AVA + +A+F++VV S +
Sbjct: 159 DIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSEL 218
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V K+IGE A+L+R++F A+ PCIIF+DEIDA+ +R T DRE+QRTLM+LL +
Sbjct: 219 VKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAE 278
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
MDGFDS G VK+I ATNRPD LDPA+LRPGR DR IEI +P+E RLEILKIH
Sbjct: 279 MDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIH 331
>sp|Q6GL04|TERA_XENTR Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis
GN=vcp PE=2 SV=1
Length = 805
Score = 321 bits (822), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 193/534 (36%), Positives = 293/534 (54%), Gaps = 56/534 (10%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 212 GPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPF 271
GPPGTGKTL+ARAVA++ A F F
Sbjct: 245 GPPGTGKTLIARAVANETGAFF-----------------------------------FLI 269
Query: 272 YSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM 331
I+ K GES +R+ F A + P IIF+DE+DAI +R E T + E +R +
Sbjct: 270 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVS 326
Query: 332 ELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISI 391
+LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RL + I
Sbjct: 327 QLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEI---LQI 383
Query: 392 HAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQED-FMKAVRKV 450
H + ++D E V + GADL +C+EA L AIR + + + ED + A
Sbjct: 384 HTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMN 443
Query: 451 SDNKKLDHCNSYRTEAGLFAIRS---EREYVTQEDFMKAVRKVSDNKKLESKLDYKPVIE 507
S +D +++ A+R E VT ED + + D K+ + + +++
Sbjct: 444 SLAVTMDDFRWALSQSNPSALRETVVEVPQVTWED----IGGLEDVKR-----ELQELVQ 494
Query: 508 LPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGE 567
P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ + ++ + GE
Sbjct: 495 YPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 554
Query: 568 SARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSL 627
S +RE+F+ AR PC++F DE+D+I R R + ++L +MDG +
Sbjct: 555 SEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTK 614
Query: 628 GQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAK 679
V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E++R+ ILK + P+AK
Sbjct: 615 KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPVAK 668
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 169/315 (53%), Gaps = 42/315 (13%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 177
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 178 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 237
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
Query: 238 SSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARN 297
+T + GES +RE+F+ AR
Sbjct: 544 GPELLTM-----------------------------------WFGESEANVREIFDKARQ 568
Query: 298 HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDT 357
PC++F DE+D+I R R + ++L +MDG + V +I ATNRPD
Sbjct: 569 AAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDI 628
Query: 358 LDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGA 417
+DPA+LRPGRLD+ I IPLP+E++R+A ++ P+AK ++D+ + K+++ F+GA
Sbjct: 629 IDPAILRPGRLDQLIYIPLPDEKSRIA-ILKANLRKSPVAKDVDLDF--LAKMTNGFSGA 685
Query: 418 DLRNVCTEAGLFAIR 432
DL +C A AIR
Sbjct: 686 DLTEICQRACKLAIR 700
>sp|Q7ZU99|TERA_DANRE Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp
PE=1 SV=1
Length = 806
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 193/534 (36%), Positives = 294/534 (55%), Gaps = 56/534 (10%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ E ++ Y IGG+ +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 212 GPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPF 271
GPPGTGKTL+ARAVA++ A F F
Sbjct: 245 GPPGTGKTLIARAVANETGAFF-----------------------------------FLI 269
Query: 272 YSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM 331
I+ K GES +R+ F A + P IIF+DE+DAI +R E T + E +R +
Sbjct: 270 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVS 326
Query: 332 ELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISI 391
+LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RL + I
Sbjct: 327 QLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI---LQI 383
Query: 392 HAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQED-FMKAVRKV 450
H + ++D E V + GADL +C+EA L AIR + + + ED + A
Sbjct: 384 HTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMN 443
Query: 451 SDNKKLDHCNSYRTEAGLFAIRS---EREYVTQEDFMKAVRKVSDNKKLESKLDYKPVIE 507
S +D +++ A+R E +T ED + + D K+ + + +++
Sbjct: 444 SLAVTMDDFRWALSQSNPSALRETVVEVPNITWED----IGGLDDVKR-----ELQELVQ 494
Query: 508 LPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGE 567
P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ + ++ + GE
Sbjct: 495 YPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 554
Query: 568 SARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSL 627
S +RE+F+ AR PC++F DE+D+I R R + ++L +MDG S
Sbjct: 555 SEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSK 614
Query: 628 GQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAK 679
V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E++R+ ILK + PI+K
Sbjct: 615 KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPISK 668
Score = 189 bits (481), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 108/315 (34%), Positives = 170/315 (53%), Gaps = 42/315 (13%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 177
R+++D L+ T A M +L + R+ + +P + + +IT+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWEDIGGLD 483
Query: 178 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 237
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
Query: 238 SSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARN 297
+T + GES +RE+F+ AR
Sbjct: 544 GPELLT-----------------------------------MWFGESEANVREIFDKARQ 568
Query: 298 HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDT 357
PC++F DE+D+I R R + ++L +MDG S V +I ATNRPD
Sbjct: 569 AAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDI 628
Query: 358 LDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGA 417
+DPA+LRPGRLD+ I IPLP+E++R+A ++ PI+K ++D+ + K+++ F+GA
Sbjct: 629 IDPAILRPGRLDQLIYIPLPDEKSRIA-ILKANLRKSPISKDVDLDF--LAKMTNGFSGA 685
Query: 418 DLRNVCTEAGLFAIR 432
DL +C A AIR
Sbjct: 686 DLTEICQRACKLAIR 700
Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 131/206 (63%), Gaps = 6/206 (2%)
Query: 471 IRSEREYVTQEDFMKAVRKVS--DNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGC 527
I E E + +ED +++ +V D + +L K ++ELPL +P LF+ +G+ PP+G
Sbjct: 182 IHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGI 241
Query: 528 LLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCII 587
LLYGPPGTGKTL+ARAVA++ A F + I+ K GES +R+ F A + P II
Sbjct: 242 LLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAII 301
Query: 588 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALL 647
F+DE+DAI +R E T + E +R + +LL MDG V ++ ATNRP+++DPAL
Sbjct: 302 FIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALR 358
Query: 648 RPGRLDRKIEIPLPNEQARLEILKIH 673
R GR DR+++I +P+ RLEIL+IH
Sbjct: 359 RFGRFDREVDIGIPDATGRLEILQIH 384
>sp|A6VHR1|PAN_METM7 Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1
Length = 407
Score = 320 bits (820), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 162/352 (46%), Positives = 223/352 (63%), Gaps = 47/352 (13%)
Query: 108 IVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGD 167
+VK++ GP ++V + +D + G RV L+ TL I+ LP+E D M E+ D
Sbjct: 85 VVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPD 144
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
I++ IGGL+ QIR+++EV+ELPL NPELF++VGI PPKG LLYGPPGTGKTLLA+AVA
Sbjct: 145 ISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAY 204
Query: 228 QLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARL 287
+ +A+F++VV S +V K+IGE A+L
Sbjct: 205 ETNASFVRVVGS-----------------------------------ELVKKFIGEGAKL 229
Query: 288 IREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVK 347
+R++F A+ PCIIF+DEIDA+ +R T DRE+QRTLM+LL +MDGFDS G VK
Sbjct: 230 VRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVK 289
Query: 348 MIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLA----HTWPISIHAGPIAKHGEID 403
+I ATNRPD LDPA+LRPGR DR IEI +P+E RL HT +++ +D
Sbjct: 290 IIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNLK--------NVD 341
Query: 404 YEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 455
V KL+++ GADL+ VCTEAG+FAIR ERE++ +DF +A+ K++ K+
Sbjct: 342 LREVAKLAENMVGADLKAVCTEAGMFAIREEREFIKMDDFKEAISKITGKKE 393
Score = 246 bits (629), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 113/174 (64%), Positives = 139/174 (79%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
D K V+ELPL NPELF++VGI PPKG LLYGPPGTGKTLLA+AVA + +A+F++VV S +
Sbjct: 159 DIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSEL 218
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V K+IGE A+L+R++F A+ PCIIF+DEIDA+ +R T DRE+QRTLM+LL +
Sbjct: 219 VKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAE 278
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
MDGFDS G VK+I ATNRPD LDPA+LRPGR DR IEI +P+E RLEILKIH
Sbjct: 279 MDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHT 332
>sp|A4G0S4|PAN_METM5 Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1
Length = 407
Score = 320 bits (820), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 162/348 (46%), Positives = 223/348 (64%), Gaps = 39/348 (11%)
Query: 108 IVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGD 167
+VK++ GP ++V + +D + G RV L+ TL I+ LP+E D M E+ D
Sbjct: 85 VVKSSTGPNFLVNLSQFVDPDDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPD 144
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
I++ IGGL+ QIR+++EV+ELPL NPELF++VGI PPKG LLYGPPGTGKTLLA+AVA
Sbjct: 145 ISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAY 204
Query: 228 QLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARL 287
+ +A+F++VV S +V K+IGE A+L
Sbjct: 205 ETNASFVRVVGS-----------------------------------ELVKKFIGEGAKL 229
Query: 288 IREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVK 347
+R++F A+ PCIIF+DEIDA+ +R T DRE+QRTLM+LL +MDGFDS G VK
Sbjct: 230 VRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVK 289
Query: 348 MIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAV 407
+I ATNRPD LDPA+LRPGR DR IEI +P+E RL + IH + G +D V
Sbjct: 290 IIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDI---LKIHTEKMNLKG-VDLREV 345
Query: 408 VKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 455
K++++ GADL+ VCTEAG+FAIR ERE++ +DF +A+ K++ K+
Sbjct: 346 AKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFREAITKITGKKE 393
Score = 245 bits (625), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 112/174 (64%), Positives = 139/174 (79%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
D K V+ELPL NPELF++VGI PPKG LLYGPPGTGKTLLA+AVA + +A+F++VV S +
Sbjct: 159 DIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSEL 218
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V K+IGE A+L+R++F A+ PCIIF+DEIDA+ +R T DRE+QRTLM+LL +
Sbjct: 219 VKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAE 278
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
MDGFDS G VK+I ATNRPD LDPA+LRPGR DR IEI +P+E RL+ILKIH
Sbjct: 279 MDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHT 332
>sp|P32794|AFG2_YEAST ATPase family gene 2 protein OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=AFG2 PE=1 SV=1
Length = 780
Score = 320 bits (820), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 201/522 (38%), Positives = 292/522 (55%), Gaps = 69/522 (13%)
Query: 159 NMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGK 218
N + P ++Y+A+GGL ++I L+ IE+PL P LF G++PP+G LL+GPPGTGK
Sbjct: 233 NRKYNLPEPLSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGK 292
Query: 219 TLLARAVASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVD 278
T+L R VA+ +A+ L + +IV
Sbjct: 293 TMLLRVVANTSNAHVLTI-----------------------------------NGPSIVS 317
Query: 279 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ-RTLMELLNQM 337
KY+GE+ +R++FN AR +QP IIF+DEID+I R ++ + E++ R + LL M
Sbjct: 318 KYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSG---EVESRVVATLLTLM 374
Query: 338 DGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARL-AHTWPISIHAGPI 396
DG + G+V +I ATNRP+++DPAL RPGR D+++EI +P+ AR T S +
Sbjct: 375 DGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQFSRMS--- 431
Query: 397 AKHGEIDYEAVVKLSD---SFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDN 453
+ +D EA+ ++ + GADL +C E+ + I +R T + K KV+
Sbjct: 432 SDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTI--QRGLGTDANIDKFSLKVTLK 489
Query: 454 KKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVR----KVSDNKKLESKLDYKPVIELP 509
E+ + IR +E F++ + + ++L++K+ K +I+LP
Sbjct: 490 D---------VESAMVDIRPS---AMREIFLEMPKVYWSDIGGQEELKTKM--KEMIQLP 535
Query: 510 LLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESA 569
L E F R+GI+ PKG LLYGPPG KTL A+A+A++ NFL V I +KY+GES
Sbjct: 536 LEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESE 595
Query: 570 RLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQ 629
R IRE+F AR+ P IIF DEIDA+ R TSA + L LLN++DG + L
Sbjct: 596 RAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSAANHV---LTSLLNEIDGVEELKG 652
Query: 630 VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
V ++ ATNRPD +D ALLRPGRLDR I + P+ ARLEILK
Sbjct: 653 VVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILK 694
Score = 169 bits (428), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 135/207 (65%), Gaps = 8/207 (3%)
Query: 493 NKKLESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANF 552
+K++ES K IE+PL P LF G++PP+G LL+GPPGTGKT+L R VA+ +A+
Sbjct: 251 DKEIES---LKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAHV 307
Query: 553 LKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ- 611
L + +IV KY+GE+ +R++FN AR +QP IIF+DEID+I R ++ + E++
Sbjct: 308 LTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSG---EVES 364
Query: 612 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
R + LL MDG + G+V +I ATNRP+++DPAL RPGR D+++EI +P+ AR +IL
Sbjct: 365 RVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILT 424
Query: 672 IHAGPIAKHGEIGDA-ATKWVLPFTAG 697
++ + D+ A K++ T G
Sbjct: 425 KQFSRMSSDRHVLDSEAIKYIASKTHG 451
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 156/308 (50%), Gaps = 46/308 (14%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+ +S IGG E +++E+I+LPL E F R+GI+ PKG LLYGPPG KTL A+A+A+
Sbjct: 513 VYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALAT 572
Query: 228 QLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARL 287
+ NFL V I +KY+GES R
Sbjct: 573 ESGINFLAV-----------------------------------KGPEIFNKYVGESERA 597
Query: 288 IREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVK 347
IRE+F AR+ P IIF DEIDA+ R TSA + L LLN++DG + L V
Sbjct: 598 IREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSAANHV---LTSLLNEIDGVEELKGVV 654
Query: 348 MIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAV 407
++ ATNRPD +D ALLRPGRLDR I + P+ ARL + + +D +
Sbjct: 655 IVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFN--TEESGVDLHEL 712
Query: 408 VKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQE--DFMKAVRKVSDNKKLDHCNSYRTE 465
++ ++GA++ +C EAGL AI + + E F KA + ++ + + Y
Sbjct: 713 ADRTEGYSGAEVVLLCQEAGLAAIMEDLDVAKVELRHFEKAFKGIARGITPEMLSYYEE- 771
Query: 466 AGLFAIRS 473
FA+RS
Sbjct: 772 ---FALRS 776
>sp|Q5JHS5|PAN_PYRKO Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis
(strain ATCC BAA-918 / JCM 12380 / KOD1) GN=pan PE=3
SV=1
Length = 397
Score = 320 bits (820), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 168/348 (48%), Positives = 222/348 (63%), Gaps = 39/348 (11%)
Query: 108 IVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGD 167
IV+ NGPR+VV +++ KLK G RVALD T+ I+ LP E DP V +
Sbjct: 75 IVQNYNGPRFVVRIAPWIERDKLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPK 134
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+TY+ IGGL +Q++ELRE IELPL +PELF++VGI PPKG LLYGPPG GKTL+A+AVA+
Sbjct: 135 VTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKTLMAKAVAN 194
Query: 228 QLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARL 287
++A F++VV S +V K+IGE ARL
Sbjct: 195 HVNATFIRVVG-----------------------------------SELVRKFIGEGARL 219
Query: 288 IREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVK 347
+ E+F A+ P IIF+DEIDAIG +R E T +RE+ RTLM+LL +MDGFD G VK
Sbjct: 220 VHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVK 279
Query: 348 MIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAV 407
+I ATNRPD LDPALLRPGR DR IE+PLP+ Q RL + +H + G +D +
Sbjct: 280 VIAATNRPDILDPALLRPGRFDRLIEVPLPDYQGRLEI---LKVHTRKMNLKG-VDLRVI 335
Query: 408 VKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 455
++++ +GADL+ + TEAG+FAIR R YVTQ+DF+KAV KV ++K
Sbjct: 336 AEITEGASGADLKAIATEAGMFAIRDRRTYVTQDDFLKAVDKVIGSEK 383
Score = 237 bits (604), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 113/184 (61%), Positives = 142/184 (77%), Gaps = 1/184 (0%)
Query: 491 SDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 549
+D LE +L + + IELPL +PELF++VGI PPKG LLYGPPG GKTL+A+AVA+ ++
Sbjct: 138 NDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKTLMAKAVANHVN 197
Query: 550 ANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADRE 609
A F++VV S +V K+IGE ARL+ E+F A+ P IIF+DEIDAIG +R E T +RE
Sbjct: 198 ATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGERE 257
Query: 610 IQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEI 669
+ RTLM+LL +MDGFD G VK+I ATNRPD LDPALLRPGR DR IE+PLP+ Q RLEI
Sbjct: 258 VNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDYQGRLEI 317
Query: 670 LKIH 673
LK+H
Sbjct: 318 LKVH 321
>sp|Q9P3A7|CDC48_SCHPO Cell division cycle protein 48 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cdc48 PE=1 SV=2
Length = 815
Score = 320 bits (819), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 192/545 (35%), Positives = 304/545 (55%), Gaps = 52/545 (9%)
Query: 166 GDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAV 225
++ Y IGG Q+ ++RE++ELPL +P+LF+ +GI PP+G L+YGPPGTGKTL+ARAV
Sbjct: 219 AEVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAV 278
Query: 226 ASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESA 285
A++ A F F I+ K GES
Sbjct: 279 ANETGAFF-----------------------------------FLINGPEIMSKMAGESE 303
Query: 286 RLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQ 345
+R+ F A + P IIF+DEID+I +R E T+ + E +R + +LL MDG +
Sbjct: 304 SNLRKAFEEAEKNSPAIIFIDEIDSIAPKR--EKTNGEVE-RRVVSQLLTLMDGMKARSN 360
Query: 346 VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYE 405
V ++ ATNRP+++DPAL R GR DR++++ +P+ RL + IH + ++D E
Sbjct: 361 VVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEI---LRIHTKNMKLADDVDLE 417
Query: 406 AVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVT-QEDFMKAVRKVSDNKKLDHCNSYRT 464
+ + + G+DL ++C+EA + IR + + + ED + A +V D+ + N +R
Sbjct: 418 QIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEIDA--EVLDSLGVTMDN-FRF 474
Query: 465 EAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKPVIELPLLNPELFQRVGITPP 524
G + RE V + + VR E K + + +++P++ E F R G+TP
Sbjct: 475 ALGSSNPSALRETVVE---VPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPS 531
Query: 525 KGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQP 584
KG L +GPPGTGKTLLA+A+A++ ANF+ V ++ + GES +R++F+ AR P
Sbjct: 532 KGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAP 591
Query: 585 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDP 644
C++F+DE+D+I R + + R + +LL +MDG +S V +I ATNRPD +DP
Sbjct: 592 CVVFLDELDSIAKARGASAGDS-GGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDP 650
Query: 645 ALLRPGRLDRKIEIPLPNEQARLEIL--KIHAGPIAKHGEIGDAATKWVLPFTAGGFIYI 702
AL+RPGRLD+ I +PLP+E+AR IL ++ P+A+ ++ A K F+ ++
Sbjct: 651 ALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDL-RAVAKATHGFSGADLEFV 709
Query: 703 ATVSV 707
+V
Sbjct: 710 VQRAV 714
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 149/270 (55%), Gaps = 39/270 (14%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++ + IGGL E RELRE +++P++ E F R G+TP KG L +GPPGTGKTLLA+A+A
Sbjct: 493 NVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIA 552
Query: 227 SQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESAR 286
++ ANF+ V ++ + GES
Sbjct: 553 NECSANFISV-----------------------------------KGPELLSMWFGESES 577
Query: 287 LIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQV 346
+R++F+ AR PC++F+DE+D+I R + + R + +LL +MDG +S V
Sbjct: 578 NVRDIFDKARAAAPCVVFLDELDSIAKARGASAGDS-GGGDRVVNQLLTEMDGVNSKKNV 636
Query: 347 KMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEA 406
+I ATNRPD +DPAL+RPGRLD+ I +PLP+E+AR + + P+A+ ++D A
Sbjct: 637 FVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFS-ILQTQLRHTPVAE--DVDLRA 693
Query: 407 VVKLSDSFNGADLRNVCTEAGLFAIRSERE 436
V K + F+GADL V A AI+ E
Sbjct: 694 VAKATHGFSGADLEFVVQRAVKLAIKDSIE 723
>sp|Q5R8D7|PRS7_PONAB 26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2
SV=3
Length = 433
Score = 320 bits (819), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 164/376 (43%), Positives = 230/376 (61%), Gaps = 48/376 (12%)
Query: 85 DLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRR----------QLDKAKLKSGT 134
DL A + Q V++C +I + P+Y++ ++ Q+ ++ G
Sbjct: 79 DLAADKQTLQSEQPLQVARCTKIITADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGM 138
Query: 135 RVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNP 194
RV +D I LP ++DP V M E+ D+TYS +GG EQI +LREV+E PLL+P
Sbjct: 139 RVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHP 198
Query: 195 ELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMAILMGN 254
E F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S
Sbjct: 199 ERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGS--------------- 243
Query: 255 QLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGR 314
+V KY+GE AR++RE+F AR + C+IF DEIDAIGG
Sbjct: 244 --------------------ELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 315 RFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEI 374
RF +G D E+QRT++EL+NQ+DGFD G +K++MATNRPDTLDPAL+RPGRLDRKIE
Sbjct: 284 RFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 343
Query: 375 PLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE 434
LP+ + R T + IHA ++ +I +E + +L + GA++R+VCTEAG+FAIR+
Sbjct: 344 SLPDLEGR---THILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 400
Query: 435 REYVTQEDFMKAVRKV 450
R+ T++DF++AV KV
Sbjct: 401 RKIATEKDFLEAVNKV 416
Score = 241 bits (615), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 108/170 (63%), Positives = 136/170 (80%)
Query: 505 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKY 564
V+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S +V KY
Sbjct: 190 VVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKY 249
Query: 565 IGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 624
+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+NQ+DGF
Sbjct: 250 VGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGF 309
Query: 625 DSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
D G +K++MATNRPDTLDPAL+RPGRLDRKIE LP+ + R ILKIHA
Sbjct: 310 DPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHILKIHA 359
>sp|Q01853|TERA_MOUSE Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp
PE=1 SV=4
Length = 806
Score = 319 bits (818), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 193/534 (36%), Positives = 293/534 (54%), Gaps = 56/534 (10%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 212 GPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPF 271
GPPGTGKTL+ARAVA++ A F F
Sbjct: 245 GPPGTGKTLIARAVANETGAFF-----------------------------------FLI 269
Query: 272 YSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM 331
I+ K GES +R+ F A + P IIF+DE+DAI +R E T + E +R +
Sbjct: 270 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVS 326
Query: 332 ELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISI 391
+LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RL + I
Sbjct: 327 QLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI---LQI 383
Query: 392 HAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQED-FMKAVRKV 450
H + ++D E V + GADL +C+EA L AIR + + + ED + A
Sbjct: 384 HTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMN 443
Query: 451 SDNKKLDHCNSYRTEAGLFAIRS---EREYVTQEDFMKAVRKVSDNKKLESKLDYKPVIE 507
S +D +++ A+R E VT ED + + D K+ + + +++
Sbjct: 444 SLAVTMDDFRWALSQSNPSALRETVVEVPQVTWED----IGGLEDVKR-----ELQELVQ 494
Query: 508 LPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGE 567
P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ + ++ + GE
Sbjct: 495 YPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 554
Query: 568 SARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSL 627
S +RE+F+ AR PC++F DE+D+I R R + ++L +MDG +
Sbjct: 555 SEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTK 614
Query: 628 GQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAK 679
V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E++R+ ILK + P+AK
Sbjct: 615 KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAK 668
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 167/313 (53%), Gaps = 42/313 (13%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 177
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 178 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 237
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
Query: 238 SSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARN 297
+T + GES +RE+F+ AR
Sbjct: 544 GPELLTM-----------------------------------WFGESEANVREIFDKARQ 568
Query: 298 HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDT 357
PC++F DE+D+I R R + ++L +MDG + V +I ATNRPD
Sbjct: 569 AAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDI 628
Query: 358 LDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGA 417
+DPA+LRPGRLD+ I IPLP+E++R+A ++ P+AK ++D E + K+++ F+GA
Sbjct: 629 IDPAILRPGRLDQLIYIPLPDEKSRVA-ILKANLRKSPVAK--DVDLEFLAKMTNGFSGA 685
Query: 418 DLRNVCTEAGLFA 430
DL +C A A
Sbjct: 686 DLTEICQRACKLA 698
>sp|P55072|TERA_HUMAN Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP
PE=1 SV=4
Length = 806
Score = 319 bits (818), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 193/534 (36%), Positives = 293/534 (54%), Gaps = 56/534 (10%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 212 GPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPF 271
GPPGTGKTL+ARAVA++ A F F
Sbjct: 245 GPPGTGKTLIARAVANETGAFF-----------------------------------FLI 269
Query: 272 YSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM 331
I+ K GES +R+ F A + P IIF+DE+DAI +R E T + E +R +
Sbjct: 270 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVS 326
Query: 332 ELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISI 391
+LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RL + I
Sbjct: 327 QLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI---LQI 383
Query: 392 HAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQED-FMKAVRKV 450
H + ++D E V + GADL +C+EA L AIR + + + ED + A
Sbjct: 384 HTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMN 443
Query: 451 SDNKKLDHCNSYRTEAGLFAIRS---EREYVTQEDFMKAVRKVSDNKKLESKLDYKPVIE 507
S +D +++ A+R E VT ED + + D K+ + + +++
Sbjct: 444 SLAVTMDDFRWALSQSNPSALRETVVEVPQVTWED----IGGLEDVKR-----ELQELVQ 494
Query: 508 LPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGE 567
P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ + ++ + GE
Sbjct: 495 YPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 554
Query: 568 SARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSL 627
S +RE+F+ AR PC++F DE+D+I R R + ++L +MDG +
Sbjct: 555 SEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTK 614
Query: 628 GQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAK 679
V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E++R+ ILK + P+AK
Sbjct: 615 KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAK 668
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 167/313 (53%), Gaps = 42/313 (13%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 177
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 178 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 237
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
Query: 238 SSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARN 297
+T + GES +RE+F+ AR
Sbjct: 544 GPELLTM-----------------------------------WFGESEANVREIFDKARQ 568
Query: 298 HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDT 357
PC++F DE+D+I R R + ++L +MDG + V +I ATNRPD
Sbjct: 569 AAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDI 628
Query: 358 LDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGA 417
+DPA+LRPGRLD+ I IPLP+E++R+A ++ P+AK ++D E + K+++ F+GA
Sbjct: 629 IDPAILRPGRLDQLIYIPLPDEKSRVA-ILKANLRKSPVAK--DVDLEFLAKMTNGFSGA 685
Query: 418 DLRNVCTEAGLFA 430
DL +C A A
Sbjct: 686 DLTEICQRACKLA 698
>sp|P46462|TERA_RAT Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus
GN=Vcp PE=1 SV=3
Length = 806
Score = 319 bits (818), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 193/534 (36%), Positives = 293/534 (54%), Gaps = 56/534 (10%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 212 GPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPF 271
GPPGTGKTL+ARAVA++ A F F
Sbjct: 245 GPPGTGKTLIARAVANETGAFF-----------------------------------FLI 269
Query: 272 YSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM 331
I+ K GES +R+ F A + P IIF+DE+DAI +R E T + E +R +
Sbjct: 270 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVS 326
Query: 332 ELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISI 391
+LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RL + I
Sbjct: 327 QLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI---LQI 383
Query: 392 HAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQED-FMKAVRKV 450
H + ++D E V + GADL +C+EA L AIR + + + ED + A
Sbjct: 384 HTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMN 443
Query: 451 SDNKKLDHCNSYRTEAGLFAIRS---EREYVTQEDFMKAVRKVSDNKKLESKLDYKPVIE 507
S +D +++ A+R E VT ED + + D K+ + + +++
Sbjct: 444 SLAVTMDDFRWALSQSNPSALRETVVEVPQVTWED----IGGLEDVKR-----ELQELVQ 494
Query: 508 LPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGE 567
P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ + ++ + GE
Sbjct: 495 YPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 554
Query: 568 SARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSL 627
S +RE+F+ AR PC++F DE+D+I R R + ++L +MDG +
Sbjct: 555 SEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTK 614
Query: 628 GQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAK 679
V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E++R+ ILK + P+AK
Sbjct: 615 KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAK 668
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 167/313 (53%), Gaps = 42/313 (13%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 177
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 178 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 237
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
Query: 238 SSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARN 297
+T + GES +RE+F+ AR
Sbjct: 544 GPELLTM-----------------------------------WFGESEANVREIFDKARQ 568
Query: 298 HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDT 357
PC++F DE+D+I R R + ++L +MDG + V +I ATNRPD
Sbjct: 569 AAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDI 628
Query: 358 LDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGA 417
+DPA+LRPGRLD+ I IPLP+E++R+A ++ P+AK ++D E + K+++ F+GA
Sbjct: 629 IDPAILRPGRLDQLIYIPLPDEKSRVA-ILKANLRKSPVAK--DVDLEFLAKMTNGFSGA 685
Query: 418 DLRNVCTEAGLFA 430
DL +C A A
Sbjct: 686 DLTEICQRACKLA 698
>sp|Q9SSB5|PRS7A_ARATH 26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana
GN=RPT1A PE=2 SV=1
Length = 426
Score = 319 bits (818), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 172/446 (38%), Positives = 264/446 (59%), Gaps = 64/446 (14%)
Query: 31 LREMREQLKELTKQYDKSENDLKALQS--VGQHDLLLHCVREQLKELTKQYDK------- 81
+R++ +++++ E+D+ L++ +G + + V +++K+L K+ +
Sbjct: 2 VRDIEDEIRDEKNPRPLDEDDIALLKTYGLGPYSAPIKKVEKEIKDLAKKINDLCGIKES 61
Query: 82 -------SENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYV----------VGCRRQ 124
S+ DL + + + Q V++C +I T +YV VG +
Sbjct: 62 DTGLAPPSQWDLVSDKQMMQEEQPLQVARCTKIISPNTEDAKYVINVKQIAKFVVGLGDK 121
Query: 125 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 184
+ ++ G RV +D I LP ++DP V M+ E+ D+TY+ +GG EQI ++R
Sbjct: 122 VSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMR 181
Query: 185 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTS 244
EV+ELP+L+PE F ++GI PPKG L YGPPGTGKTLLARAVA++ DA F++V+ S
Sbjct: 182 EVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGS----- 236
Query: 245 KEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIF 304
+V KY+GE AR++RE+F AR+ + CI+F
Sbjct: 237 ------------------------------ELVQKYVGEGARMVRELFQMARSKKACIVF 266
Query: 305 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLR 364
DE+DAIGG RF +G D E+QRT++E++NQ+DGFD+ G +K++MATNRPDTLDPALLR
Sbjct: 267 FDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLR 326
Query: 365 PGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCT 424
PGRLDRK+E LP+ ++R T IH + +I +E + +L + GAD+R+VCT
Sbjct: 327 PGRLDRKVEFGLPDLESR---TQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCT 383
Query: 425 EAGLFAIRSEREYVTQEDFMKAVRKV 450
EAG++AIR+ R+ VT++DF+ AV KV
Sbjct: 384 EAGMYAIRARRKTVTEKDFLDAVNKV 409
Score = 243 bits (619), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 105/169 (62%), Positives = 140/169 (82%)
Query: 505 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKY 564
V+ELP+L+PE F ++GI PPKG L YGPPGTGKTLLARAVA++ DA F++V+ S +V KY
Sbjct: 183 VVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKY 242
Query: 565 IGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 624
+GE AR++RE+F AR+ + CI+F DE+DAIGG RF +G D E+QRT++E++NQ+DGF
Sbjct: 243 VGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGF 302
Query: 625 DSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
D+ G +K++MATNRPDTLDPALLRPGRLDRK+E LP+ ++R +I KIH
Sbjct: 303 DARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIH 351
>sp|P03974|TERA_PIG Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1
SV=5
Length = 806
Score = 319 bits (818), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 193/534 (36%), Positives = 293/534 (54%), Gaps = 56/534 (10%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 212 GPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPF 271
GPPGTGKTL+ARAVA++ A F F
Sbjct: 245 GPPGTGKTLIARAVANETGAFF-----------------------------------FLI 269
Query: 272 YSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM 331
I+ K GES +R+ F A + P IIF+DE+DAI +R E T + E +R +
Sbjct: 270 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVS 326
Query: 332 ELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISI 391
+LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RL + I
Sbjct: 327 QLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI---LQI 383
Query: 392 HAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQED-FMKAVRKV 450
H + ++D E V + GADL +C+EA L AIR + + + ED + A
Sbjct: 384 HTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMN 443
Query: 451 SDNKKLDHCNSYRTEAGLFAIRS---EREYVTQEDFMKAVRKVSDNKKLESKLDYKPVIE 507
S +D +++ A+R E VT ED + + D K+ + + +++
Sbjct: 444 SLAVTMDDFRWALSQSNPSALRETVVEVPQVTWED----IGGLEDVKR-----ELQDLVQ 494
Query: 508 LPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGE 567
P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ + ++ + GE
Sbjct: 495 YPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 554
Query: 568 SARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSL 627
S +RE+F+ AR PC++F DE+D+I R R + ++L +MDG +
Sbjct: 555 SEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTK 614
Query: 628 GQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAK 679
V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E++R+ ILK + P+AK
Sbjct: 615 KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAK 668
Score = 183 bits (465), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/313 (33%), Positives = 167/313 (53%), Gaps = 42/313 (13%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 177
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 178 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 237
+ REL+++++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
Query: 238 SSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARN 297
+T + GES +RE+F+ AR
Sbjct: 544 GPELLTM-----------------------------------WFGESEANVREIFDKARQ 568
Query: 298 HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDT 357
PC++F DE+D+I R R + ++L +MDG + V +I ATNRPD
Sbjct: 569 AAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDI 628
Query: 358 LDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGA 417
+DPA+LRPGRLD+ I IPLP+E++R+A ++ P+AK ++D E + K+++ F+GA
Sbjct: 629 IDPAILRPGRLDQLIYIPLPDEKSRVA-ILKANLRKSPVAK--DVDLEFLAKMTNGFSGA 685
Query: 418 DLRNVCTEAGLFA 430
DL +C A A
Sbjct: 686 DLTEICQRACKLA 698
>sp|Q3ZBT1|TERA_BOVIN Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=2
SV=1
Length = 806
Score = 319 bits (818), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 193/534 (36%), Positives = 293/534 (54%), Gaps = 56/534 (10%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 212 GPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPF 271
GPPGTGKTL+ARAVA++ A F F
Sbjct: 245 GPPGTGKTLIARAVANETGAFF-----------------------------------FLI 269
Query: 272 YSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM 331
I+ K GES +R+ F A + P IIF+DE+DAI +R E T + E +R +
Sbjct: 270 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVS 326
Query: 332 ELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISI 391
+LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RL + I
Sbjct: 327 QLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI---LQI 383
Query: 392 HAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQED-FMKAVRKV 450
H + ++D E V + GADL +C+EA L AIR + + + ED + A
Sbjct: 384 HTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMN 443
Query: 451 SDNKKLDHCNSYRTEAGLFAIRS---EREYVTQEDFMKAVRKVSDNKKLESKLDYKPVIE 507
S +D +++ A+R E VT ED + + D K+ + + +++
Sbjct: 444 SLAVTMDDFRWALSQSNPSALRETVVEVPQVTWED----IGGLEDVKR-----ELQELVQ 494
Query: 508 LPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGE 567
P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ + ++ + GE
Sbjct: 495 YPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 554
Query: 568 SARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSL 627
S +RE+F+ AR PC++F DE+D+I R R + ++L +MDG +
Sbjct: 555 SEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTK 614
Query: 628 GQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAK 679
V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E++R+ ILK + P+AK
Sbjct: 615 KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAK 668
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 167/313 (53%), Gaps = 42/313 (13%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 177
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 178 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 237
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
Query: 238 SSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARN 297
+T + GES +RE+F+ AR
Sbjct: 544 GPELLTM-----------------------------------WFGESEANVREIFDKARQ 568
Query: 298 HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDT 357
PC++F DE+D+I R R + ++L +MDG + V +I ATNRPD
Sbjct: 569 AAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDI 628
Query: 358 LDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGA 417
+DPA+LRPGRLD+ I IPLP+E++R+A ++ P+AK ++D E + K+++ F+GA
Sbjct: 629 IDPAILRPGRLDQLIYIPLPDEKSRVA-ILKANLRKSPVAK--DVDLEFLAKMTNGFSGA 685
Query: 418 DLRNVCTEAGLFA 430
DL +C A A
Sbjct: 686 DLTEICQRACKLA 698
>sp|Q9FXT9|PRS7_ORYSJ 26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica
GN=RPT1A PE=2 SV=1
Length = 426
Score = 319 bits (817), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 171/428 (39%), Positives = 255/428 (59%), Gaps = 64/428 (14%)
Query: 49 ENDLKALQS--VGQHDLLLHCVREQLKELTKQYDK--------------SENDLKALQSV 92
E+D+ L++ +G + + V +++KE+ K+ + S+ DL + + +
Sbjct: 20 EDDIALLKTYGLGPYSTSIKKVEKEIKEMAKKINDLCGIKESDTGLAPPSQWDLVSDKQM 79
Query: 93 GQVSLSTSVSKCWTVIVKATNGPRYV----------VGCRRQLDKAKLKSGTRVALDMTT 142
Q V++C +I T+ +YV VG ++ ++ G RV +D
Sbjct: 80 MQEEQPLQVARCTKIISPNTDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNK 139
Query: 143 LTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGI 202
I LP ++DP V M+ E+ D+TY+ +GG EQI ++REV+ELP+L+PE F ++GI
Sbjct: 140 YQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGI 199
Query: 203 TPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTH 262
PPKG L YGPPGTGKTLLARAVA++ DA F++V+ S
Sbjct: 200 DPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGS----------------------- 236
Query: 263 HLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSA 322
+V KY+GE AR++RE+F AR+ + CI+F DE+DAIGG RF +G
Sbjct: 237 ------------ELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGG 284
Query: 323 DREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQAR 382
D E+QRT++E++NQ+DGFD+ G +K++MATNRPDTLDPALLRPGRLDRK+E LP+ + R
Sbjct: 285 DNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGR 344
Query: 383 LAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQED 442
T IH + +I +E + +L + GAD+R+VCTEAG++AIR+ R+ VT++D
Sbjct: 345 ---TQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKD 401
Query: 443 FMKAVRKV 450
F+ AV KV
Sbjct: 402 FLDAVNKV 409
Score = 242 bits (618), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 105/169 (62%), Positives = 139/169 (82%)
Query: 505 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKY 564
V+ELP+L+PE F ++GI PPKG L YGPPGTGKTLLARAVA++ DA F++V+ S +V KY
Sbjct: 183 VVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKY 242
Query: 565 IGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 624
+GE AR++RE+F AR+ + CI+F DE+DAIGG RF +G D E+QRT++E++NQ+DGF
Sbjct: 243 VGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGF 302
Query: 625 DSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
D+ G +K++MATNRPDTLDPALLRPGRLDRK+E LP+ + R +I KIH
Sbjct: 303 DARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIH 351
>sp|P23787|TERA_XENLA Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp
PE=1 SV=3
Length = 805
Score = 319 bits (817), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 193/538 (35%), Positives = 294/538 (54%), Gaps = 56/538 (10%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 212 GPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPF 271
GPPGTGKTL+ARAVA++ A F F
Sbjct: 245 GPPGTGKTLIARAVANETGAFF-----------------------------------FLI 269
Query: 272 YSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM 331
I+ K GES +R+ F A + P IIF+DE+DAI +R E T + E +R +
Sbjct: 270 NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVS 326
Query: 332 ELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISI 391
+LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RL + I
Sbjct: 327 QLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEI---LQI 383
Query: 392 HAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQED-FMKAVRKV 450
H + ++D E V + GADL +C+EA L AIR + + + ED + A
Sbjct: 384 HTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMN 443
Query: 451 SDNKKLDHCNSYRTEAGLFAIRS---EREYVTQEDFMKAVRKVSDNKKLESKLDYKPVIE 507
S +D +++ A+R E VT ED + + D K+ + + +++
Sbjct: 444 SLAVTMDDFRWALSQSNPSALRETVVEVPQVTWED----IGGLEDVKR-----ELQELVQ 494
Query: 508 LPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGE 567
P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ + ++ + GE
Sbjct: 495 YPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 554
Query: 568 SARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSL 627
S +RE+F+ AR PC++F DE+D+I R R + ++L +MDG
Sbjct: 555 SEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIK 614
Query: 628 GQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAKHGEI 683
V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E++R+ ILK + P+AK ++
Sbjct: 615 KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDV 672
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 169/319 (52%), Gaps = 42/319 (13%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 177
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 178 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 237
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
Query: 238 SSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARN 297
+T + GES +RE+F+ AR
Sbjct: 544 GPELLTM-----------------------------------WFGESEANVREIFDKARQ 568
Query: 298 HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDT 357
PC++F DE+D+I R R + ++L +MDG V +I ATNRPD
Sbjct: 569 AAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDI 628
Query: 358 LDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGA 417
+DPA+LRPGRLD+ I IPLP+E++R+A ++ P+AK ++D+ + K+++ F+GA
Sbjct: 629 IDPAILRPGRLDQLIYIPLPDEKSRMA-ILKANLRKSPVAKDVDVDF--LAKMTNGFSGA 685
Query: 418 DLRNVCTEAGLFAIRSERE 436
DL +C A AIR E
Sbjct: 686 DLTEICQRACKLAIRESIE 704
>sp|P46471|PRS7_MOUSE 26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1
SV=5
Length = 433
Score = 318 bits (815), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 164/376 (43%), Positives = 229/376 (60%), Gaps = 48/376 (12%)
Query: 85 DLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRR----------QLDKAKLKSGT 134
DL A + Q V++C +I + P+Y++ ++ Q+ ++ G
Sbjct: 79 DLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGM 138
Query: 135 RVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNP 194
RV +D I LP ++DP V M E+ D+TYS +GG EQI +LREV+E PLL+P
Sbjct: 139 RVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHP 198
Query: 195 ELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMAILMGN 254
E F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S
Sbjct: 199 ERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGS--------------- 243
Query: 255 QLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGR 314
+V KY+GE AR++RE+F AR + C+IF DEIDAIGG
Sbjct: 244 --------------------ELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283
Query: 315 RFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEI 374
RF +G D E+QRT++EL+NQ+DGFD G +K++MATNRPDTLDPAL+RPGRLDRKIE
Sbjct: 284 RFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 343
Query: 375 PLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE 434
LP+ + R T IHA ++ +I +E + +L + GA++R+VCTEAG+FAIR+
Sbjct: 344 SLPDLEGR---THIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRAR 400
Query: 435 REYVTQEDFMKAVRKV 450
R+ T++DF++AV KV
Sbjct: 401 RKIATEKDFLEAVNKV 416
Score = 240 bits (612), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 111/196 (56%), Positives = 144/196 (73%)
Query: 505 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKY 564
V+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S +V KY
Sbjct: 190 VVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKY 249
Query: 565 IGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 624
+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+NQ+DGF
Sbjct: 250 VGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGF 309
Query: 625 DSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGEIG 684
D G +K++MATNRPDTLDPAL+RPGRLDRKIE LP+ + R I KIHA ++ +I
Sbjct: 310 DPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIR 369
Query: 685 DAATKWVLPFTAGGFI 700
+ P + G I
Sbjct: 370 FELLARLCPNSTGAEI 385
>sp|Q41365|PRS7_SPIOL 26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2
SV=1
Length = 426
Score = 318 bits (815), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 173/444 (38%), Positives = 260/444 (58%), Gaps = 64/444 (14%)
Query: 33 EMREQLKELTKQYDKSENDLKALQS--VGQHDLLLHCVREQLKELTKQYDK--------- 81
E + LK+ E+D+ L++ +G + + V +++K+++K+ +
Sbjct: 4 EHEDDLKDEKNPRPLDEDDIALLKTYGLGPYSASIKKVEKEIKDMSKKVNDLIGIKESDT 63
Query: 82 -----SENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYV----------VGCRRQLD 126
S+ DL + + + Q V++C +I T +YV VG ++
Sbjct: 64 GLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNTEDAKYVINVKQIAKFVVGLGDKVS 123
Query: 127 KAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREV 186
++ G RV +D I LP ++DP V M+ E+ D+TY+ +GG EQI ++REV
Sbjct: 124 PTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREV 183
Query: 187 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKE 246
+ELP+L+PE F ++GI PPKG L YGPPGTGKTLLARAVA++ DA F++V+ S
Sbjct: 184 VELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGS------- 236
Query: 247 DMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMD 306
+V KY+GE AR++RE+F AR+ + CI+F D
Sbjct: 237 ----------------------------ELVQKYVGEGARMVRELFQMARSKKACIVFFD 268
Query: 307 EIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPG 366
E+DAIGG RF +G D E+QRT++E++NQ+DGFD+ G +K++MATNRPDTLDPALLRPG
Sbjct: 269 EVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPG 328
Query: 367 RLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEA 426
RLDRK+E LP+ + R T IH + +I +E + +L + GAD+R+VCTEA
Sbjct: 329 RLDRKVEFGLPDLEGR---TQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEA 385
Query: 427 GLFAIRSEREYVTQEDFMKAVRKV 450
G++AIR+ R+ VT++DF+ AV KV
Sbjct: 386 GMYAIRARRKTVTEKDFLDAVNKV 409
Score = 243 bits (620), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 105/169 (62%), Positives = 139/169 (82%)
Query: 505 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKY 564
V+ELP+L+PE F ++GI PPKG L YGPPGTGKTLLARAVA++ DA F++V+ S +V KY
Sbjct: 183 VVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKY 242
Query: 565 IGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 624
+GE AR++RE+F AR+ + CI+F DE+DAIGG RF +G D E+QRT++E++NQ+DGF
Sbjct: 243 VGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGF 302
Query: 625 DSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
D+ G +K++MATNRPDTLDPALLRPGRLDRK+E LP+ + R +I KIH
Sbjct: 303 DARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIH 351
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 270,773,018
Number of Sequences: 539616
Number of extensions: 11644585
Number of successful extensions: 59704
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1602
Number of HSP's successfully gapped in prelim test: 1330
Number of HSP's that attempted gapping in prelim test: 50497
Number of HSP's gapped (non-prelim): 9084
length of query: 741
length of database: 191,569,459
effective HSP length: 125
effective length of query: 616
effective length of database: 124,117,459
effective search space: 76456354744
effective search space used: 76456354744
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)