Query psy11254
Match_columns 741
No_of_seqs 706 out of 5169
Neff 8.2
Searched_HMMs 13730
Date Fri Aug 16 22:07:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11254.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/11254hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lv7a_ c.37.1.20 (A:) AAA dom 100.0 5.5E-41 4E-45 343.6 24.3 250 163-451 4-253 (256)
2 d1ixza_ c.37.1.20 (A:) AAA dom 100.0 2.1E-40 1.5E-44 338.0 24.3 245 164-447 2-246 (247)
3 d1e32a2 c.37.1.20 (A:201-458) 100.0 5.6E-38 4.1E-42 323.1 22.1 227 168-435 1-227 (258)
4 d1lv7a_ c.37.1.20 (A:) AAA dom 100.0 1.4E-36 1E-40 310.8 20.1 223 510-732 31-253 (256)
5 d1r7ra3 c.37.1.20 (A:471-735) 100.0 4.2E-37 3E-41 317.5 15.1 232 165-434 1-232 (265)
6 d1ixza_ c.37.1.20 (A:) AAA dom 100.0 6.8E-36 4.9E-40 304.4 20.6 219 510-728 28-246 (247)
7 d1e32a2 c.37.1.20 (A:201-458) 100.0 1.3E-33 9.2E-38 290.4 16.7 206 503-711 17-222 (258)
8 d1r7ra3 c.37.1.20 (A:471-735) 100.0 1.1E-32 7.7E-37 284.3 16.0 205 503-707 20-224 (265)
9 d1w44a_ c.37.1.11 (A:) NTPase 99.9 1.9E-29 1.4E-33 262.6 -7.4 168 507-678 105-278 (321)
10 d1d2na_ c.37.1.20 (A:) Hexamer 99.9 4.1E-23 3E-27 209.5 11.5 144 521-671 37-182 (246)
11 d1w44a_ c.37.1.11 (A:) NTPase 99.9 3E-24 2.2E-28 223.1 -2.6 165 189-396 106-277 (321)
12 d1g2912 c.37.1.12 (1:1-240) Ma 99.8 1.4E-22 9.9E-27 202.2 1.3 163 187-364 9-209 (240)
13 d2awna2 c.37.1.12 (A:4-235) Ma 99.8 7E-23 5.1E-27 203.2 -1.1 160 187-361 6-197 (232)
14 d1v43a3 c.37.1.12 (A:7-245) Hy 99.8 1.6E-22 1.1E-26 201.4 0.8 161 187-362 12-204 (239)
15 d1ofha_ c.37.1.20 (A:) HslU {H 99.8 7.6E-21 5.5E-25 199.4 12.5 150 523-676 48-216 (309)
16 d3d31a2 c.37.1.12 (A:1-229) Su 99.8 1E-21 7.6E-26 194.1 3.4 158 187-360 7-193 (229)
17 d1oxxk2 c.37.1.12 (K:1-242) Gl 99.8 4.9E-22 3.6E-26 197.9 -1.5 157 192-363 16-209 (242)
18 d3dhwc1 c.37.1.12 (C:1-240) Me 99.8 2.1E-21 1.5E-25 193.5 2.7 153 195-362 19-208 (240)
19 d1l2ta_ c.37.1.12 (A:) MJ0796 99.8 1.1E-20 7.7E-25 187.4 6.8 148 196-358 20-209 (230)
20 d1vpla_ c.37.1.12 (A:) Putativ 99.8 3.5E-21 2.5E-25 192.9 2.7 162 187-364 8-202 (238)
21 d1g6ha_ c.37.1.12 (A:) MJ1267 99.8 1.4E-20 9.9E-25 190.8 6.7 162 187-364 10-219 (254)
22 d1d2na_ c.37.1.20 (A:) Hexamer 99.8 1.4E-19 1E-23 183.1 11.1 165 171-378 9-175 (246)
23 d1ji0a_ c.37.1.12 (A:) Branche 99.8 6.7E-21 4.9E-25 191.1 0.6 160 187-362 12-206 (240)
24 d2onka1 c.37.1.12 (A:1-240) Mo 99.8 3.1E-20 2.2E-24 184.3 3.6 147 199-360 17-192 (240)
25 d1b0ua_ c.37.1.12 (A:) ATP-bin 99.8 1.4E-20 1E-24 190.5 1.2 162 187-364 8-218 (258)
26 d1ofha_ c.37.1.20 (A:) HslU {H 99.7 6.2E-19 4.5E-23 184.7 9.7 177 172-385 15-209 (309)
27 d3b60a1 c.37.1.12 (A:329-581) 99.7 1.2E-18 8.4E-23 176.1 9.0 151 192-359 26-215 (253)
28 d1jj7a_ c.37.1.12 (A:) Peptide 99.7 3.5E-19 2.6E-23 179.7 5.1 150 195-359 28-216 (251)
29 d2pmka1 c.37.1.12 (A:467-707) 99.7 2.4E-18 1.7E-22 172.2 8.3 151 192-359 14-202 (241)
30 d2hyda1 c.37.1.12 (A:324-578) 99.7 7.5E-19 5.5E-23 177.2 4.2 153 190-359 27-217 (255)
31 d1sgwa_ c.37.1.12 (A:) Putativ 99.7 3E-18 2.2E-22 167.2 5.5 155 188-359 9-190 (200)
32 d1l7vc_ c.37.1.12 (C:) ABC tra 99.7 4.6E-18 3.4E-22 169.6 5.5 152 196-364 14-201 (231)
33 d1mv5a_ c.37.1.12 (A:) Multidr 99.7 2.5E-18 1.8E-22 172.4 2.8 156 187-359 7-202 (242)
34 d1in4a2 c.37.1.20 (A:17-254) H 99.7 1E-15 7.4E-20 153.8 18.7 214 169-449 7-233 (238)
35 d1r0wa_ c.37.1.12 (A:) Cystic 99.7 1E-17 7.6E-22 171.6 3.1 151 192-358 47-221 (281)
36 d1ixsb2 c.37.1.20 (B:4-242) Ho 99.6 4.4E-14 3.2E-18 141.7 20.8 215 168-448 6-233 (239)
37 d1in4a2 c.37.1.20 (A:17-254) H 99.6 2.1E-14 1.5E-18 144.0 16.5 183 524-729 35-232 (238)
38 d1ixsb2 c.37.1.20 (B:4-242) Ho 99.5 2.7E-13 2E-17 135.8 17.1 185 523-729 34-233 (239)
39 d1r6bx2 c.37.1.20 (X:169-436) 99.4 1E-12 7.6E-17 132.4 17.1 166 170-385 17-189 (268)
40 d1svma_ c.37.1.20 (A:) Papillo 99.4 1.9E-13 1.3E-17 144.8 6.8 138 520-675 150-300 (362)
41 d1r6bx2 c.37.1.20 (X:169-436) 99.4 5E-12 3.6E-16 127.4 16.2 159 518-688 33-210 (268)
42 d1svma_ c.37.1.20 (A:) Papillo 99.3 9.4E-13 6.8E-17 139.3 9.6 252 145-450 96-354 (362)
43 d1w5sa2 c.37.1.20 (A:7-293) CD 99.3 6.7E-12 4.9E-16 127.9 15.8 245 171-449 16-286 (287)
44 d1r6bx3 c.37.1.20 (X:437-751) 99.3 5.5E-12 4E-16 131.3 14.8 139 526-677 54-233 (315)
45 d1iqpa2 c.37.1.20 (A:2-232) Re 99.3 3.7E-12 2.7E-16 126.7 12.2 175 526-727 47-229 (231)
46 d1qvra3 c.37.1.20 (A:536-850) 99.3 1.5E-12 1.1E-16 135.4 9.5 137 526-677 55-238 (315)
47 d1w5sa2 c.37.1.20 (A:7-293) CD 99.3 6.8E-12 4.9E-16 127.9 12.4 196 527-729 49-285 (287)
48 d1sxja2 c.37.1.20 (A:295-547) 99.3 1.1E-11 8.4E-16 124.6 13.3 209 168-422 11-223 (253)
49 d1fnna2 c.37.1.20 (A:1-276) CD 99.3 1.9E-11 1.4E-15 123.7 14.9 244 168-451 13-274 (276)
50 d1njfa_ c.37.1.20 (A:) delta p 99.2 2.7E-11 2E-15 121.0 14.7 176 524-728 34-237 (239)
51 d1jbka_ c.37.1.20 (A:) ClpB, A 99.2 3.1E-12 2.3E-16 122.0 7.2 155 170-385 21-193 (195)
52 d1jbka_ c.37.1.20 (A:) ClpB, A 99.2 1.5E-11 1.1E-15 117.1 11.3 139 519-670 38-194 (195)
53 d1sxja2 c.37.1.20 (A:295-547) 99.2 6.2E-11 4.5E-15 119.1 16.1 160 521-702 49-222 (253)
54 d1iqpa2 c.37.1.20 (A:2-232) Re 99.2 3.5E-11 2.6E-15 119.4 13.8 148 169-385 22-176 (231)
55 d1njfa_ c.37.1.20 (A:) delta p 99.2 6.5E-11 4.8E-15 118.2 14.6 169 168-384 9-181 (239)
56 d1sxjc2 c.37.1.20 (C:12-238) R 99.2 3.3E-11 2.4E-15 119.2 11.9 151 168-385 11-166 (227)
57 d1qvra2 c.37.1.20 (A:149-535) 99.2 1.7E-11 1.2E-15 130.3 9.1 208 169-430 20-244 (387)
58 d1sxjc2 c.37.1.20 (C:12-238) R 99.2 3.2E-11 2.3E-15 119.3 10.0 181 526-727 37-224 (227)
59 d1sxje2 c.37.1.20 (E:4-255) Re 99.2 1.7E-10 1.2E-14 115.7 15.1 174 168-385 8-198 (252)
60 d1sxjd2 c.37.1.20 (D:26-262) R 99.1 2.3E-10 1.7E-14 113.6 14.4 183 526-730 35-236 (237)
61 d1um8a_ c.37.1.20 (A:) ClpX {H 99.1 8.8E-11 6.4E-15 124.1 10.5 149 523-673 67-281 (364)
62 g1f2t.1 c.37.1.12 (A:,B:) Rad5 99.1 9.2E-11 6.7E-15 119.8 9.8 71 275-359 197-271 (292)
63 d1qvra2 c.37.1.20 (A:149-535) 99.1 2.2E-10 1.6E-14 121.5 11.6 158 519-690 38-215 (387)
64 d1ye8a1 c.37.1.11 (A:1-178) Hy 99.0 1.5E-10 1.1E-14 109.5 8.3 131 208-357 3-142 (178)
65 d1sxje2 c.37.1.20 (E:4-255) Re 99.0 3.1E-10 2.3E-14 113.7 11.0 73 584-675 132-204 (252)
66 d1fnna2 c.37.1.20 (A:1-276) CD 99.0 5E-10 3.6E-14 113.0 12.3 196 523-732 42-274 (276)
67 d1a5ta2 c.37.1.20 (A:1-207) de 99.0 1E-09 7.3E-14 106.8 13.8 128 524-673 24-179 (207)
68 d1sxjd2 c.37.1.20 (D:26-262) R 99.0 1.7E-09 1.2E-13 107.1 15.6 161 168-385 9-175 (237)
69 d1sxjb2 c.37.1.20 (B:7-230) Re 99.0 1.1E-09 7.7E-14 108.0 12.3 139 526-691 38-188 (224)
70 d1r6bx3 c.37.1.20 (X:437-751) 99.0 8E-10 5.9E-14 114.6 10.9 140 171-354 22-171 (315)
71 d1sxjb2 c.37.1.20 (B:7-230) Re 98.9 1.2E-09 8.9E-14 107.5 10.3 145 168-385 12-168 (224)
72 d1a5ta2 c.37.1.20 (A:1-207) de 98.8 8.9E-09 6.5E-13 99.9 12.0 166 175-385 6-175 (207)
73 d1g8pa_ c.37.1.20 (A:) ATPase 98.8 1.7E-08 1.2E-12 105.4 14.3 52 167-231 3-54 (333)
74 d1l8qa2 c.37.1.20 (A:77-289) C 98.8 6.7E-09 4.9E-13 101.2 9.4 151 526-695 38-197 (213)
75 d1qvra3 c.37.1.20 (A:536-850) 98.7 1.4E-08 1E-12 104.9 11.5 138 171-353 23-174 (315)
76 d1g41a_ c.37.1.20 (A:) HslU {H 98.7 3.3E-08 2.4E-12 106.5 13.6 44 524-567 49-93 (443)
77 d1g8pa_ c.37.1.20 (A:) ATPase 98.6 3.2E-08 2.3E-12 103.3 10.2 132 585-730 129-304 (333)
78 d2gnoa2 c.37.1.20 (A:11-208) g 98.6 6.7E-08 4.9E-12 92.8 10.1 126 524-675 15-150 (198)
79 d1um8a_ c.37.1.20 (A:) ClpX {H 98.6 6E-08 4.4E-12 101.9 10.6 130 172-335 18-172 (364)
80 d1gvnb_ c.37.1.21 (B:) Plasmid 98.6 2.5E-10 1.8E-14 115.5 -8.0 45 520-564 28-72 (273)
81 d1gvnb_ c.37.1.21 (B:) Plasmid 98.6 8.8E-09 6.4E-13 103.8 3.2 64 168-240 4-67 (273)
82 d1ye8a1 c.37.1.11 (A:1-178) Hy 98.5 1.5E-07 1.1E-11 88.1 10.8 100 526-640 2-141 (178)
83 d1ny5a2 c.37.1.20 (A:138-384) 98.4 6.4E-07 4.6E-11 88.9 12.3 184 525-727 24-246 (247)
84 d2gnoa2 c.37.1.20 (A:11-208) g 98.4 3.5E-07 2.5E-11 87.6 9.9 116 206-380 16-141 (198)
85 d1l8qa2 c.37.1.20 (A:77-289) C 98.4 4E-07 2.9E-11 88.3 10.5 130 207-385 38-173 (213)
86 d1l2ta_ c.37.1.12 (A:) MJ0796 98.4 3.5E-07 2.5E-11 89.2 9.4 121 518-658 25-218 (230)
87 d3b60a1 c.37.1.12 (A:329-581) 98.4 1E-06 7.3E-11 87.5 12.1 119 519-659 36-224 (253)
88 d2pmka1 c.37.1.12 (A:467-707) 98.3 4.9E-07 3.6E-11 89.0 8.5 109 519-642 24-201 (241)
89 d2awna2 c.37.1.12 (A:4-235) Ma 98.3 3.8E-07 2.8E-11 88.9 6.9 127 519-661 21-215 (232)
90 d1g2912 c.37.1.12 (1:1-240) Ma 98.3 6.4E-07 4.7E-11 87.7 8.2 109 519-640 24-201 (240)
91 d3d31a2 c.37.1.12 (A:1-229) Su 98.3 3.9E-07 2.9E-11 88.6 6.5 109 519-640 21-189 (229)
92 d1g41a_ c.37.1.20 (A:) HslU {H 98.3 9.1E-08 6.6E-12 103.0 1.8 69 173-241 16-85 (443)
93 d1jj7a_ c.37.1.12 (A:) Peptide 98.2 9.3E-07 6.8E-11 87.6 8.9 121 519-659 35-225 (251)
94 d1v43a3 c.37.1.12 (A:7-245) Hy 98.2 7.2E-07 5.2E-11 87.3 7.8 109 519-640 27-198 (239)
95 d1sgwa_ c.37.1.12 (A:) Putativ 98.2 7.8E-07 5.7E-11 85.2 7.9 33 519-551 22-54 (200)
96 d1vpla_ c.37.1.12 (A:) Putativ 98.2 1.3E-06 9.6E-11 85.7 9.7 109 519-641 23-195 (238)
97 d2hyda1 c.37.1.12 (A:324-578) 98.2 1.3E-06 9.2E-11 86.7 8.9 119 519-659 39-226 (255)
98 d1ji0a_ c.37.1.12 (A:) Branche 98.2 1.1E-06 8.1E-11 86.4 8.4 108 519-640 27-200 (240)
99 d3dhwc1 c.37.1.12 (C:1-240) Me 98.1 2.2E-06 1.6E-10 83.8 9.0 109 519-640 26-202 (240)
100 d1g6ha_ c.37.1.12 (A:) MJ1267 98.1 2.6E-06 1.9E-10 84.5 9.3 56 573-642 158-213 (254)
101 d1oxxk2 c.37.1.12 (K:1-242) Gl 98.1 2.3E-06 1.7E-10 83.6 8.7 33 519-551 26-58 (242)
102 d2onka1 c.37.1.12 (A:1-240) Mo 98.1 2.2E-06 1.6E-10 83.6 7.6 103 525-640 25-188 (240)
103 d1mv5a_ c.37.1.12 (A:) Multidr 98.1 1.4E-06 9.8E-11 85.9 6.1 32 519-550 23-54 (242)
104 d1r0wa_ c.37.1.12 (A:) Cystic 98.1 3.9E-06 2.8E-10 84.4 9.0 34 518-551 56-89 (281)
105 d1b0ua_ c.37.1.12 (A:) ATP-bin 98.0 6.5E-06 4.7E-10 81.6 9.0 54 573-640 157-210 (258)
106 d2fnaa2 c.37.1.20 (A:1-283) Ar 97.9 4.8E-05 3.5E-09 75.3 14.7 53 169-238 10-62 (283)
107 d2fnaa2 c.37.1.20 (A:1-283) Ar 97.9 0.00011 8.1E-09 72.6 16.8 141 523-676 28-223 (283)
108 d1l7vc_ c.37.1.12 (C:) ABC tra 97.8 1.6E-05 1.2E-09 77.5 8.7 30 519-548 20-49 (231)
109 d1kaga_ c.37.1.2 (A:) Shikimat 97.6 1.2E-05 8.8E-10 73.0 3.7 30 206-235 3-32 (169)
110 d1kaga_ c.37.1.2 (A:) Shikimat 97.6 1.9E-05 1.4E-09 71.7 4.5 31 525-555 3-33 (169)
111 d1wb9a2 c.37.1.12 (A:567-800) 97.6 7.1E-05 5.2E-09 72.9 8.9 21 207-227 43-63 (234)
112 d1lw7a2 c.37.1.1 (A:220-411) T 97.6 1.2E-05 8.4E-10 74.8 2.9 38 524-561 7-44 (192)
113 d1lw7a2 c.37.1.1 (A:220-411) T 97.5 1.4E-05 1E-09 74.3 2.8 32 205-236 7-38 (192)
114 d1viaa_ c.37.1.2 (A:) Shikimat 97.5 6.5E-05 4.7E-09 68.7 6.8 30 526-555 2-31 (161)
115 d1viaa_ c.37.1.2 (A:) Shikimat 97.5 2.5E-05 1.8E-09 71.6 3.4 31 206-236 1-31 (161)
116 d2a5yb3 c.37.1.20 (B:109-385) 97.4 0.00059 4.3E-08 68.0 13.8 46 172-228 21-67 (277)
117 d1rkba_ c.37.1.1 (A:) Adenylat 97.4 2.5E-05 1.8E-09 71.7 2.9 29 207-235 6-34 (173)
118 d1rkba_ c.37.1.1 (A:) Adenylat 97.4 3.9E-05 2.8E-09 70.3 4.2 29 526-554 6-34 (173)
119 d1p9ra_ c.37.1.11 (A:) Extrace 97.4 0.00041 3E-08 73.0 12.4 53 165-232 132-185 (401)
120 d1zp6a1 c.37.1.25 (A:6-181) Hy 97.4 4.2E-05 3.1E-09 70.4 3.9 36 525-560 5-40 (176)
121 d1ewqa2 c.37.1.12 (A:542-765) 97.4 0.00027 1.9E-08 68.1 9.8 20 208-227 38-57 (224)
122 d1zp6a1 c.37.1.25 (A:6-181) Hy 97.4 3.5E-05 2.5E-09 71.0 3.2 31 208-238 7-37 (176)
123 d1e6ca_ c.37.1.2 (A:) Shikimat 97.4 4.3E-05 3.1E-09 70.6 3.8 31 206-236 3-33 (170)
124 d1ak2a1 c.37.1.1 (A:14-146,A:1 97.4 3.7E-05 2.7E-09 72.3 3.3 30 205-234 1-32 (190)
125 d2i3ba1 c.37.1.11 (A:1-189) Ca 97.3 3.7E-05 2.7E-09 71.1 2.6 29 206-234 2-30 (189)
126 d2iyva1 c.37.1.2 (A:2-166) Shi 97.3 5.2E-05 3.8E-09 69.6 3.6 30 207-236 3-32 (165)
127 d1y63a_ c.37.1.1 (A:) Probable 97.3 5.3E-05 3.9E-09 69.6 3.4 26 205-230 3-30 (174)
128 d1m8pa3 c.37.1.15 (A:391-573) 97.3 5.8E-05 4.2E-09 69.5 3.5 29 205-233 4-34 (183)
129 d1ny5a2 c.37.1.20 (A:138-384) 97.3 0.00058 4.2E-08 66.9 10.9 24 207-230 25-48 (247)
130 d1e6ca_ c.37.1.2 (A:) Shikimat 97.2 8.9E-05 6.5E-09 68.3 4.6 31 525-555 3-33 (170)
131 d2iyva1 c.37.1.2 (A:2-166) Shi 97.2 8.5E-05 6.2E-09 68.1 4.4 30 526-555 3-32 (165)
132 d1qhxa_ c.37.1.3 (A:) Chloramp 97.2 7.8E-05 5.6E-09 68.4 4.0 31 207-237 5-35 (178)
133 d1qhxa_ c.37.1.3 (A:) Chloramp 97.2 0.00012 8.6E-09 67.1 5.2 34 525-558 4-37 (178)
134 d1knqa_ c.37.1.17 (A:) Glucona 97.2 5.8E-05 4.2E-09 69.2 3.0 27 208-234 9-35 (171)
135 g1ii8.1 c.37.1.12 (A:,B:) Rad5 97.2 0.00017 1.3E-08 73.4 7.0 70 276-359 275-348 (369)
136 d1tf7a2 c.37.1.11 (A:256-497) 97.2 0.00038 2.8E-08 67.5 9.2 22 208-229 29-50 (242)
137 d1ak2a1 c.37.1.1 (A:14-146,A:1 97.2 0.00011 7.8E-09 69.0 4.8 38 523-562 2-39 (190)
138 d2bdta1 c.37.1.25 (A:1-176) Hy 97.2 7.6E-05 5.5E-09 68.2 3.2 26 207-232 4-29 (176)
139 d1yj5a2 c.37.1.1 (A:351-522) 5 97.1 0.00051 3.7E-08 63.3 8.6 23 208-230 17-39 (172)
140 d1bifa1 c.37.1.7 (A:37-249) 6- 97.1 0.00074 5.4E-08 63.7 10.1 26 208-233 5-30 (213)
141 d1ukza_ c.37.1.1 (A:) Uridylat 97.1 0.00011 8.4E-09 69.1 4.1 27 208-234 11-37 (196)
142 d1wb9a2 c.37.1.12 (A:567-800) 97.1 0.0007 5.1E-08 65.6 9.8 104 525-643 42-168 (234)
143 d1tf7a2 c.37.1.11 (A:256-497) 97.1 0.0017 1.2E-07 62.8 12.7 89 509-597 9-130 (242)
144 d1zina1 c.37.1.1 (A:1-125,A:16 97.1 9.5E-05 6.9E-09 68.6 3.2 28 208-235 3-30 (182)
145 d1y63a_ c.37.1.1 (A:) Probable 97.1 0.00015 1.1E-08 66.4 4.6 29 523-551 4-32 (174)
146 g1f2t.1 c.37.1.12 (A:,B:) Rad5 97.1 0.00054 4E-08 68.0 9.2 62 576-658 218-279 (292)
147 d1g6oa_ c.37.1.11 (A:) Hexamer 97.1 0.00036 2.7E-08 71.1 7.8 28 206-233 167-194 (323)
148 d1x6va3 c.37.1.4 (A:34-228) Ad 97.1 6.1E-05 4.4E-09 70.6 1.5 30 206-235 18-49 (195)
149 d2bdta1 c.37.1.25 (A:1-176) Hy 97.1 0.00015 1.1E-08 66.2 4.2 28 526-553 4-31 (176)
150 d1zina1 c.37.1.1 (A:1-125,A:16 97.1 0.00016 1.2E-08 66.9 4.4 36 526-563 2-37 (182)
151 d1zaka1 c.37.1.1 (A:3-127,A:15 97.1 9.7E-05 7.1E-09 69.3 2.7 29 206-234 4-32 (189)
152 d1knqa_ c.37.1.17 (A:) Glucona 97.1 0.00016 1.2E-08 66.1 4.2 31 525-555 7-37 (171)
153 d1xp8a1 c.37.1.11 (A:15-282) R 97.0 0.0004 2.9E-08 68.7 7.0 134 208-358 60-197 (268)
154 d1zaka1 c.37.1.1 (A:3-127,A:15 97.0 0.00015 1.1E-08 68.0 3.6 38 524-563 3-40 (189)
155 d1xp8a1 c.37.1.11 (A:15-282) R 97.0 0.0012 8.8E-08 65.1 10.4 124 520-643 53-198 (268)
156 d2cdna1 c.37.1.1 (A:1-181) Ade 97.0 0.00015 1.1E-08 67.4 3.2 28 208-235 3-30 (181)
157 d1s3ga1 c.37.1.1 (A:1-125,A:16 97.0 0.00015 1.1E-08 67.4 3.2 28 208-235 3-30 (182)
158 d1u94a1 c.37.1.11 (A:6-268) Re 97.0 0.00066 4.8E-08 66.9 8.1 78 520-597 50-146 (263)
159 d2ak3a1 c.37.1.1 (A:0-124,A:16 97.0 0.00015 1.1E-08 68.1 3.0 27 208-234 9-35 (189)
160 d1qf9a_ c.37.1.1 (A:) UMP/CMP 96.9 0.00027 2E-08 66.3 4.7 37 523-561 5-41 (194)
161 d1tf7a1 c.37.1.11 (A:14-255) C 96.9 0.0011 8E-08 63.5 9.2 60 291-359 117-176 (242)
162 d2cdna1 c.37.1.1 (A:1-181) Ade 96.9 0.00023 1.6E-08 66.1 3.9 35 526-562 2-36 (181)
163 d2i3ba1 c.37.1.11 (A:1-189) Ca 96.9 0.0002 1.5E-08 65.9 3.5 24 525-548 2-25 (189)
164 d1s3ga1 c.37.1.1 (A:1-125,A:16 96.9 0.00027 1.9E-08 65.7 4.4 34 526-561 2-35 (182)
165 d2ak3a1 c.37.1.1 (A:0-124,A:16 96.9 0.00025 1.9E-08 66.5 4.2 35 526-562 8-42 (189)
166 d1qf9a_ c.37.1.1 (A:) UMP/CMP 96.9 0.00018 1.3E-08 67.6 2.8 27 207-233 8-34 (194)
167 d1akya1 c.37.1.1 (A:3-130,A:16 96.9 0.00019 1.4E-08 66.7 2.9 27 208-234 5-31 (180)
168 d1u94a1 c.37.1.11 (A:6-268) Re 96.9 0.00031 2.3E-08 69.4 4.6 24 208-231 57-80 (263)
169 d1akya1 c.37.1.1 (A:3-130,A:16 96.9 0.0003 2.2E-08 65.2 4.3 36 525-562 3-38 (180)
170 d1m8pa3 c.37.1.15 (A:391-573) 96.9 0.00016 1.1E-08 66.4 2.2 27 524-550 6-32 (183)
171 d1e4va1 c.37.1.1 (A:1-121,A:15 96.9 0.00025 1.8E-08 65.7 3.6 28 208-235 3-30 (179)
172 d1e4va1 c.37.1.1 (A:1-121,A:15 96.8 0.00033 2.4E-08 64.8 4.2 34 526-561 2-35 (179)
173 d2qy9a2 c.37.1.10 (A:285-495) 96.8 0.00098 7.2E-08 63.2 7.6 110 208-339 12-122 (211)
174 d1ly1a_ c.37.1.1 (A:) Polynucl 96.8 0.00023 1.7E-08 63.7 2.9 22 208-229 5-26 (152)
175 d1ukza_ c.37.1.1 (A:) Uridylat 96.8 0.00034 2.5E-08 65.7 4.2 34 526-561 10-43 (196)
176 d3adka_ c.37.1.1 (A:) Adenylat 96.8 0.00027 2E-08 66.4 3.3 26 208-233 11-36 (194)
177 d1np6a_ c.37.1.10 (A:) Molybdo 96.8 0.00022 1.6E-08 64.8 2.4 29 208-236 5-33 (170)
178 d1yj5a2 c.37.1.1 (A:351-522) 5 96.7 0.00099 7.2E-08 61.3 6.8 37 522-560 12-48 (172)
179 d1teva_ c.37.1.1 (A:) UMP/CMP 96.7 0.0003 2.2E-08 65.9 3.2 26 208-233 4-29 (194)
180 d1ewqa2 c.37.1.12 (A:542-765) 96.7 0.0031 2.2E-07 60.4 10.5 102 526-642 37-160 (224)
181 d1ly1a_ c.37.1.1 (A:) Polynucl 96.7 0.00045 3.3E-08 61.7 4.1 33 527-560 5-37 (152)
182 d3adka_ c.37.1.1 (A:) Adenylat 96.7 0.00046 3.3E-08 64.8 4.3 38 524-563 8-45 (194)
183 d2a5yb3 c.37.1.20 (B:109-385) 96.7 0.0053 3.9E-07 60.8 12.5 124 525-676 45-200 (277)
184 d2qy9a2 c.37.1.10 (A:285-495) 96.7 0.0066 4.8E-07 57.3 12.4 112 523-643 8-145 (211)
185 d1teva_ c.37.1.1 (A:) UMP/CMP 96.7 0.00048 3.5E-08 64.5 4.2 35 526-562 3-37 (194)
186 d1ckea_ c.37.1.1 (A:) CMP kina 96.7 0.00035 2.5E-08 66.7 3.2 27 208-234 6-32 (225)
187 d1ckea_ c.37.1.1 (A:) CMP kina 96.6 0.00053 3.8E-08 65.4 4.3 34 527-562 6-39 (225)
188 d1vmaa2 c.37.1.10 (A:82-294) G 96.6 0.013 9.6E-07 55.2 14.1 22 208-229 14-35 (213)
189 d1nlfa_ c.37.1.11 (A:) Hexamer 96.6 0.0017 1.2E-07 64.1 8.1 22 208-229 32-53 (274)
190 d1tf7a1 c.37.1.11 (A:14-255) C 96.6 0.0033 2.4E-07 59.9 10.0 115 520-643 22-176 (242)
191 d1q3ta_ c.37.1.1 (A:) CMP kina 96.6 0.00045 3.2E-08 66.1 3.2 27 208-234 6-32 (223)
192 d1okkd2 c.37.1.10 (D:97-303) G 96.6 0.011 7.8E-07 55.6 13.0 23 208-230 9-31 (207)
193 d1okkd2 c.37.1.10 (D:97-303) G 96.6 0.0029 2.1E-07 59.7 8.8 25 524-548 6-30 (207)
194 d1khta_ c.37.1.1 (A:) Adenylat 96.6 0.00039 2.8E-08 64.1 2.6 29 207-235 3-31 (190)
195 d1q3ta_ c.37.1.1 (A:) CMP kina 96.5 0.00065 4.8E-08 64.9 4.2 34 527-562 6-39 (223)
196 d1w36d1 c.37.1.19 (D:2-360) Ex 96.5 0.0038 2.8E-07 64.2 10.3 18 208-225 166-183 (359)
197 d1x6va3 c.37.1.4 (A:34-228) Ad 96.5 0.00021 1.5E-08 66.7 0.4 27 525-551 20-46 (195)
198 d1a1va1 c.37.1.14 (A:190-325) 96.5 0.005 3.7E-07 53.6 9.7 33 525-557 9-41 (136)
199 d1mo6a1 c.37.1.11 (A:1-269) Re 96.5 0.00069 5E-08 66.9 4.1 23 208-230 63-85 (269)
200 d1cr2a_ c.37.1.11 (A:) Gene 4 96.5 0.00092 6.7E-08 66.3 5.1 24 205-228 33-58 (277)
201 d1rz3a_ c.37.1.6 (A:) Hypothet 96.5 0.0012 8.9E-08 61.2 5.5 26 208-233 25-50 (198)
202 d1mo6a1 c.37.1.11 (A:1-269) Re 96.4 0.0021 1.6E-07 63.2 7.2 124 520-643 56-201 (269)
203 d1ls1a2 c.37.1.10 (A:89-295) G 96.3 0.016 1.2E-06 54.4 12.7 23 208-230 13-35 (207)
204 d1bifa1 c.37.1.7 (A:37-249) 6- 96.3 0.0034 2.5E-07 58.8 7.9 24 526-549 4-27 (213)
205 d1g6oa_ c.37.1.11 (A:) Hexamer 96.3 0.00081 5.9E-08 68.4 3.0 72 523-594 165-246 (323)
206 d1j8yf2 c.37.1.10 (F:87-297) G 96.2 0.0046 3.4E-07 58.4 8.1 26 523-548 11-36 (211)
207 d1nksa_ c.37.1.1 (A:) Adenylat 96.2 0.00098 7.1E-08 61.5 2.8 27 208-234 4-30 (194)
208 d1w1wa_ c.37.1.12 (A:) Smc hea 96.1 0.003 2.2E-07 66.0 7.1 70 276-359 329-400 (427)
209 d1ls1a2 c.37.1.10 (A:89-295) G 96.1 0.021 1.5E-06 53.6 11.8 23 526-548 12-34 (207)
210 d1np6a_ c.37.1.10 (A:) Molybdo 96.1 0.0015 1.1E-07 59.1 3.4 23 527-549 5-27 (170)
211 d1vmaa2 c.37.1.10 (A:82-294) G 96.0 0.027 2E-06 52.9 12.5 26 523-548 10-35 (213)
212 d1gkya_ c.37.1.1 (A:) Guanylat 96.0 0.0017 1.2E-07 60.4 3.6 27 207-233 3-29 (186)
213 d2p67a1 c.37.1.10 (A:1-327) LA 96.0 0.0039 2.8E-07 63.3 6.6 97 208-307 57-154 (327)
214 d1znwa1 c.37.1.1 (A:20-201) Gu 96.0 0.0017 1.2E-07 60.1 3.4 23 208-230 5-27 (182)
215 d1j8yf2 c.37.1.10 (F:87-297) G 96.0 0.0091 6.6E-07 56.3 8.7 23 208-230 15-37 (211)
216 d1p9ra_ c.37.1.11 (A:) Extrace 96.0 0.0028 2.1E-07 66.3 5.6 72 523-594 157-238 (401)
217 d1khta_ c.37.1.1 (A:) Adenylat 95.9 0.0016 1.2E-07 59.7 3.1 25 526-550 3-27 (190)
218 d1lvga_ c.37.1.1 (A:) Guanylat 95.9 0.002 1.4E-07 60.2 3.5 26 208-233 3-28 (190)
219 g1ii8.1 c.37.1.12 (A:,B:) Rad5 95.9 0.00094 6.8E-08 67.6 1.2 57 581-658 300-356 (369)
220 d1a1va1 c.37.1.14 (A:190-325) 95.7 0.02 1.5E-06 49.5 9.6 24 208-231 11-34 (136)
221 d1xjca_ c.37.1.10 (A:) Molybdo 95.7 0.0017 1.3E-07 58.9 2.4 29 208-236 4-32 (165)
222 d1qhla_ c.37.1.12 (A:) Cell di 95.7 0.00034 2.5E-08 65.4 -2.8 34 198-231 16-50 (222)
223 d1e69a_ c.37.1.12 (A:) Smc hea 95.7 0.012 8.9E-07 58.5 8.9 67 278-359 218-286 (308)
224 d1rz3a_ c.37.1.6 (A:) Hypothet 95.6 0.0025 1.8E-07 59.0 3.0 25 527-551 25-49 (198)
225 d1cr2a_ c.37.1.11 (A:) Gene 4 95.6 0.0062 4.5E-07 60.0 6.0 38 519-556 30-71 (277)
226 d1uj2a_ c.37.1.6 (A:) Uridine- 95.5 0.0027 2E-07 60.0 3.1 25 208-232 5-29 (213)
227 d1szpa2 c.37.1.11 (A:145-395) 95.5 0.0077 5.6E-07 57.6 6.4 28 520-547 30-57 (251)
228 d1nksa_ c.37.1.1 (A:) Adenylat 95.5 0.0022 1.6E-07 59.0 2.2 25 527-551 4-28 (194)
229 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 95.5 0.0026 1.9E-07 58.1 2.5 31 198-228 5-36 (186)
230 d1m7ga_ c.37.1.4 (A:) Adenosin 95.4 0.0032 2.4E-07 59.6 3.2 25 205-229 22-48 (208)
231 d1pzna2 c.37.1.11 (A:96-349) D 95.4 0.014 9.8E-07 56.2 7.8 26 204-229 33-60 (254)
232 d1m7ga_ c.37.1.4 (A:) Adenosin 95.4 0.0058 4.3E-07 57.7 4.7 37 524-560 24-64 (208)
233 d2qtvb1 c.37.1.8 (B:24-189) SA 95.3 0.0036 2.6E-07 55.7 2.9 21 208-228 3-23 (166)
234 d1gkya_ c.37.1.1 (A:) Guanylat 95.3 0.0057 4.2E-07 56.6 4.5 27 526-552 3-29 (186)
235 d1w36d1 c.37.1.19 (D:2-360) Ex 95.3 0.012 8.5E-07 60.4 7.2 19 526-544 165-183 (359)
236 d2gj8a1 c.37.1.8 (A:216-376) P 95.3 0.031 2.3E-06 49.5 9.4 23 525-547 2-24 (161)
237 d1r8sa_ c.37.1.8 (A:) ADP-ribo 95.3 0.0037 2.7E-07 55.6 2.8 21 208-228 3-23 (160)
238 d1lvga_ c.37.1.1 (A:) Guanylat 95.2 0.0064 4.6E-07 56.5 4.4 26 527-552 3-28 (190)
239 g1xew.1 c.37.1.12 (X:,Y:) Smc 95.1 0.0024 1.7E-07 64.7 1.3 55 574-643 237-291 (329)
240 d1kgda_ c.37.1.1 (A:) Guanylat 95.1 0.006 4.4E-07 56.1 3.8 28 206-233 4-31 (178)
241 d1znwa1 c.37.1.1 (A:20-201) Gu 94.9 0.0072 5.2E-07 55.5 3.8 26 525-550 3-28 (182)
242 d1n0wa_ c.37.1.11 (A:) DNA rep 94.9 0.0098 7.1E-07 55.4 4.8 29 520-548 19-47 (242)
243 d1upta_ c.37.1.8 (A:) ADP-ribo 94.8 0.0057 4.1E-07 54.7 2.8 21 208-228 8-28 (169)
244 d1yksa1 c.37.1.14 (A:185-324) 94.8 0.026 1.9E-06 48.4 7.2 20 522-541 5-24 (140)
245 d1ctqa_ c.37.1.8 (A:) cH-p21 R 94.8 0.015 1.1E-06 52.3 5.7 21 208-228 6-26 (166)
246 d1n0wa_ c.37.1.11 (A:) DNA rep 94.8 0.0053 3.8E-07 57.4 2.5 22 208-229 26-47 (242)
247 d1uj2a_ c.37.1.6 (A:) Uridine- 94.7 0.0082 6E-07 56.5 3.6 26 526-551 4-29 (213)
248 d1odfa_ c.37.1.6 (A:) Hypothet 94.6 0.041 3E-06 54.1 8.9 22 208-229 30-51 (286)
249 d1s96a_ c.37.1.1 (A:) Guanylat 94.5 0.011 7.9E-07 55.6 4.1 23 208-230 5-27 (205)
250 d1wf3a1 c.37.1.8 (A:3-180) GTP 94.5 0.034 2.5E-06 50.4 7.4 22 526-547 7-28 (178)
251 d2cxxa1 c.37.1.8 (A:2-185) GTP 94.5 0.0064 4.7E-07 55.6 2.3 21 208-228 3-23 (184)
252 d1szpa2 c.37.1.11 (A:145-395) 94.4 0.0084 6.1E-07 57.3 3.1 25 204-228 31-57 (251)
253 d1yrba1 c.37.1.10 (A:1-244) AT 94.4 0.008 5.9E-07 57.5 3.0 23 208-230 3-25 (244)
254 d1nrjb_ c.37.1.8 (B:) Signal r 94.4 0.0092 6.7E-07 55.7 3.2 24 206-229 4-27 (209)
255 d1mkya1 c.37.1.8 (A:2-172) Pro 94.4 0.007 5.1E-07 54.8 2.3 21 208-228 3-23 (171)
256 d1e69a_ c.37.1.12 (A:) Smc hea 94.4 0.0051 3.7E-07 61.5 1.4 51 580-645 238-288 (308)
257 d2gj8a1 c.37.1.8 (A:216-376) P 94.4 0.0079 5.7E-07 53.7 2.6 21 208-228 4-24 (161)
258 d2fh5b1 c.37.1.8 (B:63-269) Si 94.4 0.075 5.5E-06 49.2 9.8 23 525-547 1-23 (207)
259 d1svia_ c.37.1.8 (A:) Probable 94.3 0.0077 5.6E-07 55.9 2.4 21 208-228 26-46 (195)
260 d2fh5b1 c.37.1.8 (B:63-269) Si 94.3 0.0086 6.3E-07 56.1 2.8 23 206-228 1-23 (207)
261 d1r8sa_ c.37.1.8 (A:) ADP-ribo 94.3 0.044 3.2E-06 48.1 7.5 23 526-548 2-24 (160)
262 d1ksha_ c.37.1.8 (A:) ADP-ribo 94.3 0.0071 5.2E-07 54.3 2.0 21 208-228 5-25 (165)
263 d1uf9a_ c.37.1.1 (A:) Dephosph 94.3 0.011 8.2E-07 54.5 3.5 24 208-232 6-29 (191)
264 d1yksa1 c.37.1.14 (A:185-324) 94.3 0.02 1.4E-06 49.2 4.9 15 208-222 10-24 (140)
265 d2qm8a1 c.37.1.10 (A:5-327) Me 94.2 0.014 1E-06 58.9 4.4 95 208-307 54-151 (323)
266 d1u0la2 c.37.1.8 (A:69-293) Pr 94.2 0.0075 5.5E-07 57.3 2.1 30 208-237 98-127 (225)
267 d1v5wa_ c.37.1.11 (A:) Meiotic 94.2 0.0095 6.9E-07 57.3 3.0 26 204-229 34-61 (258)
268 d1xjca_ c.37.1.10 (A:) Molybdo 94.2 0.012 8.6E-07 53.0 3.4 23 527-549 4-26 (165)
269 d1nn5a_ c.37.1.1 (A:) Thymidyl 94.2 0.01 7.6E-07 55.9 3.0 27 206-232 2-30 (209)
270 d1tuea_ c.37.1.20 (A:) Replica 94.1 0.011 8.1E-07 54.8 3.0 35 520-554 49-83 (205)
271 d1odfa_ c.37.1.6 (A:) Hypothet 94.0 0.094 6.8E-06 51.4 9.8 78 525-618 28-111 (286)
272 d1zj6a1 c.37.1.8 (A:2-178) ADP 93.9 0.01 7.6E-07 53.6 2.5 21 208-228 18-38 (177)
273 d1v5wa_ c.37.1.11 (A:) Meiotic 93.9 0.014 1E-06 55.9 3.6 28 520-547 33-60 (258)
274 d1htwa_ c.37.1.18 (A:) Hypothe 93.9 0.018 1.3E-06 51.3 3.9 28 205-232 31-60 (158)
275 d1uf9a_ c.37.1.1 (A:) Dephosph 93.8 0.019 1.4E-06 52.9 4.0 27 526-553 5-31 (191)
276 d4tmka_ c.37.1.1 (A:) Thymidyl 93.7 0.014 1E-06 54.8 3.1 24 208-231 5-28 (210)
277 d1sq5a_ c.37.1.6 (A:) Pantothe 93.7 0.026 1.9E-06 56.2 5.2 23 208-230 83-105 (308)
278 d1pzna2 c.37.1.11 (A:96-349) D 93.7 0.012 9.1E-07 56.4 2.6 29 520-548 32-60 (254)
279 d2a5ja1 c.37.1.8 (A:9-181) Rab 93.7 0.014 1E-06 52.9 2.8 21 208-228 6-26 (173)
280 d2f7sa1 c.37.1.8 (A:5-190) Rab 93.6 0.18 1.3E-05 45.5 10.8 21 526-546 7-27 (186)
281 d1zd9a1 c.37.1.8 (A:18-181) AD 93.6 0.015 1.1E-06 52.2 2.8 21 208-228 5-25 (164)
282 d1wb1a4 c.37.1.8 (A:1-179) Elo 93.6 0.049 3.6E-06 49.5 6.5 21 208-228 8-28 (179)
283 d2p67a1 c.37.1.10 (A:1-327) LA 93.5 0.056 4.1E-06 54.3 7.4 25 524-548 54-78 (327)
284 d1lnza2 c.37.1.8 (A:158-342) O 93.5 0.0074 5.4E-07 55.4 0.6 21 208-228 4-24 (185)
285 d1tuea_ c.37.1.20 (A:) Replica 93.5 0.015 1.1E-06 53.8 2.8 27 204-230 51-78 (205)
286 d2vp4a1 c.37.1.1 (A:12-208) De 93.5 0.0096 7E-07 55.2 1.4 24 208-231 12-35 (197)
287 d1h65a_ c.37.1.8 (A:) Chloropl 93.5 0.079 5.8E-06 51.2 8.3 23 525-547 33-55 (257)
288 d1z2aa1 c.37.1.8 (A:8-171) Rab 93.4 0.016 1.2E-06 51.9 2.8 20 208-227 5-24 (164)
289 d1tmka_ c.37.1.1 (A:) Thymidyl 93.4 0.027 2E-06 53.1 4.5 31 206-236 2-34 (214)
290 d1fzqa_ c.37.1.8 (A:) ADP-ribo 93.4 0.022 1.6E-06 51.4 3.7 20 208-227 19-38 (176)
291 d3raba_ c.37.1.8 (A:) Rab3a {R 93.4 0.017 1.2E-06 52.1 2.8 21 208-228 8-28 (169)
292 d2gjsa1 c.37.1.8 (A:91-258) Ra 93.4 0.041 3E-06 49.4 5.5 23 526-548 3-25 (168)
293 d2f9la1 c.37.1.8 (A:8-182) Rab 93.3 0.018 1.3E-06 52.3 2.8 21 208-228 7-27 (175)
294 d1ky3a_ c.37.1.8 (A:) Rab-rela 93.3 0.018 1.3E-06 52.1 2.8 21 208-228 5-25 (175)
295 d1wf3a1 c.37.1.8 (A:3-180) GTP 93.3 0.016 1.2E-06 52.7 2.5 21 208-228 8-28 (178)
296 d1kgda_ c.37.1.1 (A:) Guanylat 93.2 0.029 2.1E-06 51.3 4.2 27 525-551 4-30 (178)
297 d1t9ha2 c.37.1.8 (A:68-298) Pr 93.2 0.0065 4.7E-07 58.0 -0.4 30 208-237 100-129 (231)
298 d1ctqa_ c.37.1.8 (A:) cH-p21 R 93.2 0.06 4.4E-06 48.0 6.3 22 526-547 5-26 (166)
299 d1nlfa_ c.37.1.11 (A:) Hexamer 93.1 0.15 1.1E-05 49.3 9.8 27 521-547 26-52 (274)
300 d1kaoa_ c.37.1.8 (A:) Rap2a {H 93.1 0.019 1.4E-06 51.5 2.8 21 208-228 6-26 (167)
301 d1egaa1 c.37.1.8 (A:4-182) GTP 93.1 0.017 1.3E-06 52.3 2.4 21 208-228 8-28 (179)
302 d1jjva_ c.37.1.1 (A:) Dephosph 93.1 0.023 1.7E-06 53.2 3.4 25 208-233 5-29 (205)
303 d1kkma_ c.91.1.2 (A:) HPr kina 93.1 0.031 2.2E-06 50.8 4.1 30 524-554 14-43 (176)
304 d2ew1a1 c.37.1.8 (A:4-174) Rab 93.1 0.02 1.5E-06 51.6 2.8 21 208-228 8-28 (171)
305 d1mkya1 c.37.1.8 (A:2-172) Pro 93.0 0.14 1E-05 45.6 8.8 22 526-547 2-23 (171)
306 d2erya1 c.37.1.8 (A:10-180) r- 93.0 0.021 1.5E-06 51.5 2.8 20 208-227 8-27 (171)
307 d1z0fa1 c.37.1.8 (A:8-173) Rab 93.0 0.021 1.5E-06 51.2 2.8 21 208-228 7-27 (166)
308 d2f7sa1 c.37.1.8 (A:5-190) Rab 92.9 0.018 1.3E-06 52.8 2.3 20 208-227 8-27 (186)
309 d1zj6a1 c.37.1.8 (A:2-178) ADP 92.9 0.065 4.7E-06 48.0 6.2 24 524-547 15-38 (177)
310 d1xzpa2 c.37.1.8 (A:212-371) T 92.9 0.0079 5.7E-07 53.6 -0.3 22 208-229 3-24 (160)
311 d1g16a_ c.37.1.8 (A:) Rab-rela 92.9 0.022 1.6E-06 51.0 2.8 21 208-228 5-25 (166)
312 d1mkya2 c.37.1.8 (A:173-358) P 92.8 0.02 1.5E-06 52.3 2.5 21 208-228 11-31 (186)
313 d1udxa2 c.37.1.8 (A:157-336) O 92.8 0.012 8.5E-07 53.8 0.7 21 208-228 4-24 (180)
314 d1kkma_ c.91.1.2 (A:) HPr kina 92.8 0.02 1.5E-06 52.1 2.3 23 206-228 15-37 (176)
315 d2atva1 c.37.1.8 (A:5-172) Ras 92.7 0.024 1.8E-06 51.0 2.8 21 208-228 5-25 (168)
316 d1gsia_ c.37.1.1 (A:) Thymidyl 92.7 0.022 1.6E-06 53.0 2.6 24 208-231 3-26 (208)
317 d1vhta_ c.37.1.1 (A:) Dephosph 92.7 0.027 1.9E-06 52.8 3.1 24 208-232 6-29 (208)
318 d1htwa_ c.37.1.18 (A:) Hypothe 92.6 0.049 3.6E-06 48.4 4.7 31 521-551 30-60 (158)
319 d1xtqa1 c.37.1.8 (A:3-169) GTP 92.6 0.025 1.8E-06 50.7 2.8 21 208-228 7-27 (167)
320 d1fzqa_ c.37.1.8 (A:) ADP-ribo 92.6 0.062 4.6E-06 48.2 5.6 22 525-546 17-38 (176)
321 d2erxa1 c.37.1.8 (A:6-176) di- 92.6 0.023 1.7E-06 51.2 2.5 20 208-227 5-24 (171)
322 d2fn4a1 c.37.1.8 (A:24-196) r- 92.5 0.032 2.3E-06 50.4 3.4 21 208-228 9-29 (173)
323 d1knxa2 c.91.1.2 (A:133-309) H 92.5 0.022 1.6E-06 51.9 2.2 22 206-227 16-37 (177)
324 d1yzqa1 c.37.1.8 (A:14-177) Ra 92.5 0.027 1.9E-06 50.3 2.8 21 208-228 3-23 (164)
325 d1z08a1 c.37.1.8 (A:17-183) Ra 92.5 0.027 2E-06 50.5 2.8 20 208-227 6-25 (167)
326 d2qm8a1 c.37.1.10 (A:5-327) Me 92.4 0.14 1.1E-05 51.1 8.6 24 525-548 52-75 (323)
327 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 92.4 0.027 2E-06 51.4 2.8 20 208-227 5-24 (184)
328 d1puia_ c.37.1.8 (A:) Probable 92.4 0.011 7.9E-07 53.8 -0.1 21 208-228 19-39 (188)
329 d1z06a1 c.37.1.8 (A:32-196) Ra 92.4 0.029 2.1E-06 50.1 2.8 20 208-227 5-24 (165)
330 d1s96a_ c.37.1.1 (A:) Guanylat 92.3 0.045 3.2E-06 51.2 4.3 25 525-549 3-27 (205)
331 d2i1qa2 c.37.1.11 (A:65-322) D 92.3 0.032 2.3E-06 53.0 3.3 26 204-229 31-58 (258)
332 d2bmea1 c.37.1.8 (A:6-179) Rab 92.3 0.029 2.1E-06 50.6 2.8 20 208-227 8-27 (174)
333 d1x3sa1 c.37.1.8 (A:2-178) Rab 92.3 0.03 2.2E-06 50.8 2.8 21 208-228 10-30 (177)
334 d1jjva_ c.37.1.1 (A:) Dephosph 92.2 0.043 3.1E-06 51.2 4.0 27 527-554 5-31 (205)
335 d1w1wa_ c.37.1.12 (A:) Smc hea 92.2 0.026 1.9E-06 58.5 2.7 57 575-645 346-402 (427)
336 d1r2qa_ c.37.1.8 (A:) Rab5a {H 92.2 0.031 2.2E-06 50.3 2.8 21 208-228 9-29 (170)
337 d2gjsa1 c.37.1.8 (A:91-258) Ra 92.2 0.028 2E-06 50.6 2.5 21 208-228 4-24 (168)
338 d1sq5a_ c.37.1.6 (A:) Pantothe 92.2 0.073 5.3E-06 52.9 5.9 39 523-561 79-122 (308)
339 d2i1qa2 c.37.1.11 (A:65-322) D 92.2 0.045 3.3E-06 51.9 4.2 41 508-548 16-58 (258)
340 d1knxa2 c.91.1.2 (A:133-309) H 92.2 0.04 2.9E-06 50.1 3.5 30 523-553 14-43 (177)
341 d1yrba1 c.37.1.10 (A:1-244) AT 92.1 0.037 2.7E-06 52.6 3.5 22 527-548 3-24 (244)
342 d1z0ja1 c.37.1.8 (A:2-168) Rab 92.1 0.032 2.3E-06 50.0 2.8 21 208-228 7-27 (167)
343 d1upta_ c.37.1.8 (A:) ADP-ribo 92.1 0.043 3.1E-06 48.5 3.7 23 525-547 6-28 (169)
344 d2qtvb1 c.37.1.8 (B:24-189) SA 92.1 0.037 2.7E-06 48.6 3.2 22 526-547 2-23 (166)
345 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 92.0 0.033 2.4E-06 50.4 2.8 21 208-228 5-25 (177)
346 d1vhta_ c.37.1.1 (A:) Dephosph 91.9 0.051 3.7E-06 50.8 4.1 26 527-553 6-31 (208)
347 d1ko7a2 c.91.1.2 (A:130-298) H 91.9 0.051 3.7E-06 49.0 3.9 24 524-547 15-38 (169)
348 d1wmsa_ c.37.1.8 (A:) Rab9a {H 91.8 0.036 2.6E-06 50.0 2.8 20 208-227 9-28 (174)
349 d2g6ba1 c.37.1.8 (A:58-227) Ra 91.8 0.036 2.7E-06 49.8 2.8 20 208-227 9-28 (170)
350 d1ko7a2 c.91.1.2 (A:130-298) H 91.8 0.032 2.3E-06 50.4 2.3 23 206-228 16-38 (169)
351 d2vp4a1 c.37.1.1 (A:12-208) De 91.8 0.033 2.4E-06 51.3 2.5 29 525-553 10-38 (197)
352 d2bcgy1 c.37.1.8 (Y:3-196) GTP 91.7 0.036 2.6E-06 51.1 2.8 21 208-228 9-29 (194)
353 d1e0sa_ c.37.1.8 (A:) ADP-ribo 91.7 0.02 1.5E-06 51.7 0.9 21 208-228 15-35 (173)
354 d1h65a_ c.37.1.8 (A:) Chloropl 91.6 0.033 2.4E-06 54.1 2.5 22 208-229 35-56 (257)
355 d1deka_ c.37.1.1 (A:) Deoxynuc 91.6 0.04 2.9E-06 52.6 3.0 24 208-231 4-27 (241)
356 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 91.6 0.04 2.9E-06 49.5 2.8 21 208-228 6-26 (170)
357 d1u0ja_ c.37.1.20 (A:) Rep 40 91.6 0.06 4.4E-06 52.5 4.3 57 523-594 103-159 (267)
358 d2g3ya1 c.37.1.8 (A:73-244) GT 91.6 0.034 2.4E-06 50.2 2.3 21 208-228 6-26 (172)
359 d1u8za_ c.37.1.8 (A:) Ras-rela 91.5 0.041 3E-06 49.4 2.8 20 208-227 7-26 (168)
360 d1p5zb_ c.37.1.1 (B:) Deoxycyt 91.5 0.022 1.6E-06 54.2 0.9 23 208-230 5-27 (241)
361 d1moza_ c.37.1.8 (A:) ADP-ribo 91.4 0.029 2.1E-06 51.1 1.6 20 208-227 20-39 (182)
362 d1c1ya_ c.37.1.8 (A:) Rap1A {H 91.4 0.042 3.1E-06 49.1 2.8 21 208-228 6-26 (167)
363 d1qhla_ c.37.1.12 (A:) Cell di 91.4 0.018 1.3E-06 52.9 0.1 23 527-549 27-49 (222)
364 d1deka_ c.37.1.1 (A:) Deoxynuc 91.4 0.048 3.5E-06 52.0 3.3 26 527-552 4-29 (241)
365 d1x1ra1 c.37.1.8 (A:10-178) Ra 91.3 0.045 3.2E-06 49.2 2.8 21 208-228 7-27 (169)
366 d1ksha_ c.37.1.8 (A:) ADP-ribo 91.2 0.04 2.9E-06 49.1 2.3 23 526-548 4-26 (165)
367 d1mh1a_ c.37.1.8 (A:) Rac {Hum 91.2 0.046 3.3E-06 49.8 2.8 21 208-228 8-28 (183)
368 d2fu5c1 c.37.1.8 (C:3-175) Rab 91.2 0.027 2E-06 50.9 1.2 20 208-227 9-28 (173)
369 d1nn5a_ c.37.1.1 (A:) Thymidyl 91.1 0.062 4.5E-06 50.3 3.7 30 526-555 5-37 (209)
370 d1a7ja_ c.37.1.6 (A:) Phosphor 91.1 0.021 1.5E-06 56.3 0.2 24 208-231 7-30 (288)
371 d4tmka_ c.37.1.1 (A:) Thymidyl 91.1 0.06 4.4E-06 50.2 3.6 25 525-549 3-27 (210)
372 d1uaaa1 c.37.1.19 (A:2-307) DE 91.0 0.034 2.5E-06 54.9 1.9 20 208-227 17-37 (306)
373 d2ocpa1 c.37.1.1 (A:37-277) De 90.8 0.078 5.7E-06 50.3 4.3 30 524-553 2-31 (241)
374 d1i2ma_ c.37.1.8 (A:) Ran {Hum 90.7 0.029 2.1E-06 50.6 0.8 21 208-228 6-26 (170)
375 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 90.6 0.049 3.6E-06 49.0 2.5 24 524-547 13-36 (186)
376 d1gsia_ c.37.1.1 (A:) Thymidyl 90.6 0.064 4.7E-06 49.6 3.4 29 527-555 3-34 (208)
377 d2p6ra3 c.37.1.19 (A:1-202) He 90.6 0.099 7.2E-06 48.3 4.7 19 524-542 40-58 (202)
378 d1m7ba_ c.37.1.8 (A:) RhoE (RN 90.5 0.057 4.2E-06 49.0 2.8 21 208-228 5-25 (179)
379 d1xpua3 c.37.1.11 (A:129-417) 90.5 0.063 4.6E-06 52.6 3.2 28 203-230 39-68 (289)
380 d1pjra1 c.37.1.19 (A:1-318) DE 90.5 0.046 3.4E-06 54.4 2.3 15 208-222 27-41 (318)
381 d1tmka_ c.37.1.1 (A:) Thymidyl 90.5 0.12 8.6E-06 48.4 5.1 32 525-556 4-35 (214)
382 d2a5ja1 c.37.1.8 (A:9-181) Rab 90.4 0.067 4.9E-06 48.1 3.2 22 526-547 5-26 (173)
383 d2atxa1 c.37.1.8 (A:9-193) Rho 90.4 0.058 4.2E-06 49.2 2.8 21 208-228 12-32 (185)
384 d1u0ja_ c.37.1.20 (A:) Rep 40 90.4 0.062 4.5E-06 52.4 3.1 24 208-231 107-130 (267)
385 d2ngra_ c.37.1.8 (A:) CDC42 {H 90.4 0.059 4.3E-06 49.4 2.8 21 208-228 6-26 (191)
386 d1puia_ c.37.1.8 (A:) Probable 90.1 0.31 2.2E-05 43.4 7.7 23 524-546 16-38 (188)
387 d1zd9a1 c.37.1.8 (A:18-181) AD 90.1 0.075 5.4E-06 47.2 3.2 22 526-547 4-25 (164)
388 d1nrjb_ c.37.1.8 (B:) Signal r 90.1 0.072 5.3E-06 49.2 3.2 23 526-548 5-27 (209)
389 d1z2aa1 c.37.1.8 (A:8-171) Rab 90.0 0.078 5.7E-06 47.1 3.2 21 526-546 4-24 (164)
390 d2ocpa1 c.37.1.1 (A:37-277) De 90.0 0.062 4.5E-06 51.1 2.6 26 207-232 4-29 (241)
391 d3raba_ c.37.1.8 (A:) Rab3a {R 89.8 0.082 6E-06 47.3 3.2 22 526-547 7-28 (169)
392 d2jdid3 c.37.1.11 (D:82-357) C 89.7 0.99 7.2E-05 43.4 11.3 27 203-229 64-92 (276)
393 d1e0sa_ c.37.1.8 (A:) ADP-ribo 89.6 0.13 9.3E-06 46.1 4.4 24 525-548 13-36 (173)
394 d1a7ja_ c.37.1.6 (A:) Phosphor 89.4 0.1 7.3E-06 51.2 3.7 34 527-560 7-43 (288)
395 d2f9la1 c.37.1.8 (A:8-182) Rab 89.3 0.093 6.7E-06 47.2 3.2 22 526-547 6-27 (175)
396 d2b8ta1 c.37.1.24 (A:11-149) T 89.2 0.26 1.9E-05 42.7 5.9 31 528-558 6-39 (139)
397 d1kaoa_ c.37.1.8 (A:) Rap2a {H 89.1 0.1 7.3E-06 46.4 3.2 22 526-547 5-26 (167)
398 d2bmja1 c.37.1.8 (A:66-240) Ce 89.0 0.091 6.6E-06 47.5 2.9 21 208-228 8-28 (175)
399 d1ky3a_ c.37.1.8 (A:) Rab-rela 88.9 0.11 7.7E-06 46.6 3.2 21 526-546 4-24 (175)
400 d2ew1a1 c.37.1.8 (A:4-174) Rab 88.8 0.099 7.2E-06 46.7 3.0 22 526-547 7-28 (171)
401 d1z08a1 c.37.1.8 (A:17-183) Ra 88.8 0.11 7.9E-06 46.2 3.2 21 526-546 5-25 (167)
402 d2cxxa1 c.37.1.8 (A:2-185) GTP 88.8 0.081 5.9E-06 47.7 2.3 22 526-547 2-23 (184)
403 d1zcba2 c.37.1.8 (A:47-75,A:20 88.7 0.085 6.2E-06 48.3 2.5 19 208-226 5-23 (200)
404 d1z0fa1 c.37.1.8 (A:8-173) Rab 88.7 0.11 8.1E-06 46.1 3.2 22 526-547 6-27 (166)
405 d1svia_ c.37.1.8 (A:) Probable 88.5 0.088 6.4E-06 48.2 2.5 21 526-546 25-45 (195)
406 d2erya1 c.37.1.8 (A:10-180) r- 88.5 0.11 7.9E-06 46.4 3.1 21 526-546 7-27 (171)
407 d1g16a_ c.37.1.8 (A:) Rab-rela 88.5 0.11 7.9E-06 46.1 3.0 22 526-547 4-25 (166)
408 d1p5zb_ c.37.1.1 (B:) Deoxycyt 88.4 0.06 4.3E-06 51.0 1.2 26 525-550 3-28 (241)
409 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 88.3 0.12 8.8E-06 46.8 3.2 21 526-546 4-24 (184)
410 d2fz4a1 c.37.1.19 (A:24-229) D 88.3 0.43 3.2E-05 43.9 7.3 26 208-233 88-113 (206)
411 d2atva1 c.37.1.8 (A:5-172) Ras 88.2 0.12 9E-06 46.0 3.2 22 526-547 4-25 (168)
412 d1uaaa1 c.37.1.19 (A:2-307) DE 88.2 0.13 9.3E-06 50.4 3.6 21 525-545 15-36 (306)
413 d2erxa1 c.37.1.8 (A:6-176) di- 88.1 0.12 8.4E-06 46.2 2.9 21 526-546 4-24 (171)
414 d1wb1a4 c.37.1.8 (A:1-179) Elo 88.0 1 7.4E-05 40.1 9.6 22 526-547 7-28 (179)
415 d1fx0a3 c.37.1.11 (A:97-372) C 87.9 0.79 5.7E-05 44.2 9.2 29 203-231 63-93 (276)
416 d1xtqa1 c.37.1.8 (A:3-169) GTP 87.8 0.099 7.2E-06 46.5 2.3 23 525-547 5-27 (167)
417 d1azta2 c.37.1.8 (A:35-65,A:20 87.8 0.11 8E-06 48.9 2.7 19 208-226 9-27 (221)
418 d1r2qa_ c.37.1.8 (A:) Rab5a {H 87.8 0.14 9.9E-06 45.7 3.2 22 526-547 8-29 (170)
419 d1z06a1 c.37.1.8 (A:32-196) Ra 87.7 0.14 1E-05 45.2 3.2 22 526-547 4-25 (165)
420 d1x3sa1 c.37.1.8 (A:2-178) Rab 87.7 0.14 1E-05 46.1 3.2 22 525-546 8-29 (177)
421 d2bv3a2 c.37.1.8 (A:7-282) Elo 87.6 0.9 6.5E-05 43.8 9.4 24 525-548 7-30 (276)
422 d1s2ma1 c.37.1.19 (A:46-251) P 87.6 0.57 4.2E-05 43.0 7.7 167 169-352 2-183 (206)
423 d1yzqa1 c.37.1.8 (A:14-177) Ra 87.5 0.14 9.9E-06 45.3 3.0 21 526-546 2-22 (164)
424 d1wmsa_ c.37.1.8 (A:) Rab9a {H 87.5 0.15 1.1E-05 45.7 3.2 22 526-547 8-29 (174)
425 d2bmea1 c.37.1.8 (A:6-179) Rab 87.4 0.14 1E-05 45.8 3.0 21 526-546 7-27 (174)
426 d1z0ja1 c.37.1.8 (A:2-168) Rab 87.2 0.16 1.1E-05 45.1 3.2 21 526-546 6-26 (167)
427 d2fn4a1 c.37.1.8 (A:24-196) r- 87.2 0.15 1.1E-05 45.7 3.1 22 526-547 8-29 (173)
428 d1mkya2 c.37.1.8 (A:173-358) P 87.1 0.16 1.1E-05 45.9 3.2 25 523-547 7-31 (186)
429 d1u0la2 c.37.1.8 (A:69-293) Pr 86.8 0.14 1E-05 48.2 2.7 29 524-552 95-123 (225)
430 d2g6ba1 c.37.1.8 (A:58-227) Ra 86.7 0.17 1.2E-05 45.1 3.2 21 526-546 8-28 (170)
431 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 86.7 0.17 1.2E-05 45.0 3.2 22 526-547 5-26 (170)
432 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 86.6 0.16 1.2E-05 45.5 3.0 23 525-547 3-25 (177)
433 d1pjra1 c.37.1.19 (A:1-318) DE 86.5 0.19 1.4E-05 49.6 3.8 23 525-547 25-48 (318)
434 d2bcgy1 c.37.1.8 (Y:3-196) GTP 86.3 0.17 1.2E-05 46.3 3.0 22 526-547 8-29 (194)
435 d1u8za_ c.37.1.8 (A:) Ras-rela 86.3 0.18 1.3E-05 44.8 3.2 21 526-546 6-26 (168)
436 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 86.3 0.16 1.1E-05 46.1 2.8 22 208-229 5-26 (200)
437 d1qdea_ c.37.1.19 (A:) Initiat 86.3 0.68 5E-05 42.8 7.4 170 169-352 11-191 (212)
438 d1moza_ c.37.1.8 (A:) ADP-ribo 86.2 0.13 9.7E-06 46.3 2.2 26 521-546 14-39 (182)
439 d1mh1a_ c.37.1.8 (A:) Rac {Hum 86.2 0.16 1.2E-05 45.9 2.7 23 525-547 6-28 (183)
440 d1c1ya_ c.37.1.8 (A:) Rap1A {H 86.0 0.19 1.4E-05 44.5 3.2 22 526-547 5-26 (167)
441 d1xzpa2 c.37.1.8 (A:212-371) T 86.0 0.073 5.3E-06 46.9 0.2 23 526-548 2-24 (160)
442 d1tq4a_ c.37.1.8 (A:) Interfer 85.8 0.15 1.1E-05 52.7 2.5 22 207-228 58-79 (400)
443 d2g3ya1 c.37.1.8 (A:73-244) GT 85.6 0.18 1.3E-05 45.1 2.7 22 526-547 5-26 (172)
444 d1veca_ c.37.1.19 (A:) DEAD bo 85.4 1.3 9.2E-05 40.6 8.8 17 524-540 40-56 (206)
445 d2jdid3 c.37.1.11 (D:82-357) C 85.4 1.4 0.0001 42.4 9.3 65 520-590 64-139 (276)
446 d1x1ra1 c.37.1.8 (A:10-178) Ra 85.2 0.2 1.5E-05 44.6 2.9 23 525-547 5-27 (169)
447 d1hv8a1 c.37.1.19 (A:3-210) Pu 85.1 0.92 6.7E-05 41.7 7.7 21 207-227 44-64 (208)
448 d2fu5c1 c.37.1.8 (C:3-175) Rab 85.1 0.14 9.8E-06 45.9 1.6 21 526-546 8-28 (173)
449 d1m7ba_ c.37.1.8 (A:) RhoE (RN 84.9 0.22 1.6E-05 44.8 3.0 22 526-547 4-25 (179)
450 d2atxa1 c.37.1.8 (A:9-193) Rho 84.3 0.25 1.8E-05 44.7 3.1 22 526-547 11-32 (185)
451 d1g7sa4 c.37.1.8 (A:1-227) Ini 84.2 0.24 1.8E-05 46.6 3.1 22 208-229 8-29 (227)
452 d1lnza2 c.37.1.8 (A:158-342) O 84.2 0.19 1.4E-05 45.4 2.2 21 526-546 3-23 (185)
453 d1egaa1 c.37.1.8 (A:4-182) GTP 84.1 0.24 1.7E-05 44.2 2.8 21 527-547 8-28 (179)
454 d1i2ma_ c.37.1.8 (A:) Ran {Hum 83.9 0.14 1E-05 45.8 1.1 22 526-547 5-26 (170)
455 d1nija1 c.37.1.10 (A:2-223) Hy 83.7 0.19 1.4E-05 47.3 2.0 21 208-228 6-26 (222)
456 d1nija1 c.37.1.10 (A:2-223) Hy 83.5 0.86 6.3E-05 42.4 6.8 22 527-548 6-27 (222)
457 d2ngra_ c.37.1.8 (A:) CDC42 {H 83.5 0.27 2E-05 44.6 3.0 22 526-547 5-26 (191)
458 d1ni3a1 c.37.1.8 (A:11-306) Yc 83.5 0.24 1.7E-05 48.8 2.7 21 208-228 13-33 (296)
459 d1svsa1 c.37.1.8 (A:32-60,A:18 83.2 0.3 2.2E-05 43.9 3.2 22 208-229 5-26 (195)
460 d1udxa2 c.37.1.8 (A:157-336) O 82.7 0.22 1.6E-05 44.6 2.0 22 526-547 3-24 (180)
461 d1d2ea3 c.37.1.8 (A:55-250) El 82.1 0.7 5.1E-05 42.2 5.3 23 207-229 5-27 (196)
462 d1wxqa1 c.37.1.8 (A:1-319) GTP 82.0 0.25 1.8E-05 49.0 2.2 21 208-228 3-23 (319)
463 d1e9ra_ c.37.1.11 (A:) Bacteri 81.7 0.48 3.5E-05 48.8 4.5 34 524-557 50-86 (433)
464 d1p6xa_ c.37.1.1 (A:) Thymidin 81.6 0.3 2.2E-05 48.8 2.7 25 208-232 9-33 (333)
465 d1t9ha2 c.37.1.8 (A:68-298) Pr 81.6 0.12 8.5E-06 48.9 -0.5 29 524-552 97-125 (231)
466 d2bmfa2 c.37.1.14 (A:178-482) 81.6 0.28 2E-05 47.8 2.4 105 202-311 6-112 (305)
467 d1xpua3 c.37.1.11 (A:129-417) 81.3 0.45 3.3E-05 46.3 3.8 29 520-548 39-67 (289)
468 d1zcba2 c.37.1.8 (A:47-75,A:20 81.1 0.36 2.6E-05 43.7 2.9 20 526-545 4-23 (200)
469 d2dy1a2 c.37.1.8 (A:8-274) Elo 81.0 0.33 2.4E-05 46.9 2.6 25 206-230 3-27 (267)
470 d2bmja1 c.37.1.8 (A:66-240) Ce 80.3 0.46 3.3E-05 42.5 3.2 24 525-548 6-29 (175)
471 d2fz4a1 c.37.1.19 (A:24-229) D 79.7 0.77 5.6E-05 42.1 4.7 33 525-557 86-118 (206)
472 d1e9ra_ c.37.1.11 (A:) Bacteri 79.4 0.37 2.7E-05 49.7 2.6 73 583-675 276-358 (433)
473 d1azta2 c.37.1.8 (A:35-65,A:20 79.0 0.45 3.3E-05 44.3 2.9 23 525-547 7-29 (221)
474 d1jala1 c.37.1.8 (A:1-278) Ych 78.7 0.45 3.3E-05 46.1 2.8 21 208-228 5-25 (278)
475 d1ihua1 c.37.1.10 (A:1-296) Ar 78.4 0.97 7.1E-05 43.5 5.3 27 522-548 6-32 (296)
476 d1osna_ c.37.1.1 (A:) Thymidin 78.3 0.36 2.7E-05 48.1 2.0 25 208-232 8-32 (331)
477 d1p6xa_ c.37.1.1 (A:) Thymidin 78.1 0.5 3.6E-05 47.1 3.0 26 525-550 7-32 (333)
478 d1hv8a1 c.37.1.19 (A:3-210) Pu 77.9 1.4 0.0001 40.2 6.1 21 525-545 43-63 (208)
479 d2bv3a2 c.37.1.8 (A:7-282) Elo 76.4 0.53 3.8E-05 45.6 2.5 25 206-230 7-31 (276)
480 d2jdia3 c.37.1.11 (A:95-379) C 76.0 0.72 5.3E-05 44.7 3.4 26 203-228 64-91 (285)
481 d2c78a3 c.37.1.8 (A:9-212) Elo 76.0 0.47 3.4E-05 43.7 1.9 24 207-230 5-28 (204)
482 d1e2ka_ c.37.1.1 (A:) Thymidin 75.9 0.38 2.8E-05 47.8 1.3 24 208-231 7-30 (329)
483 d2b8ta1 c.37.1.24 (A:11-149) T 74.8 5.6 0.00041 33.6 8.7 20 208-227 5-25 (139)
484 d1osna_ c.37.1.1 (A:) Thymidin 74.7 0.66 4.8E-05 46.1 2.8 25 526-550 7-31 (331)
485 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 74.6 0.76 5.5E-05 41.2 3.0 23 526-548 4-26 (200)
486 g1xew.1 c.37.1.12 (X:,Y:) Smc 74.4 2.8 0.00021 40.7 7.7 69 276-359 221-291 (329)
487 d1j3ba1 c.91.1.1 (A:212-529) P 74.2 0.52 3.8E-05 46.3 1.8 15 208-222 17-31 (318)
488 d1ihua1 c.37.1.10 (A:1-296) Ar 73.9 0.81 5.9E-05 44.1 3.2 27 203-229 6-32 (296)
489 d1wp9a1 c.37.1.19 (A:1-200) pu 73.9 0.96 7E-05 40.8 3.5 22 525-546 24-45 (200)
490 d2dy1a2 c.37.1.8 (A:8-274) Elo 73.1 0.91 6.6E-05 43.6 3.3 24 525-548 3-26 (267)
491 d2eyqa3 c.37.1.19 (A:546-778) 73.1 2 0.00014 40.2 5.6 44 517-560 69-115 (233)
492 d1g5ta_ c.37.1.11 (A:) ATP:cor 72.4 8.8 0.00064 33.1 9.5 46 297-355 92-137 (157)
493 d1c9ka_ c.37.1.11 (A:) Adenosy 72.3 1.5 0.00011 39.2 4.4 105 208-355 2-136 (180)
494 d1e2ka_ c.37.1.1 (A:) Thymidin 71.9 0.79 5.7E-05 45.4 2.5 26 526-551 6-31 (329)
495 d2c78a3 c.37.1.8 (A:9-212) Elo 71.5 0.89 6.5E-05 41.7 2.7 24 524-547 3-26 (204)
496 d2ncda_ c.37.1.9 (A:) Kinesin 71.3 2.8 0.0002 42.0 6.7 15 208-222 128-142 (368)
497 d2olra1 c.91.1.1 (A:228-540) P 71.2 0.69 5E-05 45.2 1.8 15 208-222 17-31 (313)
498 d1gm5a3 c.37.1.19 (A:286-549) 70.5 2.8 0.00021 39.8 6.2 45 518-562 98-145 (264)
499 d1svsa1 c.37.1.8 (A:32-60,A:18 70.0 1.1 7.8E-05 39.9 2.9 23 526-548 4-26 (195)
500 d1g7sa4 c.37.1.8 (A:1-227) Ini 69.4 1.3 9.7E-05 41.1 3.5 22 527-548 8-29 (227)
No 1
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=5.5e-41 Score=343.64 Aligned_cols=250 Identities=40% Similarity=0.685 Sum_probs=223.6
Q ss_pred CCCCCCCcccccChHHHHHHHHHHhhccCCChHHHhhhCCCCCCCceEEcCCCChHHHHHHHHHHhcCCCceeeeccccc
Q psy11254 163 EDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242 (741)
Q Consensus 163 ~~~~~~~~~~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~GvlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~ 242 (741)
++.+.++|+||||++++|++|++.+.+ +.+++.|+++|..+++|++|+||||||||+++++||++++.++..+..
T Consensus 4 ~~~~~~t~~Di~Gl~~~k~~l~e~v~~-~~~~~~~~~~g~~~~~~iLL~GppGtGKT~la~~iA~~~~~~~~~i~~---- 78 (256)
T d1lv7a_ 4 EDQIKTTFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISG---- 78 (256)
T ss_dssp ECSSCCCGGGSCSCHHHHHHTHHHHHH-HHCGGGC-----CCCCEEEEECCTTSCHHHHHHHHHHHHTCCEEEECS----
T ss_pred CCCCCCCHHHHhchHHHHHHHHHHHHH-HHCHHHHHHcCCCCCCeEEeeCCCCCCccHHHHHHHHHcCCCEEEEEh----
Confidence 466789999999999999999999876 778899999999999999999999999999999999999999988875
Q ss_pred chhhHHHHHhhhhhhhcccccccccccCCCccchhhhhcchHHHHHHHHHHHHHhcCCeEEEeccccccccccCCCCCCc
Q psy11254 243 TSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSA 322 (741)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~~~~~~p~~~l 322 (741)
+.+.+.|.|+++++++++|..|..++||||||||+|++++.|.+...+.
T Consensus 79 -------------------------------~~l~~~~~g~~~~~l~~~f~~A~~~~P~il~iDeiD~l~~~r~~~~~~~ 127 (256)
T d1lv7a_ 79 -------------------------------SDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGG 127 (256)
T ss_dssp -------------------------------CSSTTSCCCCCHHHHHHHHHHHHTTCSEEEEETTHHHHTCCCSTTSCCT
T ss_pred -------------------------------HHhhhcchhHHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCCCC
Confidence 6667889999999999999999999999999999999999887666666
Q ss_pred cHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCCccccCCCccceeeecCCCCHHHHHhccccchhccCCCcccCCC
Q psy11254 323 DREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEI 402 (741)
Q Consensus 323 D~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld~al~r~gr~d~~i~~~~p~~~~r~~i~~~l~~~~~~~~~~~~~ 402 (741)
+....+.+..++..++++....++.||+|||+++.+|++++|+||||+.++++.|+.++|.+| ++.+...+....++
T Consensus 128 ~~~~~~~~~~ll~~~d~~~~~~~v~vIatTn~~~~ld~al~R~gRfd~~i~i~~P~~~~R~~i---l~~~l~~~~~~~~~ 204 (256)
T d1lv7a_ 128 HDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQI---LKVHMRRVPLAPDI 204 (256)
T ss_dssp TCHHHHHHHHHHHHHHTCCSSSCEEEEEEESCTTTSCGGGGSTTSSCEEEECCCCCHHHHHHH---HHHHHTTSCBCTTC
T ss_pred cHHHHHHHHHHHHHhhCCCCCCCEEEEEeCCCcccCCHhHcCCCCCCEEEECCCcCHHHHHHH---HHHhccCCCcCccc
Confidence 666677788899999887777889999999999999999999999999999999999999999 66777777777889
Q ss_pred CHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccccchHhHHHHHHHhc
Q psy11254 403 DYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVS 451 (741)
Q Consensus 403 ~~~~la~~t~g~~gadi~~l~~~A~~~a~~~~~~~i~~~d~~~a~~~~~ 451 (741)
++..+++.|+||+|+||.++|++|+..+.++.+..++.+|+.+|++++.
T Consensus 205 ~~~~la~~t~G~s~adi~~l~~~A~~~a~~~~~~~i~~~d~~~Al~rv~ 253 (256)
T d1lv7a_ 205 DAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIM 253 (256)
T ss_dssp CHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHHT
T ss_pred CHHHHHHhCCCCCHHHHHHHHHHHHHHHHHcCCCccCHHHHHHHHHHHh
Confidence 9999999999999999999999999999998888999999999998764
No 2
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=2.1e-40 Score=337.98 Aligned_cols=245 Identities=42% Similarity=0.696 Sum_probs=218.6
Q ss_pred CCCCCCcccccChHHHHHHHHHHhhccCCChHHHhhhCCCCCCCceEEcCCCChHHHHHHHHHHhcCCCceeeecccccc
Q psy11254 164 DPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVT 243 (741)
Q Consensus 164 ~~~~~~~~~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~GvlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~~ 243 (741)
+.|+++|+||+|++++|++|.+.+.. +.+++.|+..|...++|++|+||||||||+++++||++++.++..+..
T Consensus 2 ~~p~~~~~di~G~~~~k~~l~~~i~~-l~~~~~~~~~g~~~~~giLl~GppGtGKT~la~aia~~~~~~~~~i~~----- 75 (247)
T d1ixza_ 2 EAPKVTFKDVAGAEEAKEELKEIVEF-LKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASG----- 75 (247)
T ss_dssp CCCSCCGGGCCSCHHHHHHHHHHHHH-HHCHHHHHHTTCCCCSEEEEECCTTSSHHHHHHHHHHHTTCCEEEEEH-----
T ss_pred CCCCCcHHHHccHHHHHHHHHHHHHH-HHCHHHHHHcCCCCCceEEEecCCCCChhHHHHHHHHHcCCCEEEEEh-----
Confidence 56889999999999999999998775 788999999999999999999999999999999999999999988875
Q ss_pred hhhHHHHHhhhhhhhcccccccccccCCCccchhhhhcchHHHHHHHHHHHHHhcCCeEEEeccccccccccCCCCCCcc
Q psy11254 244 SKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSAD 323 (741)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~~~~~~p~~~lD 323 (741)
+.+.++|.|+.+++++++|..|..++|+||||||+|++++++.....+.+
T Consensus 76 ------------------------------~~l~~~~~g~~~~~l~~~f~~a~~~~p~Ii~iDeid~l~~~r~~~~~~~~ 125 (247)
T d1ixza_ 76 ------------------------------SDFVEMFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGN 125 (247)
T ss_dssp ------------------------------HHHHHSCTTHHHHHHHHHHHHHTTSSSEEEEEETHHHHHC---------C
T ss_pred ------------------------------HHhhhccccHHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCCCCc
Confidence 56778899999999999999999999999999999999999877777777
Q ss_pred HHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCCccccCCCccceeeecCCCCHHHHHhccccchhccCCCcccCCCC
Q psy11254 324 REIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEID 403 (741)
Q Consensus 324 ~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld~al~r~gr~d~~i~~~~p~~~~r~~i~~~l~~~~~~~~~~~~~~ 403 (741)
....+.+..++..|+++....++.||+|||+++.+|++++|+||||..|+++.|+.++|.+| ++.+........+++
T Consensus 126 ~~~~~~~~~ll~~~d~~~~~~~vivi~tTn~~~~ld~al~R~~Rf~~~i~~~~P~~~eR~~i---l~~~l~~~~~~~~~~ 202 (247)
T d1ixza_ 126 DEREQTLNQLLVEMDGFEKDTAIVVMAATNRPDILDPALLRPGRFDRQIAIDAPDVKGREQI---LRIHARGKPLAEDVD 202 (247)
T ss_dssp HHHHHHHHHHHHHHHTCCTTCCEEEEEEESCGGGSCGGGGSTTSSCEEEECCSCCHHHHHHH---HHHHHTTSCBCTTCC
T ss_pred HHHHHHHHHHHHHhhCCCCCCCEEEEEeCCCccccCHhHcCCCCCcEEEEECCcCHHHHHHH---HHHHhcccCCccccC
Confidence 77888889999999988777899999999999999999999999999999999999999998 677777777778899
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccccchHhHHHHH
Q psy11254 404 YEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447 (741)
Q Consensus 404 ~~~la~~t~g~~gadi~~l~~~A~~~a~~~~~~~i~~~d~~~a~ 447 (741)
+..+++.|+||+|+||.++|++|++.++++.+..++.+|+.+|+
T Consensus 203 ~~~la~~t~g~s~~di~~lv~~A~l~a~~~~~~~i~~~d~~~A~ 246 (247)
T d1ixza_ 203 LALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAA 246 (247)
T ss_dssp HHHHHHTCTTCCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHT
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHhh
Confidence 99999999999999999999999999999888899999998875
No 3
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=5.6e-38 Score=323.10 Aligned_cols=227 Identities=42% Similarity=0.749 Sum_probs=201.7
Q ss_pred CCcccccChHHHHHHHHHHhhccCCChHHHhhhCCCCCCCceEEcCCCChHHHHHHHHHHhcCCCceeeecccccchhhH
Q psy11254 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKED 247 (741)
Q Consensus 168 ~~~~~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~GvlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~~~~~~ 247 (741)
|+|+||||++++|++|++.+.+|+.+++.|+..|+.+++|++|+||||||||++++++|+.++.++..+..
T Consensus 1 ~~~~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~l~~ala~~~~~~~~~i~~--------- 71 (258)
T d1e32a2 1 VGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLING--------- 71 (258)
T ss_dssp CCGGGCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCTTSSHHHHHHHHHHHTTCEEEEECH---------
T ss_pred CChhhhccHHHHHHHHHHHHHHHhcCHHHHHhCCCCCCceeEEecCCCCCchHHHHHHHHHhCCeEEEEEc---------
Confidence 58999999999999999999999999999999999999999999999999999999999999998888765
Q ss_pred HHHHhhhhhhhcccccccccccCCCccchhhhhcchHHHHHHHHHHHHHhcCCeEEEeccccccccccCCCCCCccHHHH
Q psy11254 248 MAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327 (741)
Q Consensus 248 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~~~~~~p~~~lD~~~~ 327 (741)
+.+.+.|.|+....++.+|..|..+.||||||||+|.+++++.+..++...
T Consensus 72 --------------------------~~l~~~~~g~~~~~l~~~f~~A~~~~p~il~iDeid~l~~~r~~~~~~~~~--- 122 (258)
T d1e32a2 72 --------------------------PEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER--- 122 (258)
T ss_dssp --------------------------HHHTTSCTTHHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHH---
T ss_pred --------------------------hhhcccccccHHHHHHHHHHHHHhcCCeEEEehhhhhhccCCCCCCCchHH---
Confidence 556677899999999999999999999999999999999988655444333
Q ss_pred HHHHHHHHhccCCCCCCCeEEEEeeCCCCCCCccccCCCccceeeecCCCCHHHHHhccccchhccCCCcccCCCCHHHH
Q psy11254 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAV 407 (741)
Q Consensus 328 ~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld~al~r~gr~d~~i~~~~p~~~~r~~i~~~l~~~~~~~~~~~~~~~~~l 407 (741)
+.+..++..+++.....++.||+|||+++.+|++++|+||||.+|+++.|+.++|..| +..+........++++..+
T Consensus 123 ~~~~~~~~~~~~~~~~~~vlvi~tTn~~~~ld~al~r~gRfd~~i~~~~P~~~~R~~i---l~~~l~~~~~~~~~~~~~l 199 (258)
T d1e32a2 123 RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI---LQIHTKNMKLADDVDLEQV 199 (258)
T ss_dssp HHHHHHHHHHHTCCCSSCEEEEEEESCGGGSCGGGTSTTSSCEEEECCCCCHHHHHHH---HHHTTTTSCBCTTCCHHHH
T ss_pred HHHHHhccccccccccCCccEEEeCCCccccchhhhhcccccceeECCCCCHHHHHHH---hhhhccCcccccccchhhh
Confidence 3444555555555567889999999999999999999999999999999999999999 7777777777788899999
Q ss_pred HHhcCCCCHHHHHHHHHHHHHHHHhhhc
Q psy11254 408 VKLSDSFNGADLRNVCTEAGLFAIRSER 435 (741)
Q Consensus 408 a~~t~g~~gadi~~l~~~A~~~a~~~~~ 435 (741)
++.|+||+|+||.++|++|...++++..
T Consensus 200 a~~t~G~s~adl~~lv~~A~~~a~~~~~ 227 (258)
T d1e32a2 200 ANETHGHVGADLAALCSEAALQAIRKKM 227 (258)
T ss_dssp HHHCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcccCCCHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999988877644
No 4
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=1.4e-36 Score=310.75 Aligned_cols=223 Identities=37% Similarity=0.577 Sum_probs=189.9
Q ss_pred CCChHHHHhcCCCCCCceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhhccccchHHHHHHHHHHHHHhcCCeEEEE
Q psy11254 510 LLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFM 589 (741)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~~~~~g~s~~~i~~~f~~a~~~~p~Vl~i 589 (741)
+.+++.++++|..+++++||+||||||||++|+++|++++.+++.++++++.++|+|+++.+++.+|+.|+..+||||||
T Consensus 31 ~~~~~~~~~~g~~~~~~iLL~GppGtGKT~la~~iA~~~~~~~~~i~~~~l~~~~~g~~~~~l~~~f~~A~~~~P~il~i 110 (256)
T d1lv7a_ 31 LREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFI 110 (256)
T ss_dssp HHCGGGC-----CCCCEEEEECCTTSCHHHHHHHHHHHHTCCEEEECSCSSTTSCCCCCHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHCHHHHHHcCCCCCCeEEeeCCCCCCccHHHHHHHHHcCCCEEEEEhHHhhhcchhHHHHHHHHHHHHHHHcCCEEEEE
Confidence 45667778889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCCccccCCCCcceEEEcCCCCHHHHHHH
Q psy11254 590 DEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEI 669 (741)
Q Consensus 590 DE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld~al~rpgR~d~~i~~~~p~~~~r~~i 669 (741)
||+|+++..|.+...+.+....++++++|.++|++.+.++++||+|||+|+.+|+|++||||||+.|+|++|+.++|.+|
T Consensus 111 DeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~v~vIatTn~~~~ld~al~R~gRfd~~i~i~~P~~~~R~~i 190 (256)
T d1lv7a_ 111 DEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQI 190 (256)
T ss_dssp TTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCCSSSCEEEEEEESCTTTSCGGGGSTTSSCEEEECCCCCHHHHHHH
T ss_pred EChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCCCCCEEEEEeCCCcccCCHhHcCCCCCCEEEECCCcCHHHHHHH
Confidence 99999999987776666667788999999999999888899999999999999999999999999999999999999999
Q ss_pred HHHhhcCccccCCCCcccccccccccccchHHHHHHHhhhhhhhcCCCcccHHHHHHHHHHHH
Q psy11254 670 LKIHAGPIAKHGEIGDAATKWVLPFTAGGFIYIATVSVIPELLEDTSPKQTVKEILALLLGVF 732 (741)
Q Consensus 670 ~~~~~~~~~~~~~~~~~a~~~l~~~~s~gf~~~a~~~~~~~l~~~~~~~~s~~~i~~~l~g~~ 732 (741)
|+.++.......+++...+.......+++.+.....+++...+.+....++.+++..++.-|+
T Consensus 191 l~~~l~~~~~~~~~~~~~la~~t~G~s~adi~~l~~~A~~~a~~~~~~~i~~~d~~~Al~rv~ 253 (256)
T d1lv7a_ 191 LKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIM 253 (256)
T ss_dssp HHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHHT
T ss_pred HHHhccCCCcCcccCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHcCCCccCHHHHHHHHHHHh
Confidence 999999877665665555554455556666655555555555666677789999998877654
No 5
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=4.2e-37 Score=317.53 Aligned_cols=232 Identities=41% Similarity=0.751 Sum_probs=204.8
Q ss_pred CCCCCcccccChHHHHHHHHHHhhccCCChHHHhhhCCCCCCCceEEcCCCChHHHHHHHHHHhcCCCceeeecccccch
Q psy11254 165 PGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTS 244 (741)
Q Consensus 165 ~~~~~~~~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~GvlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~~~ 244 (741)
+|.++|+||+|++++|++|.+.+.+|+.+++.|.+.|+.+++|++|+||||||||++++++|+.++.++..++.
T Consensus 1 ~p~~~f~di~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~Gp~GtGKT~l~~ala~~~~~~~~~~~~------ 74 (265)
T d1r7ra3 1 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKG------ 74 (265)
T ss_dssp CCCCSCSSCSSSSCCCCHHHHHTHHHHHCHHHHHHCCCCCCCEEEEBCCTTSSHHHHHHHHHHHTTCEEEEECH------
T ss_pred CCCCCHHHhcCHHHHHHHHHHHHHHHhhCHHHHHhCCCCCCCeEEEECCCCCcchhHHHHHHHHhCCcEEEEEH------
Confidence 36899999999999999999999999999999999999999999999999999999999999999999888764
Q ss_pred hhHHHHHhhhhhhhcccccccccccCCCccchhhhhcchHHHHHHHHHHHHHhcCCeEEEeccccccccccCCCCCCccH
Q psy11254 245 KEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADR 324 (741)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~~~~~~p~~~lD~ 324 (741)
+.+.+.+.|+....++.+|..|..++||||||||+|.++.++..+.++...
T Consensus 75 -----------------------------~~l~~~~~~~~~~~l~~~f~~A~~~~p~il~ideid~l~~~~~~~~~~~~~ 125 (265)
T d1r7ra3 75 -----------------------------PELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGG 125 (265)
T ss_dssp -----------------------------HHHHTSCTTTHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHH
T ss_pred -----------------------------HHhhhccccchHHHHHHHHHHHHhcCCcceeHHhhhhccccCCCcCCCCcH
Confidence 556678899999999999999999999999999999999988777777777
Q ss_pred HHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCCccccCCCccceeeecCCCCHHHHHhccccchhccCCCcccCCCCH
Q psy11254 325 EIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDY 404 (741)
Q Consensus 325 ~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld~al~r~gr~d~~i~~~~p~~~~r~~i~~~l~~~~~~~~~~~~~~~ 404 (741)
+..+.+..++..++++....++.||+|||+++.+|++++|+|||+.+|+++.|+..+|.+| ++.+........++++
T Consensus 126 ~~~~~~~~ll~~l~~~~~~~~v~vi~ttn~~~~ld~al~r~gRf~~~i~~~~p~~~~R~~i---l~~~l~~~~~~~~~~l 202 (265)
T d1r7ra3 126 AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAI---LKANLRKSPVAKDVDL 202 (265)
T ss_dssp HHHHHHHHHHHTCC------CCEEEECCBSCTTTSCGGGSSTTSEEEEECCCCCCHHHHHH---HHHHTTCC----CCCC
T ss_pred HHHHHHHHHHHHhhCcCCCCCEEEEEeCCCchhCCHHHhCCCCccEEEEecchHHHHHHHH---HHHHhccCCchhhhhH
Confidence 7777888999999887777889999999999999999999999999999999999999999 6667777666778899
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHhhh
Q psy11254 405 EAVVKLSDSFNGADLRNVCTEAGLFAIRSE 434 (741)
Q Consensus 405 ~~la~~t~g~~gadi~~l~~~A~~~a~~~~ 434 (741)
..++..|+||+++||.++|++|...++++.
T Consensus 203 ~~la~~t~g~s~~di~~lv~~A~~~A~~~~ 232 (265)
T d1r7ra3 203 EFLAKMTNGFSGADLTEICQRACKLAIRES 232 (265)
T ss_dssp HHHHHHHCSSCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998887653
No 6
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=6.8e-36 Score=304.42 Aligned_cols=219 Identities=39% Similarity=0.595 Sum_probs=184.3
Q ss_pred CCChHHHHhcCCCCCCceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhhccccchHHHHHHHHHHHHHhcCCeEEEE
Q psy11254 510 LLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFM 589 (741)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~~~~~g~s~~~i~~~f~~a~~~~p~Vl~i 589 (741)
+.+++.+.++|..+++++||+||||||||++|+++|++++.+++.++++++.++|+|+++++++.+|+.|+..+||||||
T Consensus 28 l~~~~~~~~~g~~~~~giLl~GppGtGKT~la~aia~~~~~~~~~i~~~~l~~~~~g~~~~~l~~~f~~a~~~~p~Ii~i 107 (247)
T d1ixza_ 28 LKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLFETAKRHAPCIVFI 107 (247)
T ss_dssp HHCHHHHHHTTCCCCSEEEEECCTTSSHHHHHHHHHHHTTCCEEEEEHHHHHHSCTTHHHHHHHHHHHHHTTSSSEEEEE
T ss_pred HHCHHHHHHcCCCCCceEEEecCCCCChhHHHHHHHHHcCCCEEEEEhHHhhhccccHHHHHHHHHHHHHHHcCCEEEEE
Confidence 45778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCCccccCCCCcceEEEcCCCCHHHHHHH
Q psy11254 590 DEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEI 669 (741)
Q Consensus 590 DE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld~al~rpgR~d~~i~~~~p~~~~r~~i 669 (741)
||+|.+++.|.....+.+....++++++|.+|+++....+|+||+|||+|+.+|++++||||||..|+|++|+.++|.+|
T Consensus 108 Deid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~vivi~tTn~~~~ld~al~R~~Rf~~~i~~~~P~~~eR~~i 187 (247)
T d1ixza_ 108 DEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEKDTAIVVMAATNRPDILDPALLRPGRFDRQIAIDAPDVKGREQI 187 (247)
T ss_dssp ETHHHHHC---------CHHHHHHHHHHHHHHHTCCTTCCEEEEEEESCGGGSCGGGGSTTSSCEEEECCSCCHHHHHHH
T ss_pred EChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCCCCCEEEEEeCCCccccCHhHcCCCCCcEEEEECCcCHHHHHHH
Confidence 99999999987766666677788999999999999888899999999999999999999999999999999999999999
Q ss_pred HHHhhcCccccCCCCcccccccccccccchHHHHHHHhhhhhhhcCCCcccHHHHHHHH
Q psy11254 670 LKIHAGPIAKHGEIGDAATKWVLPFTAGGFIYIATVSVIPELLEDTSPKQTVKEILALL 728 (741)
Q Consensus 670 ~~~~~~~~~~~~~~~~~a~~~l~~~~s~gf~~~a~~~~~~~l~~~~~~~~s~~~i~~~l 728 (741)
|+.++.......++....+.......+++.+......++...+.+....++.+++..++
T Consensus 188 l~~~l~~~~~~~~~~~~~la~~t~g~s~~di~~lv~~A~l~a~~~~~~~i~~~d~~~A~ 246 (247)
T d1ixza_ 188 LRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAA 246 (247)
T ss_dssp HHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHT
T ss_pred HHHHhcccCCccccCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHhh
Confidence 99999876655555544444444455556665555555555556667789999988764
No 7
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=1.3e-33 Score=290.38 Aligned_cols=206 Identities=39% Similarity=0.639 Sum_probs=176.9
Q ss_pred ccceeccCCChHHHHhcCCCCCCceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhhccccchHHHHHHHHHHHHHhc
Q psy11254 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNH 582 (741)
Q Consensus 503 ~~~i~~~~~~~~~~~~~~~~~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~~~~~g~s~~~i~~~f~~a~~~ 582 (741)
.+.+.+|+.+++.++++|+++++++||+||||||||++++++|++++.+++.++++++.+.|+|+++.+++.+|+.|+..
T Consensus 17 ~~~i~~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~l~~ala~~~~~~~~~i~~~~l~~~~~g~~~~~l~~~f~~A~~~ 96 (258)
T d1e32a2 17 KEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 96 (258)
T ss_dssp HHHHHHHHHCHHHHHHCCCCCCCEEEEECCTTSSHHHHHHHHHHHTTCEEEEECHHHHTTSCTTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCHHHHHhCCCCCCceeEEecCCCCCchHHHHHHHHHhCCeEEEEEchhhcccccccHHHHHHHHHHHHHhc
Confidence 34456788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCCccccCCCCcceEEEcCCCC
Q psy11254 583 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPN 662 (741)
Q Consensus 583 ~p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld~al~rpgR~d~~i~~~~p~ 662 (741)
.||||||||+|.++++|.+..++. ..+++..++..+++.....+++||+|||+|+.+|+|++||||||+.|+|++|+
T Consensus 97 ~p~il~iDeid~l~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~~~vlvi~tTn~~~~ld~al~r~gRfd~~i~~~~P~ 173 (258)
T d1e32a2 97 APAIIFIDELDAIAPKREKTHGEV---ERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPD 173 (258)
T ss_dssp CSEEEEESSGGGTCCHHHHCCCTT---HHHHHHHHHHHHHTCCCSSCEEEEEEESCGGGSCGGGTSTTSSCEEEECCCCC
T ss_pred CCeEEEehhhhhhccCCCCCCCch---HHHHHHHhccccccccccCCccEEEeCCCccccchhhhhcccccceeECCCCC
Confidence 999999999999999886544332 35678888888888888889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCccccCCCCcccccccccccccchHHHHHHHhhhhh
Q psy11254 663 EQARLEILKIHAGPIAKHGEIGDAATKWVLPFTAGGFIYIATVSVIPEL 711 (741)
Q Consensus 663 ~~~r~~i~~~~~~~~~~~~~~~~~a~~~l~~~~s~gf~~~a~~~~~~~l 711 (741)
.++|.+||+.+++......+++...+.......+++.+...+..++...
T Consensus 174 ~~~R~~il~~~l~~~~~~~~~~~~~la~~t~G~s~adl~~lv~~A~~~a 222 (258)
T d1e32a2 174 ATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQA 222 (258)
T ss_dssp HHHHHHHHHHTTTTSCBCTTCCHHHHHHHCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhccCcccccccchhhhhhcccCCCHHHHHHHHHHHHHHH
Confidence 9999999999998776655555444444455556666655554444333
No 8
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.98 E-value=1.1e-32 Score=284.33 Aligned_cols=205 Identities=37% Similarity=0.643 Sum_probs=172.1
Q ss_pred ccceeccCCChHHHHhcCCCCCCceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhhccccchHHHHHHHHHHHHHhc
Q psy11254 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNH 582 (741)
Q Consensus 503 ~~~i~~~~~~~~~~~~~~~~~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~~~~~g~s~~~i~~~f~~a~~~ 582 (741)
.+.+.+|+.+++.+.+.|+.+++++||+||||||||++++++|++++.+++.++++++.+.|.|+++.+++.+|..|+..
T Consensus 20 ~~~i~~~l~~~~~~~~~g~~~~~giLL~Gp~GtGKT~l~~ala~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~f~~A~~~ 99 (265)
T d1r7ra3 20 QELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQA 99 (265)
T ss_dssp HHHTHHHHHCHHHHHHCCCCCCCEEEEBCCTTSSHHHHHHHHHHHTTCEEEEECHHHHHTSCTTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhCHHHHHhCCCCCCCeEEEECCCCCcchhHHHHHHHHhCCcEEEEEHHHhhhccccchHHHHHHHHHHHHhc
Confidence 34456677889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCCccccCCCCcceEEEcCCCC
Q psy11254 583 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPN 662 (741)
Q Consensus 583 ~p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld~al~rpgR~d~~i~~~~p~ 662 (741)
+||||||||+|.++..|....++...+..++++.+|++|+++....+++||+|||+++.+|+|++||||||..|+|++|+
T Consensus 100 ~p~il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~v~vi~ttn~~~~ld~al~r~gRf~~~i~~~~p~ 179 (265)
T d1r7ra3 100 APCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 179 (265)
T ss_dssp CSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC------CCEEEECCBSCTTTSCGGGSSTTSEEEEECCCCC
T ss_pred CCcceeHHhhhhccccCCCcCCCCcHHHHHHHHHHHHHhhCcCCCCCEEEEEeCCCchhCCHHHhCCCCccEEEEecchH
Confidence 99999999999999988766666666777899999999999988888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCccccCCCCcccccccccccccchHHHHHHHh
Q psy11254 663 EQARLEILKIHAGPIAKHGEIGDAATKWVLPFTAGGFIYIATVSV 707 (741)
Q Consensus 663 ~~~r~~i~~~~~~~~~~~~~~~~~a~~~l~~~~s~gf~~~a~~~~ 707 (741)
.++|.+||+.+++......+++...+.......+++.+......+
T Consensus 180 ~~~R~~il~~~l~~~~~~~~~~l~~la~~t~g~s~~di~~lv~~A 224 (265)
T d1r7ra3 180 EKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRA 224 (265)
T ss_dssp CHHHHHHHHHHTTCC----CCCCHHHHHHHCSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCchhhhhHHHHHhcCCCCCHHHHHHHHHHH
Confidence 999999999999876655555555555555555666665444444
No 9
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=99.93 E-value=1.9e-29 Score=262.55 Aligned_cols=168 Identities=17% Similarity=0.209 Sum_probs=137.4
Q ss_pred eccCCChHHHHhcCCCCCCceEE-EcCCCCChHHHHHHHHHHhC--ccEEEEechhhhccccchHHHHHHHHHHHHHhcC
Q psy11254 507 ELPLLNPELFQRVGITPPKGCLL-YGPPGTGKTLLARAVASQLD--ANFLKVVSSAIVDKYIGESARLIREMFNYARNHQ 583 (741)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~ll-~G~~G~GKt~l~~~~a~~~~--~~~~~v~~~~l~~~~~g~s~~~i~~~f~~a~~~~ 583 (741)
.++...|.+++.++...+++++| +||||||||.+|+++|++++ .+|+.+++++++++|+|+++++++.+|+.|+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~g~~l~~G~pG~GKT~la~ala~~~~~~~~~~~~~~~~~~~~~~G~~e~~~~~~f~~a~~-- 182 (321)
T d1w44a_ 105 ELVGCSPVVAEFGGHRYASGMVIVTGKGNSGKTPLVHALGEALGGKDKYATVRFGEPLSGYNTDFNVFVDDIARAMLQ-- 182 (321)
T ss_dssp TCCSBCCEEEEETTEEEESEEEEEECSSSSCHHHHHHHHHHHHHTTSCCEEEEBSCSSTTCBCCHHHHHHHHHHHHHH--
T ss_pred cccccchHHHHHhhcccCCceEEEECCCCccHHHHHHHHHHHhcCCCCeEEEEhhHhhhcccchHHHHHHHHHHHHhh--
Confidence 34445667777778777788665 89999999999999999986 67999999999999999999999999999985
Q ss_pred CeEEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCC---CCCCccccCCCCcceEEEcCC
Q psy11254 584 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRP---DTLDPALLRPGRLDRKIEIPL 660 (741)
Q Consensus 584 p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~---~~ld~al~rpgR~d~~i~~~~ 660 (741)
||||||||+|++.+.|..++.+. ...++++++|.+|||+....+|+||+|||+. +.+|++++||||||+.++++.
T Consensus 183 ~~ilf~DEid~~~~~r~~~~~~~--~~~r~v~~lL~e~dg~~~~~~v~viaatN~~~~~~~i~~~~~r~~Rf~~~v~v~~ 260 (321)
T d1w44a_ 183 HRVIVIDSLKNVIGAAGGNTTSG--GISRGAFDLLSDIGAMAASRGCVVIASLNPTSNDDKIVELVKEASRSNSTSLVIS 260 (321)
T ss_dssp CSEEEEECCTTTC-------------CCHHHHHHHHHHHHHHHHHTCEEEEECCCCCCCHHHHHHHHHHHHHSCSEEEEE
T ss_pred ccEEEeehhhhhccccccCCCCC--cchhhhhhhhhhccccccCCCeEEEEeCCCcccccchhhhhhccCcccceeecCC
Confidence 79999999999999996544332 2347999999999999888899999999952 234566689999999999999
Q ss_pred CCHHHHHHHHHHhhcCcc
Q psy11254 661 PNEQARLEILKIHAGPIA 678 (741)
Q Consensus 661 p~~~~r~~i~~~~~~~~~ 678 (741)
|+.+.|.+|++.+...+.
T Consensus 261 pd~~~r~~il~~~~~~~~ 278 (321)
T d1w44a_ 261 TDVDGEWQVLTRTGEGLQ 278 (321)
T ss_dssp CSSTTEEEEEEECBTTCC
T ss_pred CChHHHHHHHHHhccCcc
Confidence 999999999998877654
No 10
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=99.88 E-value=4.1e-23 Score=209.45 Aligned_cols=144 Identities=23% Similarity=0.305 Sum_probs=117.5
Q ss_pred CCCCCceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhhccccchHH-HHHHHHHHHHHhcCCeEEEEcccccccCCC
Q psy11254 521 ITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESA-RLIREMFNYARNHQPCIIFMDEIDAIGGRR 599 (741)
Q Consensus 521 ~~~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~~~~~g~s~-~~i~~~f~~a~~~~p~Vl~iDE~d~~~~~r 599 (741)
..+++++||+||||||||++|+++|++++.+++.+++++...++.+.+. ..++.+|+.|+..+||||||||+|.++..+
T Consensus 37 ~~p~~~vLL~GppGtGKT~la~alA~~~~~~~~~i~~~~~~~g~~~~~~~~~i~~if~~A~~~~p~il~iDEid~l~~~~ 116 (246)
T d1d2na_ 37 RTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYV 116 (246)
T ss_dssp SCSEEEEEEECSTTSSHHHHHHHHHHHHTCSEEEEECGGGCTTCCHHHHHHHHHHHHHHHHTSSEEEEEECCHHHHTTCB
T ss_pred CCCCeEEEEECcCCCCHHHHHHHHhhcccccccccccccccccccccchhhhhhhhhhhhhhcccceeehhhhhhHhhhc
Confidence 3566889999999999999999999999999999999988777777664 679999999999999999999999998876
Q ss_pred CCCCCcccHHHHHHHHHHHHHccCCCCCC-CeEEEEeeCCCCCCCccccCCCCcceEEEcCCCCHHHHHHHHH
Q psy11254 600 FSEGTSADREIQRTLMELLNQMDGFDSLG-QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671 (741)
Q Consensus 600 ~~~~~~~~~~~~~~l~~lL~~~~g~~~~~-~v~vi~tTn~~~~ld~al~rpgR~d~~i~~~~p~~~~r~~i~~ 671 (741)
...... ..+++.+++..+++....+ +|+||+|||+++.+|++.++ +||+..|+||.+. +|.+|++
T Consensus 117 ~~~~~~----~~~~~~~ll~~l~~~~~~~~~v~vi~tTn~~~~ld~~~~~-~rF~~~i~~P~~~--~r~~il~ 182 (246)
T d1d2na_ 117 PIGPRF----SNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEML-NAFSTTIHVPNIA--TGEQLLE 182 (246)
T ss_dssp TTTTBC----CHHHHHHHHHHTTCCCSTTCEEEEEEEESCHHHHHHTTCT-TTSSEEEECCCEE--EHHHHHH
T ss_pred ccccch----hHHHHHHHHHHhcCCCccccceeeeeccCChhhccchhhc-CccceEEecCCch--hHHHHHH
Confidence 433221 2367788889998875543 58899999999999977554 6999999996654 3334444
No 11
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=99.86 E-value=3e-24 Score=223.08 Aligned_cols=165 Identities=16% Similarity=0.186 Sum_probs=129.3
Q ss_pred ccCCChHHHhhhCCCCCCCce-EEcCCCChHHHHHHHHHHhcC--CCceeeecccccchhhHHHHHhhhhhhhccccccc
Q psy11254 189 LPLLNPELFQRVGITPPKGCL-LYGPPGTGKTLLARAVASQLD--ANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLE 265 (741)
Q Consensus 189 ~~~~~~~~~~~~~l~~~~Gvl-L~Gp~GtGKTtL~r~ia~~l~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 265 (741)
++...+.+++.++...++|++ |+||||||||.|+++||++++ .+|..+.+
T Consensus 106 ~~~~~~~~~~~~~~~~~~g~~l~~G~pG~GKT~la~ala~~~~~~~~~~~~~~--------------------------- 158 (321)
T d1w44a_ 106 LVGCSPVVAEFGGHRYASGMVIVTGKGNSGKTPLVHALGEALGGKDKYATVRF--------------------------- 158 (321)
T ss_dssp CCSBCCEEEEETTEEEESEEEEEECSSSSCHHHHHHHHHHHHHTTSCCEEEEB---------------------------
T ss_pred ccccchHHHHHhhcccCCceEEEECCCCccHHHHHHHHHHHhcCCCCeEEEEh---------------------------
Confidence 344567788888888999965 589999999999999999986 45666665
Q ss_pred ccccCCCccchhhhhcchHHHHHHHHHHHHHhcCCeEEEeccccccccccCCCCCCccHHHHHHHHHHHHhccCCCCCCC
Q psy11254 266 KTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQ 345 (741)
Q Consensus 266 ~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~~~~~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~ 345 (741)
++++++|.|+.+++++.+|..|.. ||||||||||+++++|.+...+ ....+.+.++|.+|+++....+
T Consensus 159 --------~~~~~~~~G~~e~~~~~~f~~a~~--~~ilf~DEid~~~~~r~~~~~~--~~~~r~v~~lL~e~dg~~~~~~ 226 (321)
T d1w44a_ 159 --------GEPLSGYNTDFNVFVDDIARAMLQ--HRVIVIDSLKNVIGAAGGNTTS--GGISRGAFDLLSDIGAMAASRG 226 (321)
T ss_dssp --------SCSSTTCBCCHHHHHHHHHHHHHH--CSEEEEECCTTTC-------------CCHHHHHHHHHHHHHHHHHT
T ss_pred --------hHhhhcccchHHHHHHHHHHHHhh--ccEEEeehhhhhccccccCCCC--CcchhhhhhhhhhccccccCCC
Confidence 677789999999999999999974 8999999999999988543322 2234688899999998877788
Q ss_pred eEEEEeeCCCCCC----CccccCCCccceeeecCCCCHHHHHhccccchhccCCC
Q psy11254 346 VKMIMATNRPDTL----DPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPI 396 (741)
Q Consensus 346 v~vI~at~~~~~l----d~al~r~gr~d~~i~~~~p~~~~r~~i~~~l~~~~~~~ 396 (741)
+.||+||| ++.+ ++++.|+||||+.+.++.|+..+|.+| +..+...+
T Consensus 227 v~viaatN-~~~~~~~i~~~~~r~~Rf~~~v~v~~pd~~~r~~i---l~~~~~~~ 277 (321)
T d1w44a_ 227 CVVIASLN-PTSNDDKIVELVKEASRSNSTSLVISTDVDGEWQV---LTRTGEGL 277 (321)
T ss_dssp CEEEEECC-CCCCCHHHHHHHHHHHHHSCSEEEEECSSTTEEEE---EEECBTTC
T ss_pred eEEEEeCC-CcccccchhhhhhccCcccceeecCCCChHHHHHH---HHHhccCc
Confidence 99999999 4544 456679999999999999999999888 66665544
No 12
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=99.83 E-value=1.4e-22 Score=202.19 Aligned_cols=163 Identities=16% Similarity=0.154 Sum_probs=132.8
Q ss_pred hhccCCChHHHhhhCCCCCCC--ceEEcCCCChHHHHHHHHHHhcCCCceeeecccc-----------------------
Q psy11254 187 IELPLLNPELFQRVGITPPKG--CLLYGPPGTGKTLLARAVASQLDANFLKVVSSLF----------------------- 241 (741)
Q Consensus 187 i~~~~~~~~~~~~~~l~~~~G--vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~----------------------- 241 (741)
+...|+...++++++|++++| +.|+||||||||||+|+|+|.+.|+.|++.....
T Consensus 9 l~k~yg~~~al~~vsl~i~~Ge~~~liG~sGaGKSTll~~i~gl~~p~sG~I~~~g~~i~~~~~~~~~~~~~r~ig~v~Q 88 (240)
T d1g2912 9 VWKVFGEVTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIFVPPKDRDIAMVFQ 88 (240)
T ss_dssp EEEEETTEEEEEEEEEEEETTCEEEEECSTTSSHHHHHHHHHTSSCCSEEEEEETTEEEEEGGGTEECCGGGSSEEEECS
T ss_pred EEEEECCEEEEcceeeEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCCEEEECCEEecccchhhhcccccccceeccc
Confidence 445567778899999999999 7899999999999999999999998777753210
Q ss_pred -------cchhhHHHHHh------hhhhhhcccccccccccCCCccchhhhhcchHHHHHHHHHHHHHhcCCeEEEeccc
Q psy11254 242 -------VTSKEDMAILM------GNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEI 308 (741)
Q Consensus 242 -------~~~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllDEi 308 (741)
.+..+++.+.. ..+..+++..+++.+++.......+.++|||++|++ ++++|+..+|.|||+||
T Consensus 89 ~~~L~~~ltV~eni~~~~~~~~~~~~e~~~~v~~~l~~~~l~~~~~~~p~~LSGGqkQRv--~IAraL~~~P~iLllDE- 165 (240)
T d1g2912 89 SYALYPHMTVYDNIAFPLKLRKVPRQEIDQRVREVAELLGLTELLNRKPRELSGGQRQRV--ALGRAIVRKPQVFLMDE- 165 (240)
T ss_dssp CCCCCTTSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTCGGGTTCCGGGSCHHHHHHH--HHHHHHHTCCSEEEEEC-
T ss_pred chhhcchhhhhHhhhhhHHHcCCCHHHHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHH--HHHHHHhcCCCEEEecC-
Confidence 12223333321 234566788899999998888899999999999999 99999999999999999
Q ss_pred cccccccCCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCCccccC
Q psy11254 309 DAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLR 364 (741)
Q Consensus 309 d~l~~~~~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld~al~r 364 (741)
|++++|+..+..+.+++..+.. ..+++||++||+++++...+.|
T Consensus 166 ---------Pt~~LD~~~~~~i~~~l~~l~~---~~g~tvi~vTHd~~~~~~~~dr 209 (240)
T d1g2912 166 ---------PLSNLDAKLRVRMRAELKKLQR---QLGVTTIYVTHDQVEAMTMGDR 209 (240)
T ss_dssp ---------TTTTSCHHHHHHHHHHHHHHHH---HHTCEEEEEESCHHHHHHHCSE
T ss_pred ---------CCcccCHHHHHHHHHHHHHHHh---ccCCEEEEEcCCHHHHHHhCCE
Confidence 9999999999999999988854 2478999999999876544443
No 13
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.83 E-value=7e-23 Score=203.23 Aligned_cols=160 Identities=13% Similarity=0.151 Sum_probs=108.6
Q ss_pred hhccCCChHHHhhhCCCCCCC--ceEEcCCCChHHHHHHHHHHhcCCCceeeecccc-----------------------
Q psy11254 187 IELPLLNPELFQRVGITPPKG--CLLYGPPGTGKTLLARAVASQLDANFLKVVSSLF----------------------- 241 (741)
Q Consensus 187 i~~~~~~~~~~~~~~l~~~~G--vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~----------------------- 241 (741)
+...|+...++++++|++++| ++|+||||||||||+|+|+|.+.++.+++.....
T Consensus 6 v~k~yg~~~~l~~isl~i~~Gei~~liGpsGsGKSTLl~~i~Gl~~p~sG~I~i~g~~i~~~~~~~r~ig~v~Q~~~l~~ 85 (232)
T d2awna2 6 VTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMVFQSYALYP 85 (232)
T ss_dssp EEEEETTEEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEESSSCCTTSCGGGTCEEEECSSCCC--
T ss_pred EEEEECCEEEEeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCCEEEECCEECCCCchhhceeeeecccccccc
Confidence 445567778899999999999 7899999999999999999999999888854311
Q ss_pred -cchhhHHHH------HhhhhhhhcccccccccccCCCccchhhhhcchHHHHHHHHHHHHHhcCCeEEEeccccccccc
Q psy11254 242 -VTSKEDMAI------LMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGR 314 (741)
Q Consensus 242 -~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~~~ 314 (741)
.+..+++.+ ....+..+++..+++.+++.......+.++|||++|++ ++++|+.++|.||++||
T Consensus 86 ~~tv~eni~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSGGqkQRv--aiAraL~~~P~illlDE------- 156 (232)
T d2awna2 86 HLSVAENMSFGLKLAGAKKEVINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRV--AIGRTLVAEPSVFLLDE------- 156 (232)
T ss_dssp -------------------CHHHHHHHHHHHHC-----------------------CHHHHHHTCCSEEEEES-------
T ss_pred chhHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCChhhhhCChhhCCHHHHHHH--HHHHHHhcCCCEEEEcC-------
Confidence 111112221 12234566788889999998888999999999999999 99999999999999999
Q ss_pred cCCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCCcc
Q psy11254 315 RFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPA 361 (741)
Q Consensus 315 ~~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld~a 361 (741)
|++++|+..+..+.+++..+.. ..+.++|++||+++++...
T Consensus 157 ---Pts~LD~~~~~~i~~~l~~l~~---~~g~tii~vTHd~~~a~~~ 197 (232)
T d2awna2 157 ---PLSNLDAALRVQMRIEISRLHK---RLGRTMIYVTHDQVEAMTL 197 (232)
T ss_dssp ---TTTTSCHHHHHHHHHHHHHHHH---HSCCEEEEEESCHHHHHHH
T ss_pred ---CCCCCCHHHHHHHHHHHHHHHH---hcCCEEEEEeCCHHHHHHh
Confidence 9999999999999999988753 3578999999999866543
No 14
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=99.83 E-value=1.6e-22 Score=201.39 Aligned_cols=161 Identities=17% Similarity=0.165 Sum_probs=131.3
Q ss_pred hhccCCChHHHhhhCCCCCCC--ceEEcCCCChHHHHHHHHHHhcCCCceeeecccc-----------------------
Q psy11254 187 IELPLLNPELFQRVGITPPKG--CLLYGPPGTGKTLLARAVASQLDANFLKVVSSLF----------------------- 241 (741)
Q Consensus 187 i~~~~~~~~~~~~~~l~~~~G--vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~----------------------- 241 (741)
+...|++..++++++|++++| +.|+||||||||||+|+|+|.+.|+.|++.....
T Consensus 12 lsk~yg~~~al~~vsl~v~~Ge~~~liGpsGaGKSTLl~~i~Gl~~p~sG~I~i~g~~i~~~~~~~r~ig~v~Q~~~l~~ 91 (239)
T d1v43a3 12 LTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPKDRNISMVFQSYAVWP 91 (239)
T ss_dssp EEEEETTEEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCGGGGTEEEEEC------
T ss_pred EEEEECCEEEEcceeEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCEEEEcceecccCCcccceEEEEeechhhcc
Confidence 345567778899999999999 7899999999999999999999999888864321
Q ss_pred -cchhhHHHHH------hhhhhhhcccccccccccCCCccchhhhhcchHHHHHHHHHHHHHhcCCeEEEeccccccccc
Q psy11254 242 -VTSKEDMAIL------MGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGR 314 (741)
Q Consensus 242 -~~~~~~~~~~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~~~ 314 (741)
.+..+++.+. ...+..+++..+++.+++....+..+.++|||++|++ ++++|+..+|+||++||
T Consensus 92 ~ltv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSGGq~QRv--aiAraL~~~P~iLllDE------- 162 (239)
T d1v43a3 92 HMTVYENIAFPLKIKKFPKDEIDKRVRWAAELLQIEELLNRYPAQLSGGQRQRV--AVARAIVVEPDVLLMDE------- 162 (239)
T ss_dssp CCCHHHHHHTTCC--CCCHHHHHHHHHHHHHHTTCGGGTTSCTTTCCSSCHHHH--HHHHHHTTCCSEEEEES-------
T ss_pred cchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhcCChhhCCHHHHHHH--HHHhhhccCCCceeecC-------
Confidence 1112222221 1224556777888899998888999999999999999 99999999999999999
Q ss_pred cCCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCCccc
Q psy11254 315 RFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPAL 362 (741)
Q Consensus 315 ~~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld~al 362 (741)
|++++|+..+..+.+++.++.. ..++++|++||++++....+
T Consensus 163 ---Pts~LD~~~~~~i~~ll~~l~~---~~g~tii~vTHd~~~a~~~~ 204 (239)
T d1v43a3 163 ---PLSNLDAKLRVAMRAEIKKLQQ---KLKVTTIYVTHDQVEAMTMG 204 (239)
T ss_dssp ---TTTTSCHHHHHHHHHHHHHHHH---HHTCEEEEEESCHHHHHHHC
T ss_pred ---CcccCCHHHHHHHHHHHHHHHH---hcCCeEEEEeCCHHHHHHhC
Confidence 9999999999999999999854 24789999999998765433
No 15
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.83 E-value=7.6e-21 Score=199.44 Aligned_cols=150 Identities=30% Similarity=0.420 Sum_probs=121.5
Q ss_pred CCCceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhh--ccccchHHHHHHHHHHHHHhc-----CCeEEEEcccccc
Q psy11254 523 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIV--DKYIGESARLIREMFNYARNH-----QPCIIFMDEIDAI 595 (741)
Q Consensus 523 ~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~--~~~~g~s~~~i~~~f~~a~~~-----~p~Vl~iDE~d~~ 595 (741)
++.++||+||||||||++|+++|+.++.+++.++++++. +.|.|+++..++.+|..|+.. .|||+||||+|++
T Consensus 48 ~~~~iLl~GPpG~GKT~lAkalA~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~f~~a~~~~~~~~~~~IIf~DEIdki 127 (309)
T d1ofha_ 48 TPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKI 127 (309)
T ss_dssp CCCCEEEECCTTSSHHHHHHHHHHHHTCCEEEEEGGGGSSCCSGGGSTTHHHHHHHHTTTTCHHHHHHHCEEEEECGGGG
T ss_pred CCceEEEECCCCCCHHHHHHHHhhccccchhcccccccccceeEeeeccccccccchhhhcccccccCCceEEehhhhhh
Confidence 568999999999999999999999999999999999997 458899999999999998763 5899999999999
Q ss_pred cCCCCCCCCcccHHHHHHHHHHHHHccCCCC--------CCCeEEEEe----eCCCCCCCccccCCCCcceEEEcCCCCH
Q psy11254 596 GGRRFSEGTSADREIQRTLMELLNQMDGFDS--------LGQVKMIMA----TNRPDTLDPALLRPGRLDRKIEIPLPNE 663 (741)
Q Consensus 596 ~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~--------~~~v~vi~t----Tn~~~~ld~al~rpgR~d~~i~~~~p~~ 663 (741)
.+++..... +..-..++++||..|||... ..++++|++ +|+++.++|++. ||||.++.|++|+.
T Consensus 128 ~~~~~~~~~--~~~~~gv~~~LL~~~dg~~~~~~~~~i~~s~ilfi~~ga~~~~~~~~~~p~l~--~R~~~~i~~~~~~~ 203 (309)
T d1ofha_ 128 CKKGEYSGA--DVSREGVQRDLLPLVEGSTVSTKHGMVKTDHILFIASGAFQVARPSDLIPELQ--GRLPIRVELTALSA 203 (309)
T ss_dssp SCCSSCCSS--HHHHHHHHHHHHHHHHCCEEEETTEEEECTTCEEEEEECCSSSCGGGSCHHHH--HTCCEEEECCCCCH
T ss_pred hhhccCccc--chhhhHHHHHhhHHhcCCEEecCCeEEEccceeEEeccchhhcCcccchhhhh--hhhheeeeccCCCH
Confidence 887754432 22223477889999998431 234555554 466777777776 59999999999999
Q ss_pred HHHHHHHHHhhcC
Q psy11254 664 QARLEILKIHAGP 676 (741)
Q Consensus 664 ~~r~~i~~~~~~~ 676 (741)
.++.+|++.+...
T Consensus 204 ~~~~~Il~~~~~~ 216 (309)
T d1ofha_ 204 ADFERILTEPHAS 216 (309)
T ss_dssp HHHHHHHHSSTTC
T ss_pred HHHHHHHHHHHHH
Confidence 9999999876543
No 16
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=99.82 E-value=1e-21 Score=194.10 Aligned_cols=158 Identities=15% Similarity=0.174 Sum_probs=127.8
Q ss_pred hhccCCChHHHhhhCCCCCCC--ceEEcCCCChHHHHHHHHHHhcCCCceeeecccc-----------------------
Q psy11254 187 IELPLLNPELFQRVGITPPKG--CLLYGPPGTGKTLLARAVASQLDANFLKVVSSLF----------------------- 241 (741)
Q Consensus 187 i~~~~~~~~~~~~~~l~~~~G--vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~----------------------- 241 (741)
+++.|++. .+++++|++++| ++|+||||||||||+|+|+|.+.++.|++.....
T Consensus 7 lsk~y~~~-aL~~vs~~i~~Ge~~~liGpsGaGKSTll~~l~Gl~~p~sG~I~~~G~~i~~~~~~~r~ig~v~Q~~~l~~ 85 (229)
T d3d31a2 7 LSRKWKNF-SLDNLSLKVESGEYFVILGPTGAGKTLFLELIAGFHVPDSGRILLDGKDVTDLSPEKHDIAFVYQNYSLFP 85 (229)
T ss_dssp EEEECSSC-EEEEEEEEECTTCEEEEECCCTHHHHHHHHHHHTSSCCSEEEEEETTEECTTSCHHHHTCEEECTTCCCCT
T ss_pred EEEEeCCE-EEeeeEEEECCCCEEEEECCCCCcHHHHHHHHhcCcCCCCCEEEEccEeccccchhHhcceeeccccccCc
Confidence 34455553 679999999999 7899999999999999999999999888864311
Q ss_pred -cchhhHHHHHh---hhhhhhcccccccccccCCCccchhhhhcchHHHHHHHHHHHHHhcCCeEEEeccccccccccCC
Q psy11254 242 -VTSKEDMAILM---GNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 317 (741)
Q Consensus 242 -~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~~~~~~ 317 (741)
.+..+++.+.. +....+++..+++.+++.......+.++|||++|++ ++++|+..+|.|||+||
T Consensus 86 ~~tV~enl~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSGG~~QRv--aiAraL~~~P~iLllDE---------- 153 (229)
T d3d31a2 86 HMNVKKNLEFGMRMKKIKDPKRVLDTARDLKIEHLLDRNPLTLSGGEQQRV--ALARALVTNPKILLLDE---------- 153 (229)
T ss_dssp TSCHHHHHHHHHHHHCCCCHHHHHHHHHHTTCTTTTTSCGGGSCHHHHHHH--HHHHHTTSCCSEEEEES----------
T ss_pred cccHHHHHHHHHhhccccHHHHHHHHHHHhcchhhHhCChhhCCHHHhcch--hhhhhhhccCCceeecC----------
Confidence 12233443322 222345677778888888888899999999999999 99999999999999999
Q ss_pred CCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCCc
Q psy11254 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDP 360 (741)
Q Consensus 318 p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld~ 360 (741)
|++++|+..+..+.+++..+.. ..++++|++||+++++..
T Consensus 154 Pts~LD~~~~~~i~~~l~~l~~---~~g~tii~vtHd~~~~~~ 193 (229)
T d3d31a2 154 PLSALDPRTQENAREMLSVLHK---KNKLTVLHITHDQTEARI 193 (229)
T ss_dssp SSTTSCHHHHHHHHHHHHHHHH---HTTCEEEEEESCHHHHHH
T ss_pred CCcCCCHHHHHHHHHHHHHHHh---cCCcEEEEEcCCHHHHHH
Confidence 9999999999999999998854 357899999999986654
No 17
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.81 E-value=4.9e-22 Score=197.89 Aligned_cols=157 Identities=15% Similarity=0.204 Sum_probs=128.0
Q ss_pred CChHHHhhhCCCCCCC--ceEEcCCCChHHHHHHHHHHhcCCCceeeecccc----------------------------
Q psy11254 192 LNPELFQRVGITPPKG--CLLYGPPGTGKTLLARAVASQLDANFLKVVSSLF---------------------------- 241 (741)
Q Consensus 192 ~~~~~~~~~~l~~~~G--vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~---------------------------- 241 (741)
+...++++++|++++| ++|+||||||||||+|+|+|...|+.|++.....
T Consensus 16 g~~~aL~~vsl~i~~Ge~~~iiG~sGsGKSTll~~i~gl~~p~~G~I~~~g~~i~~~~~~~~~~~rr~ig~vfQ~~~L~p 95 (242)
T d1oxxk2 16 GKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYP 95 (242)
T ss_dssp GTEEEEEEEEEEECTTCEEEEECSCHHHHHHHHHHHHTSSCCSEEEEEETTEEEEETTEESSCGGGSCEEEEETTSCCCT
T ss_pred CCEEEEeceEEEECCCCEEEEECCCCCcHHHHHHHHHcCcCCCCceEEECCEEeecCchhhcchhhccceEEeccccccc
Confidence 4456789999999999 7899999999999999999999998887754211
Q ss_pred -cchhhHHHHHh------hhhhhhcccccccccccCCCccchhhhhcchHHHHHHHHHHHHHhcCCeEEEeccccccccc
Q psy11254 242 -VTSKEDMAILM------GNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGR 314 (741)
Q Consensus 242 -~~~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~~~ 314 (741)
.+..+++.+.. ..+.++++.++++.+++.......+.++|||++|++ ++++|+.++|.|||+||
T Consensus 96 ~ltv~eni~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~p~~LSGGqkQRv--aiARaL~~~P~llllDE------- 166 (242)
T d1oxxk2 96 NLTAFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGAQQQRV--ALARALVKDPSLLLLDE------- 166 (242)
T ss_dssp TSCHHHHHHGGGTTSSCCHHHHHHHHHHHHHHTTCGGGTTSCGGGSCHHHHHHH--HHHHHHTTCCSEEEEES-------
T ss_pred cccHHHHhhhhhHhhcCCHHHHHHHHHHHHhhcChHhhhhCChhhCCHHHHhHH--HHHhHHhhcccceeecC-------
Confidence 12223443321 234566788889999998888999999999999999 99999999999999999
Q ss_pred cCCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCCcccc
Q psy11254 315 RFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALL 363 (741)
Q Consensus 315 ~~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld~al~ 363 (741)
|++++|+..+..+.+++.++.. ..++++|++||+++.+-..+.
T Consensus 167 ---Pt~~LD~~~~~~i~~~i~~l~~---~~g~tvi~vTHd~~~~~~~~d 209 (242)
T d1oxxk2 167 ---PFSNLDARMRDSARALVKEVQS---RLGVTLLVVSHDPADIFAIAD 209 (242)
T ss_dssp ---TTTTSCGGGHHHHHHHHHHHHH---HHCCEEEEEESCHHHHHHHCS
T ss_pred ---CccCCCHHHHHHHHHHHHHHHh---ccCCEEEEEECCHHHHHHhCC
Confidence 9999999999999999998854 247899999999886644333
No 18
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=99.81 E-value=2.1e-21 Score=193.48 Aligned_cols=153 Identities=20% Similarity=0.255 Sum_probs=125.9
Q ss_pred HHHhhhCCCCCCC--ceEEcCCCChHHHHHHHHHHhcCCCceeeeccccc-----------------------------c
Q psy11254 195 ELFQRVGITPPKG--CLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV-----------------------------T 243 (741)
Q Consensus 195 ~~~~~~~l~~~~G--vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~-----------------------------~ 243 (741)
.++++++|++++| +.|+||||||||||+|+|+|...++.|++...... +
T Consensus 19 ~al~~vsl~i~~Ge~~~iiG~sGsGKSTLl~~i~Gl~~p~sG~I~~~g~~i~~~~~~~~~~~rr~ig~VfQ~~~l~~~~t 98 (240)
T d3dhwc1 19 QALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRT 98 (240)
T ss_dssp EEEEEEEEEECSSCEEEEEESTTSSHHHHHHHHTTSSCCSEEEEEETTEEECTTCHHHHHHHHHHEEECCSSCCCCTTSB
T ss_pred EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHcCCccccCCceEEcCeEeeeCChhhhhhhhccccccccccccCCCcc
Confidence 4689999999999 78999999999999999999999998887653211 1
Q ss_pred hhhHHHHHh------hhhhhhcccccccccccCCCccchhhhhcchHHHHHHHHHHHHHhcCCeEEEeccccccccccCC
Q psy11254 244 SKEDMAILM------GNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 317 (741)
Q Consensus 244 ~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~~~~~~ 317 (741)
..+++.+.. ..+.+.++..+++.+++.......+.++|||++|++ ++++|+.++|.|||+||
T Consensus 99 v~eni~~~l~~~~~~~~~~~~~v~~~L~~vgL~~~~~~~~~~LSGG~~QRv--aiAraL~~~P~lLllDE---------- 166 (240)
T d3dhwc1 99 VFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRV--AIARALASNPKVLLCDE---------- 166 (240)
T ss_dssp HHHHHHHHHHTTTCCTTHHHHHHHHHHHHHSTTTTTSSCBSCCCHHHHHHH--HHHHHHHTCCSEEEEES----------
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHH--HHhhhhccCCCeEEecc----------
Confidence 112222211 123456778889999998888899999999999999 99999999999999999
Q ss_pred CCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCCccc
Q psy11254 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPAL 362 (741)
Q Consensus 318 p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld~al 362 (741)
|++++|+..+..+.+++.++.. ..+++||++||+++.+...+
T Consensus 167 Pt~~LD~~~~~~i~~~l~~l~~---~~g~tvi~vTHdl~~~~~~~ 208 (240)
T d3dhwc1 167 ATSALDPATTRSILELLKDINR---RLGLTILLITHEMDVVKRIC 208 (240)
T ss_dssp GGGSSCHHHHHHHHHHHHHHHH---HHCCEEEEEBSCHHHHHHHC
T ss_pred ccccCCHHHhhHHHHHHHHHHh---ccCCEEEEEcCCHHHHHHhC
Confidence 9999999999999999999864 34789999999998765433
No 19
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.80 E-value=1.1e-20 Score=187.37 Aligned_cols=148 Identities=16% Similarity=0.271 Sum_probs=117.3
Q ss_pred HHhhhCCCCCCC--ceEEcCCCChHHHHHHHHHHhcCCCceeeeccccc------------------------------c
Q psy11254 196 LFQRVGITPPKG--CLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV------------------------------T 243 (741)
Q Consensus 196 ~~~~~~l~~~~G--vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~------------------------------~ 243 (741)
++++++|++++| +.|+||||||||||+++|+|...|+.|++...... +
T Consensus 20 al~~isl~i~~Ge~~~iiG~sGsGKSTLl~~i~gl~~p~sG~I~~~g~~i~~~~~~~~~~~r~~~ig~v~Q~~~l~~~~t 99 (230)
T d1l2ta_ 20 ALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLT 99 (230)
T ss_dssp EEEEEEEEECTTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECTTCCHHHHHHHHHHHEEEECTTCCCCTTSC
T ss_pred EEeceEEEEcCCCEEEEECCCCCCcchhhHhccCCCCCCcceeEECCEEcCcCChhhcchhhcceEEEEecchhhCcCcc
Confidence 689999999999 78999999999999999999999998887643211 1
Q ss_pred hhhHHHHHh---------hhhhhhcccccccccccCCC-ccchhhhhcchHHHHHHHHHHHHHhcCCeEEEecccccccc
Q psy11254 244 SKEDMAILM---------GNQLKRRSTHHLEKTYFPFY-SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGG 313 (741)
Q Consensus 244 ~~~~~~~~~---------~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~~ 313 (741)
..+++.... ..+...++...++.+++... ....+.++|||++|++ ++++|+..+|.|||+||
T Consensus 100 v~eni~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~p~~LSGGqkQRv--aIAraL~~~P~lLllDE------ 171 (230)
T d1l2ta_ 100 ALENVELPLIFKYRGAMSGEERRKRALECLKMAELEERFANHKPNQLSGGQQQRV--AIARALANNPPIILADQ------ 171 (230)
T ss_dssp HHHHHHHHHHTCCSSCCCHHHHHHHHHHHHHHTTCCGGGTTCCGGGSCHHHHHHH--HHHHHHTTCCSEEEEES------
T ss_pred HHHHHhHHHHHhccCCCCHHHHHHHHHHHHHhhchhhhhhcCChhhCCHHHHHHH--HHHhhhhcCCCEEEecC------
Confidence 112222211 11233445566677777653 5677899999999999 99999999999999999
Q ss_pred ccCCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCC
Q psy11254 314 RRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTL 358 (741)
Q Consensus 314 ~~~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~l 358 (741)
||+++|+..+..+++++..+.. ..++++|++||+++..
T Consensus 172 ----PTs~LD~~~~~~i~~~l~~l~~---~~g~tii~vTHd~~~a 209 (230)
T d1l2ta_ 172 ----PTGALDSKTGEKIMQLLKKLNE---EDGKTVVVVTHDINVA 209 (230)
T ss_dssp ----TTTTSCHHHHHHHHHHHHHHHH---TTCCEEEEECSCHHHH
T ss_pred ----CccccCHHHHHHHHHHHHHHHH---hhCCEEEEECCCHHHH
Confidence 9999999999999999999864 4578999999987644
No 20
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=99.80 E-value=3.5e-21 Score=192.87 Aligned_cols=162 Identities=15% Similarity=0.166 Sum_probs=129.8
Q ss_pred hhccCCChHHHhhhCCCCCCC--ceEEcCCCChHHHHHHHHHHhcCCCceeeecccc-----------------------
Q psy11254 187 IELPLLNPELFQRVGITPPKG--CLLYGPPGTGKTLLARAVASQLDANFLKVVSSLF----------------------- 241 (741)
Q Consensus 187 i~~~~~~~~~~~~~~l~~~~G--vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~----------------------- 241 (741)
+...|+...++++++|++.+| ++|+||||||||||+++|+|.+.|+.|++.....
T Consensus 8 l~k~yg~~~vl~~vs~~v~~Gei~glvG~nGaGKSTLl~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~i~~vpq~~~~~ 87 (238)
T d1vpla_ 8 LRKRIGKKEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFGKNVVEEPHEVRKLISYLPEEAGAY 87 (238)
T ss_dssp EEEEETTEEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHTTSSCCSEEEEEETTEETTTCHHHHHTTEEEECTTCCCC
T ss_pred EEEEECCEEEEccceeEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCCEEEECcEecccChHHHHhhEeEeeeccccC
Confidence 456678889999999999999 7799999999999999999999999888864321
Q ss_pred --cchhhHHHHHh------hhhhhhcccccccccccCCCccchhhhhcchHHHHHHHHHHHHHhcCCeEEEecccccccc
Q psy11254 242 --VTSKEDMAILM------GNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGG 313 (741)
Q Consensus 242 --~~~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~~ 313 (741)
.+..+.+.+.. ..+...++...++.+++.......+..+|||++|++ ++++|+..+|.||||||
T Consensus 88 ~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lSgG~~qrv--~iA~al~~~p~illLDE------ 159 (238)
T d1vpla_ 88 RNMQGIEYLRFVAGFYASSSSEIEEMVERATEIAGLGEKIKDRVSTYSKGMVRKL--LIARALMVNPRLAILDE------ 159 (238)
T ss_dssp TTSBHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCGGGGGSBGGGCCHHHHHHH--HHHHHHTTCCSEEEEES------
T ss_pred CCccHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCHHHHhhhhhhCCHHHHHHH--HHHHHHhcCCCEEEecC------
Confidence 11112222211 122334455666667777777888999999999999 99999999999999999
Q ss_pred ccCCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCCccccC
Q psy11254 314 RRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLR 364 (741)
Q Consensus 314 ~~~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld~al~r 364 (741)
|++++|+..++.+.+++.++.. .+.+||++||+++++...+.|
T Consensus 160 ----Pt~gLD~~~~~~i~~~i~~~~~----~g~tii~~tH~l~~~~~~~dr 202 (238)
T d1vpla_ 160 ----PTSGLDVLNAREVRKILKQASQ----EGLTILVSSHNMLEVEFLCDR 202 (238)
T ss_dssp ----TTTTCCHHHHHHHHHHHHHHHH----TTCEEEEEECCHHHHTTTCSE
T ss_pred ----CCCCCCHHHHHHHHHHHHHHHh----cCCEEEEEeCCHHHHHHhCCE
Confidence 9999999999999999998864 468999999999987655444
No 21
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.80 E-value=1.4e-20 Score=190.83 Aligned_cols=162 Identities=19% Similarity=0.210 Sum_probs=127.0
Q ss_pred hhccCCChHHHhhhCCCCCCC--ceEEcCCCChHHHHHHHHHHhcCCCceeeeccccc----------------------
Q psy11254 187 IELPLLNPELFQRVGITPPKG--CLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV---------------------- 242 (741)
Q Consensus 187 i~~~~~~~~~~~~~~l~~~~G--vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~---------------------- 242 (741)
++..|+...++++++|++++| ++|+||||||||||+|+|+|.+.++.|++......
T Consensus 10 lsk~yg~~~aL~~vs~~v~~Gei~~liG~nGaGKSTLl~~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~gi~~v~Q~~~ 89 (254)
T d1g6ha_ 10 IVKYFGEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQ 89 (254)
T ss_dssp EEEEETTEEEEEEECCEEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECTTCCHHHHHHHTEEECCCCCG
T ss_pred EEEEECCeEEEcceEEEECCCCEEEEECCCCCcHHHHHHHHHCCCcCCCcEEEECCEeccchhHHHHHHhcCCccCCccc
Confidence 445567778899999999999 78999999999999999999999998888643210
Q ss_pred -----chhhHHHHHh-------------------hhhhhhcccccccccccCCCccchhhhhcchHHHHHHHHHHHHHhc
Q psy11254 243 -----TSKEDMAILM-------------------GNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNH 298 (741)
Q Consensus 243 -----~~~~~~~~~~-------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~ 298 (741)
+..+++.... ......++..+++.+++....+..+..+|||++|++ .+++|+..
T Consensus 90 ~~~~ltv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~Qrv--~iAraL~~ 167 (254)
T d1g6ha_ 90 PLKEMTVLENLLIGEICPGESPLNSLFYKKWIPKEEEMVEKAFKILEFLKLSHLYDRKAGELSGGQMKLV--EIGRALMT 167 (254)
T ss_dssp GGGGSBHHHHHHGGGTSTTSCHHHHHHHCSSCCCCHHHHHHHHHHHHHTTCGGGTTSBGGGSCHHHHHHH--HHHHHHHT
T ss_pred cCCCCeeeeeeeehhhhccccchhhhhhhcccccHHHHHHHHHHHHHhcCcchhccCchhhCCcHHHHHH--HHHHHHHh
Confidence 1111111100 001123344556666776667788999999999999 99999999
Q ss_pred CCeEEEeccccccccccCCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCCccccC
Q psy11254 299 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLR 364 (741)
Q Consensus 299 ~P~ILllDEid~l~~~~~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld~al~r 364 (741)
+|.+|++|| |++++|+..+..+.+++.++.. .+++||++||+++++...+.|
T Consensus 168 ~P~llilDE----------Pt~gLD~~~~~~i~~~i~~l~~----~g~til~vsHdl~~~~~~~Dr 219 (254)
T d1g6ha_ 168 NPKMIVMDE----------PIAGVAPGLAHDIFNHVLELKA----KGITFLIIEHRLDIVLNYIDH 219 (254)
T ss_dssp CCSEEEEES----------TTTTCCHHHHHHHHHHHHHHHH----TTCEEEEECSCCSTTGGGCSE
T ss_pred CcCchhhcC----------CcccCCHHHHHHHHHHHHHHHH----CCCEEEEEeCcHHHHHHhCCE
Confidence 999999999 9999999999999999998864 478999999999998765544
No 22
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=99.78 E-value=1.4e-19 Score=183.12 Aligned_cols=165 Identities=21% Similarity=0.255 Sum_probs=113.8
Q ss_pred ccccChHHHHHHHHHHhhccCCChHHHhhhCCCCCCCceEEcCCCChHHHHHHHHHHhcCCCceeeecccccchhhHHHH
Q psy11254 171 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMAI 250 (741)
Q Consensus 171 ~~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~GvlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~~~~~~~~~ 250 (741)
+.|.|..+.++.|.+...... +..+.....+++|+||+||||||||+++++||++++.++..+..+
T Consensus 9 ~~~i~~~~~i~~i~~~~~~~~---~~~~~~~~~p~~~vLL~GppGtGKT~la~alA~~~~~~~~~i~~~----------- 74 (246)
T d1d2na_ 9 NGIIKWGDPVTRVLDDGELLV---QQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSP----------- 74 (246)
T ss_dssp TCCCCCSHHHHHHHHHHHHHH---HHHHHCSSCSEEEEEEECSTTSSHHHHHHHHHHHHTCSEEEEECG-----------
T ss_pred cCCcCcCHHHHHHHHHHHHHH---HHHhccCCCCCeEEEEECcCCCCHHHHHHHHhhcccccccccccc-----------
Confidence 345555555555554443211 112233345667899999999999999999999999999888652
Q ss_pred HhhhhhhhcccccccccccCCCccchhhhhcchH-HHHHHHHHHHHHhcCCeEEEeccccccccccCCCCCCccHHHHHH
Q psy11254 251 LMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGES-ARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRT 329 (741)
Q Consensus 251 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~-~~~v~~~~~~A~~~~P~ILllDEid~l~~~~~~p~~~lD~~~~~~ 329 (741)
+.+..++++. .+.++++|..|...+||||||||+|+++..+... ..... +.
T Consensus 75 ------------------------~~~~g~~~~~~~~~i~~if~~A~~~~p~il~iDEid~l~~~~~~~-~~~~~---~~ 126 (246)
T d1d2na_ 75 ------------------------DKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIG-PRFSN---LV 126 (246)
T ss_dssp ------------------------GGCTTCCHHHHHHHHHHHHHHHHTSSEEEEEECCHHHHTTCBTTT-TBCCH---HH
T ss_pred ------------------------cccccccccchhhhhhhhhhhhhhcccceeehhhhhhHhhhcccc-cchhH---HH
Confidence 2223344544 4668899999999999999999999998766432 12222 34
Q ss_pred HHHHHHhccCCCC-CCCeEEEEeeCCCCCCCccccCCCccceeeecCCCC
Q psy11254 330 LMELLNQMDGFDS-LGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPN 378 (741)
Q Consensus 330 l~~lL~~l~~~~~-~~~v~vI~at~~~~~ld~al~r~gr~d~~i~~~~p~ 378 (741)
+..++..+++... ..+|.||+|||+++.+|++.++ +||+..|++|.+.
T Consensus 127 ~~~ll~~l~~~~~~~~~v~vi~tTn~~~~ld~~~~~-~rF~~~i~~P~~~ 175 (246)
T d1d2na_ 127 LQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEML-NAFSTTIHVPNIA 175 (246)
T ss_dssp HHHHHHHTTCCCSTTCEEEEEEEESCHHHHHHTTCT-TTSSEEEECCCEE
T ss_pred HHHHHHHhcCCCccccceeeeeccCChhhccchhhc-CccceEEecCCch
Confidence 4455666665432 3468889999999999876443 6999999986554
No 23
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=99.78 E-value=6.7e-21 Score=191.14 Aligned_cols=160 Identities=14% Similarity=0.165 Sum_probs=120.9
Q ss_pred hhccCCChHHHhhhCCCCCCC--ceEEcCCCChHHHHHHHHHHhcCCCceeeeccccc----------------------
Q psy11254 187 IELPLLNPELFQRVGITPPKG--CLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV---------------------- 242 (741)
Q Consensus 187 i~~~~~~~~~~~~~~l~~~~G--vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~---------------------- 242 (741)
+...|+...++++++|++++| ++|+||||||||||+|+|+|.+.++.+++......
T Consensus 12 l~k~yg~~~al~~vs~~i~~Gei~~liGpnGaGKSTl~~~i~Gl~~p~~G~I~~~G~~i~~~~~~~~~r~gi~~~~q~~~ 91 (240)
T d1ji0a_ 12 LHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHVINRMGIALVPEGRR 91 (240)
T ss_dssp EEEEETTEEEEEEEEEEEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECTTCCHHHHHHTTEEEECSSCC
T ss_pred EEEEECCEEEEeeeeEEECCCCEEEEECCCCCcHHHHHHHHhCCCCCCccEEEecccccccccHHHHHHhcccccCcccc
Confidence 345567778999999999999 77999999999999999999999998887643210
Q ss_pred -----chhhHHHHHhh-----hhhhhccccccccc-ccCCCccchhhhhcchHHHHHHHHHHHHHhcCCeEEEecccccc
Q psy11254 243 -----TSKEDMAILMG-----NQLKRRSTHHLEKT-YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI 311 (741)
Q Consensus 243 -----~~~~~~~~~~~-----~~~~~~~~~~l~~~-~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l 311 (741)
+..+++..... ....+.....++.+ ++.......+.++|||++|++ .+++|+..+|++||+||
T Consensus 92 l~~~ltv~en~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~LSGG~~Qrv--~iAraL~~~P~lLllDE---- 165 (240)
T d1ji0a_ 92 IFPELTVYENLMMGAYNRKDKEGIKRDLEWIFSLFPRLKERLKQLGGTLSGGEQQML--AIGRALMSRPKLLMMDE---- 165 (240)
T ss_dssp CCTTSBHHHHHHGGGTTCCCSSHHHHHHHHHHHHCHHHHTTTTSBSSSSCHHHHHHH--HHHHHHTTCCSEEEEEC----
T ss_pred cCCcccHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhChHHHHhCchhhCCHHHHHHH--HHHHHHHhCCCEeeecC----
Confidence 11111111100 01112222333332 345556778899999999999 99999999999999999
Q ss_pred ccccCCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCCccc
Q psy11254 312 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPAL 362 (741)
Q Consensus 312 ~~~~~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld~al 362 (741)
|++++|+..++.+.+++.++.. .+++||++||+++.+...+
T Consensus 166 ------Pt~gLD~~~~~~i~~~i~~l~~----~g~til~~tH~l~~~~~~~ 206 (240)
T d1ji0a_ 166 ------PSLGLAPILVSEVFEVIQKINQ----EGTTILLVEQNALGALKVA 206 (240)
T ss_dssp ------TTTTCCHHHHHHHHHHHHHHHH----TTCCEEEEESCHHHHHHHC
T ss_pred ------CCcCCCHHHHHHHHHHHHHHHh----CCCEEEEEeCCHHHHHHhC
Confidence 9999999999999999999865 4789999999988765433
No 24
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.77 E-value=3.1e-20 Score=184.34 Aligned_cols=147 Identities=19% Similarity=0.213 Sum_probs=118.9
Q ss_pred hhCCCCCCC-ceEEcCCCChHHHHHHHHHHhcCCCceeeecccc------------------------cchhhHHHHHh-
Q psy11254 199 RVGITPPKG-CLLYGPPGTGKTLLARAVASQLDANFLKVVSSLF------------------------VTSKEDMAILM- 252 (741)
Q Consensus 199 ~~~l~~~~G-vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~------------------------~~~~~~~~~~~- 252 (741)
+++|+..++ ++|+||||||||||+|+|+|.+.|+.|++..... .+..+++.+..
T Consensus 17 ~vs~~~~~e~~~liGpnGaGKSTll~~i~Gl~~p~~G~I~~~G~~i~~~~~~~r~ig~v~Q~~~l~~~ltV~enl~~~l~ 96 (240)
T d2onka1 17 NVDFEMGRDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPERRGIGFVPQDYALFPHLSVYRNIAYGLR 96 (240)
T ss_dssp EEEEEECSSEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCTTTSCCBCCCSSCCCCTTSCHHHHHHTTCT
T ss_pred EEEEEeCCEEEEEECCCCChHHHHHHHHHcCCCCCceEEEECCEECCcCCHHHcCceeeccchhhcccchhhHhhhhhhc
Confidence 566767655 6699999999999999999999998887754311 12233443321
Q ss_pred ---hhhhhhcccccccccccCCCccchhhhhcchHHHHHHHHHHHHHhcCCeEEEeccccccccccCCCCCCccHHHHHH
Q psy11254 253 ---GNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRT 329 (741)
Q Consensus 253 ---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~~~~~~p~~~lD~~~~~~ 329 (741)
..+..+++.++++.+++.......+.++|||++|++ ++++|+..+|.||++|| |++++|+..+..
T Consensus 97 ~~~~~~~~~~v~~~l~~~gl~~~~~~~~~~LSGG~kQRv--aiAral~~~P~illlDE----------Pts~LD~~~~~~ 164 (240)
T d2onka1 97 NVERVERDRRVREMAEKLGIAHLLDRKPARLSGGERQRV--ALARALVIQPRLLLLDE----------PLSAVDLKTKGV 164 (240)
T ss_dssp TSCHHHHHHHHHHHHHTTTCTTTTTCCGGGSCHHHHHHH--HHHHHHTTCCSSBEEES----------TTSSCCHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhcCcHhhhhCChhhCCHHHHHHH--HHHHHHhccCCceEecC----------ccccCCHHHHHH
Confidence 223456788889999999889999999999999999 99999999999999999 999999999999
Q ss_pred HHHHHHhccCCCCCCCeEEEEeeCCCCCCCc
Q psy11254 330 LMELLNQMDGFDSLGQVKMIMATNRPDTLDP 360 (741)
Q Consensus 330 l~~lL~~l~~~~~~~~v~vI~at~~~~~ld~ 360 (741)
+.+++..+.. ..++++|++||+++.+..
T Consensus 165 i~~~i~~l~~---~~g~tvi~vtHd~~~~~~ 192 (240)
T d2onka1 165 LMEELRFVQR---EFDVPILHVTHDLIEAAM 192 (240)
T ss_dssp HHHHHHHHHH---HHTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHH---hcCCeEEEEeCCHHHHHH
Confidence 9999988854 246799999999887653
No 25
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=99.77 E-value=1.4e-20 Score=190.52 Aligned_cols=162 Identities=14% Similarity=0.171 Sum_probs=127.2
Q ss_pred hhccCCChHHHhhhCCCCCCC--ceEEcCCCChHHHHHHHHHHhcCCCceeeecccc-----------------------
Q psy11254 187 IELPLLNPELFQRVGITPPKG--CLLYGPPGTGKTLLARAVASQLDANFLKVVSSLF----------------------- 241 (741)
Q Consensus 187 i~~~~~~~~~~~~~~l~~~~G--vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~----------------------- 241 (741)
+...|+...++++++|++++| ++|+||||||||||+++|+|.+.++.|++.....
T Consensus 8 l~k~yg~~~al~~vs~~i~~GEi~~iiG~sGsGKSTLl~~i~Gl~~p~~G~I~~~G~~i~~~~~~~~~~~~~~~~~~~~~ 87 (258)
T d1b0ua_ 8 LHKRYGGHEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAIIVNGQNINLVRDKDGQLKVADKNQLRLL 87 (258)
T ss_dssp EEEEETTEEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHTTSSCCSEEEEEETTEECCEEECTTSSEEESCHHHHHHH
T ss_pred EEEEECCEEEEcceeeEEcCCCEEEEECCCCCcHHHHHHHHHcCccCCCCCEEECCEEeccCCccchhcccccHhHHHHH
Confidence 344567778999999999999 7899999999999999999999998887753211
Q ss_pred ----------------cchhhHHHHHh-------hhhhhhcccccccccccCCC-ccchhhhhcchHHHHHHHHHHHHHh
Q psy11254 242 ----------------VTSKEDMAILM-------GNQLKRRSTHHLEKTYFPFY-SSAIVDKYIGESARLIREMFNYARN 297 (741)
Q Consensus 242 ----------------~~~~~~~~~~~-------~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~G~~~~~v~~~~~~A~~ 297 (741)
.+..+++.+.. ..+..+++...++.+++... ....+.++|||++|++ ++++|+.
T Consensus 88 r~~ig~vfQ~~~l~~~~tv~env~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~p~~LSGG~~QRv--~iAraL~ 165 (258)
T d1b0ua_ 88 RTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKHDARERALKYLAKVGIDERAQGKYPVHLSGGQQQRV--SIARALA 165 (258)
T ss_dssp HHHEEEECSSCCCCTTSCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCHHHHTSCGGGSCHHHHHHH--HHHHHHH
T ss_pred hcceEEEEechhhccchhcchhhhhhHHHhcCCCHHHHHHHHHHHHHHcCCchhhhccCcccccHHHHHHH--HHHHHHh
Confidence 11122333221 12344566777777787654 3557899999999999 9999999
Q ss_pred cCCeEEEeccccccccccCCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCCccccC
Q psy11254 298 HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLR 364 (741)
Q Consensus 298 ~~P~ILllDEid~l~~~~~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld~al~r 364 (741)
.+|.|||+|| |++++|+..+..+.+++.++.. .+.+||++|||++.+-..+.|
T Consensus 166 ~~P~llilDE----------PT~gLD~~~~~~i~~ll~~l~~----~g~til~vtHdl~~~~~~adr 218 (258)
T d1b0ua_ 166 MEPDVLLFDE----------PTSALDPELVGEVLRIMQQLAE----EGKTMVVVTHEMGFARHVSSH 218 (258)
T ss_dssp TCCSEEEEES----------TTTTSCHHHHHHHHHHHHHHHH----TTCCEEEECSCHHHHHHHCSE
T ss_pred cCCCEEEecc----------ccccCCHHHHHHHHHhhhhhcc----cCCceEEEeCCHHHHHHhCCE
Confidence 9999999999 9999999999999999999875 367899999999876544443
No 26
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.75 E-value=6.2e-19 Score=184.68 Aligned_cols=177 Identities=28% Similarity=0.362 Sum_probs=124.5
Q ss_pred cccChHHHHHHHHHHhhccCCChHHHhhhC-CCCCCCceEEcCCCChHHHHHHHHHHhcCCCceeeecccccchhhHHHH
Q psy11254 172 AIGGLSEQIRELREVIELPLLNPELFQRVG-ITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMAI 250 (741)
Q Consensus 172 ~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~-l~~~~GvlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~~~~~~~~~ 250 (741)
.|.|.++.|+.|.+.+..++....+..... -.+++|++|+||||||||+|||+||+.++.++..+..+.+..
T Consensus 15 ~ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~~~~~~~~i~~s~~~~------- 87 (309)
T d1ofha_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTE------- 87 (309)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHHTCCEEEEEGGGGSS-------
T ss_pred cccChHHHHHHHHHHHHHHHHHhccCCCCccCCCCceEEEECCCCCCHHHHHHHHhhccccchhccccccccc-------
Confidence 479999999999998854433322222211 125678999999999999999999999999988887643311
Q ss_pred HhhhhhhhcccccccccccCCCccchhhhhcchHHHHHHHHHHHHHh-----cCCeEEEeccccccccccCCCCCCccHH
Q psy11254 251 LMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARN-----HQPCIIFMDEIDAIGGRRFSEGTSADRE 325 (741)
Q Consensus 251 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~-----~~P~ILllDEid~l~~~~~~p~~~lD~~ 325 (741)
.+.|.|..+..++..|..|.. .+||||||||+|++++++.+. ..+..
T Consensus 88 --------------------------~~~~~~~~~~~~~~~f~~a~~~~~~~~~~~IIf~DEIdki~~~~~~~--~~~~~ 139 (309)
T d1ofha_ 88 --------------------------VGYVGKEVDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYS--GADVS 139 (309)
T ss_dssp --------------------------CCSGGGSTTHHHHHHHHTTTTCHHHHHHHCEEEEECGGGGSCCSSCC--SSHHH
T ss_pred --------------------------ceeEeeeccccccccchhhhcccccccCCceEEehhhhhhhhhccCc--ccchh
Confidence 134566666777777877754 358999999999999876443 33333
Q ss_pred HHHHHHHHHHhccCCC--------CCCCeEEEEe----eCCCCCCCccccCCCccceeeecCCCCHHHHHhc
Q psy11254 326 IQRTLMELLNQMDGFD--------SLGQVKMIMA----TNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAH 385 (741)
Q Consensus 326 ~~~~l~~lL~~l~~~~--------~~~~v~vI~a----t~~~~~ld~al~r~gr~d~~i~~~~p~~~~r~~i 385 (741)
....+.++|..+++.. ..+++.+|++ +++++.++|.+. |||+..+.++.|+...+.+|
T Consensus 140 ~~gv~~~LL~~~dg~~~~~~~~~i~~s~ilfi~~ga~~~~~~~~~~p~l~--~R~~~~i~~~~~~~~~~~~I 209 (309)
T d1ofha_ 140 REGVQRDLLPLVEGSTVSTKHGMVKTDHILFIASGAFQVARPSDLIPELQ--GRLPIRVELTALSAADFERI 209 (309)
T ss_dssp HHHHHHHHHHHHHCCEEEETTEEEECTTCEEEEEECCSSSCGGGSCHHHH--HTCCEEEECCCCCHHHHHHH
T ss_pred hhHHHHHhhHHhcCCEEecCCeEEEccceeEEeccchhhcCcccchhhhh--hhhheeeeccCCCHHHHHHH
Confidence 3345566776676521 1234555554 456666777776 59999999999999999887
No 27
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=99.74 E-value=1.2e-18 Score=176.08 Aligned_cols=151 Identities=15% Similarity=0.183 Sum_probs=108.3
Q ss_pred CChHHHhhhCCCCCCC--ceEEcCCCChHHHHHHHHHHhcCCCceeeecccccch-------------------------
Q psy11254 192 LNPELFQRVGITPPKG--CLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTS------------------------- 244 (741)
Q Consensus 192 ~~~~~~~~~~l~~~~G--vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~~~------------------------- 244 (741)
....++++++|++++| ++|+||||||||||+++|+|.+.|..+++........
T Consensus 26 ~~~~~L~~isl~i~~Ge~iaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti 105 (253)
T d3b60a1 26 REVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTV 105 (253)
T ss_dssp SSCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEETTEETTTBCHHHHHHTEEEECSSCCCCSSBH
T ss_pred CCCceeeceEEEEcCCCEEEEECCCCChHHHHHHHHhcccCCCccEEEECCcccchhhhhhhhheEEEEeeccccCCcch
Confidence 3456899999999999 8899999999999999999999998888864321100
Q ss_pred hhHHHHHh-hhhhhhccccccccc-----------ccCCCccchhhhhcchHHHHHHHHHHHHHhcCCeEEEeccccccc
Q psy11254 245 KEDMAILM-GNQLKRRSTHHLEKT-----------YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIG 312 (741)
Q Consensus 245 ~~~~~~~~-~~~~~~~~~~~l~~~-----------~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~ 312 (741)
..++.... ......++..+++.. ++.....+....+|||++|++ ++++|+..+|.||+|||
T Consensus 106 ~~n~~~~~~~~~~~~~i~~a~~~~~l~~~i~~l~~gl~t~~~~~~~~LSGGqkQRv--aiARal~~~p~ililDE----- 178 (253)
T d3b60a1 106 ANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRI--AIARALLRDSPILILDE----- 178 (253)
T ss_dssp HHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSCHHHHHHH--HHHHHHHHCCSEEEEET-----
T ss_pred hhhhhhcCcccCCHHHHHHHHHHHhHHHHHHhccccchhhhcCCCCCcCHHHHHHH--HHHHHHhcCCCEEEecc-----
Confidence 01111100 000011111111111 122222334457999999999 99999999999999999
Q ss_pred cccCCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCC
Q psy11254 313 GRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLD 359 (741)
Q Consensus 313 ~~~~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld 359 (741)
|++++|+.....+.+++..+.. +.++|++||+++.+.
T Consensus 179 -----pts~LD~~~~~~i~~~l~~l~~-----~~Tvi~itH~l~~~~ 215 (253)
T d3b60a1 179 -----ATSALDTESERAIQAALDELQK-----NRTSLVIAHRLSTIE 215 (253)
T ss_dssp -----TTSSCCHHHHHHHHHHHHHHHT-----TSEEEEECSCGGGTT
T ss_pred -----ccccCCHHHHHHHHHHHHHhcc-----CCEEEEEECCHHHHH
Confidence 9999999999999999988753 458999999998774
No 28
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=3.5e-19 Score=179.68 Aligned_cols=150 Identities=15% Similarity=0.216 Sum_probs=106.8
Q ss_pred HHHhhhCCCCCCC--ceEEcCCCChHHHHHHHHHHhcCCCceeeecccccch-------------------------hhH
Q psy11254 195 ELFQRVGITPPKG--CLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTS-------------------------KED 247 (741)
Q Consensus 195 ~~~~~~~l~~~~G--vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~~~-------------------------~~~ 247 (741)
.++++++|++++| ++|+||||||||||+++|+|.+.|..|++........ .++
T Consensus 28 ~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~li~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~en 107 (251)
T d1jj7a_ 28 LVLQGLTFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGKPLPQYEHRYLHRQVAAVGQEPQVFGRSLQEN 107 (251)
T ss_dssp CSEEEEEEEECTTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEEGGGBCHHHHHHHEEEECSSCCCCSSBHHHH
T ss_pred EeEeceEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCcCEEEECCEecchhhhHHHHHHhhhccccccccCcchhhh
Confidence 4899999999999 8899999999999999999999999888764321100 011
Q ss_pred HHHHhhh-----h-----hhhccccccccc--ccCCCccchhhhhcchHHHHHHHHHHHHHhcCCeEEEecccccccccc
Q psy11254 248 MAILMGN-----Q-----LKRRSTHHLEKT--YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315 (741)
Q Consensus 248 ~~~~~~~-----~-----~~~~~~~~l~~~--~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~~~~ 315 (741)
+...... . ........++.+ ++.....+....+|||++|++ ++++|+..+|.||++||
T Consensus 108 i~~g~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~i~~~~~~LSGGqkQRv--aiARal~~~p~ililDE-------- 177 (251)
T d1jj7a_ 108 IAYGLTQKPTMEEITAAAVKSGAHSFISGLPQGYDTEVDEAGSQLSGGQRQAV--ALARALIRKPCVLILDD-------- 177 (251)
T ss_dssp HHCSCSSCCCHHHHHHHHHHHTCHHHHHTSTTGGGCBCCSSCSSSCHHHHHHH--HHHHHHTTCCSEEEEES--------
T ss_pred hhhhhcccchHHHHHHHHHHHHHHHHHHhccccchhhHhccCccCChhHceEE--EEeeccccCCcEEEecC--------
Confidence 1110000 0 000011111111 222222344567999999999 99999999999999999
Q ss_pred CCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCC
Q psy11254 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLD 359 (741)
Q Consensus 316 ~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld 359 (741)
|++++|+.....+.+++..+.. ..+.++|++||+++.+.
T Consensus 178 --pTs~LD~~~~~~i~~~l~~l~~---~~~~Tvi~itH~l~~~~ 216 (251)
T d1jj7a_ 178 --ATSALDANSQLQVEQLLYESPE---RYSRSVLLITQHLSLVE 216 (251)
T ss_dssp --TTTTCCHHHHHHHHHHHHTCGG---GGGCEEEEECSCHHHHH
T ss_pred --cCcccChhhHHHHHHHHHHHhh---hcCCEEEEEeCCHHHHH
Confidence 9999999999999999987654 34679999999987553
No 29
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=99.72 E-value=2.4e-18 Score=172.22 Aligned_cols=151 Identities=14% Similarity=0.197 Sum_probs=107.8
Q ss_pred CChHHHhhhCCCCCCC--ceEEcCCCChHHHHHHHHHHhcCCCceeeecccccch-------------------------
Q psy11254 192 LNPELFQRVGITPPKG--CLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTS------------------------- 244 (741)
Q Consensus 192 ~~~~~~~~~~l~~~~G--vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~~~------------------------- 244 (741)
..+.++++++|++++| ++++||+|||||||+++|+|.+.+..|++........
T Consensus 14 ~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Ti 93 (241)
T d2pmka1 14 DSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSI 93 (241)
T ss_dssp TSCEEEEEEEEEEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCTTSBH
T ss_pred CCcceEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCCCCEEEECCEEecccchhhhhceEEEEecccccCCccc
Confidence 5566899999999999 8899999999999999999999998888765321100
Q ss_pred hhHHHHHhhhhhhhcc---------cccccc--cccCCCccchhhhhcchHHHHHHHHHHHHHhcCCeEEEecccccccc
Q psy11254 245 KEDMAILMGNQLKRRS---------THHLEK--TYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGG 313 (741)
Q Consensus 245 ~~~~~~~~~~~~~~~~---------~~~l~~--~~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~~ 313 (741)
.+++.....+....+. ...+.. .++..........+|||++|++ ++++|+..+|+||+|||
T Consensus 94 ~eNi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~t~i~~~g~~LSGGq~QRv--alARal~~~p~ililDE------ 165 (241)
T d2pmka1 94 IDNISLANPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRI--AIARALVNNPKILIFDE------ 165 (241)
T ss_dssp HHHHCTTSTTCCHHHHHHHHHHHTCHHHHTTSTTGGGSBCSTTTTCCCHHHHHHH--HHHHHHTTCCSEEEECC------
T ss_pred cccccccCccccHHHHHHHHHHHhhHHHHHhhhcchhhhcCCCCCccCHHHHHHH--hhhhhhhcccchhhhhC------
Confidence 0111110000000000 000111 1111112233467999999999 99999999999999999
Q ss_pred ccCCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCC
Q psy11254 314 RRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLD 359 (741)
Q Consensus 314 ~~~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld 359 (741)
|++++|+...+.+.+.+..+.. +.++|++||+++.+.
T Consensus 166 ----pts~LD~~~~~~i~~~l~~l~~-----~~Tvi~itH~l~~~~ 202 (241)
T d2pmka1 166 ----ATSALDYESEHVIMRNMHKICK-----GRTVIIIAHRLSTVK 202 (241)
T ss_dssp ----CCSCCCHHHHHHHHHHHHHHHT-----TSEEEEECSSGGGGT
T ss_pred ----CccccCHHHHHHHHHHHHHHhC-----CCEEEEEECCHHHHH
Confidence 9999999999999999988753 569999999998764
No 30
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=99.72 E-value=7.5e-19 Score=177.19 Aligned_cols=153 Identities=14% Similarity=0.168 Sum_probs=109.6
Q ss_pred cCCChHHHhhhCCCCCCC--ceEEcCCCChHHHHHHHHHHhcCCCceeeecccccc------------------------
Q psy11254 190 PLLNPELFQRVGITPPKG--CLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVT------------------------ 243 (741)
Q Consensus 190 ~~~~~~~~~~~~l~~~~G--vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~~------------------------ 243 (741)
+-..+.++++++|++++| ++|+||+|||||||+++|+|.+.+..|.+.......
T Consensus 27 ~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~ 106 (255)
T d2hyda1 27 NDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSD 106 (255)
T ss_dssp CSSSCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEEEEETTEEGGGSCHHHHHHTEEEECSSCCCCSS
T ss_pred CCCCCcceeceEEEEcCCCEEEEECCCCCcHHHHHHHHHhcCCccccccccCCEEcccCCHHHhhheeeeeeccccCCCC
Confidence 334466899999999999 889999999999999999999999888886432110
Q ss_pred -hhhHHHHHhhhhhhhccccccccc-----------ccCCCccchhhhhcchHHHHHHHHHHHHHhcCCeEEEecccccc
Q psy11254 244 -SKEDMAILMGNQLKRRSTHHLEKT-----------YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI 311 (741)
Q Consensus 244 -~~~~~~~~~~~~~~~~~~~~l~~~-----------~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l 311 (741)
..+++...........+..+++.. ++.....+....+|||++|++ ++++|+..+|.||+|||
T Consensus 107 Ti~eNi~~g~~~~~~~~~~~al~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~QRi--~iARal~~~p~ililDE---- 180 (255)
T d2hyda1 107 TVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRL--SIARIFLNNPPILILDE---- 180 (255)
T ss_dssp BHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTTSCHHHHHHH--HHHHHHHHCCSEEEEES----
T ss_pred CHHHHHhccCcCCCHHHHHHHHHHhCCHHHHHhccccccchhcCCCCCcCHHHHHHH--HHHHHHhcCCCEEEEeC----
Confidence 011111110010111111122211 122222334456899999999 99999999999999999
Q ss_pred ccccCCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCC
Q psy11254 312 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLD 359 (741)
Q Consensus 312 ~~~~~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld 359 (741)
|++++|+.+...+.+.+..+.. +.++|++||+++.+.
T Consensus 181 ------pts~LD~~t~~~i~~~l~~l~~-----~~TvI~itH~~~~~~ 217 (255)
T d2hyda1 181 ------ATSALDLESESIIQEALDVLSK-----DRTTLIVAHRLSTIT 217 (255)
T ss_dssp ------TTTTCCHHHHHHHHHHHHHHTT-----TSEEEEECSSGGGTT
T ss_pred ------ccccCCHHHHHHHHHHHHHHhc-----CCEEEEEeCCHHHHH
Confidence 9999999999999999988753 458999999998775
No 31
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=99.70 E-value=3e-18 Score=167.24 Aligned_cols=155 Identities=14% Similarity=0.171 Sum_probs=111.2
Q ss_pred hccCCChHHHhhhCCCCCCC--ceEEcCCCChHHHHHHHHHHhcCCCceeeecccc---------------------cch
Q psy11254 188 ELPLLNPELFQRVGITPPKG--CLLYGPPGTGKTLLARAVASQLDANFLKVVSSLF---------------------VTS 244 (741)
Q Consensus 188 ~~~~~~~~~~~~~~l~~~~G--vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~---------------------~~~ 244 (741)
.+.+. .+++++++|++++| ++|+||||||||||+++|+|.+.|..|++..... ...
T Consensus 9 s~~y~-~~vl~~is~~i~~Gei~~l~G~NGsGKSTLl~~i~gl~~p~~G~I~~~g~~i~~~~~~i~~~~~~~~~~~~~t~ 87 (200)
T d1sgwa_ 9 SVGYD-KPVLERITMTIEKGNVVNFHGPNGIGKTTLLKTISTYLKPLKGEIIYNGVPITKVKGKIFFLPEEIIVPRKISV 87 (200)
T ss_dssp EEESS-SEEEEEEEEEEETTCCEEEECCTTSSHHHHHHHHTTSSCCSEEEEEETTEEGGGGGGGEEEECSSCCCCTTSBH
T ss_pred EEEeC-CeEEeceEEEEcCCCEEEEECCCCChHHHHHHHHhcccccCCCEEEECCEehhHhcCcEEEEeecccCCCCcCH
Confidence 34443 45899999999999 7799999999999999999999999888865321 011
Q ss_pred hhHHHHH---hhhh-hhhcccccccccccCCCccchhhhhcchHHHHHHHHHHHHHhcCCeEEEeccccccccccCCCCC
Q psy11254 245 KEDMAIL---MGNQ-LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGT 320 (741)
Q Consensus 245 ~~~~~~~---~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~~~~~~p~~ 320 (741)
.+.+... .+.. ....+...++.+.+.. ..+.+.++|||+++++ .+++|+..+|+|++||| |++
T Consensus 88 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~LSgG~~qrv--~ia~al~~~~~llllDE----------Pt~ 154 (200)
T d1sgwa_ 88 EDYLKAVASLYGVKVNKNEIMDALESVEVLD-LKKKLGELSQGTIRRV--QLASTLLVNAEIYVLDD----------PVV 154 (200)
T ss_dssp HHHHHHHHHHTTCCCCHHHHHHHHHHTTCCC-TTSBGGGSCHHHHHHH--HHHHHTTSCCSEEEEES----------TTT
T ss_pred HHHHHHHHHhcCCccCHHHHHHHHHHcCCcc-cccccCcCCCcHHHHH--HHHHHHhcCCCEEEEcC----------ccc
Confidence 1111111 1111 1223334444444332 2456789999999999 99999999999999999 999
Q ss_pred CccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCC
Q psy11254 321 SADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLD 359 (741)
Q Consensus 321 ~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld 359 (741)
++|+..+..+.+.+.++.. ..++++|.++|+....|
T Consensus 155 gLD~~~~~~i~~~l~~~~~---~~~~~ii~~~~~l~~~D 190 (200)
T d1sgwa_ 155 AIDEDSKHKVLKSILEILK---EKGIVIISSREELSYCD 190 (200)
T ss_dssp TSCTTTHHHHHHHHHHHHH---HHSEEEEEESSCCTTSS
T ss_pred ccCHHHHHHHHHHHHHHHh---CCCEEEEEEechhhhcc
Confidence 9999999988888877643 24567777777665544
No 32
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=99.69 E-value=4.6e-18 Score=169.64 Aligned_cols=152 Identities=13% Similarity=0.053 Sum_probs=111.9
Q ss_pred HHhhhCCCCCCC--ceEEcCCCChHHHHHHHHHHhcCCCceeeeccccc--ch-hhH-------------------HHH-
Q psy11254 196 LFQRVGITPPKG--CLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV--TS-KED-------------------MAI- 250 (741)
Q Consensus 196 ~~~~~~l~~~~G--vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~--~~-~~~-------------------~~~- 250 (741)
.+++++|++++| +.|+||||||||||+++|+|.. +..+++...... .. ... +..
T Consensus 14 ~l~~isl~I~~Gei~~iiG~nGaGKSTLl~~l~Gl~-~~~G~I~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 92 (231)
T d1l7vc_ 14 RLGPLSGEVRAGEILHLVGPNGAGKSTLLARMAGMT-SGKGSIQFAGQPLEAWSATKLALHRAYLSQQQTPPFATPVWHY 92 (231)
T ss_dssp TSCSEEEEEETTCEEECBCCTTSSHHHHHHHHHTSC-CCSSEEEESSSBGGGSCHHHHHHHEEEECSCCCCCSSCBHHHH
T ss_pred eecCEEEEEcCCCEEEEECCCCCcHHHHHHHHhCCC-CCceEEEECCEECCcCCHHHHHhhceeeeccccCCccccHHHH
Confidence 467789999999 7899999999999999999954 566666432110 00 000 000
Q ss_pred Hh-h---hhhhhcccccccccccCCCccchhhhhcchHHHHHHHHHHHHHhc-------CCeEEEeccccccccccCCCC
Q psy11254 251 LM-G---NQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNH-------QPCIIFMDEIDAIGGRRFSEG 319 (741)
Q Consensus 251 ~~-~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~-------~P~ILllDEid~l~~~~~~p~ 319 (741)
+. + ....+++...++.+++.......+..+|||++|++ .+++|+.+ +|.||++|| |+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~LSgG~~Qrv--~iA~al~~~~p~~~p~p~llllDE----------Pt 160 (231)
T d1l7vc_ 93 LTLHQHDKTRTELLNDVAGALALDDKLGRSTNQLSGGEWQRV--RLAAVVLQITPQANPAGQLLLLDE----------PM 160 (231)
T ss_dssp HHHHCSCTTCHHHHHHHHHHTTCTTTTTSBGGGCCHHHHHHH--HHHHHHHHHCTTTCTTCCEEEESS----------CS
T ss_pred hhhccchhhHHHHHHHHHHhcCCHhHhCcChhhcCHHHHHHH--HHHHHHHhhCcccCCCCCEEEEcC----------CC
Confidence 00 0 01122344555566677677788899999999999 99999876 679999999 99
Q ss_pred CCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCCccccC
Q psy11254 320 TSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLR 364 (741)
Q Consensus 320 ~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld~al~r 364 (741)
+++|+..+..+.+++..+.. .+.+||++||+++.+-..+.|
T Consensus 161 ~gLD~~~~~~i~~~i~~l~~----~g~tii~vtHdl~~~~~~~dr 201 (231)
T d1l7vc_ 161 NSLDVAQQSALDKILSALCQ----QGLAIVMSSHDLNHTLRHAHR 201 (231)
T ss_dssp TTCCHHHHHHHHHHHHHHHH----TTCEEEECCCCHHHHHHHCSB
T ss_pred CCCCHHHHHHHHHHHHHHHh----CCCEEEEEeCCHHHHHHHCCE
Confidence 99999999999999999865 478999999998876544444
No 33
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=99.68 E-value=2.5e-18 Score=172.44 Aligned_cols=156 Identities=13% Similarity=0.149 Sum_probs=106.7
Q ss_pred hhccC-CChHHHhhhCCCCCCC--ceEEcCCCChHHHHHHHHHHhcCCCceeeecccccc--------------------
Q psy11254 187 IELPL-LNPELFQRVGITPPKG--CLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVT-------------------- 243 (741)
Q Consensus 187 i~~~~-~~~~~~~~~~l~~~~G--vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~~-------------------- 243 (741)
|.+.| ..+.++++++|++++| ++|+||||||||||+++|+|.+.|..|++.......
T Consensus 7 vsf~Y~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~ 86 (242)
T d1mv5a_ 7 VDFAYDDSEQILRDISFEAQPNSIIAFAGPSGGGKSTIFSLLERFYQPTAGEITIDGQPIDNISLENWRSQIGFVSQDSA 86 (242)
T ss_dssp EEECSSSSSCSEEEEEEEECTTEEEEEECCTTSSHHHHHHHHTTSSCCSBSCEEETTEESTTTSCSCCTTTCCEECCSSC
T ss_pred EEEECCCCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHHhhCCCCCEEEECCEEeccccHHHHHhheEEEccccc
Confidence 34445 3356899999999999 889999999999999999999999877775421100
Q ss_pred -----hhhHHHHHhhh-hhhhccccccccc-----------ccCCCccchhhhhcchHHHHHHHHHHHHHhcCCeEEEec
Q psy11254 244 -----SKEDMAILMGN-QLKRRSTHHLEKT-----------YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMD 306 (741)
Q Consensus 244 -----~~~~~~~~~~~-~~~~~~~~~l~~~-----------~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllD 306 (741)
..+++...... .........++.. ++.....+....+|||++|++ ++++|+..+|+||++|
T Consensus 87 lf~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~LSGGqkQRv--~iARal~~~p~ililD 164 (242)
T d1mv5a_ 87 IMAGTIRENLTYGLEGDYTDEDLWQVLDLAFARSFVENMPDQLNTEVGERGVKISGGQRQRL--AIARAFLRNPKILMLD 164 (242)
T ss_dssp CCCEEHHHHTTSCTTSCSCHHHHHHHHHHHTCTTTTTSSTTGGGCEESTTSBCCCHHHHHHH--HHHHHHHHCCSEEEEE
T ss_pred cCCcchhhheecccccccchhhHHHHHHHHHhhhhhccCcccccccccCCCCCCCHHHHHHH--HHHHHHhcCCCEEEec
Confidence 00111000000 0000000011100 111111222346899999999 9999999999999999
Q ss_pred cccccccccCCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCC
Q psy11254 307 EIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLD 359 (741)
Q Consensus 307 Eid~l~~~~~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld 359 (741)
| |++++|+.....+.+.+..+.. +.++|++||+++.+.
T Consensus 165 E----------pts~LD~~~~~~i~~~l~~l~~-----~~Tvi~itH~l~~~~ 202 (242)
T d1mv5a_ 165 E----------ATASLDSESESMVQKALDSLMK-----GRTTLVIAHRLSTIV 202 (242)
T ss_dssp C----------CSCSSCSSSCCHHHHHHHHHHT-----TSEEEEECCSHHHHH
T ss_pred C----------CccccCHHHHHHHHHHHHHHcC-----CCEEEEEECCHHHHH
Confidence 9 9999999999999999988753 468999999987654
No 34
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=99.66 E-value=1e-15 Score=153.79 Aligned_cols=214 Identities=16% Similarity=0.191 Sum_probs=139.5
Q ss_pred CcccccChHHHHHHHHHHhhccCCChHHHhhhCCCCCCCceEEcCCCChHHHHHHHHHHhcCCCceeeecccccchhhHH
Q psy11254 169 TYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDM 248 (741)
Q Consensus 169 ~~~~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~GvlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~~~~~~~ 248 (741)
+|+++.|.+++++.+++++..+..+ -...++++|+|||||||||+|+++|.+++.++..+++.....
T Consensus 7 ~~~divGqe~~~~~l~~~i~~~~~~--------~~~~~~~L~~GPpGtGKT~lA~~la~~~~~~~~~~~~~~~~~----- 73 (238)
T d1in4a2 7 SLDEFIGQENVKKKLSLALEAAKMR--------GEVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVK----- 73 (238)
T ss_dssp SGGGCCSCHHHHHHHHHHHHHHHHH--------TCCCCCEEEESSTTSSHHHHHHHHHHHHTCCEEEEETTTCCS-----
T ss_pred cHHHcCChHHHHHHHHHHHHHHHhc--------CCCCCeEEEECCCCCcHHHHHHHHHhccCCCcccccCccccc-----
Confidence 7999999999999999998653211 123457999999999999999999999999988776532111
Q ss_pred HHHhhhhhhhcccccccccccCCCccchhhhhcchHHHHHHHHHHHHHhcCCeEEEeccccccccccCCCCCCccHHHHH
Q psy11254 249 AILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQR 328 (741)
Q Consensus 249 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~~~~~~p~~~lD~~~~~ 328 (741)
...+...+. .....+++++||+|.+.. ..+.
T Consensus 74 ------------------------------------~~~~~~~~~--~~~~~~~~~ide~~~~~~-----------~~~~ 104 (238)
T d1in4a2 74 ------------------------------------QGDMAAILT--SLERGDVLFIDEIHRLNK-----------AVEE 104 (238)
T ss_dssp ------------------------------------HHHHHHHHH--HCCTTCEEEEETGGGCCH-----------HHHH
T ss_pred ------------------------------------HHHHHHHHH--hhccCCchHHHHHHHhhh-----------HHHh
Confidence 111111222 234567999999998742 2233
Q ss_pred HHHHHHHhccCC-------------CCCCCeEEEEeeCCCCCCCccccCCCccceeeecCCCCHHHHHhccccchhccCC
Q psy11254 329 TLMELLNQMDGF-------------DSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395 (741)
Q Consensus 329 ~l~~lL~~l~~~-------------~~~~~v~vI~at~~~~~ld~al~r~gr~d~~i~~~~p~~~~r~~i~~~l~~~~~~ 395 (741)
.+...+...... ....++.+|++|+++..+++++++ ||+..+.++.|+..++..++....... .
T Consensus 105 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~at~~~~~~~~~~~~--r~~~~~~~~~~~~~~~~~~l~~~~~~~-~ 181 (238)
T d1in4a2 105 LLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTLVGATTRSGLLSSPLRS--RFGIILELDFYTVKELKEIIKRAASLM-D 181 (238)
T ss_dssp HHHHHHHTSCCCC---------------CCCEEEEEESCGGGSCHHHHT--TCSEEEECCCCCHHHHHHHHHHHHHHT-T
T ss_pred hcccceeeeeeeeeecCcccccccccCCCCeEEEEecCCCcccccccee--eeeEEEEecCCCHHHHHHHHHHhhhhc-c
Confidence 333333321100 012467899999999999999988 899999999999998877632221111 1
Q ss_pred CcccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccccchHhHHHHHHH
Q psy11254 396 IAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRK 449 (741)
Q Consensus 396 ~~~~~~~~~~~la~~t~g~~gadi~~l~~~A~~~a~~~~~~~i~~~d~~~a~~~ 449 (741)
... .+..+..++..+.| +.+.+.++++.+...+.......++.+...++++.
T Consensus 182 ~~~-~~~~l~~i~~~s~g-d~R~ai~~l~~~~~~~~~~~~~~it~~~~~~al~~ 233 (238)
T d1in4a2 182 VEI-EDAAAEMIAKRSRG-TPRIAIRLTKRVRDMLTVVKADRINTDIVLKTMEV 233 (238)
T ss_dssp CCB-CHHHHHHHHHTSTT-CHHHHHHHHHHHHHHHHHHTCSSBCHHHHHHHHHH
T ss_pred chh-hHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHh
Confidence 111 11124566666655 67777777777665555555556777776666554
No 35
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.65 E-value=1e-17 Score=171.61 Aligned_cols=151 Identities=17% Similarity=0.149 Sum_probs=100.8
Q ss_pred CChHHHhhhCCCCCCC--ceEEcCCCChHHHHHHHHHHhcCCCceeeeccccc------------chhhHHHHHhh---h
Q psy11254 192 LNPELFQRVGITPPKG--CLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV------------TSKEDMAILMG---N 254 (741)
Q Consensus 192 ~~~~~~~~~~l~~~~G--vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~------------~~~~~~~~~~~---~ 254 (741)
.+.+++++++|++++| ++|+||||||||||+++|+|.+.+..|.+.....+ +..+++.+... .
T Consensus 47 ~g~pvL~~isl~i~~Ge~vaivG~nGsGKSTLl~~i~Gl~~p~~G~I~~~g~i~~v~Q~~~l~~~tv~eni~~~~~~~~~ 126 (281)
T d1r0wa_ 47 VGNPVLKNINLNIEKGEMLAITGSTGSGKTSLLMLILGELEASEGIIKHSGRVSFCSQFSWIMPGTIKENIIFGVSYDEY 126 (281)
T ss_dssp TTCEEEEEEEEEECTTCEEEEEESTTSSHHHHHHHHHTSSCCSEEEEECCSCEEEECSSCCCCSEEHHHHHTTTSCCCHH
T ss_pred CCCeEEeCeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCcCCCcEEEECCEEEEEeccccccCceeeccccccccccch
Confidence 4457999999999999 88999999999999999999999988877543211 11112211000 0
Q ss_pred ---hhhhcccccccccccCC----CccchhhhhcchHHHHHHHHHHHHHhcCCeEEEeccccccccccCCCCCCccHHHH
Q psy11254 255 ---QLKRRSTHHLEKTYFPF----YSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327 (741)
Q Consensus 255 ---~~~~~~~~~l~~~~~~~----~~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~~~~~~p~~~lD~~~~ 327 (741)
...+..........++. ...+....+|||++|++ ++++|+..+|.||+||| |++++|+...
T Consensus 127 ~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~LSgGqkQRv--~lARaL~~~p~illLDE----------Pts~LD~~~~ 194 (281)
T d1r0wa_ 127 RYKSVVKACQLQQDITKFAEQDNTVLGEGGVTLSGGQRARI--SLARAVYKDADLYLLDS----------PFGYLDVFTE 194 (281)
T ss_dssp HHHHHHHHTTCHHHHTTSTTGGGCEECTTCTTSCHHHHHHH--HHHHHHHSCCSEEEEES----------CCCSSCHHHH
T ss_pred HHHHHHHHHHhHHHHHhchhhhhhhhhhhccCCCHHHHHHH--HHHHHHHhCccchhhcC----------ccccCCHHHH
Confidence 00000000000011111 11223346899999999 99999999999999999 9999999888
Q ss_pred HHHHHHHHhccCCCCCCCeEEEEeeCCCCCC
Q psy11254 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTL 358 (741)
Q Consensus 328 ~~l~~lL~~l~~~~~~~~v~vI~at~~~~~l 358 (741)
..+.+.+.. .. ..+.++|++||+++.+
T Consensus 195 ~~i~~~~~~--~~--~~~~tvi~itH~~~~l 221 (281)
T d1r0wa_ 195 EQVFESCVC--KL--MANKTRILVTSKMEHL 221 (281)
T ss_dssp HHHHHHCCC--CC--TTTSEEEEECSCHHHH
T ss_pred HHHHHHHHH--Hh--hCCCEEEEEechHHHH
Confidence 777664321 11 2356899999987654
No 36
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=99.58 E-value=4.4e-14 Score=141.69 Aligned_cols=215 Identities=22% Similarity=0.250 Sum_probs=132.2
Q ss_pred CCcccccChHHHHHHHHHHhhccCCChHHHhhhCCCCCCCceEEcCCCChHHHHHHHHHHhcCCCceeeecccccchhhH
Q psy11254 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKED 247 (741)
Q Consensus 168 ~~~~~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~GvlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~~~~~~ 247 (741)
.+|+|+.|.++++++++.++.....+ -..+++++|+|||||||||+|+++|++++.++..+++.....
T Consensus 6 ~~~ddivGq~~~~~~L~~~i~~~~~~--------~~~~~~~Ll~GPpG~GKTtla~~la~~~~~~~~~~~~~~~~~---- 73 (239)
T d1ixsb2 6 KTLDEYIGQERLKQKLRVYLEAAKAR--------KEPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEK---- 73 (239)
T ss_dssp CSGGGSCSCHHHHHHHHHHHHHHTTS--------SSCCCCEEEECCTTSCHHHHHHHHHHHHTCCEEEEETTTCCS----
T ss_pred CCHHHhCCHHHHHHHHHHHHHHHHhc--------CCCCCeEEEECCCCCCHHHHHHHHHHHhCCCeEeccCCcccc----
Confidence 47999999999999999998654322 123467999999999999999999999998887776532111
Q ss_pred HHHHhhhhhhhcccccccccccCCCccchhhhhcchHHHHHHHHHHHHHhcCCeEEEeccccccccccCCCCCCccHHHH
Q psy11254 248 MAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327 (741)
Q Consensus 248 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~~~~~~p~~~lD~~~~ 327 (741)
.+.... .+... ..+.+|+++||+|.+.. ..+
T Consensus 74 ---------------------------------~~~~~~----~~~~~-~~~~~i~~iDe~~~~~~-----------~~~ 104 (239)
T d1ixsb2 74 ---------------------------------PGDLAA----ILANS-LEEGDILFIDEIHRLSR-----------QAE 104 (239)
T ss_dssp ---------------------------------HHHHHH----HHHTT-CCTTCEEEEETGGGCCH-----------HHH
T ss_pred ---------------------------------chhhHH----HHHhh-ccCCCeeeeecccccch-----------hHH
Confidence 011111 12222 23456999999998632 233
Q ss_pred HHHHHHHHhc--cC-----------CCCCCCeEEEEeeCCCCCCCccccCCCccceeeecCCCCHHHHHhccccchhccC
Q psy11254 328 RTLMELLNQM--DG-----------FDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAG 394 (741)
Q Consensus 328 ~~l~~lL~~l--~~-----------~~~~~~v~vI~at~~~~~ld~al~r~gr~d~~i~~~~p~~~~r~~i~~~l~~~~~ 394 (741)
..+...+... +. .....++.+|++|+++....+..++ ++...+.+..|+.+.+..+........+
T Consensus 105 ~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 182 (239)
T d1ixsb2 105 EHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRPGLITAPLLS--RFGIVEHLEYYTPEELAQGVMRDARLLG 182 (239)
T ss_dssp HHHHHHHHHSEEEEECSCTTCCCEEEEECCCCEEEEEESCCSSCSCGGGG--GCSEEEECCCCCHHHHHHHHHHHHGGGC
T ss_pred HhhhhhhhhhhhhhhhccchhhhhcccCCCCEEEEeeccCcccccchhhc--ccceeeEeeccChhhhhHHHHHHHHHhC
Confidence 4444444321 00 0123467788999999988888777 6667788888888887766322211111
Q ss_pred CCcccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccccchHhHHHHHH
Q psy11254 395 PIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVR 448 (741)
Q Consensus 395 ~~~~~~~~~~~~la~~t~g~~gadi~~l~~~A~~~a~~~~~~~i~~~d~~~a~~ 448 (741)
... ..-....++..+.| ..+...++.+.+...+.......++.+...+++.
T Consensus 183 -i~~-~~~~l~~ia~~s~g-d~R~a~~~l~~~~~~a~~~~~~~It~~~~~~~l~ 233 (239)
T d1ixsb2 183 -VRI-TEEAALEIGRRSRG-TMRVAKRLFRRVRDFAQVAGEEVITRERALEALA 233 (239)
T ss_dssp -CCB-CHHHHHHHHHHTTS-SHHHHHHHHHHHHHHHTTSCCSCBCHHHHHHHHH
T ss_pred -Ccc-chHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHhCCCCcCHHHHHHHHh
Confidence 111 11124566777766 4455555555544444334445566666655554
No 37
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=99.56 E-value=2.1e-14 Score=144.04 Aligned_cols=183 Identities=22% Similarity=0.288 Sum_probs=123.1
Q ss_pred CCceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhhccccchHHHHHHHHHHHHHhcCCeEEEEcccccccCCCCCCC
Q psy11254 524 PKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEG 603 (741)
Q Consensus 524 ~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~~~~~g~s~~~i~~~f~~a~~~~p~Vl~iDE~d~~~~~r~~~~ 603 (741)
..+++|+||||||||++|+++|++++.+++.+++++.... ..+..++... ...+++|+||++.+..
T Consensus 35 ~~~~L~~GPpGtGKT~lA~~la~~~~~~~~~~~~~~~~~~------~~~~~~~~~~--~~~~~~~ide~~~~~~------ 100 (238)
T d1in4a2 35 LDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVKQ------GDMAAILTSL--ERGDVLFIDEIHRLNK------ 100 (238)
T ss_dssp CCCEEEESSTTSSHHHHHHHHHHHHTCCEEEEETTTCCSH------HHHHHHHHHC--CTTCEEEEETGGGCCH------
T ss_pred CCeEEEECCCCCcHHHHHHHHHhccCCCcccccCcccccH------HHHHHHHHhh--ccCCchHHHHHHHhhh------
Confidence 3479999999999999999999999999999888766432 2344455443 3358999999998632
Q ss_pred CcccHHHHHHHHHHHHHccCC-------------CCCCCeEEEEeeCCCCCCCccccCCCCcceEEEcCCCCHHHHHHHH
Q psy11254 604 TSADREIQRTLMELLNQMDGF-------------DSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEIL 670 (741)
Q Consensus 604 ~~~~~~~~~~l~~lL~~~~g~-------------~~~~~v~vi~tTn~~~~ld~al~rpgR~d~~i~~~~p~~~~r~~i~ 670 (741)
.....+...+...... ....++++|++||++..+++++.+ ||+..+.|+.|+.+++..++
T Consensus 101 -----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~at~~~~~~~~~~~~--r~~~~~~~~~~~~~~~~~~l 173 (238)
T d1in4a2 101 -----AVEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTLVGATTRSGLLSSPLRS--RFGIILELDFYTVKELKEII 173 (238)
T ss_dssp -----HHHHHHHHHHHTSCCCC---------------CCCEEEEEESCGGGSCHHHHT--TCSEEEECCCCCHHHHHHHH
T ss_pred -----HHHhhcccceeeeeeeeeecCcccccccccCCCCeEEEEecCCCcccccccee--eeeEEEEecCCCHHHHHHHH
Confidence 1223333333321110 012368899999999999999998 99999999999999999999
Q ss_pred HHhhcCccccCCCCcccccccccc-cccchHHHHHHHhhhhhh-hcCCCcccHHHHHHHHH
Q psy11254 671 KIHAGPIAKHGEIGDAATKWVLPF-TAGGFIYIATVSVIPELL-EDTSPKQTVKEILALLL 729 (741)
Q Consensus 671 ~~~~~~~~~~~~~~~~a~~~l~~~-~s~gf~~~a~~~~~~~l~-~~~~~~~s~~~i~~~l~ 729 (741)
+....... ..+++.+...+... ....+..++..+.+...+ .......+.+.+..++.
T Consensus 174 ~~~~~~~~--~~~~~~~l~~i~~~s~gd~R~ai~~l~~~~~~~~~~~~~~it~~~~~~al~ 232 (238)
T d1in4a2 174 KRAASLMD--VEIEDAAAEMIAKRSRGTPRIAIRLTKRVRDMLTVVKADRINTDIVLKTME 232 (238)
T ss_dssp HHHHHHTT--CCBCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTCSSBCHHHHHHHHH
T ss_pred HHhhhhcc--chhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHH
Confidence 98776432 23444444444333 334455555555444433 33444577776666553
No 38
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=99.48 E-value=2.7e-13 Score=135.81 Aligned_cols=185 Identities=22% Similarity=0.264 Sum_probs=123.1
Q ss_pred CCCceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhhccccchHHHHHHHHHHHHHhcCCeEEEEcccccccCCCCCC
Q psy11254 523 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSE 602 (741)
Q Consensus 523 ~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~~~~~g~s~~~i~~~f~~a~~~~p~Vl~iDE~d~~~~~r~~~ 602 (741)
++.++||+|||||||||+|+++|++++.++..++++..... +... ....... ...+|+|+||+|.+..
T Consensus 34 ~~~~~Ll~GPpG~GKTtla~~la~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~-~~~~i~~iDe~~~~~~----- 101 (239)
T d1ixsb2 34 PLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKP--GDLA----AILANSL-EEGDILFIDEIHRLSR----- 101 (239)
T ss_dssp CCCCEEEECCTTSCHHHHHHHHHHHHTCCEEEEETTTCCSH--HHHH----HHHHTTC-CTTCEEEEETGGGCCH-----
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhCCCeEeccCCccccc--hhhH----HHHHhhc-cCCCeeeeecccccch-----
Confidence 34679999999999999999999999999999988765332 2222 1222211 2357999999998632
Q ss_pred CCcccHHHHHHHHHHHHHc--cC-----------CCCCCCeEEEEeeCCCCCCCccccCCCCcceEEEcCCCCHHHHHHH
Q psy11254 603 GTSADREIQRTLMELLNQM--DG-----------FDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEI 669 (741)
Q Consensus 603 ~~~~~~~~~~~l~~lL~~~--~g-----------~~~~~~v~vi~tTn~~~~ld~al~rpgR~d~~i~~~~p~~~~r~~i 669 (741)
.....+...++.. +. .....++++|++||++...+++.+| |+...+.|+.|+.+++..|
T Consensus 102 ------~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~i 173 (239)
T d1ixsb2 102 ------QAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRPGLITAPLLS--RFGIVEHLEYYTPEELAQG 173 (239)
T ss_dssp ------HHHHHHHHHHHHSEEEEECSCTTCCCEEEEECCCCEEEEEESCCSSCSCGGGG--GCSEEEECCCCCHHHHHHH
T ss_pred ------hHHHhhhhhhhhhhhhhhhccchhhhhcccCCCCEEEEeeccCcccccchhhc--ccceeeEeeccChhhhhHH
Confidence 2233333333321 10 0123467789999999999999888 8999999999999999999
Q ss_pred HHHhhcCccccCCCCccccccccccc-ccchHHHHHHHhhhhhhh-cCCCcccHHHHHHHHH
Q psy11254 670 LKIHAGPIAKHGEIGDAATKWVLPFT-AGGFIYIATVSVIPELLE-DTSPKQTVKEILALLL 729 (741)
Q Consensus 670 ~~~~~~~~~~~~~~~~~a~~~l~~~~-s~gf~~~a~~~~~~~l~~-~~~~~~s~~~i~~~l~ 729 (741)
++..+.... ..++......+.... ...+..++..+.+...+. ......+.+.+..++.
T Consensus 174 ~~~~~~~~~--i~~~~~~l~~ia~~s~gd~R~a~~~l~~~~~~a~~~~~~~It~~~~~~~l~ 233 (239)
T d1ixsb2 174 VMRDARLLG--VRITEEAALEIGRRSRGTMRVAKRLFRRVRDFAQVAGEEVITRERALEALA 233 (239)
T ss_dssp HHHHHGGGC--CCBCHHHHHHHHHHTTSSHHHHHHHHHHHHHHHTTSCCSCBCHHHHHHHHH
T ss_pred HHHHHHHhC--CccchHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCCCcCHHHHHHHHh
Confidence 997776432 244444444443332 233555666666555544 3445678887777663
No 39
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.43 E-value=1e-12 Score=132.45 Aligned_cols=166 Identities=23% Similarity=0.350 Sum_probs=114.2
Q ss_pred cccccChHHHHHHHHHHhhccCCChHHHhhhCCCCCCCceEEcCCCChHHHHHHHHHHhcCCCceeeecccccchhhHHH
Q psy11254 170 YSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMA 249 (741)
Q Consensus 170 ~~~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~GvlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~~~~~~~~ 249 (741)
++.+.|.++.++++.+.+.... ..+++|+||||+|||++++.+|..+... .+...
T Consensus 17 ld~~igRd~Ei~~l~~iL~r~~-------------k~n~lLVG~~GvGKTalv~~la~ri~~~--~vp~~---------- 71 (268)
T d1r6bx2 17 IDPLIGREKELERAIQVLCRRR-------------KNNPLLVGESGVGKTAIAEGLAWRIVQG--DVPEV---------- 71 (268)
T ss_dssp SCCCCSCHHHHHHHHHHHTSSS-------------SCEEEEECCTTSSHHHHHHHHHHHHHHT--CSCGG----------
T ss_pred CCcccChHHHHHHHHHHHhcCc-------------cCCcEEECCCCCcHHHHHHHHHHHHHhC--Ccccc----------
Confidence 4567899999999988876422 2358899999999999999999865321 00000
Q ss_pred HHhhhhhhhcccccccccccCCCccchh--hhhcchHHHHHHHHHHHHHhcCCeEEEeccccccccccCCCCCCccHHHH
Q psy11254 250 ILMGNQLKRRSTHHLEKTYFPFYSSAIV--DKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327 (741)
Q Consensus 250 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~~~~~~p~~~lD~~~~ 327 (741)
. .....+..+...++ .+|.|+++.+++.++..+....+.|||+||++.|++.+.+.+++.|
T Consensus 72 ------l-------~~~~i~~l~~~~liag~~~~g~~e~r~~~i~~~~~~~~~iIlfiDeih~l~~~g~~~g~~~d---- 134 (268)
T d1r6bx2 72 ------M-------ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVD---- 134 (268)
T ss_dssp ------G-------TTCEEEECCCC---CCCCCSSCHHHHHHHHHHHHSSSSCEEEEETTTTTTTTSCCSSSCHHH----
T ss_pred ------c-------ccceeEEeeechHhccCccchhHHHHHHHHHHHhhccCCceEEecchHHHhcCCCCCCcccc----
Confidence 0 00000111123333 3688999999999999998888899999999999987654444322
Q ss_pred HHHHHHHHhccCCCCCCCeEEEEeeCC-----CCCCCccccCCCccceeeecCCCCHHHHHhc
Q psy11254 328 RTLMELLNQMDGFDSLGQVKMIMATNR-----PDTLDPALLRPGRLDRKIEIPLPNEQARLAH 385 (741)
Q Consensus 328 ~~l~~lL~~l~~~~~~~~v~vI~at~~-----~~~ld~al~r~gr~d~~i~~~~p~~~~r~~i 385 (741)
+..+| ..+.+++.+.||++|.. ...-|+++.| ||. .|.+..|+.++-..|
T Consensus 135 --~a~~L---kp~L~rg~i~vIgatT~eey~~~~e~d~al~r--rF~-~I~V~Eps~e~t~~I 189 (268)
T d1r6bx2 135 --AANLI---KPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR--RFQ-KIDITEPSIEETVQI 189 (268)
T ss_dssp --HHHHH---SSCSSSCCCEEEEEECHHHHHCCCCCTTSSGG--GEE-EEECCCCCHHHHHHH
T ss_pred --HHHHh---hHHHhCCCCeEEEeCCHHHHHHHHhhcHHHHh--hhc-ccccCCCCHHHHHHH
Confidence 23444 33445789999998752 2355788988 884 688999998888777
No 40
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=99.36 E-value=1.9e-13 Score=144.79 Aligned_cols=138 Identities=17% Similarity=0.152 Sum_probs=94.6
Q ss_pred CCCCCCceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhhccccchHHHHHHHHHHHHHhcCCeEEEEcccccccCCC
Q psy11254 520 GITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 599 (741)
Q Consensus 520 ~~~~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~~~~~g~s~~~i~~~f~~a~~~~p~Vl~iDE~d~~~~~r 599 (741)
|.+.+++++|+||||||||++|+++|+.++.+++++++++..+.+ .......+++.+||+++.....+
T Consensus 150 ~~~~~~~~~~~g~~~~gk~~~~~~~~~~~~~~~i~in~s~~rs~~------------~l~~~~~~~~~l~d~~~~~~~~~ 217 (362)
T d1svma_ 150 NIPKKRYWLFKGPIDSGKTTLAAALLELCGGKALNVNLPLDRLNF------------ELGVAIDQFLVVFEDVKGTGGES 217 (362)
T ss_dssp CCTTCCEEEEECSTTSSHHHHHHHHHHHHCCEEECCSSCTTTHHH------------HHGGGTTCSCEEETTCCCSTTTT
T ss_pred CCCCcCeEEEECCCCCCHHHHHHHHHHHcCCCEEEEECcchhhHH------------HHHhHHHHHHHHHHHHHHhhhhc
Confidence 667778999999999999999999999999999999988764443 22333445677888887765444
Q ss_pred CCCCCcccHHHHHHHHHHHHHccCCCCC------C------CeEEEEeeCCCCCCCccccCCCCcceEEEcCCCCHHHHH
Q psy11254 600 FSEGTSADREIQRTLMELLNQMDGFDSL------G------QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARL 667 (741)
Q Consensus 600 ~~~~~~~~~~~~~~l~~lL~~~~g~~~~------~------~v~vi~tTn~~~~ld~al~rpgR~d~~i~~~~p~~~~r~ 667 (741)
...... -...-+..+.+.+||..+. . ...+|+|||+ ++.+++||||||+.++|++|+...+.
T Consensus 218 ~~~~~~---~~~DeiD~l~~~~dg~~~~~~~~~~~~~~~~~~~p~i~ttN~---~~~~~~r~~Rf~~~i~~~~~~~~~~~ 291 (362)
T d1svma_ 218 RDLPSG---QGINNLDNLRDYLDGSVKVNLEKKHLNKRTQIFPPGIVTMNE---YSVPKTLQARFVKQIDFRPKDYLKHC 291 (362)
T ss_dssp TTCCCC---SHHHHHHTTHHHHHCSSCEEECCSSSCCEEECCCCEEEEECS---CCCCHHHHTTEEEEEECCCCHHHHHH
T ss_pred cCCCCe---EEEehHhhcccccCCcchhhhhhhhhchhhhccCCceeeccc---ccccccccccCceEEeecCCCcHHHH
Confidence 322111 1122344455566654211 0 1238899995 57788899999999999999877764
Q ss_pred -HHHHHhhc
Q psy11254 668 -EILKIHAG 675 (741)
Q Consensus 668 -~i~~~~~~ 675 (741)
.+++.++.
T Consensus 292 ~~~l~~i~~ 300 (362)
T d1svma_ 292 LERSEFLLE 300 (362)
T ss_dssp HHTCTHHHH
T ss_pred HHHHHHHhc
Confidence 34333333
No 41
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.35 E-value=5e-12 Score=127.37 Aligned_cols=159 Identities=23% Similarity=0.336 Sum_probs=115.4
Q ss_pred hcCCCCCCceEEEcCCCCChHHHHHHHHHHh----------CccEEEEechhhhc--cccchHHHHHHHHHHHHHhcCCe
Q psy11254 518 RVGITPPKGCLLYGPPGTGKTLLARAVASQL----------DANFLKVVSSAIVD--KYIGESARLIREMFNYARNHQPC 585 (741)
Q Consensus 518 ~~~~~~~~~~ll~G~~G~GKt~l~~~~a~~~----------~~~~~~v~~~~l~~--~~~g~s~~~i~~~f~~a~~~~p~ 585 (741)
-+......+++|+||||+|||+++..+|... +..++.++.+.++. +|.|+-+..++.++..+.....+
T Consensus 33 iL~r~~k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~~~~liag~~~~g~~e~r~~~i~~~~~~~~~i 112 (268)
T d1r6bx2 33 VLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS 112 (268)
T ss_dssp HHTSSSSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCCC---CCCCCSSCHHHHHHHHHHHHSSSSCE
T ss_pred HHhcCccCCcEEECCCCCcHHHHHHHHHHHHHhCCcccccccceeEEeeechHhccCccchhHHHHHHHHHHHhhccCCc
Confidence 3444556789999999999999999999764 45689999999886 78999999999999999888889
Q ss_pred EEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeC-----CCCCCCccccCCCCcceEEEcCC
Q psy11254 586 IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATN-----RPDTLDPALLRPGRLDRKIEIPL 660 (741)
Q Consensus 586 Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn-----~~~~ld~al~rpgR~d~~i~~~~ 660 (741)
||||||++.+++...+.+++. . +..+| ..+-..+.+-+|++|. ....-|+||.| ||.. |.++.
T Consensus 113 IlfiDeih~l~~~g~~~g~~~--d----~a~~L---kp~L~rg~i~vIgatT~eey~~~~e~d~al~r--rF~~-I~V~E 180 (268)
T d1r6bx2 113 ILFIDEIHTIIGAGAASGGQV--D----AANLI---KPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR--RFQK-IDITE 180 (268)
T ss_dssp EEEETTTTTTTTSCCSSSCHH--H----HHHHH---SSCSSSCCCEEEEEECHHHHHCCCCCTTSSGG--GEEE-EECCC
T ss_pred eEEecchHHHhcCCCCCCccc--c----HHHHh---hHHHhCCCCeEEEeCCHHHHHHHHhhcHHHHh--hhcc-cccCC
Confidence 999999999986654333221 1 22233 2233456788898885 34466899999 8875 88999
Q ss_pred CCHHHHHHHHHHhhcCccc--cCCCCcccc
Q psy11254 661 PNEQARLEILKIHAGPIAK--HGEIGDAAT 688 (741)
Q Consensus 661 p~~~~r~~i~~~~~~~~~~--~~~~~~~a~ 688 (741)
|+.++-.+|++.....+.. +..+++.++
T Consensus 181 ps~e~t~~IL~~~~~~~e~~h~v~~~~~al 210 (268)
T d1r6bx2 181 PSIEETVQIINGLKPKYEAHHDVRYTAKAV 210 (268)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTCCCCHHHH
T ss_pred CCHHHHHHHHHHhhHHHhccCCEEeChHHH
Confidence 9999999999875543322 234555544
No 42
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=99.33 E-value=9.4e-13 Score=139.29 Aligned_cols=252 Identities=11% Similarity=-0.004 Sum_probs=136.7
Q ss_pred hhhcCCCccCccccccccCCCCC-CCcc-----cccChHHHHHHHHHHhhccCCChHHHhhhCCCCCCCceEEcCCCChH
Q psy11254 145 IMRYLPREVDPLVYNMSHEDPGD-ITYS-----AIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGK 218 (741)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~GvlL~Gp~GtGK 218 (741)
+.+.+.++...++|........+ ..|. ...|+++++..+.+++.. .++ |.+.+++++|+|||||||
T Consensus 96 i~~~~~~~~~~~p~~~~~~~~~d~~~~~~il~~l~~~~~~~~~~i~~~l~~------~~~--~~~~~~~~~~~g~~~~gk 167 (362)
T d1svma_ 96 LTNRFNDLLDRMDIMFGSTGSADIEEWMAGVAWLHCLLPKMDSVVYDFLKC------MVY--NIPKKRYWLFKGPIDSGK 167 (362)
T ss_dssp HHHHHHHHHHHHHHHTSTTCCCCHHHHHHHHHHHTTTSTTHHHHHHHHHHH------HHH--CCTTCCEEEEECSTTSSH
T ss_pred HHHHHHHHHhhCccccccccccCHHHHHHHHHHHHhcccchHHHHHHHHHH------HHh--CCCCcCeEEEECCCCCCH
Confidence 44555556566666554433322 1221 236676777777666542 122 444456799999999999
Q ss_pred HHHHHHHHHhcCCCceeeecccccchhhHHHHHhhhhhhhcccccccccccCCCccchhhhhcchHHHHHHHHHHHHHhc
Q psy11254 219 TLLARAVASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNH 298 (741)
Q Consensus 219 TtL~r~ia~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~ 298 (741)
|++++++|+.++.++..++++.... ...+ +.... .... ++.... ....+...
T Consensus 168 ~~~~~~~~~~~~~~~i~in~s~~rs----~~~l-~~~~~-~~~~-------------l~d~~~---------~~~~~~~~ 219 (362)
T d1svma_ 168 TTLAAALLELCGGKALNVNLPLDRL----NFEL-GVAID-QFLV-------------VFEDVK---------GTGGESRD 219 (362)
T ss_dssp HHHHHHHHHHHCCEEECCSSCTTTH----HHHH-GGGTT-CSCE-------------EETTCC---------CSTTTTTT
T ss_pred HHHHHHHHHHcCCCEEEEECcchhh----HHHH-HhHHH-HHHH-------------HHHHHH---------HhhhhccC
Confidence 9999999999998888776532110 0000 00000 0000 000000 00011123
Q ss_pred CCeEEEeccccccccccCCC-CCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCCccccCCCccceeeecCCC
Q psy11254 299 QPCIIFMDEIDAIGGRRFSE-GTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLP 377 (741)
Q Consensus 299 ~P~ILllDEid~l~~~~~~p-~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld~al~r~gr~d~~i~~~~p 377 (741)
.|+++++||+|.|...+.+. ...+|.. ...........+|+|||+ ++.+..+++||+..+.+..|
T Consensus 220 ~~~~~~~DeiD~l~~~~dg~~~~~~~~~-----------~~~~~~~~~~p~i~ttN~---~~~~~~r~~Rf~~~i~~~~~ 285 (362)
T d1svma_ 220 LPSGQGINNLDNLRDYLDGSVKVNLEKK-----------HLNKRTQIFPPGIVTMNE---YSVPKTLQARFVKQIDFRPK 285 (362)
T ss_dssp CCCCSHHHHHHTTHHHHHCSSCEEECCS-----------SSCCEEECCCCEEEEECS---CCCCHHHHTTEEEEEECCCC
T ss_pred CCCeEEEehHhhcccccCCcchhhhhhh-----------hhchhhhccCCceeeccc---ccccccccccCceEEeecCC
Confidence 46677777777664433211 1111100 000000011138889995 45667789999999999888
Q ss_pred CHHHHHhccccchhccCCCcccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccccchHhHHHHHHHh
Q psy11254 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKV 450 (741)
Q Consensus 378 ~~~~r~~i~~~l~~~~~~~~~~~~~~~~~la~~t~g~~gadi~~l~~~A~~~a~~~~~~~i~~~d~~~a~~~~ 450 (741)
+...+.... +..+..... ...+.+.++..+.+++|+|+.+.++++.....+.....+....+......+
T Consensus 286 ~~~~~~~~~--l~~i~~~~~--l~~~~~~L~~li~~~s~~D~~~~i~~~~~~~~~~l~~ei~~~~~~~~k~~I 354 (362)
T d1svma_ 286 DYLKHCLER--SEFLLEKRI--IQSGIALLLMLIWYRPVAEFAQSIQSRIVEWKERLDKEFSLSVYQKMKFNV 354 (362)
T ss_dssp HHHHHHHHT--CTHHHHTTC--TTCHHHHHHHHHHHSCGGGSCGGGHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred CcHHHHHHH--HHHHhcccC--CCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhhhccHHHHHHHHHHH
Confidence 877664221 222222211 234567788888899999999999988776655555455555555444443
No 43
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=99.33 E-value=6.7e-12 Score=127.94 Aligned_cols=245 Identities=13% Similarity=0.108 Sum_probs=139.1
Q ss_pred ccccChHHHHHHHHHHhhccCCChHHHhhhCCC-CCCCceEEcCCCChHHHHHHHHHHhcCCCc---------eeeeccc
Q psy11254 171 SAIGGLSEQIRELREVIELPLLNPELFQRVGIT-PPKGCLLYGPPGTGKTLLARAVASQLDANF---------LKVVSSL 240 (741)
Q Consensus 171 ~~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~-~~~GvlL~Gp~GtGKTtL~r~ia~~l~~~~---------~~v~~~~ 240 (741)
+.+.|-+.++++|.+.+..+..+ +.+-. +...++|+||||||||+++++++..+.... ..+....
T Consensus 16 ~~~~~Re~e~~~l~~~l~~~~~~-----~~~~~~~~~~l~l~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 90 (287)
T d1w5sa2 16 PELRVRRGEAEALARIYLNRLLS-----GAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAFN 90 (287)
T ss_dssp SSCSSSCHHHHHHHHHHHHHHHT-----SSCBCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGG
T ss_pred CCCCCHHHHHHHHHHHHHHHHHc-----CCCCCCcceEEEeECCCCCCHHHHHHHHHHHHHhhcccccCCceeeeecccc
Confidence 45677788888888876432211 11111 111256789999999999999998874211 1111111
Q ss_pred ccchhhHHHHHhhhhhhhcccccccccccCCCccchhhhhcchHHHHHHHHHHHHH--hcCCeEEEeccccccccccCCC
Q psy11254 241 FVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYAR--NHQPCIIFMDEIDAIGGRRFSE 318 (741)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A~--~~~P~ILllDEid~l~~~~~~p 318 (741)
............... .....+.|.....+...+.... ...+.++++||+|.+....
T Consensus 91 ~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iide~d~l~~~~--- 148 (287)
T d1w5sa2 91 APNLYTILSLIVRQT-------------------GYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSP--- 148 (287)
T ss_dssp CCSHHHHHHHHHHHH-------------------TCCCCCTTCCHHHHHHHHHHHHHHHTCEEEEEEESTHHHHSCT---
T ss_pred ccchhhHHHHHhhhc-------------------ccccccccchHHHHHHHHHHHHHhccCccccceeEEEEecccc---
Confidence 111111111100000 0001122222222222333222 3456788999999997543
Q ss_pred CCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCC------ccccCCCccceeeecCCCCHHHHHhccccchhc
Q psy11254 319 GTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLD------PALLRPGRLDRKIEIPLPNEQARLAHTWPISIH 392 (741)
Q Consensus 319 ~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld------~al~r~gr~d~~i~~~~p~~~~r~~i~~~l~~~ 392 (741)
....+....+..+...+..........+|++++.++..+ +.+.+ |++..+.|+.|+..+..+| +...
T Consensus 149 --~~~~~~~~~l~~l~~~l~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~--r~~~~i~f~~y~~~el~~I---l~~r 221 (287)
T d1w5sa2 149 --RIAAEDLYTLLRVHEEIPSRDGVNRIGFLLVASDVRALSYMREKIPQVES--QIGFKLHLPAYKSRELYTI---LEQR 221 (287)
T ss_dssp --TSCHHHHHHHHTHHHHSCCTTSCCBEEEEEEEEETHHHHHHHHHCHHHHT--TCSEEEECCCCCHHHHHHH---HHHH
T ss_pred --ccchhHHHHHHHHHHhcchhhcccceeEEeecccHHHHHHHHhhccchhc--ccceeeeccCCcHHHHHHH---Hhhh
Confidence 223344555556666565555567788888888776543 34444 7788999999999998887 3322
Q ss_pred cCCCcccCCCC---HHHHHHhcCC-----CCHHHHHHHHHHHHHHHHhhhccccchHhHHHHHHH
Q psy11254 393 AGPIAKHGEID---YEAVVKLSDS-----FNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRK 449 (741)
Q Consensus 393 ~~~~~~~~~~~---~~~la~~t~g-----~~gadi~~l~~~A~~~a~~~~~~~i~~~d~~~a~~~ 449 (741)
.........++ +..+++.+.. -..+...++|++|...|.......++.+++.+|+.+
T Consensus 222 ~~~~~~~~~~~~~al~~ia~~~~~~~~~~gd~R~ai~~l~~a~~~A~~~~~~~It~~~V~~A~~e 286 (287)
T d1w5sa2 222 AELGLRDTVWEPRHLELISDVYGEDKGGDGSARRAIVALKMACEMAEAMGRDSLSEDLVRKAVSE 286 (287)
T ss_dssp HHHHBCTTSCCHHHHHHHHHHHCGGGTSCCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHH
T ss_pred HHHhhccCCCCHHHHHHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHhc
Confidence 11100111233 4455555532 246667788999998888888889999999888753
No 44
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.32 E-value=5.5e-12 Score=131.29 Aligned_cols=139 Identities=20% Similarity=0.306 Sum_probs=104.3
Q ss_pred ceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhhcc-----ccc----hHHHHH-HHHHHHHHhcCCeEEEEcccccc
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK-----YIG----ESARLI-REMFNYARNHQPCIIFMDEIDAI 595 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~~~-----~~g----~s~~~i-~~~f~~a~~~~p~Vl~iDE~d~~ 595 (741)
.++|+||+|+|||.+|+++|..++.+++.++++++... .+| ..+... ..+....+..+.+|++|||+|.
T Consensus 54 ~~lf~Gp~GvGKT~lak~la~~l~~~~i~~d~s~~~~~~~~~~l~g~~~gy~g~~~~~~l~~~~~~~~~~vvl~DeieK- 132 (315)
T d1r6bx3 54 SFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEK- 132 (315)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHTCEEEEEEGGGCSSSSCCSSSCCCCSCSHHHHHTTHHHHHHHHCSSEEEEEETGGG-
T ss_pred EEEEECCCcchhHHHHHHHHhhccCCeeEeccccccchhhhhhhcccCCCccccccCChhhHHHHhCccchhhhccccc-
Confidence 58999999999999999999999999999999876432 222 222221 2344445566679999999998
Q ss_pred cCCCCCCCCcccHHHHHHHHHHHHHccCCCC------CCCeEEEEeeCCCC-------------------------CCCc
Q psy11254 596 GGRRFSEGTSADREIQRTLMELLNQMDGFDS------LGQVKMIMATNRPD-------------------------TLDP 644 (741)
Q Consensus 596 ~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~------~~~v~vi~tTn~~~-------------------------~ld~ 644 (741)
+++.+...+.++|+.-.-.++ ..++++|+|||-.. .+.|
T Consensus 133 ----------a~~~V~~~lLqild~G~ltd~~Gr~vdf~n~iiI~Tsnig~~~i~~~~~~~~~~~~~~~~~~~l~~~f~p 202 (315)
T d1r6bx3 133 ----------AHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTP 202 (315)
T ss_dssp ----------SCHHHHHHHHHHHHHSEEEETTTEEEECTTEEEEEEECSSCC-----------------CHHHHHHHSCH
T ss_pred ----------ccchHhhhhHHhhccceecCCCCCccCccceEEEeccchhhHHHHhhhccchhhhhhHhHHHHHHHhcCH
Confidence 456778888888876432222 34788999999431 2566
Q ss_pred cccCCCCcceEEEcCCCCHHHHHHHHHHhhcCc
Q psy11254 645 ALLRPGRLDRKIEIPLPNEQARLEILKIHAGPI 677 (741)
Q Consensus 645 al~rpgR~d~~i~~~~p~~~~r~~i~~~~~~~~ 677 (741)
.|+. |||.++.|.+++.++..+|++.++..+
T Consensus 203 Efln--Rid~ii~f~~l~~~~~~~I~~~~l~~~ 233 (315)
T d1r6bx3 203 EFRN--RLDNIIWFDHLSTDVIHQVVDKFIVEL 233 (315)
T ss_dssp HHHT--TCSEEEECCCCCHHHHHHHHHHHHHHH
T ss_pred HHHh--hhhhhhcccchhhhHHHHHHHHHHHHH
Confidence 6665 999999999999999999988877643
No 45
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.31 E-value=3.7e-12 Score=126.66 Aligned_cols=175 Identities=21% Similarity=0.223 Sum_probs=112.6
Q ss_pred ceEEEcCCCCChHHHHHHHHHHhC-----ccEEEEechhhhccccchHHHHHHHHHH--HHHhcCCeEEEEcccccccCC
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQLD-----ANFLKVVSSAIVDKYIGESARLIREMFN--YARNHQPCIIFMDEIDAIGGR 598 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~~-----~~~~~v~~~~l~~~~~g~s~~~i~~~f~--~a~~~~p~Vl~iDE~d~~~~~ 598 (741)
+++|+||||+||||+|+++|+++. .+++.+++++..+..... ........ ......+.|+++||+|.+..
T Consensus 47 ~lll~Gp~G~GKTtla~~iak~l~~~~~~~~~~e~n~s~~~~~~~~~--~~~~~~~~~~~~~~~~~~iilide~d~~~~- 123 (231)
T d1iqpa2 47 HLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERGINVIR--EKVKEFARTKPIGGASFKIIFLDEADALTQ- 123 (231)
T ss_dssp EEEEESCTTSSHHHHHHHHHHHHHGGGHHHHEEEEETTCHHHHHTTH--HHHHHHHHSCCGGGCSCEEEEEETGGGSCH-
T ss_pred eEEEECCCCCcHHHHHHHHHHHHHhcccCCCeeEEecCcccchhHHH--HHHHHHHhhhhccCCCceEEeehhhhhcch-
Confidence 589999999999999999999874 457778776543321111 11111111 11234578999999998531
Q ss_pred CCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCCccccCCCCcceEEEcCCCCHHHHHHHHHHhhcCcc
Q psy11254 599 RFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIA 678 (741)
Q Consensus 599 r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld~al~rpgR~d~~i~~~~p~~~~r~~i~~~~~~~~~ 678 (741)
.....+..++.. ....+.+|++||.+..+++++.+ |+. .+.|++|+..+...+++..+....
T Consensus 124 ----------~~~~~ll~~l~~-----~~~~~~~i~~~n~~~~i~~~l~s--R~~-~i~~~~~~~~~~~~~l~~~~~~e~ 185 (231)
T d1iqpa2 124 ----------DAQQALRRTMEM-----FSSNVRFILSCNYSSKIIEPIQS--RCA-IFRFRPLRDEDIAKRLRYIAENEG 185 (231)
T ss_dssp ----------HHHHHHHHHHHH-----TTTTEEEEEEESCGGGSCHHHHH--TEE-EEECCCCCHHHHHHHHHHHHHTTT
T ss_pred ----------hHHHHHhhhccc-----CCcceEEEeccCChhhchHhHhC--ccc-cccccccchhhHHHHHHHHHHHhC
Confidence 223444444443 23468899999999999999987 874 599999999999999998876432
Q ss_pred ccCCCCccccccccccc-ccchHHHHHHHhhhhhhhcCCCcccHHHHHHH
Q psy11254 679 KHGEIGDAATKWVLPFT-AGGFIYIATVSVIPELLEDTSPKQTVKEILAL 727 (741)
Q Consensus 679 ~~~~~~~~a~~~l~~~~-s~gf~~~a~~~~~~~l~~~~~~~~s~~~i~~~ 727 (741)
..+++.++..++... .+.+..++..+. +...+...+.+.|..+
T Consensus 186 --i~i~~~~l~~I~~~~~gdiR~ai~~Lq~----~~~~~~~it~e~v~~v 229 (231)
T d1iqpa2 186 --LELTEEGLQAILYIAEGDMRRAINILQA----AAALDKKITDENVFMV 229 (231)
T ss_dssp --CEECHHHHHHHHHHHTTCHHHHHHHHHH----HHTTCSEECHHHHHHH
T ss_pred --CCCCHHHHHHHHHHcCCCHHHHHHHHHH----HHHcCCCcCHHHHHhh
Confidence 345666655554332 222333333322 2233556777777554
No 46
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.30 E-value=1.5e-12 Score=135.37 Aligned_cols=137 Identities=23% Similarity=0.425 Sum_probs=101.7
Q ss_pred ceEEEcCCCCChHHHHHHHHHHh---CccEEEEechhhhc------------cccchHHHHHHHHHHHHHhcCCeEEEEc
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQL---DANFLKVVSSAIVD------------KYIGESARLIREMFNYARNHQPCIIFMD 590 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~---~~~~~~v~~~~l~~------------~~~g~s~~~i~~~f~~a~~~~p~Vl~iD 590 (741)
.++|+||+|+|||.+|+.+|..+ +.+++.++++++.. .|+|..+ -..+.+..+..+.||+|||
T Consensus 55 ~~lf~Gp~G~GKt~lak~la~~l~~~~~~~~~~~~~~~~~~~~~~~L~g~~~gyvG~~~--~~~l~~~~~~~p~~Vvl~D 132 (315)
T d1qvra3 55 SFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPPGYVGYEE--GGQLTEAVRRRPYSVILFD 132 (315)
T ss_dssp EEEEBSCSSSSHHHHHHHHHHHHHSSGGGEEEECTTTCCSSGGGGGC----------------CHHHHHHHCSSEEEEES
T ss_pred EEEEECCCcchHHHHHHHHHHHhcCCCcceEEEeccccccchhhhhhcCCCCCCcCccc--CChHHHHHHhCCCcEEEEe
Confidence 57899999999999999999998 67899998887653 2344322 1234455556667999999
Q ss_pred ccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCC------CCCeEEEEeeCC--------------------------
Q psy11254 591 EIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDS------LGQVKMIMATNR-------------------------- 638 (741)
Q Consensus 591 E~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~------~~~v~vi~tTn~-------------------------- 638 (741)
|+|. .++.+...+.++++.-.-.+. ..++++|+|||-
T Consensus 133 EieK-----------~~~~v~~~ll~~l~~g~~~~~~gr~v~~~~~i~i~tsnlG~~~i~~~~~~~~~~~~~~~~~~~~l 201 (315)
T d1qvra3 133 EIEK-----------AHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVL 201 (315)
T ss_dssp SGGG-----------SCHHHHHHHHHHHTTTEECCSSSCCEECTTEEEEEECCTTHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred hHhh-----------cCHHHHHHHHHHhccCceeCCCCcEecCcceEEEEecccChHHHhhhcccccchhhhhHHHHHHH
Confidence 9998 456677888888775432222 247899999994
Q ss_pred CCCCCccccCCCCcceEEEcCCCCHHHHHHHHHHhhcCc
Q psy11254 639 PDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPI 677 (741)
Q Consensus 639 ~~~ld~al~rpgR~d~~i~~~~p~~~~r~~i~~~~~~~~ 677 (741)
...+.|.|+. |||.++.|.+.+.++..+|+...+..+
T Consensus 202 ~~~f~pEfln--Rid~Ii~F~~L~~~~~~~I~~~~l~~l 238 (315)
T d1qvra3 202 QQHFRPEFLN--RLDEIVVFRPLTKEQIRQIVEIQLSYL 238 (315)
T ss_dssp HTTSCHHHHH--TCSBCCBCCCCCHHHHHHHHHHHHHHH
T ss_pred HhhcCHHHHh--cCCeeeeccchhhhhhHHHHHHHHHHH
Confidence 3568888887 999999999999999999998776644
No 47
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=99.28 E-value=6.8e-12 Score=127.93 Aligned_cols=196 Identities=13% Similarity=0.132 Sum_probs=125.9
Q ss_pred eEEEcCCCCChHHHHHHHHHHhC---------ccEEEEechhhhc----------------cccchHHHH-HHHHHHHHH
Q psy11254 527 CLLYGPPGTGKTLLARAVASQLD---------ANFLKVVSSAIVD----------------KYIGESARL-IREMFNYAR 580 (741)
Q Consensus 527 ~ll~G~~G~GKt~l~~~~a~~~~---------~~~~~v~~~~l~~----------------~~~g~s~~~-i~~~f~~a~ 580 (741)
++|+||||||||++++++++.+. ..+..++...... .+.|.+... ...++....
T Consensus 49 l~l~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 128 (287)
T d1w5sa2 49 YGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAFNAPNLYTILSLIVRQTGYPIQVRGAPALDILKALVDNLY 128 (287)
T ss_dssp EECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCSHHHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHH
T ss_pred EEeECCCCCCHHHHHHHHHHHHHhhcccccCCceeeeeccccccchhhHHHHHhhhcccccccccchHHHHHHHHHHHHH
Confidence 56789999999999999998873 2233333222111 122233322 333333333
Q ss_pred -hcCCeEEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCC------CccccCCCCcc
Q psy11254 581 -NHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTL------DPALLRPGRLD 653 (741)
Q Consensus 581 -~~~p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~l------d~al~rpgR~d 653 (741)
...+.++++||+|.+..... ...+....+..+++.+........+.+|+.+|.++.. ++++.+ ||+
T Consensus 129 ~~~~~~~~iide~d~l~~~~~-----~~~~~~~~l~~l~~~l~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~--r~~ 201 (287)
T d1w5sa2 129 VENHYLLVILDEFQSMLSSPR-----IAAEDLYTLLRVHEEIPSRDGVNRIGFLLVASDVRALSYMREKIPQVES--QIG 201 (287)
T ss_dssp HHTCEEEEEEESTHHHHSCTT-----SCHHHHHHHHTHHHHSCCTTSCCBEEEEEEEEETHHHHHHHHHCHHHHT--TCS
T ss_pred hccCccccceeEEEEeccccc-----cchhHHHHHHHHHHhcchhhcccceeEEeecccHHHHHHHHhhccchhc--ccc
Confidence 23467889999999875542 2234455666777777776667778888888776543 356666 899
Q ss_pred eEEEcCCCCHHHHHHHHHHhhcCccccCCCCcccccccccc-------cccchHHHHHHHhhhhhhh-cCCCcccHHHHH
Q psy11254 654 RKIEIPLPNEQARLEILKIHAGPIAKHGEIGDAATKWVLPF-------TAGGFIYIATVSVIPELLE-DTSPKQTVKEIL 725 (741)
Q Consensus 654 ~~i~~~~p~~~~r~~i~~~~~~~~~~~~~~~~~a~~~l~~~-------~s~gf~~~a~~~~~~~l~~-~~~~~~s~~~i~ 725 (741)
..++|++|+.++..+|++..+........+++.++..++.. ....+..+.+...+-.+++ +....++.+|+.
T Consensus 202 ~~i~f~~y~~~el~~Il~~r~~~~~~~~~~~~~al~~ia~~~~~~~~~~gd~R~ai~~l~~a~~~A~~~~~~~It~~~V~ 281 (287)
T d1w5sa2 202 FKLHLPAYKSRELYTILEQRAELGLRDTVWEPRHLELISDVYGEDKGGDGSARRAIVALKMACEMAEAMGRDSLSEDLVR 281 (287)
T ss_dssp EEEECCCCCHHHHHHHHHHHHHHHBCTTSCCHHHHHHHHHHHCGGGTSCCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHH
T ss_pred eeeeccCCcHHHHHHHHhhhHHHhhccCCCCHHHHHHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHH
Confidence 99999999999999999988764333345666665554432 2234445555554444554 456789999998
Q ss_pred HHHH
Q psy11254 726 ALLL 729 (741)
Q Consensus 726 ~~l~ 729 (741)
.++.
T Consensus 282 ~A~~ 285 (287)
T d1w5sa2 282 KAVS 285 (287)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7764
No 48
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.27 E-value=1.1e-11 Score=124.60 Aligned_cols=209 Identities=19% Similarity=0.263 Sum_probs=108.6
Q ss_pred CCcccccChHHHHHHHHHHhhccC-CChHHH---hhhCCCCCCCceEEcCCCChHHHHHHHHHHhcCCCceeeecccccc
Q psy11254 168 ITYSAIGGLSEQIRELREVIELPL-LNPELF---QRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVT 243 (741)
Q Consensus 168 ~~~~~i~Gl~~~k~~i~e~i~~~~-~~~~~~---~~~~l~~~~GvlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~~ 243 (741)
-+++++.|.++.+++|++.+..-. ..+..+ ...+....++++|+|||||||||+++++|+.++.++..+..+....
T Consensus 11 ~~~~dlig~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a~~la~~~~~~~~~~~~~~~~~ 90 (253)
T d1sxja2 11 TNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQNASDVRS 90 (253)
T ss_dssp SSGGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHTTCEEEEECTTSCCC
T ss_pred CCHHHhcCCHHHHHHHHHHHHhhhhcchhhhhhhcccCCCCCceEEEECCCCCCHHHHHHHHHHHHHhhhhccccccchh
Confidence 369999999999999999886311 001111 1112233445899999999999999999999998887776543322
Q ss_pred hhhHHHHHhhhhhhhcccccccccccCCCccchhhhhcchHHHHHHHHHHHHHhcCCeEEEeccccccccccCCCCCCcc
Q psy11254 244 SKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSAD 323 (741)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~~~~~~p~~~lD 323 (741)
.. .+..... ....... .... .... .........+.++++||+|.+....
T Consensus 91 ~~-~~~~~~~--------~~~~~~~-------~~~~-~~~~------~~~~~~~~~~~vi~ide~~~~~~~~-------- 139 (253)
T d1sxja2 91 KT-LLNAGVK--------NALDNMS-------VVGY-FKHN------EEAQNLNGKHFVIIMDEVDGMSGGD-------- 139 (253)
T ss_dssp HH-HHHHTGG--------GGTTBCC-------STTT-TTC----------CCSSTTSEEEEECSGGGCCTTS--------
T ss_pred hH-HHHHHHH--------HHhhcch-------hhhh-hhhh------hhcccccccceEEEeeeccccccch--------
Confidence 11 1100000 0000000 0000 0000 0001122456799999999875422
Q ss_pred HHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCCccccCCCccceeeecCCCCHHHHHhccccchhccCCCcccCCCC
Q psy11254 324 REIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEID 403 (741)
Q Consensus 324 ~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld~al~r~gr~d~~i~~~~p~~~~r~~i~~~l~~~~~~~~~~~~~~ 403 (741)
......+.++..... ..+.++++++....+++ + + ++...+.|+.|+..++..++..+... ..... .+-.
T Consensus 140 ~~~~~~~~~~~~~~~-----~~ii~i~~~~~~~~~~~-l-~--~~~~~i~f~~~~~~~i~~~l~~i~~~-e~i~i-~~~~ 208 (253)
T d1sxja2 140 RGGVGQLAQFCRKTS-----TPLILICNERNLPKMRP-F-D--RVCLDIQFRRPDANSIKSRLMTIAIR-EKFKL-DPNV 208 (253)
T ss_dssp TTHHHHHHHHHHHCS-----SCEEEEESCTTSSTTGG-G-T--TTSEEEECCCCCHHHHHHHHHHHHHH-HTCCC-CTTH
T ss_pred hhhhHHHhhhhcccc-----ccccccccccccccccc-c-c--ceeeeeeccccchhHHHHHHHHHHHH-hCCCC-CHHH
Confidence 112233334333222 22333333333334543 3 2 55788999999998887763322111 11111 1223
Q ss_pred HHHHHHhcCCCCHHHHHHH
Q psy11254 404 YEAVVKLSDSFNGADLRNV 422 (741)
Q Consensus 404 ~~~la~~t~g~~gadi~~l 422 (741)
+..++..+.| |++.+
T Consensus 209 l~~i~~~s~G----DiR~a 223 (253)
T d1sxja2 209 IDRLIQTTRG----DIRQV 223 (253)
T ss_dssp HHHHHHHTTT----CHHHH
T ss_pred HHHHHHhCCC----cHHHH
Confidence 5667776654 55444
No 49
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=99.26 E-value=1.9e-11 Score=123.73 Aligned_cols=244 Identities=12% Similarity=0.099 Sum_probs=132.9
Q ss_pred CCcccccChHHHHHHHHHHhhccCCChHHHhhhCCCCCCCceEEcCCCChHHHHHHHHHHhcCCCce----eeecccccc
Q psy11254 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFL----KVVSSLFVT 243 (741)
Q Consensus 168 ~~~~~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~GvlL~Gp~GtGKTtL~r~ia~~l~~~~~----~v~~~~~~~ 243 (741)
...+.+.|-+++++.|.+.+.-. +++-+ ..+.+++|+|||||||||++|+++..+..... .+.......
T Consensus 13 y~p~~l~~Re~ei~~l~~~l~~~------l~~~~-~~~~~lll~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~ 85 (276)
T d1fnna2 13 YVPKRLPHREQQLQQLDILLGNW------LRNPG-HHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRN 85 (276)
T ss_dssp CCCSCCTTCHHHHHHHHHHHHHH------HHSTT-SSCCEEEEECCTTSSHHHHHHHHHHHHTTSCCCEEEEEETTTCCS
T ss_pred CCCCCCCCHHHHHHHHHHHHHHH------HhCCC-CCCCceEEECCCCCCHHHHHHHHHHHHhcccCCcEEEecchhhhh
Confidence 34456889999999999988632 22212 34556999999999999999999998854322 111111111
Q ss_pred hhhHHHHHhhhhhhhcccccccccccCCCccchhhhhcchHHHHH-HHHHHHH-HhcCCeEEEeccccccccccCCCCCC
Q psy11254 244 SKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLI-REMFNYA-RNHQPCIIFMDEIDAIGGRRFSEGTS 321 (741)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v-~~~~~~A-~~~~P~ILllDEid~l~~~~~~p~~~ 321 (741)
....+...... .+. .....+.....+ ....... ....+.++++|++|.+..
T Consensus 86 ~~~~~~~~~~~------------~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-------- 138 (276)
T d1fnna2 86 FTAIIGEIARS------------LNI-------PFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAP-------- 138 (276)
T ss_dssp HHHHHHHHHHH------------TTC-------CCCSSCCCHHHHHHHHHHHHHHTTCCEEEEEETGGGSCH--------
T ss_pred hhhhhhhhHHh------------hhh-------hhhhhccchhHHHHHHHHHHhhcccccccchhHHHHhhh--------
Confidence 11111111000 000 001111111112 1122222 234577888999876532
Q ss_pred ccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCC---CCCccccCCCcc-ceeeecCCCCHHHHHhccccchhccCCCc
Q psy11254 322 ADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPD---TLDPALLRPGRL-DRKIEIPLPNEQARLAHTWPISIHAGPIA 397 (741)
Q Consensus 322 lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~---~ld~al~r~gr~-d~~i~~~~p~~~~r~~i~~~l~~~~~~~~ 397 (741)
.....+..++..+.. .....+.+|+++++.+ .+++.+.+ |+ ...+.|++|+..+..+|+...........
T Consensus 139 ---~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~--r~~~~~i~~~~~~~~e~~~il~~r~~~~~~~~ 212 (276)
T d1fnna2 139 ---DILSTFIRLGQEADK-LGAFRIALVIVGHNDAVLNNLDPSTRG--IMGKYVIRFSPYTKDQIFDILLDRAKAGLAEG 212 (276)
T ss_dssp ---HHHHHHHHHTTCHHH-HSSCCEEEEEEESSTHHHHTSCHHHHH--HHTTCEEECCCCBHHHHHHHHHHHHHHHBCTT
T ss_pred ---hhhhhHHHHHhcccc-ccccceEEeecCCchhhhhhcchhhhh--hhcchhccccchhHHHHHHHHHHHHHHhcccc
Confidence 112222222222211 1235678888888754 45555554 43 35688999999998877322111101111
Q ss_pred ccCCCCHHHHHHhcC------CC--CHHHHHHHHHHHHHHHHhhhccccchHhHHHHHHHhc
Q psy11254 398 KHGEIDYEAVVKLSD------SF--NGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVS 451 (741)
Q Consensus 398 ~~~~~~~~~la~~t~------g~--~gadi~~l~~~A~~~a~~~~~~~i~~~d~~~a~~~~~ 451 (741)
...+.....+++.+. .+ +.+.+.++|+.|...|....+..++.+|+.+|.+++.
T Consensus 213 ~~~~~~l~~ia~~~~~~~~~~~~~G~~R~a~~ll~~a~~~A~~~~~~~I~~edv~~A~~~~~ 274 (276)
T d1fnna2 213 SYSEDILQMIADITGAQTPLDTNRGDARLAIDILYRSAYAAQQNGRKHIAPEDVRKSSKEVL 274 (276)
T ss_dssp SSCHHHHHHHHHHHSBSSTTCTTSCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHS
T ss_pred cccHHHHHHHHHHhhhhhhhhhcCCCHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHh
Confidence 011111344454432 11 4567778899999888888888999999999887653
No 50
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.25 E-value=2.7e-11 Score=121.04 Aligned_cols=176 Identities=18% Similarity=0.276 Sum_probs=115.1
Q ss_pred CCceEEEcCCCCChHHHHHHHHHHhCcc------------------------EEEEechhhhccccchHHHHHHHHHHHH
Q psy11254 524 PKGCLLYGPPGTGKTLLARAVASQLDAN------------------------FLKVVSSAIVDKYIGESARLIREMFNYA 579 (741)
Q Consensus 524 ~~~~ll~G~~G~GKt~l~~~~a~~~~~~------------------------~~~v~~~~l~~~~~g~s~~~i~~~f~~a 579 (741)
+..++|+||||+|||++|++++..+..+ ++.++.++.. ....++.+++.+
T Consensus 34 ~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~------~i~~ir~~~~~~ 107 (239)
T d1njfa_ 34 HHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRT------KVEDTRDLLDNV 107 (239)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHHHCTTCSCSSCCSCSHHHHHHHHTCCTTEEEEETTCSS------SHHHHHHHHHSC
T ss_pred CeeEEEECCCCCcHHHHHHHHHHHhcCccccccCccccchHHHHHHcCCCCeEEEecchhcC------CHHHHHHHHHHH
Confidence 4568999999999999999999887432 3333332211 123456666665
Q ss_pred Hhc----CCeEEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCCccccCCCCcceE
Q psy11254 580 RNH----QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 655 (741)
Q Consensus 580 ~~~----~p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld~al~rpgR~d~~ 655 (741)
... ...|++|||+|.+. ... .+.|+..|+ ...+++.+|++||.++.+.+++.+ |+ ..
T Consensus 108 ~~~~~~~~~kviiIde~d~l~-----------~~~---q~~Llk~lE--~~~~~~~~il~tn~~~~i~~~i~S--Rc-~~ 168 (239)
T d1njfa_ 108 QYAPARGRFKVYLIDEVHMLS-----------RHS---FNALLKTLE--EPPEHVKFLLATTDPQKLPVTILS--RC-LQ 168 (239)
T ss_dssp CCSCSSSSSEEEEEETGGGSC-----------HHH---HHHHHHHHH--SCCTTEEEEEEESCGGGSCHHHHT--TS-EE
T ss_pred HhccccCCCEEEEEECcccCC-----------HHH---HHHHHHHHh--cCCCCeEEEEEcCCccccChhHhh--hh-cc
Confidence 432 34599999999862 222 334555555 334578899999999999999987 88 67
Q ss_pred EEcCCCCHHHHHHHHHHhhcCccccCCCCcccccccccccccchHHHHHHHhhhhhhhcCCCcccHHHHHHHH
Q psy11254 656 IEIPLPNEQARLEILKIHAGPIAKHGEIGDAATKWVLPFTAGGFIYIATVSVIPELLEDTSPKQTVKEILALL 728 (741)
Q Consensus 656 i~~~~p~~~~r~~i~~~~~~~~~~~~~~~~~a~~~l~~~~s~gf~~~a~~~~~~~l~~~~~~~~s~~~i~~~l 728 (741)
+.|++|+.++..+++....... +..+++.++..+.. .++|....+.. .+...+.......+.+++..++
T Consensus 169 i~~~~~~~~~i~~~l~~i~~~e--~~~~~~~~l~~i~~-~s~Gd~R~ain-~l~~~~~~~~~~I~~~~v~~~l 237 (239)
T d1njfa_ 169 FHLKALDVEQIRHQLEHILNEE--HIAHEPRALQLLAR-AAEGSLRDALS-LTDQAIASGDGQVSTQAVSAML 237 (239)
T ss_dssp EECCCCCHHHHHHHHHHHHHHH--TCCBCHHHHHHHHH-HTTTCHHHHHH-HHHHHHHHTTTSBCHHHHHHHH
T ss_pred cccccCcHHHhhhHHHHHHhhh--ccCCCHHHHHHHHH-HcCCCHHHHHH-HHHHHHHhCCCCcCHHHHHHHh
Confidence 9999999999888877665532 23455555555443 33443333332 2333444445578888887776
No 51
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.25 E-value=3.1e-12 Score=121.98 Aligned_cols=155 Identities=26% Similarity=0.406 Sum_probs=105.2
Q ss_pred cccccChHHHHHHHHHHhhccCCChHHHhhhCCCCCCCceEEcCCCChHHHHHHHHHHhcCC----------Cceeeecc
Q psy11254 170 YSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDA----------NFLKVVSS 239 (741)
Q Consensus 170 ~~~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~GvlL~Gp~GtGKTtL~r~ia~~l~~----------~~~~v~~~ 239 (741)
++.+.|-++.++++.+.+..... .+++|+||||+|||++++.+|..+.. .+..++.
T Consensus 21 ld~~igRd~Ei~~l~~iL~r~~k-------------~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~ld~- 86 (195)
T d1jbka_ 21 LDPVIGRDEEIRRTIQVLQRRTK-------------NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDM- 86 (195)
T ss_dssp SCCCCSCHHHHHHHHHHHTSSSS-------------CEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEECH-
T ss_pred CCCCcCcHHHHHHHHHHHhccCC-------------CCeEEEecCCcccHHHHHHHHHHHHhCCCCHHHcCceEEEeeH-
Confidence 45577899999999888764322 35789999999999999999986632 1222211
Q ss_pred cccchhhHHHHHhhhhhhhcccccccccccCCCccchh--hhhcchHHHHHHHHHHHHHhcC-CeEEEeccccccccccC
Q psy11254 240 LFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIV--DKYIGESARLIREMFNYARNHQ-PCIIFMDEIDAIGGRRF 316 (741)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~G~~~~~v~~~~~~A~~~~-P~ILllDEid~l~~~~~ 316 (741)
..++ .+|.|+++.+++.++..+...+ +.||||||++.+.+...
T Consensus 87 ----------------------------------~~LiAg~~~rG~~E~rl~~il~e~~~~~~~iILfIDeih~l~~~g~ 132 (195)
T d1jbka_ 87 ----------------------------------GALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK 132 (195)
T ss_dssp ----------------------------------HHHHTTTCSHHHHHHHHHHHHHHHHHSTTTEEEEEETGGGGTT---
T ss_pred ----------------------------------HHHhccCCccHHHHHHHHHHHHHHhcCCCcEEEEcchHHHHhcCCC
Confidence 2232 3577899999999998876655 57999999999987665
Q ss_pred CCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCC-----CCCccccCCCccceeeecCCCCHHHHHhc
Q psy11254 317 SEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPD-----TLDPALLRPGRLDRKIEIPLPNEQARLAH 385 (741)
Q Consensus 317 ~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~-----~ld~al~r~gr~d~~i~~~~p~~~~r~~i 385 (741)
+.+ +.|. ...|.-.|. ++.+.||++|..-+ .-|+++.| ||. .|.+..|+.++-..|
T Consensus 133 ~~g-~~d~--~~~Lkp~L~-------rg~l~~IgatT~eey~~~~e~d~aL~r--rF~-~I~V~Ep~~e~t~~I 193 (195)
T d1jbka_ 133 ADG-AMDA--GNMLKPALA-------RGELHCVGATTLDEYRQYIEKDAALER--RFQ-KVFVAEPSVEDTIAI 193 (195)
T ss_dssp ----CCCC--HHHHHHHHH-------TTSCCEEEEECHHHHHHHTTTCHHHHT--TEE-EEECCCCCHHHHHTT
T ss_pred CCC-cccH--HHHHHHHHh-------CCCceEEecCCHHHHHHHHHcCHHHHh--cCC-EeecCCCCHHHHHHH
Confidence 432 3332 233333332 36788999876322 45889988 884 678888998877665
No 52
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.23 E-value=1.5e-11 Score=117.15 Aligned_cols=139 Identities=25% Similarity=0.412 Sum_probs=101.3
Q ss_pred cCCCCCCceEEEcCCCCChHHHHHHHHHHh----------CccEEEEechhhh--ccccchHHHHHHHHHHHHHhcC-Ce
Q psy11254 519 VGITPPKGCLLYGPPGTGKTLLARAVASQL----------DANFLKVVSSAIV--DKYIGESARLIREMFNYARNHQ-PC 585 (741)
Q Consensus 519 ~~~~~~~~~ll~G~~G~GKt~l~~~~a~~~----------~~~~~~v~~~~l~--~~~~g~s~~~i~~~f~~a~~~~-p~ 585 (741)
+......+++|+||||+|||+++..+|... +..++.++.+.++ .+|.|+-+..++.+++.+.... ..
T Consensus 38 L~r~~k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~ld~~~LiAg~~~rG~~E~rl~~il~e~~~~~~~i 117 (195)
T d1jbka_ 38 LQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNV 117 (195)
T ss_dssp HTSSSSCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEECHHHHHTTTCSHHHHHHHHHHHHHHHHHSTTTE
T ss_pred HhccCCCCeEEEecCCcccHHHHHHHHHHHHhCCCCHHHcCceEEEeeHHHHhccCCccHHHHHHHHHHHHHHhcCCCcE
Confidence 344455689999999999999999998755 4669999999998 4577888999999998876554 57
Q ss_pred EEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCC-----CCCCCccccCCCCcceEEEcCC
Q psy11254 586 IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNR-----PDTLDPALLRPGRLDRKIEIPL 660 (741)
Q Consensus 586 Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~-----~~~ld~al~rpgR~d~~i~~~~ 660 (741)
||||||+..+++...+.+ +. ....++.-.|.. +.+-+|++|.. .-.-|+||.| ||.. |.++.
T Consensus 118 ILfIDeih~l~~~g~~~g-~~--d~~~~Lkp~L~r-------g~l~~IgatT~eey~~~~e~d~aL~r--rF~~-I~V~E 184 (195)
T d1jbka_ 118 ILFIDELHTMVGAGKADG-AM--DAGNMLKPALAR-------GELHCVGATTLDEYRQYIEKDAALER--RFQK-VFVAE 184 (195)
T ss_dssp EEEEETGGGGTT-------CC--CCHHHHHHHHHT-------TSCCEEEEECHHHHHHHTTTCHHHHT--TEEE-EECCC
T ss_pred EEEcchHHHHhcCCCCCC-cc--cHHHHHHHHHhC-------CCceEEecCCHHHHHHHHHcCHHHHh--cCCE-eecCC
Confidence 999999999986543322 11 123555555552 34558887752 2355899999 8976 78888
Q ss_pred CCHHHHHHHH
Q psy11254 661 PNEQARLEIL 670 (741)
Q Consensus 661 p~~~~r~~i~ 670 (741)
|+.++-.+|+
T Consensus 185 p~~e~t~~IL 194 (195)
T d1jbka_ 185 PSVEDTIAIL 194 (195)
T ss_dssp CCHHHHHTTC
T ss_pred CCHHHHHHHh
Confidence 9999887775
No 53
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.22 E-value=6.2e-11 Score=119.11 Aligned_cols=160 Identities=21% Similarity=0.257 Sum_probs=98.6
Q ss_pred CCCCCceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhhccccchHHHHHHHH--------------HHHHHhcCCeE
Q psy11254 521 ITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREM--------------FNYARNHQPCI 586 (741)
Q Consensus 521 ~~~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~~~~~g~s~~~i~~~--------------f~~a~~~~p~V 586 (741)
.....+++|+|||||||||+|+++|++++.+++.++.++..+.+..... +... ........+.+
T Consensus 49 ~~~~~~lll~GPpG~GKTt~a~~la~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 126 (253)
T d1sxja2 49 SGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQNASDVRSKTLLNAG--VKNALDNMSVVGYFKHNEEAQNLNGKHFV 126 (253)
T ss_dssp TTSCSEEEEECSTTSSHHHHHHHHHHHTTCEEEEECTTSCCCHHHHHHT--GGGGTTBCCSTTTTTC----CCSSTTSEE
T ss_pred CCCCceEEEECCCCCCHHHHHHHHHHHHHhhhhccccccchhhHHHHHH--HHHHhhcchhhhhhhhhhhcccccccceE
Confidence 3455679999999999999999999999999999988876544321110 0000 00011234679
Q ss_pred EEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCCccccCCCCcceEEEcCCCCHHHH
Q psy11254 587 IFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQAR 666 (741)
Q Consensus 587 l~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld~al~rpgR~d~~i~~~~p~~~~r 666 (741)
+++||+|.+.... . ..+..++...... ...++++++++....+++ +| |+...|+|++|+.+++
T Consensus 127 i~ide~~~~~~~~--------~---~~~~~~~~~~~~~--~~~ii~i~~~~~~~~~~~--l~--~~~~~i~f~~~~~~~i 189 (253)
T d1sxja2 127 IIMDEVDGMSGGD--------R---GGVGQLAQFCRKT--STPLILICNERNLPKMRP--FD--RVCLDIQFRRPDANSI 189 (253)
T ss_dssp EEECSGGGCCTTS--------T---THHHHHHHHHHHC--SSCEEEEESCTTSSTTGG--GT--TTSEEEECCCCCHHHH
T ss_pred EEeeeccccccch--------h---hhhHHHhhhhccc--cccccccccccccccccc--cc--ceeeeeeccccchhHH
Confidence 9999999975332 1 1122333332221 123444444445455554 45 7889999999999999
Q ss_pred HHHHHHhhcCccccCCCCcccccccccccccchHHH
Q psy11254 667 LEILKIHAGPIAKHGEIGDAATKWVLPFTAGGFIYI 702 (741)
Q Consensus 667 ~~i~~~~~~~~~~~~~~~~~a~~~l~~~~s~gf~~~ 702 (741)
..+++..+... +..+++.++..+... ++|.+..
T Consensus 190 ~~~l~~i~~~e--~i~i~~~~l~~i~~~-s~GDiR~ 222 (253)
T d1sxja2 190 KSRLMTIAIRE--KFKLDPNVIDRLIQT-TRGDIRQ 222 (253)
T ss_dssp HHHHHHHHHHH--TCCCCTTHHHHHHHH-TTTCHHH
T ss_pred HHHHHHHHHHh--CCCCCHHHHHHHHHh-CCCcHHH
Confidence 99999877531 224555555554433 3554433
No 54
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.22 E-value=3.5e-11 Score=119.41 Aligned_cols=148 Identities=22% Similarity=0.278 Sum_probs=95.9
Q ss_pred CcccccChHHHHHHHHHHhhccCCChHHHhhhCCCCCCCceEEcCCCChHHHHHHHHHHhcCCC-----ceeeecccccc
Q psy11254 169 TYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDAN-----FLKVVSSLFVT 243 (741)
Q Consensus 169 ~~~~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~GvlL~Gp~GtGKTtL~r~ia~~l~~~-----~~~v~~~~~~~ 243 (741)
+++|+.|.+++++.|+.++.-. . .+.++|+||||+||||+++++|.++... +..+..+...
T Consensus 22 ~~~diig~~~~~~~l~~~i~~~------------~-~~~lll~Gp~G~GKTtla~~iak~l~~~~~~~~~~e~n~s~~~- 87 (231)
T d1iqpa2 22 RLDDIVGQEHIVKRLKHYVKTG------------S-MPHLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDER- 87 (231)
T ss_dssp STTTCCSCHHHHHHHHHHHHHT------------C-CCEEEEESCTTSSHHHHHHHHHHHHHGGGHHHHEEEEETTCHH-
T ss_pred CHHHccCcHHHHHHHHHHHHcC------------C-CCeEEEECCCCCcHHHHHHHHHHHHHhcccCCCeeEEecCccc-
Confidence 7899999999999999988531 1 1348999999999999999999987542 2222211000
Q ss_pred hhhHHHHHhhhhhhhcccccccccccCCCccchhhhhcchHHHHHHHH--HHHHHhcCCeEEEeccccccccccCCCCCC
Q psy11254 244 SKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREM--FNYARNHQPCIIFMDEIDAIGGRRFSEGTS 321 (741)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~--~~~A~~~~P~ILllDEid~l~~~~~~p~~~ 321 (741)
+. .. ........ ........+.|+++||+|.+..
T Consensus 88 ~~---------------------------------~~---~~~~~~~~~~~~~~~~~~~~iilide~d~~~~-------- 123 (231)
T d1iqpa2 88 GI---------------------------------NV---IREKVKEFARTKPIGGASFKIIFLDEADALTQ-------- 123 (231)
T ss_dssp HH---------------------------------HT---THHHHHHHHHSCCGGGCSCEEEEEETGGGSCH--------
T ss_pred ch---------------------------------hH---HHHHHHHHHhhhhccCCCceEEeehhhhhcch--------
Confidence 00 00 00000000 1111234678999999987642
Q ss_pred ccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCCccccCCCccceeeecCCCCHHHHHhc
Q psy11254 322 ADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAH 385 (741)
Q Consensus 322 lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld~al~r~gr~d~~i~~~~p~~~~r~~i 385 (741)
..+..|..++..- ...+.+|++||....+++++.. |+ ..+.++.|+..+...+
T Consensus 124 ---~~~~~ll~~l~~~-----~~~~~~i~~~n~~~~i~~~l~s--R~-~~i~~~~~~~~~~~~~ 176 (231)
T d1iqpa2 124 ---DAQQALRRTMEMF-----SSNVRFILSCNYSSKIIEPIQS--RC-AIFRFRPLRDEDIAKR 176 (231)
T ss_dssp ---HHHHHHHHHHHHT-----TTTEEEEEEESCGGGSCHHHHH--TE-EEEECCCCCHHHHHHH
T ss_pred ---hHHHHHhhhcccC-----CcceEEEeccCChhhchHhHhC--cc-ccccccccchhhHHHH
Confidence 2344455554432 3467899999999999888876 65 4588999998887665
No 55
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.20 E-value=6.5e-11 Score=118.21 Aligned_cols=169 Identities=17% Similarity=0.238 Sum_probs=102.3
Q ss_pred CCcccccChHHHHHHHHHHhhccCCChHHHhhhCCCCCCCceEEcCCCChHHHHHHHHHHhcCCCceeeecccccchhhH
Q psy11254 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKED 247 (741)
Q Consensus 168 ~~~~~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~GvlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~~~~~~ 247 (741)
-+++|+.|.+++++.++..+.. -.++.+++|+||||+||||+|++++..+......-... .....+
T Consensus 9 ~~~~dlig~~~~~~~L~~~i~~------------~~~~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~~~~~--~~~~~~ 74 (239)
T d1njfa_ 9 QTFADVVGQEHVLTALANGLSL------------GRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATP--CGVCDN 74 (239)
T ss_dssp SSGGGSCSCHHHHHHHHHHHHT------------TCCCSEEEEECSTTSSHHHHHHHHHHHHHCTTCSCSSC--CSCSHH
T ss_pred CCHHHccChHHHHHHHHHHHHc------------CCCCeeEEEECCCCCcHHHHHHHHHHHhcCccccccCc--cccchH
Confidence 3799999999999999988753 13456789999999999999999999886543211110 011111
Q ss_pred HHHHhhhhhhhcccccccccccCCCccchhhhhcchHHHHHHHHHHHHH----hcCCeEEEeccccccccccCCCCCCcc
Q psy11254 248 MAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYAR----NHQPCIIFMDEIDAIGGRRFSEGTSAD 323 (741)
Q Consensus 248 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A~----~~~P~ILllDEid~l~~~~~~p~~~lD 323 (741)
+..+.... ....++. . .. ...+ -..++..+..+. .....|+||||+|.+ +
T Consensus 75 ~~~i~~~~----~~~~~~~---~--~~----~~~~--i~~ir~~~~~~~~~~~~~~~kviiIde~d~l-----------~ 128 (239)
T d1njfa_ 75 CREIEQGR----FVDLIEI---D--AA----SRTK--VEDTRDLLDNVQYAPARGRFKVYLIDEVHML-----------S 128 (239)
T ss_dssp HHHHHHTC----CTTEEEE---E--TT----CSSS--HHHHHHHHHSCCCSCSSSSSEEEEEETGGGS-----------C
T ss_pred HHHHHcCC----CCeEEEe---c--ch----hcCC--HHHHHHHHHHHHhccccCCCEEEEEECcccC-----------C
Confidence 21111110 0000000 0 00 0001 112344444432 234569999999876 2
Q ss_pred HHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCCccccCCCccceeeecCCCCHHHHHh
Q psy11254 324 REIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLA 384 (741)
Q Consensus 324 ~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld~al~r~gr~d~~i~~~~p~~~~r~~ 384 (741)
...+..|...+... ..++.+|++||+++.+.+++.+ |+ ..+.++.|+..+-..
T Consensus 129 ~~~q~~Llk~lE~~-----~~~~~~il~tn~~~~i~~~i~S--Rc-~~i~~~~~~~~~i~~ 181 (239)
T d1njfa_ 129 RHSFNALLKTLEEP-----PEHVKFLLATTDPQKLPVTILS--RC-LQFHLKALDVEQIRH 181 (239)
T ss_dssp HHHHHHHHHHHHSC-----CTTEEEEEEESCGGGSCHHHHT--TS-EEEECCCCCHHHHHH
T ss_pred HHHHHHHHHHHhcC-----CCCeEEEEEcCCccccChhHhh--hh-cccccccCcHHHhhh
Confidence 34455555555432 3567899999999999999887 55 468888888766544
No 56
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.19 E-value=3.3e-11 Score=119.23 Aligned_cols=151 Identities=23% Similarity=0.275 Sum_probs=94.0
Q ss_pred CCcccccChHHHHHHHHHHhhccCCChHHHhhhCCCCCCCceEEcCCCChHHHHHHHHHHhcCCCc-----eeeeccccc
Q psy11254 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANF-----LKVVSSLFV 242 (741)
Q Consensus 168 ~~~~~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~GvlL~Gp~GtGKTtL~r~ia~~l~~~~-----~~v~~~~~~ 242 (741)
-+++|+.|-+++++.|+..+.-. .+ ..++|+||||+||||+++++|.++.... .....+...
T Consensus 11 ~~~~divg~~~~~~~L~~~i~~~------------~~-~~lLl~Gp~G~GKttl~~~la~~l~~~~~~~~~~e~~~~~~~ 77 (227)
T d1sxjc2 11 ETLDEVYGQNEVITTVRKFVDEG------------KL-PHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDR 77 (227)
T ss_dssp SSGGGCCSCHHHHHHHHHHHHTT------------CC-CCEEEECSSSSSHHHHHHHHHHHHHTTSHHHHEEEECTTSCC
T ss_pred CCHHHccCcHHHHHHHHHHHHcC------------CC-CeEEEECCCCCChhHHHHHHHHHhhcCCCcceeEEecccccC
Confidence 47899999999999999987531 12 2488999999999999999999875321 011000000
Q ss_pred chhhHHHHHhhhhhhhcccccccccccCCCccchhhhhcchHHHHHHHHHHHHHhcCCeEEEeccccccccccCCCCCCc
Q psy11254 243 TSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSA 322 (741)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~~~~~~p~~~l 322 (741)
. ............ ........+..+++|||+|.+.
T Consensus 78 ~---------------------------------~~~~~~~~~~~~--~~~~~~~~~~kiiiiDe~d~~~---------- 112 (227)
T d1sxjc2 78 G---------------------------------IDVVRNQIKDFA--STRQIFSKGFKLIILDEADAMT---------- 112 (227)
T ss_dssp S---------------------------------HHHHHTHHHHHH--HBCCSSSCSCEEEEETTGGGSC----------
T ss_pred C---------------------------------eeeeecchhhcc--ccccccCCCeEEEEEeccccch----------
Confidence 0 000000000000 0011112345699999998763
Q ss_pred cHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCCccccCCCccceeeecCCCCHHHHHhc
Q psy11254 323 DREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAH 385 (741)
Q Consensus 323 D~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld~al~r~gr~d~~i~~~~p~~~~r~~i 385 (741)
...+..|...+.... ..+.++++||.+..+++++.+ |+ ..+.|..|+..+-..+
T Consensus 113 -~~~~~~Ll~~le~~~-----~~~~~~~~~~~~~~i~~~i~s--r~-~~i~~~~~~~~~i~~~ 166 (227)
T d1sxjc2 113 -NAAQNALRRVIERYT-----KNTRFCVLANYAHKLTPALLS--QC-TRFRFQPLPQEAIERR 166 (227)
T ss_dssp -HHHHHHHHHHHHHTT-----TTEEEEEEESCGGGSCHHHHT--TS-EEEECCCCCHHHHHHH
T ss_pred -hhHHHHHHHHhhhcc-----cceeeccccCcHHHhHHHHHH--HH-hhhccccccccccccc
Confidence 234555666665432 467899999999999998887 54 4678888887765544
No 57
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.17 E-value=1.7e-11 Score=130.28 Aligned_cols=208 Identities=21% Similarity=0.314 Sum_probs=115.4
Q ss_pred CcccccChHHHHHHHHHHhhccCCChHHHhhhCCCCCCCceEEcCCCChHHHHHHHHHHhcCCCceeeecccccchhhHH
Q psy11254 169 TYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDM 248 (741)
Q Consensus 169 ~~~~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~GvlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~~~~~~~ 248 (741)
.++.+.|-++.++++.+.+.... ..+++|+||||+|||+++..+|..+-.. .+... +
T Consensus 20 ~ld~~~gr~~ei~~~~~~L~r~~-------------k~n~llvG~~GvGKtaiv~~la~~i~~~--~vp~~--l------ 76 (387)
T d1qvra2 20 KLDPVIGRDEEIRRVIQILLRRT-------------KNNPVLIGEPGVGKTAIVEGLAQRIVKG--DVPEG--L------ 76 (387)
T ss_dssp CSCCCCSCHHHHHHHHHHHHCSS-------------CCCCEEEECTTSCHHHHHHHHHHHHHHT--CSCTT--S------
T ss_pred CCCCCcCcHHHHHHHHHHHhcCC-------------CCCCeEECCCCCCHHHHHHHHHHHHHhC--CCCHH--H------
Confidence 35568899999999999887432 2347899999999999999888754211 00000 0
Q ss_pred HHHhhhhhhhcccccccccccCCCccchh--hhhcchHHHHHHHHHHHHHhcC-CeEEEeccccccccccCCCCCCccHH
Q psy11254 249 AILMGNQLKRRSTHHLEKTYFPFYSSAIV--DKYIGESARLIREMFNYARNHQ-PCIIFMDEIDAIGGRRFSEGTSADRE 325 (741)
Q Consensus 249 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~G~~~~~v~~~~~~A~~~~-P~ILllDEid~l~~~~~~p~~~lD~~ 325 (741)
.....+..+...++ .+|-|+++.++..++..+...+ +.||||||++.|++.+.+.+ +.|.
T Consensus 77 ---------------~~~~i~~ld~~~l~ag~~~~g~~e~r~~~i~~~~~~~~~~~ilfide~h~l~~~g~~~g-~~d~- 139 (387)
T d1qvra2 77 ---------------KGKRIVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEG-AVDA- 139 (387)
T ss_dssp ---------------TTCEEEEECC-----------CHHHHHHHHHHHHHTTCSSEEEEECCC-----------------
T ss_pred ---------------cCceEEEeeHhhhhcccCcchhHHHHHHHHHHHhccCCCceEEEeccHHHHhcCCCCCC-cccH-
Confidence 00000111112232 3677999999999998887765 67899999999998664332 2232
Q ss_pred HHHHHHHHHHhccCCCCCCCeEEEEeeCCCC----CCCccccCCCccceeeecCCCCHHHHHhccccchhccCCCcccCC
Q psy11254 326 IQRTLMELLNQMDGFDSLGQVKMIMATNRPD----TLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGE 401 (741)
Q Consensus 326 ~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~----~ld~al~r~gr~d~~i~~~~p~~~~r~~i~~~l~~~~~~~~~~~~ 401 (741)
...|.-.| +++.+.||++|..-+ .-|+++.| ||. .|.+..|+.+.-..| +......+..++.
T Consensus 140 -a~~Lkp~L-------~rg~~~~I~~tT~~ey~~~e~d~al~r--rF~-~v~v~ep~~~~~~~i---l~~~~~~~e~~h~ 205 (387)
T d1qvra2 140 -GNMLKPAL-------ARGELRLIGATTLDEYREIEKDPALER--RFQ-PVYVDEPTVEETISI---LRGLKEKYEVHHG 205 (387)
T ss_dssp -----HHHH-------HTTCCCEEEEECHHHHHHHTTCTTTCS--CCC-CEEECCCCHHHHHHH---HHHHHHHHHHHTT
T ss_pred -HHHHHHHH-------hCCCcceeeecCHHHHHHhcccHHHHH--hcc-cccCCCCcHHHHHHH---HHHHHHHHHhccC
Confidence 22333333 247788999876222 34788888 884 688999999888777 4433333333333
Q ss_pred CC-----HHHHHH-----hcCCCCHHHHHHHHHHHHHHH
Q psy11254 402 ID-----YEAVVK-----LSDSFNGADLRNVCTEAGLFA 430 (741)
Q Consensus 402 ~~-----~~~la~-----~t~g~~gadi~~l~~~A~~~a 430 (741)
+. +...+. .++.+.+...-.+..+|+...
T Consensus 206 v~~~~~ai~~~v~ls~ryi~~r~~PdKAidlld~a~a~~ 244 (387)
T d1qvra2 206 VRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAAARL 244 (387)
T ss_dssp CEECHHHHHHHHHHHHHHCCSSCTHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHhcccccccccChhhHHHHHHHHHHHH
Confidence 32 222333 345566666667777776543
No 58
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.16 E-value=3.2e-11 Score=119.32 Aligned_cols=181 Identities=18% Similarity=0.162 Sum_probs=108.9
Q ss_pred ceEEEcCCCCChHHHHHHHHHHhCc-----cEEEEechhhhccccchHHHHHHHHHHHHHhcCCeEEEEcccccccCCCC
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQLDA-----NFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRF 600 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~~~-----~~~~v~~~~l~~~~~g~s~~~i~~~f~~a~~~~p~Vl~iDE~d~~~~~r~ 600 (741)
+++|+||||+|||++|+++|+++.. .+...+.++..+.............+.........|++|||+|.+.
T Consensus 37 ~lLl~Gp~G~GKttl~~~la~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kiiiiDe~d~~~---- 112 (227)
T d1sxjc2 37 HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMT---- 112 (227)
T ss_dssp CEEEECSSSSSHHHHHHHHHHHHHTTSHHHHEEEECTTSCCSHHHHHTHHHHHHHBCCSSSCSCEEEEETTGGGSC----
T ss_pred eEEEECCCCCChhHHHHHHHHHhhcCCCcceeEEecccccCCeeeeecchhhccccccccCCCeEEEEEeccccch----
Confidence 5899999999999999999998742 2455555543322111111000000111112234699999999853
Q ss_pred CCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCCccccCCCCcceEEEcCCCCHHHHHHHHHHhhcCcccc
Q psy11254 601 SEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680 (741)
Q Consensus 601 ~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld~al~rpgR~d~~i~~~~p~~~~r~~i~~~~~~~~~~~ 680 (741)
......+...+... ...++++++||.+..+++++.+ |+ ..+.|++|+.++...++..-+... +
T Consensus 113 -------~~~~~~Ll~~le~~-----~~~~~~~~~~~~~~~i~~~i~s--r~-~~i~~~~~~~~~i~~~l~~I~~~e--~ 175 (227)
T d1sxjc2 113 -------NAAQNALRRVIERY-----TKNTRFCVLANYAHKLTPALLS--QC-TRFRFQPLPQEAIERRIANVLVHE--K 175 (227)
T ss_dssp -------HHHHHHHHHHHHHT-----TTTEEEEEEESCGGGSCHHHHT--TS-EEEECCCCCHHHHHHHHHHHHHTT--T
T ss_pred -------hhHHHHHHHHhhhc-----ccceeeccccCcHHHhHHHHHH--HH-hhhccccccccccccccccccccc--c
Confidence 12234444444432 3478899999999999999987 76 568999999999999888766532 2
Q ss_pred CCCCccccccccccc-ccchHHHHHHHhhhhhhhcC-CCcccHHHHHHH
Q psy11254 681 GEIGDAATKWVLPFT-AGGFIYIATVSVIPELLEDT-SPKQTVKEILAL 727 (741)
Q Consensus 681 ~~~~~~a~~~l~~~~-s~gf~~~a~~~~~~~l~~~~-~~~~s~~~i~~~ 727 (741)
..+++.+...+.... .+-+..++.++.+...+... ....+.+.|..+
T Consensus 176 i~i~~~~l~~i~~~s~Gd~R~ain~Lq~~~~~~~~~~~~~It~~~v~e~ 224 (227)
T d1sxjc2 176 LKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYEC 224 (227)
T ss_dssp CCBCHHHHHHHHHHHTTCHHHHHHHTTTTTTTTCSSSCCCBCHHHHHHH
T ss_pred ccCCHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCCCCCCeeCHHHHHHH
Confidence 356666666554442 22234444444443333332 234566655533
No 59
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.15 E-value=1.7e-10 Score=115.73 Aligned_cols=174 Identities=17% Similarity=0.216 Sum_probs=94.9
Q ss_pred CCcccccChHHHHHHHHHHhhccCCChHHHhhhCCCCCCCceEEcCCCChHHHHHHHHHHhcCCCceeeec---ccccch
Q psy11254 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVS---SLFVTS 244 (741)
Q Consensus 168 ~~~~~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~GvlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~---~~~~~~ 244 (741)
.+++++.|.+++++.|+..+..+ ....+++|+|||||||||+++++|..+......... ......
T Consensus 8 ~~~~diig~~~~~~~L~~~~~~~------------~~~~~lll~Gp~G~GKTt~~~~la~~l~~~~~~~~~~~~~~~~~~ 75 (252)
T d1sxje2 8 KSLNALSHNEELTNFLKSLSDQP------------RDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTA 75 (252)
T ss_dssp CSGGGCCSCHHHHHHHHTTTTCT------------TCCCCEEEECSTTSSHHHHHHTHHHHHSCTTCCC-----------
T ss_pred CCHHHccCcHHHHHHHHHHHHcC------------CCCCeEEEECCCCCCHHHHHHHHHHhhcCcccccccccccccccc
Confidence 46899999999999998766421 123358999999999999999999986322111110 000000
Q ss_pred hhHHHHHhhhhhhhcccccccccccCCCccchhhhhcchHHHHHHHHHH--------------HHHhcCCeEEEeccccc
Q psy11254 245 KEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFN--------------YARNHQPCIIFMDEIDA 310 (741)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~--------------~A~~~~P~ILllDEid~ 310 (741)
..... ................. +.......+...+. ........+++|||+|.
T Consensus 76 ~~~~~---------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiiide~d~ 142 (252)
T d1sxje2 76 SNRKL---------ELNVVSSPYHLEITPSD----MGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANS 142 (252)
T ss_dssp ----------------CCEECSSEEEECCC--------CCHHHHHHHHHHHTTTTC------------CCEEEEEECTTS
T ss_pred ccchh---------hhhhccCCccceeeecc----cccCCcceeeehhhhhhhhhhhhhhhcccccCCCceEEEeccccc
Confidence 00000 00000000000000000 00000000000110 01123456999999887
Q ss_pred cccccCCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCCccccCCCccceeeecCCCCHHHHHhc
Q psy11254 311 IGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAH 385 (741)
Q Consensus 311 l~~~~~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld~al~r~gr~d~~i~~~~p~~~~r~~i 385 (741)
+ .......+..++... ..++.+|++||+++.+++++.. |+ ..|.|+.|+..+...+
T Consensus 143 l-----------~~~~~~~l~~~~e~~-----~~~~~~Il~tn~~~~i~~~l~s--R~-~~i~~~~~~~~~~~~~ 198 (252)
T d1sxje2 143 L-----------TKDAQAALRRTMEKY-----SKNIRLIMVCDSMSPIIAPIKS--QC-LLIRCPAPSDSEISTI 198 (252)
T ss_dssp S-----------CHHHHHHHHHHHHHS-----TTTEEEEEEESCSCSSCHHHHT--TS-EEEECCCCCHHHHHHH
T ss_pred c-----------ccccchhhhcccccc-----cccccceeeeccccchhhhhhc--ch-heeeecccchhhHHHH
Confidence 6 233345555565543 2467899999999999998886 77 5789999999887665
No 60
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.12 E-value=2.3e-10 Score=113.55 Aligned_cols=183 Identities=19% Similarity=0.217 Sum_probs=114.0
Q ss_pred ceEEEcCCCCChHHHHHHHHHHh------CccEEEEechhhhccc-cchHHHHH---------HHHHHHHHhcCCeEEEE
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQL------DANFLKVVSSAIVDKY-IGESARLI---------REMFNYARNHQPCIIFM 589 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~------~~~~~~v~~~~l~~~~-~g~s~~~i---------~~~f~~a~~~~p~Vl~i 589 (741)
+++|+|||||||||+++++|+++ ....+.++.+...+.. +.+..... ...+.........|+||
T Consensus 35 ~lll~Gp~G~GKTtl~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viii 114 (237)
T d1sxjd2 35 HMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIIL 114 (237)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEEECSSSCCCHHHHTTHHHHHHHSCCCCCCTTHHHHSCCCSCEEEEE
T ss_pred eEEEECCCCCChHHHHHHHHHHHcCCcccccchhheeccccccchHHHHHHHHHhhhhhhhhhHHHHhhccccCceEEEE
Confidence 48999999999999999999986 3345555554332211 11111110 00111111223459999
Q ss_pred cccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCCccccCCCCcceEEEcCCCCHHHHHHH
Q psy11254 590 DEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEI 669 (741)
Q Consensus 590 DE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld~al~rpgR~d~~i~~~~p~~~~r~~i 669 (741)
||+|.+.. .....+..++... ...+.+|.+||..+.+.+++.+ |+ .+|.|++|+.++...+
T Consensus 115 De~d~l~~-----------~~~~~l~~~~~~~-----~~~~~~i~~~~~~~~~~~~l~s--r~-~~i~f~~~~~~~~~~~ 175 (237)
T d1sxjd2 115 DEADSMTA-----------DAQSALRRTMETY-----SGVTRFCLICNYVTRIIDPLAS--QC-SKFRFKALDASNAIDR 175 (237)
T ss_dssp TTGGGSCH-----------HHHHHHHHHHHHT-----TTTEEEEEEESCGGGSCHHHHH--HS-EEEECCCCCHHHHHHH
T ss_pred ecccccCH-----------HHHHHHhhccccc-----cccccccccccccccccccccc--hh-hhhccccccccccchh
Confidence 99998631 2234444445432 3467788999999999999887 87 6789999999999999
Q ss_pred HHHhhcCccccCCCCcccccccccccc-cchHHHHHHHhhhhhhhc--CCCcccHHHHHHHHHH
Q psy11254 670 LKIHAGPIAKHGEIGDAATKWVLPFTA-GGFIYIATVSVIPELLED--TSPKQTVKEILALLLG 730 (741)
Q Consensus 670 ~~~~~~~~~~~~~~~~~a~~~l~~~~s-~gf~~~a~~~~~~~l~~~--~~~~~s~~~i~~~l~g 730 (741)
++..+... +..+++.++..++.... +-+..++.++.+...... .....+.++|. .++|
T Consensus 176 L~~i~~~e--~i~i~~~~l~~ia~~s~gd~R~ai~~L~~~~~~~~~~~~~~~It~~~i~-e~~g 236 (237)
T d1sxjd2 176 LRFISEQE--NVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVE-ELAG 236 (237)
T ss_dssp HHHHHHTT--TCCCCHHHHHHHHHHTSSCHHHHHHHHHHTHHHHHHHCSCCCCCHHHHH-HHHT
T ss_pred hhhhhhhh--cCcCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhchhcCCCCccCHHHHH-HhhC
Confidence 98776642 33677777776665542 234445555443333322 34557888877 4444
No 61
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=99.10 E-value=8.8e-11 Score=124.07 Aligned_cols=149 Identities=25% Similarity=0.405 Sum_probs=94.2
Q ss_pred CCCceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhhc-cccchH-HHHHHHHHHHH----HhcCCeEEEEccccccc
Q psy11254 523 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD-KYIGES-ARLIREMFNYA----RNHQPCIIFMDEIDAIG 596 (741)
Q Consensus 523 ~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~~-~~~g~s-~~~i~~~f~~a----~~~~p~Vl~iDE~d~~~ 596 (741)
++.++||+||+|||||.+|+++|..++.+|+.++++.+.. .|+|.. +..++.+...+ +....+|++|||+|...
T Consensus 67 p~~niLfiGPTGvGKTElAk~LA~~~~~~~ir~D~s~~~e~gyvg~dv~~~i~~l~~~~~~~v~~~~~~iv~lDEieK~~ 146 (364)
T d1um8a_ 67 SKSNILLIGPTGSGKTLMAQTLAKHLDIPIAISDATSLTEAGYVGEDVENILTRLLQASDWNVQKAQKGIVFIDEIDKIS 146 (364)
T ss_dssp CCCCEEEECCTTSSHHHHHHHHHHHTTCCEEEEEGGGCC--------CTHHHHHHHHHTTTCHHHHTTSEEEEETGGGC-
T ss_pred CCcceeeeCCCCccHHHHHHHHHhhcccceeehhhhhcccchhhHhhhccchhhhhhhchhHHHHhhcccchhhhhhhhc
Confidence 4677999999999999999999999999999999998765 355542 23455555543 34467899999999976
Q ss_pred CCCCCCC---CcccHHHHHHHHHHHHH--ccCCC------CCCCeEEEEeeCC---------------------------
Q psy11254 597 GRRFSEG---TSADREIQRTLMELLNQ--MDGFD------SLGQVKMIMATNR--------------------------- 638 (741)
Q Consensus 597 ~~r~~~~---~~~~~~~~~~l~~lL~~--~~g~~------~~~~v~vi~tTn~--------------------------- 638 (741)
+...... ..+++.+.+.+.++++. +.-.+ ...+.++|.|+|-
T Consensus 147 ~~s~~~~~~~d~a~~~V~~~lLqild~~~~~~~~~~gr~~~~~~~i~i~t~~i~~~~~ga~~~~~~~~~~~~~~~~~~~~ 226 (364)
T d1um8a_ 147 RLSENRSITRDVSGEGVQQALLKIVEGSLVNIPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFT 226 (364)
T ss_dssp -------------CHHHHHHHHHHHHCCEEC---------------CEECTTCEEEEEECCTTHHHHTTTSCSSCCCSCC
T ss_pred cccccccccccccchHHHHhhhhhhcCceeccCCCCCCcCCcceeEEEeehhhhhhhcccchhhhhhhhhhccccccccc
Confidence 5432111 12445566777777662 11101 1234567777764
Q ss_pred ----------------------CCCCCccccCCCCcceEEEcCCCCHHHHHHHHHHh
Q psy11254 639 ----------------------PDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673 (741)
Q Consensus 639 ----------------------~~~ld~al~rpgR~d~~i~~~~p~~~~r~~i~~~~ 673 (741)
+..+-|.|+ ||||.++.|.+.+.+...+|+...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~f~PEf~--gRi~~iv~f~~L~~~~l~~Il~~~ 281 (364)
T d1um8a_ 227 QEKMSKKEQEAILHLVQTHDLVTYGLIPELI--GRLPVLSTLDSISLEAMVDILQKP 281 (364)
T ss_dssp CSSCCTTTTTTSGGGCCHHHHHHTTCCHHHH--TTCCEEEECCCCCHHHHHHHHHSS
T ss_pred ccccchhhhhhhhccccHHHHhhhhhHHHHH--HHhcchhhHhhhhHHHHHHHHHHH
Confidence 112445565 599999999999999999999753
No 62
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.08 E-value=9.2e-11 Score=119.82 Aligned_cols=71 Identities=14% Similarity=0.193 Sum_probs=58.1
Q ss_pred chhhhhcchHHHHH----HHHHHHHHhcCCeEEEeccccccccccCCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEE
Q psy11254 275 AIVDKYIGESARLI----REMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIM 350 (741)
Q Consensus 275 ~~~~~~~G~~~~~v----~~~~~~A~~~~P~ILllDEid~l~~~~~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~ 350 (741)
..+..+|||+++.+ +.++++++..+|.+|+||| |++++|+..+..|.+++..+.. .+..||+
T Consensus 197 ~~~~~lSgGe~~~~~la~~la~~~~l~~~~~llllDE----------p~~~Ld~~~~~~l~~~l~~~~~----~~~qviv 262 (292)
T g1f2t.1 197 RPLTFLSGGERIALGLAFRLAMSLYLAGEISLLILDE----------PTPYLDEERRRKLITIMERYLK----KIPQVIL 262 (292)
T ss_dssp ECGGGSCHHHHHHHHHHHHHHHHHHHHSSCSEEEEES----------CSCTTCHHHHHHHHHHHHHTGG----GSSEEEE
T ss_pred CchhhcchHHHHHHHHHHHHHHhhhhcCCCCEEEEeC----------CcccCCHHHHHHHHHHHHHHHh----CCCEEEE
Confidence 44677788877743 3367778889999999999 9999999999999999988764 2348999
Q ss_pred eeCCCCCCC
Q psy11254 351 ATNRPDTLD 359 (741)
Q Consensus 351 at~~~~~ld 359 (741)
+||+++.++
T Consensus 263 ~TH~~~~~~ 271 (292)
T g1f2t.1 263 VSHDEELKD 271 (292)
T ss_dssp EESCGGGGG
T ss_pred EeecHHHHH
Confidence 999988775
No 63
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.06 E-value=2.2e-10 Score=121.53 Aligned_cols=158 Identities=25% Similarity=0.390 Sum_probs=98.4
Q ss_pred cCCCCCCceEEEcCCCCChHHHHHHHHHHh----------CccEEEEechhhhc--cccchHHHHHHHHHHHHHhcC-Ce
Q psy11254 519 VGITPPKGCLLYGPPGTGKTLLARAVASQL----------DANFLKVVSSAIVD--KYIGESARLIREMFNYARNHQ-PC 585 (741)
Q Consensus 519 ~~~~~~~~~ll~G~~G~GKt~l~~~~a~~~----------~~~~~~v~~~~l~~--~~~g~s~~~i~~~f~~a~~~~-p~ 585 (741)
+......+++|+||||+|||+++..+|... +..++.++.+.++. +|.|+-+..+..++..+.... ++
T Consensus 38 L~r~~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~~g~~e~r~~~i~~~~~~~~~~~ 117 (387)
T d1qvra2 38 LLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEV 117 (387)
T ss_dssp HHCSSCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEECC-----------CHHHHHHHHHHHHHTTCSSE
T ss_pred HhcCCCCCCeEECCCCCCHHHHHHHHHHHHHhCCCCHHHcCceEEEeeHhhhhcccCcchhHHHHHHHHHHHhccCCCce
Confidence 334455678999999999999998888754 34589999999885 678999999999999887764 68
Q ss_pred EEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeC-----CCCCCCccccCCCCcceEEEcCC
Q psy11254 586 IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATN-----RPDTLDPALLRPGRLDRKIEIPL 660 (741)
Q Consensus 586 Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn-----~~~~ld~al~rpgR~d~~i~~~~ 660 (741)
||||||+..+++...+.+ + .....++.-.|.. +.+-+|++|. ..+ =|+||.| ||.. |.++.
T Consensus 118 ilfide~h~l~~~g~~~g-~--~d~a~~Lkp~L~r-------g~~~~I~~tT~~ey~~~e-~d~al~r--rF~~-v~v~e 183 (387)
T d1qvra2 118 ILFIDELHTVVGAGKAEG-A--VDAGNMLKPALAR-------GELRLIGATTLDEYREIE-KDPALER--RFQP-VYVDE 183 (387)
T ss_dssp EEEECCC----------------------HHHHHT-------TCCCEEEEECHHHHHHHT-TCTTTCS--CCCC-EEECC
T ss_pred EEEeccHHHHhcCCCCCC-c--ccHHHHHHHHHhC-------CCcceeeecCHHHHHHhc-ccHHHHH--hccc-ccCCC
Confidence 899999999986543322 1 2334556666643 3455788774 233 4899999 9976 78999
Q ss_pred CCHHHHHHHHHHhhcCcccc--CCCCcccccc
Q psy11254 661 PNEQARLEILKIHAGPIAKH--GEIGDAATKW 690 (741)
Q Consensus 661 p~~~~r~~i~~~~~~~~~~~--~~~~~~a~~~ 690 (741)
|+.++-..|++.....+..+ ..+++.++..
T Consensus 184 p~~~~~~~il~~~~~~~e~~h~v~~~~~ai~~ 215 (387)
T d1qvra2 184 PTVEETISILRGLKEKYEVHHGVRISDSAIIA 215 (387)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCEECHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHhccCCcccHHHHHH
Confidence 99999999999776554332 3455555433
No 64
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=99.04 E-value=1.5e-10 Score=109.50 Aligned_cols=131 Identities=12% Similarity=0.141 Sum_probs=70.3
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCceeeecccccchhhHHHHHhhhhh----hhcccccccccccCC-----Cccchhh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMAILMGNQL----KRRSTHHLEKTYFPF-----YSSAIVD 278 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~-----~~~~~~~ 278 (741)
++|+||||||||||+++|++.+.++.+.+........... ...+... ............... .......
T Consensus 3 i~I~G~~G~GKSTLl~~i~~~l~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (178)
T d1ye8a1 3 IIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETK--KRTGFRIITTEGKKKIFSSKFFTSKKLVGSYGVNVQYF 80 (178)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHGGGEEEEEEEEEC--------CCEEEEEETTCCEEEEEETTCCCSSEETTEEECHHHH
T ss_pred EEEECCCCcHHHHHHHHHHhcCCCCcceEEECCcchHHHH--HhhhhhhhhhhHHHHHHhhhhhhhhhhhhhhhcCcchh
Confidence 6899999999999999999999998777654321110000 0000000 000000000000000 0011122
Q ss_pred hhcchHHHHHHHHHHHHHhcCCeEEEeccccccccccCCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCC
Q psy11254 279 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDT 357 (741)
Q Consensus 279 ~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~~~~~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ 357 (741)
..+++..++. +++.+...+|++|++||+.. ....+......+.+++. ..+.++|+++|+...
T Consensus 81 ~~~~~~~~~~--~l~~~~~~~~~vlllDE~~~--------~~~~~~~~~~~l~~~l~-------~~~~~il~~~h~~~~ 142 (178)
T d1ye8a1 81 EELAIPILER--AYREAKKDRRKVIIIDEIGK--------MELFSKKFRDLVRQIMH-------DPNVNVVATIPIRDV 142 (178)
T ss_dssp HHHHHHHHHH--HHHHHHHCTTCEEEECCCST--------TGGGCHHHHHHHHHHHT-------CTTSEEEEECCSSCC
T ss_pred hhhhhhhHHH--HHHHHHhcCCCceeecCCCc--------cchhhHHHHHHHHHHhc-------cCCCEEEEEEccHHH
Confidence 3445555544 89999999999999999432 12234444444444432 235688999997653
No 65
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.03 E-value=3.1e-10 Score=113.71 Aligned_cols=73 Identities=14% Similarity=0.227 Sum_probs=56.3
Q ss_pred CeEEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCCccccCCCCcceEEEcCCCCH
Q psy11254 584 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE 663 (741)
Q Consensus 584 p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld~al~rpgR~d~~i~~~~p~~ 663 (741)
..+++|||+|.+. ......+..++++ ...++.+|++||+++.+++++.+ |+ ..|+|++|+.
T Consensus 132 ~~iiiide~d~l~-----------~~~~~~l~~~~e~-----~~~~~~~Il~tn~~~~i~~~l~s--R~-~~i~~~~~~~ 192 (252)
T d1sxje2 132 YKCVIINEANSLT-----------KDAQAALRRTMEK-----YSKNIRLIMVCDSMSPIIAPIKS--QC-LLIRCPAPSD 192 (252)
T ss_dssp CEEEEEECTTSSC-----------HHHHHHHHHHHHH-----STTTEEEEEEESCSCSSCHHHHT--TS-EEEECCCCCH
T ss_pred ceEEEeccccccc-----------cccchhhhccccc-----ccccccceeeeccccchhhhhhc--ch-heeeecccch
Confidence 4599999999862 1223444555554 23568899999999999999987 88 5899999999
Q ss_pred HHHHHHHHHhhc
Q psy11254 664 QARLEILKIHAG 675 (741)
Q Consensus 664 ~~r~~i~~~~~~ 675 (741)
++..++++.-+.
T Consensus 193 ~~~~~~l~~i~~ 204 (252)
T d1sxje2 193 SEISTILSDVVT 204 (252)
T ss_dssp HHHHHHHHHHHH
T ss_pred hhHHHHHHHHHH
Confidence 999999986654
No 66
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=99.03 E-value=5e-10 Score=113.00 Aligned_cols=196 Identities=15% Similarity=0.143 Sum_probs=116.6
Q ss_pred CCCceEEEcCCCCChHHHHHHHHHHhC----ccEEEEechhhh----------------ccccchH-HHHHHHHHHHHHh
Q psy11254 523 PPKGCLLYGPPGTGKTLLARAVASQLD----ANFLKVVSSAIV----------------DKYIGES-ARLIREMFNYARN 581 (741)
Q Consensus 523 ~~~~~ll~G~~G~GKt~l~~~~a~~~~----~~~~~v~~~~l~----------------~~~~g~s-~~~i~~~f~~a~~ 581 (741)
.+.+++|+||||||||+++++++..+. ..++.++..... ..+.+.. ......+.+....
T Consensus 42 ~~~~lll~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (276)
T d1fnna2 42 HYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRNFTAIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRE 121 (276)
T ss_dssp SCCEEEEECCTTSSHHHHHHHHHHHHTTSCCCEEEEEETTTCCSHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHH
T ss_pred CCCceEEECCCCCCHHHHHHHHHHHHhcccCCcEEEecchhhhhhhhhhhhhHHhhhhhhhhhccchhHHHHHHHHHHhh
Confidence 456899999999999999999999874 234444432211 1111111 2223344444433
Q ss_pred -cCCeEEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCC---CCCCccccCCCCc-ceEE
Q psy11254 582 -HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRP---DTLDPALLRPGRL-DRKI 656 (741)
Q Consensus 582 -~~p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~---~~ld~al~rpgR~-d~~i 656 (741)
..+.+.++|++|.+.. .....+..++..+.. .....+.+|+++|.. +.+++++.+ |+ ...|
T Consensus 122 ~~~~~~~~~~~~d~~~~-----------~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~--r~~~~~i 187 (276)
T d1fnna2 122 RDLYMFLVLDDAFNLAP-----------DILSTFIRLGQEADK-LGAFRIALVIVGHNDAVLNNLDPSTRG--IMGKYVI 187 (276)
T ss_dssp TTCCEEEEEETGGGSCH-----------HHHHHHHHHTTCHHH-HSSCCEEEEEEESSTHHHHTSCHHHHH--HHTTCEE
T ss_pred cccccccchhHHHHhhh-----------hhhhhHHHHHhcccc-ccccceEEeecCCchhhhhhcchhhhh--hhcchhc
Confidence 3467888999997531 112223333322221 123467788888874 467777765 43 4578
Q ss_pred EcCCCCHHHHHHHHHHhhcCccccCCCCccccccccc--------cccc--chHHHHHHHhhhhhh-hcCCCcccHHHHH
Q psy11254 657 EIPLPNEQARLEILKIHAGPIAKHGEIGDAATKWVLP--------FTAG--GFIYIATVSVIPELL-EDTSPKQTVKEIL 725 (741)
Q Consensus 657 ~~~~p~~~~r~~i~~~~~~~~~~~~~~~~~a~~~l~~--------~~s~--gf~~~a~~~~~~~l~-~~~~~~~s~~~i~ 725 (741)
+|++|+.+++.+|++.++........+++.++..+.. ..++ .+..+.....+-.++ .+.+...+.+||.
T Consensus 188 ~~~~~~~~e~~~il~~r~~~~~~~~~~~~~~l~~ia~~~~~~~~~~~~~G~~R~a~~ll~~a~~~A~~~~~~~I~~edv~ 267 (276)
T d1fnna2 188 RFSPYTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITGAQTPLDTNRGDARLAIDILYRSAYAAQQNGRKHIAPEDVR 267 (276)
T ss_dssp ECCCCBHHHHHHHHHHHHHHHBCTTSSCHHHHHHHHHHHSBSSTTCTTSCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhhhhcCCCHHHHHHHHHHHHHHHHHcCCCCcCHHHHH
Confidence 9999999999999998876544444455554433221 1222 333444443333343 4556789999999
Q ss_pred HHHHHHH
Q psy11254 726 ALLLGVF 732 (741)
Q Consensus 726 ~~l~g~~ 732 (741)
.++.-|.
T Consensus 268 ~A~~~~~ 274 (276)
T d1fnna2 268 KSSKEVL 274 (276)
T ss_dssp HHHHHHS
T ss_pred HHHHHHh
Confidence 9887653
No 67
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.02 E-value=1e-09 Score=106.85 Aligned_cols=128 Identities=18% Similarity=0.274 Sum_probs=90.1
Q ss_pred CCceEEEcCCCCChHHHHHHHHHHhC------------------------ccEEEEechhhhccccchHHHHHHHHHHHH
Q psy11254 524 PKGCLLYGPPGTGKTLLARAVASQLD------------------------ANFLKVVSSAIVDKYIGESARLIREMFNYA 579 (741)
Q Consensus 524 ~~~~ll~G~~G~GKt~l~~~~a~~~~------------------------~~~~~v~~~~l~~~~~g~s~~~i~~~f~~a 579 (741)
+..++|+||||+|||++|+.+|..+. ..++.+...+- .+.++ -..++.+.+.+
T Consensus 24 ~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~i~--~~~ir~l~~~~ 100 (207)
T d1a5ta2 24 HHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKG-KNTLG--VDAVREVTEKL 100 (207)
T ss_dssp CSEEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCSHHHHHHHHTCCTTEEEECCCTT-CSSBC--HHHHHHHHHHT
T ss_pred CeEEEEECCCCCcHHHHHHHHHHhcccccccccccccccchhhhhhhccccccchhhhhhc-ccccc--cchhhHHhhhh
Confidence 45699999999999999999998762 12222222111 11111 23455666554
Q ss_pred Hh----cCCeEEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCCccccCCCCcceE
Q psy11254 580 RN----HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 655 (741)
Q Consensus 580 ~~----~~p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld~al~rpgR~d~~ 655 (741)
.. ....|++|||+|.+. . ...+.||..|+ ++..++++|++||+++.+.|++.+ |. ..
T Consensus 101 ~~~~~~~~~kviIide~d~l~-----------~---~a~n~Llk~lE--ep~~~~~fIl~t~~~~~ll~tI~S--Rc-~~ 161 (207)
T d1a5ta2 101 NEHARLGGAKVVWVTDAALLT-----------D---AAANALLKTLE--EPPAETWFFLATREPERLLATLRS--RC-RL 161 (207)
T ss_dssp TSCCTTSSCEEEEESCGGGBC-----------H---HHHHHHHHHHT--SCCTTEEEEEEESCGGGSCHHHHT--TS-EE
T ss_pred hhccccCccceEEechhhhhh-----------h---hhhHHHHHHHH--hhcccceeeeeecChhhhhhhhcc--ee-EE
Confidence 32 345699999999852 2 24455666666 345689999999999999999987 87 79
Q ss_pred EEcCCCCHHHHHHHHHHh
Q psy11254 656 IEIPLPNEQARLEILKIH 673 (741)
Q Consensus 656 i~~~~p~~~~r~~i~~~~ 673 (741)
|.|++|+.++...+++..
T Consensus 162 i~~~~~~~~~~~~~L~~~ 179 (207)
T d1a5ta2 162 HYLAPPPEQYAVTWLSRE 179 (207)
T ss_dssp EECCCCCHHHHHHHHHHH
T ss_pred EecCCCCHHHHHHHHHHc
Confidence 999999999999888643
No 68
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.02 E-value=1.7e-09 Score=107.10 Aligned_cols=161 Identities=17% Similarity=0.198 Sum_probs=93.3
Q ss_pred CCcccccChHHHHHHHHHHhhccCCChHHHhhhCCCCCCCceEEcCCCChHHHHHHHHHHhcC------CCceeeecccc
Q psy11254 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD------ANFLKVVSSLF 241 (741)
Q Consensus 168 ~~~~~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~GvlL~Gp~GtGKTtL~r~ia~~l~------~~~~~v~~~~~ 241 (741)
-+++++.|.+++++.|+..+.-. . ...++|+|||||||||+++++|.++. .....+.....
T Consensus 9 ~~~~diig~~~~~~~l~~~i~~~------------~-~~~lll~Gp~G~GKTtl~~~i~~~l~~~~~~~~~~~~~~~~~~ 75 (237)
T d1sxjd2 9 KNLDEVTAQDHAVTVLKKTLKSA------------N-LPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDE 75 (237)
T ss_dssp SSTTTCCSCCTTHHHHHHHTTCT------------T-CCCEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEEECSSSC
T ss_pred CCHHHccCcHHHHHHHHHHHHcC------------C-CCeEEEECCCCCChHHHHHHHHHHHcCCcccccchhheecccc
Confidence 46888999999999998877521 1 12488999999999999999999862 12222221111
Q ss_pred cchhhHHHHHhhhhhhhcccccccccccCCCccchhhhhcchHHHHHHHHHHHHHhcCCeEEEeccccccccccCCCCCC
Q psy11254 242 VTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTS 321 (741)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~~~~~~p~~~ 321 (741)
. +.........+... ......... .+.........|+||||+|.+..
T Consensus 76 ~-~~~~~~~~~~~~~~--------------------~~~~~~~~~----~~~~~~~~~~~viiiDe~d~l~~-------- 122 (237)
T d1sxjd2 76 R-GISIVREKVKNFAR--------------------LTVSKPSKH----DLENYPCPPYKIIILDEADSMTA-------- 122 (237)
T ss_dssp C-CHHHHTTHHHHHHH--------------------SCCCCCCTT----HHHHSCCCSCEEEEETTGGGSCH--------
T ss_pred c-cchHHHHHHHHHhh--------------------hhhhhhhHH----HHhhccccCceEEEEecccccCH--------
Confidence 0 00000000000000 000000000 11111223345999999987742
Q ss_pred ccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCCccccCCCccceeeecCCCCHHHHHhc
Q psy11254 322 ADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAH 385 (741)
Q Consensus 322 lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld~al~r~gr~d~~i~~~~p~~~~r~~i 385 (741)
.....+..++.... ....+|+++++.+.+.+.+.+ |+ ..+.|+.|+..+-..+
T Consensus 123 ---~~~~~l~~~~~~~~-----~~~~~i~~~~~~~~~~~~l~s--r~-~~i~f~~~~~~~~~~~ 175 (237)
T d1sxjd2 123 ---DAQSALRRTMETYS-----GVTRFCLICNYVTRIIDPLAS--QC-SKFRFKALDASNAIDR 175 (237)
T ss_dssp ---HHHHHHHHHHHHTT-----TTEEEEEEESCGGGSCHHHHH--HS-EEEECCCCCHHHHHHH
T ss_pred ---HHHHHHhhcccccc-----ccccccccccccccccccccc--hh-hhhccccccccccchh
Confidence 23344445444332 456788889988888888876 66 5789999998887665
No 69
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.98 E-value=1.1e-09 Score=107.96 Aligned_cols=139 Identities=16% Similarity=0.182 Sum_probs=93.9
Q ss_pred ceEEEcCCCCChHHHHHHHHHHhCc-----cEEEEechhhhccccchHHHHHHHHHHHHHh-------cCCeEEEEcccc
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQLDA-----NFLKVVSSAIVDKYIGESARLIREMFNYARN-------HQPCIIFMDEID 593 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~~~-----~~~~v~~~~l~~~~~g~s~~~i~~~f~~a~~-------~~p~Vl~iDE~d 593 (741)
+++|+|||||||||+|+++|.+++. .++.++.++..+. ..+...+..... ....|+++||+|
T Consensus 38 ~~ll~Gp~G~GKTt~a~~la~~l~~~~~~~~~~~~n~~~~~~~------~~i~~~~~~~~~~~~~~~~~~~kviiiDe~d 111 (224)
T d1sxjb2 38 HMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGI------DVVRNQIKHFAQKKLHLPPGKHKIVILDEAD 111 (224)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHHHGGGHHHHEEEECTTSCCSH------HHHHTHHHHHHHBCCCCCTTCCEEEEEESGG
T ss_pred eEEEECCCCCCchhhHHHHHHHHhccccccccccccccccCCc------eehhhHHHHHHHhhccCCCcceEEEEEeccc
Confidence 5899999999999999999998753 3666666654322 112222221111 234599999999
Q ss_pred cccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCCccccCCCCcceEEEcCCCCHHHHHHHHHHh
Q psy11254 594 AIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673 (741)
Q Consensus 594 ~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld~al~rpgR~d~~i~~~~p~~~~r~~i~~~~ 673 (741)
.+.. ..+..+...+.. ....+.++++||..+.+.+++.+ |+ ..|+|++|+.++...++...
T Consensus 112 ~~~~-----------~~~~~ll~~~e~-----~~~~~~~i~~~~~~~~i~~~l~s--r~-~~i~~~~~~~~~i~~~l~~i 172 (224)
T d1sxjb2 112 SMTA-----------GAQQALRRTMEL-----YSNSTRFAFACNQSNKIIEPLQS--QC-AILRYSKLSDEDVLKRLLQI 172 (224)
T ss_dssp GSCH-----------HHHHTTHHHHHH-----TTTTEEEEEEESCGGGSCHHHHT--TS-EEEECCCCCHHHHHHHHHHH
T ss_pred ccch-----------hHHHHHhhhccc-----cccceeeeeccCchhhhhhHHHH--HH-HHhhhcccchhhhHHHHHHH
Confidence 8631 223334333432 33467789999999999999987 77 46999999999999999876
Q ss_pred hcCccccCCCCccccccc
Q psy11254 674 AGPIAKHGEIGDAATKWV 691 (741)
Q Consensus 674 ~~~~~~~~~~~~~a~~~l 691 (741)
+... +..+++..+..+
T Consensus 173 ~~~e--~~~i~~~~l~~I 188 (224)
T d1sxjb2 173 IKLE--DVKYTNDGLEAI 188 (224)
T ss_dssp HHHH--TCCBCHHHHHHH
T ss_pred HHhc--ccCCCHHHHHHH
Confidence 6532 234555555444
No 70
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=98.96 E-value=8e-10 Score=114.61 Aligned_cols=140 Identities=21% Similarity=0.369 Sum_probs=88.3
Q ss_pred ccccChHHHHHHHHHHhhccCCChHHHhhhCCCCCCC-ceEEcCCCChHHHHHHHHHHhcCCCceeeecccccchhhHHH
Q psy11254 171 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKG-CLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMA 249 (741)
Q Consensus 171 ~~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~G-vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~~~~~~~~ 249 (741)
..|.|.++.++.|.+.+.....+- . +-.-|.+ ++|+||+|||||.||++||..++.++..+..+.+....
T Consensus 22 ~~viGQ~~a~~~v~~~v~~~~~~l---~--~~~~p~~~~lf~Gp~GvGKT~lak~la~~l~~~~i~~d~s~~~~~~---- 92 (315)
T d1r6bx3 22 MLVFGQDKAIEALTEAIKMARAGL---G--HEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERH---- 92 (315)
T ss_dssp TTSCSCHHHHHHHHHHHHHHHTTC---S--CTTSCSEEEEEECSTTSSHHHHHHHHHHHHTCEEEEEEGGGCSSSS----
T ss_pred CeecChHHHHHHHHHHHHHHHccC---C--CCCCCceEEEEECCCcchhHHHHHHHHhhccCCeeEeccccccchh----
Confidence 457999999999999875322110 0 1122344 78999999999999999999999888888764332211
Q ss_pred HHhhhhhhhcccccccccccCCCccchh---hhhcchHHHHHHHHHHHHHhcCCeEEEeccccccccccCCCCCCccHHH
Q psy11254 250 ILMGNQLKRRSTHHLEKTYFPFYSSAIV---DKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI 326 (741)
Q Consensus 250 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~~~~~~p~~~lD~~~ 326 (741)
..+.++ ..|.|...... ..........+|+++||+|+. ++..
T Consensus 93 ----------------------~~~~l~g~~~gy~g~~~~~~--l~~~~~~~~~~vvl~DeieKa-----------~~~V 137 (315)
T d1r6bx3 93 ----------------------TVSRLIGAPPGYVGFDQGGL--LTDAVIKHPHAVLLLDEIEKA-----------HPDV 137 (315)
T ss_dssp ----------------------CCSSSCCCCSCSHHHHHTTH--HHHHHHHCSSEEEEEETGGGS-----------CHHH
T ss_pred ----------------------hhhhhcccCCCccccccCCh--hhHHHHhCccchhhhcccccc-----------cchH
Confidence 001111 23555444433 333344566689999999974 3456
Q ss_pred HHHHHHHHHhc---cCC---CCCCCeEEEEeeCC
Q psy11254 327 QRTLMELLNQM---DGF---DSLGQVKMIMATNR 354 (741)
Q Consensus 327 ~~~l~~lL~~l---~~~---~~~~~v~vI~at~~ 354 (741)
...|++++..= ++. ....+..+|++||-
T Consensus 138 ~~~lLqild~G~ltd~~Gr~vdf~n~iiI~Tsni 171 (315)
T d1r6bx3 138 FNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNA 171 (315)
T ss_dssp HHHHHHHHHHSEEEETTTEEEECTTEEEEEEECS
T ss_pred hhhhHHhhccceecCCCCCccCccceEEEeccch
Confidence 77888888541 110 12356778888873
No 71
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.93 E-value=1.2e-09 Score=107.52 Aligned_cols=145 Identities=19% Similarity=0.243 Sum_probs=94.1
Q ss_pred CCcccccChHHHHHHHHHHhhccCCChHHHhhhCCCCCCCceEEcCCCChHHHHHHHHHHhcCCCce-----eeeccccc
Q psy11254 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFL-----KVVSSLFV 242 (741)
Q Consensus 168 ~~~~~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~GvlL~Gp~GtGKTtL~r~ia~~l~~~~~-----~v~~~~~~ 242 (741)
-+++|+.|-+++++.|++.+.-. .. ..++|+|||||||||+|+++|..+..... .+..+..
T Consensus 12 ~~~~d~ig~~~~~~~L~~~~~~~------------~~-~~~ll~Gp~G~GKTt~a~~la~~l~~~~~~~~~~~~n~~~~- 77 (224)
T d1sxjb2 12 QVLSDIVGNKETIDRLQQIAKDG------------NM-PHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDD- 77 (224)
T ss_dssp SSGGGCCSCTHHHHHHHHHHHSC------------CC-CCEEEECSTTSSHHHHHHHHHHHHHGGGHHHHEEEECTTSC-
T ss_pred CCHHHhcCCHHHHHHHHHHHHcC------------CC-CeEEEECCCCCCchhhHHHHHHHHhcccccccccccccccc-
Confidence 46899999999999999987521 11 24889999999999999999998765321 1111000
Q ss_pred chhhHHHHHhhhhhhhcccccccccccCCCccchhhhhcchHHHHHHHH---HHHH----HhcCCeEEEecccccccccc
Q psy11254 243 TSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREM---FNYA----RNHQPCIIFMDEIDAIGGRR 315 (741)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~---~~~A----~~~~P~ILllDEid~l~~~~ 315 (741)
.| ...+... +... ......++++||+|.+..
T Consensus 78 --------------------------------------~~--~~~i~~~~~~~~~~~~~~~~~~~kviiiDe~d~~~~-- 115 (224)
T d1sxjb2 78 --------------------------------------RG--IDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTA-- 115 (224)
T ss_dssp --------------------------------------CS--HHHHHTHHHHHHHBCCCCCTTCCEEEEEESGGGSCH--
T ss_pred --------------------------------------CC--ceehhhHHHHHHHhhccCCCcceEEEEEecccccch--
Confidence 00 0000001 1111 113456999999987642
Q ss_pred CCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCCccccCCCccceeeecCCCCHHHHHhc
Q psy11254 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAH 385 (741)
Q Consensus 316 ~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld~al~r~gr~d~~i~~~~p~~~~r~~i 385 (741)
..+..+...+... .....+++++++.+.+.+++++ |+ ..+.|+.|+..+-..+
T Consensus 116 ---------~~~~~ll~~~e~~-----~~~~~~i~~~~~~~~i~~~l~s--r~-~~i~~~~~~~~~i~~~ 168 (224)
T d1sxjb2 116 ---------GAQQALRRTMELY-----SNSTRFAFACNQSNKIIEPLQS--QC-AILRYSKLSDEDVLKR 168 (224)
T ss_dssp ---------HHHHTTHHHHHHT-----TTTEEEEEEESCGGGSCHHHHT--TS-EEEECCCCCHHHHHHH
T ss_pred ---------hHHHHHhhhcccc-----ccceeeeeccCchhhhhhHHHH--HH-HHhhhcccchhhhHHH
Confidence 2344444444432 2467889999999999988887 55 4689999998876554
No 72
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=98.82 E-value=8.9e-09 Score=99.94 Aligned_cols=166 Identities=15% Similarity=0.148 Sum_probs=93.7
Q ss_pred ChHHHHHHHHHHhhccCCChHHHhhhCCCCCCCceEEcCCCChHHHHHHHHHHhcCCCceeeecccccchhhHHHHHhhh
Q psy11254 175 GLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMAILMGN 254 (741)
Q Consensus 175 Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~GvlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~~~~~~~~~~~~~ 254 (741)
++++..+++...+.. =.++.+++|+||||+||||+++++|..+-..-...... .....++..+...
T Consensus 6 w~~~~~~~l~~~~~~------------~~l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~--~~~~~~~~~i~~~ 71 (207)
T d1a5ta2 6 WLRPDFEKLVASYQA------------GRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKS--CGHCRGCQLMQAG 71 (207)
T ss_dssp GGHHHHHHHHHHHHT------------TCCCSEEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBC--CSCSHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHc------------CCcCeEEEEECCCCCcHHHHHHHHHHhccccccccccc--ccccchhhhhhhc
Confidence 456667777666542 23566799999999999999999999875432211100 0001111111110
Q ss_pred hhhhcccccccccccCCCccchhhhhcchHHHHHHHHHHHH----HhcCCeEEEeccccccccccCCCCCCccHHHHHHH
Q psy11254 255 QLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYA----RNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 330 (741)
Q Consensus 255 ~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A----~~~~P~ILllDEid~l~~~~~~p~~~lD~~~~~~l 330 (741)
.. .....+. ..--.... ....+|++...+ ...+..|++|||+|.+. .+.+..|
T Consensus 72 ~~-------~~~~~~~---~~~~~~~i--~~~~ir~l~~~~~~~~~~~~~kviIide~d~l~-----------~~a~n~L 128 (207)
T d1a5ta2 72 TH-------PDYYTLA---PEKGKNTL--GVDAVREVTEKLNEHARLGGAKVVWVTDAALLT-----------DAAANAL 128 (207)
T ss_dssp CC-------TTEEEEC---CCTTCSSB--CHHHHHHHHHHTTSCCTTSSCEEEEESCGGGBC-----------HHHHHHH
T ss_pred cc-------cccchhh---hhhccccc--ccchhhHHhhhhhhccccCccceEEechhhhhh-----------hhhhHHH
Confidence 00 0000000 00000011 122234444433 23457799999998763 3345555
Q ss_pred HHHHHhccCCCCCCCeEEEEeeCCCCCCCccccCCCccceeeecCCCCHHHHHhc
Q psy11254 331 MELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAH 385 (741)
Q Consensus 331 ~~lL~~l~~~~~~~~v~vI~at~~~~~ld~al~r~gr~d~~i~~~~p~~~~r~~i 385 (741)
..++.+- ..++.+|++|++++.+.+.+.. |. ..+.|+.|+.++-...
T Consensus 129 lk~lEep-----~~~~~fIl~t~~~~~ll~tI~S--Rc-~~i~~~~~~~~~~~~~ 175 (207)
T d1a5ta2 129 LKTLEEP-----PAETWFFLATREPERLLATLRS--RC-RLHYLAPPPEQYAVTW 175 (207)
T ss_dssp HHHHTSC-----CTTEEEEEEESCGGGSCHHHHT--TS-EEEECCCCCHHHHHHH
T ss_pred HHHHHhh-----cccceeeeeecChhhhhhhhcc--ee-EEEecCCCCHHHHHHH
Confidence 5555432 3578999999999999998876 65 6788988887665443
No 73
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=98.80 E-value=1.7e-08 Score=105.40 Aligned_cols=52 Identities=33% Similarity=0.371 Sum_probs=40.6
Q ss_pred CCCcccccChHHHHHHHHHHhhccCCChHHHhhhCCCCCCCceEEcCCCChHHHHHHHHHHhcCC
Q psy11254 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDA 231 (741)
Q Consensus 167 ~~~~~~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~GvlL~Gp~GtGKTtL~r~ia~~l~~ 231 (741)
.+.|.+|.|.+.+|+.+.-....+- ..+++|+|||||||||++|++++.+.+
T Consensus 3 ~~~f~~I~Gq~~~kral~laa~~~~-------------~h~vLl~G~pG~GKT~lar~~~~iLp~ 54 (333)
T d1g8pa_ 3 VFPFSAIVGQEDMKLALLLTAVDPG-------------IGGVLVFGDRGTGKSTAVRALAALLPE 54 (333)
T ss_dssp CCCGGGSCSCHHHHHHHHHHHHCGG-------------GCCEEEECCGGGCTTHHHHHHHHHSCC
T ss_pred CCChhhccCcHHHHHHHHHHHhccC-------------CCeEEEECCCCccHHHHHHHHHHhCCC
Confidence 4568999999999997665443210 125999999999999999999998743
No 74
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=98.77 E-value=6.7e-09 Score=101.22 Aligned_cols=151 Identities=20% Similarity=0.346 Sum_probs=95.1
Q ss_pred ceEEEcCCCCChHHHHHHHHHHh---CccEEEEechhhhccccchHH-HHHHHHHHHHHhcCCeEEEEcccccccCCCCC
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQL---DANFLKVVSSAIVDKYIGESA-RLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 601 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~---~~~~~~v~~~~l~~~~~g~s~-~~i~~~f~~a~~~~p~Vl~iDE~d~~~~~r~~ 601 (741)
.++|+||+|||||+|+.++++++ +...+.++..++...+...-. .....+++..+. ..+|+||+++.+.++
T Consensus 38 ~l~l~G~~G~GKTHLl~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~dll~iDDi~~i~~~--- 112 (213)
T d1l8qa2 38 PIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQAMVEHLKKGTINEFRNMYKS--VDLLLLDDVQFLSGK--- 112 (213)
T ss_dssp SEEEECSSSSSHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHHHHHHHHTCHHHHHHHHHT--CSEEEEECGGGGTTC---
T ss_pred cEEEECCCCCcHHHHHHHHHHHhccCccceEEechHHHHHHHHHHHHccchhhHHHHHhh--ccchhhhhhhhhcCc---
Confidence 38999999999999999999987 345677777766554432211 112344444443 369999999998633
Q ss_pred CCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCC---ccccCCCCcc--eEEEcCCCCHHHHHHHHHHhhcC
Q psy11254 602 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLD---PALLRPGRLD--RKIEIPLPNEQARLEILKIHAGP 676 (741)
Q Consensus 602 ~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld---~al~rpgR~d--~~i~~~~p~~~~r~~i~~~~~~~ 676 (741)
......+..+++.+-. .+..+||.++..|..++ +.+.. |+. .++.++ |+.++|.+|++.+...
T Consensus 113 ------~~~~~~lf~lin~~~~---~~~~iiits~~~p~~l~~~~~dL~S--RL~~g~~~~i~-p~d~~~~~iL~~~a~~ 180 (213)
T d1l8qa2 113 ------ERTQIEFFHIFNTLYL---LEKQIILASDRHPQKLDGVSDRLVS--RFEGGILVEIE-LDNKTRFKIIKEKLKE 180 (213)
T ss_dssp ------HHHHHHHHHHHHHHHH---TTCEEEEEESSCGGGCTTSCHHHHH--HHHTSEEEECC-CCHHHHHHHHHHHHHH
T ss_pred ------hHHHHHHHHHHHHHhh---ccceEEEecCCcchhccccchHHHH--HhhCceEEEEC-CCcHHHHHHHHHHHHH
Confidence 2334555556665431 23344444444565444 44543 554 456666 6678999999988763
Q ss_pred ccccCCCCccccccccccc
Q psy11254 677 IAKHGEIGDAATKWVLPFT 695 (741)
Q Consensus 677 ~~~~~~~~~~a~~~l~~~~ 695 (741)
.+-.+++....+++...
T Consensus 181 --rgl~l~~~v~~yl~~~~ 197 (213)
T d1l8qa2 181 --FNLELRKEVIDYLLENT 197 (213)
T ss_dssp --TTCCCCHHHHHHHHHHC
T ss_pred --cCCCCCHHHHHHHHHhc
Confidence 33467777777766543
No 75
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=98.75 E-value=1.4e-08 Score=104.85 Aligned_cols=138 Identities=22% Similarity=0.393 Sum_probs=76.2
Q ss_pred ccccChHHHHHHHHHHhhccCCChHHHhhhC-CCCCCC-ceEEcCCCChHHHHHHHHHHhc---CCCceeeecccccchh
Q psy11254 171 SAIGGLSEQIRELREVIELPLLNPELFQRVG-ITPPKG-CLLYGPPGTGKTLLARAVASQL---DANFLKVVSSLFVTSK 245 (741)
Q Consensus 171 ~~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~-l~~~~G-vlL~Gp~GtGKTtL~r~ia~~l---~~~~~~v~~~~~~~~~ 245 (741)
..|.|.++.++.|.+.+..... ++. -.-|.+ ++|+||+|+|||.+|+.||..+ ...+..+..+.+....
T Consensus 23 ~~v~GQ~~ai~~v~~~i~~~~~------~l~~~~kp~~~~lf~Gp~G~GKt~lak~la~~l~~~~~~~~~~~~~~~~~~~ 96 (315)
T d1qvra3 23 KRVVGQDEAIRAVADAIRRARA------GLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKH 96 (315)
T ss_dssp HHSCSCHHHHHHHHHHHHHHGG------GCSCSSSCSEEEEEBSCSSSSHHHHHHHHHHHHHSSGGGEEEECTTTCCSSG
T ss_pred CeEeCHHHHHHHHHHHHHHHhc------CCCCCCCCceEEEEECCCcchHHHHHHHHHHHhcCCCcceEEEeccccccch
Confidence 3468999999999888754321 111 122344 6788999999999999999987 4445555432221110
Q ss_pred hHHHHHhhhhhhhcccccccccccCCCccchh---hhhcchHHHHHHHHHHHHHhcCCeEEEeccccccccccCCCCCCc
Q psy11254 246 EDMAILMGNQLKRRSTHHLEKTYFPFYSSAIV---DKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSA 322 (741)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l~~~~~~p~~~l 322 (741)
..+.++ ..|+|...... +......+.-+|++|||+|+.
T Consensus 97 --------------------------~~~~L~g~~~gyvG~~~~~~--l~~~~~~~p~~Vvl~DEieK~----------- 137 (315)
T d1qvra3 97 --------------------------AVSRLIGAPPGYVGYEEGGQ--LTEAVRRRPYSVILFDEIEKA----------- 137 (315)
T ss_dssp --------------------------GGGGC--------------C--HHHHHHHCSSEEEEESSGGGS-----------
T ss_pred --------------------------hhhhhcCCCCCCcCcccCCh--HHHHHHhCCCcEEEEehHhhc-----------
Confidence 001111 13555433221 222223344489999999985
Q ss_pred cHHHHHHHHHHHHhc--cC----CCCCCCeEEEEeeC
Q psy11254 323 DREIQRTLMELLNQM--DG----FDSLGQVKMIMATN 353 (741)
Q Consensus 323 D~~~~~~l~~lL~~l--~~----~~~~~~v~vI~at~ 353 (741)
++..+..|.+++..= .. ..+..+..+|++||
T Consensus 138 ~~~v~~~ll~~l~~g~~~~~~gr~v~~~~~i~i~tsn 174 (315)
T d1qvra3 138 HPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSN 174 (315)
T ss_dssp CHHHHHHHHHHHTTTEECCSSSCCEECTTEEEEEECC
T ss_pred CHHHHHHHHHHhccCceeCCCCcEecCcceEEEEecc
Confidence 345677777777431 11 01235677888887
No 76
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=98.72 E-value=3.3e-08 Score=106.55 Aligned_cols=44 Identities=41% Similarity=0.746 Sum_probs=37.4
Q ss_pred CCceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhhcc-ccch
Q psy11254 524 PKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK-YIGE 567 (741)
Q Consensus 524 ~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~~~-~~g~ 567 (741)
++++||+||+|||||.+|+.||+.++.||+.++++.+..- |+|+
T Consensus 49 ksNILliGPTGvGKTlLAr~LAk~l~VPFv~~daT~fTeaGYvG~ 93 (443)
T d1g41a_ 49 PKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGK 93 (443)
T ss_dssp CCCEEEECCTTSSHHHHHHHHHHHTTCCEEEEEGGGGC----CCC
T ss_pred cccEEEECCCCCCHHHHHHHHHHHhCCCEEEeecceeeecceeec
Confidence 5689999999999999999999999999999999887553 5553
No 77
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=98.64 E-value=3.2e-08 Score=103.26 Aligned_cols=132 Identities=14% Similarity=0.198 Sum_probs=76.0
Q ss_pred eEEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHcc------CCCC--CCCeEEEEeeCCC-CCCCccccCCCCcceE
Q psy11254 585 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD------GFDS--LGQVKMIMATNRP-DTLDPALLRPGRLDRK 655 (741)
Q Consensus 585 ~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~------g~~~--~~~v~vi~tTn~~-~~ld~al~rpgR~d~~ 655 (741)
.|+|+||+..+ .+.....+.+.|++-. |... .-++++|+|+|.. ..+.++++. ||+..
T Consensus 129 gvl~iDEi~~~-----------~~~~~~aLl~~me~~~v~i~r~g~~~~~p~~f~liaa~Np~~~~l~~~llD--Rf~~~ 195 (333)
T d1g8pa_ 129 GYLYIDECNLL-----------EDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLD--RFGLS 195 (333)
T ss_dssp EEEEETTGGGS-----------CHHHHHHHHHHHHHSEEEECCTTCCEEEECCEEEEEEECSCSCCCCHHHHT--TCSEE
T ss_pred cEeecccHHHH-----------HHHHHHHHhhhhcCCeEEecccCceecCCCCEEEEEecCccccccccchhh--hhcce
Confidence 59999999984 2344455555554321 1100 1256788888864 468889998 99999
Q ss_pred EEcCCCC-HHHHHHHHHHhhc----------------------------CccccCCCCcccccc-----cccccccchHH
Q psy11254 656 IEIPLPN-EQARLEILKIHAG----------------------------PIAKHGEIGDAATKW-----VLPFTAGGFIY 701 (741)
Q Consensus 656 i~~~~p~-~~~r~~i~~~~~~----------------------------~~~~~~~~~~~a~~~-----l~~~~s~gf~~ 701 (741)
+.++.|. ...+.++...... .+ ....+.+..... ......+.+.+
T Consensus 196 i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~v~~~~~~~~~~~~~~~~~~~~S~R~~ 274 (333)
T d1g8pa_ 196 VEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERL-PKVEAPNTALYDCAALCIALGSDGLRGE 274 (333)
T ss_dssp EECCCCCSHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHG-GGCBCCHHHHHHHHHHHHHSSSCSHHHH
T ss_pred eeccCcchhhHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHHHhhcc-cceecCHHHHHHHHHHHHHcCCCChHHH
Confidence 9998874 4555544432110 00 001111111111 11122355677
Q ss_pred HHHHHhhhhhhh-cCCCcccHHHHHHHHHH
Q psy11254 702 IATVSVIPELLE-DTSPKQTVKEILALLLG 730 (741)
Q Consensus 702 ~a~~~~~~~l~~-~~~~~~s~~~i~~~l~g 730 (741)
..+..+++.++. +.+...+.+||..++.=
T Consensus 275 ~~llrvArtiA~L~gr~~V~~~di~~a~~l 304 (333)
T d1g8pa_ 275 LTLLRSARALAALEGATAVGRDHLKRVATM 304 (333)
T ss_dssp HHHHHHHHHHHHHTTCSBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCCHHHHHHHHHH
Confidence 778888887764 35778999999875543
No 78
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=98.59 E-value=6.7e-08 Score=92.77 Aligned_cols=126 Identities=13% Similarity=0.254 Sum_probs=87.7
Q ss_pred CCceEEEcCCCCChHHHHHHHHHHhC------ccEEEEechhhhccccchHHHHHHHHHHHHHhc----CCeEEEEcccc
Q psy11254 524 PKGCLLYGPPGTGKTLLARAVASQLD------ANFLKVVSSAIVDKYIGESARLIREMFNYARNH----QPCIIFMDEID 593 (741)
Q Consensus 524 ~~~~ll~G~~G~GKt~l~~~~a~~~~------~~~~~v~~~~l~~~~~g~s~~~i~~~f~~a~~~----~p~Vl~iDE~d 593 (741)
+..++|+||||||||++|..++.... ++++.+.+.. +-+| -..+|.+.+.+... ..-|++|||+|
T Consensus 15 ~~~~l~~G~~g~gk~~~a~~l~~~i~~~~~~h~D~~~i~~~~---~~I~--Id~IR~i~~~~~~~~~~~~~KviIId~ad 89 (198)
T d2gnoa2 15 GISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEG---ENIG--IDDIRTIKDFLNYSPELYTRKYVIVHDCE 89 (198)
T ss_dssp SEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTEEEECCSS---SCBC--HHHHHHHHHHHTSCCSSSSSEEEEETTGG
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHhccccCCCCEEEEeCCc---CCCC--HHHHHHHHHHHhhCcccCCCEEEEEeCcc
Confidence 45799999999999999999998763 4577776542 2222 34567777766543 23599999999
Q ss_pred cccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCCccccCCCCcceEEEcCCCCHHHHHHHHHHh
Q psy11254 594 AIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673 (741)
Q Consensus 594 ~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld~al~rpgR~d~~i~~~~p~~~~r~~i~~~~ 673 (741)
.+- .. .-+.||.-|+ ++..++++|++||.++.+.|.+.. |. ..++|+.|.. -..++...
T Consensus 90 ~l~-----------~~---aqNaLLK~LE--EPp~~t~fiLit~~~~~ll~TI~S--RC-~~i~~~~p~~--~~~~~~~~ 148 (198)
T d2gnoa2 90 RMT-----------QQ---AANAFLKALE--EPPEYAVIVLNTRRWHYLLPTIKS--RV-FRVVVNVPKE--FRDLVKEK 148 (198)
T ss_dssp GBC-----------HH---HHHHTHHHHH--SCCTTEEEEEEESCGGGSCHHHHT--TS-EEEECCCCHH--HHHHHHHH
T ss_pred ccc-----------hh---hhhHHHHHHh--CCCCCceeeeccCChhhCHHHHhc--ce-EEEeCCCchH--HHHHHHHH
Confidence 862 23 3344555555 345688999999999999999987 77 5688887754 23344444
Q ss_pred hc
Q psy11254 674 AG 675 (741)
Q Consensus 674 ~~ 675 (741)
+.
T Consensus 149 ~~ 150 (198)
T d2gnoa2 149 IG 150 (198)
T ss_dssp HT
T ss_pred HH
Confidence 43
No 79
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=98.59 E-value=6e-08 Score=101.89 Aligned_cols=130 Identities=21% Similarity=0.338 Sum_probs=73.0
Q ss_pred cccChHHHHHHHHHHhhccCCCh------------------HHHhhhCCCCCCCceEEcCCCChHHHHHHHHHHhcCCCc
Q psy11254 172 AIGGLSEQIRELREVIELPLLNP------------------ELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANF 233 (741)
Q Consensus 172 ~i~Gl~~~k~~i~e~i~~~~~~~------------------~~~~~~~l~~~~GvlL~Gp~GtGKTtL~r~ia~~l~~~~ 233 (741)
.|.|.++.|+.+-..+.-.+.+. ..+.+.+ .++.+++|+||+|||||-|||.||..++.+|
T Consensus 18 ~ViGQd~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~-~p~~niLfiGPTGvGKTElAk~LA~~~~~~~ 96 (364)
T d1um8a_ 18 YVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVE-LSKSNILLIGPTGSGKTLMAQTLAKHLDIPI 96 (364)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTT-CCCCCEEEECCTTSSHHHHHHHHHHHTTCCE
T ss_pred eecChHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccccc-CCCcceeeeCCCCccHHHHHHHHHhhcccce
Confidence 47899999998876663211110 0111112 2345599999999999999999999998888
Q ss_pred eeeecccccchhhHHHHHhhhhhhhcccccccccccCCCccchhhhhcchHHHHHHHHHHHH----HhcCCeEEEecccc
Q psy11254 234 LKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYA----RNHQPCIIFMDEID 309 (741)
Q Consensus 234 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~A----~~~~P~ILllDEid 309 (741)
..+..+.+.... .++...|+ .++.++..+ .....+|+++||+|
T Consensus 97 ir~D~s~~~e~g------------------------------yvg~dv~~---~i~~l~~~~~~~v~~~~~~iv~lDEie 143 (364)
T d1um8a_ 97 AISDATSLTEAG------------------------------YVGEDVEN---ILTRLLQASDWNVQKAQKGIVFIDEID 143 (364)
T ss_dssp EEEEGGGCC--------------------------------------CTH---HHHHHHHHTTTCHHHHTTSEEEEETGG
T ss_pred eehhhhhcccch------------------------------hhHhhhcc---chhhhhhhchhHHHHhhcccchhhhhh
Confidence 888654332211 11111111 122233222 23456799999999
Q ss_pred ccccccCCCCC---CccHHHHHHHHHHHH
Q psy11254 310 AIGGRRFSEGT---SADREIQRTLMELLN 335 (741)
Q Consensus 310 ~l~~~~~~p~~---~lD~~~~~~l~~lL~ 335 (741)
++.+....... -..+..+..|++++.
T Consensus 144 K~~~~s~~~~~~~d~a~~~V~~~lLqild 172 (364)
T d1um8a_ 144 KISRLSENRSITRDVSGEGVQQALLKIVE 172 (364)
T ss_dssp GC--------------CHHHHHHHHHHHH
T ss_pred hhccccccccccccccchHHHHhhhhhhc
Confidence 98764322111 134566777777776
No 80
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=98.58 E-value=2.5e-10 Score=115.55 Aligned_cols=45 Identities=27% Similarity=0.465 Sum_probs=39.5
Q ss_pred CCCCCCceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhhccc
Q psy11254 520 GITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKY 564 (741)
Q Consensus 520 ~~~~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~~~~ 564 (741)
+...|++++|+||||||||++|+++|++++.+++.++++++....
T Consensus 28 ~~~~P~~ilL~GpPGtGKT~la~~la~~~~~~~~~i~~d~~~~~~ 72 (273)
T d1gvnb_ 28 AVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQH 72 (273)
T ss_dssp CCSSCEEEEEECCTTSCTHHHHHHHHHHTTTCCEEECTHHHHTTS
T ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHhhcceEEEecHHHHHHh
Confidence 345678899999999999999999999999999999998876543
No 81
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=98.56 E-value=8.8e-09 Score=103.79 Aligned_cols=64 Identities=23% Similarity=0.347 Sum_probs=47.9
Q ss_pred CCcccccChHHHHHHHHHHhhccCCChHHHhhhCCCCCCCceEEcCCCChHHHHHHHHHHhcCCCceeeeccc
Q psy11254 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSL 240 (741)
Q Consensus 168 ~~~~~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~GvlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~ 240 (741)
+.+++..+-+...+.+.+...-. .+...|+|++|+||||||||||+++||+.++.++..++.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~P~~ilL~GpPGtGKT~la~~la~~~~~~~~~i~~d~ 67 (273)
T d1gvnb_ 4 VNFTDKQFENRLNDNLEELIQGK---------KAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDT 67 (273)
T ss_dssp TCCCHHHHHHHHHHHHHHHHTTC---------CCCSSCEEEEEECCTTSCTHHHHHHHHHHTTTCCEEECTHH
T ss_pred cccChHHHHHHHHHHHHHHHhcc---------cCCCCCEEEEEECCCCCCHHHHHHHHHHHhhcceEEEecHH
Confidence 34666666666666665554421 14566889999999999999999999999999998887643
No 82
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=98.53 E-value=1.5e-07 Score=88.11 Aligned_cols=100 Identities=17% Similarity=0.357 Sum_probs=60.4
Q ss_pred ceEEEcCCCCChHHHHHHHHHHhCccEEEEechh-----------------------h----------hcccc-c-----
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQLDANFLKVVSSA-----------------------I----------VDKYI-G----- 566 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~-----------------------l----------~~~~~-g----- 566 (741)
+++++||||||||||++.+++.++++...+.... + ..++. .
T Consensus 2 ki~I~G~~G~GKSTLl~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (178)
T d1ye8a1 2 KIIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSSKFFTSKKLVGSYGVNVQYFE 81 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHGGGEEEEEEEEEC------CCEEEEEETTCCEEEEEETTCCCSSEETTEEECHHHHH
T ss_pred EEEEECCCCcHHHHHHHHHHhcCCCCcceEEECCcchHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhhhhhhcCcchhh
Confidence 4899999999999999999999876532221110 0 00000 0
Q ss_pred -hHHHHHHHHHHHHHhcCCeEEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCC
Q psy11254 567 -ESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPD 640 (741)
Q Consensus 567 -~s~~~i~~~f~~a~~~~p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~ 640 (741)
......+..+..+....|++|++||+.... ..+......+.+++.. .+..+|++++...
T Consensus 82 ~~~~~~~~~~l~~~~~~~~~vlllDE~~~~~--------~~~~~~~~~l~~~l~~-------~~~~il~~~h~~~ 141 (178)
T d1ye8a1 82 ELAIPILERAYREAKKDRRKVIIIDEIGKME--------LFSKKFRDLVRQIMHD-------PNVNVVATIPIRD 141 (178)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEEEECCCSTTG--------GGCHHHHHHHHHHHTC-------TTSEEEEECCSSC
T ss_pred hhhhhhHHHHHHHHHhcCCCceeecCCCccc--------hhhHHHHHHHHHHhcc-------CCCEEEEEEccHH
Confidence 122345677778888899999999976432 1223334444444432 1344777777654
No 83
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=98.41 E-value=6.4e-07 Score=88.88 Aligned_cols=184 Identities=20% Similarity=0.285 Sum_probs=104.3
Q ss_pred CceEEEcCCCCChHHHHHHHHHHhC---ccEEEEechhhhccc-----cch-------HHHHHHHHHHHHHhcCCeEEEE
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQLD---ANFLKVVSSAIVDKY-----IGE-------SARLIREMFNYARNHQPCIIFM 589 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~~---~~~~~v~~~~l~~~~-----~g~-------s~~~i~~~f~~a~~~~p~Vl~i 589 (741)
..++++|++|||||++|++|..... .+++.+++..+.... +|. .......+|+.|.. ..|||
T Consensus 24 ~pvlI~Ge~GtGK~~~A~~ih~~s~~~~~~~~~~~~~~~~~~~~~~~lfg~~~~~~~~~~~~~~g~l~~a~g---GtL~l 100 (247)
T d1ny5a2 24 CPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADG---GTLFL 100 (247)
T ss_dssp SCEEEECSTTSSHHHHHHHHHHHSTTTTSCEEEEETTTSCHHHHHHHHHCBCTTSSTTCCSCBCCHHHHTTT---SEEEE
T ss_pred CCEEEECCCCcCHHHHHHHHHHhcCCcccccccchhhhhhhcccHHHhcCcccCCcCCcccccCCHHHccCC---CEEEE
Confidence 4589999999999999999987653 457777776442211 010 00001224555544 48999
Q ss_pred cccccccCCCCCCCCcccHHHHHHHHHHHHHccC--CCC----CCCeEEEEeeCCCCCCCccccCCCCcc---------e
Q psy11254 590 DEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG--FDS----LGQVKMIMATNRPDTLDPALLRPGRLD---------R 654 (741)
Q Consensus 590 DE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g--~~~----~~~v~vi~tTn~~~~ld~al~rpgR~d---------~ 654 (741)
||+|.+ +...+..+.++|..-.- ..+ ..++-+|++|+.+- .++...|+|+ .
T Consensus 101 ~~i~~L-----------~~~~Q~~L~~~l~~~~~~~~~~~~~~~~~~RlI~~s~~~l---~~l~~~~~f~~~L~~~l~~~ 166 (247)
T d1ny5a2 101 DEIGEL-----------SLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNI---KELVKEGKFREDLYYRLGVI 166 (247)
T ss_dssp ESGGGC-----------CHHHHHHHHHHHHHSEECCBTCCSBEECCCEEEEEESSCH---HHHHHTTSSCHHHHHHHTTE
T ss_pred eChHhC-----------CHHHHHHHHHHHHhCCEEECCCCCceecCeEEEEecCCCH---HHHHHcCCCcHHHHhhcCee
Confidence 999986 34556777777764221 111 11466888887641 1222234443 3
Q ss_pred EEEcCCCC--HHHHHHHHHHhhcCcccc-----CCCCcccccccccccccch--HHHHHHHhhhhhhhcCCCcccHHHHH
Q psy11254 655 KIEIPLPN--EQARLEILKIHAGPIAKH-----GEIGDAATKWVLPFTAGGF--IYIATVSVIPELLEDTSPKQTVKEIL 725 (741)
Q Consensus 655 ~i~~~~p~--~~~r~~i~~~~~~~~~~~-----~~~~~~a~~~l~~~~s~gf--~~~a~~~~~~~l~~~~~~~~s~~~i~ 725 (741)
.|.+|+.. .++...|++.++..+... ..++..+...+....=.|- .-.+++. +.++..+...++.++|-
T Consensus 167 ~i~lPpLreR~~Di~~l~~~~l~~~~~~~~~~~~~ls~~al~~L~~~~WPGNl~EL~~~l~--~a~~~~~~~~I~~~dl~ 244 (247)
T d1ny5a2 167 EIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRELKNVIE--RAVLFSEGKFIDRGELS 244 (247)
T ss_dssp EEECCCGGGCHHHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHSCCTTHHHHHHHHHH--HHHHHCCSSEECHHHHH
T ss_pred eecCCChhhchhhHhhhhhhhhhhhhhhcCCCCCCCCHHHHHHHHhCCCCCHHHHHHHHHH--HHHHhCCCCeECHHHcc
Confidence 57888774 456667777776644322 2355666665555443342 2222222 22345566677888776
Q ss_pred HH
Q psy11254 726 AL 727 (741)
Q Consensus 726 ~~ 727 (741)
++
T Consensus 245 ~l 246 (247)
T d1ny5a2 245 CL 246 (247)
T ss_dssp HH
T ss_pred cc
Confidence 54
No 84
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=98.41 E-value=3.5e-07 Score=87.63 Aligned_cols=116 Identities=13% Similarity=0.212 Sum_probs=75.7
Q ss_pred CCceEEcCCCChHHHHHHHHHHhcCC------CceeeecccccchhhHHHHHhhhhhhhcccccccccccCCCccchhhh
Q psy11254 206 KGCLLYGPPGTGKTLLARAVASQLDA------NFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDK 279 (741)
Q Consensus 206 ~GvlL~Gp~GtGKTtL~r~ia~~l~~------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 279 (741)
..++|+||||||||++++.++..+.. ++..+.... +
T Consensus 16 ~~~l~~G~~g~gk~~~a~~l~~~i~~~~~~h~D~~~i~~~~--------------------------------------~ 57 (198)
T d2gnoa2 16 ISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEG--------------------------------------E 57 (198)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTEEEECCSS--------------------------------------S
T ss_pred ceEEEECCCCCCHHHHHHHHHHHHhccccCCCCEEEEeCCc--------------------------------------C
Confidence 35899999999999999999986632 233322100 0
Q ss_pred hcchHHHHHHHHHHHHH----hcCCeEEEeccccccccccCCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCC
Q psy11254 280 YIGESARLIREMFNYAR----NHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRP 355 (741)
Q Consensus 280 ~~G~~~~~v~~~~~~A~----~~~P~ILllDEid~l~~~~~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~ 355 (741)
-.| -..+|++...+. ..+..|++|||+|.+ ..+.+..|+..|.+- ..++.+|++|+++
T Consensus 58 ~I~--Id~IR~i~~~~~~~~~~~~~KviIId~ad~l-----------~~~aqNaLLK~LEEP-----p~~t~fiLit~~~ 119 (198)
T d2gnoa2 58 NIG--IDDIRTIKDFLNYSPELYTRKYVIVHDCERM-----------TQQAANAFLKALEEP-----PEYAVIVLNTRRW 119 (198)
T ss_dssp CBC--HHHHHHHHHHHTSCCSSSSSEEEEETTGGGB-----------CHHHHHHTHHHHHSC-----CTTEEEEEEESCG
T ss_pred CCC--HHHHHHHHHHHhhCcccCCCEEEEEeCcccc-----------chhhhhHHHHHHhCC-----CCCceeeeccCCh
Confidence 011 122344444332 234579999999876 334566666666543 2578999999999
Q ss_pred CCCCccccCCCccceeeecCCCCHH
Q psy11254 356 DTLDPALLRPGRLDRKIEIPLPNEQ 380 (741)
Q Consensus 356 ~~ld~al~r~gr~d~~i~~~~p~~~ 380 (741)
+.+.|.+.. |. ..+.++.|...
T Consensus 120 ~~ll~TI~S--RC-~~i~~~~p~~~ 141 (198)
T d2gnoa2 120 HYLLPTIKS--RV-FRVVVNVPKEF 141 (198)
T ss_dssp GGSCHHHHT--TS-EEEECCCCHHH
T ss_pred hhCHHHHhc--ce-EEEeCCCchHH
Confidence 999998887 54 56778777643
No 85
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=98.41 E-value=4e-07 Score=88.31 Aligned_cols=130 Identities=22% Similarity=0.388 Sum_probs=72.3
Q ss_pred CceEEcCCCChHHHHHHHHHHhcCCCceeeecccccchhhHHHHHhhhhhhhcccccccccccCCCccchhhhhcchHHH
Q psy11254 207 GCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESAR 286 (741)
Q Consensus 207 GvlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~ 286 (741)
.+.|+||+|||||.|+++++.........+.. +... +.. ......+..+...
T Consensus 38 ~l~l~G~~G~GKTHLl~A~~~~~~~~~~~~~~---~~~~-~~~------------------------~~~~~~~~~~~~~ 89 (213)
T d1l8qa2 38 PIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIY---SSAD-DFA------------------------QAMVEHLKKGTIN 89 (213)
T ss_dssp SEEEECSSSSSHHHHHHHHHHHHHHTTCCEEE---EEHH-HHH------------------------HHHHHHHHHTCHH
T ss_pred cEEEECCCCCcHHHHHHHHHHHhccCccceEE---echH-HHH------------------------HHHHHHHHccchh
Confidence 37899999999999999999987543222211 1110 000 0001111111111
Q ss_pred HHHHHHHHHHhcCCeEEEeccccccccccCCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeC-CCCCCC---ccc
Q psy11254 287 LIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATN-RPDTLD---PAL 362 (741)
Q Consensus 287 ~v~~~~~~A~~~~P~ILllDEid~l~~~~~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~-~~~~ld---~al 362 (741)
.+ +.. ..+.++|+||++|.+.+ .+..+..|..+++.+.. .+..+|++++ .|..++ +.+
T Consensus 90 ~~---~~~--~~~~dll~iDDi~~i~~---------~~~~~~~lf~lin~~~~----~~~~iiits~~~p~~l~~~~~dL 151 (213)
T d1l8qa2 90 EF---RNM--YKSVDLLLLDDVQFLSG---------KERTQIEFFHIFNTLYL----LEKQIILASDRHPQKLDGVSDRL 151 (213)
T ss_dssp HH---HHH--HHTCSEEEEECGGGGTT---------CHHHHHHHHHHHHHHHH----TTCEEEEEESSCGGGCTTSCHHH
T ss_pred hH---HHH--HhhccchhhhhhhhhcC---------chHHHHHHHHHHHHHhh----ccceEEEecCCcchhccccchHH
Confidence 11 111 23567999999998853 34556777888887654 3445666665 444333 334
Q ss_pred cCCCcc--ceeeecCCCCHHHHHhc
Q psy11254 363 LRPGRL--DRKIEIPLPNEQARLAH 385 (741)
Q Consensus 363 ~r~gr~--d~~i~~~~p~~~~r~~i 385 (741)
.. |+ ...+.++ |+.+.|..+
T Consensus 152 ~S--RL~~g~~~~i~-p~d~~~~~i 173 (213)
T d1l8qa2 152 VS--RFEGGILVEIE-LDNKTRFKI 173 (213)
T ss_dssp HH--HHHTSEEEECC-CCHHHHHHH
T ss_pred HH--HhhCceEEEEC-CCcHHHHHH
Confidence 33 44 2455665 566777776
No 86
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=98.39 E-value=3.5e-07 Score=89.16 Aligned_cols=121 Identities=17% Similarity=0.229 Sum_probs=78.3
Q ss_pred hcCCCCCCceEEEcCCCCChHHHHHHHHHHhCccEEEE--echhh-----------------------------------
Q psy11254 518 RVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV--VSSAI----------------------------------- 560 (741)
Q Consensus 518 ~~~~~~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v--~~~~l----------------------------------- 560 (741)
++.+..+..+.|.||+|||||||++++++...+.-..+ .+.++
T Consensus 25 sl~i~~Ge~~~iiG~sGsGKSTLl~~i~gl~~p~sG~I~~~g~~i~~~~~~~~~~~r~~~ig~v~Q~~~l~~~~tv~eni 104 (230)
T d1l2ta_ 25 NLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENV 104 (230)
T ss_dssp EEEECTTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECTTCCHHHHHHHHHHHEEEECTTCCCCTTSCHHHHH
T ss_pred EEEEcCCCEEEEECCCCCCcchhhHhccCCCCCCcceeEECCEEcCcCChhhcchhhcceEEEEecchhhCcCccHHHHH
Confidence 34567788899999999999999999998775542222 11100
Q ss_pred ----------------------------------hccccc--hHHHHHHHHHHHHHhcCCeEEEEcccccccCCCCCCCC
Q psy11254 561 ----------------------------------VDKYIG--ESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGT 604 (741)
Q Consensus 561 ----------------------------------~~~~~g--~s~~~i~~~f~~a~~~~p~Vl~iDE~d~~~~~r~~~~~ 604 (741)
.+.|+. ..++.-|-.+.+|....|.+|++||..+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~p~~LSGGqkQRvaIAraL~~~P~lLllDEPTs---------- 174 (230)
T d1l2ta_ 105 ELPLIFKYRGAMSGEERRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTG---------- 174 (230)
T ss_dssp HHHHHTCCSSCCCHHHHHHHHHHHHHHTTCCGGGTTCCGGGSCHHHHHHHHHHHHHTTCCSEEEEESTTT----------
T ss_pred hHHHHHhccCCCCHHHHHHHHHHHHHhhchhhhhhcCChhhCCHHHHHHHHHHhhhhcCCCEEEecCCcc----------
Confidence 001111 1133345666677778899999999654
Q ss_pred cccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCCccccCCCCcceEEEc
Q psy11254 605 SADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEI 658 (741)
Q Consensus 605 ~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld~al~rpgR~d~~i~~ 658 (741)
+-|+.....+.++|..+. ...++-+|++||+++. .+ ..|+++.+
T Consensus 175 ~LD~~~~~~i~~~l~~l~---~~~g~tii~vTHd~~~-----a~--~~drv~~m 218 (230)
T d1l2ta_ 175 ALDSKTGEKIMQLLKKLN---EEDGKTVVVVTHDINV-----AR--FGERIIYL 218 (230)
T ss_dssp TSCHHHHHHHHHHHHHHH---HTTCCEEEEECSCHHH-----HT--TSSEEEEE
T ss_pred ccCHHHHHHHHHHHHHHH---HhhCCEEEEECCCHHH-----HH--hCCEEEEE
Confidence 467777888888888763 1224558888886432 23 45666655
No 87
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=98.36 E-value=1e-06 Score=87.47 Aligned_cols=119 Identities=20% Similarity=0.323 Sum_probs=77.4
Q ss_pred cCCCCCCceEEEcCCCCChHHHHHHHHHHhCccEEEEe--chh-------------------------------------
Q psy11254 519 VGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV--SSA------------------------------------- 559 (741)
Q Consensus 519 ~~~~~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~--~~~------------------------------------- 559 (741)
+.+.++..+.|+||+|||||||++++++.+.+.-..+. +.+
T Consensus 36 l~i~~Ge~iaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~n~~~~~~~ 115 (253)
T d3b60a1 36 LKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTE 115 (253)
T ss_dssp EEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEETTEETTTBCHHHHHHTEEEECSSCCCCSSBHHHHHHTTTTS
T ss_pred EEEcCCCEEEEECCCCChHHHHHHHHhcccCCCccEEEECCcccchhhhhhhhheEEEEeeccccCCcchhhhhhhcCcc
Confidence 45678888999999999999999999998865433321 100
Q ss_pred ------------------hh-------ccccc------hHHHHHHHHHHHHHhcCCeEEEEcccccccCCCCCCCCcccH
Q psy11254 560 ------------------IV-------DKYIG------ESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADR 608 (741)
Q Consensus 560 ------------------l~-------~~~~g------~s~~~i~~~f~~a~~~~p~Vl~iDE~d~~~~~r~~~~~~~~~ 608 (741)
++ ...++ ..+++-|-.+.+|....|.||++||+.+ +-|.
T Consensus 116 ~~~~~~i~~a~~~~~l~~~i~~l~~gl~t~~~~~~~~LSGGqkQRvaiARal~~~p~ililDEpts----------~LD~ 185 (253)
T d3b60a1 116 EYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEATS----------ALDT 185 (253)
T ss_dssp CCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSCHHHHHHHHHHHHHHHCCSEEEEETTTS----------SCCH
T ss_pred cCCHHHHHHHHHHHhHHHHHHhccccchhhhcCCCCCcCHHHHHHHHHHHHHhcCCCEEEeccccc----------cCCH
Confidence 00 00111 1233445566677777899999999765 4566
Q ss_pred HHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCCccccCCCCcceEEEcC
Q psy11254 609 EIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 659 (741)
Q Consensus 609 ~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld~al~rpgR~d~~i~~~ 659 (741)
.....+.++|..+.. +..+|+.||+++.+ + .+|+++.+.
T Consensus 186 ~~~~~i~~~l~~l~~-----~~Tvi~itH~l~~~-----~--~~D~v~vl~ 224 (253)
T d3b60a1 186 ESERAIQAALDELQK-----NRTSLVIAHRLSTI-----E--QADEIVVVE 224 (253)
T ss_dssp HHHHHHHHHHHHHHT-----TSEEEEECSCGGGT-----T--TCSEEEEEE
T ss_pred HHHHHHHHHHHHhcc-----CCEEEEEECCHHHH-----H--hCCEEEEEE
Confidence 777778888877642 23467778876543 3 456665553
No 88
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=98.31 E-value=4.9e-07 Score=88.96 Aligned_cols=109 Identities=18% Similarity=0.270 Sum_probs=73.7
Q ss_pred cCCCCCCceEEEcCCCCChHHHHHHHHHHhCccEEEE--echhh------------------------------------
Q psy11254 519 VGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV--VSSAI------------------------------------ 560 (741)
Q Consensus 519 ~~~~~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v--~~~~l------------------------------------ 560 (741)
+.+.++..+.++||+|||||||++++++.+.+.-..+ ++.++
T Consensus 24 l~i~~Ge~vaIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Ti~eNi~~~~~~ 103 (241)
T d2pmka1 24 LSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIIDNISLANPG 103 (241)
T ss_dssp EEEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCTTSBHHHHHCTTSTT
T ss_pred EEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCCCCEEEECCEEecccchhhhhceEEEEecccccCCccccccccccCcc
Confidence 4567888999999999999999999999886543222 11100
Q ss_pred ------------------h-------ccccc------hHHHHHHHHHHHHHhcCCeEEEEcccccccCCCCCCCCcccHH
Q psy11254 561 ------------------V-------DKYIG------ESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADRE 609 (741)
Q Consensus 561 ------------------~-------~~~~g------~s~~~i~~~f~~a~~~~p~Vl~iDE~d~~~~~r~~~~~~~~~~ 609 (741)
+ ...+| ..+++-|-.+.+|....|.||++||+.+ +-|..
T Consensus 104 ~~~~~~~~~~~~~~~~~~i~~~~~~~~t~i~~~g~~LSGGq~QRvalARal~~~p~ililDEpts----------~LD~~ 173 (241)
T d2pmka1 104 MSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATS----------ALDYE 173 (241)
T ss_dssp CCHHHHHHHHHHHTCHHHHTTSTTGGGSBCSTTTTCCCHHHHHHHHHHHHHTTCCSEEEECCCCS----------CCCHH
T ss_pred ccHHHHHHHHHHHhhHHHHHhhhcchhhhcCCCCCccCHHHHHHHhhhhhhhcccchhhhhCCcc----------ccCHH
Confidence 0 00011 2234456677777778999999999776 35666
Q ss_pred HHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCC
Q psy11254 610 IQRTLMELLNQMDGFDSLGQVKMIMATNRPDTL 642 (741)
Q Consensus 610 ~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~l 642 (741)
..+.+.+.|..+.. +..+|+.||+++.+
T Consensus 174 ~~~~i~~~l~~l~~-----~~Tvi~itH~l~~~ 201 (241)
T d2pmka1 174 SEHVIMRNMHKICK-----GRTVIIIAHRLSTV 201 (241)
T ss_dssp HHHHHHHHHHHHHT-----TSEEEEECSSGGGG
T ss_pred HHHHHHHHHHHHhC-----CCEEEEEECCHHHH
Confidence 67777777777642 23478889987644
No 89
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=98.29 E-value=3.8e-07 Score=88.94 Aligned_cols=127 Identities=18% Similarity=0.225 Sum_probs=74.0
Q ss_pred cCCCCCCceEEEcCCCCChHHHHHHHHHHhCccEEEE--echhhh-----------------------------------
Q psy11254 519 VGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV--VSSAIV----------------------------------- 561 (741)
Q Consensus 519 ~~~~~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v--~~~~l~----------------------------------- 561 (741)
+.+.++.-+.|.||||||||||++++++...+.-..+ .+.++.
T Consensus 21 l~i~~Gei~~liGpsGsGKSTLl~~i~Gl~~p~sG~I~i~g~~i~~~~~~~r~ig~v~Q~~~l~~~~tv~eni~~~~~~~ 100 (232)
T d2awna2 21 LDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLA 100 (232)
T ss_dssp EEECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEESSSCCTTSCGGGTCEEEECSSCCC-----------------
T ss_pred EEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCCEEEECCEECCCCchhhceeeeeccccccccchhHHHHHHHHHHHc
Confidence 4567788899999999999999999999876543333 111100
Q ss_pred ------------------------ccccc--hHHHHHHHHHHHHHhcCCeEEEEcccccccCCCCCCCCcccHHHHHHHH
Q psy11254 562 ------------------------DKYIG--ESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM 615 (741)
Q Consensus 562 ------------------------~~~~g--~s~~~i~~~f~~a~~~~p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~ 615 (741)
.+++. ..++.-|-.+.+|....|.||++||.-+ +-|+...+.+.
T Consensus 101 ~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSGGqkQRvaiAraL~~~P~illlDEPts----------~LD~~~~~~i~ 170 (232)
T d2awna2 101 GAKKEVINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLS----------NLDAALRVQMR 170 (232)
T ss_dssp ----CHHHHHHHHHHHHC---------------------CHHHHHHTCCSEEEEESTTT----------TSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCC----------CCCHHHHHHHH
Confidence 00000 0112224455566668899999999654 45666666666
Q ss_pred HHHHHccCCCCCCCeEEEEeeCCCCC----CCc-cccCCCCcceEEEcCCC
Q psy11254 616 ELLNQMDGFDSLGQVKMIMATNRPDT----LDP-ALLRPGRLDRKIEIPLP 661 (741)
Q Consensus 616 ~lL~~~~g~~~~~~v~vi~tTn~~~~----ld~-al~rpgR~d~~i~~~~p 661 (741)
.+|..+.. ..+.-+|++||..+. -|. .+++-|| ++....|
T Consensus 171 ~~l~~l~~---~~g~tii~vTHd~~~a~~~~dri~vm~~G~---iv~~G~~ 215 (232)
T d2awna2 171 IEISRLHK---RLGRTMIYVTHDQVEAMTLADKIVVLDAGR---VAQVGKP 215 (232)
T ss_dssp HHHHHHHH---HSCCEEEEEESCHHHHHHHCSEEEEEETTE---EEEEECH
T ss_pred HHHHHHHH---hcCCEEEEEeCCHHHHHHhCCEEEEEECCE---EEEEeCH
Confidence 66655421 113458888987653 243 3455553 4455444
No 90
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=98.27 E-value=6.4e-07 Score=87.74 Aligned_cols=109 Identities=18% Similarity=0.227 Sum_probs=70.7
Q ss_pred cCCCCCCceEEEcCCCCChHHHHHHHHHHhCccEEEE--echhh------------------------------------
Q psy11254 519 VGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV--VSSAI------------------------------------ 560 (741)
Q Consensus 519 ~~~~~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v--~~~~l------------------------------------ 560 (741)
+.+.++.-+.|.|||||||||+++++++...+.-..+ .+.++
T Consensus 24 l~i~~Ge~~~liG~sGaGKSTll~~i~gl~~p~sG~I~~~g~~i~~~~~~~~~~~~~r~ig~v~Q~~~L~~~ltV~eni~ 103 (240)
T d1g2912 24 LEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIFVPPKDRDIAMVFQSYALYPHMTVYDNIA 103 (240)
T ss_dssp EEEETTCEEEEECSTTSSHHHHHHHHHTSSCCSEEEEEETTEEEEEGGGTEECCGGGSSEEEECSCCCCCTTSCHHHHHH
T ss_pred eEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCCEEEECCEEecccchhhhcccccccceecccchhhcchhhhhHhhh
Confidence 3456778899999999999999999999886542222 11110
Q ss_pred -----------------------------hccccc--hHHHHHHHHHHHHHhcCCeEEEEcccccccCCCCCCCCcccHH
Q psy11254 561 -----------------------------VDKYIG--ESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADRE 609 (741)
Q Consensus 561 -----------------------------~~~~~g--~s~~~i~~~f~~a~~~~p~Vl~iDE~d~~~~~r~~~~~~~~~~ 609 (741)
..+|+. ..+++-|-.+.+|....|.||++||..+ +-|+.
T Consensus 104 ~~~~~~~~~~~e~~~~v~~~l~~~~l~~~~~~~p~~LSGGqkQRv~IAraL~~~P~iLllDEPt~----------~LD~~ 173 (240)
T d1g2912 104 FPLKLRKVPRQEIDQRVREVAELLGLTELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLS----------NLDAK 173 (240)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHTCGGGTTCCGGGSCHHHHHHHHHHHHHHTCCSEEEEECTTT----------TSCHH
T ss_pred hhHHHcCCCHHHHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCc----------ccCHH
Confidence 011111 1233336677777788999999999665 45666
Q ss_pred HHHHHHHHHHHccCCCCCCCeEEEEeeCCCC
Q psy11254 610 IQRTLMELLNQMDGFDSLGQVKMIMATNRPD 640 (741)
Q Consensus 610 ~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~ 640 (741)
.+..+.++|..+.. ..++-+|++||+.+
T Consensus 174 ~~~~i~~~l~~l~~---~~g~tvi~vTHd~~ 201 (240)
T d1g2912 174 LRVRMRAELKKLQR---QLGVTTIYVTHDQV 201 (240)
T ss_dssp HHHHHHHHHHHHHH---HHTCEEEEEESCHH
T ss_pred HHHHHHHHHHHHHh---ccCCEEEEEcCCHH
Confidence 66666666665421 01344899998865
No 91
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=98.27 E-value=3.9e-07 Score=88.58 Aligned_cols=109 Identities=18% Similarity=0.250 Sum_probs=72.5
Q ss_pred cCCCCCCceEEEcCCCCChHHHHHHHHHHhCccEEEE--echhhh-----------------------------------
Q psy11254 519 VGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV--VSSAIV----------------------------------- 561 (741)
Q Consensus 519 ~~~~~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v--~~~~l~----------------------------------- 561 (741)
+.+.++.-+.|.|||||||||+++++++...+.-..+ .+.++.
T Consensus 21 ~~i~~Ge~~~liGpsGaGKSTll~~l~Gl~~p~sG~I~~~G~~i~~~~~~~r~ig~v~Q~~~l~~~~tV~enl~~~~~~~ 100 (229)
T d3d31a2 21 LKVESGEYFVILGPTGAGKTLFLELIAGFHVPDSGRILLDGKDVTDLSPEKHDIAFVYQNYSLFPHMNVKKNLEFGMRMK 100 (229)
T ss_dssp EEECTTCEEEEECCCTHHHHHHHHHHHTSSCCSEEEEEETTEECTTSCHHHHTCEEECTTCCCCTTSCHHHHHHHHHHHH
T ss_pred EEECCCCEEEEECCCCCcHHHHHHHHhcCcCCCCCEEEEccEeccccchhHhcceeeccccccCccccHHHHHHHHHhhc
Confidence 4567778899999999999999999999886653332 221110
Q ss_pred ---------------------ccccc--hHHHHHHHHHHHHHhcCCeEEEEcccccccCCCCCCCCcccHHHHHHHHHHH
Q psy11254 562 ---------------------DKYIG--ESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 618 (741)
Q Consensus 562 ---------------------~~~~g--~s~~~i~~~f~~a~~~~p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL 618 (741)
.++++ ..++.-|-.+.+|....|.||++||..+ +-|+.....+..++
T Consensus 101 ~~~~~~~~~~~l~~~~l~~~~~~~~~~LSGG~~QRvaiAraL~~~P~iLllDEPts----------~LD~~~~~~i~~~l 170 (229)
T d3d31a2 101 KIKDPKRVLDTARDLKIEHLLDRNPLTLSGGEQQRVALARALVTNPKILLLDEPLS----------ALDPRTQENAREML 170 (229)
T ss_dssp CCCCHHHHHHHHHHTTCTTTTTSCGGGSCHHHHHHHHHHHHTTSCCSEEEEESSST----------TSCHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHhcchhhHhCChhhCCHHHhcchhhhhhhhccCCceeecCCCc----------CCCHHHHHHHHHHH
Confidence 11111 1233346677777778999999999665 45666667777777
Q ss_pred HHccCCCCCCCeEEEEeeCCCC
Q psy11254 619 NQMDGFDSLGQVKMIMATNRPD 640 (741)
Q Consensus 619 ~~~~g~~~~~~v~vi~tTn~~~ 640 (741)
..+.. ..++-+|++||+++
T Consensus 171 ~~l~~---~~g~tii~vtHd~~ 189 (229)
T d3d31a2 171 SVLHK---KNKLTVLHITHDQT 189 (229)
T ss_dssp HHHHH---HTTCEEEEEESCHH
T ss_pred HHHHh---cCCcEEEEEcCCHH
Confidence 66521 12445899998865
No 92
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=98.26 E-value=9.1e-08 Score=103.00 Aligned_cols=69 Identities=30% Similarity=0.432 Sum_probs=50.3
Q ss_pred ccChHHHHHHHHHHhhccCCChHHHhhhCCC-CCCCceEEcCCCChHHHHHHHHHHhcCCCceeeecccc
Q psy11254 173 IGGLSEQIRELREVIELPLLNPELFQRVGIT-PPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLF 241 (741)
Q Consensus 173 i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~-~~~GvlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~ 241 (741)
|.|.++.|+.|--.+.-++.+..+-....-. .++++||+||+|||||.|||.||+.++.+|..+.+..+
T Consensus 16 VvGQ~~AKk~lsvav~nhyrR~~~~~~~~~ei~ksNILliGPTGvGKTlLAr~LAk~l~VPFv~~daT~f 85 (443)
T d1g41a_ 16 IIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKF 85 (443)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHSCTTTTTTCCCCCEEEECCTTSSHHHHHHHHHHHTTCCEEEEEGGGG
T ss_pred ccCcHHHHHHHHHHHHHHHHHhhcccccccccccccEEEECCCCCCHHHHHHHHHHHhCCCEEEeeccee
Confidence 7899999999877775433211111111111 35679999999999999999999999999999887543
No 93
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.25 E-value=9.3e-07 Score=87.59 Aligned_cols=121 Identities=16% Similarity=0.246 Sum_probs=77.9
Q ss_pred cCCCCCCceEEEcCCCCChHHHHHHHHHHhCccEEEE--echhhh-----------------------------------
Q psy11254 519 VGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV--VSSAIV----------------------------------- 561 (741)
Q Consensus 519 ~~~~~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v--~~~~l~----------------------------------- 561 (741)
+.+.++..+.++||+|||||||++++++.+.+.-..+ ++.++.
T Consensus 35 l~i~~Ge~vaivG~sGsGKSTLl~li~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~g~~~ 114 (251)
T d1jj7a_ 35 FTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGKPLPQYEHRYLHRQVAAVGQEPQVFGRSLQENIAYGLTQ 114 (251)
T ss_dssp EEECTTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEEGGGBCHHHHHHHEEEECSSCCCCSSBHHHHHHCSCSS
T ss_pred EEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCcCEEEECCEecchhhhHHHHHHhhhccccccccCcchhhhhhhhhcc
Confidence 4567888999999999999999999998876542222 111000
Q ss_pred ---------------------------ccccc------hHHHHHHHHHHHHHhcCCeEEEEcccccccCCCCCCCCcccH
Q psy11254 562 ---------------------------DKYIG------ESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADR 608 (741)
Q Consensus 562 ---------------------------~~~~g------~s~~~i~~~f~~a~~~~p~Vl~iDE~d~~~~~r~~~~~~~~~ 608 (741)
...++ ..+++-|-.+.+|....|.||++||+.+ +-|.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~i~~~~~~LSGGqkQRvaiARal~~~p~ililDEpTs----------~LD~ 184 (251)
T d1jj7a_ 115 KPTMEEITAAAVKSGAHSFISGLPQGYDTEVDEAGSQLSGGQRQAVALARALIRKPCVLILDDATS----------ALDA 184 (251)
T ss_dssp CCCHHHHHHHHHHHTCHHHHHTSTTGGGCBCCSSCSSSCHHHHHHHHHHHHHTTCCSEEEEESTTT----------TCCH
T ss_pred cchHHHHHHHHHHHHHHHHHHhccccchhhHhccCccCChhHceEEEEeeccccCCcEEEecCcCc----------ccCh
Confidence 00011 1234456777777778999999999765 3566
Q ss_pred HHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCCccccCCCCcceEEEcC
Q psy11254 609 EIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 659 (741)
Q Consensus 609 ~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld~al~rpgR~d~~i~~~ 659 (741)
.....+.++|..+.. ..+.-+|+.||+.+.+ + ..|+++.+.
T Consensus 185 ~~~~~i~~~l~~l~~---~~~~Tvi~itH~l~~~-----~--~aDrI~vl~ 225 (251)
T d1jj7a_ 185 NSQLQVEQLLYESPE---RYSRSVLLITQHLSLV-----E--QADHILFLE 225 (251)
T ss_dssp HHHHHHHHHHHTCGG---GGGCEEEEECSCHHHH-----H--TCSEEEEEE
T ss_pred hhHHHHHHHHHHHhh---hcCCEEEEEeCCHHHH-----H--hCCEEEEEE
Confidence 666777777765531 1234588888875432 2 456655543
No 94
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=98.24 E-value=7.2e-07 Score=87.26 Aligned_cols=109 Identities=20% Similarity=0.235 Sum_probs=71.1
Q ss_pred cCCCCCCceEEEcCCCCChHHHHHHHHHHhCccEEEE--echhhhc-----cccc-------------------------
Q psy11254 519 VGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV--VSSAIVD-----KYIG------------------------- 566 (741)
Q Consensus 519 ~~~~~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v--~~~~l~~-----~~~g------------------------- 566 (741)
+.+.++.-+.|.|||||||||+++++++...++-..+ .+.++.. +.+|
T Consensus 27 l~v~~Ge~~~liGpsGaGKSTLl~~i~Gl~~p~sG~I~i~g~~i~~~~~~~r~ig~v~Q~~~l~~~ltv~enl~~~~~~~ 106 (239)
T d1v43a3 27 LTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPKDRNISMVFQSYAVWPHMTVYENIAFPLKIK 106 (239)
T ss_dssp EEECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCGGGGTEEEEEC------CCCHHHHHHTTCC--
T ss_pred EEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCEEEEcceecccCCcccceEEEEeechhhcccchHHHHHHHHHHHc
Confidence 4567788899999999999999999999886653333 1111100 0000
Q ss_pred -----h--------------------------HHHHHHHHHHHHHhcCCeEEEEcccccccCCCCCCCCcccHHHHHHHH
Q psy11254 567 -----E--------------------------SARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM 615 (741)
Q Consensus 567 -----~--------------------------s~~~i~~~f~~a~~~~p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~ 615 (741)
+ .+++-|-.+.+|....|.||++||.-+ +-|+..++.+.
T Consensus 107 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSGGq~QRvaiAraL~~~P~iLllDEPts----------~LD~~~~~~i~ 176 (239)
T d1v43a3 107 KFPKDEIDKRVRWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLS----------NLDAKLRVAMR 176 (239)
T ss_dssp CCCHHHHHHHHHHHHHHTTCGGGTTSCTTTCCSSCHHHHHHHHHHTTCCSEEEEESTTT----------TSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHhhhccCCCceeecCCcc----------cCCHHHHHHHH
Confidence 0 011125566667778899999999654 46777777777
Q ss_pred HHHHHccCCCCCCCeEEEEeeCCCC
Q psy11254 616 ELLNQMDGFDSLGQVKMIMATNRPD 640 (741)
Q Consensus 616 ~lL~~~~g~~~~~~v~vi~tTn~~~ 640 (741)
+++..+.. ..++-+|++||.++
T Consensus 177 ~ll~~l~~---~~g~tii~vTHd~~ 198 (239)
T d1v43a3 177 AEIKKLQQ---KLKVTTIYVTHDQV 198 (239)
T ss_dssp HHHHHHHH---HHTCEEEEEESCHH
T ss_pred HHHHHHHH---hcCCeEEEEeCCHH
Confidence 77777621 11344899998765
No 95
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=98.24 E-value=7.8e-07 Score=85.20 Aligned_cols=33 Identities=27% Similarity=0.392 Sum_probs=28.4
Q ss_pred cCCCCCCceEEEcCCCCChHHHHHHHHHHhCcc
Q psy11254 519 VGITPPKGCLLYGPPGTGKTLLARAVASQLDAN 551 (741)
Q Consensus 519 ~~~~~~~~~ll~G~~G~GKt~l~~~~a~~~~~~ 551 (741)
+.++++..+.|.||||||||||++++++.+.+.
T Consensus 22 ~~i~~Gei~~l~G~NGsGKSTLl~~i~gl~~p~ 54 (200)
T d1sgwa_ 22 MTIEKGNVVNFHGPNGIGKTTLLKTISTYLKPL 54 (200)
T ss_dssp EEEETTCCEEEECCTTSSHHHHHHHHTTSSCCS
T ss_pred EEEcCCCEEEEECCCCChHHHHHHHHhcccccC
Confidence 446778889999999999999999999987654
No 96
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=98.24 E-value=1.3e-06 Score=85.73 Aligned_cols=109 Identities=17% Similarity=0.220 Sum_probs=72.6
Q ss_pred cCCCCCCceEEEcCCCCChHHHHHHHHHHhCccEEEE--echhhh-----------------------------------
Q psy11254 519 VGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV--VSSAIV----------------------------------- 561 (741)
Q Consensus 519 ~~~~~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v--~~~~l~----------------------------------- 561 (741)
+.+.++.-+.|.||||+|||||++++++.+.+.-..+ .+.++.
T Consensus 23 ~~v~~Gei~glvG~nGaGKSTLl~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~i~~vpq~~~~~~~ltv~e~l~~~~~~ 102 (238)
T d1vpla_ 23 FEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFGKNVVEEPHEVRKLISYLPEEAGAYRNMQGIEYLRFVAGF 102 (238)
T ss_dssp EEECTTCEEEEECCTTSSHHHHHHHHTTSSCCSEEEEEETTEETTTCHHHHHTTEEEECTTCCCCTTSBHHHHHHHHHHH
T ss_pred eEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCCEEEECcEecccChHHHHhhEeEeeeccccCCCccHHHHHHHHHHh
Confidence 4467788899999999999999999999886653333 111110
Q ss_pred -------------------------ccccc--hHHHHHHHHHHHHHhcCCeEEEEcccccccCCCCCCCCcccHHHHHHH
Q psy11254 562 -------------------------DKYIG--ESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 614 (741)
Q Consensus 562 -------------------------~~~~g--~s~~~i~~~f~~a~~~~p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l 614 (741)
.++++ ..++.-+-.+.+|....|.||++||.-+ +-|+...+.+
T Consensus 103 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lSgG~~qrv~iA~al~~~p~illLDEPt~----------gLD~~~~~~i 172 (238)
T d1vpla_ 103 YASSSSEIEEMVERATEIAGLGEKIKDRVSTYSKGMVRKLLIARALMVNPRLAILDEPTS----------GLDVLNAREV 172 (238)
T ss_dssp HCCCHHHHHHHHHHHHHHHCCGGGGGSBGGGCCHHHHHHHHHHHHHTTCCSEEEEESTTT----------TCCHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHhCCCHHHHhhhhhhCCHHHHHHHHHHHHHhcCCCEEEecCCCC----------CCCHHHHHHH
Confidence 00000 1123335566677778899999999665 4566777788
Q ss_pred HHHHHHccCCCCCCCeEEEEeeCCCCC
Q psy11254 615 MELLNQMDGFDSLGQVKMIMATNRPDT 641 (741)
Q Consensus 615 ~~lL~~~~g~~~~~~v~vi~tTn~~~~ 641 (741)
.+++.++.. .+.-||++||..+.
T Consensus 173 ~~~i~~~~~----~g~tii~~tH~l~~ 195 (238)
T d1vpla_ 173 RKILKQASQ----EGLTILVSSHNMLE 195 (238)
T ss_dssp HHHHHHHHH----TTCEEEEEECCHHH
T ss_pred HHHHHHHHh----cCCEEEEEeCCHHH
Confidence 888877642 13458889987653
No 97
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=98.21 E-value=1.3e-06 Score=86.66 Aligned_cols=119 Identities=19% Similarity=0.285 Sum_probs=78.0
Q ss_pred cCCCCCCceEEEcCCCCChHHHHHHHHHHhCccEEEE--echhh------------------------------------
Q psy11254 519 VGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV--VSSAI------------------------------------ 560 (741)
Q Consensus 519 ~~~~~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v--~~~~l------------------------------------ 560 (741)
+.+.++..+.++||+|||||||++++++.+.+.-..+ ++.++
T Consensus 39 l~i~~Ge~vaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Ti~eNi~~g~~~ 118 (255)
T d2hyda1 39 LSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPT 118 (255)
T ss_dssp EEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEEEEETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSS
T ss_pred EEEcCCCEEEEECCCCCcHHHHHHHHHhcCCccccccccCCEEcccCCHHHhhheeeeeeccccCCCCCHHHHHhccCcC
Confidence 4567888999999999999999999998776542222 11100
Q ss_pred ------------------h-------ccccc------hHHHHHHHHHHHHHhcCCeEEEEcccccccCCCCCCCCcccHH
Q psy11254 561 ------------------V-------DKYIG------ESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADRE 609 (741)
Q Consensus 561 ------------------~-------~~~~g------~s~~~i~~~f~~a~~~~p~Vl~iDE~d~~~~~r~~~~~~~~~~ 609 (741)
+ ...+| ..+++-|-.+.+|-...|.||++||+.+ +-|..
T Consensus 119 ~~~~~~~~al~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~QRi~iARal~~~p~ililDEpts----------~LD~~ 188 (255)
T d2hyda1 119 ATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATS----------ALDLE 188 (255)
T ss_dssp CCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTTSCHHHHHHHHHHHHHHHCCSEEEEESTTT----------TCCHH
T ss_pred CCHHHHHHHHHHhCCHHHHHhccccccchhcCCCCCcCHHHHHHHHHHHHHhcCCCEEEEeCccc----------cCCHH
Confidence 0 00111 1234446667777778999999999776 35666
Q ss_pred HHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCCccccCCCCcceEEEcC
Q psy11254 610 IQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 659 (741)
Q Consensus 610 ~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld~al~rpgR~d~~i~~~ 659 (741)
....+.+.|..+.. +..+|+.||+++.+ + ++|+++.+.
T Consensus 189 t~~~i~~~l~~l~~-----~~TvI~itH~~~~~-----~--~~D~ii~l~ 226 (255)
T d2hyda1 189 SESIIQEALDVLSK-----DRTTLIVAHRLSTI-----T--HADKIVVIE 226 (255)
T ss_dssp HHHHHHHHHHHHTT-----TSEEEEECSSGGGT-----T--TCSEEEEEE
T ss_pred HHHHHHHHHHHHhc-----CCEEEEEeCCHHHH-----H--hCCEEEEEE
Confidence 67777777776642 22467778876543 3 567776654
No 98
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=98.21 E-value=1.1e-06 Score=86.44 Aligned_cols=108 Identities=17% Similarity=0.209 Sum_probs=70.1
Q ss_pred cCCCCCCceEEEcCCCCChHHHHHHHHHHhCccEEEE--echhhhc----------------------------------
Q psy11254 519 VGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV--VSSAIVD---------------------------------- 562 (741)
Q Consensus 519 ~~~~~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v--~~~~l~~---------------------------------- 562 (741)
+.+.++.-+.|.||||+||||+++++++.+.+.-..+ .+.++..
T Consensus 27 ~~i~~Gei~~liGpnGaGKSTl~~~i~Gl~~p~~G~I~~~G~~i~~~~~~~~~r~gi~~~~q~~~l~~~ltv~en~~~~~ 106 (240)
T d1ji0a_ 27 LKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHVINRMGIALVPEGRRIFPELTVYENLMMGA 106 (240)
T ss_dssp EEEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECTTCCHHHHHHTTEEEECSSCCCCTTSBHHHHHHGGG
T ss_pred EEECCCCEEEEECCCCCcHHHHHHHHhCCCCCCccEEEecccccccccHHHHHHhcccccCcccccCCcccHHHHHHHHH
Confidence 4466778899999999999999999999886543222 1111100
Q ss_pred ----------------------------cccc--hHHHHHHHHHHHHHhcCCeEEEEcccccccCCCCCCCCcccHHHHH
Q psy11254 563 ----------------------------KYIG--ESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQR 612 (741)
Q Consensus 563 ----------------------------~~~g--~s~~~i~~~f~~a~~~~p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~ 612 (741)
.+++ ..++.-+-.+.+|....|.+|++||..+ +-|+...+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~LSGG~~Qrv~iAraL~~~P~lLllDEPt~----------gLD~~~~~ 176 (240)
T d1ji0a_ 107 YNRKDKEGIKRDLEWIFSLFPRLKERLKQLGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSL----------GLAPILVS 176 (240)
T ss_dssp TTCCCSSHHHHHHHHHHHHCHHHHTTTTSBSSSSCHHHHHHHHHHHHHTTCCSEEEEECTTT----------TCCHHHHH
T ss_pred HhcCCHHHHHHHHHHHHHHhhChHHHHhCchhhCCHHHHHHHHHHHHHHhCCCEeeecCCCc----------CCCHHHHH
Confidence 0000 1122224555666678899999999654 46777777
Q ss_pred HHHHHHHHccCCCCCCCeEEEEeeCCCC
Q psy11254 613 TLMELLNQMDGFDSLGQVKMIMATNRPD 640 (741)
Q Consensus 613 ~l~~lL~~~~g~~~~~~v~vi~tTn~~~ 640 (741)
.+.+++.++..- ++-||++||+.+
T Consensus 177 ~i~~~i~~l~~~----g~til~~tH~l~ 200 (240)
T d1ji0a_ 177 EVFEVIQKINQE----GTTILLVEQNAL 200 (240)
T ss_dssp HHHHHHHHHHHT----TCCEEEEESCHH
T ss_pred HHHHHHHHHHhC----CCEEEEEeCCHH
Confidence 787888776421 334778888754
No 99
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=98.15 E-value=2.2e-06 Score=83.83 Aligned_cols=109 Identities=20% Similarity=0.283 Sum_probs=72.4
Q ss_pred cCCCCCCceEEEcCCCCChHHHHHHHHHHhCccEEEE--echhhh-----------------------------------
Q psy11254 519 VGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV--VSSAIV----------------------------------- 561 (741)
Q Consensus 519 ~~~~~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v--~~~~l~----------------------------------- 561 (741)
+.+..+.-+.|.|||||||||+++++++...+.-..+ .+.++.
T Consensus 26 l~i~~Ge~~~iiG~sGsGKSTLl~~i~Gl~~p~sG~I~~~g~~i~~~~~~~~~~~rr~ig~VfQ~~~l~~~~tv~eni~~ 105 (240)
T d3dhwc1 26 LHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVAL 105 (240)
T ss_dssp EEECSSCEEEEEESTTSSHHHHHHHHTTSSCCSEEEEEETTEEECTTCHHHHHHHHHHEEECCSSCCCCTTSBHHHHHHH
T ss_pred EEEcCCCEEEEECCCCCCHHHHHHHHcCCccccCCceEEcCeEeeeCChhhhhhhhccccccccccccCCCccHHHHHHH
Confidence 4567778899999999999999999999886553333 111110
Q ss_pred -----------------------------ccccc--hHHHHHHHHHHHHHhcCCeEEEEcccccccCCCCCCCCcccHHH
Q psy11254 562 -----------------------------DKYIG--ESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI 610 (741)
Q Consensus 562 -----------------------------~~~~g--~s~~~i~~~f~~a~~~~p~Vl~iDE~d~~~~~r~~~~~~~~~~~ 610 (741)
.+|++ ..++.-|-.+.+|....|.+|++||.-+ +-|+..
T Consensus 106 ~l~~~~~~~~~~~~~v~~~L~~vgL~~~~~~~~~~LSGG~~QRvaiAraL~~~P~lLllDEPt~----------~LD~~~ 175 (240)
T d3dhwc1 106 PLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATS----------ALDPAT 175 (240)
T ss_dssp HHHTTTCCTTHHHHHHHHHHHHHSTTTTTSSCBSCCCHHHHHHHHHHHHHHTCCSEEEEESGGG----------SSCHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHhhhhccCCCeEEeccccc----------cCCHHH
Confidence 00111 1223335667777778999999999765 456677
Q ss_pred HHHHHHHHHHccCCCCCCCeEEEEeeCCCC
Q psy11254 611 QRTLMELLNQMDGFDSLGQVKMIMATNRPD 640 (741)
Q Consensus 611 ~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~ 640 (741)
.+.+.++|.++.. ..++-+|++||+.+
T Consensus 176 ~~~i~~~l~~l~~---~~g~tvi~vTHdl~ 202 (240)
T d3dhwc1 176 TRSILELLKDINR---RLGLTILLITHEMD 202 (240)
T ss_dssp HHHHHHHHHHHHH---HHCCEEEEEBSCHH
T ss_pred hhHHHHHHHHHHh---ccCCEEEEEcCCHH
Confidence 7777777776631 11345888998765
No 100
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=98.13 E-value=2.6e-06 Score=84.49 Aligned_cols=56 Identities=16% Similarity=0.227 Sum_probs=39.1
Q ss_pred HHHHHHHHhcCCeEEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCC
Q psy11254 573 REMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTL 642 (741)
Q Consensus 573 ~~~f~~a~~~~p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~l 642 (741)
+-.+.+|....|.+|++||..+ +-|+...+.+.+++.++.. .++-||++||+.+.+
T Consensus 158 rv~iAraL~~~P~llilDEPt~----------gLD~~~~~~i~~~i~~l~~----~g~til~vsHdl~~~ 213 (254)
T d1g6ha_ 158 LVEIGRALMTNPKMIVMDEPIA----------GVAPGLAHDIFNHVLELKA----KGITFLIIEHRLDIV 213 (254)
T ss_dssp HHHHHHHHHTCCSEEEEESTTT----------TCCHHHHHHHHHHHHHHHH----TTCEEEEECSCCSTT
T ss_pred HHHHHHHHHhCcCchhhcCCcc----------cCCHHHHHHHHHHHHHHHH----CCCEEEEEeCcHHHH
Confidence 4455666667899999999654 4566677777778777642 245577888877654
No 101
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=98.13 E-value=2.3e-06 Score=83.60 Aligned_cols=33 Identities=27% Similarity=0.398 Sum_probs=28.6
Q ss_pred cCCCCCCceEEEcCCCCChHHHHHHHHHHhCcc
Q psy11254 519 VGITPPKGCLLYGPPGTGKTLLARAVASQLDAN 551 (741)
Q Consensus 519 ~~~~~~~~~ll~G~~G~GKt~l~~~~a~~~~~~ 551 (741)
+.+..+..+.|.|||||||||+++++++...+.
T Consensus 26 l~i~~Ge~~~iiG~sGsGKSTll~~i~gl~~p~ 58 (242)
T d1oxxk2 26 INIENGERFGILGPSGAGKTTFMRIIAGLDVPS 58 (242)
T ss_dssp EEECTTCEEEEECSCHHHHHHHHHHHHTSSCCS
T ss_pred EEECCCCEEEEECCCCCcHHHHHHHHHcCcCCC
Confidence 456778889999999999999999999987554
No 102
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=98.09 E-value=2.2e-06 Score=83.64 Aligned_cols=103 Identities=23% Similarity=0.296 Sum_probs=66.0
Q ss_pred CceEEEcCCCCChHHHHHHHHHHhCccEEEE--echhhh-----------------------------------------
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQLDANFLKV--VSSAIV----------------------------------------- 561 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v--~~~~l~----------------------------------------- 561 (741)
.-+.|.|||||||||++++|++.+.+.-..+ ++.++.
T Consensus 25 e~~~liGpnGaGKSTll~~i~Gl~~p~~G~I~~~G~~i~~~~~~~r~ig~v~Q~~~l~~~ltV~enl~~~l~~~~~~~~~ 104 (240)
T d2onka1 25 DYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPERRGIGFVPQDYALFPHLSVYRNIAYGLRNVERVERD 104 (240)
T ss_dssp SEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCTTTSCCBCCCSSCCCCTTSCHHHHHHTTCTTSCHHHHH
T ss_pred EEEEEECCCCChHHHHHHHHHcCCCCCceEEEECCEECCcCCHHHcCceeeccchhhcccchhhHhhhhhhcccCHHHHH
Confidence 3467899999999999999999886653333 221110
Q ss_pred ----------------ccccc--hHHHHHHHHHHHHHhcCCeEEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccC
Q psy11254 562 ----------------DKYIG--ESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 623 (741)
Q Consensus 562 ----------------~~~~g--~s~~~i~~~f~~a~~~~p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g 623 (741)
+.++. ..+++-|-.+.+|....|.||++||.-+ +-|+..+..+.+++.++..
T Consensus 105 ~~v~~~l~~~gl~~~~~~~~~~LSGG~kQRvaiAral~~~P~illlDEPts----------~LD~~~~~~i~~~i~~l~~ 174 (240)
T d2onka1 105 RRVREMAEKLGIAHLLDRKPARLSGGERQRVALARALVIQPRLLLLDEPLS----------AVDLKTKGVLMEELRFVQR 174 (240)
T ss_dssp HHHHHHHHTTTCTTTTTCCGGGSCHHHHHHHHHHHHHTTCCSSBEEESTTS----------SCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcHhhhhCChhhCCHHHHHHHHHHHHHhccCCceEecCccc----------cCCHHHHHHHHHHHHHHHH
Confidence 00111 1223335667777778999999999655 4566666777777766531
Q ss_pred CCCCCCeEEEEeeCCCC
Q psy11254 624 FDSLGQVKMIMATNRPD 640 (741)
Q Consensus 624 ~~~~~~v~vi~tTn~~~ 640 (741)
..++-+|++||..+
T Consensus 175 ---~~g~tvi~vtHd~~ 188 (240)
T d2onka1 175 ---EFDVPILHVTHDLI 188 (240)
T ss_dssp ---HHTCCEEEEESCHH
T ss_pred ---hcCCeEEEEeCCHH
Confidence 11233888888755
No 103
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=98.09 E-value=1.4e-06 Score=85.91 Aligned_cols=32 Identities=19% Similarity=0.290 Sum_probs=28.0
Q ss_pred cCCCCCCceEEEcCCCCChHHHHHHHHHHhCc
Q psy11254 519 VGITPPKGCLLYGPPGTGKTLLARAVASQLDA 550 (741)
Q Consensus 519 ~~~~~~~~~ll~G~~G~GKt~l~~~~a~~~~~ 550 (741)
+.+.++..+.++||+|||||||++++++.+.+
T Consensus 23 l~i~~Ge~vaivG~sGsGKSTLl~ll~gl~~p 54 (242)
T d1mv5a_ 23 FEAQPNSIIAFAGPSGGGKSTIFSLLERFYQP 54 (242)
T ss_dssp EEECTTEEEEEECCTTSSHHHHHHHHTTSSCC
T ss_pred EEEcCCCEEEEECCCCCCHHHHHHHHHHhhCC
Confidence 45678888999999999999999999987744
No 104
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.06 E-value=3.9e-06 Score=84.45 Aligned_cols=34 Identities=26% Similarity=0.388 Sum_probs=29.3
Q ss_pred hcCCCCCCceEEEcCCCCChHHHHHHHHHHhCcc
Q psy11254 518 RVGITPPKGCLLYGPPGTGKTLLARAVASQLDAN 551 (741)
Q Consensus 518 ~~~~~~~~~~ll~G~~G~GKt~l~~~~a~~~~~~ 551 (741)
++.+.++..+.|+||||||||||+++|++.+.+.
T Consensus 56 sl~i~~Ge~vaivG~nGsGKSTLl~~i~Gl~~p~ 89 (281)
T d1r0wa_ 56 NLNIEKGEMLAITGSTGSGKTSLLMLILGELEAS 89 (281)
T ss_dssp EEEECTTCEEEEEESTTSSHHHHHHHHHTSSCCS
T ss_pred EEEEcCCCEEEEECCCCChHHHHHHHHhCCCcCC
Confidence 3456788889999999999999999999988654
No 105
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=97.99 E-value=6.5e-06 Score=81.59 Aligned_cols=54 Identities=19% Similarity=0.310 Sum_probs=38.2
Q ss_pred HHHHHHHHhcCCeEEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCC
Q psy11254 573 REMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPD 640 (741)
Q Consensus 573 ~~~f~~a~~~~p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~ 640 (741)
|-.+.+|....|.+|++||..+ +-|...+..+..+|.++.. . +.-+|+.|++.+
T Consensus 157 Rv~iAraL~~~P~llilDEPT~----------gLD~~~~~~i~~ll~~l~~---~-g~til~vtHdl~ 210 (258)
T d1b0ua_ 157 RVSIARALAMEPDVLLFDEPTS----------ALDPELVGEVLRIMQQLAE---E-GKTMVVVTHEMG 210 (258)
T ss_dssp HHHHHHHHHTCCSEEEEESTTT----------TSCHHHHHHHHHHHHHHHH---T-TCCEEEECSCHH
T ss_pred HHHHHHHHhcCCCEEEeccccc----------cCCHHHHHHHHHhhhhhcc---c-CCceEEEeCCHH
Confidence 5667777778999999999654 4666777777778777752 1 233777787754
No 106
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=97.94 E-value=4.8e-05 Score=75.32 Aligned_cols=53 Identities=15% Similarity=0.199 Sum_probs=42.1
Q ss_pred CcccccChHHHHHHHHHHhhccCCChHHHhhhCCCCCCCceEEcCCCChHHHHHHHHHHhcCCCceeeec
Q psy11254 169 TYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVS 238 (741)
Q Consensus 169 ~~~~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~GvlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~ 238 (741)
.-+++.|-++..++|.+. ..+.++|+||+|+|||+|++.++..++..+..+..
T Consensus 10 ~~~~f~GR~~el~~l~~~-----------------~~~~i~i~G~~G~GKTsLl~~~~~~~~~~~~~i~~ 62 (283)
T d2fnaa2 10 NRKDFFDREKEIEKLKGL-----------------RAPITLVLGLRRTGKSSIIKIGINELNLPYIYLDL 62 (283)
T ss_dssp SGGGSCCCHHHHHHHHHT-----------------CSSEEEEEESTTSSHHHHHHHHHHHHTCCEEEEEG
T ss_pred ChhhCCChHHHHHHHHhc-----------------cCCEEEEEcCCCCcHHHHHHHHHHHCCCCeEEEEe
Confidence 457889999988887652 12458899999999999999999998877665554
No 107
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=97.91 E-value=0.00011 Score=72.56 Aligned_cols=141 Identities=16% Similarity=0.174 Sum_probs=81.3
Q ss_pred CCCceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhhccccc------------------------------------
Q psy11254 523 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIG------------------------------------ 566 (741)
Q Consensus 523 ~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~~~~~g------------------------------------ 566 (741)
.++.++++||+|+|||++++.++...+..+..+...........
T Consensus 28 ~~~~i~i~G~~G~GKTsLl~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (283)
T d2fnaa2 28 RAPITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEERNYISYKDFLLELQKEINKLVKRLPSLLKALKNIQGIVIM 107 (283)
T ss_dssp CSSEEEEEESTTSSHHHHHHHHHHHHTCCEEEEEGGGGTTCSCCCHHHHHHHHHHHHHHHHHHCTTHHHHTTTSTTEEEC
T ss_pred cCCEEEEEcCCCCcHHHHHHHHHHHCCCCeEEEEeccccccccccHHHHHHHHHHHhhhhhhhhHHHHHHHHhhhccccc
Confidence 34678999999999999999999999887776654332111100
Q ss_pred ----------hHHHHHHHHHHHHH--hcCCeEEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEE
Q psy11254 567 ----------ESARLIREMFNYAR--NHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIM 634 (741)
Q Consensus 567 ----------~s~~~i~~~f~~a~--~~~p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~ 634 (741)
.....+..+++... ...+.++++||++.+..... ......+..+.... ..+..++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~id~~~~~~~~~~-------~~~~~~l~~~~~~~------~~~~~i~ 174 (283)
T d2fnaa2 108 GNEIKFNWNRKDRLSFANLLESFEQASKDNVIIVLDEAQELVKLRG-------VNLLPALAYAYDNL------KRIKFIM 174 (283)
T ss_dssp SSSEEEC-----CCCHHHHHHHHHHTCSSCEEEEEETGGGGGGCTT-------CCCHHHHHHHHHHC------TTEEEEE
T ss_pred ccccccccchhhhhHHHHHHHHHHhhcccccccccchhhhhcccch-------HHHHHHHHHHHHhh------hhhhhhh
Confidence 00011223333322 24578999999998754321 11122333333222 2344444
Q ss_pred eeCCC-------CCCCccccCCCCcceEEEcCCCCHHHHHHHHHHhhcC
Q psy11254 635 ATNRP-------DTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGP 676 (741)
Q Consensus 635 tTn~~-------~~ld~al~rpgR~d~~i~~~~p~~~~r~~i~~~~~~~ 676 (741)
++... ...+..-.-.||+...+++++++.++..++++..+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~l~~~e~~~~l~~~~~~ 223 (283)
T d2fnaa2 175 SGSEMGLLYDYLRVEDPESPLFGRAFSTVELKPFSREEAIEFLRRGFQE 223 (283)
T ss_dssp EESSHHHHHHHTTTTCTTSTTTTCCCEEEEECCCCHHHHHHHHHHHHHH
T ss_pred ccccchHHHHHHHhhhhcchhcccceeEEeeCCCCHHHHHHHHHhhhhh
Confidence 43321 1111111112477788999999999999999887653
No 108
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=97.84 E-value=1.6e-05 Score=77.46 Aligned_cols=30 Identities=27% Similarity=0.311 Sum_probs=26.2
Q ss_pred cCCCCCCceEEEcCCCCChHHHHHHHHHHh
Q psy11254 519 VGITPPKGCLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 519 ~~~~~~~~~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
+.+..+.-+.|.||||+||||+++++++..
T Consensus 20 l~I~~Gei~~iiG~nGaGKSTLl~~l~Gl~ 49 (231)
T d1l7vc_ 20 GEVRAGEILHLVGPNGAGKSTLLARMAGMT 49 (231)
T ss_dssp EEEETTCEEECBCCTTSSHHHHHHHHHTSC
T ss_pred EEEcCCCEEEEECCCCCcHHHHHHHHhCCC
Confidence 446778889999999999999999999854
No 109
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=97.63 E-value=1.2e-05 Score=73.02 Aligned_cols=30 Identities=37% Similarity=0.719 Sum_probs=26.4
Q ss_pred CCceEEcCCCChHHHHHHHHHHhcCCCcee
Q psy11254 206 KGCLLYGPPGTGKTLLARAVASQLDANFLK 235 (741)
Q Consensus 206 ~GvlL~Gp~GtGKTtL~r~ia~~l~~~~~~ 235 (741)
+.++|+|||||||||++|.||..++.++..
T Consensus 3 k~I~l~G~~GsGKSTvak~La~~L~~~~id 32 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQQLNMEFYD 32 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhCCCeEe
Confidence 458899999999999999999999887653
No 110
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=97.59 E-value=1.9e-05 Score=71.66 Aligned_cols=31 Identities=35% Similarity=0.685 Sum_probs=27.9
Q ss_pred CceEEEcCCCCChHHHHHHHHHHhCccEEEE
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQLDANFLKV 555 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v 555 (741)
+.|+|+|||||||||+|+.||..++.+++..
T Consensus 3 k~I~l~G~~GsGKSTvak~La~~L~~~~id~ 33 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQQLNMEFYDS 33 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHTTCEEEEH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhCCCeEee
Confidence 4689999999999999999999999998643
No 111
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=97.58 E-value=7.1e-05 Score=72.89 Aligned_cols=21 Identities=29% Similarity=0.343 Sum_probs=19.0
Q ss_pred CceEEcCCCChHHHHHHHHHH
Q psy11254 207 GCLLYGPPGTGKTLLARAVAS 227 (741)
Q Consensus 207 GvlL~Gp~GtGKTtL~r~ia~ 227 (741)
.++|.|||.+||||++|.++-
T Consensus 43 ~~iiTGpN~~GKSt~lk~i~l 63 (234)
T d1wb9a2 43 MLIITGPNMGGKSTYMRQTAL 63 (234)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEeccCchhhHHHHHHHHH
Confidence 378999999999999999874
No 112
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=97.58 E-value=1.2e-05 Score=74.85 Aligned_cols=38 Identities=18% Similarity=0.271 Sum_probs=32.7
Q ss_pred CCceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhh
Q psy11254 524 PKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIV 561 (741)
Q Consensus 524 ~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~ 561 (741)
.+.|+|.|||||||||+|++||+.++.+++......+.
T Consensus 7 ~K~I~i~G~~GsGKTTla~~La~~~~~~~i~~~~~~~~ 44 (192)
T d1lw7a2 7 AKTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFV 44 (192)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHTTCEEECCTTHHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHhCCCeEeeehHHHh
Confidence 46799999999999999999999999998877655443
No 113
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=97.54 E-value=1.4e-05 Score=74.27 Aligned_cols=32 Identities=19% Similarity=0.285 Sum_probs=27.1
Q ss_pred CCCceEEcCCCChHHHHHHHHHHhcCCCceee
Q psy11254 205 PKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236 (741)
Q Consensus 205 ~~GvlL~Gp~GtGKTtL~r~ia~~l~~~~~~v 236 (741)
.+.|++.||||||||||++.||..++.++...
T Consensus 7 ~K~I~i~G~~GsGKTTla~~La~~~~~~~i~~ 38 (192)
T d1lw7a2 7 AKTVAILGGESSGKSVLVNKLAAVFNTTSAWE 38 (192)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHTTCEEECC
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHhCCCeEee
Confidence 35689999999999999999999998765443
No 114
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=97.49 E-value=6.5e-05 Score=68.72 Aligned_cols=30 Identities=43% Similarity=0.616 Sum_probs=28.1
Q ss_pred ceEEEcCCCCChHHHHHHHHHHhCccEEEE
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQLDANFLKV 555 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v 555 (741)
+++|+|+|||||||+++++|+.++.+|+..
T Consensus 2 ~I~liG~~GsGKsTi~k~La~~l~~~~~d~ 31 (161)
T d1viaa_ 2 NIVFIGFMGSGKSTLARALAKDLDLVFLDS 31 (161)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHHTCEEEEH
T ss_pred cEEEECCCCCCHHHHHHHHHHHhCCCEEec
Confidence 589999999999999999999999999865
No 115
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=97.46 E-value=2.5e-05 Score=71.60 Aligned_cols=31 Identities=45% Similarity=0.630 Sum_probs=27.4
Q ss_pred CCceEEcCCCChHHHHHHHHHHhcCCCceee
Q psy11254 206 KGCLLYGPPGTGKTLLARAVASQLDANFLKV 236 (741)
Q Consensus 206 ~GvlL~Gp~GtGKTtL~r~ia~~l~~~~~~v 236 (741)
++++|+|+|||||||+++.||..++.+|...
T Consensus 1 k~I~liG~~GsGKsTi~k~La~~l~~~~~d~ 31 (161)
T d1viaa_ 1 KNIVFIGFMGSGKSTLARALAKDLDLVFLDS 31 (161)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHHTCEEEEH
T ss_pred CcEEEECCCCCCHHHHHHHHHHHhCCCEEec
Confidence 3578999999999999999999999887654
No 116
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=97.44 E-value=0.00059 Score=68.04 Aligned_cols=46 Identities=15% Similarity=0.127 Sum_probs=34.9
Q ss_pred cccChHHHHHHHHHHhhccCCChHHHhhhCCCCCCC-ceEEcCCCChHHHHHHHHHHh
Q psy11254 172 AIGGLSEQIRELREVIELPLLNPELFQRVGITPPKG-CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 172 ~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~G-vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
+++|-+..+++|.+.+.-. . +.+.+ ++|+|+.|+||||||+.+...
T Consensus 21 ~~~gR~~~~~~i~~~L~~~-~----------~~~~~~v~I~GmgGiGKTtLA~~v~~~ 67 (277)
T d2a5yb3 21 TCYIREYHVDRVIKKLDEM-C----------DLDSFFLFLHGRAGSGKSVIASQALSK 67 (277)
T ss_dssp CSCCCHHHHHHHHHHHHHH-T----------TSSSEEEEEECSTTSSHHHHHHHHHHH
T ss_pred ceeCcHHHHHHHHHHHHhc-c----------CCCceEEEEECCCCCCHHHHHHHHHHh
Confidence 3778999999998877421 0 11223 679999999999999999876
No 117
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=97.42 E-value=2.5e-05 Score=71.70 Aligned_cols=29 Identities=38% Similarity=0.675 Sum_probs=25.4
Q ss_pred CceEEcCCCChHHHHHHHHHHhcCCCcee
Q psy11254 207 GCLLYGPPGTGKTLLARAVASQLDANFLK 235 (741)
Q Consensus 207 GvlL~Gp~GtGKTtL~r~ia~~l~~~~~~ 235 (741)
.++|.|||||||||+++.||..++..+..
T Consensus 6 ~I~i~G~pGsGKTTia~~La~~l~~~~i~ 34 (173)
T d1rkba_ 6 NILLTGTPGVGKTTLGKELASKSGLKYIN 34 (173)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHHCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCcEEe
Confidence 47799999999999999999999876643
No 118
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=97.42 E-value=3.9e-05 Score=70.33 Aligned_cols=29 Identities=38% Similarity=0.675 Sum_probs=26.6
Q ss_pred ceEEEcCCCCChHHHHHHHHHHhCccEEE
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQLDANFLK 554 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~~~~~~~ 554 (741)
.++|+|||||||||+|+.||..++.+++.
T Consensus 6 ~I~i~G~pGsGKTTia~~La~~l~~~~i~ 34 (173)
T d1rkba_ 6 NILLTGTPGVGKTTLGKELASKSGLKYIN 34 (173)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHHCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCcEEe
Confidence 47899999999999999999999988864
No 119
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=97.38 E-value=0.00041 Score=73.00 Aligned_cols=53 Identities=25% Similarity=0.463 Sum_probs=41.7
Q ss_pred CCCCCcccccChHHHHHHHHHHhhccCCChHHHhhhCCCCCCC-ceEEcCCCChHHHHHHHHHHhcCCC
Q psy11254 165 PGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKG-CLLYGPPGTGKTLLARAVASQLDAN 232 (741)
Q Consensus 165 ~~~~~~~~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~G-vlL~Gp~GtGKTtL~r~ia~~l~~~ 232 (741)
.+..++.++|=-..+.+.+++.+.. +.| +++.||.|+||||++.++...+..+
T Consensus 132 ~~~~~l~~LG~~~~~~~~l~~l~~~---------------~~GliLvtGpTGSGKSTTl~~~l~~~~~~ 185 (401)
T d1p9ra_ 132 ATRLDLHSLGMTAHNHDNFRRLIKR---------------PHGIILVTGPTGSGKSTTLYAGLQELNSS 185 (401)
T ss_dssp TTCCCGGGSCCCHHHHHHHHHHHTS---------------SSEEEEEECSTTSCHHHHHHHHHHHHCCT
T ss_pred ccchhhhhhcccHHHHHHHHHHHhh---------------hhceEEEEcCCCCCccHHHHHHhhhhcCC
Confidence 3445688888778888888776643 357 8899999999999999999887544
No 120
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=97.37 E-value=4.2e-05 Score=70.38 Aligned_cols=36 Identities=31% Similarity=0.399 Sum_probs=31.5
Q ss_pred CceEEEcCCCCChHHHHHHHHHHhCccEEEEechhh
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l 560 (741)
+-++|.|||||||||+|+++++.++.+++.+++..+
T Consensus 5 ~iI~l~G~~GsGKSTia~~La~~lg~~~~~~~~d~~ 40 (176)
T d1zp6a1 5 NILLLSGHPGSGKSTIAEALANLPGVPKVHFHSDDL 40 (176)
T ss_dssp EEEEEEECTTSCHHHHHHHHHTCSSSCEEEECTTHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCCEEEecHHHH
Confidence 447899999999999999999999999998876544
No 121
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=97.37 E-value=0.00027 Score=68.12 Aligned_cols=20 Identities=35% Similarity=0.516 Sum_probs=18.4
Q ss_pred ceEEcCCCChHHHHHHHHHH
Q psy11254 208 CLLYGPPGTGKTLLARAVAS 227 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~ 227 (741)
++|.|||.+||||++|.++-
T Consensus 38 ~iiTGpN~~GKSt~lk~i~l 57 (224)
T d1ewqa2 38 VLITGPNMAGKSTFLRQTAL 57 (224)
T ss_dssp EEEESCSSSSHHHHHHHHHH
T ss_pred EEEECCCccccchhhhhhHH
Confidence 78999999999999998874
No 122
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=97.37 E-value=3.5e-05 Score=70.97 Aligned_cols=31 Identities=35% Similarity=0.471 Sum_probs=27.6
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCceeeec
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANFLKVVS 238 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~ 238 (741)
++|.|||||||||+++.|+..++.++..+.+
T Consensus 7 I~l~G~~GsGKSTia~~La~~lg~~~~~~~~ 37 (176)
T d1zp6a1 7 LLLSGHPGSGKSTIAEALANLPGVPKVHFHS 37 (176)
T ss_dssp EEEEECTTSCHHHHHHHHHTCSSSCEEEECT
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCCEEEecH
Confidence 7799999999999999999999888776654
No 123
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=97.36 E-value=4.3e-05 Score=70.57 Aligned_cols=31 Identities=26% Similarity=0.470 Sum_probs=27.3
Q ss_pred CCceEEcCCCChHHHHHHHHHHhcCCCceee
Q psy11254 206 KGCLLYGPPGTGKTLLARAVASQLDANFLKV 236 (741)
Q Consensus 206 ~GvlL~Gp~GtGKTtL~r~ia~~l~~~~~~v 236 (741)
+.++|+|+|||||||+++.+|..++.+|...
T Consensus 3 ~~Iil~G~~GsGKSTia~~LA~~Lg~~~id~ 33 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGRELARALGYEFVDT 33 (170)
T ss_dssp CCEEEESCTTSSHHHHHHHHHHHHTCEEEEH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHhCCCEEeh
Confidence 4578999999999999999999999887653
No 124
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=97.35 E-value=3.7e-05 Score=72.28 Aligned_cols=30 Identities=43% Similarity=0.729 Sum_probs=25.4
Q ss_pred CCC--ceEEcCCCChHHHHHHHHHHhcCCCce
Q psy11254 205 PKG--CLLYGPPGTGKTLLARAVASQLDANFL 234 (741)
Q Consensus 205 ~~G--vlL~Gp~GtGKTtL~r~ia~~l~~~~~ 234 (741)
|+| ++|+|||||||||+++.||..++..+.
T Consensus 1 p~~~riil~G~pGSGKsT~a~~La~~~g~~~i 32 (190)
T d1ak2a1 1 PKGVRAVLLGPPGAGKGTQAPKLAKNFCVCHL 32 (190)
T ss_dssp CCCCEEEEECCTTSSHHHHHHHHHHHHTCEEE
T ss_pred CCccEEEEECCCCCCHHHHHHHHHHHhCCeEE
Confidence 456 778999999999999999999875543
No 125
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.31 E-value=3.7e-05 Score=71.14 Aligned_cols=29 Identities=34% Similarity=0.589 Sum_probs=24.9
Q ss_pred CCceEEcCCCChHHHHHHHHHHhcCCCce
Q psy11254 206 KGCLLYGPPGTGKTLLARAVASQLDANFL 234 (741)
Q Consensus 206 ~GvlL~Gp~GtGKTtL~r~ia~~l~~~~~ 234 (741)
+.++|+||||||||||++.++..+.....
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l~~~~~ 30 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVLKSSGV 30 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHHHHTTC
T ss_pred cEEEEECCCCCcHHHHHHHHHHHHHHCCC
Confidence 56899999999999999999998855433
No 126
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.31 E-value=5.2e-05 Score=69.58 Aligned_cols=30 Identities=33% Similarity=0.630 Sum_probs=26.5
Q ss_pred CceEEcCCCChHHHHHHHHHHhcCCCceee
Q psy11254 207 GCLLYGPPGTGKTLLARAVASQLDANFLKV 236 (741)
Q Consensus 207 GvlL~Gp~GtGKTtL~r~ia~~l~~~~~~v 236 (741)
.++|+|+|||||||++|.+|..++.+|...
T Consensus 3 ~IvliG~~G~GKSTig~~La~~l~~~fiD~ 32 (165)
T d2iyva1 3 KAVLVGLPGSGKSTIGRRLAKALGVGLLDT 32 (165)
T ss_dssp SEEEECSTTSSHHHHHHHHHHHHTCCEEEH
T ss_pred cEEEECCCCCCHHHHHHHHHHHhCCCeEee
Confidence 367889999999999999999999888654
No 127
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=97.29 E-value=5.3e-05 Score=69.59 Aligned_cols=26 Identities=58% Similarity=0.983 Sum_probs=23.5
Q ss_pred CCC--ceEEcCCCChHHHHHHHHHHhcC
Q psy11254 205 PKG--CLLYGPPGTGKTLLARAVASQLD 230 (741)
Q Consensus 205 ~~G--vlL~Gp~GtGKTtL~r~ia~~l~ 230 (741)
|++ ++|.|||||||||+++.||..++
T Consensus 3 pk~~~I~i~G~~GsGKTT~~~~La~~l~ 30 (174)
T d1y63a_ 3 PKGINILITGTPGTGKTSMAEMIAAELD 30 (174)
T ss_dssp CSSCEEEEECSTTSSHHHHHHHHHHHST
T ss_pred CCCCEEEEEeCCCCCHHHHHHHHHHHhC
Confidence 556 88999999999999999999875
No 128
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=97.27 E-value=5.8e-05 Score=69.53 Aligned_cols=29 Identities=31% Similarity=0.429 Sum_probs=24.6
Q ss_pred CCC--ceEEcCCCChHHHHHHHHHHhcCCCc
Q psy11254 205 PKG--CLLYGPPGTGKTLLARAVASQLDANF 233 (741)
Q Consensus 205 ~~G--vlL~Gp~GtGKTtL~r~ia~~l~~~~ 233 (741)
.+| |+|+|+|||||||++++||..++..+
T Consensus 4 ~~g~~I~l~G~~GsGKTTia~~La~~L~~~~ 34 (183)
T d1m8pa3 4 TQGFTIFLTGYMNSGKDAIARALQVTLNQQG 34 (183)
T ss_dssp TCCEEEEEECSTTSSHHHHHHHHHHHHHHHC
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHhhcC
Confidence 457 67999999999999999999886543
No 129
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=97.25 E-value=0.00058 Score=66.85 Aligned_cols=24 Identities=33% Similarity=0.542 Sum_probs=21.0
Q ss_pred CceEEcCCCChHHHHHHHHHHhcC
Q psy11254 207 GCLLYGPPGTGKTLLARAVASQLD 230 (741)
Q Consensus 207 GvlL~Gp~GtGKTtL~r~ia~~l~ 230 (741)
.++|.|++|||||++|++|.....
T Consensus 25 pvlI~Ge~GtGK~~~A~~ih~~s~ 48 (247)
T d1ny5a2 25 PVLITGESGVGKEVVARLIHKLSD 48 (247)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHST
T ss_pred CEEEECCCCcCHHHHHHHHHHhcC
Confidence 489999999999999999986543
No 130
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=97.25 E-value=8.9e-05 Score=68.31 Aligned_cols=31 Identities=26% Similarity=0.470 Sum_probs=28.1
Q ss_pred CceEEEcCCCCChHHHHHHHHHHhCccEEEE
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQLDANFLKV 555 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v 555 (741)
..++|.|+|||||||+++.+|+.++.+|+..
T Consensus 3 ~~Iil~G~~GsGKSTia~~LA~~Lg~~~id~ 33 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGRELARALGYEFVDT 33 (170)
T ss_dssp CCEEEESCTTSSHHHHHHHHHHHHTCEEEEH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHhCCCEEeh
Confidence 4588999999999999999999999998754
No 131
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.25 E-value=8.5e-05 Score=68.11 Aligned_cols=30 Identities=33% Similarity=0.630 Sum_probs=27.5
Q ss_pred ceEEEcCCCCChHHHHHHHHHHhCccEEEE
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQLDANFLKV 555 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v 555 (741)
+++|+|+|||||||+++.+|+.++.+|+..
T Consensus 3 ~IvliG~~G~GKSTig~~La~~l~~~fiD~ 32 (165)
T d2iyva1 3 KAVLVGLPGSGKSTIGRRLAKALGVGLLDT 32 (165)
T ss_dssp SEEEECSTTSSHHHHHHHHHHHHTCCEEEH
T ss_pred cEEEECCCCCCHHHHHHHHHHHhCCCeEee
Confidence 478889999999999999999999999864
No 132
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=97.24 E-value=7.8e-05 Score=68.43 Aligned_cols=31 Identities=26% Similarity=0.334 Sum_probs=26.8
Q ss_pred CceEEcCCCChHHHHHHHHHHhcCCCceeee
Q psy11254 207 GCLLYGPPGTGKTLLARAVASQLDANFLKVV 237 (741)
Q Consensus 207 GvlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~ 237 (741)
-|+|.|||||||||+++.|+..++..+..+.
T Consensus 5 iI~l~G~~GsGKsTva~~L~~~l~~~~~~~~ 35 (178)
T d1qhxa_ 5 MIILNGGSSAGKSGIVRCLQSVLPEPWLAFG 35 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHSSSCEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHcCCCeEEee
Confidence 4779999999999999999999987765554
No 133
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=97.23 E-value=0.00012 Score=67.14 Aligned_cols=34 Identities=24% Similarity=0.326 Sum_probs=29.6
Q ss_pred CceEEEcCCCCChHHHHHHHHHHhCccEEEEech
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 558 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~ 558 (741)
+-|+|+||||+||||+|++|++.++.+++.++..
T Consensus 4 kiI~l~G~~GsGKsTva~~L~~~l~~~~~~~~~d 37 (178)
T d1qhxa_ 4 RMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVD 37 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHSSSCEEEEEHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHcCCCeEEeecc
Confidence 4478899999999999999999999988877643
No 134
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=97.23 E-value=5.8e-05 Score=69.20 Aligned_cols=27 Identities=48% Similarity=0.720 Sum_probs=24.0
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCce
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANFL 234 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~~ 234 (741)
++|.|||||||||+++.|+..++..+.
T Consensus 9 ivl~G~~GsGKsT~a~~La~~l~~~~~ 35 (171)
T d1knqa_ 9 YVLMGVSGSGKSAVASEVAHQLHAAFL 35 (171)
T ss_dssp EEEECSTTSCHHHHHHHHHHHHTCEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCCee
Confidence 679999999999999999999976554
No 135
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=97.23 E-value=0.00017 Score=73.40 Aligned_cols=70 Identities=16% Similarity=0.207 Sum_probs=53.9
Q ss_pred hhhhhcchHHHHHHHHHHHH----HhcCCeEEEeccccccccccCCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEe
Q psy11254 276 IVDKYIGESARLIREMFNYA----RNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMA 351 (741)
Q Consensus 276 ~~~~~~G~~~~~v~~~~~~A----~~~~P~ILllDEid~l~~~~~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~a 351 (741)
.+..+|||+.+.+..++..+ ...+|+|++||| |.+++|+..++.+.++|..+.. ..+ .+|+|
T Consensus 275 ~~~~lS~Ge~~~~~la~~l~~~~~~~~~~~illiDE----------pe~~Lh~~~~~~l~~~l~~~~~---~~~-Qviit 340 (369)
T g1ii8.1 275 PLTFLSGGERIALGLAFRLAMSLYLAGEISLLILDE----------PTPYLDEERRRKLITIMERYLK---KIP-QVILV 340 (369)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHHHHHHSSCSEEEEEC----------CSSSSCSHHHHHHHHHHHHTGG---GSS-EEEEE
T ss_pred eeeccchHHHHHHHHHHHHHHHHhcCCCCCEEEEEC----------CCCCCCHHHHHHHHHHHHHHHh---cCC-EEEEE
Confidence 45678888887774433333 236788999999 9999999999999999988754 122 78999
Q ss_pred eCCCCCCC
Q psy11254 352 TNRPDTLD 359 (741)
Q Consensus 352 t~~~~~ld 359 (741)
||+++.++
T Consensus 341 THs~~~~~ 348 (369)
T g1ii8.1 341 SHDEELKD 348 (369)
T ss_dssp ESCGGGGG
T ss_pred echHHHHH
Confidence 99998776
No 136
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=97.22 E-value=0.00038 Score=67.52 Aligned_cols=22 Identities=41% Similarity=0.537 Sum_probs=20.2
Q ss_pred ceEEcCCCChHHHHHHHHHHhc
Q psy11254 208 CLLYGPPGTGKTLLARAVASQL 229 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l 229 (741)
++++||||||||+++.-+|...
T Consensus 29 ~li~G~pGsGKT~l~~qia~~~ 50 (242)
T d1tf7a2 29 ILATGATGTGKTLLVSRFVENA 50 (242)
T ss_dssp EEEEECTTSSHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHH
Confidence 8899999999999999888775
No 137
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=97.22 E-value=0.00011 Score=69.01 Aligned_cols=38 Identities=24% Similarity=0.412 Sum_probs=30.8
Q ss_pred CCCceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhhc
Q psy11254 523 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562 (741)
Q Consensus 523 ~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~~ 562 (741)
++.+++|.|||||||||+|+.||+.++..+ ++.++++.
T Consensus 2 ~~~riil~G~pGSGKsT~a~~La~~~g~~~--i~~gdllr 39 (190)
T d1ak2a1 2 KGVRAVLLGPPGAGKGTQAPKLAKNFCVCH--LATGDMLR 39 (190)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHHHTCEE--EEHHHHHH
T ss_pred CccEEEEECCCCCCHHHHHHHHHHHhCCeE--EeHHHHHH
Confidence 456789999999999999999999997654 55566653
No 138
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=97.17 E-value=7.6e-05 Score=68.21 Aligned_cols=26 Identities=35% Similarity=0.622 Sum_probs=22.8
Q ss_pred CceEEcCCCChHHHHHHHHHHhcCCC
Q psy11254 207 GCLLYGPPGTGKTLLARAVASQLDAN 232 (741)
Q Consensus 207 GvlL~Gp~GtGKTtL~r~ia~~l~~~ 232 (741)
-++|.|||||||||+++.|+..++..
T Consensus 4 lI~i~G~~GsGKTTva~~L~~~~~~~ 29 (176)
T d2bdta1 4 LYIITGPAGVGKSTTCKRLAAQLDNS 29 (176)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHSSSE
T ss_pred EEEEECCCCCCHHHHHHHHHHHcCCC
Confidence 36799999999999999999988653
No 139
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.14 E-value=0.00051 Score=63.29 Aligned_cols=23 Identities=22% Similarity=0.359 Sum_probs=20.4
Q ss_pred ceEEcCCCChHHHHHHHHHHhcC
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLD 230 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~ 230 (741)
++|+|+|||||||+++.++...+
T Consensus 17 iil~G~pGsGKST~a~~l~~~~~ 39 (172)
T d1yj5a2 17 VVAVGFPGAGKSTFIQEHLVSAG 39 (172)
T ss_dssp EEEECCTTSSHHHHHHHHTGGGT
T ss_pred EEEECCCCCCHHHHHHHHHHhcC
Confidence 88999999999999999877654
No 140
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=97.14 E-value=0.00074 Score=63.69 Aligned_cols=26 Identities=23% Similarity=0.379 Sum_probs=22.6
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCc
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANF 233 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~ 233 (741)
++|+|.||+||||+++.||..++...
T Consensus 5 i~l~GlpgsGKSTla~~L~~~l~~~~ 30 (213)
T d1bifa1 5 IVMVGLPARGKTYISKKLTRYLNFIG 30 (213)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcC
Confidence 67999999999999999998876443
No 141
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.13 E-value=0.00011 Score=69.15 Aligned_cols=27 Identities=22% Similarity=0.391 Sum_probs=23.8
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCce
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANFL 234 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~~ 234 (741)
++|+|||||||||+++.||..++..+.
T Consensus 11 I~i~GppGSGKsT~a~~La~~~g~~~i 37 (196)
T d1ukza_ 11 IFVLGGPGAGKGTQCEKLVKDYSFVHL 37 (196)
T ss_dssp EEEECSTTSSHHHHHHHHHHHSSCEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCeEE
Confidence 779999999999999999999876543
No 142
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=97.12 E-value=0.0007 Score=65.57 Aligned_cols=104 Identities=14% Similarity=0.164 Sum_probs=57.6
Q ss_pred CceEEEcCCCCChHHHHHHHHHHh-----Cc----c----------EEEEechhhh----ccccchHHHHHHHHHHHHHh
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQL-----DA----N----------FLKVVSSAIV----DKYIGESARLIREMFNYARN 581 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~-----~~----~----------~~~v~~~~l~----~~~~g~s~~~i~~~f~~a~~ 581 (741)
+.++++|||.+|||+++|.+|-.. +. . +..+...+-+ +.|. ..-..++.+++.+..
T Consensus 42 ~~~iiTGpN~~GKSt~lk~i~l~~~laq~G~~VpA~~a~~~~~d~I~~~~~~~d~~~~~~S~F~-~E~~~~~~il~~~~~ 120 (234)
T d1wb9a2 42 RMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFM-VEMTETANILHNATE 120 (234)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHHTTTCCBSSSEEEECCCCEEEEEEC-----------CH-HHHHHHHHHHHHCCT
T ss_pred eEEEEeccCchhhHHHHHHHHHHHHHHHcCCeEecCceecccchhheeEEccCcccccchhHHH-HHHHHHHHHHHhccc
Confidence 457899999999999999887533 11 1 2222222211 2222 223456778876654
Q ss_pred cCCeEEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCC
Q psy11254 582 HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLD 643 (741)
Q Consensus 582 ~~p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld 643 (741)
.+.+++||+.+- ++.. +.......++.++.. ..++.+|+||+..+...
T Consensus 121 --~sLvliDE~~~g-------T~~~--eg~~l~~a~l~~l~~---~~~~~~i~tTH~~~l~~ 168 (234)
T d1wb9a2 121 --YSLVLMDEIGRG-------TSTY--DGLSLAWACAENLAN---KIKALTLFATHYFELTQ 168 (234)
T ss_dssp --TEEEEEESCCCC-------SSSS--HHHHHHHHHHHHHHH---TTCCEEEEECSCGGGGG
T ss_pred --ccEEeecccccC-------CChh--hhhHHHHHhhhhhhc---cccceEEEecchHHHhh
Confidence 479999998761 1111 223344444444421 13456888998765443
No 143
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=97.12 E-value=0.0017 Score=62.78 Aligned_cols=89 Identities=18% Similarity=0.199 Sum_probs=55.8
Q ss_pred cCCChHHHHhc--CCCCCCceEEEcCCCCChHHHHHHHHHHh---CccEEEEech----hhhc-----------------
Q psy11254 509 PLLNPELFQRV--GITPPKGCLLYGPPGTGKTLLARAVASQL---DANFLKVVSS----AIVD----------------- 562 (741)
Q Consensus 509 ~~~~~~~~~~~--~~~~~~~~ll~G~~G~GKt~l~~~~a~~~---~~~~~~v~~~----~l~~----------------- 562 (741)
+...+.+-.-+ |++++.-++++||||||||+++..+|... +.....++.. .+..
T Consensus 9 ~TG~~~LD~~l~GGi~~gsl~li~G~pGsGKT~l~~qia~~~~~~~~~~~~is~e~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (242)
T d1tf7a2 9 SSGVVRLDEMCGGGFFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNL 88 (242)
T ss_dssp CCSCHHHHHHTTSSEESSCEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEESSSCHHHHHHHHHTTSCCHHHHHHTTS
T ss_pred CCCcHHHHHhhcCCCcCCeEEEEEeCCCCCHHHHHHHHHHHHHHhccccceeeccCCHHHHHHHHHHcCCChHHHhhcCc
Confidence 33444444444 37788889999999999999998888765 3333333221 0000
Q ss_pred -----cc--cchHHHHHHHHHHHHHhcCCeEEEEcccccccC
Q psy11254 563 -----KY--IGESARLIREMFNYARNHQPCIIFMDEIDAIGG 597 (741)
Q Consensus 563 -----~~--~g~s~~~i~~~f~~a~~~~p~Vl~iDE~d~~~~ 597 (741)
.+ .......+..+........|.++++|-++.+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~vviDs~~~~~~ 130 (242)
T d1tf7a2 89 LKIVCAYPESAGLEDHLQIIKSEINDFKPARIAIDSLSALAR 130 (242)
T ss_dssp EEECCCCGGGSCHHHHHHHHHHHHHTTCCSEEEEECHHHHTS
T ss_pred eEEEEeecchhhHHHHHHHHHHHHHhcCCceeeeecchhhhc
Confidence 00 011233455666666777899999999998763
No 144
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.12 E-value=9.5e-05 Score=68.60 Aligned_cols=28 Identities=25% Similarity=0.438 Sum_probs=24.7
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCcee
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANFLK 235 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~~~ 235 (741)
++|+|||||||||+++.||..++..+..
T Consensus 3 I~i~G~pGSGKsT~a~~La~~~~~~~i~ 30 (182)
T d1zina1 3 LVLMGLPGAGKGTQAEKIVAAYGIPHIS 30 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHCCCEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCceec
Confidence 6799999999999999999999776544
No 145
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=97.11 E-value=0.00015 Score=66.39 Aligned_cols=29 Identities=41% Similarity=0.607 Sum_probs=25.2
Q ss_pred CCCceEEEcCCCCChHHHHHHHHHHhCcc
Q psy11254 523 PPKGCLLYGPPGTGKTLLARAVASQLDAN 551 (741)
Q Consensus 523 ~~~~~ll~G~~G~GKt~l~~~~a~~~~~~ 551 (741)
.+-+|+|+|||||||||+++.|+..++..
T Consensus 4 k~~~I~i~G~~GsGKTT~~~~La~~l~~~ 32 (174)
T d1y63a_ 4 KGINILITGTPGTGKTSMAEMIAAELDGF 32 (174)
T ss_dssp SSCEEEEECSTTSSHHHHHHHHHHHSTTE
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHhCCC
Confidence 34569999999999999999999998743
No 146
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=97.11 E-value=0.00054 Score=67.98 Aligned_cols=62 Identities=18% Similarity=0.254 Sum_probs=42.9
Q ss_pred HHHHHhcCCeEEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCCccccCCCCcceE
Q psy11254 576 FNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 655 (741)
Q Consensus 576 f~~a~~~~p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld~al~rpgR~d~~ 655 (741)
+..+....|.+++|||++. +-|+..++.+.++|..+..- + .=||+|||+++.++. +|++
T Consensus 218 ~~~~l~~~~~llllDEp~~----------~Ld~~~~~~l~~~l~~~~~~---~-~qviv~TH~~~~~~~-------~D~i 276 (292)
T g1f2t.1 218 MSLYLAGEISLLILDEPTP----------YLDEERRRKLITIMERYLKK---I-PQVILVSHDEELKDA-------ADHV 276 (292)
T ss_dssp HHHHHHSSCSEEEEESCSC----------TTCHHHHHHHHHHHHHTGGG---S-SEEEEEESCGGGGGG-------CSEE
T ss_pred HhhhhcCCCCEEEEeCCcc----------cCCHHHHHHHHHHHHHHHhC---C-CEEEEEeecHHHHHh-------CCEE
Confidence 4445557789999999886 45677778888888876421 1 138888998776542 4677
Q ss_pred EEc
Q psy11254 656 IEI 658 (741)
Q Consensus 656 i~~ 658 (741)
|.+
T Consensus 277 i~l 279 (292)
T g1f2t.1 277 IRI 279 (292)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 147
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=97.10 E-value=0.00036 Score=71.08 Aligned_cols=28 Identities=21% Similarity=0.401 Sum_probs=24.8
Q ss_pred CCceEEcCCCChHHHHHHHHHHhcCCCc
Q psy11254 206 KGCLLYGPPGTGKTLLARAVASQLDANF 233 (741)
Q Consensus 206 ~GvlL~Gp~GtGKTtL~r~ia~~l~~~~ 233 (741)
+++++.||.||||||+++++++.+.+..
T Consensus 167 ~nili~G~tgSGKTT~l~al~~~i~~~~ 194 (323)
T d1g6oa_ 167 KNVIVCGGTGSGKTTYIKSIMEFIPKEE 194 (323)
T ss_dssp CCEEEEESTTSSHHHHHHHHGGGSCTTC
T ss_pred CCEEEEeeccccchHHHHHHhhhccccc
Confidence 4689999999999999999999887654
No 148
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.08 E-value=6.1e-05 Score=70.62 Aligned_cols=30 Identities=30% Similarity=0.416 Sum_probs=24.9
Q ss_pred CC--ceEEcCCCChHHHHHHHHHHhcCCCcee
Q psy11254 206 KG--CLLYGPPGTGKTLLARAVASQLDANFLK 235 (741)
Q Consensus 206 ~G--vlL~Gp~GtGKTtL~r~ia~~l~~~~~~ 235 (741)
+| ++|+|+|||||||+++.||..++..+..
T Consensus 18 ~g~vI~L~G~pGSGKTTiAk~La~~l~~~~~~ 49 (195)
T d1x6va3 18 RGCTVWLTGLSGAGKTTVSMALEEYLVCHGIP 49 (195)
T ss_dssp CCEEEEEESSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHhcCCC
Confidence 56 5689999999999999999988665443
No 149
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=97.08 E-value=0.00015 Score=66.16 Aligned_cols=28 Identities=32% Similarity=0.551 Sum_probs=24.7
Q ss_pred ceEEEcCCCCChHHHHHHHHHHhCccEE
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQLDANFL 553 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~~~~~~ 553 (741)
-++|.|||||||||+|+.|+..++..++
T Consensus 4 lI~i~G~~GsGKTTva~~L~~~~~~~~~ 31 (176)
T d2bdta1 4 LYIITGPAGVGKSTTCKRLAAQLDNSAY 31 (176)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHSSSEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHcCCCEE
Confidence 3789999999999999999999987644
No 150
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.06 E-value=0.00016 Score=66.93 Aligned_cols=36 Identities=19% Similarity=0.367 Sum_probs=29.5
Q ss_pred ceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhhcc
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 563 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~~~ 563 (741)
+|+|.|||||||||+|+.||+.++..++ +.++++..
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~~~~~i--~~~~ll~~ 37 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAEKIVAAYGIPHI--STGDMFRA 37 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEE--EHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCcee--chhHHHHH
Confidence 4789999999999999999999987754 55555543
No 151
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=97.06 E-value=9.7e-05 Score=69.27 Aligned_cols=29 Identities=14% Similarity=0.350 Sum_probs=25.0
Q ss_pred CCceEEcCCCChHHHHHHHHHHhcCCCce
Q psy11254 206 KGCLLYGPPGTGKTLLARAVASQLDANFL 234 (741)
Q Consensus 206 ~GvlL~Gp~GtGKTtL~r~ia~~l~~~~~ 234 (741)
..++|.|||||||||+++.||..++..+.
T Consensus 4 m~I~i~GppGsGKsT~a~~La~~~~~~~i 32 (189)
T d1zaka1 4 LKVMISGAPASGKGTQCELIKTKYQLAHI 32 (189)
T ss_dssp CCEEEEESTTSSHHHHHHHHHHHHCCEEC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHCCcEE
Confidence 35889999999999999999999876543
No 152
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=97.06 E-value=0.00016 Score=66.08 Aligned_cols=31 Identities=42% Similarity=0.555 Sum_probs=26.6
Q ss_pred CceEEEcCCCCChHHHHHHHHHHhCccEEEE
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQLDANFLKV 555 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v 555 (741)
.-++|+|||||||||+|+.|++.++.+++..
T Consensus 7 ~iivl~G~~GsGKsT~a~~La~~l~~~~~~~ 37 (171)
T d1knqa_ 7 HIYVLMGVSGSGKSAVASEVAHQLHAAFLDG 37 (171)
T ss_dssp EEEEEECSTTSCHHHHHHHHHHHHTCEEEEG
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCCeech
Confidence 3477899999999999999999998776544
No 153
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=97.02 E-value=0.0004 Score=68.70 Aligned_cols=134 Identities=20% Similarity=0.131 Sum_probs=63.5
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCceeeeccccc-chhhHHHHHhhhhhhhcccccccccccCCCccchhhhhcchHHH
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV-TSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESAR 286 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~ 286 (741)
+.++||+|||||+++-.++......-+.+...... .......... |+..+.--.......+..-
T Consensus 60 tei~G~~~sGKT~l~l~~~~~aqk~g~~v~yiDtE~~~~~~~a~~~---------------Gvd~d~i~~~~~~~~E~~~ 124 (268)
T d1xp8a1 60 TEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDPVYARAL---------------GVNTDELLVSQPDNGEQAL 124 (268)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHT---------------TCCGGGCEEECCSSHHHHH
T ss_pred EEEecCCccchHHHHHHHHHHHHhCCCEEEEEECCccCCHHHHHHh---------------CCCchhEEEEcCCCHHHHH
Confidence 66999999999999998887664332222211000 0111111111 2211100011112222221
Q ss_pred HHHHHHHHHHhcCCeEEEeccccccccccCCCCCCcc---HHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCC
Q psy11254 287 LIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSAD---REIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTL 358 (741)
Q Consensus 287 ~v~~~~~~A~~~~P~ILllDEid~l~~~~~~p~~~lD---~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~l 358 (741)
.+ +-.......++++++|=+.++.+...-.....+ ....+.+..++..+.......++.+|++.|-...+
T Consensus 125 ~~--~~~l~~~~~~~liIiDSi~al~~r~e~~~~~~~~~~~~~a~~l~~~lr~l~~~~~~~~~~vi~tNQv~~~~ 197 (268)
T d1xp8a1 125 EI--MELLVRSGAIDVVVVDSVAALTPRAEIEGDMGDSLPGLQARLMSQALRKLTAILSKTGTAAIFINQVREKI 197 (268)
T ss_dssp HH--HHHHHTTTCCSEEEEECTTTCCCSTTC--------CCHHHHHHHHHHHHHHHHHTTTCCEEEEEEEC----
T ss_pred HH--HHHHHhcCCCcEEEEecccccccHHHHcccccchhHHHHHHHHHHHHHHHHhhhhhcCCeEEEEeEEeecc
Confidence 11 212223456899999999998853321111111 12344555555555544445778888887755544
No 154
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=97.02 E-value=0.00015 Score=68.01 Aligned_cols=38 Identities=13% Similarity=0.370 Sum_probs=30.7
Q ss_pred CCceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhhcc
Q psy11254 524 PKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 563 (741)
Q Consensus 524 ~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~~~ 563 (741)
|-+++|.|||||||||+|+.|++.++.+++ +.++++..
T Consensus 3 Pm~I~i~GppGsGKsT~a~~La~~~~~~~i--s~~~~~~~ 40 (189)
T d1zaka1 3 PLKVMISGAPASGKGTQCELIKTKYQLAHI--SAGDLLRA 40 (189)
T ss_dssp SCCEEEEESTTSSHHHHHHHHHHHHCCEEC--CHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHCCcEE--ehhHHHHH
Confidence 456899999999999999999999987764 55555443
No 155
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=97.01 E-value=0.0012 Score=65.13 Aligned_cols=124 Identities=20% Similarity=0.236 Sum_probs=67.7
Q ss_pred CCCCCCceEEEcCCCCChHHHHHHHHHHh---CccEEEEechhhhcc----------------ccchHHHHHHHHHHHHH
Q psy11254 520 GITPPKGCLLYGPPGTGKTLLARAVASQL---DANFLKVVSSAIVDK----------------YIGESARLIREMFNYAR 580 (741)
Q Consensus 520 ~~~~~~~~ll~G~~G~GKt~l~~~~a~~~---~~~~~~v~~~~l~~~----------------~~g~s~~~i~~~f~~a~ 580 (741)
|++.++-..++||+|||||+++-.++... +...+.++...-++. .....++.+..+-...+
T Consensus 53 Gip~g~itei~G~~~sGKT~l~l~~~~~aqk~g~~v~yiDtE~~~~~~~a~~~Gvd~d~i~~~~~~~~E~~~~~~~~l~~ 132 (268)
T d1xp8a1 53 GIPRGRITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDPVYARALGVNTDELLVSQPDNGEQALEIMELLVR 132 (268)
T ss_dssp SEETTSEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHHT
T ss_pred CccCceEEEEecCCccchHHHHHHHHHHHHhCCCEEEEEECCccCCHHHHHHhCCCchhEEEEcCCCHHHHHHHHHHHHh
Confidence 34556668899999999999987776554 344555543321111 11123333333333334
Q ss_pred hcCCeEEEEcccccccCCCCCCCCccc---HHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCC
Q psy11254 581 NHQPCIIFMDEIDAIGGRRFSEGTSAD---REIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLD 643 (741)
Q Consensus 581 ~~~p~Vl~iDE~d~~~~~r~~~~~~~~---~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld 643 (741)
...++++++|=+.++.++..-.+...+ ....+.+..++..+..+-...++.+|+|.+-...++
T Consensus 133 ~~~~~liIiDSi~al~~r~e~~~~~~~~~~~~~a~~l~~~lr~l~~~~~~~~~~vi~tNQv~~~~g 198 (268)
T d1xp8a1 133 SGAIDVVVVDSVAALTPRAEIEGDMGDSLPGLQARLMSQALRKLTAILSKTGTAAIFINQVREKIG 198 (268)
T ss_dssp TTCCSEEEEECTTTCCCSTTC--------CCHHHHHHHHHHHHHHHHHTTTCCEEEEEEEC-----
T ss_pred cCCCcEEEEecccccccHHHHcccccchhHHHHHHHHHHHHHHHHhhhhhcCCeEEEEeEEeeccc
Confidence 456889999999998865432221111 123455566665555444455777787766554443
No 156
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.99 E-value=0.00015 Score=67.42 Aligned_cols=28 Identities=39% Similarity=0.612 Sum_probs=24.4
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCcee
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANFLK 235 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~~~ 235 (741)
++|.|||||||||+++.||..++.....
T Consensus 3 I~i~G~pGsGKsT~a~~La~~~g~~~i~ 30 (181)
T d2cdna1 3 VLLLGPPGAGKGTQAVKLAEKLGIPQIS 30 (181)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHTCCEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCceEc
Confidence 6799999999999999999999766543
No 157
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=96.98 E-value=0.00015 Score=67.43 Aligned_cols=28 Identities=25% Similarity=0.458 Sum_probs=24.5
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCcee
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANFLK 235 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~~~ 235 (741)
++|+|||||||||+++.||..++..+..
T Consensus 3 I~i~G~pGSGKsT~a~~La~~~g~~~is 30 (182)
T d1s3ga1 3 IVLMGLPGAGKGTQADRIVEKYGTPHIS 30 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHCCCEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCceee
Confidence 6799999999999999999999776544
No 158
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=96.98 E-value=0.00066 Score=66.93 Aligned_cols=78 Identities=18% Similarity=0.221 Sum_probs=47.7
Q ss_pred CCCCCCceEEEcCCCCChHHHHHHHHHHh---CccEEEEechh----------------hhccccchHHHHHHHHHHHHH
Q psy11254 520 GITPPKGCLLYGPPGTGKTLLARAVASQL---DANFLKVVSSA----------------IVDKYIGESARLIREMFNYAR 580 (741)
Q Consensus 520 ~~~~~~~~ll~G~~G~GKt~l~~~~a~~~---~~~~~~v~~~~----------------l~~~~~g~s~~~i~~~f~~a~ 580 (741)
|++.+.-..|+||||||||+++-.++... +...+.++... ++-......+..+..+-...+
T Consensus 50 Gi~~g~itei~G~~gsGKTtl~l~~~~~~q~~g~~~vyidtE~~~~~~~a~~~Gvd~d~v~~~~~~~~E~~~~~i~~l~~ 129 (263)
T d1u94a1 50 GLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALAR 129 (263)
T ss_dssp SEETTSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHHH
T ss_pred CccCceEEEEecCCCcHHHHHHHHHHHHHHcCCCEEEEEccccccCHHHHHHhCCCHHHEEEecCCCHHHHHHHHHHHHh
Confidence 45666678999999999999987666554 33445554331 111111223333333333345
Q ss_pred hcCCeEEEEcccccccC
Q psy11254 581 NHQPCIIFMDEIDAIGG 597 (741)
Q Consensus 581 ~~~p~Vl~iDE~d~~~~ 597 (741)
...++++++|=+.++.+
T Consensus 130 ~~~~~liViDSi~al~~ 146 (263)
T d1u94a1 130 SGAVDVIVVDSVAALTP 146 (263)
T ss_dssp HTCCSEEEEECGGGCCC
T ss_pred cCCCCEEEEECcccccc
Confidence 56788999999988864
No 159
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=96.96 E-value=0.00015 Score=68.09 Aligned_cols=27 Identities=22% Similarity=0.583 Sum_probs=23.9
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCce
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANFL 234 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~~ 234 (741)
++|+|||||||||+++.||..++..+.
T Consensus 9 IiliG~PGSGKtT~a~~La~~~g~~~i 35 (189)
T d2ak3a1 9 AAIMGAPGSGKGTVSSRITKHFELKHL 35 (189)
T ss_dssp EEEECCTTSSHHHHHHHHHHHBCCEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCeEE
Confidence 779999999999999999999876543
No 160
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=96.94 E-value=0.00027 Score=66.30 Aligned_cols=37 Identities=16% Similarity=0.372 Sum_probs=29.7
Q ss_pred CCCceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhh
Q psy11254 523 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIV 561 (741)
Q Consensus 523 ~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~ 561 (741)
.|.-|++.|||||||||+|+.||+.++... ++..+++
T Consensus 5 kp~iI~i~G~pGSGKsT~a~~La~~~g~~~--i~~g~~~ 41 (194)
T d1qf9a_ 5 KPNVVFVLGGPGSGKGTQCANIVRDFGWVH--LSAGDLL 41 (194)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHHHHCCEE--EEHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHCCce--EchhhHH
Confidence 455689999999999999999999998654 4555554
No 161
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=96.93 E-value=0.0011 Score=63.49 Aligned_cols=60 Identities=13% Similarity=0.207 Sum_probs=35.4
Q ss_pred HHHHHHhcCCeEEEeccccccccccCCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCCCCCC
Q psy11254 291 MFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLD 359 (741)
Q Consensus 291 ~~~~A~~~~P~ILllDEid~l~~~~~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~~~ld 359 (741)
+-..+....|.++++|-++.+.... ..+....+.+..++..+.. .++++++++|.....+
T Consensus 117 l~~~i~~~~~~~viiD~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 176 (242)
T d1tf7a1 117 INYAIQKYRARRVSIDSVTSVFQQY-----DASSVVRRELFRLVARLKQ----IGATTVMTTERIEEYG 176 (242)
T ss_dssp HHHHHHHHTCSEEEEECSTTTSTTT-----CCHHHHHHHHHHHHHHHHH----HTCEEEEEEECSSSSS
T ss_pred HHHHHHhhccchhhhhHHHHHHHhc-----cChhHHHHHHHHHHHHHHh----cCCceEEeeccccccc
Confidence 3344456789999999988876421 2233334444444444443 4567888877655443
No 162
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.93 E-value=0.00023 Score=66.10 Aligned_cols=35 Identities=31% Similarity=0.513 Sum_probs=28.7
Q ss_pred ceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhhc
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~~ 562 (741)
+++|.|||||||||+|+.||+.++...+ +.++++.
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~g~~~i--~~~~l~~ 36 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKLGIPQI--STGELFR 36 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCCEE--EHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceE--chHHHHH
Confidence 4789999999999999999999987655 4455544
No 163
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.92 E-value=0.0002 Score=65.90 Aligned_cols=24 Identities=42% Similarity=0.724 Sum_probs=22.5
Q ss_pred CceEEEcCCCCChHHHHHHHHHHh
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
++++|+|||||||||+++.++..+
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l 25 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVL 25 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHH
T ss_pred cEEEEECCCCCcHHHHHHHHHHHH
Confidence 579999999999999999999887
No 164
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=96.91 E-value=0.00027 Score=65.68 Aligned_cols=34 Identities=21% Similarity=0.412 Sum_probs=28.3
Q ss_pred ceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhh
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIV 561 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~ 561 (741)
+|+|.|||||||||+|+.||+.++.+++ +.++++
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~g~~~i--s~gdll 35 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADRIVEKYGTPHI--STGDMF 35 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEE--EHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCcee--eHHHHH
Confidence 4789999999999999999999987765 444544
No 165
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=96.91 E-value=0.00025 Score=66.49 Aligned_cols=35 Identities=17% Similarity=0.473 Sum_probs=29.2
Q ss_pred ceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhhc
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~~ 562 (741)
+++|.|||||||||+++.||..++..+ ++.++++.
T Consensus 8 rIiliG~PGSGKtT~a~~La~~~g~~~--is~gdllr 42 (189)
T d2ak3a1 8 RAAIMGAPGSGKGTVSSRITKHFELKH--LSSGDLLR 42 (189)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHBCCEE--EEHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHHCCeE--EcHHHHHH
Confidence 689999999999999999999998665 56666554
No 166
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=96.87 E-value=0.00018 Score=67.60 Aligned_cols=27 Identities=19% Similarity=0.331 Sum_probs=23.6
Q ss_pred CceEEcCCCChHHHHHHHHHHhcCCCc
Q psy11254 207 GCLLYGPPGTGKTLLARAVASQLDANF 233 (741)
Q Consensus 207 GvlL~Gp~GtGKTtL~r~ia~~l~~~~ 233 (741)
-++|+|||||||||+++.||..++...
T Consensus 8 iI~i~G~pGSGKsT~a~~La~~~g~~~ 34 (194)
T d1qf9a_ 8 VVFVLGGPGSGKGTQCANIVRDFGWVH 34 (194)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHCCEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCce
Confidence 378999999999999999999887543
No 167
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.87 E-value=0.00019 Score=66.72 Aligned_cols=27 Identities=37% Similarity=0.641 Sum_probs=23.6
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCce
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANFL 234 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~~ 234 (741)
++|+|||||||||+++.||..++..+.
T Consensus 5 Ivl~G~pGSGKtT~a~~La~~~g~~~i 31 (180)
T d1akya1 5 MVLIGPPGAGKGTQAPNLQERFHAAHL 31 (180)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHCCEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCceE
Confidence 678999999999999999999876543
No 168
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=96.87 E-value=0.00031 Score=69.38 Aligned_cols=24 Identities=33% Similarity=0.545 Sum_probs=20.5
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCC
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDA 231 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~ 231 (741)
+.|+|||||||||++-.++.....
T Consensus 57 tei~G~~gsGKTtl~l~~~~~~q~ 80 (263)
T d1u94a1 57 VEIYGPESSGKTTLTLQVIAAAQR 80 (263)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHH
T ss_pred EEEecCCCcHHHHHHHHHHHHHHc
Confidence 679999999999999988876643
No 169
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.86 E-value=0.0003 Score=65.22 Aligned_cols=36 Identities=25% Similarity=0.485 Sum_probs=28.9
Q ss_pred CceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhhc
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~~ 562 (741)
-+++|.|||||||||+++.||+.++... ++..+++.
T Consensus 3 mrIvl~G~pGSGKtT~a~~La~~~g~~~--i~~~d~~~ 38 (180)
T d1akya1 3 IRMVLIGPPGAGKGTQAPNLQERFHAAH--LATGDMLR 38 (180)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHCCEE--EEHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCce--Eeccccce
Confidence 3588999999999999999999998664 45555543
No 170
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.86 E-value=0.00016 Score=66.43 Aligned_cols=27 Identities=30% Similarity=0.341 Sum_probs=23.4
Q ss_pred CCceEEEcCCCCChHHHHHHHHHHhCc
Q psy11254 524 PKGCLLYGPPGTGKTLLARAVASQLDA 550 (741)
Q Consensus 524 ~~~~ll~G~~G~GKt~l~~~~a~~~~~ 550 (741)
+.-|+|+|+|||||||+|++||..++.
T Consensus 6 g~~I~l~G~~GsGKTTia~~La~~L~~ 32 (183)
T d1m8pa3 6 GFTIFLTGYMNSGKDAIARALQVTLNQ 32 (183)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHhh
Confidence 344788999999999999999999854
No 171
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=96.86 E-value=0.00025 Score=65.70 Aligned_cols=28 Identities=21% Similarity=0.331 Sum_probs=24.2
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCcee
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANFLK 235 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~~~ 235 (741)
++|+|||||||||+++.||..++..+..
T Consensus 3 I~i~G~pGSGKsT~~~~La~~~~~~~i~ 30 (179)
T d1e4va1 3 IILLGAPVAGKGTQAQFIMEKYGIPQIS 30 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHCCCEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCceec
Confidence 5789999999999999999998765543
No 172
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=96.82 E-value=0.00033 Score=64.80 Aligned_cols=34 Identities=18% Similarity=0.310 Sum_probs=27.8
Q ss_pred ceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhh
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIV 561 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~ 561 (741)
+++|.|||||||||.++.||+.++..++ +.++++
T Consensus 2 ~I~i~G~pGSGKsT~~~~La~~~~~~~i--~~~~ll 35 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQFIMEKYGIPQI--STGDML 35 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHCCCEE--EHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCcee--chhhHh
Confidence 4789999999999999999999987654 444443
No 173
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=96.82 E-value=0.00098 Score=63.16 Aligned_cols=110 Identities=19% Similarity=0.189 Sum_probs=54.8
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCceeeecccccchhhHHHHHhhhhhhhcccccccccccCCCccchhhhhcchHHHH
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARL 287 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~ 287 (741)
++|+||+|+||||.+-=||..+...-.++........ ..+. .++ ...+.+..+++.. ......+....
T Consensus 12 i~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~--R~gA--~eQ----L~~~a~~l~v~~~----~~~~~~d~~~~ 79 (211)
T d2qy9a2 12 ILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTF--RAAA--VEQ----LQVWGQRNNIPVI----AQHTGADSASV 79 (211)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHTTTCCEEEECCCTT--CHHH--HHH----HHHHHHHTTCCEE----CCSTTCCHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccc--cccc--hhh----hhhhhhhcCCccc----ccccCCCHHHH
Confidence 7799999999998877677665432222221000000 0000 000 0011111111111 01111223444
Q ss_pred HHHHHHHHHhcCCeEEEeccccccccccCCCC-CCccHHHHHHHHHHHHhccC
Q psy11254 288 IREMFNYARNHQPCIIFMDEIDAIGGRRFSEG-TSADREIQRTLMELLNQMDG 339 (741)
Q Consensus 288 v~~~~~~A~~~~P~ILllDEid~l~~~~~~p~-~~lD~~~~~~l~~lL~~l~~ 339 (741)
+++....|...+-+++|+|= ++ ++.|....+.+..+.+.+..
T Consensus 80 l~~~~~~a~~~~~d~ilIDT----------aGr~~~d~~~~~el~~l~~~~~~ 122 (211)
T d2qy9a2 80 IFDAIQAAKARNIDVLIADT----------AGRLQNKSHLMEELKKIVRVMKK 122 (211)
T ss_dssp HHHHHHHHHHTTCSEEEECC----------CCCGGGHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCEEEecc----------CCCccccHHHHHHHHHHHHHHhh
Confidence 55566667777788999997 43 34566666666666665543
No 174
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=96.82 E-value=0.00023 Score=63.66 Aligned_cols=22 Identities=36% Similarity=0.537 Sum_probs=19.1
Q ss_pred ceEEcCCCChHHHHHHHHHHhc
Q psy11254 208 CLLYGPPGTGKTLLARAVASQL 229 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l 229 (741)
++|+|||||||||+++.|+...
T Consensus 5 Iii~G~pGsGKTTla~~L~~~~ 26 (152)
T d1ly1a_ 5 ILTIGCPGSGKSTWAREFIAKN 26 (152)
T ss_dssp EEEECCTTSSHHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHhC
Confidence 6799999999999999887653
No 175
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.80 E-value=0.00034 Score=65.71 Aligned_cols=34 Identities=15% Similarity=0.304 Sum_probs=28.1
Q ss_pred ceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhh
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIV 561 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~ 561 (741)
.++|.|||||||||+|+.||+.++..+ ++.++++
T Consensus 10 iI~i~GppGSGKsT~a~~La~~~g~~~--is~gdl~ 43 (196)
T d1ukza_ 10 VIFVLGGPGAGKGTQCEKLVKDYSFVH--LSAGDLL 43 (196)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHSSCEE--EEHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCeE--EehhHHH
Confidence 488899999999999999999998665 4555554
No 176
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=96.78 E-value=0.00027 Score=66.36 Aligned_cols=26 Identities=19% Similarity=0.409 Sum_probs=23.3
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCc
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANF 233 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~ 233 (741)
++|+|||||||||+++.||..++...
T Consensus 11 I~l~G~pGSGKsT~a~~La~~~g~~~ 36 (194)
T d3adka_ 11 IFVVGGPGSGKGTQCEKIVQKYGYTH 36 (194)
T ss_dssp EEEEECTTSSHHHHHHHHHHHTCCEE
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCee
Confidence 77999999999999999999887544
No 177
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=96.76 E-value=0.00022 Score=64.83 Aligned_cols=29 Identities=28% Similarity=0.248 Sum_probs=23.7
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCceee
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANFLKV 236 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v 236 (741)
++++|+||||||||++.|+..+.....++
T Consensus 5 i~itG~~GSGKTTL~~~L~~~l~~~g~~v 33 (170)
T d1np6a_ 5 LAFAAWSGTGKTTLLKKLIPALCARGIRP 33 (170)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHHTTCCE
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHHCCCeE
Confidence 67999999999999999998875543333
No 178
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.74 E-value=0.00099 Score=61.25 Aligned_cols=37 Identities=19% Similarity=0.276 Sum_probs=28.0
Q ss_pred CCCCceEEEcCCCCChHHHHHHHHHHhCccEEEEechhh
Q psy11254 522 TPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560 (741)
Q Consensus 522 ~~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l 560 (741)
+.+.-++++|+|||||||+|+.++...+.. .++..++
T Consensus 12 ~~p~liil~G~pGsGKST~a~~l~~~~~~~--~i~~D~~ 48 (172)
T d1yj5a2 12 PNPEVVVAVGFPGAGKSTFIQEHLVSAGYV--HVNRDTL 48 (172)
T ss_dssp SSCCEEEEECCTTSSHHHHHHHHTGGGTCE--EEEHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHhcCCE--EEchHHH
Confidence 345668999999999999999998877644 3444443
No 179
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.74 E-value=0.0003 Score=65.90 Aligned_cols=26 Identities=19% Similarity=0.410 Sum_probs=23.1
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCc
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANF 233 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~ 233 (741)
++|.|||||||||+|+.||..++...
T Consensus 4 I~i~GppGSGKsT~a~~La~~~g~~~ 29 (194)
T d1teva_ 4 VFVLGGPGAGKGTQCARIVEKYGYTH 29 (194)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHCCEE
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCce
Confidence 67999999999999999999886544
No 180
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=96.73 E-value=0.0031 Score=60.40 Aligned_cols=102 Identities=15% Similarity=0.152 Sum_probs=54.7
Q ss_pred ceEEEcCCCCChHHHHHHHHHHh-----C----cc----------EEEEechhhhcc---ccchHHHHHHHHHHHHHhcC
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQL-----D----AN----------FLKVVSSAIVDK---YIGESARLIREMFNYARNHQ 583 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~-----~----~~----------~~~v~~~~l~~~---~~g~s~~~i~~~f~~a~~~~ 583 (741)
-++++|||.+||||++|.++-.. + .. +..+...+-+.. .+..--+.++.+++.+. .
T Consensus 37 ~~iiTGpN~~GKSt~lk~i~l~~ilAq~G~~vpA~~~~i~~~d~I~~~~~~~d~~~~~~StF~~el~~~~~il~~~~--~ 114 (224)
T d1ewqa2 37 LVLITGPNMAGKSTFLRQTALIALLAQVGSFVPAEEAHLPLFDGIYTRIGASDDLAGGKSTFMVEMEEVALILKEAT--E 114 (224)
T ss_dssp EEEEESCSSSSHHHHHHHHHHHHHHHTTTCCBSSSEEEECCCSEEEEECCC------CCSHHHHHHHHHHHHHHHCC--T
T ss_pred EEEEECCCccccchhhhhhHHHHHHHhccceeecCceEEeecceEEEEECCCccccCCccHHHHhHHHHHHHhccCC--C
Confidence 47899999999999999777433 2 11 122222222111 11111245677777654 3
Q ss_pred CeEEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCC
Q psy11254 584 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTL 642 (741)
Q Consensus 584 p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~l 642 (741)
.+.+++||+-+- + ...+.......+++.+-.. +..+++|||..+..
T Consensus 115 ~sLvliDE~~~g--------T-~~~eg~ala~aile~L~~~----~~~~i~tTH~~eL~ 160 (224)
T d1ewqa2 115 NSLVLLDEVGRG--------T-SSLDGVAIATAVAEALHER----RAYTLFATHYFELT 160 (224)
T ss_dssp TEEEEEESTTTT--------S-CHHHHHHHHHHHHHHHHHH----TCEEEEECCCHHHH
T ss_pred CcEEeecccccC--------c-chhhhcchHHHHHHHHhhc----CcceEEeeechhhh
Confidence 479999998761 1 1123333334444444321 34588899876543
No 181
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=96.72 E-value=0.00045 Score=61.67 Aligned_cols=33 Identities=27% Similarity=0.436 Sum_probs=25.0
Q ss_pred eEEEcCCCCChHHHHHHHHHHhCccEEEEechhh
Q psy11254 527 CLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560 (741)
Q Consensus 527 ~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l 560 (741)
++++|||||||||+|+.++.... ....++..++
T Consensus 5 Iii~G~pGsGKTTla~~L~~~~~-~~~~~~~d~~ 37 (152)
T d1ly1a_ 5 ILTIGCPGSGKSTWAREFIAKNP-GFYNINRDDY 37 (152)
T ss_dssp EEEECCTTSSHHHHHHHHHHHST-TEEEECHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHhCC-CCEEechHHH
Confidence 68899999999999998876543 3555555544
No 182
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=96.71 E-value=0.00046 Score=64.75 Aligned_cols=38 Identities=16% Similarity=0.328 Sum_probs=30.7
Q ss_pred CCceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhhcc
Q psy11254 524 PKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 563 (741)
Q Consensus 524 ~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~~~ 563 (741)
+.-++|.|||||||||+|+.||+.++.+. ++.++++..
T Consensus 8 ~~iI~l~G~pGSGKsT~a~~La~~~g~~~--is~g~llr~ 45 (194)
T d3adka_ 8 SKIIFVVGGPGSGKGTQCEKIVQKYGYTH--LSTGDLLRA 45 (194)
T ss_dssp SCEEEEEECTTSSHHHHHHHHHHHTCCEE--EEHHHHHHH
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHhCCee--EeccHHHHH
Confidence 45588999999999999999999997654 566666554
No 183
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=96.70 E-value=0.0053 Score=60.75 Aligned_cols=124 Identities=19% Similarity=0.251 Sum_probs=67.2
Q ss_pred CceEEEcCCCCChHHHHHHHHHHhC----cc-----EEEEechh----h-------hc--------cc---cchHHHHH-
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQLD----AN-----FLKVVSSA----I-------VD--------KY---IGESARLI- 572 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~~----~~-----~~~v~~~~----l-------~~--------~~---~g~s~~~i- 572 (741)
.-+.++|..|.||||+|+.+.+... .. ++.++... + .. .. ........
T Consensus 45 ~~v~I~GmgGiGKTtLA~~v~~~~~~~~~~~f~~~~Wv~vs~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (277)
T d2a5yb3 45 FFLFLHGRAGSGKSVIASQALSKSDQLIGINYDSIVWLKDSGTAPKSTFDLFTDILLMLKSEDDLLNFPSVEHVTSVVLK 124 (277)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHCSSTBTTTBSEEEEEECCCCSTTHHHHHHHHHHHHHTTTSCCTTCCCCTTCCHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHhhhhhhhhcCceEEEEEecCCCCHHHHHHHHHHHHHHhcchhhcCCccchhhhhHHHH
Confidence 3478999999999999999987632 11 23332210 0 00 00 00111111
Q ss_pred HHHHHHHHhcCCeEEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCCccccCCCCc
Q psy11254 573 REMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRL 652 (741)
Q Consensus 573 ~~~f~~a~~~~p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld~al~rpgR~ 652 (741)
..+........+++++||++... . .+.. +.. . +..||+||...+..... .. +
T Consensus 125 ~~~~~~~L~~kr~LlVLDDv~~~-------------~---~~~~-~~~---~----~srilvTTR~~~v~~~~-~~--~- 176 (277)
T d2a5yb3 125 RMICNALIDRPNTLFVFDDVVQE-------------E---TIRW-AQE---L----RLRCLVTTRDVEISNAA-SQ--T- 176 (277)
T ss_dssp HHHHHHHTTSTTEEEEEEEECCH-------------H---HHHH-HHH---T----TCEEEEEESBGGGGGGC-CS--C-
T ss_pred HHHHHHHhccCCeeEecchhhHH-------------h---hhhh-hcc---c----CceEEEEeehHHHHHhc-CC--C-
Confidence 22233333456799999997641 1 1111 111 1 23477777655332221 11 1
Q ss_pred ceEEEcCCCCHHHHHHHHHHhhcC
Q psy11254 653 DRKIEIPLPNEQARLEILKIHAGP 676 (741)
Q Consensus 653 d~~i~~~~p~~~~r~~i~~~~~~~ 676 (741)
...+.++.++.++..++|..+...
T Consensus 177 ~~~~~l~~L~~~ea~~Lf~~~~~~ 200 (277)
T d2a5yb3 177 CEFIEVTSLEIDECYDFLEAYGMP 200 (277)
T ss_dssp EEEEECCCCCHHHHHHHHHHTSCC
T ss_pred CceEECCCCCHHHHHHHHHHHhCC
Confidence 146789999999999999876543
No 184
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=96.70 E-value=0.0066 Score=57.27 Aligned_cols=112 Identities=18% Similarity=0.243 Sum_probs=59.7
Q ss_pred CCCceEEEcCCCCChHHHHHHHHHHh---CccEEEEechhh-------hc-------------cccchHHHHHHHHHHHH
Q psy11254 523 PPKGCLLYGPPGTGKTLLARAVASQL---DANFLKVVSSAI-------VD-------------KYIGESARLIREMFNYA 579 (741)
Q Consensus 523 ~~~~~ll~G~~G~GKt~l~~~~a~~~---~~~~~~v~~~~l-------~~-------------~~~g~s~~~i~~~f~~a 579 (741)
.|.-++|+||+|+||||.+.-+|..+ +.....+....+ +. ....+....++...+.+
T Consensus 8 ~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~d~~~~l~~~~~~a 87 (211)
T d2qy9a2 8 APFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAA 87 (211)
T ss_dssp TTEEEEEECCTTSCHHHHHHHHHHHHHTTTCCEEEECCCTTCHHHHHHHHHHHHHTTCCEECCSTTCCHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccccccchhhhhhhhhhcCCcccccccCCCHHHHHHHHHHHH
Confidence 34558899999999998766667555 333333322110 00 01112344556666667
Q ss_pred HhcCCeEEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCC--CCCe-EEEEeeCCCCCCC
Q psy11254 580 RNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDS--LGQV-KMIMATNRPDTLD 643 (741)
Q Consensus 580 ~~~~p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~--~~~v-~vi~tTn~~~~ld 643 (741)
+.....++|+|=+-. ...+....+.+..+.+.+...+. ...+ +|+-++...+.+.
T Consensus 88 ~~~~~d~ilIDTaGr---------~~~d~~~~~el~~l~~~~~~~~~~~p~~~~LVl~a~~~~~~~~ 145 (211)
T d2qy9a2 88 KARNIDVLIADTAGR---------LQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVS 145 (211)
T ss_dssp HHTTCSEEEECCCCC---------GGGHHHHHHHHHHHHHHHTTTCTTCCSEEEEEEEGGGTHHHHH
T ss_pred HHcCCCEEEeccCCC---------ccccHHHHHHHHHHHHHHhhhcccCcceeeeehhcccCcchHH
Confidence 666667999995433 22344445556666666554332 1233 3444444444333
No 185
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.69 E-value=0.00048 Score=64.47 Aligned_cols=35 Identities=14% Similarity=0.343 Sum_probs=28.6
Q ss_pred ceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhhc
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~~ 562 (741)
.|+|.|||||||||.|+.||+.++.. .++.++++.
T Consensus 3 iI~i~GppGSGKsT~a~~La~~~g~~--~i~~g~llR 37 (194)
T d1teva_ 3 VVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGELLR 37 (194)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHCCE--EEEHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCc--eEcHHHHHH
Confidence 47899999999999999999999755 455666543
No 186
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=96.68 E-value=0.00035 Score=66.71 Aligned_cols=27 Identities=37% Similarity=0.604 Sum_probs=23.6
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCce
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANFL 234 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~~ 234 (741)
+++.|||||||||+++.||..++..+.
T Consensus 6 I~I~GppGSGKgT~ak~La~~~gl~~i 32 (225)
T d1ckea_ 6 ITIDGPSGAGKGTLCKAMAEALQWHLL 32 (225)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHTCEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCcEE
Confidence 667899999999999999999976553
No 187
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=96.64 E-value=0.00053 Score=65.38 Aligned_cols=34 Identities=35% Similarity=0.505 Sum_probs=28.7
Q ss_pred eEEEcCCCCChHHHHHHHHHHhCccEEEEechhhhc
Q psy11254 527 CLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562 (741)
Q Consensus 527 ~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~~ 562 (741)
|++.|||||||+|.|+.||+.++.++ ++.++++.
T Consensus 6 I~I~GppGSGKgT~ak~La~~~gl~~--iStGdLlR 39 (225)
T d1ckea_ 6 ITIDGPSGAGKGTLCKAMAEALQWHL--LDSGAIYR 39 (225)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHTCEE--EEHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCcE--ECHHHHHH
Confidence 67789999999999999999998665 57677654
No 188
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=96.63 E-value=0.013 Score=55.25 Aligned_cols=22 Identities=32% Similarity=0.436 Sum_probs=17.9
Q ss_pred ceEEcCCCChHHHHHHHHHHhc
Q psy11254 208 CLLYGPPGTGKTLLARAVASQL 229 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l 229 (741)
++|+||+|+||||.+-=||..+
T Consensus 14 i~lvGptGvGKTTTiAKLAa~~ 35 (213)
T d1vmaa2 14 IMVVGVNGTGKTTSCGKLAKMF 35 (213)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 7799999999998766666554
No 189
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=96.62 E-value=0.0017 Score=64.06 Aligned_cols=22 Identities=41% Similarity=0.640 Sum_probs=19.3
Q ss_pred ceEEcCCCChHHHHHHHHHHhc
Q psy11254 208 CLLYGPPGTGKTLLARAVASQL 229 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l 229 (741)
.+|+|+||+|||||+-.+|..+
T Consensus 32 ~~i~G~~G~GKS~l~l~la~~i 53 (274)
T d1nlfa_ 32 GALVSPGGAGKSMLALQLAAQI 53 (274)
T ss_dssp EEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHH
Confidence 6799999999999999888654
No 190
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=96.62 E-value=0.0033 Score=59.89 Aligned_cols=115 Identities=20% Similarity=0.304 Sum_probs=63.5
Q ss_pred CCCCCCceEEEcCCCCChHHHHHHHHHH-h---CccEEEEechh------------------hhc---------------
Q psy11254 520 GITPPKGCLLYGPPGTGKTLLARAVASQ-L---DANFLKVVSSA------------------IVD--------------- 562 (741)
Q Consensus 520 ~~~~~~~~ll~G~~G~GKt~l~~~~a~~-~---~~~~~~v~~~~------------------l~~--------------- 562 (741)
|++++.-++|+|+||+|||+++-.++.. . +.....++..+ ...
T Consensus 22 Gi~~G~~~~I~G~~G~GKT~la~~~~~~~~~~~~~~~~~~s~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (242)
T d1tf7a1 22 GLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASPDPEG 101 (242)
T ss_dssp SEETTSEEEEEESTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHHHHHGGGTCCHHHHHHTTSEEEEECCCCSSC
T ss_pred CCcCCeEEEEEeCCCCCHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHcCCChHHHHHhcchhhhhhccchhh
Confidence 5788888999999999999998655432 1 22333332210 000
Q ss_pred -ccc--chHHHHHHHHHHHHHhcCCeEEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCC
Q psy11254 563 -KYI--GESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRP 639 (741)
Q Consensus 563 -~~~--g~s~~~i~~~f~~a~~~~p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~ 639 (741)
... ......+..+........|.++++|-++.+.... .......+.+..++...... ++.++++++..
T Consensus 102 ~~~~~~~~~~~l~~~l~~~i~~~~~~~viiD~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 172 (242)
T d1tf7a1 102 QEVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQY-----DASSVVRRELFRLVARLKQI----GATTVMTTERI 172 (242)
T ss_dssp CSCCSSHHHHHHHHHHHHHHHHHTCSEEEEECSTTTSTTT-----CCHHHHHHHHHHHHHHHHHH----TCEEEEEEECS
T ss_pred hhhhccccHHHHHHHHHHHHHhhccchhhhhHHHHHHHhc-----cChhHHHHHHHHHHHHHHhc----CCceEEeeccc
Confidence 000 0112334455555566778999999998876432 12233344444444444322 34566666555
Q ss_pred CCCC
Q psy11254 640 DTLD 643 (741)
Q Consensus 640 ~~ld 643 (741)
...+
T Consensus 173 ~~~~ 176 (242)
T d1tf7a1 173 EEYG 176 (242)
T ss_dssp SSSS
T ss_pred cccc
Confidence 5444
No 191
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=96.58 E-value=0.00045 Score=66.12 Aligned_cols=27 Identities=26% Similarity=0.570 Sum_probs=23.1
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCce
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANFL 234 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~~ 234 (741)
+.+-|||||||||+|+.||..++..+.
T Consensus 6 IaIdGp~GsGKgT~ak~La~~lg~~~i 32 (223)
T d1q3ta_ 6 IAIDGPASSGKSTVAKIIAKDFGFTYL 32 (223)
T ss_dssp EEEECSSCSSHHHHHHHHHHHHCCEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCcEE
Confidence 446699999999999999999976553
No 192
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=96.58 E-value=0.011 Score=55.65 Aligned_cols=23 Identities=26% Similarity=0.355 Sum_probs=18.8
Q ss_pred ceEEcCCCChHHHHHHHHHHhcC
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLD 230 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~ 230 (741)
++|+||+|+||||.+-=||..+.
T Consensus 9 i~lvGptGvGKTTTiaKLA~~~~ 31 (207)
T d1okkd2 9 VLVVGVNGVGKTTTIAKLGRYYQ 31 (207)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHH
Confidence 77999999999998766676553
No 193
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=96.57 E-value=0.0029 Score=59.72 Aligned_cols=25 Identities=24% Similarity=0.286 Sum_probs=19.7
Q ss_pred CCceEEEcCCCCChHHHHHHHHHHh
Q psy11254 524 PKGCLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 524 ~~~~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
+.-++|+||+|+||||++--+|..+
T Consensus 6 ~~vi~lvGptGvGKTTTiaKLA~~~ 30 (207)
T d1okkd2 6 GRVVLVVGVNGVGKTTTIAKLGRYY 30 (207)
T ss_dssp SSEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHH
Confidence 4557899999999998766567655
No 194
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=96.56 E-value=0.00039 Score=64.05 Aligned_cols=29 Identities=21% Similarity=0.310 Sum_probs=24.3
Q ss_pred CceEEcCCCChHHHHHHHHHHhcCCCcee
Q psy11254 207 GCLLYGPPGTGKTLLARAVASQLDANFLK 235 (741)
Q Consensus 207 GvlL~Gp~GtGKTtL~r~ia~~l~~~~~~ 235 (741)
-+++.|||||||||+++.|+..++.....
T Consensus 3 iI~i~G~~GsGKsT~~~~L~~~l~~~~~~ 31 (190)
T d1khta_ 3 VVVVTGVPGVGSTTSSQLAMDNLRKEGVN 31 (190)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHTTTCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHcCCC
Confidence 36799999999999999999988665443
No 195
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=96.55 E-value=0.00065 Score=64.89 Aligned_cols=34 Identities=21% Similarity=0.456 Sum_probs=27.8
Q ss_pred eEEEcCCCCChHHHHHHHHHHhCccEEEEechhhhc
Q psy11254 527 CLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562 (741)
Q Consensus 527 ~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~~ 562 (741)
|.+-|||||||||+|+.||..++.++ ++.++++.
T Consensus 6 IaIdGp~GsGKgT~ak~La~~lg~~~--istGdl~R 39 (223)
T d1q3ta_ 6 IAIDGPASSGKSTVAKIIAKDFGFTY--LDTGAMYR 39 (223)
T ss_dssp EEEECSSCSSHHHHHHHHHHHHCCEE--EEHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCcE--ECHHHHHH
Confidence 56779999999999999999998775 46565544
No 196
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=96.53 E-value=0.0038 Score=64.24 Aligned_cols=18 Identities=39% Similarity=0.650 Sum_probs=15.2
Q ss_pred ceEEcCCCChHHHHHHHH
Q psy11254 208 CLLYGPPGTGKTLLARAV 225 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~i 225 (741)
++|.|||||||||++..+
T Consensus 166 ~vI~G~pGTGKTt~i~~~ 183 (359)
T d1w36d1 166 SVISGGPGTGKTTTVAKL 183 (359)
T ss_dssp EEEECCTTSTHHHHHHHH
T ss_pred EEEEcCCCCCceehHHHH
Confidence 679999999999987543
No 197
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.53 E-value=0.00021 Score=66.69 Aligned_cols=27 Identities=30% Similarity=0.336 Sum_probs=23.3
Q ss_pred CceEEEcCCCCChHHHHHHHHHHhCcc
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQLDAN 551 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~~~~ 551 (741)
.-|+|+|+|||||||+|+.||..++..
T Consensus 20 ~vI~L~G~pGSGKTTiAk~La~~l~~~ 46 (195)
T d1x6va3 20 CTVWLTGLSGAGKTTVSMALEEYLVCH 46 (195)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHhc
Confidence 447789999999999999999988643
No 198
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=96.51 E-value=0.005 Score=53.63 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=24.4
Q ss_pred CceEEEcCCCCChHHHHHHHHHHhCccEEEEec
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQLDANFLKVVS 557 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~ 557 (741)
...++.+|.|+|||+++-.++...+...+.+.+
T Consensus 9 ~~~ll~apTGsGKT~~~~~~~~~~~~~vli~~P 41 (136)
T d1a1va1 9 QVAHLHAPTGSGKSTKVPAAYAAQGYKVLVLNP 41 (136)
T ss_dssp EEEEEECCTTSCTTTHHHHHHHTTTCCEEEEES
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHcCCcEEEEcC
Confidence 457899999999999887666666655555543
No 199
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.51 E-value=0.00069 Score=66.91 Aligned_cols=23 Identities=30% Similarity=0.525 Sum_probs=19.1
Q ss_pred ceEEcCCCChHHHHHHHHHHhcC
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLD 230 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~ 230 (741)
+.|+||||||||+++-.++....
T Consensus 63 ~e~~G~~~~GKT~l~l~~~~~~q 85 (269)
T d1mo6a1 63 IEIYGPESSGKTTVALHAVANAQ 85 (269)
T ss_dssp EEEECSSSSSHHHHHHHHHHHHH
T ss_pred EEEecCCCcHHHHHHHHHHHHHh
Confidence 67999999999999877666543
No 200
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=96.49 E-value=0.00092 Score=66.25 Aligned_cols=24 Identities=29% Similarity=0.411 Sum_probs=20.1
Q ss_pred CCC--ceEEcCCCChHHHHHHHHHHh
Q psy11254 205 PKG--CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 205 ~~G--vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
.+| ++|.|+||+|||+++..+|-.
T Consensus 33 ~~G~l~vi~G~~G~GKT~~~~~la~~ 58 (277)
T d1cr2a_ 33 RGGEVIMVTSGSGMGKSTFVRQQALQ 58 (277)
T ss_dssp CTTCEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHh
Confidence 345 779999999999999888854
No 201
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.46 E-value=0.0012 Score=61.23 Aligned_cols=26 Identities=27% Similarity=0.247 Sum_probs=22.6
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCc
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANF 233 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~ 233 (741)
|++.||+|||||||++.|+..++...
T Consensus 25 IgI~G~~GSGKSTla~~L~~~l~~~~ 50 (198)
T d1rz3a_ 25 LGIDGLSRSGKTTLANQLSQTLREQG 50 (198)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHhcccc
Confidence 67999999999999999998776543
No 202
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.42 E-value=0.0021 Score=63.24 Aligned_cols=124 Identities=18% Similarity=0.166 Sum_probs=62.1
Q ss_pred CCCCCCceEEEcCCCCChHHHHHHHHHHh---CccEEEEechhhh----------------ccccchHHHHHHHHHHHHH
Q psy11254 520 GITPPKGCLLYGPPGTGKTLLARAVASQL---DANFLKVVSSAIV----------------DKYIGESARLIREMFNYAR 580 (741)
Q Consensus 520 ~~~~~~~~ll~G~~G~GKt~l~~~~a~~~---~~~~~~v~~~~l~----------------~~~~g~s~~~i~~~f~~a~ 580 (741)
|++.++-..|+||||||||++|-.++... +...+.++...-+ --.....++.+..+-...+
T Consensus 56 G~~~g~i~e~~G~~~~GKT~l~l~~~~~~q~~g~~~vyIDtE~~~~~e~a~~~GvD~d~il~~~~~~~E~~~~~~~~l~~ 135 (269)
T d1mo6a1 56 GLPRGRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGEQALEIADMLIR 135 (269)
T ss_dssp SBCSSSEEEEECSSSSSHHHHHHHHHHHHHHTTCEEEEEESSCCCCHHHHHHHTCCGGGCEEECCSSHHHHHHHHHHHHH
T ss_pred CcccceeEEEecCCCcHHHHHHHHHHHHHhcCCCEEEEEECCccCCHHHHHHhCCCHHHeEEecCCCHHHHHHHHHHHHh
Confidence 56777779999999999999976555443 4444555433211 1111122222222222223
Q ss_pred hcCCeEEEEcccccccCCCCCCCC---cccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCC
Q psy11254 581 NHQPCIIFMDEIDAIGGRRFSEGT---SADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLD 643 (741)
Q Consensus 581 ~~~p~Vl~iDE~d~~~~~r~~~~~---~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld 643 (741)
...++++++|-+.++.++..-.+. .......+.+..++..+...-...++.+|++.+-...++
T Consensus 136 ~~~~~liIiDSi~al~~~~E~e~~~~~~~~~~~a~~l~~~l~~l~~~~~~~~~~vi~~NQv~~~~~ 201 (269)
T d1mo6a1 136 SGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLRDKIG 201 (269)
T ss_dssp TTCEEEEEEECSTTCCCHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-----
T ss_pred cCCCCEEEEecccccccHHHhccccccchHHHHHHHHHHHHHHHHHHHhhcCchhhhhheeeccCc
Confidence 456889999999988753221111 111122344555555444333333566777754344433
No 203
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=96.34 E-value=0.016 Score=54.41 Aligned_cols=23 Identities=35% Similarity=0.408 Sum_probs=19.1
Q ss_pred ceEEcCCCChHHHHHHHHHHhcC
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLD 230 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~ 230 (741)
++|+||+|+||||.+--||..+.
T Consensus 13 i~lvGp~GvGKTTTiaKLA~~~~ 35 (207)
T d1ls1a2 13 WFLVGLQGSGKTTTAAKLALYYK 35 (207)
T ss_dssp EEEECCTTTTHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHH
Confidence 67899999999988777776653
No 204
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.33 E-value=0.0034 Score=58.85 Aligned_cols=24 Identities=25% Similarity=0.492 Sum_probs=21.7
Q ss_pred ceEEEcCCCCChHHHHHHHHHHhC
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQLD 549 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~~ 549 (741)
=++++|.||+||||+|+.|+..++
T Consensus 4 li~l~GlpgsGKSTla~~L~~~l~ 27 (213)
T d1bifa1 4 LIVMVGLPARGKTYISKKLTRYLN 27 (213)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Confidence 378999999999999999998875
No 205
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=96.26 E-value=0.00081 Score=68.43 Aligned_cols=72 Identities=15% Similarity=0.238 Sum_probs=48.9
Q ss_pred CCCceEEEcCCCCChHHHHHHHHHHhCcc--EEEE-echhhhc-------cccchHHHHHHHHHHHHHhcCCeEEEEccc
Q psy11254 523 PPKGCLLYGPPGTGKTLLARAVASQLDAN--FLKV-VSSAIVD-------KYIGESARLIREMFNYARNHQPCIIFMDEI 592 (741)
Q Consensus 523 ~~~~~ll~G~~G~GKt~l~~~~a~~~~~~--~~~v-~~~~l~~-------~~~g~s~~~i~~~f~~a~~~~p~Vl~iDE~ 592 (741)
.+.+++++||+||||||+++++++..... .+.+ +..++.- ...+..+-....++..+..+.|..+++.|+
T Consensus 165 ~~~nili~G~tgSGKTT~l~al~~~i~~~~rivtiEd~~El~l~~~~~~~~~~~~~~~~~~~ll~~~lR~~pd~iivgEi 244 (323)
T d1g6oa_ 165 IGKNVIVCGGTGSGKTTYIKSIMEFIPKEERIISIEDTEEIVFKHHKNYTQLFFGGNITSADCLKSCLRMRPDRIILGEL 244 (323)
T ss_dssp HTCCEEEEESTTSSHHHHHHHHGGGSCTTCCEEEEESSCCCCCSSCSSEEEEECBTTBCHHHHHHHHTTSCCSEEEESCC
T ss_pred hCCCEEEEeeccccchHHHHHHhhhcccccceeeccchhhhhcccccccceeccccchhHHHHHHHHhccCCCcccCCcc
Confidence 34679999999999999999999988654 3333 1222210 111122223567888888899999999997
Q ss_pred cc
Q psy11254 593 DA 594 (741)
Q Consensus 593 d~ 594 (741)
-.
T Consensus 245 R~ 246 (323)
T d1g6oa_ 245 RS 246 (323)
T ss_dssp CS
T ss_pred Cc
Confidence 53
No 206
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=96.24 E-value=0.0046 Score=58.43 Aligned_cols=26 Identities=35% Similarity=0.340 Sum_probs=16.3
Q ss_pred CCCceEEEcCCCCChHHHHHHHHHHh
Q psy11254 523 PPKGCLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 523 ~~~~~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
.|.-++|+||+|+||||++.-||..+
T Consensus 11 ~p~vi~lvGptGvGKTTTiAKLA~~~ 36 (211)
T d1j8yf2 11 IPYVIMLVGVQGTGKATTAGKLAYFY 36 (211)
T ss_dssp SSEEEEEECSCCC----HHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHH
Confidence 34558899999999999766666555
No 207
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=96.16 E-value=0.00098 Score=61.51 Aligned_cols=27 Identities=30% Similarity=0.452 Sum_probs=23.0
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCce
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANFL 234 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~~ 234 (741)
+++.|+|||||||+++.|+..++....
T Consensus 4 ivi~G~~GsGKTT~~~~La~~L~~~~~ 30 (194)
T d1nksa_ 4 GIVTGIPGVGKSTVLAKVKEILDNQGI 30 (194)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHTTTC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHcCC
Confidence 468899999999999999998865543
No 208
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.15 E-value=0.003 Score=66.04 Aligned_cols=70 Identities=9% Similarity=0.144 Sum_probs=51.8
Q ss_pred hhhhhcchHHHHHHHHHHHHH--hcCCeEEEeccccccccccCCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeC
Q psy11254 276 IVDKYIGESARLIREMFNYAR--NHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATN 353 (741)
Q Consensus 276 ~~~~~~G~~~~~v~~~~~~A~--~~~P~ILllDEid~l~~~~~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~ 353 (741)
.+...|||++..+.-++..|+ ...+.+++||| |.+++|+.....+.++|..+.. .+.-+|++||
T Consensus 329 ~~~~lSgGEk~~~~lal~lal~~~~~~pililDE----------~d~~Ld~~~~~~~~~~l~~~~~----~~~Q~I~iTH 394 (427)
T d1w1wa_ 329 DMEYLSGGEKTVAALALLFAINSYQPSPFFVLDE----------VDAALDITNVQRIAAYIRRHRN----PDLQFIVISL 394 (427)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHHTSSCCSEEEESS----------TTTTCCHHHHHHHHHHHHHHCB----TTBEEEEECS
T ss_pred hhhhhccchHHHHHHHHHHHHhcCCCCCEEEEeC----------CCCCCCHHHHHHHHHHHHHHhC----CCCEEEEEeC
Confidence 446678888776533333333 34556999999 8899999999999999987743 3457999999
Q ss_pred CCCCCC
Q psy11254 354 RPDTLD 359 (741)
Q Consensus 354 ~~~~ld 359 (741)
+|..++
T Consensus 395 ~~~~~~ 400 (427)
T d1w1wa_ 395 KNTMFE 400 (427)
T ss_dssp CHHHHT
T ss_pred CHHHHH
Confidence 988766
No 209
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=96.06 E-value=0.021 Score=53.59 Aligned_cols=23 Identities=35% Similarity=0.337 Sum_probs=18.6
Q ss_pred ceEEEcCCCCChHHHHHHHHHHh
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
-++|+||+|+||||++.-||..+
T Consensus 12 vi~lvGp~GvGKTTTiaKLA~~~ 34 (207)
T d1ls1a2 12 LWFLVGLQGSGKTTTAAKLALYY 34 (207)
T ss_dssp EEEEECCTTTTHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 36789999999999777677655
No 210
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=96.05 E-value=0.0015 Score=59.11 Aligned_cols=23 Identities=30% Similarity=0.294 Sum_probs=21.1
Q ss_pred eEEEcCCCCChHHHHHHHHHHhC
Q psy11254 527 CLLYGPPGTGKTLLARAVASQLD 549 (741)
Q Consensus 527 ~ll~G~~G~GKt~l~~~~a~~~~ 549 (741)
++|+|+||||||||++.++..+.
T Consensus 5 i~itG~~GSGKTTL~~~L~~~l~ 27 (170)
T d1np6a_ 5 LAFAAWSGTGKTTLLKKLIPALC 27 (170)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCHHHHHHHHHHHHH
Confidence 68999999999999999998873
No 211
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=96.03 E-value=0.027 Score=52.94 Aligned_cols=26 Identities=35% Similarity=0.479 Sum_probs=20.2
Q ss_pred CCCceEEEcCCCCChHHHHHHHHHHh
Q psy11254 523 PPKGCLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 523 ~~~~~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
.|.-++|+||+|+||||.+.-+|..+
T Consensus 10 ~p~vi~lvGptGvGKTTTiAKLAa~~ 35 (213)
T d1vmaa2 10 PPFVIMVVGVNGTGKTTSCGKLAKMF 35 (213)
T ss_dssp SCEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHH
Confidence 44558899999999999766666555
No 212
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.99 E-value=0.0017 Score=60.37 Aligned_cols=27 Identities=30% Similarity=0.593 Sum_probs=23.0
Q ss_pred CceEEcCCCChHHHHHHHHHHhcCCCc
Q psy11254 207 GCLLYGPPGTGKTLLARAVASQLDANF 233 (741)
Q Consensus 207 GvlL~Gp~GtGKTtL~r~ia~~l~~~~ 233 (741)
-++|+||+|+|||||++.++......+
T Consensus 3 pIvl~GpsG~GK~tl~~~L~~~~~~~~ 29 (186)
T d1gkya_ 3 PIVISGPSGTGKSTLLKKLFAEYPDSF 29 (186)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHCTTTE
T ss_pred eEEEECCCCCCHHHHHHHHHHhCCcce
Confidence 378999999999999999998875443
No 213
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=95.98 E-value=0.0039 Score=63.25 Aligned_cols=97 Identities=18% Similarity=0.194 Sum_probs=46.1
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCceeeecc-cccchhhHHHHHhhhhhhhcccccccccccCCCccchhhhhcchHHH
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANFLKVVSS-LFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESAR 286 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~ 286 (741)
+++.||||+|||||+..++..+.....++..- .......+-+.+.++.. |........+. ...+.......|+...
T Consensus 57 IgitG~pGaGKSTLi~~l~~~~~~~g~~vavlavDpss~~~ggailgdr~--rm~~~~~~~~~-~ir~~~~~g~lgg~~~ 133 (327)
T d2p67a1 57 LGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKT--RMNDLARAEAA-FIRPVPSSGHLGGASQ 133 (327)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC-----------------CTTTTCTTE-EEEEECC-----CHHH
T ss_pred EEeeCCCCCCHHHHHHHHHHHHHhcCCceeeecCCCceeeeccccccchh--HHHHhcccccc-cccccccccccccchh
Confidence 78999999999999999997764332222110 00111111122222221 11110000000 0012222345677777
Q ss_pred HHHHHHHHHHhcCCeEEEecc
Q psy11254 287 LIREMFNYARNHQPCIIFMDE 307 (741)
Q Consensus 287 ~v~~~~~~A~~~~P~ILllDE 307 (741)
...+++..+.....+++|+.-
T Consensus 134 ~~~~~~~~~~~~g~d~iliEt 154 (327)
T d2p67a1 134 RARELMLLCEAAGYDVVIVET 154 (327)
T ss_dssp HHHHHHHHHHHTTCSEEEEEE
T ss_pred hhhHHHHHHHhcCCCeEEEee
Confidence 777888888888889999987
No 214
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=95.98 E-value=0.0017 Score=60.08 Aligned_cols=23 Identities=26% Similarity=0.596 Sum_probs=20.8
Q ss_pred ceEEcCCCChHHHHHHHHHHhcC
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLD 230 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~ 230 (741)
++|+||||+|||||++.+.....
T Consensus 5 ivl~GpsG~GK~tl~~~L~~~~~ 27 (182)
T d1znwa1 5 VVLSGPSAVGKSTVVRCLRERIP 27 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHHHST
T ss_pred EEEECCCCCCHHHHHHHHHhhCC
Confidence 67999999999999999998764
No 215
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=95.96 E-value=0.0091 Score=56.30 Aligned_cols=23 Identities=35% Similarity=0.397 Sum_probs=14.5
Q ss_pred ceEEcCCCChHHHHHHHHHHhcC
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLD 230 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~ 230 (741)
++|+||+|+||||.+-=||..+.
T Consensus 15 i~lvGptGvGKTTTiAKLA~~~~ 37 (211)
T d1j8yf2 15 IMLVGVQGTGKATTAGKLAYFYK 37 (211)
T ss_dssp EEEECSCCC----HHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHH
Confidence 77999999999998666665553
No 216
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=95.96 E-value=0.0028 Score=66.34 Aligned_cols=72 Identities=21% Similarity=0.224 Sum_probs=48.2
Q ss_pred CCCceEEEcCCCCChHHHHHHHHHHhCc---cEEEEe-chhhhccc------cchHHHHHHHHHHHHHhcCCeEEEEccc
Q psy11254 523 PPKGCLLYGPPGTGKTLLARAVASQLDA---NFLKVV-SSAIVDKY------IGESARLIREMFNYARNHQPCIIFMDEI 592 (741)
Q Consensus 523 ~~~~~ll~G~~G~GKt~l~~~~a~~~~~---~~~~v~-~~~l~~~~------~g~s~~~i~~~f~~a~~~~p~Vl~iDE~ 592 (741)
+..-+++.||.|+||||++.++...+.. +++.+- +.+..-.. .+.........+..+..+.|.||++.|+
T Consensus 157 ~~GliLvtGpTGSGKSTTl~~~l~~~~~~~~~i~tiEdPiE~~~~~~~q~~v~~~~~~~~~~~l~~~lR~dPDvi~igEi 236 (401)
T d1p9ra_ 157 PHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEI 236 (401)
T ss_dssp SSEEEEEECSTTSCHHHHHHHHHHHHCCTTSCEEEEESSCCSCCSSSEEEECBGGGTBCHHHHHHHHGGGCCSEEEESCC
T ss_pred hhceEEEEcCCCCCccHHHHHHhhhhcCCCceEEEeccCcccccCCCCeeeecCCcCCCHHHHHHHHHhhcCCEEEecCc
Confidence 3334788999999999999988887743 355552 22221111 1222334567777888899999999998
Q ss_pred cc
Q psy11254 593 DA 594 (741)
Q Consensus 593 d~ 594 (741)
-.
T Consensus 237 Rd 238 (401)
T d1p9ra_ 237 RD 238 (401)
T ss_dssp CS
T ss_pred CC
Confidence 74
No 217
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=95.92 E-value=0.0016 Score=59.65 Aligned_cols=25 Identities=24% Similarity=0.381 Sum_probs=22.3
Q ss_pred ceEEEcCCCCChHHHHHHHHHHhCc
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQLDA 550 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~~~ 550 (741)
-|+|.|+|||||||+++.|+..++.
T Consensus 3 iI~i~G~~GsGKsT~~~~L~~~l~~ 27 (190)
T d1khta_ 3 VVVVTGVPGVGSTTSSQLAMDNLRK 27 (190)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999998854
No 218
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.88 E-value=0.002 Score=60.15 Aligned_cols=26 Identities=31% Similarity=0.591 Sum_probs=22.6
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCc
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANF 233 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~ 233 (741)
++|+||+|+|||||++.|+...+..+
T Consensus 3 Ivl~GPsGsGK~tl~~~L~~~~~~~~ 28 (190)
T d1lvga_ 3 VVLSGPSGAGKSTLLKKLFQEHSSIF 28 (190)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHTTTE
T ss_pred EEEECCCCCCHHHHHHHHHHhCCCce
Confidence 67999999999999999998875544
No 219
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=95.86 E-value=0.00094 Score=67.63 Aligned_cols=57 Identities=19% Similarity=0.297 Sum_probs=38.2
Q ss_pred hcCCeEEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCCccccCCCCcceEEEc
Q psy11254 581 NHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEI 658 (741)
Q Consensus 581 ~~~p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld~al~rpgR~d~~i~~ 658 (741)
...+.+++|||++. +-++..++.+.++|..+..- .+ -+|+|||.|+.++. +|.++.+
T Consensus 300 ~~~~~illiDEpe~----------~Lh~~~~~~l~~~l~~~~~~---~~-QviitTHs~~~~~~-------~d~~~~v 356 (369)
T g1ii8.1 300 AGEISLLILDEPTP----------YLDEERRRKLITIMERYLKK---IP-QVILVSHDEELKDA-------ADHVIRI 356 (369)
T ss_dssp HSSCSEEEEECCSS----------SSCSHHHHHHHHHHHHTGGG---SS-EEEEEESCGGGGGT-------SSEEEEE
T ss_pred CCCCCEEEEECCCC----------CCCHHHHHHHHHHHHHHHhc---CC-EEEEEechHHHHHh-------CCEEEEE
Confidence 35678999999886 34566677777778776321 11 27888999876653 4565555
No 220
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=95.75 E-value=0.02 Score=49.52 Aligned_cols=24 Identities=25% Similarity=0.297 Sum_probs=18.3
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCC
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDA 231 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~ 231 (741)
.+|.+|.|+|||+++-.++...+.
T Consensus 11 ~ll~apTGsGKT~~~~~~~~~~~~ 34 (136)
T d1a1va1 11 AHLHAPTGSGKSTKVPAAYAAQGY 34 (136)
T ss_dssp EEEECCTTSCTTTHHHHHHHTTTC
T ss_pred EEEEeCCCCCHHHHHHHHHHHcCC
Confidence 679999999999988655544443
No 221
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=95.74 E-value=0.0017 Score=58.88 Aligned_cols=29 Identities=21% Similarity=0.119 Sum_probs=23.6
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCceee
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANFLKV 236 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v 236 (741)
+.++|++|||||||+..|+..+.....++
T Consensus 4 i~I~G~~gSGKTTli~~l~~~L~~~g~~v 32 (165)
T d1xjca_ 4 WQVVGYKHSGKTTLMEKWVAAAVREGWRV 32 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHHTTCCE
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHhCCCeE
Confidence 46999999999999999998886544344
No 222
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=95.71 E-value=0.00034 Score=65.36 Aligned_cols=34 Identities=21% Similarity=0.119 Sum_probs=25.9
Q ss_pred hhhCCCCCCC-ceEEcCCCChHHHHHHHHHHhcCC
Q psy11254 198 QRVGITPPKG-CLLYGPPGTGKTLLARAVASQLDA 231 (741)
Q Consensus 198 ~~~~l~~~~G-vlL~Gp~GtGKTtL~r~ia~~l~~ 231 (741)
.+..+++.+| .+|+|||||||||++.||.-.+..
T Consensus 16 ~~~~i~f~~~~tvi~G~NGsGKStil~Ai~~~L~g 50 (222)
T d1qhla_ 16 FARTFDLDELVTTLSGGNGAGKSTTMAAFVTALIP 50 (222)
T ss_dssp EEEEECHHHHHHHHHSCCSHHHHHHHHHHHHHHSC
T ss_pred eeEEEEcCCCeEEEECCCCCCHHHHHHHHHHHhcC
Confidence 3344555556 669999999999999999876643
No 223
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=95.66 E-value=0.012 Score=58.51 Aligned_cols=67 Identities=13% Similarity=0.177 Sum_probs=48.7
Q ss_pred hhhcchHHHHHHHHHHH--HHhcCCeEEEeccccccccccCCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCC
Q psy11254 278 DKYIGESARLIREMFNY--ARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRP 355 (741)
Q Consensus 278 ~~~~G~~~~~v~~~~~~--A~~~~P~ILllDEid~l~~~~~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~ 355 (741)
..+++|.+.....++.. .....|.++++|| |.+++++..++.+.+++..+.. +.-||+|||+|
T Consensus 218 ~~~~~g~~~l~~~~~~~~~~~~~~~~~~~iDE----------pe~~Lhp~~~~~l~~~l~~~~~-----~~QviitTHsp 282 (308)
T d1e69a_ 218 SLLSGGEKALVGLALLFALMEIKPSPFYVLDE----------VDSPLDDYNAERFKRLLKENSK-----HTQFIVITHNK 282 (308)
T ss_dssp GGSCHHHHHHHHHHHHHHHTTTSCCSEEEEES----------CCSSCCHHHHHHHHHHHHHHTT-----TSEEEEECCCT
T ss_pred hhhhHHHhhHHHHHhhhhhhhhccCchhhhhh----------ccccCCHHHHHHHHHHHHHhcc-----CCEEEEEECCH
Confidence 44455544433222222 2346788999999 8889999999999999987753 45799999999
Q ss_pred CCCC
Q psy11254 356 DTLD 359 (741)
Q Consensus 356 ~~ld 359 (741)
..++
T Consensus 283 ~~~~ 286 (308)
T d1e69a_ 283 IVME 286 (308)
T ss_dssp TGGG
T ss_pred HHHH
Confidence 9887
No 224
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=95.61 E-value=0.0025 Score=58.99 Aligned_cols=25 Identities=28% Similarity=0.325 Sum_probs=21.9
Q ss_pred eEEEcCCCCChHHHHHHHHHHhCcc
Q psy11254 527 CLLYGPPGTGKTLLARAVASQLDAN 551 (741)
Q Consensus 527 ~ll~G~~G~GKt~l~~~~a~~~~~~ 551 (741)
|.+.||+||||||+|+.|+..++..
T Consensus 25 IgI~G~~GSGKSTla~~L~~~l~~~ 49 (198)
T d1rz3a_ 25 LGIDGLSRSGKTTLANQLSQTLREQ 49 (198)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHhccc
Confidence 6689999999999999999887643
No 225
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=95.55 E-value=0.0062 Score=59.97 Aligned_cols=38 Identities=18% Similarity=0.196 Sum_probs=28.2
Q ss_pred cCCCCCCceEEEcCCCCChHHHHHHHHHHh----CccEEEEe
Q psy11254 519 VGITPPKGCLLYGPPGTGKTLLARAVASQL----DANFLKVV 556 (741)
Q Consensus 519 ~~~~~~~~~ll~G~~G~GKt~l~~~~a~~~----~~~~~~v~ 556 (741)
.|+.++.-++|.|+||+|||+++..+|-.. +.+...++
T Consensus 30 ~G~~~G~l~vi~G~~G~GKT~~~~~la~~~a~~~g~~v~~~s 71 (277)
T d1cr2a_ 30 LGARGGEVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAM 71 (277)
T ss_dssp CSBCTTCEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEE
T ss_pred cCCCCCeEEEEEeCCCCCHHHHHHHHHHhhhhhcccceeEee
Confidence 367888889999999999999888777432 44544443
No 226
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.54 E-value=0.0027 Score=60.05 Aligned_cols=25 Identities=20% Similarity=0.288 Sum_probs=22.3
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCC
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDAN 232 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~ 232 (741)
+++.||+||||||+++.|+..++..
T Consensus 5 IgI~G~~gSGKSTla~~L~~~l~~~ 29 (213)
T d1uj2a_ 5 IGVSGGTASGKSSVCAKIVQLLGQN 29 (213)
T ss_dssp EEEECSTTSSHHHHHHHHHHHTTGG
T ss_pred EEEECCCCCCHHHHHHHHHHHhchh
Confidence 5699999999999999999988654
No 227
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.51 E-value=0.0077 Score=57.56 Aligned_cols=28 Identities=29% Similarity=0.381 Sum_probs=24.1
Q ss_pred CCCCCCceEEEcCCCCChHHHHHHHHHH
Q psy11254 520 GITPPKGCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 520 ~~~~~~~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
|+++++-++|+||||||||+++-.++..
T Consensus 30 Gi~~G~~~li~G~pGsGKT~l~lq~~~~ 57 (251)
T d1szpa2 30 GVETGSITELFGEFRTGKSQLCHTLAVT 57 (251)
T ss_dssp SEESSSEEEEEESTTSSHHHHHHHHTTT
T ss_pred CCcCCeEEEEEcCCCCCHHHHHHHHHHH
Confidence 5788888999999999999999877643
No 228
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=95.49 E-value=0.0022 Score=58.97 Aligned_cols=25 Identities=32% Similarity=0.520 Sum_probs=22.1
Q ss_pred eEEEcCCCCChHHHHHHHHHHhCcc
Q psy11254 527 CLLYGPPGTGKTLLARAVASQLDAN 551 (741)
Q Consensus 527 ~ll~G~~G~GKt~l~~~~a~~~~~~ 551 (741)
++|.|+||+||||+++.|++.++..
T Consensus 4 ivi~G~~GsGKTT~~~~La~~L~~~ 28 (194)
T d1nksa_ 4 GIVTGIPGVGKSTVLAKVKEILDNQ 28 (194)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHc
Confidence 5789999999999999999988543
No 229
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=95.46 E-value=0.0026 Score=58.12 Aligned_cols=31 Identities=26% Similarity=0.406 Sum_probs=23.7
Q ss_pred hhhCCCCCCC-ceEEcCCCChHHHHHHHHHHh
Q psy11254 198 QRVGITPPKG-CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 198 ~~~~l~~~~G-vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
+-+++....+ ++|+|++|||||||++.+.+.
T Consensus 5 ~~~~~~~k~~kI~lvG~~~vGKTsLl~~l~~~ 36 (186)
T d1f6ba_ 5 QFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDD 36 (186)
T ss_dssp HHHTCTTCCEEEEEEEETTSSHHHHHHHHSCC
T ss_pred HhccccCCCCEEEEECCCCCCHHHHHHHHhCC
Confidence 3344444444 899999999999999998764
No 230
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=95.44 E-value=0.0032 Score=59.58 Aligned_cols=25 Identities=36% Similarity=0.518 Sum_probs=21.8
Q ss_pred CCC--ceEEcCCCChHHHHHHHHHHhc
Q psy11254 205 PKG--CLLYGPPGTGKTLLARAVASQL 229 (741)
Q Consensus 205 ~~G--vlL~Gp~GtGKTtL~r~ia~~l 229 (741)
.+| +.|.|.||+||||+++.|+..+
T Consensus 22 ~kg~vIwltGlsGsGKTTia~~L~~~l 48 (208)
T d1m7ga_ 22 QRGLTIWLTGLSASGKSTLAVELEHQL 48 (208)
T ss_dssp SSCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 456 7799999999999999999766
No 231
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=95.39 E-value=0.014 Score=56.16 Aligned_cols=26 Identities=31% Similarity=0.415 Sum_probs=21.2
Q ss_pred CCCC--ceEEcCCCChHHHHHHHHHHhc
Q psy11254 204 PPKG--CLLYGPPGTGKTLLARAVASQL 229 (741)
Q Consensus 204 ~~~G--vlL~Gp~GtGKTtL~r~ia~~l 229 (741)
+|+| ++++|||||||||++--++...
T Consensus 33 lp~G~~~li~G~pGsGKT~~~lq~~~~~ 60 (254)
T d1pzna2 33 IETQAITEVFGEFGSGKTQLAHTLAVMV 60 (254)
T ss_dssp EESSEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred ccCCEEEEEEcCCCCCHHHHHHHHHHHh
Confidence 3455 8899999999999999777554
No 232
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=95.35 E-value=0.0058 Score=57.72 Aligned_cols=37 Identities=24% Similarity=0.270 Sum_probs=29.8
Q ss_pred CCceEEEcCCCCChHHHHHHHHHHh----CccEEEEechhh
Q psy11254 524 PKGCLLYGPPGTGKTLLARAVASQL----DANFLKVVSSAI 560 (741)
Q Consensus 524 ~~~~ll~G~~G~GKt~l~~~~a~~~----~~~~~~v~~~~l 560 (741)
+.-+.|+|.||+||||+|+.|+..+ +.+.+.+++..+
T Consensus 24 g~vIwltGlsGsGKTTia~~L~~~l~~~~~~~~~~ldgD~i 64 (208)
T d1m7ga_ 24 GLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNI 64 (208)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCEEEECHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHhcCceEEEEcchHH
Confidence 4458899999999999999999765 456777777654
No 233
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.32 E-value=0.0036 Score=55.70 Aligned_cols=21 Identities=29% Similarity=0.414 Sum_probs=19.5
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++|+|+||+|||||++.+.+.
T Consensus 3 I~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 3 LLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 789999999999999999874
No 234
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.32 E-value=0.0057 Score=56.58 Aligned_cols=27 Identities=30% Similarity=0.593 Sum_probs=23.6
Q ss_pred ceEEEcCCCCChHHHHHHHHHHhCccE
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQLDANF 552 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~~~~~ 552 (741)
-|+|+||+|+||||+++.+++.....+
T Consensus 3 pIvl~GpsG~GK~tl~~~L~~~~~~~~ 29 (186)
T d1gkya_ 3 PIVISGPSGTGKSTLLKKLFAEYPDSF 29 (186)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHCTTTE
T ss_pred eEEEECCCCCCHHHHHHHHHHhCCcce
Confidence 489999999999999999999876544
No 235
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=95.30 E-value=0.012 Score=60.45 Aligned_cols=19 Identities=37% Similarity=0.538 Sum_probs=15.4
Q ss_pred ceEEEcCCCCChHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAV 544 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~ 544 (741)
-.+++||||||||+++..+
T Consensus 165 ~~vI~G~pGTGKTt~i~~~ 183 (359)
T d1w36d1 165 ISVISGGPGTGKTTTVAKL 183 (359)
T ss_dssp EEEEECCTTSTHHHHHHHH
T ss_pred eEEEEcCCCCCceehHHHH
Confidence 3688999999999876543
No 236
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=95.29 E-value=0.031 Score=49.52 Aligned_cols=23 Identities=30% Similarity=0.508 Sum_probs=20.2
Q ss_pred CceEEEcCCCCChHHHHHHHHHH
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
-++++.|+||+|||||..++.+.
T Consensus 2 ~kI~lvG~~nvGKSsLin~l~~~ 24 (161)
T d2gj8a1 2 MKVVIAGRPNAGKSSLLNALAGR 24 (161)
T ss_dssp EEEEEEESTTSSHHHHHHHHHTS
T ss_pred CEEEEECCCCCCHHHHHHHHhCC
Confidence 35899999999999999999754
No 237
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=95.27 E-value=0.0037 Score=55.60 Aligned_cols=21 Identities=24% Similarity=0.287 Sum_probs=19.1
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++|+|+||||||||++.+++.
T Consensus 3 ivlvG~~~vGKSsLi~~l~~~ 23 (160)
T d1r8sa_ 3 ILMVGLDAAGKTTILYKLKLG 23 (160)
T ss_dssp EEEECSTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 679999999999999999865
No 238
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.20 E-value=0.0064 Score=56.49 Aligned_cols=26 Identities=31% Similarity=0.591 Sum_probs=23.3
Q ss_pred eEEEcCCCCChHHHHHHHHHHhCccE
Q psy11254 527 CLLYGPPGTGKTLLARAVASQLDANF 552 (741)
Q Consensus 527 ~ll~G~~G~GKt~l~~~~a~~~~~~~ 552 (741)
|+|+||+|+||||+++.+++.++..+
T Consensus 3 Ivl~GPsGsGK~tl~~~L~~~~~~~~ 28 (190)
T d1lvga_ 3 VVLSGPSGAGKSTLLKKLFQEHSSIF 28 (190)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHTTTE
T ss_pred EEEECCCCCCHHHHHHHHHHhCCCce
Confidence 78999999999999999999886554
No 239
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=95.15 E-value=0.0024 Score=64.67 Aligned_cols=55 Identities=20% Similarity=0.277 Sum_probs=35.2
Q ss_pred HHHHHHHhcCCeEEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCC
Q psy11254 574 EMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLD 643 (741)
Q Consensus 574 ~~f~~a~~~~p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld 643 (741)
..+.......|.++++||++.- .++...+.+..++.+... ++=+|+||++|..++
T Consensus 237 ~~~~~~~~~~~~~~~ide~e~~----------L~~~~~~~l~~~l~~~~~-----~~Q~iitTh~~~~~~ 291 (329)
T g1xew.1 237 FVFAIQKFKPAPFYLFDEIDAH----------LDDANVKRVADLIKESSK-----ESQFIVITLRDVMMA 291 (329)
T ss_dssp HHHHHHHHSCCSEEEEESTTTT----------SCHHHHHHHHHHHHHHTT-----TSEEEEECCCHHHHH
T ss_pred HHHHHHhhcccchhhhhhHHhh----------cCHHHHHHHHHHHHHhcc-----CCeEEEEeCCHHHHH
Confidence 3344444567889999999873 344445556666666532 123788999987664
No 240
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.09 E-value=0.006 Score=56.10 Aligned_cols=28 Identities=21% Similarity=0.450 Sum_probs=22.9
Q ss_pred CCceEEcCCCChHHHHHHHHHHhcCCCc
Q psy11254 206 KGCLLYGPPGTGKTLLARAVASQLDANF 233 (741)
Q Consensus 206 ~GvlL~Gp~GtGKTtL~r~ia~~l~~~~ 233 (741)
+-++|+||+|+|||||++.|.......|
T Consensus 4 k~ivl~Gpsg~GK~tl~~~L~~~~~~~~ 31 (178)
T d1kgda_ 4 KTLVLLGAHGVGRRHIKNTLITKHPDRF 31 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHCTTTE
T ss_pred CcEEEECCCCCCHHHHHHHHHHhCCcCe
Confidence 4588999999999999999987654333
No 241
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.91 E-value=0.0072 Score=55.53 Aligned_cols=26 Identities=23% Similarity=0.516 Sum_probs=22.6
Q ss_pred CceEEEcCCCCChHHHHHHHHHHhCc
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQLDA 550 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~~~ 550 (741)
+-++|.||+|+||||+++.+.+....
T Consensus 3 ~iivl~GpsG~GK~tl~~~L~~~~~~ 28 (182)
T d1znwa1 3 RVVVLSGPSAVGKSTVVRCLRERIPN 28 (182)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHSTT
T ss_pred eEEEEECCCCCCHHHHHHHHHhhCCC
Confidence 44789999999999999999988753
No 242
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.88 E-value=0.0098 Score=55.38 Aligned_cols=29 Identities=28% Similarity=0.345 Sum_probs=25.1
Q ss_pred CCCCCCceEEEcCCCCChHHHHHHHHHHh
Q psy11254 520 GITPPKGCLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 520 ~~~~~~~~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
|++++.-++++||||+|||+++-.+|...
T Consensus 19 Gi~~G~v~~i~G~~GsGKT~l~l~la~~~ 47 (242)
T d1n0wa_ 19 GIETGSITEMFGEFRTGKTQICHTLAVTC 47 (242)
T ss_dssp SEETTSEEEEECCTTSSHHHHHHHHHHHT
T ss_pred CCcCCEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 57788889999999999999998887654
No 243
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=94.84 E-value=0.0057 Score=54.69 Aligned_cols=21 Identities=29% Similarity=0.419 Sum_probs=19.4
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++|+|+||||||||++.+.+.
T Consensus 8 I~ivG~~~vGKSSLi~~~~~~ 28 (169)
T d1upta_ 8 ILILGLDGAGKTTILYRLQVG 28 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 789999999999999999874
No 244
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=94.82 E-value=0.026 Score=48.39 Aligned_cols=20 Identities=30% Similarity=0.202 Sum_probs=16.6
Q ss_pred CCCCceEEEcCCCCChHHHH
Q psy11254 522 TPPKGCLLYGPPGTGKTLLA 541 (741)
Q Consensus 522 ~~~~~~ll~G~~G~GKt~l~ 541 (741)
..+..++|++|+|+|||..+
T Consensus 5 ~~~~~~il~~~tGsGKT~~~ 24 (140)
T d1yksa1 5 KKGMTTVLDFHPGAGKTRRF 24 (140)
T ss_dssp STTCEEEECCCTTSSTTTTH
T ss_pred HcCCcEEEEcCCCCChhHHH
Confidence 45677899999999999655
No 245
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.81 E-value=0.015 Score=52.27 Aligned_cols=21 Identities=24% Similarity=0.428 Sum_probs=19.1
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++++|++|||||||++.+.+.
T Consensus 6 i~viG~~~vGKTsli~~l~~~ 26 (166)
T d1ctqa_ 6 LVVVGAGGVGKSALTIQLIQN 26 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 689999999999999998864
No 246
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.76 E-value=0.0053 Score=57.36 Aligned_cols=22 Identities=27% Similarity=0.385 Sum_probs=19.9
Q ss_pred ceEEcCCCChHHHHHHHHHHhc
Q psy11254 208 CLLYGPPGTGKTLLARAVASQL 229 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l 229 (741)
++++||||+|||+|+-.+|...
T Consensus 26 ~~i~G~~GsGKT~l~l~la~~~ 47 (242)
T d1n0wa_ 26 TEMFGEFRTGKTQICHTLAVTC 47 (242)
T ss_dssp EEEECCTTSSHHHHHHHHHHHT
T ss_pred EEEEeCCCCCHHHHHHHHHHHH
Confidence 7899999999999999888765
No 247
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.66 E-value=0.0082 Score=56.54 Aligned_cols=26 Identities=19% Similarity=0.221 Sum_probs=22.9
Q ss_pred ceEEEcCCCCChHHHHHHHHHHhCcc
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQLDAN 551 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~~~~ 551 (741)
-|.+.||+||||||+++.|+..++..
T Consensus 4 iIgI~G~~gSGKSTla~~L~~~l~~~ 29 (213)
T d1uj2a_ 4 LIGVSGGTASGKSSVCAKIVQLLGQN 29 (213)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHTTGG
T ss_pred EEEEECCCCCCHHHHHHHHHHHhchh
Confidence 46789999999999999999998653
No 248
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.65 E-value=0.041 Score=54.09 Aligned_cols=22 Identities=27% Similarity=0.616 Sum_probs=19.6
Q ss_pred ceEEcCCCChHHHHHHHHHHhc
Q psy11254 208 CLLYGPPGTGKTLLARAVASQL 229 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l 229 (741)
++|.|++|||||||++.|...+
T Consensus 30 IGi~G~qGSGKSTl~~~l~~~L 51 (286)
T d1odfa_ 30 IFFSGPQGSGKSFTSIQIYNHL 51 (286)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEeECCCCCCHHHHHHHHHHHH
Confidence 6799999999999999887665
No 249
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=94.54 E-value=0.011 Score=55.64 Aligned_cols=23 Identities=26% Similarity=0.473 Sum_probs=20.5
Q ss_pred ceEEcCCCChHHHHHHHHHHhcC
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLD 230 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~ 230 (741)
++|+||+|+|||||.+.|.....
T Consensus 5 ivi~GPSG~GK~tl~~~L~~~~p 27 (205)
T d1s96a_ 5 YIVSAPSGAGKSSLIQALLKTQP 27 (205)
T ss_dssp EEEECCTTSCHHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHhhCC
Confidence 67999999999999999988754
No 250
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=94.49 E-value=0.034 Score=50.37 Aligned_cols=22 Identities=23% Similarity=0.329 Sum_probs=19.9
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
.|+|.|.+|+|||+|+.++.+.
T Consensus 7 ~I~lvG~~~~GKSSLin~l~~~ 28 (178)
T d1wf3a1 7 FVAIVGKPNVGKSTLLNNLLGV 28 (178)
T ss_dssp EEEEECSTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4899999999999999999864
No 251
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=94.48 E-value=0.0064 Score=55.59 Aligned_cols=21 Identities=19% Similarity=0.368 Sum_probs=19.4
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
|+|+|+||+|||||+++|.|.
T Consensus 3 I~lvG~~nvGKSsLin~l~~~ 23 (184)
T d2cxxa1 3 IIFAGRSNVGKSTLIYRLTGK 23 (184)
T ss_dssp EEEEEBTTSSHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 689999999999999999874
No 252
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.44 E-value=0.0084 Score=57.27 Aligned_cols=25 Identities=32% Similarity=0.436 Sum_probs=20.4
Q ss_pred CCCC--ceEEcCCCChHHHHHHHHHHh
Q psy11254 204 PPKG--CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 204 ~~~G--vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
+++| ++|+||||||||||+--++..
T Consensus 31 i~~G~~~li~G~pGsGKT~l~lq~~~~ 57 (251)
T d1szpa2 31 VETGSITELFGEFRTGKSQLCHTLAVT 57 (251)
T ss_dssp EESSSEEEEEESTTSSHHHHHHHHTTT
T ss_pred CcCCeEEEEEcCCCCCHHHHHHHHHHH
Confidence 3445 889999999999999887743
No 253
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=94.44 E-value=0.008 Score=57.52 Aligned_cols=23 Identities=30% Similarity=0.548 Sum_probs=19.9
Q ss_pred ceEEcCCCChHHHHHHHHHHhcC
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLD 230 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~ 230 (741)
+++.||+|+|||||++.|...+.
T Consensus 3 i~v~G~~GsGKTTLl~~ll~~~~ 25 (244)
T d1yrba1 3 VVFVGTAGSGKTTLTGEFGRYLE 25 (244)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHT
T ss_pred EEEEcCCCCcHHHHHHHHHHHHh
Confidence 46899999999999999987553
No 254
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.40 E-value=0.0092 Score=55.67 Aligned_cols=24 Identities=25% Similarity=0.450 Sum_probs=21.1
Q ss_pred CCceEEcCCCChHHHHHHHHHHhc
Q psy11254 206 KGCLLYGPPGTGKTLLARAVASQL 229 (741)
Q Consensus 206 ~GvlL~Gp~GtGKTtL~r~ia~~l 229 (741)
+.++|+|+||+|||||++.|.+.-
T Consensus 4 p~V~lvG~~n~GKTSLln~l~~~~ 27 (209)
T d1nrjb_ 4 PSIIIAGPQNSGKTSLLTLLTTDS 27 (209)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHSS
T ss_pred CEEEEECCCCCCHHHHHHHHhCCC
Confidence 358899999999999999998753
No 255
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=94.40 E-value=0.007 Score=54.85 Aligned_cols=21 Identities=29% Similarity=0.548 Sum_probs=18.8
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
|+++|++|+|||||++.|.|.
T Consensus 3 V~liG~~n~GKSsLi~~L~~~ 23 (171)
T d1mkya1 3 VLIVGRPNVGKSTLFNKLVKK 23 (171)
T ss_dssp EEEECCTTSSHHHHHHHHHC-
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 679999999999999999874
No 256
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=94.40 E-value=0.0051 Score=61.47 Aligned_cols=51 Identities=18% Similarity=0.259 Sum_probs=36.1
Q ss_pred HhcCCeEEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCCcc
Q psy11254 580 RNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPA 645 (741)
Q Consensus 580 ~~~~p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld~a 645 (741)
....+.+++|||+|. +.++...+.+..+|.++.. +.=||+|||.|..+|.+
T Consensus 238 ~~~~~~~~~iDEpe~----------~Lhp~~~~~l~~~l~~~~~-----~~QviitTHsp~~~~~~ 288 (308)
T d1e69a_ 238 EIKPSPFYVLDEVDS----------PLDDYNAERFKRLLKENSK-----HTQFIVITHNKIVMEAA 288 (308)
T ss_dssp TTSCCSEEEEESCCS----------SCCHHHHHHHHHHHHHHTT-----TSEEEEECCCTTGGGGC
T ss_pred hhccCchhhhhhccc----------cCCHHHHHHHHHHHHHhcc-----CCEEEEEECCHHHHHhc
Confidence 345678999999987 2455666777777776632 23478999999888643
No 257
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=94.39 E-value=0.0079 Score=53.69 Aligned_cols=21 Identities=33% Similarity=0.596 Sum_probs=19.4
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++|+|+||+|||||++++.+.
T Consensus 4 I~lvG~~nvGKSsLin~l~~~ 24 (161)
T d2gj8a1 4 VVIAGRPNAGKSSLLNALAGR 24 (161)
T ss_dssp EEEEESTTSSHHHHHHHHHTS
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 689999999999999999875
No 258
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.37 E-value=0.075 Score=49.23 Aligned_cols=23 Identities=30% Similarity=0.398 Sum_probs=20.3
Q ss_pred CceEEEcCCCCChHHHHHHHHHH
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
+.|+|.|+||+|||+|+..+.+.
T Consensus 1 k~V~ivG~~~~GKTsLl~~l~~~ 23 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTLLFVRLLTG 23 (207)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHHcC
Confidence 46899999999999999998763
No 259
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=94.32 E-value=0.0077 Score=55.87 Aligned_cols=21 Identities=19% Similarity=0.338 Sum_probs=19.6
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++|+|+||+|||||+++|.|.
T Consensus 26 I~lvG~~n~GKSTLin~L~g~ 46 (195)
T d1svia_ 26 IALAGRSNVGKSSFINSLINR 46 (195)
T ss_dssp EEEEEBTTSSHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHhcCC
Confidence 889999999999999999874
No 260
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.31 E-value=0.0086 Score=56.07 Aligned_cols=23 Identities=30% Similarity=0.398 Sum_probs=20.3
Q ss_pred CCceEEcCCCChHHHHHHHHHHh
Q psy11254 206 KGCLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 206 ~GvlL~Gp~GtGKTtL~r~ia~~ 228 (741)
+.|+|+|+||+|||||++.+.+.
T Consensus 1 k~V~ivG~~~~GKTsLl~~l~~~ 23 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTLLFVRLLTG 23 (207)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHHcC
Confidence 35789999999999999999874
No 261
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=94.28 E-value=0.044 Score=48.09 Aligned_cols=23 Identities=22% Similarity=0.208 Sum_probs=20.1
Q ss_pred ceEEEcCCCCChHHHHHHHHHHh
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
+++++|+||+|||||+..+.+.-
T Consensus 2 kivlvG~~~vGKSsLi~~l~~~~ 24 (160)
T d1r8sa_ 2 RILMVGLDAAGKTTILYKLKLGE 24 (160)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHhcCC
Confidence 58999999999999999987543
No 262
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=94.26 E-value=0.0071 Score=54.34 Aligned_cols=21 Identities=24% Similarity=0.425 Sum_probs=19.2
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++++|++|||||||++.+.+.
T Consensus 5 i~ivG~~~~GKTsLi~~l~~~ 25 (165)
T d1ksha_ 5 LLMLGLDNAGKTTILKKFNGE 25 (165)
T ss_dssp EEEECSTTSSHHHHHHHHTTC
T ss_pred EEEECCCCCCHHHHHHHHcCC
Confidence 789999999999999999764
No 263
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=94.26 E-value=0.011 Score=54.51 Aligned_cols=24 Identities=21% Similarity=0.234 Sum_probs=20.0
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCC
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDAN 232 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~ 232 (741)
++++|++||||||+++.+. ..+..
T Consensus 6 IgitG~~gSGKstva~~l~-~~g~~ 29 (191)
T d1uf9a_ 6 IGITGNIGSGKSTVAALLR-SWGYP 29 (191)
T ss_dssp EEEEECTTSCHHHHHHHHH-HTTCC
T ss_pred EEEECCCCCCHHHHHHHHH-HCCCe
Confidence 6799999999999999995 45544
No 264
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=94.25 E-value=0.02 Score=49.19 Aligned_cols=15 Identities=40% Similarity=0.370 Sum_probs=13.2
Q ss_pred ceEEcCCCChHHHHH
Q psy11254 208 CLLYGPPGTGKTLLA 222 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~ 222 (741)
++|++|+|+|||..+
T Consensus 10 ~il~~~tGsGKT~~~ 24 (140)
T d1yksa1 10 TVLDFHPGAGKTRRF 24 (140)
T ss_dssp EEECCCTTSSTTTTH
T ss_pred EEEEcCCCCChhHHH
Confidence 789999999999665
No 265
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=94.24 E-value=0.014 Score=58.89 Aligned_cols=95 Identities=19% Similarity=0.230 Sum_probs=48.2
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCC---CceeeecccccchhhHHHHHhhhhhhhcccccccccccCCCccchhhhhcchH
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDA---NFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGES 284 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~ 284 (741)
+.+.||||+|||||+..++..+.. ...-+... .....+-..+.++. .|...+....+ ....+.......|+.
T Consensus 54 igitG~pGaGKSTli~~l~~~~~~~g~~vaViavD--pss~~~gg~llgdr--~rm~~~~~~~~-~~ir~~~~~~~~gg~ 128 (323)
T d2qm8a1 54 VGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVD--PSSTRTGGSILGDK--TRMARLAIDRN-AFIRPSPSSGTLGGV 128 (323)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEEC--GGGGSSCCCSSCCG--GGSTTGGGCTT-EEEECCCCCSSHHHH
T ss_pred EeeeCCCCCCHHHHHHHHHHHHhhcCCceeeeecc--cccHHHHhccccch--hhHHHHhcccc-eeeccccccccccch
Confidence 789999999999999999976522 21111110 00000000001111 11111110000 001122234456777
Q ss_pred HHHHHHHHHHHHhcCCeEEEecc
Q psy11254 285 ARLIREMFNYARNHQPCIIFMDE 307 (741)
Q Consensus 285 ~~~v~~~~~~A~~~~P~ILllDE 307 (741)
...+++.+.......-+++|+.=
T Consensus 129 ~~~~~~~i~~~~~~g~d~iiiET 151 (323)
T d2qm8a1 129 AAKTRETMLLCEAAGFDVILVET 151 (323)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEE
T ss_pred hHHHHHHHHhhccCCCCeEEEee
Confidence 77787777777777778888876
No 266
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=94.23 E-value=0.0075 Score=57.34 Aligned_cols=30 Identities=27% Similarity=0.366 Sum_probs=22.4
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCceeee
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANFLKVV 237 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~ 237 (741)
.+|+|++|+|||||+++|.+......+.++
T Consensus 98 ~~~~G~SGVGKSTLiN~L~~~~~~~T~~vs 127 (225)
T d1u0la2 98 STMAGLSGVGKSSLLNAINPGLKLRVSEVS 127 (225)
T ss_dssp EEEECSTTSSHHHHHHHHSTTCCCC-----
T ss_pred EEEECCCCCCHHHHHHhhcchhhhhccCcc
Confidence 679999999999999999987766555554
No 267
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.23 E-value=0.0095 Score=57.27 Aligned_cols=26 Identities=23% Similarity=0.194 Sum_probs=21.7
Q ss_pred CCCC--ceEEcCCCChHHHHHHHHHHhc
Q psy11254 204 PPKG--CLLYGPPGTGKTLLARAVASQL 229 (741)
Q Consensus 204 ~~~G--vlL~Gp~GtGKTtL~r~ia~~l 229 (741)
+|+| ++++||||||||+++..++...
T Consensus 34 ip~G~~~~i~G~~GsGKT~lalq~~~~~ 61 (258)
T d1v5wa_ 34 IESMAITEAFGEFRTGKTQLSHTLCVTA 61 (258)
T ss_dssp BCSSEEEEEECCTTCTHHHHHHHHHHHT
T ss_pred CcCCEEEEEECCCCCCHHHHHHHHHHHH
Confidence 4555 8899999999999999888643
No 268
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=94.21 E-value=0.012 Score=53.00 Aligned_cols=23 Identities=22% Similarity=0.143 Sum_probs=20.5
Q ss_pred eEEEcCCCCChHHHHHHHHHHhC
Q psy11254 527 CLLYGPPGTGKTLLARAVASQLD 549 (741)
Q Consensus 527 ~ll~G~~G~GKt~l~~~~a~~~~ 549 (741)
+.++|++|||||||+..++..+.
T Consensus 4 i~I~G~~gSGKTTli~~l~~~L~ 26 (165)
T d1xjca_ 4 WQVVGYKHSGKTTLMEKWVAAAV 26 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHH
Confidence 46899999999999999998874
No 269
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.15 E-value=0.01 Score=55.91 Aligned_cols=27 Identities=30% Similarity=0.416 Sum_probs=22.3
Q ss_pred CC--ceEEcCCCChHHHHHHHHHHhcCCC
Q psy11254 206 KG--CLLYGPPGTGKTLLARAVASQLDAN 232 (741)
Q Consensus 206 ~G--vlL~Gp~GtGKTtL~r~ia~~l~~~ 232 (741)
+| +.|.|+.|+||||+++.|+..+...
T Consensus 2 rG~lI~ieG~dGsGKsT~~~~L~~~L~~~ 30 (209)
T d1nn5a_ 2 RGALIVLEGVDRAGKSTQSRKLVEALCAA 30 (209)
T ss_dssp CCCEEEEEESTTSSHHHHHHHHHHHHHHT
T ss_pred CeeEEEEECCCCCCHHHHHHHHHHHHHHC
Confidence 57 4466999999999999999987543
No 270
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=94.13 E-value=0.011 Score=54.78 Aligned_cols=35 Identities=17% Similarity=0.377 Sum_probs=28.5
Q ss_pred CCCCCCceEEEcCCCCChHHHHHHHHHHhCccEEE
Q psy11254 520 GITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 554 (741)
Q Consensus 520 ~~~~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~ 554 (741)
|.+....++|+|||+||||+++.+|++.++...++
T Consensus 49 ~~PKkn~i~~~GP~~TGKS~f~~sl~~~l~G~vis 83 (205)
T d1tuea_ 49 GTPKKNCLVFCGPANTGKSYFGMSFIHFIQGAVIS 83 (205)
T ss_dssp TCTTCSEEEEESCGGGCHHHHHHHHHHHHTCEECC
T ss_pred CCCCceEEEEECCCCccHHHHHHHHHHHhCCEEEe
Confidence 45555679999999999999999999998755433
No 271
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.95 E-value=0.094 Score=51.41 Aligned_cols=78 Identities=15% Similarity=0.183 Sum_probs=44.7
Q ss_pred CceEEEcCCCCChHHHHHHHHHHh------CccEEEEechhhhccccchHHHHHHHHHHHHHhcCCeEEEEcccccccCC
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQL------DANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGR 598 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~------~~~~~~v~~~~l~~~~~g~s~~~i~~~f~~a~~~~p~Vl~iDE~d~~~~~ 598 (741)
-=|.|.|++||||||++..|...+ ...+..++..++. ....++ ..+...... .-++..
T Consensus 28 ~iIGi~G~qGSGKSTl~~~l~~~L~~~~~~~~~v~~iS~DdfY---~t~~~r---~~L~~~~~~----------~pl~~~ 91 (286)
T d1odfa_ 28 LFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFY---LTHEDQ---LKLNEQFKN----------NKLLQG 91 (286)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGGB---CCHHHH---HHHHHHTTT----------CGGGSS
T ss_pred EEEEeECCCCCCHHHHHHHHHHHHHHHhCCCcceEeeccCCCC---CCHHHH---HHHhhhccc----------ccccee
Confidence 346789999999999998887665 2345566766663 222221 122221111 235667
Q ss_pred CCCCCCcccHHHHHHHHHHH
Q psy11254 599 RFSEGTSADREIQRTLMELL 618 (741)
Q Consensus 599 r~~~~~~~~~~~~~~l~~lL 618 (741)
|+.++++.-.-..+.+..|.
T Consensus 92 RG~PgThD~~ll~~~l~~l~ 111 (286)
T d1odfa_ 92 RGLPGTHDMKLLQEVLNTIF 111 (286)
T ss_dssp SCSTTSBCHHHHHHHHHHHT
T ss_pred cCCCcchhHHHHHHHHHHHH
Confidence 88787765444444444443
No 272
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=93.94 E-value=0.01 Score=53.64 Aligned_cols=21 Identities=19% Similarity=0.322 Sum_probs=19.4
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++++|.||||||||++.+.+.
T Consensus 18 I~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 18 VIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp EEEEESTTSSHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 889999999999999999874
No 273
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.90 E-value=0.014 Score=55.92 Aligned_cols=28 Identities=29% Similarity=0.315 Sum_probs=24.8
Q ss_pred CCCCCCceEEEcCCCCChHHHHHHHHHH
Q psy11254 520 GITPPKGCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 520 ~~~~~~~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
|++++.-++++||||||||+++..++..
T Consensus 33 Gip~G~~~~i~G~~GsGKT~lalq~~~~ 60 (258)
T d1v5wa_ 33 GIESMAITEAFGEFRTGKTQLSHTLCVT 60 (258)
T ss_dssp SBCSSEEEEEECCTTCTHHHHHHHHHHH
T ss_pred CCcCCEEEEEECCCCCCHHHHHHHHHHH
Confidence 5788888999999999999999988854
No 274
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=93.88 E-value=0.018 Score=51.32 Aligned_cols=28 Identities=32% Similarity=0.475 Sum_probs=24.4
Q ss_pred CCC--ceEEcCCCChHHHHHHHHHHhcCCC
Q psy11254 205 PKG--CLLYGPPGTGKTLLARAVASQLDAN 232 (741)
Q Consensus 205 ~~G--vlL~Gp~GtGKTtL~r~ia~~l~~~ 232 (741)
.+| ++|.|+=|+||||++|.++..++..
T Consensus 31 ~~g~ii~L~G~LGaGKTtfvr~~~~~lg~~ 60 (158)
T d1htwa_ 31 EKAIMVYLNGDLGAGKTTLTRGMLQGIGHQ 60 (158)
T ss_dssp SSCEEEEEECSTTSSHHHHHHHHHHHTTCC
T ss_pred CCCeEEEEecCCCccHHHHHHHHHhhcccc
Confidence 356 7799999999999999999998764
No 275
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=93.81 E-value=0.019 Score=52.90 Aligned_cols=27 Identities=22% Similarity=0.208 Sum_probs=22.3
Q ss_pred ceEEEcCCCCChHHHHHHHHHHhCccEE
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQLDANFL 553 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~~~~~~ 553 (741)
-+.++|++||||||+|+.+ ...+.+++
T Consensus 5 IIgitG~~gSGKstva~~l-~~~g~~~~ 31 (191)
T d1uf9a_ 5 IIGITGNIGSGKSTVAALL-RSWGYPVL 31 (191)
T ss_dssp EEEEEECTTSCHHHHHHHH-HHTTCCEE
T ss_pred EEEEECCCCCCHHHHHHHH-HHCCCeEE
Confidence 3678999999999999998 45776654
No 276
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=93.75 E-value=0.014 Score=54.79 Aligned_cols=24 Identities=29% Similarity=0.440 Sum_probs=21.0
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCC
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDA 231 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~ 231 (741)
+.+-|+.||||||+++.|+..+..
T Consensus 5 IviEG~dGsGKsT~~~~L~~~L~~ 28 (210)
T d4tmka_ 5 IVIEGLEGAGKTTARNVVVETLEQ 28 (210)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHh
Confidence 668899999999999999987743
No 277
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=93.74 E-value=0.026 Score=56.21 Aligned_cols=23 Identities=26% Similarity=0.358 Sum_probs=21.6
Q ss_pred ceEEcCCCChHHHHHHHHHHhcC
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLD 230 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~ 230 (741)
+++.|++||||||+++.|+..+.
T Consensus 83 IGIaG~sgSGKSTla~~L~~lL~ 105 (308)
T d1sq5a_ 83 ISIAGSVAVGKSTTARVLQALLS 105 (308)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHT
T ss_pred EEEeCCCCCCCcHHHHHHHHHHh
Confidence 78999999999999999999885
No 278
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=93.66 E-value=0.012 Score=56.41 Aligned_cols=29 Identities=34% Similarity=0.481 Sum_probs=24.5
Q ss_pred CCCCCCceEEEcCCCCChHHHHHHHHHHh
Q psy11254 520 GITPPKGCLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 520 ~~~~~~~~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
|++.+.-++++||||||||+++-.++...
T Consensus 32 Glp~G~~~li~G~pGsGKT~~~lq~~~~~ 60 (254)
T d1pzna2 32 GIETQAITEVFGEFGSGKTQLAHTLAVMV 60 (254)
T ss_dssp SEESSEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred CccCCEEEEEEcCCCCCHHHHHHHHHHHh
Confidence 57777889999999999999988777544
No 279
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.66 E-value=0.014 Score=52.87 Aligned_cols=21 Identities=24% Similarity=0.475 Sum_probs=18.8
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++++|++|||||||++.+.+.
T Consensus 6 ivvvG~~~vGKTsli~r~~~~ 26 (173)
T d2a5ja1 6 YIIIGDTGVGKSCLLLQFTDK 26 (173)
T ss_dssp EEEESSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHhcC
Confidence 679999999999999988764
No 280
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.63 E-value=0.18 Score=45.51 Aligned_cols=21 Identities=29% Similarity=0.358 Sum_probs=19.1
Q ss_pred ceEEEcCCCCChHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVAS 546 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~ 546 (741)
++++.|++|+|||+|++.+.+
T Consensus 7 Ki~ivG~~~vGKTsLi~~l~~ 27 (186)
T d2f7sa1 7 KLLALGDSGVGKTTFLYRYTD 27 (186)
T ss_dssp EEEEESCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHhc
Confidence 489999999999999998875
No 281
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=93.62 E-value=0.015 Score=52.21 Aligned_cols=21 Identities=33% Similarity=0.349 Sum_probs=18.8
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++|+|++|+|||||++.+.+.
T Consensus 5 i~i~G~~~~GKTsLl~~l~~~ 25 (164)
T d1zd9a1 5 LTLVGLQYSGKTTFVNVIASG 25 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHcC
Confidence 679999999999999988764
No 282
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=93.58 E-value=0.049 Score=49.47 Aligned_cols=21 Identities=24% Similarity=0.387 Sum_probs=19.3
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
+.++|+|++|||||+++|.+.
T Consensus 8 IaiiG~~naGKSTL~n~L~~~ 28 (179)
T d1wb1a4 8 LGIFGHIDHGKTTLSKVLTEI 28 (179)
T ss_dssp EEEEECTTSSHHHHHHHHHTT
T ss_pred EEEEeCCCCcHHHHHHHHHHh
Confidence 789999999999999999864
No 283
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=93.55 E-value=0.056 Score=54.34 Aligned_cols=25 Identities=28% Similarity=0.371 Sum_probs=21.7
Q ss_pred CCceEEEcCCCCChHHHHHHHHHHh
Q psy11254 524 PKGCLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 524 ~~~~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
...|.++||||+|||||...++..+
T Consensus 54 ~~~IgitG~pGaGKSTLi~~l~~~~ 78 (327)
T d2p67a1 54 TLRLGVTGTPGAGKSTFLEAFGMLL 78 (327)
T ss_dssp SEEEEEEECTTSCHHHHHHHHHHHH
T ss_pred ceEEEeeCCCCCCHHHHHHHHHHHH
Confidence 3468999999999999999998765
No 284
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=93.54 E-value=0.0074 Score=55.41 Aligned_cols=21 Identities=38% Similarity=0.453 Sum_probs=19.0
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
|+|+|+||+|||||+++|.+.
T Consensus 4 VaiiG~~nvGKSSLin~L~~~ 24 (185)
T d1lnza2 4 VGLVGFPSVGKSTLLSVVSSA 24 (185)
T ss_dssp EEEESSTTSSHHHHHHHSEEE
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 689999999999999999764
No 285
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=93.54 E-value=0.015 Score=53.81 Aligned_cols=27 Identities=26% Similarity=0.534 Sum_probs=23.2
Q ss_pred CCCC-ceEEcCCCChHHHHHHHHHHhcC
Q psy11254 204 PPKG-CLLYGPPGTGKTLLARAVASQLD 230 (741)
Q Consensus 204 ~~~G-vlL~Gp~GtGKTtL~r~ia~~l~ 230 (741)
+.+. ++|+|||+||||+++.+|++.++
T Consensus 51 PKkn~i~~~GP~~TGKS~f~~sl~~~l~ 78 (205)
T d1tuea_ 51 PKKNCLVFCGPANTGKSYFGMSFIHFIQ 78 (205)
T ss_dssp TTCSEEEEESCGGGCHHHHHHHHHHHHT
T ss_pred CCceEEEEECCCCccHHHHHHHHHHHhC
Confidence 3444 78999999999999999999875
No 286
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=93.54 E-value=0.0096 Score=55.16 Aligned_cols=24 Identities=25% Similarity=0.320 Sum_probs=21.6
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCC
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDA 231 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~ 231 (741)
|++-|+.||||||+++.|+..++.
T Consensus 12 I~ieG~~GsGKTTl~~~L~~~l~~ 35 (197)
T d2vp4a1 12 VLIEGNIGSGKTTYLNHFEKYKND 35 (197)
T ss_dssp EEEECSTTSCHHHHHHTTGGGTTT
T ss_pred EEEECCCCCCHHHHHHHHHHHhCC
Confidence 779999999999999999988753
No 287
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=93.48 E-value=0.079 Score=51.23 Aligned_cols=23 Identities=22% Similarity=0.380 Sum_probs=20.7
Q ss_pred CceEEEcCCCCChHHHHHHHHHH
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
-+++|+|.||+||||++.+|.+.
T Consensus 33 l~I~LvG~tg~GKSSliN~ilg~ 55 (257)
T d1h65a_ 33 LTILVMGKGGVGKSSTVNSIIGE 55 (257)
T ss_dssp EEEEEEESTTSSHHHHHHHHHTS
T ss_pred cEEEEECCCCCcHHHHHHHHhCC
Confidence 46899999999999999999865
No 288
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.43 E-value=0.016 Score=51.85 Aligned_cols=20 Identities=15% Similarity=0.298 Sum_probs=18.2
Q ss_pred ceEEcCCCChHHHHHHHHHH
Q psy11254 208 CLLYGPPGTGKTLLARAVAS 227 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~ 227 (741)
++|+|+||+|||||++.+.+
T Consensus 5 v~liG~~~vGKSsLi~rl~~ 24 (164)
T d1z2aa1 5 MVVVGNGAVGKSSMIQRYCK 24 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 67999999999999998775
No 289
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.40 E-value=0.027 Score=53.06 Aligned_cols=31 Identities=29% Similarity=0.365 Sum_probs=25.7
Q ss_pred CC--ceEEcCCCChHHHHHHHHHHhcCCCceee
Q psy11254 206 KG--CLLYGPPGTGKTLLARAVASQLDANFLKV 236 (741)
Q Consensus 206 ~G--vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v 236 (741)
+| +.+-|+-||||||+++.|+..+......+
T Consensus 2 kGk~I~iEG~DGsGKST~~~~L~~~L~~~~~~~ 34 (214)
T d1tmka_ 2 RGKLILIEGLDRTGKTTQCNILYKKLQPNCKLL 34 (214)
T ss_dssp CCCEEEEEESTTSSHHHHHHHHHHHTTTSEEEE
T ss_pred CeEEEEEECCCCCcHHHHHHHHHHHHHhCCEEE
Confidence 56 67999999999999999999987654433
No 290
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=93.36 E-value=0.022 Score=51.39 Aligned_cols=20 Identities=45% Similarity=0.571 Sum_probs=18.5
Q ss_pred ceEEcCCCChHHHHHHHHHH
Q psy11254 208 CLLYGPPGTGKTLLARAVAS 227 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~ 227 (741)
++++|++|+|||||++.+.+
T Consensus 19 I~vvG~~~vGKSsLi~~l~~ 38 (176)
T d1fzqa_ 19 ILLLGLDNAGKTTLLKQLAS 38 (176)
T ss_dssp EEEEESTTSSHHHHHHHHCC
T ss_pred EEEECCCCCCHHHHHHHHhc
Confidence 89999999999999998865
No 291
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=93.36 E-value=0.017 Score=52.07 Aligned_cols=21 Identities=29% Similarity=0.341 Sum_probs=19.0
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++++|++|||||||++.+.+.
T Consensus 8 i~vvG~~~vGKTsLi~~l~~~ 28 (169)
T d3raba_ 8 ILIIGNSSVGKTSFLFRYADD 28 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHcC
Confidence 689999999999999988764
No 292
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.36 E-value=0.041 Score=49.38 Aligned_cols=23 Identities=43% Similarity=0.654 Sum_probs=19.5
Q ss_pred ceEEEcCCCCChHHHHHHHHHHh
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
++++.|++|+|||+|+..+.+..
T Consensus 3 Ki~lvG~~~vGKTsLi~~~~~~~ 25 (168)
T d2gjsa1 3 KVLLLGAPGVGKSALARIFGGVE 25 (168)
T ss_dssp EEEEECCTTSSHHHHHHHHHTC-
T ss_pred EEEEECCCCcCHHHHHHHHhCCc
Confidence 47999999999999999887643
No 293
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.29 E-value=0.018 Score=52.31 Aligned_cols=21 Identities=29% Similarity=0.469 Sum_probs=18.8
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++++|++|||||||++.+.+.
T Consensus 7 i~vvG~~~vGKTsLi~~~~~~ 27 (175)
T d2f9la1 7 VVLIGDSGVGKSNLLSRFTRN 27 (175)
T ss_dssp EEEESSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 689999999999999988763
No 294
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.25 E-value=0.018 Score=52.08 Aligned_cols=21 Identities=29% Similarity=0.521 Sum_probs=18.8
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++++|++|+|||||++.+.+.
T Consensus 5 i~~vG~~~vGKSsLi~~~~~~ 25 (175)
T d1ky3a_ 5 VIILGDSGVGKTSLMHRYVND 25 (175)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHcC
Confidence 679999999999999998763
No 295
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=93.25 E-value=0.016 Score=52.68 Aligned_cols=21 Identities=24% Similarity=0.427 Sum_probs=19.7
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
|+|+|.+|+|||||++.+.|.
T Consensus 8 I~lvG~~~~GKSSLin~l~~~ 28 (178)
T d1wf3a1 8 VAIVGKPNVGKSTLLNNLLGV 28 (178)
T ss_dssp EEEECSTTSSHHHHHHHHHTS
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 789999999999999999875
No 296
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.21 E-value=0.029 Score=51.28 Aligned_cols=27 Identities=19% Similarity=0.380 Sum_probs=22.7
Q ss_pred CceEEEcCCCCChHHHHHHHHHHhCcc
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQLDAN 551 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~~~~ 551 (741)
+-++|.||+|+||||+++.+.+.....
T Consensus 4 k~ivl~Gpsg~GK~tl~~~L~~~~~~~ 30 (178)
T d1kgda_ 4 KTLVLLGAHGVGRRHIKNTLITKHPDR 30 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHCTTT
T ss_pred CcEEEECCCCCCHHHHHHHHHHhCCcC
Confidence 458999999999999999999776433
No 297
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=93.20 E-value=0.0065 Score=57.98 Aligned_cols=30 Identities=23% Similarity=0.410 Sum_probs=19.0
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCceeee
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANFLKVV 237 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~ 237 (741)
.+|+|++|+|||||+++|.+......+.++
T Consensus 100 ~vl~G~SGVGKSSLiN~L~~~~~~~t~~vs 129 (231)
T d1t9ha2 100 TVFAGQSGVGKSSLLNAISPELGLRTNEIS 129 (231)
T ss_dssp EEEEESHHHHHHHHHHHHCC----------
T ss_pred EEEECCCCccHHHHHHhhccHhHhhhcccc
Confidence 679999999999999999987766555554
No 298
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.17 E-value=0.06 Score=48.01 Aligned_cols=22 Identities=23% Similarity=0.392 Sum_probs=19.7
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
++++.|++|+|||+|+..+.+.
T Consensus 5 Ki~viG~~~vGKTsli~~l~~~ 26 (166)
T d1ctqa_ 5 KLVVVGAGGVGKSALTIQLIQN 26 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 5899999999999999988764
No 299
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=93.14 E-value=0.15 Score=49.28 Aligned_cols=27 Identities=33% Similarity=0.463 Sum_probs=21.7
Q ss_pred CCCCCceEEEcCCCCChHHHHHHHHHH
Q psy11254 521 ITPPKGCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 521 ~~~~~~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
+.++.-.+|+|+||+|||+++-.+|..
T Consensus 26 ~~pg~~~~i~G~~G~GKS~l~l~la~~ 52 (274)
T d1nlfa_ 26 MVAGTVGALVSPGGAGKSMLALQLAAQ 52 (274)
T ss_dssp EETTSEEEEEESTTSSHHHHHHHHHHH
T ss_pred ccCCcEEEEEeCCCCCHHHHHHHHHHH
Confidence 344666889999999999998877754
No 300
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.13 E-value=0.019 Score=51.49 Aligned_cols=21 Identities=24% Similarity=0.458 Sum_probs=19.0
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++|+|++|+|||||++.+.+.
T Consensus 6 i~lvG~~~vGKTsLi~r~~~~ 26 (167)
T d1kaoa_ 6 VVVLGSGGVGKSALTVQFVTG 26 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 689999999999999988864
No 301
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=93.11 E-value=0.017 Score=52.26 Aligned_cols=21 Identities=29% Similarity=0.469 Sum_probs=19.4
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
|+|+|.||+|||||+++|.|.
T Consensus 8 I~iiG~~nvGKSSLin~L~~~ 28 (179)
T d1egaa1 8 IAIVGRPNVGKSTLLNKLLGQ 28 (179)
T ss_dssp EEEECSSSSSHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 779999999999999999874
No 302
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=93.10 E-value=0.023 Score=53.16 Aligned_cols=25 Identities=32% Similarity=0.407 Sum_probs=20.6
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCc
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANF 233 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~ 233 (741)
++|+|++||||||+++.+. ..|...
T Consensus 5 IgITG~igSGKStv~~~l~-~~G~~v 29 (205)
T d1jjva_ 5 VGLTGGIGSGKTTIANLFT-DLGVPL 29 (205)
T ss_dssp EEEECSTTSCHHHHHHHHH-TTTCCE
T ss_pred EEEECCCCCCHHHHHHHHH-HCCCeE
Confidence 5699999999999999886 456544
No 303
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=93.09 E-value=0.031 Score=50.82 Aligned_cols=30 Identities=23% Similarity=0.398 Sum_probs=24.1
Q ss_pred CCceEEEcCCCCChHHHHHHHHHHhCccEEE
Q psy11254 524 PKGCLLYGPPGTGKTLLARAVASQLDANFLK 554 (741)
Q Consensus 524 ~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~ 554 (741)
+.+++|.|++|+|||++|-.+... +..++.
T Consensus 14 g~gvl~~G~sG~GKStlal~l~~~-g~~lv~ 43 (176)
T d1kkma_ 14 GLGVLITGDSGVGKSETALELVQR-GHRLIA 43 (176)
T ss_dssp TEEEEEECCTTSCHHHHHHHHHHT-TCEEEE
T ss_pred CEEEEEEeCCCCCHHHHHHHHHHc-CCeEEe
Confidence 578999999999999999887764 555443
No 304
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.06 E-value=0.02 Score=51.65 Aligned_cols=21 Identities=38% Similarity=0.564 Sum_probs=19.1
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++|+|++|+|||||++.+.+.
T Consensus 8 i~lvG~~~vGKTsLi~~l~~~ 28 (171)
T d2ew1a1 8 IVLIGNAGVGKTCLVRRFTQG 28 (171)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 679999999999999998863
No 305
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=93.04 E-value=0.14 Score=45.58 Aligned_cols=22 Identities=27% Similarity=0.507 Sum_probs=19.2
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
.|+++|++|+|||||++++.+.
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~~ 23 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVKK 23 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC-
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4789999999999999999754
No 306
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.98 E-value=0.021 Score=51.54 Aligned_cols=20 Identities=25% Similarity=0.378 Sum_probs=18.5
Q ss_pred ceEEcCCCChHHHHHHHHHH
Q psy11254 208 CLLYGPPGTGKTLLARAVAS 227 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~ 227 (741)
++|+|.+|||||||++.+.+
T Consensus 8 i~lvG~~~vGKTsLi~r~~~ 27 (171)
T d2erya1 8 LVVVGGGGVGKSALTIQFIQ 27 (171)
T ss_dssp EEEEECTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHh
Confidence 78999999999999998876
No 307
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.98 E-value=0.021 Score=51.20 Aligned_cols=21 Identities=24% Similarity=0.475 Sum_probs=18.8
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++|+|++|+|||||++.+.+.
T Consensus 7 ivlvG~~~vGKTsli~~~~~~ 27 (166)
T d1z0fa1 7 YIIIGDMGVGKSCLLHQFTEK 27 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 679999999999999988764
No 308
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.95 E-value=0.018 Score=52.79 Aligned_cols=20 Identities=30% Similarity=0.394 Sum_probs=18.3
Q ss_pred ceEEcCCCChHHHHHHHHHH
Q psy11254 208 CLLYGPPGTGKTLLARAVAS 227 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~ 227 (741)
++++|++|||||||++.+.+
T Consensus 8 i~ivG~~~vGKTsLi~~l~~ 27 (186)
T d2f7sa1 8 LLALGDSGVGKTTFLYRYTD 27 (186)
T ss_dssp EEEESCTTSSHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHhc
Confidence 67999999999999998875
No 309
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=92.93 E-value=0.065 Score=48.01 Aligned_cols=24 Identities=17% Similarity=0.268 Sum_probs=21.0
Q ss_pred CCceEEEcCCCCChHHHHHHHHHH
Q psy11254 524 PKGCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 524 ~~~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
.-+++++|.||+|||||+..+.+.
T Consensus 15 ~~kI~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 15 EHKVIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHTT
T ss_pred eEEEEEECCCCCCHHHHHHHHhcC
Confidence 346999999999999999998764
No 310
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=92.92 E-value=0.0079 Score=53.62 Aligned_cols=22 Identities=23% Similarity=0.430 Sum_probs=20.0
Q ss_pred ceEEcCCCChHHHHHHHHHHhc
Q psy11254 208 CLLYGPPGTGKTLLARAVASQL 229 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l 229 (741)
++|+|+||+|||||+++|.|.-
T Consensus 3 I~liG~~n~GKSSLin~l~g~~ 24 (160)
T d1xzpa2 3 MVIVGKPNVGKSTLLNRLLNED 24 (160)
T ss_dssp EEEECCHHHHTCHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 5799999999999999999863
No 311
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.87 E-value=0.022 Score=51.01 Aligned_cols=21 Identities=33% Similarity=0.483 Sum_probs=18.9
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++++|++|+|||||++.+.+.
T Consensus 5 i~vvG~~~vGKTSli~~l~~~ 25 (166)
T d1g16a_ 5 ILLIGDSGVGKSCLLVRFVED 25 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 679999999999999988764
No 312
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=92.84 E-value=0.02 Score=52.25 Aligned_cols=21 Identities=29% Similarity=0.523 Sum_probs=19.5
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
|+++|.+|+|||||++++.+.
T Consensus 11 V~iiG~~~~GKSTLin~l~~~ 31 (186)
T d1mkya2 11 VAIVGRPNVGKSTLFNAILNK 31 (186)
T ss_dssp EEEECSTTSSHHHHHHHHHTS
T ss_pred EEEECCCCCCHHHHHHHHHCC
Confidence 789999999999999999874
No 313
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=92.78 E-value=0.012 Score=53.76 Aligned_cols=21 Identities=33% Similarity=0.417 Sum_probs=19.3
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
|+|+|+||+|||||+++|.|.
T Consensus 4 VaivG~~nvGKSTLin~L~~~ 24 (180)
T d1udxa2 4 VGLVGYPNAGKSSLLAAMTRA 24 (180)
T ss_dssp EEEECCGGGCHHHHHHHHCSS
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 789999999999999999764
No 314
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=92.76 E-value=0.02 Score=52.06 Aligned_cols=23 Identities=30% Similarity=0.484 Sum_probs=20.1
Q ss_pred CCceEEcCCCChHHHHHHHHHHh
Q psy11254 206 KGCLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 206 ~GvlL~Gp~GtGKTtL~r~ia~~ 228 (741)
+|++|.|++|+||||++-.+...
T Consensus 15 ~gvl~~G~sG~GKStlal~l~~~ 37 (176)
T d1kkma_ 15 LGVLITGDSGVGKSETALELVQR 37 (176)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHT
T ss_pred EEEEEEeCCCCCHHHHHHHHHHc
Confidence 56999999999999999887754
No 315
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.70 E-value=0.024 Score=50.98 Aligned_cols=21 Identities=24% Similarity=0.498 Sum_probs=19.0
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++|+|++|||||+|++.+.+.
T Consensus 5 i~lvG~~~vGKTsli~r~~~~ 25 (168)
T d2atva1 5 LAIFGRAGVGKSALVVRFLTK 25 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 689999999999999988864
No 316
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=92.67 E-value=0.022 Score=52.96 Aligned_cols=24 Identities=25% Similarity=0.400 Sum_probs=20.9
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCC
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDA 231 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~ 231 (741)
|.+-|+.||||||+++.|+..+..
T Consensus 3 I~ieG~dGsGKST~~~~L~~~l~~ 26 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLVEKLSGAFRA 26 (208)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHH
Confidence 458899999999999999988754
No 317
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=92.66 E-value=0.027 Score=52.84 Aligned_cols=24 Identities=42% Similarity=0.540 Sum_probs=20.0
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCC
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDAN 232 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~ 232 (741)
++|+|++||||||+++.+. ..|..
T Consensus 6 IgitG~igSGKStv~~~l~-~~G~~ 29 (208)
T d1vhta_ 6 VALTGGIGSGKSTVANAFA-DLGIN 29 (208)
T ss_dssp EEEECCTTSCHHHHHHHHH-HTTCE
T ss_pred EEEECCCcCCHHHHHHHHH-HCCCc
Confidence 5799999999999999886 55543
No 318
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=92.64 E-value=0.049 Score=48.44 Aligned_cols=31 Identities=26% Similarity=0.324 Sum_probs=26.7
Q ss_pred CCCCCceEEEcCCCCChHHHHHHHHHHhCcc
Q psy11254 521 ITPPKGCLLYGPPGTGKTLLARAVASQLDAN 551 (741)
Q Consensus 521 ~~~~~~~ll~G~~G~GKt~l~~~~a~~~~~~ 551 (741)
..++.-++|.|+=|+||||+++.+++.++..
T Consensus 30 ~~~g~ii~L~G~LGaGKTtfvr~~~~~lg~~ 60 (158)
T d1htwa_ 30 TEKAIMVYLNGDLGAGKTTLTRGMLQGIGHQ 60 (158)
T ss_dssp CSSCEEEEEECSTTSSHHHHHHHHHHHTTCC
T ss_pred CCCCeEEEEecCCCccHHHHHHHHHhhcccc
Confidence 3455668899999999999999999999865
No 319
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.64 E-value=0.025 Score=50.72 Aligned_cols=21 Identities=19% Similarity=0.226 Sum_probs=18.9
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++|+|++|||||||++.+.+.
T Consensus 7 v~liG~~~vGKTsLl~~~~~~ 27 (167)
T d1xtqa1 7 IAILGYRSVGKSSLTIQFVEG 27 (167)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 789999999999999998763
No 320
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=92.60 E-value=0.062 Score=48.24 Aligned_cols=22 Identities=41% Similarity=0.478 Sum_probs=19.5
Q ss_pred CceEEEcCCCCChHHHHHHHHH
Q psy11254 525 KGCLLYGPPGTGKTLLARAVAS 546 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~ 546 (741)
-+++++|++|+|||+|+..+.+
T Consensus 17 ~kI~vvG~~~vGKSsLi~~l~~ 38 (176)
T d1fzqa_ 17 VRILLLGLDNAGKTTLLKQLAS 38 (176)
T ss_dssp EEEEEEESTTSSHHHHHHHHCC
T ss_pred EEEEEECCCCCCHHHHHHHHhc
Confidence 3699999999999999998865
No 321
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.59 E-value=0.023 Score=51.15 Aligned_cols=20 Identities=25% Similarity=0.474 Sum_probs=18.2
Q ss_pred ceEEcCCCChHHHHHHHHHH
Q psy11254 208 CLLYGPPGTGKTLLARAVAS 227 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~ 227 (741)
++++|.+|||||||++.+.+
T Consensus 5 i~viG~~~vGKTsLi~r~~~ 24 (171)
T d2erxa1 5 VAVFGAGGVGKSSLVLRFVK 24 (171)
T ss_dssp EEEECCTTSSHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHh
Confidence 67999999999999998875
No 322
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.53 E-value=0.032 Score=50.43 Aligned_cols=21 Identities=24% Similarity=0.363 Sum_probs=18.9
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++|+|.+|||||||++.+.+.
T Consensus 9 v~lvG~~~vGKTsLi~r~~~~ 29 (173)
T d2fn4a1 9 LVVVGGGGVGKSALTIQFIQS 29 (173)
T ss_dssp EEEEECTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 889999999999999987753
No 323
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=92.52 E-value=0.022 Score=51.87 Aligned_cols=22 Identities=36% Similarity=0.484 Sum_probs=19.5
Q ss_pred CCceEEcCCCChHHHHHHHHHH
Q psy11254 206 KGCLLYGPPGTGKTLLARAVAS 227 (741)
Q Consensus 206 ~GvlL~Gp~GtGKTtL~r~ia~ 227 (741)
.|++|.||+|+||||++-.+..
T Consensus 16 ~gvli~G~sG~GKS~lal~l~~ 37 (177)
T d1knxa2 16 VGVLLTGRSGIGKSECALDLIN 37 (177)
T ss_dssp EEEEEEESSSSSHHHHHHHHHT
T ss_pred EEEEEEcCCCCCHHHHHHHHHH
Confidence 4699999999999999988764
No 324
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.50 E-value=0.027 Score=50.30 Aligned_cols=21 Identities=24% Similarity=0.313 Sum_probs=18.8
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++++|.+|||||||++.+.+.
T Consensus 3 v~vvG~~~vGKTsLi~r~~~~ 23 (164)
T d1yzqa1 3 LVFLGEQSVGKTSLITRFMYD 23 (164)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 679999999999999998863
No 325
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.47 E-value=0.027 Score=50.53 Aligned_cols=20 Identities=30% Similarity=0.325 Sum_probs=18.3
Q ss_pred ceEEcCCCChHHHHHHHHHH
Q psy11254 208 CLLYGPPGTGKTLLARAVAS 227 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~ 227 (741)
++|+|.+|||||||++.+.+
T Consensus 6 ivlvG~~~vGKTsLi~r~~~ 25 (167)
T d1z08a1 6 VVLLGEGCVGKTSLVLRYCE 25 (167)
T ss_dssp EEEECCTTSCHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 67999999999999998875
No 326
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=92.42 E-value=0.14 Score=51.08 Aligned_cols=24 Identities=33% Similarity=0.408 Sum_probs=21.1
Q ss_pred CceEEEcCCCCChHHHHHHHHHHh
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
..+.+.||||+|||||...++..+
T Consensus 52 ~~igitG~pGaGKSTli~~l~~~~ 75 (323)
T d2qm8a1 52 IRVGITGVPGVGKSTTIDALGSLL 75 (323)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHH
T ss_pred eEEeeeCCCCCCHHHHHHHHHHHH
Confidence 458899999999999999998764
No 327
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=92.42 E-value=0.027 Score=51.37 Aligned_cols=20 Identities=30% Similarity=0.534 Sum_probs=18.3
Q ss_pred ceEEcCCCChHHHHHHHHHH
Q psy11254 208 CLLYGPPGTGKTLLARAVAS 227 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~ 227 (741)
++++|.+|||||||++.+.+
T Consensus 5 v~vvG~~~vGKSSLi~~l~~ 24 (184)
T d1vg8a_ 5 VIILGDSGVGKTSLMNQYVN 24 (184)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 67999999999999998876
No 328
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=92.40 E-value=0.011 Score=53.81 Aligned_cols=21 Identities=19% Similarity=0.309 Sum_probs=19.2
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
|+|+|+|++|||||+++|.+.
T Consensus 19 I~lvG~~NvGKSSL~n~L~~~ 39 (188)
T d1puia_ 19 VAFAGRSNAGKSSALNTLTNQ 39 (188)
T ss_dssp EEEEECTTSSHHHHHTTTCCC
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 899999999999999999763
No 329
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.36 E-value=0.029 Score=50.10 Aligned_cols=20 Identities=25% Similarity=0.404 Sum_probs=18.3
Q ss_pred ceEEcCCCChHHHHHHHHHH
Q psy11254 208 CLLYGPPGTGKTLLARAVAS 227 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~ 227 (741)
++++|++|+|||||++.+.+
T Consensus 5 v~liG~~~vGKTsLl~~~~~ 24 (165)
T d1z06a1 5 IIVIGDSNVGKTCLTYRFCA 24 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 67999999999999998875
No 330
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=92.34 E-value=0.045 Score=51.19 Aligned_cols=25 Identities=24% Similarity=0.379 Sum_probs=21.9
Q ss_pred CceEEEcCCCCChHHHHHHHHHHhC
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQLD 549 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~~ 549 (741)
.-++|+||+|+||||+.+.+.....
T Consensus 3 ~livi~GPSG~GK~tl~~~L~~~~p 27 (205)
T d1s96a_ 3 TLYIVSAPSGAGKSSLIQALLKTQP 27 (205)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHSC
T ss_pred eEEEEECCCCCCHHHHHHHHHhhCC
Confidence 3478999999999999999998865
No 331
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=92.32 E-value=0.032 Score=52.99 Aligned_cols=26 Identities=23% Similarity=0.236 Sum_probs=22.0
Q ss_pred CCCC--ceEEcCCCChHHHHHHHHHHhc
Q psy11254 204 PPKG--CLLYGPPGTGKTLLARAVASQL 229 (741)
Q Consensus 204 ~~~G--vlL~Gp~GtGKTtL~r~ia~~l 229 (741)
+++| ++|.||||+|||+++--+|...
T Consensus 31 l~~G~l~~i~G~~G~GKT~~~l~~a~~~ 58 (258)
T d2i1qa2 31 LESQSVTEFAGVFGSGKTQIMHQSCVNL 58 (258)
T ss_dssp EETTEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred ccCCeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 4455 7899999999999999998655
No 332
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.27 E-value=0.029 Score=50.59 Aligned_cols=20 Identities=35% Similarity=0.532 Sum_probs=18.4
Q ss_pred ceEEcCCCChHHHHHHHHHH
Q psy11254 208 CLLYGPPGTGKTLLARAVAS 227 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~ 227 (741)
++|+|.+|+|||||++.+.+
T Consensus 8 I~lvG~~~vGKTsll~~~~~ 27 (174)
T d2bmea1 8 FLVIGNAGTGKSCLLHQFIE 27 (174)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999998875
No 333
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.25 E-value=0.03 Score=50.79 Aligned_cols=21 Identities=29% Similarity=0.468 Sum_probs=19.1
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++++|++|+|||||++.+.+.
T Consensus 10 i~vvG~~~vGKTsli~~l~~~ 30 (177)
T d1x3sa1 10 ILIIGESGVGKSSLLLRFTDD 30 (177)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 789999999999999998863
No 334
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=92.22 E-value=0.043 Score=51.18 Aligned_cols=27 Identities=30% Similarity=0.405 Sum_probs=22.7
Q ss_pred eEEEcCCCCChHHHHHHHHHHhCccEEE
Q psy11254 527 CLLYGPPGTGKTLLARAVASQLDANFLK 554 (741)
Q Consensus 527 ~ll~G~~G~GKt~l~~~~a~~~~~~~~~ 554 (741)
+.++|++||||||+++.+. ..|.+++.
T Consensus 5 IgITG~igSGKStv~~~l~-~~G~~vid 31 (205)
T d1jjva_ 5 VGLTGGIGSGKTTIANLFT-DLGVPLVD 31 (205)
T ss_dssp EEEECSTTSCHHHHHHHHH-TTTCCEEE
T ss_pred EEEECCCCCCHHHHHHHHH-HCCCeEEE
Confidence 5689999999999999886 57877654
No 335
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.21 E-value=0.026 Score=58.50 Aligned_cols=57 Identities=12% Similarity=0.253 Sum_probs=37.6
Q ss_pred HHHHHHhcCCeEEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCCcc
Q psy11254 575 MFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPA 645 (741)
Q Consensus 575 ~f~~a~~~~p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld~a 645 (741)
++......++.+++|||+|.- -|+.....+..+|..+... +.=+|++||.|+.++.|
T Consensus 346 ~lal~~~~~~pililDE~d~~----------Ld~~~~~~~~~~l~~~~~~----~~Q~I~iTH~~~~~~~a 402 (427)
T d1w1wa_ 346 LFAINSYQPSPFFVLDEVDAA----------LDITNVQRIAAYIRRHRNP----DLQFIVISLKNTMFEKS 402 (427)
T ss_dssp HHHHHTSSCCSEEEESSTTTT----------CCHHHHHHHHHHHHHHCBT----TBEEEEECSCHHHHTTC
T ss_pred HHHHhcCCCCCEEEEeCCCCC----------CCHHHHHHHHHHHHHHhCC----CCEEEEEeCCHHHHHhc
Confidence 344444455569999999973 4555566777778766432 23389999998766653
No 336
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.20 E-value=0.031 Score=50.29 Aligned_cols=21 Identities=24% Similarity=0.336 Sum_probs=18.9
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++++|.+|||||||++.+.+.
T Consensus 9 i~vvG~~~vGKTsLi~~l~~~ 29 (170)
T d1r2qa_ 9 LVLLGESAVGKSSLVLRFVKG 29 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 689999999999999998854
No 337
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.20 E-value=0.028 Score=50.58 Aligned_cols=21 Identities=48% Similarity=0.778 Sum_probs=18.8
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++++|++|+|||||++.+.+.
T Consensus 4 i~lvG~~~vGKTsLi~~~~~~ 24 (168)
T d2gjsa1 4 VLLLGAPGVGKSALARIFGGV 24 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCcCHHHHHHHHhCC
Confidence 579999999999999998764
No 338
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=92.19 E-value=0.073 Score=52.86 Aligned_cols=39 Identities=18% Similarity=0.227 Sum_probs=29.5
Q ss_pred CCCceEEEcCCCCChHHHHHHHHHHhC-----ccEEEEechhhh
Q psy11254 523 PPKGCLLYGPPGTGKTLLARAVASQLD-----ANFLKVVSSAIV 561 (741)
Q Consensus 523 ~~~~~ll~G~~G~GKt~l~~~~a~~~~-----~~~~~v~~~~l~ 561 (741)
.|--|.+.|++|+||||+|+.|+..+. .....++..++.
T Consensus 79 ~P~iIGIaG~sgSGKSTla~~L~~lL~~~~~~~~v~~Is~D~F~ 122 (308)
T d1sq5a_ 79 IPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGFL 122 (308)
T ss_dssp CCEEEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGGB
T ss_pred CCEEEEEeCCCCCCCcHHHHHHHHHHhhhcCCCceEEEeeeeeE
Confidence 344578999999999999999999874 345555655553
No 339
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=92.18 E-value=0.045 Score=51.87 Aligned_cols=41 Identities=24% Similarity=0.276 Sum_probs=30.3
Q ss_pred ccCCChHHHHhc--CCCCCCceEEEcCCCCChHHHHHHHHHHh
Q psy11254 508 LPLLNPELFQRV--GITPPKGCLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 508 ~~~~~~~~~~~~--~~~~~~~~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
.+...+.+-.-+ |++++.-++|+|+||+|||+++-.+|...
T Consensus 16 i~TG~~~LD~ll~GGl~~G~l~~i~G~~G~GKT~~~l~~a~~~ 58 (258)
T d2i1qa2 16 LSTSSSELDSVLGGGLESQSVTEFAGVFGSGKTQIMHQSCVNL 58 (258)
T ss_dssp ECCSCHHHHHHTTSSEETTEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred ecCCCHHHHHhcCCCccCCeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 344445554444 37777889999999999999998888644
No 340
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=92.16 E-value=0.04 Score=50.07 Aligned_cols=30 Identities=30% Similarity=0.392 Sum_probs=23.6
Q ss_pred CCCceEEEcCCCCChHHHHHHHHHHhCccEE
Q psy11254 523 PPKGCLLYGPPGTGKTLLARAVASQLDANFL 553 (741)
Q Consensus 523 ~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~ 553 (741)
.+.+++|.||+|+|||++|-.+... +..++
T Consensus 14 ~g~gvli~G~sG~GKS~lal~l~~~-G~~lv 43 (177)
T d1knxa2 14 FGVGVLLTGRSGIGKSECALDLINK-NHLFV 43 (177)
T ss_dssp TTEEEEEEESSSSSHHHHHHHHHTT-TCEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHHHHHc-CCcee
Confidence 3578999999999999999887653 54444
No 341
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=92.12 E-value=0.037 Score=52.55 Aligned_cols=22 Identities=32% Similarity=0.532 Sum_probs=19.9
Q ss_pred eEEEcCCCCChHHHHHHHHHHh
Q psy11254 527 CLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 527 ~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
+++.||+|+|||||.+.+...+
T Consensus 3 i~v~G~~GsGKTTLl~~ll~~~ 24 (244)
T d1yrba1 3 VVFVGTAGSGKTTLTGEFGRYL 24 (244)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEcCCCCcHHHHHHHHHHHH
Confidence 6789999999999999998765
No 342
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.09 E-value=0.032 Score=49.98 Aligned_cols=21 Identities=24% Similarity=0.406 Sum_probs=18.8
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++|+|.+|||||||++.+.+.
T Consensus 7 i~lvG~~~vGKTsli~rl~~~ 27 (167)
T d1z0ja1 7 VCLLGDTGVGKSSIMWRFVED 27 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 689999999999999988753
No 343
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=92.07 E-value=0.043 Score=48.50 Aligned_cols=23 Identities=26% Similarity=0.348 Sum_probs=20.5
Q ss_pred CceEEEcCCCCChHHHHHHHHHH
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
-+++|+|+||+|||||++.+.+.
T Consensus 6 ~kI~ivG~~~vGKSSLi~~~~~~ 28 (169)
T d1upta_ 6 MRILILGLDGAGKTTILYRLQVG 28 (169)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHhCC
Confidence 46899999999999999998764
No 344
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.05 E-value=0.037 Score=48.56 Aligned_cols=22 Identities=27% Similarity=0.379 Sum_probs=20.0
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
+++|+|+||+|||+|+..+.+.
T Consensus 2 KI~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 2 KLLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 5899999999999999998874
No 345
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.99 E-value=0.033 Score=50.41 Aligned_cols=21 Identities=24% Similarity=0.279 Sum_probs=18.9
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++++|++|+|||||++.+.+.
T Consensus 5 ivvvG~~~vGKTsLi~~~~~~ 25 (177)
T d1kmqa_ 5 LVIVGDGACGKTCLLIVNSKD 25 (177)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 789999999999999988764
No 346
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=91.91 E-value=0.051 Score=50.78 Aligned_cols=26 Identities=38% Similarity=0.535 Sum_probs=21.7
Q ss_pred eEEEcCCCCChHHHHHHHHHHhCccEE
Q psy11254 527 CLLYGPPGTGKTLLARAVASQLDANFL 553 (741)
Q Consensus 527 ~ll~G~~G~GKt~l~~~~a~~~~~~~~ 553 (741)
+.++|++||||||+++.+. .+|.+++
T Consensus 6 IgitG~igSGKStv~~~l~-~~G~~vi 31 (208)
T d1vhta_ 6 VALTGGIGSGKSTVANAFA-DLGINVI 31 (208)
T ss_dssp EEEECCTTSCHHHHHHHHH-HTTCEEE
T ss_pred EEEECCCcCCHHHHHHHHH-HCCCcEE
Confidence 5689999999999999886 6776654
No 347
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=91.87 E-value=0.051 Score=48.98 Aligned_cols=24 Identities=29% Similarity=0.425 Sum_probs=20.8
Q ss_pred CCceEEEcCCCCChHHHHHHHHHH
Q psy11254 524 PKGCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 524 ~~~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
+.+++|.|++|+|||+++-.+...
T Consensus 15 g~gvli~G~sg~GKS~la~~l~~~ 38 (169)
T d1ko7a2 15 GVGVLITGDSGIGKSETALELIKR 38 (169)
T ss_dssp TEEEEEEESTTSSHHHHHHHHHHT
T ss_pred CEEEEEEeCCCCCHHHHHHHHHHc
Confidence 578999999999999998776654
No 348
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.80 E-value=0.036 Score=50.01 Aligned_cols=20 Identities=30% Similarity=0.507 Sum_probs=18.1
Q ss_pred ceEEcCCCChHHHHHHHHHH
Q psy11254 208 CLLYGPPGTGKTLLARAVAS 227 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~ 227 (741)
++++|++|||||||++.+.+
T Consensus 9 I~vvG~~~vGKSSli~~~~~ 28 (174)
T d1wmsa_ 9 VILLGDGGVGKSSLMNRYVT 28 (174)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHh
Confidence 78999999999999987775
No 349
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.80 E-value=0.036 Score=49.76 Aligned_cols=20 Identities=35% Similarity=0.497 Sum_probs=18.3
Q ss_pred ceEEcCCCChHHHHHHHHHH
Q psy11254 208 CLLYGPPGTGKTLLARAVAS 227 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~ 227 (741)
++++|++|+|||+|++.+.+
T Consensus 9 i~vvG~~~vGKTsli~~~~~ 28 (170)
T d2g6ba1 9 VMLVGDSGVGKTCLLVRFKD 28 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999998765
No 350
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=91.76 E-value=0.032 Score=50.37 Aligned_cols=23 Identities=30% Similarity=0.466 Sum_probs=19.8
Q ss_pred CCceEEcCCCChHHHHHHHHHHh
Q psy11254 206 KGCLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 206 ~GvlL~Gp~GtGKTtL~r~ia~~ 228 (741)
.|++|.|++|+||||++-.+...
T Consensus 16 ~gvli~G~sg~GKS~la~~l~~~ 38 (169)
T d1ko7a2 16 VGVLITGDSGIGKSETALELIKR 38 (169)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHT
T ss_pred EEEEEEeCCCCCHHHHHHHHHHc
Confidence 46999999999999999777654
No 351
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=91.75 E-value=0.033 Score=51.27 Aligned_cols=29 Identities=24% Similarity=0.219 Sum_probs=24.6
Q ss_pred CceEEEcCCCCChHHHHHHHHHHhCccEE
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQLDANFL 553 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~~~~~~ 553 (741)
--|+|.|+.|+||||+++.|++.++...+
T Consensus 10 ~~I~ieG~~GsGKTTl~~~L~~~l~~~~~ 38 (197)
T d2vp4a1 10 FTVLIEGNIGSGKTTYLNHFEKYKNDICL 38 (197)
T ss_dssp EEEEEECSTTSCHHHHHHTTGGGTTTEEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCcEE
Confidence 34789999999999999999999875443
No 352
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.74 E-value=0.036 Score=51.09 Aligned_cols=21 Identities=33% Similarity=0.491 Sum_probs=18.8
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++++|++|||||||++.+.+.
T Consensus 9 ivvvG~~~vGKTsli~~l~~~ 29 (194)
T d2bcgy1 9 LLLIGNSGVGKSCLLLRFSDD 29 (194)
T ss_dssp EEEEESTTSSHHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHhhC
Confidence 789999999999999988753
No 353
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=91.73 E-value=0.02 Score=51.75 Aligned_cols=21 Identities=24% Similarity=0.305 Sum_probs=19.0
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++++|+||+|||||++.+.+.
T Consensus 15 IvlvG~~~vGKTSli~rl~~~ 35 (173)
T d1e0sa_ 15 ILMLGLDAAGKTTILYKLKLG 35 (173)
T ss_dssp EEEEEETTSSHHHHHHHTTCC
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 889999999999999998753
No 354
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=91.63 E-value=0.033 Score=54.08 Aligned_cols=22 Identities=23% Similarity=0.412 Sum_probs=20.3
Q ss_pred ceEEcCCCChHHHHHHHHHHhc
Q psy11254 208 CLLYGPPGTGKTLLARAVASQL 229 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l 229 (741)
++|+|.+|+|||||+++|.|.-
T Consensus 35 I~LvG~tg~GKSSliN~ilg~~ 56 (257)
T d1h65a_ 35 ILVMGKGGVGKSSTVNSIIGER 56 (257)
T ss_dssp EEEEESTTSSHHHHHHHHHTSC
T ss_pred EEEECCCCCcHHHHHHHHhCCC
Confidence 8899999999999999999853
No 355
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=91.62 E-value=0.04 Score=52.58 Aligned_cols=24 Identities=29% Similarity=0.319 Sum_probs=21.2
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCC
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDA 231 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~ 231 (741)
++|.|+.||||||+++.++...+.
T Consensus 4 IgiTG~igSGKsTva~~l~e~~g~ 27 (241)
T d1deka_ 4 IFLSGVKRSGKDTTADFIMSNYSA 27 (241)
T ss_dssp EEEECCTTSSHHHHHHHHHHHSCE
T ss_pred EEEECCCCCCHHHHHHHHHHhCCC
Confidence 579999999999999999887654
No 356
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.59 E-value=0.04 Score=49.46 Aligned_cols=21 Identities=24% Similarity=0.376 Sum_probs=18.6
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++++|.+|+|||+|++.+.+.
T Consensus 6 i~vvG~~~vGKTsLi~~~~~~ 26 (170)
T d1ek0a_ 6 LVLLGEAAVGKSSIVLRFVSN 26 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 679999999999999987754
No 357
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=91.56 E-value=0.06 Score=52.46 Aligned_cols=57 Identities=25% Similarity=0.352 Sum_probs=38.1
Q ss_pred CCCceEEEcCCCCChHHHHHHHHHHhCccEEEEechhhhccccchHHHHHHHHHHHHHhcCCeEEEEccccc
Q psy11254 523 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDA 594 (741)
Q Consensus 523 ~~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~~~l~~~~~g~s~~~i~~~f~~a~~~~p~Vl~iDE~d~ 594 (741)
....++|+||++||||+++.+|+..++ .+..+..+. +. |..+......++++||+..
T Consensus 103 k~n~~~l~G~~~tGKS~f~~~i~~~lg-~~~~~~~~~--~~------------f~l~~l~~k~~~~~~e~~~ 159 (267)
T d1u0ja_ 103 KRNTIWLFGPATTGKTNIAEAIAHTVP-FYGCVNWTN--EN------------FPFNDCVDKMVIWWEEGKM 159 (267)
T ss_dssp TCCEEEEECSTTSSHHHHHHHHHHHSS-CEEECCTTC--SS------------CTTGGGSSCSEEEECSCCE
T ss_pred ccEEEEEEcCCCCCHHHHHHHHHHHhc-chhhccccC--CC------------ccccccCCCEEEEEeCCCc
Confidence 344588999999999999999999985 344333221 11 2233333446899999764
No 358
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.55 E-value=0.034 Score=50.23 Aligned_cols=21 Identities=38% Similarity=0.555 Sum_probs=18.9
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++|+|++|+|||||++.+.+.
T Consensus 6 v~lvG~~~vGKTsLi~~~~~~ 26 (172)
T d2g3ya1 6 VVLIGEQGVGKSTLANIFAGV 26 (172)
T ss_dssp EEEECCTTSSHHHHHHHHHCC
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 689999999999999998764
No 359
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=91.47 E-value=0.041 Score=49.37 Aligned_cols=20 Identities=25% Similarity=0.439 Sum_probs=18.4
Q ss_pred ceEEcCCCChHHHHHHHHHH
Q psy11254 208 CLLYGPPGTGKTLLARAVAS 227 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~ 227 (741)
++|+|.+|+|||||++.+.+
T Consensus 7 ivlvG~~~vGKTsli~~~~~ 26 (168)
T d1u8za_ 7 VIMVGSGGVGKSALTLQFMY 26 (168)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999998875
No 360
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.45 E-value=0.022 Score=54.23 Aligned_cols=23 Identities=13% Similarity=0.203 Sum_probs=21.1
Q ss_pred ceEEcCCCChHHHHHHHHHHhcC
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLD 230 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~ 230 (741)
+.+-|+-||||||+++.|+..+.
T Consensus 5 I~ieG~dGsGKST~~~~L~~~l~ 27 (241)
T d1p5zb_ 5 ISIEGNIAAGKSTFVNILKQLCE 27 (241)
T ss_dssp EEEECSTTSSHHHHHTTTGGGCT
T ss_pred EEEECCCCCCHHHHHHHHHHHHh
Confidence 67999999999999999999874
No 361
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=91.41 E-value=0.029 Score=51.09 Aligned_cols=20 Identities=30% Similarity=0.443 Sum_probs=18.3
Q ss_pred ceEEcCCCChHHHHHHHHHH
Q psy11254 208 CLLYGPPGTGKTLLARAVAS 227 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~ 227 (741)
++++|++|+|||||++.+.+
T Consensus 20 I~lvG~~~vGKTsLi~~l~~ 39 (182)
T d1moza_ 20 ILILGLDGAGKTTILYRLQI 39 (182)
T ss_dssp EEEEEETTSSHHHHHHHTCC
T ss_pred EEEECCCCCCHHHHHHHHhc
Confidence 88999999999999998754
No 362
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.41 E-value=0.042 Score=49.13 Aligned_cols=21 Identities=24% Similarity=0.414 Sum_probs=18.9
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++++|.+|+|||+|++.+.+.
T Consensus 6 ivvvG~~~vGKTsli~r~~~~ 26 (167)
T d1c1ya_ 6 LVVLGSGGVGKSALTVQFVQG 26 (167)
T ss_dssp EEEECSTTSSHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHcC
Confidence 689999999999999988764
No 363
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=91.38 E-value=0.018 Score=52.87 Aligned_cols=23 Identities=30% Similarity=0.336 Sum_probs=20.3
Q ss_pred eEEEcCCCCChHHHHHHHHHHhC
Q psy11254 527 CLLYGPPGTGKTLLARAVASQLD 549 (741)
Q Consensus 527 ~ll~G~~G~GKt~l~~~~a~~~~ 549 (741)
.+|+||||+||||++.||.-.+.
T Consensus 27 tvi~G~NGsGKStil~Ai~~~L~ 49 (222)
T d1qhla_ 27 TTLSGGNGAGKSTTMAAFVTALI 49 (222)
T ss_dssp HHHHSCCSHHHHHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHHhc
Confidence 47899999999999999987764
No 364
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=91.37 E-value=0.048 Score=52.01 Aligned_cols=26 Identities=27% Similarity=0.225 Sum_probs=22.9
Q ss_pred eEEEcCCCCChHHHHHHHHHHhCccE
Q psy11254 527 CLLYGPPGTGKTLLARAVASQLDANF 552 (741)
Q Consensus 527 ~ll~G~~G~GKt~l~~~~a~~~~~~~ 552 (741)
|.|+|+.||||||+|+.+++.++...
T Consensus 4 IgiTG~igSGKsTva~~l~e~~g~~~ 29 (241)
T d1deka_ 4 IFLSGVKRSGKDTTADFIMSNYSAVK 29 (241)
T ss_dssp EEEECCTTSSHHHHHHHHHHHSCEEE
T ss_pred EEEECCCCCCHHHHHHHHHHhCCCeE
Confidence 68999999999999999999887543
No 365
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.26 E-value=0.045 Score=49.20 Aligned_cols=21 Identities=24% Similarity=0.374 Sum_probs=19.0
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++|+|.+|||||||++.+.+.
T Consensus 7 i~lvG~~~vGKTsll~~~~~~ 27 (169)
T d1x1ra1 7 LVVVGDGGVGKSALTIQFFQK 27 (169)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 789999999999999988863
No 366
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=91.18 E-value=0.04 Score=49.09 Aligned_cols=23 Identities=22% Similarity=0.316 Sum_probs=20.3
Q ss_pred ceEEEcCCCCChHHHHHHHHHHh
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
++++.|++|+|||+|+..+.+..
T Consensus 4 ki~ivG~~~~GKTsLi~~l~~~~ 26 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTILKKFNGED 26 (165)
T ss_dssp EEEEECSTTSSHHHHHHHHTTCC
T ss_pred EEEEECCCCCCHHHHHHHHcCCC
Confidence 58999999999999999987643
No 367
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.17 E-value=0.046 Score=49.76 Aligned_cols=21 Identities=29% Similarity=0.521 Sum_probs=18.9
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++++|.+|+|||||++.+.+.
T Consensus 8 ivviG~~~vGKTsli~~~~~~ 28 (183)
T d1mh1a_ 8 CVVVGDGAVGKTCLLISYTTN 28 (183)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 789999999999999988763
No 368
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.15 E-value=0.027 Score=50.87 Aligned_cols=20 Identities=35% Similarity=0.463 Sum_probs=8.4
Q ss_pred ceEEcCCCChHHHHHHHHHH
Q psy11254 208 CLLYGPPGTGKTLLARAVAS 227 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~ 227 (741)
++++|.+|||||||++.+.+
T Consensus 9 i~vvG~~~vGKTsLi~~l~~ 28 (173)
T d2fu5c1 9 LLLIGDSGVGKTCVLFRFSE 28 (173)
T ss_dssp EEEECCCCC-----------
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999987775
No 369
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.10 E-value=0.062 Score=50.29 Aligned_cols=30 Identities=20% Similarity=0.171 Sum_probs=23.5
Q ss_pred ceEEEcCCCCChHHHHHHHHHHh---CccEEEE
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQL---DANFLKV 555 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~---~~~~~~v 555 (741)
=|.|.|+.|+||||+++.|++.+ +.+.+.+
T Consensus 5 lI~ieG~dGsGKsT~~~~L~~~L~~~g~~v~~~ 37 (209)
T d1nn5a_ 5 LIVLEGVDRAGKSTQSRKLVEALCAAGHRAELL 37 (209)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEE
Confidence 36677999999999999999987 3444443
No 370
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=91.08 E-value=0.021 Score=56.30 Aligned_cols=24 Identities=13% Similarity=0.279 Sum_probs=18.6
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCC
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDA 231 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~ 231 (741)
+++.|++||||||+++++...++.
T Consensus 7 IgIaG~SGSGKTTva~~l~~i~~~ 30 (288)
T d1a7ja_ 7 ISVTGSSGAGTSTVKHTFDQIFRR 30 (288)
T ss_dssp EEEESCC---CCTHHHHHHHHHHH
T ss_pred EEEECCCCCcHHHHHHHHHHHHhh
Confidence 779999999999999999987754
No 371
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=91.06 E-value=0.06 Score=50.16 Aligned_cols=25 Identities=32% Similarity=0.415 Sum_probs=21.8
Q ss_pred CceEEEcCCCCChHHHHHHHHHHhC
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQLD 549 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~~ 549 (741)
+-|+|.|+.||||||+++.|++.+.
T Consensus 3 kfIviEG~dGsGKsT~~~~L~~~L~ 27 (210)
T d4tmka_ 3 KYIVIEGLEGAGKTTARNVVVETLE 27 (210)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHH
Confidence 4478899999999999999998773
No 372
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=91.00 E-value=0.034 Score=54.85 Aligned_cols=20 Identities=35% Similarity=0.682 Sum_probs=15.2
Q ss_pred ceEEcCCCChHHHHH-HHHHH
Q psy11254 208 CLLYGPPGTGKTLLA-RAVAS 227 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~-r~ia~ 227 (741)
+++.|+|||||||++ ..++.
T Consensus 17 ~lI~g~aGTGKTt~l~~rv~~ 37 (306)
T d1uaaa1 17 CLVLAGAGSGKTRVITNKIAH 37 (306)
T ss_dssp EEECCCTTSCHHHHHHHHHHH
T ss_pred EEEEeeCCccHHHHHHHHHHH
Confidence 789999999999754 44443
No 373
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.80 E-value=0.078 Score=50.32 Aligned_cols=30 Identities=13% Similarity=0.256 Sum_probs=25.7
Q ss_pred CCceEEEcCCCCChHHHHHHHHHHhCccEE
Q psy11254 524 PKGCLLYGPPGTGKTLLARAVASQLDANFL 553 (741)
Q Consensus 524 ~~~~ll~G~~G~GKt~l~~~~a~~~~~~~~ 553 (741)
|+-|+|-|+-||||||+++.|++.++...+
T Consensus 2 pk~IviEG~~GsGKST~~~~L~~~l~~~~i 31 (241)
T d2ocpa1 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEWHV 31 (241)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHCTTSEE
T ss_pred CeEEEEECCCCCcHHHHHHHHHHHHhhcCC
Confidence 566899999999999999999999865433
No 374
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.67 E-value=0.029 Score=50.62 Aligned_cols=21 Identities=33% Similarity=0.463 Sum_probs=17.3
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++++|++|+|||||++.+.+.
T Consensus 6 i~vvG~~~vGKTsli~~~~~~ 26 (170)
T d1i2ma_ 6 LVLVGDGGTGKTTFVKRHLTG 26 (170)
T ss_dssp EEEEECTTSSHHHHHHTTC--
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 679999999999999977653
No 375
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=90.63 E-value=0.049 Score=48.96 Aligned_cols=24 Identities=21% Similarity=0.297 Sum_probs=20.6
Q ss_pred CCceEEEcCCCCChHHHHHHHHHH
Q psy11254 524 PKGCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 524 ~~~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
..+++|+|++|+|||||...+.+.
T Consensus 13 ~~kI~lvG~~~vGKTsLl~~l~~~ 36 (186)
T d1f6ba_ 13 TGKLVFLGLDNAGKTTLLHMLKDD 36 (186)
T ss_dssp CEEEEEEEETTSSHHHHHHHHSCC
T ss_pred CCEEEEECCCCCCHHHHHHHHhCC
Confidence 346999999999999999988654
No 376
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=90.62 E-value=0.064 Score=49.62 Aligned_cols=29 Identities=17% Similarity=0.321 Sum_probs=23.6
Q ss_pred eEEEcCCCCChHHHHHHHHHHh---CccEEEE
Q psy11254 527 CLLYGPPGTGKTLLARAVASQL---DANFLKV 555 (741)
Q Consensus 527 ~ll~G~~G~GKt~l~~~~a~~~---~~~~~~v 555 (741)
|.|.|+.||||||+++.|++.+ +.+++.+
T Consensus 3 I~ieG~dGsGKST~~~~L~~~l~~~g~~v~~~ 34 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLVEKLSGAFRAAGRSVATL 34 (208)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 6788999999999999999877 3455444
No 377
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=90.58 E-value=0.099 Score=48.27 Aligned_cols=19 Identities=53% Similarity=0.609 Sum_probs=16.2
Q ss_pred CCceEEEcCCCCChHHHHH
Q psy11254 524 PKGCLLYGPPGTGKTLLAR 542 (741)
Q Consensus 524 ~~~~ll~G~~G~GKt~l~~ 542 (741)
++++++.+|+|+|||+++-
T Consensus 40 ~~~~il~apTGsGKT~~a~ 58 (202)
T d2p6ra3 40 GKNLLLAMPTAAGKTLLAE 58 (202)
T ss_dssp CSCEEEECSSHHHHHHHHH
T ss_pred CCCEEEEcCCCCchhHHHH
Confidence 4678999999999998764
No 378
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.50 E-value=0.057 Score=49.01 Aligned_cols=21 Identities=29% Similarity=0.387 Sum_probs=18.4
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++|+|.+|+|||+|++.+...
T Consensus 5 ivliG~~~vGKTsli~r~~~~ 25 (179)
T d1m7ba_ 5 IVVVGDSQCGKTALLHVFAKD 25 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 679999999999999877763
No 379
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=90.49 E-value=0.063 Score=52.61 Aligned_cols=28 Identities=32% Similarity=0.615 Sum_probs=24.0
Q ss_pred CCCCC--ceEEcCCCChHHHHHHHHHHhcC
Q psy11254 203 TPPKG--CLLYGPPGTGKTLLARAVASQLD 230 (741)
Q Consensus 203 ~~~~G--vlL~Gp~GtGKTtL~r~ia~~l~ 230 (741)
++.+| +++.|++|+|||+|+..|+....
T Consensus 39 PigrGQr~~I~g~~g~GKT~l~~~i~~~~~ 68 (289)
T d1xpua3 39 PIGRGQRGLIVAPPKAGKTMLLQNIAQSIA 68 (289)
T ss_dssp CCBTTCEEEEEECSSSSHHHHHHHHHHHHH
T ss_pred cccCCCeeeEeCCCCCCHHHHHHHHHHHHh
Confidence 55677 89999999999999999998653
No 380
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=90.46 E-value=0.046 Score=54.38 Aligned_cols=15 Identities=33% Similarity=0.514 Sum_probs=13.3
Q ss_pred ceEEcCCCChHHHHH
Q psy11254 208 CLLYGPPGTGKTLLA 222 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~ 222 (741)
+++.|+|||||||++
T Consensus 27 ~lV~g~aGSGKTt~l 41 (318)
T d1pjra1 27 LLIMAGAGSGKTRVL 41 (318)
T ss_dssp EEEEECTTSCHHHHH
T ss_pred EEEEecCCccHHHHH
Confidence 789999999999765
No 381
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.46 E-value=0.12 Score=48.39 Aligned_cols=32 Identities=28% Similarity=0.227 Sum_probs=26.6
Q ss_pred CceEEEcCCCCChHHHHHHHHHHhCccEEEEe
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQLDANFLKVV 556 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~ 556 (741)
.=|.|.|+-||||||+++.|++.+......+.
T Consensus 4 k~I~iEG~DGsGKST~~~~L~~~L~~~~~~~~ 35 (214)
T d1tmka_ 4 KLILIEGLDRTGKTTQCNILYKKLQPNCKLLK 35 (214)
T ss_dssp CEEEEEESTTSSHHHHHHHHHHHTTTSEEEEE
T ss_pred EEEEEECCCCCcHHHHHHHHHHHHHhCCEEEE
Confidence 44788999999999999999999976655543
No 382
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.42 E-value=0.067 Score=48.08 Aligned_cols=22 Identities=23% Similarity=0.437 Sum_probs=19.4
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
+++++|++|+|||+|+..+.+.
T Consensus 5 KivvvG~~~vGKTsli~r~~~~ 26 (173)
T d2a5ja1 5 KYIIIGDTGVGKSCLLLQFTDK 26 (173)
T ss_dssp EEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHhcC
Confidence 4899999999999999988754
No 383
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.42 E-value=0.058 Score=49.20 Aligned_cols=21 Identities=33% Similarity=0.555 Sum_probs=18.7
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++|+|.+|+|||||++.+...
T Consensus 12 i~lvG~~~vGKTsLi~r~~~~ 32 (185)
T d2atxa1 12 CVVVGDGAVGKTCLLMSYAND 32 (185)
T ss_dssp EEEEECTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHhhC
Confidence 789999999999999987753
No 384
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=90.41 E-value=0.062 Score=52.36 Aligned_cols=24 Identities=42% Similarity=0.620 Sum_probs=21.9
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCC
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDA 231 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~ 231 (741)
+.|+||+++|||+++.+|+..++.
T Consensus 107 ~~l~G~~~tGKS~f~~~i~~~lg~ 130 (267)
T d1u0ja_ 107 IWLFGPATTGKTNIAEAIAHTVPF 130 (267)
T ss_dssp EEEECSTTSSHHHHHHHHHHHSSC
T ss_pred EEEEcCCCCCHHHHHHHHHHHhcc
Confidence 779999999999999999998853
No 385
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.39 E-value=0.059 Score=49.41 Aligned_cols=21 Identities=29% Similarity=0.521 Sum_probs=18.3
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++|+|++|+|||+|++.+.+.
T Consensus 6 vvllG~~~vGKTSli~r~~~~ 26 (191)
T d2ngra_ 6 CVVVGDGAVGKTCLLISYTTN 26 (191)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 679999999999999877753
No 386
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=90.14 E-value=0.31 Score=43.44 Aligned_cols=23 Identities=13% Similarity=0.179 Sum_probs=20.0
Q ss_pred CCceEEEcCCCCChHHHHHHHHH
Q psy11254 524 PKGCLLYGPPGTGKTLLARAVAS 546 (741)
Q Consensus 524 ~~~~ll~G~~G~GKt~l~~~~a~ 546 (741)
..+|+|+|+|++|||||.+++.+
T Consensus 16 ~~~I~lvG~~NvGKSSL~n~L~~ 38 (188)
T d1puia_ 16 GIEVAFAGRSNAGKSSALNTLTN 38 (188)
T ss_dssp SEEEEEEECTTSSHHHHHTTTCC
T ss_pred CCEEEEECCCCCCHHHHHHHHhC
Confidence 45699999999999999998854
No 387
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=90.10 E-value=0.075 Score=47.24 Aligned_cols=22 Identities=32% Similarity=0.321 Sum_probs=19.5
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
+++|.|++|+|||+|+..+.+.
T Consensus 4 ki~i~G~~~~GKTsLl~~l~~~ 25 (164)
T d1zd9a1 4 ELTLVGLQYSGKTTFVNVIASG 25 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 5899999999999999988754
No 388
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.09 E-value=0.072 Score=49.16 Aligned_cols=23 Identities=26% Similarity=0.478 Sum_probs=20.7
Q ss_pred ceEEEcCCCCChHHHHHHHHHHh
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
.|+|+|+||+|||||+.++.+.-
T Consensus 5 ~V~lvG~~n~GKTSLln~l~~~~ 27 (209)
T d1nrjb_ 5 SIIIAGPQNSGKTSLLTLLTTDS 27 (209)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 58999999999999999998764
No 389
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.97 E-value=0.078 Score=47.12 Aligned_cols=21 Identities=14% Similarity=0.267 Sum_probs=19.0
Q ss_pred ceEEEcCCCCChHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVAS 546 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~ 546 (741)
+++++|+||+|||+|+..+.+
T Consensus 4 Kv~liG~~~vGKSsLi~rl~~ 24 (164)
T d1z2aa1 4 KMVVVGNGAVGKSSMIQRYCK 24 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 589999999999999998775
No 390
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.96 E-value=0.062 Score=51.10 Aligned_cols=26 Identities=12% Similarity=0.142 Sum_probs=22.7
Q ss_pred CceEEcCCCChHHHHHHHHHHhcCCC
Q psy11254 207 GCLLYGPPGTGKTLLARAVASQLDAN 232 (741)
Q Consensus 207 GvlL~Gp~GtGKTtL~r~ia~~l~~~ 232 (741)
=+++-|+-||||||+++.|+..+...
T Consensus 4 ~IviEG~~GsGKST~~~~L~~~l~~~ 29 (241)
T d2ocpa1 4 RLSIEGNIAVGKSTFVKLLTKTYPEW 29 (241)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHCTTS
T ss_pred EEEEECCCCCcHHHHHHHHHHHHhhc
Confidence 37799999999999999999988653
No 391
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=89.77 E-value=0.082 Score=47.26 Aligned_cols=22 Identities=27% Similarity=0.309 Sum_probs=19.6
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
+++++|++|+|||+|+..+.+.
T Consensus 7 Ki~vvG~~~vGKTsLi~~l~~~ 28 (169)
T d3raba_ 7 KILIIGNSSVGKTSFLFRYADD 28 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHcC
Confidence 4899999999999999988754
No 392
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=89.71 E-value=0.99 Score=43.42 Aligned_cols=27 Identities=33% Similarity=0.527 Sum_probs=22.5
Q ss_pred CCCCC--ceEEcCCCChHHHHHHHHHHhc
Q psy11254 203 TPPKG--CLLYGPPGTGKTLLARAVASQL 229 (741)
Q Consensus 203 ~~~~G--vlL~Gp~GtGKTtL~r~ia~~l 229 (741)
++.+| ++++|++|+|||+|+..++...
T Consensus 64 pigkGQr~~If~~~g~GKt~l~~~i~~~~ 92 (276)
T d2jdid3 64 PYAKGGKIGLFGGAGVGKTVLIMELINNV 92 (276)
T ss_dssp CEETTCEEEEEECTTSSHHHHHHHHHHHH
T ss_pred cccCCCEEEeeCCCCCCHHHHHHHHHHHH
Confidence 44566 8999999999999998888663
No 393
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=89.61 E-value=0.13 Score=46.07 Aligned_cols=24 Identities=21% Similarity=0.212 Sum_probs=20.5
Q ss_pred CceEEEcCCCCChHHHHHHHHHHh
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
-+++++|+||+|||+++..+....
T Consensus 13 ~kIvlvG~~~vGKTSli~rl~~~~ 36 (173)
T d1e0sa_ 13 MRILMLGLDAAGKTTILYKLKLGQ 36 (173)
T ss_dssp EEEEEEEETTSSHHHHHHHTTCCC
T ss_pred EEEEEECCCCCCHHHHHHHHhcCC
Confidence 468999999999999999887543
No 394
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=89.38 E-value=0.1 Score=51.17 Aligned_cols=34 Identities=12% Similarity=0.262 Sum_probs=23.7
Q ss_pred eEEEcCCCCChHHHHHHHHHHhC---ccEEEEechhh
Q psy11254 527 CLLYGPPGTGKTLLARAVASQLD---ANFLKVVSSAI 560 (741)
Q Consensus 527 ~ll~G~~G~GKt~l~~~~a~~~~---~~~~~v~~~~l 560 (741)
|.++|++||||||+++++.+.++ .....+.+.++
T Consensus 7 IgIaG~SGSGKTTva~~l~~i~~~~~v~~~iI~~Dsf 43 (288)
T d1a7ja_ 7 ISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAF 43 (288)
T ss_dssp EEEESCC---CCTHHHHHHHHHHHHTCCEEEEEGGGG
T ss_pred EEEECCCCCcHHHHHHHHHHHHhhcCCCeEEEeCCCC
Confidence 78999999999999999998774 34445555554
No 395
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.32 E-value=0.093 Score=47.19 Aligned_cols=22 Identities=27% Similarity=0.431 Sum_probs=19.4
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
++++.|++|+|||+|+..+.+.
T Consensus 6 Ki~vvG~~~vGKTsLi~~~~~~ 27 (175)
T d2f9la1 6 KVVLIGDSGVGKSNLLSRFTRN 27 (175)
T ss_dssp EEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4899999999999999988653
No 396
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=89.25 E-value=0.26 Score=42.66 Aligned_cols=31 Identities=29% Similarity=0.417 Sum_probs=21.5
Q ss_pred EEEcCCCCChHH-HHHHHH--HHhCccEEEEech
Q psy11254 528 LLYGPPGTGKTL-LARAVA--SQLDANFLKVVSS 558 (741)
Q Consensus 528 ll~G~~G~GKt~-l~~~~a--~~~~~~~~~v~~~ 558 (741)
+++||..+|||| |++.+- ...+...+.++++
T Consensus 6 ~i~GpMfsGKTteLi~~~~~~~~~~~kv~~ikp~ 39 (139)
T d2b8ta1 6 FITGPMFAGKTAELIRRLHRLEYADVKYLVFKPK 39 (139)
T ss_dssp EEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEccccCHHHHHHHHHHHHHHHCCCcEEEEEEc
Confidence 689999999998 666653 3335566556544
No 397
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.08 E-value=0.1 Score=46.44 Aligned_cols=22 Identities=23% Similarity=0.421 Sum_probs=19.7
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
+++++|++|+|||+|+..+.+.
T Consensus 5 Ki~lvG~~~vGKTsLi~r~~~~ 26 (167)
T d1kaoa_ 5 KVVVLGSGGVGKSALTVQFVTG 26 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5899999999999999988764
No 398
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.98 E-value=0.091 Score=47.49 Aligned_cols=21 Identities=19% Similarity=0.230 Sum_probs=19.1
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++++|++|+|||||++.+.+.
T Consensus 8 i~vlG~~~vGKTsLi~~~~~~ 28 (175)
T d2bmja1 8 LGVLGDARSGKSSLIHRFLTG 28 (175)
T ss_dssp EEEECCTTTTHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 789999999999999988764
No 399
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=88.87 E-value=0.11 Score=46.61 Aligned_cols=21 Identities=29% Similarity=0.490 Sum_probs=18.9
Q ss_pred ceEEEcCCCCChHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVAS 546 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~ 546 (741)
+++++|++|+|||+|+..+.+
T Consensus 4 Ki~~vG~~~vGKSsLi~~~~~ 24 (175)
T d1ky3a_ 4 KVIILGDSGVGKTSLMHRYVN 24 (175)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHc
Confidence 489999999999999998875
No 400
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.84 E-value=0.099 Score=46.74 Aligned_cols=22 Identities=36% Similarity=0.522 Sum_probs=19.7
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
+++++|++|+|||+|++.+.+.
T Consensus 7 Ki~lvG~~~vGKTsLi~~l~~~ 28 (171)
T d2ew1a1 7 KIVLIGNAGVGKTCLVRRFTQG 28 (171)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5899999999999999998863
No 401
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.75 E-value=0.11 Score=46.25 Aligned_cols=21 Identities=29% Similarity=0.292 Sum_probs=19.1
Q ss_pred ceEEEcCCCCChHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVAS 546 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~ 546 (741)
+++|+|.+|+|||+|+..+.+
T Consensus 5 KivlvG~~~vGKTsLi~r~~~ 25 (167)
T d1z08a1 5 KVVLLGEGCVGKTSLVLRYCE 25 (167)
T ss_dssp EEEEECCTTSCHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 589999999999999998875
No 402
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=88.75 E-value=0.081 Score=47.74 Aligned_cols=22 Identities=18% Similarity=0.335 Sum_probs=19.7
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
.|+|+|+||+|||||..+|.+.
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~~ 23 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTGK 23 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4799999999999999999864
No 403
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.72 E-value=0.085 Score=48.27 Aligned_cols=19 Identities=26% Similarity=0.478 Sum_probs=17.4
Q ss_pred ceEEcCCCChHHHHHHHHH
Q psy11254 208 CLLYGPPGTGKTLLARAVA 226 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia 226 (741)
++|+|.+|+|||||++.+.
T Consensus 5 ivllG~~~vGKTsll~r~~ 23 (200)
T d1zcba2 5 ILLLGAGESGKSTFLKQMR 23 (200)
T ss_dssp EEEECSTTSSHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHh
Confidence 6799999999999999883
No 404
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.66 E-value=0.11 Score=46.15 Aligned_cols=22 Identities=23% Similarity=0.437 Sum_probs=19.5
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
++++.|.+|+|||+|+..+.+.
T Consensus 6 KivlvG~~~vGKTsli~~~~~~ 27 (166)
T d1z0fa1 6 KYIIIGDMGVGKSCLLHQFTEK 27 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4899999999999999988763
No 405
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=88.53 E-value=0.088 Score=48.19 Aligned_cols=21 Identities=19% Similarity=0.302 Sum_probs=19.5
Q ss_pred ceEEEcCCCCChHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVAS 546 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~ 546 (741)
.|+|+|+||+|||||..++.+
T Consensus 25 ~I~lvG~~n~GKSTLin~L~g 45 (195)
T d1svia_ 25 EIALAGRSNVGKSSFINSLIN 45 (195)
T ss_dssp EEEEEEBTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHhcC
Confidence 599999999999999999975
No 406
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.53 E-value=0.11 Score=46.45 Aligned_cols=21 Identities=24% Similarity=0.344 Sum_probs=19.2
Q ss_pred ceEEEcCCCCChHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVAS 546 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~ 546 (741)
+++|+|.+|+|||+|+..+.+
T Consensus 7 Ki~lvG~~~vGKTsLi~r~~~ 27 (171)
T d2erya1 7 RLVVVGGGGVGKSALTIQFIQ 27 (171)
T ss_dssp EEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 589999999999999998775
No 407
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=88.47 E-value=0.11 Score=46.15 Aligned_cols=22 Identities=32% Similarity=0.445 Sum_probs=19.6
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
++++.|++|+|||+|+..+.+.
T Consensus 4 Ki~vvG~~~vGKTSli~~l~~~ 25 (166)
T d1g16a_ 4 KILLIGDSGVGKSCLLVRFVED 25 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4799999999999999988764
No 408
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.45 E-value=0.06 Score=51.01 Aligned_cols=26 Identities=15% Similarity=0.203 Sum_probs=23.1
Q ss_pred CceEEEcCCCCChHHHHHHHHHHhCc
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQLDA 550 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~~~ 550 (741)
+-|.|-|+-||||||+++.|++.+..
T Consensus 3 k~I~ieG~dGsGKST~~~~L~~~l~~ 28 (241)
T d1p5zb_ 3 KKISIEGNIAAGKSTFVNILKQLCED 28 (241)
T ss_dssp EEEEEECSTTSSHHHHHTTTGGGCTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhc
Confidence 45889999999999999999998854
No 409
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=88.29 E-value=0.12 Score=46.76 Aligned_cols=21 Identities=29% Similarity=0.491 Sum_probs=19.0
Q ss_pred ceEEEcCCCCChHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVAS 546 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~ 546 (741)
+++++|.+|+|||+|+..+.+
T Consensus 4 Kv~vvG~~~vGKSSLi~~l~~ 24 (184)
T d1vg8a_ 4 KVIILGDSGVGKTSLMNQYVN 24 (184)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 489999999999999998875
No 410
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=88.27 E-value=0.43 Score=43.93 Aligned_cols=26 Identities=31% Similarity=0.370 Sum_probs=21.2
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCc
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANF 233 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~ 233 (741)
.++.+|.|+|||.++-.++..++...
T Consensus 88 ~ll~~~tG~GKT~~a~~~~~~~~~~~ 113 (206)
T d2fz4a1 88 GCIVLPTGSGKTHVAMAAINELSTPT 113 (206)
T ss_dssp EEEEESSSTTHHHHHHHHHHHSCSCE
T ss_pred cEEEeCCCCCceehHHhHHHHhcCce
Confidence 46889999999999888887776543
No 411
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.24 E-value=0.12 Score=45.98 Aligned_cols=22 Identities=23% Similarity=0.459 Sum_probs=19.6
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
+++++|++|+|||+|+..+.+.
T Consensus 4 Ki~lvG~~~vGKTsli~r~~~~ 25 (168)
T d2atva1 4 KLAIFGRAGVGKSALVVRFLTK 25 (168)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 5899999999999999988864
No 412
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=88.16 E-value=0.13 Score=50.44 Aligned_cols=21 Identities=33% Similarity=0.632 Sum_probs=15.7
Q ss_pred CceEEEcCCCCChHHH-HHHHH
Q psy11254 525 KGCLLYGPPGTGKTLL-ARAVA 545 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l-~~~~a 545 (741)
..+++.|+||||||++ +..++
T Consensus 15 ~~~lI~g~aGTGKTt~l~~rv~ 36 (306)
T d1uaaa1 15 GPCLVLAGAGSGKTRVITNKIA 36 (306)
T ss_dssp SEEEECCCTTSCHHHHHHHHHH
T ss_pred CCEEEEeeCCccHHHHHHHHHH
Confidence 4478999999999975 34333
No 413
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.09 E-value=0.12 Score=46.19 Aligned_cols=21 Identities=24% Similarity=0.436 Sum_probs=18.9
Q ss_pred ceEEEcCCCCChHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVAS 546 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~ 546 (741)
+++++|.+|+|||+|+..+.+
T Consensus 4 Ki~viG~~~vGKTsLi~r~~~ 24 (171)
T d2erxa1 4 RVAVFGAGGVGKSSLVLRFVK 24 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 489999999999999998775
No 414
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=87.95 E-value=1 Score=40.12 Aligned_cols=22 Identities=23% Similarity=0.376 Sum_probs=19.7
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
++.++|+|++|||||+.++.+.
T Consensus 7 nIaiiG~~naGKSTL~n~L~~~ 28 (179)
T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLTEI 28 (179)
T ss_dssp EEEEEECTTSSHHHHHHHHHTT
T ss_pred EEEEEeCCCCcHHHHHHHHHHh
Confidence 5899999999999999999853
No 415
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=87.93 E-value=0.79 Score=44.24 Aligned_cols=29 Identities=28% Similarity=0.323 Sum_probs=22.1
Q ss_pred CCCCC--ceEEcCCCChHHHHHHHHHHhcCC
Q psy11254 203 TPPKG--CLLYGPPGTGKTLLARAVASQLDA 231 (741)
Q Consensus 203 ~~~~G--vlL~Gp~GtGKTtL~r~ia~~l~~ 231 (741)
++.+| ++++|++|+|||+|+..++.....
T Consensus 63 pig~GQr~~Ifg~~g~GKt~l~~~~~~~~~~ 93 (276)
T d1fx0a3 63 PVGRGQRELIIGDRQTGKTAVATDTILNQQG 93 (276)
T ss_dssp CCBTTCBCBEEESSSSSHHHHHHHHHHTCCT
T ss_pred cccCCceEeeccCCCCChHHHHHHHHhhhcc
Confidence 45566 889999999999999865544433
No 416
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.83 E-value=0.099 Score=46.50 Aligned_cols=23 Identities=17% Similarity=0.229 Sum_probs=20.1
Q ss_pred CceEEEcCCCCChHHHHHHHHHH
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
.++++.|++|+|||+|+..+.+.
T Consensus 5 ~Kv~liG~~~vGKTsLl~~~~~~ 27 (167)
T d1xtqa1 5 RKIAILGYRSVGKSSLTIQFVEG 27 (167)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCcCHHHHHHHHHhC
Confidence 46899999999999999988753
No 417
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=87.81 E-value=0.11 Score=48.87 Aligned_cols=19 Identities=26% Similarity=0.508 Sum_probs=17.4
Q ss_pred ceEEcCCCChHHHHHHHHH
Q psy11254 208 CLLYGPPGTGKTLLARAVA 226 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia 226 (741)
++|+|++|+|||||++-+.
T Consensus 9 illlG~~~vGKTsll~~~~ 27 (221)
T d1azta2 9 LLLLGAGESGKSTIVKQMR 27 (221)
T ss_dssp EEEECSTTSSHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHh
Confidence 7899999999999999875
No 418
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.76 E-value=0.14 Score=45.72 Aligned_cols=22 Identities=23% Similarity=0.305 Sum_probs=19.5
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
+++++|.+|+|||+|+..+.+.
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~~ 29 (170)
T d1r2qa_ 8 KLVLLGESAVGKSSLVLRFVKG 29 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5899999999999999988853
No 419
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.71 E-value=0.14 Score=45.24 Aligned_cols=22 Identities=23% Similarity=0.336 Sum_probs=19.4
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
++++.|++|+|||+|+..+...
T Consensus 4 Kv~liG~~~vGKTsLl~~~~~~ 25 (165)
T d1z06a1 4 KIIVIGDSNVGKTCLTYRFCAG 25 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4899999999999999988753
No 420
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.68 E-value=0.14 Score=46.07 Aligned_cols=22 Identities=27% Similarity=0.385 Sum_probs=19.7
Q ss_pred CceEEEcCCCCChHHHHHHHHH
Q psy11254 525 KGCLLYGPPGTGKTLLARAVAS 546 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~ 546 (741)
-+++++|++|+|||+|+..+.+
T Consensus 8 iKi~vvG~~~vGKTsli~~l~~ 29 (177)
T d1x3sa1 8 LKILIIGESGVGKSSLLLRFTD 29 (177)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHh
Confidence 3589999999999999998875
No 421
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=87.57 E-value=0.9 Score=43.85 Aligned_cols=24 Identities=13% Similarity=0.041 Sum_probs=21.3
Q ss_pred CceEEEcCCCCChHHHHHHHHHHh
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
+++.++|+.|+|||||+.++....
T Consensus 7 Rni~i~gh~~~GKTtL~e~ll~~~ 30 (276)
T d2bv3a2 7 RNIGIAAHIDAGKTTTTERILYYT 30 (276)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHhc
Confidence 579999999999999999997654
No 422
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=87.55 E-value=0.57 Score=43.04 Aligned_cols=167 Identities=14% Similarity=0.073 Sum_probs=0.0
Q ss_pred CcccccChHHHHHHHHHHhhccCCChHHHhhhCCCCCCC---ceEEcCCCChHHHHHHHHHHh-----cCCCceeeeccc
Q psy11254 169 TYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKG---CLLYGPPGTGKTLLARAVASQ-----LDANFLKVVSSL 240 (741)
Q Consensus 169 ~~~~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~G---vlL~Gp~GtGKTtL~r~ia~~-----l~~~~~~v~~~~ 240 (741)
+|++++=-++..+.|.+ ..+..+.-.+...++.--. +++.+|+|+||| ++-.+.-. -......+....
T Consensus 2 sF~~l~L~~~l~~~L~~---~g~~~pt~iQ~~aip~il~g~dvi~~a~tGsGKT-lay~lp~i~~~~~~~~~~~~~~~~~ 77 (206)
T d1s2ma1 2 TFEDFYLKRELLMGIFE---AGFEKPSPIQEEAIPVAITGRDILARAKNGTGKT-AAFVIPTLEKVKPKLNKIQALIMVP 77 (206)
T ss_dssp CGGGGCCCHHHHHHHHH---TTCCSCCHHHHHHHHHHHHTCCEEEECCTTSCHH-HHHHHHHHHHCCTTSCSCCEEEECS
T ss_pred ChHHcCCCHHHHHHHHH---CCCCCCCHHHHHHHHHHHcCCCEEEecCCcchhh-hhhccccccccccccccccceeecc
Q ss_pred ccchhhHHHHHhhhhhhhcccccccccccCCCccc-----hhhhhcchHHHHHHHHHHHHHh--cCCeEEEecccccccc
Q psy11254 241 FVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSA-----IVDKYIGESARLIREMFNYARN--HQPCIIFMDEIDAIGG 313 (741)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~G~~~~~v~~~~~~A~~--~~P~ILllDEid~l~~ 313 (741)
..............-....-.......+....... ......=+.+.++...+..-.. .+-..+++||+|.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~Ili~TP~~l~~~l~~~~~~l~~l~~lV~DEaD~l-- 155 (206)
T d1s2ma1 78 TRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKM-- 155 (206)
T ss_dssp SHHHHHHHHHHHHHHTTTTTCCEEEECSSSCHHHHHHHTTSCCSEEEECHHHHHHHHHTTCSCCTTCCEEEEESHHHH--
T ss_pred chhhhhhhhhhhhhcccccCeeEEeecCccchhhHHHHhcccceEEEECCcccccccccceeecccceEEEeechhhh--
Q ss_pred ccCCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEee
Q psy11254 314 RRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMAT 352 (741)
Q Consensus 314 ~~~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at 352 (741)
+|......+..++..+.. ...+.++-||
T Consensus 156 --------~~~~f~~~v~~I~~~l~~---~~Q~il~SAT 183 (206)
T d1s2ma1 156 --------LSRDFKTIIEQILSFLPP---THQSLLFSAT 183 (206)
T ss_dssp --------SSHHHHHHHHHHHTTSCS---SCEEEEEESC
T ss_pred --------hhhhhHHHHHHHHHhCCC---CCEEEEEEEe
No 423
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.50 E-value=0.14 Score=45.32 Aligned_cols=21 Identities=24% Similarity=0.281 Sum_probs=19.0
Q ss_pred ceEEEcCCCCChHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVAS 546 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~ 546 (741)
++++.|.+|+|||+|+..+.+
T Consensus 2 Kv~vvG~~~vGKTsLi~r~~~ 22 (164)
T d1yzqa1 2 KLVFLGEQSVGKTSLITRFMY 22 (164)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 489999999999999998875
No 424
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.47 E-value=0.15 Score=45.69 Aligned_cols=22 Identities=27% Similarity=0.456 Sum_probs=19.3
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
+++++|++|+|||+++..+...
T Consensus 8 KI~vvG~~~vGKSSli~~~~~~ 29 (174)
T d1wmsa_ 8 KVILLGDGGVGKSSLMNRYVTN 29 (174)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 5899999999999999887753
No 425
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.42 E-value=0.14 Score=45.84 Aligned_cols=21 Identities=33% Similarity=0.490 Sum_probs=18.9
Q ss_pred ceEEEcCCCCChHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVAS 546 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~ 546 (741)
++++.|.+|+|||+++..+..
T Consensus 7 KI~lvG~~~vGKTsll~~~~~ 27 (174)
T d2bmea1 7 KFLVIGNAGTGKSCLLHQFIE 27 (174)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 489999999999999998775
No 426
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.20 E-value=0.16 Score=45.14 Aligned_cols=21 Identities=24% Similarity=0.374 Sum_probs=19.1
Q ss_pred ceEEEcCCCCChHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVAS 546 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~ 546 (741)
+++++|.+|+|||+|+..+.+
T Consensus 6 Ki~lvG~~~vGKTsli~rl~~ 26 (167)
T d1z0ja1 6 KVCLLGDTGVGKSSIMWRFVE 26 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 589999999999999998875
No 427
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.18 E-value=0.15 Score=45.70 Aligned_cols=22 Identities=23% Similarity=0.330 Sum_probs=19.5
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
+++++|.+|+|||+|+..+.+.
T Consensus 8 Kv~lvG~~~vGKTsLi~r~~~~ 29 (173)
T d2fn4a1 8 KLVVVGGGGVGKSALTIQFIQS 29 (173)
T ss_dssp EEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5999999999999999887753
No 428
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=87.11 E-value=0.16 Score=45.88 Aligned_cols=25 Identities=24% Similarity=0.392 Sum_probs=21.4
Q ss_pred CCCceEEEcCCCCChHHHHHHHHHH
Q psy11254 523 PPKGCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 523 ~~~~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
.+-+|+++|.+|+|||||+.++.+.
T Consensus 7 ~~~kV~iiG~~~~GKSTLin~l~~~ 31 (186)
T d1mkya2 7 DAIKVAIVGRPNVGKSTLFNAILNK 31 (186)
T ss_dssp SCEEEEEECSTTSSHHHHHHHHHTS
T ss_pred CCCEEEEECCCCCCHHHHHHHHHCC
Confidence 3456899999999999999999864
No 429
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=86.75 E-value=0.14 Score=48.19 Aligned_cols=29 Identities=28% Similarity=0.328 Sum_probs=22.9
Q ss_pred CCceEEEcCCCCChHHHHHHHHHHhCccE
Q psy11254 524 PKGCLLYGPPGTGKTLLARAVASQLDANF 552 (741)
Q Consensus 524 ~~~~ll~G~~G~GKt~l~~~~a~~~~~~~ 552 (741)
++..+|.|++|+|||||+.+|........
T Consensus 95 ~kt~~~~G~SGVGKSTLiN~L~~~~~~~T 123 (225)
T d1u0la2 95 GKISTMAGLSGVGKSSLLNAINPGLKLRV 123 (225)
T ss_dssp SSEEEEECSTTSSHHHHHHHHSTTCCCC-
T ss_pred CCeEEEECCCCCCHHHHHHhhcchhhhhc
Confidence 34579999999999999999977655443
No 430
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.72 E-value=0.17 Score=45.06 Aligned_cols=21 Identities=33% Similarity=0.457 Sum_probs=18.9
Q ss_pred ceEEEcCCCCChHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVAS 546 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~ 546 (741)
+++++|++|+|||+++..+.+
T Consensus 8 Ki~vvG~~~vGKTsli~~~~~ 28 (170)
T d2g6ba1 8 KVMLVGDSGVGKTCLLVRFKD 28 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 489999999999999998765
No 431
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=86.70 E-value=0.17 Score=45.00 Aligned_cols=22 Identities=23% Similarity=0.342 Sum_probs=19.2
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
++++.|.+|+|||+|+..+.+.
T Consensus 5 Ki~vvG~~~vGKTsLi~~~~~~ 26 (170)
T d1ek0a_ 5 KLVLLGEAAVGKSSIVLRFVSN 26 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5899999999999999987753
No 432
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.62 E-value=0.16 Score=45.53 Aligned_cols=23 Identities=26% Similarity=0.286 Sum_probs=20.1
Q ss_pred CceEEEcCCCCChHHHHHHHHHH
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
.++++.|++|+|||+|+..+.+.
T Consensus 3 ~KivvvG~~~vGKTsLi~~~~~~ 25 (177)
T d1kmqa_ 3 KKLVIVGDGACGKTCLLIVNSKD 25 (177)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCcCHHHHHHHHHhC
Confidence 46899999999999999888764
No 433
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=86.46 E-value=0.19 Score=49.58 Aligned_cols=23 Identities=26% Similarity=0.352 Sum_probs=16.7
Q ss_pred CceEEEcCCCCChHHH-HHHHHHH
Q psy11254 525 KGCLLYGPPGTGKTLL-ARAVASQ 547 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l-~~~~a~~ 547 (741)
..+++.|+|||||||+ +..++..
T Consensus 25 g~~lV~g~aGSGKTt~l~~ri~~l 48 (318)
T d1pjra1 25 GPLLIMAGAGSGKTRVLTHRIAYL 48 (318)
T ss_dssp SCEEEEECTTSCHHHHHHHHHHHH
T ss_pred CCEEEEecCCccHHHHHHHHHHHH
Confidence 4589999999999975 4444433
No 434
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=86.33 E-value=0.17 Score=46.28 Aligned_cols=22 Identities=32% Similarity=0.452 Sum_probs=19.3
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
++++.|++|+|||+|+..+.+.
T Consensus 8 KivvvG~~~vGKTsli~~l~~~ 29 (194)
T d2bcgy1 8 KLLLIGNSGVGKSCLLLRFSDD 29 (194)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHhhC
Confidence 4899999999999999988753
No 435
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=86.32 E-value=0.18 Score=44.82 Aligned_cols=21 Identities=24% Similarity=0.401 Sum_probs=19.1
Q ss_pred ceEEEcCCCCChHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVAS 546 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~ 546 (741)
+++++|.+|+|||+|+..+..
T Consensus 6 KivlvG~~~vGKTsli~~~~~ 26 (168)
T d1u8za_ 6 KVIMVGSGGVGKSALTLQFMY 26 (168)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 589999999999999998775
No 436
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.30 E-value=0.16 Score=46.15 Aligned_cols=22 Identities=23% Similarity=0.326 Sum_probs=19.4
Q ss_pred ceEEcCCCChHHHHHHHHHHhc
Q psy11254 208 CLLYGPPGTGKTLLARAVASQL 229 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l 229 (741)
++|+|..|+|||||++.+...-
T Consensus 5 iv~lG~~~vGKTsll~r~~~~~ 26 (200)
T d2bcjq2 5 LLLLGTGESGKSTFIKQMRIIH 26 (200)
T ss_dssp EEEEESTTSSHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 6899999999999999987653
No 437
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=86.25 E-value=0.68 Score=42.83 Aligned_cols=170 Identities=14% Similarity=0.105 Sum_probs=0.0
Q ss_pred CcccccChHHHHHHHHHHhhccCCChHHHhhhCCCCCCC-ceEEcCCCChHHHHHHHHHHhcCCCceeeecccccchhhH
Q psy11254 169 TYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKG-CLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKED 247 (741)
Q Consensus 169 ~~~~i~Gl~~~k~~i~e~i~~~~~~~~~~~~~~l~~~~G-vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~~~~~~ 247 (741)
+|+++ ||.+...+-.....+....+-=-..+..-.... +++..|+|||||...-.-.-.--.....-.....+....+
T Consensus 11 sF~~l-~l~~~l~~~L~~~g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKT~a~~lp~i~~l~~~~~~~~~lil~pt~e 89 (212)
T d1qdea_ 11 KFDDM-ELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQALMLAPTRE 89 (212)
T ss_dssp CGGGG-TCCHHHHHHHHHHTCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHHHHHHHHHHCCTTCCSCCEEEECSSHH
T ss_pred ChhhC-CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCEEeecccccchhhhhHhhhHhhhhccCCCcceEEEcccHH
Q ss_pred HHHHhhhhhhhcccccccccccCCCccchhh--------hhcchHHHHHHHHHHHHHh--cCCeEEEeccccccccccCC
Q psy11254 248 MAILMGNQLKRRSTHHLEKTYFPFYSSAIVD--------KYIGESARLIREMFNYARN--HQPCIIFMDEIDAIGGRRFS 317 (741)
Q Consensus 248 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--------~~~G~~~~~v~~~~~~A~~--~~P~ILllDEid~l~~~~~~ 317 (741)
...-........................... ...=+.+.++...+..-.. .+...+++||+|.+
T Consensus 90 l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IvI~TP~~l~~~~~~~~~~l~~l~~lVlDEad~l------ 163 (212)
T d1qdea_ 90 LALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGLRDAQIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEM------ 163 (212)
T ss_dssp HHHHHHHHHHHHTTTSCCCEEEECC----------CTTCSEEEECHHHHHHHHHTTSSCCTTCCEEEEETHHHH------
T ss_pred HhhhhhhhhcccccccccceeeEeeccchhHHHHHhcCCcEEEECCCccccccccCceecCcceEEeehhhhhh------
Q ss_pred CCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEee
Q psy11254 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMAT 352 (741)
Q Consensus 318 p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at 352 (741)
+|......+..+++.+.. ..++.+.-||
T Consensus 164 ----ld~~f~~~v~~I~~~~~~---~~Q~vl~SAT 191 (212)
T d1qdea_ 164 ----LSSGFKEQIYQIFTLLPP---TTQVVLLSAT 191 (212)
T ss_dssp ----HHTTCHHHHHHHHHHSCT---TCEEEEEESS
T ss_pred ----cccchHHHHHHHHHhCCC---CCeEEEEEee
No 438
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=86.21 E-value=0.13 Score=46.31 Aligned_cols=26 Identities=23% Similarity=0.271 Sum_probs=21.2
Q ss_pred CCCCCceEEEcCCCCChHHHHHHHHH
Q psy11254 521 ITPPKGCLLYGPPGTGKTLLARAVAS 546 (741)
Q Consensus 521 ~~~~~~~ll~G~~G~GKt~l~~~~a~ 546 (741)
-...-+++++|++|+|||||+..+..
T Consensus 14 ~~k~~KI~lvG~~~vGKTsLi~~l~~ 39 (182)
T d1moza_ 14 SNKELRILILGLDGAGKTTILYRLQI 39 (182)
T ss_dssp CSSCEEEEEEEETTSSHHHHHHHTCC
T ss_pred CCceEEEEEECCCCCCHHHHHHHHhc
Confidence 34445799999999999999998754
No 439
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.18 E-value=0.16 Score=45.88 Aligned_cols=23 Identities=26% Similarity=0.430 Sum_probs=20.0
Q ss_pred CceEEEcCCCCChHHHHHHHHHH
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
-+++++|.+|+|||+|+..+.+.
T Consensus 6 iKivviG~~~vGKTsli~~~~~~ 28 (183)
T d1mh1a_ 6 IKCVVVGDGAVGKTCLLISYTTN 28 (183)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHhC
Confidence 36899999999999999887754
No 440
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.01 E-value=0.19 Score=44.48 Aligned_cols=22 Identities=23% Similarity=0.379 Sum_probs=19.5
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
+++++|.+|+|||+|+..+...
T Consensus 5 KivvvG~~~vGKTsli~r~~~~ 26 (167)
T d1c1ya_ 5 KLVVLGSGGVGKSALTVQFVQG 26 (167)
T ss_dssp EEEEECSTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 4899999999999999988754
No 441
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=85.95 E-value=0.073 Score=46.85 Aligned_cols=23 Identities=22% Similarity=0.397 Sum_probs=20.5
Q ss_pred ceEEEcCCCCChHHHHHHHHHHh
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
+++|.|.||+|||||+.++.+.-
T Consensus 2 kI~liG~~n~GKSSLin~l~g~~ 24 (160)
T d1xzpa2 2 RMVIVGKPNVGKSTLLNRLLNED 24 (160)
T ss_dssp EEEEECCHHHHTCHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 47999999999999999998753
No 442
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=85.76 E-value=0.15 Score=52.72 Aligned_cols=22 Identities=18% Similarity=0.371 Sum_probs=20.2
Q ss_pred CceEEcCCCChHHHHHHHHHHh
Q psy11254 207 GCLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 207 GvlL~Gp~GtGKTtL~r~ia~~ 228 (741)
.++++|.||+|||||+++|.|.
T Consensus 58 ~Iai~G~~n~GKSSLiNaL~G~ 79 (400)
T d1tq4a_ 58 NVAVTGETGSGKSSFINTLRGI 79 (400)
T ss_dssp EEEEEECTTSSHHHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4889999999999999999984
No 443
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.61 E-value=0.18 Score=45.10 Aligned_cols=22 Identities=36% Similarity=0.514 Sum_probs=19.5
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
+++|.|.+|+|||+|+..+.+.
T Consensus 5 Kv~lvG~~~vGKTsLi~~~~~~ 26 (172)
T d2g3ya1 5 RVVLIGEQGVGKSTLANIFAGV 26 (172)
T ss_dssp EEEEECCTTSSHHHHHHHHHCC
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5899999999999999988753
No 444
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.35 E-value=1.3 Score=40.64 Aligned_cols=17 Identities=29% Similarity=0.294 Sum_probs=14.7
Q ss_pred CCceEEEcCCCCChHHH
Q psy11254 524 PKGCLLYGPPGTGKTLL 540 (741)
Q Consensus 524 ~~~~ll~G~~G~GKt~l 540 (741)
++.+++..|+|||||..
T Consensus 40 g~dvl~~a~TGsGKTla 56 (206)
T d1veca_ 40 GRDILARAKNGTGKSGA 56 (206)
T ss_dssp TCCEEEECCSSSTTHHH
T ss_pred CCCEEeeccCccccccc
Confidence 46799999999999963
No 445
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=85.35 E-value=1.4 Score=42.38 Aligned_cols=65 Identities=18% Similarity=0.235 Sum_probs=40.3
Q ss_pred CCCCCCceEEEcCCCCChHHHHHHHHHHhC-c-cEEEEechhhhccccchHHHHHHHHHHHHHh---------cCCeEEE
Q psy11254 520 GITPPKGCLLYGPPGTGKTLLARAVASQLD-A-NFLKVVSSAIVDKYIGESARLIREMFNYARN---------HQPCIIF 588 (741)
Q Consensus 520 ~~~~~~~~ll~G~~G~GKt~l~~~~a~~~~-~-~~~~v~~~~l~~~~~g~s~~~i~~~f~~a~~---------~~p~Vl~ 588 (741)
.+..+.++++.|++|+|||+++..++.... . ..+.+- -.+|+..+.+.++++.... ...+|+|
T Consensus 64 pigkGQr~~If~~~g~GKt~l~~~i~~~~~~~~~~v~V~------~~iGer~~ev~~~~~~~~~~~~~~~~~~~~~tvvv 137 (276)
T d2jdid3 64 PYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVF------AGVGERTREGNDLYHEMIESGVINLKDATSKVALV 137 (276)
T ss_dssp CEETTCEEEEEECTTSSHHHHHHHHHHHHTTTCSSEEEE------EEESCCHHHHHHHHHHHHHHTSSCSSSSCCCEEEE
T ss_pred cccCCCEEEeeCCCCCCHHHHHHHHHHHHHhhCCCeEEE------EEeccChHHHHHHHHHHHhcCccccccccceEEEE
Confidence 345567899999999999999888876632 1 122221 1356666666665554432 2346776
Q ss_pred Ec
Q psy11254 589 MD 590 (741)
Q Consensus 589 iD 590 (741)
.-
T Consensus 138 ~~ 139 (276)
T d2jdid3 138 YG 139 (276)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 446
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=85.19 E-value=0.2 Score=44.59 Aligned_cols=23 Identities=22% Similarity=0.296 Sum_probs=20.0
Q ss_pred CceEEEcCCCCChHHHHHHHHHH
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
-++++.|.+|+|||+++..+.+.
T Consensus 5 ~Ki~lvG~~~vGKTsll~~~~~~ 27 (169)
T d1x1ra1 5 YKLVVVGDGGVGKSALTIQFFQK 27 (169)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCcCHHHHHHHHHhC
Confidence 35899999999999999988763
No 447
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=85.12 E-value=0.92 Score=41.65 Aligned_cols=21 Identities=19% Similarity=0.105 Sum_probs=16.3
Q ss_pred CceEEcCCCChHHHHHHHHHH
Q psy11254 207 GCLLYGPPGTGKTLLARAVAS 227 (741)
Q Consensus 207 GvlL~Gp~GtGKTtL~r~ia~ 227 (741)
.+++..|+|+|||+..-..+-
T Consensus 44 d~iv~a~TGsGKT~~~~l~~~ 64 (208)
T d1hv8a1 44 NIVAQARTGSGKTASFAIPLI 64 (208)
T ss_dssp EEEEECCSSSSHHHHHHHHHH
T ss_pred Ceeeechhcccccceeecccc
Confidence 477889999999987755443
No 448
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=85.07 E-value=0.14 Score=45.93 Aligned_cols=21 Identities=33% Similarity=0.423 Sum_probs=9.1
Q ss_pred ceEEEcCCCCChHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVAS 546 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~ 546 (741)
++++.|.+|+|||+|+..+.+
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~ 28 (173)
T d2fu5c1 8 KLLLIGDSGVGKTCVLFRFSE 28 (173)
T ss_dssp EEEEECCCCC-----------
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 489999999999999987765
No 449
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=84.87 E-value=0.22 Score=44.83 Aligned_cols=22 Identities=27% Similarity=0.353 Sum_probs=19.3
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
+++|.|.+|+|||+|+..+...
T Consensus 4 KivliG~~~vGKTsli~r~~~~ 25 (179)
T d1m7ba_ 4 KIVVVGDSQCGKTALLHVFAKD 25 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4799999999999999888763
No 450
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.29 E-value=0.25 Score=44.70 Aligned_cols=22 Identities=32% Similarity=0.513 Sum_probs=19.4
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
+++++|.+|+|||+|+..+.+.
T Consensus 11 Ki~lvG~~~vGKTsLi~r~~~~ 32 (185)
T d2atxa1 11 KCVVVGDGAVGKTCLLMSYAND 32 (185)
T ss_dssp EEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhhC
Confidence 5899999999999999987753
No 451
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=84.24 E-value=0.24 Score=46.56 Aligned_cols=22 Identities=23% Similarity=0.271 Sum_probs=20.2
Q ss_pred ceEEcCCCChHHHHHHHHHHhc
Q psy11254 208 CLLYGPPGTGKTLLARAVASQL 229 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l 229 (741)
|+++|.+++|||||+++|.+..
T Consensus 8 IaIiGh~d~GKSTL~~~L~~~~ 29 (227)
T d1g7sa4 8 VSVLGHVDHGKTTLLDHIRGSA 29 (227)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEeCCCccHHHHHHHHHhhc
Confidence 7899999999999999998764
No 452
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=84.20 E-value=0.19 Score=45.37 Aligned_cols=21 Identities=38% Similarity=0.458 Sum_probs=18.8
Q ss_pred ceEEEcCCCCChHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVAS 546 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~ 546 (741)
.|.|+|+|++|||||+.++.+
T Consensus 3 ~VaiiG~~nvGKSSLin~L~~ 23 (185)
T d1lnza2 3 DVGLVGFPSVGKSTLLSVVSS 23 (185)
T ss_dssp CEEEESSTTSSHHHHHHHSEE
T ss_pred eEEEECCCCCCHHHHHHHHhC
Confidence 478999999999999999864
No 453
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=84.10 E-value=0.24 Score=44.19 Aligned_cols=21 Identities=29% Similarity=0.469 Sum_probs=19.2
Q ss_pred eEEEcCCCCChHHHHHHHHHH
Q psy11254 527 CLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 527 ~ll~G~~G~GKt~l~~~~a~~ 547 (741)
|+|.|.||+|||||..++.+.
T Consensus 8 I~iiG~~nvGKSSLin~L~~~ 28 (179)
T d1egaa1 8 IAIVGRPNVGKSTLLNKLLGQ 28 (179)
T ss_dssp EEEECSSSSSHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 789999999999999999863
No 454
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.92 E-value=0.14 Score=45.76 Aligned_cols=22 Identities=32% Similarity=0.425 Sum_probs=18.0
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
+++++|++|+|||+|+..+.+.
T Consensus 5 Ki~vvG~~~vGKTsli~~~~~~ 26 (170)
T d1i2ma_ 5 KLVLVGDGGTGKTTFVKRHLTG 26 (170)
T ss_dssp EEEEEECTTSSHHHHHHTTC--
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4899999999999999877643
No 455
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=83.71 E-value=0.19 Score=47.31 Aligned_cols=21 Identities=43% Similarity=0.564 Sum_probs=18.8
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
+++.|.-|+|||||++-+...
T Consensus 6 ~iitGFLGaGKTTll~~lL~~ 26 (222)
T d1nija1 6 TLLTGFLGAGKTTLLRHILNE 26 (222)
T ss_dssp EEEEESSSSSCHHHHHHHHHS
T ss_pred EEEeeCCCCCHHHHHHHHHhc
Confidence 579999999999999988875
No 456
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=83.54 E-value=0.86 Score=42.42 Aligned_cols=22 Identities=41% Similarity=0.514 Sum_probs=19.2
Q ss_pred eEEEcCCCCChHHHHHHHHHHh
Q psy11254 527 CLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 527 ~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
.++.|.-|+||||+++.+....
T Consensus 6 ~iitGFLGaGKTTll~~lL~~~ 27 (222)
T d1nija1 6 TLLTGFLGAGKTTLLRHILNEQ 27 (222)
T ss_dssp EEEEESSSSSCHHHHHHHHHSC
T ss_pred EEEeeCCCCCHHHHHHHHHhcC
Confidence 5889999999999999888754
No 457
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.54 E-value=0.27 Score=44.63 Aligned_cols=22 Identities=27% Similarity=0.481 Sum_probs=19.1
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
++++.|++|+|||+|+..+.+.
T Consensus 5 KvvllG~~~vGKTSli~r~~~~ 26 (191)
T d2ngra_ 5 KCVVVGDGAVGKTCLLISYTTN 26 (191)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5899999999999998877654
No 458
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=83.49 E-value=0.24 Score=48.77 Aligned_cols=21 Identities=29% Similarity=0.474 Sum_probs=19.8
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++|+|.|.||||||.+++.+.
T Consensus 13 iGivG~Pn~GKSTlfnalT~~ 33 (296)
T d1ni3a1 13 TGIVGMPNVGKSTFFRAITKS 33 (296)
T ss_dssp EEEEECSSSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHCC
Confidence 889999999999999999975
No 459
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=83.20 E-value=0.3 Score=43.93 Aligned_cols=22 Identities=23% Similarity=0.357 Sum_probs=18.9
Q ss_pred ceEEcCCCChHHHHHHHHHHhc
Q psy11254 208 CLLYGPPGTGKTLLARAVASQL 229 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l 229 (741)
++|+|..|+|||||++-+...-
T Consensus 5 ivllG~~~vGKTsl~~r~~~~~ 26 (195)
T d1svsa1 5 LLLLGAGESGKSTIVKQMKIIH 26 (195)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhhCC
Confidence 6899999999999999876543
No 460
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=82.66 E-value=0.22 Score=44.64 Aligned_cols=22 Identities=32% Similarity=0.400 Sum_probs=19.3
Q ss_pred ceEEEcCCCCChHHHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
.|.|+|.||+|||||+.+|.+.
T Consensus 3 ~VaivG~~nvGKSTLin~L~~~ 24 (180)
T d1udxa2 3 DVGLVGYPNAGKSSLLAAMTRA 24 (180)
T ss_dssp SEEEECCGGGCHHHHHHHHCSS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 3789999999999999998753
No 461
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=82.09 E-value=0.7 Score=42.20 Aligned_cols=23 Identities=30% Similarity=0.303 Sum_probs=20.3
Q ss_pred CceEEcCCCChHHHHHHHHHHhc
Q psy11254 207 GCLLYGPPGTGKTLLARAVASQL 229 (741)
Q Consensus 207 GvlL~Gp~GtGKTtL~r~ia~~l 229 (741)
+++++|-.++|||||+.+|.+.+
T Consensus 5 ni~iiGHvd~GKSTL~~~l~~~~ 27 (196)
T d1d2ea3 5 NVGTIGHVDHGKTTLTAAITKIL 27 (196)
T ss_dssp EEEEESSTTSSHHHHHHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHHHHHHH
Confidence 47899999999999999998754
No 462
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=81.97 E-value=0.25 Score=48.99 Aligned_cols=21 Identities=24% Similarity=0.290 Sum_probs=18.8
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++|+|.|.||||||.+++.+.
T Consensus 3 v~lvG~pn~GKStlfn~lt~~ 23 (319)
T d1wxqa1 3 IGVVGKPNVGKSTFFSAATLV 23 (319)
T ss_dssp EEEEECTTSSHHHHHHHHHC-
T ss_pred EeEECCCCCCHHHHHHHHHCC
Confidence 579999999999999999874
No 463
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=81.70 E-value=0.48 Score=48.79 Aligned_cols=34 Identities=32% Similarity=0.478 Sum_probs=24.4
Q ss_pred CCceEEEcCCCCChHHHHHHHHHHh---CccEEEEec
Q psy11254 524 PKGCLLYGPPGTGKTLLARAVASQL---DANFLKVVS 557 (741)
Q Consensus 524 ~~~~ll~G~~G~GKt~l~~~~a~~~---~~~~~~v~~ 557 (741)
.++++++|++|+|||++++.+...+ +.+++.+++
T Consensus 50 ~~H~~I~G~tGsGKT~~l~~li~~~~~~g~~~iiiD~ 86 (433)
T d1e9ra_ 50 PRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDP 86 (433)
T ss_dssp GGCEEEEECTTSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cceEEEEeCCCCcHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 3679999999999999887555433 445555544
No 464
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=81.65 E-value=0.3 Score=48.77 Aligned_cols=25 Identities=32% Similarity=0.375 Sum_probs=21.9
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCC
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDAN 232 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~ 232 (741)
|.+-|+-|+||||+++.|+..++..
T Consensus 9 I~iEG~iGsGKSTl~~~L~~~l~~~ 33 (333)
T d1p6xa_ 9 IYLDGVYGIGKSTTGRVMASAASGG 33 (333)
T ss_dssp EEEECSTTSSHHHHHHHHHSGGGCS
T ss_pred EEEECCccCCHHHHHHHHHHHhccC
Confidence 5588999999999999999988654
No 465
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=81.60 E-value=0.12 Score=48.94 Aligned_cols=29 Identities=28% Similarity=0.437 Sum_probs=20.1
Q ss_pred CCceEEEcCCCCChHHHHHHHHHHhCccE
Q psy11254 524 PKGCLLYGPPGTGKTLLARAVASQLDANF 552 (741)
Q Consensus 524 ~~~~ll~G~~G~GKt~l~~~~a~~~~~~~ 552 (741)
++..+|.|++|+|||||+.++........
T Consensus 97 ~~~~vl~G~SGVGKSSLiN~L~~~~~~~t 125 (231)
T d1t9ha2 97 DKTTVFAGQSGVGKSSLLNAISPELGLRT 125 (231)
T ss_dssp TSEEEEEESHHHHHHHHHHHHCC------
T ss_pred cceEEEECCCCccHHHHHHhhccHhHhhh
Confidence 34568999999999999999987654443
No 466
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=81.58 E-value=0.28 Score=47.84 Aligned_cols=105 Identities=15% Similarity=0.103 Sum_probs=0.0
Q ss_pred CCCCCCceEEcCCCChHHH--HHHHHHHhcCCCceeeecccccchhhHHHHHhhhhhhhcccccccccccCCCccchhhh
Q psy11254 202 ITPPKGCLLYGPPGTGKTL--LARAVASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDK 279 (741)
Q Consensus 202 l~~~~GvlL~Gp~GtGKTt--L~r~ia~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 279 (741)
+.-.+.+++.+|+|+|||+ +..++...+.....-+.......-..++................+... .....-
T Consensus 6 ~~~~~~~lv~~~TGsGKT~~~l~~~~~~~~~~~~~~lvi~Ptr~La~q~~~~l~~~~~~~~~~~~~~~~-----~~~~~i 80 (305)
T d2bmfa2 6 FRKKRLTIMDLHPGAGKTKRYLPAIVREAIKRGLRTLILAPTRVVAAEMEEALRGLPIRYQTPAIRAEH-----TGREIV 80 (305)
T ss_dssp SSTTCEEEECCCTTSSTTTTHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHHTTTSCCBCCC-------------CCCSE
T ss_pred hhcCCcEEEEECCCCCHHHHHHHHHHHHHHhcCCEEEEEccHHHHHHHHHHHHhcCCcceeeeEEeecc-----cCcccc
Q ss_pred hcchHHHHHHHHHHHHHhcCCeEEEecccccc
Q psy11254 280 YIGESARLIREMFNYARNHQPCIIFMDEIDAI 311 (741)
Q Consensus 280 ~~G~~~~~v~~~~~~A~~~~P~ILllDEid~l 311 (741)
.+.-........+......+-+++++||+|.+
T Consensus 81 ~~~t~~~l~~~~~~~~~~~~~~~vViDE~H~~ 112 (305)
T d2bmfa2 81 DLMCHATFTMRLLSPIRVPNYNLIIMDEAHFT 112 (305)
T ss_dssp EEEEHHHHHHHHTSSSCCCCCSEEEEESTTCC
T ss_pred ccCCcHHHHHHHhcCccccceeEEEeeeeeec
No 467
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=81.35 E-value=0.45 Score=46.26 Aligned_cols=29 Identities=31% Similarity=0.529 Sum_probs=24.7
Q ss_pred CCCCCCceEEEcCCCCChHHHHHHHHHHh
Q psy11254 520 GITPPKGCLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 520 ~~~~~~~~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
.+..+.++++.|++|+|||+++..++...
T Consensus 39 PigrGQr~~I~g~~g~GKT~l~~~i~~~~ 67 (289)
T d1xpua3 39 PIGRGQRGLIVAPPKAGKTMLLQNIAQSI 67 (289)
T ss_dssp CCBTTCEEEEEECSSSSHHHHHHHHHHHH
T ss_pred cccCCCeeeEeCCCCCCHHHHHHHHHHHH
Confidence 35567789999999999999999888755
No 468
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=81.05 E-value=0.36 Score=43.71 Aligned_cols=20 Identities=25% Similarity=0.436 Sum_probs=18.2
Q ss_pred ceEEEcCCCCChHHHHHHHH
Q psy11254 526 GCLLYGPPGTGKTLLARAVA 545 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a 545 (741)
++++.|.+|+|||+++..+.
T Consensus 4 KivllG~~~vGKTsll~r~~ 23 (200)
T d1zcba2 4 KILLLGAGESGKSTFLKQMR 23 (200)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHh
Confidence 58999999999999999884
No 469
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=81.02 E-value=0.33 Score=46.88 Aligned_cols=25 Identities=32% Similarity=0.462 Sum_probs=21.3
Q ss_pred CCceEEcCCCChHHHHHHHHHHhcC
Q psy11254 206 KGCLLYGPPGTGKTLLARAVASQLD 230 (741)
Q Consensus 206 ~GvlL~Gp~GtGKTtL~r~ia~~l~ 230 (741)
++++++|..|+|||||+.+|....+
T Consensus 3 RNv~iiGh~~~GKTtL~e~ll~~~g 27 (267)
T d2dy1a2 3 RTVALVGHAGSGKTTLTEALLYKTG 27 (267)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHTT
T ss_pred eEEEEEcCCCCcHHHHHHHHHHHcC
Confidence 4578999999999999999976554
No 470
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.28 E-value=0.46 Score=42.51 Aligned_cols=24 Identities=17% Similarity=0.130 Sum_probs=20.5
Q ss_pred CceEEEcCCCCChHHHHHHHHHHh
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
-++++.|++|+|||+|+..+.+.-
T Consensus 6 ~ki~vlG~~~vGKTsLi~~~~~~~ 29 (175)
T d2bmja1 6 LRLGVLGDARSGKSSLIHRFLTGS 29 (175)
T ss_dssp EEEEEECCTTTTHHHHHHHHHHSC
T ss_pred EEEEEECCCCCCHHHHHHHHHhCC
Confidence 468999999999999999877643
No 471
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=79.67 E-value=0.77 Score=42.14 Aligned_cols=33 Identities=36% Similarity=0.406 Sum_probs=26.1
Q ss_pred CceEEEcCCCCChHHHHHHHHHHhCccEEEEec
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQLDANFLKVVS 557 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~~~~~~~v~~ 557 (741)
.+.++..|+|+|||.++-.++..++.+.+.+.+
T Consensus 86 ~~~ll~~~tG~GKT~~a~~~~~~~~~~~Liv~p 118 (206)
T d2fz4a1 86 KRGCIVLPTGSGKTHVAMAAINELSTPTLIVVP 118 (206)
T ss_dssp SEEEEEESSSTTHHHHHHHHHHHSCSCEEEEES
T ss_pred CCcEEEeCCCCCceehHHhHHHHhcCceeEEEc
Confidence 346788999999999988888888777555544
No 472
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=79.35 E-value=0.37 Score=49.72 Aligned_cols=73 Identities=12% Similarity=0.225 Sum_probs=44.3
Q ss_pred CCeEEEEcccccccCCCCCCCCcccHHHHHHHHHHHHHccCCCCCCCeEEEEeeCCCCCCCcc--------ccCCCCcce
Q psy11254 583 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPA--------LLRPGRLDR 654 (741)
Q Consensus 583 ~p~Vl~iDE~d~~~~~r~~~~~~~~~~~~~~l~~lL~~~~g~~~~~~v~vi~tTn~~~~ld~a--------l~rpgR~d~ 654 (741)
.|..+++||+..+..- ..+.+++.+..+. ++-++++|..+..++.. ++- =+..
T Consensus 276 ~~v~l~lDE~~~~~~~-------------~~l~~~l~~~Rk~----Gv~~~l~~Qs~~ql~~~yg~~~a~~i~~--n~~t 336 (433)
T d1e9ra_ 276 RRLWLFIDELASLEKL-------------ASLADALTKGRKA----GLRVVAGLQSTSQLDDVYGVKEAQTLRA--SFRS 336 (433)
T ss_dssp CCEEEEESCGGGSCBC-------------SSHHHHHHHCTTT----TEEEEEEESCHHHHHHHHCHHHHHHHHT--TCCE
T ss_pred CceEEEechHhhhccc-------------HHHHHHHHHhCCC----CceEEEEeccHHHHHHHHhHHHHHHHHH--hcCc
Confidence 4678999999876421 1255677877655 67788888776655432 332 4556
Q ss_pred EEEcC--CCCHHHHHHHHHHhhc
Q psy11254 655 KIEIP--LPNEQARLEILKIHAG 675 (741)
Q Consensus 655 ~i~~~--~p~~~~r~~i~~~~~~ 675 (741)
.|.|. .+|.+....+=+ .++
T Consensus 337 ~i~~~~~~~d~~tae~~s~-~~G 358 (433)
T d1e9ra_ 337 LVVLGGSRTDPKTNEDMSL-SLG 358 (433)
T ss_dssp EEEEECCTTCHHHHHHHHH-HHC
T ss_pred EEEecCCCCCHHHHHHHHH-HhC
Confidence 66653 456666544443 443
No 473
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=79.03 E-value=0.45 Score=44.32 Aligned_cols=23 Identities=22% Similarity=0.365 Sum_probs=19.5
Q ss_pred CceEEEcCCCCChHHHHHHHHHH
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
-++++.|++|+|||++++.+...
T Consensus 7 ~KilllG~~~vGKTsll~~~~~~ 29 (221)
T d1azta2 7 HRLLLLGAGESGKSTIVKQMRIL 29 (221)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHhcC
Confidence 35899999999999999987543
No 474
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=78.70 E-value=0.45 Score=46.13 Aligned_cols=21 Identities=33% Similarity=0.600 Sum_probs=19.5
Q ss_pred ceEEcCCCChHHHHHHHHHHh
Q psy11254 208 CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++|+|-|.+|||||..++.+.
T Consensus 5 ~GivG~Pn~GKSTlf~~lt~~ 25 (278)
T d1jala1 5 CGIVGLPNVGKSTLFNALTKA 25 (278)
T ss_dssp EEEECCTTSSHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHCC
Confidence 679999999999999999974
No 475
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=78.45 E-value=0.97 Score=43.49 Aligned_cols=27 Identities=33% Similarity=0.407 Sum_probs=22.9
Q ss_pred CCCCceEEEcCCCCChHHHHHHHHHHh
Q psy11254 522 TPPKGCLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 522 ~~~~~~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
+.++-+++.|.-|+||||++.++|..+
T Consensus 6 ~~p~~i~~sGKGGVGKTTvaa~lA~~l 32 (296)
T d1ihua1 6 NIPPYLFFTGKGGVGKTSISCATAIRL 32 (296)
T ss_dssp SCCSEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCcChHHHHHHHHHHHH
Confidence 346778889999999999988888776
No 476
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=78.26 E-value=0.36 Score=48.10 Aligned_cols=25 Identities=28% Similarity=0.319 Sum_probs=22.0
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCC
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDAN 232 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~ 232 (741)
|.+-|+-|+||||+++.|+..+...
T Consensus 8 I~IEG~iGsGKSTl~~~L~~~l~~~ 32 (331)
T d1osna_ 8 IYLDGAYGIGKTTAAEEFLHHFAIT 32 (331)
T ss_dssp EEEEESSSSCTTHHHHHHHHTTTTS
T ss_pred EEEECCCCCCHHHHHHHHHHHHhhc
Confidence 5688999999999999999987654
No 477
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=78.10 E-value=0.5 Score=47.08 Aligned_cols=26 Identities=31% Similarity=0.321 Sum_probs=22.9
Q ss_pred CceEEEcCCCCChHHHHHHHHHHhCc
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQLDA 550 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~~~ 550 (741)
-+|.|-|+-|+||||+++.+++.++.
T Consensus 7 ~rI~iEG~iGsGKSTl~~~L~~~l~~ 32 (333)
T d1p6xa_ 7 VRIYLDGVYGIGKSTTGRVMASAASG 32 (333)
T ss_dssp EEEEEECSTTSSHHHHHHHHHSGGGC
T ss_pred EEEEEECCccCCHHHHHHHHHHHhcc
Confidence 35789999999999999999998853
No 478
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=77.94 E-value=1.4 Score=40.24 Aligned_cols=21 Identities=19% Similarity=0.101 Sum_probs=16.5
Q ss_pred CceEEEcCCCCChHHHHHHHH
Q psy11254 525 KGCLLYGPPGTGKTLLARAVA 545 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a 545 (741)
..+++..|+|+|||+.+-...
T Consensus 43 ~d~iv~a~TGsGKT~~~~l~~ 63 (208)
T d1hv8a1 43 YNIVAQARTGSGKTASFAIPL 63 (208)
T ss_dssp SEEEEECCSSSSHHHHHHHHH
T ss_pred CCeeeechhcccccceeeccc
Confidence 468889999999998765443
No 479
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=76.42 E-value=0.53 Score=45.58 Aligned_cols=25 Identities=12% Similarity=0.041 Sum_probs=21.4
Q ss_pred CCceEEcCCCChHHHHHHHHHHhcC
Q psy11254 206 KGCLLYGPPGTGKTLLARAVASQLD 230 (741)
Q Consensus 206 ~GvlL~Gp~GtGKTtL~r~ia~~l~ 230 (741)
+++.++|..|+|||||+.+|.-..+
T Consensus 7 Rni~i~gh~~~GKTtL~e~ll~~~g 31 (276)
T d2bv3a2 7 RNIGIAAHIDAGKTTTTERILYYTG 31 (276)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred eEEEEEeCCCCCHHHHHHHHHHhcC
Confidence 4688999999999999999976554
No 480
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=76.04 E-value=0.72 Score=44.72 Aligned_cols=26 Identities=31% Similarity=0.330 Sum_probs=21.2
Q ss_pred CCCCC--ceEEcCCCChHHHHHHHHHHh
Q psy11254 203 TPPKG--CLLYGPPGTGKTLLARAVASQ 228 (741)
Q Consensus 203 ~~~~G--vlL~Gp~GtGKTtL~r~ia~~ 228 (741)
++.+| +++.|++|+|||+|+..++..
T Consensus 64 pig~GQr~~If~~~g~GKt~ll~~~~~~ 91 (285)
T d2jdia3 64 PIGRGQRELIIGDRQTGKTSIAIDTIIN 91 (285)
T ss_dssp CCBTTCBCEEEESTTSSHHHHHHHHHHH
T ss_pred CccCCCEEEeecCCCCChHHHHHHHHHh
Confidence 55566 899999999999998866643
No 481
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=75.96 E-value=0.47 Score=43.72 Aligned_cols=24 Identities=25% Similarity=0.174 Sum_probs=20.5
Q ss_pred CceEEcCCCChHHHHHHHHHHhcC
Q psy11254 207 GCLLYGPPGTGKTLLARAVASQLD 230 (741)
Q Consensus 207 GvlL~Gp~GtGKTtL~r~ia~~l~ 230 (741)
+++++|-+++|||||+.+|....+
T Consensus 5 ni~iiGhvd~GKSTL~~~Ll~~~g 28 (204)
T d2c78a3 5 NVGTIGHVDHGKTTLTAALTYVAA 28 (204)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHHHHHHhh
Confidence 478999999999999999976543
No 482
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=75.93 E-value=0.38 Score=47.83 Aligned_cols=24 Identities=25% Similarity=0.371 Sum_probs=18.4
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCC
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDA 231 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~ 231 (741)
|.|-|+=|+||||+++.++..+..
T Consensus 7 I~IEG~iGsGKTTl~~~La~~l~~ 30 (329)
T d1e2ka_ 7 VYIDGPHGMGKTTTTQLLVALGSR 30 (329)
T ss_dssp EEECSCTTSSHHHHHHHHTC----
T ss_pred EEEECCcCCCHHHHHHHHHHHhCC
Confidence 567899999999999999987654
No 483
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=74.81 E-value=5.6 Score=33.61 Aligned_cols=20 Identities=35% Similarity=0.439 Sum_probs=16.0
Q ss_pred ceEEcCCCChHHH-HHHHHHH
Q psy11254 208 CLLYGPPGTGKTL-LARAVAS 227 (741)
Q Consensus 208 vlL~Gp~GtGKTt-L~r~ia~ 227 (741)
-+++||=.||||| |++.+-.
T Consensus 5 ~~i~GpMfsGKTteLi~~~~~ 25 (139)
T d2b8ta1 5 EFITGPMFAGKTAELIRRLHR 25 (139)
T ss_dssp EEEECSTTSCHHHHHHHHHHH
T ss_pred EEEEccccCHHHHHHHHHHHH
Confidence 3589999999999 7776644
No 484
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=74.68 E-value=0.66 Score=46.10 Aligned_cols=25 Identities=28% Similarity=0.299 Sum_probs=22.4
Q ss_pred ceEEEcCCCCChHHHHHHHHHHhCc
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQLDA 550 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~~~ 550 (741)
+|.|-|+-|+||||+++.+++.+..
T Consensus 7 rI~IEG~iGsGKSTl~~~L~~~l~~ 31 (331)
T d1osna_ 7 RIYLDGAYGIGKTTAAEEFLHHFAI 31 (331)
T ss_dssp EEEEEESSSSCTTHHHHHHHHTTTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhh
Confidence 4788999999999999999998754
No 485
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=74.60 E-value=0.76 Score=41.21 Aligned_cols=23 Identities=22% Similarity=0.296 Sum_probs=20.1
Q ss_pred ceEEEcCCCCChHHHHHHHHHHh
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
++++.|..|+|||+++..+....
T Consensus 4 Kiv~lG~~~vGKTsll~r~~~~~ 26 (200)
T d2bcjq2 4 KLLLLGTGESGKSTFIKQMRIIH 26 (200)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 58999999999999999887554
No 486
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=74.44 E-value=2.8 Score=40.66 Aligned_cols=69 Identities=14% Similarity=0.210 Sum_probs=48.4
Q ss_pred hhhhhcchHHHHHH--HHHHHHHhcCCeEEEeccccccccccCCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeC
Q psy11254 276 IVDKYIGESARLIR--EMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATN 353 (741)
Q Consensus 276 ~~~~~~G~~~~~v~--~~~~~A~~~~P~ILllDEid~l~~~~~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~ 353 (741)
.+..++++...... ..++......|.++++|| |..++++..+..+.+++..+.. +.-+|++||
T Consensus 221 ~~~~ls~~~~~l~~l~~~~~~~~~~~~~~~~ide----------~e~~L~~~~~~~l~~~l~~~~~-----~~Q~iitTh 285 (329)
T g1xew.1 221 RIEAMSGGEKALTALAFVFAIQKFKPAPFYLFDE----------IDAHLDDANVKRVADLIKESSK-----ESQFIVITL 285 (329)
T ss_dssp EGGGSCHHHHHHHHHHHHHHHHHHSCCSEEEEES----------TTTTSCHHHHHHHHHHHHHHTT-----TSEEEEECC
T ss_pred ehhhhhhHHHHHHHHHHHHHHHhhcccchhhhhh----------HHhhcCHHHHHHHHHHHHHhcc-----CCeEEEEeC
Confidence 34455666544332 222223347888999999 8889999988888888887653 357899999
Q ss_pred CCCCCC
Q psy11254 354 RPDTLD 359 (741)
Q Consensus 354 ~~~~ld 359 (741)
++..++
T Consensus 286 ~~~~~~ 291 (329)
T g1xew.1 286 RDVMMA 291 (329)
T ss_dssp CHHHHH
T ss_pred CHHHHH
Confidence 987664
No 487
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=74.17 E-value=0.52 Score=46.29 Aligned_cols=15 Identities=47% Similarity=0.873 Sum_probs=13.5
Q ss_pred ceEEcCCCChHHHHH
Q psy11254 208 CLLYGPPGTGKTLLA 222 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~ 222 (741)
.++.|.+|||||||.
T Consensus 17 alffGLSGTGKTTLs 31 (318)
T d1j3ba1 17 AVFFGLSGTGKTTLS 31 (318)
T ss_dssp EEEEECTTSCHHHHT
T ss_pred EEEEccCCCCccccc
Confidence 679999999999975
No 488
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=73.91 E-value=0.81 Score=44.10 Aligned_cols=27 Identities=33% Similarity=0.407 Sum_probs=22.8
Q ss_pred CCCCCceEEcCCCChHHHHHHHHHHhc
Q psy11254 203 TPPKGCLLYGPPGTGKTLLARAVASQL 229 (741)
Q Consensus 203 ~~~~GvlL~Gp~GtGKTtL~r~ia~~l 229 (741)
..|+-+++.|.-|+||||++-.+|..+
T Consensus 6 ~~p~~i~~sGKGGVGKTTvaa~lA~~l 32 (296)
T d1ihua1 6 NIPPYLFFTGKGGVGKTSISCATAIRL 32 (296)
T ss_dssp SCCSEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCcChHHHHHHHHHHHH
Confidence 345667899999999999999998766
No 489
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=73.89 E-value=0.96 Score=40.82 Aligned_cols=22 Identities=45% Similarity=0.774 Sum_probs=17.2
Q ss_pred CceEEEcCCCCChHHHHHHHHH
Q psy11254 525 KGCLLYGPPGTGKTLLARAVAS 546 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~ 546 (741)
.+.++++|.|+|||.++-.++.
T Consensus 24 ~n~lv~~pTGsGKT~i~~~~~~ 45 (200)
T d1wp9a1 24 TNCLIVLPTGLGKTLIAMMIAE 45 (200)
T ss_dssp SCEEEECCTTSCHHHHHHHHHH
T ss_pred CCeEEEeCCCCcHHHHHHHHHH
Confidence 3578999999999987665553
No 490
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=73.09 E-value=0.91 Score=43.60 Aligned_cols=24 Identities=33% Similarity=0.480 Sum_probs=20.8
Q ss_pred CceEEEcCCCCChHHHHHHHHHHh
Q psy11254 525 KGCLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 525 ~~~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
+++.+.|+.|+|||||+.++....
T Consensus 3 RNv~iiGh~~~GKTtL~e~ll~~~ 26 (267)
T d2dy1a2 3 RTVALVGHAGSGKTTLTEALLYKT 26 (267)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHT
T ss_pred eEEEEEcCCCCcHHHHHHHHHHHc
Confidence 568999999999999999996544
No 491
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=73.05 E-value=2 Score=40.16 Aligned_cols=44 Identities=20% Similarity=0.197 Sum_probs=28.7
Q ss_pred HhcCCCCCCceEEEcCCCCChHHHHHHHHHH-h--CccEEEEechhh
Q psy11254 517 QRVGITPPKGCLLYGPPGTGKTLLARAVASQ-L--DANFLKVVSSAI 560 (741)
Q Consensus 517 ~~~~~~~~~~~ll~G~~G~GKt~l~~~~a~~-~--~~~~~~v~~~~l 560 (741)
.++.-+.+...||+|..|||||.++-..+.. + +...+.+.+...
T Consensus 69 ~~~~~~~~~~~LL~GdvGsGKT~V~~~a~~~~~~~g~qv~~l~Pt~~ 115 (233)
T d2eyqa3 69 SDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTL 115 (233)
T ss_dssp HHHHSSSCCEEEEECCCCTTTHHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred HHHhccCccCeEEEcCCCCCcHHHHHHHHHHHHHcCCceEEEccHHH
Confidence 3444455667899999999999876544433 2 555665555544
No 492
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=72.45 E-value=8.8 Score=33.10 Aligned_cols=46 Identities=13% Similarity=0.150 Sum_probs=27.9
Q ss_pred hcCCeEEEeccccccccccCCCCCCccHHHHHHHHHHHHhccCCCCCCCeEEEEeeCCC
Q psy11254 297 NHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRP 355 (741)
Q Consensus 297 ~~~P~ILllDEid~l~~~~~~p~~~lD~~~~~~l~~lL~~l~~~~~~~~v~vI~at~~~ 355 (741)
....++|+|||+-....-. =++. ..+.++|..- ..++-+|+|.+++
T Consensus 92 ~~~~dllILDEi~~Ai~~g-----li~~---~~v~~ll~~r-----p~~~evVlTGr~~ 137 (157)
T d1g5ta_ 92 DPLLDMVVLDELTYMVAYD-----YLPL---EEVISALNAR-----PGHQTVIITGRGC 137 (157)
T ss_dssp CTTCSEEEEETHHHHHHTT-----SSCH---HHHHHHHHTS-----CTTCEEEEECSSC
T ss_pred cCccCEEeHHHHHHHHHcC-----CCCH---HHHHHHHHhC-----CCCCEEEEECCCC
Confidence 3568999999975544321 1232 3455666542 2466899998754
No 493
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=72.34 E-value=1.5 Score=39.19 Aligned_cols=105 Identities=18% Similarity=0.143 Sum_probs=0.0
Q ss_pred ceEEcCCCChHHHHHHHHHHhcCCCceeeecccccchhhHHHHHhhhhhhhcccccccccccCCCccchhhhhcchHHHH
Q psy11254 208 CLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARL 287 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~r~ia~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~G~~~~~ 287 (741)
++++|+..+|||..|..++...++...--+. .-+-.++.++
T Consensus 2 iLVtGGarSGKS~~AE~l~~~~~~~~YiAT~---------------------------------------~~~D~em~~R 42 (180)
T d1c9ka_ 2 ILVTGGARSGKSRHAEALIGDAPQVLYIATS---------------------------------------QILDDEMAAR 42 (180)
T ss_dssp EEEEECTTSSHHHHHHHHHCSCSSEEEEECC---------------------------------------CC------CH
T ss_pred EEEECCCCccHHHHHHHHHhcCCCcEEEEcc---------------------------------------CCCCHHHHHH
Q ss_pred HHHHHHH-------------------HHhcCCeEEEeccccccccccCCCCCCc-----------cHHHHHHHHHHHHhc
Q psy11254 288 IREMFNY-------------------ARNHQPCIIFMDEIDAIGGRRFSEGTSA-----------DREIQRTLMELLNQM 337 (741)
Q Consensus 288 v~~~~~~-------------------A~~~~P~ILllDEid~l~~~~~~p~~~l-----------D~~~~~~l~~lL~~l 337 (741)
+..--.+ .....++++++|=+..+.....-...+. .......+..++..+
T Consensus 43 I~~Hr~rR~~~w~tiE~~~~l~~~l~~~~~~~~~vLlDclt~~l~N~l~~~~~~~~~~~~~~~~~~~~i~~~i~~l~~~l 122 (180)
T d1c9ka_ 43 IQHHKDGRPAHWRTAECWRHLDTLITADLAPDDAILLECITTMVTNLLFALGGENDPEQWDYAAMERAIDDEIQILIAAC 122 (180)
T ss_dssp HHHHHHTSCTTEEEECCSSCGGGTSCTTSCTTCEEEEECHHHHHHHHHHHC----CTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCcCCCEEecccccHHHHHHhhcCcccchhhhhhhHHHHHHHHhcccccchhhhhhhhHHHHHHHHHHHHHHHH
Q ss_pred cCCCCCCCeEEEEeeCCC
Q psy11254 338 DGFDSLGQVKMIMATNRP 355 (741)
Q Consensus 338 ~~~~~~~~v~vI~at~~~ 355 (741)
.. ....+|++||..
T Consensus 123 ~~----~~~~~ViVsnEV 136 (180)
T d1c9ka_ 123 QR----CPAKVVLVTNEV 136 (180)
T ss_dssp HH----CCSEEEEECCCC
T ss_pred Hh----CCCcEEEEeccc
No 494
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=71.89 E-value=0.79 Score=45.44 Aligned_cols=26 Identities=23% Similarity=0.358 Sum_probs=19.9
Q ss_pred ceEEEcCCCCChHHHHHHHHHHhCcc
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQLDAN 551 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~~~~ 551 (741)
+|.|-|+-|+||||+++.+++.++..
T Consensus 6 rI~IEG~iGsGKTTl~~~La~~l~~~ 31 (329)
T d1e2ka_ 6 RVYIDGPHGMGKTTTTQLLVALGSRD 31 (329)
T ss_dssp EEEECSCTTSSHHHHHHHHTC----C
T ss_pred EEEEECCcCCCHHHHHHHHHHHhCCC
Confidence 47889999999999999999887543
No 495
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=71.49 E-value=0.89 Score=41.71 Aligned_cols=24 Identities=25% Similarity=0.156 Sum_probs=20.4
Q ss_pred CCceEEEcCCCCChHHHHHHHHHH
Q psy11254 524 PKGCLLYGPPGTGKTLLARAVASQ 547 (741)
Q Consensus 524 ~~~~ll~G~~G~GKt~l~~~~a~~ 547 (741)
.-++.+.|.+++|||||+.+|...
T Consensus 3 ~ini~iiGhvd~GKSTL~~~Ll~~ 26 (204)
T d2c78a3 3 HVNVGTIGHVDHGKTTLTAALTYV 26 (204)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCcHHHHHHHHHHH
Confidence 357899999999999999998643
No 496
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=71.33 E-value=2.8 Score=42.02 Aligned_cols=15 Identities=40% Similarity=0.720 Sum_probs=13.2
Q ss_pred ceEEcCCCChHHHHH
Q psy11254 208 CLLYGPPGTGKTLLA 222 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~ 222 (741)
++-||+.|+|||..+
T Consensus 128 i~aYGqtGSGKT~Tm 142 (368)
T d2ncda_ 128 IFAYGQTGSGKTYTM 142 (368)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEeeccCCCccceEe
Confidence 789999999999664
No 497
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=71.16 E-value=0.69 Score=45.18 Aligned_cols=15 Identities=47% Similarity=0.873 Sum_probs=13.5
Q ss_pred ceEEcCCCChHHHHH
Q psy11254 208 CLLYGPPGTGKTLLA 222 (741)
Q Consensus 208 vlL~Gp~GtGKTtL~ 222 (741)
.++.|.+|||||||.
T Consensus 17 alfFGLSGTGKTTLs 31 (313)
T d2olra1 17 AVFFGLSGTGKTTLS 31 (313)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEEccCCCCcccce
Confidence 579999999999976
No 498
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=70.51 E-value=2.8 Score=39.83 Aligned_cols=45 Identities=24% Similarity=0.289 Sum_probs=29.0
Q ss_pred hcCCCCCCceEEEcCCCCChHHHHHHHHH---HhCccEEEEechhhhc
Q psy11254 518 RVGITPPKGCLLYGPPGTGKTLLARAVAS---QLDANFLKVVSSAIVD 562 (741)
Q Consensus 518 ~~~~~~~~~~ll~G~~G~GKt~l~~~~a~---~~~~~~~~v~~~~l~~ 562 (741)
++.-..+...||.|..|||||.++-..+. ..+.....+.+.+.+.
T Consensus 98 d~~~~~~m~rLL~GdvGSGKT~Va~~a~~~~~~~g~q~~~m~Pt~~La 145 (264)
T d1gm5a3 98 DMISEKPMNRLLQGDVGSGKTVVAQLAILDNYEAGFQTAFMVPTSILA 145 (264)
T ss_dssp HHHSSSCCCCEEECCSSSSHHHHHHHHHHHHHHHTSCEEEECSCHHHH
T ss_pred HhhccCcceeeeeccccccccHHHHHHHHHHHhcccceeEEeehHhhh
Confidence 34334455679999999999987654443 3356666666655443
No 499
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=70.00 E-value=1.1 Score=39.92 Aligned_cols=23 Identities=22% Similarity=0.326 Sum_probs=19.6
Q ss_pred ceEEEcCCCCChHHHHHHHHHHh
Q psy11254 526 GCLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 526 ~~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
++++.|..|+|||+++..+....
T Consensus 4 KivllG~~~vGKTsl~~r~~~~~ 26 (195)
T d1svsa1 4 KLLLLGAGESGKSTIVKQMKIIH 26 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhhCC
Confidence 58999999999999998876543
No 500
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=69.36 E-value=1.3 Score=41.09 Aligned_cols=22 Identities=23% Similarity=0.271 Sum_probs=19.9
Q ss_pred eEEEcCCCCChHHHHHHHHHHh
Q psy11254 527 CLLYGPPGTGKTLLARAVASQL 548 (741)
Q Consensus 527 ~ll~G~~G~GKt~l~~~~a~~~ 548 (741)
|.+.|.+++|||||+.+|.+..
T Consensus 8 IaIiGh~d~GKSTL~~~L~~~~ 29 (227)
T d1g7sa4 8 VSVLGHVDHGKTTLLDHIRGSA 29 (227)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEeCCCccHHHHHHHHHhhc
Confidence 8999999999999999998754
Done!