Your job contains 1 sequence.
>psy11254
MTTPVVDEVRHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQ
HDLLLHCVREQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVG
CRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQI
RELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSL
FVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQP
CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDP
ALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLR
NVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQ
EDFMKAVRKVSDNKKLESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLL
ARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRF
SEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPL
PNEQARLEILKIHAGPIAKHGEIGDAATKWVLPFTAGGFIYIATVSVIPELLEDTSPKQT
VKEILALLLGVFMMVIIATFE
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11254
(741 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1NCS8 - symbol:PSMC6 "Uncharacterized protein"... 858 6.0e-159 2
UNIPROTKB|Q5ZKX2 - symbol:PSMC6 "Uncharacterized protein"... 858 6.0e-159 2
ZFIN|ZDB-GENE-030131-304 - symbol:psmc6 "proteasome (pros... 852 1.6e-158 2
UNIPROTKB|J9P1N0 - symbol:PSMC6 "Uncharacterized protein"... 858 2.0e-158 2
UNIPROTKB|F1SFE6 - symbol:PSMC6 "Uncharacterized protein"... 858 2.0e-158 2
RGD|2318218 - symbol:LOC100365869 "proteasome (prosome, m... 858 2.0e-158 2
UNIPROTKB|F1MLV1 - symbol:PSMC6 "26S protease regulatory ... 858 2.0e-158 2
UNIPROTKB|P62333 - symbol:PSMC6 "26S protease regulatory ... 858 2.0e-158 2
UNIPROTKB|P62335 - symbol:PSMC6 "26S protease regulatory ... 858 2.0e-158 2
MGI|MGI:1914339 - symbol:Psmc6 "proteasome (prosome, macr... 858 2.0e-158 2
RGD|1308825 - symbol:Psmc6 "proteasome (prosome, macropai... 858 5.4e-158 2
UNIPROTKB|Q2KIW6 - symbol:PSMC6 "26S protease regulatory ... 858 1.1e-157 2
TAIR|locus:2028200 - symbol:AT1G45000 species:3702 "Arabi... 834 5.4e-145 2
UNIPROTKB|Q9FXT8 - symbol:OsRPT4 "Os02g0199900 protein" s... 832 1.1e-144 2
ASPGD|ASPL0000032311 - symbol:AN5747 species:162425 "Emer... 781 1.4e-133 2
POMBASE|SPCC1682.16 - symbol:rpt4 "19S proteasome regulat... 787 2.6e-132 2
DICTYBASE|DDB_G0284517 - symbol:psmC6 "26S protease regul... 789 2.0e-130 2
SGD|S000005785 - symbol:RPT4 "ATPase of the 19S regulator... 754 3.4e-128 2
GENEDB_PFALCIPARUM|PF13_0033 - symbol:PF13_0033 "26S prot... 753 3.1e-125 2
UNIPROTKB|Q8IEQ1 - symbol:PF13_0033 "26S proteasome regul... 753 3.1e-125 2
FB|FBgn0028685 - symbol:Rpt4 "Regulatory particle triple-... 882 1.3e-109 2
UNIPROTKB|H0YJC0 - symbol:PSMC6 "26S protease regulatory ... 747 1.9e-104 3
WB|WBGene00004504 - symbol:rpt-4 species:6239 "Caenorhabd... 853 7.5e-101 2
UNIPROTKB|O17071 - symbol:rpt-4 "Probable 26S protease re... 853 7.5e-101 2
FB|FBgn0036224 - symbol:Rpt4R "Regulatory particle triple... 844 2.9e-99 2
TAIR|locus:2159996 - symbol:RPT4A "regulatory particle tr... 834 7.7e-97 2
CGD|CAL0005827 - symbol:RPT4 species:5476 "Candida albica... 753 1.2e-87 2
UNIPROTKB|E2RC37 - symbol:SPATA5 "Uncharacterized protein... 655 1.5e-87 2
POMBASE|SPBC56F2.07c - symbol:SPBC56F2.07c "ribosome biog... 671 1.9e-87 2
TAIR|locus:2085064 - symbol:CDC48 "cell division cycle 48... 673 3.1e-87 2
TAIR|locus:2101933 - symbol:AtCDC48B "AT3G53230" species:... 674 8.1e-87 2
TAIR|locus:2831844 - symbol:AtCDC48C "cell division cycle... 673 8.1e-87 2
SGD|S000002284 - symbol:CDC48 "AAA ATPase involved in mul... 668 1.0e-86 2
CGD|CAL0000732 - symbol:CDC48 species:5476 "Candida albic... 663 4.4e-86 2
UNIPROTKB|Q59WG3 - symbol:CDC48 "Putative uncharacterized... 663 4.4e-86 2
MGI|MGI:1927170 - symbol:Spata5 "spermatogenesis associat... 651 1.2e-85 2
UNIPROTKB|F1SIH8 - symbol:VCP "Transitional endoplasmic r... 656 2.4e-85 2
POMBASE|SPAC1565.08 - symbol:cdc48 "AAA family ATPase Cdc... 657 4.0e-85 2
DICTYBASE|DDB_G0288065 - symbol:cdcD "CDC48 family AAA AT... 657 6.4e-85 2
UNIPROTKB|Q6GL04 - symbol:vcp "Transitional endoplasmic r... 650 1.0e-84 2
ZFIN|ZDB-GENE-030131-5408 - symbol:vcp "valosin containin... 647 1.3e-84 2
UNIPROTKB|P23787 - symbol:vcp "Transitional endoplasmic r... 648 1.7e-84 2
UNIPROTKB|Q8NB90 - symbol:SPATA5 "Spermatogenesis-associa... 637 1.7e-84 2
UNIPROTKB|P55072 - symbol:VCP "Transitional endoplasmic r... 647 2.2e-84 2
MGI|MGI:99919 - symbol:Vcp "valosin containing protein" s... 647 2.2e-84 2
RGD|621595 - symbol:Vcp "valosin-containing protein" spec... 647 2.2e-84 2
UNIPROTKB|G3X757 - symbol:VCP "Transitional endoplasmic r... 647 2.2e-84 2
UNIPROTKB|Q3ZBT1 - symbol:VCP "Transitional endoplasmic r... 647 2.2e-84 2
UNIPROTKB|E2RLQ9 - symbol:VCP "Uncharacterized protein" s... 647 2.2e-84 2
UNIPROTKB|P03974 - symbol:VCP "Transitional endoplasmic r... 647 2.2e-84 2
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 642 2.8e-84 2
FB|FBgn0028687 - symbol:Rpt1 "Regulatory particle triple-... 595 5.7e-84 2
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer... 640 1.2e-83 2
SGD|S000004389 - symbol:AFG2 "ATPase of the CDC48/PAS1/SE... 654 1.5e-83 2
FB|FBgn0261014 - symbol:TER94 "TER94" species:7227 "Droso... 641 1.5e-83 2
UNIPROTKB|F1P4V8 - symbol:LOC426240 "Uncharacterized prot... 637 2.5e-83 2
TAIR|locus:2024822 - symbol:RPT1A "regulatory particle tr... 601 6.6e-83 2
CGD|CAL0005689 - symbol:RPT1 species:5476 "Candida albica... 585 8.5e-83 2
RGD|3428 - symbol:Psmc2 "proteasome (prosome, macropain) ... 591 1.1e-82 2
UNIPROTKB|Q63347 - symbol:Psmc2 "26S protease regulatory ... 591 1.1e-82 2
WB|WBGene00007352 - symbol:cdc-48.1 species:6239 "Caenorh... 619 1.3e-82 2
UNIPROTKB|P54811 - symbol:cdc-48.1 "Transitional endoplas... 619 1.3e-82 2
UNIPROTKB|P46472 - symbol:psmc2 "26S protease regulatory ... 594 1.4e-82 2
UNIPROTKB|Q5R8D7 - symbol:PSMC2 "26S protease regulatory ... 598 1.7e-82 2
ZFIN|ZDB-GENE-040426-1327 - symbol:psmc2 "proteasome (pro... 594 1.8e-82 2
MGI|MGI:109555 - symbol:Psmc2 "proteasome (prosome, macro... 594 3.7e-82 2
UNIPROTKB|Q5E9F9 - symbol:PSMC2 "26S protease regulatory ... 594 4.7e-82 2
UNIPROTKB|F1PPH7 - symbol:PSMC2 "Uncharacterized protein"... 594 4.7e-82 2
UNIPROTKB|P35998 - symbol:PSMC2 "26S protease regulatory ... 594 4.7e-82 2
UNIPROTKB|F1SB53 - symbol:PSMC2 "Uncharacterized protein"... 594 4.7e-82 2
UNIPROTKB|Q4R4R0 - symbol:PSMC2 "26S protease regulatory ... 594 4.7e-82 2
UNIPROTKB|F1NFL8 - symbol:PSMC2 "Uncharacterized protein"... 594 6.0e-82 2
UNIPROTKB|E1C4V5 - symbol:PSMC2 "Uncharacterized protein"... 594 9.8e-82 2
GENEDB_PFALCIPARUM|PFF0940c - symbol:PFF0940c "cell divis... 628 1.2e-81 2
UNIPROTKB|C6KT34 - symbol:PFF0940c "Cell division cycle p... 628 1.2e-81 2
WB|WBGene00004501 - symbol:rpt-1 species:6239 "Caenorhabd... 593 1.4e-81 2
UNIPROTKB|Q18787 - symbol:rpt-1 "26S protease regulatory ... 593 1.4e-81 2
WB|WBGene00008053 - symbol:cdc-48.2 species:6239 "Caenorh... 614 1.9e-81 2
UNIPROTKB|P54812 - symbol:cdc-48.2 "Transitional endoplas... 614 1.9e-81 2
TAIR|locus:2147685 - symbol:AT5G20000 species:3702 "Arabi... 570 2.5e-81 2
CGD|CAL0002187 - symbol:orf19.6432 species:5476 "Candida ... 622 4.0e-81 2
UNIPROTKB|I3LJ30 - symbol:I3LJ30 "Uncharacterized protein... 594 4.2e-81 2
SGD|S000001628 - symbol:RPT1 "ATPase of the 19S regulator... 582 4.5e-81 2
ZFIN|ZDB-GENE-060312-22 - symbol:zgc:136908 "zgc:136908" ... 611 5.1e-81 2
POMBASE|SPBC16C6.07c - symbol:rpt1 "19S proteasome regula... 582 8.9e-81 2
DICTYBASE|DDB_G0276917 - symbol:psmC2 "26S proteasome ATP... 591 1.4e-80 2
TAIR|locus:2147670 - symbol:RPT6A "regulatory particle tr... 572 2.2e-80 2
UNIPROTKB|Q4RG45 - symbol:GSTENG00035021001 "Chromosome 2... 580 5.6e-80 2
ZFIN|ZDB-GENE-030131-6547 - symbol:psmc5 "proteasome (pro... 580 7.1e-80 2
WB|WBGene00004506 - symbol:rpt-6 species:6239 "Caenorhabd... 562 8.1e-80 2
FB|FBgn0020369 - symbol:Rpt6 "Regulatory particle triple-... 581 1.2e-79 2
UNIPROTKB|F1NU79 - symbol:PSMC5 "Uncharacterized protein"... 580 1.5e-79 2
UNIPROTKB|Q6AZU7 - symbol:Q6AZU7 "Putative uncharacterize... 580 1.5e-79 2
UNIPROTKB|Q6P380 - symbol:psmc5 "Putative uncharacterized... 580 1.5e-79 2
UNIPROTKB|P62194 - symbol:PSMC5 "26S protease regulatory ... 580 2.4e-79 2
UNIPROTKB|P62195 - symbol:PSMC5 "26S protease regulatory ... 580 2.4e-79 2
UNIPROTKB|P62197 - symbol:PSMC5 "26S protease regulatory ... 580 2.4e-79 2
MGI|MGI:105047 - symbol:Psmc5 "protease (prosome, macropa... 580 2.4e-79 2
RGD|708376 - symbol:Psmc5 "proteasome (prosome, macropain... 580 2.4e-79 2
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 576 2.5e-79 2
WARNING: Descriptions of 681 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 858 (307.1 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
Identities = 167/183 (91%), Positives = 174/183 (95%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + VIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLLARAVASQLD NFLKVVSS+I
Sbjct: 158 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 217
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ
Sbjct: 218 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 277
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
MDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I LPNEQARL+ILKIHAGPI KH
Sbjct: 278 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH 337
Query: 681 GEI 683
GEI
Sbjct: 338 GEI 340
Score = 818 (293.0 bits), Expect = 6.0e-159, Sum P(2) = 6.0e-159
Identities = 162/208 (77%), Positives = 179/208 (86%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R L+ + SS+IVDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRR
Sbjct: 197 LARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 256
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
FSEGTSADREIQRTLMELLNQMDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I
Sbjct: 257 FSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHID 316
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNEQARL + IHAGPI KHGEIDYEA+VKLSD FNGADLRNVCTEAG+FAIR++
Sbjct: 317 LPNEQARLDI---LKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 373
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYR 463
++V QEDFMKAVRKV+D+KKL+ Y+
Sbjct: 374 DFVVQEDFMKAVRKVADSKKLESKLDYK 401
Score = 752 (269.8 bits), Expect = 6.0e-159, Sum P(2) = 6.0e-159
Identities = 160/201 (79%), Positives = 168/201 (83%)
Query: 46 DKSENDL-KALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKC 104
DK+ D K L + D L +REQLKELTKQY+KSENDLKALQSVGQ+ V K
Sbjct: 20 DKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIV--GEVLKQ 77
Query: 105 WT---VIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMS 161
T IVKATNGPRYVVGCRRQLDK+KLK GTRVALDMTTLTIMRYLPREVDPLVYNMS
Sbjct: 78 LTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMS 137
Query: 162 HEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLL 221
HEDPGD++YS IGGLSEQIRELREVIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLL
Sbjct: 138 HEDPGDVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLL 197
Query: 222 ARAVASQLDANFLKVVSSLFV 242
ARAVASQLD NFLKVVSS V
Sbjct: 198 ARAVASQLDCNFLKVVSSSIV 218
Score = 229 (85.7 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
Identities = 48/74 (64%), Positives = 59/74 (79%)
Query: 5 VVDEVRHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLL 64
++ + R K LQDYRKKL EH E++GRL+E+REQLKELTKQY+KSENDLKALQSVGQ
Sbjct: 14 IMADPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQ---- 69
Query: 65 LHCVREQLKELTKQ 78
V E LK+LT++
Sbjct: 70 --IVGEVLKQLTEE 81
Score = 183 (69.5 bits), Expect = 7.0e-92, Sum P(2) = 7.0e-92
Identities = 37/61 (60%), Positives = 48/61 (78%)
Query: 445 KAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKP 504
+A+ K+SD + TEAG+FAIR++ ++V QEDFMKAVRKV+D+KKLESKLDYKP
Sbjct: 343 EAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKP 402
Query: 505 V 505
V
Sbjct: 403 V 403
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 858 (307.1 bits), Expect = 1.0e-107, Sum P(2) = 1.0e-107
Identities = 167/183 (91%), Positives = 174/183 (95%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + VIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLLARAVASQLD NFLKVVSS+I
Sbjct: 144 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 203
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ
Sbjct: 204 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 263
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
MDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I LPNEQARL+ILKIHAGPI KH
Sbjct: 264 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH 323
Query: 681 GEI 683
GEI
Sbjct: 324 GEI 326
Score = 818 (293.0 bits), Expect = 6.0e-159, Sum P(2) = 6.0e-159
Identities = 162/208 (77%), Positives = 179/208 (86%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R L+ + SS+IVDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRR
Sbjct: 183 LARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 242
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
FSEGTSADREIQRTLMELLNQMDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I
Sbjct: 243 FSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHID 302
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNEQARL + IHAGPI KHGEIDYEA+VKLSD FNGADLRNVCTEAG+FAIR++
Sbjct: 303 LPNEQARLDI---LKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 359
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYR 463
++V QEDFMKAVRKV+D+KKL+ Y+
Sbjct: 360 DFVVQEDFMKAVRKVADSKKLESKLDYK 387
Score = 752 (269.8 bits), Expect = 6.0e-159, Sum P(2) = 6.0e-159
Identities = 160/201 (79%), Positives = 168/201 (83%)
Query: 46 DKSENDL-KALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKC 104
DK+ D K L + D L +REQLKELTKQY+KSENDLKALQSVGQ+ V K
Sbjct: 6 DKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIV--GEVLKQ 63
Query: 105 WT---VIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMS 161
T IVKATNGPRYVVGCRRQLDK+KLK GTRVALDMTTLTIMRYLPREVDPLVYNMS
Sbjct: 64 LTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMS 123
Query: 162 HEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLL 221
HEDPGD++YS IGGLSEQIRELREVIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLL
Sbjct: 124 HEDPGDVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLL 183
Query: 222 ARAVASQLDANFLKVVSSLFV 242
ARAVASQLD NFLKVVSS V
Sbjct: 184 ARAVASQLDCNFLKVVSSSIV 204
Score = 227 (85.0 bits), Expect = 1.0e-107, Sum P(2) = 1.0e-107
Identities = 48/69 (69%), Positives = 56/69 (81%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVR 69
R K LQDYRKKL EH E++GRL+E+REQLKELTKQY+KSENDLKALQSVGQ V
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQ------IVG 58
Query: 70 EQLKELTKQ 78
E LK+LT++
Sbjct: 59 EVLKQLTEE 67
Score = 183 (69.5 bits), Expect = 7.0e-92, Sum P(2) = 7.0e-92
Identities = 37/61 (60%), Positives = 48/61 (78%)
Query: 445 KAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKP 504
+A+ K+SD + TEAG+FAIR++ ++V QEDFMKAVRKV+D+KKLESKLDYKP
Sbjct: 329 EAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKP 388
Query: 505 V 505
V
Sbjct: 389 V 389
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 852 (305.0 bits), Expect = 3.5e-107, Sum P(2) = 3.5e-107
Identities = 165/183 (90%), Positives = 174/183 (95%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + VIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLLARAVASQLD NFLKVVSS+I
Sbjct: 144 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 203
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ
Sbjct: 204 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 263
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
MDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I LPNEQARL+ILKIH+GPI KH
Sbjct: 264 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQARLDILKIHSGPITKH 323
Query: 681 GEI 683
G+I
Sbjct: 324 GDI 326
Score = 824 (295.1 bits), Expect = 1.6e-158, Sum P(2) = 1.6e-158
Identities = 163/208 (78%), Positives = 180/208 (86%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R L+ + SS+IVDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRR
Sbjct: 183 LARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 242
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
FSEGTSADREIQRTLMELLNQMDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I
Sbjct: 243 FSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIE 302
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNEQARL + IH+GPI KHG+IDYEA+VKLSD FNGADLRNVCTEAG+FAIR++
Sbjct: 303 LPNEQARLDI---LKIHSGPITKHGDIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 359
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYR 463
EYVTQEDFMKAVRKV+D+KKL+ Y+
Sbjct: 360 EYVTQEDFMKAVRKVADSKKLESKLDYK 387
Score = 742 (266.3 bits), Expect = 1.6e-158, Sum P(2) = 1.6e-158
Identities = 152/178 (85%), Positives = 158/178 (88%)
Query: 68 VREQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKCWT---VIVKATNGPRYVVGCRRQ 124
+REQLKELTKQY+KSENDLKALQSVGQ+ V K T IVKATNGPRYVVGCRRQ
Sbjct: 29 LREQLKELTKQYEKSENDLKALQSVGQIV--GEVLKQLTEEKFIVKATNGPRYVVGCRRQ 86
Query: 125 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 184
LDK+KLK GTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG ++YS IGGLSEQIRELR
Sbjct: 87 LDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGSVSYSEIGGLSEQIRELR 146
Query: 185 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
EVIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLLARAVASQLD NFLKVVSS V
Sbjct: 147 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIV 204
Score = 228 (85.3 bits), Expect = 3.5e-107, Sum P(2) = 3.5e-107
Identities = 49/71 (69%), Positives = 57/71 (80%)
Query: 8 EVRHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHC 67
E R K LQDYRKKL EH E++GRL+E+REQLKELTKQY+KSENDLKALQSVGQ
Sbjct: 3 ENREKGLQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQ------I 56
Query: 68 VREQLKELTKQ 78
V E LK+LT++
Sbjct: 57 VGEVLKQLTEE 67
Score = 195 (73.7 bits), Expect = 4.3e-92, Sum P(2) = 4.3e-92
Identities = 40/61 (65%), Positives = 49/61 (80%)
Query: 445 KAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKP 504
+A+ K+SD + TEAG+FAIR++ EYVTQEDFMKAVRKV+D+KKLESKLDYKP
Sbjct: 329 EAIVKLSDGFNGADLRNVCTEAGMFAIRADHEYVTQEDFMKAVRKVADSKKLESKLDYKP 388
Query: 505 V 505
V
Sbjct: 389 V 389
Score = 40 (19.1 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 17/44 (38%), Positives = 19/44 (43%)
Query: 149 LPREVDPLVYNMSHEDP----GDITYSAIGGLSEQIR--ELREV 186
LP E L H P GDI Y AI LS+ +LR V
Sbjct: 303 LPNEQARLDILKIHSGPITKHGDIDYEAIVKLSDGFNGADLRNV 346
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 858 (307.1 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
Identities = 167/183 (91%), Positives = 174/183 (95%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + VIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLLARAVASQLD NFLKVVSS+I
Sbjct: 150 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 209
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ
Sbjct: 210 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 269
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
MDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I LPNEQARL+ILKIHAGPI KH
Sbjct: 270 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH 329
Query: 681 GEI 683
GEI
Sbjct: 330 GEI 332
Score = 818 (293.0 bits), Expect = 2.0e-158, Sum P(2) = 2.0e-158
Identities = 162/208 (77%), Positives = 179/208 (86%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R L+ + SS+IVDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRR
Sbjct: 189 LARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 248
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
FSEGTSADREIQRTLMELLNQMDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I
Sbjct: 249 FSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHID 308
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNEQARL + IHAGPI KHGEIDYEA+VKLSD FNGADLRNVCTEAG+FAIR++
Sbjct: 309 LPNEQARLDI---LKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 365
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYR 463
++V QEDFMKAVRKV+D+KKL+ Y+
Sbjct: 366 DFVVQEDFMKAVRKVADSKKLESKLDYK 393
Score = 747 (268.0 bits), Expect = 2.0e-158, Sum P(2) = 2.0e-158
Identities = 159/201 (79%), Positives = 168/201 (83%)
Query: 46 DKSENDL-KALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKC 104
DK+ D K L + D L +REQLKELTKQY+KSENDLKALQSVGQ+ V K
Sbjct: 12 DKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIV--GEVLKQ 69
Query: 105 WT---VIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMS 161
T IVKATNGPRYVVGCRRQLDK+KLK GTRVALDMTTLTIMRYLPREVDPLVYNMS
Sbjct: 70 LTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMS 129
Query: 162 HEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLL 221
HEDPG+++YS IGGLSEQIRELREVIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLL
Sbjct: 130 HEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLL 189
Query: 222 ARAVASQLDANFLKVVSSLFV 242
ARAVASQLD NFLKVVSS V
Sbjct: 190 ARAVASQLDCNFLKVVSSSIV 210
Score = 229 (85.7 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
Identities = 48/74 (64%), Positives = 59/74 (79%)
Query: 5 VVDEVRHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLL 64
++ + R K LQDYRKKL EH E++GRL+E+REQLKELTKQY+KSENDLKALQSVGQ
Sbjct: 6 IMADPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQ---- 61
Query: 65 LHCVREQLKELTKQ 78
V E LK+LT++
Sbjct: 62 --IVGEVLKQLTEE 73
Score = 183 (69.5 bits), Expect = 2.4e-91, Sum P(2) = 2.4e-91
Identities = 37/61 (60%), Positives = 48/61 (78%)
Query: 445 KAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKP 504
+A+ K+SD + TEAG+FAIR++ ++V QEDFMKAVRKV+D+KKLESKLDYKP
Sbjct: 335 EAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKP 394
Query: 505 V 505
V
Sbjct: 395 V 395
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 858 (307.1 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
Identities = 167/183 (91%), Positives = 174/183 (95%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + VIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLLARAVASQLD NFLKVVSS+I
Sbjct: 158 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 217
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ
Sbjct: 218 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 277
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
MDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I LPNEQARL+ILKIHAGPI KH
Sbjct: 278 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH 337
Query: 681 GEI 683
GEI
Sbjct: 338 GEI 340
Score = 818 (293.0 bits), Expect = 2.0e-158, Sum P(2) = 2.0e-158
Identities = 162/208 (77%), Positives = 179/208 (86%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R L+ + SS+IVDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRR
Sbjct: 197 LARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 256
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
FSEGTSADREIQRTLMELLNQMDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I
Sbjct: 257 FSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHID 316
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNEQARL + IHAGPI KHGEIDYEA+VKLSD FNGADLRNVCTEAG+FAIR++
Sbjct: 317 LPNEQARLDI---LKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 373
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYR 463
++V QEDFMKAVRKV+D+KKL+ Y+
Sbjct: 374 DFVVQEDFMKAVRKVADSKKLESKLDYK 401
Score = 747 (268.0 bits), Expect = 2.0e-158, Sum P(2) = 2.0e-158
Identities = 159/201 (79%), Positives = 168/201 (83%)
Query: 46 DKSENDL-KALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKC 104
DK+ D K L + D L +REQLKELTKQY+KSENDLKALQSVGQ+ V K
Sbjct: 20 DKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIV--GEVLKQ 77
Query: 105 WT---VIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMS 161
T IVKATNGPRYVVGCRRQLDK+KLK GTRVALDMTTLTIMRYLPREVDPLVYNMS
Sbjct: 78 LTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMS 137
Query: 162 HEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLL 221
HEDPG+++YS IGGLSEQIRELREVIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLL
Sbjct: 138 HEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLL 197
Query: 222 ARAVASQLDANFLKVVSSLFV 242
ARAVASQLD NFLKVVSS V
Sbjct: 198 ARAVASQLDCNFLKVVSSSIV 218
Score = 229 (85.7 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
Identities = 48/74 (64%), Positives = 59/74 (79%)
Query: 5 VVDEVRHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLL 64
++ + R K LQDYRKKL EH E++GRL+E+REQLKELTKQY+KSENDLKALQSVGQ
Sbjct: 14 IMADPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQ---- 69
Query: 65 LHCVREQLKELTKQ 78
V E LK+LT++
Sbjct: 70 --IVGEVLKQLTEE 81
Score = 183 (69.5 bits), Expect = 2.4e-91, Sum P(2) = 2.4e-91
Identities = 37/61 (60%), Positives = 48/61 (78%)
Query: 445 KAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKP 504
+A+ K+SD + TEAG+FAIR++ ++V QEDFMKAVRKV+D+KKLESKLDYKP
Sbjct: 343 EAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKP 402
Query: 505 V 505
V
Sbjct: 403 V 403
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 858 (307.1 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
Identities = 167/183 (91%), Positives = 174/183 (95%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + VIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLLARAVASQLD NFLKVVSS+I
Sbjct: 158 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 217
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ
Sbjct: 218 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 277
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
MDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I LPNEQARL+ILKIHAGPI KH
Sbjct: 278 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH 337
Query: 681 GEI 683
GEI
Sbjct: 338 GEI 340
Score = 818 (293.0 bits), Expect = 2.0e-158, Sum P(2) = 2.0e-158
Identities = 162/208 (77%), Positives = 179/208 (86%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R L+ + SS+IVDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRR
Sbjct: 197 LARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 256
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
FSEGTSADREIQRTLMELLNQMDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I
Sbjct: 257 FSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHID 316
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNEQARL + IHAGPI KHGEIDYEA+VKLSD FNGADLRNVCTEAG+FAIR++
Sbjct: 317 LPNEQARLDI---LKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 373
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYR 463
++V QEDFMKAVRKV+D+KKL+ Y+
Sbjct: 374 DFVVQEDFMKAVRKVADSKKLESKLDYK 401
Score = 747 (268.0 bits), Expect = 2.0e-158, Sum P(2) = 2.0e-158
Identities = 159/201 (79%), Positives = 168/201 (83%)
Query: 46 DKSENDL-KALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKC 104
DK+ D K L + D L +REQLKELTKQY+KSENDLKALQSVGQ+ V K
Sbjct: 20 DKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIV--GEVLKQ 77
Query: 105 WT---VIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMS 161
T IVKATNGPRYVVGCRRQLDK+KLK GTRVALDMTTLTIMRYLPREVDPLVYNMS
Sbjct: 78 LTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMS 137
Query: 162 HEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLL 221
HEDPG+++YS IGGLSEQIRELREVIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLL
Sbjct: 138 HEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLL 197
Query: 222 ARAVASQLDANFLKVVSSLFV 242
ARAVASQLD NFLKVVSS V
Sbjct: 198 ARAVASQLDCNFLKVVSSSIV 218
Score = 229 (85.7 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
Identities = 48/74 (64%), Positives = 59/74 (79%)
Query: 5 VVDEVRHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLL 64
++ + R K LQDYRKKL EH E++GRL+E+REQLKELTKQY+KSENDLKALQSVGQ
Sbjct: 14 IMADPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQ---- 69
Query: 65 LHCVREQLKELTKQ 78
V E LK+LT++
Sbjct: 70 --IVGEVLKQLTEE 81
Score = 183 (69.5 bits), Expect = 2.4e-91, Sum P(2) = 2.4e-91
Identities = 37/61 (60%), Positives = 48/61 (78%)
Query: 445 KAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKP 504
+A+ K+SD + TEAG+FAIR++ ++V QEDFMKAVRKV+D+KKLESKLDYKP
Sbjct: 343 EAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKP 402
Query: 505 V 505
V
Sbjct: 403 V 403
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 858 (307.1 bits), Expect = 1.0e-107, Sum P(2) = 1.0e-107
Identities = 167/183 (91%), Positives = 174/183 (95%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + VIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLLARAVASQLD NFLKVVSS+I
Sbjct: 144 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 203
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ
Sbjct: 204 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 263
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
MDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I LPNEQARL+ILKIHAGPI KH
Sbjct: 264 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH 323
Query: 681 GEI 683
GEI
Sbjct: 324 GEI 326
Score = 818 (293.0 bits), Expect = 2.0e-158, Sum P(2) = 2.0e-158
Identities = 162/208 (77%), Positives = 179/208 (86%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R L+ + SS+IVDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRR
Sbjct: 183 LARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 242
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
FSEGTSADREIQRTLMELLNQMDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I
Sbjct: 243 FSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHID 302
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNEQARL + IHAGPI KHGEIDYEA+VKLSD FNGADLRNVCTEAG+FAIR++
Sbjct: 303 LPNEQARLDI---LKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 359
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYR 463
++V QEDFMKAVRKV+D+KKL+ Y+
Sbjct: 360 DFVVQEDFMKAVRKVADSKKLESKLDYK 387
Score = 747 (268.0 bits), Expect = 2.0e-158, Sum P(2) = 2.0e-158
Identities = 159/201 (79%), Positives = 168/201 (83%)
Query: 46 DKSENDL-KALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKC 104
DK+ D K L + D L +REQLKELTKQY+KSENDLKALQSVGQ+ V K
Sbjct: 6 DKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIV--GEVLKQ 63
Query: 105 WT---VIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMS 161
T IVKATNGPRYVVGCRRQLDK+KLK GTRVALDMTTLTIMRYLPREVDPLVYNMS
Sbjct: 64 LTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMS 123
Query: 162 HEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLL 221
HEDPG+++YS IGGLSEQIRELREVIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLL
Sbjct: 124 HEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLL 183
Query: 222 ARAVASQLDANFLKVVSSLFV 242
ARAVASQLD NFLKVVSS V
Sbjct: 184 ARAVASQLDCNFLKVVSSSIV 204
Score = 227 (85.0 bits), Expect = 1.0e-107, Sum P(2) = 1.0e-107
Identities = 48/69 (69%), Positives = 56/69 (81%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVR 69
R K LQDYRKKL EH E++GRL+E+REQLKELTKQY+KSENDLKALQSVGQ V
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQ------IVG 58
Query: 70 EQLKELTKQ 78
E LK+LT++
Sbjct: 59 EVLKQLTEE 67
Score = 183 (69.5 bits), Expect = 2.4e-91, Sum P(2) = 2.4e-91
Identities = 37/61 (60%), Positives = 48/61 (78%)
Query: 445 KAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKP 504
+A+ K+SD + TEAG+FAIR++ ++V QEDFMKAVRKV+D+KKLESKLDYKP
Sbjct: 329 EAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKP 388
Query: 505 V 505
V
Sbjct: 389 V 389
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 858 (307.1 bits), Expect = 1.0e-107, Sum P(2) = 1.0e-107
Identities = 167/183 (91%), Positives = 174/183 (95%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + VIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLLARAVASQLD NFLKVVSS+I
Sbjct: 144 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 203
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ
Sbjct: 204 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 263
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
MDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I LPNEQARL+ILKIHAGPI KH
Sbjct: 264 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH 323
Query: 681 GEI 683
GEI
Sbjct: 324 GEI 326
Score = 818 (293.0 bits), Expect = 2.0e-158, Sum P(2) = 2.0e-158
Identities = 162/208 (77%), Positives = 179/208 (86%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R L+ + SS+IVDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRR
Sbjct: 183 LARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 242
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
FSEGTSADREIQRTLMELLNQMDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I
Sbjct: 243 FSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHID 302
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNEQARL + IHAGPI KHGEIDYEA+VKLSD FNGADLRNVCTEAG+FAIR++
Sbjct: 303 LPNEQARLDI---LKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 359
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYR 463
++V QEDFMKAVRKV+D+KKL+ Y+
Sbjct: 360 DFVVQEDFMKAVRKVADSKKLESKLDYK 387
Score = 747 (268.0 bits), Expect = 2.0e-158, Sum P(2) = 2.0e-158
Identities = 159/201 (79%), Positives = 168/201 (83%)
Query: 46 DKSENDL-KALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKC 104
DK+ D K L + D L +REQLKELTKQY+KSENDLKALQSVGQ+ V K
Sbjct: 6 DKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIV--GEVLKQ 63
Query: 105 WT---VIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMS 161
T IVKATNGPRYVVGCRRQLDK+KLK GTRVALDMTTLTIMRYLPREVDPLVYNMS
Sbjct: 64 LTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMS 123
Query: 162 HEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLL 221
HEDPG+++YS IGGLSEQIRELREVIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLL
Sbjct: 124 HEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLL 183
Query: 222 ARAVASQLDANFLKVVSSLFV 242
ARAVASQLD NFLKVVSS V
Sbjct: 184 ARAVASQLDCNFLKVVSSSIV 204
Score = 227 (85.0 bits), Expect = 1.0e-107, Sum P(2) = 1.0e-107
Identities = 48/69 (69%), Positives = 56/69 (81%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVR 69
R K LQDYRKKL EH E++GRL+E+REQLKELTKQY+KSENDLKALQSVGQ V
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQ------IVG 58
Query: 70 EQLKELTKQ 78
E LK+LT++
Sbjct: 59 EVLKQLTEE 67
Score = 183 (69.5 bits), Expect = 2.4e-91, Sum P(2) = 2.4e-91
Identities = 37/61 (60%), Positives = 48/61 (78%)
Query: 445 KAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKP 504
+A+ K+SD + TEAG+FAIR++ ++V QEDFMKAVRKV+D+KKLESKLDYKP
Sbjct: 329 EAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKP 388
Query: 505 V 505
V
Sbjct: 389 V 389
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 858 (307.1 bits), Expect = 1.0e-107, Sum P(2) = 1.0e-107
Identities = 167/183 (91%), Positives = 174/183 (95%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + VIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLLARAVASQLD NFLKVVSS+I
Sbjct: 144 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 203
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ
Sbjct: 204 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 263
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
MDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I LPNEQARL+ILKIHAGPI KH
Sbjct: 264 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH 323
Query: 681 GEI 683
GEI
Sbjct: 324 GEI 326
Score = 818 (293.0 bits), Expect = 2.0e-158, Sum P(2) = 2.0e-158
Identities = 162/208 (77%), Positives = 179/208 (86%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R L+ + SS+IVDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRR
Sbjct: 183 LARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 242
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
FSEGTSADREIQRTLMELLNQMDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I
Sbjct: 243 FSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHID 302
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNEQARL + IHAGPI KHGEIDYEA+VKLSD FNGADLRNVCTEAG+FAIR++
Sbjct: 303 LPNEQARLDI---LKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 359
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYR 463
++V QEDFMKAVRKV+D+KKL+ Y+
Sbjct: 360 DFVVQEDFMKAVRKVADSKKLESKLDYK 387
Score = 747 (268.0 bits), Expect = 2.0e-158, Sum P(2) = 2.0e-158
Identities = 159/201 (79%), Positives = 168/201 (83%)
Query: 46 DKSENDL-KALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKC 104
DK+ D K L + D L +REQLKELTKQY+KSENDLKALQSVGQ+ V K
Sbjct: 6 DKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIV--GEVLKQ 63
Query: 105 WT---VIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMS 161
T IVKATNGPRYVVGCRRQLDK+KLK GTRVALDMTTLTIMRYLPREVDPLVYNMS
Sbjct: 64 LTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMS 123
Query: 162 HEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLL 221
HEDPG+++YS IGGLSEQIRELREVIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLL
Sbjct: 124 HEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLL 183
Query: 222 ARAVASQLDANFLKVVSSLFV 242
ARAVASQLD NFLKVVSS V
Sbjct: 184 ARAVASQLDCNFLKVVSSSIV 204
Score = 227 (85.0 bits), Expect = 1.0e-107, Sum P(2) = 1.0e-107
Identities = 48/69 (69%), Positives = 56/69 (81%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVR 69
R K LQDYRKKL EH E++GRL+E+REQLKELTKQY+KSENDLKALQSVGQ V
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQ------IVG 58
Query: 70 EQLKELTKQ 78
E LK+LT++
Sbjct: 59 EVLKQLTEE 67
Score = 183 (69.5 bits), Expect = 2.4e-91, Sum P(2) = 2.4e-91
Identities = 37/61 (60%), Positives = 48/61 (78%)
Query: 445 KAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKP 504
+A+ K+SD + TEAG+FAIR++ ++V QEDFMKAVRKV+D+KKLESKLDYKP
Sbjct: 329 EAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKP 388
Query: 505 V 505
V
Sbjct: 389 V 389
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 858 (307.1 bits), Expect = 1.0e-107, Sum P(2) = 1.0e-107
Identities = 167/183 (91%), Positives = 174/183 (95%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + VIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLLARAVASQLD NFLKVVSS+I
Sbjct: 144 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 203
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ
Sbjct: 204 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 263
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
MDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I LPNEQARL+ILKIHAGPI KH
Sbjct: 264 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH 323
Query: 681 GEI 683
GEI
Sbjct: 324 GEI 326
Score = 818 (293.0 bits), Expect = 2.0e-158, Sum P(2) = 2.0e-158
Identities = 162/208 (77%), Positives = 179/208 (86%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R L+ + SS+IVDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRR
Sbjct: 183 LARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 242
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
FSEGTSADREIQRTLMELLNQMDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I
Sbjct: 243 FSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHID 302
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNEQARL + IHAGPI KHGEIDYEA+VKLSD FNGADLRNVCTEAG+FAIR++
Sbjct: 303 LPNEQARLDI---LKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 359
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYR 463
++V QEDFMKAVRKV+D+KKL+ Y+
Sbjct: 360 DFVVQEDFMKAVRKVADSKKLESKLDYK 387
Score = 747 (268.0 bits), Expect = 2.0e-158, Sum P(2) = 2.0e-158
Identities = 159/201 (79%), Positives = 168/201 (83%)
Query: 46 DKSENDL-KALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKC 104
DK+ D K L + D L +REQLKELTKQY+KSENDLKALQSVGQ+ V K
Sbjct: 6 DKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIV--GEVLKQ 63
Query: 105 WT---VIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMS 161
T IVKATNGPRYVVGCRRQLDK+KLK GTRVALDMTTLTIMRYLPREVDPLVYNMS
Sbjct: 64 LTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMS 123
Query: 162 HEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLL 221
HEDPG+++YS IGGLSEQIRELREVIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLL
Sbjct: 124 HEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLL 183
Query: 222 ARAVASQLDANFLKVVSSLFV 242
ARAVASQLD NFLKVVSS V
Sbjct: 184 ARAVASQLDCNFLKVVSSSIV 204
Score = 227 (85.0 bits), Expect = 1.0e-107, Sum P(2) = 1.0e-107
Identities = 48/69 (69%), Positives = 56/69 (81%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVR 69
R K LQDYRKKL EH E++GRL+E+REQLKELTKQY+KSENDLKALQSVGQ V
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQ------IVG 58
Query: 70 EQLKELTKQ 78
E LK+LT++
Sbjct: 59 EVLKQLTEE 67
Score = 183 (69.5 bits), Expect = 2.4e-91, Sum P(2) = 2.4e-91
Identities = 37/61 (60%), Positives = 48/61 (78%)
Query: 445 KAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKP 504
+A+ K+SD + TEAG+FAIR++ ++V QEDFMKAVRKV+D+KKLESKLDYKP
Sbjct: 329 EAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKP 388
Query: 505 V 505
V
Sbjct: 389 V 389
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 858 (307.1 bits), Expect = 9.2e-107, Sum P(2) = 9.2e-107
Identities = 167/183 (91%), Positives = 174/183 (95%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + VIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLLARAVASQLD NFLKVVSS+I
Sbjct: 136 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 195
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ
Sbjct: 196 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 255
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
MDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I LPNEQARL+ILKIHAGPI KH
Sbjct: 256 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH 315
Query: 681 GEI 683
GEI
Sbjct: 316 GEI 318
Score = 818 (293.0 bits), Expect = 5.4e-158, Sum P(2) = 5.4e-158
Identities = 162/208 (77%), Positives = 179/208 (86%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R L+ + SS+IVDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRR
Sbjct: 175 LARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 234
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
FSEGTSADREIQRTLMELLNQMDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I
Sbjct: 235 FSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHID 294
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNEQARL + IHAGPI KHGEIDYEA+VKLSD FNGADLRNVCTEAG+FAIR++
Sbjct: 295 LPNEQARLDI---LKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADH 351
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYR 463
++V QEDFMKAVRKV+D+KKL+ Y+
Sbjct: 352 DFVVQEDFMKAVRKVADSKKLESKLDYK 379
Score = 743 (266.6 bits), Expect = 5.4e-158, Sum P(2) = 5.4e-158
Identities = 152/178 (85%), Positives = 159/178 (89%)
Query: 68 VREQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKCWT---VIVKATNGPRYVVGCRRQ 124
+REQLKELTKQY+KSENDLKALQSVGQ+ V K T IVKATNGPRYVVGCRRQ
Sbjct: 21 LREQLKELTKQYEKSENDLKALQSVGQIV--GEVLKQLTEEKFIVKATNGPRYVVGCRRQ 78
Query: 125 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 184
LDK+KLK GTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG+++YS IGGLSEQIRELR
Sbjct: 79 LDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELR 138
Query: 185 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
EVIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLLARAVASQLD NFLKVVSS V
Sbjct: 139 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIV 196
Score = 218 (81.8 bits), Expect = 9.2e-107, Sum P(2) = 9.2e-107
Identities = 46/65 (70%), Positives = 54/65 (83%)
Query: 14 LQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQLK 73
LQDYRKKL EH E++GRL+E+REQLKELTKQY+KSENDLKALQSVGQ V E LK
Sbjct: 1 LQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQ------IVGEVLK 54
Query: 74 ELTKQ 78
+LT++
Sbjct: 55 QLTEE 59
Score = 183 (69.5 bits), Expect = 6.2e-91, Sum P(2) = 6.2e-91
Identities = 37/61 (60%), Positives = 48/61 (78%)
Query: 445 KAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKP 504
+A+ K+SD + TEAG+FAIR++ ++V QEDFMKAVRKV+D+KKLESKLDYKP
Sbjct: 321 EAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKP 380
Query: 505 V 505
V
Sbjct: 381 V 381
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 858 (307.1 bits), Expect = 1.0e-107, Sum P(2) = 1.0e-107
Identities = 167/183 (91%), Positives = 174/183 (95%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + VIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLLARAVASQLD NFLKVVSS+I
Sbjct: 144 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 203
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ
Sbjct: 204 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 263
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
MDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I LPNEQARL+ILKIHAGPI KH
Sbjct: 264 MDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH 323
Query: 681 GEI 683
GEI
Sbjct: 324 GEI 326
Score = 811 (290.5 bits), Expect = 1.1e-157, Sum P(2) = 1.1e-157
Identities = 161/208 (77%), Positives = 178/208 (85%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R L+ + SS+IVDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRR
Sbjct: 183 LARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 242
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
FSEGTSADREIQRTLMELLNQMDGFD+L +VKMIMATNRPDTLDPALLRPGRLDRKI I
Sbjct: 243 FSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHID 302
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNEQARL + IHAGPI KHGEIDYEA+VKLSD FNGADL NVCTEAG+FAIR++
Sbjct: 303 LPNEQARLDI---LKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRADH 359
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYR 463
++V QEDFMKAVRKV+D+KKL+ Y+
Sbjct: 360 DFVVQEDFMKAVRKVADSKKLESKLDYK 387
Score = 747 (268.0 bits), Expect = 1.1e-157, Sum P(2) = 1.1e-157
Identities = 159/201 (79%), Positives = 168/201 (83%)
Query: 46 DKSENDL-KALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKC 104
DK+ D K L + D L +REQLKELTKQY+KSENDLKALQSVGQ+ V K
Sbjct: 6 DKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIV--GEVLKQ 63
Query: 105 WT---VIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMS 161
T IVKATNGPRYVVGCRRQLDK+KLK GTRVALDMTTLTIMRYLPREVDPLVYNMS
Sbjct: 64 LTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMS 123
Query: 162 HEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLL 221
HEDPG+++YS IGGLSEQIRELREVIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLL
Sbjct: 124 HEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLL 183
Query: 222 ARAVASQLDANFLKVVSSLFV 242
ARAVASQLD NFLKVVSS V
Sbjct: 184 ARAVASQLDCNFLKVVSSSIV 204
Score = 227 (85.0 bits), Expect = 1.0e-107, Sum P(2) = 1.0e-107
Identities = 48/69 (69%), Positives = 56/69 (81%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVR 69
R K LQDYRKKL EH E++GRL+E+REQLKELTKQY+KSENDLKALQSVGQ V
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQ------IVG 58
Query: 70 EQLKELTKQ 78
E LK+LT++
Sbjct: 59 EVLKQLTEE 67
Score = 183 (69.5 bits), Expect = 2.4e-91, Sum P(2) = 2.4e-91
Identities = 37/61 (60%), Positives = 48/61 (78%)
Query: 445 KAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKP 504
+A+ K+SD + TEAG+FAIR++ ++V QEDFMKAVRKV+D+KKLESKLDYKP
Sbjct: 329 EAIVKLSDGFNGADLGNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKP 388
Query: 505 V 505
V
Sbjct: 389 V 389
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 834 (298.6 bits), Expect = 2.0e-96, Sum P(2) = 2.0e-96
Identities = 161/178 (90%), Positives = 169/178 (94%)
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
IELPL+NPELF RVGI PPKG LLYGPPGTGKTLLARA+AS +DANFLKVVSSAI+DKYI
Sbjct: 155 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYI 214
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 625
GESARLIREMFNYAR HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD
Sbjct: 215 GESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 274
Query: 626 SLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGEI 683
LG+VKMIMATNRPD LDPALLRPGRLDRKIEIPLPNEQ+R+EILKIHA IAKHGEI
Sbjct: 275 QLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEI 332
Score = 816 (292.3 bits), Expect = 5.4e-145, Sum P(2) = 5.4e-145
Identities = 158/212 (74%), Positives = 179/212 (84%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R +++ + SSAI+DKYIGESARLIREMFNYAR HQPCIIFMDEIDAIGGRR
Sbjct: 189 LARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRR 248
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
FSEGTSADREIQRTLMELLNQ+DGFD LG+VKMIMATNRPD LDPALLRPGRLDRKIEIP
Sbjct: 249 FSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIP 308
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNEQ+R+ + IHA IAKHGEIDYEA+VKL + FNGADLRN+CTEAG+FAIR+ER
Sbjct: 309 LPNEQSRMEI---LKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAER 365
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAG 467
+YV EDFMKAVRK+S+ KKL+ + Y + G
Sbjct: 366 DYVIHEDFMKAVRKLSEAKKLESSSHYNADFG 397
Score = 622 (224.0 bits), Expect = 5.4e-145, Sum P(2) = 5.4e-145
Identities = 123/176 (69%), Positives = 147/176 (83%)
Query: 69 REQLKELTKQYDKSENDLKALQSVGQV--SLSTSVSKCWTVIVKATNGPRYVVGCRRQLD 126
RE L+ K+++K+E+DLK+LQSVGQ+ + + +IVKA++GPRYVVGCR ++D
Sbjct: 36 RENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDN-ERLIVKASSGPRYVVGCRSKVD 94
Query: 127 KAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREV 186
K KL SGTRV LDMTTLTIMR LPREVDP+VYNM HEDPG+I+YSA+GGL +QIRELRE
Sbjct: 95 KEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRES 154
Query: 187 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
IELPL+NPELF RVGI PPKG LLYGPPGTGKTLLARA+AS +DANFLKVVSS +
Sbjct: 155 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAII 210
Score = 144 (55.7 bits), Expect = 2.0e-96, Sum P(2) = 2.0e-96
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 7 DEVRHKT--LQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQ 60
D R +T + DYRKKL H E+E R+R RE L+ K+++K+E+DLK+LQSVGQ
Sbjct: 6 DAARRRTAAVTDYRKKLLHHKELESRVRTARENLRAAKKEFNKTEDDLKSLQSVGQ 61
Score = 141 (54.7 bits), Expect = 9.7e-74, Sum P(2) = 9.7e-74
Identities = 28/39 (71%), Positives = 33/39 (84%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDY 502
TEAG+FAIR+ER+YV EDFMKAVRK+S+ KKLES Y
Sbjct: 354 TEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSSHY 392
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 832 (297.9 bits), Expect = 4.3e-94, Sum P(2) = 4.3e-94
Identities = 163/200 (81%), Positives = 175/200 (87%)
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
IELPL+NPELF RVGI PPKG LLYGPPGTGKTLLARA+AS +DANFLK+VSSAI+DKYI
Sbjct: 156 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYI 215
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 625
GESARLIREMF YAR+HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD
Sbjct: 216 GESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 275
Query: 626 SLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGEIG- 684
LG+VKMIMATNRPD LDPALLRPGRLDRKIEIPLPNEQAR+E+LKIHA IAKHGEI
Sbjct: 276 ELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQARMEVLKIHAAGIAKHGEIDY 335
Query: 685 DAATKWVLPFTAGGFIYIAT 704
+A K F + T
Sbjct: 336 EAVVKLAEGFNGADLRNVCT 355
Score = 809 (289.8 bits), Expect = 1.1e-144, Sum P(2) = 1.1e-144
Identities = 159/212 (75%), Positives = 178/212 (83%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R +++ + SSAI+DKYIGESARLIREMF YAR+HQPCIIFMDEIDAIGGRR
Sbjct: 190 LARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRR 249
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
FSEGTSADREIQRTLMELLNQ+DGFD LG+VKMIMATNRPD LDPALLRPGRLDRKIEIP
Sbjct: 250 FSEGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIP 309
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNEQAR+ + IHA IAKHGEIDYEAVVKL++ FNGADLRNVCTEAG+ AIR+ER
Sbjct: 310 LPNEQARME---VLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAER 366
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAG 467
+YV EDFMKAVRK++D KKL+ Y + G
Sbjct: 367 DYVVHEDFMKAVRKLNDAKKLESSAHYSADFG 398
Score = 626 (225.4 bits), Expect = 1.1e-144, Sum P(2) = 1.1e-144
Identities = 124/177 (70%), Positives = 146/177 (82%)
Query: 68 VREQLKELTKQYDKSENDLKALQSVGQV--SLSTSVSKCWTVIVKATNGPRYVVGCRRQL 125
VRE LK K + K+E+DLK+LQSVGQ+ + + IVKA++GPRYVVGCR ++
Sbjct: 36 VRENLKNAKKDFTKTEDDLKSLQSVGQIIGEVLRPLDN-ERFIVKASSGPRYVVGCRSKV 94
Query: 126 DKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELRE 185
DK KL SGTRV LDMTTLTIMR LPREVDP+VYNM HEDPG+++YSA+GGLS+QIRELRE
Sbjct: 95 DKEKLTSGTRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRE 154
Query: 186 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
IELPL+NPELF RVGI PPKG LLYGPPGTGKTLLARA+AS +DANFLK+VSS +
Sbjct: 155 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKIVSSAII 211
Score = 137 (53.3 bits), Expect = 9.7e-74, Sum P(2) = 9.7e-74
Identities = 30/58 (51%), Positives = 40/58 (68%)
Query: 445 KAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDY 502
+AV K+++ + TEAG+ AIR+ER+YV EDFMKAVRK++D KKLES Y
Sbjct: 336 EAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVVHEDFMKAVRKLNDAKKLESSAHY 393
Score = 124 (48.7 bits), Expect = 4.3e-94, Sum P(2) = 4.3e-94
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQ 60
R ++ +YRKKL E+E R+ +RE LK K + K+E+DLK+LQSVGQ
Sbjct: 12 RRASVTEYRKKLLNCRELESRVSTVRENLKNAKKDFTKTEDDLKSLQSVGQ 62
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 781 (280.0 bits), Expect = 1.7e-88, Sum P(2) = 1.7e-88
Identities = 152/183 (83%), Positives = 164/183 (89%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + VIELPL NPELFQRVGI PPKG LLYGPPGTGKTLLARAVAS ++ NFLKVVSSAI
Sbjct: 148 ELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVASSMETNFLKVVSSAI 207
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESARLIREMF YA+ H+PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ
Sbjct: 208 VDKYIGESARLIREMFGYAKEHEPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 267
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
+DGFD LG+ K+IMATNRPDTLDPALLR GRLDRKIEIPLPNE RLEILKIH+ +
Sbjct: 268 LDGFDYLGKTKIIMATNRPDTLDPALLRAGRLDRKIEIPLPNEVGRLEILKIHSSTVQME 327
Query: 681 GEI 683
G+I
Sbjct: 328 GDI 330
Score = 710 (255.0 bits), Expect = 1.4e-133, Sum P(2) = 1.4e-133
Identities = 141/202 (69%), Positives = 163/202 (80%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R +E + SSAIVDKYIGESARLIREMF YA+ H+PCIIFMDEIDAIGGRR
Sbjct: 187 LARAVASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMDEIDAIGGRR 246
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
FSEGTSADREIQRTLMELLNQ+DGFD LG+ K+IMATNRPDTLDPALLR GRLDRKIEIP
Sbjct: 247 FSEGTSADREIQRTLMELLNQLDGFDYLGKTKIIMATNRPDTLDPALLRAGRLDRKIEIP 306
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNE RL + IH+ + G+ID+E+VVK+SD NGADLRNV TEAGLFAI+ R
Sbjct: 307 LPNEVGRLEI---LKIHSSTVQMEGDIDFESVVKMSDGLNGADLRNVVTEAGLFAIKDYR 363
Query: 436 EYVTQEDFMKAVRKVSDNKKLD 457
+ + Q+DF +AVRKV++ KKL+
Sbjct: 364 DAINQDDFNRAVRKVAEAKKLE 385
Score = 620 (223.3 bits), Expect = 1.4e-133, Sum P(2) = 1.4e-133
Identities = 133/218 (61%), Positives = 164/218 (75%)
Query: 27 VEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQLKELTKQYDKSENDL 86
+ G + REQ E +Y +S DL+ + + L +R +K+L +++D SE ++
Sbjct: 1 MNGAVDPEREQALE---EYKRSLLDLR------EWEAKLKALRMGIKDLQREFDISEENI 51
Query: 87 KALQSVGQVSLSTSVSKC--WTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLT 144
KALQSVGQ+ + + + IVKA++GPRYVVGCR ++D++KLK GTRVALDMTTLT
Sbjct: 52 KALQSVGQI-IGEVLKQLDEERFIVKASSGPRYVVGCRSKVDRSKLKQGTRVALDMTTLT 110
Query: 145 IMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITP 204
IMR LPREVDPLVYNMS EDPG I ++ IGGL++QIRELREVIELPL NPELFQRVGI P
Sbjct: 111 IMRMLPREVDPLVYNMSLEDPGQINFAGIGGLNDQIRELREVIELPLKNPELFQRVGIKP 170
Query: 205 PKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
PKG LLYGPPGTGKTLLARAVAS ++ NFLKVVSS V
Sbjct: 171 PKGVLLYGPPGTGKTLLARAVASSMETNFLKVVSSAIV 208
Score = 135 (52.6 bits), Expect = 6.7e-73, Sum P(2) = 6.7e-73
Identities = 30/62 (48%), Positives = 43/62 (69%)
Query: 442 DFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLD 501
DF ++V K+SD + TEAGLFAI+ R+ + Q+DF +AVRKV++ KKLE KL+
Sbjct: 331 DF-ESVVKMSDGLNGADLRNVVTEAGLFAIKDYRDAINQDDFNRAVRKVAEAKKLEGKLE 389
Query: 502 YK 503
Y+
Sbjct: 390 YQ 391
Score = 122 (48.0 bits), Expect = 1.7e-88, Sum P(2) = 1.7e-88
Identities = 27/69 (39%), Positives = 46/69 (66%)
Query: 6 VDEVRHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLL 65
VD R + L++Y++ L + E E +L+ +R +K+L +++D SE ++KALQSVGQ ++
Sbjct: 5 VDPEREQALEEYKRSLLDLREWEAKLKALRMGIKDLQREFDISEENIKALQSVGQ---II 61
Query: 66 HCVREQLKE 74
V +QL E
Sbjct: 62 GEVLKQLDE 70
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 787 (282.1 bits), Expect = 5.0e-89, Sum P(2) = 5.0e-89
Identities = 153/183 (83%), Positives = 164/183 (89%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + VIELPL NPELF RVGI PPKG LLYGPPGTGKTLLARAVA+ L NFLKVVSSAI
Sbjct: 143 ELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAI 202
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESAR+IREMF YA+ H+PC+IFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ
Sbjct: 203 VDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 262
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
MDGFD LGQ K+IMATNRPDTLDPALLRPGRLDRKIEIPLPNE R+EILKIH ++K
Sbjct: 263 MDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQ 322
Query: 681 GEI 683
GEI
Sbjct: 323 GEI 325
Score = 722 (259.2 bits), Expect = 2.6e-132, Sum P(2) = 2.6e-132
Identities = 145/208 (69%), Positives = 163/208 (78%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R L + SSAIVDKYIGESAR+IREMF YA+ H+PC+IFMDEIDAIGGRR
Sbjct: 182 LARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRR 241
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
FSEGTSADREIQRTLMELLNQMDGFD LGQ K+IMATNRPDTLDPALLRPGRLDRKIEIP
Sbjct: 242 FSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIP 301
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNE R+ + IH ++K GEIDYEA+VKL+D NGADLRNV TEAG AI+ +R
Sbjct: 302 LPNEVGRMEI---LKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDR 358
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYR 463
+YV Q D M A RKV+D KKL+ Y+
Sbjct: 359 DYVIQSDLMSAARKVADLKKLEGTIDYQ 386
Score = 596 (214.9 bits), Expect = 2.6e-132, Sum P(2) = 2.6e-132
Identities = 119/172 (69%), Positives = 143/172 (83%)
Query: 73 KELTKQYDKSENDLKALQSVGQVSLSTSVSKCWT--VIVKATNGPRYVVGCRRQLDKAKL 130
++L K+YDK+E+D+K+LQSVGQ+ + + + + IVKA++GPRYVVGCR +D++ L
Sbjct: 33 RDLVKKYDKTEDDIKSLQSVGQI-IGEVLKQLDSERFIVKASSGPRYVVGCRNNVDQSHL 91
Query: 131 KSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELP 190
G RV+LDMTTLTIMR LPREVDPLVYNMS EDPGDI+++ +GGL+EQIRELREVIELP
Sbjct: 92 VQGVRVSLDMTTLTIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELP 151
Query: 191 LLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
L NPELF RVGI PPKG LLYGPPGTGKTLLARAVA+ L NFLKVVSS V
Sbjct: 152 LKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIV 203
Score = 125 (49.1 bits), Expect = 2.6e-69, Sum P(2) = 2.6e-69
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 445 KAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYK 503
+A+ K++D + TEAG AI+ +R+YV Q D M A RKV+D KKLE +DY+
Sbjct: 328 EALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMSAARKVADLKKLEGTIDYQ 386
Score = 121 (47.7 bits), Expect = 5.0e-89, Sum P(2) = 5.0e-89
Identities = 22/51 (43%), Positives = 37/51 (72%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQ 60
R L+ Y+ L +H E + +L+++R ++L K+YDK+E+D+K+LQSVGQ
Sbjct: 4 RDTALEKYKSYLLQHREWDSKLKDLRFGNRDLVKKYDKTEDDIKSLQSVGQ 54
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 789 (282.8 bits), Expect = 9.1e-88, Sum P(2) = 9.1e-88
Identities = 155/205 (75%), Positives = 174/205 (84%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + V+ELPL+ PELF RVGI PKG LLYGPPGTGKTLLARA+AS L+ANFLKVVSSAI
Sbjct: 148 ELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASNLEANFLKVVSSAI 207
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESAR+IREMF YAR+HQPC+IFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ
Sbjct: 208 VDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 267
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
MDGFD+L +VK+IMATNRPD LDPALLRPGRLDRKIEIPLPNE R+++LKIHA I KH
Sbjct: 268 MDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAGRVDVLKIHAANITKH 327
Query: 681 GEIG-DAATKWVLPFTAGGFIYIAT 704
G++ +A K F A + T
Sbjct: 328 GDVDYEAIAKLADGFNAADLRNVCT 352
Score = 772 (276.8 bits), Expect = 2.0e-130, Sum P(2) = 2.0e-130
Identities = 150/202 (74%), Positives = 170/202 (84%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R +LE + SSAIVDKYIGESAR+IREMF YAR+HQPC+IFMDEIDAIGGRR
Sbjct: 187 LARAIASNLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGRR 246
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
FSEGTSADREIQRTLMELLNQMDGFD+L +VK+IMATNRPD LDPALLRPGRLDRKIEIP
Sbjct: 247 FSEGTSADREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIP 306
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNE R+ + IHA I KHG++DYEA+ KL+D FN ADLRNVCTEAG+FAIR+ER
Sbjct: 307 LPNEAGRVD---VLKIHAANITKHGDVDYEAIAKLADGFNAADLRNVCTEAGMFAIRAER 363
Query: 436 EYVTQEDFMKAVRKVSDNKKLD 457
+YV +EDFMKAVRK + KKL+
Sbjct: 364 DYVMEEDFMKAVRKCQEAKKLE 385
Score = 528 (190.9 bits), Expect = 2.0e-130, Sum P(2) = 2.0e-130
Identities = 113/206 (54%), Positives = 143/206 (69%)
Query: 40 ELTKQYDKSENDLKALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQV--SL 97
E TK+ +N L +L L+ E +K+L K + K+E+ +K +Q +G++ +
Sbjct: 4 EETKKEQALQNYRDRLIEHKNAELRLNKAHELIKKLKKDFQKTEDHIKTIQYIGEIIGEV 63
Query: 98 STSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLK-SGTRVALDMTTLTIMRYLPREVDPL 156
S+ + IVKA NGPRYVV C DKA L G RV LD+TTLTI++ LPREVDP+
Sbjct: 64 LRSLDE-ERFIVKACNGPRYVVRCANYQDKAHLLVPGARVTLDLTTLTILKILPREVDPI 122
Query: 157 VYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGT 216
++NM+ E PG ++Y IGGLS QIRELREV+ELPL+ PELF RVGI PKG LLYGPPGT
Sbjct: 123 IFNMTAESPGSVSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGT 182
Query: 217 GKTLLARAVASQLDANFLKVVSSLFV 242
GKTLLARA+AS L+ANFLKVVSS V
Sbjct: 183 GKTLLARAIASNLEANFLKVVSSAIV 208
Score = 164 (62.8 bits), Expect = 2.9e-66, Sum P(2) = 2.9e-66
Identities = 33/61 (54%), Positives = 44/61 (72%)
Query: 445 KAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKP 504
+A+ K++D + TEAG+FAIR+ER+YV +EDFMKAVRK + KKLE KLDY+
Sbjct: 333 EAIAKLADGFNAADLRNVCTEAGMFAIRAERDYVMEEDFMKAVRKCQEAKKLEGKLDYQK 392
Query: 505 V 505
V
Sbjct: 393 V 393
Score = 107 (42.7 bits), Expect = 9.1e-88, Sum P(2) = 9.1e-88
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQ 60
+ + LQ+YR +L EH E RL + E +K+L K + K+E+ +K +Q +G+
Sbjct: 8 KEQALQNYRDRLIEHKNAELRLNKAHELIKKLKKDFQKTEDHIKTIQYIGE 58
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 754 (270.5 bits), Expect = 2.7e-88, Sum P(2) = 2.7e-88
Identities = 146/190 (76%), Positives = 163/190 (85%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + VIELPL NPE+FQRVGI PPKG LLYGPPGTGKTLLA+AVA+ + ANF+ +S I
Sbjct: 192 ELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGI 251
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESAR+IREMF YA+ H+PCIIFMDE+DAIGGRRFSEGTSADREIQRTLMELL Q
Sbjct: 252 VDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQ 311
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
MDGFD+LGQ K+IMATNRPDTLDPALLRPGRLDRK+EIPLPNE RLEI KIH + K
Sbjct: 312 MDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKT 371
Query: 681 GEIG-DAATK 689
GE +AA K
Sbjct: 372 GEFDFEAAVK 381
Score = 706 (253.6 bits), Expect = 3.4e-128, Sum P(2) = 3.4e-128
Identities = 136/191 (71%), Positives = 157/191 (82%)
Query: 273 SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLME 332
+S IVDKYIGESAR+IREMF YA+ H+PCIIFMDE+DAIGGRRFSEGTSADREIQRTLME
Sbjct: 248 ASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLME 307
Query: 333 LLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIH 392
LL QMDGFD+LGQ K+IMATNRPDTLDPALLRPGRLDRK+EIPLPNE RL IH
Sbjct: 308 LLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEI---FKIH 364
Query: 393 AGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSD 452
+ K GE D+EA VK+SD FNGAD+RN TEAG FAIR +R+++ +D MKAVRKV++
Sbjct: 365 TAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMKAVRKVAE 424
Query: 453 NKKLDHCNSYR 463
KKL+ Y+
Sbjct: 425 VKKLEGTIEYQ 435
Score = 573 (206.8 bits), Expect = 3.4e-128, Sum P(2) = 3.4e-128
Identities = 120/225 (53%), Positives = 160/225 (71%)
Query: 13 TLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKA-LQSVGQHDLLLHCVREQ 71
T Q + ++ + E E E ++ + ++K+ N K L ++D L R+
Sbjct: 21 TQQSHEQQPEQPQETEEHHEEEPSRVDPEQEAHNKALNQFKRKLLEHRRYDDQLKQRRQN 80
Query: 72 LKELTKQYDKSENDLKALQSVGQV--SLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAK 129
+++L K YDK+END+KALQS+GQ+ + +S+ IVKA++GPRY+VG R +D++K
Sbjct: 81 IRDLEKLYDKTENDIKALQSIGQLIGEVMKELSE-EKYIVKASSGPRYIVGVRNSVDRSK 139
Query: 130 LKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIEL 189
LK G RV LD+TTLTIMR LPRE DPLVYNM+ + G+IT+ IGGL+EQIRELREVIEL
Sbjct: 140 LKKGVRVTLDITTLTIMRILPRETDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVIEL 199
Query: 190 PLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFL 234
PL NPE+FQRVGI PPKG LLYGPPGTGKTLLA+AVA+ + ANF+
Sbjct: 200 PLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFI 244
Score = 147 (56.8 bits), Expect = 2.7e-88, Sum P(2) = 2.7e-88
Identities = 28/71 (39%), Positives = 48/71 (67%)
Query: 8 EVRHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHC 67
E +K L +++KL EH + +L++ R+ +++L K YDK+END+KALQS+GQ
Sbjct: 51 EAHNKALNQFKRKLLEHRRYDDQLKQRRQNIRDLEKLYDKTENDIKALQSIGQ------L 104
Query: 68 VREQLKELTKQ 78
+ E +KEL+++
Sbjct: 105 IGEVMKELSEE 115
Score = 141 (54.7 bits), Expect = 1.4e-68, Sum P(2) = 1.4e-68
Identities = 36/83 (43%), Positives = 51/83 (61%)
Query: 425 EAG---LFAIRSEREYVTQE-DFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQ 480
EAG +F I + + T E DF AV K+SD + TEAG FAIR +R+++
Sbjct: 354 EAGRLEIFKIHTAKVKKTGEFDFEAAV-KMSDGFNGADIRNCATEAGFFAIRDDRDHINP 412
Query: 481 EDFMKAVRKVSDNKKLESKLDYK 503
+D MKAVRKV++ KKLE ++Y+
Sbjct: 413 DDLMKAVRKVAEVKKLEGTIEYQ 435
Score = 38 (18.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 32 REMREQLKELTKQYDKSEN--DLKALQSVGQHDLL 64
RE++ L EL Q D +N K + + + D L
Sbjct: 299 REIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTL 333
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 753 (270.1 bits), Expect = 5.0e-87, Sum P(2) = 5.0e-87
Identities = 142/181 (78%), Positives = 163/181 (90%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+ELP+LNP L++RVGI PKG LLYGPPGTGKTLLARA+AS ++ NF+++V SAIVD
Sbjct: 150 REVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVD 209
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KYIGESAR+IREMFNYA+ HQPCIIFMDEIDAIGGRRFS+GTSADREIQRTLMELLN +D
Sbjct: 210 KYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNHLD 269
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
GF+ LG VK+IMATNRPD LDPAL+RPGRLDRKIEIPLPNE AR+EILKIHA + K G+
Sbjct: 270 GFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETARIEILKIHANKMTKLGD 329
Query: 683 I 683
I
Sbjct: 330 I 330
Score = 732 (262.7 bits), Expect = 3.1e-125, Sum P(2) = 3.1e-125
Identities = 142/202 (70%), Positives = 165/202 (81%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R ++ + SAIVDKYIGESAR+IREMFNYA+ HQPCIIFMDEIDAIGGRR
Sbjct: 187 LARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRR 246
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
FS+GTSADREIQRTLMELLN +DGF+ LG VK+IMATNRPD LDPAL+RPGRLDRKIEIP
Sbjct: 247 FSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIP 306
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNE AR+ + IHA + K G+IDYE+V +L D FNGADLRNVCTEAG+FAIR+ R
Sbjct: 307 LPNETARIEI---LKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMR 363
Query: 436 EYVTQEDFMKAVRKVSDNKKLD 457
+YV +EDF KA RK+S+ KKL+
Sbjct: 364 DYVIEEDFYKAARKISEGKKLE 385
Score = 519 (187.8 bits), Expect = 3.1e-125, Sum P(2) = 3.1e-125
Identities = 105/183 (57%), Positives = 141/183 (77%)
Query: 68 VREQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKCWT--VIVKATNGPRYVVGCRRQL 125
+R +KEL K+Y+K+E++LKALQSVGQ+ + + + IVKA++GPRYVVGC+ ++
Sbjct: 27 LRLDIKELNKKYEKTEDNLKALQSVGQI-IGQVLKQLEDEKFIVKASSGPRYVVGCKSKI 85
Query: 126 DKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNM------SHEDPGDITYSAIGGLSEQ 179
+K+KL GTRV+LDMTTLT+M+ LP EVDPLV+NM S + Y+ IGGLSEQ
Sbjct: 86 NKSKLVIGTRVSLDMTTLTVMKRLPCEVDPLVFNMISDIDKSENSTNKVNYNQIGGLSEQ 145
Query: 180 IRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 239
IR++REV+ELP+LNP L++RVGI PKG LLYGPPGTGKTLLARA+AS ++ NF+++V S
Sbjct: 146 IRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVS 205
Query: 240 LFV 242
V
Sbjct: 206 AIV 208
Score = 141 (54.7 bits), Expect = 8.4e-63, Sum P(2) = 8.4e-63
Identities = 25/42 (59%), Positives = 35/42 (83%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKPV 505
TEAG+FAIR+ R+YV +EDF KA RK+S+ KKLE K++Y+ +
Sbjct: 352 TEAGMFAIRAMRDYVIEEDFYKAARKISEGKKLEGKIEYEKI 393
Score = 136 (52.9 bits), Expect = 5.0e-87, Sum P(2) = 5.0e-87
Identities = 27/63 (42%), Positives = 49/63 (77%)
Query: 12 KTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQ 71
++++ Y KK+ EH E+E +++++R +KEL K+Y+K+E++LKALQSVGQ ++ V +Q
Sbjct: 5 ESIKLYVKKVIEHREIESKVKKLRLDIKELNKKYEKTEDNLKALQSVGQ---IIGQVLKQ 61
Query: 72 LKE 74
L++
Sbjct: 62 LED 64
Score = 38 (18.4 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
Identities = 10/33 (30%), Positives = 21/33 (63%)
Query: 480 QEDFMKAVRKVSDNKKLESKLDYKPVIELPLLN 512
+E V+KV +++++ESK+ K +++ LN
Sbjct: 4 KESIKLYVKKVIEHREIESKVK-KLRLDIKELN 35
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 753 (270.1 bits), Expect = 5.0e-87, Sum P(2) = 5.0e-87
Identities = 142/181 (78%), Positives = 163/181 (90%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+ELP+LNP L++RVGI PKG LLYGPPGTGKTLLARA+AS ++ NF+++V SAIVD
Sbjct: 150 REVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVD 209
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KYIGESAR+IREMFNYA+ HQPCIIFMDEIDAIGGRRFS+GTSADREIQRTLMELLN +D
Sbjct: 210 KYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNHLD 269
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
GF+ LG VK+IMATNRPD LDPAL+RPGRLDRKIEIPLPNE AR+EILKIHA + K G+
Sbjct: 270 GFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETARIEILKIHANKMTKLGD 329
Query: 683 I 683
I
Sbjct: 330 I 330
Score = 732 (262.7 bits), Expect = 3.1e-125, Sum P(2) = 3.1e-125
Identities = 142/202 (70%), Positives = 165/202 (81%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R ++ + SAIVDKYIGESAR+IREMFNYA+ HQPCIIFMDEIDAIGGRR
Sbjct: 187 LARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRR 246
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
FS+GTSADREIQRTLMELLN +DGF+ LG VK+IMATNRPD LDPAL+RPGRLDRKIEIP
Sbjct: 247 FSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIP 306
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNE AR+ + IHA + K G+IDYE+V +L D FNGADLRNVCTEAG+FAIR+ R
Sbjct: 307 LPNETARIEI---LKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMR 363
Query: 436 EYVTQEDFMKAVRKVSDNKKLD 457
+YV +EDF KA RK+S+ KKL+
Sbjct: 364 DYVIEEDFYKAARKISEGKKLE 385
Score = 519 (187.8 bits), Expect = 3.1e-125, Sum P(2) = 3.1e-125
Identities = 105/183 (57%), Positives = 141/183 (77%)
Query: 68 VREQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKCWT--VIVKATNGPRYVVGCRRQL 125
+R +KEL K+Y+K+E++LKALQSVGQ+ + + + IVKA++GPRYVVGC+ ++
Sbjct: 27 LRLDIKELNKKYEKTEDNLKALQSVGQI-IGQVLKQLEDEKFIVKASSGPRYVVGCKSKI 85
Query: 126 DKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNM------SHEDPGDITYSAIGGLSEQ 179
+K+KL GTRV+LDMTTLT+M+ LP EVDPLV+NM S + Y+ IGGLSEQ
Sbjct: 86 NKSKLVIGTRVSLDMTTLTVMKRLPCEVDPLVFNMISDIDKSENSTNKVNYNQIGGLSEQ 145
Query: 180 IRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 239
IR++REV+ELP+LNP L++RVGI PKG LLYGPPGTGKTLLARA+AS ++ NF+++V S
Sbjct: 146 IRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVS 205
Query: 240 LFV 242
V
Sbjct: 206 AIV 208
Score = 141 (54.7 bits), Expect = 8.4e-63, Sum P(2) = 8.4e-63
Identities = 25/42 (59%), Positives = 35/42 (83%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKPV 505
TEAG+FAIR+ R+YV +EDF KA RK+S+ KKLE K++Y+ +
Sbjct: 352 TEAGMFAIRAMRDYVIEEDFYKAARKISEGKKLEGKIEYEKI 393
Score = 136 (52.9 bits), Expect = 5.0e-87, Sum P(2) = 5.0e-87
Identities = 27/63 (42%), Positives = 49/63 (77%)
Query: 12 KTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQ 71
++++ Y KK+ EH E+E +++++R +KEL K+Y+K+E++LKALQSVGQ ++ V +Q
Sbjct: 5 ESIKLYVKKVIEHREIESKVKKLRLDIKELNKKYEKTEDNLKALQSVGQ---IIGQVLKQ 61
Query: 72 LKE 74
L++
Sbjct: 62 LED 64
Score = 38 (18.4 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
Identities = 10/33 (30%), Positives = 21/33 (63%)
Query: 480 QEDFMKAVRKVSDNKKLESKLDYKPVIELPLLN 512
+E V+KV +++++ESK+ K +++ LN
Sbjct: 4 KESIKLYVKKVIEHREIESKVK-KLRLDIKELN 35
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 882 (315.5 bits), Expect = 1.3e-109, Sum P(2) = 1.3e-109
Identities = 174/183 (95%), Positives = 178/183 (97%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + VIELPLLNPELF RVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI
Sbjct: 152 ELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 211
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ
Sbjct: 212 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 271
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
MDGFDSLGQVKMIMATNRPD+LDPALLRPGRLDRKIEIPLPNEQARLEILKIHA IAKH
Sbjct: 272 MDGFDSLGQVKMIMATNRPDSLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKH 331
Query: 681 GEI 683
GEI
Sbjct: 332 GEI 334
Score = 852 (305.0 bits), Expect = 1.9e-106, Sum P(2) = 1.9e-106
Identities = 172/208 (82%), Positives = 182/208 (87%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R L+ + SSAIVDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAIGGRR
Sbjct: 191 LARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 250
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPD+LDPALLRPGRLDRKIEIP
Sbjct: 251 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDSLDPALLRPGRLDRKIEIP 310
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNEQARL + IHA IAKHGEIDYEA+VKLSD+FNGADLRNVCTEAGLFAIR+ER
Sbjct: 311 LPNEQARLEI---LKIHALKIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAER 367
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYR 463
EYV Q DFMKAVRKVSDNKKL+ Y+
Sbjct: 368 EYVIQGDFMKAVRKVSDNKKLESKLDYK 395
Score = 760 (272.6 bits), Expect = 3.8e-95, Sum P(2) = 3.8e-95
Identities = 168/266 (63%), Positives = 189/266 (71%)
Query: 69 REQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKCWT---VIVKATNGPRYVVGCRRQL 125
RE++K+LTK YDKSENDLKALQSVGQ+ V K T IVKATNGPRYVVGCRRQL
Sbjct: 38 REEIKDLTKLYDKSENDLKALQSVGQIV--GEVLKQLTEDKFIVKATNGPRYVVGCRRQL 95
Query: 126 DKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELRE 185
DKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGD+TYSAIGGL++QIRELRE
Sbjct: 96 DKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVTYSAIGGLTDQIRELRE 155
Query: 186 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSK 245
VIELPLLNPELF RVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS V
Sbjct: 156 VIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKY 215
Query: 246 EDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFM 305
+ + ++ + H F AI + E RE+ R + M
Sbjct: 216 IGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREI---QRTLMELLNQM 272
Query: 306 DEIDAIGGRRFSEGTSADREIQRTLM 331
D D++G + T+ + L+
Sbjct: 273 DGFDSLGQVKMIMATNRPDSLDPALL 298
Score = 221 (82.9 bits), Expect = 1.3e-109, Sum P(2) = 1.3e-109
Identities = 47/75 (62%), Positives = 57/75 (76%)
Query: 3 TPVVDEVRHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHD 62
TP+ D +R K L +YRKKL EH E+EGRL+E RE++K+LTK YDKSENDLKALQSVGQ
Sbjct: 6 TPMPDNLRVKALSEYRKKLLEHKEIEGRLKEKREEIKDLTKLYDKSENDLKALQSVGQ-- 63
Query: 63 LLLHCVREQLKELTK 77
V E LK+LT+
Sbjct: 64 ----IVGEVLKQLTE 74
Score = 206 (77.6 bits), Expect = 3.8e-95, Sum P(2) = 3.8e-95
Identities = 44/61 (72%), Positives = 49/61 (80%)
Query: 445 KAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKP 504
+A+ K+SDN + TEAGLFAIR+EREYV Q DFMKAVRKVSDNKKLESKLDYKP
Sbjct: 337 EAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQGDFMKAVRKVSDNKKLESKLDYKP 396
Query: 505 V 505
V
Sbjct: 397 V 397
>UNIPROTKB|H0YJC0 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0017111
EMBL:AL133453 HGNC:HGNC:9553 Ensembl:ENST00000556813 Uniprot:H0YJC0
Length = 262
Score = 747 (268.0 bits), Expect = 1.9e-104, Sum P(3) = 1.9e-104
Identities = 159/201 (79%), Positives = 168/201 (83%)
Query: 46 DKSENDL-KALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKC 104
DK+ D K L + D L +REQLKELTKQY+KSENDLKALQSVGQ+ V K
Sbjct: 6 DKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIV--GEVLKQ 63
Query: 105 WT---VIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMS 161
T IVKATNGPRYVVGCRRQLDK+KLK GTRVALDMTTLTIMRYLPREVDPLVYNMS
Sbjct: 64 LTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMS 123
Query: 162 HEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLL 221
HEDPG+++YS IGGLSEQIRELREVIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLL
Sbjct: 124 HEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLL 183
Query: 222 ARAVASQLDANFLKVVSSLFV 242
ARAVASQLD NFLKVVSS V
Sbjct: 184 ARAVASQLDCNFLKVVSSSIV 204
Score = 445 (161.7 bits), Expect = 6.2e-63, Sum P(2) = 6.2e-63
Identities = 86/95 (90%), Positives = 90/95 (94%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + VIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLLARAVASQLD NFLKVVSS+I
Sbjct: 144 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 203
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI 595
VDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAI
Sbjct: 204 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI 238
Score = 227 (85.0 bits), Expect = 6.2e-63, Sum P(2) = 6.2e-63
Identities = 48/69 (69%), Positives = 56/69 (81%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVR 69
R K LQDYRKKL EH E++GRL+E+REQLKELTKQY+KSENDLKALQSVGQ V
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQ------IVG 58
Query: 70 EQLKELTKQ 78
E LK+LT++
Sbjct: 59 EVLKQLTEE 67
Score = 199 (75.1 bits), Expect = 1.9e-104, Sum P(3) = 1.9e-104
Identities = 40/56 (71%), Positives = 44/56 (78%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI 311
L R L+ + SS+IVDKYIGESARLIREMFNYAR+HQPCIIFMDEIDAI
Sbjct: 183 LARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI 238
Score = 122 (48.0 bits), Expect = 1.9e-104, Sum P(3) = 1.9e-104
Identities = 23/25 (92%), Positives = 24/25 (96%)
Query: 402 IDYEAVVKLSDSFNGADLRNVCTEA 426
IDYEA+VKLSD FNGADLRNVCTEA
Sbjct: 238 IDYEAIVKLSDGFNGADLRNVCTEA 262
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 853 (305.3 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 167/205 (81%), Positives = 184/205 (89%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + V+ELPL+NPELF+RVGITPPKGCLL+GPPGTGKTLLARAVASQLD NFLKVVSSAI
Sbjct: 161 ELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAI 220
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESAR+IREMFNYAR+HQPCI+FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ
Sbjct: 221 VDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 280
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
+DGFDSLG+VK+IMATNRPDTLDPALLRPGRLDRKIEI LPNEQ+RLEILKIH+ I KH
Sbjct: 281 LDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKH 340
Query: 681 GEIG-DAATKWVLPFTAGGFIYIAT 704
GEI +A K F+A + T
Sbjct: 341 GEIDFEAVVKLSDGFSAADLRNVCT 365
Score = 790 (283.2 bits), Expect = 3.4e-94, Sum P(2) = 3.4e-94
Identities = 157/208 (75%), Positives = 176/208 (84%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R L+ + SSAIVDKYIGESAR+IREMFNYAR+HQPCI+FMDEIDAIGGRR
Sbjct: 200 LARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRR 259
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
FSEGTSADREIQRTLMELLNQ+DGFDSLG+VK+IMATNRPDTLDPALLRPGRLDRKIEI
Sbjct: 260 FSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIG 319
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNEQ+RL + IH+ I KHGEID+EAVVKLSD F+ ADLRNVCTEAG+FAIR+ER
Sbjct: 320 LPNEQSRLEI---LKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAER 376
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYR 463
E+V EDFMKAVRKV D K+L+ Y+
Sbjct: 377 EFVIDEDFMKAVRKVGDAKRLETKLDYK 404
Score = 686 (246.5 bits), Expect = 4.0e-85, Sum P(2) = 4.0e-85
Identities = 151/275 (54%), Positives = 187/275 (68%)
Query: 40 ELTKQYDKSENDLKALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQV--SL 97
E TK + L + + Q L +R++ E+TKQ+DKSEND+K+LQSVGQ+ +
Sbjct: 21 ERTKALNSYRRKLAECRDIEQK---LKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEV 77
Query: 98 STSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLV 157
+S+ IVKATNGPRYVVGCRR ++K +LK GTRV+LDMTTLTIMR LPREVDPLV
Sbjct: 78 LKQLSE-EKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLV 136
Query: 158 YNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTG 217
Y MSHEDPG+I+YS +GGL+EQIRELREV+ELPL+NPELF+RVGITPPKGCLL+GPPGTG
Sbjct: 137 YKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTG 196
Query: 218 KTLLARAVASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIV 277
KTLLARAVASQLD NFLKVVSS V + M ++ + H F AI
Sbjct: 197 KTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIG 256
Query: 278 DKYIGESARLIREMFNYARNHQPCIIFMDEIDAIG 312
+ E RE+ R + +D D++G
Sbjct: 257 GRRFSEGTSADREI---QRTLMELLNQLDGFDSLG 288
Score = 185 (70.2 bits), Expect = 4.0e-85, Sum P(2) = 4.0e-85
Identities = 40/64 (62%), Positives = 48/64 (75%)
Query: 442 DFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLD 501
DF +AV K+SD + TEAG+FAIR+ERE+V EDFMKAVRKV D K+LE+KLD
Sbjct: 344 DF-EAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKRLETKLD 402
Query: 502 YKPV 505
YKPV
Sbjct: 403 YKPV 406
Score = 167 (63.8 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 36/78 (46%), Positives = 56/78 (71%)
Query: 2 TTP-VVDEVRHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQ 60
T P +V++ R K L YR+KL E ++E +L+++R++ E+TKQ+DKSEND+K+LQSVGQ
Sbjct: 13 TGPAIVEDERTKALNSYRRKLAECRDIEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQ 72
Query: 61 HDLLLHCVREQLKELTKQ 78
V E LK+L+++
Sbjct: 73 ------IVGEVLKQLSEE 84
Score = 38 (18.4 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 6/22 (27%), Positives = 15/22 (68%)
Query: 7 DEVRHKTLQDYRKKLTEHAEVE 28
++ R + L+ + K+T+H E++
Sbjct: 323 EQSRLEILKIHSNKITKHGEID 344
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 853 (305.3 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 167/205 (81%), Positives = 184/205 (89%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + V+ELPL+NPELF+RVGITPPKGCLL+GPPGTGKTLLARAVASQLD NFLKVVSSAI
Sbjct: 161 ELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAI 220
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESAR+IREMFNYAR+HQPCI+FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ
Sbjct: 221 VDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 280
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
+DGFDSLG+VK+IMATNRPDTLDPALLRPGRLDRKIEI LPNEQ+RLEILKIH+ I KH
Sbjct: 281 LDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKH 340
Query: 681 GEIG-DAATKWVLPFTAGGFIYIAT 704
GEI +A K F+A + T
Sbjct: 341 GEIDFEAVVKLSDGFSAADLRNVCT 365
Score = 790 (283.2 bits), Expect = 3.4e-94, Sum P(2) = 3.4e-94
Identities = 157/208 (75%), Positives = 176/208 (84%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R L+ + SSAIVDKYIGESAR+IREMFNYAR+HQPCI+FMDEIDAIGGRR
Sbjct: 200 LARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRR 259
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
FSEGTSADREIQRTLMELLNQ+DGFDSLG+VK+IMATNRPDTLDPALLRPGRLDRKIEI
Sbjct: 260 FSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIG 319
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNEQ+RL + IH+ I KHGEID+EAVVKLSD F+ ADLRNVCTEAG+FAIR+ER
Sbjct: 320 LPNEQSRLEI---LKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAER 376
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYR 463
E+V EDFMKAVRKV D K+L+ Y+
Sbjct: 377 EFVIDEDFMKAVRKVGDAKRLETKLDYK 404
Score = 686 (246.5 bits), Expect = 4.0e-85, Sum P(2) = 4.0e-85
Identities = 151/275 (54%), Positives = 187/275 (68%)
Query: 40 ELTKQYDKSENDLKALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQV--SL 97
E TK + L + + Q L +R++ E+TKQ+DKSEND+K+LQSVGQ+ +
Sbjct: 21 ERTKALNSYRRKLAECRDIEQK---LKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEV 77
Query: 98 STSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLV 157
+S+ IVKATNGPRYVVGCRR ++K +LK GTRV+LDMTTLTIMR LPREVDPLV
Sbjct: 78 LKQLSE-EKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLV 136
Query: 158 YNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTG 217
Y MSHEDPG+I+YS +GGL+EQIRELREV+ELPL+NPELF+RVGITPPKGCLL+GPPGTG
Sbjct: 137 YKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTG 196
Query: 218 KTLLARAVASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIV 277
KTLLARAVASQLD NFLKVVSS V + M ++ + H F AI
Sbjct: 197 KTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIG 256
Query: 278 DKYIGESARLIREMFNYARNHQPCIIFMDEIDAIG 312
+ E RE+ R + +D D++G
Sbjct: 257 GRRFSEGTSADREI---QRTLMELLNQLDGFDSLG 288
Score = 185 (70.2 bits), Expect = 4.0e-85, Sum P(2) = 4.0e-85
Identities = 40/64 (62%), Positives = 48/64 (75%)
Query: 442 DFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLD 501
DF +AV K+SD + TEAG+FAIR+ERE+V EDFMKAVRKV D K+LE+KLD
Sbjct: 344 DF-EAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKRLETKLD 402
Query: 502 YKPV 505
YKPV
Sbjct: 403 YKPV 406
Score = 167 (63.8 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 36/78 (46%), Positives = 56/78 (71%)
Query: 2 TTP-VVDEVRHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQ 60
T P +V++ R K L YR+KL E ++E +L+++R++ E+TKQ+DKSEND+K+LQSVGQ
Sbjct: 13 TGPAIVEDERTKALNSYRRKLAECRDIEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQ 72
Query: 61 HDLLLHCVREQLKELTKQ 78
V E LK+L+++
Sbjct: 73 ------IVGEVLKQLSEE 84
Score = 38 (18.4 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 6/22 (27%), Positives = 15/22 (68%)
Query: 7 DEVRHKTLQDYRKKLTEHAEVE 28
++ R + L+ + K+T+H E++
Sbjct: 323 EQSRLEILKIHSNKITKHGEID 344
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 844 (302.2 bits), Expect = 2.9e-99, Sum P(2) = 2.9e-99
Identities = 164/190 (86%), Positives = 178/190 (93%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + VIELPLLNP++F RVGI+PPKGCLLYGPPGTGKTLLARA+ASQ+DANFLKVVSSAI
Sbjct: 153 ELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQMDANFLKVVSSAI 212
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESARLIREMF YAR+HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ
Sbjct: 213 VDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 272
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
MDGFD+LGQVKMIMATNRPDTLDPALLRPGRLDRK+EIPLPNE AR++ILKIHA P+ K
Sbjct: 273 MDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVARMDILKIHAEPLNKR 332
Query: 681 GEIG-DAATK 689
GEI +A K
Sbjct: 333 GEIDYEAVVK 342
Score = 814 (291.6 bits), Expect = 4.2e-96, Sum P(2) = 4.2e-96
Identities = 161/208 (77%), Positives = 178/208 (85%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R ++ + SSAIVDKYIGESARLIREMF YAR+HQPCIIFMDEIDAIGGRR
Sbjct: 192 LARAIASQMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRR 251
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
FSEGTSADREIQRTLMELLNQMDGFD+LGQVKMIMATNRPDTLDPALLRPGRLDRK+EIP
Sbjct: 252 FSEGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIP 311
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNE AR+ + IHA P+ K GEIDYEAVVKLSD FNGADLRN+CTEAGLFA+R +R
Sbjct: 312 LPNEVARMDI---LKIHAEPLNKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALRCDR 368
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYR 463
E+V QEDFMKAVRK++DNKKL+ Y+
Sbjct: 369 EFVIQEDFMKAVRKIADNKKLESRLDYK 396
Score = 674 (242.3 bits), Expect = 5.7e-84, Sum P(2) = 5.7e-84
Identities = 145/251 (57%), Positives = 177/251 (70%)
Query: 65 LHCVREQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKCWT---VIVKATNGPRYVVGC 121
L +R++ K + +Y+KSE+DLKALQSVGQ + + K T IVKA+NGPRYVVGC
Sbjct: 35 LKALRDKYKVVNAEYEKSEDDLKALQSVGQ--MVGEILKQLTPDNFIVKASNGPRYVVGC 92
Query: 122 RRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIR 181
RRQ++K KLK GTRVALD+TTLTIMRYLPREVDPLVYNM+HEDPG++ Y+ IGGL +QIR
Sbjct: 93 RRQINKEKLKPGTRVALDVTTLTIMRYLPREVDPLVYNMTHEDPGNVNYAEIGGLGQQIR 152
Query: 182 ELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLF 241
ELREVIELPLLNP++F RVGI+PPKGCLLYGPPGTGKTLLARA+ASQ+DANFLKVVSS
Sbjct: 153 ELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQMDANFLKVVSSAI 212
Query: 242 VTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPC 301
V + + ++ + H F AI + E RE+ R
Sbjct: 213 VDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFSEGTSADREI---QRTLMEL 269
Query: 302 IIFMDEIDAIG 312
+ MD DA+G
Sbjct: 270 LNQMDGFDALG 280
Score = 186 (70.5 bits), Expect = 5.7e-84, Sum P(2) = 5.7e-84
Identities = 38/61 (62%), Positives = 48/61 (78%)
Query: 445 KAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKP 504
+AV K+SD + TEAGLFA+R +RE+V QEDFMKAVRK++DNKKLES+LDYKP
Sbjct: 338 EAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFMKAVRKIADNKKLESRLDYKP 397
Query: 505 V 505
+
Sbjct: 398 I 398
Score = 161 (61.7 bits), Expect = 2.9e-99, Sum P(2) = 2.9e-99
Identities = 35/76 (46%), Positives = 50/76 (65%)
Query: 1 MTTPVVDEVRHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQ 60
+ P D+ R + L +YR KL EH E+E +L+ +R++ K + +Y+KSE+DLKALQSVGQ
Sbjct: 5 LANPPTDDERVRALTNYRTKLLEHREIESKLKALRDKYKVVNAEYEKSEDDLKALQSVGQ 64
Query: 61 HDLLLHCVREQLKELT 76
V E LK+LT
Sbjct: 65 ------MVGEILKQLT 74
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 834 (298.6 bits), Expect = 7.7e-97, Sum P(2) = 7.7e-97
Identities = 165/200 (82%), Positives = 176/200 (88%)
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
IELPL+NPELF RVGI PPKG LLYGPPGTGKTLLARA+AS +DANFLKVVSSAI+DKYI
Sbjct: 155 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYI 214
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 625
GESARLIREMFNYAR HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD
Sbjct: 215 GESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD 274
Query: 626 SLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGEIG- 684
+LG+VKMIMATNRPD LDPALLRPGRLDRKIEIPLPNEQ+R++ILKIHA IAKHGEI
Sbjct: 275 NLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDY 334
Query: 685 DAATKWVLPFTAGGFIYIAT 704
+A K F I T
Sbjct: 335 EAIVKLAEGFNGADLRNICT 354
Score = 817 (292.7 bits), Expect = 4.8e-95, Sum P(2) = 4.8e-95
Identities = 158/212 (74%), Positives = 181/212 (85%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R +++ + SSAI+DKYIGESARLIREMFNYAR HQPCIIFMDEIDAIGGRR
Sbjct: 189 LARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRR 248
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
FSEGTSADREIQRTLMELLNQ+DGFD+LG+VKMIMATNRPD LDPALLRPGRLDRKIEIP
Sbjct: 249 FSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIP 308
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNEQ+R+ + IHA IAKHGEIDYEA+VKL++ FNGADLRN+CTEAG+FAIR+ER
Sbjct: 309 LPNEQSRMDI---LKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAER 365
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAG 467
+YV EDFMKAVRK+S+ KKL+ + Y + G
Sbjct: 366 DYVIHEDFMKAVRKLSEAKKLESSSHYNADFG 397
Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
Identities = 162/378 (42%), Positives = 216/378 (57%)
Query: 48 SENDLKALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQV--SLSTSVSKCW 105
SE K LQ + + + RE L+ K+++K+E+DLK+LQSVGQ+ + +
Sbjct: 16 SEYRKKLLQHK-ELESRVRTARENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDN-E 73
Query: 106 TVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDP 165
+IVKA++GPRYVVGCR ++DK KL SGTRV LDMTTLTIMR LPREVDP+VYNM HEDP
Sbjct: 74 RLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDP 133
Query: 166 GDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAV 225
G+I+YSA+GGL +QIRELRE IELPL+NPELF RVGI PPKG LLYGPPGTGKTLLARA+
Sbjct: 134 GNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAI 193
Query: 226 ASQLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESA 285
AS +DANFLKVVSS + + + ++ + H F AI + E
Sbjct: 194 ASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGT 253
Query: 286 RLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQ 345
RE+ R + +D D +G + T+ + L+ + D +
Sbjct: 254 SADREI---QRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALL----RPGRLDRKIE 306
Query: 346 VKMIMATNRPDTLD---PALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEI 402
+ + +R D L + + G +D + + L E A I AG A E
Sbjct: 307 IPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLA-EGFNGADLRNICTEAGMFAIRAER 365
Query: 403 DY-------EAVVKLSDS 413
DY +AV KLS++
Sbjct: 366 DYVIHEDFMKAVRKLSEA 383
Score = 148 (57.2 bits), Expect = 7.7e-97, Sum P(2) = 7.7e-97
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 3 TPVVDEVRHKT--LQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQ 60
T V + VR +T + +YRKKL +H E+E R+R RE L+ K+++K+E+DLK+LQSVGQ
Sbjct: 2 TDVDESVRRRTAAVSEYRKKLLQHKELESRVRTARENLRGAKKEFNKTEDDLKSLQSVGQ 61
Score = 144 (55.7 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 39/107 (36%), Positives = 61/107 (57%)
Query: 396 IAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 455
+ + G +D + + L + + D+ + AG+ A E +Y +A+ K+++
Sbjct: 295 LLRPGRLDRKIEIPLPNEQSRMDILKIHA-AGI-AKHGEIDY-------EAIVKLAEGFN 345
Query: 456 LDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDY 502
+ TEAG+FAIR+ER+YV EDFMKAVRK+S+ KKLES Y
Sbjct: 346 GADLRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSSHY 392
Score = 42 (19.8 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 32 REMREQLKELTKQYDKSEN--DLKALQSVGQHDLL 64
RE++ L EL Q D +N +K + + + D+L
Sbjct: 257 REIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVL 291
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 753 (270.1 bits), Expect = 1.2e-87, Sum P(2) = 1.2e-87
Identities = 149/190 (78%), Positives = 163/190 (85%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + VIELPL NPELF RVGI PPKG LLYGPPGTGKTLLA+AVA+ + ANF+ +SAI
Sbjct: 183 ELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASAI 242
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
VDKYIGESARLIREMF YA+ H+PCIIFMDE+DAIGGRRFSEGTSADREIQRTLMELLNQ
Sbjct: 243 VDKYIGESARLIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLNQ 302
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
MDGFD+LGQ K+IMATNRPDTLDPALLR GRLDRKIEI LPNE RLEI KIH +AK
Sbjct: 303 MDGFDTLGQTKIIMATNRPDTLDPALLRAGRLDRKIEIGLPNEAGRLEIFKIHTSKVAKQ 362
Query: 681 GEIG-DAATK 689
GE +AA K
Sbjct: 363 GEFDFEAAVK 372
Score = 723 (259.6 bits), Expect = 1.7e-84, Sum P(2) = 1.7e-84
Identities = 142/185 (76%), Positives = 157/185 (84%)
Query: 273 SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLME 332
+SAIVDKYIGESARLIREMF YA+ H+PCIIFMDE+DAIGGRRFSEGTSADREIQRTLME
Sbjct: 239 ASAIVDKYIGESARLIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLME 298
Query: 333 LLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIH 392
LLNQMDGFD+LGQ K+IMATNRPDTLDPALLR GRLDRKIEI LPNE RL IH
Sbjct: 299 LLNQMDGFDTLGQTKIIMATNRPDTLDPALLRAGRLDRKIEIGLPNEAGRLEI---FKIH 355
Query: 393 AGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSD 452
+AK GE D+EA VK+SD FNGAD+RNV TEAG FAIR +R+Y+ Q D MKAVRKV+D
Sbjct: 356 TSKVAKQGEFDFEAAVKMSDGFNGADIRNVVTEAGFFAIRDDRDYILQNDLMKAVRKVAD 415
Query: 453 NKKLD 457
KKL+
Sbjct: 416 VKKLE 420
Score = 564 (203.6 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 127/272 (46%), Positives = 169/272 (62%)
Query: 62 DLLLHCVREQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKC--WTVIVKATNGPRYVV 119
D L +R +++L K Y+K+END+KALQSVGQ+ + + + IVK ++GPRY+V
Sbjct: 62 DARLKDLRLSIRDLDKDYEKTENDIKALQSVGQI-IGEVLKQLDDERYIVKTSSGPRYIV 120
Query: 120 GCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQ 179
GCR + K LK+G RV+LDMTTLTIMR LPREVDPLVYNM+ +PG+I+++ IGGL+EQ
Sbjct: 121 GCRNTIKKENLKNGVRVSLDMTTLTIMRILPREVDPLVYNMTTFEPGEISFNGIGGLTEQ 180
Query: 180 IRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 239
IRELREVIELPL NPELF RVGI PPKG LLYGPPGTGKTLLA+AVA+ + ANF+ +S
Sbjct: 181 IRELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPAS 240
Query: 240 LFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQ 299
V + + ++ + H F AI + E RE+ R
Sbjct: 241 AIVDKYIGESARLIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREI---QRTLM 297
Query: 300 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLM 331
+ MD D +G + T+ + L+
Sbjct: 298 ELLNQMDGFDTLGQTKIIMATNRPDTLDPALL 329
Score = 159 (61.0 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 41/83 (49%), Positives = 51/83 (61%)
Query: 425 EAG---LFAIRSEREYVTQE-DFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQ 480
EAG +F I + + E DF AV K+SD + TEAG FAIR +R+Y+ Q
Sbjct: 345 EAGRLEIFKIHTSKVAKQGEFDFEAAV-KMSDGFNGADIRNVVTEAGFFAIRDDRDYILQ 403
Query: 481 EDFMKAVRKVSDNKKLESKLDYK 503
D MKAVRKV+D KKLE KLDY+
Sbjct: 404 NDLMKAVRKVADVKKLEGKLDYE 426
Score = 142 (55.0 bits), Expect = 1.2e-87, Sum P(2) = 1.2e-87
Identities = 25/55 (45%), Positives = 40/55 (72%)
Query: 6 VDEVRHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQ 60
+D R + L ++ KL EH + + RL+++R +++L K Y+K+END+KALQSVGQ
Sbjct: 40 IDPERERALSKFKDKLLEHRKWDARLKDLRLSIRDLDKDYEKTENDIKALQSVGQ 94
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 655 (235.6 bits), Expect = 1.5e-87, Sum P(2) = 1.5e-87
Identities = 164/411 (39%), Positives = 232/411 (56%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
I+ K+ GE+ +R++F A P IIF+DE+DA+ +R EG + E +R + LL
Sbjct: 423 IISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQNEVE-KRVVASLLT 479
Query: 336 QMDGFDSLG---QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIH 392
MDG S G QV ++ ATNRP LD AL RPGR D++IEI +PN RL +
Sbjct: 480 LMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAADRLDILQKLLQR 539
Query: 393 AGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRS--EREYVTQEDFMKAVRKV 450
+ E++ + + + GADL+ +C EAGL+A+R ++ + M + K+
Sbjct: 540 VPHLLT--EVELLQLANSAHGYVGADLKALCNEAGLYALRRVLNKQPNLSDSKMAGLVKI 597
Query: 451 SDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLES-KLDYKPVIELP 509
+ N L N R A RE D SD LE+ KL K +E P
Sbjct: 598 TLNDFLQGMNDIRPSA-------MREVAI--DVPNV--SWSDIGGLENIKLKLKQAVEWP 646
Query: 510 LLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESA 569
L +PE F R+GI PPKG LLYGPPG KT++A+A+A++ NFL + +++KY+GES
Sbjct: 647 LKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESE 706
Query: 570 RLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQ 629
R +RE+F AR P IIF DE+DA+ R S + A R L +LL +MDG + L
Sbjct: 707 RAVREIFRKARAVSPSIIFFDELDALAIERGSS-SGAGNVADRVLAQLLTEMDGIEQLKD 765
Query: 630 VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKI--HAGPIA 678
V ++ ATNRPD +D AL+RPGR+DR I +PLP+ R EIL + H+ PI+
Sbjct: 766 VTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPIS 816
Score = 384 (140.2 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 87/181 (48%), Positives = 121/181 (66%)
Query: 496 LESKLD-YKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 554
L S+L + +IELPL PELF+ GI PP+G LLYGPPGTGKT++ARAVA+++ A ++
Sbjct: 358 LSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANEVGA-YVS 416
Query: 555 VVSSA-IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRT 613
V++ I+ K+ GE+ +R++F A P IIF+DE+DA+ +R EG + E +R
Sbjct: 417 VINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQNEVE-KRV 473
Query: 614 LMELLNQMDGFDSLG---QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEIL 670
+ LL MDG S G QV ++ ATNRP LD AL RPGR D++IEI +PN RL+IL
Sbjct: 474 VASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAADRLDIL 533
Query: 671 K 671
+
Sbjct: 534 Q 534
Score = 320 (117.7 bits), Expect = 4.6e-45, Sum P(2) = 4.6e-45
Identities = 72/201 (35%), Positives = 119/201 (59%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
+++KY+GES R +RE+F AR P IIF DE+DA+ R S + A R L +LL
Sbjct: 697 LMNKYVGESERAVREIFRKARAVSPSIIFFDELDALAIERGSS-SGAGNVADRVLAQLLT 755
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
+MDG + L V ++ ATNRPD +D AL+RPGR+DR I +PLP+ R + H+ P
Sbjct: 756 EMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATR-REILNLQFHSMP 814
Query: 396 IAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY--VTQEDFMKAVRKVSD- 452
I+ +++ + ++ +D+++GA++ VC EA L A+ + + +T+ F +A+ V+
Sbjct: 815 ISN--DVNLDELIFQTDTYSGAEIIAVCREAALLALEEDIQANSITRRHFTRALSTVTPR 872
Query: 453 -NKKLDHC-NSYRTEAGLFAI 471
+K L Y+ ++GL +
Sbjct: 873 ISKSLRRFYEEYQEKSGLHTL 893
Score = 239 (89.2 bits), Expect = 1.5e-87, Sum P(2) = 1.5e-87
Identities = 47/91 (51%), Positives = 66/91 (72%)
Query: 157 VYNMSHEDPGD--ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPP 214
V+ S E+ +TY IGGLS Q++ +RE+IELPL PELF+ GI PP+G LLYGPP
Sbjct: 337 VHTNSEEEDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPP 396
Query: 215 GTGKTLLARAVASQLDANFLKVVSSLFVTSK 245
GTGKT++ARAVA+++ A ++ V++ + SK
Sbjct: 397 GTGKTMIARAVANEVGA-YVSVINGPEIISK 426
Score = 198 (74.8 bits), Expect = 9.3e-41, Sum P(2) = 9.3e-41
Identities = 46/118 (38%), Positives = 74/118 (62%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTIMRYLP--REVDPLVYNMSHEDPGDITYSAIGGLSEQ 179
RR L+K S +++A + +T+ +L ++ P D ++++S IGGL E
Sbjct: 577 RRVLNKQPNLSDSKMA-GLVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGL-EN 634
Query: 180 IR-ELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
I+ +L++ +E PL +PE F R+GI PPKG LLYGPPG KT++A+A+A++ NFL +
Sbjct: 635 IKLKLKQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAI 692
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 671 (241.3 bits), Expect = 1.9e-87, Sum P(2) = 1.9e-87
Identities = 159/408 (38%), Positives = 238/408 (58%)
Query: 269 FPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQR 328
F ++V KY+GE+ +R++F AR HQP IIF+DEIDA+ +R + + A+
Sbjct: 342 FTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAESRAVA 401
Query: 329 TLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWP 388
TL+ LL DG + G+V +I ATNRP+++D AL RPGRL+++IEI +P++ ARL
Sbjct: 402 TLLTLL---DGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARL-DIIK 457
Query: 389 ISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVR 448
+ + P + + E + + ++ GADL V EA L AI+ + +
Sbjct: 458 LLLSGVP-NEINDAQLEDLASRTHAYVGADLAAVVREAALRAIK------------RTIS 504
Query: 449 KVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVR-KVSD-NKKLESKLDYKPVI 506
D LD + + + FA+ S R+ +E M++ SD + E K K +
Sbjct: 505 LQKDTSGLDIFGAVQMDDLEFALSSVRQSAMREFMMESPNVHWSDIGGQEEVKQKLKESV 564
Query: 507 ELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIG 566
E PL + E F R+G+ PPKG LLYGPPG KT+ A+A+A++ NF+ V + DK++G
Sbjct: 565 EWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVG 624
Query: 567 ESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDS 626
ES R +R++F AR P +IF DEIDA+ R E S+DR + LLN++DG ++
Sbjct: 625 ESERAVRQVFQKARQASPSVIFFDEIDALTANR-GEDNSSDRVVAA----LLNELDGIEA 679
Query: 627 LGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
L V ++ ATNRPD +DPAL+RPGRLDR + + PN +AR +I+KI A
Sbjct: 680 LRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQA 727
Score = 424 (154.3 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 85/184 (46%), Positives = 126/184 (68%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ ++ELP NPELF+ I PP+G LLYGPPGTGKT++ RAVA++ +A + ++V
Sbjct: 292 RDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVG 351
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE+ +R++F AR HQP IIF+DEIDA+ +R + + A+ TL+ LL D
Sbjct: 352 KYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAESRAVATLLTLL---D 408
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
G + G+V +I ATNRP+++D AL RPGRL+++IEI +P++ ARL+I+K+ + E
Sbjct: 409 GMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVPN--E 466
Query: 683 IGDA 686
I DA
Sbjct: 467 INDA 470
Score = 302 (111.4 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 70/192 (36%), Positives = 112/192 (58%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
+ DK++GES R +R++F AR P +IF DEIDA+ R E S+DR + LLN
Sbjct: 618 LFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTANR-GEDNSSDRVVAA----LLN 672
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
++DG ++L V ++ ATNRPD +DPAL+RPGRLDR + + PN +AR + I A
Sbjct: 673 ELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQI---VKIQAEK 729
Query: 396 IAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY--VTQEDF---MKAVRKV 450
+ ++D + + + ++ +GA++ +C EAGL A+ + E + Q F + A+RK
Sbjct: 730 MKFAEDVDLDLIAEKTEGCSGAEVVALCQEAGLIAMHEDLEAKEICQAHFKTALLALRKA 789
Query: 451 SDNKKLDHCNSY 462
L++ S+
Sbjct: 790 ITRDMLEYYASF 801
Score = 222 (83.2 bits), Expect = 1.9e-87, Sum P(2) = 1.9e-87
Identities = 48/121 (39%), Positives = 75/121 (61%)
Query: 125 LDKAKLKSGTRVA-LDMTTLTIMRYLPREV-DPLVYNMSHED-------PGDITYSAIGG 175
LD+ ++ T + +++ T +++ LP E YN E+ P +T+S+IGG
Sbjct: 225 LDEPRIYKFTAASSMEIETPDLLK-LPHEDRTQSAYNQGSEETQNFDGPPSAVTFSSIGG 283
Query: 176 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 235
L QI ++R+++ELP NPELF+ I PP+G LLYGPPGTGKT++ RAVA++ +A
Sbjct: 284 LQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANAQVFT 343
Query: 236 V 236
+
Sbjct: 344 I 344
Score = 182 (69.1 bits), Expect = 3.0e-37, Sum P(2) = 3.0e-37
Identities = 35/74 (47%), Positives = 51/74 (68%)
Query: 163 EDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLA 222
E P ++ +S IGG E ++L+E +E PL + E F R+G+ PPKG LLYGPPG KT+ A
Sbjct: 541 ESP-NVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITA 599
Query: 223 RAVASQLDANFLKV 236
+A+A++ NF+ V
Sbjct: 600 KAIATETGLNFIAV 613
Score = 45 (20.9 bits), Expect = 6.7e-23, Sum P(2) = 6.7e-23
Identities = 23/105 (21%), Positives = 48/105 (45%)
Query: 80 DKSENDLKALQSVGQVSLSTSVSKCWTVIV-KATNGPRYVVGCRRQLDKAKLKSGTRVAL 138
D SE + +A+ ++ ++L ++ V+V ATN P + R+ + + + +
Sbjct: 391 DVSEAESRAVATL--LTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPD 448
Query: 139 DMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG-LSEQIRE 182
L I++ L V + + ED T++ +G L+ +RE
Sbjct: 449 KSARLDIIKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVRE 493
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 673 (242.0 bits), Expect = 3.1e-87, Sum P(2) = 3.1e-87
Identities = 167/434 (38%), Positives = 249/434 (57%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F I+ K GES +R+ F A + P IIF+DEID+I +R E T+ + E +
Sbjct: 269 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTNGEVE-R 325
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG S V ++ ATNRP+++DPAL R GR DR+I+I +P+E RL
Sbjct: 326 RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLE--- 382
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ IH + ++D E + K + + GADL +CTEA L IR + + + ED
Sbjct: 383 VLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDD-SID 441
Query: 448 RKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNK--KLES-KLDYKP 504
++ ++ + + + T G + RE V + V VS N LE+ K + +
Sbjct: 442 AEILNSMAVTN-EHFHTALGNSNPSALRETVVE------VPNVSWNDIGGLENVKRELQE 494
Query: 505 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKY 564
++ P+ +PE F++ G++P KG L YGPPG GKTLLA+A+A++ ANF+ V ++ +
Sbjct: 495 TVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMW 554
Query: 565 IGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS-EGTSADREIQRTLMELLNQMDG 623
GES +RE+F+ AR PC++F DE+D+I +R G R L +LL +MDG
Sbjct: 555 FGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDG 614
Query: 624 FDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAKHG 681
++ V +I ATNRPD +D ALLRPGRLD+ I IPLP+E +RL I K + PIAK
Sbjct: 615 MNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDV 674
Query: 682 EIGDAATKWVLPFT 695
+IG A K+ F+
Sbjct: 675 DIG-ALAKYTQGFS 687
Score = 413 (150.4 bits), Expect = 1.7e-35, P = 1.7e-35
Identities = 121/343 (35%), Positives = 188/343 (54%)
Query: 344 GQVKMIMATNRPDTLDPALLRPGRLDRKI---EIPLPNEQARLAHTWPISIHAGPIAKHG 400
G +I R DT+ AL + KI ++ N + RL IS+H P K+G
Sbjct: 58 GDTILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDV--ISVHQCPDVKYG 115
Query: 401 EIDYEAVVKLSDSFNGA--DLRNVCTEAG-LFAIRSER--EYVTQEDFMKAVR-KVSDNK 454
+ + ++ + D+ G +L + + L A R R + M++V KV +
Sbjct: 116 KRVH--ILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETD 173
Query: 455 KLDHCNSYRTEAGLFAIRSEREYVTQEDFMK----AVRKVSDNKKLESKLDYKPVIELPL 510
++C + +F E E V +ED + V +K +++ + ++ELPL
Sbjct: 174 PAEYC-VVAPDTEIFC---EGEPVKREDEERLDDVGYDDVGGVRKQMAQI--RELVELPL 227
Query: 511 LNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESAR 570
+P+LF+ +G+ PPKG LLYGPPG+GKTL+ARAVA++ A F + I+ K GES
Sbjct: 228 RHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESES 287
Query: 571 LIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQV 630
+R+ F A + P IIF+DEID+I +R E T+ + E +R + +LL MDG S V
Sbjct: 288 NLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTNGEVE-RRIVSQLLTLMDGLKSRAHV 344
Query: 631 KMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
++ ATNRP+++DPAL R GR DR+I+I +P+E RLE+L+IH
Sbjct: 345 IVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIH 387
Score = 317 (116.6 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 84/219 (38%), Positives = 124/219 (56%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS-EGTSADREIQRTLMELL 334
++ + GES +RE+F+ AR PC++F DE+D+I +R G R L +LL
Sbjct: 550 LLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLL 609
Query: 335 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAG 394
+MDG ++ V +I ATNRPD +D ALLRPGRLD+ I IPLP+E +RL + + ++
Sbjct: 610 TEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRL-NIFKAALRKS 668
Query: 395 PIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNK 454
PIAK ++D A+ K + F+GAD+ +C A +AIR E +D K R+ S+N
Sbjct: 669 PIAK--DVDIGALAKYTQGFSGADITEICQRACKYAIRENIE----KDIEKEKRR-SENP 721
Query: 455 KLDHCNSYRTEAGLFAIRSEREYVTQEDFMK-AVRKVSD 492
+ E G+ + SE + E+ MK A R VSD
Sbjct: 722 EA------MEEDGVDEV-SEIKAAHFEESMKYARRSVSD 753
Score = 218 (81.8 bits), Expect = 3.1e-87, Sum P(2) = 3.1e-87
Identities = 41/82 (50%), Positives = 60/82 (73%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P V E D+ Y +GG+ +Q+ ++RE++ELPL +P+LF+ +G+ PPKG LLY
Sbjct: 189 EGEP-VKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLY 247
Query: 212 GPPGTGKTLLARAVASQLDANF 233
GPPG+GKTL+ARAVA++ A F
Sbjct: 248 GPPGSGKTLIARAVANETGAFF 269
Score = 195 (73.7 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 34/70 (48%), Positives = 53/70 (75%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
+++++ IGGL REL+E ++ P+ +PE F++ G++P KG L YGPPG GKTLLA+A+A
Sbjct: 476 NVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 535
Query: 227 SQLDANFLKV 236
++ ANF+ V
Sbjct: 536 NECQANFISV 545
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 674 (242.3 bits), Expect = 8.1e-87, Sum P(2) = 8.1e-87
Identities = 163/433 (37%), Positives = 253/433 (58%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F I+ K GES +R+ F A + P IIF+DEID+I +R E T + E +
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHGEVE-R 326
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG S V ++ ATNRP+++DPAL R GR DR+I+I +P+E RL
Sbjct: 327 RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLE--- 383
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ IH + ++D E V K + + GADL +CTEA L IR + + + +D +
Sbjct: 384 VLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDD-EEID 442
Query: 448 RKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVS--DNKKLES-KLDYKP 504
++ ++ + + + ++T G + RE V + V VS D LE+ K + +
Sbjct: 443 AEILNSMAVSN-DHFQTALGNSNPSALRETVVE------VPNVSWEDIGGLENVKRELQE 495
Query: 505 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKY 564
++ P+ +PE F++ G++P KG L YGPPG GKTLLA+A+A++ ANF+ + ++ +
Sbjct: 496 TVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMW 555
Query: 565 IGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 624
GES +RE+F+ AR PC++F DE+D+I +R + A R L +LL +MDG
Sbjct: 556 FGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGM 615
Query: 625 DSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAKHGE 682
++ V +I ATNRPD +DPALLRPGRLD+ I IPLP+E++R +I K + P+AK +
Sbjct: 616 NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVD 675
Query: 683 IGDAATKWVLPFT 695
+ A K+ F+
Sbjct: 676 LR-ALAKYTQGFS 687
Score = 411 (149.7 bits), Expect = 2.9e-35, P = 2.9e-35
Identities = 120/344 (34%), Positives = 189/344 (54%)
Query: 344 GQVKMIMATNRPDTLDPALLRPGRLDRKI---EIPLPNEQARLAHTWPISIHAGPIAKHG 400
G +I R DT+ AL + KI ++ N + RL IS+H P K+G
Sbjct: 59 GDTILIKGKKRKDTVCIALADETCDEPKIRMNKVVRSNLRVRLGDV--ISVHQCPDVKYG 116
Query: 401 EIDYEAVVKLSDSFNGADLRNVCTEAGL--FAIRSEREYVTQEDF-----MKAVR-KVSD 452
+ ++ L D+ G N+ +A L + + + R + F M+++ KV +
Sbjct: 117 NRVH--ILPLDDTIEGVS-GNIF-DAYLKPYFLEAYRPVRKGDLFLVRGGMRSIEFKVIE 172
Query: 453 NKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVS--DNKKLESKL-DYKPVIELP 509
++C + +F E E + +ED + + +V D + ++ + ++ELP
Sbjct: 173 TDPAEYC-VVAPDTEIFC---EGEPIKRED-EERLDEVGYDDVGGVRKQMAQIRELVELP 227
Query: 510 LLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESA 569
L +P+LF+ +G+ PPKG LLYGPPG+GKTL+ARAVA++ A F + I+ K GES
Sbjct: 228 LRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESE 287
Query: 570 RLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQ 629
+R+ F A + P IIF+DEID+I +R E T + E +R + +LL MDG S
Sbjct: 288 SNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKSRAH 344
Query: 630 VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
V ++ ATNRP+++DPAL R GR DR+I+I +P+E RLE+L+IH
Sbjct: 345 VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIH 388
Score = 319 (117.4 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 75/232 (32%), Positives = 125/232 (53%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + + + ++ + GES +RE+F+ AR PC++F DE+D+I +R
Sbjct: 531 LAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQR 590
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
+ A R L +LL +MDG ++ V +I ATNRPD +DPALLRPGRLD+ I IP
Sbjct: 591 GNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIP 650
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LP+E++R + + P+AK ++D A+ K + F+GAD+ +C + +AIR
Sbjct: 651 LPDEESRY-QIFKSCLRKSPVAK--DVDLRALAKYTQGFSGADITEICQRSCKYAIRENI 707
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLF--AIRSEREYVTQEDFMK 485
E +++ +A + + + D +AG F +++ R V+ D K
Sbjct: 708 EKDIEKERKRA--ESPEAMEEDEEEIAEIKAGHFEESMKYARRSVSDADIRK 757
Score = 213 (80.0 bits), Expect = 8.1e-87, Sum P(2) = 8.1e-87
Identities = 36/67 (53%), Positives = 55/67 (82%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++ Y +GG+ +Q+ ++RE++ELPL +P+LF+ +G+ PPKG LLYGPPG+GKTL+ARAVA
Sbjct: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
Query: 227 SQLDANF 233
++ A F
Sbjct: 264 NETGAFF 270
Score = 193 (73.0 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 33/70 (47%), Positives = 52/70 (74%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++++ IGGL REL+E ++ P+ +PE F++ G++P KG L YGPPG GKTLLA+A+A
Sbjct: 477 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
Query: 227 SQLDANFLKV 236
++ ANF+ +
Sbjct: 537 NECQANFISI 546
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 673 (242.0 bits), Expect = 8.1e-87, Sum P(2) = 8.1e-87
Identities = 164/433 (37%), Positives = 249/433 (57%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F I+ K GES +R+ F A + P IIF+DEID+I +R E T+ + E +
Sbjct: 269 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTNGEVE-R 325
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG S V ++ ATNRP+++DPAL R GR DR+I+I +P+E RL
Sbjct: 326 RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLE--- 382
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ IH + ++D E + K + + GADL +CTEA L IR + + + ED
Sbjct: 383 VLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDD-SID 441
Query: 448 RKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVS--DNKKLES-KLDYKP 504
++ ++ + + + T G + RE V + V VS D LE+ K + +
Sbjct: 442 AEILNSMAVSN-EHFHTALGNSNPSALRETVVE------VPNVSWEDIGGLENVKRELQE 494
Query: 505 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKY 564
++ P+ +PE F++ G++P KG L YGPPG GKTLLA+A+A++ ANF+ V ++ +
Sbjct: 495 TVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMW 554
Query: 565 IGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 624
GES +RE+F+ AR PC++F DE+D+I +R + A R L +LL +MDG
Sbjct: 555 FGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGM 614
Query: 625 DSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAKHGE 682
++ V +I ATNRPD +D ALLRPGRLD+ I IPLP+E +RL I K + P+AK +
Sbjct: 615 NAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVD 674
Query: 683 IGDAATKWVLPFT 695
+ A K+ F+
Sbjct: 675 V-TALAKYTQGFS 686
Score = 414 (150.8 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 121/342 (35%), Positives = 189/342 (55%)
Query: 344 GQVKMIMATNRPDTLDPALLRPGRLDRKI---EIPLPNEQARLAHTWPISIHAGPIAKHG 400
G +I R DT+ AL + KI ++ N + RL IS+H P K+G
Sbjct: 58 GDTILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDV--ISVHQCPDVKYG 115
Query: 401 EIDYEAVVKLSDSFNGA--DLRNVCTEAG-LFAIRSER--EYVTQEDFMKAVR-KVSDNK 454
+ + ++ + D+ G +L + + L A R R + M++V KV +
Sbjct: 116 KRVH--ILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETD 173
Query: 455 KLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVS--DNKKLESKL-DYKPVIELPLL 511
++C + +F E E V +ED + + +V D + ++ + ++ELPL
Sbjct: 174 PAEYC-VVAPDTEIFC---EGEPVKRED-EERLDEVGYDDVGGVRKQMAQIRELVELPLR 228
Query: 512 NPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARL 571
+P+LF+ +G+ PPKG LLYGPPG+GKTL+ARAVA++ A F + I+ K GES
Sbjct: 229 HPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESN 288
Query: 572 IREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVK 631
+R+ F A + P IIF+DEID+I +R E T+ + E +R + +LL MDG S V
Sbjct: 289 LRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTNGEVE-RRIVSQLLTLMDGLKSRAHVI 345
Query: 632 MIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
++ ATNRP+++DPAL R GR DR+I+I +P+E RLE+L+IH
Sbjct: 346 VMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIH 387
Score = 317 (116.6 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
Identities = 66/161 (40%), Positives = 99/161 (61%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
++ + GES +RE+F+ AR PC++F DE+D+I +R + A R L +LL
Sbjct: 550 LLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLT 609
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
+MDG ++ V +I ATNRPD +D ALLRPGRLD+ I IPLP+E +RL + + + P
Sbjct: 610 EMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRL-NIFKACLRKSP 668
Query: 396 IAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSERE 436
+AK ++D A+ K + F+GAD+ +C A +AIR E
Sbjct: 669 VAK--DVDVTALAKYTQGFSGADITEICQRACKYAIRENIE 707
Score = 214 (80.4 bits), Expect = 8.1e-87, Sum P(2) = 8.1e-87
Identities = 40/82 (48%), Positives = 60/82 (73%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P V E ++ Y +GG+ +Q+ ++RE++ELPL +P+LF+ +G+ PPKG LLY
Sbjct: 189 EGEP-VKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLY 247
Query: 212 GPPGTGKTLLARAVASQLDANF 233
GPPG+GKTL+ARAVA++ A F
Sbjct: 248 GPPGSGKTLIARAVANETGAFF 269
Score = 194 (73.4 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 34/70 (48%), Positives = 52/70 (74%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++++ IGGL REL+E ++ P+ +PE F++ G++P KG L YGPPG GKTLLA+A+A
Sbjct: 476 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 535
Query: 227 SQLDANFLKV 236
++ ANF+ V
Sbjct: 536 NECQANFISV 545
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 668 (240.2 bits), Expect = 1.0e-86, Sum P(2) = 1.0e-86
Identities = 165/465 (35%), Positives = 263/465 (56%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F ++ K GES +R+ F A + P IIF+DEID+I +R + T+ + E +
Sbjct: 276 FFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKR--DKTNGEVE-R 332
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG + V +I ATNRP+++DPAL R GR DR+++I +P+ RL
Sbjct: 333 RVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE--- 389
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVT-QEDFMKA 446
+ IH + ++D EA+ + + GAD+ ++C+EA + IR + + + ED + A
Sbjct: 390 VLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDEDEIDA 449
Query: 447 VRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK-L-ESKLDYKP 504
+V D+ + N +R FA+ + +E +++V D+ L E K + K
Sbjct: 450 --EVLDSLGVTMDN-FR-----FALGNSNPSALRETVVESVNVTWDDVGGLDEIKEELKE 501
Query: 505 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKY 564
+E P+L+P+ + + G++P KG L YGPPGTGKTLLA+AVA+++ ANF+ V ++ +
Sbjct: 502 TVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMW 561
Query: 565 IGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 624
GES IR++F+ AR P ++F+DE+D+I R A R + +LL +MDG
Sbjct: 562 YGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGM 621
Query: 625 DSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEIL--KIHAGPIAKHGE 682
++ V +I ATNRPD +DPA+LRPGRLD+ I +PLP+E ARL IL ++ P+ E
Sbjct: 622 NAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLE 681
Query: 683 IGDAATKWVLPFTAGGFIYI---ATVSVIPELLEDTSPKQTVKEI 724
+ A K F+ +YI A I + +E + KE+
Sbjct: 682 L-TAIAKATQGFSGADLLYIVQRAAKYAIKDSIEAHRQHEAEKEV 725
Score = 408 (148.7 bits), Expect = 6.8e-35, P = 6.8e-35
Identities = 118/354 (33%), Positives = 191/354 (53%)
Query: 335 NQMDGFDSL-GQVKMIMATNRPDTLDPAL----LRPG--RLDRKIEIPLPNEQARLAHTW 387
N MD + G ++ R DT+ L L G R++R + N + RL
Sbjct: 54 NTMDKLELFRGDTVLVKGKKRKDTVLIVLIDDELEDGACRINRVVR---NNLRIRLGDL- 109
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNG--ADLRNVCTEAGLFAIRSEREYVTQEDFMK 445
++IH P K+ +V+ ++D+ G +L +V + + + + R + F+
Sbjct: 110 -VTIHPCPDIKYAT--RISVLPIADTIEGITGNLFDVFLKP--YFVEAYRPVRKGDHFVV 164
Query: 446 --AVRKVSDNKKLD-HCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVS--DNKKLESKL 500
+R+V + K +D Y A I E E + +ED + +V D ++
Sbjct: 165 RGGMRQV-EFKVVDVEPEEYAVVAQDTIIHWEGEPINREDEENNMNEVGYDDIGGCRKQM 223
Query: 501 -DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSA 559
+ ++ELPL +P+LF+ +GI PP+G L+YGPPGTGKTL+ARAVA++ A F +
Sbjct: 224 AQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPE 283
Query: 560 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 619
++ K GES +R+ F A + P IIF+DEID+I +R + T+ + E +R + +LL
Sbjct: 284 VMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKR--DKTNGEVE-RRVVSQLLT 340
Query: 620 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
MDG + V +I ATNRP+++DPAL R GR DR+++I +P+ RLE+L+IH
Sbjct: 341 LMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLRIH 394
Score = 287 (106.1 bits), Expect = 2.7e-39, Sum P(2) = 2.7e-39
Identities = 75/222 (33%), Positives = 121/222 (54%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
++ + GES IR++F+ AR P ++F+DE+D+I R A R + +LL
Sbjct: 557 LLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLT 616
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
+MDG ++ V +I ATNRPD +DPA+LRPGRLD+ I +PLP+E ARL+ + P
Sbjct: 617 EMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLS-ILNAQLRKTP 675
Query: 396 IAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 455
+ + G ++ A+ K + F+GADL + A +AI+ E Q + K V+ ++ +
Sbjct: 676 L-EPG-LELTAIAKATQGFSGADLLYIVQRAAKYAIKDSIEAHRQHEAEKEVKVEGEDVE 733
Query: 456 L-DHCNSYRTEAGLFAIRSEREYVTQEDFMKAV----RKVSD 492
+ D E + + Y+T+E F +A+ R VSD
Sbjct: 734 MTDEGAKAEQEPEVDPV----PYITKEHFAEAMKTAKRSVSD 771
Score = 218 (81.8 bits), Expect = 1.0e-86, Sum P(2) = 1.0e-86
Identities = 42/94 (44%), Positives = 65/94 (69%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ + ++ Y IGG +Q+ ++RE++ELPL +P+LF+ +GI PP+G L+Y
Sbjct: 195 EGEPINREDEENNMNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMY 254
Query: 212 GPPGTGKTLLARAVASQLDANFLKVVSSLFVTSK 245
GPPGTGKTL+ARAVA++ A F +++ V SK
Sbjct: 255 GPPGTGKTLMARAVANETGAFFF-LINGPEVMSK 287
Score = 209 (78.6 bits), Expect = 2.3e-38, Sum P(2) = 2.3e-38
Identities = 42/112 (37%), Positives = 71/112 (63%)
Query: 125 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 184
LD+ ++ + +L +T + R+ +P + + ++T+ +GGL E EL+
Sbjct: 442 LDEDEIDAEVLDSLGVT-MDNFRFALGNSNPSALRETVVESVNVTWDDVGGLDEIKEELK 500
Query: 185 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
E +E P+L+P+ + + G++P KG L YGPPGTGKTLLA+AVA+++ ANF+ V
Sbjct: 501 ETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISV 552
Score = 38 (18.4 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 29 GRLREMREQLKELTKQY 45
G L E++E+LKE T +Y
Sbjct: 490 GGLDEIKEELKE-TVEY 505
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 663 (238.4 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 151/406 (37%), Positives = 239/406 (58%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F I+ K GES +R+ F A + P IIF+DEID+I +R + T+ + E +
Sbjct: 277 FFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKR--DKTNGEVE-R 333
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG + V +I ATNRP+++DPAL R GR DR+++I +P+ + RL
Sbjct: 334 RVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEI-- 391
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ IH + ++D EA+ + F GAD+ ++C+EA + IR + + + E+
Sbjct: 392 -LRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEE----- 445
Query: 448 RKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDN-KKLES-KLDYKPV 505
+ D + L+ + FA+ + +E ++ V D+ L++ K + K
Sbjct: 446 -ETIDTEVLNSLGVTQDNFR-FALGNSNPSALRETVVENVNVTWDDIGGLDNIKNELKET 503
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
+E P+L+P+ +Q+ G+ P KG L +GPPGTGKTLLA+AVA+++ ANF+ V ++ +
Sbjct: 504 VEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWY 563
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 625
GES IR++F+ AR P ++F+DE+D+I R A R + +LL +MDG +
Sbjct: 564 GESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMN 623
Query: 626 SLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
+ V +I ATNRPD +DPALLRPGRLD+ I +PLP+E ARL IL+
Sbjct: 624 AKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQ 669
Score = 414 (150.8 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 96/245 (39%), Positives = 149/245 (60%)
Query: 471 IRSEREYVTQEDFMKAVRKVS-DN----KKLESKLDYKPVIELPLLNPELFQRVGITPPK 525
I E E + +ED ++ +V D+ KK +++ + ++ELPL +P+LF+ +GI PPK
Sbjct: 193 IHCEGEPINREDEENSLNEVGYDDIGGCKKQMAQI--RELVELPLRHPQLFKSIGIKPPK 250
Query: 526 GCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPC 585
G L+YGPPGTGKT++ARAVA++ A F + I+ K GES +R+ F A + P
Sbjct: 251 GILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPS 310
Query: 586 IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPA 645
IIF+DEID+I +R + T+ + E +R + +LL MDG + V +I ATNRP+++DPA
Sbjct: 311 IIFIDEIDSIAPKR--DKTNGEVE-RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPA 367
Query: 646 LLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGEIGDAATKWVLPFTAGGFIYIATV 705
L R GR DR+++I +P+ + RLEIL+IH K+ ++ D + GF+
Sbjct: 368 LRRFGRFDREVDIGVPDAEGRLEILRIHT----KNMKLADDVDLEAIASETHGFVGADIA 423
Query: 706 SVIPE 710
S+ E
Sbjct: 424 SLCSE 428
Score = 279 (103.3 bits), Expect = 2.5e-38, Sum P(2) = 2.5e-38
Identities = 74/221 (33%), Positives = 116/221 (52%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
++ + GES IR++F+ AR P ++F+DE+D+I R A R + +LL
Sbjct: 558 LLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLT 617
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
+MDG ++ V +I ATNRPD +DPALLRPGRLD+ I +PLP+E ARL+ + P
Sbjct: 618 EMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLS-ILQAQLRNTP 676
Query: 396 IAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 455
+ + G +D + K++ F+GADL + + FAI+ E + + K+ + K+
Sbjct: 677 L-EPG-LDLNEIAKITHGFSGADLSYIVQRSAKFAIKDSIEAQVK------INKIKEEKE 728
Query: 456 LDHCNSYRTEAGLFAIRSEREYVTQ---EDFMK-AVRKVSD 492
+ Y+T+ E+ MK A R VSD
Sbjct: 729 KVKTEDVDMKVDEVEEEDPVPYITRAHFEEAMKTAKRSVSD 769
Score = 217 (81.4 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ ++ Y IGG +Q+ ++RE++ELPL +P+LF+ +GI PPKG L+Y
Sbjct: 196 EGEPINREDEENSLNEVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMY 255
Query: 212 GPPGTGKTLLARAVASQLDANFLKV 236
GPPGTGKT++ARAVA++ A F +
Sbjct: 256 GPPGTGKTIMARAVANETGAFFFLI 280
Score = 205 (77.2 bits), Expect = 4.6e-37, Sum P(2) = 4.6e-37
Identities = 36/70 (51%), Positives = 53/70 (75%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++T+ IGGL EL+E +E P+L+P+ +Q+ G+ P KG L +GPPGTGKTLLA+AVA
Sbjct: 484 NVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVA 543
Query: 227 SQLDANFLKV 236
+++ ANF+ V
Sbjct: 544 TEVSANFISV 553
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 663 (238.4 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 151/406 (37%), Positives = 239/406 (58%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F I+ K GES +R+ F A + P IIF+DEID+I +R + T+ + E +
Sbjct: 277 FFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKR--DKTNGEVE-R 333
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG + V +I ATNRP+++DPAL R GR DR+++I +P+ + RL
Sbjct: 334 RVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEI-- 391
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ IH + ++D EA+ + F GAD+ ++C+EA + IR + + + E+
Sbjct: 392 -LRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEE----- 445
Query: 448 RKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDN-KKLES-KLDYKPV 505
+ D + L+ + FA+ + +E ++ V D+ L++ K + K
Sbjct: 446 -ETIDTEVLNSLGVTQDNFR-FALGNSNPSALRETVVENVNVTWDDIGGLDNIKNELKET 503
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
+E P+L+P+ +Q+ G+ P KG L +GPPGTGKTLLA+AVA+++ ANF+ V ++ +
Sbjct: 504 VEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWY 563
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 625
GES IR++F+ AR P ++F+DE+D+I R A R + +LL +MDG +
Sbjct: 564 GESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMN 623
Query: 626 SLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
+ V +I ATNRPD +DPALLRPGRLD+ I +PLP+E ARL IL+
Sbjct: 624 AKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQ 669
Score = 414 (150.8 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 96/245 (39%), Positives = 149/245 (60%)
Query: 471 IRSEREYVTQEDFMKAVRKVS-DN----KKLESKLDYKPVIELPLLNPELFQRVGITPPK 525
I E E + +ED ++ +V D+ KK +++ + ++ELPL +P+LF+ +GI PPK
Sbjct: 193 IHCEGEPINREDEENSLNEVGYDDIGGCKKQMAQI--RELVELPLRHPQLFKSIGIKPPK 250
Query: 526 GCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPC 585
G L+YGPPGTGKT++ARAVA++ A F + I+ K GES +R+ F A + P
Sbjct: 251 GILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPS 310
Query: 586 IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPA 645
IIF+DEID+I +R + T+ + E +R + +LL MDG + V +I ATNRP+++DPA
Sbjct: 311 IIFIDEIDSIAPKR--DKTNGEVE-RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPA 367
Query: 646 LLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGEIGDAATKWVLPFTAGGFIYIATV 705
L R GR DR+++I +P+ + RLEIL+IH K+ ++ D + GF+
Sbjct: 368 LRRFGRFDREVDIGVPDAEGRLEILRIHT----KNMKLADDVDLEAIASETHGFVGADIA 423
Query: 706 SVIPE 710
S+ E
Sbjct: 424 SLCSE 428
Score = 279 (103.3 bits), Expect = 2.5e-38, Sum P(2) = 2.5e-38
Identities = 74/221 (33%), Positives = 116/221 (52%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
++ + GES IR++F+ AR P ++F+DE+D+I R A R + +LL
Sbjct: 558 LLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLT 617
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
+MDG ++ V +I ATNRPD +DPALLRPGRLD+ I +PLP+E ARL+ + P
Sbjct: 618 EMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLS-ILQAQLRNTP 676
Query: 396 IAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 455
+ + G +D + K++ F+GADL + + FAI+ E + + K+ + K+
Sbjct: 677 L-EPG-LDLNEIAKITHGFSGADLSYIVQRSAKFAIKDSIEAQVK------INKIKEEKE 728
Query: 456 LDHCNSYRTEAGLFAIRSEREYVTQ---EDFMK-AVRKVSD 492
+ Y+T+ E+ MK A R VSD
Sbjct: 729 KVKTEDVDMKVDEVEEEDPVPYITRAHFEEAMKTAKRSVSD 769
Score = 217 (81.4 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ ++ Y IGG +Q+ ++RE++ELPL +P+LF+ +GI PPKG L+Y
Sbjct: 196 EGEPINREDEENSLNEVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMY 255
Query: 212 GPPGTGKTLLARAVASQLDANFLKV 236
GPPGTGKT++ARAVA++ A F +
Sbjct: 256 GPPGTGKTIMARAVANETGAFFFLI 280
Score = 205 (77.2 bits), Expect = 4.6e-37, Sum P(2) = 4.6e-37
Identities = 36/70 (51%), Positives = 53/70 (75%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++T+ IGGL EL+E +E P+L+P+ +Q+ G+ P KG L +GPPGTGKTLLA+AVA
Sbjct: 484 NVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVA 543
Query: 227 SQLDANFLKV 236
+++ ANF+ V
Sbjct: 544 TEVSANFISV 553
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 651 (234.2 bits), Expect = 1.2e-85, Sum P(2) = 1.2e-85
Identities = 165/418 (39%), Positives = 235/418 (56%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
I+ K+ GE+ +R++F A P IIF+DE+DA+ +R EG ++ E +R + LL
Sbjct: 423 IISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQSEVE-KRVVASLLT 479
Query: 336 QMDGFDSLG---QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIH 392
MDG S G +V ++ ATNRP LD AL RPGR D++IEI +PN Q RL +
Sbjct: 480 LMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRR 539
Query: 393 AGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE-REYVTQEDFMKA-VRKV 450
+ E+ + + + GADL+ +C EAGL A+R R+ D A + K+
Sbjct: 540 VPHLLTKAEL--LRLANNAHGYVGADLKALCNEAGLHALRRVLRKQPNLPDSKVAGMVKI 597
Query: 451 SDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLES-KLDYKPVIELP 509
+ N L N R A RE D SD LE+ KL K +E P
Sbjct: 598 TLNDFLQGMNDIRPSA-------MREVAI--DVPNV--SWSDIGGLENIKLKLKQAVEWP 646
Query: 510 LLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESA 569
L +P+ F R+GI PPKG LLYGPPG KT++A+A+A++ NFL + +++KY+GES
Sbjct: 647 LKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESE 706
Query: 570 RLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQ 629
R +RE+F AR P IIF DE+DA+ R S + A R L +LL +MDG + L
Sbjct: 707 RAVREIFRKARAVAPSIIFFDELDALAVERGSS-SGAGNVADRVLAQLLTEMDGIEQLKN 765
Query: 630 VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKI--HAGPIAKHGEIGD 685
V ++ ATNRPD +D AL+RPGR+DR I +PLP+ R EIL + H+ PI+ ++ +
Sbjct: 766 VTVLAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNEVDLDE 823
Score = 383 (139.9 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 86/181 (47%), Positives = 122/181 (67%)
Query: 496 LESKLD-YKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 554
L S+L + +IELPL PELF+ GI P+G LLYGPPGTGKT++ARAVA+++ A ++
Sbjct: 358 LNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGA-YVS 416
Query: 555 VVSSA-IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRT 613
V++ I+ K+ GE+ +R++F A P IIF+DE+DA+ +R EG ++ E +R
Sbjct: 417 VINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQSEVE-KRV 473
Query: 614 LMELLNQMDGFDSLG---QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEIL 670
+ LL MDG S G +V ++ ATNRP LD AL RPGR D++IEI +PN Q RL+IL
Sbjct: 474 VASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDIL 533
Query: 671 K 671
+
Sbjct: 534 Q 534
Score = 318 (117.0 bits), Expect = 2.3e-43, Sum P(2) = 2.3e-43
Identities = 73/201 (36%), Positives = 117/201 (58%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
+++KY+GES R +RE+F AR P IIF DE+DA+ R S + A R L +LL
Sbjct: 697 LMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAVERGSS-SGAGNVADRVLAQLLT 755
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
+MDG + L V ++ ATNRPD +D AL+RPGR+DR I +PLP+ R + H+ P
Sbjct: 756 EMDGIEQLKNVTVLAATNRPDRIDKALMRPGRIDRIIYVPLPDAATR-REILNLQFHSMP 814
Query: 396 IAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRS--EREYVTQEDFMKAVRKVSDN 453
I+ E+D + +V +D+++GA++ VC EA L A+ + + + + F +A+ V+
Sbjct: 815 ISN--EVDLDELVLQTDTYSGAEIIAVCKEAALLALEENIKADCIMKRHFTQALSIVTPR 872
Query: 454 --KKLDHC-NSYRTEAGLFAI 471
+ L Y+ ++GL +
Sbjct: 873 IPESLRRFYEDYQEKSGLHTV 893
Score = 225 (84.3 bits), Expect = 1.2e-85, Sum P(2) = 1.2e-85
Identities = 42/78 (53%), Positives = 60/78 (76%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+TY IGGL+ Q++ +RE+IELPL PELF+ GI P+G LLYGPPGTGKT++ARAVA+
Sbjct: 350 VTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409
Query: 228 QLDANFLKVVSSLFVTSK 245
++ A ++ V++ + SK
Sbjct: 410 EVGA-YVSVINGPEIISK 426
Score = 195 (73.7 bits), Expect = 3.2e-40, Sum P(2) = 3.2e-40
Identities = 46/118 (38%), Positives = 72/118 (61%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTIMRYLP--REVDPLVYNMSHEDPGDITYSAIGGLSEQ 179
RR L K ++VA M +T+ +L ++ P D ++++S IGGL E
Sbjct: 577 RRVLRKQPNLPDSKVA-GMVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGL-EN 634
Query: 180 IR-ELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
I+ +L++ +E PL +P+ F R+GI PPKG LLYGPPG KT++A+A+A++ NFL +
Sbjct: 635 IKLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAI 692
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 656 (236.0 bits), Expect = 2.4e-85, Sum P(2) = 2.4e-85
Identities = 156/424 (36%), Positives = 241/424 (56%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F I+ K GES +R+ F A + P IIF+DE+DAI +R E T + E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-R 322
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RL
Sbjct: 323 RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI-- 380
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ IH + ++D E V + GADL +C+EA L AIR + + + ED + +
Sbjct: 381 -LQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED--ETI 437
Query: 448 RKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKV-SDNKKLES-KLDYKPV 505
N + +R +A+ +E ++ + D LE K + + +
Sbjct: 438 DAEVMNSLAVTMDDFR-----WALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQEL 492
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ + ++ +
Sbjct: 493 VQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWF 552
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLMELLNQM 621
GES +RE+F+ AR PC++F DE+D+I GG G +ADR I ++L +M
Sbjct: 553 GESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN----QILTEM 608
Query: 622 DGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAK 679
DG + V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E++R+ ILK + P+AK
Sbjct: 609 DGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAK 668
Query: 680 HGEI 683
G++
Sbjct: 669 AGDV 672
Score = 406 (148.0 bits), Expect = 1.0e-34, P = 1.0e-34
Identities = 90/206 (43%), Positives = 130/206 (63%)
Query: 471 IRSEREYVTQEDFMKAVRKVS--DNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGC 527
I E E + +ED +++ +V D +L K ++ELPL +P LF+ +G+ PP+G
Sbjct: 182 IHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGI 241
Query: 528 LLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCII 587
LLYGPPGTGKTL+ARAVA++ A F + I+ K GES +R+ F A + P II
Sbjct: 242 LLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAII 301
Query: 588 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALL 647
F+DE+DAI +R E T + E +R + +LL MDG V ++ ATNRP+++DPAL
Sbjct: 302 FIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALR 358
Query: 648 RPGRLDRKIEIPLPNEQARLEILKIH 673
R GR DR+++I +P+ RLEIL+IH
Sbjct: 359 RFGRFDREVDIGIPDATGRLEILQIH 384
Score = 332 (121.9 bits), Expect = 2.8e-44, Sum P(2) = 2.8e-44
Identities = 80/235 (34%), Positives = 127/235 (54%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI---- 311
L + + + + ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 527 LAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
Query: 312 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 371
GG G +ADR I ++L +MDG + V +I ATNRPD +DPA+LRPGRLD+
Sbjct: 587 GGNIGDGGGAADRVIN----QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQL 642
Query: 372 IEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI 431
I IPLP+E++R+A ++ P+AK G++D E + K+++ F+GADL +C A AI
Sbjct: 643 IYIPLPDEKSRVA-ILKANLRKSPVAKAGDVDLEFLAKMTNGFSGADLTEICQRACKLAI 701
Query: 432 RSEREY-VTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
R E + +E + + ++ D R + A+R R V+ D K
Sbjct: 702 RESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 756
Score = 217 (81.4 bits), Expect = 2.4e-85, Sum P(2) = 2.4e-85
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 212 GPPGTGKTLLARAVASQLDANFLKV 236
GPPGTGKTL+ARAVA++ A F +
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLI 269
Score = 205 (77.2 bits), Expect = 5.1e-43, Sum P(2) = 5.1e-43
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 177
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 178 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 542
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 657 (236.3 bits), Expect = 4.0e-85, Sum P(2) = 4.0e-85
Identities = 154/416 (37%), Positives = 244/416 (58%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F I+ K GES +R+ F A + P IIF+DEID+I +R E T+ + E +
Sbjct: 286 FFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR--EKTNGEVE-R 342
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG + V ++ ATNRP+++DPAL R GR DR++++ +P+ RL
Sbjct: 343 RVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEI-- 400
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVT-QEDFMKA 446
+ IH + ++D E + + + G+DL ++C+EA + IR + + + ED + A
Sbjct: 401 -LRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEIDA 459
Query: 447 VRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKPVI 506
+V D+ + N +R G + RE V + + VR E K + + +
Sbjct: 460 --EVLDSLGVTMDN-FRFALGSSNPSALRETVVE---VPNVRWEDIGGLEEVKRELRETV 513
Query: 507 ELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIG 566
++P++ E F R G+TP KG L +GPPGTGKTLLA+A+A++ ANF+ V ++ + G
Sbjct: 514 QMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFG 573
Query: 567 ESARLIREMFNYARNHQPCIIFMDEIDAIG-GRRFSEGTSADREIQRTLMELLNQMDGFD 625
ES +R++F+ AR PC++F+DE+D+I R S G S + R + +LL +MDG +
Sbjct: 574 ESESNVRDIFDKARAAAPCVVFLDELDSIAKARGASAGDSGGGD--RVVNQLLTEMDGVN 631
Query: 626 SLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAK 679
S V +I ATNRPD +DPAL+RPGRLD+ I +PLP+E+AR IL+ + P+A+
Sbjct: 632 SKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAE 687
Score = 404 (147.3 bits), Expect = 1.8e-34, P = 1.8e-34
Identities = 87/206 (42%), Positives = 132/206 (64%)
Query: 471 IRSEREYVTQEDFMKAVRKVS--DNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGC 527
I E E + +ED ++ +V D ++ + ++ELPL +P+LF+ +GI PP+G
Sbjct: 202 IHWEGEPINREDEESSLAEVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGI 261
Query: 528 LLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCII 587
L+YGPPGTGKTL+ARAVA++ A F + I+ K GES +R+ F A + P II
Sbjct: 262 LMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAII 321
Query: 588 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALL 647
F+DEID+I +R E T+ + E +R + +LL MDG + V ++ ATNRP+++DPAL
Sbjct: 322 FIDEIDSIAPKR--EKTNGEVE-RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALR 378
Query: 648 RPGRLDRKIEIPLPNEQARLEILKIH 673
R GR DR++++ +P+ RLEIL+IH
Sbjct: 379 RFGRFDREVDVGIPDPTGRLEILRIH 404
Score = 295 (108.9 bits), Expect = 8.3e-40, Sum P(2) = 8.3e-40
Identities = 81/220 (36%), Positives = 127/220 (57%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIG-GRRFSEGTSADREIQRTLMELL 334
++ + GES +R++F+ AR PC++F+DE+D+I R S G S + R + +LL
Sbjct: 567 LLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKARGASAGDSGGGD--RVVNQLL 624
Query: 335 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAG 394
+MDG +S V +I ATNRPD +DPAL+RPGRLD+ I +PLP+E+AR + H
Sbjct: 625 TEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHT- 683
Query: 395 PIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIR-SEREYVTQEDFMKAVRKVSDN 453
P+A+ ++D AV K + F+GADL V A AI+ S E + +E+ + +D+
Sbjct: 684 PVAE--DVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIEEDIKREN--ETGEAPADD 739
Query: 454 KKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRK-VSD 492
+D +A + + +R +V E+ MK R+ VSD
Sbjct: 740 VVMDE------DASVSQV--QRHHV--EEAMKMARRSVSD 769
Score = 214 (80.4 bits), Expect = 4.0e-85, Sum P(2) = 4.0e-85
Identities = 39/85 (45%), Positives = 58/85 (68%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ ++ Y IGG Q+ ++RE++ELPL +P+LF+ +GI PP+G L+Y
Sbjct: 205 EGEPINREDEESSLAEVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMY 264
Query: 212 GPPGTGKTLLARAVASQLDANFLKV 236
GPPGTGKTL+ARAVA++ A F +
Sbjct: 265 GPPGTGKTLMARAVANETGAFFFLI 289
Score = 206 (77.6 bits), Expect = 5.7e-39, Sum P(2) = 5.7e-39
Identities = 43/112 (38%), Positives = 69/112 (61%)
Query: 125 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 184
LD+ ++ + +L +T + R+ +P + + ++ + IGGL E RELR
Sbjct: 452 LDEDEIDAEVLDSLGVT-MDNFRFALGSSNPSALRETVVEVPNVRWEDIGGLEEVKRELR 510
Query: 185 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
E +++P++ E F R G+TP KG L +GPPGTGKTLLA+A+A++ ANF+ V
Sbjct: 511 ETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISV 562
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 657 (236.3 bits), Expect = 6.4e-85, Sum P(2) = 6.4e-85
Identities = 159/416 (38%), Positives = 236/416 (56%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F I+ K GES +R+ F A + P IIF+DEID+I +R E T + E +
Sbjct: 264 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTQGEVE-R 320
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG S V ++ ATNRP+++DPAL R GR DR+I+I +P+ RL
Sbjct: 321 RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDATGRLEI-- 378
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQED-FMKA 446
+ IH + +D EAV + + GADL +CTE+ L IR + + + ED + A
Sbjct: 379 -MRIHTKNMKLDETVDLEAVANETHGYVGADLAALCTESALQCIREKMDVIDLEDETISA 437
Query: 447 VRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLES-KLDYKPV 505
S + DH +RT L + RE V + D LE K + +
Sbjct: 438 EILESMSVTQDH---FRTALTLSNPSALRETVVEVP----TTTWEDIGGLEGVKRELRET 490
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A++ ANF+ + ++ +
Sbjct: 491 VQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWF 550
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 625
GES +RE+F+ AR PC++F DE+D+I R S A R + ++L +MDG +
Sbjct: 551 GESEANVRELFDKARQAAPCVLFFDELDSIARSRGSSQGDAGGAGDRVINQILTEMDGMN 610
Query: 626 SLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAK 679
+ V +I ATNRPD +DPA+LRPGRLD+ I IPLP+ +R+ ILK ++ P+AK
Sbjct: 611 AKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDLPSRVAILKACLNKSPVAK 666
Score = 413 (150.4 bits), Expect = 1.6e-35, P = 1.6e-35
Identities = 126/369 (34%), Positives = 195/369 (52%)
Query: 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTL-----DPALLRPGRLDRKI 372
E + D + E ++Q+ F G +I R DT+ DP + P ++ R
Sbjct: 29 EAINDDNSVVTLNPETMDQLQFFR--GDTLLIKGKKRRDTVCIVLSDPTI-DPSKI-RMN 84
Query: 373 EIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNG--ADLRNVCTEAG-LF 429
++ N + RL IS+H K+G+ + V+ + D+ G +L ++ + L
Sbjct: 85 KVVRNNLRVRLGDM--ISVHQCSDVKYGKRIH--VLPIDDTIEGLSGNLFDLYLKPYFLE 140
Query: 430 AIRSER--EYVTQEDFMKAVR-KVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKA 486
A R R + M+AV KV + ++C A I E E V +ED +
Sbjct: 141 AYRPVRKGDLFLVRGGMRAVEFKVVETDPGEYC----IVAPETFIHCEGEAVKREDEDRL 196
Query: 487 VRKVSDN-KKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAV 544
D+ + +L + ++ELPL +P+LF+ +G+ PPKG LLYGPPG GKT++ARAV
Sbjct: 197 DEVGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAV 256
Query: 545 ASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGT 604
A++ A F + I+ K GES +R+ F A + P IIF+DEID+I +R E T
Sbjct: 257 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKT 314
Query: 605 SADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQ 664
+ E +R + +LL MDG S V ++ ATNRP+++DPAL R GR DR+I+I +P+
Sbjct: 315 QGEVE-RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDAT 373
Query: 665 ARLEILKIH 673
RLEI++IH
Sbjct: 374 GRLEIMRIH 382
Score = 306 (112.8 bits), Expect = 7.2e-41, Sum P(2) = 7.2e-41
Identities = 83/245 (33%), Positives = 126/245 (51%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + + + ++ + GES +RE+F+ AR PC++F DE+D+I R
Sbjct: 525 LAKAIANECQANFISIKGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARSR 584
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
S A R + ++L +MDG ++ V +I ATNRPD +DPA+LRPGRLD+ I IP
Sbjct: 585 GSSQGDAGGAGDRVINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIP 644
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LP+ +R+A ++ P+AK ++D E + + + F+GADL +C A AIR
Sbjct: 645 LPDLPSRVA-ILKACLNKSPVAK--DVDLEFLGQKTQGFSGADLTEICQRACKLAIRESI 701
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDN-- 493
E + KA ++ D K D E R++ QE A R VSDN
Sbjct: 702 EKDIEST--KARQESGDTKMEDDSVDPVPEI-------TRDHF-QEAMRSARRSVSDNDI 751
Query: 494 KKLES 498
+K ES
Sbjct: 752 RKYES 756
Score = 212 (79.7 bits), Expect = 6.4e-85, Sum P(2) = 6.4e-85
Identities = 36/70 (51%), Positives = 55/70 (78%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++ Y IGG+ +Q+ ++RE++ELPL +P+LF+ +G+ PPKG LLYGPPG GKT++ARAVA
Sbjct: 198 EVGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVA 257
Query: 227 SQLDANFLKV 236
++ A F +
Sbjct: 258 NETGAFFFLI 267
Score = 192 (72.6 bits), Expect = 9.0e-39, Sum P(2) = 9.0e-39
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 169 TYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQ 228
T+ IGGL RELRE ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A++
Sbjct: 473 TWEDIGGLEGVKRELRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANE 532
Query: 229 LDANFLKV 236
ANF+ +
Sbjct: 533 CQANFISI 540
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 650 (233.9 bits), Expect = 1.0e-84, Sum P(2) = 1.0e-84
Identities = 155/420 (36%), Positives = 238/420 (56%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F I+ K GES +R+ F A + P IIF+DE+DAI +R E T + E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-R 322
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RL
Sbjct: 323 RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEI-- 380
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ IH + ++D E V + GADL +C+EA L AIR + + + ED + +
Sbjct: 381 -LQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED--ETI 437
Query: 448 RKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKV-SDNKKLES-KLDYKPV 505
N + +R +A+ +E ++ + D LE K + + +
Sbjct: 438 DAEVMNSLAVTMDDFR-----WALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQEL 492
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ + ++ +
Sbjct: 493 VQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWF 552
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLMELLNQM 621
GES +RE+F+ AR PC++F DE+D+I GG G +ADR I ++L +M
Sbjct: 553 GESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN----QILTEM 608
Query: 622 DGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAK 679
DG + V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E++R+ ILK + P+AK
Sbjct: 609 DGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPVAK 668
Score = 408 (148.7 bits), Expect = 6.0e-35, P = 6.0e-35
Identities = 115/305 (37%), Positives = 168/305 (55%)
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNG--ADLRNVCTEAG-LFAIRSE 434
N + RL ISI P K+G+ + V+ + D+ G +L V + L A R
Sbjct: 91 NLRVRLGDV--ISIQPCPDVKYGKRIH--VLPIDDTVEGITGNLFEVYLKPYFLEAYRPI 146
Query: 435 R--EYVTQEDFMKAVR-KVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVS 491
R + M+AV KV + +C A I E E + +ED +++ +V
Sbjct: 147 RKGDIFLVRGGMRAVEFKVVETDPSPYC----IVAPDTVIHCEGEPIKREDEEESLNEVG 202
Query: 492 --DNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL 548
D +L K ++ELPL +P LF+ +G+ PP+G LLYGPPGTGKTL+ARAVA++
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 549 DANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADR 608
A F + I+ K GES +R+ F A + P IIF+DE+DAI +R E T +
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEV 320
Query: 609 EIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLE 668
E +R + +LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RLE
Sbjct: 321 E-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLE 379
Query: 669 ILKIH 673
IL+IH
Sbjct: 380 ILQIH 384
Score = 315 (115.9 bits), Expect = 2.3e-42, Sum P(2) = 2.3e-42
Identities = 78/235 (33%), Positives = 126/235 (53%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI---- 311
L + + + + ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 527 LAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
Query: 312 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 371
GG G +ADR I ++L +MDG + V +I ATNRPD +DPA+LRPGRLD+
Sbjct: 587 GGNIGDGGGAADRVIN----QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQL 642
Query: 372 IEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI 431
I IPLP+E++R+A ++ P+AK ++D + + K+++ F+GADL +C A AI
Sbjct: 643 IYIPLPDEKSRIA-ILKANLRKSPVAK--DVDLDFLAKMTNGFSGADLTEICQRACKLAI 699
Query: 432 RSEREY-VTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
R E + +E + + ++ D R + A+R R V+ D K
Sbjct: 700 RESIENEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 754
Score = 217 (81.4 bits), Expect = 1.0e-84, Sum P(2) = 1.0e-84
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 212 GPPGTGKTLLARAVASQLDANFLKV 236
GPPGTGKTL+ARAVA++ A F +
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLI 269
Score = 205 (77.2 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 177
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 178 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 542
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 647 (232.8 bits), Expect = 1.3e-84, Sum P(2) = 1.3e-84
Identities = 159/422 (37%), Positives = 241/422 (57%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F I+ K GES +R+ F A + P IIF+DE+DAI +R E T + E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-R 322
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RL
Sbjct: 323 RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI-- 380
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQED-FMKA 446
+ IH + ++D E V + GADL +C+EA L AIR + + + ED + A
Sbjct: 381 -LQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDA 439
Query: 447 VRKVSDNKKLDHCNSYRTEAGLFAIRS---EREYVTQEDFMKAVRKVSDNKKLESKLDYK 503
S +D +++ A+R E +T ED + + D K+ + +
Sbjct: 440 EVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWED----IGGLDDVKR-----ELQ 490
Query: 504 PVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 563
+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ + ++
Sbjct: 491 ELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 550
Query: 564 YIGESARLIREMFNYARNHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLMELLN 619
+ GES +RE+F+ AR PC++F DE+D+I GG G +ADR I ++L
Sbjct: 551 WFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVIN----QILT 606
Query: 620 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPI 677
+MDG S V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E++R+ ILK + PI
Sbjct: 607 EMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPI 666
Query: 678 AK 679
+K
Sbjct: 667 SK 668
Score = 410 (149.4 bits), Expect = 3.7e-35, P = 3.7e-35
Identities = 121/342 (35%), Positives = 181/342 (52%)
Query: 344 GQVKMIMATNRPDTLDPALLRPGRLDRKIE---IPLPNEQARLAHTWPISIHAGPIAKHG 400
G ++ R +T+ L D K+ + N + RL ISI P K+G
Sbjct: 54 GDTVLLKGKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDV--ISIQPCPDVKYG 111
Query: 401 EIDYEAVVKLSDSFNG--ADLRNVCTEAG-LFAIRSER--EYVTQEDFMKAVR-KVSDNK 454
+ + V+ + D+ G +L V + L A R R + M+AV KV +
Sbjct: 112 KRIH--VLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETD 169
Query: 455 KLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVS--DNKKLESKL-DYKPVIELPLL 511
+C A I E E + +ED +++ +V D + +L K ++ELPL
Sbjct: 170 PSPYC----IVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLR 225
Query: 512 NPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARL 571
+P LF+ +G+ PP+G LLYGPPGTGKTL+ARAVA++ A F + I+ K GES
Sbjct: 226 HPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESN 285
Query: 572 IREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVK 631
+R+ F A + P IIF+DE+DAI +R E T + E +R + +LL MDG V
Sbjct: 286 LRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVI 342
Query: 632 MIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
++ ATNRP+++DPAL R GR DR+++I +P+ RLEIL+IH
Sbjct: 343 VMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIH 384
Score = 316 (116.3 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 79/235 (33%), Positives = 126/235 (53%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI---- 311
L + + + + ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 527 LAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
Query: 312 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 371
GG G +ADR I ++L +MDG S V +I ATNRPD +DPA+LRPGRLD+
Sbjct: 587 GGNVGDGGGAADRVIN----QILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQL 642
Query: 372 IEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI 431
I IPLP+E++R+A ++ PI+K ++D + + K+++ F+GADL +C A AI
Sbjct: 643 IYIPLPDEKSRIA-ILKANLRKSPISK--DVDLDFLAKMTNGFSGADLTEICQRACKLAI 699
Query: 432 RSEREY-VTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
R E + +E + + ++ D R + A+R R V+ D K
Sbjct: 700 RESIENEIRRERERQTNPSAMEVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRK 754
Score = 219 (82.2 bits), Expect = 1.3e-84, Sum P(2) = 1.3e-84
Identities = 39/85 (45%), Positives = 60/85 (70%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ E ++ Y IGG+ +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 212 GPPGTGKTLLARAVASQLDANFLKV 236
GPPGTGKTL+ARAVA++ A F +
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLI 269
Score = 207 (77.9 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 44/119 (36%), Positives = 73/119 (61%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 177
R+++D L+ T A M +L + R+ + +P + + +IT+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWEDIGGLD 483
Query: 178 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 542
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 648 (233.2 bits), Expect = 1.7e-84, Sum P(2) = 1.7e-84
Identities = 155/424 (36%), Positives = 239/424 (56%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F I+ K GES +R+ F A + P IIF+DE+DAI +R E T + E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-R 322
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RL
Sbjct: 323 RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEI-- 380
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ IH + ++D E V + GADL +C+EA L AIR + + + ED + +
Sbjct: 381 -LQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED--ETI 437
Query: 448 RKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKV-SDNKKLES-KLDYKPV 505
N + +R +A+ +E ++ + D LE K + + +
Sbjct: 438 DAEVMNSLAVTMDDFR-----WALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQEL 492
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ + ++ +
Sbjct: 493 VQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWF 552
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLMELLNQM 621
GES +RE+F+ AR PC++F DE+D+I GG G +ADR I ++L +M
Sbjct: 553 GESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN----QILTEM 608
Query: 622 DGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAK 679
DG V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E++R+ ILK + P+AK
Sbjct: 609 DGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAK 668
Query: 680 HGEI 683
++
Sbjct: 669 DVDV 672
Score = 408 (148.7 bits), Expect = 6.0e-35, P = 6.0e-35
Identities = 115/305 (37%), Positives = 168/305 (55%)
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNG--ADLRNVCTEAG-LFAIRSE 434
N + RL ISI P K+G+ + V+ + D+ G +L V + L A R
Sbjct: 91 NLRVRLGDV--ISIQPCPDVKYGKRVH--VLPIDDTVEGITGNLFEVYLKPYFLEAYRPI 146
Query: 435 R--EYVTQEDFMKAVR-KVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVS 491
R + M+AV KV + +C A I E E + +ED +++ +V
Sbjct: 147 RKGDIFLVRGGMRAVEFKVVETDPSPYC----IVAPDTVIHCEGEPIKREDEEESLNEVG 202
Query: 492 --DNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL 548
D +L K ++ELPL +P LF+ +G+ PP+G LLYGPPGTGKTL+ARAVA++
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 549 DANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADR 608
A F + I+ K GES +R+ F A + P IIF+DE+DAI +R E T +
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEV 320
Query: 609 EIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLE 668
E +R + +LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RLE
Sbjct: 321 E-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLE 379
Query: 669 ILKIH 673
IL+IH
Sbjct: 380 ILQIH 384
Score = 312 (114.9 bits), Expect = 4.9e-42, Sum P(2) = 4.9e-42
Identities = 79/235 (33%), Positives = 125/235 (53%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI---- 311
L + + + + ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 527 LAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
Query: 312 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 371
GG G +ADR I ++L +MDG V +I ATNRPD +DPA+LRPGRLD+
Sbjct: 587 GGNIGDGGGAADRVIN----QILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQL 642
Query: 372 IEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI 431
I IPLP+E++R+A ++ P+AK ++D+ A K+++ F+GADL +C A AI
Sbjct: 643 IYIPLPDEKSRMA-ILKANLRKSPVAKDVDVDFLA--KMTNGFSGADLTEICQRACKLAI 699
Query: 432 RSEREY-VTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
R E + +E + + ++ D R + A+R R V+ D K
Sbjct: 700 RESIENEIRRERDRQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 754
Score = 217 (81.4 bits), Expect = 1.7e-84, Sum P(2) = 1.7e-84
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 212 GPPGTGKTLLARAVASQLDANFLKV 236
GPPGTGKTL+ARAVA++ A F +
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLI 269
Score = 205 (77.2 bits), Expect = 8.9e-41, Sum P(2) = 8.9e-41
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 177
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 178 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 542
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 637 (229.3 bits), Expect = 1.7e-84, Sum P(2) = 1.7e-84
Identities = 164/418 (39%), Positives = 231/418 (55%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
I+ K+ GE+ +R++F A P IIF+DE+DA+ +R EG + E +R + LL
Sbjct: 423 IISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQNEVE-KRVVASLLT 479
Query: 336 QMDGFDSL---GQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIH 392
MDG S GQV ++ ATNRP LD AL RPGR D++IEI +PN Q RL +
Sbjct: 480 LMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRR 539
Query: 393 AGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE-REYVTQEDFMKA-VRKV 450
+ E+ + + + GADL+ +C EAGL A+R ++ D A + K+
Sbjct: 540 VPHLLTEAEL--LQLANSAHGYVGADLKVLCNEAGLCALRRILKKQPNLPDVKVAGLVKI 597
Query: 451 SDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLES-KLDYKPVIELP 509
+ L N R A RE D SD LES KL + +E P
Sbjct: 598 TLKDFLQAMNDIRPSA-------MREIAI--DVPNV--SWSDIGGLESIKLKLEQAVEWP 646
Query: 510 LLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESA 569
L +PE F R+GI PPKG LLYGPPG KT++A+A+A++ NFL + +++KY+GES
Sbjct: 647 LKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESE 706
Query: 570 RLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQ 629
R +RE F AR P IIF DE+DA+ R S A R L +LL +MDG + L
Sbjct: 707 RAVRETFRKARAVAPSIIFFDELDALAVERGSS-LGAGNVADRVLAQLLTEMDGIEQLKD 765
Query: 630 VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKI--HAGPIAKHGEIGD 685
V ++ ATNRPD +D AL+RPGR+DR I +PLP+ R EI K+ H+ P++ ++ +
Sbjct: 766 VTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDE 823
Score = 382 (139.5 bits), Expect = 6.1e-32, P = 6.1e-32
Identities = 87/181 (48%), Positives = 121/181 (66%)
Query: 496 LESKLD-YKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 554
L S+L + +IELPL PELF+ GI P+G LLYGPPGTGKT++ARAVA+++ A ++
Sbjct: 358 LSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGA-YVS 416
Query: 555 VVSSA-IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRT 613
V++ I+ K+ GE+ +R++F A P IIF+DE+DA+ +R EG + E +R
Sbjct: 417 VINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQNEVE-KRV 473
Query: 614 LMELLNQMDGFDSL---GQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEIL 670
+ LL MDG S GQV ++ ATNRP LD AL RPGR D++IEI +PN Q RL+IL
Sbjct: 474 VASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDIL 533
Query: 671 K 671
+
Sbjct: 534 Q 534
Score = 317 (116.6 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 67/178 (37%), Positives = 107/178 (60%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
+++KY+GES R +RE F AR P IIF DE+DA+ R S A R L +LL
Sbjct: 697 LMNKYVGESERAVRETFRKARAVAPSIIFFDELDALAVERGSS-LGAGNVADRVLAQLLT 755
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
+MDG + L V ++ ATNRPD +D AL+RPGR+DR I +PLP+ R + + H+ P
Sbjct: 756 EMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATR-REIFKLQFHSMP 814
Query: 396 IAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSERE--YVTQEDFMKAVRKVS 451
++ E+D + ++ +D+++GA++ VC EA L A+ + + + + F +A+ V+
Sbjct: 815 VSN--EVDLDELILQTDAYSGAEIVAVCREAALLALEEDIQANLIMKRHFTQALSTVT 870
Score = 228 (85.3 bits), Expect = 1.7e-84, Sum P(2) = 1.7e-84
Identities = 43/78 (55%), Positives = 60/78 (76%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+TY IGGLS Q++ +RE+IELPL PELF+ GI P+G LLYGPPGTGKT++ARAVA+
Sbjct: 350 VTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVAN 409
Query: 228 QLDANFLKVVSSLFVTSK 245
++ A ++ V++ + SK
Sbjct: 410 EVGA-YVSVINGPEIISK 426
Score = 191 (72.3 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 46/118 (38%), Positives = 70/118 (59%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTIMRYLP--REVDPLVYNMSHEDPGDITYSAIGGLSEQ 179
RR L K +VA + +T+ +L ++ P D ++++S IGGL E
Sbjct: 577 RRILKKQPNLPDVKVA-GLVKITLKDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGL-ES 634
Query: 180 IR-ELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
I+ +L + +E PL +PE F R+GI PPKG LLYGPPG KT++A+A+A++ NFL +
Sbjct: 635 IKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAI 692
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 647 (232.8 bits), Expect = 2.2e-84, Sum P(2) = 2.2e-84
Identities = 155/420 (36%), Positives = 238/420 (56%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F I+ K GES +R+ F A + P IIF+DE+DAI +R E T + E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-R 322
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RL
Sbjct: 323 RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI-- 380
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ IH + ++D E V + GADL +C+EA L AIR + + + ED + +
Sbjct: 381 -LQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED--ETI 437
Query: 448 RKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKV-SDNKKLES-KLDYKPV 505
N + +R +A+ +E ++ + D LE K + + +
Sbjct: 438 DAEVMNSLAVTMDDFR-----WALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQEL 492
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ + ++ +
Sbjct: 493 VQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWF 552
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLMELLNQM 621
GES +RE+F+ AR PC++F DE+D+I GG G +ADR I ++L +M
Sbjct: 553 GESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN----QILTEM 608
Query: 622 DGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAK 679
DG + V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E++R+ ILK + P+AK
Sbjct: 609 DGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAK 668
Score = 407 (148.3 bits), Expect = 7.9e-35, P = 7.9e-35
Identities = 115/305 (37%), Positives = 168/305 (55%)
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNG--ADLRNVCTEAG-LFAIRSE 434
N + RL ISI P K+G+ + V+ + D+ G +L V + L A R
Sbjct: 91 NLRVRLGDV--ISIQPCPDVKYGKRIH--VLPIDDTVEGITGNLFEVYLKPYFLEAYRPI 146
Query: 435 R--EYVTQEDFMKAVR-KVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVS 491
R + M+AV KV + +C A I E E + +ED +++ +V
Sbjct: 147 RKGDIFLVRGGMRAVEFKVVETDPSPYC----IVAPDTVIHCEGEPIKREDEEESLNEVG 202
Query: 492 --DNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL 548
D +L K ++ELPL +P LF+ +G+ PP+G LLYGPPGTGKTL+ARAVA++
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 549 DANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADR 608
A F + I+ K GES +R+ F A + P IIF+DE+DAI +R E T +
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEV 320
Query: 609 EIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLE 668
E +R + +LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RLE
Sbjct: 321 E-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 379
Query: 669 ILKIH 673
IL+IH
Sbjct: 380 ILQIH 384
Score = 317 (116.6 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 79/235 (33%), Positives = 126/235 (53%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI---- 311
L + + + + ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 527 LAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
Query: 312 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 371
GG G +ADR I ++L +MDG + V +I ATNRPD +DPA+LRPGRLD+
Sbjct: 587 GGNIGDGGGAADRVIN----QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQL 642
Query: 372 IEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI 431
I IPLP+E++R+A ++ P+AK ++D E + K+++ F+GADL +C A AI
Sbjct: 643 IYIPLPDEKSRVA-ILKANLRKSPVAK--DVDLEFLAKMTNGFSGADLTEICQRACKLAI 699
Query: 432 RSEREY-VTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
R E + +E + + ++ D R + A+R R V+ D K
Sbjct: 700 RESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 754
Score = 217 (81.4 bits), Expect = 2.2e-84, Sum P(2) = 2.2e-84
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 212 GPPGTGKTLLARAVASQLDANFLKV 236
GPPGTGKTL+ARAVA++ A F +
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLI 269
Score = 205 (77.2 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 177
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 178 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 542
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 647 (232.8 bits), Expect = 2.2e-84, Sum P(2) = 2.2e-84
Identities = 155/420 (36%), Positives = 238/420 (56%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F I+ K GES +R+ F A + P IIF+DE+DAI +R E T + E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-R 322
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RL
Sbjct: 323 RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI-- 380
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ IH + ++D E V + GADL +C+EA L AIR + + + ED + +
Sbjct: 381 -LQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED--ETI 437
Query: 448 RKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKV-SDNKKLES-KLDYKPV 505
N + +R +A+ +E ++ + D LE K + + +
Sbjct: 438 DAEVMNSLAVTMDDFR-----WALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQEL 492
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ + ++ +
Sbjct: 493 VQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWF 552
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLMELLNQM 621
GES +RE+F+ AR PC++F DE+D+I GG G +ADR I ++L +M
Sbjct: 553 GESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN----QILTEM 608
Query: 622 DGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAK 679
DG + V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E++R+ ILK + P+AK
Sbjct: 609 DGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAK 668
Score = 407 (148.3 bits), Expect = 7.9e-35, P = 7.9e-35
Identities = 115/305 (37%), Positives = 168/305 (55%)
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNG--ADLRNVCTEAG-LFAIRSE 434
N + RL ISI P K+G+ + V+ + D+ G +L V + L A R
Sbjct: 91 NLRVRLGDV--ISIQPCPDVKYGKRIH--VLPIDDTVEGITGNLFEVYLKPYFLEAYRPI 146
Query: 435 R--EYVTQEDFMKAVR-KVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVS 491
R + M+AV KV + +C A I E E + +ED +++ +V
Sbjct: 147 RKGDIFLVRGGMRAVEFKVVETDPSPYC----IVAPDTVIHCEGEPIKREDEEESLNEVG 202
Query: 492 --DNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL 548
D +L K ++ELPL +P LF+ +G+ PP+G LLYGPPGTGKTL+ARAVA++
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 549 DANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADR 608
A F + I+ K GES +R+ F A + P IIF+DE+DAI +R E T +
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEV 320
Query: 609 EIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLE 668
E +R + +LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RLE
Sbjct: 321 E-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 379
Query: 669 ILKIH 673
IL+IH
Sbjct: 380 ILQIH 384
Score = 317 (116.6 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 79/235 (33%), Positives = 126/235 (53%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI---- 311
L + + + + ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 527 LAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
Query: 312 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 371
GG G +ADR I ++L +MDG + V +I ATNRPD +DPA+LRPGRLD+
Sbjct: 587 GGNIGDGGGAADRVIN----QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQL 642
Query: 372 IEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI 431
I IPLP+E++R+A ++ P+AK ++D E + K+++ F+GADL +C A AI
Sbjct: 643 IYIPLPDEKSRVA-ILKANLRKSPVAK--DVDLEFLAKMTNGFSGADLTEICQRACKLAI 699
Query: 432 RSEREY-VTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
R E + +E + + ++ D R + A+R R V+ D K
Sbjct: 700 RESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 754
Score = 217 (81.4 bits), Expect = 2.2e-84, Sum P(2) = 2.2e-84
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 212 GPPGTGKTLLARAVASQLDANFLKV 236
GPPGTGKTL+ARAVA++ A F +
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLI 269
Score = 205 (77.2 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 177
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 178 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 542
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 647 (232.8 bits), Expect = 2.2e-84, Sum P(2) = 2.2e-84
Identities = 155/420 (36%), Positives = 238/420 (56%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F I+ K GES +R+ F A + P IIF+DE+DAI +R E T + E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-R 322
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RL
Sbjct: 323 RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI-- 380
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ IH + ++D E V + GADL +C+EA L AIR + + + ED + +
Sbjct: 381 -LQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED--ETI 437
Query: 448 RKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKV-SDNKKLES-KLDYKPV 505
N + +R +A+ +E ++ + D LE K + + +
Sbjct: 438 DAEVMNSLAVTMDDFR-----WALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQEL 492
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ + ++ +
Sbjct: 493 VQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWF 552
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLMELLNQM 621
GES +RE+F+ AR PC++F DE+D+I GG G +ADR I ++L +M
Sbjct: 553 GESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN----QILTEM 608
Query: 622 DGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAK 679
DG + V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E++R+ ILK + P+AK
Sbjct: 609 DGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAK 668
Score = 407 (148.3 bits), Expect = 7.9e-35, P = 7.9e-35
Identities = 115/305 (37%), Positives = 168/305 (55%)
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNG--ADLRNVCTEAG-LFAIRSE 434
N + RL ISI P K+G+ + V+ + D+ G +L V + L A R
Sbjct: 91 NLRVRLGDV--ISIQPCPDVKYGKRIH--VLPIDDTVEGITGNLFEVYLKPYFLEAYRPI 146
Query: 435 R--EYVTQEDFMKAVR-KVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVS 491
R + M+AV KV + +C A I E E + +ED +++ +V
Sbjct: 147 RKGDIFLVRGGMRAVEFKVVETDPSPYC----IVAPDTVIHCEGEPIKREDEEESLNEVG 202
Query: 492 --DNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL 548
D +L K ++ELPL +P LF+ +G+ PP+G LLYGPPGTGKTL+ARAVA++
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 549 DANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADR 608
A F + I+ K GES +R+ F A + P IIF+DE+DAI +R E T +
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEV 320
Query: 609 EIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLE 668
E +R + +LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RLE
Sbjct: 321 E-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 379
Query: 669 ILKIH 673
IL+IH
Sbjct: 380 ILQIH 384
Score = 317 (116.6 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 79/235 (33%), Positives = 126/235 (53%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI---- 311
L + + + + ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 527 LAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
Query: 312 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 371
GG G +ADR I ++L +MDG + V +I ATNRPD +DPA+LRPGRLD+
Sbjct: 587 GGNIGDGGGAADRVIN----QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQL 642
Query: 372 IEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI 431
I IPLP+E++R+A ++ P+AK ++D E + K+++ F+GADL +C A AI
Sbjct: 643 IYIPLPDEKSRVA-ILKANLRKSPVAK--DVDLEFLAKMTNGFSGADLTEICQRACKLAI 699
Query: 432 RSEREY-VTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
R E + +E + + ++ D R + A+R R V+ D K
Sbjct: 700 RESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 754
Score = 217 (81.4 bits), Expect = 2.2e-84, Sum P(2) = 2.2e-84
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 212 GPPGTGKTLLARAVASQLDANFLKV 236
GPPGTGKTL+ARAVA++ A F +
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLI 269
Score = 205 (77.2 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 177
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 178 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 542
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 647 (232.8 bits), Expect = 2.2e-84, Sum P(2) = 2.2e-84
Identities = 155/420 (36%), Positives = 238/420 (56%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F I+ K GES +R+ F A + P IIF+DE+DAI +R E T + E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-R 322
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RL
Sbjct: 323 RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI-- 380
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ IH + ++D E V + GADL +C+EA L AIR + + + ED + +
Sbjct: 381 -LQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED--ETI 437
Query: 448 RKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKV-SDNKKLES-KLDYKPV 505
N + +R +A+ +E ++ + D LE K + + +
Sbjct: 438 DAEVMNSLAVTMDDFR-----WALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQEL 492
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ + ++ +
Sbjct: 493 VQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWF 552
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLMELLNQM 621
GES +RE+F+ AR PC++F DE+D+I GG G +ADR I ++L +M
Sbjct: 553 GESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN----QILTEM 608
Query: 622 DGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAK 679
DG + V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E++R+ ILK + P+AK
Sbjct: 609 DGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAK 668
Score = 406 (148.0 bits), Expect = 1.0e-34, P = 1.0e-34
Identities = 90/206 (43%), Positives = 130/206 (63%)
Query: 471 IRSEREYVTQEDFMKAVRKVS--DNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGC 527
I E E + +ED +++ +V D +L K ++ELPL +P LF+ +G+ PP+G
Sbjct: 182 IHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGI 241
Query: 528 LLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCII 587
LLYGPPGTGKTL+ARAVA++ A F + I+ K GES +R+ F A + P II
Sbjct: 242 LLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAII 301
Query: 588 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALL 647
F+DE+DAI +R E T + E +R + +LL MDG V ++ ATNRP+++DPAL
Sbjct: 302 FIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALR 358
Query: 648 RPGRLDRKIEIPLPNEQARLEILKIH 673
R GR DR+++I +P+ RLEIL+IH
Sbjct: 359 RFGRFDREVDIGIPDATGRLEILQIH 384
Score = 317 (116.6 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 79/235 (33%), Positives = 126/235 (53%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI---- 311
L + + + + ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 527 LAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
Query: 312 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 371
GG G +ADR I ++L +MDG + V +I ATNRPD +DPA+LRPGRLD+
Sbjct: 587 GGNIGDGGGAADRVIN----QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQL 642
Query: 372 IEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI 431
I IPLP+E++R+A ++ P+AK ++D E + K+++ F+GADL +C A AI
Sbjct: 643 IYIPLPDEKSRVA-ILKANLRKSPVAK--DVDLEFLAKMTNGFSGADLTEICQRACKLAI 699
Query: 432 RSEREY-VTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
R E + +E + + ++ D R + A+R R V+ D K
Sbjct: 700 RESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 754
Score = 217 (81.4 bits), Expect = 2.2e-84, Sum P(2) = 2.2e-84
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 212 GPPGTGKTLLARAVASQLDANFLKV 236
GPPGTGKTL+ARAVA++ A F +
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLI 269
Score = 205 (77.2 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 177
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 178 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 542
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 647 (232.8 bits), Expect = 2.2e-84, Sum P(2) = 2.2e-84
Identities = 155/420 (36%), Positives = 238/420 (56%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F I+ K GES +R+ F A + P IIF+DE+DAI +R E T + E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-R 322
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RL
Sbjct: 323 RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI-- 380
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ IH + ++D E V + GADL +C+EA L AIR + + + ED + +
Sbjct: 381 -LQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED--ETI 437
Query: 448 RKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKV-SDNKKLES-KLDYKPV 505
N + +R +A+ +E ++ + D LE K + + +
Sbjct: 438 DAEVMNSLAVTMDDFR-----WALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQEL 492
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ + ++ +
Sbjct: 493 VQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWF 552
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLMELLNQM 621
GES +RE+F+ AR PC++F DE+D+I GG G +ADR I ++L +M
Sbjct: 553 GESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN----QILTEM 608
Query: 622 DGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAK 679
DG + V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E++R+ ILK + P+AK
Sbjct: 609 DGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAK 668
Score = 406 (148.0 bits), Expect = 1.0e-34, P = 1.0e-34
Identities = 90/206 (43%), Positives = 130/206 (63%)
Query: 471 IRSEREYVTQEDFMKAVRKVS--DNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGC 527
I E E + +ED +++ +V D +L K ++ELPL +P LF+ +G+ PP+G
Sbjct: 182 IHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGI 241
Query: 528 LLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCII 587
LLYGPPGTGKTL+ARAVA++ A F + I+ K GES +R+ F A + P II
Sbjct: 242 LLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAII 301
Query: 588 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALL 647
F+DE+DAI +R E T + E +R + +LL MDG V ++ ATNRP+++DPAL
Sbjct: 302 FIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALR 358
Query: 648 RPGRLDRKIEIPLPNEQARLEILKIH 673
R GR DR+++I +P+ RLEIL+IH
Sbjct: 359 RFGRFDREVDIGIPDATGRLEILQIH 384
Score = 317 (116.6 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 79/235 (33%), Positives = 126/235 (53%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI---- 311
L + + + + ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 527 LAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
Query: 312 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 371
GG G +ADR I ++L +MDG + V +I ATNRPD +DPA+LRPGRLD+
Sbjct: 587 GGNIGDGGGAADRVIN----QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQL 642
Query: 372 IEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI 431
I IPLP+E++R+A ++ P+AK ++D E + K+++ F+GADL +C A AI
Sbjct: 643 IYIPLPDEKSRVA-ILKANLRKSPVAK--DVDLEFLAKMTNGFSGADLTEICQRACKLAI 699
Query: 432 RSEREY-VTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
R E + +E + + ++ D R + A+R R V+ D K
Sbjct: 700 RESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 754
Score = 217 (81.4 bits), Expect = 2.2e-84, Sum P(2) = 2.2e-84
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 212 GPPGTGKTLLARAVASQLDANFLKV 236
GPPGTGKTL+ARAVA++ A F +
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLI 269
Score = 205 (77.2 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 177
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 178 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 542
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 647 (232.8 bits), Expect = 2.2e-84, Sum P(2) = 2.2e-84
Identities = 155/420 (36%), Positives = 238/420 (56%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F I+ K GES +R+ F A + P IIF+DE+DAI +R E T + E +
Sbjct: 282 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-R 338
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RL
Sbjct: 339 RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI-- 396
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ IH + ++D E V + GADL +C+EA L AIR + + + ED + +
Sbjct: 397 -LQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED--ETI 453
Query: 448 RKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKV-SDNKKLES-KLDYKPV 505
N + +R +A+ +E ++ + D LE K + + +
Sbjct: 454 DAEVMNSLAVTMDDFR-----WALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQEL 508
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ + ++ +
Sbjct: 509 VQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWF 568
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLMELLNQM 621
GES +RE+F+ AR PC++F DE+D+I GG G +ADR I ++L +M
Sbjct: 569 GESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN----QILTEM 624
Query: 622 DGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAK 679
DG + V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E++R+ ILK + P+AK
Sbjct: 625 DGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAK 684
Score = 406 (148.0 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 90/206 (43%), Positives = 130/206 (63%)
Query: 471 IRSEREYVTQEDFMKAVRKVS--DNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGC 527
I E E + +ED +++ +V D +L K ++ELPL +P LF+ +G+ PP+G
Sbjct: 198 IHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGI 257
Query: 528 LLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCII 587
LLYGPPGTGKTL+ARAVA++ A F + I+ K GES +R+ F A + P II
Sbjct: 258 LLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAII 317
Query: 588 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALL 647
F+DE+DAI +R E T + E +R + +LL MDG V ++ ATNRP+++DPAL
Sbjct: 318 FIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALR 374
Query: 648 RPGRLDRKIEIPLPNEQARLEILKIH 673
R GR DR+++I +P+ RLEIL+IH
Sbjct: 375 RFGRFDREVDIGIPDATGRLEILQIH 400
Score = 317 (116.6 bits), Expect = 1.5e-42, Sum P(2) = 1.5e-42
Identities = 79/235 (33%), Positives = 126/235 (53%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI---- 311
L + + + + ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 543 LAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 602
Query: 312 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 371
GG G +ADR I ++L +MDG + V +I ATNRPD +DPA+LRPGRLD+
Sbjct: 603 GGNIGDGGGAADRVIN----QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQL 658
Query: 372 IEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI 431
I IPLP+E++R+A ++ P+AK ++D E + K+++ F+GADL +C A AI
Sbjct: 659 IYIPLPDEKSRVA-ILKANLRKSPVAK--DVDLEFLAKMTNGFSGADLTEICQRACKLAI 715
Query: 432 RSEREY-VTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
R E + +E + + ++ D R + A+R R V+ D K
Sbjct: 716 RESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 770
Score = 217 (81.4 bits), Expect = 2.2e-84, Sum P(2) = 2.2e-84
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 201 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 260
Query: 212 GPPGTGKTLLARAVASQLDANFLKV 236
GPPGTGKTL+ARAVA++ A F +
Sbjct: 261 GPPGTGKTLIARAVANETGAFFFLI 285
Score = 205 (77.2 bits), Expect = 2.7e-41, Sum P(2) = 2.7e-41
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 177
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 440 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 499
Query: 178 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 500 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 558
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 647 (232.8 bits), Expect = 2.2e-84, Sum P(2) = 2.2e-84
Identities = 155/420 (36%), Positives = 238/420 (56%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F I+ K GES +R+ F A + P IIF+DE+DAI +R E T + E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-R 322
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RL
Sbjct: 323 RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI-- 380
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ IH + ++D E V + GADL +C+EA L AIR + + + ED + +
Sbjct: 381 -LQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED--ETI 437
Query: 448 RKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKV-SDNKKLES-KLDYKPV 505
N + +R +A+ +E ++ + D LE K + + +
Sbjct: 438 DAEVMNSLAVTMDDFR-----WALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQDL 492
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ + ++ +
Sbjct: 493 VQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWF 552
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLMELLNQM 621
GES +RE+F+ AR PC++F DE+D+I GG G +ADR I ++L +M
Sbjct: 553 GESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN----QILTEM 608
Query: 622 DGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAK 679
DG + V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E++R+ ILK + P+AK
Sbjct: 609 DGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAK 668
Score = 406 (148.0 bits), Expect = 1.0e-34, P = 1.0e-34
Identities = 90/206 (43%), Positives = 130/206 (63%)
Query: 471 IRSEREYVTQEDFMKAVRKVS--DNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGC 527
I E E + +ED +++ +V D +L K ++ELPL +P LF+ +G+ PP+G
Sbjct: 182 IHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGI 241
Query: 528 LLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCII 587
LLYGPPGTGKTL+ARAVA++ A F + I+ K GES +R+ F A + P II
Sbjct: 242 LLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAII 301
Query: 588 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALL 647
F+DE+DAI +R E T + E +R + +LL MDG V ++ ATNRP+++DPAL
Sbjct: 302 FIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALR 358
Query: 648 RPGRLDRKIEIPLPNEQARLEILKIH 673
R GR DR+++I +P+ RLEIL+IH
Sbjct: 359 RFGRFDREVDIGIPDATGRLEILQIH 384
Score = 317 (116.6 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 79/235 (33%), Positives = 126/235 (53%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI---- 311
L + + + + ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 527 LAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
Query: 312 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 371
GG G +ADR I ++L +MDG + V +I ATNRPD +DPA+LRPGRLD+
Sbjct: 587 GGNIGDGGGAADRVIN----QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQL 642
Query: 372 IEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI 431
I IPLP+E++R+A ++ P+AK ++D E + K+++ F+GADL +C A AI
Sbjct: 643 IYIPLPDEKSRVA-ILKANLRKSPVAK--DVDLEFLAKMTNGFSGADLTEICQRACKLAI 699
Query: 432 RSEREY-VTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
R E + +E + + ++ D R + A+R R V+ D K
Sbjct: 700 RESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 754
Score = 217 (81.4 bits), Expect = 2.2e-84, Sum P(2) = 2.2e-84
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 212 GPPGTGKTLLARAVASQLDANFLKV 236
GPPGTGKTL+ARAVA++ A F +
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLI 269
Score = 202 (76.2 bits), Expect = 5.1e-41, Sum P(2) = 5.1e-41
Identities = 42/119 (35%), Positives = 72/119 (60%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 177
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 424 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 178 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
+ REL+++++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 484 DVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 542
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 642 (231.1 bits), Expect = 2.8e-84, Sum P(2) = 2.8e-84
Identities = 156/425 (36%), Positives = 239/425 (56%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F I+ K GES +R+ F A + P IIF+DEID+I +R E T+ + E +
Sbjct: 284 FFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR--EKTNGEVE-R 340
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG + V ++ ATNRP+++DPAL R GR DR+++I +P+ RL
Sbjct: 341 RVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEI-- 398
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVT-QEDFMKA 446
+ IH + ++D E + + + G+D+ +C+EA + IR + + + ED + A
Sbjct: 399 -LQIHTKNMKLGDDVDLEQIAAETHGYVGSDVAALCSEAAMQQIREKMDLIDLDEDTIDA 457
Query: 447 VRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKPVI 506
+V D+ + N +R G+ + RE E + VR E K D + +
Sbjct: 458 --EVLDSLGVTMEN-FRFALGVSNPSALREVAVVE--VPNVRWEDIGGLDEVKQDLREQV 512
Query: 507 ELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIG 566
+ P+ +PE F + G++P +G L YGPPGTGKT+LA+AVA++ ANF+ V ++ + G
Sbjct: 513 QYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFG 572
Query: 567 ESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDS 626
ES IR++F+ AR PCI+F+DE+D+I R A R + +LL +MDG S
Sbjct: 573 ESESNIRDIFDKARAAAPCIVFLDELDSIAKARGGSVGDAGGASDRVVNQLLTEMDGMTS 632
Query: 627 LGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAKHGEIG 684
V +I ATNRP+ LDPAL RPGRLD I +PLP+E RL ILK + P++ ++
Sbjct: 633 KKNVFVIGATNRPEQLDPALCRPGRLDSLIYVPLPDELGRLSILKAQLRKTPVSDDVDLQ 692
Query: 685 DAATK 689
A K
Sbjct: 693 YIANK 697
Score = 408 (148.7 bits), Expect = 6.4e-35, P = 6.4e-35
Identities = 85/183 (46%), Positives = 124/183 (67%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ ++ELPL +P+LF+ +GI PP+G LLYGPPGTGKTL+ARAVA++ A F + I+
Sbjct: 235 REMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLINGPEIMS 294
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
K GES +R+ F A + P IIF+DEID+I +R E T+ + E +R + +LL MD
Sbjct: 295 KMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR--EKTNGEVE-RRVVSQLLTLMD 351
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
G + V ++ ATNRP+++DPAL R GR DR+++I +P+ RLEIL+IH K+ +
Sbjct: 352 GMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILQIHT----KNMK 407
Query: 683 IGD 685
+GD
Sbjct: 408 LGD 410
Score = 267 (99.0 bits), Expect = 2.0e-37, Sum P(2) = 2.0e-37
Identities = 65/183 (35%), Positives = 101/183 (55%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
++ + GES IR++F+ AR PCI+F+DE+D+I R A R + +LL
Sbjct: 566 LLSMWFGESESNIRDIFDKARAAAPCIVFLDELDSIAKARGGSVGDAGGASDRVVNQLLT 625
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
+MDG S V +I ATNRP+ LDPAL RPGRLD I +PLP+E RL+ + P
Sbjct: 626 EMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDSLIYVPLPDELGRLS-ILKAQLRKTP 684
Query: 396 IAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQE-DFMKAVRKVSDNK 454
++ ++D + + + F+GADL + A AI+ E +T + + KA+ ++
Sbjct: 685 VSD--DVDLQYIANKTHGFSGADLGFITQRAVKIAIK---ESITADINRTKALEAAGEDV 739
Query: 455 KLD 457
+D
Sbjct: 740 PMD 742
Score = 221 (82.9 bits), Expect = 2.8e-84, Sum P(2) = 2.8e-84
Identities = 40/85 (47%), Positives = 61/85 (71%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ + + ++ Y IGG +Q+ ++RE++ELPL +P+LF+ +GI PP+G LLY
Sbjct: 203 EGEPIQRDEEENNLNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLY 262
Query: 212 GPPGTGKTLLARAVASQLDANFLKV 236
GPPGTGKTL+ARAVA++ A F +
Sbjct: 263 GPPGTGKTLMARAVANETGAFFFLI 287
Score = 188 (71.2 bits), Expect = 5.8e-34, Sum P(2) = 5.8e-34
Identities = 34/70 (48%), Positives = 52/70 (74%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++ + IGGL E ++LRE ++ P+ +PE F + G++P +G L YGPPGTGKT+LA+AVA
Sbjct: 492 NVRWEDIGGLDEVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVA 551
Query: 227 SQLDANFLKV 236
++ ANF+ V
Sbjct: 552 NECAANFISV 561
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 595 (214.5 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
Identities = 107/181 (59%), Positives = 141/181 (77%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S +V
Sbjct: 188 REVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 247
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE AR++RE+F AR+ + C+IF DEIDAIGG RF +G D E+QRT++EL+NQ+D
Sbjct: 248 KYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLD 307
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
GFD G +K++MATNRPDTLDPAL+RPGRLDRK+E LP++ R I KIHA ++ +
Sbjct: 308 GFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHARSMSVERD 367
Query: 683 I 683
I
Sbjct: 368 I 368
Score = 523 (189.2 bits), Expect = 5.7e-84, Sum P(2) = 5.7e-84
Identities = 95/193 (49%), Positives = 140/193 (72%)
Query: 258 RRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 317
R + + + S +V KY+GE AR++RE+F AR+ + C+IF DEIDAIGG RF
Sbjct: 227 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFD 286
Query: 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLP 377
+G D E+QRT++EL+NQ+DGFD G +K++MATNRPDTLDPAL+RPGRLDRK+E LP
Sbjct: 287 DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLP 346
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY 437
++ R +H + IHA ++ +I ++ + +L + GA++R+VCTEAG+FAIR+ R+
Sbjct: 347 DQDGR-SHIF--KIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKV 403
Query: 438 VTQEDFMKAVRKV 450
T++DF++AV+KV
Sbjct: 404 ATEKDFLEAVKKV 416
Score = 337 (123.7 bits), Expect = 5.7e-84, Sum P(2) = 5.7e-84
Identities = 92/245 (37%), Positives = 141/245 (57%)
Query: 14 LQDYRKKLTEHAEVEGR-LREMREQLKELTKQYDKSENDLKALQSVGQHDL--LLHCVRE 70
L D ++K+ +H E E + ++ + E EL K Y +S+ K+++S+ + D+ + V E
Sbjct: 5 LGDDQRKV-KHDEKEDKEIKSLDEGDIELLKTYGQSQYH-KSIKSI-EEDIQKAVKQVNE 61
Query: 71 Q--LKEL-TKQYDKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRR---- 123
+KE T + DL A + + Q V++C +I ++ P+Y++ ++
Sbjct: 62 LTGIKESDTGLAPPALWDLAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFAKF 121
Query: 124 QLDKAK------LKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 177
+D A ++ G RV +D I LP ++DP V M ED D+TYS +GG
Sbjct: 122 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCK 181
Query: 178 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 237
EQI +LREV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+
Sbjct: 182 EQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 241
Query: 238 SSLFV 242
S V
Sbjct: 242 GSELV 246
Score = 93 (37.8 bits), Expect = 7.4e-37, Sum P(2) = 7.4e-37
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 428 LFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAV 487
+F I + V ++ + ++ N S TEAG+FAIR+ R+ T++DF++AV
Sbjct: 354 IFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAV 413
Query: 488 RKV 490
+KV
Sbjct: 414 KKV 416
Score = 44 (20.5 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
Identities = 9/49 (18%), Positives = 26/49 (53%)
Query: 440 QEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVR 488
+ED KAV++V++ + ++ L+ + ++++ + E ++ R
Sbjct: 49 EEDIQKAVKQVNELTGIKESDTGLAPPALWDLAADKQILQNEQPLQVAR 97
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 640 (230.4 bits), Expect = 1.2e-83, Sum P(2) = 1.2e-83
Identities = 155/425 (36%), Positives = 242/425 (56%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F I+ K GES +R+ F A + P IIF+DEID+I +R E T+ + E +
Sbjct: 287 FFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR--EKTNGEVE-R 343
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG + V ++ ATNRP+++DPAL R GR DR+++I +P+ RL
Sbjct: 344 RVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEI-- 401
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVT-QEDFMKA 446
+SIH + ++D E + + + G+DL ++C+EA + IR + + + ED + A
Sbjct: 402 -LSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDEDTIDA 460
Query: 447 VRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKPVI 506
+V D+ + N +R G+ + RE E + VR E K + +
Sbjct: 461 --EVLDSLGVTMEN-FRYALGVSNPSALREVAVVE--VPNVRWEDIGGLEEVKRELIESV 515
Query: 507 ELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIG 566
+ P+ +PE FQ+ G++P +G L YGPPGTGKT+LA+AVA++ ANF+ V ++ + G
Sbjct: 516 QYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFG 575
Query: 567 ESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDS 626
ES IR++F+ AR PC++F+DE+D+I R A R + +LL +MDG S
Sbjct: 576 ESESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTS 635
Query: 627 LGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAKHGEIG 684
V +I ATNRP+ LD AL+RPGRLD + +PLP++ +R ILK + P+A +I
Sbjct: 636 KKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQASREGILKAQLRKTPVASDVDIE 695
Query: 685 DAATK 689
A+K
Sbjct: 696 FIASK 700
Score = 412 (150.1 bits), Expect = 2.3e-35, P = 2.3e-35
Identities = 94/221 (42%), Positives = 137/221 (61%)
Query: 471 IRSEREYVTQEDFMKAVRKVS--DNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGC 527
I SE E + +ED + +V D ++ + ++ELPL +P+LF+ +GI PP+G
Sbjct: 203 IHSEGEPIQREDEENNLNEVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGI 262
Query: 528 LLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCII 587
L+YGPPGTGKTL+ARAVA++ A F + I+ K GES +R+ F A + P II
Sbjct: 263 LMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAII 322
Query: 588 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALL 647
F+DEID+I +R E T+ + E +R + +LL MDG + V ++ ATNRP+++DPAL
Sbjct: 323 FIDEIDSIAPKR--EKTNGEVE-RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALR 379
Query: 648 RPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGEIGDAAT 688
R GR DR+++I +P+ RLEIL IH + K GE D T
Sbjct: 380 RFGRFDREVDIGIPDPTGRLEILSIHTKNM-KLGEDVDLET 419
Score = 254 (94.5 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
Identities = 58/157 (36%), Positives = 88/157 (56%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
++ + GES IR++F+ AR PC++F+DE+D+I R A R + +LL
Sbjct: 569 LLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLT 628
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
+MDG S V +I ATNRP+ LD AL+RPGRLD + +PLP++ +R + P
Sbjct: 629 EMDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQASREG-ILKAQLRKTP 687
Query: 396 IAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIR 432
+A ++D E + + F+GADL V A AI+
Sbjct: 688 VAS--DVDIEFIASKTHGFSGADLGFVTQRAVKLAIK 722
Score = 217 (81.4 bits), Expect = 1.2e-83, Sum P(2) = 1.2e-83
Identities = 39/85 (45%), Positives = 60/85 (70%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ + ++ Y IGG +Q+ ++RE++ELPL +P+LF+ +GI PP+G L+Y
Sbjct: 206 EGEPIQREDEENNLNEVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMY 265
Query: 212 GPPGTGKTLLARAVASQLDANFLKV 236
GPPGTGKTL+ARAVA++ A F +
Sbjct: 266 GPPGTGKTLMARAVANETGAFFFLI 290
Score = 194 (73.4 bits), Expect = 3.7e-33, Sum P(2) = 3.7e-33
Identities = 36/70 (51%), Positives = 52/70 (74%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++ + IGGL E REL E ++ P+ +PE FQ+ G++P +G L YGPPGTGKT+LA+AVA
Sbjct: 495 NVRWEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVA 554
Query: 227 SQLDANFLKV 236
++ ANF+ V
Sbjct: 555 NECAANFISV 564
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 654 (235.3 bits), Expect = 1.5e-83, Sum P(2) = 1.5e-83
Identities = 167/401 (41%), Positives = 236/401 (58%)
Query: 275 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 334
+IV KY+GE+ +R++FN AR +QP IIF+DEID+I R ++ S + E R + LL
Sbjct: 314 SIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDD-SGEVE-SRVVATLL 371
Query: 335 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARL-AHTWPISIHA 393
MDG + G+V +I ATNRP+++DPAL RPGR D+++EI +P+ AR T S +
Sbjct: 372 TLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQFSRMS 431
Query: 394 GPIAKHGEIDYEAVVKLSDS---FNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKV 450
+H +D EA+ ++ + GADL +C E+ + I +R T + K KV
Sbjct: 432 SD--RH-VLDSEAIKYIASKTHGYVGADLTALCRESVMKTI--QRGLGTDANIDKFSLKV 486
Query: 451 SDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKPVIELPL 510
+ K ++ + + I E V D + ++L++K+ K +I+LPL
Sbjct: 487 T-LKDVESAMVDIRPSAMREIFLEMPKVYWSD-------IGGQEELKTKM--KEMIQLPL 536
Query: 511 LNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESAR 570
E F R+GI+ PKG LLYGPPG KTL A+A+A++ NFL V I +KY+GES R
Sbjct: 537 EASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESER 596
Query: 571 LIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQV 630
IRE+F AR+ P IIF DEIDA+ R TSA + L LLN++DG + L V
Sbjct: 597 AIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSAANHV---LTSLLNEIDGVEELKGV 653
Query: 631 KMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
++ ATNRPD +D ALLRPGRLDR I + P+ ARLEILK
Sbjct: 654 VIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILK 694
Score = 422 (153.6 bits), Expect = 1.5e-36, P = 1.5e-36
Identities = 95/227 (41%), Positives = 141/227 (62%)
Query: 472 RSEREYVTQEDFMKAVRKVSDNKKLESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYG 531
++ R+Y E A D K++ES K IE+PL P LF G++PP+G LL+G
Sbjct: 231 QANRKYNLPEPLSYAAVGGLD-KEIES---LKSAIEIPLHQPTLFSSFGVSPPRGILLHG 286
Query: 532 PPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDE 591
PPGTGKT+L R VA+ +A+ L + +IV KY+GE+ +R++FN AR +QP IIF+DE
Sbjct: 287 PPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDE 346
Query: 592 IDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGR 651
ID+I R ++ S + E R + LL MDG + G+V +I ATNRP+++DPAL RPGR
Sbjct: 347 IDSIAPNRANDD-SGEVE-SRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGR 404
Query: 652 LDRKIEIPLPNEQARLEILKIHAGPIAKHGEIGDA-ATKWVLPFTAG 697
D+++EI +P+ AR +IL ++ + D+ A K++ T G
Sbjct: 405 FDQEVEIGIPDVDARFDILTKQFSRMSSDRHVLDSEAIKYIASKTHG 451
Score = 288 (106.4 bits), Expect = 7.6e-38, Sum P(2) = 7.6e-38
Identities = 77/200 (38%), Positives = 109/200 (54%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
I +KY+GES R IRE+F AR+ P IIF DEIDA+ R TSA + L LLN
Sbjct: 586 IFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSAANHV---LTSLLN 642
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
++DG + L V ++ ATNRPD +D ALLRPGRLDR I + P+ ARL +
Sbjct: 643 EIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFN- 701
Query: 396 IAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQE--DFMKAVRKVSDN 453
+ +D + ++ ++GA++ +C EAGL AI + + E F KA + ++
Sbjct: 702 -TEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAIMEDLDVAKVELRHFEKAFKGIARG 760
Query: 454 KKLDHCNSYRTEAGLFAIRS 473
+ SY E FA+RS
Sbjct: 761 ITPEML-SYYEE---FALRS 776
Score = 202 (76.2 bits), Expect = 1.5e-83, Sum P(2) = 1.5e-83
Identities = 36/78 (46%), Positives = 54/78 (69%)
Query: 159 NMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGK 218
N + P ++Y+A+GGL ++I L+ IE+PL P LF G++PP+G LL+GPPGTGK
Sbjct: 233 NRKYNLPEPLSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGK 292
Query: 219 TLLARAVASQLDANFLKV 236
T+L R VA+ +A+ L +
Sbjct: 293 TMLLRVVANTSNAHVLTI 310
Score = 177 (67.4 bits), Expect = 8.6e-35, Sum P(3) = 8.6e-35
Identities = 56/167 (33%), Positives = 81/167 (48%)
Query: 75 LTKQYDKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKS-G 133
LTKQ+ + +D L S ++ SK + G CR + K + G
Sbjct: 423 LTKQFSRMSSDRHVLDSE---AIKYIASKTHGYV-----GADLTALCRESVMKTIQRGLG 474
Query: 134 TRVALDMTTL--TIMRYLPREVD--PLVYNMSHEDPGDITYSAIGGLSEQIRELREVIEL 189
T +D +L T+ VD P + + +S IGG E +++E+I+L
Sbjct: 475 TDANIDKFSLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQL 534
Query: 190 PLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
PL E F R+GI+ PKG LLYGPPG KTL A+A+A++ NFL V
Sbjct: 535 PLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAV 581
Score = 40 (19.1 bits), Expect = 8.6e-35, Sum P(3) = 8.6e-35
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 26 EVEGRLREMREQLKELTKQYDKSENDLKALQS 57
EVE + ++ + LTKQ+ + +D L S
Sbjct: 408 EVEIGIPDVDARFDILTKQFSRMSSDRHVLDS 439
Score = 38 (18.4 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 6/25 (24%), Positives = 14/25 (56%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGL 176
E+D + N +++D G++ + L
Sbjct: 346 EIDSIAPNRANDDSGEVESRVVATL 370
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 641 (230.7 bits), Expect = 1.5e-83, Sum P(2) = 1.5e-83
Identities = 151/420 (35%), Positives = 238/420 (56%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F I+ K GES +R+ F A + P IIF+DEIDAI +R + T + E +
Sbjct: 263 FFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKR--DKTHGEVE-R 319
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG + ++ ATNRP+++DPAL R GR DR+I+I +P+ RL
Sbjct: 320 RIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLE--- 376
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ IH + H ++D E + S GADL ++C+EA L IR + + + ED
Sbjct: 377 VLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLED----- 431
Query: 448 RKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKV-SDNKKLES-KLDYKPV 505
K+ D + L + E +A+ +E ++ +D LES K + + +
Sbjct: 432 DKI-DAEVLASL-AVTMENFRYAMTKSSPSALRETVVEVPNTTWTDIGGLESVKKELQEL 489
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
++ P+ +P+ F + G+ P +G L YGPPG GKTLLA+A+A++ ANF+ V ++ +
Sbjct: 490 VQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 549
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 625
GES +R++F+ AR+ PC++F DE+D+I R A R + ++L +MDG
Sbjct: 550 GESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMG 609
Query: 626 SLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAKHGEI 683
+ V +I ATNRPD +DPA+LRPGRLD+ I IPLP++++R ILK + P+AK ++
Sbjct: 610 AKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAILKANLRKSPLAKEVDL 669
Score = 402 (146.6 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 81/181 (44%), Positives = 119/181 (65%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
K ++ELPL +P LF+ +G+ PP+G L+YGPPGTGKTL+ARAVA++ A F + I+
Sbjct: 214 KEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMS 273
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
K GES +R+ F A + P IIF+DEIDAI +R + T + E +R + +LL MD
Sbjct: 274 KLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKR--DKTHGEVE-RRIVSQLLTLMD 330
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
G + ++ ATNRP+++DPAL R GR DR+I+I +P+ RLE+L+IH + H +
Sbjct: 331 GMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLRIHTKNMKLHDD 390
Query: 683 I 683
+
Sbjct: 391 V 391
Score = 303 (111.7 bits), Expect = 7.8e-41, Sum P(2) = 7.8e-41
Identities = 73/204 (35%), Positives = 114/204 (55%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
++ + GES +R++F+ AR+ PC++F DE+D+I R A R + ++L
Sbjct: 544 LLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILT 603
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
+MDG + V +I ATNRPD +DPA+LRPGRLD+ I IPLP++++R A ++ P
Sbjct: 604 EMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREA-ILKANLRKSP 662
Query: 396 IAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRS------EREYVTQEDFMKAVRK 449
+AK E+D + K++ F+GADL +C A AIR RE E+ A+
Sbjct: 663 LAK--EVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEIRREKERAENQNSAMDM 720
Query: 450 VSDNKKLDHCNSYRTEAGLFAIRS 473
D+ + +++ EA FA RS
Sbjct: 721 DEDDPVPEITSAHFEEAMKFARRS 744
Score = 215 (80.7 bits), Expect = 1.5e-83, Sum P(2) = 1.5e-83
Identities = 38/83 (45%), Positives = 57/83 (68%)
Query: 154 DPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGP 213
DP+ E + Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G L+YGP
Sbjct: 184 DPIKREEEEESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGP 243
Query: 214 PGTGKTLLARAVASQLDANFLKV 236
PGTGKTL+ARAVA++ A F +
Sbjct: 244 PGTGKTLIARAVANETGAFFFLI 266
Score = 191 (72.3 bits), Expect = 2.6e-38, Sum P(2) = 2.6e-38
Identities = 63/227 (27%), Positives = 112/227 (49%)
Query: 13 TLQDYRKKLTEHAEV---EGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVR 69
TL D KK + H V R + L+ + +D+ E D+ + G+ ++L R
Sbjct: 327 TLMDGMKK-SSHLIVMAATNRPNSIDPALRRFGR-FDR-EIDIGIPDATGRLEVL----R 379
Query: 70 EQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAK 129
K + K +D + + A +S G V + S C ++ ++ L+ K
Sbjct: 380 IHTKNM-KLHDDVDLEQIAAESHGHVGADLA-SLCSEAALQQIREKMDLI----DLEDDK 433
Query: 130 LKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIEL 189
+ + +L +T + RY + P + + + T++ IGGL +EL+E+++
Sbjct: 434 IDAEVLASLAVT-MENFRYAMTKSSPSALRETVVEVPNTTWTDIGGLESVKKELQELVQY 492
Query: 190 PLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
P+ +P+ F + G+ P +G L YGPPG GKTLLA+A+A++ ANF+ V
Sbjct: 493 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISV 539
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 637 (229.3 bits), Expect = 2.5e-83, Sum P(2) = 2.5e-83
Identities = 151/421 (35%), Positives = 234/421 (55%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F I+ K GES +R+ F + P IIF+DE+DAI E++
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAIASDDCFPSPQTHGEVE 325
Query: 328 RTLM-ELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHT 386
R ++ +LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RL
Sbjct: 326 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI- 384
Query: 387 WPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKA 446
+ IH + ++D E V + GADL +C+EA L AIR + + + ED +
Sbjct: 385 --LQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED--ET 440
Query: 447 VRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKV-SDNKKLES-KLDYKP 504
+ N + +R +A+ +E ++ + D LE K + +
Sbjct: 441 IDAEVMNSLAVTMDDFR-----WALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQE 495
Query: 505 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKY 564
+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ + ++ +
Sbjct: 496 LVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMW 555
Query: 565 IGESARLIREMFNYARNHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLMELLNQ 620
GES +RE+F+ AR PC++F DE+D+I GG G +ADR I ++L +
Sbjct: 556 FGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN----QILTE 611
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIA 678
MDG + V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E++R+ ILK + P+A
Sbjct: 612 MDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVA 671
Query: 679 K 679
K
Sbjct: 672 K 672
Score = 397 (144.8 bits), Expect = 1.0e-33, P = 1.0e-33
Identities = 111/306 (36%), Positives = 164/306 (53%)
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNG--ADLRNVCTEAG-LFAIRSE 434
N + RL ISI P K+G+ + V+ + D+ G +L V + L A R
Sbjct: 91 NLRVRLGDV--ISIQPCPDVKYGKRIH--VLPIDDTVEGITGNLFEVYLKPYFLEAYRPI 146
Query: 435 R--EYVTQEDFMKAVR-KVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVS 491
R + M+AV KV + +C A I E E + +ED +++ +V
Sbjct: 147 RKGDIFLVRGGMRAVEFKVVETDPSPYC----IVAPDTVIHCEGEPIKREDEEESLNEVG 202
Query: 492 --DNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL 548
D +L K ++ELPL +P LF+ +G+ PP+G LLYGPPGTGKTL+ARAVA++
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 549 DANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADR 608
A F + I+ K GES +R+ F + P IIF+DE+DAI
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAIASDDCFPSPQTHG 322
Query: 609 EIQRTLM-ELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARL 667
E++R ++ +LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RL
Sbjct: 323 EVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRL 382
Query: 668 EILKIH 673
EIL+IH
Sbjct: 383 EILQIH 388
Score = 314 (115.6 bits), Expect = 3.0e-42, Sum P(2) = 3.0e-42
Identities = 78/235 (33%), Positives = 126/235 (53%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI---- 311
L + + + + ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 531 LAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 590
Query: 312 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 371
GG G +ADR I ++L +MDG + V +I ATNRPD +DPA+LRPGRLD+
Sbjct: 591 GGNIGDGGGAADRVIN----QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQL 646
Query: 372 IEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI 431
I IPLP+E++R+A ++ P+AK ++D + + K+++ F+GADL +C A AI
Sbjct: 647 IYIPLPDEKSRVA-ILKANLRKSPVAK--DVDLDFLAKMTNGFSGADLTEICQRACKLAI 703
Query: 432 RSEREY-VTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
R E + +E + + ++ D R + A+R R V+ D K
Sbjct: 704 RESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 758
Score = 217 (81.4 bits), Expect = 2.5e-83, Sum P(2) = 2.5e-83
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 212 GPPGTGKTLLARAVASQLDANFLKV 236
GPPGTGKTL+ARAVA++ A F +
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLI 269
Score = 205 (77.2 bits), Expect = 5.4e-41, Sum P(2) = 5.4e-41
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 177
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 428 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 487
Query: 178 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 488 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 546
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 601 (216.6 bits), Expect = 6.9e-61, Sum P(2) = 6.9e-61
Identities = 105/171 (61%), Positives = 141/171 (82%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+ELP+L+PE F ++GI PPKG L YGPPGTGKTLLARAVA++ DA F++V+ S +V
Sbjct: 181 REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ 240
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE AR++RE+F AR+ + CI+F DE+DAIGG RF +G D E+QRT++E++NQ+D
Sbjct: 241 KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD 300
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
GFD+ G +K++MATNRPDTLDPALLRPGRLDRK+E LP+ ++R +I KIH
Sbjct: 301 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIH 351
Score = 518 (187.4 bits), Expect = 6.6e-83, Sum P(2) = 6.6e-83
Identities = 96/195 (49%), Positives = 138/195 (70%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R + + + S +V KY+GE AR++RE+F AR+ + CI+F DE+DAIGG R
Sbjct: 218 LARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGAR 277
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F +G D E+QRT++E++NQ+DGFD+ G +K++MATNRPDTLDPALLRPGRLDRK+E
Sbjct: 278 FDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFG 337
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LP+ ++R T IH + +I +E + +L + GAD+R+VCTEAG++AIR+ R
Sbjct: 338 LPDLESR---TQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARR 394
Query: 436 EYVTQEDFMKAVRKV 450
+ VT++DF+ AV KV
Sbjct: 395 KTVTEKDFLDAVNKV 409
Score = 333 (122.3 bits), Expect = 6.6e-83, Sum P(2) = 6.6e-83
Identities = 79/212 (37%), Positives = 126/212 (59%)
Query: 31 LREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQ 90
++++ +++K+L K+ NDL ++ + D L + KQ + E L+ +
Sbjct: 38 IKKVEKEIKDLAKKI----NDLCGIK---ESDTGLAPPSQWDLVSDKQMMQEEQPLQVAR 90
Query: 91 SVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLP 150
+S +T +K + + VK ++VVG ++ ++ G RV +D I LP
Sbjct: 91 CTKIISPNTEDAK-YVINVKQI--AKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLP 147
Query: 151 REVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLL 210
++DP V M+ E+ D+TY+ +GG EQI ++REV+ELP+L+PE F ++GI PPKG L
Sbjct: 148 PKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLC 207
Query: 211 YGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
YGPPGTGKTLLARAVA++ DA F++V+ S V
Sbjct: 208 YGPPGTGKTLLARAVANRTDACFIRVIGSELV 239
Score = 85 (35.0 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
Identities = 16/27 (59%), Positives = 23/27 (85%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKV 490
TEAG++AIR+ R+ VT++DF+ AV KV
Sbjct: 383 TEAGMYAIRARRKTVTEKDFLDAVNKV 409
Score = 40 (19.1 bits), Expect = 6.9e-61, Sum P(2) = 6.9e-61
Identities = 20/78 (25%), Positives = 37/78 (47%)
Query: 369 DRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVC-TEAG 427
D K PL + L T+ + ++ PI K ++ E + L+ N DL + ++ G
Sbjct: 11 DEKNPRPLDEDDIALLKTYGLGPYSAPIKK---VEKE-IKDLAKKIN--DLCGIKESDTG 64
Query: 428 LFAIRSEREYVTQEDFMK 445
L A S+ + V+ + M+
Sbjct: 65 L-APPSQWDLVSDKQMMQ 81
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 585 (211.0 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 104/181 (57%), Positives = 140/181 (77%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+ELPLL+PE F ++GI PPKG LLYGPPGTGKTL ARAVA++ DA F++V+ S +V
Sbjct: 199 REVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQ 258
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE AR++RE+F AR + CIIF DE+DAIGG RF +G D E+QRT++EL+ Q+D
Sbjct: 259 KYVGEGARMVRELFEMARTKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELITQLD 318
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
GFD G +K++ ATNRP+TLDPALLRPGR+DRK+E LP+ + R I +IH+ ++ +
Sbjct: 319 GFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKTMSVEKD 378
Query: 683 I 683
I
Sbjct: 379 I 379
Score = 506 (183.2 bits), Expect = 8.5e-83, Sum P(2) = 8.5e-83
Identities = 97/206 (47%), Positives = 140/206 (67%)
Query: 258 RRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 317
R + + T+ S +V KY+GE AR++RE+F AR + CIIF DE+DAIGG RF
Sbjct: 238 RAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEVDAIGGARFD 297
Query: 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLP 377
+G D E+QRT++EL+ Q+DGFD G +K++ ATNRP+TLDPALLRPGR+DRK+E LP
Sbjct: 298 DGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLP 357
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY 437
+ + R A+ + IH+ ++ +I +E + +L + GA+LR+VCTEAG+FAIR+ R+
Sbjct: 358 DLEGR-ANIF--RIHSKTMSVEKDIRWELISRLCPNATGAELRSVCTEAGMFAIRARRKV 414
Query: 438 VTQEDFMKAVRKV-SDNKKLDHCNSY 462
++DF+KAV KV N K + Y
Sbjct: 415 ANEKDFLKAVDKVIKGNLKFSSTSQY 440
Score = 347 (127.2 bits), Expect = 8.5e-83, Sum P(2) = 8.5e-83
Identities = 90/218 (41%), Positives = 126/218 (57%)
Query: 26 EVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQLKELTKQYDKSEND 85
E+E L+ + E++K T Q K E+D L D+L R Q +E + Q +
Sbjct: 47 EIEKDLKTIEERIK--TNQGIK-ESDT-GLAPPHLWDVLGDKQRMQ-EEQSLQVARCTKI 101
Query: 86 LKALQSVGQVSLSTSVSKCWTVI-VKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLT 144
++A Q L + +K VI +K ++VVG +L ++ G RV +D
Sbjct: 102 IEASQPQQPTGLQNADTKSKYVINIKQI--AKFVVGLGERLSPTDIEEGMRVGVDRHKYE 159
Query: 145 IMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITP 204
I LP +DP V M+ E+ D+TYS +GG EQI +LREV+ELPLL+PE F ++GI P
Sbjct: 160 IQLPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDP 219
Query: 205 PKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
PKG LLYGPPGTGKTL ARAVA++ DA F++V+ S V
Sbjct: 220 PKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELV 257
Score = 105 (42.0 bits), Expect = 3.3e-39, Sum P(2) = 3.3e-39
Identities = 27/78 (34%), Positives = 41/78 (52%)
Query: 426 AGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
A +F I S+ V ++ + + ++ N S TEAG+FAIR+ R+ ++DF+K
Sbjct: 363 ANIFRIHSKTMSVEKDIRWELISRLCPNATGAELRSVCTEAGMFAIRARRKVANEKDFLK 422
Query: 486 AVRKV-SDNKKLESKLDY 502
AV KV N K S Y
Sbjct: 423 AVDKVIKGNLKFSSTSQY 440
Score = 43 (20.2 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 13/61 (21%), Positives = 25/61 (40%)
Query: 48 SENDLKALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKCWTV 107
+E D++ L++ G + LKE+ K E +K Q + + + W V
Sbjct: 26 TEGDIQVLKTYGTAPYA-----DSLKEIEKDLKTIEERIKTNQGIKESDTGLAPPHLWDV 80
Query: 108 I 108
+
Sbjct: 81 L 81
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 108/181 (59%), Positives = 139/181 (76%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F+ V+ S +V
Sbjct: 188 REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQ 247
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+NQ+D
Sbjct: 248 KYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLD 307
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
GFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP+ + R I KIHA ++ +
Sbjct: 308 GFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERD 367
Query: 683 I 683
I
Sbjct: 368 I 368
Score = 530 (191.6 bits), Expect = 1.1e-82, Sum P(2) = 1.1e-82
Identities = 98/193 (50%), Positives = 138/193 (71%)
Query: 258 RRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 317
R + + + P S +V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF
Sbjct: 227 RAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFD 286
Query: 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLP 377
+G D E+QRT++EL+NQ+DGFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP
Sbjct: 287 DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 346
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY 437
+ + R H + IHA ++ +I +E + +L + GA++R+VCTEAG+FAIR+ R+
Sbjct: 347 DLEGR-THIF--KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 438 VTQEDFMKAVRKV 450
T++DF++AV KV
Sbjct: 404 ATEKDFLEAVNKV 416
Score = 318 (117.0 bits), Expect = 1.1e-82, Sum P(2) = 1.1e-82
Identities = 85/238 (35%), Positives = 124/238 (52%)
Query: 18 RKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQ--LKEL 75
++K E + + +R + E L K Y +S + Q LL + E +KE
Sbjct: 9 QRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKES 68
Query: 76 -TKQYDKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRR----------Q 124
T + DL A + Q V++C +I + P+Y++ ++ Q
Sbjct: 69 DTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQ 128
Query: 125 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 184
+ ++ G RV +D I LP ++DP V M E+ D+TYS +GG EQI +LR
Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 188
Query: 185 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
EV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F+ V+ S V
Sbjct: 189 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELV 246
Score = 93 (37.8 bits), Expect = 8.6e-35, Sum P(2) = 8.6e-35
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 428 LFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAV 487
+F I + V ++ + + ++ N S TEAG+FAIR+ R+ T++DF++AV
Sbjct: 354 IFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAV 413
Query: 488 RKV 490
KV
Sbjct: 414 NKV 416
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 108/181 (59%), Positives = 139/181 (76%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F+ V+ S +V
Sbjct: 188 REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQ 247
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+NQ+D
Sbjct: 248 KYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLD 307
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
GFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP+ + R I KIHA ++ +
Sbjct: 308 GFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERD 367
Query: 683 I 683
I
Sbjct: 368 I 368
Score = 530 (191.6 bits), Expect = 1.1e-82, Sum P(2) = 1.1e-82
Identities = 98/193 (50%), Positives = 138/193 (71%)
Query: 258 RRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 317
R + + + P S +V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF
Sbjct: 227 RAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFD 286
Query: 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLP 377
+G D E+QRT++EL+NQ+DGFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP
Sbjct: 287 DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 346
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY 437
+ + R H + IHA ++ +I +E + +L + GA++R+VCTEAG+FAIR+ R+
Sbjct: 347 DLEGR-THIF--KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 438 VTQEDFMKAVRKV 450
T++DF++AV KV
Sbjct: 404 ATEKDFLEAVNKV 416
Score = 318 (117.0 bits), Expect = 1.1e-82, Sum P(2) = 1.1e-82
Identities = 85/238 (35%), Positives = 124/238 (52%)
Query: 18 RKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQ--LKEL 75
++K E + + +R + E L K Y +S + Q LL + E +KE
Sbjct: 9 QRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKES 68
Query: 76 -TKQYDKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRR----------Q 124
T + DL A + Q V++C +I + P+Y++ ++ Q
Sbjct: 69 DTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQ 128
Query: 125 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 184
+ ++ G RV +D I LP ++DP V M E+ D+TYS +GG EQI +LR
Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 188
Query: 185 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
EV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F+ V+ S V
Sbjct: 189 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELV 246
Score = 93 (37.8 bits), Expect = 8.6e-35, Sum P(2) = 8.6e-35
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 428 LFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAV 487
+F I + V ++ + + ++ N S TEAG+FAIR+ R+ T++DF++AV
Sbjct: 354 IFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAV 413
Query: 488 RKV 490
KV
Sbjct: 414 NKV 416
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 619 (223.0 bits), Expect = 1.3e-82, Sum P(2) = 1.3e-82
Identities = 148/416 (35%), Positives = 233/416 (56%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F ++ K GES +R+ F +QP I+F+DEIDAI +R E T+ + E +
Sbjct: 272 FFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKR--EKTNGEVE-R 328
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG + +I ATNRP+++D AL R GR DR+I+I +P+ RL
Sbjct: 329 RIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEI-- 386
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ IH + ++D E + F GADL ++C+EA L IR + E + ED
Sbjct: 387 -LRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDDQIDA 445
Query: 448 RKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLES-KLDYKPVI 506
+ N ++R G + + RE V + SD L++ K + + ++
Sbjct: 446 EVL--NSLAVTMENFRFAQGKSSPSALREAVVETPNTTW----SDIGGLQNVKRELQELV 499
Query: 507 ELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIG 566
+ P+ +PE + + G+ P +G L YGPPG GKTLLA+A+A++ ANF+ + ++ + G
Sbjct: 500 QYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFG 559
Query: 567 ESARLIREMFNYARNHQPCIIFMDEIDAIG-GRRFSEGTSADREIQRTLMELLNQMDGFD 625
ES +R++F+ AR PC++F DE+D+I R G R + ++L +MDG +
Sbjct: 560 ESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMN 619
Query: 626 SLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAK 679
+ V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E +R +ILK + P++K
Sbjct: 620 AKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSK 675
Score = 390 (142.3 bits), Expect = 6.2e-33, P = 6.2e-33
Identities = 80/171 (46%), Positives = 116/171 (67%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
K ++ELPL +P+LF+ +GI PP+G LL+GPPGTGKTL+ARAVA++ + F + ++
Sbjct: 223 KEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMS 282
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
K GES +R+ F +QP I+F+DEIDAI +R E T+ + E +R + +LL MD
Sbjct: 283 KMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKR--EKTNGEVE-RRIVSQLLTLMD 339
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
G + +I ATNRP+++D AL R GR DR+I+I +P+ RLEIL+IH
Sbjct: 340 GVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIH 390
Score = 277 (102.6 bits), Expect = 2.7e-39, Sum P(2) = 2.7e-39
Identities = 63/182 (34%), Positives = 99/182 (54%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIG-GR 314
L + + + + ++ + GES +R++F+ AR PC++F DE+D+I R
Sbjct: 533 LAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKAR 592
Query: 315 RFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEI 374
G R + ++L +MDG ++ V +I ATNRPD +DPA+LRPGRLD+ I I
Sbjct: 593 GGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYI 652
Query: 375 PLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE 434
PLP+E +R S+ P++K ++D + K + F+GADL +C A AIR
Sbjct: 653 PLPDEASR-HQILKASLRKTPLSK--DLDLTFLAKNTVGFSGADLTEICQRACKLAIRES 709
Query: 435 RE 436
E
Sbjct: 710 IE 711
Score = 228 (85.3 bits), Expect = 1.3e-82, Sum P(2) = 1.3e-82
Identities = 45/102 (44%), Positives = 70/102 (68%)
Query: 144 TIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGIT 203
T++ Y E DP+ E DI Y +GG+ +Q+ +++E++ELPL +P+LF+ +GI
Sbjct: 186 TMIHY---EGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIK 242
Query: 204 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSK 245
PP+G LL+GPPGTGKTL+ARAVA++ +F +++ V SK
Sbjct: 243 PPRGILLFGPPGTGKTLIARAVANET-GSFFFLINGPEVMSK 283
Score = 189 (71.6 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 36/95 (37%), Positives = 59/95 (62%)
Query: 142 TLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVG 201
T+ R+ + P + + + T+S IGGL REL+E+++ P+ +PE + + G
Sbjct: 454 TMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFG 513
Query: 202 ITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
+ P +G L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 514 MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISI 548
Score = 61 (26.5 bits), Expect = 8.4e-22, Sum P(2) = 8.4e-22
Identities = 37/176 (21%), Positives = 81/176 (46%)
Query: 41 LTKQYDKSENDL-KALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQV-SLS 98
++K +SE++L KA + ++ + + +++ + + +K+ +++ + V Q+ +L
Sbjct: 281 MSKMSGESESNLRKAFEECEKNQPAILFI-DEIDAIAPKREKTNGEVER-RIVSQLLTLM 338
Query: 99 TSVS-KCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRY------LPR 151
V + V++ ATN P + G R+ + + + + L I+R L
Sbjct: 339 DGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLAD 398
Query: 152 EVD-PLVYNMSHEDPG-DITYSAIGGLSEQIRELREVIELP--LLNPELFQRVGIT 203
+VD + N H G D+ +QIRE E+I+L ++ E+ + +T
Sbjct: 399 DVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDDQIDAEVLNSLAVT 454
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 619 (223.0 bits), Expect = 1.3e-82, Sum P(2) = 1.3e-82
Identities = 148/416 (35%), Positives = 233/416 (56%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F ++ K GES +R+ F +QP I+F+DEIDAI +R E T+ + E +
Sbjct: 272 FFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKR--EKTNGEVE-R 328
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG + +I ATNRP+++D AL R GR DR+I+I +P+ RL
Sbjct: 329 RIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEI-- 386
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ IH + ++D E + F GADL ++C+EA L IR + E + ED
Sbjct: 387 -LRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDDQIDA 445
Query: 448 RKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLES-KLDYKPVI 506
+ N ++R G + + RE V + SD L++ K + + ++
Sbjct: 446 EVL--NSLAVTMENFRFAQGKSSPSALREAVVETPNTTW----SDIGGLQNVKRELQELV 499
Query: 507 ELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIG 566
+ P+ +PE + + G+ P +G L YGPPG GKTLLA+A+A++ ANF+ + ++ + G
Sbjct: 500 QYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFG 559
Query: 567 ESARLIREMFNYARNHQPCIIFMDEIDAIG-GRRFSEGTSADREIQRTLMELLNQMDGFD 625
ES +R++F+ AR PC++F DE+D+I R G R + ++L +MDG +
Sbjct: 560 ESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMN 619
Query: 626 SLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAK 679
+ V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E +R +ILK + P++K
Sbjct: 620 AKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSK 675
Score = 390 (142.3 bits), Expect = 6.2e-33, P = 6.2e-33
Identities = 80/171 (46%), Positives = 116/171 (67%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
K ++ELPL +P+LF+ +GI PP+G LL+GPPGTGKTL+ARAVA++ + F + ++
Sbjct: 223 KEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMS 282
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
K GES +R+ F +QP I+F+DEIDAI +R E T+ + E +R + +LL MD
Sbjct: 283 KMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKR--EKTNGEVE-RRIVSQLLTLMD 339
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
G + +I ATNRP+++D AL R GR DR+I+I +P+ RLEIL+IH
Sbjct: 340 GVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIH 390
Score = 277 (102.6 bits), Expect = 2.7e-39, Sum P(2) = 2.7e-39
Identities = 63/182 (34%), Positives = 99/182 (54%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIG-GR 314
L + + + + ++ + GES +R++F+ AR PC++F DE+D+I R
Sbjct: 533 LAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKAR 592
Query: 315 RFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEI 374
G R + ++L +MDG ++ V +I ATNRPD +DPA+LRPGRLD+ I I
Sbjct: 593 GGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYI 652
Query: 375 PLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE 434
PLP+E +R S+ P++K ++D + K + F+GADL +C A AIR
Sbjct: 653 PLPDEASR-HQILKASLRKTPLSK--DLDLTFLAKNTVGFSGADLTEICQRACKLAIRES 709
Query: 435 RE 436
E
Sbjct: 710 IE 711
Score = 228 (85.3 bits), Expect = 1.3e-82, Sum P(2) = 1.3e-82
Identities = 45/102 (44%), Positives = 70/102 (68%)
Query: 144 TIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGIT 203
T++ Y E DP+ E DI Y +GG+ +Q+ +++E++ELPL +P+LF+ +GI
Sbjct: 186 TMIHY---EGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIK 242
Query: 204 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSK 245
PP+G LL+GPPGTGKTL+ARAVA++ +F +++ V SK
Sbjct: 243 PPRGILLFGPPGTGKTLIARAVANET-GSFFFLINGPEVMSK 283
Score = 189 (71.6 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 36/95 (37%), Positives = 59/95 (62%)
Query: 142 TLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVG 201
T+ R+ + P + + + T+S IGGL REL+E+++ P+ +PE + + G
Sbjct: 454 TMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFG 513
Query: 202 ITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
+ P +G L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 514 MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISI 548
Score = 61 (26.5 bits), Expect = 8.4e-22, Sum P(2) = 8.4e-22
Identities = 37/176 (21%), Positives = 81/176 (46%)
Query: 41 LTKQYDKSENDL-KALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQV-SLS 98
++K +SE++L KA + ++ + + +++ + + +K+ +++ + V Q+ +L
Sbjct: 281 MSKMSGESESNLRKAFEECEKNQPAILFI-DEIDAIAPKREKTNGEVER-RIVSQLLTLM 338
Query: 99 TSVS-KCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRY------LPR 151
V + V++ ATN P + G R+ + + + + L I+R L
Sbjct: 339 DGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLAD 398
Query: 152 EVD-PLVYNMSHEDPG-DITYSAIGGLSEQIRELREVIELP--LLNPELFQRVGIT 203
+VD + N H G D+ +QIRE E+I+L ++ E+ + +T
Sbjct: 399 DVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDDQIDAEVLNSLAVT 454
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 108/181 (59%), Positives = 140/181 (77%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S +V
Sbjct: 188 REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 247
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+NQ+D
Sbjct: 248 KYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLD 307
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
GFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP+ + R I KIHA ++ +
Sbjct: 308 GFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERD 367
Query: 683 I 683
I
Sbjct: 368 I 368
Score = 521 (188.5 bits), Expect = 1.4e-82, Sum P(2) = 1.4e-82
Identities = 97/193 (50%), Positives = 137/193 (70%)
Query: 258 RRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 317
R + + + S +V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF
Sbjct: 227 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFD 286
Query: 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLP 377
+G D E+QRT++EL+NQ+DGFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP
Sbjct: 287 DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 346
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY 437
+ + R H + IHA ++ +I +E + +L + GA++R+VCTEAG+FAIR+ R+
Sbjct: 347 DLEGR-THIF--KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKV 403
Query: 438 VTQEDFMKAVRKV 450
T++DF++AV KV
Sbjct: 404 ATEKDFLEAVNKV 416
Score = 326 (119.8 bits), Expect = 1.4e-82, Sum P(2) = 1.4e-82
Identities = 88/240 (36%), Positives = 125/240 (52%)
Query: 16 DYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQ--LK 73
D RK E E + +R + E L K Y +S + Q LL + E +K
Sbjct: 8 DQRKTKEEEKE-DKPIRSLDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIK 66
Query: 74 EL-TKQYDKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRR--------- 123
E T + DL A + Q V++C +I + P+Y++ ++
Sbjct: 67 ESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLS 126
Query: 124 -QLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRE 182
Q+ ++ G RV +D I LP ++DP V M E+ D+TYS +GG EQI +
Sbjct: 127 DQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEK 186
Query: 183 LREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
LREV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S V
Sbjct: 187 LREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELV 246
Score = 93 (37.8 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 428 LFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAV 487
+F I + V ++ + + ++ N S TEAG+FAIR+ R+ T++DF++AV
Sbjct: 354 IFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAV 413
Query: 488 RKV 490
KV
Sbjct: 414 NKV 416
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 109/181 (60%), Positives = 141/181 (77%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S +V
Sbjct: 188 REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 247
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+NQ+D
Sbjct: 248 KYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLD 307
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
GFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP+ + R ILKIHA ++ +
Sbjct: 308 GFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHILKIHARSMSVERD 367
Query: 683 I 683
I
Sbjct: 368 I 368
Score = 522 (188.8 bits), Expect = 1.7e-82, Sum P(2) = 1.7e-82
Identities = 97/193 (50%), Positives = 137/193 (70%)
Query: 258 RRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 317
R + + + S +V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF
Sbjct: 227 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFD 286
Query: 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLP 377
+G D E+QRT++EL+NQ+DGFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP
Sbjct: 287 DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 346
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY 437
+ + R H + IHA ++ +I +E + +L + GA++R+VCTEAG+FAIR+ R+
Sbjct: 347 DLEGR-THI--LKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 438 VTQEDFMKAVRKV 450
T++DF++AV KV
Sbjct: 404 ATEKDFLEAVNKV 416
Score = 324 (119.1 bits), Expect = 1.7e-82, Sum P(2) = 1.7e-82
Identities = 85/238 (35%), Positives = 125/238 (52%)
Query: 18 RKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQ--LKEL 75
++K E + + +R + E L K Y +S + Q LL + E +KE
Sbjct: 9 QRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKES 68
Query: 76 -TKQYDKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRR----------Q 124
T + DL A + Q V++C +I + P+Y++ ++ Q
Sbjct: 69 DTGLAPPALWDLAADKQTLQSEQPLQVARCTKIITADSEDPKYIINVKQFAKFVVDLSDQ 128
Query: 125 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 184
+ ++ G RV +D I LP ++DP V M E+ D+TYS +GG EQI +LR
Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 188
Query: 185 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
EV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S V
Sbjct: 189 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELV 246
Score = 87 (35.7 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 16/27 (59%), Positives = 23/27 (85%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKV 490
TEAG+FAIR+ R+ T++DF++AV KV
Sbjct: 390 TEAGMFAIRARRKIATEKDFLEAVNKV 416
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 108/181 (59%), Positives = 140/181 (77%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S +V
Sbjct: 188 REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 247
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+NQ+D
Sbjct: 248 KYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLD 307
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
GFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP+ + R I KIHA ++ +
Sbjct: 308 GFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERD 367
Query: 683 I 683
I
Sbjct: 368 I 368
Score = 521 (188.5 bits), Expect = 1.8e-82, Sum P(2) = 1.8e-82
Identities = 97/193 (50%), Positives = 137/193 (70%)
Query: 258 RRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 317
R + + + S +V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF
Sbjct: 227 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFD 286
Query: 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLP 377
+G D E+QRT++EL+NQ+DGFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP
Sbjct: 287 DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 346
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY 437
+ + R H + IHA ++ +I +E + +L + GA++R+VCTEAG+FAIR+ R+
Sbjct: 347 DLEGR-THIF--KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 438 VTQEDFMKAVRKV 450
T++DF++AV KV
Sbjct: 404 ATEKDFLEAVNKV 416
Score = 325 (119.5 bits), Expect = 1.8e-82, Sum P(2) = 1.8e-82
Identities = 85/238 (35%), Positives = 126/238 (52%)
Query: 18 RKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQ--LKEL 75
++K+ E + + +R + E L K Y +S + Q LL + E +KE
Sbjct: 9 QRKVKEEEKEDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKES 68
Query: 76 -TKQYDKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRR----------Q 124
T + DL A + Q V++C +I + P+Y++ ++ Q
Sbjct: 69 DTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQ 128
Query: 125 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 184
+ ++ G RV +D I LP ++DP V M E+ D+TYS +GG EQI +LR
Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 188
Query: 185 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
EV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S V
Sbjct: 189 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELV 246
Score = 93 (37.8 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 428 LFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAV 487
+F I + V ++ + + ++ N S TEAG+FAIR+ R+ T++DF++AV
Sbjct: 354 IFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAV 413
Query: 488 RKV 490
KV
Sbjct: 414 NKV 416
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 108/181 (59%), Positives = 140/181 (77%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S +V
Sbjct: 188 REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 247
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+NQ+D
Sbjct: 248 KYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLD 307
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
GFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP+ + R I KIHA ++ +
Sbjct: 308 GFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERD 367
Query: 683 I 683
I
Sbjct: 368 I 368
Score = 521 (188.5 bits), Expect = 3.7e-82, Sum P(2) = 3.7e-82
Identities = 97/193 (50%), Positives = 137/193 (70%)
Query: 258 RRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 317
R + + + S +V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF
Sbjct: 227 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFD 286
Query: 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLP 377
+G D E+QRT++EL+NQ+DGFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP
Sbjct: 287 DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 346
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY 437
+ + R H + IHA ++ +I +E + +L + GA++R+VCTEAG+FAIR+ R+
Sbjct: 347 DLEGR-THIF--KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 438 VTQEDFMKAVRKV 450
T++DF++AV KV
Sbjct: 404 ATEKDFLEAVNKV 416
Score = 322 (118.4 bits), Expect = 3.7e-82, Sum P(2) = 3.7e-82
Identities = 85/238 (35%), Positives = 125/238 (52%)
Query: 18 RKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQ--LKEL 75
++K E + + +R + E L K Y +S + Q LL + E +KE
Sbjct: 9 QRKTKEEEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKES 68
Query: 76 -TKQYDKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRR----------Q 124
T + DL A + Q V++C +I + P+Y++ ++ Q
Sbjct: 69 DTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQ 128
Query: 125 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 184
+ ++ G RV +D I LP ++DP V M E+ D+TYS +GG EQI +LR
Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 188
Query: 185 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
EV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S V
Sbjct: 189 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELV 246
Score = 93 (37.8 bits), Expect = 3.2e-35, Sum P(2) = 3.2e-35
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 428 LFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAV 487
+F I + V ++ + + ++ N S TEAG+FAIR+ R+ T++DF++AV
Sbjct: 354 IFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAV 413
Query: 488 RKV 490
KV
Sbjct: 414 NKV 416
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 108/181 (59%), Positives = 140/181 (77%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S +V
Sbjct: 188 REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 247
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+NQ+D
Sbjct: 248 KYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLD 307
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
GFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP+ + R I KIHA ++ +
Sbjct: 308 GFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERD 367
Query: 683 I 683
I
Sbjct: 368 I 368
Score = 521 (188.5 bits), Expect = 4.7e-82, Sum P(2) = 4.7e-82
Identities = 97/193 (50%), Positives = 137/193 (70%)
Query: 258 RRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 317
R + + + S +V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF
Sbjct: 227 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFD 286
Query: 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLP 377
+G D E+QRT++EL+NQ+DGFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP
Sbjct: 287 DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 346
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY 437
+ + R H + IHA ++ +I +E + +L + GA++R+VCTEAG+FAIR+ R+
Sbjct: 347 DLEGR-THIF--KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 438 VTQEDFMKAVRKV 450
T++DF++AV KV
Sbjct: 404 ATEKDFLEAVNKV 416
Score = 321 (118.1 bits), Expect = 4.7e-82, Sum P(2) = 4.7e-82
Identities = 85/238 (35%), Positives = 125/238 (52%)
Query: 18 RKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQ--LKEL 75
++K E + + +R + E L K Y +S + Q LL + E +KE
Sbjct: 9 QRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKES 68
Query: 76 -TKQYDKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRR----------Q 124
T + DL A + Q V++C +I + P+Y++ ++ Q
Sbjct: 69 DTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQ 128
Query: 125 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 184
+ ++ G RV +D I LP ++DP V M E+ D+TYS +GG EQI +LR
Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 188
Query: 185 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
EV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S V
Sbjct: 189 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELV 246
Score = 93 (37.8 bits), Expect = 4.0e-35, Sum P(2) = 4.0e-35
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 428 LFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAV 487
+F I + V ++ + + ++ N S TEAG+FAIR+ R+ T++DF++AV
Sbjct: 354 IFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAV 413
Query: 488 RKV 490
KV
Sbjct: 414 NKV 416
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 108/181 (59%), Positives = 140/181 (77%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S +V
Sbjct: 188 REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 247
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+NQ+D
Sbjct: 248 KYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLD 307
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
GFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP+ + R I KIHA ++ +
Sbjct: 308 GFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERD 367
Query: 683 I 683
I
Sbjct: 368 I 368
Score = 521 (188.5 bits), Expect = 4.7e-82, Sum P(2) = 4.7e-82
Identities = 97/193 (50%), Positives = 137/193 (70%)
Query: 258 RRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 317
R + + + S +V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF
Sbjct: 227 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFD 286
Query: 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLP 377
+G D E+QRT++EL+NQ+DGFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP
Sbjct: 287 DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 346
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY 437
+ + R H + IHA ++ +I +E + +L + GA++R+VCTEAG+FAIR+ R+
Sbjct: 347 DLEGR-THIF--KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 438 VTQEDFMKAVRKV 450
T++DF++AV KV
Sbjct: 404 ATEKDFLEAVNKV 416
Score = 321 (118.1 bits), Expect = 4.7e-82, Sum P(2) = 4.7e-82
Identities = 85/238 (35%), Positives = 125/238 (52%)
Query: 18 RKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQ--LKEL 75
++K E + + +R + E L K Y +S + Q LL + E +KE
Sbjct: 9 QRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKES 68
Query: 76 -TKQYDKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRR----------Q 124
T + DL A + Q V++C +I + P+Y++ ++ Q
Sbjct: 69 DTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQ 128
Query: 125 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 184
+ ++ G RV +D I LP ++DP V M E+ D+TYS +GG EQI +LR
Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 188
Query: 185 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
EV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S V
Sbjct: 189 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELV 246
Score = 93 (37.8 bits), Expect = 4.0e-35, Sum P(2) = 4.0e-35
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 428 LFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAV 487
+F I + V ++ + + ++ N S TEAG+FAIR+ R+ T++DF++AV
Sbjct: 354 IFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAV 413
Query: 488 RKV 490
KV
Sbjct: 414 NKV 416
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 108/181 (59%), Positives = 140/181 (77%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S +V
Sbjct: 188 REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 247
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+NQ+D
Sbjct: 248 KYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLD 307
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
GFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP+ + R I KIHA ++ +
Sbjct: 308 GFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERD 367
Query: 683 I 683
I
Sbjct: 368 I 368
Score = 521 (188.5 bits), Expect = 4.7e-82, Sum P(2) = 4.7e-82
Identities = 97/193 (50%), Positives = 137/193 (70%)
Query: 258 RRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 317
R + + + S +V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF
Sbjct: 227 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFD 286
Query: 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLP 377
+G D E+QRT++EL+NQ+DGFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP
Sbjct: 287 DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 346
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY 437
+ + R H + IHA ++ +I +E + +L + GA++R+VCTEAG+FAIR+ R+
Sbjct: 347 DLEGR-THIF--KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 438 VTQEDFMKAVRKV 450
T++DF++AV KV
Sbjct: 404 ATEKDFLEAVNKV 416
Score = 321 (118.1 bits), Expect = 4.7e-82, Sum P(2) = 4.7e-82
Identities = 85/238 (35%), Positives = 125/238 (52%)
Query: 18 RKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQ--LKEL 75
++K E + + +R + E L K Y +S + Q LL + E +KE
Sbjct: 9 QRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKES 68
Query: 76 -TKQYDKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRR----------Q 124
T + DL A + Q V++C +I + P+Y++ ++ Q
Sbjct: 69 DTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQ 128
Query: 125 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 184
+ ++ G RV +D I LP ++DP V M E+ D+TYS +GG EQI +LR
Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 188
Query: 185 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
EV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S V
Sbjct: 189 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELV 246
Score = 93 (37.8 bits), Expect = 4.0e-35, Sum P(2) = 4.0e-35
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 428 LFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAV 487
+F I + V ++ + + ++ N S TEAG+FAIR+ R+ T++DF++AV
Sbjct: 354 IFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAV 413
Query: 488 RKV 490
KV
Sbjct: 414 NKV 416
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 108/181 (59%), Positives = 140/181 (77%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S +V
Sbjct: 230 REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 289
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+NQ+D
Sbjct: 290 KYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLD 349
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
GFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP+ + R I KIHA ++ +
Sbjct: 350 GFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERD 409
Query: 683 I 683
I
Sbjct: 410 I 410
Score = 521 (188.5 bits), Expect = 4.7e-82, Sum P(2) = 4.7e-82
Identities = 97/193 (50%), Positives = 137/193 (70%)
Query: 258 RRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 317
R + + + S +V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF
Sbjct: 269 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFD 328
Query: 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLP 377
+G D E+QRT++EL+NQ+DGFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP
Sbjct: 329 DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 388
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY 437
+ + R H + IHA ++ +I +E + +L + GA++R+VCTEAG+FAIR+ R+
Sbjct: 389 DLEGR-THIF--KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 445
Query: 438 VTQEDFMKAVRKV 450
T++DF++AV KV
Sbjct: 446 ATEKDFLEAVNKV 458
Score = 321 (118.1 bits), Expect = 4.7e-82, Sum P(2) = 4.7e-82
Identities = 85/238 (35%), Positives = 125/238 (52%)
Query: 18 RKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQ--LKEL 75
++K E + + +R + E L K Y +S + Q LL + E +KE
Sbjct: 51 QRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKES 110
Query: 76 -TKQYDKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRR----------Q 124
T + DL A + Q V++C +I + P+Y++ ++ Q
Sbjct: 111 DTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQ 170
Query: 125 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 184
+ ++ G RV +D I LP ++DP V M E+ D+TYS +GG EQI +LR
Sbjct: 171 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 230
Query: 185 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
EV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S V
Sbjct: 231 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELV 288
Score = 93 (37.8 bits), Expect = 5.7e-32, Sum P(2) = 5.7e-32
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 428 LFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAV 487
+F I + V ++ + + ++ N S TEAG+FAIR+ R+ T++DF++AV
Sbjct: 396 IFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAV 455
Query: 488 RKV 490
KV
Sbjct: 456 NKV 458
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 108/181 (59%), Positives = 140/181 (77%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S +V
Sbjct: 188 REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 247
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+NQ+D
Sbjct: 248 KYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLD 307
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
GFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP+ + R I KIHA ++ +
Sbjct: 308 GFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERD 367
Query: 683 I 683
I
Sbjct: 368 I 368
Score = 521 (188.5 bits), Expect = 4.7e-82, Sum P(2) = 4.7e-82
Identities = 97/193 (50%), Positives = 137/193 (70%)
Query: 258 RRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 317
R + + + S +V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF
Sbjct: 227 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFD 286
Query: 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLP 377
+G D E+QRT++EL+NQ+DGFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP
Sbjct: 287 DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 346
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY 437
+ + R H + IHA ++ +I +E + +L + GA++R+VCTEAG+FAIR+ R+
Sbjct: 347 DLEGR-THIF--KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403
Query: 438 VTQEDFMKAVRKV 450
T++DF++AV KV
Sbjct: 404 ATEKDFLEAVNKV 416
Score = 321 (118.1 bits), Expect = 4.7e-82, Sum P(2) = 4.7e-82
Identities = 85/238 (35%), Positives = 125/238 (52%)
Query: 18 RKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQ--LKEL 75
++K E + + +R + E L K Y +S + Q LL + E +KE
Sbjct: 9 QRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKES 68
Query: 76 -TKQYDKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRR----------Q 124
T + DL A + Q V++C +I + P+Y++ ++ Q
Sbjct: 69 DTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQ 128
Query: 125 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 184
+ ++ G RV +D I LP ++DP V M E+ D+TYS +GG EQI +LR
Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 188
Query: 185 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
EV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S V
Sbjct: 189 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELV 246
Score = 93 (37.8 bits), Expect = 4.0e-35, Sum P(2) = 4.0e-35
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 428 LFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAV 487
+F I + V ++ + + ++ N S TEAG+FAIR+ R+ T++DF++AV
Sbjct: 354 IFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAV 413
Query: 488 RKV 490
KV
Sbjct: 414 NKV 416
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 108/181 (59%), Positives = 140/181 (77%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S +V
Sbjct: 187 REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 246
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+NQ+D
Sbjct: 247 KYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLD 306
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
GFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP+ + R I KIHA ++ +
Sbjct: 307 GFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERD 366
Query: 683 I 683
I
Sbjct: 367 I 367
Score = 521 (188.5 bits), Expect = 6.0e-82, Sum P(2) = 6.0e-82
Identities = 97/193 (50%), Positives = 137/193 (70%)
Query: 258 RRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 317
R + + + S +V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF
Sbjct: 226 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFD 285
Query: 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLP 377
+G D E+QRT++EL+NQ+DGFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP
Sbjct: 286 DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 345
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY 437
+ + R H + IHA ++ +I +E + +L + GA++R+VCTEAG+FAIR+ R+
Sbjct: 346 DLEGR-THIF--KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 402
Query: 438 VTQEDFMKAVRKV 450
T++DF++AV KV
Sbjct: 403 ATEKDFLEAVNKV 415
Score = 320 (117.7 bits), Expect = 6.0e-82, Sum P(2) = 6.0e-82
Identities = 85/234 (36%), Positives = 122/234 (52%)
Query: 22 TEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQ--LKEL-TKQ 78
T+ E E + + E L K Y +S + Q LL + E +KE T
Sbjct: 12 TKEEEKEDKHSSLDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGL 71
Query: 79 YDKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRR----------QLDKA 128
+ DL A + Q V++C +I + P+Y++ ++ Q+
Sbjct: 72 APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT 131
Query: 129 KLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIE 188
++ G RV +D I LP ++DP V M E+ D+TYS +GG EQI +LREV+E
Sbjct: 132 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVE 191
Query: 189 LPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S V
Sbjct: 192 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELV 245
Score = 93 (37.8 bits), Expect = 5.2e-35, Sum P(2) = 5.2e-35
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 428 LFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAV 487
+F I + V ++ + + ++ N S TEAG+FAIR+ R+ T++DF++AV
Sbjct: 353 IFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAV 412
Query: 488 RKV 490
KV
Sbjct: 413 NKV 415
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 108/181 (59%), Positives = 140/181 (77%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S +V
Sbjct: 179 REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 238
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+NQ+D
Sbjct: 239 KYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLD 298
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
GFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP+ + R I KIHA ++ +
Sbjct: 299 GFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERD 358
Query: 683 I 683
I
Sbjct: 359 I 359
Score = 521 (188.5 bits), Expect = 9.8e-82, Sum P(2) = 9.8e-82
Identities = 97/193 (50%), Positives = 137/193 (70%)
Query: 258 RRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 317
R + + + S +V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF
Sbjct: 218 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFD 277
Query: 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLP 377
+G D E+QRT++EL+NQ+DGFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP
Sbjct: 278 DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 337
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY 437
+ + R H + IHA ++ +I +E + +L + GA++R+VCTEAG+FAIR+ R+
Sbjct: 338 DLEGR-THIF--KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 394
Query: 438 VTQEDFMKAVRKV 450
T++DF++AV KV
Sbjct: 395 ATEKDFLEAVNKV 407
Score = 318 (117.0 bits), Expect = 9.8e-82, Sum P(2) = 9.8e-82
Identities = 70/168 (41%), Positives = 99/168 (58%)
Query: 85 DLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRR----------QLDKAKLKSGT 134
DL A + Q V++C +I + P+Y++ ++ Q+ ++ G
Sbjct: 70 DLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGM 129
Query: 135 RVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNP 194
RV +D I LP ++DP V M E+ D+TYS +GG EQI +LREV+E PLL+P
Sbjct: 130 RVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHP 189
Query: 195 ELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
E F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S V
Sbjct: 190 ERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELV 237
Score = 93 (37.8 bits), Expect = 8.6e-35, Sum P(2) = 8.6e-35
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 428 LFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAV 487
+F I + V ++ + + ++ N S TEAG+FAIR+ R+ T++DF++AV
Sbjct: 345 IFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAV 404
Query: 488 RKV 490
KV
Sbjct: 405 NKV 407
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 628 (226.1 bits), Expect = 1.2e-81, Sum P(2) = 1.2e-81
Identities = 157/426 (36%), Positives = 240/426 (56%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F ++ K GE+ +R F A + P IIF+DEID+I +R E T+ + E +
Sbjct: 269 FFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKR--EKTNGEVE-R 325
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG S GQV +I ATNR +++DPAL R GR DR+I+I +P++ R
Sbjct: 326 RVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEI-- 383
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ IH + ++ E + + F GADL +CTEA L IR + + + ED +
Sbjct: 384 -LRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLEDEI-ID 441
Query: 448 RKVSDNKKL--DHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKPV 505
++V ++ + DH N G S RE V + +K + +++S L + +
Sbjct: 442 KEVLESMCVTQDHFNM---ALGTCNPSSLRETVVEVPNVKW-DDIGGLDEVKSTL--REM 495
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
I P+ +P+ F++ G++P +G L YGPPG GKTLLA+AVAS+ ANF+ + ++ +
Sbjct: 496 ILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIKGPELLTMWF 555
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 625
GES +RE+F+ AR PC++F DE+D+IG +R S R + +LL ++DG
Sbjct: 556 GESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVG 615
Query: 626 SLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAKHGEI 683
+ I ATNRP+ LD ALLRPGRLD+ I IPLP+ AR+ IL + P+A++ I
Sbjct: 616 PKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLPDLGARISILTAILRKCPVAENVPI 675
Query: 684 GDAATK 689
A K
Sbjct: 676 DFLAQK 681
Score = 395 (144.1 bits), Expect = 1.8e-33, P = 1.8e-33
Identities = 81/171 (47%), Positives = 116/171 (67%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ +IELPL +P LF+ +G+ PP+G LLYGPPG+GKT +ARAVA++ A F + ++
Sbjct: 220 REMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVMS 279
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
K GE+ +R F A + P IIF+DEID+I +R E T+ + E +R + +LL MD
Sbjct: 280 KMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKR--EKTNGEVE-RRVVSQLLTLMD 336
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
G S GQV +I ATNR +++DPAL R GR DR+I+I +P++ R EIL+IH
Sbjct: 337 GIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEILRIH 387
Score = 275 (101.9 bits), Expect = 3.8e-37, Sum P(2) = 3.8e-37
Identities = 69/185 (37%), Positives = 104/185 (56%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
++ + GES +RE+F+ AR PC++F DE+D+IG +R S R + +LL
Sbjct: 550 LLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLT 609
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
++DG + I ATNRP+ LD ALLRPGRLD+ I IPLP+ AR++ I + P
Sbjct: 610 EIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLPDLGARISILTAI-LRKCP 668
Query: 396 IAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 455
+A++ ID+ A + + F+GADL +C A AIR + + E+ K + NKK
Sbjct: 669 VAENVPIDFLA--QKTAGFSGADLAELCQRAARAAIR---DAIDAEEMNKKSKLELSNKK 723
Query: 456 LDHCN 460
+ N
Sbjct: 724 ENEQN 728
Score = 210 (79.0 bits), Expect = 1.2e-81, Sum P(2) = 1.2e-81
Identities = 46/102 (45%), Positives = 68/102 (66%)
Query: 144 TIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGIT 203
T++ Y E DP+ + E +I Y IGG +Q+ ++RE+IELPL +P LF+ +G+
Sbjct: 184 TVIYY---EGDPIKRD-DEEKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVK 239
Query: 204 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSK 245
PP+G LLYGPPG+GKT +ARAVA++ A F +++ V SK
Sbjct: 240 PPRGVLLYGPPGSGKTCIARAVANETGAFFF-LINGPEVMSK 280
Score = 182 (69.1 bits), Expect = 3.3e-34, Sum P(2) = 3.3e-34
Identities = 34/70 (48%), Positives = 50/70 (71%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++ + IGGL E LRE+I P+ +P+ F++ G++P +G L YGPPG GKTLLA+AVA
Sbjct: 476 NVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVA 535
Query: 227 SQLDANFLKV 236
S+ ANF+ +
Sbjct: 536 SECSANFVSI 545
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 628 (226.1 bits), Expect = 1.2e-81, Sum P(2) = 1.2e-81
Identities = 157/426 (36%), Positives = 240/426 (56%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F ++ K GE+ +R F A + P IIF+DEID+I +R E T+ + E +
Sbjct: 269 FFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKR--EKTNGEVE-R 325
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG S GQV +I ATNR +++DPAL R GR DR+I+I +P++ R
Sbjct: 326 RVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEI-- 383
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ IH + ++ E + + F GADL +CTEA L IR + + + ED +
Sbjct: 384 -LRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLEDEI-ID 441
Query: 448 RKVSDNKKL--DHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKPV 505
++V ++ + DH N G S RE V + +K + +++S L + +
Sbjct: 442 KEVLESMCVTQDHFNM---ALGTCNPSSLRETVVEVPNVKW-DDIGGLDEVKSTL--REM 495
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
I P+ +P+ F++ G++P +G L YGPPG GKTLLA+AVAS+ ANF+ + ++ +
Sbjct: 496 ILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIKGPELLTMWF 555
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 625
GES +RE+F+ AR PC++F DE+D+IG +R S R + +LL ++DG
Sbjct: 556 GESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVG 615
Query: 626 SLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAKHGEI 683
+ I ATNRP+ LD ALLRPGRLD+ I IPLP+ AR+ IL + P+A++ I
Sbjct: 616 PKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLPDLGARISILTAILRKCPVAENVPI 675
Query: 684 GDAATK 689
A K
Sbjct: 676 DFLAQK 681
Score = 395 (144.1 bits), Expect = 1.8e-33, P = 1.8e-33
Identities = 81/171 (47%), Positives = 116/171 (67%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ +IELPL +P LF+ +G+ PP+G LLYGPPG+GKT +ARAVA++ A F + ++
Sbjct: 220 REMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVMS 279
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
K GE+ +R F A + P IIF+DEID+I +R E T+ + E +R + +LL MD
Sbjct: 280 KMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKR--EKTNGEVE-RRVVSQLLTLMD 336
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
G S GQV +I ATNR +++DPAL R GR DR+I+I +P++ R EIL+IH
Sbjct: 337 GIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEILRIH 387
Score = 275 (101.9 bits), Expect = 3.8e-37, Sum P(2) = 3.8e-37
Identities = 69/185 (37%), Positives = 104/185 (56%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
++ + GES +RE+F+ AR PC++F DE+D+IG +R S R + +LL
Sbjct: 550 LLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLT 609
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
++DG + I ATNRP+ LD ALLRPGRLD+ I IPLP+ AR++ I + P
Sbjct: 610 EIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLPDLGARISILTAI-LRKCP 668
Query: 396 IAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 455
+A++ ID+ A + + F+GADL +C A AIR + + E+ K + NKK
Sbjct: 669 VAENVPIDFLA--QKTAGFSGADLAELCQRAARAAIR---DAIDAEEMNKKSKLELSNKK 723
Query: 456 LDHCN 460
+ N
Sbjct: 724 ENEQN 728
Score = 210 (79.0 bits), Expect = 1.2e-81, Sum P(2) = 1.2e-81
Identities = 46/102 (45%), Positives = 68/102 (66%)
Query: 144 TIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGIT 203
T++ Y E DP+ + E +I Y IGG +Q+ ++RE+IELPL +P LF+ +G+
Sbjct: 184 TVIYY---EGDPIKRD-DEEKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVK 239
Query: 204 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSK 245
PP+G LLYGPPG+GKT +ARAVA++ A F +++ V SK
Sbjct: 240 PPRGVLLYGPPGSGKTCIARAVANETGAFFF-LINGPEVMSK 280
Score = 182 (69.1 bits), Expect = 3.3e-34, Sum P(2) = 3.3e-34
Identities = 34/70 (48%), Positives = 50/70 (71%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++ + IGGL E LRE+I P+ +P+ F++ G++P +G L YGPPG GKTLLA+AVA
Sbjct: 476 NVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVA 535
Query: 227 SQLDANFLKV 236
S+ ANF+ +
Sbjct: 536 SECSANFVSI 545
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 107/181 (59%), Positives = 140/181 (77%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+E PLL+PE + +GI PPKG LLYGPPGTGKTL ARAVA++ DA F++V+ S +V
Sbjct: 190 REVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 249
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE AR++RE+F AR + C+IF DEIDA+GG RF +G D E+QRT++EL+NQ+D
Sbjct: 250 KYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLD 309
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
GFD G +K++MATNRPDTLDPAL+RPGRLDRK+E LP+ R ILKIHA ++ +
Sbjct: 310 GFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERD 369
Query: 683 I 683
I
Sbjct: 370 I 370
Score = 520 (188.1 bits), Expect = 1.4e-81, Sum P(2) = 1.4e-81
Identities = 95/193 (49%), Positives = 137/193 (70%)
Query: 258 RRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 317
R + + + S +V KY+GE AR++RE+F AR + C+IF DEIDA+GG RF
Sbjct: 229 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFD 288
Query: 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLP 377
+G D E+QRT++EL+NQ+DGFD G +K++MATNRPDTLDPAL+RPGRLDRK+E LP
Sbjct: 289 DGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALP 348
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY 437
+ R AH + IHA ++ +I Y+ + +L + GA++R+VCTEAG+FAIR+ R+
Sbjct: 349 DLAGR-AHI--LKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKV 405
Query: 438 VTQEDFMKAVRKV 450
T++DF++A+ KV
Sbjct: 406 ATEKDFLEAINKV 418
Score = 318 (117.0 bits), Expect = 1.4e-81, Sum P(2) = 1.4e-81
Identities = 70/168 (41%), Positives = 100/168 (59%)
Query: 85 DLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRR----QLDKAK------LKSGT 134
D+ A + Q V++C +I + PRY++ ++ +D A ++ G
Sbjct: 81 DIAADKQAMQQEQPLQVARCTKIITSDKHDPRYLINVKQFAKFVVDLADSVAPTDIEEGM 140
Query: 135 RVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNP 194
RV +D I LP ++DP V M E+ D+TYS +GG +QI +LREV+E PLL+P
Sbjct: 141 RVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHP 200
Query: 195 ELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
E + +GI PPKG LLYGPPGTGKTL ARAVA++ DA F++V+ S V
Sbjct: 201 ERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELV 248
Score = 90 (36.7 bits), Expect = 1.6e-33, Sum P(2) = 1.6e-33
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 419 LRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYV 478
L ++ A + I +++ V ++ + ++ N S TEAG+FAIR+ R+
Sbjct: 347 LPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVA 406
Query: 479 TQEDFMKAVRKV 490
T++DF++A+ KV
Sbjct: 407 TEKDFLEAINKV 418
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 107/181 (59%), Positives = 140/181 (77%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+E PLL+PE + +GI PPKG LLYGPPGTGKTL ARAVA++ DA F++V+ S +V
Sbjct: 190 REVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 249
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE AR++RE+F AR + C+IF DEIDA+GG RF +G D E+QRT++EL+NQ+D
Sbjct: 250 KYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLD 309
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
GFD G +K++MATNRPDTLDPAL+RPGRLDRK+E LP+ R ILKIHA ++ +
Sbjct: 310 GFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERD 369
Query: 683 I 683
I
Sbjct: 370 I 370
Score = 520 (188.1 bits), Expect = 1.4e-81, Sum P(2) = 1.4e-81
Identities = 95/193 (49%), Positives = 137/193 (70%)
Query: 258 RRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 317
R + + + S +V KY+GE AR++RE+F AR + C+IF DEIDA+GG RF
Sbjct: 229 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFD 288
Query: 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLP 377
+G D E+QRT++EL+NQ+DGFD G +K++MATNRPDTLDPAL+RPGRLDRK+E LP
Sbjct: 289 DGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALP 348
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY 437
+ R AH + IHA ++ +I Y+ + +L + GA++R+VCTEAG+FAIR+ R+
Sbjct: 349 DLAGR-AHI--LKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKV 405
Query: 438 VTQEDFMKAVRKV 450
T++DF++A+ KV
Sbjct: 406 ATEKDFLEAINKV 418
Score = 318 (117.0 bits), Expect = 1.4e-81, Sum P(2) = 1.4e-81
Identities = 70/168 (41%), Positives = 100/168 (59%)
Query: 85 DLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRR----QLDKAK------LKSGT 134
D+ A + Q V++C +I + PRY++ ++ +D A ++ G
Sbjct: 81 DIAADKQAMQQEQPLQVARCTKIITSDKHDPRYLINVKQFAKFVVDLADSVAPTDIEEGM 140
Query: 135 RVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNP 194
RV +D I LP ++DP V M E+ D+TYS +GG +QI +LREV+E PLL+P
Sbjct: 141 RVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHP 200
Query: 195 ELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
E + +GI PPKG LLYGPPGTGKTL ARAVA++ DA F++V+ S V
Sbjct: 201 ERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELV 248
Score = 90 (36.7 bits), Expect = 1.6e-33, Sum P(2) = 1.6e-33
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 419 LRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYV 478
L ++ A + I +++ V ++ + ++ N S TEAG+FAIR+ R+
Sbjct: 347 LPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVA 406
Query: 479 TQEDFMKAVRKV 490
T++DF++A+ KV
Sbjct: 407 TEKDFLEAINKV 418
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 614 (221.2 bits), Expect = 1.9e-81, Sum P(2) = 1.9e-81
Identities = 146/406 (35%), Positives = 227/406 (55%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F I+ K GES +R+ F + P I+F+DEIDAI +R E + E +
Sbjct: 271 FFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKR--EKAHGEVE-K 327
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG + V +I ATNRP+++D AL R GR DR+I+I +P+ RL
Sbjct: 328 RIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEI-- 385
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ IH + ++D E V F GADL ++C+EA + IR + E + ED
Sbjct: 386 -LRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLED----- 439
Query: 448 RKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKV-SDNKKLES-KLDYKPV 505
D + L+ + E FA+ +E ++ SD L++ K + + +
Sbjct: 440 -DTIDAEVLNSL-AVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQEL 497
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
++ P+ +PE + + G+ P +G L YGPPG GKTLLA+A+A++ ANF+ + ++ +
Sbjct: 498 VQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWF 557
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 625
GES +R++F+ AR PC++F DE+D+I R A R + ++L +MDG +
Sbjct: 558 GESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMN 617
Query: 626 SLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
+ V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E +RL+I K
Sbjct: 618 AKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFK 663
Score = 389 (142.0 bits), Expect = 8.0e-33, P = 8.0e-33
Identities = 90/215 (41%), Positives = 134/215 (62%)
Query: 471 IRSEREYVTQEDFMKAVRKVS--DNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGC 527
I E + + +E+ +A+ +V D + +L K ++ELPL +P+LF+ +G+ PP+G
Sbjct: 187 IHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGI 246
Query: 528 LLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCII 587
LL+GPPGTGKTL+ARAVA++ A F + I+ K GES +R+ F + P I+
Sbjct: 247 LLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAIL 306
Query: 588 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALL 647
F+DEIDAI +R E + E +R + +LL MDG + V +I ATNRP+++D AL
Sbjct: 307 FIDEIDAIAPKR--EKAHGEVE-KRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALR 363
Query: 648 RPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
R GR DR+I+I +P+ RLEIL+IH + K GE
Sbjct: 364 RFGRFDREIDIGIPDAVGRLEILRIHTKNM-KLGE 397
Score = 292 (107.8 bits), Expect = 2.5e-40, Sum P(2) = 2.5e-40
Identities = 67/188 (35%), Positives = 105/188 (55%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + + + ++ + GES +R++F+ AR PC++F DE+D+I R
Sbjct: 532 LAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKAR 591
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
A R + ++L +MDG ++ V +I ATNRPD +DPA+LRPGRLD+ I IP
Sbjct: 592 GGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIP 651
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRS-- 433
LP+E +RL + S+ P++ ++D + K + F+GADL +C A AIR
Sbjct: 652 LPDEASRL-QIFKASLRKTPLS--ADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESI 708
Query: 434 EREYVTQE 441
ERE + QE
Sbjct: 709 ERE-IRQE 715
Score = 222 (83.2 bits), Expect = 1.9e-81, Sum P(2) = 1.9e-81
Identities = 40/93 (43%), Positives = 65/93 (69%)
Query: 144 TIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGIT 203
T++ Y E DP+ E ++ Y +GG+ +Q+ +++E++ELPL +P+LF+ +G+
Sbjct: 185 TVIHY---EGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVK 241
Query: 204 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
PP+G LL+GPPGTGKTL+ARAVA++ A F +
Sbjct: 242 PPRGILLFGPPGTGKTLIARAVANETGAFFFLI 274
Score = 188 (71.2 bits), Expect = 9.3e-37, Sum P(2) = 9.3e-37
Identities = 35/74 (47%), Positives = 53/74 (71%)
Query: 163 EDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLA 222
E P + T+S IGGL REL+E+++ P+ +PE + + G+ P +G L YGPPG GKTLLA
Sbjct: 475 ETP-NTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLA 533
Query: 223 RAVASQLDANFLKV 236
+A+A++ ANF+ +
Sbjct: 534 KAIANECQANFISI 547
Score = 63 (27.2 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 37/176 (21%), Positives = 81/176 (46%)
Query: 41 LTKQYDKSENDL-KALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQV-SLS 98
++K +SE++L KA ++ + + +++ + + +K+ +++ + V Q+ +L
Sbjct: 280 MSKMSGESESNLRKAFAECEKNSPAILFI-DEIDAIAPKREKAHGEVEK-RIVSQLLTLM 337
Query: 99 TSV-SKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRY------LPR 151
+ ++ V++ ATN P + G R+ + + + + L I+R L
Sbjct: 338 DGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGE 397
Query: 152 EVD-PLVYNMSHEDPG-DITYSAIGGLSEQIRELREVIELP--LLNPELFQRVGIT 203
+VD V N H G D+ +QIRE E+I+L ++ E+ + +T
Sbjct: 398 DVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVT 453
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 614 (221.2 bits), Expect = 1.9e-81, Sum P(2) = 1.9e-81
Identities = 146/406 (35%), Positives = 227/406 (55%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F I+ K GES +R+ F + P I+F+DEIDAI +R E + E +
Sbjct: 271 FFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKR--EKAHGEVE-K 327
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG + V +I ATNRP+++D AL R GR DR+I+I +P+ RL
Sbjct: 328 RIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEI-- 385
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ IH + ++D E V F GADL ++C+EA + IR + E + ED
Sbjct: 386 -LRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLED----- 439
Query: 448 RKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKV-SDNKKLES-KLDYKPV 505
D + L+ + E FA+ +E ++ SD L++ K + + +
Sbjct: 440 -DTIDAEVLNSL-AVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQEL 497
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
++ P+ +PE + + G+ P +G L YGPPG GKTLLA+A+A++ ANF+ + ++ +
Sbjct: 498 VQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWF 557
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 625
GES +R++F+ AR PC++F DE+D+I R A R + ++L +MDG +
Sbjct: 558 GESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMN 617
Query: 626 SLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
+ V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E +RL+I K
Sbjct: 618 AKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFK 663
Score = 389 (142.0 bits), Expect = 8.0e-33, P = 8.0e-33
Identities = 90/215 (41%), Positives = 134/215 (62%)
Query: 471 IRSEREYVTQEDFMKAVRKVS--DNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGC 527
I E + + +E+ +A+ +V D + +L K ++ELPL +P+LF+ +G+ PP+G
Sbjct: 187 IHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGI 246
Query: 528 LLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCII 587
LL+GPPGTGKTL+ARAVA++ A F + I+ K GES +R+ F + P I+
Sbjct: 247 LLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAIL 306
Query: 588 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALL 647
F+DEIDAI +R E + E +R + +LL MDG + V +I ATNRP+++D AL
Sbjct: 307 FIDEIDAIAPKR--EKAHGEVE-KRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALR 363
Query: 648 RPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
R GR DR+I+I +P+ RLEIL+IH + K GE
Sbjct: 364 RFGRFDREIDIGIPDAVGRLEILRIHTKNM-KLGE 397
Score = 292 (107.8 bits), Expect = 2.5e-40, Sum P(2) = 2.5e-40
Identities = 67/188 (35%), Positives = 105/188 (55%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + + + ++ + GES +R++F+ AR PC++F DE+D+I R
Sbjct: 532 LAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKAR 591
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
A R + ++L +MDG ++ V +I ATNRPD +DPA+LRPGRLD+ I IP
Sbjct: 592 GGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIP 651
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRS-- 433
LP+E +RL + S+ P++ ++D + K + F+GADL +C A AIR
Sbjct: 652 LPDEASRL-QIFKASLRKTPLS--ADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESI 708
Query: 434 EREYVTQE 441
ERE + QE
Sbjct: 709 ERE-IRQE 715
Score = 222 (83.2 bits), Expect = 1.9e-81, Sum P(2) = 1.9e-81
Identities = 40/93 (43%), Positives = 65/93 (69%)
Query: 144 TIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGIT 203
T++ Y E DP+ E ++ Y +GG+ +Q+ +++E++ELPL +P+LF+ +G+
Sbjct: 185 TVIHY---EGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVK 241
Query: 204 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
PP+G LL+GPPGTGKTL+ARAVA++ A F +
Sbjct: 242 PPRGILLFGPPGTGKTLIARAVANETGAFFFLI 274
Score = 188 (71.2 bits), Expect = 9.3e-37, Sum P(2) = 9.3e-37
Identities = 35/74 (47%), Positives = 53/74 (71%)
Query: 163 EDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLA 222
E P + T+S IGGL REL+E+++ P+ +PE + + G+ P +G L YGPPG GKTLLA
Sbjct: 475 ETP-NTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLA 533
Query: 223 RAVASQLDANFLKV 236
+A+A++ ANF+ +
Sbjct: 534 KAIANECQANFISI 547
Score = 63 (27.2 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 37/176 (21%), Positives = 81/176 (46%)
Query: 41 LTKQYDKSENDL-KALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQV-SLS 98
++K +SE++L KA ++ + + +++ + + +K+ +++ + V Q+ +L
Sbjct: 280 MSKMSGESESNLRKAFAECEKNSPAILFI-DEIDAIAPKREKAHGEVEK-RIVSQLLTLM 337
Query: 99 TSV-SKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRY------LPR 151
+ ++ V++ ATN P + G R+ + + + + L I+R L
Sbjct: 338 DGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGE 397
Query: 152 EVD-PLVYNMSHEDPG-DITYSAIGGLSEQIRELREVIELP--LLNPELFQRVGIT 203
+VD V N H G D+ +QIRE E+I+L ++ E+ + +T
Sbjct: 398 DVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVT 453
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 114/200 (57%), Positives = 149/200 (74%)
Query: 482 DFMKAVRKVSDNKK-----LESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGT 535
+ MK V KV D+ L+ ++ + K VIELP+ +PELF+ +GI PKG LLYGPPGT
Sbjct: 148 NLMK-VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 206
Query: 536 GKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI 595
GKTLLARAVA D F++V S +V KYIGE +R++RE+F AR H P IIFMDEID+I
Sbjct: 207 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 266
Query: 596 GGRRFSEGT-SADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDR 654
G R G+ + D E+QRT++ELLNQ+DGF++ ++K++MATNR D LD ALLRPGR+DR
Sbjct: 267 GSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDR 326
Query: 655 KIEIPLPNEQARLEILKIHA 674
KIE P PNE++R +ILKIH+
Sbjct: 327 KIEFPNPNEESRFDILKIHS 346
Score = 489 (177.2 bits), Expect = 2.5e-81, Sum P(2) = 2.5e-81
Identities = 100/203 (49%), Positives = 137/203 (67%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH + T+ S +V KYIGE +R++RE+F AR H P IIFMDEID+IG R
Sbjct: 211 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSAR 270
Query: 316 FSEGT-SADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEI 374
G+ + D E+QRT++ELLNQ+DGF++ ++K++MATNR D LD ALLRPGR+DRKIE
Sbjct: 271 MESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEF 330
Query: 375 PLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE 434
P PNE++R + IH+ + ID + + + + +GA+L+ VCTEAG+FA+R
Sbjct: 331 PNPNEESRFDI---LKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRER 387
Query: 435 REYVTQEDFMKAVRKV--SDNKK 455
R +VTQEDF AV KV D +K
Sbjct: 388 RVHVTQEDFEMAVAKVMKKDTEK 410
Score = 353 (129.3 bits), Expect = 2.5e-81, Sum P(2) = 2.5e-81
Identities = 88/208 (42%), Positives = 118/208 (56%)
Query: 36 EQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQ- 94
+Q + L K Y + ++L+ LQ ++L + + Q EL + +L+ LQ G
Sbjct: 27 KQGEGLNKYYLQHLDELQRLQREKSYNL--NRLEAQRNELNSRVRMLREELQLLQEPGSY 84
Query: 95 VSLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVD 154
V V V+VK +YVV + +D KL TRVAL + + LP +VD
Sbjct: 85 VGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVD 144
Query: 155 PLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPP 214
PLV M E D TY IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPP
Sbjct: 145 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPP 204
Query: 215 GTGKTLLARAVASQLDANFLKVVSSLFV 242
GTGKTLLARAVA D F++V S V
Sbjct: 205 GTGKTLLARAVAHHTDCTFIRVSGSELV 232
Score = 89 (36.4 bits), Expect = 3.5e-38, Sum P(2) = 3.5e-38
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKV--SDNKK 495
TEAG+FA+R R +VTQEDF AV KV D +K
Sbjct: 377 TEAGMFALRERRVHVTQEDFEMAVAKVMKKDTEK 410
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 622 (224.0 bits), Expect = 4.0e-81, Sum P(2) = 4.0e-81
Identities = 158/400 (39%), Positives = 227/400 (56%)
Query: 275 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 334
+IV KY+GE+ IR++FN A+ QP IIFMDEID+I R S+ S + E R + +LL
Sbjct: 299 SIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEIDSIAPSRTSDD-SGETE-SRVVAQLL 356
Query: 335 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAG 394
MDG G++ +I ATNRP+++D AL RPGR D+++EI +P+ +AR A
Sbjct: 357 TVMDGMGDNGRIVVIGATNRPNSIDSALRRPGRFDQEVEIGIPDVEAR--EEILTKQFAK 414
Query: 395 PIAKHGEIDYEAVVKLSDS---FNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVS 451
++ +I E + ++ + GADL +C E+ + AI + +K V
Sbjct: 415 MNSEKCQITKEEIASIASKTHGYVGADLTALCRESVMKAINRGLTVGIPQTAIKVT--VD 472
Query: 452 DNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKPVIELPLL 511
D + H + + I E V D + ++L+ KL V++LPL
Sbjct: 473 D---VYHALPEIRPSAMREIFLEMPKVHWSD-------IGGQEELKRKLI--EVVQLPLE 520
Query: 512 NPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARL 571
+ F+ +G++ PKG LLYGPPG KTL A+A+A++ NFL V I +KY+GES R
Sbjct: 521 ASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERA 580
Query: 572 IREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVK 631
IRE+F AR P IIF DEIDAI G R +G S+ L LLN++DG + L V
Sbjct: 581 IREIFRKARAASPSIIFFDEIDAIAGDR--DGDSSTTAASNVLTSLLNEIDGVEELKGVV 638
Query: 632 MIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
++ ATN+P +DPALLRPGRLDR I + P+ ARL+IL+
Sbjct: 639 IVGATNKPTEIDPALLRPGRLDRHIYVAPPDYDARLQILQ 678
Score = 421 (153.3 bits), Expect = 1.8e-36, P = 1.8e-36
Identities = 99/234 (42%), Positives = 140/234 (59%)
Query: 438 VTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLE 497
+ D + +V VS S F RS+ + Q+ V +S K++E
Sbjct: 182 IKDSDSLLSVHTVSPPYLFSPTTSINVATSSFPARSKYPNLPQQITYDQVGGLS--KQIE 239
Query: 498 SKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL-DANFLKVV 556
K IELPL NP LF GI+PP+G LL+GPPGTGKT+L R VA+ + +A+ L +
Sbjct: 240 L---LKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRCVANSITEAHVLTIN 296
Query: 557 SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLME 616
+IV KY+GE+ IR++FN A+ QP IIFMDEID+I R S+ S + E R + +
Sbjct: 297 GPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEIDSIAPSRTSDD-SGETE-SRVVAQ 354
Query: 617 LLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEIL 670
LL MDG G++ +I ATNRP+++D AL RPGR D+++EI +P+ +AR EIL
Sbjct: 355 LLTVMDGMGDNGRIVVIGATNRPNSIDSALRRPGRFDQEVEIGIPDVEAREEIL 408
Score = 322 (118.4 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 78/198 (39%), Positives = 113/198 (57%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
I +KY+GES R IRE+F AR P IIF DEIDAI G R +G S+ L LLN
Sbjct: 569 IFNKYVGESERAIREIFRKARAASPSIIFFDEIDAIAGDR--DGDSSTTAASNVLTSLLN 626
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
++DG + L V ++ ATN+P +DPALLRPGRLDR I + P+ ARL S
Sbjct: 627 EIDGVEELKGVVIVGATNKPTEIDPALLRPGRLDRHIYVAPPDYDARLQILQKCSRKFNL 686
Query: 396 IAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY--VTQEDFMKAVRKVSDN 453
+ +D + + +L+D +GA++ +C EAGL AI +E VT + F A++ +S
Sbjct: 687 QSGDESVDLQKLAELTDGCSGAEVTLLCQEAGLAAIMENKEATTVTNKHFEHALKGISRG 746
Query: 454 ---KKLDHCNSYRTEAGL 468
+ L++ + ++GL
Sbjct: 747 ITPEMLEYYEKFSKKSGL 764
Score = 211 (79.3 bits), Expect = 4.0e-81, Sum P(2) = 4.0e-81
Identities = 41/81 (50%), Positives = 54/81 (66%)
Query: 165 PGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARA 224
P ITY +GGLS+QI L+ IELPL NP LF GI+PP+G LL+GPPGTGKT+L R
Sbjct: 223 PQQITYDQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRC 282
Query: 225 VASQLDANFLKVVSSLFVTSK 245
VA+ + + ++ + SK
Sbjct: 283 VANSITEAHVLTINGPSIVSK 303
Score = 185 (70.2 bits), Expect = 6.8e-40, Sum P(2) = 6.8e-40
Identities = 56/173 (32%), Positives = 88/173 (50%)
Query: 69 REQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKA 128
RE++ LTKQ+ K ++ K + + +++ SK + G CR + KA
Sbjct: 404 REEI--LTKQFAKMNSE-KC--QITKEEIASIASKTHGYV-----GADLTALCRESVMKA 453
Query: 129 KLKSGTRVALDMTTLTIM-----RYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIREL 183
+ G V + T + + LP E+ P + + +S IGG E R+L
Sbjct: 454 -INRGLTVGIPQTAIKVTVDDVYHALP-EIRPSAMREIFLEMPKVHWSDIGGQEELKRKL 511
Query: 184 REVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
EV++LPL + F+ +G++ PKG LLYGPPG KTL A+A+A++ NFL V
Sbjct: 512 IEVVQLPLEASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLAV 564
Score = 42 (19.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 465 EAGLFAIRSEREY--VTQEDFMKAVRKVS 491
EAGL AI +E VT + F A++ +S
Sbjct: 716 EAGLAAIMENKEATTVTNKHFEHALKGIS 744
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 108/181 (59%), Positives = 140/181 (77%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S +V
Sbjct: 189 REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 248
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+NQ+D
Sbjct: 249 KYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLD 308
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
GFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP+ + R I KIHA ++ +
Sbjct: 309 GFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERD 368
Query: 683 I 683
I
Sbjct: 369 I 369
Score = 521 (188.5 bits), Expect = 4.2e-81, Sum P(2) = 4.2e-81
Identities = 97/193 (50%), Positives = 137/193 (70%)
Query: 258 RRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 317
R + + + S +V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF
Sbjct: 228 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFD 287
Query: 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLP 377
+G D E+QRT++EL+NQ+DGFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP
Sbjct: 288 DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 347
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY 437
+ + R H + IHA ++ +I +E + +L + GA++R+VCTEAG+FAIR+ R+
Sbjct: 348 DLEGR-THIF--KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 404
Query: 438 VTQEDFMKAVRKV 450
T++DF++AV KV
Sbjct: 405 ATEKDFLEAVNKV 417
Score = 312 (114.9 bits), Expect = 4.2e-81, Sum P(2) = 4.2e-81
Identities = 64/135 (47%), Positives = 86/135 (63%)
Query: 108 IVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGD 167
I+ ++VV Q+ ++ G RV +D I LP ++DP V M E+ D
Sbjct: 113 IINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPD 172
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+TYS +GG EQI +LREV+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA+
Sbjct: 173 VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 232
Query: 228 QLDANFLKVVSSLFV 242
+ DA F++V+ S V
Sbjct: 233 RTDACFIRVIGSELV 247
Score = 93 (37.8 bits), Expect = 4.4e-32, Sum P(2) = 4.4e-32
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 428 LFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAV 487
+F I + V ++ + + ++ N S TEAG+FAIR+ R+ T++DF++AV
Sbjct: 355 IFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAV 414
Query: 488 RKV 490
KV
Sbjct: 415 NKV 417
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 103/172 (59%), Positives = 135/172 (78%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+ELPLL+PE F +GI PPKG LLYGPPGTGKTL ARAVA++ DA F++V+ S +V
Sbjct: 222 REVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQ 281
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE AR++RE+F AR + CIIF DEIDA+GG RF +G D E+QRT++EL+ Q+D
Sbjct: 282 KYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLD 341
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
GFD G +K++ ATNRP+TLDPALLRPGR+DRK+E LP+ + R I +IH+
Sbjct: 342 GFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHS 393
Score = 509 (184.2 bits), Expect = 4.5e-81, Sum P(2) = 4.5e-81
Identities = 99/206 (48%), Positives = 141/206 (68%)
Query: 258 RRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 317
R + + T+ S +V KY+GE AR++RE+F AR + CIIF DEIDA+GG RF
Sbjct: 261 RAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFD 320
Query: 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLP 377
+G D E+QRT++EL+ Q+DGFD G +K++ ATNRP+TLDPALLRPGR+DRK+E LP
Sbjct: 321 DGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLP 380
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY 437
+ + R A+ + IH+ ++ I +E + +L + GA+LR+VCTEAG+FAIR+ R+
Sbjct: 381 DLEGR-ANIF--RIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKV 437
Query: 438 VTQEDFMKAVRKV-SDNKKLDHCNSY 462
T++DF+KAV KV S KK + Y
Sbjct: 438 ATEKDFLKAVDKVISGYKKFSSTSRY 463
Score = 327 (120.2 bits), Expect = 4.5e-81, Sum P(2) = 4.5e-81
Identities = 64/127 (50%), Positives = 87/127 (68%)
Query: 116 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 175
++VVG ++ ++ G RV +D + I LP +DP V M+ E+ D+TYS +GG
Sbjct: 154 KFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGG 213
Query: 176 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 235
+QI +LREV+ELPLL+PE F +GI PPKG LLYGPPGTGKTL ARAVA++ DA F++
Sbjct: 214 CKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIR 273
Query: 236 VVSSLFV 242
V+ S V
Sbjct: 274 VIGSELV 280
Score = 108 (43.1 bits), Expect = 1.2e-34, Sum P(2) = 1.2e-34
Identities = 29/78 (37%), Positives = 42/78 (53%)
Query: 426 AGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
A +F I S+ V + + + ++ N S TEAG+FAIR+ R+ T++DF+K
Sbjct: 386 ANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLK 445
Query: 486 AVRKV-SDNKKLESKLDY 502
AV KV S KK S Y
Sbjct: 446 AVDKVISGYKKFSSTSRY 463
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 611 (220.1 bits), Expect = 5.1e-81, Sum P(2) = 5.1e-81
Identities = 150/418 (35%), Positives = 226/418 (54%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F I+ K GES +R+ F A + P IIF+DE+DAI +R E T + E +
Sbjct: 268 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-R 324
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
R + +LL MDG V ++ ATNRP+++D AL R GR DR+I+I +P+ RL
Sbjct: 325 RIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREIDIGIPDSTGRLEI-- 382
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ IH + ++D E + + GADL +C+EA L AIR + + ED
Sbjct: 383 -LQIHTKNMKLSEDVDLEQISAETHGHVGADLAALCSEAALQAIRKKMTLIDLED----- 436
Query: 448 RKVSDNKKLDHCNSYRTEAGLF--AIRSEREYVTQEDFMKAVR-KVSDNKKL-ESKLDYK 503
D+ D NS F A+ +E ++ D L E K + +
Sbjct: 437 ----DSIDADLLNSLAVTMDDFKWALSQSNPSALRETVVEVPHVNWEDIGGLDEVKRELQ 492
Query: 504 PVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 563
+++ P+ P+ F + G+TP +G L YGPPG GKTLLA+A+A++ ANF+ + ++
Sbjct: 493 ELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQANFVSIKGPELLTM 552
Query: 564 YIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 623
+ GES +R++F+ AR PCI+F DE+D+I R A R + ++L +MDG
Sbjct: 553 WFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGGGAGDAGGAADRVINQILTEMDG 612
Query: 624 FDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAK 679
+ V +I ATNRPD +DPA+LRPGRLD+ I IPLP+ +R IL+ + P+AK
Sbjct: 613 MTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDMPSRTAILRANLRKSPVAK 670
Score = 410 (149.4 bits), Expect = 3.6e-35, P = 3.6e-35
Identities = 115/305 (37%), Positives = 168/305 (55%)
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNG--ADLRNVCTEAG-LFAIRS- 433
N + RL ISIH P K+G+ + V+ + D+ G +L +V + L A R
Sbjct: 93 NLRVRLGDV--ISIHPCPDVKYGKRIH--VLPIDDTIEGLTGNLFDVFLKPYFLEAYRPV 148
Query: 434 -EREYVTQEDFMKAVR-KVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVS 491
+ + M+AV KV + HC A I E E + +ED +++ +
Sbjct: 149 HKGDIFLVRGGMRAVEFKVVETDPTPHC----IVAPDTIIHCEGEPIKREDEEESLNDIG 204
Query: 492 --DNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL 548
D +L K ++ELPL +P LF+ +G+ PP+G LLYGPPGTGKTL+ARAVA++
Sbjct: 205 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLVARAVANET 264
Query: 549 DANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADR 608
A F + I+ K GES +R+ F A + P IIF+DE+DAI +R E T +
Sbjct: 265 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEV 322
Query: 609 EIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLE 668
E +R + +LL MDG V ++ ATNRP+++D AL R GR DR+I+I +P+ RLE
Sbjct: 323 E-RRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREIDIGIPDSTGRLE 381
Query: 669 ILKIH 673
IL+IH
Sbjct: 382 ILQIH 386
Score = 304 (112.1 bits), Expect = 1.4e-41, Sum P(2) = 1.4e-41
Identities = 73/211 (34%), Positives = 113/211 (53%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
++ + GES +R++F+ AR PCI+F DE+D+I R A R + ++L
Sbjct: 549 LLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGGGAGDAGGAADRVINQILT 608
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
+MDG + V +I ATNRPD +DPA+LRPGRLD+ I IPLP+ +R A ++ P
Sbjct: 609 EMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDMPSRTA-ILRANLRKSP 667
Query: 396 IAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRK-VSDNK 454
+AK ++D + K+++ F+GADL +C A AIR E + + + RK + +
Sbjct: 668 VAK--DVDLMYLSKITEGFSGADLTEICQRACKLAIREAIEAEIRAERQRQARKETAMDD 725
Query: 455 KLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
D R + A+R R V+ D K
Sbjct: 726 DYDPVPEIRKDHFEEAMRFARRSVSDNDIRK 756
Score = 221 (82.9 bits), Expect = 5.1e-81, Sum P(2) = 5.1e-81
Identities = 41/85 (48%), Positives = 59/85 (69%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ E DI Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 187 EGEPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 246
Query: 212 GPPGTGKTLLARAVASQLDANFLKV 236
GPPGTGKTL+ARAVA++ A F +
Sbjct: 247 GPPGTGKTLVARAVANETGAFFFLI 271
Score = 194 (73.4 bits), Expect = 9.8e-39, Sum P(2) = 9.8e-39
Identities = 55/194 (28%), Positives = 96/194 (49%)
Query: 44 QYDKSENDLKALQSVGQHDLL-LHCVREQLKELTKQYDKSENDLKALQSVGQVSLSTSVS 102
++D+ E D+ S G+ ++L +H +L E D + A ++ G V + +
Sbjct: 364 RFDR-EIDIGIPDSTGRLEILQIHTKNMKLSE-----DVDLEQISA-ETHGHVGADLA-A 415
Query: 103 KCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSH 162
C ++A ++ A L + V +D + + P + V + H
Sbjct: 416 LCSEAALQAIRKKMTLIDLEDDSIDADLLNSLAVTMDDFKWALSQSNPSALRETVVEVPH 475
Query: 163 EDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLA 222
+ + IGGL E REL+E+++ P+ P+ F + G+TP +G L YGPPG GKTLLA
Sbjct: 476 -----VNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLA 530
Query: 223 RAVASQLDANFLKV 236
+A+A++ ANF+ +
Sbjct: 531 KAIANECQANFVSI 544
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 582 (209.9 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 104/176 (59%), Positives = 138/176 (78%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+ELPLL+PE F ++GI PPKG +LYGPPGTGKTL ARAVA++ DA F++V+ S +V
Sbjct: 192 REVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQ 251
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE AR++RE+F AR + CIIF DEIDAIGG RF +G D E+QRT++EL+ Q+D
Sbjct: 252 KYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLD 311
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIA 678
GFD G +K++ ATNRP+TLD AL+RPGR+DRK+E LP+ + R IL+IHA +A
Sbjct: 312 GFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMA 367
Score = 514 (186.0 bits), Expect = 8.9e-81, Sum P(2) = 8.9e-81
Identities = 100/206 (48%), Positives = 139/206 (67%)
Query: 258 RRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 317
R + + T+ S +V KY+GE AR++RE+F AR + CIIF DEIDAIGG RF
Sbjct: 231 RAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFD 290
Query: 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLP 377
+G D E+QRT++EL+ Q+DGFD G +K++ ATNRP+TLD AL+RPGR+DRK+E LP
Sbjct: 291 DGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLP 350
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY 437
+ + R AH + IHA +A +I +E + +L S GA+LR+VCTEAG+FAIR+ R
Sbjct: 351 DLEGR-AHI--LRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRV 407
Query: 438 VTQEDFMKAVRKV-SDNKKLDHCNSY 462
T++DF+ AV+KV N+K Y
Sbjct: 408 ATEKDFLDAVQKVVKGNQKFSSTADY 433
Score = 318 (117.0 bits), Expect = 8.9e-81, Sum P(2) = 8.9e-81
Identities = 62/127 (48%), Positives = 83/127 (65%)
Query: 116 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 175
++VV ++ ++ G RV D I LP ++DP V M E+ D+TY +GG
Sbjct: 124 KFVVSLGERVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGG 183
Query: 176 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 235
EQI LREV+ELPLL+PE F ++GI PPKG +LYGPPGTGKTL ARAVA++ DA F++
Sbjct: 184 CKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIR 243
Query: 236 VVSSLFV 242
V+ S V
Sbjct: 244 VIGSELV 250
Score = 102 (41.0 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKV-SDNKKLESKLDY 502
TEAG+FAIR+ R T++DF+ AV+KV N+K S DY
Sbjct: 394 TEAGMFAIRARRRVATEKDFLDAVQKVVKGNQKFSSTADY 433
Score = 45 (20.9 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 13/71 (18%), Positives = 36/71 (50%)
Query: 440 QEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVR--KVSDNKKLE 497
+ED +++++D + ++ + + ++R+ +++E ++ R K+ +N++
Sbjct: 51 KEDTEAVLKRINDTVGIKESDTGLAPISFWDVAADRQRMSEEQPLQVARCTKIIENEQSA 110
Query: 498 SKLDYKPVIEL 508
K Y VI L
Sbjct: 111 EKNAY--VINL 119
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 105/172 (61%), Positives = 137/172 (79%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+E+PLL+PE F +GI PPKG L+YGPPGTGKTL ARAVA++ DA F++V+ S +V
Sbjct: 183 REVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVANRTDAAFVRVIGSELVQ 242
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE AR++R++F AR+ + CIIF DE+DAIGG RF +G D E+QRT++EL+NQ+D
Sbjct: 243 KYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLD 302
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
GFD G +K++MATNRPDTLDPALLRPGRLDRK+E LP+ + R I IHA
Sbjct: 303 GFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHIFTIHA 354
Score = 523 (189.2 bits), Expect = 1.4e-80, Sum P(2) = 1.4e-80
Identities = 97/193 (50%), Positives = 141/193 (73%)
Query: 258 RRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 317
R + + + S +V KY+GE AR++R++F AR+ + CIIF DE+DAIGG RF
Sbjct: 222 RAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGGARFD 281
Query: 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLP 377
+G D E+QRT++EL+NQ+DGFD G +K++MATNRPDTLDPALLRPGRLDRK+E LP
Sbjct: 282 DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 341
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY 437
+ + R AH + +IHA ++ +I +E + +L + GAD+R+VCTEAG+FAIR+ R+
Sbjct: 342 DLEGR-AHIF--TIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKV 398
Query: 438 VTQEDFMKAVRKV 450
V+++DF++A+ KV
Sbjct: 399 VSEKDFLEAIDKV 411
Score = 305 (112.4 bits), Expect = 1.4e-80, Sum P(2) = 1.4e-80
Identities = 62/127 (48%), Positives = 83/127 (65%)
Query: 116 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 175
++VV +L ++ G RV +D I LP ++D V M E+ DITY +GG
Sbjct: 115 KFVVALGDKLSPTDVEEGIRVGVDRNKYQIQIPLPPKIDASVTMMQVEEKPDITYKDVGG 174
Query: 176 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 235
EQI +LREV+E+PLL+PE F +GI PPKG L+YGPPGTGKTL ARAVA++ DA F++
Sbjct: 175 CKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVANRTDAAFVR 234
Query: 236 VVSSLFV 242
V+ S V
Sbjct: 235 VIGSELV 241
Score = 89 (36.4 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 426 AGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
A +F I ++ ++ + + ++ N S TEAG+FAIR+ R+ V+++DF++
Sbjct: 347 AHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKVVSEKDFLE 406
Query: 486 AVRKV 490
A+ KV
Sbjct: 407 AIDKV 411
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 121/254 (47%), Positives = 170/254 (66%)
Query: 428 LFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAV 487
L + E +YV D + K++ + ++ + R ++ + + + + MK V
Sbjct: 98 LVKVHPEGKYVVDIDKSIDITKITPSTRV----ALRNDSYVLHLVLPSKVDPLVNLMK-V 152
Query: 488 RKVSDNKK-----LESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLA 541
KV D+ L+ ++ + K VIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLA
Sbjct: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
Query: 542 RAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 601
RAVA D F++V S +V KYIGE +R++RE+F AR H P IIFMDEID+IG R
Sbjct: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
Query: 602 EGT-SADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPL 660
G+ + D E+QRT++ELLNQ+DGF++ ++K++MATNR D LD ALLRPGR+DRKIE P
Sbjct: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
Query: 661 PNEQARLEILKIHA 674
PNE++R +ILKIH+
Sbjct: 333 PNEESRFDILKIHS 346
Score = 489 (177.2 bits), Expect = 2.2e-80, Sum P(2) = 2.2e-80
Identities = 100/203 (49%), Positives = 137/203 (67%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH + T+ S +V KYIGE +R++RE+F AR H P IIFMDEID+IG R
Sbjct: 211 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSAR 270
Query: 316 FSEGT-SADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEI 374
G+ + D E+QRT++ELLNQ+DGF++ ++K++MATNR D LD ALLRPGR+DRKIE
Sbjct: 271 MESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEF 330
Query: 375 PLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE 434
P PNE++R + IH+ + ID + + + + +GA+L+ VCTEAG+FA+R
Sbjct: 331 PNPNEESRFDI---LKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRER 387
Query: 435 REYVTQEDFMKAVRKV--SDNKK 455
R +VTQEDF AV KV D +K
Sbjct: 388 RVHVTQEDFEMAVAKVMKKDTEK 410
Score = 344 (126.2 bits), Expect = 2.2e-80, Sum P(2) = 2.2e-80
Identities = 89/223 (39%), Positives = 122/223 (54%)
Query: 21 LTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQLKELTKQYD 80
+ E V+G + E LK+ Q+ ++L+ + + Q L+ + Q EL +
Sbjct: 15 MEETCNVKGAAAKQGEGLKQYYLQHI---HELQ--RQLRQKTNNLNRLEAQRNELNSRVR 69
Query: 81 KSENDLKALQSVGQ-VSLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALD 139
+L+ LQ G V V V+VK +YVV + +D K+ TRVAL
Sbjct: 70 MLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALR 129
Query: 140 MTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQR 199
+ + LP +VDPLV M E D TY IGGL +QI+E++EVIELP+ +PELF+
Sbjct: 130 NDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFES 189
Query: 200 VGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
+GI PKG LLYGPPGTGKTLLARAVA D F++V S V
Sbjct: 190 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 232
Score = 89 (36.4 bits), Expect = 3.3e-37, Sum P(2) = 3.3e-37
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKV--SDNKK 495
TEAG+FA+R R +VTQEDF AV KV D +K
Sbjct: 377 TEAGMFALRERRVHVTQEDFEMAVAKVMKKDTEK 410
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 580 (209.2 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 110/174 (63%), Positives = 136/174 (78%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ K VIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++V S +
Sbjct: 160 EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 219
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V K+IGE AR++RE+F AR H P IIFMDEID+IG R G+ D E+QRT++ELLNQ
Sbjct: 220 VQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQ 279
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+DGF++ +K+IMATNR D LD ALLRPGR+DRKIE P PNE+ARL+ILKIH+
Sbjct: 280 LDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHS 333
Score = 496 (179.7 bits), Expect = 5.6e-80, Sum P(2) = 5.6e-80
Identities = 101/202 (50%), Positives = 136/202 (67%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH + T+ S +V K+IGE AR++RE+F AR H P IIFMDEID+IG R
Sbjct: 199 LARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 258
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
G+ D E+QRT++ELLNQ+DGF++ +K+IMATNR D LD ALLRPGR+DRKIE P
Sbjct: 259 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 318
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
PNE+ARL + IH+ + I+ + +L +GA+++ VCTEAG++A+R R
Sbjct: 319 PPNEEARLDI---LKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR 375
Query: 436 EYVTQEDFMKAVRKV--SDNKK 455
+VTQEDF AV KV D++K
Sbjct: 376 VHVTQEDFEMAVAKVMQKDSEK 397
Score = 332 (121.9 bits), Expect = 5.6e-80, Sum P(2) = 5.6e-80
Identities = 84/202 (41%), Positives = 115/202 (56%)
Query: 43 KQYDKSENDLKALQ-SVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQ-VSLSTS 100
+QY S+ ++ LQ +V + L ++ Q EL + +L+ LQ G V
Sbjct: 21 RQYYLSK--IEELQLTVNEKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVR 78
Query: 101 VSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNM 160
V V+VK ++VV + +D + RVAL + T+ + LP +VDPLV M
Sbjct: 79 VMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLM 138
Query: 161 SHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTL 220
E D TY IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTL
Sbjct: 139 MVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTL 198
Query: 221 LARAVASQLDANFLKVVSSLFV 242
LARAVA D F++V S V
Sbjct: 199 LARAVAHHTDCTFIRVSGSELV 220
Score = 88 (36.0 bits), Expect = 8.6e-36, Sum P(2) = 8.6e-36
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYK 503
TEAG++A+R R +VTQEDF AV KV K E + K
Sbjct: 364 TEAGMYALRERRVHVTQEDFEMAVAKVMQ-KDSEKNMSIK 402
Score = 45 (20.9 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 11/36 (30%), Positives = 22/36 (61%)
Query: 9 VRHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQ 44
V K+ Q+ R+ + E+ ++R +RE+L+ L +Q
Sbjct: 35 VNEKS-QNLRRLQAQRNELNAKVRLLREELQLLQEQ 69
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 580 (209.2 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 110/174 (63%), Positives = 136/174 (78%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ K VIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++V S +
Sbjct: 160 EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 219
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V K+IGE AR++RE+F AR H P IIFMDEID+IG R G+ D E+QRT++ELLNQ
Sbjct: 220 VQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQ 279
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+DGF++ +K+IMATNR D LD ALLRPGR+DRKIE P PNE+ARL+ILKIH+
Sbjct: 280 LDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHS 333
Score = 496 (179.7 bits), Expect = 7.1e-80, Sum P(2) = 7.1e-80
Identities = 101/202 (50%), Positives = 136/202 (67%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH + T+ S +V K+IGE AR++RE+F AR H P IIFMDEID+IG R
Sbjct: 199 LARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 258
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
G+ D E+QRT++ELLNQ+DGF++ +K+IMATNR D LD ALLRPGR+DRKIE P
Sbjct: 259 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 318
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
PNE+ARL + IH+ + I+ + +L +GA+++ VCTEAG++A+R R
Sbjct: 319 PPNEEARLDI---LKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR 375
Query: 436 EYVTQEDFMKAVRKV--SDNKK 455
+VTQEDF AV KV D++K
Sbjct: 376 VHVTQEDFEMAVAKVMQKDSEK 397
Score = 331 (121.6 bits), Expect = 7.1e-80, Sum P(2) = 7.1e-80
Identities = 85/205 (41%), Positives = 118/205 (57%)
Query: 43 KQYDKSENDLKALQ-SVGQHDLLLHCVREQLKELTKQYDKSENDLKALQS----VGQVSL 97
+QY S+ ++ LQ +V + L ++ Q EL + +L+ LQ VG+V
Sbjct: 21 RQYYLSK--IEELQLTVNEKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVR 78
Query: 98 STSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLV 157
+ K V+VK ++VV + +D + RVAL + T+ + LP +VDPLV
Sbjct: 79 AMDKKK---VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLV 135
Query: 158 YNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTG 217
M E D TY IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTG
Sbjct: 136 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 195
Query: 218 KTLLARAVASQLDANFLKVVSSLFV 242
KTLLARAVA D F++V S V
Sbjct: 196 KTLLARAVAHHTDCTFIRVSGSELV 220
Score = 88 (36.0 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYK 503
TEAG++A+R R +VTQEDF AV KV K E + K
Sbjct: 364 TEAGMYALRERRVHVTQEDFEMAVAKVMQ-KDSEKNMSIK 402
Score = 45 (20.9 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 11/36 (30%), Positives = 22/36 (61%)
Query: 9 VRHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQ 44
V K+ Q+ R+ + E+ ++R +RE+L+ L +Q
Sbjct: 35 VNEKS-QNLRRLQAQRNELNAKVRLLREELQLLQEQ 69
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 562 (202.9 bits), Expect = 1.3e-57, Sum P(2) = 1.3e-57
Identities = 106/174 (60%), Positives = 134/174 (77%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ K VIELP+ +PELF +GI PKG LL+GPPGTGKTLLARAVA + F++V S +
Sbjct: 170 EIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHTECTFIRVSGSEL 229
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V K+IGE AR++RE+F AR H P IIFMDEID+IG R + D E+QRT++ELLNQ
Sbjct: 230 VQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQ 289
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+DGF++ +K+IMATNR D LDPALLRPGR+DRKIE P P+E+AR +ILKIH+
Sbjct: 290 LDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPAPDEKARADILKIHS 343
Score = 486 (176.1 bits), Expect = 8.1e-80, Sum P(2) = 8.1e-80
Identities = 101/202 (50%), Positives = 136/202 (67%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH E T+ S +V K+IGE AR++RE+F AR H P IIFMDEID+IG R
Sbjct: 209 LARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 268
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
+ D E+QRT++ELLNQ+DGF++ +K+IMATNR D LDPALLRPGR+DRKIE P
Sbjct: 269 VEGSSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFP 328
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
P+E+AR A + IH+ + I+ + + +GA++++VCTEAG+FA+R R
Sbjct: 329 APDEKAR-ADI--LKIHSRKMNLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFALRERR 385
Query: 436 EYVTQEDFMKAVRKV--SDNKK 455
+VTQEDF AV KV D++K
Sbjct: 386 IHVTQEDFEMAVGKVMQKDSEK 407
Score = 342 (125.4 bits), Expect = 8.1e-80, Sum P(2) = 8.1e-80
Identities = 86/217 (39%), Positives = 121/217 (55%)
Query: 30 RLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKAL 89
+L E ++ K L K + +D A Q V + ++ Q EL + + +L+ L
Sbjct: 20 KLTEESDE-KTLRKYFSTKVDD--AQQKVADKSQNVRRLQAQRNELNTKVRMLKEELQQL 76
Query: 90 QS----VGQVSLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTI 145
VG+VS + K V+VK +YVV + +D L +G RVAL + +
Sbjct: 77 HEQGSYVGEVSKAMDKKK---VLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYAL 133
Query: 146 MRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPP 205
+ LP +VDPLV M E D TY +GGL +QI+E++EVIELP+ +PELF +GI P
Sbjct: 134 HKLLPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP 193
Query: 206 KGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
KG LL+GPPGTGKTLLARAVA + F++V S V
Sbjct: 194 KGVLLFGPPGTGKTLLARAVAHHTECTFIRVSGSELV 230
Score = 89 (36.4 bits), Expect = 5.5e-37, Sum P(2) = 5.5e-37
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYK 503
TEAG+FA+R R +VTQEDF AV KV K E + K
Sbjct: 374 TEAGMFALRERRIHVTQEDFEMAVGKVMQ-KDSEKNMSIK 412
Score = 48 (22.0 bits), Expect = 1.3e-57, Sum P(2) = 1.3e-57
Identities = 11/42 (26%), Positives = 25/42 (59%)
Query: 6 VDEVRHKTL---QDYRKKLTEHAEVEGRLREMREQLKELTKQ 44
VD+ + K Q+ R+ + E+ ++R ++E+L++L +Q
Sbjct: 38 VDDAQQKVADKSQNVRRLQAQRNELNTKVRMLKEELQQLHEQ 79
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 581 (209.6 bits), Expect = 2.6e-59, Sum P(2) = 2.6e-59
Identities = 109/174 (62%), Positives = 136/174 (78%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ K VIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA + F++V S +
Sbjct: 159 EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSEL 218
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V K+IGE +R++RE+F AR H P IIFMDEID+IG R G+ D E+QRT++ELLNQ
Sbjct: 219 VQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQ 278
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+DGF++ +K+IMATNR D LDPALLRPGR+DRKIE P PNE+ARL+ILKIH+
Sbjct: 279 LDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHS 332
Score = 506 (183.2 bits), Expect = 1.2e-79, Sum P(2) = 1.2e-79
Identities = 102/202 (50%), Positives = 137/202 (67%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH E T+ S +V K+IGE +R++RE+F AR H P IIFMDEID+IG R
Sbjct: 198 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSR 257
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
G+ D E+QRT++ELLNQ+DGF++ +K+IMATNR D LDPALLRPGR+DRKIE P
Sbjct: 258 IESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFP 317
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
PNE+ARL + IH+ + I+ + +L +GA+++ VCTEAG++A+R R
Sbjct: 318 PPNEEARLDI---LKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR 374
Query: 436 EYVTQEDFMKAVRKV--SDNKK 455
+VTQEDF AV KV D++K
Sbjct: 375 VHVTQEDFEMAVAKVMQKDSEK 396
Score = 317 (116.6 bits), Expect = 1.2e-79, Sum P(2) = 1.2e-79
Identities = 77/182 (42%), Positives = 104/182 (57%)
Query: 65 LHCVREQLKELTKQYDKSENDLKALQS----VGQVSLSTSVSKCWTVIVKATNGPRYVVG 120
L ++ Q EL + +L+ LQ VG+V K V+VK ++VV
Sbjct: 41 LRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKK---VLVKVHPEGKFVVD 97
Query: 121 CRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQI 180
+ +D + RVAL + T+ + LP +VDPLV M E D TY +GGL +QI
Sbjct: 98 LDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQI 157
Query: 181 RELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSL 240
+E++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA + F++V S
Sbjct: 158 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 217
Query: 241 FV 242
V
Sbjct: 218 LV 219
Score = 88 (36.0 bits), Expect = 3.7e-34, Sum P(2) = 3.7e-34
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYK 503
TEAG++A+R R +VTQEDF AV KV K E + K
Sbjct: 363 TEAGMYALRERRVHVTQEDFEMAVAKVMQ-KDSEKNMSIK 401
Score = 45 (20.9 bits), Expect = 2.6e-59, Sum P(2) = 2.6e-59
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 15 QDYRKKLTEHAEVEGRLREMREQLKELTKQ 44
Q+ R+ + E+ ++R +RE+L+ L +Q
Sbjct: 39 QNLRRLQAQRNELNAKVRMLREELQLLQEQ 68
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 580 (209.2 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 110/174 (63%), Positives = 136/174 (78%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ K VIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++V S +
Sbjct: 166 EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 225
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V K+IGE AR++RE+F AR H P IIFMDEID+IG R G+ D E+QRT++ELLNQ
Sbjct: 226 VQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQ 285
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+DGF++ +K+IMATNR D LD ALLRPGR+DRKIE P PNE+ARL+ILKIH+
Sbjct: 286 LDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHS 339
Score = 496 (179.7 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 101/202 (50%), Positives = 136/202 (67%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH + T+ S +V K+IGE AR++RE+F AR H P IIFMDEID+IG R
Sbjct: 205 LARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 264
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
G+ D E+QRT++ELLNQ+DGF++ +K+IMATNR D LD ALLRPGR+DRKIE P
Sbjct: 265 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 324
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
PNE+ARL + IH+ + I+ + +L +GA+++ VCTEAG++A+R R
Sbjct: 325 PPNEEARLDI---LKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR 381
Query: 436 EYVTQEDFMKAVRKV--SDNKK 455
+VTQEDF AV KV D++K
Sbjct: 382 VHVTQEDFEMAVAKVMQKDSEK 403
Score = 328 (120.5 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 85/205 (41%), Positives = 117/205 (57%)
Query: 43 KQYDKSENDLKALQS-VGQHDLLLHCVREQLKELTKQYDKSENDLKALQS----VGQVSL 97
+QY S+ ++ LQ V + L ++ Q EL + +L+ LQ VG+V
Sbjct: 27 RQYYLSK--IEELQLIVNEKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVR 84
Query: 98 STSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLV 157
+ K V+VK ++VV + +D + RVAL + T+ + LP +VDPLV
Sbjct: 85 AMDKKK---VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLV 141
Query: 158 YNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTG 217
M E D TY IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTG
Sbjct: 142 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 201
Query: 218 KTLLARAVASQLDANFLKVVSSLFV 242
KTLLARAVA D F++V S V
Sbjct: 202 KTLLARAVAHHTDCTFIRVSGSELV 226
Score = 88 (36.0 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYK 503
TEAG++A+R R +VTQEDF AV KV K E + K
Sbjct: 370 TEAGMYALRERRVHVTQEDFEMAVAKVMQ-KDSEKNMSIK 408
Score = 45 (20.9 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 11/36 (30%), Positives = 22/36 (61%)
Query: 9 VRHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQ 44
V K+ Q+ R+ + E+ ++R +RE+L+ L +Q
Sbjct: 41 VNEKS-QNLRRLQAQRNELNAKVRLLREELQLLQEQ 75
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 580 (209.2 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 110/174 (63%), Positives = 136/174 (78%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ K VIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++V S +
Sbjct: 168 EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 227
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V K+IGE AR++RE+F AR H P IIFMDEID+IG R G+ D E+QRT++ELLNQ
Sbjct: 228 VQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQ 287
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+DGF++ +K+IMATNR D LD ALLRPGR+DRKIE P PNE+ARL+ILKIH+
Sbjct: 288 LDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHS 341
Score = 496 (179.7 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 101/202 (50%), Positives = 136/202 (67%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH + T+ S +V K+IGE AR++RE+F AR H P IIFMDEID+IG R
Sbjct: 207 LARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 266
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
G+ D E+QRT++ELLNQ+DGF++ +K+IMATNR D LD ALLRPGR+DRKIE P
Sbjct: 267 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 326
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
PNE+ARL + IH+ + I+ + +L +GA+++ VCTEAG++A+R R
Sbjct: 327 PPNEEARLDI---LKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR 383
Query: 436 EYVTQEDFMKAVRKV--SDNKK 455
+VTQEDF AV KV D++K
Sbjct: 384 VHVTQEDFEMAVAKVMQKDSEK 405
Score = 328 (120.5 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 85/205 (41%), Positives = 116/205 (56%)
Query: 43 KQYDKSE-NDLKALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQS----VGQVSL 97
+QY S+ DL+ + V L ++ Q EL + +L+ LQ VG+V
Sbjct: 29 RQYYLSKIEDLQLV--VNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVR 86
Query: 98 STSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLV 157
+ K V+VK ++VV + +D + RVAL + T+ + LP +VDPLV
Sbjct: 87 AMDKKK---VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLV 143
Query: 158 YNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTG 217
M E D TY IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTG
Sbjct: 144 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 203
Query: 218 KTLLARAVASQLDANFLKVVSSLFV 242
KTLLARAVA D F++V S V
Sbjct: 204 KTLLARAVAHHTDCTFIRVSGSELV 228
Score = 88 (36.0 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYK 503
TEAG++A+R R +VTQEDF AV KV K E + K
Sbjct: 372 TEAGMYALRERRVHVTQEDFEMAVAKVMQ-KDSEKNMSIK 410
Score = 44 (20.5 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 15 QDYRKKLTEHAEVEGRLREMREQLKELTKQ 44
Q+ R+ + E+ ++R +RE+L+ L +Q
Sbjct: 48 QNLRRLQAQRNELNAKVRLLREELQLLQEQ 77
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 580 (209.2 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 110/174 (63%), Positives = 136/174 (78%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ K VIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++V S +
Sbjct: 168 EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 227
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V K+IGE AR++RE+F AR H P IIFMDEID+IG R G+ D E+QRT++ELLNQ
Sbjct: 228 VQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQ 287
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+DGF++ +K+IMATNR D LD ALLRPGR+DRKIE P PNE+ARL+ILKIH+
Sbjct: 288 LDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHS 341
Score = 496 (179.7 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 101/202 (50%), Positives = 136/202 (67%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH + T+ S +V K+IGE AR++RE+F AR H P IIFMDEID+IG R
Sbjct: 207 LARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 266
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
G+ D E+QRT++ELLNQ+DGF++ +K+IMATNR D LD ALLRPGR+DRKIE P
Sbjct: 267 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 326
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
PNE+ARL + IH+ + I+ + +L +GA+++ VCTEAG++A+R R
Sbjct: 327 PPNEEARLDI---LKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR 383
Query: 436 EYVTQEDFMKAVRKV--SDNKK 455
+VTQEDF AV KV D++K
Sbjct: 384 VHVTQEDFEMAVAKVMQKDSEK 405
Score = 328 (120.5 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 85/205 (41%), Positives = 116/205 (56%)
Query: 43 KQYDKSE-NDLKALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQS----VGQVSL 97
+QY S+ DL+ + V L ++ Q EL + +L+ LQ VG+V
Sbjct: 29 RQYYLSKIEDLQLV--VNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVR 86
Query: 98 STSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLV 157
+ K V+VK ++VV + +D + RVAL + T+ + LP +VDPLV
Sbjct: 87 AMDKKK---VLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLV 143
Query: 158 YNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTG 217
M E D TY IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTG
Sbjct: 144 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 203
Query: 218 KTLLARAVASQLDANFLKVVSSLFV 242
KTLLARAVA D F++V S V
Sbjct: 204 KTLLARAVAHHTDCTFIRVSGSELV 228
Score = 88 (36.0 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYK 503
TEAG++A+R R +VTQEDF AV KV K E + K
Sbjct: 372 TEAGMYALRERRVHVTQEDFEMAVAKVMQ-KDSEKNMSIK 410
Score = 44 (20.5 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 15 QDYRKKLTEHAEVEGRLREMREQLKELTKQ 44
Q+ R+ + E+ ++R +RE+L+ L +Q
Sbjct: 48 QNLRRLQAQRNELNAKVRLLREELQLLQEQ 77
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 580 (209.2 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 110/174 (63%), Positives = 136/174 (78%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ K VIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++V S +
Sbjct: 160 EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 219
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V K+IGE AR++RE+F AR H P IIFMDEID+IG R G+ D E+QRT++ELLNQ
Sbjct: 220 VQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQ 279
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+DGF++ +K+IMATNR D LD ALLRPGR+DRKIE P PNE+ARL+ILKIH+
Sbjct: 280 LDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHS 333
Score = 496 (179.7 bits), Expect = 2.4e-79, Sum P(2) = 2.4e-79
Identities = 101/202 (50%), Positives = 136/202 (67%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH + T+ S +V K+IGE AR++RE+F AR H P IIFMDEID+IG R
Sbjct: 199 LARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 258
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
G+ D E+QRT++ELLNQ+DGF++ +K+IMATNR D LD ALLRPGR+DRKIE P
Sbjct: 259 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 318
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
PNE+ARL + IH+ + I+ + +L +GA+++ VCTEAG++A+R R
Sbjct: 319 PPNEEARLDI---LKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR 375
Query: 436 EYVTQEDFMKAVRKV--SDNKK 455
+VTQEDF AV KV D++K
Sbjct: 376 VHVTQEDFEMAVAKVMQKDSEK 397
Score = 326 (119.8 bits), Expect = 2.4e-79, Sum P(2) = 2.4e-79
Identities = 85/205 (41%), Positives = 116/205 (56%)
Query: 43 KQYDKSENDLKALQS-VGQHDLLLHCVREQLKELTKQYDKSENDLKALQS----VGQVSL 97
+QY S+ ++ LQ V L ++ Q EL + +L+ LQ VG+V
Sbjct: 21 RQYYLSK--IEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVR 78
Query: 98 STSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLV 157
+ K V+VK ++VV + +D + RVAL + T+ + LP +VDPLV
Sbjct: 79 AMDKKK---VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLV 135
Query: 158 YNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTG 217
M E D TY IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTG
Sbjct: 136 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 195
Query: 218 KTLLARAVASQLDANFLKVVSSLFV 242
KTLLARAVA D F++V S V
Sbjct: 196 KTLLARAVAHHTDCTFIRVSGSELV 220
Score = 88 (36.0 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYK 503
TEAG++A+R R +VTQEDF AV KV K E + K
Sbjct: 364 TEAGMYALRERRVHVTQEDFEMAVAKVMQ-KDSEKNMSIK 402
Score = 44 (20.5 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 15 QDYRKKLTEHAEVEGRLREMREQLKELTKQ 44
Q+ R+ + E+ ++R +RE+L+ L +Q
Sbjct: 40 QNLRRLQAQRNELNAKVRLLREELQLLQEQ 69
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 580 (209.2 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 110/174 (63%), Positives = 136/174 (78%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ K VIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++V S +
Sbjct: 160 EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 219
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V K+IGE AR++RE+F AR H P IIFMDEID+IG R G+ D E+QRT++ELLNQ
Sbjct: 220 VQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQ 279
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+DGF++ +K+IMATNR D LD ALLRPGR+DRKIE P PNE+ARL+ILKIH+
Sbjct: 280 LDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHS 333
Score = 496 (179.7 bits), Expect = 2.4e-79, Sum P(2) = 2.4e-79
Identities = 101/202 (50%), Positives = 136/202 (67%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH + T+ S +V K+IGE AR++RE+F AR H P IIFMDEID+IG R
Sbjct: 199 LARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 258
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
G+ D E+QRT++ELLNQ+DGF++ +K+IMATNR D LD ALLRPGR+DRKIE P
Sbjct: 259 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 318
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
PNE+ARL + IH+ + I+ + +L +GA+++ VCTEAG++A+R R
Sbjct: 319 PPNEEARLDI---LKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR 375
Query: 436 EYVTQEDFMKAVRKV--SDNKK 455
+VTQEDF AV KV D++K
Sbjct: 376 VHVTQEDFEMAVAKVMQKDSEK 397
Score = 326 (119.8 bits), Expect = 2.4e-79, Sum P(2) = 2.4e-79
Identities = 85/205 (41%), Positives = 116/205 (56%)
Query: 43 KQYDKSENDLKALQS-VGQHDLLLHCVREQLKELTKQYDKSENDLKALQS----VGQVSL 97
+QY S+ ++ LQ V L ++ Q EL + +L+ LQ VG+V
Sbjct: 21 RQYYLSK--IEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVR 78
Query: 98 STSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLV 157
+ K V+VK ++VV + +D + RVAL + T+ + LP +VDPLV
Sbjct: 79 AMDKKK---VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLV 135
Query: 158 YNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTG 217
M E D TY IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTG
Sbjct: 136 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 195
Query: 218 KTLLARAVASQLDANFLKVVSSLFV 242
KTLLARAVA D F++V S V
Sbjct: 196 KTLLARAVAHHTDCTFIRVSGSELV 220
Score = 88 (36.0 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYK 503
TEAG++A+R R +VTQEDF AV KV K E + K
Sbjct: 364 TEAGMYALRERRVHVTQEDFEMAVAKVMQ-KDSEKNMSIK 402
Score = 44 (20.5 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 15 QDYRKKLTEHAEVEGRLREMREQLKELTKQ 44
Q+ R+ + E+ ++R +RE+L+ L +Q
Sbjct: 40 QNLRRLQAQRNELNAKVRLLREELQLLQEQ 69
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 580 (209.2 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 110/174 (63%), Positives = 136/174 (78%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ K VIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++V S +
Sbjct: 160 EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 219
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V K+IGE AR++RE+F AR H P IIFMDEID+IG R G+ D E+QRT++ELLNQ
Sbjct: 220 VQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQ 279
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+DGF++ +K+IMATNR D LD ALLRPGR+DRKIE P PNE+ARL+ILKIH+
Sbjct: 280 LDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHS 333
Score = 496 (179.7 bits), Expect = 2.4e-79, Sum P(2) = 2.4e-79
Identities = 101/202 (50%), Positives = 136/202 (67%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH + T+ S +V K+IGE AR++RE+F AR H P IIFMDEID+IG R
Sbjct: 199 LARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 258
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
G+ D E+QRT++ELLNQ+DGF++ +K+IMATNR D LD ALLRPGR+DRKIE P
Sbjct: 259 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 318
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
PNE+ARL + IH+ + I+ + +L +GA+++ VCTEAG++A+R R
Sbjct: 319 PPNEEARLDI---LKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR 375
Query: 436 EYVTQEDFMKAVRKV--SDNKK 455
+VTQEDF AV KV D++K
Sbjct: 376 VHVTQEDFEMAVAKVMQKDSEK 397
Score = 326 (119.8 bits), Expect = 2.4e-79, Sum P(2) = 2.4e-79
Identities = 85/205 (41%), Positives = 116/205 (56%)
Query: 43 KQYDKSENDLKALQS-VGQHDLLLHCVREQLKELTKQYDKSENDLKALQS----VGQVSL 97
+QY S+ ++ LQ V L ++ Q EL + +L+ LQ VG+V
Sbjct: 21 RQYYLSK--IEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVR 78
Query: 98 STSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLV 157
+ K V+VK ++VV + +D + RVAL + T+ + LP +VDPLV
Sbjct: 79 AMDKKK---VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLV 135
Query: 158 YNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTG 217
M E D TY IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTG
Sbjct: 136 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 195
Query: 218 KTLLARAVASQLDANFLKVVSSLFV 242
KTLLARAVA D F++V S V
Sbjct: 196 KTLLARAVAHHTDCTFIRVSGSELV 220
Score = 88 (36.0 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYK 503
TEAG++A+R R +VTQEDF AV KV K E + K
Sbjct: 364 TEAGMYALRERRVHVTQEDFEMAVAKVMQ-KDSEKNMSIK 402
Score = 44 (20.5 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 15 QDYRKKLTEHAEVEGRLREMREQLKELTKQ 44
Q+ R+ + E+ ++R +RE+L+ L +Q
Sbjct: 40 QNLRRLQAQRNELNAKVRLLREELQLLQEQ 69
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 580 (209.2 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 110/174 (63%), Positives = 136/174 (78%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ K VIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++V S +
Sbjct: 160 EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 219
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V K+IGE AR++RE+F AR H P IIFMDEID+IG R G+ D E+QRT++ELLNQ
Sbjct: 220 VQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQ 279
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+DGF++ +K+IMATNR D LD ALLRPGR+DRKIE P PNE+ARL+ILKIH+
Sbjct: 280 LDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHS 333
Score = 496 (179.7 bits), Expect = 2.4e-79, Sum P(2) = 2.4e-79
Identities = 101/202 (50%), Positives = 136/202 (67%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH + T+ S +V K+IGE AR++RE+F AR H P IIFMDEID+IG R
Sbjct: 199 LARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 258
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
G+ D E+QRT++ELLNQ+DGF++ +K+IMATNR D LD ALLRPGR+DRKIE P
Sbjct: 259 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 318
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
PNE+ARL + IH+ + I+ + +L +GA+++ VCTEAG++A+R R
Sbjct: 319 PPNEEARLDI---LKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR 375
Query: 436 EYVTQEDFMKAVRKV--SDNKK 455
+VTQEDF AV KV D++K
Sbjct: 376 VHVTQEDFEMAVAKVMQKDSEK 397
Score = 326 (119.8 bits), Expect = 2.4e-79, Sum P(2) = 2.4e-79
Identities = 85/205 (41%), Positives = 116/205 (56%)
Query: 43 KQYDKSENDLKALQS-VGQHDLLLHCVREQLKELTKQYDKSENDLKALQS----VGQVSL 97
+QY S+ ++ LQ V L ++ Q EL + +L+ LQ VG+V
Sbjct: 21 RQYYLSK--IEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVR 78
Query: 98 STSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLV 157
+ K V+VK ++VV + +D + RVAL + T+ + LP +VDPLV
Sbjct: 79 AMDKKK---VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLV 135
Query: 158 YNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTG 217
M E D TY IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTG
Sbjct: 136 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 195
Query: 218 KTLLARAVASQLDANFLKVVSSLFV 242
KTLLARAVA D F++V S V
Sbjct: 196 KTLLARAVAHHTDCTFIRVSGSELV 220
Score = 88 (36.0 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYK 503
TEAG++A+R R +VTQEDF AV KV K E + K
Sbjct: 364 TEAGMYALRERRVHVTQEDFEMAVAKVMQ-KDSEKNMSIK 402
Score = 44 (20.5 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 15 QDYRKKLTEHAEVEGRLREMREQLKELTKQ 44
Q+ R+ + E+ ++R +RE+L+ L +Q
Sbjct: 40 QNLRRLQAQRNELNAKVRLLREELQLLQEQ 69
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 580 (209.2 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 110/174 (63%), Positives = 136/174 (78%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ K VIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++V S +
Sbjct: 160 EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 219
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V K+IGE AR++RE+F AR H P IIFMDEID+IG R G+ D E+QRT++ELLNQ
Sbjct: 220 VQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQ 279
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+DGF++ +K+IMATNR D LD ALLRPGR+DRKIE P PNE+ARL+ILKIH+
Sbjct: 280 LDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHS 333
Score = 496 (179.7 bits), Expect = 2.4e-79, Sum P(2) = 2.4e-79
Identities = 101/202 (50%), Positives = 136/202 (67%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH + T+ S +V K+IGE AR++RE+F AR H P IIFMDEID+IG R
Sbjct: 199 LARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 258
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
G+ D E+QRT++ELLNQ+DGF++ +K+IMATNR D LD ALLRPGR+DRKIE P
Sbjct: 259 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 318
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
PNE+ARL + IH+ + I+ + +L +GA+++ VCTEAG++A+R R
Sbjct: 319 PPNEEARLDI---LKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR 375
Query: 436 EYVTQEDFMKAVRKV--SDNKK 455
+VTQEDF AV KV D++K
Sbjct: 376 VHVTQEDFEMAVAKVMQKDSEK 397
Score = 326 (119.8 bits), Expect = 2.4e-79, Sum P(2) = 2.4e-79
Identities = 85/205 (41%), Positives = 116/205 (56%)
Query: 43 KQYDKSENDLKALQS-VGQHDLLLHCVREQLKELTKQYDKSENDLKALQS----VGQVSL 97
+QY S+ ++ LQ V L ++ Q EL + +L+ LQ VG+V
Sbjct: 21 RQYYLSK--IEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVR 78
Query: 98 STSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLV 157
+ K V+VK ++VV + +D + RVAL + T+ + LP +VDPLV
Sbjct: 79 AMDKKK---VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLV 135
Query: 158 YNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTG 217
M E D TY IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTG
Sbjct: 136 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 195
Query: 218 KTLLARAVASQLDANFLKVVSSLFV 242
KTLLARAVA D F++V S V
Sbjct: 196 KTLLARAVAHHTDCTFIRVSGSELV 220
Score = 88 (36.0 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYK 503
TEAG++A+R R +VTQEDF AV KV K E + K
Sbjct: 364 TEAGMYALRERRVHVTQEDFEMAVAKVMQ-KDSEKNMSIK 402
Score = 44 (20.5 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 15 QDYRKKLTEHAEVEGRLREMREQLKELTKQ 44
Q+ R+ + E+ ++R +RE+L+ L +Q
Sbjct: 40 QNLRRLQAQRNELNAKVRLLREELQLLQEQ 69
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 110/179 (61%), Positives = 142/179 (79%)
Query: 496 LESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 554
LE ++ + + V+ELPL +PELF++VGI PPKG LLYGPPGTGKTLLA+AVA++ +A F++
Sbjct: 175 LEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIR 234
Query: 555 VVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 614
VV S +V K+IGE A L++++F A+ P IIF+DEIDAI +R T DRE+QRTL
Sbjct: 235 VVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTL 294
Query: 615 MELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
M+LL +MDGFD+ G VK+I ATNRPD LDPA+LRPGR DR IE+P P+E+ RLEILKIH
Sbjct: 295 MQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIH 353
Score = 473 (171.6 bits), Expect = 2.5e-79, Sum P(2) = 2.5e-79
Identities = 93/190 (48%), Positives = 130/190 (68%)
Query: 267 TYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI 326
T+ S +V K+IGE A L++++F A+ P IIF+DEIDAI +R T DRE+
Sbjct: 231 TFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREV 290
Query: 327 QRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHT 386
QRTLM+LL +MDGFD+ G VK+I ATNRPD LDPA+LRPGR DR IE+P P+E+ RL
Sbjct: 291 QRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEI- 349
Query: 387 WPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKA 446
+ IH + +++ E + K+++ GA+L+ +CTEAG+ AIR R+YVT +DF KA
Sbjct: 350 --LKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKA 407
Query: 447 VRKVSDNKKL 456
V K+ + KK+
Sbjct: 408 VEKIMEKKKV 417
Score = 352 (129.0 bits), Expect = 2.5e-79, Sum P(2) = 2.5e-79
Identities = 88/242 (36%), Positives = 139/242 (57%)
Query: 5 VVDEVRHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQS-VGQHDL 63
V +E L+ +K TE + E + + +L K+ + + + L+S + + +L
Sbjct: 2 VFEEFISTELKKEKKAFTEEFKEEKEINDNSNLKNDLLKEELQEKARIAELESRILKLEL 61
Query: 64 -LLHCVREQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKCWT--VIVKATNGPRYVVG 120
RE L +L K+ + +L ++ V + + T V K V+VK++ GP ++V
Sbjct: 62 EKKELERENL-QLMKENEILRRELDRMR-VPPLIVGTVVDKVGERKVVVKSSTGPSFLVN 119
Query: 121 CRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQI 180
++ L G RV L+ TLT++ LP D M ++ ++ Y IGGL +Q+
Sbjct: 120 VSHFVNPDDLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVDERPNVRYEDIGGLEKQM 179
Query: 181 RELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSL 240
+E+REV+ELPL +PELF++VGI PPKG LLYGPPGTGKTLLA+AVA++ +A F++VV S
Sbjct: 180 QEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSE 239
Query: 241 FV 242
V
Sbjct: 240 LV 241
Score = 103 (41.3 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 22/72 (30%), Positives = 42/72 (58%)
Query: 428 LFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAV 487
+ I + + + ++ ++ + K+++ + TEAG+ AIR R+YVT +DF KAV
Sbjct: 349 ILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAV 408
Query: 488 RKVSDNKKLESK 499
K+ + KK++ K
Sbjct: 409 EKIMEKKKVKVK 420
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 108/181 (59%), Positives = 140/181 (77%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+E PLL+PE F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S +V
Sbjct: 51 REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 110
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE AR++RE+F AR + C+IF DEIDAIGG RF +G D E+QRT++EL+NQ+D
Sbjct: 111 KYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLD 170
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
GFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP+ + R I KIHA ++ +
Sbjct: 171 GFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERD 230
Query: 683 I 683
I
Sbjct: 231 I 231
Score = 521 (188.5 bits), Expect = 5.4e-79, Sum P(2) = 5.4e-79
Identities = 97/193 (50%), Positives = 137/193 (70%)
Query: 258 RRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 317
R + + + S +V KY+GE AR++RE+F AR + C+IF DEIDAIGG RF
Sbjct: 90 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFD 149
Query: 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLP 377
+G D E+QRT++EL+NQ+DGFD G +K++MATNRPDTLDPAL+RPGRLDRKIE LP
Sbjct: 150 DGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 209
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY 437
+ + R H + IHA ++ +I +E + +L + GA++R+VCTEAG+FAIR+ R+
Sbjct: 210 DLEGR-THIF--KIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 266
Query: 438 VTQEDFMKAVRKV 450
T++DF++AV KV
Sbjct: 267 ATEKDFLEAVNKV 279
Score = 292 (107.8 bits), Expect = 5.4e-79, Sum P(2) = 5.4e-79
Identities = 59/108 (54%), Positives = 75/108 (69%)
Query: 135 RVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNP 194
RV +D I LP ++DP V M E+ D+TYS +GG EQI +LREV+E PLL+P
Sbjct: 2 RVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHP 61
Query: 195 ELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
E F +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S V
Sbjct: 62 ERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELV 109
Score = 93 (37.8 bits), Expect = 5.7e-32, Sum P(2) = 5.7e-32
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 428 LFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAV 487
+F I + V ++ + + ++ N S TEAG+FAIR+ R+ T++DF++AV
Sbjct: 217 IFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAV 276
Query: 488 RKV 490
KV
Sbjct: 277 NKV 279
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 569 (205.4 bits), Expect = 1.1e-78, Sum P(2) = 1.1e-78
Identities = 149/379 (39%), Positives = 208/379 (54%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
I+ K+ GE+ +R++F A P IIF+DE+DA+ +R EG + E +R + LL
Sbjct: 417 IISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQNEVE-KRVVASLLT 473
Query: 336 QMDGFDSLG---QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIH 392
MDG S G QV ++ ATNRP LD AL RPGR D++IEI +PN Q RL +
Sbjct: 474 LMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRR 533
Query: 393 AGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE-REYVTQEDFMKA-VRKV 450
+ E+ + + + GADL+ +C EAGL+A+R R+ D A + K+
Sbjct: 534 VPHLLTEAEL--LQLANSAHGYVGADLKALCNEAGLYALRRVLRKQPNLPDSKVAGLVKI 591
Query: 451 SDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLES-KLDYKPVIELP 509
+ L N R A RE D SD LE+ KL K +E P
Sbjct: 592 TLKDFLQGMNDIRPSA-------MREVAI--DVPNV--SWSDIGGLENIKLKLKQAVEWP 640
Query: 510 LLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESA 569
L +PE F ++GI PPKG LLYGPPG KT++A+A+A++ NFL + +++KY+GES
Sbjct: 641 LKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESE 700
Query: 570 RLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQ 629
R +RE+F AR P IIF DE+DA+ R S + A R L +LL +MDG + L
Sbjct: 701 RAVREIFRKARAVAPSIIFFDELDALAVERGSS-SGAGNVADRVLAQLLTEMDGIEQLKD 759
Query: 630 VKMIMATNRPDTLDPALLR 648
V ++ ATNRPD +D LLR
Sbjct: 760 VTILAATNRPDRIDKELLR 778
Score = 395 (144.1 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 88/181 (48%), Positives = 124/181 (68%)
Query: 496 LESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 554
L S+L + + +IELPL PELF+ GI+PP+G LLYGPPGTGKT++ARAVA+++ A ++
Sbjct: 352 LNSQLKEIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVANEVGA-YVS 410
Query: 555 VVSSA-IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRT 613
V++ I+ K+ GE+ +R++F A P IIF+DE+DA+ +R EG + E +R
Sbjct: 411 VINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQNEVE-KRV 467
Query: 614 LMELLNQMDGFDSLG---QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEIL 670
+ LL MDG S G QV ++ ATNRP LD AL RPGR D++IEI +PN Q RL+IL
Sbjct: 468 VASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDIL 527
Query: 671 K 671
+
Sbjct: 528 Q 528
Score = 241 (89.9 bits), Expect = 1.1e-78, Sum P(2) = 1.1e-78
Identities = 44/78 (56%), Positives = 63/78 (80%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+TY IGGL+ Q++E+RE+IELPL PELF+ GI+PP+G LLYGPPGTGKT++ARAVA+
Sbjct: 344 VTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVAN 403
Query: 228 QLDANFLKVVSSLFVTSK 245
++ A ++ V++ + SK
Sbjct: 404 EVGA-YVSVINGPEIISK 420
Score = 192 (72.6 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 45/118 (38%), Positives = 72/118 (61%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTIMRYLP--REVDPLVYNMSHEDPGDITYSAIGGLSEQ 179
RR L K ++VA + +T+ +L ++ P D ++++S IGGL E
Sbjct: 571 RRVLRKQPNLPDSKVA-GLVKITLKDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGL-EN 628
Query: 180 IR-ELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
I+ +L++ +E PL +PE F ++GI PPKG LLYGPPG KT++A+A+A++ NFL +
Sbjct: 629 IKLKLKQAVEWPLKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAI 686
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 100/172 (58%), Positives = 135/172 (78%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+E+PLL PE F +GI PPKG LLYGPPGTGKTL ARA+A++ DA F+ V+ S +V
Sbjct: 175 REVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSELVQ 234
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE AR++RE+F A++ + CI+F+DE+DAIGG R E D E+QRT++E++NQ+D
Sbjct: 235 KYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLD 294
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
GFD+ G +K++MATNRPDTLD AL+RPGR+DR+IE LP+ + R I KIHA
Sbjct: 295 GFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEGRTHIFKIHA 346
Score = 483 (175.1 bits), Expect = 1.6e-78, Sum P(2) = 1.6e-78
Identities = 89/199 (44%), Positives = 138/199 (69%)
Query: 253 GNQLKRRS-THHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI 311
G L R+ + + + S +V KY+GE AR++RE+F A++ + CI+F+DE+DAI
Sbjct: 208 GKTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAI 267
Query: 312 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 371
GG R E D E+QRT++E++NQ+DGFD+ G +K++MATNRPDTLD AL+RPGR+DR+
Sbjct: 268 GGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRR 327
Query: 372 IEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI 431
IE LP+ + R H + IHA + ++ +E + +L + G+D+R+VCTEAG+FAI
Sbjct: 328 IEFSLPDLEGR-THIF--KIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAI 384
Query: 432 RSEREYVTQEDFMKAVRKV 450
R+ R+ +T++D + A+ KV
Sbjct: 385 RARRKTITEKDLLLAINKV 403
Score = 333 (122.3 bits), Expect = 1.6e-78, Sum P(2) = 1.6e-78
Identities = 78/193 (40%), Positives = 112/193 (58%)
Query: 51 DLKALQSVGQHDLLLHCVREQLK-ELTKQYDKSENDLKALQSVGQVSLSTSVSKCWTVIV 109
++ L V + D L C+ Q +L KQ E L+ + ++ T +K I+
Sbjct: 45 NINKLCGVRESDTGL-CLPNQWDLQLDKQMLNEEQPLQVARCTKIINADTDQTK---YII 100
Query: 110 KATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDIT 169
++VVG ++ + ++ G RV +D T I LP ++DP V M+ E+ DIT
Sbjct: 101 NVKQIAKFVVGLGDKVAPSDIEEGMRVGVDRTKYKIQILLPPKIDPSVTMMTVEEKPDIT 160
Query: 170 YSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL 229
Y+ IGG EQ+ +LREV+E+PLL PE F +GI PPKG LLYGPPGTGKTL ARA+A++
Sbjct: 161 YNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRT 220
Query: 230 DANFLKVVSSLFV 242
DA F+ V+ S V
Sbjct: 221 DACFICVIGSELV 233
Score = 85 (35.0 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 428 LFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAV 487
+F I + ++++ + + ++ N S TEAG+FAIR+ R+ +T++D + A+
Sbjct: 341 IFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEKDLLLAI 400
Query: 488 RKV 490
KV
Sbjct: 401 NKV 403
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 100/172 (58%), Positives = 135/172 (78%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+E+PLL PE F +GI PPKG LLYGPPGTGKTL ARA+A++ DA F+ V+ S +V
Sbjct: 175 REVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSELVQ 234
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE AR++RE+F A++ + CI+F+DE+DAIGG R E D E+QRT++E++NQ+D
Sbjct: 235 KYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLD 294
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
GFD+ G +K++MATNRPDTLD AL+RPGR+DR+IE LP+ + R I KIHA
Sbjct: 295 GFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEGRTHIFKIHA 346
Score = 483 (175.1 bits), Expect = 1.6e-78, Sum P(2) = 1.6e-78
Identities = 89/199 (44%), Positives = 138/199 (69%)
Query: 253 GNQLKRRS-THHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI 311
G L R+ + + + S +V KY+GE AR++RE+F A++ + CI+F+DE+DAI
Sbjct: 208 GKTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAI 267
Query: 312 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 371
GG R E D E+QRT++E++NQ+DGFD+ G +K++MATNRPDTLD AL+RPGR+DR+
Sbjct: 268 GGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRR 327
Query: 372 IEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI 431
IE LP+ + R H + IHA + ++ +E + +L + G+D+R+VCTEAG+FAI
Sbjct: 328 IEFSLPDLEGR-THIF--KIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAI 384
Query: 432 RSEREYVTQEDFMKAVRKV 450
R+ R+ +T++D + A+ KV
Sbjct: 385 RARRKTITEKDLLLAINKV 403
Score = 333 (122.3 bits), Expect = 1.6e-78, Sum P(2) = 1.6e-78
Identities = 78/193 (40%), Positives = 112/193 (58%)
Query: 51 DLKALQSVGQHDLLLHCVREQLK-ELTKQYDKSENDLKALQSVGQVSLSTSVSKCWTVIV 109
++ L V + D L C+ Q +L KQ E L+ + ++ T +K I+
Sbjct: 45 NINKLCGVRESDTGL-CLPNQWDLQLDKQMLNEEQPLQVARCTKIINADTDQTK---YII 100
Query: 110 KATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDIT 169
++VVG ++ + ++ G RV +D T I LP ++DP V M+ E+ DIT
Sbjct: 101 NVKQIAKFVVGLGDKVAPSDIEEGMRVGVDRTKYKIQILLPPKIDPSVTMMTVEEKPDIT 160
Query: 170 YSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL 229
Y+ IGG EQ+ +LREV+E+PLL PE F +GI PPKG LLYGPPGTGKTL ARA+A++
Sbjct: 161 YNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRT 220
Query: 230 DANFLKVVSSLFV 242
DA F+ V+ S V
Sbjct: 221 DACFICVIGSELV 233
Score = 85 (35.0 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 428 LFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAV 487
+F I + ++++ + + ++ N S TEAG+FAIR+ R+ +T++D + A+
Sbjct: 341 IFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEKDLLLAI 400
Query: 488 RKV 490
KV
Sbjct: 401 NKV 403
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 110/174 (63%), Positives = 136/174 (78%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ K VIELP+ +PE+F+ +GI+ PKG LLYGPPGTGKTLLARAVA D F++V S +
Sbjct: 190 EVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 249
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V KYIGE +R++RE+F AR H P IIFMDEID+IG +R EG D E+QRT+MELLNQ
Sbjct: 250 VQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRI-EGEHGDSEVQRTMMELLNQ 308
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+DGF+S +K+IM TNR D LD ALLRPGR+DRKIE P PN +AR+EILKIH+
Sbjct: 309 LDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARMEILKIHS 362
Score = 482 (174.7 bits), Expect = 1.7e-78, Sum P(2) = 1.7e-78
Identities = 100/195 (51%), Positives = 131/195 (67%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH + T+ S +V KYIGE +R++RE+F AR H P IIFMDEID+IG +R
Sbjct: 229 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQR 288
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
EG D E+QRT+MELLNQ+DGF+S +K+IM TNR D LD ALLRPGR+DRKIE P
Sbjct: 289 I-EGEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFP 347
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
PN +AR+ + IH+ + ID + ++ +GA+++ VCTEAG+FA+R R
Sbjct: 348 NPNVEARMEI---LKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRERR 404
Query: 436 EYVTQEDFMKAVRKV 450
+VTQEDF AV KV
Sbjct: 405 VHVTQEDFEMAVAKV 419
Score = 334 (122.6 bits), Expect = 1.7e-78, Sum P(2) = 1.7e-78
Identities = 86/241 (35%), Positives = 132/241 (54%)
Query: 5 VVDEVRHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYD--KSENDLKALQSVGQHD 62
+ +E+ K +++ ++ + L E EQ++ K+Y K E + Q+
Sbjct: 17 IKNEISEKNMENNNNN--DNNKNSSALNE--EQVQSGIKRYYELKIEEYESIINKKLQNK 72
Query: 63 LLLHCVREQLKELTKQY-DKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGC 121
L R +L ++ D+ + L+A VG++ +K V+VK +YVV
Sbjct: 73 KRLEAQRNELNARVRELCDEIQYLLEAASYVGEIVKPMGKNK---VLVKINPEGKYVVDI 129
Query: 122 RRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIR 181
R ++ + TRVAL + + + LP +VDPLV M E D TY +GGL +Q++
Sbjct: 130 ARHINISHCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVK 189
Query: 182 ELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLF 241
E++EVIELP+ +PE+F+ +GI+ PKG LLYGPPGTGKTLLARAVA D F++V S
Sbjct: 190 EVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 249
Query: 242 V 242
V
Sbjct: 250 V 250
Score = 88 (36.0 bits), Expect = 5.2e-36, Sum P(2) = 5.2e-36
Identities = 18/27 (66%), Positives = 21/27 (77%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKV 490
TEAG+FA+R R +VTQEDF AV KV
Sbjct: 393 TEAGMFALRERRVHVTQEDFEMAVAKV 419
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 110/174 (63%), Positives = 136/174 (78%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ K VIELP+ +PE+F+ +GI+ PKG LLYGPPGTGKTLLARAVA D F++V S +
Sbjct: 190 EVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 249
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V KYIGE +R++RE+F AR H P IIFMDEID+IG +R EG D E+QRT+MELLNQ
Sbjct: 250 VQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRI-EGEHGDSEVQRTMMELLNQ 308
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+DGF+S +K+IM TNR D LD ALLRPGR+DRKIE P PN +AR+EILKIH+
Sbjct: 309 LDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARMEILKIHS 362
Score = 482 (174.7 bits), Expect = 1.7e-78, Sum P(2) = 1.7e-78
Identities = 100/195 (51%), Positives = 131/195 (67%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH + T+ S +V KYIGE +R++RE+F AR H P IIFMDEID+IG +R
Sbjct: 229 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQR 288
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
EG D E+QRT+MELLNQ+DGF+S +K+IM TNR D LD ALLRPGR+DRKIE P
Sbjct: 289 I-EGEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFP 347
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
PN +AR+ + IH+ + ID + ++ +GA+++ VCTEAG+FA+R R
Sbjct: 348 NPNVEARMEI---LKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRERR 404
Query: 436 EYVTQEDFMKAVRKV 450
+VTQEDF AV KV
Sbjct: 405 VHVTQEDFEMAVAKV 419
Score = 334 (122.6 bits), Expect = 1.7e-78, Sum P(2) = 1.7e-78
Identities = 86/241 (35%), Positives = 132/241 (54%)
Query: 5 VVDEVRHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYD--KSENDLKALQSVGQHD 62
+ +E+ K +++ ++ + L E EQ++ K+Y K E + Q+
Sbjct: 17 IKNEISEKNMENNNNN--DNNKNSSALNE--EQVQSGIKRYYELKIEEYESIINKKLQNK 72
Query: 63 LLLHCVREQLKELTKQY-DKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGC 121
L R +L ++ D+ + L+A VG++ +K V+VK +YVV
Sbjct: 73 KRLEAQRNELNARVRELCDEIQYLLEAASYVGEIVKPMGKNK---VLVKINPEGKYVVDI 129
Query: 122 RRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIR 181
R ++ + TRVAL + + + LP +VDPLV M E D TY +GGL +Q++
Sbjct: 130 ARHINISHCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVK 189
Query: 182 ELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLF 241
E++EVIELP+ +PE+F+ +GI+ PKG LLYGPPGTGKTLLARAVA D F++V S
Sbjct: 190 EVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 249
Query: 242 V 242
V
Sbjct: 250 V 250
Score = 88 (36.0 bits), Expect = 5.2e-36, Sum P(2) = 5.2e-36
Identities = 18/27 (66%), Positives = 21/27 (77%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKV 490
TEAG+FA+R R +VTQEDF AV KV
Sbjct: 393 TEAGMFALRERRVHVTQEDFEMAVAKV 419
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 557 (201.1 bits), Expect = 6.9e-57, Sum P(2) = 6.9e-57
Identities = 107/180 (59%), Positives = 137/180 (76%)
Query: 496 LESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 554
L++++ + K VIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA + F++
Sbjct: 180 LDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIR 239
Query: 555 VVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 614
V S +V K+IGE AR++RE+F AR H P IIFMDEID+IG R D E+QRT+
Sbjct: 240 VSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQRTM 299
Query: 615 MELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+ELLNQ+DGF++ +K+IMATNR D LD ALLRPGR+DRKIE P P+E+AR +ILKIH+
Sbjct: 300 LELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKARAQILKIHS 359
Score = 477 (173.0 bits), Expect = 4.1e-78, Sum P(2) = 4.1e-78
Identities = 100/202 (49%), Positives = 134/202 (66%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH E T+ S +V K+IGE AR++RE+F AR H P IIFMDEID+IG R
Sbjct: 225 LARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 284
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
D E+QRT++ELLNQ+DGF++ +K+IMATNR D LD ALLRPGR+DRKIE P
Sbjct: 285 VEGSRGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 344
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
P+E+AR A + IH+ + I + + + +GA++++VCTEAG+FA+R R
Sbjct: 345 APDEKAR-AQI--LKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRERR 401
Query: 436 EYVTQEDFMKAVRKV--SDNKK 455
+VTQEDF AV KV D++K
Sbjct: 402 IHVTQEDFEMAVGKVMQKDSEK 423
Score = 336 (123.3 bits), Expect = 4.1e-78, Sum P(2) = 4.1e-78
Identities = 83/208 (39%), Positives = 118/208 (56%)
Query: 39 KELTKQYDKSENDLKALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQS----VGQ 94
++ + Y K++ + +A Q+V + + + + Q KEL + + ++ L VG+
Sbjct: 43 EQTLRPYFKTKVE-QAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGE 101
Query: 95 VSLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVD 154
V + K V+VK +Y+V +D + L +GTRVAL I LP +VD
Sbjct: 102 VCKAMDKKK---VLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVD 158
Query: 155 PLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPP 214
PLV M E D TY +GGL QI+E++EVIELP+ +PELF +GI PKG LLYGPP
Sbjct: 159 PLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 218
Query: 215 GTGKTLLARAVASQLDANFLKVVSSLFV 242
GTGKTLLARAVA + F++V S V
Sbjct: 219 GTGKTLLARAVAHHTECTFIRVSGSELV 246
Score = 89 (36.4 bits), Expect = 2.5e-36, Sum P(2) = 2.5e-36
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYK 503
TEAG+FA+R R +VTQEDF AV KV K E + K
Sbjct: 390 TEAGMFALRERRIHVTQEDFEMAVGKVMQ-KDSEKNMSIK 428
Score = 46 (21.3 bits), Expect = 6.9e-57, Sum P(2) = 6.9e-57
Identities = 23/98 (23%), Positives = 42/98 (42%)
Query: 12 KTLQDYRKKLTEHAE--VEGR---LREMREQLKELTKQYDKSENDLKALQSVGQHDLLLH 66
+TL+ Y K E AE V + +R + Q KEL + + ++ L G H +
Sbjct: 44 QTLRPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVC 103
Query: 67 CVREQLKELTKQYDKSEN--DLKALQSVGQVSLSTSVS 102
++ K L K + + D+ A + ++ T V+
Sbjct: 104 KAMDKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVA 141
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 571 (206.1 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
Identities = 112/181 (61%), Positives = 140/181 (77%)
Query: 496 LESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 554
LE ++ + K VIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++
Sbjct: 150 LEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIR 209
Query: 555 VVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRF-SEGTSADREIQRT 613
V S +V KYIGE +R++RE+F AR H P IIFMDEID+IG R S G S D E+QRT
Sbjct: 210 VSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRT 269
Query: 614 LMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
++ELLNQ+DGF++ +K+IMATNR D LDPALLRPGR+DRKIE P P+ +AR EIL+IH
Sbjct: 270 MLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIH 329
Query: 674 A 674
+
Sbjct: 330 S 330
Score = 487 (176.5 bits), Expect = 4.8e-78, Sum P(2) = 4.8e-78
Identities = 101/196 (51%), Positives = 134/196 (68%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH + + S +V KYIGE +R++RE+F AR H P IIFMDEID+IG R
Sbjct: 195 LARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSR 254
Query: 316 F-SEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEI 374
S G S D E+QRT++ELLNQ+DGF++ +K+IMATNR D LDPALLRPGR+DRKIE
Sbjct: 255 SDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEF 314
Query: 375 PLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE 434
P P+ +AR A + IH+ + ID +++ + + +GA+L+ VCTEAG+FA+R
Sbjct: 315 PPPSAEAR-AEI--LRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRER 371
Query: 435 REYVTQEDFMKAVRKV 450
R +VTQEDF AV KV
Sbjct: 372 RVHVTQEDFELAVAKV 387
Score = 324 (119.1 bits), Expect = 4.8e-78, Sum P(2) = 4.8e-78
Identities = 72/151 (47%), Positives = 96/151 (63%)
Query: 92 VGQVSLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPR 151
VG+V + +K V+VK +YVV +D ++K RVAL + +++ LP
Sbjct: 69 VGEVIKTMGKNK---VLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPN 125
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
+VDPLV M E D TY +GGL +QI+E++EVIELP+ +PELF+ +GI PKG LLY
Sbjct: 126 KVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLY 185
Query: 212 GPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
GPPGTGKTLLARAVA D F++V S V
Sbjct: 186 GPPGTGKTLLARAVAHHTDCKFIRVSGSELV 216
Score = 89 (36.4 bits), Expect = 5.0e-35, Sum P(2) = 5.0e-35
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 426 AGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
A + I S +T+ +K++ + + TEAG+FA+R R +VTQEDF
Sbjct: 323 AEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDFEL 382
Query: 486 AVRKV 490
AV KV
Sbjct: 383 AVAKV 387
Score = 38 (18.4 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 175 GLSEQIRELREVIEL 189
GL+ ++R LRE I+L
Sbjct: 47 GLNARVRLLREEIQL 61
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 105/181 (58%), Positives = 140/181 (77%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ V+E+PLL+PE F +GI PPKG LLYGPPGTGKTL ARAVA++ DA F++V+ S +V
Sbjct: 198 REVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQ 257
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
KY+GE AR++RE+F AR + CIIF DEIDA+GG RF +G D E+QRT++EL+ Q+D
Sbjct: 258 KYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLD 317
Query: 623 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGE 682
GFD+ G +K++ ATNRP TLDPAL+RPGR+DRKIE LP+ + R IL+IHA ++ +
Sbjct: 318 GFDARGNIKVMFATNRPSTLDPALMRPGRIDRKIEFSLPDVEGRANILRIHAKSMSVERD 377
Query: 683 I 683
I
Sbjct: 378 I 378
Score = 500 (181.1 bits), Expect = 4.8e-78, Sum P(2) = 4.8e-78
Identities = 97/206 (47%), Positives = 140/206 (67%)
Query: 258 RRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS 317
R + + T+ S +V KY+GE AR++RE+F AR + CIIF DEIDA+GG RF
Sbjct: 237 RAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFD 296
Query: 318 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLP 377
+G D E+QRT++EL+ Q+DGFD+ G +K++ ATNRP TLDPAL+RPGR+DRKIE LP
Sbjct: 297 DGAGGDNEVQRTMLELITQLDGFDARGNIKVMFATNRPSTLDPALMRPGRIDRKIEFSLP 356
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY 437
+ + R A+ + IHA ++ +I +E + +L + GA+LR+V TEAG+FAIR+ R+
Sbjct: 357 DVEGR-ANI--LRIHAKSMSVERDIRWELISRLCPNATGAELRSVATEAGMFAIRARRKV 413
Query: 438 VTQEDFMKAVRKV-SDNKKLDHCNSY 462
T++DF+ AV KV N K + +Y
Sbjct: 414 ATEKDFLAAVDKVIKGNLKFNSTATY 439
Score = 309 (113.8 bits), Expect = 4.8e-78, Sum P(2) = 4.8e-78
Identities = 60/108 (55%), Positives = 78/108 (72%)
Query: 135 RVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNP 194
R+++D IM LP ++DP V M+ ED D+TY +GG EQI +LREV+E+PLL+P
Sbjct: 149 RLSVDRNKYQIMLPLPPKIDPSVTMMTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLLSP 208
Query: 195 ELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
E F +GI PPKG LLYGPPGTGKTL ARAVA++ DA F++V+ S V
Sbjct: 209 ERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELV 256
Score = 98 (39.6 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
Identities = 27/85 (31%), Positives = 43/85 (50%)
Query: 419 LRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYV 478
L +V A + I ++ V ++ + + ++ N S TEAG+FAIR+ R+
Sbjct: 355 LPDVEGRANILRIHAKSMSVERDIRWELISRLCPNATGAELRSVATEAGMFAIRARRKVA 414
Query: 479 TQEDFMKAVRKV-SDNKKLESKLDY 502
T++DF+ AV KV N K S Y
Sbjct: 415 TEKDFLAAVDKVIKGNLKFNSTATY 439
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 565 (203.9 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
Identities = 109/174 (62%), Positives = 135/174 (77%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ K VIELP+ +PE F+ +GI PKG LLYGPPGTGKTLLARAVA D F++V S +
Sbjct: 155 EIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 214
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V K+IGE AR++RE+F AR H P IIFMDEID+IG R G+ D E+QRT++ELLNQ
Sbjct: 215 VQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSR-LEGGSGGDSEVQRTMLELLNQ 273
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+DGF++ +K+IMATNR D LD ALLRPGR+DRKIE P PNE+ARL+ILKIH+
Sbjct: 274 LDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHS 327
Score = 488 (176.8 bits), Expect = 7.6e-78, Sum P(2) = 7.6e-78
Identities = 101/202 (50%), Positives = 136/202 (67%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH + T+ S +V K+IGE AR++RE+F AR H P IIFMDEID+IG R
Sbjct: 194 LARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSR- 252
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
G+ D E+QRT++ELLNQ+DGF++ +K+IMATNR D LD ALLRPGR+DRKIE P
Sbjct: 253 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 312
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
PNE+ARL + IH+ + I+ + +L +GA+++ VCTEAG++A+R R
Sbjct: 313 PPNEEARLDI---LKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR 369
Query: 436 EYVTQEDFMKAVRKV--SDNKK 455
+VTQEDF AV KV D++K
Sbjct: 370 VHVTQEDFEMAVAKVMQKDSEK 391
Score = 321 (118.1 bits), Expect = 7.6e-78, Sum P(2) = 7.6e-78
Identities = 84/205 (40%), Positives = 115/205 (56%)
Query: 43 KQYDKSE-NDLKALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQS----VGQVSL 97
+QY S+ DL+ + V L ++ Q EL + +L+ LQ VG+V
Sbjct: 16 RQYYLSKIEDLQLV--VNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVR 73
Query: 98 STSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLV 157
+ K V+VK ++VV + +D + RVAL + T+ + LP +VDPLV
Sbjct: 74 AMDKKK---VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLV 130
Query: 158 YNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTG 217
M E D TY IGGL +QI+E++EVIELP+ +PE F+ +GI PKG LLYGPPGTG
Sbjct: 131 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTG 190
Query: 218 KTLLARAVASQLDANFLKVVSSLFV 242
KTLLARAVA D F++V S V
Sbjct: 191 KTLLARAVAHHTDCTFIRVSGSELV 215
Score = 91 (37.1 bits), Expect = 3.8e-32, Sum P(2) = 3.8e-32
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKV--SDNKK-LESKLDYKPVIELPLL 511
TEAG++A+R R +VTQEDF AV KV D++K + K +K +P+L
Sbjct: 358 TEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWKCFFLVPIL 408
Score = 44 (20.5 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 15 QDYRKKLTEHAEVEGRLREMREQLKELTKQ 44
Q+ R+ + E+ ++R +RE+L+ L +Q
Sbjct: 35 QNLRRLQAQRNELNAKVRLLREELQLLQEQ 64
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 561 (202.5 bits), Expect = 1.2e-77, Sum P(2) = 1.2e-77
Identities = 145/374 (38%), Positives = 204/374 (54%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
I+ K+ GE+ +R++F A P IIF+DE+DA+ +R EG + E +R + LL
Sbjct: 414 IISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQNEVE-KRVVASLLT 470
Query: 336 QMDGFDSLG---QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIH 392
MDG S G QV ++ ATNRP LD AL RPGR D++IEI +PN Q RL +
Sbjct: 471 LMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRR 530
Query: 393 AGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRS--EREYVTQEDFMKAVRKV 450
+ E+ + + + GADL+ +C EAGL A+R R+ + M + K+
Sbjct: 531 VPHLLTEAEL--LQLANSAHGYVGADLKALCNEAGLHALRRVLRRQPNLPDSKMAGLVKI 588
Query: 451 SDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLES-KLDYKPVIELP 509
+ L N R A RE D SD LE+ KL K +E P
Sbjct: 589 TLKDFLQGMNDIRPSA-------MREVAV--DVPNV--SWSDIGGLENVKLKLKQAVEWP 637
Query: 510 LLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESA 569
L +PE F ++GI PPKG LLYGPPG KT++A+A+A++ NFL + +++KY+GES
Sbjct: 638 LKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESE 697
Query: 570 RLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQ 629
R +RE+F AR P IIF DE+DA+ R S + A R L +LL +MDG + L
Sbjct: 698 RAVREIFRKARAVAPSIIFFDELDALAVERGSS-SGAGNVADRVLAQLLTEMDGIEQLKN 756
Query: 630 VKMIMATNRPDTLD 643
V ++ ATNRPD +D
Sbjct: 757 VTILAATNRPDRID 770
Score = 393 (143.4 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 88/181 (48%), Positives = 123/181 (67%)
Query: 496 LESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 554
L S+L + + +IELPL PELF+ GI PP+G LLYGPPGTGKT++ARAVA+++ A ++
Sbjct: 349 LNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANEVGA-YVS 407
Query: 555 VVSSA-IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRT 613
V++ I+ K+ GE+ +R++F A P IIF+DE+DA+ +R EG + E +R
Sbjct: 408 VINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQNEVE-KRV 464
Query: 614 LMELLNQMDGFDSLG---QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEIL 670
+ LL MDG S G QV ++ ATNRP LD AL RPGR D++IEI +PN Q RL+IL
Sbjct: 465 VASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDIL 524
Query: 671 K 671
+
Sbjct: 525 Q 525
Score = 239 (89.2 bits), Expect = 1.2e-77, Sum P(2) = 1.2e-77
Identities = 44/78 (56%), Positives = 62/78 (79%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+TY IGGL+ Q++E+RE+IELPL PELF+ GI PP+G LLYGPPGTGKT++ARAVA+
Sbjct: 341 VTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVAN 400
Query: 228 QLDANFLKVVSSLFVTSK 245
++ A ++ V++ + SK
Sbjct: 401 EVGA-YVSVINGPEIISK 417
Score = 187 (70.9 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 41/117 (35%), Positives = 69/117 (58%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTIMRYLP--REVDPLVYNMSHEDPGDITYSAIGGLSEQ 179
RR L + +++A + +T+ +L ++ P D ++++S IGGL
Sbjct: 568 RRVLRRQPNLPDSKMA-GLVKITLKDFLQGMNDIRPSAMREVAVDVPNVSWSDIGGLENV 626
Query: 180 IRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
+L++ +E PL +PE F ++GI PPKG LLYGPPG KT++A+A+A++ NFL +
Sbjct: 627 KLKLKQAVEWPLKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAI 683
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 110/174 (63%), Positives = 136/174 (78%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ K VIELP+ +PELF +GIT PKG LLYGPPGTGKTLLARAVA + F++V S +
Sbjct: 154 EIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSEL 213
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V K+IGE +R++RE+F AR H P IIFMDEID+IG R GT D E+QRT++ELLNQ
Sbjct: 214 VQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGTG-DSEVQRTMLELLNQ 272
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+DGF++ +K+IMATNR D LD ALLRPGR+DRKIE P PNE+ARL+ILKIH+
Sbjct: 273 LDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHS 326
Score = 486 (176.1 bits), Expect = 1.7e-77, Sum P(2) = 1.7e-77
Identities = 101/202 (50%), Positives = 135/202 (66%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH E T+ S +V K+IGE +R++RE+F AR H P IIFMDEID+IG R
Sbjct: 193 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSAR 252
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
GT D E+QRT++ELLNQ+DGF++ +K+IMATNR D LD ALLRPGR+DRKIE P
Sbjct: 253 LETGTG-DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFP 311
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
PNE+ARL + IH+ + I+ + + +GA+++ VCTEAG++A+R R
Sbjct: 312 PPNEEARLDI---LKIHSRKMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRERR 368
Query: 436 EYVTQEDFMKAVRKV--SDNKK 455
+VTQEDF AV KV D++K
Sbjct: 369 VHVTQEDFEMAVSKVMMKDSEK 390
Score = 320 (117.7 bits), Expect = 1.7e-77, Sum P(2) = 1.7e-77
Identities = 80/200 (40%), Positives = 115/200 (57%)
Query: 45 YDKSENDLKALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQ--VSLSTSVS 102
Y + ++L+ + Q +LL ++ Q EL + +L+ LQ G + +
Sbjct: 18 YTQKISELQFTVNERQKNLLR--LQAQRNELNLKVRLLREELQLLQEQGSYIAEVVKPMD 75
Query: 103 KCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSH 162
K V+VK +YVV + ++ + +RVAL + T+ + LP +VDPLV M
Sbjct: 76 KN-KVLVKVHPEGKYVVDVDKTINIKDVTPSSRVALRNESYTLHKILPNKVDPLVSLMLV 134
Query: 163 EDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLA 222
E D TY +GGL +QI+E++EVIELP+ +PELF +GIT PKG LLYGPPGTGKTLLA
Sbjct: 135 EKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLA 194
Query: 223 RAVASQLDANFLKVVSSLFV 242
RAVA + F++V S V
Sbjct: 195 RAVAHHTECTFIRVSGSELV 214
Score = 87 (35.7 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKV--SDNKK 495
TEAG++A+R R +VTQEDF AV KV D++K
Sbjct: 357 TEAGMYALRERRVHVTQEDFEMAVSKVMMKDSEK 390
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 559 (201.8 bits), Expect = 2.0e-57, Sum P(2) = 2.0e-57
Identities = 106/174 (60%), Positives = 132/174 (75%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ K VIELP+ +PELF+ +GI PKG +LYGPPGTGKTLLARAVA + F++V S +
Sbjct: 155 EIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTECKFIRVSGSEL 214
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V KYIGE +R++RE+F AR H P IIFMDEID+IG R + D E+QRT++ELLNQ
Sbjct: 215 VQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQ 274
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+DGF+S +K+IMATNR D LDPALLRPGR+DRKIE P P AR +ILKIH+
Sbjct: 275 LDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEFPAPTVAARTDILKIHS 328
Score = 478 (173.3 bits), Expect = 3.5e-77, Sum P(2) = 3.5e-77
Identities = 98/195 (50%), Positives = 128/195 (65%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH E + S +V KYIGE +R++RE+F AR H P IIFMDEID+IG R
Sbjct: 194 LARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSR 253
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
+ D E+QRT++ELLNQ+DGF+S +K+IMATNR D LDPALLRPGR+DRKIE P
Sbjct: 254 VEGSSGGDSEVQRTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEFP 313
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
P AR T + IH+ + I+ + + + +GAD++ VCTEAG++A+R R
Sbjct: 314 APTVAAR---TDILKIHSRSMNLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALRERR 370
Query: 436 EYVTQEDFMKAVRKV 450
+VTQEDF AV KV
Sbjct: 371 IHVTQEDFELAVAKV 385
Score = 326 (119.8 bits), Expect = 3.5e-77, Sum P(2) = 3.5e-77
Identities = 74/179 (41%), Positives = 104/179 (58%)
Query: 65 LHCVREQLKELTKQYDKSENDLKALQSVGQ-VSLSTSVSKCWTVIVKATNGPRYVVGCRR 123
L + Q +L + + +++LK LQ G V V V+VK +++V +
Sbjct: 37 LRRLEAQRNKLNNKVRQLKDELKLLQEPGSYVGEVVKVMGLKKVLVKIHPEGKFIVNVTK 96
Query: 124 QLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIREL 183
+D KL RV L + + + LP +VDPLV M E D TY +GGL +QI+E+
Sbjct: 97 DIDVKKLTPSIRVCLKPDSHDLYKILPTKVDPLVSLMMVEKVPDSTYDMVGGLDKQIKEI 156
Query: 184 REVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
+EVIELP+ +PELF+ +GI PKG +LYGPPGTGKTLLARAVA + F++V S V
Sbjct: 157 KEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTECKFIRVSGSELV 215
Score = 84 (34.6 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 447 VRKVSDNKKLDHCNSYR-----TEAGLFAIRSEREYVTQEDFMKAVRKV 490
+RK+++ K++ C+ TEAG++A+R R +VTQEDF AV KV
Sbjct: 339 LRKIAE--KMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAVAKV 385
Score = 49 (22.3 bits), Expect = 2.0e-57, Sum P(2) = 2.0e-57
Identities = 24/112 (21%), Positives = 49/112 (43%)
Query: 1 MTTPVVDEVRHKT-LQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSEN-------DL 52
MTT + H+ ++ Y ++ + E+ R+++ + L+ L Q +K N +L
Sbjct: 1 MTTSIDKSYVHEGGIRPYFEQQIQDTEI--RIQQTTQNLRRLEAQRNKLNNKVRQLKDEL 58
Query: 53 KALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKC 104
K LQ G + + V K L K + + + + + + L+ S+ C
Sbjct: 59 KLLQEPGSYVGEVVKVMGLKKVLVKIHPEGKFIVNVTKDIDVKKLTPSIRVC 110
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 561 (202.5 bits), Expect = 9.9e-58, Sum P(2) = 9.9e-58
Identities = 107/175 (61%), Positives = 133/175 (76%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ K VIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++V S +
Sbjct: 156 EIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 215
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSA-DREIQRTLMELLN 619
V KYIGE +R++RE+F AR H P IIFMDEID+IG R G+ D E+QRT++ELLN
Sbjct: 216 VQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLN 275
Query: 620 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
Q+DGF+S +K++M TNR D LDPALLRPGR+DRKIE P P + RL+ILKIH+
Sbjct: 276 QLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGRLDILKIHS 330
Score = 465 (168.7 bits), Expect = 4.9e-77, Sum P(2) = 4.9e-77
Identities = 99/199 (49%), Positives = 131/199 (65%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH + T+ S +V KYIGE +R++RE+F AR H P IIFMDEID+IG R
Sbjct: 195 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSR 254
Query: 316 FSEGTSA-DREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEI 374
G+ D E+QRT++ELLNQ+DGF+S +K++M TNR D LDPALLRPGR+DRKIE
Sbjct: 255 GESGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEF 314
Query: 375 PLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGA---DLRNVCTEAGLFAI 431
P P + RL + IH+ + I+ + K+SD NGA +L+ VCTEAG++A+
Sbjct: 315 PNPGDAGRLDI---LKIHSRKMNLTRGINLK---KISDKMNGASGAELKAVCTEAGMYAL 368
Query: 432 RSEREYVTQEDFMKAVRKV 450
R R +V+QEDF AV KV
Sbjct: 369 RERRVHVSQEDFEMAVSKV 387
Score = 339 (124.4 bits), Expect = 4.9e-77, Sum P(2) = 4.9e-77
Identities = 82/212 (38%), Positives = 118/212 (55%)
Query: 32 REMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQS 91
++ +++ K + Y +L+ + DL + Q EL + + +L+ L +
Sbjct: 7 QQNKDETKGIKSYYCSKIEELEIKVNEKAQDL--RRLEAQRNELNNRVRMLKEELQLLTN 64
Query: 92 VGQ-VSLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLP 150
G V+ + V+VK ++VV +D AKL TR AL + T+ R LP
Sbjct: 65 PGSHVAEVVKLMGKNKVLVKVNPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILP 124
Query: 151 REVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLL 210
++DPLV M E D TY +GGL +QI+E++EVIELP+ +PELF+ +GI PKG LL
Sbjct: 125 NKIDPLVSLMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLL 184
Query: 211 YGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
YGPPGTGKTLLARAVA D F++V S V
Sbjct: 185 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 216
Score = 81 (33.6 bits), Expect = 8.1e-36, Sum P(2) = 8.1e-36
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKV 490
TEAG++A+R R +V+QEDF AV KV
Sbjct: 361 TEAGMYALRERRVHVSQEDFEMAVSKV 387
Score = 50 (22.7 bits), Expect = 9.9e-58, Sum P(2) = 9.9e-58
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 8 EVRHKTLQDYRKKLTEHAEVEGRLREMREQLKELT 42
+V K QD R+ + E+ R+R ++E+L+ LT
Sbjct: 30 KVNEKA-QDLRRLEAQRNELNNRVRMLKEELQLLT 63
Score = 43 (20.2 bits), Expect = 7.2e-46, Sum P(2) = 7.2e-46
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 14 LQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQH 61
+++ K+ E A+ LR + Q EL + + +L+ L + G H
Sbjct: 24 IEELEIKVNEKAQ---DLRRLEAQRNELNNRVRMLKEELQLLTNPGSH 68
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 570 (205.7 bits), Expect = 2.9e-76, Sum P(2) = 2.9e-76
Identities = 134/364 (36%), Positives = 210/364 (57%)
Query: 325 EIQRTLM-ELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARL 383
E++R ++ +LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RL
Sbjct: 317 EVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRL 376
Query: 384 AHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDF 443
+ IH + ++D E V + GADL +C+EA L AIR + + + ED
Sbjct: 377 EI---LQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED- 432
Query: 444 MKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKV-SDNKKLES-KLD 501
+ + N + +R +A+ +E ++ + D LE K +
Sbjct: 433 -ETIDAEVMNSLAVTMDDFR-----WALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRE 486
Query: 502 YKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIV 561
+ +++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ + ++
Sbjct: 487 LQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 546
Query: 562 DKYIGESARLIREMFNYARNHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLMEL 617
+ GES +RE+F+ AR PC++F DE+D+I GG G +ADR I ++
Sbjct: 547 TMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN----QI 602
Query: 618 LNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAG 675
L +MDG + V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E++R+ ILK +
Sbjct: 603 LTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKS 662
Query: 676 PIAK 679
P+AK
Sbjct: 663 PVAK 666
Score = 323 (118.8 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 106/306 (34%), Positives = 157/306 (51%)
Query: 378 NEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNG--ADLRNVCTEAG-LFAIRSE 434
N + RL ISI P K+G+ + V+ + D+ G +L V + L A R
Sbjct: 91 NLRVRLGDV--ISIQPCPDVKYGKRIH--VLPIDDTVEGITGNLFEVYLKPYFLEAYRPI 146
Query: 435 R--EYVTQEDFMKAVR-KVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVS 491
R + M+AV KV + +C A I E E + +ED +++ +V
Sbjct: 147 RKGDIFLVRGGMRAVEFKVVETDPSPYC----IVAPDTVIHCEGEPIKREDEEESLNEVG 202
Query: 492 --DNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL 548
D +L K ++ELPL +P LF+ +G+ PP+G LLYGPPGTGKTL+ARAVA++
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 549 DANFLKVVSSAIVDKYIGESARLIREMFNYARNH-QPCIIFMDEIDAIGGRRFSEGTSAD 607
A F + I+ K GE R+ + A + IF + D S T +
Sbjct: 263 GAFFFLINGPEIMSKLAGEGESACRKKISPAPPPLKTAGIFKSD-DCFP----SPQTHGE 317
Query: 608 REIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARL 667
E +R + +LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RL
Sbjct: 318 VE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRL 376
Query: 668 EILKIH 673
EIL+IH
Sbjct: 377 EILQIH 382
Score = 314 (115.6 bits), Expect = 2.9e-42, Sum P(2) = 2.9e-42
Identities = 78/235 (33%), Positives = 126/235 (53%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI---- 311
L + + + + ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 525 LAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 584
Query: 312 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 371
GG G +ADR I ++L +MDG + V +I ATNRPD +DPA+LRPGRLD+
Sbjct: 585 GGNIGDGGGAADRVIN----QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQL 640
Query: 372 IEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI 431
I IPLP+E++R+A ++ P+AK ++D + + K+++ F+GADL +C A AI
Sbjct: 641 IYIPLPDEKSRVA-ILKANLRKSPVAK--DVDLDFLAKMTNGFSGADLTEICQRACKLAI 697
Query: 432 RSEREY-VTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
R E + +E + + ++ D R + A+R R V+ D K
Sbjct: 698 RESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 752
Score = 217 (81.4 bits), Expect = 2.9e-76, Sum P(2) = 2.9e-76
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
E +P+ E ++ Y IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
Query: 212 GPPGTGKTLLARAVASQLDANFLKV 236
GPPGTGKTL+ARAVA++ A F +
Sbjct: 245 GPPGTGKTLIARAVANETGAFFFLI 269
Score = 205 (77.2 bits), Expect = 5.3e-41, Sum P(2) = 5.3e-41
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 177
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 422 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 481
Query: 178 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 482 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 540
>ZFIN|ZDB-GENE-040426-2871 [details] [associations]
symbol:nvl "nuclear VCP-like" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2871 GO:GO:0005524 HSSP:Q01853 GO:GO:0017111
KO:K14571 CTD:4931 HOVERGEN:HBG001226 EMBL:BC044464 IPI:IPI00503965
RefSeq:NP_998649.1 UniGene:Dr.2359 ProteinModelPortal:Q803I9
STRING:Q803I9 PRIDE:Q803I9 GeneID:406805 KEGG:dre:406805
NextBio:20818314 ArrayExpress:Q803I9 Bgee:Q803I9 Uniprot:Q803I9
Length = 796
Score = 597 (215.2 bits), Expect = 5.5e-76, Sum P(3) = 5.5e-76
Identities = 157/412 (38%), Positives = 230/412 (55%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
+V GES + +RE+F A + PCI+F+DEIDAI +R E S D E +R + +LL
Sbjct: 296 LVSGVSGESEQKLRELFEQAISSAPCILFIDEIDAITPKR--ETASKDME-RRIVAQLLT 352
Query: 336 QMDGFDSL---GQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIH 392
MD +S+ QV +I ATNRPD+LDPAL R GR DR+I + +P+E AR+ +
Sbjct: 353 CMDDLNSMLEPAQVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEGARMKI---LKTL 409
Query: 393 AGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI-RSEREYVTQEDFMK--AVRK 449
I + D+ + +L+ + GADL +C EA + A+ R E T++ A+ +
Sbjct: 410 CRKIRLPDDFDFRHLARLTPGYVGADLMALCREAAMNAVNRILLEPTTEDQITPTLALAR 469
Query: 450 VSDNKKLDHCNSYRTEAGLFAIRSE--------REYVTQEDFMKAVRKVS--DNKKLES- 498
+ D K S A L + S+ + +E F V V+ D L+
Sbjct: 470 LLDLLKSSVSLSEDQLAALCVLMSDFSSSLVRVQPSAKREGFA-TVPDVTWADVGALQDV 528
Query: 499 KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 558
+ + I P+ NPE F+ +G++ P G LL GPPG GKTLLA+AVA+ NF+ V
Sbjct: 529 REELHMAIMAPIQNPEQFKALGLSAPAGLLLAGPPGCGKTLLAKAVANASGLNFISVKGP 588
Query: 559 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 618
+++ Y+GES R +R++F RN PC+IF DEIDA+ RR + A R + +LL
Sbjct: 589 ELLNMYVGESERAVRQVFQRGRNSAPCVIFFDEIDALCPRRSEHESGAS---VRVVNQLL 645
Query: 619 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEIL 670
+MDG ++ QV ++ ATNRPD +DPA+LRPGRLD+ + + LP R IL
Sbjct: 646 TEMDGMENRRQVFIMAATNRPDIIDPAVLRPGRLDKTLYVGLPPAADRHAIL 697
Score = 385 (140.6 bits), Expect = 2.1e-32, P = 2.1e-32
Identities = 102/267 (38%), Positives = 156/267 (58%)
Query: 409 KLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNK-KLDHCNSYRTEAG 467
K D + L ++C E + ++R+ E K+V++ K KL+ + T AG
Sbjct: 150 KTGDRGQESILIDLCEEESS-STTNQRDSSRLEKEKKSVKQKRQKKNKLEEDSE--TSAG 206
Query: 468 LFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKPVIELPLLNPELFQRVGITPPKGC 527
+ A +S+ V + + K D + L+ + + + +PE++QR+G+ PP+G
Sbjct: 207 VPAKKSK---VKGFELQFSSVKFEDFGGSDETLEEVCKLLIHMRHPEVYQRLGVVPPRGF 263
Query: 528 LLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCII 587
LL+GPPG GKTLLA+AVA + LK+ + +V GES + +RE+F A + PCI+
Sbjct: 264 LLHGPPGCGKTLLAQAVAGETALPLLKISAPELVSGVSGESEQKLRELFEQAISSAPCIL 323
Query: 588 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSL---GQVKMIMATNRPDTLDP 644
F+DEIDAI +R E S D E +R + +LL MD +S+ QV +I ATNRPD+LDP
Sbjct: 324 FIDEIDAITPKR--ETASKDME-RRIVAQLLTCMDDLNSMLEPAQVLVIGATNRPDSLDP 380
Query: 645 ALLRPGRLDRKIEIPLPNEQARLEILK 671
AL R GR DR+I + +P+E AR++ILK
Sbjct: 381 ALRRAGRFDREICLGIPDEGARMKILK 407
Score = 260 (96.6 bits), Expect = 5.7e-31, Sum P(3) = 5.7e-31
Identities = 60/159 (37%), Positives = 92/159 (57%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
+++ Y+GES R +R++F RN PC+IF DEIDA+ RR + A R + +LL
Sbjct: 590 LLNMYVGESERAVRQVFQRGRNSAPCVIFFDEIDALCPRRSEHESGAS---VRVVNQLLT 646
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
+MDG ++ QV ++ ATNRPD +DPA+LRPGRLD+ + + LP R A I+
Sbjct: 647 EMDGMENRRQVFIMAATNRPDIIDPAVLRPGRLDKTLYVGLPPAADRHAILNTITKGGTK 706
Query: 396 IAKHGEIDYEAVVKLS--DSFNGADLRNVCTEAGLFAIR 432
++ E + + ++F GADL + EA + A+R
Sbjct: 707 PQLDSDVSLEEIAHDARCETFTGADLSALVREACVNALR 745
Score = 169 (64.5 bits), Expect = 5.7e-31, Sum P(3) = 5.7e-31
Identities = 33/70 (47%), Positives = 46/70 (65%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
D+T++ +G L + EL I P+ NPE F+ +G++ P G LL GPPG GKTLLA+AVA
Sbjct: 516 DVTWADVGALQDVREELHMAIMAPIQNPEQFKALGLSAPAGLLLAGPPGCGKTLLAKAVA 575
Query: 227 SQLDANFLKV 236
+ NF+ V
Sbjct: 576 NASGLNFISV 585
Score = 158 (60.7 bits), Expect = 5.5e-76, Sum P(3) = 5.5e-76
Identities = 29/69 (42%), Positives = 48/69 (69%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+ + GG E + E+ +++ + + +PE++QR+G+ PP+G LL+GPPG GKTLLA+AVA
Sbjct: 224 VKFEDFGGSDETLEEVCKLL-IHMRHPEVYQRLGVVPPRGFLLHGPPGCGKTLLAQAVAG 282
Query: 228 QLDANFLKV 236
+ LK+
Sbjct: 283 ETALPLLKI 291
Score = 42 (19.8 bits), Expect = 5.5e-76, Sum P(3) = 5.5e-76
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 59 GQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQ 94
GQ +L+ E+ T Q D S + K +SV Q
Sbjct: 155 GQESILIDLCEEESSSTTNQRDSSRLE-KEKKSVKQ 189
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 564 (203.6 bits), Expect = 8.3e-76, Sum P(2) = 8.3e-76
Identities = 146/374 (39%), Positives = 207/374 (55%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
I+ K+ GE+ +R++F A P IIF+DE+DA+ +R EG ++ E +R + LL
Sbjct: 423 IISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQSEVE-KRVVASLLT 479
Query: 336 QMDGFDSLG---QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIH 392
MDG S G +V ++ ATNRP LD AL RPGR D++IEI +PN Q RL +
Sbjct: 480 LMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRR 539
Query: 393 AGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE-REYVTQEDFMKA-VRKV 450
+ E+ + + + GADL+ +C EAGL+A+R R+ D A + K+
Sbjct: 540 VPHLLTKAEL--LRLANNAHGYVGADLKALCNEAGLYALRRVLRKQPNLPDSKVAGMVKI 597
Query: 451 SDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLES-KLDYKPVIELP 509
+ N L N R A RE D SD LE+ KL K +E P
Sbjct: 598 TLNDFLQGMNDIRPSA-------MREVAI--DVPNV--SWSDIGGLENIKLKLKQAVEWP 646
Query: 510 LLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESA 569
L +P+ F R+GI PPKG LLYGPPG KT++A+A+A++ NFL + +++KY+GES
Sbjct: 647 LKHPKSFSRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESE 706
Query: 570 RLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQ 629
R +RE+F AR P IIF DE+DA+ R S + A R L +LL +MDG + L
Sbjct: 707 RAVREVFRKARAVAPSIIFFDELDALAVERGSS-SGAGNVADRVLAQLLTEMDGIEQLKN 765
Query: 630 VKMIMATNRPDTLD 643
V ++ ATNRPD +D
Sbjct: 766 VTVLAATNRPDRID 779
Score = 383 (139.9 bits), Expect = 4.0e-32, P = 4.0e-32
Identities = 86/181 (47%), Positives = 122/181 (67%)
Query: 496 LESKLD-YKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 554
L S+L + +IELPL PELF+ GI P+G LLYGPPGTGKT++ARAVA+++ A ++
Sbjct: 358 LNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGA-YVS 416
Query: 555 VVSSA-IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRT 613
V++ I+ K+ GE+ +R++F A P IIF+DE+DA+ +R EG ++ E +R
Sbjct: 417 VINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQSEVE-KRV 473
Query: 614 LMELLNQMDGFDSLG---QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEIL 670
+ LL MDG S G +V ++ ATNRP LD AL RPGR D++IEI +PN Q RL+IL
Sbjct: 474 VASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDIL 533
Query: 671 K 671
+
Sbjct: 534 Q 534
Score = 225 (84.3 bits), Expect = 8.3e-76, Sum P(2) = 8.3e-76
Identities = 42/78 (53%), Positives = 60/78 (76%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+TY IGGL+ Q++ +RE+IELPL PELF+ GI P+G LLYGPPGTGKT++ARAVA+
Sbjct: 350 VTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409
Query: 228 QLDANFLKVVSSLFVTSK 245
++ A ++ V++ + SK
Sbjct: 410 EVGA-YVSVINGPEIISK 426
Score = 195 (73.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 46/118 (38%), Positives = 72/118 (61%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTIMRYLP--REVDPLVYNMSHEDPGDITYSAIGGLSEQ 179
RR L K ++VA M +T+ +L ++ P D ++++S IGGL E
Sbjct: 577 RRVLRKQPNLPDSKVA-GMVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGL-EN 634
Query: 180 IR-ELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
I+ +L++ +E PL +P+ F R+GI PPKG LLYGPPG KT++A+A+A++ NFL +
Sbjct: 635 IKLKLKQAVEWPLKHPKSFSRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAI 692
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 127/269 (47%), Positives = 173/269 (64%)
Query: 413 SFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCN-SYRTEAGLFAI 471
S+ G ++ + T+ L + E +YV + K++ K++ + SY+ E L +
Sbjct: 54 SYVGEVVKVMSTKKVLVKVHPEGKYVVDIADGVDIGKLTVGKRVALLSDSYKLEKMLPS- 112
Query: 472 RSEREYVTQEDFMKAVRKVSDNKK-----LESKL-DYKPVIELPLLNPELFQRVGITPPK 525
S V+ + V KV D+ L+ ++ + K VIEL L +PELF+ +GI PK
Sbjct: 113 -SVDPLVS----LMMVEKVPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPK 167
Query: 526 GCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPC 585
G LLYGPPGTGKTLLARAVA D F++V S +V KYIGE +R++RE+F AR H P
Sbjct: 168 GVLLYGPPGTGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS 227
Query: 586 IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPA 645
IIFMDEID+IG R S D E+QRT++ELLNQ+DGF+ +K+IMATNR D LDPA
Sbjct: 228 IIFMDEIDSIGSSRIDSAGSGDSEVQRTMLELLNQLDGFEPTKNIKIIMATNRLDILDPA 287
Query: 646 LLRPGRLDRKIEIPLPNEQARLEILKIHA 674
LLRPGR+DRKIE P P+ +AR +IL+IH+
Sbjct: 288 LLRPGRIDRKIEFPPPSVEARADILRIHS 316
Score = 467 (169.5 bits), Expect = 1.1e-75, Sum P(2) = 1.1e-75
Identities = 98/202 (48%), Positives = 131/202 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH + + S +V KYIGE +R++RE+F AR H P IIFMDEID+IG R
Sbjct: 182 LARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSR 241
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
S D E+QRT++ELLNQ+DGF+ +K+IMATNR D LDPALLRPGR+DRKIE P
Sbjct: 242 IDSAGSGDSEVQRTMLELLNQLDGFEPTKNIKIIMATNRLDILDPALLRPGRIDRKIEFP 301
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
P+ +AR A + IH+ + I+ + + + +GA+L+ VCTEAG++A+R R
Sbjct: 302 PPSVEAR-ADI--LRIHSRSMNLTRGINLTKIAEKMNGCSGAELKGVCTEAGMYALRERR 358
Query: 436 EYVTQEDFMKAVRKVSDNKKLD 457
+VTQEDF A K+ NK D
Sbjct: 359 VHVTQEDFDLATAKIL-NKHDD 379
Score = 324 (119.1 bits), Expect = 1.1e-75, Sum P(2) = 1.1e-75
Identities = 81/195 (41%), Positives = 107/195 (54%)
Query: 50 NDLKALQ-SVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQ-VSLSTSVSKCWTV 107
N +++++ + Q +L + Q + + +L LQ G V V V
Sbjct: 9 NKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMSTKKV 68
Query: 108 IVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGD 167
+VK +YVV +D KL G RVAL + + + LP VDPLV M E D
Sbjct: 69 LVKVHPEGKYVVDIADGVDIGKLTVGKRVALLSDSYKLEKMLPSSVDPLVSLMMVEKVPD 128
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
TY IGGL +QI+E++EVIEL L +PELF+ +GI PKG LLYGPPGTGKTLLARAVA
Sbjct: 129 STYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 188
Query: 228 QLDANFLKVVSSLFV 242
D F++V S V
Sbjct: 189 HTDCRFIRVSGSELV 203
Score = 81 (33.6 bits), Expect = 3.5e-34, Sum P(2) = 3.5e-34
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKV---SDNKKLE-SKL 500
TEAG++A+R R +VTQEDF A K+ D+K++ SKL
Sbjct: 347 TEAGMYALRERRVHVTQEDFDLATAKILNKHDDKEVAVSKL 387
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 528 (190.9 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 102/170 (60%), Positives = 129/170 (75%)
Query: 499 KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 558
K + + +ELPL + EL++++GI PP+G L+YGPPG GKT+LA+AVA A F++VV S
Sbjct: 173 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 232
Query: 559 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 618
V KY+GE R++R++F A+ + P IIF+DEIDAI +RF T ADRE+QR L+ELL
Sbjct: 233 EFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELL 292
Query: 619 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE-QARL 667
NQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE PLP+ Q RL
Sbjct: 293 NQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 342
Score = 464 (168.4 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 97/204 (47%), Positives = 125/204 (61%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + HH + S V KY+GE R++R++F A+ + P IIF+DEIDAI +R
Sbjct: 214 LAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR 273
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F T ADRE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE P
Sbjct: 274 FDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFP 333
Query: 376 LPNE-QARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE 434
LP+ Q RL S + E+D E V D +GAD+ ++C E+G+ A+R
Sbjct: 334 LPDRRQKRLI----FSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVREN 389
Query: 435 REYVTQEDFMKAVRKVSDNKKLDH 458
R V +DF KA + V + +H
Sbjct: 390 RYIVLAKDFEKAYKTVIKKDEQEH 413
Score = 323 (118.8 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 73/209 (34%), Positives = 123/209 (58%)
Query: 36 EQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQV 95
E L++L +Y K + +L+ L+ ++ ++++ K L K++ ++ ++K +QS+ V
Sbjct: 34 EDLEDLYSRYKKLQQELEFLEVQEEY------IKDEQKNLKKEFLHAQEEVKRIQSIPLV 87
Query: 96 --SLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREV 153
+V + T IV +T G Y V +D+ LK VAL + ++ LP E
Sbjct: 88 IGQFLEAVDQN-TAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEA 146
Query: 154 DPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGP 213
D + ++ + D+ Y+ IGG+ Q +E+RE +ELPL + EL++++GI PP+G L+YGP
Sbjct: 147 DSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGP 206
Query: 214 PGTGKTLLARAVASQLDANFLKVVSSLFV 242
PG GKT+LA+AVA A F++VV S FV
Sbjct: 207 PGCGKTMLAKAVAHHTTAAFIRVVGSEFV 235
Score = 68 (29.0 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 495
E V ED++ K+S D NS E+G+ A+R R V +DF KA + V +
Sbjct: 355 EEVDLEDYVARPDKISG---AD-INSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDE 410
Query: 496 LESKLDYK 503
E + YK
Sbjct: 411 QEHEF-YK 417
Score = 51 (23.0 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 11/41 (26%), Positives = 26/41 (63%)
Query: 19 KKLTEHAE-VEGRLREMREQLKELTKQYDKSENDLKALQSV 58
KKL + E +E + ++++ K L K++ ++ ++K +QS+
Sbjct: 44 KKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSI 84
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 528 (190.9 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 102/170 (60%), Positives = 129/170 (75%)
Query: 499 KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 558
K + + +ELPL + EL++++GI PP+G L+YGPPG GKT+LA+AVA A F++VV S
Sbjct: 174 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 233
Query: 559 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 618
V KY+GE R++R++F A+ + P IIF+DEIDAI +RF T ADRE+QR L+ELL
Sbjct: 234 EFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELL 293
Query: 619 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE-QARL 667
NQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE PLP+ Q RL
Sbjct: 294 NQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 343
Score = 464 (168.4 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 97/204 (47%), Positives = 125/204 (61%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + HH + S V KY+GE R++R++F A+ + P IIF+DEIDAI +R
Sbjct: 215 LAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR 274
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F T ADRE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE P
Sbjct: 275 FDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFP 334
Query: 376 LPNE-QARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE 434
LP+ Q RL S + E+D E V D +GAD+ ++C E+G+ A+R
Sbjct: 335 LPDRRQKRLI----FSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVREN 390
Query: 435 REYVTQEDFMKAVRKVSDNKKLDH 458
R V +DF KA + V + +H
Sbjct: 391 RYIVLAKDFEKAYKTVIKKDEQEH 414
Score = 323 (118.8 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 73/209 (34%), Positives = 123/209 (58%)
Query: 36 EQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQV 95
E L++L +Y K + +L+ L+ ++ ++++ K L K++ ++ ++K +QS+ V
Sbjct: 35 EDLEDLYSRYKKLQQELEFLEVQEEY------IKDEQKNLKKEFLHAQEEVKRIQSIPLV 88
Query: 96 --SLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREV 153
+V + T IV +T G Y V +D+ LK VAL + ++ LP E
Sbjct: 89 IGQFLEAVDQN-TAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEA 147
Query: 154 DPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGP 213
D + ++ + D+ Y+ IGG+ Q +E+RE +ELPL + EL++++GI PP+G L+YGP
Sbjct: 148 DSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGP 207
Query: 214 PGTGKTLLARAVASQLDANFLKVVSSLFV 242
PG GKT+LA+AVA A F++VV S FV
Sbjct: 208 PGCGKTMLAKAVAHHTTAAFIRVVGSEFV 236
Score = 68 (29.0 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 495
E V ED++ K+S D NS E+G+ A+R R V +DF KA + V +
Sbjct: 356 EEVDLEDYVARPDKISG---AD-INSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDE 411
Query: 496 LESKLDYK 503
E + YK
Sbjct: 412 QEHEF-YK 418
Score = 51 (23.0 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 11/41 (26%), Positives = 26/41 (63%)
Query: 19 KKLTEHAE-VEGRLREMREQLKELTKQYDKSENDLKALQSV 58
KKL + E +E + ++++ K L K++ ++ ++K +QS+
Sbjct: 45 KKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSI 85
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 528 (190.9 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 102/170 (60%), Positives = 129/170 (75%)
Query: 499 KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 558
K + + +ELPL + EL++++GI PP+G L+YGPPG GKT+LA+AVA A F++VV S
Sbjct: 174 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 233
Query: 559 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 618
V KY+GE R++R++F A+ + P IIF+DEIDAI +RF T ADRE+QR L+ELL
Sbjct: 234 EFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELL 293
Query: 619 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE-QARL 667
NQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE PLP+ Q RL
Sbjct: 294 NQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 343
Score = 464 (168.4 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 97/204 (47%), Positives = 125/204 (61%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + HH + S V KY+GE R++R++F A+ + P IIF+DEIDAI +R
Sbjct: 215 LAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR 274
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F T ADRE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE P
Sbjct: 275 FDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFP 334
Query: 376 LPNE-QARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE 434
LP+ Q RL S + E+D E V D +GAD+ ++C E+G+ A+R
Sbjct: 335 LPDRRQKRLI----FSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVREN 390
Query: 435 REYVTQEDFMKAVRKVSDNKKLDH 458
R V +DF KA + V + +H
Sbjct: 391 RYIVLAKDFEKAYKTVIKKDEQEH 414
Score = 323 (118.8 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 73/209 (34%), Positives = 123/209 (58%)
Query: 36 EQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQV 95
E L++L +Y K + +L+ L+ ++ ++++ K L K++ ++ ++K +QS+ V
Sbjct: 35 EDLEDLYSRYKKLQQELEFLEVQEEY------IKDEQKNLKKEFLHAQEEVKRIQSIPLV 88
Query: 96 --SLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREV 153
+V + T IV +T G Y V +D+ LK VAL + ++ LP E
Sbjct: 89 IGQFLEAVDQN-TAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEA 147
Query: 154 DPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGP 213
D + ++ + D+ Y+ IGG+ Q +E+RE +ELPL + EL++++GI PP+G L+YGP
Sbjct: 148 DSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGP 207
Query: 214 PGTGKTLLARAVASQLDANFLKVVSSLFV 242
PG GKT+LA+AVA A F++VV S FV
Sbjct: 208 PGCGKTMLAKAVAHHTTAAFIRVVGSEFV 236
Score = 68 (29.0 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 495
E V ED++ K+S D NS E+G+ A+R R V +DF KA + V +
Sbjct: 356 EEVDLEDYVARPDKISG---AD-INSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDE 411
Query: 496 LESKLDYK 503
E + YK
Sbjct: 412 QEHEF-YK 418
Score = 51 (23.0 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 11/41 (26%), Positives = 26/41 (63%)
Query: 19 KKLTEHAE-VEGRLREMREQLKELTKQYDKSENDLKALQSV 58
KKL + E +E + ++++ K L K++ ++ ++K +QS+
Sbjct: 45 KKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSI 85
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 528 (190.9 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 102/170 (60%), Positives = 129/170 (75%)
Query: 499 KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 558
K + + +ELPL + EL++++GI PP+G L+YGPPG GKT+LA+AVA A F++VV S
Sbjct: 174 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 233
Query: 559 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 618
V KY+GE R++R++F A+ + P IIF+DEIDAI +RF T ADRE+QR L+ELL
Sbjct: 234 EFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELL 293
Query: 619 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE-QARL 667
NQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE PLP+ Q RL
Sbjct: 294 NQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 343
Score = 464 (168.4 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 97/204 (47%), Positives = 125/204 (61%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + HH + S V KY+GE R++R++F A+ + P IIF+DEIDAI +R
Sbjct: 215 LAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR 274
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F T ADRE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE P
Sbjct: 275 FDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFP 334
Query: 376 LPNE-QARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE 434
LP+ Q RL S + E+D E V D +GAD+ ++C E+G+ A+R
Sbjct: 335 LPDRRQKRLI----FSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVREN 390
Query: 435 REYVTQEDFMKAVRKVSDNKKLDH 458
R V +DF KA + V + +H
Sbjct: 391 RYIVLAKDFEKAYKTVIKKDEQEH 414
Score = 323 (118.8 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 73/209 (34%), Positives = 123/209 (58%)
Query: 36 EQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQV 95
E L++L +Y K + +L+ L+ ++ ++++ K L K++ ++ ++K +QS+ V
Sbjct: 35 EDLEDLYSRYKKLQQELEFLEVQEEY------IKDEQKNLKKEFLHAQEEVKRIQSIPLV 88
Query: 96 --SLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREV 153
+V + T IV +T G Y V +D+ LK VAL + ++ LP E
Sbjct: 89 IGQFLEAVDQN-TAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEA 147
Query: 154 DPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGP 213
D + ++ + D+ Y+ IGG+ Q +E+RE +ELPL + EL++++GI PP+G L+YGP
Sbjct: 148 DSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGP 207
Query: 214 PGTGKTLLARAVASQLDANFLKVVSSLFV 242
PG GKT+LA+AVA A F++VV S FV
Sbjct: 208 PGCGKTMLAKAVAHHTTAAFIRVVGSEFV 236
Score = 68 (29.0 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 495
E V ED++ K+S D NS E+G+ A+R R V +DF KA + V +
Sbjct: 356 EEVDLEDYVARPDKISG---AD-INSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDE 411
Query: 496 LESKLDYK 503
E + YK
Sbjct: 412 QEHEF-YK 418
Score = 51 (23.0 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 11/41 (26%), Positives = 26/41 (63%)
Query: 19 KKLTEHAE-VEGRLREMREQLKELTKQYDKSENDLKALQSV 58
KKL + E +E + ++++ K L K++ ++ ++K +QS+
Sbjct: 45 KKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSI 85
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 528 (190.9 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 102/170 (60%), Positives = 129/170 (75%)
Query: 499 KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 558
K + + +ELPL + EL++++GI PP+G L+YGPPG GKT+LA+AVA A F++VV S
Sbjct: 174 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 233
Query: 559 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 618
V KY+GE R++R++F A+ + P IIF+DEIDAI +RF T ADRE+QR L+ELL
Sbjct: 234 EFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELL 293
Query: 619 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE-QARL 667
NQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE PLP+ Q RL
Sbjct: 294 NQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 343
Score = 464 (168.4 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 97/204 (47%), Positives = 125/204 (61%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + HH + S V KY+GE R++R++F A+ + P IIF+DEIDAI +R
Sbjct: 215 LAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR 274
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F T ADRE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE P
Sbjct: 275 FDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFP 334
Query: 376 LPNE-QARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE 434
LP+ Q RL S + E+D E V D +GAD+ ++C E+G+ A+R
Sbjct: 335 LPDRRQKRLI----FSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVREN 390
Query: 435 REYVTQEDFMKAVRKVSDNKKLDH 458
R V +DF KA + V + +H
Sbjct: 391 RYIVLAKDFEKAYKTVIKKDEQEH 414
Score = 323 (118.8 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 73/209 (34%), Positives = 123/209 (58%)
Query: 36 EQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQV 95
E L++L +Y K + +L+ L+ ++ ++++ K L K++ ++ ++K +QS+ V
Sbjct: 35 EDLEDLYSRYKKLQQELEFLEVQEEY------IKDEQKNLKKEFLHAQEEVKRIQSIPLV 88
Query: 96 --SLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREV 153
+V + T IV +T G Y V +D+ LK VAL + ++ LP E
Sbjct: 89 IGQFLEAVDQN-TAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEA 147
Query: 154 DPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGP 213
D + ++ + D+ Y+ IGG+ Q +E+RE +ELPL + EL++++GI PP+G L+YGP
Sbjct: 148 DSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGP 207
Query: 214 PGTGKTLLARAVASQLDANFLKVVSSLFV 242
PG GKT+LA+AVA A F++VV S FV
Sbjct: 208 PGCGKTMLAKAVAHHTTAAFIRVVGSEFV 236
Score = 68 (29.0 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 495
E V ED++ K+S D NS E+G+ A+R R V +DF KA + V +
Sbjct: 356 EEVDLEDYVARPDKISG---AD-INSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDE 411
Query: 496 LESKLDYK 503
E + YK
Sbjct: 412 QEHEF-YK 418
Score = 51 (23.0 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 11/41 (26%), Positives = 26/41 (63%)
Query: 19 KKLTEHAE-VEGRLREMREQLKELTKQYDKSENDLKALQSV 58
KKL + E +E + ++++ K L K++ ++ ++K +QS+
Sbjct: 45 KKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSI 85
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 528 (190.9 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 102/170 (60%), Positives = 129/170 (75%)
Query: 499 KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 558
K + + +ELPL + EL++++GI PP+G L+YGPPG GKT+LA+AVA A F++VV S
Sbjct: 174 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 233
Query: 559 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 618
V KY+GE R++R++F A+ + P IIF+DEIDAI +RF T ADRE+QR L+ELL
Sbjct: 234 EFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELL 293
Query: 619 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE-QARL 667
NQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE PLP+ Q RL
Sbjct: 294 NQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 343
Score = 464 (168.4 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 97/204 (47%), Positives = 125/204 (61%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + HH + S V KY+GE R++R++F A+ + P IIF+DEIDAI +R
Sbjct: 215 LAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR 274
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F T ADRE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE P
Sbjct: 275 FDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFP 334
Query: 376 LPNE-QARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE 434
LP+ Q RL S + E+D E V D +GAD+ ++C E+G+ A+R
Sbjct: 335 LPDRRQKRLI----FSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVREN 390
Query: 435 REYVTQEDFMKAVRKVSDNKKLDH 458
R V +DF KA + V + +H
Sbjct: 391 RYIVLAKDFEKAYKTVIKKDEQEH 414
Score = 323 (118.8 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 73/209 (34%), Positives = 123/209 (58%)
Query: 36 EQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQV 95
E L++L +Y K + +L+ L+ ++ ++++ K L K++ ++ ++K +QS+ V
Sbjct: 35 EDLEDLYSRYKKLQQELEFLEVQEEY------IKDEQKNLKKEFLHAQEEVKRIQSIPLV 88
Query: 96 --SLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREV 153
+V + T IV +T G Y V +D+ LK VAL + ++ LP E
Sbjct: 89 IGQFLEAVDQN-TAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEA 147
Query: 154 DPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGP 213
D + ++ + D+ Y+ IGG+ Q +E+RE +ELPL + EL++++GI PP+G L+YGP
Sbjct: 148 DSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGP 207
Query: 214 PGTGKTLLARAVASQLDANFLKVVSSLFV 242
PG GKT+LA+AVA A F++VV S FV
Sbjct: 208 PGCGKTMLAKAVAHHTTAAFIRVVGSEFV 236
Score = 68 (29.0 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 495
E V ED++ K+S D NS E+G+ A+R R V +DF KA + V +
Sbjct: 356 EEVDLEDYVARPDKISG---AD-INSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDE 411
Query: 496 LESKLDYK 503
E + YK
Sbjct: 412 QEHEF-YK 418
Score = 51 (23.0 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 11/41 (26%), Positives = 26/41 (63%)
Query: 19 KKLTEHAE-VEGRLREMREQLKELTKQYDKSENDLKALQSV 58
KKL + E +E + ++++ K L K++ ++ ++K +QS+
Sbjct: 45 KKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSI 85
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 528 (190.9 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 102/170 (60%), Positives = 129/170 (75%)
Query: 499 KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 558
K + + +ELPL + EL++++GI PP+G L+YGPPG GKT+LA+AVA A F++VV S
Sbjct: 174 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 233
Query: 559 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 618
V KY+GE R++R++F A+ + P IIF+DEIDAI +RF T ADRE+QR L+ELL
Sbjct: 234 EFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELL 293
Query: 619 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE-QARL 667
NQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE PLP+ Q RL
Sbjct: 294 NQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 343
Score = 464 (168.4 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 97/204 (47%), Positives = 125/204 (61%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + HH + S V KY+GE R++R++F A+ + P IIF+DEIDAI +R
Sbjct: 215 LAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR 274
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F T ADRE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE P
Sbjct: 275 FDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFP 334
Query: 376 LPNE-QARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE 434
LP+ Q RL S + E+D E V D +GAD+ ++C E+G+ A+R
Sbjct: 335 LPDRRQKRLI----FSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVREN 390
Query: 435 REYVTQEDFMKAVRKVSDNKKLDH 458
R V +DF KA + V + +H
Sbjct: 391 RYIVLAKDFEKAYKTVIKKDEQEH 414
Score = 323 (118.8 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 73/209 (34%), Positives = 123/209 (58%)
Query: 36 EQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQV 95
E L++L +Y K + +L+ L+ ++ ++++ K L K++ ++ ++K +QS+ V
Sbjct: 35 EDLEDLYSRYKKLQQELEFLEVQEEY------IKDEQKNLKKEFLHAQEEVKRIQSIPLV 88
Query: 96 --SLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREV 153
+V + T IV +T G Y V +D+ LK VAL + ++ LP E
Sbjct: 89 IGQFLEAVDQN-TAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEA 147
Query: 154 DPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGP 213
D + ++ + D+ Y+ IGG+ Q +E+RE +ELPL + EL++++GI PP+G L+YGP
Sbjct: 148 DSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGP 207
Query: 214 PGTGKTLLARAVASQLDANFLKVVSSLFV 242
PG GKT+LA+AVA A F++VV S FV
Sbjct: 208 PGCGKTMLAKAVAHHTTAAFIRVVGSEFV 236
Score = 68 (29.0 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 495
E V ED++ K+S D NS E+G+ A+R R V +DF KA + V +
Sbjct: 356 EEVDLEDYVARPDKISG---AD-INSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDE 411
Query: 496 LESKLDYK 503
E + YK
Sbjct: 412 QEHEF-YK 418
Score = 51 (23.0 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 11/41 (26%), Positives = 26/41 (63%)
Query: 19 KKLTEHAE-VEGRLREMREQLKELTKQYDKSENDLKALQSV 58
KKL + E +E + ++++ K L K++ ++ ++K +QS+
Sbjct: 45 KKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSI 85
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 103/189 (54%), Positives = 145/189 (76%)
Query: 496 LESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 554
LES++ + K +ELPL +PEL++ +GI PPKG +LYGPPGTGKTLLA+AVA++ A FL+
Sbjct: 198 LESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLR 257
Query: 555 VVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 614
VV S ++ KY+G+ +L+REMF A H P I+F+DEIDA+G +R+ + +REIQRT+
Sbjct: 258 VVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGEREIQRTM 317
Query: 615 MELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+ELLNQ+DGFDS G VK+IMATNR D+LDPAL+RPGR+DRKI++P P+ + + I +IH
Sbjct: 318 LELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHT 377
Query: 675 GPIAKHGEI 683
+ ++
Sbjct: 378 SKMTMSPDV 386
Score = 467 (169.5 bits), Expect = 6.0e-75, Sum P(2) = 6.0e-75
Identities = 90/200 (45%), Positives = 127/200 (63%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + T+ S ++ KY+G+ +L+REMF A H P I+F+DEIDA+G +R
Sbjct: 243 LAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKR 302
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR D+LDPAL+RPGR+DRKI++P
Sbjct: 303 YEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLP 362
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
P+ + + IH + ++D E V D +GAD++ +CTEAGL A+R R
Sbjct: 363 NPDTKTKRRI---FQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERR 419
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
+TQ D KA K KK
Sbjct: 420 MKITQADLRKARDKALFQKK 439
Score = 317 (116.6 bits), Expect = 6.0e-75, Sum P(2) = 6.0e-75
Identities = 77/174 (44%), Positives = 108/174 (62%)
Query: 69 REQLKELT-KQYDKSE-NDLKALQ-SVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRRQL 125
+EQ+K K Y K + +DL+ SVG +L + + +I + GP Y V +
Sbjct: 91 QEQIKSSDDKNYVKLKIDDLRGSPVSVG--TLEELIDENHGIIATSV-GPEYYVNILSFV 147
Query: 126 DKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELRE 185
DK L+ G V L+ T +++ L EVDPLV M E +Y+ IGGL QI+E++E
Sbjct: 148 DKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSVMKVEKAPLESYADIGGLESQIQEIKE 207
Query: 186 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 239
+ELPL +PEL++ +GI PPKG +LYGPPGTGKTLLA+AVA++ A FL+VV S
Sbjct: 208 AVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGS 261
Score = 67 (28.6 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 16/32 (50%), Positives = 18/32 (56%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 495
TEAGL A+R R +TQ D KA K KK
Sbjct: 408 TEAGLLALRERRMKITQADLRKARDKALFQKK 439
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 103/189 (54%), Positives = 145/189 (76%)
Query: 496 LESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 554
LES++ + K +ELPL +PEL++ +GI PPKG +LYGPPGTGKTLLA+AVA++ A FL+
Sbjct: 198 LESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLR 257
Query: 555 VVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 614
VV S ++ KY+G+ +L+REMF A H P I+F+DEIDA+G +R+ + +REIQRT+
Sbjct: 258 VVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGEREIQRTM 317
Query: 615 MELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+ELLNQ+DGFDS G VK+IMATNR D+LDPAL+RPGR+DRKI++P P+ + + I +IH
Sbjct: 318 LELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHT 377
Query: 675 GPIAKHGEI 683
+ ++
Sbjct: 378 SKMTMSPDV 386
Score = 467 (169.5 bits), Expect = 6.0e-75, Sum P(2) = 6.0e-75
Identities = 90/200 (45%), Positives = 127/200 (63%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + T+ S ++ KY+G+ +L+REMF A H P I+F+DEIDA+G +R
Sbjct: 243 LAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKR 302
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR D+LDPAL+RPGR+DRKI++P
Sbjct: 303 YEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLP 362
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
P+ + + IH + ++D E V D +GAD++ +CTEAGL A+R R
Sbjct: 363 NPDTKTKRRI---FQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERR 419
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
+TQ D KA K KK
Sbjct: 420 MKITQADLRKARDKALFQKK 439
Score = 317 (116.6 bits), Expect = 6.0e-75, Sum P(2) = 6.0e-75
Identities = 77/174 (44%), Positives = 108/174 (62%)
Query: 69 REQLKELT-KQYDKSE-NDLKALQ-SVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRRQL 125
+EQ+K K Y K + +DL+ SVG +L + + +I + GP Y V +
Sbjct: 91 QEQIKSSDDKNYVKLKIDDLRGSPVSVG--TLEELIDENHGIIATSV-GPEYYVNILSFV 147
Query: 126 DKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELRE 185
DK L+ G V L+ T +++ L EVDPLV M E +Y+ IGGL QI+E++E
Sbjct: 148 DKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSVMKVEKAPLESYADIGGLESQIQEIKE 207
Query: 186 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 239
+ELPL +PEL++ +GI PPKG +LYGPPGTGKTLLA+AVA++ A FL+VV S
Sbjct: 208 AVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGS 261
Score = 67 (28.6 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 16/32 (50%), Positives = 18/32 (56%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 495
TEAGL A+R R +TQ D KA K KK
Sbjct: 408 TEAGLLALRERRMKITQADLRKARDKALFQKK 439
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 101/179 (56%), Positives = 140/179 (78%)
Query: 496 LESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 554
LE+++ + K +ELPL +PEL++ +GI PPKG +LYG PGTGKTLLA+AVA+ A FL+
Sbjct: 193 LEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLR 252
Query: 555 VVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 614
VV S ++ KY+G+ +L+RE+F A + P I+F+DEIDA+G +R+ + +REIQRT+
Sbjct: 253 VVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGEREIQRTM 312
Query: 615 MELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
+ELLNQ+DGFDS G VK+I+ATNR ++LDPALLRPGR+DRKIE PLP+ + R I +IH
Sbjct: 313 LELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIH 371
Score = 467 (169.5 bits), Expect = 9.8e-75, Sum P(2) = 9.8e-75
Identities = 91/189 (48%), Positives = 126/189 (66%)
Query: 267 TYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI 326
T+ S ++ KY+G+ +L+RE+F A + P I+F+DEIDA+G +R+ + +REI
Sbjct: 249 TFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGEREI 308
Query: 327 QRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHT 386
QRT++ELLNQ+DGFDS G VK+I+ATNR ++LDPALLRPGR+DRKIE PLP+ + R
Sbjct: 309 QRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRI- 367
Query: 387 WPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKA 446
IH + +++ E V D F+GAD++ +CTEAGL A+R R VT DF KA
Sbjct: 368 --FQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHVDFKKA 425
Query: 447 VRKVSDNKK 455
KV KK
Sbjct: 426 KEKVMFKKK 434
Score = 315 (115.9 bits), Expect = 9.8e-75, Sum P(2) = 9.8e-75
Identities = 75/175 (42%), Positives = 110/175 (62%)
Query: 69 REQLK--ELTKQYDKSE-NDLKAL-QSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRRQ 124
+E+LK E + D+S+ +DL+ SVG +L + + IV ++ GP Y VG
Sbjct: 85 QERLKPQEEKAEEDRSKVDDLRGTPMSVG--NLEELIDENHA-IVSSSVGPEYYVGILSF 141
Query: 125 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 184
+DK +L+ G + + L+++ L EVDP+V M E +Y+ IGGL QI+E++
Sbjct: 142 VDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIK 201
Query: 185 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 239
E +ELPL +PEL++ +GI PPKG +LYG PGTGKTLLA+AVA+ A FL+VV S
Sbjct: 202 EAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGS 256
Score = 79 (32.9 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 23/77 (29%), Positives = 35/77 (45%)
Query: 419 LRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYV 478
L ++ T +F I + + + ++ ++ D + TEAGL A+R R V
Sbjct: 358 LPDIKTRRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKV 417
Query: 479 TQEDFMKAVRKVSDNKK 495
T DF KA KV KK
Sbjct: 418 THVDFKKAKEKVMFKKK 434
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 101/179 (56%), Positives = 140/179 (78%)
Query: 496 LESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 554
LE+++ + K +ELPL +PEL++ +GI PPKG +LYG PGTGKTLLA+AVA+ A FL+
Sbjct: 193 LEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLR 252
Query: 555 VVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 614
VV S ++ KY+G+ +L+RE+F A + P I+F+DEIDA+G +R+ + +REIQRT+
Sbjct: 253 VVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM 312
Query: 615 MELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
+ELLNQ+DGFDS G VK+I+ATNR ++LDPALLRPGR+DRKIE PLP+ + R I +IH
Sbjct: 313 LELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIH 371
Score = 467 (169.5 bits), Expect = 9.8e-75, Sum P(2) = 9.8e-75
Identities = 91/189 (48%), Positives = 126/189 (66%)
Query: 267 TYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI 326
T+ S ++ KY+G+ +L+RE+F A + P I+F+DEIDA+G +R+ + +REI
Sbjct: 249 TFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREI 308
Query: 327 QRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHT 386
QRT++ELLNQ+DGFDS G VK+I+ATNR ++LDPALLRPGR+DRKIE PLP+ + R
Sbjct: 309 QRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRI- 367
Query: 387 WPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKA 446
IH + +++ E V D F+GAD++ +CTEAGL A+R R VT DF KA
Sbjct: 368 --FQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKKA 425
Query: 447 VRKVSDNKK 455
KV KK
Sbjct: 426 KEKVMFKKK 434
Score = 315 (115.9 bits), Expect = 9.8e-75, Sum P(2) = 9.8e-75
Identities = 75/175 (42%), Positives = 110/175 (62%)
Query: 69 REQLK--ELTKQYDKSE-NDLKAL-QSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRRQ 124
+E+LK E + D+S+ +DL+ SVG +L + + IV ++ GP Y VG
Sbjct: 85 QERLKPQEEKAEEDRSKVDDLRGTPMSVG--NLEELIDENHA-IVSSSVGPEYYVGILSF 141
Query: 125 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 184
+DK +L+ G + + L+++ L EVDP+V M E +Y+ IGGL QI+E++
Sbjct: 142 VDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIK 201
Query: 185 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 239
E +ELPL +PEL++ +GI PPKG +LYG PGTGKTLLA+AVA+ A FL+VV S
Sbjct: 202 EAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGS 256
Score = 81 (33.6 bits), Expect = 8.0e-31, Sum P(2) = 8.0e-31
Identities = 23/77 (29%), Positives = 36/77 (46%)
Query: 419 LRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYV 478
L ++ T +F I + + ++++ ++ D + TEAGL A+R R V
Sbjct: 358 LPDIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKV 417
Query: 479 TQEDFMKAVRKVSDNKK 495
T DF KA KV KK
Sbjct: 418 THPDFKKAKEKVMFKKK 434
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 520 (188.1 bits), Expect = 1.9e-53, Sum P(2) = 1.9e-53
Identities = 101/170 (59%), Positives = 128/170 (75%)
Query: 499 KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 558
K + + +ELPL + EL++++GI PP+G L+YGPPG GKT+LA+AVA A F++VV S
Sbjct: 174 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 233
Query: 559 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 618
V KY+GE R++R++F A+ + P IIF+DEIDAI +RF T ADRE+QR L+ELL
Sbjct: 234 EFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELL 293
Query: 619 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE-QARL 667
NQMDGFD VK+IMATNR DTLDPALL PGRLDRKIE PLP+ Q RL
Sbjct: 294 NQMDGFDQNVNVKVIMATNRADTLDPALLCPGRLDRKIEFPLPDRRQKRL 343
Score = 460 (167.0 bits), Expect = 1.2e-74, Sum P(2) = 1.2e-74
Identities = 97/204 (47%), Positives = 124/204 (60%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + HH + S V KY+GE R++R++F A+ + P IIF+DEIDAI +R
Sbjct: 215 LAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR 274
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F T ADRE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALL PGRLDRKIE P
Sbjct: 275 FDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLCPGRLDRKIEFP 334
Query: 376 LPNE-QARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE 434
LP+ Q RL S + E+D E V D +GAD+ ++C EAG+ A+R
Sbjct: 335 LPDRRQKRLV----FSTITSKMNLSEEVDLEDYVARPDKISGADINSICQEAGMLAVREN 390
Query: 435 REYVTQEDFMKAVRKVSDNKKLDH 458
R V +DF KA + V + +H
Sbjct: 391 RYIVLAKDFEKAYKTVIKKDEQEH 414
Score = 322 (118.4 bits), Expect = 1.2e-74, Sum P(2) = 1.2e-74
Identities = 74/209 (35%), Positives = 122/209 (58%)
Query: 36 EQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQV 95
E L++L Y K + +L+ L+ ++ ++++ K L K++ ++ ++K +QS+ V
Sbjct: 35 EDLEDLYSIYKKLQQELEFLEVQEEY------IKDEQKNLKKEFLHAQEEVKRIQSIPLV 88
Query: 96 --SLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREV 153
+V + T IV +T G Y V +D+ LK VAL + ++ LP E
Sbjct: 89 IGQFLEAVDQN-TAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEA 147
Query: 154 DPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGP 213
D + ++ + D+ YS IGG+ Q +E+RE +ELPL + EL++++GI PP+G L+YGP
Sbjct: 148 DSSIMMLTSDQKPDVLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGP 207
Query: 214 PGTGKTLLARAVASQLDANFLKVVSSLFV 242
PG GKT+LA+AVA A F++VV S FV
Sbjct: 208 PGCGKTMLAKAVAHHTTAAFIRVVGSEFV 236
Score = 71 (30.1 bits), Expect = 6.4e-33, Sum P(2) = 6.4e-33
Identities = 24/68 (35%), Positives = 33/68 (48%)
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 495
E V ED++ K+S D NS EAG+ A+R R V +DF KA + V +
Sbjct: 356 EEVDLEDYVARPDKISG---AD-INSICQEAGMLAVRENRYIVLAKDFEKAYKTVIKKDE 411
Query: 496 LESKLDYK 503
E + YK
Sbjct: 412 QEHEF-YK 418
Score = 51 (23.0 bits), Expect = 1.9e-53, Sum P(2) = 1.9e-53
Identities = 11/41 (26%), Positives = 26/41 (63%)
Query: 19 KKLTEHAE-VEGRLREMREQLKELTKQYDKSENDLKALQSV 58
KKL + E +E + ++++ K L K++ ++ ++K +QS+
Sbjct: 45 KKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSI 85
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 405 (147.6 bits), Expect = 4.0e-74, Sum P(3) = 4.0e-74
Identities = 81/173 (46%), Positives = 114/173 (65%)
Query: 499 KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 558
+++ I P+ PEL+ +VGI P G L++GPPG GKTLLA+AVA++ ANF+ +
Sbjct: 531 RMELHMCIVQPIKKPELYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGP 590
Query: 559 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 618
+++KY+GES + +R++F AR PCIIF DE+DA+ RR TS R + LL
Sbjct: 591 ELLNKYVGESEKAVRQVFQRARASTPCIIFFDELDALVPRR---DTSMSESSSRVVNTLL 647
Query: 619 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
++DG + V +I ATNRPD +DPA+LRPGRLD+ + I LP + RLEILK
Sbjct: 648 TELDGLNDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEERLEILK 700
Score = 372 (136.0 bits), Expect = 7.4e-30, Sum P(2) = 7.4e-30
Identities = 79/172 (45%), Positives = 115/172 (66%)
Query: 505 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKY 564
+I LP+L+PE++ G+ PP+G LLYGPPG GKT +A A+A +L F+ + + ++V
Sbjct: 208 IIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANALAGELKVPFINISAPSVVSGM 267
Query: 565 IGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM-ELLNQMDG 623
GES + +RE+F A+ PC+IFMDEIDAI +R +G A RE+++ ++ +LL MD
Sbjct: 268 SGESEKKLREIFEEAKQIAPCLIFMDEIDAITPKR--DG-GAQREMEKRIVAQLLTLMDE 324
Query: 624 F--DSLG--QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
+ G V +I ATNRPD+LD AL R GR DR+I + +PNE+ R+ ILK
Sbjct: 325 LTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLNVPNEEQRISILK 376
Score = 296 (109.3 bits), Expect = 9.6e-39, Sum P(2) = 9.6e-39
Identities = 84/237 (35%), Positives = 129/237 (54%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
+++KY+GES + +R++F AR PCIIF DE+DA+ RR TS R + LL
Sbjct: 592 LLNKYVGESEKAVRQVFQRARASTPCIIFFDELDALVPRR---DTSMSESSSRVVNTLLT 648
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK--IEIPLPNEQARLAHTWPISIHA 393
++DG + V +I ATNRPD +DPA+LRPGRLD+ IE+P P E+ + T +
Sbjct: 649 ELDGLNDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEERLEILKTL-VRTSN 707
Query: 394 GPIAKHGEIDYEAVVKLS--DSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVS 451
P+ H +D A+ + S +F+GADL ++ EAG++A++ +R + Q K+
Sbjct: 708 SPL--HANVDLNAISRDSRCGNFSGADLSSLVKEAGVWALK-KRFFQNQ--------KIQ 756
Query: 452 DNKKLDHCNSYRTEAGLFAIRSEREYVTQEDF---MKAVR-KVSDNKKLE-SKLDYK 503
+ LD Y G I +T EDF + ++R VSD ++ KL+ K
Sbjct: 757 E---LDSSGFYEDSIGEDDIS-----ITAEDFDHALSSIRPSVSDRDRMRYEKLNKK 805
Score = 262 (97.3 bits), Expect = 4.0e-74, Sum P(3) = 4.0e-74
Identities = 70/196 (35%), Positives = 115/196 (58%)
Query: 264 LEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSAD 323
L+ + + ++V GES + +RE+F A+ PC+IFMDEIDAI +R +G A
Sbjct: 251 LKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITPKR--DG-GAQ 307
Query: 324 REIQRTLM-ELLNQMDGF--DSLG--QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPN 378
RE+++ ++ +LL MD + G V +I ATNRPD+LD AL R GR DR+I + +PN
Sbjct: 308 REMEKRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLNVPN 367
Query: 379 EQARLAHTWPISIHAGPIAKHGE-IDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY 437
E+ R++ ++ + ++GE +Y + KL+ + GADL+++ T AG+ AI+ R +
Sbjct: 368 EEQRISILKAMTKNIK--LENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAIK--RIF 423
Query: 438 VTQEDFMKAVRKVSDN 453
T + + V D+
Sbjct: 424 ETMSELQEESHSVKDD 439
Score = 203 (76.5 bits), Expect = 4.0e-74, Sum P(3) = 4.0e-74
Identities = 64/211 (30%), Positives = 106/211 (50%)
Query: 33 EMRE-QLKELTKQYDKSENDLKA-LQSVGQHDLLLHCVREQL--KELTKQYDKS-ENDLK 87
+M++ QLK + K Y E + A L+ + Q + RE E + DK ENDL
Sbjct: 62 QMKDFQLKRMKKNY--LEKSIAASLKVIRQDETEEFGDRENGIGDESEAENDKECENDLM 119
Query: 88 ALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCR--RQLDKAKLKSGTRVALDMTTLTI 145
++ +++ SV W + T+G V +Q D +L G + + T
Sbjct: 120 EVKDSN--AINKSVVSLWNQ--EKTDGESDGVNNEEGQQADTTELLKGNKRKAKGSAKTQ 175
Query: 146 MRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPP 205
++ R++D + P +I S++GG+ +L E+I LP+L+PE++ G+ PP
Sbjct: 176 LKKQKRKID-------YSTP-NIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPP 227
Query: 206 KGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
+G LLYGPPG GKT +A A+A +L F+ +
Sbjct: 228 RGVLLYGPPGCGKTTIANALAGELKVPFINI 258
Score = 172 (65.6 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 61/220 (27%), Positives = 99/220 (45%)
Query: 19 KKLTEHAEVE-GRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQLKELTK 77
K +T++ ++E G RE L +LT Y + DLK+L + + + E + EL +
Sbjct: 376 KAMTKNIKLENGEHFNYRE-LSKLTPGYVGA--DLKSLVTAAGISAIKR-IFETMSELQE 431
Query: 78 QYDKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRY-VVGCRRQLDKAKLKSGTRV 136
+ ++D VSL + + + + + + L
Sbjct: 432 ESHSVKDDS---MDADPVSLDANKEDMIKKFEQKSEAEKLSTIKKFLNMHPDPLNQEQLA 488
Query: 137 ALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPEL 196
L +T + LP V P D+T+ +G L + EL I P+ PEL
Sbjct: 489 PLAITYQDFVNALP-SVQPSAKREGFATIPDVTWQNVGALFKIRMELHMCIVQPIKKPEL 547
Query: 197 FQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
+ +VGI P G L++GPPG GKTLLA+AVA++ ANF+ +
Sbjct: 548 YLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISI 587
Score = 37 (18.1 bits), Expect = 9.7e-57, Sum P(3) = 9.7e-57
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 224 AVASQLDANFLKVVSSLFVTSKEDMA-ILMGN-QLKRRSTHHLEKT 267
A A + F + SS +T + +A + M + QLKR ++LEK+
Sbjct: 34 ATADEEHDPFSCMASSHNLTVSQVLAYVQMKDFQLKRMKKNYLEKS 79
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 405 (147.6 bits), Expect = 4.0e-74, Sum P(3) = 4.0e-74
Identities = 81/173 (46%), Positives = 114/173 (65%)
Query: 499 KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 558
+++ I P+ PEL+ +VGI P G L++GPPG GKTLLA+AVA++ ANF+ +
Sbjct: 531 RMELHMCIVQPIKKPELYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGP 590
Query: 559 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 618
+++KY+GES + +R++F AR PCIIF DE+DA+ RR TS R + LL
Sbjct: 591 ELLNKYVGESEKAVRQVFQRARASTPCIIFFDELDALVPRR---DTSMSESSSRVVNTLL 647
Query: 619 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
++DG + V +I ATNRPD +DPA+LRPGRLD+ + I LP + RLEILK
Sbjct: 648 TELDGLNDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEERLEILK 700
Score = 372 (136.0 bits), Expect = 7.4e-30, Sum P(2) = 7.4e-30
Identities = 79/172 (45%), Positives = 115/172 (66%)
Query: 505 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKY 564
+I LP+L+PE++ G+ PP+G LLYGPPG GKT +A A+A +L F+ + + ++V
Sbjct: 208 IIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANALAGELKVPFINISAPSVVSGM 267
Query: 565 IGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM-ELLNQMDG 623
GES + +RE+F A+ PC+IFMDEIDAI +R +G A RE+++ ++ +LL MD
Sbjct: 268 SGESEKKLREIFEEAKQIAPCLIFMDEIDAITPKR--DG-GAQREMEKRIVAQLLTLMDE 324
Query: 624 F--DSLG--QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
+ G V +I ATNRPD+LD AL R GR DR+I + +PNE+ R+ ILK
Sbjct: 325 LTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLNVPNEEQRISILK 376
Score = 296 (109.3 bits), Expect = 9.6e-39, Sum P(2) = 9.6e-39
Identities = 84/237 (35%), Positives = 129/237 (54%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
+++KY+GES + +R++F AR PCIIF DE+DA+ RR TS R + LL
Sbjct: 592 LLNKYVGESEKAVRQVFQRARASTPCIIFFDELDALVPRR---DTSMSESSSRVVNTLLT 648
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK--IEIPLPNEQARLAHTWPISIHA 393
++DG + V +I ATNRPD +DPA+LRPGRLD+ IE+P P E+ + T +
Sbjct: 649 ELDGLNDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEERLEILKTL-VRTSN 707
Query: 394 GPIAKHGEIDYEAVVKLS--DSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVS 451
P+ H +D A+ + S +F+GADL ++ EAG++A++ +R + Q K+
Sbjct: 708 SPL--HANVDLNAISRDSRCGNFSGADLSSLVKEAGVWALK-KRFFQNQ--------KIQ 756
Query: 452 DNKKLDHCNSYRTEAGLFAIRSEREYVTQEDF---MKAVR-KVSDNKKLE-SKLDYK 503
+ LD Y G I +T EDF + ++R VSD ++ KL+ K
Sbjct: 757 E---LDSSGFYEDSIGEDDIS-----ITAEDFDHALSSIRPSVSDRDRMRYEKLNKK 805
Score = 262 (97.3 bits), Expect = 4.0e-74, Sum P(3) = 4.0e-74
Identities = 70/196 (35%), Positives = 115/196 (58%)
Query: 264 LEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSAD 323
L+ + + ++V GES + +RE+F A+ PC+IFMDEIDAI +R +G A
Sbjct: 251 LKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITPKR--DG-GAQ 307
Query: 324 REIQRTLM-ELLNQMDGF--DSLG--QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPN 378
RE+++ ++ +LL MD + G V +I ATNRPD+LD AL R GR DR+I + +PN
Sbjct: 308 REMEKRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLNVPN 367
Query: 379 EQARLAHTWPISIHAGPIAKHGE-IDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY 437
E+ R++ ++ + ++GE +Y + KL+ + GADL+++ T AG+ AI+ R +
Sbjct: 368 EEQRISILKAMTKNIK--LENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAIK--RIF 423
Query: 438 VTQEDFMKAVRKVSDN 453
T + + V D+
Sbjct: 424 ETMSELQEESHSVKDD 439
Score = 203 (76.5 bits), Expect = 4.0e-74, Sum P(3) = 4.0e-74
Identities = 64/211 (30%), Positives = 106/211 (50%)
Query: 33 EMRE-QLKELTKQYDKSENDLKA-LQSVGQHDLLLHCVREQL--KELTKQYDKS-ENDLK 87
+M++ QLK + K Y E + A L+ + Q + RE E + DK ENDL
Sbjct: 62 QMKDFQLKRMKKNY--LEKSIAASLKVIRQDETEEFGDRENGIGDESEAENDKECENDLM 119
Query: 88 ALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCR--RQLDKAKLKSGTRVALDMTTLTI 145
++ +++ SV W + T+G V +Q D +L G + + T
Sbjct: 120 EVKDSN--AINKSVVSLWNQ--EKTDGESDGVNNEEGQQADTTELLKGNKRKAKGSAKTQ 175
Query: 146 MRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPP 205
++ R++D + P +I S++GG+ +L E+I LP+L+PE++ G+ PP
Sbjct: 176 LKKQKRKID-------YSTP-NIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPP 227
Query: 206 KGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
+G LLYGPPG GKT +A A+A +L F+ +
Sbjct: 228 RGVLLYGPPGCGKTTIANALAGELKVPFINI 258
Score = 172 (65.6 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 61/220 (27%), Positives = 99/220 (45%)
Query: 19 KKLTEHAEVE-GRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQLKELTK 77
K +T++ ++E G RE L +LT Y + DLK+L + + + E + EL +
Sbjct: 376 KAMTKNIKLENGEHFNYRE-LSKLTPGYVGA--DLKSLVTAAGISAIKR-IFETMSELQE 431
Query: 78 QYDKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRY-VVGCRRQLDKAKLKSGTRV 136
+ ++D VSL + + + + + + L
Sbjct: 432 ESHSVKDDS---MDADPVSLDANKEDMIKKFEQKSEAEKLSTIKKFLNMHPDPLNQEQLA 488
Query: 137 ALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPEL 196
L +T + LP V P D+T+ +G L + EL I P+ PEL
Sbjct: 489 PLAITYQDFVNALP-SVQPSAKREGFATIPDVTWQNVGALFKIRMELHMCIVQPIKKPEL 547
Query: 197 FQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
+ +VGI P G L++GPPG GKTLLA+AVA++ ANF+ +
Sbjct: 548 YLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISI 587
Score = 37 (18.1 bits), Expect = 9.7e-57, Sum P(3) = 9.7e-57
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 224 AVASQLDANFLKVVSSLFVTSKEDMA-ILMGN-QLKRRSTHHLEKT 267
A A + F + SS +T + +A + M + QLKR ++LEK+
Sbjct: 34 ATADEEHDPFSCMASSHNLTVSQVLAYVQMKDFQLKRMKKNYLEKS 79
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 105/174 (60%), Positives = 132/174 (75%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ K VIELP+ +PELF+ +GI PKG +LYGPPGTGKTLLARAVA D F++V + +
Sbjct: 159 EIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAEL 218
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V KYIGE +R++RE+F AR H P IIFMDEID+IG R D E+QRT++ELLNQ
Sbjct: 219 VQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQ 278
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+DGF++ +K+IMATNR D LDPALLRPGR+DRKIE P P+ AR EIL+IH+
Sbjct: 279 LDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHS 332
Score = 463 (168.0 bits), Expect = 4.7e-74, Sum P(2) = 4.7e-74
Identities = 98/199 (49%), Positives = 130/199 (65%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH + + + +V KYIGE +R++RE+F AR H P IIFMDEID+IG R
Sbjct: 198 LARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTR 257
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
D E+QRT++ELLNQ+DGF++ +K+IMATNR D LDPALLRPGR+DRKIE P
Sbjct: 258 VEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFP 317
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
P+ AR A + IH+ + I+ V + + +GAD++ VCTEAG++A+R R
Sbjct: 318 PPSVAAR-AEI--LRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERR 374
Query: 436 EYVTQEDFMKAVRKVSDNK 454
+VTQEDF AV KV NK
Sbjct: 375 IHVTQEDFELAVGKVM-NK 392
Score = 313 (115.2 bits), Expect = 4.7e-74, Sum P(2) = 4.7e-74
Identities = 78/192 (40%), Positives = 112/192 (58%)
Query: 49 ENDLKALQSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQS----VGQVSLSTSVSKC 104
E +LK ++S ++ L R L + + + K E L+ LQ VG+V S K
Sbjct: 29 ETELK-IRSKTENVRRLEAQRNALNDKVR-FIKDE--LRLLQEPGSYVGEVIKIVSDKK- 83
Query: 105 WTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHED 164
V+VK +Y+V + ++ LK+ RV L + + + L + DPLV M E
Sbjct: 84 --VLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEK 141
Query: 165 PGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARA 224
D TY +GGL++QI+E++EVIELP+ +PELF+ +GI PKG +LYGPPGTGKTLLARA
Sbjct: 142 VPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARA 201
Query: 225 VASQLDANFLKV 236
VA D F++V
Sbjct: 202 VAHHTDCKFIRV 213
Score = 95 (38.5 bits), Expect = 1.8e-34, Sum P(2) = 1.8e-34
Identities = 28/81 (34%), Positives = 42/81 (51%)
Query: 421 NVCTEAGLFAIRSEREYVTQE-DFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVT 479
+V A + I S + +T+ + K K++ D TEAG++A+R R +VT
Sbjct: 320 SVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGAD-VKGVCTEAGMYALRERRIHVT 378
Query: 480 QEDFMKAVRKVSDNKKLESKL 500
QEDF AV KV NK E+ +
Sbjct: 379 QEDFELAVGKVM-NKNQETAI 398
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 109/198 (55%), Positives = 150/198 (75%)
Query: 478 VTQEDFMKAVRKV-SDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGT 535
VT KA ++ +D L++++ + K +ELPL +PE ++ +GI PPKG +LYGPPGT
Sbjct: 170 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 229
Query: 536 GKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI 595
GKTLLA+AVA+Q A FL+VV S ++ KY+G+ +L+RE+F A H P I+F+DEIDAI
Sbjct: 230 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 289
Query: 596 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 655
G +R+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRK
Sbjct: 290 GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRK 349
Query: 656 IEIPLPNEQARLEILKIH 673
IE PLP+E+ + I +IH
Sbjct: 350 IEFPLPDEKTKKRIFQIH 367
Score = 475 (172.3 bits), Expect = 5.6e-74, Sum P(2) = 5.6e-74
Identities = 90/200 (45%), Positives = 129/200 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + T+ S ++ KY+G+ +L+RE+F A H P I+F+DEIDAIG +R
Sbjct: 234 LAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 293
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRKIE P
Sbjct: 294 YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFP 353
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LP+E+ + IH + ++ + ++ D +GAD++ +CTEAGL A+R R
Sbjct: 354 LPDEKTKKRI---FQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERR 410
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
VT EDF K+ V K+
Sbjct: 411 MKVTNEDFKKSKENVLYKKQ 430
Score = 299 (110.3 bits), Expect = 5.6e-74, Sum P(2) = 5.6e-74
Identities = 69/173 (39%), Positives = 102/173 (58%)
Query: 69 REQLKELTKQYDKSENDLKALQSVGQVSLST--SVSKCWTVIVKATNGPRYVVGCRRQLD 126
+EQ+K L ++ ++ + + L+ +S+ T + IV + G + V +D
Sbjct: 81 QEQMKPLEEKQEEERSKVDDLRGT-PMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVD 139
Query: 127 KAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREV 186
K L+ G V L+ ++ L + DPLV M E TY+ IGGL QI+E++E
Sbjct: 140 KDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKES 199
Query: 187 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 239
+ELPL +PE ++ +GI PPKG +LYGPPGTGKTLLA+AVA+Q A FL+VV S
Sbjct: 200 VELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGS 252
Score = 75 (31.5 bits), Expect = 7.6e-28, Sum P(2) = 7.6e-28
Identities = 21/72 (29%), Positives = 33/72 (45%)
Query: 424 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDF 483
T+ +F I + R + + + + D+ + TEAGL A+R R VT EDF
Sbjct: 359 TKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 418
Query: 484 MKAVRKVSDNKK 495
K+ V K+
Sbjct: 419 KKSKENVLYKKQ 430
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 109/198 (55%), Positives = 150/198 (75%)
Query: 478 VTQEDFMKAVRKV-SDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGT 535
VT KA ++ +D L++++ + K +ELPL +PE ++ +GI PPKG +LYGPPGT
Sbjct: 169 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 228
Query: 536 GKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI 595
GKTLLA+AVA+Q A FL+VV S ++ KY+G+ +L+RE+F A H P I+F+DEIDAI
Sbjct: 229 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 288
Query: 596 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 655
G +R+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRK
Sbjct: 289 GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRK 348
Query: 656 IEIPLPNEQARLEILKIH 673
IE PLP+E+ + I +IH
Sbjct: 349 IEFPLPDEKTKKRIFQIH 366
Score = 475 (172.3 bits), Expect = 5.6e-74, Sum P(2) = 5.6e-74
Identities = 90/200 (45%), Positives = 129/200 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + T+ S ++ KY+G+ +L+RE+F A H P I+F+DEIDAIG +R
Sbjct: 233 LAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 292
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRKIE P
Sbjct: 293 YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFP 352
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LP+E+ + IH + ++ + ++ D +GAD++ +CTEAGL A+R R
Sbjct: 353 LPDEKTKKRI---FQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERR 409
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
VT EDF K+ V K+
Sbjct: 410 MKVTNEDFKKSKENVLYKKQ 429
Score = 299 (110.3 bits), Expect = 5.6e-74, Sum P(2) = 5.6e-74
Identities = 69/173 (39%), Positives = 102/173 (58%)
Query: 69 REQLKELTKQYDKSENDLKALQSVGQVSLST--SVSKCWTVIVKATNGPRYVVGCRRQLD 126
+EQ+K L ++ ++ + + L+ +S+ T + IV + G + V +D
Sbjct: 80 QEQMKPLEEKQEEERSKVDDLRGT-PMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVD 138
Query: 127 KAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREV 186
K L+ G V L+ ++ L + DPLV M E TY+ IGGL QI+E++E
Sbjct: 139 KDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKES 198
Query: 187 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 239
+ELPL +PE ++ +GI PPKG +LYGPPGTGKTLLA+AVA+Q A FL+VV S
Sbjct: 199 VELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGS 251
Score = 75 (31.5 bits), Expect = 7.2e-28, Sum P(2) = 7.2e-28
Identities = 21/72 (29%), Positives = 33/72 (45%)
Query: 424 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDF 483
T+ +F I + R + + + + D+ + TEAGL A+R R VT EDF
Sbjct: 358 TKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 417
Query: 484 MKAVRKVSDNKK 495
K+ V K+
Sbjct: 418 KKSKENVLYKKQ 429
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 109/198 (55%), Positives = 150/198 (75%)
Query: 478 VTQEDFMKAVRKV-SDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGT 535
VT KA ++ +D L++++ + K +ELPL +PE ++ +GI PPKG +LYGPPGT
Sbjct: 171 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 536 GKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI 595
GKTLLA+AVA+Q A FL+VV S ++ KY+G+ +L+RE+F A H P I+F+DEIDAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 596 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 655
G +R+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRK
Sbjct: 291 GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRK 350
Query: 656 IEIPLPNEQARLEILKIH 673
IE PLP+E+ + I +IH
Sbjct: 351 IEFPLPDEKTKKRIFQIH 368
Score = 474 (171.9 bits), Expect = 7.3e-74, Sum P(2) = 7.3e-74
Identities = 90/200 (45%), Positives = 129/200 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + T+ S ++ KY+G+ +L+RE+F A H P I+F+DEIDAIG +R
Sbjct: 235 LAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRKIE P
Sbjct: 295 YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFP 354
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LP+E+ + IH + ++ + ++ D +GAD++ +CTEAGL A+R R
Sbjct: 355 LPDEKTKKRI---FQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERR 411
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
VT EDF K+ V K+
Sbjct: 412 MKVTNEDFKKSKENVLYKKQ 431
Score = 299 (110.3 bits), Expect = 7.3e-74, Sum P(2) = 7.3e-74
Identities = 69/173 (39%), Positives = 102/173 (58%)
Query: 69 REQLKELTKQYDKSENDLKALQSVGQVSLST--SVSKCWTVIVKATNGPRYVVGCRRQLD 126
+EQ+K L ++ ++ + + L+ +S+ T + IV + G + V +D
Sbjct: 82 QEQMKPLEEKQEEERSKVDDLRGT-PMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVD 140
Query: 127 KAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREV 186
K L+ G V L+ ++ L + DPLV M E TY+ IGGL QI+E++E
Sbjct: 141 KDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKES 200
Query: 187 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 239
+ELPL +PE ++ +GI PPKG +LYGPPGTGKTLLA+AVA+Q A FL+VV S
Sbjct: 201 VELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGS 253
Score = 74 (31.1 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
Identities = 21/72 (29%), Positives = 33/72 (45%)
Query: 424 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDF 483
T+ +F I + R + + + + D+ + TEAGL A+R R VT EDF
Sbjct: 360 TKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419
Query: 484 MKAVRKVSDNKK 495
K+ V K+
Sbjct: 420 KKSKENVLYKKQ 431
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 109/198 (55%), Positives = 150/198 (75%)
Query: 478 VTQEDFMKAVRKV-SDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGT 535
VT KA ++ +D L++++ + K +ELPL +PE ++ +GI PPKG +LYGPPGT
Sbjct: 171 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 536 GKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI 595
GKTLLA+AVA+Q A FL+VV S ++ KY+G+ +L+RE+F A H P I+F+DEIDAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 596 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 655
G +R+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRK
Sbjct: 291 GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRK 350
Query: 656 IEIPLPNEQARLEILKIH 673
IE PLP+E+ + I +IH
Sbjct: 351 IEFPLPDEKTKKRIFQIH 368
Score = 474 (171.9 bits), Expect = 7.3e-74, Sum P(2) = 7.3e-74
Identities = 90/200 (45%), Positives = 129/200 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + T+ S ++ KY+G+ +L+RE+F A H P I+F+DEIDAIG +R
Sbjct: 235 LAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRKIE P
Sbjct: 295 YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFP 354
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LP+E+ + IH + ++ + ++ D +GAD++ +CTEAGL A+R R
Sbjct: 355 LPDEKTKKRI---FQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERR 411
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
VT EDF K+ V K+
Sbjct: 412 MKVTNEDFKKSKENVLYKKQ 431
Score = 299 (110.3 bits), Expect = 7.3e-74, Sum P(2) = 7.3e-74
Identities = 69/173 (39%), Positives = 102/173 (58%)
Query: 69 REQLKELTKQYDKSENDLKALQSVGQVSLST--SVSKCWTVIVKATNGPRYVVGCRRQLD 126
+EQ+K L ++ ++ + + L+ +S+ T + IV + G + V +D
Sbjct: 82 QEQMKPLEEKQEEERSKVDDLRGT-PMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVD 140
Query: 127 KAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREV 186
K L+ G V L+ ++ L + DPLV M E TY+ IGGL QI+E++E
Sbjct: 141 KDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKES 200
Query: 187 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 239
+ELPL +PE ++ +GI PPKG +LYGPPGTGKTLLA+AVA+Q A FL+VV S
Sbjct: 201 VELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGS 253
Score = 74 (31.1 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
Identities = 21/72 (29%), Positives = 33/72 (45%)
Query: 424 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDF 483
T+ +F I + R + + + + D+ + TEAGL A+R R VT EDF
Sbjct: 360 TKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419
Query: 484 MKAVRKVSDNKK 495
K+ V K+
Sbjct: 420 KKSKENVLYKKQ 431
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 109/198 (55%), Positives = 150/198 (75%)
Query: 478 VTQEDFMKAVRKV-SDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGT 535
VT KA ++ +D L++++ + K +ELPL +PE ++ +GI PPKG +LYGPPGT
Sbjct: 98 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 157
Query: 536 GKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI 595
GKTLLA+AVA+Q A FL+VV S ++ KY+G+ +L+RE+F A H P I+F+DEIDAI
Sbjct: 158 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 217
Query: 596 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 655
G +R+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRK
Sbjct: 218 GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRK 277
Query: 656 IEIPLPNEQARLEILKIH 673
IE PLP+E+ + I +IH
Sbjct: 278 IEFPLPDEKTKKRIFQIH 295
Score = 474 (171.9 bits), Expect = 7.3e-74, Sum P(2) = 7.3e-74
Identities = 90/200 (45%), Positives = 129/200 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + T+ S ++ KY+G+ +L+RE+F A H P I+F+DEIDAIG +R
Sbjct: 162 LAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 221
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRKIE P
Sbjct: 222 YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFP 281
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LP+E+ + IH + ++ + ++ D +GAD++ +CTEAGL A+R R
Sbjct: 282 LPDEKTKKRI---FQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERR 338
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
VT EDF K+ V K+
Sbjct: 339 MKVTNEDFKKSKENVLYKKQ 358
Score = 299 (110.3 bits), Expect = 7.3e-74, Sum P(2) = 7.3e-74
Identities = 69/173 (39%), Positives = 102/173 (58%)
Query: 69 REQLKELTKQYDKSENDLKALQSVGQVSLST--SVSKCWTVIVKATNGPRYVVGCRRQLD 126
+EQ+K L ++ ++ + + L+ +S+ T + IV + G + V +D
Sbjct: 9 QEQMKPLEEKQEEERSKVDDLRGT-PMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVD 67
Query: 127 KAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREV 186
K L+ G V L+ ++ L + DPLV M E TY+ IGGL QI+E++E
Sbjct: 68 KDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKES 127
Query: 187 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 239
+ELPL +PE ++ +GI PPKG +LYGPPGTGKTLLA+AVA+Q A FL+VV S
Sbjct: 128 VELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGS 180
Score = 74 (31.1 bits), Expect = 9.7e-31, Sum P(2) = 9.7e-31
Identities = 21/72 (29%), Positives = 33/72 (45%)
Query: 424 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDF 483
T+ +F I + R + + + + D+ + TEAGL A+R R VT EDF
Sbjct: 287 TKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 346
Query: 484 MKAVRKVSDNKK 495
K+ V K+
Sbjct: 347 KKSKENVLYKKQ 358
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 109/198 (55%), Positives = 150/198 (75%)
Query: 478 VTQEDFMKAVRKV-SDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGT 535
VT KA ++ +D L++++ + K +ELPL +PE ++ +GI PPKG +LYGPPGT
Sbjct: 171 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 536 GKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI 595
GKTLLA+AVA+Q A FL+VV S ++ KY+G+ +L+RE+F A H P I+F+DEIDAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 596 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 655
G +R+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRK
Sbjct: 291 GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRK 350
Query: 656 IEIPLPNEQARLEILKIH 673
IE PLP+E+ + I +IH
Sbjct: 351 IEFPLPDEKTKKRIFQIH 368
Score = 474 (171.9 bits), Expect = 7.3e-74, Sum P(2) = 7.3e-74
Identities = 90/200 (45%), Positives = 129/200 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + T+ S ++ KY+G+ +L+RE+F A H P I+F+DEIDAIG +R
Sbjct: 235 LAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRKIE P
Sbjct: 295 YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFP 354
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LP+E+ + IH + ++ + ++ D +GAD++ +CTEAGL A+R R
Sbjct: 355 LPDEKTKKRI---FQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERR 411
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
VT EDF K+ V K+
Sbjct: 412 MKVTNEDFKKSKENVLYKKQ 431
Score = 299 (110.3 bits), Expect = 7.3e-74, Sum P(2) = 7.3e-74
Identities = 69/173 (39%), Positives = 102/173 (58%)
Query: 69 REQLKELTKQYDKSENDLKALQSVGQVSLST--SVSKCWTVIVKATNGPRYVVGCRRQLD 126
+EQ+K L ++ ++ + + L+ +S+ T + IV + G + V +D
Sbjct: 82 QEQMKPLEEKQEEERSKVDDLRGT-PMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVD 140
Query: 127 KAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREV 186
K L+ G V L+ ++ L + DPLV M E TY+ IGGL QI+E++E
Sbjct: 141 KDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKES 200
Query: 187 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 239
+ELPL +PE ++ +GI PPKG +LYGPPGTGKTLLA+AVA+Q A FL+VV S
Sbjct: 201 VELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGS 253
Score = 74 (31.1 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
Identities = 21/72 (29%), Positives = 33/72 (45%)
Query: 424 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDF 483
T+ +F I + R + + + + D+ + TEAGL A+R R VT EDF
Sbjct: 360 TKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419
Query: 484 MKAVRKVSDNKK 495
K+ V K+
Sbjct: 420 KKSKENVLYKKQ 431
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 109/198 (55%), Positives = 150/198 (75%)
Query: 478 VTQEDFMKAVRKV-SDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGT 535
VT KA ++ +D L++++ + K +ELPL +PE ++ +GI PPKG +LYGPPGT
Sbjct: 171 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 536 GKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI 595
GKTLLA+AVA+Q A FL+VV S ++ KY+G+ +L+RE+F A H P I+F+DEIDAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 596 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 655
G +R+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRK
Sbjct: 291 GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRK 350
Query: 656 IEIPLPNEQARLEILKIH 673
IE PLP+E+ + I +IH
Sbjct: 351 IEFPLPDEKTKKRIFQIH 368
Score = 474 (171.9 bits), Expect = 7.3e-74, Sum P(2) = 7.3e-74
Identities = 90/200 (45%), Positives = 129/200 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + T+ S ++ KY+G+ +L+RE+F A H P I+F+DEIDAIG +R
Sbjct: 235 LAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRKIE P
Sbjct: 295 YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFP 354
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LP+E+ + IH + ++ + ++ D +GAD++ +CTEAGL A+R R
Sbjct: 355 LPDEKTKKRI---FQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERR 411
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
VT EDF K+ V K+
Sbjct: 412 MKVTNEDFKKSKENVLYKKQ 431
Score = 299 (110.3 bits), Expect = 7.3e-74, Sum P(2) = 7.3e-74
Identities = 69/173 (39%), Positives = 102/173 (58%)
Query: 69 REQLKELTKQYDKSENDLKALQSVGQVSLST--SVSKCWTVIVKATNGPRYVVGCRRQLD 126
+EQ+K L ++ ++ + + L+ +S+ T + IV + G + V +D
Sbjct: 82 QEQMKPLEEKQEEERSKVDDLRGT-PMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVD 140
Query: 127 KAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREV 186
K L+ G V L+ ++ L + DPLV M E TY+ IGGL QI+E++E
Sbjct: 141 KDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKES 200
Query: 187 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 239
+ELPL +PE ++ +GI PPKG +LYGPPGTGKTLLA+AVA+Q A FL+VV S
Sbjct: 201 VELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGS 253
Score = 74 (31.1 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
Identities = 21/72 (29%), Positives = 33/72 (45%)
Query: 424 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDF 483
T+ +F I + R + + + + D+ + TEAGL A+R R VT EDF
Sbjct: 360 TKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419
Query: 484 MKAVRKVSDNKK 495
K+ V K+
Sbjct: 420 KKSKENVLYKKQ 431
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 109/198 (55%), Positives = 150/198 (75%)
Query: 478 VTQEDFMKAVRKV-SDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGT 535
VT KA ++ +D L++++ + K +ELPL +PE ++ +GI PPKG +LYGPPGT
Sbjct: 171 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 536 GKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI 595
GKTLLA+AVA+Q A FL+VV S ++ KY+G+ +L+RE+F A H P I+F+DEIDAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 596 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 655
G +R+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRK
Sbjct: 291 GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRK 350
Query: 656 IEIPLPNEQARLEILKIH 673
IE PLP+E+ + I +IH
Sbjct: 351 IEFPLPDEKTKKRIFQIH 368
Score = 474 (171.9 bits), Expect = 7.3e-74, Sum P(2) = 7.3e-74
Identities = 90/200 (45%), Positives = 129/200 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + T+ S ++ KY+G+ +L+RE+F A H P I+F+DEIDAIG +R
Sbjct: 235 LAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRKIE P
Sbjct: 295 YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFP 354
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LP+E+ + IH + ++ + ++ D +GAD++ +CTEAGL A+R R
Sbjct: 355 LPDEKTKKRI---FQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERR 411
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
VT EDF K+ V K+
Sbjct: 412 MKVTNEDFKKSKENVLYKKQ 431
Score = 299 (110.3 bits), Expect = 7.3e-74, Sum P(2) = 7.3e-74
Identities = 69/173 (39%), Positives = 102/173 (58%)
Query: 69 REQLKELTKQYDKSENDLKALQSVGQVSLST--SVSKCWTVIVKATNGPRYVVGCRRQLD 126
+EQ+K L ++ ++ + + L+ +S+ T + IV + G + V +D
Sbjct: 82 QEQMKPLEEKQEEERSKVDDLRGT-PMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVD 140
Query: 127 KAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREV 186
K L+ G V L+ ++ L + DPLV M E TY+ IGGL QI+E++E
Sbjct: 141 KDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKES 200
Query: 187 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 239
+ELPL +PE ++ +GI PPKG +LYGPPGTGKTLLA+AVA+Q A FL+VV S
Sbjct: 201 VELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGS 253
Score = 74 (31.1 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
Identities = 21/72 (29%), Positives = 33/72 (45%)
Query: 424 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDF 483
T+ +F I + R + + + + D+ + TEAGL A+R R VT EDF
Sbjct: 360 TKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419
Query: 484 MKAVRKVSDNKK 495
K+ V K+
Sbjct: 420 KKSKENVLYKKQ 431
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 109/198 (55%), Positives = 150/198 (75%)
Query: 478 VTQEDFMKAVRKV-SDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGT 535
VT KA ++ +D L++++ + K +ELPL +PE ++ +GI PPKG +LYGPPGT
Sbjct: 171 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 536 GKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI 595
GKTLLA+AVA+Q A FL+VV S ++ KY+G+ +L+RE+F A H P I+F+DEIDAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 596 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 655
G +R+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRK
Sbjct: 291 GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRK 350
Query: 656 IEIPLPNEQARLEILKIH 673
IE PLP+E+ + I +IH
Sbjct: 351 IEFPLPDEKTKKRIFQIH 368
Score = 474 (171.9 bits), Expect = 7.3e-74, Sum P(2) = 7.3e-74
Identities = 90/200 (45%), Positives = 129/200 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + T+ S ++ KY+G+ +L+RE+F A H P I+F+DEIDAIG +R
Sbjct: 235 LAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRKIE P
Sbjct: 295 YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFP 354
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LP+E+ + IH + ++ + ++ D +GAD++ +CTEAGL A+R R
Sbjct: 355 LPDEKTKKRI---FQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERR 411
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
VT EDF K+ V K+
Sbjct: 412 MKVTNEDFKKSKENVLYKKQ 431
Score = 299 (110.3 bits), Expect = 7.3e-74, Sum P(2) = 7.3e-74
Identities = 69/173 (39%), Positives = 102/173 (58%)
Query: 69 REQLKELTKQYDKSENDLKALQSVGQVSLST--SVSKCWTVIVKATNGPRYVVGCRRQLD 126
+EQ+K L ++ ++ + + L+ +S+ T + IV + G + V +D
Sbjct: 82 QEQMKPLEEKQEEERSKVDDLRGT-PMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVD 140
Query: 127 KAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREV 186
K L+ G V L+ ++ L + DPLV M E TY+ IGGL QI+E++E
Sbjct: 141 KDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKES 200
Query: 187 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 239
+ELPL +PE ++ +GI PPKG +LYGPPGTGKTLLA+AVA+Q A FL+VV S
Sbjct: 201 VELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGS 253
Score = 74 (31.1 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
Identities = 21/72 (29%), Positives = 33/72 (45%)
Query: 424 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDF 483
T+ +F I + R + + + + D+ + TEAGL A+R R VT EDF
Sbjct: 360 TKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419
Query: 484 MKAVRKVSDNKK 495
K+ V K+
Sbjct: 420 KKSKENVLYKKQ 431
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 108/198 (54%), Positives = 149/198 (75%)
Query: 478 VTQEDFMKAVRKV-SDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGT 535
VT KA ++ +D L++++ + K +ELPL +PE ++ +GI PPKG +LYGPPGT
Sbjct: 170 VTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 229
Query: 536 GKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI 595
GKTLLA+AVA+Q A FL+VV S ++ KY+G+ +L+RE+F A H P I+F+DEIDA+
Sbjct: 230 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAV 289
Query: 596 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 655
G +R+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRK
Sbjct: 290 GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRK 349
Query: 656 IEIPLPNEQARLEILKIH 673
IE PLP+E+ + I IH
Sbjct: 350 IEFPLPDEKTKRRIFTIH 367
Score = 478 (173.3 bits), Expect = 1.4e-73, Sum P(2) = 1.4e-73
Identities = 90/200 (45%), Positives = 130/200 (65%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + T+ S ++ KY+G+ +L+RE+F A H P I+F+DEIDA+G +R
Sbjct: 234 LAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKR 293
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRKIE P
Sbjct: 294 YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFP 353
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LP+E+ + +IH + +++ ++ D +GAD++ +CTEAGL A+R R
Sbjct: 354 LPDEKTKRRI---FTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERR 410
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
VT EDF K+ V KK
Sbjct: 411 MKVTNEDFKKSKESVLYRKK 430
Score = 292 (107.8 bits), Expect = 1.4e-73, Sum P(2) = 1.4e-73
Identities = 61/132 (46%), Positives = 84/132 (63%)
Query: 108 IVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGD 167
IV + G + V +DK +L+ G V L+ ++ L + DP+V M E
Sbjct: 121 IVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQ 180
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
TY+ IGGL QI+E++E +ELPL +PE ++ +GI PPKG +LYGPPGTGKTLLA+AVA+
Sbjct: 181 ETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 240
Query: 228 QLDANFLKVVSS 239
Q A FL+VV S
Sbjct: 241 QTSATFLRVVGS 252
Score = 82 (33.9 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 22/72 (30%), Positives = 34/72 (47%)
Query: 424 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDF 483
T+ +F I + R + ++ + + D+ + TEAGL A+R R VT EDF
Sbjct: 359 TKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 418
Query: 484 MKAVRKVSDNKK 495
K+ V KK
Sbjct: 419 KKSKESVLYRKK 430
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 534 (193.0 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 102/170 (60%), Positives = 130/170 (76%)
Query: 499 KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 558
K + + +ELPL + EL++++GI PP+G L+YGPPG GKT+LA+AVA A+F++VV S
Sbjct: 169 KQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGS 228
Query: 559 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 618
V KY+GE R++R++F A+ + P IIF+DEIDAI +RF T ADRE+QR L+ELL
Sbjct: 229 EFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELL 288
Query: 619 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE-QARL 667
NQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE PLP+ Q RL
Sbjct: 289 NQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 338
Score = 456 (165.6 bits), Expect = 1.4e-73, Sum P(2) = 1.4e-73
Identities = 95/204 (46%), Positives = 123/204 (60%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + HH ++ S V KY+GE R++R++F A+ + P IIF+DEIDAI +R
Sbjct: 210 LAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR 269
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F T ADRE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE P
Sbjct: 270 FDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFP 329
Query: 376 LPNE-QARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE 434
LP+ Q RL S + ++D E V D +GAD+ +C EAG+ A+R
Sbjct: 330 LPDRRQKRLV----FSTITSKMNLSEDVDLEEFVARPDKISGADINAICQEAGMHAVREN 385
Query: 435 REYVTQEDFMKAVRKVSDNKKLDH 458
R V +DF K + + +H
Sbjct: 386 RYIVLAKDFEKGYKNNIKKDEQEH 409
Score = 316 (116.3 bits), Expect = 1.4e-73, Sum P(2) = 1.4e-73
Identities = 74/217 (34%), Positives = 125/217 (57%)
Query: 30 RLREMREQLKELTKQ--YDKSENDLKALQSVGQHDLLLHCVREQLKELTKQYDKSENDLK 87
+L++ L EL + Y + + K L+ + + ++++ + L K+Y ++ ++K
Sbjct: 19 KLKDAHSSLDELDMEDLYVRYKKLQKTLEFIEVQE---EYIKDEQRNLKKEYLHAQEEVK 75
Query: 88 ALQSVGQV--SLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTI 145
+QSV V +V + T IV +T G Y V +D+ LK VAL + +
Sbjct: 76 RIQSVPLVIGQFLEAVDQN-TGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNAL 134
Query: 146 MRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPP 205
+ LP E D + + ++ D++Y+ IGG+ Q +E+RE +ELPL + EL++++GI PP
Sbjct: 135 VDVLPPEADSSISMLQPDEKPDVSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPP 194
Query: 206 KGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
+G L+YGPPG GKT+LA+AVA A+F++VV S FV
Sbjct: 195 RGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFV 231
Score = 57 (25.1 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 15/54 (27%), Positives = 32/54 (59%)
Query: 6 VDEVRHKTLQDYRKKLTEHAE-VEGRLREMREQLKELTKQYDKSENDLKALQSV 58
+DE+ + L KKL + E +E + ++++ + L K+Y ++ ++K +QSV
Sbjct: 27 LDELDMEDLYVRYKKLQKTLEFIEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 80
Score = 57 (25.1 bits), Expect = 8.4e-31, Sum P(2) = 8.4e-31
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 495
E V E+F+ K+S D N+ EAG+ A+R R V +DF K + ++ KK
Sbjct: 351 EDVDLEEFVARPDKISG---AD-INAICQEAGMHAVRENRYIVLAKDFEKGYK--NNIKK 404
Query: 496 LESKLDY 502
E + ++
Sbjct: 405 DEQEHEF 411
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 109/198 (55%), Positives = 150/198 (75%)
Query: 478 VTQEDFMKAVRKV-SDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGT 535
VT KA ++ +D L++++ + K +ELPL +PE ++ +GI PPKG +LYGPPGT
Sbjct: 171 VTVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 536 GKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI 595
GKTLLA+AVA+Q A FL+VV S ++ KY+G+ +L+RE+F A H P I+F+DEIDAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAI 290
Query: 596 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 655
G +R+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRK
Sbjct: 291 GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRK 350
Query: 656 IEIPLPNEQARLEILKIH 673
IE PLP+E+ + I +IH
Sbjct: 351 IEFPLPDEKTKKRIFQIH 368
Score = 471 (170.9 bits), Expect = 1.6e-73, Sum P(2) = 1.6e-73
Identities = 88/191 (46%), Positives = 126/191 (65%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + T+ S ++ KY+G+ +L+RE+F A H P I+F+DEIDAIG +R
Sbjct: 235 LAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKR 294
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRKIE P
Sbjct: 295 YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFP 354
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LP+E+ + IH + ++ + ++ D +GAD++ +CTEAGL A+R R
Sbjct: 355 LPDEKTKKRI---FQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERR 411
Query: 436 EYVTQEDFMKA 446
VT EDF K+
Sbjct: 412 MKVTNEDFKKS 422
Score = 299 (110.3 bits), Expect = 1.6e-73, Sum P(2) = 1.6e-73
Identities = 69/173 (39%), Positives = 102/173 (58%)
Query: 69 REQLKELTKQYDKSENDLKALQSVGQVSLST--SVSKCWTVIVKATNGPRYVVGCRRQLD 126
+EQ+K L ++ ++ + + L+ +S+ T + IV + G + V +D
Sbjct: 82 QEQMKPLEEKQEEERSKVDDLRGT-PMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVD 140
Query: 127 KAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREV 186
K L+ G V L+ ++ L + DPLV M E TY+ IGGL QI+E++E
Sbjct: 141 KDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKLEKAPQETYADIGGLDNQIQEIKES 200
Query: 187 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 239
+ELPL +PE ++ +GI PPKG +LYGPPGTGKTLLA+AVA+Q A FL+VV S
Sbjct: 201 VELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGS 253
Score = 72 (30.4 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 424 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDF 483
T+ +F I + R + + + + D+ + TEAGL A+R R VT EDF
Sbjct: 360 TKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419
Query: 484 MKA 486
K+
Sbjct: 420 KKS 422
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 110/214 (51%), Positives = 153/214 (71%)
Query: 475 REYVTQEDFMKAVRKVSDNKK----LESKL-DYKPVIELPLLNPELFQRVGITPPKGCLL 529
+EY + M+ + K S++ L+ ++ D I LP+L+ E F+++GI PPKG L+
Sbjct: 166 QEYDNRVKAMEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLM 225
Query: 530 YGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFM 589
+GPPGTGKTLLARA ASQ +A FLK+ +V +IG+ A+++R+ FN A+ P IIF+
Sbjct: 226 HGPPGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFI 285
Query: 590 DEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRP 649
DE+DAIG +RF S DRE+QRT++ELLNQ+DGF + VK+I ATNRPDTLDPALLR
Sbjct: 286 DELDAIGTKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRS 345
Query: 650 GRLDRKIEIPLPNEQARLEILKIHAGPIAKHGEI 683
GRLDRKIE+P PNE++R IL+IH+ + H ++
Sbjct: 346 GRLDRKIELPHPNEESRARILQIHSRKMNVHKDV 379
Score = 472 (171.2 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
Identities = 92/200 (46%), Positives = 130/200 (65%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R T+ +V +IG+ A+++R+ FN A+ P IIF+DE+DAIG +R
Sbjct: 236 LARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKR 295
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F S DRE+QRT++ELLNQ+DGF + VK+I ATNRPDTLDPALLR GRLDRKIE+P
Sbjct: 296 FDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELP 355
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
PNE++R A + IH+ + H ++++E + + +D FNGA L+ VC EAG+ A+R
Sbjct: 356 HPNEESR-ARI--LQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGA 412
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
+ EDF++ + V KK
Sbjct: 413 TEIDHEDFVEGITSVLSKKK 432
Score = 297 (109.6 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
Identities = 79/222 (35%), Positives = 123/222 (55%)
Query: 23 EHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQLKELTKQYDKS 82
EHA ++ + ++E++K+ ++ ++ L L + L L E+ E+ +YD
Sbjct: 42 EHARLKNEYKNLQEKIKDNVEKIHLNKM-LPYLVANVVESLDLEDEEEE-NEIKDEYDLY 99
Query: 83 ENDLKALQSVGQVSLSTSV-SKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMT 141
+N+LK L G + KC +++K + + +D ++LK G V ++
Sbjct: 100 DNNLK-LSHEGFRDIDDEKRGKC--MVIKTSTRQTIFLPVPGLIDASELKPGDLVGVNKD 156
Query: 142 TLTIMRYLPREVDPLVYNMSH-EDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRV 200
+ I+ LP+E D V M E P + YS IGGL +QI +L E I LP+L+ E F+++
Sbjct: 157 SYLIIDKLPQEYDNRVKAMEVIEKPSE-DYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKI 215
Query: 201 GITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
GI PPKG L++GPPGTGKTLLARA ASQ +A FLK+ V
Sbjct: 216 GIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLV 257
Score = 64 (27.6 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 19/79 (24%), Positives = 37/79 (46%)
Query: 424 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDF 483
+ A + I S + V ++ + + + +D+ + EAG+ A+R + EDF
Sbjct: 361 SRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEIDHEDF 420
Query: 484 MKAVRKVSDNKKLESKLDY 502
++ + V KK S L+Y
Sbjct: 421 VEGITSVLSKKK--STLNY 437
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 110/214 (51%), Positives = 153/214 (71%)
Query: 475 REYVTQEDFMKAVRKVSDNKK----LESKL-DYKPVIELPLLNPELFQRVGITPPKGCLL 529
+EY + M+ + K S++ L+ ++ D I LP+L+ E F+++GI PPKG L+
Sbjct: 166 QEYDNRVKAMEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLM 225
Query: 530 YGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFM 589
+GPPGTGKTLLARA ASQ +A FLK+ +V +IG+ A+++R+ FN A+ P IIF+
Sbjct: 226 HGPPGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFI 285
Query: 590 DEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRP 649
DE+DAIG +RF S DRE+QRT++ELLNQ+DGF + VK+I ATNRPDTLDPALLR
Sbjct: 286 DELDAIGTKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRS 345
Query: 650 GRLDRKIEIPLPNEQARLEILKIHAGPIAKHGEI 683
GRLDRKIE+P PNE++R IL+IH+ + H ++
Sbjct: 346 GRLDRKIELPHPNEESRARILQIHSRKMNVHKDV 379
Score = 472 (171.2 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
Identities = 92/200 (46%), Positives = 130/200 (65%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R T+ +V +IG+ A+++R+ FN A+ P IIF+DE+DAIG +R
Sbjct: 236 LARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKR 295
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F S DRE+QRT++ELLNQ+DGF + VK+I ATNRPDTLDPALLR GRLDRKIE+P
Sbjct: 296 FDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELP 355
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
PNE++R A + IH+ + H ++++E + + +D FNGA L+ VC EAG+ A+R
Sbjct: 356 HPNEESR-ARI--LQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGA 412
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
+ EDF++ + V KK
Sbjct: 413 TEIDHEDFVEGITSVLSKKK 432
Score = 297 (109.6 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
Identities = 79/222 (35%), Positives = 123/222 (55%)
Query: 23 EHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQLKELTKQYDKS 82
EHA ++ + ++E++K+ ++ ++ L L + L L E+ E+ +YD
Sbjct: 42 EHARLKNEYKNLQEKIKDNVEKIHLNKM-LPYLVANVVESLDLEDEEEE-NEIKDEYDLY 99
Query: 83 ENDLKALQSVGQVSLSTSV-SKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMT 141
+N+LK L G + KC +++K + + +D ++LK G V ++
Sbjct: 100 DNNLK-LSHEGFRDIDDEKRGKC--MVIKTSTRQTIFLPVPGLIDASELKPGDLVGVNKD 156
Query: 142 TLTIMRYLPREVDPLVYNMSH-EDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRV 200
+ I+ LP+E D V M E P + YS IGGL +QI +L E I LP+L+ E F+++
Sbjct: 157 SYLIIDKLPQEYDNRVKAMEVIEKPSE-DYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKI 215
Query: 201 GITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
GI PPKG L++GPPGTGKTLLARA ASQ +A FLK+ V
Sbjct: 216 GIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLV 257
Score = 64 (27.6 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 19/79 (24%), Positives = 37/79 (46%)
Query: 424 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDF 483
+ A + I S + V ++ + + + +D+ + EAG+ A+R + EDF
Sbjct: 361 SRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEIDHEDF 420
Query: 484 MKAVRKVSDNKKLESKLDY 502
++ + V KK S L+Y
Sbjct: 421 VEGITSVLSKKK--STLNY 437
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 534 (193.0 bits), Expect = 7.8e-54, Sum P(2) = 7.8e-54
Identities = 100/170 (58%), Positives = 131/170 (77%)
Query: 499 KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 558
K + + +ELPL + +L++++GI PP+G LL+GPPG GKT+LA+AVA A+F++VV S
Sbjct: 161 KQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGS 220
Query: 559 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 618
V KY+GE R++R++F A+ + P IIF+DEIDAI +RF T ADRE+QR L+ELL
Sbjct: 221 EFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELL 280
Query: 619 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE-QARL 667
NQMDGFD +K+IMATNR DTLDPALLRPGRLDRKIE+PLP+ Q RL
Sbjct: 281 NQMDGFDETTNIKVIMATNRADTLDPALLRPGRLDRKIELPLPDRRQKRL 330
Score = 458 (166.3 bits), Expect = 2.9e-73, Sum P(2) = 2.9e-73
Identities = 93/195 (47%), Positives = 124/195 (63%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + HH ++ S V KY+GE R++R++F A+ + P IIF+DEIDAI +R
Sbjct: 202 LAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKR 261
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F T ADRE+QR L+ELLNQMDGFD +K+IMATNR DTLDPALLRPGRLDRKIE+P
Sbjct: 262 FDAQTGADREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRPGRLDRKIELP 321
Query: 376 LPNE-QARLAHTWPIS-IHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRS 433
LP+ Q RL T S ++ G ++D E ++ D + AD+ +C EAG+ A+R
Sbjct: 322 LPDRRQKRLVFTTITSKMNVGE-----DVDLEDIIARPDKISNADINAICQEAGMHAVRE 376
Query: 434 EREYVTQEDFMKAVR 448
R V +DF K +
Sbjct: 377 NRYVVNAKDFEKGYK 391
Score = 311 (114.5 bits), Expect = 2.9e-73, Sum P(2) = 2.9e-73
Identities = 79/224 (35%), Positives = 132/224 (58%)
Query: 31 LREMREQLKELTKQ----YDKSE-NDLKALQSVGQHDLLLHCVREQ-LKE----LTKQYD 80
+R ++E++ + +Q YD + +DL L Q +L L V+E +KE L K++
Sbjct: 1 MRLLKEEIAQFHEQSLEKYDGLDPHDLYVLYKKLQMELELIQVQEDYIKEEQRNLKKEFI 60
Query: 81 KSENDLKALQSVGQV--SLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVAL 138
++ ++K +++V V +V + IV +T G Y V +D+ +LK + V L
Sbjct: 61 HAQEEVKRIKAVPLVIGQFLEAVDEN-NGIVASTTGSNYYVRVLSTIDREQLKPSSSVGL 119
Query: 139 DMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQ 198
+ ++ +P E D + +S ++ DI+YS IGGL Q +E+RE +ELPL + +L++
Sbjct: 120 HKQSNCLVDLVPPEADSTISMLSPDEKPDISYSDIGGLDIQKQEIREAVELPLTHAQLYK 179
Query: 199 RVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
++GI PP+G LL+GPPG GKT+LA+AVA A+F++VV S FV
Sbjct: 180 QIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFV 223
Score = 57 (25.1 bits), Expect = 2.9e-30, Sum P(2) = 2.9e-30
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVR 488
E V ED + K+S N + N+ EAG+ A+R R V +DF K +
Sbjct: 343 EDVDLEDIIARPDKIS-NADI---NAICQEAGMHAVRENRYVVNAKDFEKGYK 391
Score = 40 (19.1 bits), Expect = 7.8e-54, Sum P(2) = 7.8e-54
Identities = 8/42 (19%), Positives = 25/42 (59%)
Query: 17 YRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSV 58
Y+K E ++ + ++E+ + L K++ ++ ++K +++V
Sbjct: 31 YKKLQMELELIQVQEDYIKEEQRNLKKEFIHAQEEVKRIKAV 72
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 109/198 (55%), Positives = 149/198 (75%)
Query: 478 VTQEDFMKAVRKV-SDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGT 535
VT KA ++ +D L+S++ + K +ELPL +PE ++ +GI PPKG +LYG PGT
Sbjct: 171 VTVMKVEKAPQETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGT 230
Query: 536 GKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI 595
GKTLLA+AVA+Q A FL+VV S ++ KY+G+ +L+RE+F A H P I+F+DEIDAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 596 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 655
G +R+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRK
Sbjct: 291 GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRK 350
Query: 656 IEIPLPNEQARLEILKIH 673
IE PLP+E+ + I +IH
Sbjct: 351 IEFPLPDEKTKRRIFQIH 368
Score = 473 (171.6 bits), Expect = 6.6e-73, Sum P(2) = 6.6e-73
Identities = 90/200 (45%), Positives = 129/200 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + T+ S ++ KY+G+ +L+RE+F A H P I+F+DEIDAIG +R
Sbjct: 235 LAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRKIE P
Sbjct: 295 YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFP 354
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LP+E+ + IH + ++ + ++ D +GAD++ +CTEAGL A+R R
Sbjct: 355 LPDEKTKRRI---FQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERR 411
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
VT EDF K+ V K+
Sbjct: 412 MKVTNEDFKKSKENVLYKKQ 431
Score = 291 (107.5 bits), Expect = 6.6e-73, Sum P(2) = 6.6e-73
Identities = 68/173 (39%), Positives = 101/173 (58%)
Query: 69 REQLKELTKQYDKSENDLKALQSVGQVSLST--SVSKCWTVIVKATNGPRYVVGCRRQLD 126
+EQ+K L ++ ++ + + L+ +S+ T + IV + G + V +D
Sbjct: 82 QEQMKPLEEKQEEERSKVDDLRGT-PMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVD 140
Query: 127 KAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREV 186
K L+ G V L+ ++ L + DPLV M E TY+ IGGL QI+E++E
Sbjct: 141 KDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDSQIQEIKES 200
Query: 187 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 239
+ELPL +PE ++ +GI PPKG +LYG PGTGKTLLA+AVA+Q A FL+VV S
Sbjct: 201 VELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGS 253
Score = 76 (31.8 bits), Expect = 8.1e-27, Sum P(2) = 8.1e-27
Identities = 22/72 (30%), Positives = 33/72 (45%)
Query: 424 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDF 483
T+ +F I + R V + + + D+ + TEAGL A+R R VT EDF
Sbjct: 360 TKRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419
Query: 484 MKAVRKVSDNKK 495
K+ V K+
Sbjct: 420 KKSKENVLYKKQ 431
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 108/198 (54%), Positives = 149/198 (75%)
Query: 478 VTQEDFMKAVRKV-SDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGT 535
VT KA ++ +D L++++ + K +ELPL +PE ++ +GI PPKG +LYG PGT
Sbjct: 171 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGT 230
Query: 536 GKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI 595
GKTLLA+AVA+Q A FL+VV S ++ KY+G+ +L+RE+F A H P I+F+DEIDAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 596 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 655
G +R+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRK
Sbjct: 291 GTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRK 350
Query: 656 IEIPLPNEQARLEILKIH 673
IE PLP+E+ + I +IH
Sbjct: 351 IEFPLPDEKTKRRIFQIH 368
Score = 473 (171.6 bits), Expect = 6.6e-73, Sum P(2) = 6.6e-73
Identities = 90/200 (45%), Positives = 129/200 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + T+ S ++ KY+G+ +L+RE+F A H P I+F+DEIDAIG +R
Sbjct: 235 LAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR +TLDPAL+RPGR+DRKIE P
Sbjct: 295 YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFP 354
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LP+E+ + IH + ++ + ++ D +GAD++ +CTEAGL A+R R
Sbjct: 355 LPDEKTKRRI---FQIHTSRMTVAEDVSLDDLILAKDDLSGADIKAICTEAGLMALRERR 411
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
VT EDF K+ V K+
Sbjct: 412 MKVTNEDFKKSKENVLYKKQ 431
Score = 291 (107.5 bits), Expect = 6.6e-73, Sum P(2) = 6.6e-73
Identities = 68/173 (39%), Positives = 101/173 (58%)
Query: 69 REQLKELTKQYDKSENDLKALQSVGQVSLST--SVSKCWTVIVKATNGPRYVVGCRRQLD 126
+EQ+K L ++ ++ + + L+ +S+ T + IV + G + V +D
Sbjct: 82 QEQMKPLEEKQEEERSKVDDLRGT-PMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVD 140
Query: 127 KAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREV 186
K L+ G V L+ ++ L + DPLV M E TY+ IGGL QI+E++E
Sbjct: 141 KDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKES 200
Query: 187 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 239
+ELPL +PE ++ +GI PPKG +LYG PGTGKTLLA+AVA+Q A FL+VV S
Sbjct: 201 VELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGS 253
Score = 78 (32.5 bits), Expect = 5.0e-27, Sum P(2) = 5.0e-27
Identities = 22/72 (30%), Positives = 34/72 (47%)
Query: 424 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDF 483
T+ +F I + R V ++ + + D+ + TEAGL A+R R VT EDF
Sbjct: 360 TKRRIFQIHTSRMTVAEDVSLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419
Query: 484 MKAVRKVSDNKK 495
K+ V K+
Sbjct: 420 KKSKENVLYKKQ 431
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 409 (149.0 bits), Expect = 9.1e-73, Sum P(3) = 9.1e-73
Identities = 82/185 (44%), Positives = 118/185 (63%)
Query: 499 KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 558
+++ + I P+ PEL+Q VGI+ P G LL+GPPG GKTLLA+AVA++ ANF+ +
Sbjct: 501 RVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGP 560
Query: 559 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 618
+++KY+GES R +R++F AR PC+IF DE+DA+ RR + A + TL L
Sbjct: 561 ELLNKYVGESERAVRQVFLRARASSPCVIFFDELDAMVPRRDDSLSEASSRVVNTL---L 617
Query: 619 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIA 678
++DG V +I ATNRPD +DPA+LRPGRLD+ + + LP+ R+EILK
Sbjct: 618 TELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTP 677
Query: 679 KHGEI 683
H E+
Sbjct: 678 LHEEV 682
Score = 354 (129.7 bits), Expect = 2.3e-28, Sum P(2) = 2.3e-28
Identities = 77/183 (42%), Positives = 122/183 (66%)
Query: 505 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKY 564
++ +P+ +PE++Q GI PP+G LL+GPPG GKT+LA A+A++L F+ + + +IV
Sbjct: 189 LVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGVPFISISAPSIVSGM 248
Query: 565 IGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM-ELLNQMD- 622
GES + +RE+F A++ PC++F+DEIDA+ +R SA RE++R ++ + L MD
Sbjct: 249 SGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKR----ESAQREMERRIVAQFLTCMDE 304
Query: 623 -GFDSL-GQ-VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAK 679
F+ G+ V +I ATNRPD+LD AL R GR DR+I + +P++ AR +IL+ A +
Sbjct: 305 LSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKILRTMAKGLKL 364
Query: 680 HGE 682
G+
Sbjct: 365 SGD 367
Score = 267 (99.0 bits), Expect = 6.2e-36, Sum P(2) = 6.2e-36
Identities = 59/158 (37%), Positives = 92/158 (58%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
+++KY+GES R +R++F AR PC+IF DE+DA+ RR + A + TL L
Sbjct: 562 LLNKYVGESERAVRQVFLRARASSPCVIFFDELDAMVPRRDDSLSEASSRVVNTL---LT 618
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
++DG V +I ATNRPD +DPA+LRPGRLD+ + + LP+ R+ ++ P
Sbjct: 619 ELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQT-P 677
Query: 396 IAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRS 433
+ + +D + +F+GADL + EA + A+RS
Sbjct: 678 LHEEVNLDVLGRDERCSNFSGADLAALVREAAVTALRS 715
Score = 239 (89.2 bits), Expect = 9.1e-73, Sum P(3) = 9.1e-73
Identities = 66/171 (38%), Positives = 101/171 (59%)
Query: 270 PFYS-SA--IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI 326
PF S SA IV GES + +RE+F A++ PC++F+DEIDA+ +R SA RE+
Sbjct: 235 PFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKR----ESAQREM 290
Query: 327 QRTLM-ELLNQMD--GFDSL-GQ-VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQA 381
+R ++ + L MD F+ G+ V +I ATNRPD+LD AL R GR DR+I + +P++ A
Sbjct: 291 ERRIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDA 350
Query: 382 RLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIR 432
R + A + G+ D+ + K + + GADL+ + AG+ AI+
Sbjct: 351 REKI---LRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIK 398
Score = 206 (77.6 bits), Expect = 9.1e-73, Sum P(3) = 9.1e-73
Identities = 38/83 (45%), Positives = 58/83 (69%)
Query: 161 SHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTL 220
+ E P DI+ S IGGL + I EL E++ +P+ +PE++Q GI PP+G LL+GPPG GKT+
Sbjct: 164 NREPPSDISLSDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTM 223
Query: 221 LARAVASQLDANFLKVVSSLFVT 243
LA A+A++L F+ + + V+
Sbjct: 224 LANALANELGVPFISISAPSIVS 246
Score = 182 (69.1 bits), Expect = 8.6e-67, Sum P(3) = 8.6e-67
Identities = 67/241 (27%), Positives = 118/241 (48%)
Query: 275 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 334
+IV GES + +RE+F A++ PC++F+DEIDA+ +R S +R I + +
Sbjct: 243 SIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKRESAQREMERRIVAQFLTCM 302
Query: 335 NQMDGFDSLGQ-VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQAR--LAHTWPISI 391
+++ + G+ V +I ATNRPD+LD AL R GR DR+I + +P++ AR + T +
Sbjct: 303 DELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKILRTMAKGL 362
Query: 392 H-AGP-----IAKH--GEI--DYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQE 441
+G +AK G + D +A+ + + N + + S+ + +
Sbjct: 363 KLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIKRIFNEISPLNKLDLNSDPRF-NEL 421
Query: 442 DFMKAVRKVSDNKKLDHCNSYRTEAG-----LFAIRSEREYVTQEDFMKAVRKVSDNKKL 496
D A+ +D+ LDH + + L E + +DF++A+ KV + K
Sbjct: 422 DSDMALDS-NDSLPLDHSSIIQRYLNAHPDPLSPEELEPLAICPQDFIEALAKVQPSSKR 480
Query: 497 E 497
E
Sbjct: 481 E 481
Score = 176 (67.0 bits), Expect = 8.7e-33, Sum P(2) = 8.7e-33
Identities = 38/73 (52%), Positives = 53/73 (72%)
Query: 165 PGDITYSAIGGLSEQIR-ELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLAR 223
PG ++++ IG L + IR EL+ I P+ PEL+Q VGI+ P G LL+GPPG GKTLLA+
Sbjct: 487 PG-VSWNNIGAL-KSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAK 544
Query: 224 AVASQLDANFLKV 236
AVA++ ANF+ +
Sbjct: 545 AVANESKANFISI 557
Score = 41 (19.5 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 21/101 (20%), Positives = 40/101 (39%)
Query: 404 YEAVVKLSDSFNGADLRN--VCTEAGLFAIRSEREY----VTQEDFMKAVRKVSDNKKLD 457
+E +V L D+ ++ V T + ++ ER+ + + K V KV D K +
Sbjct: 17 HERLVSLKDTIQQTEIEEWPVSTRRAIQFVQ-ERDMSLRRIKKPILEKVVEKVLDTLKAE 75
Query: 458 HCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLES 498
+ L + S+ E + + M+ NK + S
Sbjct: 76 VEEKLASSQDLVLVDSDMEEQSDSNLMEVKDTNVINKSITS 116
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 103/184 (55%), Positives = 142/184 (77%)
Query: 491 SDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 549
SD LE+++ + K IELPL +PEL++ +GI PPKG +LYG PGTGKTLLA+AVA+Q
Sbjct: 184 SDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTS 243
Query: 550 ANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADRE 609
A FL+VV S ++ KY+G+ +L+RE+F A P I+F+DEIDA+G +R+ + +RE
Sbjct: 244 ATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRYDSQSGGERE 303
Query: 610 IQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEI 669
IQRT++ELLNQ+DGFD+ VK+IMATNR +TLDPAL+RPGR+DRKIE PLP+ + + +I
Sbjct: 304 IQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDIKTKRKI 363
Query: 670 LKIH 673
+IH
Sbjct: 364 FEIH 367
Score = 440 (159.9 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 86/195 (44%), Positives = 124/195 (63%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + T+ S ++ KY+G+ +L+RE+F A P I+F+DEIDA+G +R
Sbjct: 234 LAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKR 293
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
+ + +REIQRT++ELLNQ+DGFD+ VK+IMATNR +TLDPAL+RPGR+DRKIE P
Sbjct: 294 YDSQSGGEREIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFP 353
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LP+ + + IH + +++ E V D +GAD++ +CTE+GL A+R R
Sbjct: 354 LPDIKTKRKI---FEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALRERR 410
Query: 436 EYVTQEDFMKAVRKV 450
VT DF KA KV
Sbjct: 411 MRVTHTDFKKAKEKV 425
Score = 325 (119.5 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 67/132 (50%), Positives = 90/132 (68%)
Query: 108 IVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGD 167
IV +T GP + V +DK+KL G V L+ TL+++ + EVDP+V M E
Sbjct: 121 IVSSTVGPEHYVRIMSFVDKSKLYLGATVLLNNKTLSVVGVIDGEVDPMVNVMKVEKAPT 180
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+YS IGGL Q++E++E IELPL +PEL++ +GI PPKG +LYG PGTGKTLLA+AVA+
Sbjct: 181 ESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVAN 240
Query: 228 QLDANFLKVVSS 239
Q A FL+VV S
Sbjct: 241 QTSATFLRVVGS 252
Score = 72 (30.4 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 20/72 (27%), Positives = 36/72 (50%)
Query: 419 LRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYV 478
L ++ T+ +F I + + ++++ ++ D+ + TE+GL A+R R V
Sbjct: 354 LPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALRERRMRV 413
Query: 479 TQEDFMKAVRKV 490
T DF KA KV
Sbjct: 414 THTDFKKAKEKV 425
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 413 (150.4 bits), Expect = 1.2e-72, Sum P(3) = 1.2e-72
Identities = 81/173 (46%), Positives = 117/173 (67%)
Query: 499 KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 558
+L+ I P+ PEL+++VGI+ P G LL+GPPG GKTLLA+AVA++ ANF+ +
Sbjct: 542 RLELNMAIVQPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIKGP 601
Query: 559 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 618
+++KY+GES R IR++F AR PC+IF DE+DA+ RR TS R + LL
Sbjct: 602 ELLNKYVGESERSIRQVFTRARASVPCVIFFDELDALVPRR---DTSLSESSSRVVNTLL 658
Query: 619 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
++DG + + +I ATNRPD +DPA+LRPGRLD+ + I LPN + +L+I+K
Sbjct: 659 TELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIK 711
Score = 368 (134.6 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 85/198 (42%), Positives = 125/198 (63%)
Query: 505 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKY 564
+I LP+L+PE+F G+ PP+G LL+GPPG GKT +A A+A +L F+ + + ++V
Sbjct: 220 LIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANALAGELQVPFISISAPSVVSGM 279
Query: 565 IGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM-ELLNQMDG 623
GES + IR++F+ AR+ PC++F DEIDAI +R +G A RE++R ++ +LL MD
Sbjct: 280 SGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKR--DG-GAQREMERRIVAQLLTSMDE 336
Query: 624 FD---SLGQ-VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAK 679
+ G+ V +I ATNRPD+LD AL R GR DR+I + +PNE +RL ILK + +
Sbjct: 337 LTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPNEVSRLHILKKMSDNLKI 396
Query: 680 HGEIGDAATKWVLPFTAG 697
G I A + P G
Sbjct: 397 DGAIDFAKLAKLTPGFVG 414
Score = 319 (117.4 bits), Expect = 5.7e-39, Sum P(2) = 5.7e-39
Identities = 79/230 (34%), Positives = 129/230 (56%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
+++KY+GES R IR++F AR PC+IF DE+DA+ RR TS R + LL
Sbjct: 603 LLNKYVGESERSIRQVFTRARASVPCVIFFDELDALVPRR---DTSLSESSSRVVNTLLT 659
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPIS-IHAG 394
++DG + + +I ATNRPD +DPA+LRPGRLD+ + I LPN + +L ++ H
Sbjct: 660 ELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKSHGT 719
Query: 395 PIAKHGEIDYEAVVKLS--DSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSD 452
P++ ++D+E +++ ++F+GADL + E+ + A++ R++ E+ ++ V D
Sbjct: 720 PLSS--DVDFEEIIRNEKCNNFSGADLAALVRESSVLALK--RKFFQSEE----IQSVLD 771
Query: 453 NKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDY 502
N LD E + E VT DF A+RK+ + + +L Y
Sbjct: 772 ND-LDK----EFEDLSVGVSGEEIIVTMSDFRSALRKIKPSVSDKDRLKY 816
Score = 263 (97.6 bits), Expect = 1.2e-72, Sum P(3) = 1.2e-72
Identities = 79/198 (39%), Positives = 114/198 (57%)
Query: 270 PFYS-SA--IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI 326
PF S SA +V GES + IR++F+ AR+ PC++F DEIDAI +R +G A RE+
Sbjct: 266 PFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKR--DG-GAQREM 322
Query: 327 QRTLM-ELLNQMDGFD---SLGQ-VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQA 381
+R ++ +LL MD + G+ V +I ATNRPD+LD AL R GR DR+I + +PNE +
Sbjct: 323 ERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPNEVS 382
Query: 382 RLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI-RSEREYVTQ 440
RL H + + + G ID+ + KL+ F GADL+ + T AG AI R + Y
Sbjct: 383 RL-HI--LKKMSDNLKIDGAIDFAKLAKLTPGFVGADLKALVTAAGTCAIKRIFQTYANI 439
Query: 441 EDF-MKAVRKVSDNKKLD 457
+ A DN ++D
Sbjct: 440 KSTPTTATDSSEDNMEID 457
Score = 181 (68.8 bits), Expect = 5.7e-39, Sum P(2) = 5.7e-39
Identities = 40/106 (37%), Positives = 62/106 (58%)
Query: 132 SGTRVAL-DMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELP 190
SG +++L + ++ LP + P D+T++ +G L EL I P
Sbjct: 494 SGEQLSLLSIKYEDFLKALPT-IQPTAKREGFATVPDVTWANVGALQRVRLELNMAIVQP 552
Query: 191 LLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
+ PEL+++VGI+ P G LL+GPPG GKTLLA+AVA++ ANF+ +
Sbjct: 553 IKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISI 598
Score = 179 (68.1 bits), Expect = 1.2e-72, Sum P(3) = 1.2e-72
Identities = 30/72 (41%), Positives = 50/72 (69%)
Query: 165 PGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARA 224
P + + ++GG+ + + +L E+I LP+L+PE+F G+ PP+G LL+GPPG GKT +A A
Sbjct: 199 PPNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANA 258
Query: 225 VASQLDANFLKV 236
+A +L F+ +
Sbjct: 259 LAGELQVPFISI 270
Score = 45 (20.9 bits), Expect = 8.0e-50, Sum P(3) = 8.0e-50
Identities = 7/22 (31%), Positives = 16/22 (72%)
Query: 487 VRKVSDNKKLESKLDYKPVIEL 508
++K+SDN K++ +D+ + +L
Sbjct: 387 LKKMSDNLKIDGAIDFAKLAKL 408
Score = 39 (18.8 bits), Expect = 6.5e-32, Sum P(3) = 6.5e-32
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 478 VTQEDFMKAVRKVSDNKKLESKLDYKPVIELPLLNPELFQRV 519
+ EDF+KA+ + K E + V ++ N QRV
Sbjct: 503 IKYEDFLKALPTIQPTAKREG---FATVPDVTWANVGALQRV 541
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 97/183 (53%), Positives = 139/183 (75%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ K +ELPL +PE ++ +GI PPKG +LYG PGTGKTLLA+AVA+Q A FL++V S +
Sbjct: 199 EIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSEL 258
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
+ KY+G+ +++RE+F A + P I+F+DEIDA+G +R+ + +REIQRT++ELLNQ
Sbjct: 259 IQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQ 318
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKH 680
+DGFDS G VK++MATNR ++LDPAL+RPGR+DRKIE PLP+E+ + I +IH +
Sbjct: 319 LDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLG 378
Query: 681 GEI 683
E+
Sbjct: 379 KEV 381
Score = 468 (169.8 bits), Expect = 8.6e-72, Sum P(2) = 8.6e-72
Identities = 88/200 (44%), Positives = 129/200 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + T+ S ++ KY+G+ +++RE+F A + P I+F+DEIDA+G +R
Sbjct: 238 LAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKR 297
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
+ + +REIQRT++ELLNQ+DGFDS G VK++MATNR ++LDPAL+RPGR+DRKIE P
Sbjct: 298 YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFP 357
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LP+E+ + IH + E++ E + D +GAD++ +CTEAGL A+R R
Sbjct: 358 LPDEKTKRRI---FQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERR 414
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
VT EDF K+ V KK
Sbjct: 415 MRVTMEDFQKSKENVLYRKK 434
Score = 286 (105.7 bits), Expect = 8.6e-72, Sum P(2) = 8.6e-72
Identities = 58/132 (43%), Positives = 83/132 (62%)
Query: 108 IVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGD 167
IV G + V +DK +L+ G V L+ ++ L + DP+V M E
Sbjct: 125 IVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQ 184
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
TY+ +GGL +QI+E++E +ELPL +PE ++ +GI PPKG +LYG PGTGKTLLA+AVA+
Sbjct: 185 ETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVAN 244
Query: 228 QLDANFLKVVSS 239
Q A FL++V S
Sbjct: 245 QTSATFLRIVGS 256
Score = 81 (33.6 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 27/76 (35%), Positives = 37/76 (48%)
Query: 424 TEAGLFAIRSER----EYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVT 479
T+ +F I + R + V E+F+ A ++S C TEAGL A+R R VT
Sbjct: 363 TKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMC----TEAGLLALRERRMRVT 418
Query: 480 QEDFMKAVRKVSDNKK 495
EDF K+ V KK
Sbjct: 419 MEDFQKSKENVLYRKK 434
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 98/184 (53%), Positives = 140/184 (76%)
Query: 496 LESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 554
LES++ + + +ELPLL+PEL++ +GI PPKG +LYG PGTGKTLLA+AVA+Q A FL+
Sbjct: 209 LESQIQEVRESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLR 268
Query: 555 VVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 614
+V S ++ KY+G+ RL+R++F A H P I+F+DEIDAIG +R+ + +REIQRT+
Sbjct: 269 IVGSELIQKYLGDGPRLVRQIFQVAAEHAPSIVFIDEIDAIGTKRYDSTSGGEREIQRTM 328
Query: 615 MELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+ELLNQ+DGFD G VK+IMATN+ +TLDPAL+RPGR+DRKI P++ + +I +H
Sbjct: 329 LELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDQNTKKKIFTLHT 388
Query: 675 GPIA 678
++
Sbjct: 389 SKMS 392
Score = 438 (159.2 bits), Expect = 2.1e-71, Sum P(2) = 2.1e-71
Identities = 82/200 (41%), Positives = 125/200 (62%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + T+ S ++ KY+G+ RL+R++F A H P I+F+DEIDAIG +R
Sbjct: 254 LAKAVANQTSATFLRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSIVFIDEIDAIGTKR 313
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
+ + +REIQRT++ELLNQ+DGFD G VK+IMATN+ +TLDPAL+RPGR+DRKI
Sbjct: 314 YDSTSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFE 373
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
P++ + ++H ++ ++D + + D +GAD+R +CTEAGL A+R R
Sbjct: 374 NPDQNTKKKI---FTLHTSKMSLGDDVDLDEFINQKDDLSGADIRAICTEAGLMALRERR 430
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
V +DF A ++ K+
Sbjct: 431 MRVQMDDFRAARERIMKTKQ 450
Score = 315 (115.9 bits), Expect = 2.1e-71, Sum P(2) = 2.1e-71
Identities = 64/132 (48%), Positives = 87/132 (65%)
Query: 108 IVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGD 167
IV + GP Y V +DK L+ G + L T++++ L E DPLV M +
Sbjct: 141 IVSSATGPEYYVSIMSFVDKDLLEPGASILLHHKTVSVVGVLTEESDPLVSVMKLDKAPT 200
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+Y+ IGGL QI+E+RE +ELPLL+PEL++ +GI PPKG +LYG PGTGKTLLA+AVA+
Sbjct: 201 ESYADIGGLESQIQEVRESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 260
Query: 228 QLDANFLKVVSS 239
Q A FL++V S
Sbjct: 261 QTSATFLRIVGS 272
Score = 62 (26.9 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 18/73 (24%), Positives = 34/73 (46%)
Query: 424 TEAGLFAIRSEREYVTQE-DFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQED 482
T+ +F + + + + + D + + + D D + TEAGL A+R R V +D
Sbjct: 379 TKKKIFTLHTSKMSLGDDVDLDEFINQKDDLSGAD-IRAICTEAGLMALRERRMRVQMDD 437
Query: 483 FMKAVRKVSDNKK 495
F A ++ K+
Sbjct: 438 FRAARERIMKTKQ 450
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 104/174 (59%), Positives = 131/174 (75%)
Query: 499 KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 558
K + + +ELPL + L++++GI PP+G LLYGPPGTGKT+LA+AVA A F++VV S
Sbjct: 159 KQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGS 218
Query: 559 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 618
V KY+GE RL+R++F AR + P IIF+DEIDAI +RF T ADRE+QR LMELL
Sbjct: 219 EFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILMELL 278
Query: 619 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKI 672
NQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE PLP+ + + I ++
Sbjct: 279 NQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQV 332
Score = 469 (170.2 bits), Expect = 2.8e-71, Sum P(2) = 2.8e-71
Identities = 101/208 (48%), Positives = 125/208 (60%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + HH + S V KY+GE RL+R++F AR + P IIF+DEIDAI +R
Sbjct: 200 LAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKR 259
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F T ADRE+QR LMELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE P
Sbjct: 260 FDAQTGADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFP 319
Query: 376 LPNE-QARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE 434
LP+ Q RL + + E+D E V D +GA+++++C EAG+ AIR
Sbjct: 320 LPDRRQKRLI----FQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAIRKN 375
Query: 435 REYVTQEDFMKAVRKVSDNKKLDHCNSY 462
R + +DF K K S K N Y
Sbjct: 376 RYVILPKDFEKGY-KASIKKNTHEFNFY 402
Score = 280 (103.6 bits), Expect = 2.8e-71, Sum P(2) = 2.8e-71
Identities = 70/196 (35%), Positives = 115/196 (58%)
Query: 52 LKALQS-VGQHDLLLHCVREQLKELTKQYDKSENDLKALQSV----GQVSLSTSVSKCWT 106
+K+L+S + ++ ++ + K L ++ ++ ++K ++SV GQ+ L S T
Sbjct: 29 MKSLESKLDFFNIQEEYIKYEYKNLKRELLHAQEEVKRIRSVPLLIGQL-LEMVDSN--T 85
Query: 107 VIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG 166
IV++T+G V +D+ LK VAL + ++ LP E D ++ + ++
Sbjct: 86 GIVQSTSGSTLCVRILSTIDRELLKPSASVALQRHSNALVDTLPPESDSSIHLLGADEKP 145
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
+YS IGG Q +E+RE +ELPL + L++++GI PP+G LLYGPPGTGKT+LA+AVA
Sbjct: 146 SESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVA 205
Query: 227 SQLDANFLKVVSSLFV 242
A F++VV S FV
Sbjct: 206 HHTSAAFIRVVGSEFV 221
Score = 54 (24.1 bits), Expect = 6.6e-24, Sum P(2) = 6.6e-24
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 438 VTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVR 488
V ED++ K+S + C EAG+ AIR R + +DF K +
Sbjct: 343 VDLEDYVSRPDKLSGAEIQSICQ----EAGMHAIRKNRYVILPKDFEKGYK 389
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 103/170 (60%), Positives = 131/170 (77%)
Query: 499 KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 558
K + + +ELPL + EL+Q++GI PP+G L+YGPPG GKT+LA+AVA+ A+F++VV S
Sbjct: 170 KQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGS 229
Query: 559 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 618
V KY+GE R++R++F A+ + P IIF+DEIDAI +RF T ADRE+QR L+ELL
Sbjct: 230 EFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELL 289
Query: 619 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE-QARL 667
NQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE PLP+ Q RL
Sbjct: 290 NQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRL 339
Score = 438 (159.2 bits), Expect = 7.0e-71, Sum P(2) = 7.0e-71
Identities = 92/178 (51%), Positives = 116/178 (65%)
Query: 274 SAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMEL 333
S V KY+GE R++R++F A+ + P IIF+DEIDAI +RF T ADRE+QR L+EL
Sbjct: 229 SEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLEL 288
Query: 334 LNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE-QARLAHTWPISIH 392
LNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE PLP+ Q RL S
Sbjct: 289 LNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLV----FSTV 344
Query: 393 AGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKV 450
+ ++D E V D +GAD+ ++C EAG+ A+R R V +D KA + V
Sbjct: 345 CSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYKNV 402
Score = 310 (114.2 bits), Expect = 7.0e-71, Sum P(2) = 7.0e-71
Identities = 76/203 (37%), Positives = 117/203 (57%)
Query: 46 DKSENDLKALQSVGQHDLLLHCVREQLKELTKQYDK----SENDLKALQSVGQV--SLST 99
D S +D L ++ + L + + +K T+ +K ++ ++K +QSV V
Sbjct: 31 DVSSDDYIKLTTLERQLAHLQVMEDYIKLETRNLEKELLHAQEEVKRIQSVPLVIGQFLE 90
Query: 100 SVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYN 159
+V + IV +T G Y V LD+ LK G VAL + ++ LP E D +
Sbjct: 91 AVDQNHA-IVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQM 149
Query: 160 MSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKT 219
+ ++ DI+Y IGGL Q +E+RE +ELPL + EL+Q++GI PP+G L+YGPPG GKT
Sbjct: 150 LRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKT 209
Query: 220 LLARAVASQLDANFLKVVSSLFV 242
+LA+AVA+ A+F++VV S FV
Sbjct: 210 MLAKAVAANTAASFIRVVGSEFV 232
Score = 55 (24.4 bits), Expect = 6.1e-30, Sum P(2) = 6.1e-30
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 438 VTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKV 490
V ED++ K+S D NS EAG+ A+R R V +D KA + V
Sbjct: 354 VDLEDWVARPDKISG---AD-INSICQEAGMQAVRENRYVVLTKDLEKAYKNV 402
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 541 (195.5 bits), Expect = 6.9e-55, Sum P(2) = 6.9e-55
Identities = 104/170 (61%), Positives = 130/170 (76%)
Query: 499 KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 558
K + + +ELPL + EL++++GI PP+G LLYGPPGTGKT+LA+AVA+ A F++VV S
Sbjct: 164 KQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGS 223
Query: 559 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 618
V KY+GE R++R++F A+ + P IIF+DE+DAI RF T ADRE+QR LMELL
Sbjct: 224 EFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELL 283
Query: 619 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE-QARL 667
NQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE PLP+ Q RL
Sbjct: 284 NQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 333
Score = 440 (159.9 bits), Expect = 8.6e-71, Sum P(2) = 8.6e-71
Identities = 94/203 (46%), Positives = 122/203 (60%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + +H + S V KY+GE R++R++F A+ + P IIF+DE+DAI R
Sbjct: 205 LAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATAR 264
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F T ADRE+QR LMELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE P
Sbjct: 265 FDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFP 324
Query: 376 LPNE-QARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE 434
LP+ Q RL + + E+D E V D + A++ +C EAG+ A+R
Sbjct: 325 LPDRRQKRLV----FQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKN 380
Query: 435 REYVTQEDFMKAVRKVSDNKKLD 457
R + +DF K R ++ KK D
Sbjct: 381 RYVILPKDFEKGYR--ANVKKPD 401
Score = 307 (113.1 bits), Expect = 8.6e-71, Sum P(2) = 8.6e-71
Identities = 72/194 (37%), Positives = 115/194 (59%)
Query: 52 LKALQSVGQH-DLLLHCVREQLKELTKQYDKSENDLKALQSVGQV--SLSTSVSKCWTVI 108
LK+L+ + D+ V+++ K L ++ +++ ++K +QSV V V + I
Sbjct: 34 LKSLERQLEFTDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQN-NGI 92
Query: 109 VKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDI 168
V +T G Y V +++ LK VAL + ++ LP E D + +S + D+
Sbjct: 93 VGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDV 152
Query: 169 TYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQ 228
+Y+ IGG Q +E+RE +ELPL + EL++++GI PP+G LLYGPPGTGKT+LA+AVA+
Sbjct: 153 SYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANH 212
Query: 229 LDANFLKVVSSLFV 242
A F++VV S FV
Sbjct: 213 TTAAFIRVVGSEFV 226
Score = 60 (26.2 bits), Expect = 3.8e-30, Sum P(2) = 3.8e-30
Identities = 26/107 (24%), Positives = 46/107 (42%)
Query: 396 IAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 455
+ + G +D + L D + VCT + E V ED++ K+S +
Sbjct: 311 LLRPGRLDRKIEFPLPDRRQKRLVFQVCTSK--MNLSDE---VDLEDYVSRPDKISAAEI 365
Query: 456 LDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDY 502
C EAG+ A+R R + +DF K R ++ KK ++ ++
Sbjct: 366 AAICQ----EAGMHAVRKNRYVILPKDFEKGYR--ANVKKPDTDFEF 406
Score = 43 (20.2 bits), Expect = 6.9e-55, Sum P(2) = 6.9e-55
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 5 VVDEVRHKTLQDYRKKLTEHAEVEGRLREMREQLK--ELTKQYDKSEN-DLK 53
V+D L D + ++ GRL+ + QL+ ++ ++Y K E +LK
Sbjct: 10 VLDPKASPALMDL--STADEEDLYGRLKSLERQLEFTDIQEEYVKDEQKNLK 59
Score = 39 (18.8 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 6/25 (24%), Positives = 18/25 (72%)
Query: 34 MREQLKELTKQYDKSENDLKALQSV 58
++++ K L ++ +++ ++K +QSV
Sbjct: 51 VKDEQKNLKRELLRAQEEVKRIQSV 75
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 101/184 (54%), Positives = 138/184 (75%)
Query: 491 SDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 549
SD LES++ + K +ELPL +PEL++ +GI PPKG +LYG PGTGKTLLA+AVA+Q
Sbjct: 182 SDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTS 241
Query: 550 ANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADRE 609
A FL++V S ++ KY+G+ RL R++F A + P I+F+DEIDAIG +R+ + +RE
Sbjct: 242 ATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGGERE 301
Query: 610 IQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEI 669
IQRT++ELLNQ+DGFD G VK+IMATN+ +TLDPAL+RPGR+DRKI P+ + +I
Sbjct: 302 IQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKI 361
Query: 670 LKIH 673
L IH
Sbjct: 362 LGIH 365
Score = 437 (158.9 bits), Expect = 9.1e-71, Sum P(2) = 9.1e-71
Identities = 86/199 (43%), Positives = 125/199 (62%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + T+ S ++ KY+G+ RL R++F A + P I+F+DEIDAIG +R
Sbjct: 232 LAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKR 291
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
+ + +REIQRT++ELLNQ+DGFD G VK+IMATN+ +TLDPAL+RPGR+DRKI
Sbjct: 292 YDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFE 351
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
P+ + + IH + +++ E +V D +GAD++ +CTEAGL A+R R
Sbjct: 352 NPDLSTKKKI---LGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERR 408
Query: 436 EYVTQEDFMKAVRKVSDNK 454
VT EDF +A +V NK
Sbjct: 409 MQVTAEDFKQAKERVMKNK 427
Score = 310 (114.2 bits), Expect = 9.1e-71, Sum P(2) = 9.1e-71
Identities = 79/208 (37%), Positives = 116/208 (55%)
Query: 39 KELTKQYDKSENDLKAL--QSVGQHDLLLHCVREQLKELTKQYDKS-ENDLKALQSV--G 93
++L Y + LK L + + H LLL E+ K ++K E + K L+ +
Sbjct: 44 EKLPNIYPSTRCKLKLLRMERIKDH-LLLEEEFVSNSEILKPFEKKQEEEKKQLEEIRGN 102
Query: 94 QVSLST--SVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPR 151
+S+ T + IV + P Y V +DK L+ G V L T++I+ L
Sbjct: 103 PLSIGTLEEIIDDDHAIVTSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQD 162
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
+ DP+V M + +YS IGGL QI+E++E +ELPL +PEL++ +GI PPKG +LY
Sbjct: 163 DADPMVSVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILY 222
Query: 212 GPPGTGKTLLARAVASQLDANFLKVVSS 239
G PGTGKTLLA+AVA+Q A FL++V S
Sbjct: 223 GAPGTGKTLLAKAVANQTSATFLRIVGS 250
Score = 85 (35.0 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 421 NVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQ 480
++ T+ + I + + ++++ ++ + D+ + TEAGL A+R R VT
Sbjct: 354 DLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTA 413
Query: 481 EDFMKAVRKVSDNKKLESKLD 501
EDF +A +V NK +E L+
Sbjct: 414 EDFKQAKERVMKNK-VEENLE 433
>UNIPROTKB|H0YJS8 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR003959 Pfam:PF00004
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:AL133453 HGNC:HGNC:9553 Ensembl:ENST00000555339 Uniprot:H0YJS8
Length = 195
Score = 637 (229.3 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
Identities = 124/135 (91%), Positives = 128/135 (94%)
Query: 108 IVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGD 167
IVKATNGPRYVVGCRRQLDK+KLK GTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG+
Sbjct: 31 IVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGN 90
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
++YS IGGLSEQIRELREVIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLLARAVAS
Sbjct: 91 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 150
Query: 228 QLDANFLKVVSSLFV 242
QLD NFLKVVSS V
Sbjct: 151 QLDCNFLKVVSSSIV 165
Score = 427 (155.4 bits), Expect = 8.5e-47, Sum P(2) = 8.5e-47
Identities = 82/91 (90%), Positives = 86/91 (94%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ + VIELPL NPELFQRVGI PPKGCLLYGPPGTGKTLLARAVASQLD NFLKVVSS+I
Sbjct: 105 ELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSI 164
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDE 591
VDKYIGESARLIREMFNYAR+HQPCIIFMDE
Sbjct: 165 VDKYIGESARLIREMFNYARDHQPCIIFMDE 195
Score = 181 (68.8 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 36/52 (69%), Positives = 40/52 (76%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDE 307
L R L+ + SS+IVDKYIGESARLIREMFNYAR+HQPCIIFMDE
Sbjct: 144 LARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDE 195
Score = 93 (37.8 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
Identities = 17/24 (70%), Positives = 20/24 (83%)
Query: 10 RHKTLQDYRKKLTEHAEVEGRLRE 33
R K LQDYRKKL EH E++GRL+E
Sbjct: 6 RDKALQDYRKKLLEHKEIDGRLKE 29
>TAIR|locus:2084163 [details] [associations]
symbol:CDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0030422 "production of siRNA involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC009325 GO:GO:0009524
EMBL:AY136443 EMBL:BT002135 IPI:IPI00547846 RefSeq:NP_186810.2
UniGene:At.27731 UniGene:At.63552 ProteinModelPortal:Q9SS94
SMR:Q9SS94 IntAct:Q9SS94 PaxDb:Q9SS94 PRIDE:Q9SS94
EnsemblPlants:AT3G01610.1 GeneID:821105 KEGG:ath:AT3G01610
GeneFarm:1903 TAIR:At3g01610 InParanoid:Q9SS94 KO:K14571
OMA:REGFTTI PhylomeDB:Q9SS94 ProtClustDB:CLSN2720022
Genevestigator:Q9SS94 GermOnline:AT3G01610 Uniprot:Q9SS94
Length = 820
Score = 565 (203.9 bits), Expect = 7.6e-70, Sum P(2) = 7.6e-70
Identities = 166/482 (34%), Positives = 246/482 (51%)
Query: 270 PFYS-SA--IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI 326
PFY SA ++ G S IRE+F+ A P I+F+DEIDAIG +R E + E
Sbjct: 294 PFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKR--ENQQREME- 350
Query: 327 QRTLMELLNQMDG----------FDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPL 376
+R + +LL MDG S G V +I ATNRPD LDPAL R GR + +I +
Sbjct: 351 KRIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTA 410
Query: 377 PNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI----- 431
P+E AR A +S+ A + G D + + +L+ F GADL +V AG AI
Sbjct: 411 PDEDAR-AEI--LSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIKRILD 467
Query: 432 -RSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVR-K 489
R + ED +R ++L+ ++ A+ + +T+E F K
Sbjct: 468 SRKSEQSGDGEDDKSWLRMPWPEEELEKLFVKMSDFEE-AVNLVQASLTREGFSIVPDVK 526
Query: 490 VSDNKKLES-KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL 548
D L+ +L + I P+ P++++ G+ G LLYGPPG GKTL+A+A A++
Sbjct: 527 WDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEA 586
Query: 549 DANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADR 608
ANF+ + + +++KY+GES IR +F AR PC+IF DE+DA+ R EG
Sbjct: 587 GANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGKEGAWV-- 644
Query: 609 EIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLE 668
++R L + L ++DG + V +I ATNRPD +DPA LRPGR + +PLPN R
Sbjct: 645 -VERLLNQFLVELDGGERRN-VYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERAS 702
Query: 669 ILKIHAG--PIAKHGEIGDAATKWVLPFTAGGFIYI---ATVSVIPELLEDT-SPKQTVK 722
ILK A PI ++ A F+ ++ AT + E++ + S + V
Sbjct: 703 ILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEEMIGSSESSEDDVT 762
Query: 723 EI 724
+I
Sbjct: 763 DI 764
Score = 354 (129.7 bits), Expect = 6.0e-29, P = 6.0e-29
Identities = 88/241 (36%), Positives = 129/241 (53%)
Query: 494 KKLESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFL 553
KK+ +L+ + P+LNPE F+++G+ PP G L +GPPG GKT LA A+A++ F
Sbjct: 239 KKILDELEMN--VLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEAGVPFY 296
Query: 554 KVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRT 613
K+ ++ ++ G S IRE+F+ A P I+F+DEIDAIG +R E + E +R
Sbjct: 297 KISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKR--ENQQREME-KRI 353
Query: 614 LMELLNQMDG----------FDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE 663
+ +LL MDG S G V +I ATNRPD LDPAL R GR + +I + P+E
Sbjct: 354 VTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDE 413
Query: 664 QARLEILKIHAGPIAKHGEIGDAATKWVLPFTAGGFI----YIATVSVIPELLEDTSPKQ 719
AR EIL + A + G + P G + Y+A I +L+ +Q
Sbjct: 414 DARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIKRILDSRKSEQ 473
Query: 720 T 720
+
Sbjct: 474 S 474
Score = 165 (63.1 bits), Expect = 7.6e-70, Sum P(2) = 7.6e-70
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 169 TYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQ 228
T+ GG+ + + EL + P+LNPE F+++G+ PP G L +GPPG GKT LA A+A++
Sbjct: 231 TFKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANE 290
Query: 229 LDANFLKV 236
F K+
Sbjct: 291 AGVPFYKI 298
Score = 145 (56.1 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 26/70 (37%), Positives = 42/70 (60%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
D+ + +GGL + I P+ P++++ G+ G LLYGPPG GKTL+A+A A
Sbjct: 524 DVKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAA 583
Query: 227 SQLDANFLKV 236
++ ANF+ +
Sbjct: 584 NEAGANFMHI 593
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 511 (184.9 bits), Expect = 1.1e-69, Sum P(3) = 1.1e-69
Identities = 126/352 (35%), Positives = 194/352 (55%)
Query: 345 QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDY 404
+V +I TNRPD++D AL RPGR D +IEI +PN+Q R I + P + +
Sbjct: 468 KVIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGR-EQILNIFLSKIPNQLTSQ-EI 525
Query: 405 EAVVKLSDSFNGADLRNVCTEAGL--F-AIRSEREYVTQEDFMKAVRKVSDNKKLDHCNS 461
+ + F GAD+ ++C EA L F I++E + + Q ++ K + K+ ++ +
Sbjct: 526 AMIASKTHGFVGADIESLCKEASLKCFNRIKNENQKLFQSINIEKEEKGKEEKQEENLQN 585
Query: 462 YRT------EAGLFAIRSEREYVTQEDFMKAVR----KVSDNKKLESKLDYKPVIELPLL 511
+ L A+ + +E ++ + + + ++ KL K IE PL
Sbjct: 586 LLSLIKLSMNDMLLALNQVKPSSMREVVVEIPKVFWGDIGGQEHIKQKL--KEAIEWPLK 643
Query: 512 NPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARL 571
P+ F R+GI PPKG LLYGPPG KTLLA+A+A++ NF+ V ++ K++GES R
Sbjct: 644 YPQSFIRMGIKPPKGILLYGPPGCSKTLLAKALATESGLNFIAVKGPELLSKWVGESERA 703
Query: 572 IREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVK 631
+R++F AR + P I+F DEID + R EG+ A ++R + +LL +MDG L V
Sbjct: 704 VRDIFKKARQNSPSILFFDEIDGLAISRSGEGSGA---VERVVSQLLTEMDGIQPLTNVT 760
Query: 632 MIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGEI 683
+I ATNRPD +D A+LR GR+DR + I P+ AR EI IH + +I
Sbjct: 761 IIGATNRPDIIDKAILRAGRIDRILYISPPDLDARKEIFNIHLKKVPHSSDI 812
Score = 295 (108.9 bits), Expect = 4.8e-37, Sum P(2) = 4.8e-37
Identities = 67/198 (33%), Positives = 111/198 (56%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
++ K++GES R +R++F AR + P I+F DEID + R EG+ A ++R + +LL
Sbjct: 692 LLSKWVGESERAVRDIFKKARQNSPSILFFDEIDGLAISRSGEGSGA---VERVVSQLLT 748
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
+MDG L V +I ATNRPD +D A+LR GR+DR + I P+ AR +IH
Sbjct: 749 EMDGIQPLTNVTIIGATNRPDIIDKAILRAGRIDRILYISPPDLDARKEI---FNIHLKK 805
Query: 396 IAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE--REYVTQEDFMKA---VRKV 450
+ +ID + L+D ++GA++ ++C EA + A++ + + + F+ A V+K
Sbjct: 806 VPHSSDIDINQLSILTDGYSGAEVTSICREASIAAMKEDINAKEINMSHFISAIGNVKKG 865
Query: 451 SDNKKLDHCNSYRTEAGL 468
+ LD Y+ + L
Sbjct: 866 ITQEMLDFYKDYQENSNL 883
Score = 240 (89.5 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 63/205 (30%), Positives = 112/205 (54%)
Query: 430 AIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRK 489
+++ +++ + E F+K++ ++ ++ K+ NS ++ L + + + K
Sbjct: 245 SLKEKKDNIDNE-FIKSIFRICESTKIKLINS-NLQSTLICESTINSNNNNNN--NSNNK 300
Query: 490 VSDNKKLESK------LDY-----KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKT 538
+ +NK + LD + +I+L +L + G+ PPKG LLYGPPGTGKT
Sbjct: 301 IDNNKNINLNFQSIGGLDLQVKQIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKT 360
Query: 539 LLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGR 598
LLAR VA+Q +A + + I+DK+ G + + ++++F A P IIF+DE+DA+ +
Sbjct: 361 LLARIVATQTNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALCPK 420
Query: 599 RFSEGTSADREIQRTLMELLNQMDG 623
R E S++ E +R + LL MDG
Sbjct: 421 R--EDNSSEVE-KRIVGSLLTLMDG 442
Score = 189 (71.6 bits), Expect = 1.1e-69, Sum P(3) = 1.1e-69
Identities = 34/70 (48%), Positives = 50/70 (71%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++ + +IGGL Q++++RE+I+L +L + G+ PPKG LLYGPPGTGKTLLAR VA
Sbjct: 308 NLNFQSIGGLDLQVKQIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTLLARIVA 367
Query: 227 SQLDANFLKV 236
+Q +A +
Sbjct: 368 TQTNATLFTI 377
Score = 175 (66.7 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
Identities = 37/70 (52%), Positives = 49/70 (70%)
Query: 168 ITYSAIGGLSEQIRE-LREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
+ + IGG E I++ L+E IE PL P+ F R+GI PPKG LLYGPPG KTLLA+A+A
Sbjct: 619 VFWGDIGG-QEHIKQKLKEAIEWPLKYPQSFIRMGIKPPKGILLYGPPGCSKTLLAKALA 677
Query: 227 SQLDANFLKV 236
++ NF+ V
Sbjct: 678 TESGLNFIAV 687
Score = 106 (42.4 bits), Expect = 1.1e-69, Sum P(3) = 1.1e-69
Identities = 26/73 (35%), Positives = 43/73 (58%)
Query: 267 TYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI 326
T F + I+DK+ G + + ++++F A P IIF+DE+DA+ +R E S++ E
Sbjct: 373 TLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALCPKR--EDNSSEVE- 429
Query: 327 QRTLMELLNQMDG 339
+R + LL MDG
Sbjct: 430 KRIVGSLLTLMDG 442
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 544 (196.6 bits), Expect = 4.8e-56, Sum P(2) = 4.8e-56
Identities = 106/181 (58%), Positives = 134/181 (74%)
Query: 489 KVSDNKKLE-SKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQ 547
K +D L+ K + K +ELPL PEL++++GI PP G L+YGPPGTGKT+L +AVA++
Sbjct: 136 KYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANE 195
Query: 548 LDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSAD 607
F+ VV S V KY+GE R++R++F AR + P IIF+DE+DAI +RF T AD
Sbjct: 196 TQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQTGAD 255
Query: 608 REIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPN-EQAR 666
RE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE PLP+ +Q R
Sbjct: 256 REVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQKR 315
Query: 667 L 667
L
Sbjct: 316 L 316
Score = 432 (157.1 bits), Expect = 1.1e-69, Sum P(2) = 1.1e-69
Identities = 92/194 (47%), Positives = 122/194 (62%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + + T+ S V KY+GE R++R++F AR + P IIF+DE+DAI +R
Sbjct: 188 LVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKR 247
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F T ADRE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE P
Sbjct: 248 FDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFP 307
Query: 376 LPN-EQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE 434
LP+ +Q RL IS + +++ E+ V +D + AD+ + EAG+ AIR
Sbjct: 308 LPDRKQKRLIFQTIIS----KMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIRKN 363
Query: 435 REYVTQEDFMKAVR 448
R +T DF + R
Sbjct: 364 RYIITANDFEQGYR 377
Score = 305 (112.4 bits), Expect = 1.1e-69, Sum P(2) = 1.1e-69
Identities = 66/177 (37%), Positives = 105/177 (59%)
Query: 68 VREQLKELTKQYDKSENDLKALQSVGQV--SLSTSVSKCWTVIVKATNGPRYVVGCRRQL 125
++E+ K L ++ +S+N++K +QSV + + + IV +T G Y V L
Sbjct: 34 IKEEHKNLKRELIRSKNEIKRIQSVPLIIGQFLDIIDNNYG-IVSSTAGSNYYVRILSTL 92
Query: 126 DKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELRE 185
+K LK VAL + +I+ LP E D + + + ++ Y+ +GGL Q +E++E
Sbjct: 93 NKEDLKPSVSVALHRHSHSIVNILPSESDSSIQLLQITERPNVKYTDLGGLDMQKQEMKE 152
Query: 186 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
+ELPL PEL++++GI PP G L+YGPPGTGKT+L +AVA++ F+ VV S FV
Sbjct: 153 AVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFV 209
Score = 51 (23.0 bits), Expect = 4.8e-56, Sum P(2) = 4.8e-56
Identities = 9/25 (36%), Positives = 19/25 (76%)
Query: 34 MREQLKELTKQYDKSENDLKALQSV 58
++E+ K L ++ +S+N++K +QSV
Sbjct: 34 IKEEHKNLKRELIRSKNEIKRIQSV 58
Score = 51 (23.0 bits), Expect = 5.6e-29, Sum P(2) = 5.6e-29
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 465 EAGLFAIRSEREYVTQEDFMKAVR 488
EAG+ AIR R +T DF + R
Sbjct: 354 EAGMQAIRKNRYIITANDFEQGYR 377
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 544 (196.6 bits), Expect = 4.8e-56, Sum P(2) = 4.8e-56
Identities = 106/181 (58%), Positives = 134/181 (74%)
Query: 489 KVSDNKKLE-SKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQ 547
K +D L+ K + K +ELPL PEL++++GI PP G L+YGPPGTGKT+L +AVA++
Sbjct: 136 KYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANE 195
Query: 548 LDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSAD 607
F+ VV S V KY+GE R++R++F AR + P IIF+DE+DAI +RF T AD
Sbjct: 196 TQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQTGAD 255
Query: 608 REIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPN-EQAR 666
RE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE PLP+ +Q R
Sbjct: 256 REVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQKR 315
Query: 667 L 667
L
Sbjct: 316 L 316
Score = 432 (157.1 bits), Expect = 1.1e-69, Sum P(2) = 1.1e-69
Identities = 92/194 (47%), Positives = 122/194 (62%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + + T+ S V KY+GE R++R++F AR + P IIF+DE+DAI +R
Sbjct: 188 LVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKR 247
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F T ADRE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE P
Sbjct: 248 FDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFP 307
Query: 376 LPN-EQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE 434
LP+ +Q RL IS + +++ E+ V +D + AD+ + EAG+ AIR
Sbjct: 308 LPDRKQKRLIFQTIIS----KMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIRKN 363
Query: 435 REYVTQEDFMKAVR 448
R +T DF + R
Sbjct: 364 RYIITANDFEQGYR 377
Score = 305 (112.4 bits), Expect = 1.1e-69, Sum P(2) = 1.1e-69
Identities = 66/177 (37%), Positives = 105/177 (59%)
Query: 68 VREQLKELTKQYDKSENDLKALQSVGQV--SLSTSVSKCWTVIVKATNGPRYVVGCRRQL 125
++E+ K L ++ +S+N++K +QSV + + + IV +T G Y V L
Sbjct: 34 IKEEHKNLKRELIRSKNEIKRIQSVPLIIGQFLDIIDNNYG-IVSSTAGSNYYVRILSTL 92
Query: 126 DKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELRE 185
+K LK VAL + +I+ LP E D + + + ++ Y+ +GGL Q +E++E
Sbjct: 93 NKEDLKPSVSVALHRHSHSIVNILPSESDSSIQLLQITERPNVKYTDLGGLDMQKQEMKE 152
Query: 186 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
+ELPL PEL++++GI PP G L+YGPPGTGKT+L +AVA++ F+ VV S FV
Sbjct: 153 AVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFV 209
Score = 51 (23.0 bits), Expect = 4.8e-56, Sum P(2) = 4.8e-56
Identities = 9/25 (36%), Positives = 19/25 (76%)
Query: 34 MREQLKELTKQYDKSENDLKALQSV 58
++E+ K L ++ +S+N++K +QSV
Sbjct: 34 IKEEHKNLKRELIRSKNEIKRIQSV 58
Score = 51 (23.0 bits), Expect = 5.6e-29, Sum P(2) = 5.6e-29
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 465 EAGLFAIRSEREYVTQEDFMKAVR 488
EAG+ AIR R +T DF + R
Sbjct: 354 EAGMQAIRKNRYIITANDFEQGYR 377
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 104/201 (51%), Positives = 148/201 (73%)
Query: 485 KAVRKVSDNKKLESKLD--YKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLAR 542
K + SD L +++ ++ ++ LP+ + F+++G+ PPKGCL++GPPGTGKTLLAR
Sbjct: 179 KPTERYSDIGGLSKQIEELFEAIV-LPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLAR 237
Query: 543 AVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSE 602
A A+Q +A FLK+ + +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +RF
Sbjct: 238 ACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDS 297
Query: 603 GTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPN 662
+ DRE+QRT++ELLNQ+DGF S +VK+I ATNR DTLDPALLR GRLDRK+E PLPN
Sbjct: 298 EKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPN 357
Query: 663 EQARLEILKIHAGPIAKHGEI 683
E+AR+ IL+IH+ +A +I
Sbjct: 358 EEARVGILRIHSRKMAIDDDI 378
Score = 450 (163.5 bits), Expect = 3.5e-69, Sum P(2) = 3.5e-69
Identities = 90/199 (45%), Positives = 129/199 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R T+ + +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +R
Sbjct: 235 LARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKR 294
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F + DRE+QRT++ELLNQ+DGF S +VK+I ATNR DTLDPALLR GRLDRK+E P
Sbjct: 295 FDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFP 354
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNE+AR+ + IH+ +A +I++E + + +D +NGA L++VC EAG+ A+R
Sbjct: 355 LPNEEARVGI---LRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGD 411
Query: 436 EYVTQEDFMKAVRKVSDNK 454
+ E FM + +V K
Sbjct: 412 TKINHEHFMDGILEVQMRK 430
Score = 281 (104.0 bits), Expect = 3.5e-69, Sum P(2) = 3.5e-69
Identities = 72/217 (33%), Positives = 118/217 (54%)
Query: 27 VEGRLREMREQLKELTKQYDKSENDLKALQS-VGQHDLLLHCVREQLKELTKQYDKSEND 85
+E ++ M+ + + LT + +K Q + + +L + V ++ L Q D E D
Sbjct: 46 LENDIKVMKSEFQRLTHEKSTMLEKIKENQEKISNNKMLPYLVGNVVEILDMQPD--EVD 103
Query: 86 LKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTI 145
++ +S Q S +T V K + ++K + + ++ +L G + ++ + I
Sbjct: 104 VQ--ESANQNSEATRVGK--SAVIKTSTRQTIFLPLIGLVEPEELHPGDLIGVNKDSYLI 159
Query: 146 MRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPP 205
+ LP E D V M ++ YS IGGLS+QI EL E I LP+ + F+++G+ PP
Sbjct: 160 IDKLPSEYDSRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPP 219
Query: 206 KGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
KGCL++GPPGTGKTLLARA A+Q +A FLK+ + V
Sbjct: 220 KGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLV 256
Score = 54 (24.1 bits), Expect = 3.1e-23, Sum P(2) = 3.1e-23
Identities = 17/76 (22%), Positives = 30/76 (39%)
Query: 419 LRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYV 478
L N G+ I S + + + + + + +D S EAG+ A+R +
Sbjct: 355 LPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKI 414
Query: 479 TQEDFMKAVRKVSDNK 494
E FM + +V K
Sbjct: 415 NHEHFMDGILEVQMRK 430
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 102/191 (53%), Positives = 137/191 (71%)
Query: 485 KAVRKVSDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARA 543
+ + SD L+ ++ + I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA
Sbjct: 145 RPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 204
Query: 544 VASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEG 603
A+Q A FLK+ +V +IG+ A+L+R+ F+ A+ P IIF+DE+DAIG +RF
Sbjct: 205 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSE 264
Query: 604 TSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE 663
+ DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDRKIE P+PNE
Sbjct: 265 KAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNE 324
Query: 664 QARLEILKIHA 674
+AR I++IH+
Sbjct: 325 EARARIMQIHS 335
Score = 459 (166.6 bits), Expect = 4.6e-69, Sum P(2) = 4.6e-69
Identities = 91/200 (45%), Positives = 129/200 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R + T+ +V +IG+ A+L+R+ F+ A+ P IIF+DE+DAIG +R
Sbjct: 201 LARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKR 260
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F + DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDRKIE P
Sbjct: 261 FDSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFP 320
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
+PNE+AR A + IH+ + +++YE + + +D FNGA + VC EAG+ A+R
Sbjct: 321 MPNEEAR-ARI--MQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGA 377
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
+T ED+M+ + +V KK
Sbjct: 378 TELTHEDYMEGILEVQAKKK 397
Score = 270 (100.1 bits), Expect = 4.6e-69, Sum P(2) = 4.6e-69
Identities = 72/218 (33%), Positives = 112/218 (51%)
Query: 27 VEGRLREMREQLKELTKQYDKSENDLKA-LQSVGQHDLLLHCVREQLKELTKQYDKSEND 85
++ ++ M+ ++ +T + + +K + + + L + V ++ L D ND
Sbjct: 13 LDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLVSNVIELL----DVDPND 68
Query: 86 LKALQSVGQVSL-STSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLT 144
+ + + L S KC ++K + Y + +D KLK G V ++ +
Sbjct: 69 QE--EDGANIDLDSQRKGKC--AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYL 124
Query: 145 IMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITP 204
I+ LP E D V M ++ YS IGGL +QI+EL E I LP+ + E F+ +GI P
Sbjct: 125 ILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQP 184
Query: 205 PKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
PKG L+YGPPGTGKTLLARA A+Q A FLK+ V
Sbjct: 185 PKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLV 222
Score = 76 (31.8 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 426 AGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
A + I S + V+ + + + + +D+ C + EAG+ A+R +T ED+M+
Sbjct: 328 ARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGATELTHEDYME 387
Query: 486 AVRKVSDNKKLESKLDY 502
+ +V KK + L Y
Sbjct: 388 GILEVQAKKK--ANLQY 402
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 518 (187.4 bits), Expect = 3.4e-53, Sum P(2) = 3.4e-53
Identities = 101/186 (54%), Positives = 134/186 (72%)
Query: 499 KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 558
K + + +ELPL + +L++++GI PP+G LLYGPPGTGKT+L +AVA+ A+F++V S
Sbjct: 175 KQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGS 234
Query: 559 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 618
V KY+GE R++R++F AR + P IIF+DEIDAI +RF T ADRE+QR L+ELL
Sbjct: 235 EFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELL 294
Query: 619 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP-LPNEQARLEILKIHAGPI 677
NQMDGF+ VK+IMATNR DTLDPALLRPGRLDRKIE P L + + R I A +
Sbjct: 295 NQMDGFEQTSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFSTIASKM 354
Query: 678 AKHGEI 683
+ E+
Sbjct: 355 SLSPEV 360
Score = 411 (149.7 bits), Expect = 5.3e-69, Sum P(2) = 5.3e-69
Identities = 88/191 (46%), Positives = 118/191 (61%)
Query: 274 SAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMEL 333
S V KY+GE R++R++F AR + P IIF+DEIDAI +RF T ADRE+QR L+EL
Sbjct: 234 SEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLEL 293
Query: 334 LNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHA 393
LNQMDGF+ VK+IMATNR DTLDPALLRPGRLDRKIE P + R S A
Sbjct: 294 LNQMDGFEQTSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRD--RRERRLIFSTIA 351
Query: 394 GPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVR-KVSD 452
++ E+D ++++ ++ +GA + + EAGL A+R R + Q D A +V
Sbjct: 352 SKMSLSPEVDLDSLIVRNEPLSGAVIAAIMQEAGLRAVRKNRYNIIQSDLEDAYSAQVKT 411
Query: 453 NKKLDHCNSYR 463
++ D YR
Sbjct: 412 GQEADRLEFYR 422
Score = 321 (118.1 bits), Expect = 5.3e-69, Sum P(2) = 5.3e-69
Identities = 66/177 (37%), Positives = 112/177 (63%)
Query: 68 VREQLKELTKQYDKSENDLKALQSVGQV--SLSTSVSKCWTVIVKATNGPRYVVGCRRQL 125
++++ + L ++ +++ ++K +QSV V ++ + T IV+++ G YVV L
Sbjct: 62 IKDEQRSLKRELVRAQEEIKRIQSVPLVIGQFMEAIDQN-TGIVQSSTGSNYVVRILSTL 120
Query: 126 DKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELRE 185
D+ KLK + VAL + ++ LP E D + + + D+TY+ +GGL Q +E+RE
Sbjct: 121 DREKLKPSSSVALHRHSNALVDILPPEADSSIAMLGENEKPDVTYADVGGLDMQKQEIRE 180
Query: 186 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
+ELPL + +L++++GI PP+G LLYGPPGTGKT+L +AVA+ A+F++V S FV
Sbjct: 181 AVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGSEFV 237
Score = 51 (23.0 bits), Expect = 3.4e-53, Sum P(2) = 3.4e-53
Identities = 12/42 (28%), Positives = 27/42 (64%)
Query: 19 KKLTEHAEVEGRLRE--MREQLKELTKQYDKSENDLKALQSV 58
KKL H E +L+E ++++ + L ++ +++ ++K +QSV
Sbjct: 46 KKLQRHLEYI-KLQEEYIKDEQRSLKRELVRAQEEIKRIQSV 86
Score = 43 (20.2 bits), Expect = 7.0e-30, Sum P(2) = 7.0e-30
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 465 EAGLFAIRSEREYVTQEDFMKA 486
EAGL A+R R + Q D A
Sbjct: 383 EAGLRAVRKNRYNIIQSDLEDA 404
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 98/184 (53%), Positives = 139/184 (75%)
Query: 496 LESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 554
LES++ + K +ELPL +PEL++ +GI PPKG +LYG PGTGKTLLA+AVA+Q A FL+
Sbjct: 191 LESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLR 250
Query: 555 VVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 614
+V S ++ KY+G+ RL R++F A +H P I+F+DEIDAIG +R+ + +REIQRT+
Sbjct: 251 IVGSELIQKYLGDGPRLCRQIFQIAADHAPSIVFIDEIDAIGTKRYESTSGGEREIQRTM 310
Query: 615 MELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+ELLNQ+DGFD G +K+IMATN+ ++LDPAL+RPGR+DRKI P+ + +IL IH
Sbjct: 311 LELLNQLDGFDDRGDIKVIMATNKIESLDPALIRPGRIDRKILFENPDANTKKKILTIHT 370
Query: 675 GPIA 678
++
Sbjct: 371 SKMS 374
Score = 437 (158.9 bits), Expect = 5.6e-69, Sum P(2) = 5.6e-69
Identities = 85/201 (42%), Positives = 129/201 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + T+ S ++ KY+G+ RL R++F A +H P I+F+DEIDAIG +R
Sbjct: 236 LAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIAADHAPSIVFIDEIDAIGTKR 295
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKI--E 373
+ + +REIQRT++ELLNQ+DGFD G +K+IMATN+ ++LDPAL+RPGR+DRKI E
Sbjct: 296 YESTSGGEREIQRTMLELLNQLDGFDDRGDIKVIMATNKIESLDPALIRPGRIDRKILFE 355
Query: 374 IPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRS 433
P N + ++ ++IH ++ +++ + +V D +GAD++ +CTEAGL A+R
Sbjct: 356 NPDANTKKKI-----LTIHTSKMSLADDVNLDEIVTGKDDLSGADIKAICTEAGLLALRE 410
Query: 434 EREYVTQEDFMKAVRKVSDNK 454
R V EDF A +V NK
Sbjct: 411 RRMQVKAEDFKSAKERVLKNK 431
Score = 293 (108.2 bits), Expect = 5.6e-69, Sum P(2) = 5.6e-69
Identities = 60/132 (45%), Positives = 84/132 (63%)
Query: 108 IVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGD 167
IV +T Y V +DK L+ G V L T+ ++ L + DP+V M +
Sbjct: 123 IVSSTASSEYYVSIMSFVDKGLLEPGCSVLLHHKTVAVVGVLQDDADPMVSVMKLDKSPT 182
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+Y+ IGGL QI+E++E +ELPL +PEL++ +GI PPKG +LYG PGTGKTLLA+AVA+
Sbjct: 183 ESYADIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 242
Query: 228 QLDANFLKVVSS 239
Q A FL++V S
Sbjct: 243 QTSATFLRIVGS 254
Score = 74 (31.1 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 464 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLD 501
TEAGL A+R R V EDF A +V NK +E L+
Sbjct: 401 TEAGLLALRERRMQVKAEDFKSAKERVLKNK-VEENLE 437
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 102/191 (53%), Positives = 136/191 (71%)
Query: 485 KAVRKVSDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARA 543
+ + SD L+ ++ + I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA
Sbjct: 187 RPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 246
Query: 544 VASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEG 603
A+Q A FLK+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +RF
Sbjct: 247 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSE 306
Query: 604 TSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE 663
+ DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDRKIE P+PNE
Sbjct: 307 KAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNE 366
Query: 664 QARLEILKIHA 674
+AR I++IH+
Sbjct: 367 EARARIMQIHS 377
Score = 452 (164.2 bits), Expect = 6.8e-69, Sum P(2) = 6.8e-69
Identities = 91/200 (45%), Positives = 128/200 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R + T+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +R
Sbjct: 243 LARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKR 302
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F + DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDRKIE P
Sbjct: 303 FDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFP 362
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
+PNE+AR A + IH+ + +++YE + + +D FNGA + VC EAG+ A+R
Sbjct: 363 MPNEEAR-ARI--MQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 419
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
+T ED+M+ + +V KK
Sbjct: 420 TELTHEDYMEGILEVQAKKK 439
Score = 276 (102.2 bits), Expect = 6.8e-69, Sum P(2) = 6.8e-69
Identities = 83/248 (33%), Positives = 124/248 (50%)
Query: 1 MTTPVVDEVRHKTL-QDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVG 59
M T V DE + ++ K TE E+ R R + ++K + + + ++L+A++
Sbjct: 24 MAT-VWDEAEQDGIGEEVLKMSTE--EIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKI 80
Query: 60 QHDLLLHCVREQLKELTKQY----DKSENDLKALQSVGQVSL-STSVSKCWTVIVKATNG 114
+ + V + L L D ND + + + L S KC ++K +
Sbjct: 81 KENSEKIKVNKTLPYLVSNVIELLDVDPNDQE--EDGANIDLDSQRKGKC--AVIKTSTR 136
Query: 115 PRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIG 174
Y + +D KLK G V ++ + I+ LP E D V M ++ YS IG
Sbjct: 137 QTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIG 196
Query: 175 GLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFL 234
GL +QI+EL E I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FL
Sbjct: 197 GLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFL 256
Query: 235 KVVSSLFV 242
K+ V
Sbjct: 257 KLAGPQLV 264
Score = 76 (31.8 bits), Expect = 8.2e-25, Sum P(2) = 8.2e-25
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 426 AGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
A + I S + V+ + + + + +D+ C + EAG+ A+R +T ED+M+
Sbjct: 370 ARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYME 429
Query: 486 AVRKVSDNKKLESKLDY 502
+ +V KK + L Y
Sbjct: 430 GILEVQAKKK--ANLQY 444
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 102/191 (53%), Positives = 136/191 (71%)
Query: 485 KAVRKVSDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARA 543
+ + SD L+ ++ + I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA
Sbjct: 183 RPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 242
Query: 544 VASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEG 603
A+Q A FLK+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +RF
Sbjct: 243 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSE 302
Query: 604 TSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE 663
+ DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDRKIE P+PNE
Sbjct: 303 KAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNE 362
Query: 664 QARLEILKIHA 674
+AR I++IH+
Sbjct: 363 EARARIMQIHS 373
Score = 452 (164.2 bits), Expect = 6.8e-69, Sum P(2) = 6.8e-69
Identities = 91/200 (45%), Positives = 128/200 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R + T+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +R
Sbjct: 239 LARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKR 298
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F + DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDRKIE P
Sbjct: 299 FDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFP 358
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
+PNE+AR A + IH+ + +++YE + + +D FNGA + VC EAG+ A+R
Sbjct: 359 MPNEEAR-ARI--MQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 415
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
+T ED+M+ + +V KK
Sbjct: 416 TELTHEDYMEGILEVQAKKK 435
Score = 276 (102.2 bits), Expect = 6.8e-69, Sum P(2) = 6.8e-69
Identities = 83/248 (33%), Positives = 124/248 (50%)
Query: 1 MTTPVVDEVRHKTL-QDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVG 59
M T V DE + ++ K TE E+ R R + ++K + + + ++L+A++
Sbjct: 20 MAT-VWDEAEQDGIGEEVLKMSTE--EIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKI 76
Query: 60 QHDLLLHCVREQLKELTKQY----DKSENDLKALQSVGQVSL-STSVSKCWTVIVKATNG 114
+ + V + L L D ND + + + L S KC ++K +
Sbjct: 77 KENSEKIKVNKTLPYLVSNVIELLDVDPNDQE--EDGANIDLDSQRKGKC--AVIKTSTR 132
Query: 115 PRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIG 174
Y + +D KLK G V ++ + I+ LP E D V M ++ YS IG
Sbjct: 133 QTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIG 192
Query: 175 GLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFL 234
GL +QI+EL E I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FL
Sbjct: 193 GLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFL 252
Query: 235 KVVSSLFV 242
K+ V
Sbjct: 253 KLAGPQLV 260
Score = 76 (31.8 bits), Expect = 7.3e-25, Sum P(2) = 7.3e-25
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 426 AGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
A + I S + V+ + + + + +D+ C + EAG+ A+R +T ED+M+
Sbjct: 366 ARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYME 425
Query: 486 AVRKVSDNKKLESKLDY 502
+ +V KK + L Y
Sbjct: 426 GILEVQAKKK--ANLQY 440
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 102/191 (53%), Positives = 136/191 (71%)
Query: 485 KAVRKVSDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARA 543
+ + SD L+ ++ + I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA
Sbjct: 180 RPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 239
Query: 544 VASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEG 603
A+Q A FLK+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +RF
Sbjct: 240 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSE 299
Query: 604 TSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE 663
+ DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDRKIE P+PNE
Sbjct: 300 KAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNE 359
Query: 664 QARLEILKIHA 674
+AR I++IH+
Sbjct: 360 EARARIMQIHS 370
Score = 452 (164.2 bits), Expect = 6.8e-69, Sum P(2) = 6.8e-69
Identities = 91/200 (45%), Positives = 128/200 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R + T+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +R
Sbjct: 236 LARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKR 295
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F + DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDRKIE P
Sbjct: 296 FDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFP 355
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
+PNE+AR A + IH+ + +++YE + + +D FNGA + VC EAG+ A+R
Sbjct: 356 MPNEEAR-ARI--MQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 412
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
+T ED+M+ + +V KK
Sbjct: 413 TELTHEDYMEGILEVQAKKK 432
Score = 276 (102.2 bits), Expect = 6.8e-69, Sum P(2) = 6.8e-69
Identities = 83/248 (33%), Positives = 124/248 (50%)
Query: 1 MTTPVVDEVRHKTL-QDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVG 59
M T V DE + ++ K TE E+ R R + ++K + + + ++L+A++
Sbjct: 17 MAT-VWDEAEQDGIGEEVLKMSTE--EIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKI 73
Query: 60 QHDLLLHCVREQLKELTKQY----DKSENDLKALQSVGQVSL-STSVSKCWTVIVKATNG 114
+ + V + L L D ND + + + L S KC ++K +
Sbjct: 74 KENSEKIKVNKTLPYLVSNVIELLDVDPNDQE--EDGANIDLDSQRKGKC--AVIKTSTR 129
Query: 115 PRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIG 174
Y + +D KLK G V ++ + I+ LP E D V M ++ YS IG
Sbjct: 130 QTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIG 189
Query: 175 GLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFL 234
GL +QI+EL E I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FL
Sbjct: 190 GLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFL 249
Query: 235 KVVSSLFV 242
K+ V
Sbjct: 250 KLAGPQLV 257
Score = 76 (31.8 bits), Expect = 6.7e-25, Sum P(2) = 6.7e-25
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 426 AGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
A + I S + V+ + + + + +D+ C + EAG+ A+R +T ED+M+
Sbjct: 363 ARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYME 422
Query: 486 AVRKVSDNKKLESKLDY 502
+ +V KK + L Y
Sbjct: 423 GILEVQAKKK--ANLQY 437
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 102/191 (53%), Positives = 136/191 (71%)
Query: 485 KAVRKVSDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARA 543
+ + SD L+ ++ + I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA
Sbjct: 183 RPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 242
Query: 544 VASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEG 603
A+Q A FLK+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +RF
Sbjct: 243 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSE 302
Query: 604 TSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE 663
+ DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDRKIE P+PNE
Sbjct: 303 KAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNE 362
Query: 664 QARLEILKIHA 674
+AR I++IH+
Sbjct: 363 EARARIMQIHS 373
Score = 452 (164.2 bits), Expect = 6.8e-69, Sum P(2) = 6.8e-69
Identities = 91/200 (45%), Positives = 128/200 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R + T+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +R
Sbjct: 239 LARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKR 298
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F + DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDRKIE P
Sbjct: 299 FDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFP 358
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
+PNE+AR A + IH+ + +++YE + + +D FNGA + VC EAG+ A+R
Sbjct: 359 MPNEEAR-ARI--MQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 415
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
+T ED+M+ + +V KK
Sbjct: 416 TELTHEDYMEGILEVQAKKK 435
Score = 276 (102.2 bits), Expect = 6.8e-69, Sum P(2) = 6.8e-69
Identities = 83/248 (33%), Positives = 124/248 (50%)
Query: 1 MTTPVVDEVRHKTL-QDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVG 59
M T V DE + ++ K TE E+ R R + ++K + + + ++L+A++
Sbjct: 20 MAT-VWDEAEQDGIGEEVLKMSTE--EIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKI 76
Query: 60 QHDLLLHCVREQLKELTKQY----DKSENDLKALQSVGQVSL-STSVSKCWTVIVKATNG 114
+ + V + L L D ND + + + L S KC ++K +
Sbjct: 77 KENSEKIKVNKTLPYLVSNVIELLDVDPNDQE--EDGANIDLDSQRKGKC--AVIKTSTR 132
Query: 115 PRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIG 174
Y + +D KLK G V ++ + I+ LP E D V M ++ YS IG
Sbjct: 133 QTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIG 192
Query: 175 GLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFL 234
GL +QI+EL E I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FL
Sbjct: 193 GLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFL 252
Query: 235 KVVSSLFV 242
K+ V
Sbjct: 253 KLAGPQLV 260
Score = 76 (31.8 bits), Expect = 7.3e-25, Sum P(2) = 7.3e-25
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 426 AGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
A + I S + V+ + + + + +D+ C + EAG+ A+R +T ED+M+
Sbjct: 366 ARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYME 425
Query: 486 AVRKVSDNKKLESKLDY 502
+ +V KK + L Y
Sbjct: 426 GILEVQAKKK--ANLQY 440
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 394 (143.8 bits), Expect = 5.6e-33, P = 5.6e-33
Identities = 89/230 (38%), Positives = 143/230 (62%)
Query: 444 MKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVS--DNKKLESKLD 501
+K + + S+N++ C ++ L +E EY+ +ED+ + ++ D ++ +L+
Sbjct: 484 LKIISEESENEEFG-CIGEHSQLTL----AE-EYLKREDYEENNDDITYEDLGGMKKQLN 537
Query: 502 -YKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ +IELPL PE+F +GI+ PKG L++G PGTGKT +A+A+A++ +A + I
Sbjct: 538 KIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEI 597
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
+ K+IGES + +R++F A PCIIF+DEID+I +R ++ R + +LL
Sbjct: 598 MSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNELEK---RVVSQLLTL 654
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEIL 670
MDG V ++ ATNRP+++DPAL R GR DR+IEIP+P+EQ R EIL
Sbjct: 655 MDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEIL 704
Score = 352 (129.0 bits), Expect = 7.1e-69, Sum P(3) = 7.1e-69
Identities = 87/221 (39%), Positives = 125/221 (56%)
Query: 497 ESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 556
E K K I PL L+ + KG LLYGPPG GKTLLA+A+A++ ANF+ V
Sbjct: 941 EVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVK 1000
Query: 557 SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLME 616
++ + GES +R++F+ AR PCIIF DEID++ R S T+ D R + +
Sbjct: 1001 GPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNSN-TNNDAS-DRVINQ 1058
Query: 617 LLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHA 674
+L ++DG + + +I ATNRPD LD AL RPGRLD+ I I LP+ ++R I K +
Sbjct: 1059 ILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKN 1118
Query: 675 GPIAKHGEIGDAATKWVLPFTAGGFIYIATVSVIPELLEDT 715
P+ + +I D A K F+ G I S + E +++T
Sbjct: 1119 TPLNEDVDIHDMA-KRTEGFS-GADITNLCQSAVNEAIKET 1157
Score = 283 (104.7 bits), Expect = 7.1e-69, Sum P(3) = 7.1e-69
Identities = 66/184 (35%), Positives = 106/184 (57%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
I+ K+IGES + +R++F A PCIIF+DEID+I +R ++ R + +LL
Sbjct: 597 IMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNELEK---RVVSQLLT 653
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
MDG V ++ ATNRP+++DPAL R GR DR+IEIP+P+EQ R + I +
Sbjct: 654 LMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGR----YEILLTKTK 709
Query: 396 IAK-HGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVT--QEDFMKAVR-KVS 451
K +++ + K + GADL +C EA + I+ ++ +EDF++ ++ V
Sbjct: 710 KMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHIHFLDLDEEDFIEFMKISVD 769
Query: 452 DNKK 455
++KK
Sbjct: 770 EDKK 773
Score = 263 (97.6 bits), Expect = 2.4e-34, Sum P(2) = 2.4e-34
Identities = 70/218 (32%), Positives = 118/218 (54%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
++ + GES +R++F+ AR PCIIF DEID++ R S T+ D R + ++L
Sbjct: 1004 LLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNSN-TNNDAS-DRVINQILT 1061
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
++DG + + +I ATNRPD LD AL RPGRLD+ I I LP+ ++R + + + P
Sbjct: 1062 EIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYS-IFKAILKNTP 1120
Query: 396 IAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVT-QEDFMKAVRKVSDNK 454
+ + ++D + K ++ F+GAD+ N+C A AI+ + ++ + RK + N
Sbjct: 1121 LNE--DVDIHDMAKRTEGFSGADITNLCQSAVNEAIKETIHLLNIRKKEQEEQRKKNKNS 1178
Query: 455 -KLDHCNSYRTEAGL------FAIRSEREYVTQEDFMK 485
K+D ++Y L A ++ R + ED +K
Sbjct: 1179 FKIDDTDTYDPVPTLSKKHFDLAFKNARISIQPEDVLK 1216
Score = 201 (75.8 bits), Expect = 7.1e-69, Sum P(3) = 7.1e-69
Identities = 37/83 (44%), Positives = 61/83 (73%)
Query: 163 EDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLA 222
E+ DITY +GG+ +Q+ ++RE+IELPL PE+F +GI+ PKG L++G PGTGKT +A
Sbjct: 519 ENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIA 578
Query: 223 RAVASQLDANFLKVVSSLFVTSK 245
+A+A++ +A + +++ + SK
Sbjct: 579 KAIANESNA-YCYIINGPEIMSK 600
Score = 161 (61.7 bits), Expect = 3.7e-30, Sum P(2) = 3.7e-30
Identities = 32/69 (46%), Positives = 46/69 (66%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+T++ IGG++E +L+E I PL L+ + KG LLYGPPG GKTLLA+A+A+
Sbjct: 931 VTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIAN 990
Query: 228 QLDANFLKV 236
+ ANF+ V
Sbjct: 991 ECKANFISV 999
Score = 38 (18.4 bits), Expect = 4.8e-27, Sum P(2) = 4.8e-27
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 29 GRLREMREQLKE 40
G + E++EQLKE
Sbjct: 937 GGMNEVKEQLKE 948
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 394 (143.8 bits), Expect = 5.6e-33, P = 5.6e-33
Identities = 89/230 (38%), Positives = 143/230 (62%)
Query: 444 MKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVS--DNKKLESKLD 501
+K + + S+N++ C ++ L +E EY+ +ED+ + ++ D ++ +L+
Sbjct: 484 LKIISEESENEEFG-CIGEHSQLTL----AE-EYLKREDYEENNDDITYEDLGGMKKQLN 537
Query: 502 -YKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ +IELPL PE+F +GI+ PKG L++G PGTGKT +A+A+A++ +A + I
Sbjct: 538 KIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEI 597
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
+ K+IGES + +R++F A PCIIF+DEID+I +R ++ R + +LL
Sbjct: 598 MSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNELEK---RVVSQLLTL 654
Query: 621 MDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEIL 670
MDG V ++ ATNRP+++DPAL R GR DR+IEIP+P+EQ R EIL
Sbjct: 655 MDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEIL 704
Score = 352 (129.0 bits), Expect = 7.1e-69, Sum P(3) = 7.1e-69
Identities = 87/221 (39%), Positives = 125/221 (56%)
Query: 497 ESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 556
E K K I PL L+ + KG LLYGPPG GKTLLA+A+A++ ANF+ V
Sbjct: 941 EVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVK 1000
Query: 557 SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLME 616
++ + GES +R++F+ AR PCIIF DEID++ R S T+ D R + +
Sbjct: 1001 GPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNSN-TNNDAS-DRVINQ 1058
Query: 617 LLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHA 674
+L ++DG + + +I ATNRPD LD AL RPGRLD+ I I LP+ ++R I K +
Sbjct: 1059 ILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKN 1118
Query: 675 GPIAKHGEIGDAATKWVLPFTAGGFIYIATVSVIPELLEDT 715
P+ + +I D A K F+ G I S + E +++T
Sbjct: 1119 TPLNEDVDIHDMA-KRTEGFS-GADITNLCQSAVNEAIKET 1157
Score = 283 (104.7 bits), Expect = 7.1e-69, Sum P(3) = 7.1e-69
Identities = 66/184 (35%), Positives = 106/184 (57%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
I+ K+IGES + +R++F A PCIIF+DEID+I +R ++ R + +LL
Sbjct: 597 IMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNELEK---RVVSQLLT 653
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
MDG V ++ ATNRP+++DPAL R GR DR+IEIP+P+EQ R + I +
Sbjct: 654 LMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGR----YEILLTKTK 709
Query: 396 IAK-HGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVT--QEDFMKAVR-KVS 451
K +++ + K + GADL +C EA + I+ ++ +EDF++ ++ V
Sbjct: 710 KMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHIHFLDLDEEDFIEFMKISVD 769
Query: 452 DNKK 455
++KK
Sbjct: 770 EDKK 773
Score = 263 (97.6 bits), Expect = 2.4e-34, Sum P(2) = 2.4e-34
Identities = 70/218 (32%), Positives = 118/218 (54%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
++ + GES +R++F+ AR PCIIF DEID++ R S T+ D R + ++L
Sbjct: 1004 LLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNSN-TNNDAS-DRVINQILT 1061
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
++DG + + +I ATNRPD LD AL RPGRLD+ I I LP+ ++R + + + P
Sbjct: 1062 EIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYS-IFKAILKNTP 1120
Query: 396 IAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVT-QEDFMKAVRKVSDNK 454
+ + ++D + K ++ F+GAD+ N+C A AI+ + ++ + RK + N
Sbjct: 1121 LNE--DVDIHDMAKRTEGFSGADITNLCQSAVNEAIKETIHLLNIRKKEQEEQRKKNKNS 1178
Query: 455 -KLDHCNSYRTEAGL------FAIRSEREYVTQEDFMK 485
K+D ++Y L A ++ R + ED +K
Sbjct: 1179 FKIDDTDTYDPVPTLSKKHFDLAFKNARISIQPEDVLK 1216
Score = 201 (75.8 bits), Expect = 7.1e-69, Sum P(3) = 7.1e-69
Identities = 37/83 (44%), Positives = 61/83 (73%)
Query: 163 EDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLA 222
E+ DITY +GG+ +Q+ ++RE+IELPL PE+F +GI+ PKG L++G PGTGKT +A
Sbjct: 519 ENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIA 578
Query: 223 RAVASQLDANFLKVVSSLFVTSK 245
+A+A++ +A + +++ + SK
Sbjct: 579 KAIANESNA-YCYIINGPEIMSK 600
Score = 161 (61.7 bits), Expect = 3.7e-30, Sum P(2) = 3.7e-30
Identities = 32/69 (46%), Positives = 46/69 (66%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+T++ IGG++E +L+E I PL L+ + KG LLYGPPG GKTLLA+A+A+
Sbjct: 931 VTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIAN 990
Query: 228 QLDANFLKV 236
+ ANF+ V
Sbjct: 991 ECKANFISV 999
Score = 38 (18.4 bits), Expect = 4.8e-27, Sum P(2) = 4.8e-27
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 29 GRLREMREQLKE 40
G + E++EQLKE
Sbjct: 937 GGMNEVKEQLKE 948
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 102/191 (53%), Positives = 136/191 (71%)
Query: 485 KAVRKVSDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARA 543
+ + SD L+ ++ + I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA
Sbjct: 180 RPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 239
Query: 544 VASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEG 603
A+Q A FLK+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +RF
Sbjct: 240 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSE 299
Query: 604 TSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE 663
+ DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDRKIE P+PNE
Sbjct: 300 KAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNE 359
Query: 664 QARLEILKIHA 674
+AR I++IH+
Sbjct: 360 EARARIMQIHS 370
Score = 452 (164.2 bits), Expect = 8.7e-69, Sum P(2) = 8.7e-69
Identities = 91/200 (45%), Positives = 128/200 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R + T+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +R
Sbjct: 236 LARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKR 295
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F + DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDRKIE P
Sbjct: 296 FDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFP 355
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
+PNE+AR A + IH+ + +++YE + + +D FNGA + VC EAG+ A+R
Sbjct: 356 MPNEEAR-ARI--MQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 412
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
+T ED+M+ + +V KK
Sbjct: 413 TELTHEDYMEGILEVQAKKK 432
Score = 275 (101.9 bits), Expect = 8.7e-69, Sum P(2) = 8.7e-69
Identities = 83/248 (33%), Positives = 124/248 (50%)
Query: 1 MTTPVVDEVRHKTL-QDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVG 59
M T V DE + ++ K TE E+ R R + ++K + + + ++L+A++
Sbjct: 17 MAT-VWDEAEQDGIGEEVLKMSTE--EIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKI 73
Query: 60 QHDLLLHCVREQLKELTKQY----DKSENDLKALQSVGQVSL-STSVSKCWTVIVKATNG 114
+ + V + L L D ND + + + L S KC ++K +
Sbjct: 74 KENSEKIKVNKTLPYLVSNVIELLDVDPNDQE--EDGANIDLDSQRKGKC--AVIKTSTR 129
Query: 115 PRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIG 174
Y + +D KLK G V ++ + I+ LP E D V M ++ YS IG
Sbjct: 130 QTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIG 189
Query: 175 GLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFL 234
GL +QI+EL E I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FL
Sbjct: 190 GLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFL 249
Query: 235 KVVSSLFV 242
K+ V
Sbjct: 250 KLAGPQLV 257
Score = 76 (31.8 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 426 AGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
A + I S + V+ + + + + +D+ C + EAG+ A+R +T ED+M+
Sbjct: 363 ARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYME 422
Query: 486 AVRKVSDNKKLESKLDY 502
+ +V KK + L Y
Sbjct: 423 GILEVQAKKK--ANLQY 437
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 102/191 (53%), Positives = 136/191 (71%)
Query: 485 KAVRKVSDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARA 543
+ + SD L+ ++ + I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA
Sbjct: 180 RPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 239
Query: 544 VASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEG 603
A+Q A FLK+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +RF
Sbjct: 240 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSE 299
Query: 604 TSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE 663
+ DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDRKIE P+PNE
Sbjct: 300 KAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNE 359
Query: 664 QARLEILKIHA 674
+AR I++IH+
Sbjct: 360 EARARIMQIHS 370
Score = 452 (164.2 bits), Expect = 8.7e-69, Sum P(2) = 8.7e-69
Identities = 91/200 (45%), Positives = 128/200 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R + T+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +R
Sbjct: 236 LARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKR 295
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F + DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDRKIE P
Sbjct: 296 FDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFP 355
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
+PNE+AR A + IH+ + +++YE + + +D FNGA + VC EAG+ A+R
Sbjct: 356 MPNEEAR-ARI--MQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 412
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
+T ED+M+ + +V KK
Sbjct: 413 TELTHEDYMEGILEVQAKKK 432
Score = 275 (101.9 bits), Expect = 8.7e-69, Sum P(2) = 8.7e-69
Identities = 83/248 (33%), Positives = 124/248 (50%)
Query: 1 MTTPVVDEVRHKTL-QDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVG 59
M T V DE + ++ K TE E+ R R + ++K + + + ++L+A++
Sbjct: 17 MAT-VWDEAEQDGIGEEVLKMSTE--EIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKI 73
Query: 60 QHDLLLHCVREQLKELTKQY----DKSENDLKALQSVGQVSL-STSVSKCWTVIVKATNG 114
+ + V + L L D ND + + + L S KC ++K +
Sbjct: 74 KENSEKIKVNKTLPYLVSNVIELLDVDPNDQE--EDGANIDLDSQRKGKC--AVIKTSTR 129
Query: 115 PRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIG 174
Y + +D KLK G V ++ + I+ LP E D V M ++ YS IG
Sbjct: 130 QTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIG 189
Query: 175 GLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFL 234
GL +QI+EL E I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FL
Sbjct: 190 GLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFL 249
Query: 235 KVVSSLFV 242
K+ V
Sbjct: 250 KLAGPQLV 257
Score = 76 (31.8 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 426 AGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
A + I S + V+ + + + + +D+ C + EAG+ A+R +T ED+M+
Sbjct: 363 ARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYME 422
Query: 486 AVRKVSDNKKLESKLDY 502
+ +V KK + L Y
Sbjct: 423 GILEVQAKKK--ANLQY 437
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 102/191 (53%), Positives = 137/191 (71%)
Query: 485 KAVRKVSDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARA 543
K + SD L+ ++ + + LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA
Sbjct: 162 KPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLARA 221
Query: 544 VASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEG 603
A+Q ++ +LK+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +RF
Sbjct: 222 CAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFDSE 281
Query: 604 TSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE 663
S DRE+QRT++ELLNQ+DGF S +K+I ATNR D LDPALLR GRLDRKIE PLPNE
Sbjct: 282 VSGDREVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPNE 341
Query: 664 QARLEILKIHA 674
+AR IL+IH+
Sbjct: 342 EARAHILQIHS 352
Score = 448 (162.8 bits), Expect = 9.4e-69, Sum P(2) = 9.4e-69
Identities = 91/200 (45%), Positives = 126/200 (63%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R TY +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +R
Sbjct: 218 LARACAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKR 277
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F S DRE+QRT++ELLNQ+DGF S +K+I ATNR D LDPALLR GRLDRKIE P
Sbjct: 278 FDSEVSGDREVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFP 337
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNE+AR AH + IH+ + +++++ + + S+ FNGA L+ VC EAG+ A+R
Sbjct: 338 LPNEEAR-AHI--LQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALRRGG 394
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
+ DF++ +V KK
Sbjct: 395 TELIHNDFVEGCVEVMAKKK 414
Score = 279 (103.3 bits), Expect = 9.4e-69, Sum P(2) = 9.4e-69
Identities = 75/210 (35%), Positives = 116/210 (55%)
Query: 40 ELTKQYDKSENDLKALQS--VGQHDLLLHCVREQLKELTK--QYDKSENDLKA--LQSVG 93
E+ ++ EN+ K L+S + +H L + +++++KE Q + L A ++ +
Sbjct: 33 EVNRKAKLLENETKVLRSEHISKH-LEMDSIQKRIKENNDKLQVNTQLPHLVANVVEIID 91
Query: 94 QV-SLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPRE 152
V T SKC V+VKA+ + +D KL+ G V ++ + I+ LP E
Sbjct: 92 MVLDGETQPSKC--VVVKASTRQTIFLAYPGIVDVDKLRPGDLVGINKDSYIILDTLPPE 149
Query: 153 VDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYG 212
D V M ++ YS IGGL +QI+EL E + LP+ + E F+ +GI PPKG L+YG
Sbjct: 150 YDSRVKAMEIDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYG 209
Query: 213 PPGTGKTLLARAVASQLDANFLKVVSSLFV 242
PPGTGKTLLARA A+Q ++ +LK+ V
Sbjct: 210 PPGTGKTLLARACAAQTNSTYLKLAGPQLV 239
Score = 46 (21.3 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 19/84 (22%), Positives = 35/84 (41%)
Query: 419 LRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYV 478
L N A + I S + V+ + + + S++ + EAG+ A+R +
Sbjct: 338 LPNEEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALRRGGTEL 397
Query: 479 TQEDFMKAVRKVSDNKKLESKLDY 502
DF++ +V KK L+Y
Sbjct: 398 IHNDFVEGCVEVMAKKK--KTLEY 419
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 519 (187.8 bits), Expect = 8.2e-50, P = 8.2e-50
Identities = 104/200 (52%), Positives = 139/200 (69%)
Query: 485 KAVRKVSDNKKLESKLD-YKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARA 543
K SD L+ +++ I LP+ + F+ +GI PKG L+YGPPGTGKTLLARA
Sbjct: 175 KPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARA 234
Query: 544 VASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEG 603
A+Q +A FLK+ + +V YIGE A+L+R+ F A+ P IIF+DE+DAIG +RF
Sbjct: 235 CAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSE 294
Query: 604 TSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE 663
S DRE+QRT++ELLNQ+DGF S +VK++ ATNR D LDPALLR GRLDRKIE PLP+E
Sbjct: 295 KSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSE 354
Query: 664 QARLEILKIHAGPIAKHGEI 683
+R +IL+IH+ + +I
Sbjct: 355 DSRAQILQIHSRKMTTDDDI 374
Score = 443 (161.0 bits), Expect = 1.3e-68, Sum P(2) = 1.3e-68
Identities = 90/199 (45%), Positives = 128/199 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R T+ + +V YIGE A+L+R+ F A+ P IIF+DE+DAIG +R
Sbjct: 231 LARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKR 290
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F S DRE+QRT++ELLNQ+DGF S +VK++ ATNR D LDPALLR GRLDRKIE P
Sbjct: 291 FDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFP 350
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LP+E +R A + IH+ + +I+++ + + +D FNGA L+ V EAG+ A+R+ +
Sbjct: 351 LPSEDSR-AQI--LQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQ 407
Query: 436 EYVTQEDFMKAVRKVSDNK 454
V EDF++ + +V K
Sbjct: 408 SSVKHEDFVEGISEVQARK 426
Score = 283 (104.7 bits), Expect = 1.3e-68, Sum P(2) = 1.3e-68
Identities = 83/247 (33%), Positives = 133/247 (53%)
Query: 2 TTPVVDEVRHKTLQDYRKKLTEHAEV-EGRLREMREQLKELTKQ----YDKSENDLKALQ 56
T P DE+ + L ++L A++ + +R R +L+ L+ + +K +++ + ++
Sbjct: 11 TLPGDDELDQEILNLSTQELQTRAKLLDNEIRIFRSELQRLSHENNVMLEKIKDNKEKIK 70
Query: 57 SVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQVSL-STSVSKCWTVIVKATNGP 115
+ Q L+ V E + ++ + DK EN Q G V+L +T+V K +VK ++
Sbjct: 71 NNRQLPYLVANVVEVM-DMNEIEDK-ENSESTTQG-GNVNLDNTAVGKA--AVVKTSSRQ 125
Query: 116 RYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGG 175
+ +D KLK V ++ + I+ LP E D V M ++ TYS +GG
Sbjct: 126 TVFLPMVGLVDPDKLKPNDLVGVNKDSYLILDTLPSEFDSRVKAMEVDEKPTETYSDVGG 185
Query: 176 LSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 235
L +QI EL E I LP+ + F+ +GI PKG L+YGPPGTGKTLLARA A+Q +A FLK
Sbjct: 186 LDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFLK 245
Query: 236 VVSSLFV 242
+ + V
Sbjct: 246 LAAPQLV 252
Score = 65 (27.9 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 424 TEAGLFAIRSEREYVTQEDF-MKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQED 482
+ A + I S R+ T +D + + + +D + EAG+ A+R+ + V ED
Sbjct: 356 SRAQILQIHS-RKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHED 414
Query: 483 FMKAVRKVSDNK 494
F++ + +V K
Sbjct: 415 FVEGISEVQARK 426
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 104/200 (52%), Positives = 141/200 (70%)
Query: 485 KAVRKVSDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARA 543
K +D LE ++ + I LP+ + E F+++G+ PPKG LLYGPPGTGKTL+ARA
Sbjct: 165 KPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARA 224
Query: 544 VASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEG 603
A+Q +A FLK+ +V +IG+ A+L+R+ F A+ PCIIF+DEIDAIG +RF
Sbjct: 225 CAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSE 284
Query: 604 TSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE 663
S DRE+QRT++ELLNQ+DGF S ++K+I ATNR D LDPAL+R GRLDRKIE P P E
Sbjct: 285 VSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTE 344
Query: 664 QARLEILKIHAGPIAKHGEI 683
+AR IL+IH+ + H ++
Sbjct: 345 EARARILQIHSRKMNVHPDV 364
Score = 461 (167.3 bits), Expect = 1.9e-68, Sum P(2) = 1.9e-68
Identities = 90/189 (47%), Positives = 126/189 (66%)
Query: 267 TYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI 326
T+ +V +IG+ A+L+R+ F A+ PCIIF+DEIDAIG +RF S DRE+
Sbjct: 232 TFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREV 291
Query: 327 QRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHT 386
QRT++ELLNQ+DGF S ++K+I ATNR D LDPAL+R GRLDRKIE P P E+AR A
Sbjct: 292 QRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR-ARI 350
Query: 387 WPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKA 446
+ IH+ + H ++++E + + +D FNGA L+ VC EAG+ A+R + V EDF +
Sbjct: 351 --LQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEG 408
Query: 447 VRKVSDNKK 455
+ +V KK
Sbjct: 409 IIQVQAKKK 417
Score = 262 (97.3 bits), Expect = 1.9e-68, Sum P(2) = 1.9e-68
Identities = 76/248 (30%), Positives = 121/248 (48%)
Query: 1 MTTPVVDEVRHKTLQDYRKKLTEHAE-----VEGRLREMREQLKELTKQYDKSENDLKAL 55
M TP+V++ TE ++ +R ++E + + D + +K
Sbjct: 1 MATPMVEDTSSFEEDQLASMSTEDITRATRLLDNEIRILKEDAQRTNLECDSYKEKIKEN 60
Query: 56 QSVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQVSL-STSVSKCWTVIVKATNG 114
Q + + L + + E+ + E+D A + + L S KC V++K +
Sbjct: 61 QEKIKLNKQLPYLVGNIVEILEM--NPEDD--AEEDGANIDLDSQRKGKC--VVLKTSTR 114
Query: 115 PRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIG 174
+ +D LK G V ++ + I+ LP E D V M ++ Y+ IG
Sbjct: 115 QTIFLPVVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIG 174
Query: 175 GLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFL 234
GL +QI+EL E I LP+ + E F+++G+ PPKG LLYGPPGTGKTL+ARA A+Q +A FL
Sbjct: 175 GLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFL 234
Query: 235 KVVSSLFV 242
K+ V
Sbjct: 235 KLAGPQLV 242
Score = 61 (26.5 bits), Expect = 8.9e-22, Sum P(2) = 8.9e-22
Identities = 19/77 (24%), Positives = 36/77 (46%)
Query: 426 AGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
A + I S + V + + + + +D+ + EAG+ A+R + V EDF +
Sbjct: 348 ARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 407
Query: 486 AVRKVSDNKKLESKLDY 502
+ +V KK + L+Y
Sbjct: 408 GIIQVQAKKK--ASLNY 422
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 521 (188.5 bits), Expect = 1.2e-52, Sum P(2) = 1.2e-52
Identities = 98/161 (60%), Positives = 123/161 (76%)
Query: 499 KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 558
K + + +ELPL +L++++GI PP+G LLYGPPGTGKT+L +AVA+ ANF++VV S
Sbjct: 143 KQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGS 202
Query: 559 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 618
V KY+GE R++R++F AR + P IIF+DEIDAI +RF T ADRE+QR L+ELL
Sbjct: 203 EFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGADREVQRILIELL 262
Query: 619 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 659
QMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE P
Sbjct: 263 TQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFP 303
Score = 396 (144.5 bits), Expect = 2.2e-68, Sum P(2) = 2.2e-68
Identities = 86/175 (49%), Positives = 111/175 (63%)
Query: 274 SAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMEL 333
S V KY+GE R++R++F AR + P IIF+DEIDAI +RF T ADRE+QR L+EL
Sbjct: 202 SEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGADREVQRILIEL 261
Query: 334 LNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE--QARLAHTWPISI 391
L QMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE P + Q RL +I
Sbjct: 262 LTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQ---TI 318
Query: 392 HAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKA 446
A + E+D + + D+ +GA + + +AGL A+R R + Q D +A
Sbjct: 319 TAKMLLSP-EVDLDTFIMRPDASSGAQIAAIMQDAGLLAVRKSRGVILQSDIEEA 372
Score = 331 (121.6 bits), Expect = 2.2e-68, Sum P(2) = 2.2e-68
Identities = 75/196 (38%), Positives = 117/196 (59%)
Query: 50 NDLKALQ-SVGQHDLLLHCVREQLKELTKQYDKSENDLKALQSVGQV--SLSTSVSKCWT 106
N KAL+ + DL ++E K L ++ +++ ++K +QSV V ++ + T
Sbjct: 11 NRWKALERQLEMLDLQEGFIKEDCKSLKRELIRAQEEVKRIQSVPLVIGQFLEAIDQN-T 69
Query: 107 VIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG 166
IV +T G YVV LD+ LK VAL + ++ LP E D + + ++
Sbjct: 70 AIVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEADSSISMLRPDERP 129
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
D++Y+ +GGL Q +E+RE +ELPL +L++++GI PP+G LLYGPPGTGKT+L +AVA
Sbjct: 130 DVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVA 189
Query: 227 SQLDANFLKVVSSLFV 242
+ ANF++VV S FV
Sbjct: 190 NSTAANFIRVVGSEFV 205
Score = 51 (23.0 bits), Expect = 8.4e-32, Sum P(2) = 8.4e-32
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 465 EAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYK 503
+AGL A+R R + Q D +A + +E YK
Sbjct: 351 DAGLLAVRKSRGVILQSDIEEAYARAVKPTDMEQFAFYK 389
Score = 42 (19.8 bits), Expect = 1.2e-52, Sum P(2) = 1.2e-52
Identities = 7/25 (28%), Positives = 17/25 (68%)
Query: 34 MREQLKELTKQYDKSENDLKALQSV 58
++E K L ++ +++ ++K +QSV
Sbjct: 30 IKEDCKSLKRELIRAQEEVKRIQSV 54
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 520 (188.1 bits), Expect = 6.3e-50, P = 6.3e-50
Identities = 102/191 (53%), Positives = 136/191 (71%)
Query: 485 KAVRKVSDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARA 543
+ + SD L+ ++ + I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA
Sbjct: 168 RPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 227
Query: 544 VASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEG 603
A+Q A FLK+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +RF
Sbjct: 228 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSE 287
Query: 604 TSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE 663
+ DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDRKIE P+PNE
Sbjct: 288 KAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNE 347
Query: 664 QARLEILKIHA 674
+AR I++IH+
Sbjct: 348 EARARIMQIHS 358
Score = 440 (159.9 bits), Expect = 3.7e-68, Sum P(2) = 3.7e-68
Identities = 89/200 (44%), Positives = 127/200 (63%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R + T+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +R
Sbjct: 224 LARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKR 283
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F + DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDRKIE P
Sbjct: 284 FDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFP 343
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
+PNE+AR A + IH+ + ++++E + + +D FNGA + VC EAG+ A+R
Sbjct: 344 MPNEEAR-ARI--MQIHSRKMNVCPDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGA 400
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
+ ED+M+ + +V KK
Sbjct: 401 TELNHEDYMEGILEVQAKKK 420
Score = 282 (104.3 bits), Expect = 3.7e-68, Sum P(2) = 3.7e-68
Identities = 82/243 (33%), Positives = 122/243 (50%)
Query: 5 VVDEVRHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLL 64
V DEV ++ K TE E+ R R + ++K + + + ++L+A++ + +
Sbjct: 9 VWDEVEDGIGEEVLKMSTE--EIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENTE 66
Query: 65 LHCVREQLKELTKQY----DKSENDLKALQSVGQVSL-STSVSKCWTVIVKATNGPRYVV 119
V + L L D ND + + + L S KC ++K + Y +
Sbjct: 67 KIKVNKTLPYLVSNVIELLDVDPNDQE--EDGANIDLDSQRKGKC--AVIKTSTRQTYFL 122
Query: 120 GCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQ 179
+D KLK G V ++ + I+ LP E D V M ++ YS IGGL +Q
Sbjct: 123 PVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQ 182
Query: 180 IRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 239
I+EL E I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FLK+
Sbjct: 183 IQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGP 242
Query: 240 LFV 242
V
Sbjct: 243 QLV 245
Score = 70 (29.7 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 19/77 (24%), Positives = 36/77 (46%)
Query: 426 AGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
A + I S + V + + + + +D+ C + EAG+ A+R + ED+M+
Sbjct: 351 ARIMQIHSRKMNVCPDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYME 410
Query: 486 AVRKVSDNKKLESKLDY 502
+ +V KK + L Y
Sbjct: 411 GILEVQAKKK--ANLQY 425
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 102/191 (53%), Positives = 136/191 (71%)
Query: 485 KAVRKVSDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARA 543
+ + SD L+ ++ + I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA
Sbjct: 138 RPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 197
Query: 544 VASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEG 603
A+Q A FLK+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +RF
Sbjct: 198 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSE 257
Query: 604 TSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE 663
+ DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDRKIE P+PNE
Sbjct: 258 KAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNE 317
Query: 664 QARLEILKIHA 674
+AR I++IH+
Sbjct: 318 EARARIMQIHS 328
Score = 452 (164.2 bits), Expect = 3.7e-68, Sum P(2) = 3.7e-68
Identities = 91/200 (45%), Positives = 128/200 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R + T+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +R
Sbjct: 194 LARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKR 253
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F + DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDRKIE P
Sbjct: 254 FDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFP 313
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
+PNE+AR A + IH+ + +++YE + + +D FNGA + VC EAG+ A+R
Sbjct: 314 MPNEEAR-ARI--MQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 370
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
+T ED+M+ + +V KK
Sbjct: 371 TELTHEDYMEGILEVQAKKK 390
Score = 269 (99.8 bits), Expect = 3.7e-68, Sum P(2) = 3.7e-68
Identities = 67/167 (40%), Positives = 90/167 (53%)
Query: 77 KQYDKSENDLKALQSVGQVSL-STSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTR 135
K D ND + + + L S KC ++K + Y + +D KLK G
Sbjct: 53 KLLDVDPNDQE--EDGANIDLDSQRKGKC--AVIKTSTRQTYFLPVIGLVDAEKLKPGDL 108
Query: 136 VALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPE 195
V ++ + I+ LP E D V M ++ YS IGGL +QI+EL E I LP+ + E
Sbjct: 109 VGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKE 168
Query: 196 LFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FLK+ V
Sbjct: 169 KFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLV 215
Score = 76 (31.8 bits), Expect = 9.7e-25, Sum P(2) = 9.7e-25
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 426 AGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
A + I S + V+ + + + + +D+ C + EAG+ A+R +T ED+M+
Sbjct: 321 ARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYME 380
Query: 486 AVRKVSDNKKLESKLDY 502
+ +V KK + L Y
Sbjct: 381 GILEVQAKKK--ANLQY 395
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 521 (188.5 bits), Expect = 3.9e-52, Sum P(2) = 3.9e-52
Identities = 102/191 (53%), Positives = 136/191 (71%)
Query: 485 KAVRKVSDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARA 543
+ + SD L+ ++ + I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA
Sbjct: 130 RPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 189
Query: 544 VASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEG 603
A+Q A FLK+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +RF
Sbjct: 190 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSE 249
Query: 604 TSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE 663
+ DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDRKIE P+PNE
Sbjct: 250 KAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNE 309
Query: 664 QARLEILKIHA 674
+AR I++IH+
Sbjct: 310 EARARIMQIHS 320
Score = 452 (164.2 bits), Expect = 7.7e-68, Sum P(2) = 7.7e-68
Identities = 91/200 (45%), Positives = 128/200 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R + T+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +R
Sbjct: 186 LARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKR 245
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F + DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDRKIE P
Sbjct: 246 FDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFP 305
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
+PNE+AR A + IH+ + +++YE + + +D FNGA + VC EAG+ A+R
Sbjct: 306 MPNEEAR-ARI--MQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 362
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
+T ED+M+ + +V KK
Sbjct: 363 TELTHEDYMEGILEVQAKKK 382
Score = 266 (98.7 bits), Expect = 7.7e-68, Sum P(2) = 7.7e-68
Identities = 60/134 (44%), Positives = 79/134 (58%)
Query: 109 VKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDI 168
++ TN Y + +D KLK G V ++ + I+ LP E D V M ++
Sbjct: 74 LELTNSQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTE 133
Query: 169 TYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQ 228
YS IGGL +QI+EL E I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q
Sbjct: 134 QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 193
Query: 229 LDANFLKVVSSLFV 242
A FLK+ V
Sbjct: 194 TKATFLKLAGPQLV 207
Score = 76 (31.8 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 426 AGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
A + I S + V+ + + + + +D+ C + EAG+ A+R +T ED+M+
Sbjct: 313 ARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYME 372
Query: 486 AVRKVSDNKKLESKLDY 502
+ +V KK + L Y
Sbjct: 373 GILEVQAKKK--ANLQY 387
Score = 37 (18.1 bits), Expect = 3.9e-52, Sum P(2) = 3.9e-52
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 251 LMGNQLKRRSTHH 263
L+ N ++ RS HH
Sbjct: 38 LVSNVIEERSVHH 50
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 521 (188.5 bits), Expect = 3.9e-52, Sum P(2) = 3.9e-52
Identities = 102/191 (53%), Positives = 136/191 (71%)
Query: 485 KAVRKVSDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARA 543
+ + SD L+ ++ + I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA
Sbjct: 126 RPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 185
Query: 544 VASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEG 603
A+Q A FLK+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +RF
Sbjct: 186 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSE 245
Query: 604 TSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE 663
+ DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDRKIE P+PNE
Sbjct: 246 KAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNE 305
Query: 664 QARLEILKIHA 674
+AR I++IH+
Sbjct: 306 EARARIMQIHS 316
Score = 452 (164.2 bits), Expect = 9.9e-68, Sum P(2) = 9.9e-68
Identities = 91/200 (45%), Positives = 128/200 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R + T+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +R
Sbjct: 182 LARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKR 241
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F + DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDRKIE P
Sbjct: 242 FDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFP 301
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
+PNE+AR A + IH+ + +++YE + + +D FNGA + VC EAG+ A+R
Sbjct: 302 MPNEEAR-ARI--MQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 358
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
+T ED+M+ + +V KK
Sbjct: 359 TELTHEDYMEGILEVQAKKK 378
Score = 265 (98.3 bits), Expect = 9.9e-68, Sum P(2) = 9.9e-68
Identities = 63/153 (41%), Positives = 86/153 (56%)
Query: 90 QSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYL 149
+ +G + +++C TV T Y + +D KLK G V ++ + I+ L
Sbjct: 55 EGIGSPLVIGDMARCQTVYDSET----YFLPVIGLVDAEKLKPGDLVGVNKDSYLILETL 110
Query: 150 PREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCL 209
P E D V M ++ YS IGGL +QI+EL E I LP+ + E F+ +GI PPKG L
Sbjct: 111 PTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVL 170
Query: 210 LYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
+YGPPGTGKTLLARA A+Q A FLK+ V
Sbjct: 171 MYGPPGTGKTLLARACAAQTKATFLKLAGPQLV 203
Score = 76 (31.8 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 426 AGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
A + I S + V+ + + + + +D+ C + EAG+ A+R +T ED+M+
Sbjct: 309 ARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYME 368
Query: 486 AVRKVSDNKKLESKLDY 502
+ +V KK + L Y
Sbjct: 369 GILEVQAKKK--ANLQY 383
Score = 37 (18.1 bits), Expect = 3.9e-52, Sum P(2) = 3.9e-52
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 251 LMGNQLKRRSTHH 263
L+ N ++ RS HH
Sbjct: 37 LVSNVIEERSVHH 49
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 97/161 (60%), Positives = 122/161 (75%)
Query: 499 KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 558
K + K +ELPL +L+ ++GI PP+G LLYGPPGTGKT+L +AVA+ A+F+++ S
Sbjct: 164 KQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRINGS 223
Query: 559 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 618
V KY+GE R++R++F AR + P IIF+DEIDAI +RF T ADRE+QR L+ELL
Sbjct: 224 EFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELL 283
Query: 619 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 659
NQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE P
Sbjct: 284 NQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKIEFP 324
Score = 408 (148.7 bits), Expect = 1.6e-67, Sum P(2) = 1.6e-67
Identities = 89/191 (46%), Positives = 118/191 (61%)
Query: 274 SAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMEL 333
S V KY+GE R++R++F AR + P IIF+DEIDAI +RF T ADRE+QR L+EL
Sbjct: 223 SEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLEL 282
Query: 334 LNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHA 393
LNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE P + R S A
Sbjct: 283 LNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKIEFPSLKD--RRERRLIFSTIA 340
Query: 394 GPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKA-VRKVSD 452
++ E D ++++ +D +GA + + EAGL A+R R + Q D +A +V
Sbjct: 341 SKMSLAPEADLDSLIIRNDPLSGAVIAAIMQEAGLRAVRKNRYMILQSDLEEAYTSQVKT 400
Query: 453 NKKLDHCNSYR 463
+ D + Y+
Sbjct: 401 GTEHDKFDFYK 411
Score = 310 (114.2 bits), Expect = 1.6e-67, Sum P(2) = 1.6e-67
Identities = 70/196 (35%), Positives = 117/196 (59%)
Query: 52 LKALQSVGQHDLLL---HCVREQLKELTKQYDKSENDLKALQSVGQV--SLSTSVSKCWT 106
LK L+ + DLLL ++++ + L ++ +++ ++K ++SV V + + T
Sbjct: 34 LKKLEK--ELDLLLLQEEYIKDEQRHLKRELVRAQEEVKRIKSVPLVIGQFLEPIDEN-T 90
Query: 107 VIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG 166
IV +T G YVV LD+ LK+ + VAL + ++ LP E D + + +
Sbjct: 91 GIVSSTTGSNYVVRILSTLDRELLKASSSVALHRHSNALVDILPPEADSSISIVGEDQKP 150
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
D+TY+ +GGL Q +E++E +ELPL +L+ ++GI PP+G LLYGPPGTGKT+L +AVA
Sbjct: 151 DVTYADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVA 210
Query: 227 SQLDANFLKVVSSLFV 242
+ A+F+++ S FV
Sbjct: 211 NSTTASFIRINGSEFV 226
Score = 47 (21.6 bits), Expect = 4.2e-29, Sum P(2) = 4.2e-29
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 465 EAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDY 502
EAGL A+R R + Q D +A K D+
Sbjct: 372 EAGLRAVRKNRYMILQSDLEEAYTSQVKTGTEHDKFDF 409
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 97/161 (60%), Positives = 122/161 (75%)
Query: 499 KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 558
K + K +ELPL +L+ ++GI PP+G LLYGPPGTGKT+L +AVA+ A+F+++ S
Sbjct: 164 KQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRINGS 223
Query: 559 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 618
V KY+GE R++R++F AR + P IIF+DEIDAI +RF T ADRE+QR L+ELL
Sbjct: 224 EFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELL 283
Query: 619 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 659
NQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE P
Sbjct: 284 NQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKIEFP 324
Score = 408 (148.7 bits), Expect = 1.6e-67, Sum P(2) = 1.6e-67
Identities = 89/191 (46%), Positives = 118/191 (61%)
Query: 274 SAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMEL 333
S V KY+GE R++R++F AR + P IIF+DEIDAI +RF T ADRE+QR L+EL
Sbjct: 223 SEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLEL 282
Query: 334 LNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHA 393
LNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE P + R S A
Sbjct: 283 LNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKIEFPSLKD--RRERRLIFSTIA 340
Query: 394 GPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKA-VRKVSD 452
++ E D ++++ +D +GA + + EAGL A+R R + Q D +A +V
Sbjct: 341 SKMSLAPEADLDSLIIRNDPLSGAVIAAIMQEAGLRAVRKNRYMILQSDLEEAYTSQVKT 400
Query: 453 NKKLDHCNSYR 463
+ D + Y+
Sbjct: 401 GTEHDKFDFYK 411
Score = 310 (114.2 bits), Expect = 1.6e-67, Sum P(2) = 1.6e-67
Identities = 70/196 (35%), Positives = 117/196 (59%)
Query: 52 LKALQSVGQHDLLL---HCVREQLKELTKQYDKSENDLKALQSVGQV--SLSTSVSKCWT 106
LK L+ + DLLL ++++ + L ++ +++ ++K ++SV V + + T
Sbjct: 34 LKKLEK--ELDLLLLQEEYIKDEQRHLKRELVRAQEEVKRIKSVPLVIGQFLEPIDEN-T 90
Query: 107 VIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG 166
IV +T G YVV LD+ LK+ + VAL + ++ LP E D + + +
Sbjct: 91 GIVSSTTGSNYVVRILSTLDRELLKASSSVALHRHSNALVDILPPEADSSISIVGEDQKP 150
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
D+TY+ +GGL Q +E++E +ELPL +L+ ++GI PP+G LLYGPPGTGKT+L +AVA
Sbjct: 151 DVTYADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVA 210
Query: 227 SQLDANFLKVVSSLFV 242
+ A+F+++ S FV
Sbjct: 211 NSTTASFIRINGSEFV 226
Score = 47 (21.6 bits), Expect = 4.2e-29, Sum P(2) = 4.2e-29
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 465 EAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDY 502
EAGL A+R R + Q D +A K D+
Sbjct: 372 EAGLRAVRKNRYMILQSDLEEAYTSQVKTGTEHDKFDF 409
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 512 (185.3 bits), Expect = 5.7e-49, P = 5.7e-49
Identities = 100/191 (52%), Positives = 135/191 (70%)
Query: 485 KAVRKVSDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARA 543
+ + SD L+ ++ + I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA
Sbjct: 175 RPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 234
Query: 544 VASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEG 603
A+Q A FLK+ +V +IG+ A+L+R+ F A+ P IIF+DE+DA G +RF
Sbjct: 235 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDATGTKRFDSE 294
Query: 604 TSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE 663
+ DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLD+KIE P+PNE
Sbjct: 295 KAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDQKIEFPMPNE 354
Query: 664 QARLEILKIHA 674
+AR I++IH+
Sbjct: 355 EARARIMQIHS 365
Score = 441 (160.3 bits), Expect = 2.0e-67, Sum P(2) = 2.0e-67
Identities = 89/200 (44%), Positives = 126/200 (63%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R + T+ +V +IG+ A+L+R+ F A+ P IIF+DE+DA G +R
Sbjct: 231 LARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDATGTKR 290
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F + DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLD+KIE P
Sbjct: 291 FDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDQKIEFP 350
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
+PNE+AR A + IH+ + +++YE + + D FNGA + VC EAG+ A+R
Sbjct: 351 MPNEEAR-ARI--MQIHSRKMNVSPDVNYEELARCMDDFNGAQCKAVCVEAGMIALRRGT 407
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
+T ED+M+ + +V KK
Sbjct: 408 TELTHEDYMEGILEVQAKKK 427
Score = 274 (101.5 bits), Expect = 2.0e-67, Sum P(2) = 2.0e-67
Identities = 83/248 (33%), Positives = 124/248 (50%)
Query: 1 MTTPVVDEVRHKTL-QDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVG 59
M T V DE + ++ K TE E+ R R + ++K + + + ++L+A++
Sbjct: 12 MAT-VWDEAEQDGIGEEVLKMSTE--EIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKI 68
Query: 60 QHDLLLHCVREQLKELTKQY----DKSENDLKALQSVGQVSL-STSVSKCWTVIVKATNG 114
+ + V + L L D ND + + + L S KC ++K +
Sbjct: 69 KENSEKIKVNKTLPYLVSNVIELLDVHPNDQE--EDGANIDLDSQRKGKC--AVIKTSTR 124
Query: 115 PRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIG 174
Y + +D KLK G V ++ + I+ LP E D V M ++ YS IG
Sbjct: 125 QTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIG 184
Query: 175 GLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFL 234
GL +QI+EL E I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FL
Sbjct: 185 GLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFL 244
Query: 235 KVVSSLFV 242
K+ V
Sbjct: 245 KLAGPQLV 252
Score = 75 (31.5 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 30/127 (23%), Positives = 55/127 (43%)
Query: 377 PNEQAR-LAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
PN Q + +A T + I + + G +D K+ + R A + I S +
Sbjct: 317 PNTQVKVIAATNRVDILDPALLRSGRLDQ----KIEFPMPNEEAR-----ARIMQIHSRK 367
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 495
V+ + + + + D+ C + EAG+ A+R +T ED+M+ + +V KK
Sbjct: 368 MNVSPDVNYEELARCMDDFNGAQCKAVCVEAGMIALRRGTTELTHEDYMEGILEVQAKKK 427
Query: 496 LESKLDY 502
+ L Y
Sbjct: 428 --ANLQY 432
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 403 (146.9 bits), Expect = 2.3e-67, Sum P(3) = 2.3e-67
Identities = 79/163 (48%), Positives = 111/163 (68%)
Query: 509 PLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGES 568
P+ NPE F+ +G+T P G LL GPPG GKTLLA+AVA++ NF+ V +++ Y+GES
Sbjct: 600 PVRNPEQFKALGLTTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 659
Query: 569 ARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLG 628
R +R++F ARN PC+IF DE+DA+ RR + A R + +LL +MDG ++
Sbjct: 660 ERAVRQVFQRARNSAPCVIFFDEVDALCPRRSDRESGAS---VRVVNQLLTEMDGLENRQ 716
Query: 629 QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
QV ++ ATNRPD +DPA+LRPGRLD+ + + LP + RL ILK
Sbjct: 717 QVFIMAATNRPDIIDPAILRPGRLDKTLYVGLPPPEDRLAILK 759
Score = 361 (132.1 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 72/160 (45%), Positives = 109/160 (68%)
Query: 512 NPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARL 571
+PE++ +G+ PP+G LL+GPPG GKTLLA+A+A +L+ LKV ++ +V GES +
Sbjct: 281 HPEVYLHLGVVPPRGFLLHGPPGCGKTLLAQAIAGELELPMLKVAATEMVSGVSGESEQK 340
Query: 572 IREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVK 631
+RE+F+ A + PC++F+DEIDAI +R +R I L+ L+ ++ + QV
Sbjct: 341 LRELFDQAVLNAPCVLFIDEIDAITPKREVASKDMERRIVAQLLTCLDDLNNVAATAQVL 400
Query: 632 MIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
+I ATNRPD+LDPAL R GR DR+I + +P+E AR +IL+
Sbjct: 401 VIGATNRPDSLDPALRRAGRFDREICLGIPDEAAREKILQ 440
Score = 286 (105.7 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 63/161 (39%), Positives = 96/161 (59%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
+++ Y+GES R +R++F ARN PC+IF DE+DA+ RR + A R + +LL
Sbjct: 651 LLNMYVGESERAVRQVFQRARNSAPCVIFFDEVDALCPRRSDRESGAS---VRVVNQLLT 707
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAG- 394
+MDG ++ QV ++ ATNRPD +DPA+LRPGRLD+ + + LP + RLA I+
Sbjct: 708 EMDGLENRQQVFIMAATNRPDIIDPAILRPGRLDKTLYVGLPPPEDRLAILKTITKDGTR 767
Query: 395 -PIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE 434
P+ ++ A + D + GADL + EA + A+R E
Sbjct: 768 PPLDTDVNLEEIAYSQQCDCYTGADLSALVREASICALRQE 808
Score = 241 (89.9 bits), Expect = 2.3e-67, Sum P(3) = 2.3e-67
Identities = 58/168 (34%), Positives = 91/168 (54%)
Query: 264 LEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSAD 323
LE ++ +V GES + +RE+F+ A + PC++F+DEIDAI +R +
Sbjct: 317 LELPMLKVAATEMVSGVSGESEQKLRELFDQAVLNAPCVLFIDEIDAITPKREVASKDME 376
Query: 324 REIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARL 383
R I L+ L+ ++ + QV +I ATNRPD+LDPAL R GR DR+I + +P+E AR
Sbjct: 377 RRIVAQLLTCLDDLNNVAATAQVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEAARE 436
Query: 384 AHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI 431
+ + G D+ + L+ + GADL +C EA + +
Sbjct: 437 KILQTL---CRKLKLPGSFDFLHLAHLTPGYVGADLMALCREAAMCTV 481
Score = 174 (66.3 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 35/70 (50%), Positives = 47/70 (67%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
D+T++ IG L + EL I P+ NPE F+ +G+T P G LL GPPG GKTLLA+AVA
Sbjct: 577 DVTWADIGALEDVREELTMAILAPVRNPEQFKALGLTTPAGVLLAGPPGCGKTLLAKAVA 636
Query: 227 SQLDANFLKV 236
++ NF+ V
Sbjct: 637 NESGLNFISV 646
Score = 163 (62.4 bits), Expect = 2.3e-67, Sum P(3) = 2.3e-67
Identities = 29/76 (38%), Positives = 54/76 (71%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+ + +GG E ++E+ +++ + + +PE++ +G+ PP+G LL+GPPG GKTLLA+A+A
Sbjct: 257 VKFEDVGGNDETLKEICKML-IHVRHPEVYLHLGVVPPRGFLLHGPPGCGKTLLAQAIAG 315
Query: 228 QLDANFLKVVSSLFVT 243
+L+ LKV ++ V+
Sbjct: 316 ELELPMLKVAATEMVS 331
Score = 37 (18.1 bits), Expect = 3.5e-54, Sum P(3) = 3.5e-54
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 245 KEDMAILMGNQLKRRSTH 262
KED+ L L +R+ H
Sbjct: 72 KEDLTALEAEHLAKRARH 89
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 102/180 (56%), Positives = 137/180 (76%)
Query: 496 LESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 554
LES++ + K +ELPL +PEL++ +GI PPKG +LYG PGTGKTLLA+AVA+Q A FL+
Sbjct: 196 LESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLR 255
Query: 555 VVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 614
VV S ++ KY+G+ RL+R++FN A H P I+F+DEIDAIG +R+ + A+REIQRT+
Sbjct: 256 VVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTM 315
Query: 615 MELLNQMDGFD-SLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
+ELLNQ+DGFD S +K+IMATNR LDPAL+RPGR+DRKI P+E + +I IH
Sbjct: 316 LELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIH 375
Score = 415 (151.1 bits), Expect = 6.4e-67, Sum P(2) = 6.4e-67
Identities = 83/200 (41%), Positives = 125/200 (62%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + T+ S ++ KY+G+ RL+R++FN A H P I+F+DEIDAIG +R
Sbjct: 241 LAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKR 300
Query: 316 FSEGTSADREIQRTLMELLNQMDGFD-SLGQVKMIMATNRPDTLDPALLRPGRLDRKIEI 374
+ + A+REIQRT++ELLNQ+DGFD S +K+IMATNR LDPAL+RPGR+DRKI
Sbjct: 301 YDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILF 360
Query: 375 PLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE 434
P+E + +IH + +++ E +++ D +GA+++ + +EAGL A+R
Sbjct: 361 ENPDEATKRKI---FTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRER 417
Query: 435 REYVTQEDFMKAVRKVSDNK 454
R V +DF +A KV K
Sbjct: 418 RMRVVMDDFRQAREKVLKTK 437
Score = 297 (109.6 bits), Expect = 6.4e-67, Sum P(2) = 6.4e-67
Identities = 60/131 (45%), Positives = 85/131 (64%)
Query: 109 VKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDI 168
+ +T GP Y V +DK L+ G V L ++I+ L + DP++ M +
Sbjct: 129 IVSTAGPEYYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINVMKLDKAPTE 188
Query: 169 TYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQ 228
+Y+ IGGL QI+E++E +ELPL +PEL++ +GI PPKG +LYG PGTGKTLLA+AVA+Q
Sbjct: 189 SYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQ 248
Query: 229 LDANFLKVVSS 239
A FL+VV S
Sbjct: 249 TSATFLRVVGS 259
Score = 68 (29.0 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 18/71 (25%), Positives = 35/71 (49%)
Query: 424 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDF 483
T+ +F I + + + ++ ++ + + D+ + +EAGL A+R R V +DF
Sbjct: 367 TKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDF 426
Query: 484 MKAVRKVSDNK 494
+A KV K
Sbjct: 427 RQAREKVLKTK 437
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 104/191 (54%), Positives = 137/191 (71%)
Query: 485 KAVRKVSDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARA 543
K +D LE ++ + I LP+ + E F+++GI PPKG LLYGPPGTGKTL+ARA
Sbjct: 164 KPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARA 223
Query: 544 VASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEG 603
A+Q +A FLK+ +V +IG+ A+L+R+ F A+ PCIIF+DEIDAIG +RF
Sbjct: 224 CAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSE 283
Query: 604 TSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE 663
S DRE+QRT++ELLNQ+DGF S ++K+I ATNR D LDPAL+R GRLDRKIE P P E
Sbjct: 284 VSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTE 343
Query: 664 QARLEILKIHA 674
+AR IL+IH+
Sbjct: 344 EARGRILQIHS 354
Score = 451 (163.8 bits), Expect = 7.0e-67, Sum P(2) = 7.0e-67
Identities = 88/189 (46%), Positives = 125/189 (66%)
Query: 267 TYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI 326
T+ +V +IG+ A+L+R+ F A+ PCIIF+DEIDAIG +RF S DRE+
Sbjct: 231 TFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREV 290
Query: 327 QRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHT 386
QRT++ELLNQ+DGF S ++K+I ATNR D LDPAL+R GRLDRKIE P P E+AR
Sbjct: 291 QRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRI- 349
Query: 387 WPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKA 446
+ IH+ + + ++++E + + +D FNGA L+ VC EAG+ A+R + V EDF +
Sbjct: 350 --LQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEG 407
Query: 447 VRKVSDNKK 455
+ +V KK
Sbjct: 408 IIQVQAKKK 416
Score = 258 (95.9 bits), Expect = 7.0e-67, Sum P(2) = 7.0e-67
Identities = 77/212 (36%), Positives = 111/212 (52%)
Query: 50 NDLKALQSVGQH-DLLLHCVREQLKE------LTKQ--Y---------DKSENDLKALQS 91
N+++ L+ Q +L L V+E++KE L KQ Y + S D A +
Sbjct: 33 NEIRILKEESQRTNLDLESVKEKIKENQEKIKLNKQLPYLVGNIVEILEMSPED-DAEED 91
Query: 92 VGQVSL-STSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLP 150
+ L S KC V++K + + +D LK G V ++ + I+ LP
Sbjct: 92 GANIDLDSQRKGKC--VVLKTSTRQTIFLPVVGLVDPDTLKPGDLVGVNKDSYLILDTLP 149
Query: 151 REVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLL 210
E D V M ++ Y+ IGGL +QI+EL E I LP+ + E F+++GI PPKG LL
Sbjct: 150 SEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLL 209
Query: 211 YGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
YGPPGTGKTL+ARA A+Q +A FLK+ V
Sbjct: 210 YGPPGTGKTLMARACAAQTNATFLKLAGPQLV 241
Score = 61 (26.5 bits), Expect = 2.8e-21, Sum P(2) = 2.8e-21
Identities = 18/75 (24%), Positives = 35/75 (46%)
Query: 428 LFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAV 487
+ I S + V + + + + +D+ + EAG+ A+R + V EDF + +
Sbjct: 349 ILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI 408
Query: 488 RKVSDNKKLESKLDY 502
+V KK + L+Y
Sbjct: 409 IQVQAKKK--ASLNY 421
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 502 (181.8 bits), Expect = 8.5e-48, P = 8.5e-48
Identities = 93/161 (57%), Positives = 122/161 (75%)
Query: 499 KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 558
K + + +ELPL+ +L++++GI PP+G LLYGPPGTGKT+L +AVA+ A F++V S
Sbjct: 181 KQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGS 240
Query: 559 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 618
V KY+GE R++R++F AR + P IIF+DE+D+I +RF T +DRE+QR L+ELL
Sbjct: 241 EFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGSDREVQRILIELL 300
Query: 619 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 659
QMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE P
Sbjct: 301 TQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFP 341
Score = 395 (144.1 bits), Expect = 2.2e-66, Sum P(2) = 2.2e-66
Identities = 87/192 (45%), Positives = 121/192 (63%)
Query: 274 SAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMEL 333
S V KY+GE R++R++F AR + P IIF+DE+D+I +RF T +DRE+QR L+EL
Sbjct: 240 SEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGSDREVQRILIEL 299
Query: 334 LNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP-LPNEQARLAHTWPISIH 392
L QMDGFD VK+IMATNR DTLDPALLRPGRLDRKIE P L + + R I
Sbjct: 300 LTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFGTI--- 356
Query: 393 AGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKA-VRKVS 451
A ++ E D ++++ +DS +GA + + EAGL A+R R + Q D +A +V
Sbjct: 357 ASKMSLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDLEEAYATQVK 416
Query: 452 DNKKLDHCNSYR 463
+ +D + Y+
Sbjct: 417 TDNTVDKFDFYK 428
Score = 313 (115.2 bits), Expect = 2.2e-66, Sum P(2) = 2.2e-66
Identities = 83/249 (33%), Positives = 135/249 (54%)
Query: 1 MTTPVVDEVRHK-TLQDYRKKLTEHAEVEGRLREMREQLKELTKQ-YDKSENDLKALQSV 58
+ TPV V K ++ Y L A++ G + L + Y K LK L+
Sbjct: 6 IVTPVEKAVEEKPAVKSYASLL---AQLNGTVNN-NSALSNVNSDIYFK----LKKLEK- 56
Query: 59 GQHDLLL---HCVREQLKELTKQYDKSENDLKALQSVGQV--SLSTSVSKCWTVIVKATN 113
+++LL ++++ + L ++ +++ ++K +QSV V + + T IV +T
Sbjct: 57 -EYELLTLQEDYIKDEQRHLKRELKRAQEEVKRIQSVPLVIGQFLEPIDQN-TGIVSSTT 114
Query: 114 GPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAI 173
G YVV LD+ LK VAL + ++ LP + D + M + D+TY+ +
Sbjct: 115 GMSYVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPDVTYADV 174
Query: 174 GGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANF 233
GGL Q +E+RE +ELPL+ +L++++GI PP+G LLYGPPGTGKT+L +AVA+ A F
Sbjct: 175 GGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAF 234
Query: 234 LKVVSSLFV 242
++V S FV
Sbjct: 235 IRVNGSEFV 243
Score = 48 (22.0 bits), Expect = 1.4e-28, Sum P(2) = 1.4e-28
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 465 EAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDY 502
EAGL A+R R + Q D +A K D+
Sbjct: 389 EAGLRAVRKNRYVILQSDLEEAYATQVKTDNTVDKFDF 426
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 501 (181.4 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 93/169 (55%), Positives = 125/169 (73%)
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
+ LP+ + + F +GI PPKG L+YGPPGTGKT++ARAVA+Q + FLK+ +V +I
Sbjct: 193 VVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFI 252
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 625
G+ A+L+R+ F A+ P IIF+DE+DAIG +RF + DRE+QRT++ELLNQ+DGF
Sbjct: 253 GDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 312
Query: 626 SLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+K+I ATNR D LDPALLR GRLDRKIE+P PNE AR I++IH+
Sbjct: 313 PNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARARIMQIHS 361
Score = 444 (161.4 bits), Expect = 3.5e-66, Sum P(2) = 3.5e-66
Identities = 87/191 (45%), Positives = 125/191 (65%)
Query: 265 EKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADR 324
+ T+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +RF + DR
Sbjct: 236 KSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 295
Query: 325 EIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLA 384
E+QRT++ELLNQ+DGF +K+I ATNR D LDPALLR GRLDRKIE+P PNE AR A
Sbjct: 296 EVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDAR-A 354
Query: 385 HTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFM 444
+ IH+ + + ++++E + + +D FNGA + VC EAG+ A+R + + EDFM
Sbjct: 355 RI--MQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATEILHEDFM 412
Query: 445 KAVRKVSDNKK 455
A+ +V KK
Sbjct: 413 DAILEVQAKKK 423
Score = 259 (96.2 bits), Expect = 3.5e-66, Sum P(2) = 3.5e-66
Identities = 70/237 (29%), Positives = 118/237 (49%)
Query: 7 DEVRHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKA-LQSVGQHDLLL 65
+E+ + +D + + H ++ +R MR +++ + + +K + + + L
Sbjct: 24 EEILKMSTEDLKSRT--HL-LDNEIRIMRSEVQRINHSATTLKERIKENTERIKVNKTLP 80
Query: 66 HCVREQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRRQL 125
+ V + EL D +E + V L +KC ++K + Y + +
Sbjct: 81 YLV-SNVVELLDLEDNTEEE------GANVDLDAQKTKC--AVIKTSTRATYFLPVVGLV 131
Query: 126 DKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELRE 185
D +LK G V ++ + I+ LP E D V M ++ YS IGG +QI+EL E
Sbjct: 132 DPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIE 191
Query: 186 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
+ LP+ + + F +GI PPKG L+YGPPGTGKT++ARAVA+Q + FLK+ V
Sbjct: 192 AVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLV 248
Score = 85 (35.0 bits), Expect = 7.6e-24, Sum P(2) = 7.6e-24
Identities = 22/82 (26%), Positives = 40/82 (48%)
Query: 421 NVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQ 480
N A + I S + V ++ + + + +D+ C + EAG+ A+R + +
Sbjct: 349 NEDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATEILH 408
Query: 481 EDFMKAVRKVSDNKKLESKLDY 502
EDFM A+ +V KK + L+Y
Sbjct: 409 EDFMDAILEVQAKKK--ASLNY 428
Score = 37 (18.1 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 213 PPGTGKTLLARAVASQLDANFLKV 236
PP GK A V +D LK+
Sbjct: 6 PPKDGKNPEAMEVEDAIDEEILKM 29
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 501 (181.4 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 93/169 (55%), Positives = 125/169 (73%)
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
+ LP+ + + F +GI PPKG L+YGPPGTGKT++ARAVA+Q + FLK+ +V +I
Sbjct: 193 VVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFI 252
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 625
G+ A+L+R+ F A+ P IIF+DE+DAIG +RF + DRE+QRT++ELLNQ+DGF
Sbjct: 253 GDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 312
Query: 626 SLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+K+I ATNR D LDPALLR GRLDRKIE+P PNE AR I++IH+
Sbjct: 313 PNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARARIMQIHS 361
Score = 444 (161.4 bits), Expect = 3.5e-66, Sum P(2) = 3.5e-66
Identities = 87/191 (45%), Positives = 125/191 (65%)
Query: 265 EKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADR 324
+ T+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +RF + DR
Sbjct: 236 KSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 295
Query: 325 EIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLA 384
E+QRT++ELLNQ+DGF +K+I ATNR D LDPALLR GRLDRKIE+P PNE AR A
Sbjct: 296 EVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDAR-A 354
Query: 385 HTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFM 444
+ IH+ + + ++++E + + +D FNGA + VC EAG+ A+R + + EDFM
Sbjct: 355 RI--MQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATEILHEDFM 412
Query: 445 KAVRKVSDNKK 455
A+ +V KK
Sbjct: 413 DAILEVQAKKK 423
Score = 259 (96.2 bits), Expect = 3.5e-66, Sum P(2) = 3.5e-66
Identities = 70/237 (29%), Positives = 118/237 (49%)
Query: 7 DEVRHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKA-LQSVGQHDLLL 65
+E+ + +D + + H ++ +R MR +++ + + +K + + + L
Sbjct: 24 EEILKMSTEDLKSRT--HL-LDNEIRIMRSEVQRINHSATTLKERIKENTERIKVNKTLP 80
Query: 66 HCVREQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRRQL 125
+ V + EL D +E + V L +KC ++K + Y + +
Sbjct: 81 YLV-SNVVELLDLEDNTEEE------GANVDLDAQKTKC--AVIKTSTRATYFLPVVGLV 131
Query: 126 DKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELRE 185
D +LK G V ++ + I+ LP E D V M ++ YS IGG +QI+EL E
Sbjct: 132 DPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIE 191
Query: 186 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
+ LP+ + + F +GI PPKG L+YGPPGTGKT++ARAVA+Q + FLK+ V
Sbjct: 192 AVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLV 248
Score = 85 (35.0 bits), Expect = 7.6e-24, Sum P(2) = 7.6e-24
Identities = 22/82 (26%), Positives = 40/82 (48%)
Query: 421 NVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQ 480
N A + I S + V ++ + + + +D+ C + EAG+ A+R + +
Sbjct: 349 NEDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATEILH 408
Query: 481 EDFMKAVRKVSDNKKLESKLDY 502
EDFM A+ +V KK + L+Y
Sbjct: 409 EDFMDAILEVQAKKK--ASLNY 428
Score = 37 (18.1 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 213 PPGTGKTLLARAVASQLDANFLKV 236
PP GK A V +D LK+
Sbjct: 6 PPKDGKNPEAMEVEDAIDEEILKM 29
>FB|FBgn0028684 [details] [associations]
symbol:Rpt5 "Regulatory particle triple-A ATPase 5"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 HSSP:Q01853 TIGRFAMs:TIGR01242 GO:GO:0008540
ChiTaRS:PSMC3 FlyBase:FBgn0028684 EMBL:AF134402
ProteinModelPortal:Q9XZC3 STRING:Q9XZC3 PRIDE:Q9XZC3
InParanoid:Q9XZC3 ArrayExpress:Q9XZC3 Bgee:Q9XZC3 Uniprot:Q9XZC3
Length = 431
Score = 495 (179.3 bits), Expect = 4.8e-50, Sum P(2) = 4.8e-50
Identities = 97/191 (50%), Positives = 134/191 (70%)
Query: 485 KAVRKVSDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARA 543
+ + SD L+ ++ + + LP+ + E F+ +GI PPKG +LYGPPGTGKTLLARA
Sbjct: 173 RPTEQFSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVILYGPPGTGKTLLARA 232
Query: 544 VASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEG 603
A+Q + FLK+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +RF
Sbjct: 233 CAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSE 292
Query: 604 TSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE 663
+ DRE+QRT++ELLNQ++GF S +K+I ATNR D L PALLR GRLDRKIE P PNE
Sbjct: 293 KAGDREVQRTMLELLNQLNGFSSTADIKVIAATNRVDIL-PALLRSGRLDRKIEFPHPNE 351
Query: 664 QARLEILKIHA 674
+AR I++IH+
Sbjct: 352 EARARIMQIHS 362
Score = 440 (159.9 bits), Expect = 7.7e-66, Sum P(2) = 7.7e-66
Identities = 92/207 (44%), Positives = 129/207 (62%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R + T+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +R
Sbjct: 229 LARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR 288
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F + DRE+QRT++ELLNQ++GF S +K+I ATNR D L PALLR GRLDRKIE P
Sbjct: 289 FDSEKAGDREVQRTMLELLNQLNGFSSTADIKVIAATNRVDIL-PALLRSGRLDRKIEFP 347
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
PNE+AR A + IH+ + ++++E + + +D FNGA + VC EAG+ A+R
Sbjct: 348 HPNEEAR-ARI--MQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSA 404
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSY 462
VT EDFM A+ +V KK + N Y
Sbjct: 405 NSVTHEDFMDAIMEVQAKKKAN-LNYY 430
Score = 260 (96.6 bits), Expect = 7.7e-66, Sum P(2) = 7.7e-66
Identities = 77/246 (31%), Positives = 125/246 (50%)
Query: 12 KTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQS-VGQHDLLLHCVRE 70
+TL+D K + E E + MR E+ + +N++K ++S V + + E
Sbjct: 7 QTLED--KSIWEDGEESLGEKVMRMSTDEIVSRTRLMDNEIKIMKSEVIRITHEIQAQNE 64
Query: 71 QLKELTKQY--DKS-----ENDLKAL-------QSVGQVSLSTSVSKCWTVIVKATNGPR 116
++K+ T++ +K+ N ++ L + G V++ + K ++K +
Sbjct: 65 KIKDNTEKIKVNKTLPYLVSNVIELLDVDPQEEEDDGSVTVLDNQRKGKCAVIKTSTRQA 124
Query: 117 YVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGL 176
Y + +D KLK G ++ I+ LP E D V M ++ +S IGGL
Sbjct: 125 YFLPVIGLVDAEKLKPGDLAGVNKDFYLILETLPAEYDARVKAMEVDERPTEQFSDIGGL 184
Query: 177 SEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
+QI+EL E + LP+ + E F+ +GI PPKG +LYGPPGTGKTLLARA A+Q + FLK+
Sbjct: 185 DKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVILYGPPGTGKTLLARACAAQTKSTFLKL 244
Query: 237 VSSLFV 242
V
Sbjct: 245 AGPQLV 250
Score = 90 (36.7 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 23/77 (29%), Positives = 39/77 (50%)
Query: 426 AGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
A + I S + V+ + + + + +D+ C + EAG+ A+R VT EDFM
Sbjct: 355 ARIMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSANSVTHEDFMD 414
Query: 486 AVRKVSDNKKLESKLDY 502
A+ +V KK + L+Y
Sbjct: 415 AIMEVQAKKK--ANLNY 429
Score = 49 (22.3 bits), Expect = 4.8e-50, Sum P(2) = 4.8e-50
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 325 EIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLA 384
++ +TL + DG +SLG+ M M+T D + R +D +I+I + +E R+
Sbjct: 4 DMAQTLEDKSIWEDGEESLGEKVMRMST------DEIVSRTRLMDNEIKI-MKSEVIRIT 56
Query: 385 H 385
H
Sbjct: 57 H 57
>MGI|MGI:1914709 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914709
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
CTD:4931 HOVERGEN:HBG001226 OMA:NDMTLKE OrthoDB:EOG4ZPDTN
EMBL:AK004676 EMBL:AK054502 EMBL:AK140509 EMBL:BC031847
IPI:IPI00321884 RefSeq:NP_080447.1 UniGene:Mm.263464 PDB:2RRE
PDBsum:2RRE ProteinModelPortal:Q9DBY8 SMR:Q9DBY8 STRING:Q9DBY8
PhosphoSite:Q9DBY8 PaxDb:Q9DBY8 PRIDE:Q9DBY8
Ensembl:ENSMUST00000027797 GeneID:67459 KEGG:mmu:67459
UCSC:uc007dxb.1 GeneTree:ENSGT00570000079239 InParanoid:Q9DBY8
EvolutionaryTrace:Q9DBY8 NextBio:324638 Bgee:Q9DBY8 CleanEx:MM_NVL
Genevestigator:Q9DBY8 GermOnline:ENSMUSG00000026516 Uniprot:Q9DBY8
Length = 855
Score = 388 (141.6 bits), Expect = 2.1e-65, Sum P(4) = 2.1e-65
Identities = 76/163 (46%), Positives = 109/163 (66%)
Query: 509 PLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGES 568
P+ NP+ F+ +G+ P G LL GPPG GKTLLA+AVA++ NF+ V +++ Y+GES
Sbjct: 599 PVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 658
Query: 569 ARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLG 628
R +R++F A+N PC+IF DE+DA+ RR T A R + +LL +MDG ++
Sbjct: 659 ERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGAS---VRVVNQLLTEMDGLETRQ 715
Query: 629 QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
QV ++ ATNRPD +DPA+LRPGRLD+ + + LP R+ ILK
Sbjct: 716 QVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILK 758
Score = 372 (136.0 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 79/163 (48%), Positives = 113/163 (69%)
Query: 512 NPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARL 571
+PE++Q +G+ PP+G LL+GPPG GKTLLA A+A +LD LKV + IV GES +
Sbjct: 285 HPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQK 344
Query: 572 IREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLG--- 628
+RE+F+ A ++ PCI+F+DEIDAI +R E S D E +R + +LL MD +++
Sbjct: 345 LRELFDQAVSNAPCIVFIDEIDAITPKR--EVASKDME-RRIVAQLLTCMDDLNNVAATA 401
Query: 629 QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
+V +I ATNRPD+LDPAL R GR DR++ + +P+E AR IL+
Sbjct: 402 RVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQ 444
Score = 280 (103.6 bits), Expect = 9.8e-33, Sum P(3) = 9.8e-33
Identities = 61/161 (37%), Positives = 95/161 (59%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
+++ Y+GES R +R++F A+N PC+IF DE+DA+ RR T A R + +LL
Sbjct: 650 LLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGAS---VRVVNQLLT 706
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
+MDG ++ QV ++ ATNRPD +DPA+LRPGRLD+ + + LP R+A I+ +
Sbjct: 707 EMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTK 766
Query: 396 IAKHGEIDYEAVVK--LSDSFNGADLRNVCTEAGLFAIRSE 434
+++ E + + + GADL + EA L A+R E
Sbjct: 767 PPLDEDVNLETIANDLRCNCYTGADLTALVREASLCALRQE 807
Score = 234 (87.4 bits), Expect = 2.1e-65, Sum P(4) = 2.1e-65
Identities = 61/159 (38%), Positives = 93/159 (58%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
IV GES + +RE+F+ A ++ PCI+F+DEIDAI +R E S D E +R + +LL
Sbjct: 333 IVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAITPKR--EVASKDME-RRIVAQLLT 389
Query: 336 QMDGFDSLG---QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIH 392
MD +++ +V +I ATNRPD+LDPAL R GR DR++ + +P+E AR +
Sbjct: 390 CMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQTL--- 446
Query: 393 AGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI 431
+ ++ + L+ F GADL +C EA + A+
Sbjct: 447 CRKLRLPETFNFCHLAHLTPGFVGADLMALCREAAMCAV 485
Score = 167 (63.8 bits), Expect = 2.1e-65, Sum P(4) = 2.1e-65
Identities = 30/77 (38%), Positives = 53/77 (68%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++ + +GG ++E+ +++ + + +PE++Q +G+ PP+G LL+GPPG GKTLLA A+A
Sbjct: 260 NVKFEDVGGNDATLKEVCKML-IHMRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIA 318
Query: 227 SQLDANFLKVVSSLFVT 243
+LD LKV + V+
Sbjct: 319 GELDLPILKVAAPEIVS 335
Score = 158 (60.7 bits), Expect = 8.4e-32, Sum P(3) = 8.4e-32
Identities = 38/86 (44%), Positives = 51/86 (59%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIR-ELREVIELPLLNPELFQRVGITPPKGCLL 210
EV P ++T++ IG L E IR EL I P+ NP+ F+ +G+ P G LL
Sbjct: 561 EVQPSAKREGFVTVPNVTWADIGAL-EDIRDELIMAILAPVRNPDQFRTLGLGTPAGILL 619
Query: 211 YGPPGTGKTLLARAVASQLDANFLKV 236
GPPG GKTLLA+AVA++ NF+ V
Sbjct: 620 AGPPGCGKTLLAKAVANESGLNFISV 645
Score = 41 (19.5 bits), Expect = 2.1e-65, Sum P(4) = 2.1e-65
Identities = 9/40 (22%), Positives = 21/40 (52%)
Query: 48 SENDLKALQSVGQHDLLLHCVREQLKELTKQYDKSENDLK 87
SE +LK L+ + L +++ E T+ Y +++++
Sbjct: 68 SEKELKNLKELEDGHLAKRARQDEEDEYTESYSDDDSNME 107
>RGD|1311270 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0016235 "aggresome"
evidence=IEA;ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1311270 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 KO:K14571 EMBL:CH473985 CTD:4931 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN GeneTree:ENSGT00570000079239 IPI:IPI00371541
RefSeq:NP_001099450.1 UniGene:Rn.8896 Ensembl:ENSRNOT00000004927
GeneID:289323 KEGG:rno:289323 UCSC:RGD:1311270 NextBio:629627
Uniprot:D3ZTY9
Length = 855
Score = 393 (143.4 bits), Expect = 2.4e-65, Sum P(3) = 2.4e-65
Identities = 77/163 (47%), Positives = 109/163 (66%)
Query: 509 PLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGES 568
P+ NPE F+ +G+ P G LL GPPG GKTLLA+AVA++ NF+ V +++ Y+GES
Sbjct: 599 PVRNPEQFRALGLVAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 658
Query: 569 ARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLG 628
R +R++F A+N PC+IF DE+DA+ RR T A R + +LL +MDG ++
Sbjct: 659 ERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGAS---VRVVNQLLTEMDGLETRQ 715
Query: 629 QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
QV ++ ATNRPD +DPA+LRPGRLD+ + + LP R+ ILK
Sbjct: 716 QVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILK 758
Score = 365 (133.5 bits), Expect = 4.1e-30, P = 4.1e-30
Identities = 76/163 (46%), Positives = 113/163 (69%)
Query: 512 NPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARL 571
+PE++Q +G+ PP+G LL+GPPG GKTLLA A+A +LD LKV + IV GES +
Sbjct: 285 HPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQK 344
Query: 572 IREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLG--- 628
+R++F+ A ++ PCI+F+DEIDAI +R E S D E +R + +LL MD +++
Sbjct: 345 LRDLFDQAVSNAPCIVFIDEIDAITPKR--EVASKDME-RRIVAQLLTCMDDLNNVAATA 401
Query: 629 QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
+V ++ ATNRPD+LDPAL R GR DR++ + +P+E +R IL+
Sbjct: 402 RVLVVGATNRPDSLDPALRRAGRFDREVCLGIPDEASRERILQ 444
Score = 295 (108.9 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 69/204 (33%), Positives = 113/204 (55%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
+++ Y+GES R +R++F A+N PC+IF DE+DA+ RR T A R + +LL
Sbjct: 650 LLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGAS---VRVVNQLLT 706
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
+MDG ++ QV ++ ATNRPD +DPA+LRPGRLD+ + + LP R+A I+ +
Sbjct: 707 EMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTK 766
Query: 396 IAKHGEIDYEAVVK--LSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDN 453
++D EA+ D + GADL + EA L A+R +E Q++ + +
Sbjct: 767 PPLDEDVDLEAIANDHRCDCYTGADLSALVREASLCALR--QEITGQKNGIGTAELTVSH 824
Query: 454 KKLDHCNSYRTEAGLFAIRSEREY 477
K + ++R +++ +R Y
Sbjct: 825 KHFEE--AFRKVKPSISVKDQRMY 846
Score = 230 (86.0 bits), Expect = 2.4e-65, Sum P(3) = 2.4e-65
Identities = 58/159 (36%), Positives = 93/159 (58%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
IV GES + +R++F+ A ++ PCI+F+DEIDAI +R E S D E +R + +LL
Sbjct: 333 IVSGVSGESEQKLRDLFDQAVSNAPCIVFIDEIDAITPKR--EVASKDME-RRIVAQLLT 389
Query: 336 QMDGFDSLG---QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIH 392
MD +++ +V ++ ATNRPD+LDPAL R GR DR++ + +P+E +R +
Sbjct: 390 CMDDLNNVAATARVLVVGATNRPDSLDPALRRAGRFDREVCLGIPDEASRERILQTL--- 446
Query: 393 AGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI 431
+ ++ + L+ F GADL +C EA + A+
Sbjct: 447 CRKLRLPETFNFSHLAHLTPGFVGADLMALCREAAVCAV 485
Score = 166 (63.5 bits), Expect = 2.4e-65, Sum P(3) = 2.4e-65
Identities = 30/76 (39%), Positives = 52/76 (68%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+ + +GG ++E+ +++ + + +PE++Q +G+ PP+G LL+GPPG GKTLLA A+A
Sbjct: 261 VKFEDVGGNDATLKEVCKML-IHMRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAG 319
Query: 228 QLDANFLKVVSSLFVT 243
+LD LKV + V+
Sbjct: 320 ELDLPILKVAAPEIVS 335
Score = 164 (62.8 bits), Expect = 1.8e-34, Sum P(2) = 1.8e-34
Identities = 35/85 (41%), Positives = 49/85 (57%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
EV P ++T++ +G L + EL I P+ NPE F+ +G+ P G LL
Sbjct: 561 EVQPSAKREGFVTVPNVTWADVGALEDIREELTMAILAPVRNPEQFRALGLVAPAGVLLA 620
Query: 212 GPPGTGKTLLARAVASQLDANFLKV 236
GPPG GKTLLA+AVA++ NF+ V
Sbjct: 621 GPPGCGKTLLAKAVANESGLNFISV 645
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 104/194 (53%), Positives = 137/194 (70%)
Query: 485 KAVRKVSDNKKLESKL----DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLL 540
K +++V + + L S L I LP+ + E F+ +GI PPKG L+YGPPGTGKTLL
Sbjct: 194 KQIQEVREARHLTSLLCLSASLVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 253
Query: 541 ARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRF 600
ARA A+Q A FLK+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +RF
Sbjct: 254 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRF 313
Query: 601 SEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPL 660
+ DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDRKIE P+
Sbjct: 314 DSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 373
Query: 661 PNEQARLEILKIHA 674
PNE+AR I++IH+
Sbjct: 374 PNEEARARIMQIHS 387
Score = 452 (164.2 bits), Expect = 6.9e-65, Sum P(2) = 6.9e-65
Identities = 91/200 (45%), Positives = 128/200 (64%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R + T+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +R
Sbjct: 253 LARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKR 312
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F + DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDRKIE P
Sbjct: 313 FDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFP 372
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
+PNE+AR A + IH+ + +++YE + + +D FNGA + VC EAG+ A+R
Sbjct: 373 MPNEEAR-ARI--MQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 429
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
+T ED+M+ + +V KK
Sbjct: 430 TELTHEDYMEGILEVQAKKK 449
Score = 238 (88.8 bits), Expect = 6.9e-65, Sum P(2) = 6.9e-65
Identities = 74/255 (29%), Positives = 123/255 (48%)
Query: 7 DEVRHKTLQDYRKKLTEHAEV-EGRLREMREQLKELTKQYDKSENDLKA-LQSVGQHDLL 64
D + + L+ +++ + + + ++ M+ ++ +T + ++ +K + + + L
Sbjct: 28 DGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTL 87
Query: 65 LHCVREQLKELTKQYDKSENDLKALQSVGQVSL-STSVSKCWTVIVKATNGPRYVVGCRR 123
+ V ++ L D ND + + + L S KC ++K + Y +
Sbjct: 88 PYLVSNVIELL----DVDPNDQE--EDGANIDLDSQRKGKC--AVIKTSTRQTYFLPVIG 139
Query: 124 QLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIREL 183
+D KLK G V ++ + I+ LP E D V M ++ YS IGGL +QI+E+
Sbjct: 140 LVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQEV 199
Query: 184 REV----------------IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
RE I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+
Sbjct: 200 REARHLTSLLCLSASLVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAA 259
Query: 228 QLDANFLKVVSSLFV 242
Q A FLK+ V
Sbjct: 260 QTKATFLKLAGPQLV 274
Score = 76 (31.8 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 426 AGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
A + I S + V+ + + + + +D+ C + EAG+ A+R +T ED+M+
Sbjct: 380 ARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYME 439
Query: 486 AVRKVSDNKKLESKLDY 502
+ +V KK + L Y
Sbjct: 440 GILEVQAKKK--ANLQY 454
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 102/182 (56%), Positives = 136/182 (74%)
Query: 493 NKKLESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANF 552
+K++E ++ + LP+ + F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A F
Sbjct: 206 DKQIEELIE---AVVLPMKQADKFKNLGIKPPKGALMYGPPGTGKTLLARACAAQSGATF 262
Query: 553 LKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQR 612
LK+ + +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +RF S DRE+QR
Sbjct: 263 LKLAAPQLVQMFIGDGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSDKSGDREVQR 322
Query: 613 TLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKI 672
T++ELLNQ+DGF S +VK++ ATNR DTLDPALLR GRLDRKIE PLP+E+AR +LKI
Sbjct: 323 TMLELLNQLDGFGSDDRVKVLAATNRVDTLDPALLRSGRLDRKIEFPLPSEEARESVLKI 382
Query: 673 HA 674
HA
Sbjct: 383 HA 384
Score = 442 (160.7 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 87/189 (46%), Positives = 128/189 (67%)
Query: 267 TYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI 326
T+ + +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +RF S DRE+
Sbjct: 261 TFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSDKSGDREV 320
Query: 327 QRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHT 386
QRT++ELLNQ+DGF S +VK++ ATNR DTLDPALLR GRLDRKIE PLP+E+AR +
Sbjct: 321 QRTMLELLNQLDGFGSDDRVKVLAATNRVDTLDPALLRSGRLDRKIEFPLPSEEARES-- 378
Query: 387 WPISIHAGPI-AKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMK 445
+ IHA + + +++ + + +D FNGA L+ V EAG+ A+R+ + + EDF++
Sbjct: 379 -VLKIHARKLHCDNNSVNWRELARSTDEFNGAQLKAVTVEAGMIALRNGKSIIKHEDFVE 437
Query: 446 AVRKVSDNK 454
A+ +V K
Sbjct: 438 AISEVQARK 446
Score = 247 (92.0 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 52/118 (44%), Positives = 72/118 (61%)
Query: 125 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELR 184
+D +KLK + ++ + ++ LP E D V M ++ YS IGGL +QI EL
Sbjct: 154 VDPSKLKPNDLIGVNKDSYLVLDTLPSEYDSRVKAMEVDEKPTEDYSDIGGLDKQIEELI 213
Query: 185 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
E + LP+ + F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FLK+ + V
Sbjct: 214 EAVVLPMKQADKFKNLGIKPPKGALMYGPPGTGKTLLARACAAQSGATFLKLAAPQLV 271
Score = 63 (27.2 bits), Expect = 6.8e-20, Sum P(2) = 6.8e-20
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 465 EAGLFAIRSEREYVTQEDFMKAVRKVSDNK 494
EAG+ A+R+ + + EDF++A+ +V K
Sbjct: 417 EAGMIALRNGKSIIKHEDFVEAISEVQARK 446
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 515 (186.3 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 100/191 (52%), Positives = 136/191 (71%)
Query: 485 KAVRKVSDNKKLESKLD-YKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARA 543
K K +D L+ +++ I P+ E F+++GI PKG L+YGPPGTGKTLLARA
Sbjct: 205 KPTEKYTDIGGLDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGALMYGPPGTGKTLLARA 264
Query: 544 VASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEG 603
A++ +A FLK+ +V +IG+ A+L+R+ F A+ P IIF+DE+DA+G +RF
Sbjct: 265 CAAETNATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELDAVGTKRFDSE 324
Query: 604 TSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE 663
S DRE+QRT++ELLNQ+DGF S ++K++ ATNR D LDPALLR GRLDRKIE PLPNE
Sbjct: 325 KSGDREVQRTMLELLNQLDGFASDDRIKVLAATNRVDVLDPALLRSGRLDRKIEFPLPNE 384
Query: 664 QARLEILKIHA 674
+AR IL+IH+
Sbjct: 385 EARANILQIHS 395
Score = 435 (158.2 bits), Expect = 1.2e-64, Sum P(2) = 1.2e-64
Identities = 86/200 (43%), Positives = 126/200 (63%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R T+ +V +IG+ A+L+R+ F A+ P IIF+DE+DA+G +R
Sbjct: 261 LARACAAETNATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELDAVGTKR 320
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F S DRE+QRT++ELLNQ+DGF S ++K++ ATNR D LDPALLR GRLDRKIE P
Sbjct: 321 FDSEKSGDREVQRTMLELLNQLDGFASDDRIKVLAATNRVDVLDPALLRSGRLDRKIEFP 380
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LPNE+AR A+ + IH+ + +++ + + +D F GA L+ VC EAG+ A+R
Sbjct: 381 LPNEEAR-ANI--LQIHSRKMTVEDSVNWAELARSTDEFGGAQLKAVCVEAGMIALRKGH 437
Query: 436 EYVTQEDFMKAVRKVSDNKK 455
+ E+++ A+ +V KK
Sbjct: 438 SKIGHENYVDAIAEVQAKKK 457
Score = 254 (94.5 bits), Expect = 1.2e-64, Sum P(2) = 1.2e-64
Identities = 76/239 (31%), Positives = 122/239 (51%)
Query: 7 DEVRHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLH 66
+E+ + + D K+ +E LR M+ + + LT + + + +K Q +++ L
Sbjct: 55 EEILNSSTADIIKR---RRMLENELRIMKSEYQRLTHEQNTMKEKVKDNQEKIENNRQLP 111
Query: 67 CVREQLKELTKQYDKSENDLKALQSVGQVSL-STSVSKCWTVIVKATNGPRYV--VGCRR 123
+ + EL ++E A + + L +T V K VI +T Y+ +G
Sbjct: 112 YLVGNVVELLDLDVEAE----AAEEGANIDLDATRVGKS-AVIKTSTRQTIYLPLIGL-- 164
Query: 124 QLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIREL 183
+D KLK G + ++ + I+ LP E D V M ++ Y+ IGGL +QI E+
Sbjct: 165 -VDHEKLKPGDLIGVNKDSYLILDTLPAEYDNRVKAMEVDEKPTEKYTDIGGLDKQIEEI 223
Query: 184 REVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
E I P+ E F+++GI PKG L+YGPPGTGKTLLARA A++ +A FLK+ V
Sbjct: 224 VEAIVWPMKEAERFKKLGIKAPKGALMYGPPGTGKTLLARACAAETNATFLKLAGPQLV 282
Score = 53 (23.7 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 465 EAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 495
EAG+ A+R + E+++ A+ +V KK
Sbjct: 427 EAGMIALRKGHSKIGHENYVDAIAEVQAKKK 457
>ASPGD|ASPL0000062283 [details] [associations]
symbol:AN1366 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 HOGENOM:HOG000223225 GO:GO:0017111 OMA:REGFTTI
EnsemblFungi:CADANIAT00001245 Uniprot:C8VRW3
Length = 729
Score = 386 (140.9 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 79/164 (48%), Positives = 112/164 (68%)
Query: 509 PLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGES 568
P+ +PEL+ VGIT P G LL+GPPG GKTLLA+AVA++ ANF+ V +++KY+GES
Sbjct: 488 PIKHPELYASVGITAPTGVLLWGPPGCGKTLLAKAVANESRANFISVKGPELLNKYVGES 547
Query: 569 ARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLG 628
R +R++F AR+ PC+IF DE+DA+ RR + A + TL L ++DG S
Sbjct: 548 ERAVRQVFVRARSSIPCVIFFDELDALVPRRDDTLSEASARVVNTL---LTELDGLGSSR 604
Query: 629 Q-VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
Q + +I ATNRPD +DPA+LRPGRL+ + + LP+ R+EIL+
Sbjct: 605 QGIYVIAATNRPDIIDPAMLRPGRLETLLFVNLPSPLERVEILQ 648
Score = 319 (117.4 bits), Expect = 3.2e-25, P = 3.2e-25
Identities = 69/171 (40%), Positives = 109/171 (63%)
Query: 505 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKY 564
++ LP+ P+++ + PP+G LL+GPPG GKT++A A A++L F+ + + +IV
Sbjct: 180 LVILPMTRPQVYLASNVQPPRGVLLHGPPGCGKTMIANAFAAELGVPFISISAPSIVSGM 239
Query: 565 IGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 624
GES + +RE F A+ PC+IF+DEIDAI +R E + + E +R + +LL MD
Sbjct: 240 SGESEKALREHFEEAKRLAPCLIFIDEIDAITPKR--ENSQREME-KRIVAQLLTCMDDL 296
Query: 625 ---DSLGQ-VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
+ G+ V ++ ATNRPD+LD AL R GR D++I + +P+E R +IL+
Sbjct: 297 ALEKTDGKPVIVLAATNRPDSLDAALRRGGRFDKEINMTVPSEPVREQILR 347
Score = 275 (101.9 bits), Expect = 3.5e-33, Sum P(3) = 3.5e-33
Identities = 71/189 (37%), Positives = 110/189 (58%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
+++KY+GES R +R++F AR+ PC+IF DE+DA+ RR + A + TL L
Sbjct: 539 LLNKYVGESERAVRQVFVRARSSIPCVIFFDELDALVPRRDDTLSEASARVVNTL---LT 595
Query: 336 QMDGFDSLGQ-VKMIMATNRPDTLDPALLRPGRLDRK--IEIPLPNEQARLAHTWPISIH 392
++DG S Q + +I ATNRPD +DPA+LRPGRL+ + +P P E+ + T +
Sbjct: 596 ELDGLGSSRQGIYVIAATNRPDIIDPAMLRPGRLETLLFVNLPSPLERVEILQTL---VR 652
Query: 393 AGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKA---VR- 448
PI + E D + + + F+GADL ++ AG AI+ R+ + +DF+ A +R
Sbjct: 653 RLPI-EFNE-DLRRLAEECEGFSGADLTSLLRRAGYNAIK-RRDTIKFDDFVAAKSFIRP 709
Query: 449 KVSDNKKLD 457
V+D KK D
Sbjct: 710 SVTDMKKYD 718
Score = 231 (86.4 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 77/239 (32%), Positives = 122/239 (51%)
Query: 270 PFYS-SA--IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI 326
PF S SA IV GES + +RE F A+ PC+IF+DEIDAI +R E + + E
Sbjct: 226 PFISISAPSIVSGMSGESEKALREHFEEAKRLAPCLIFIDEIDAITPKR--ENSQREME- 282
Query: 327 QRTLMELLNQMDGF---DSLGQ-VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQAR 382
+R + +LL MD + G+ V ++ ATNRPD+LD AL R GR D++I + +P+E R
Sbjct: 283 KRIVAQLLTCMDDLALEKTDGKPVIVLAATNRPDSLDAALRRGGRFDKEINMTVPSEPVR 342
Query: 383 LAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQED 442
++ + ++D++ + K + F GADL ++ + AG AI+ + +
Sbjct: 343 EQILRALTRKMRLV---DDLDFKTLAKRTPGFVGADLNDLVSTAGSTAIKRYLDLLKSNS 399
Query: 443 FMKAVRKVSDN--KKLDHCNSYRTEAGLFAIRSEREYV--TQEDFMKAVRKVSDNKKLE 497
+ + D+ + T A I SE E V + +DF A+ K+ + K E
Sbjct: 400 GEEMDIEGQDDLSPSVKELRRLITHAKETPIGSEAEVVLVSNDDFFTALPKIQPSSKRE 458
Score = 176 (67.0 bits), Expect = 3.5e-33, Sum P(3) = 3.5e-33
Identities = 38/70 (54%), Positives = 48/70 (68%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
D T++ IG LS EL I P+ +PEL+ VGIT P G LL+GPPG GKTLLA+AVA
Sbjct: 465 DTTWADIGALSGIRDELATAIVDPIKHPELYASVGITAPTGVLLWGPPGCGKTLLAKAVA 524
Query: 227 SQLDANFLKV 236
++ ANF+ V
Sbjct: 525 NESRANFISV 534
Score = 160 (61.4 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 26/79 (32%), Positives = 52/79 (65%)
Query: 165 PGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARA 224
P ++ + +GGL + +++L +++ LP+ P+++ + PP+G LL+GPPG GKT++A A
Sbjct: 159 PTHVSLADLGGLDDVVQQLGDLVILPMTRPQVYLASNVQPPRGVLLHGPPGCGKTMIANA 218
Query: 225 VASQLDANFLKVVSSLFVT 243
A++L F+ + + V+
Sbjct: 219 FAAELGVPFISISAPSIVS 237
Score = 38 (18.4 bits), Expect = 3.5e-33, Sum P(3) = 3.5e-33
Identities = 18/60 (30%), Positives = 25/60 (41%)
Query: 19 KKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQS--VGQHDLLLHCVREQLKELT 76
K L EH E RL + E+ K EN + ++ V Q LL C+ + E T
Sbjct: 245 KALREHFEEAKRLAPCLIFIDEIDAITPKRENSQREMEKRIVAQ---LLTCMDDLALEKT 301
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 389 (142.0 bits), Expect = 1.8e-64, Sum P(3) = 1.8e-64
Identities = 77/178 (43%), Positives = 113/178 (63%)
Query: 494 KKLESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFL 553
+K+ +L K + P+ PE+ +R+G+T P G LL GPPG GKTLLA+A+A++ NF+
Sbjct: 668 EKIREEL--KLAVLAPVKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAIANEAGINFI 725
Query: 554 KVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRT 613
V +++ Y+GES R +R F ARN PC+IF DE D++ +R S+G + R
Sbjct: 726 SVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDEFDSLCPKR-SDGGDGNNSGTRI 784
Query: 614 LMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
+ +LL +MDG + V ++ ATNRPD +DPA+LRPGRLD + + P + R EILK
Sbjct: 785 VNQLLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRLDTILYVGFPEQSERTEILK 842
Score = 342 (125.4 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 71/164 (43%), Positives = 107/164 (65%)
Query: 512 NPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARL 571
+PE + ++G+ P +G LL+GPPG GKT LARA++ QL +++ ++ ++ GES
Sbjct: 272 SPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISGQLKMPLMEIPATELIGGISGESEER 331
Query: 572 IREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF--DSLGQ 629
IRE+F+ A + PC++F+DEIDAIGG R + S D E +R + +L++ +D + GQ
Sbjct: 332 IREVFDQAIGYSPCVLFIDEIDAIGGNR--QWASKDME-RRIVSQLISSLDNLKANEFGQ 388
Query: 630 -VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKI 672
V +I AT RPD LDP L R GR D +I I +P+ + R EIL+I
Sbjct: 389 SVVVIAATTRPDVLDPGLRRIGRFDHEIAIHIPSRKERREILRI 432
Score = 269 (99.8 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 56/159 (35%), Positives = 92/159 (57%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
+++ Y+GES R +R F ARN PC+IF DE D++ +R S+G + R + +LL
Sbjct: 732 LMNMYVGESERAVRACFQRARNSAPCVIFFDEFDSLCPKR-SDGGDGNNSGTRIVNQLLT 790
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAG- 394
+MDG + V ++ ATNRPD +DPA+LRPGRLD + + P EQ+ + G
Sbjct: 791 EMDGVEERKGVYILAATNRPDIIDPAILRPGRLDTILYVGFP-EQSERTEILKATTKNGK 849
Query: 395 -PIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIR 432
P+ ++D + + ++ + GADL + +A +F++R
Sbjct: 850 RPVLAD-DVDLDEIAAQTEGYTGADLAGLVKQASMFSLR 887
Score = 250 (93.1 bits), Expect = 1.8e-64, Sum P(3) = 1.8e-64
Identities = 73/247 (29%), Positives = 124/247 (50%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R + L+ ++ ++ GES IRE+F+ A + PC++F+DEIDAIGG R
Sbjct: 300 LARAISGQLKMPLMEIPATELIGGISGESEERIREVFDQAIGYSPCVLFIDEIDAIGGNR 359
Query: 316 FSEGTSADREIQRTLMELLNQMDGF--DSLGQ-VKMIMATNRPDTLDPALLRPGRLDRKI 372
+ S D E +R + +L++ +D + GQ V +I AT RPD LDP L R GR D +I
Sbjct: 360 --QWASKDME-RRIVSQLISSLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEI 416
Query: 373 EIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIR 432
I +P+ + R + I ++ +++Y+ + +L+ + GADL + + A A++
Sbjct: 417 AIHIPSRKERREI---LRIQCEGLSVDPKLNYDKIAELTPGYVGADLMALVSRAASVAVK 473
Query: 433 SEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSD 492
R + A K LD + +AG + + T +D +A +KV
Sbjct: 474 -RRSMKKFRELHAASEKNMTTVTLDD-DEPSEDAGETPVPDSKGEETAKD-AEAEQKVDG 530
Query: 493 NKKLESK 499
+K+ +K
Sbjct: 531 DKETSAK 537
Score = 168 (64.2 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 35/71 (49%), Positives = 49/71 (69%)
Query: 167 DITYSAIGGLSEQIRE-LREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAV 225
D T+ IG L E+IRE L+ + P+ PE+ +R+G+T P G LL GPPG GKTLLA+A+
Sbjct: 658 DTTWDDIGAL-EKIREELKLAVLAPVKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAI 716
Query: 226 ASQLDANFLKV 236
A++ NF+ V
Sbjct: 717 ANEAGINFISV 727
Score = 145 (56.1 bits), Expect = 1.8e-64, Sum P(3) = 1.8e-64
Identities = 26/68 (38%), Positives = 47/68 (69%)
Query: 169 TYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQ 228
++ IGG+ ++EL E++ + + +PE + ++G+ P +G LL+GPPG GKT LARA++ Q
Sbjct: 249 SFRDIGGMDSTLKELCEML-IHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISGQ 307
Query: 229 LDANFLKV 236
L +++
Sbjct: 308 LKMPLMEI 315
>UNIPROTKB|E2QY79 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
Length = 851
Score = 387 (141.3 bits), Expect = 1.0e-63, Sum P(3) = 1.0e-63
Identities = 77/163 (47%), Positives = 109/163 (66%)
Query: 509 PLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGES 568
P+ +PE F+ +G+ P G LL GPPG GKTLLA+AVA++ NF+ V +++ Y+GES
Sbjct: 594 PVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 653
Query: 569 ARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLG 628
R +R++F AR+ PC+IF DE+DA+ RR T A R + +LL +MDG ++
Sbjct: 654 ERAVRQVFQRARSSAPCVIFFDEVDALCPRRSDRETGAS---VRVVNQLLTEMDGLEARQ 710
Query: 629 QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
QV ++ ATNRPD +DPA+LRPGRLD+ + + LP RL ILK
Sbjct: 711 QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILK 753
Score = 357 (130.7 bits), Expect = 3.1e-29, P = 3.1e-29
Identities = 76/163 (46%), Positives = 110/163 (67%)
Query: 512 NPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARL 571
+PE++ +G PP+G LL+GPPG GKTLLA A+A +LD LKV ++ +V GES +
Sbjct: 280 HPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVVSGVSGESEQK 339
Query: 572 IREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLG--- 628
+RE+F A ++ PC++F+DEIDAI +R E S D E +R + +LL MD ++
Sbjct: 340 LRELFEQAVSNAPCVLFIDEIDAITPKR--EVASKDME-RRIVAQLLTCMDDLNTTAATA 396
Query: 629 QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
+V +I ATNRPD+LDPAL R GR DR+I + +P+E +R IL+
Sbjct: 397 RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQ 439
Score = 286 (105.7 bits), Expect = 7.3e-33, Sum P(2) = 7.3e-33
Identities = 63/161 (39%), Positives = 97/161 (60%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
+++ Y+GES R +R++F AR+ PC+IF DE+DA+ RR T A R + +LL
Sbjct: 645 LLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDALCPRRSDRETGAS---VRVVNQLLT 701
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
+MDG ++ QV ++ ATNRPD +DPA+LRPGRLD+ + + LP RLA I+ +
Sbjct: 702 EMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTR 761
Query: 396 IAKHGEIDYEAVVK--LSDSFNGADLRNVCTEAGLFAIRSE 434
+++ EA+ D ++GADL + EA + A+R E
Sbjct: 762 PPLDADVNLEALAADLRCDCYSGADLSALVREASICALRQE 802
Score = 229 (85.7 bits), Expect = 1.0e-63, Sum P(3) = 1.0e-63
Identities = 59/162 (36%), Positives = 92/162 (56%)
Query: 273 SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLME 332
++ +V GES + +RE+F A ++ PC++F+DEIDAI +R E S D E +R + +
Sbjct: 325 ATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAITPKR--EVASKDME-RRIVAQ 381
Query: 333 LLNQMDGFDSLG---QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPI 389
LL MD ++ +V +I ATNRPD+LDPAL R GR DR+I + +P+E +R +
Sbjct: 382 LLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTL 441
Query: 390 SIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI 431
+ + + L+ F GADL +C EA + A+
Sbjct: 442 ---CRKLRLPETFPFRHLAHLTPGFVGADLMALCREAAMCAV 480
Score = 158 (60.7 bits), Expect = 1.0e-63, Sum P(3) = 1.0e-63
Identities = 29/76 (38%), Positives = 51/76 (67%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+ + +GG ++E+ +++ + + +PE++ +G PP+G LL+GPPG GKTLLA A+A
Sbjct: 256 VKFEDVGGNDATLKEVCKML-IHMRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAG 314
Query: 228 QLDANFLKVVSSLFVT 243
+LD LKV ++ V+
Sbjct: 315 ELDLPILKVAATEVVS 330
Score = 156 (60.0 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 32/69 (46%), Positives = 45/69 (65%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+T++ IG L + EL I P+ +PE F+ +G+ P G LL GPPG GKTLLA+AVA+
Sbjct: 572 VTWADIGALEDIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVAN 631
Query: 228 QLDANFLKV 236
+ NF+ V
Sbjct: 632 ESGLNFISV 640
>UNIPROTKB|J9P5D7 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
Length = 855
Score = 387 (141.3 bits), Expect = 1.1e-63, Sum P(3) = 1.1e-63
Identities = 77/163 (47%), Positives = 109/163 (66%)
Query: 509 PLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGES 568
P+ +PE F+ +G+ P G LL GPPG GKTLLA+AVA++ NF+ V +++ Y+GES
Sbjct: 599 PVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 658
Query: 569 ARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLG 628
R +R++F AR+ PC+IF DE+DA+ RR T A R + +LL +MDG ++
Sbjct: 659 ERAVRQVFQRARSSAPCVIFFDEVDALCPRRSDRETGAS---VRVVNQLLTEMDGLEARQ 715
Query: 629 QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
QV ++ ATNRPD +DPA+LRPGRLD+ + + LP RL ILK
Sbjct: 716 QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILK 758
Score = 357 (130.7 bits), Expect = 3.1e-29, P = 3.1e-29
Identities = 76/163 (46%), Positives = 110/163 (67%)
Query: 512 NPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARL 571
+PE++ +G PP+G LL+GPPG GKTLLA A+A +LD LKV ++ +V GES +
Sbjct: 280 HPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVVSGVSGESEQK 339
Query: 572 IREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLG--- 628
+RE+F A ++ PC++F+DEIDAI +R E S D E +R + +LL MD ++
Sbjct: 340 LRELFEQAVSNAPCVLFIDEIDAITPKR--EVASKDME-RRIVAQLLTCMDDLNTTAATA 396
Query: 629 QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
+V +I ATNRPD+LDPAL R GR DR+I + +P+E +R IL+
Sbjct: 397 RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQ 439
Score = 286 (105.7 bits), Expect = 7.4e-33, Sum P(2) = 7.4e-33
Identities = 63/161 (39%), Positives = 97/161 (60%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
+++ Y+GES R +R++F AR+ PC+IF DE+DA+ RR T A R + +LL
Sbjct: 650 LLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDALCPRRSDRETGAS---VRVVNQLLT 706
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
+MDG ++ QV ++ ATNRPD +DPA+LRPGRLD+ + + LP RLA I+ +
Sbjct: 707 EMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTR 766
Query: 396 IAKHGEIDYEAVVK--LSDSFNGADLRNVCTEAGLFAIRSE 434
+++ EA+ D ++GADL + EA + A+R E
Sbjct: 767 PPLDADVNLEALAADLRCDCYSGADLSALVREASICALRQE 807
Score = 229 (85.7 bits), Expect = 1.1e-63, Sum P(3) = 1.1e-63
Identities = 59/162 (36%), Positives = 92/162 (56%)
Query: 273 SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLME 332
++ +V GES + +RE+F A ++ PC++F+DEIDAI +R E S D E +R + +
Sbjct: 325 ATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAITPKR--EVASKDME-RRIVAQ 381
Query: 333 LLNQMDGFDSLG---QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPI 389
LL MD ++ +V +I ATNRPD+LDPAL R GR DR+I + +P+E +R +
Sbjct: 382 LLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTL 441
Query: 390 SIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI 431
+ + + L+ F GADL +C EA + A+
Sbjct: 442 ---CRKLRLPETFPFRHLAHLTPGFVGADLMALCREAAMCAV 480
Score = 158 (60.7 bits), Expect = 1.1e-63, Sum P(3) = 1.1e-63
Identities = 29/76 (38%), Positives = 51/76 (67%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+ + +GG ++E+ +++ + + +PE++ +G PP+G LL+GPPG GKTLLA A+A
Sbjct: 256 VKFEDVGGNDATLKEVCKML-IHMRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAG 314
Query: 228 QLDANFLKVVSSLFVT 243
+LD LKV ++ V+
Sbjct: 315 ELDLPILKVAATEVVS 330
Score = 156 (60.0 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 32/69 (46%), Positives = 45/69 (65%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+T++ IG L + EL I P+ +PE F+ +G+ P G LL GPPG GKTLLA+AVA+
Sbjct: 577 VTWADIGALEDIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVAN 636
Query: 228 QLDANFLKV 236
+ NF+ V
Sbjct: 637 ESGLNFISV 645
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 370 (135.3 bits), Expect = 2.1e-63, Sum P(3) = 2.1e-63
Identities = 80/187 (42%), Positives = 107/187 (57%)
Query: 497 ESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 556
E K +E P + + F+R+G PP G L++GPPG KTL+ARAVAS+ NFL V
Sbjct: 731 EVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVK 790
Query: 557 SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLME 616
+ K++GES + +R +F AR + P IIF DEID++ R E R + +
Sbjct: 791 GPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSLASIRGKENDGVSVS-DRVMSQ 849
Query: 617 LLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGP 676
LL ++DG V +I ATNRPD +D ALLRPGR DR + + PNE R ILKIH
Sbjct: 850 LLVELDGLHQRVGVTVIAATNRPDKIDSALLRPGRFDRLLYVGPPNETDREAILKIHLRK 909
Query: 677 IAKHGEI 683
I +I
Sbjct: 910 IPCSSDI 916
Score = 344 (126.2 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 72/154 (46%), Positives = 97/154 (62%)
Query: 519 VGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNY 578
+G+ P KG L++GPPGTGKT LAR A NF V I+ +Y+GES + + E+F
Sbjct: 413 LGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRS 472
Query: 579 ARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNR 638
A N P ++F+D++DAI R EG + QR + LLN MDG V +I ATNR
Sbjct: 473 ASNATPAVVFIDDLDAIAPAR-KEG--GEELSQRMVATLLNLMDGISRTDGVVVIAATNR 529
Query: 639 PDTLDPALLRPGRLDRKIEIPLPNEQARLEILKI 672
PD+++PAL RPGRLDR+IEI +P+ R +IL I
Sbjct: 530 PDSIEPALRRPGRLDREIEIGVPSSTQRSDILHI 563
Score = 271 (100.5 bits), Expect = 2.1e-63, Sum P(3) = 2.1e-63
Identities = 67/179 (37%), Positives = 93/179 (51%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R H +F I+ +Y+GES + + E+F A N P ++F+D++DAI R
Sbjct: 434 LARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRSASNATPAVVFIDDLDAIAPAR 493
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
EG + QR + LLN MDG V +I ATNRPD+++PAL RPGRLDR+IEI
Sbjct: 494 -KEG--GEELSQRMVATLLNLMDGISRTDGVVVIAATNRPDSIEPALRRPGRLDREIEIG 550
Query: 376 LPNEQAR--LAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIR 432
+P+ R + H I G I E + + F GADL +C EA +R
Sbjct: 551 VPSSTQRSDILHI----ILRGMRHSLSNIQVEQLAMATHGFVGADLSALCCEAAFVCLR 605
Score = 261 (96.9 bits), Expect = 6.7e-31, Sum P(2) = 6.7e-31
Identities = 61/185 (32%), Positives = 96/185 (51%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
+ K++GES + +R +F AR + P IIF DEID++ R E R + +LL
Sbjct: 794 LFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSLASIRGKENDGVSVS-DRVMSQLLV 852
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
++DG V +I ATNRPD +D ALLRPGR DR + + PNE R A + IH
Sbjct: 853 ELDGLHQRVGVTVIAATNRPDKIDSALLRPGRFDRLLYVGPPNETDREAI---LKIHLRK 909
Query: 396 IAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRS--EREYVTQEDFMKAVRKVSDN 453
I +I + + ++ + GAD+ +C EA + A+ E E ++ A+ ++
Sbjct: 910 IPCSSDICLKELASITKGYTGADISLICREAAIAALEESLEMEEISMRHLKAAISQIEPT 969
Query: 454 KKLDH 458
+ L +
Sbjct: 970 EILSY 974
Score = 168 (64.2 bits), Expect = 6.7e-31, Sum P(2) = 6.7e-31
Identities = 31/69 (44%), Positives = 45/69 (65%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+ + +GG +E +L E +E P + + F+R+G PP G L++GPPG KTL+ARAVAS
Sbjct: 721 VNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVAS 780
Query: 228 QLDANFLKV 236
+ NFL V
Sbjct: 781 EAKLNFLAV 789
Score = 137 (53.3 bits), Expect = 2.1e-63, Sum P(3) = 2.1e-63
Identities = 29/66 (43%), Positives = 40/66 (60%)
Query: 171 SAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 230
S +GGLS++ LR++I+ + L +G+ P KG L++GPPGTGKT LAR A
Sbjct: 385 SKLGGLSKEYAILRDIIDSSSIKNSL-SSLGLRPTKGVLIHGPPGTGKTSLARTFARHSG 443
Query: 231 ANFLKV 236
NF V
Sbjct: 444 VNFFSV 449
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 481 (174.4 bits), Expect = 2.7e-63, Sum P(2) = 2.7e-63
Identities = 133/334 (39%), Positives = 186/334 (55%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
I+ K+ GES +R++F A +P IIF+DE+DA+ +R EG + E +R + LL
Sbjct: 388 IISKFYGESESRLRQIFAEASLRRPSIIFIDELDALCPKR--EGAQNEVE-KRVVASLLT 444
Query: 336 QMDGFDSLG---QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIH 392
MDG S G Q+ ++ ATNRP LD AL RPGR D++IEI +PN Q RL + +
Sbjct: 445 LMDGIGSEGSEGQLVVLGATNRPHALDAALRRPGRFDKEIEIGIPNAQDRLDILQKL-LK 503
Query: 393 AGPIAKHGEIDYEAVVKLSDS---FNGADLRNVCTEAGLFAIR---SEREYVTQEDFMKA 446
P H E +++L+DS + GADL +C EAGL+A+R +R + + + +
Sbjct: 504 KVP---HSLTAAE-MMQLADSAHGYVGADLAALCKEAGLYALRRALGKRAHPSDTEVAGS 559
Query: 447 VRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLES-KLDYKPV 505
V ++ N L R A RE D K SD LE KL K
Sbjct: 560 VM-IAFNDFLQGMKDVRPSA-------MREVAV--DVPKV--SWSDIGGLEDVKLKLKQA 607
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
+E PL +P+ F R+GI PPKG LLYGPPG KT++A+A+A + NFL V +++KY+
Sbjct: 608 VEWPLKHPDSFIRMGIQPPKGVLLYGPPGCSKTMIAKALAHESGLNFLAVKGPELMNKYV 667
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 599
GES R +RE+F AR P I+F DEIDA+ R
Sbjct: 668 GESERAVREIFRKARMVSPSILFFDEIDALAVER 701
Score = 383 (139.9 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 90/206 (43%), Positives = 131/206 (63%)
Query: 496 LESKLD-YKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 554
L S+L + +ELPL ELF+ GI+PP+G LLYGPPGTGKTL+A+A+A+++ A+
Sbjct: 323 LSSQLKTIRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTLIAKAIANEVGAHVTV 382
Query: 555 VVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 614
+ I+ K+ GES +R++F A +P IIF+DE+DA+ +R EG + E +R +
Sbjct: 383 INGPEIISKFYGESESRLRQIFAEASLRRPSIIFIDELDALCPKR--EGAQNEVE-KRVV 439
Query: 615 MELLNQMDGFDSLG---QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEIL- 670
LL MDG S G Q+ ++ ATNRP LD AL RPGR D++IEI +PN Q RL+IL
Sbjct: 440 ASLLTLMDGIGSEGSEGQLVVLGATNRPHALDAALRRPGRFDKEIEIGIPNAQDRLDILQ 499
Query: 671 ----KI-HAGPIAKHGEIGDAATKWV 691
K+ H+ A+ ++ D+A +V
Sbjct: 500 KLLKKVPHSLTAAEMMQLADSAHGYV 525
Score = 223 (83.6 bits), Expect = 2.7e-63, Sum P(2) = 2.7e-63
Identities = 44/89 (49%), Positives = 66/89 (74%)
Query: 159 NMSHE-DPG-DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGT 216
N++ + D G +TY IGGLS Q++ +RE +ELPL ELF+ GI+PP+G LLYGPPGT
Sbjct: 304 NIAEDSDHGPQVTYDMIGGLSSQLKTIRETVELPLKRAELFKSYGISPPRGVLLYGPPGT 363
Query: 217 GKTLLARAVASQLDANFLKVVSSLFVTSK 245
GKTL+A+A+A+++ A+ + V++ + SK
Sbjct: 364 GKTLIAKAIANEVGAH-VTVINGPEIISK 391
Score = 193 (73.0 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 46/117 (39%), Positives = 66/117 (56%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTIMRYLP--REVDPLVYNMSHEDPGDITYSAIGGLSEQ 179
RR L K S T VA + +L ++V P D +++S IGGL +
Sbjct: 542 RRALGKRAHPSDTEVA-GSVMIAFNDFLQGMKDVRPSAMREVAVDVPKVSWSDIGGLEDV 600
Query: 180 IRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
+L++ +E PL +P+ F R+GI PPKG LLYGPPG KT++A+A+A + NFL V
Sbjct: 601 KLKLKQAVEWPLKHPDSFIRMGIQPPKGVLLYGPPGCSKTMIAKALAHESGLNFLAV 657
Score = 38 (18.4 bits), Expect = 7.9e-44, Sum P(2) = 7.9e-44
Identities = 13/53 (24%), Positives = 23/53 (43%)
Query: 201 GITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVTSKEDMAILMG 253
G +P G GPP G +A ++ F + ++ L + S + I +G
Sbjct: 2 GSSPLAGGTEGGPPLLGVAEAVQAEDDKVPKMFRRALAQLSLNSMKAANICIG 54
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 155/417 (37%), Positives = 237/417 (56%)
Query: 271 FYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 330
F I+ K GES +R+ F A + P IIF+DE+DAI +R E T + E +R +
Sbjct: 1 FSGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIV 57
Query: 331 MELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPIS 390
+LL MDG V ++ ATNRP+++DPAL R GR DR+++I +P+ RL +
Sbjct: 58 SQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI---LQ 114
Query: 391 IHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKV 450
IH + ++D E V + GADL +C+EA L AIR + + + ED + +
Sbjct: 115 IHTKNMKLADDVDLEQVGNETHGHVGADLAALCSEAALQAIRKKMDLIDLED--ETIDAE 172
Query: 451 SDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKV-SDNKKLES-KLDYKPVIEL 508
N + +R +A+ +E ++ + D LE K + + +++
Sbjct: 173 VMNSLAVTMDDFR-----WALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQY 227
Query: 509 PLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGES 568
P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ + ++ + GES
Sbjct: 228 PVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGES 287
Query: 569 ARLIREMFNYARNHQPCIIFMDEIDAI----GGRRFSEGTSADREIQRTLMELLNQMDGF 624
+RE+F+ AR PC++F DE+D+I GG G +ADR I ++L +MDG
Sbjct: 288 EANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVIN----QILTEMDGM 343
Query: 625 DSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK--IHAGPIAK 679
+ V +I ATNRPD +DPA+LRPGRLD+ I IPLP+E++R+ ILK + P+AK
Sbjct: 344 STKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAK 400
Score = 314 (115.6 bits), Expect = 4.7e-42, Sum P(2) = 4.7e-42
Identities = 78/235 (33%), Positives = 126/235 (53%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI---- 311
L + + + + ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 259 LAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 318
Query: 312 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 371
GG G +ADR I ++L +MDG + V +I ATNRPD +DPA+LRPGRLD+
Sbjct: 319 GGNIGDGGGAADRVIN----QILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQL 374
Query: 372 IEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI 431
I IPLP+E++R+A ++ P+AK ++D + + K+++ F+GADL +C A AI
Sbjct: 375 IYIPLPDEKSRVA-ILKANLRKSPVAK--DVDLDFLAKMTNGFSGADLTEICQRACKLAI 431
Query: 432 RSEREY-VTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMK 485
R E + +E + + ++ D R + A+R R V+ D K
Sbjct: 432 RESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 486
Score = 205 (77.2 bits), Expect = 4.7e-42, Sum P(2) = 4.7e-42
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 122 RRQLDKAKLKSGTRVALDMTTLTI----MRYLPREVDPLVYNMSHEDPGDITYSAIGGLS 177
R+++D L+ T A M +L + R+ + +P + + +T+ IGGL
Sbjct: 156 RKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLE 215
Query: 178 EQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
+ REL+E+++ P+ +P+ F + G+TP KG L YGPPG GKTLLA+A+A++ ANF+ +
Sbjct: 216 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 274
>UNIPROTKB|F1LZ09 [details] [associations]
symbol:F1LZ09 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005937 Pfam:PF00004 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00780208
Ensembl:ENSRNOT00000039743 Uniprot:F1LZ09
Length = 369
Score = 490 (177.5 bits), Expect = 2.2e-48, Sum P(2) = 2.2e-48
Identities = 95/162 (58%), Positives = 120/162 (74%)
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
+ELPL + EL++++GI PP+G L+YGPPG GKT+LA+ VA + A F+ VV S V KY+
Sbjct: 130 MELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKTVAHHMIAAFIHVVGSEFVHKYL 189
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 625
GE R+I ++F+ + + P IIF+DEIDAI +RF T ADRE+QR L+ELLNQMDGFD
Sbjct: 190 GEGPRIIWDVFHLDKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD 249
Query: 626 SLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARL 667
VK IMATNR DTLDP LLRPG LD KIE PLP+ + RL
Sbjct: 250 QNISVKAIMATNRKDTLDPTLLRPGHLDHKIEFPLPDHRKRL 291
Score = 409 (149.0 bits), Expect = 1.5e-62, Sum P(2) = 1.5e-62
Identities = 86/195 (44%), Positives = 114/195 (58%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + HH+ + S V KY+GE R+I ++F+ + + P IIF+DEIDAI +R
Sbjct: 164 LAKTVAHHMIAAFIHVVGSEFVHKYLGEGPRIIWDVFHLDKENAPAIIFIDEIDAIATKR 223
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F T ADRE+QR L+ELLNQMDGFD VK IMATNR DTLDP LLRPG LD KIE P
Sbjct: 224 FDAQTGADREVQRILLELLNQMDGFDQNISVKAIMATNRKDTLDPTLLRPGHLDHKIEFP 283
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSER 435
LP+ + RL S + E++ E V D +GAD+ ++C E+G+ +
Sbjct: 284 LPDHRKRLI----FSTITSKMNLSEEVNVEDYVACPDKISGADINSICQESGMLTVCENC 339
Query: 436 EYVTQEDFMKAVRKV 450
+DF KA + V
Sbjct: 340 HIFLAKDFKKAYKTV 354
Score = 262 (97.3 bits), Expect = 1.5e-62, Sum P(2) = 1.5e-62
Identities = 60/177 (33%), Positives = 102/177 (57%)
Query: 68 VREQLKELTKQYDKSENDLKALQSVGQV--SLSTSVSKCWTVIVKATNGPRYVVGCRRQL 125
++++ K L K++ ++ +K +QS+ V +V + TVIV + G +
Sbjct: 10 IKDEQKNLKKEFLHAQEKVKQIQSIPLVIGQFLEAVDQN-TVIVGSITGSNCYFCILSTI 68
Query: 126 DKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELRE 185
D+ LK VAL + T++ LP E + + ++ + ++ Y+ IG + Q +E+ E
Sbjct: 69 DQELLKPNASVALHKHSNTLVNVLPPEAESSIMMLTSDQKPNVIYADIGSMDIQKQEVWE 128
Query: 186 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
+ELPL + EL++++GI PP+G L+YGPPG GKT+LA+ VA + A F+ VV S FV
Sbjct: 129 AMELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKTVAHHMIAAFIHVVGSEFV 185
Score = 45 (20.9 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 436 EYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKV 490
E V ED++ K+S D NS E+G+ + +DF KA + V
Sbjct: 304 EEVNVEDYVACPDKISG---AD-INSICQESGMLTVCENCHIFLAKDFKKAYKTV 354
Score = 39 (18.8 bits), Expect = 2.2e-48, Sum P(2) = 2.2e-48
Identities = 6/25 (24%), Positives = 17/25 (68%)
Query: 34 MREQLKELTKQYDKSENDLKALQSV 58
++++ K L K++ ++ +K +QS+
Sbjct: 10 IKDEQKNLKKEFLHAQEKVKQIQSI 34
>UNIPROTKB|O42587 [details] [associations]
symbol:psmc3-a "26S protease regulatory subunit 6A-A"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 CTD:4913 TIGRFAMs:TIGR01242 EMBL:Y10461
RefSeq:NP_001080249.1 UniGene:Xl.12803 ProteinModelPortal:O42587
PRIDE:O42587 GeneID:379941 KEGG:xla:379941 Xenbase:XB-GENE-962533
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 Uniprot:O42587
Length = 405
Score = 520 (188.1 bits), Expect = 6.3e-50, P = 6.3e-50
Identities = 102/191 (53%), Positives = 136/191 (71%)
Query: 485 KAVRKVSDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARA 543
+ + SD L+ ++ + I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA
Sbjct: 164 RPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 223
Query: 544 VASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEG 603
A+Q A FLK+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +RF
Sbjct: 224 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSE 283
Query: 604 TSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE 663
+ DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDRKIE P+PNE
Sbjct: 284 KAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNE 343
Query: 664 QARLEILKIHA 674
+AR I++IH+
Sbjct: 344 EARARIMQIHS 354
Score = 365 (133.5 bits), Expect = 9.6e-59, Sum P(2) = 9.6e-59
Identities = 77/177 (43%), Positives = 108/177 (61%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R + T+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +R
Sbjct: 220 LARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKR 279
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
F + DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDRKIE P
Sbjct: 280 FDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFP 339
Query: 376 LPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIR 432
+PNE+AR A + IH+ + +++YE + + + EAG+ A+R
Sbjct: 340 MPNEEAR-ARI--MQIHSRKMNVSPDVNYEELARCPTISMALSAKQFGVEAGMIALR 393
Score = 272 (100.8 bits), Expect = 9.6e-59, Sum P(2) = 9.6e-59
Identities = 78/233 (33%), Positives = 118/233 (50%)
Query: 15 QDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCVREQLKE 74
++ K TE E+ R R + ++K + + + ++L+A++ + + V + L
Sbjct: 15 EEVLKMSTE--EIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPY 72
Query: 75 LTKQY----DKSENDLKALQSVGQVSL-STSVSKCWTVIVKATNGPRYVVGCRRQLDKAK 129
L D ND + + + L S KC ++K + Y + +D K
Sbjct: 73 LVSNVIELLDVDPNDQE--EDGANIDLDSQRKGKC--AVIKTSTRQTYFLPVIGLVDAEK 128
Query: 130 LKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIEL 189
LK G V ++ + I+ LP E D V M ++ YS IGGL +QI+EL E I L
Sbjct: 129 LKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVL 188
Query: 190 PLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
P+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FLK+ V
Sbjct: 189 PMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLV 241
>UNIPROTKB|J9NWB0 [details] [associations]
symbol:J9NWB0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074818 EMBL:AAEX03014432
Ensembl:ENSCAFT00000039483 OMA:AGSELIQ Uniprot:J9NWB0
Length = 436
Score = 460 (167.0 bits), Expect = 2.3e-47, Sum P(3) = 2.3e-47
Identities = 93/195 (47%), Positives = 133/195 (68%)
Query: 481 EDFMKAVRKV-SDNKKLESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKT 538
E KA ++ +D + L++++ + K +ELPL +PE ++ +GI PPKG +LYGPPGT K
Sbjct: 177 EKVEKAPQETYADIRGLDNQIQEIKESLELPLTHPENYEEMGIKPPKGVILYGPPGTVK- 235
Query: 539 LLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGR 598
AVA++ A FL+V S ++ KY+G+ +++RE F A H P I+F+DEIDAIG R
Sbjct: 236 ----AVANRTSATFLRVAGSELIQKYLGDGPKVVRESFRVAEEHAPSIVFIDEIDAIGTR 291
Query: 599 RFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEI 658
R+ + +REIQRT++ELLNQ+DGFDS G VK+IMATNR TLDPAL L ++
Sbjct: 292 RYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIKTLDPALSHQAALTGRLS- 350
Query: 659 PLPNEQARLEILKIH 673
PLP+E+ + I +IH
Sbjct: 351 PLPDEKTKKHIFQIH 365
Score = 405 (147.6 bits), Expect = 1.4e-57, Sum P(2) = 1.4e-57
Identities = 82/189 (43%), Positives = 118/189 (62%)
Query: 267 TYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI 326
T+ S ++ KY+G+ +++RE F A H P I+F+DEIDAIG RR+ + +REI
Sbjct: 244 TFLRVAGSELIQKYLGDGPKVVRESFRVAEEHAPSIVFIDEIDAIGTRRYDSNSGGEREI 303
Query: 327 QRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHT 386
QRT++ELLNQ+DGFDS G VK+IMATNR TLDPAL L ++ PLP+E+ + H
Sbjct: 304 QRTMLELLNQLDGFDSRGDVKVIMATNRIKTLDPALSHQAALTGRLS-PLPDEKTK-KHI 361
Query: 387 WPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKA 446
+ IH + ++ + ++ D +GAD++ +CTEAGL A+R R VT EDF K+
Sbjct: 362 F--QIHTSRMTLADDVTLDLIMA-KDDLSGADIKAICTEAGLMALREHRMKVTNEDFKKS 418
Query: 447 VRKVSDNKK 455
V K+
Sbjct: 419 KENVLYKKQ 427
Score = 219 (82.2 bits), Expect = 1.4e-57, Sum P(2) = 1.4e-57
Identities = 62/177 (35%), Positives = 96/177 (54%)
Query: 69 REQLKELTKQYDKSENDLKALQ--SVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRRQLD 126
+EQ+K L ++ ++ + + L+ S+ V+L + VIV + G + V +D
Sbjct: 82 QEQMKPLEEKQEEERSKVDDLRGTSMSVVTLEEIIDGNH-VIVSTSVGSEHYVSILSFVD 140
Query: 127 KAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHED----PGDITYSAIGGLSEQIRE 182
K L+ G L+ ++ + DPLV M E P + TY+ I GL QI+E
Sbjct: 141 KDLLEPGCSNLLNHKLHAVIVVFMDDTDPLVTVMKVEKVEKAPQE-TYADIRGLDNQIQE 199
Query: 183 LREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 239
++E +ELPL +PE ++ +GI PPKG +LYGPPGT K AVA++ A FL+V S
Sbjct: 200 IKESLELPLTHPENYEEMGIKPPKGVILYGPPGTVK-----AVANRTSATFLRVAGS 251
Score = 76 (31.8 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 22/72 (30%), Positives = 33/72 (45%)
Query: 424 TEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDF 483
T+ +F I + R + + + + D D + TEAGL A+R R VT EDF
Sbjct: 357 TKKHIFQIHTSRMTLADDVTLDLIMAKDDLSGAD-IKAICTEAGLMALREHRMKVTNEDF 415
Query: 484 MKAVRKVSDNKK 495
K+ V K+
Sbjct: 416 KKSKENVLYKKQ 427
Score = 41 (19.5 bits), Expect = 2.3e-47, Sum P(3) = 2.3e-47
Identities = 7/36 (19%), Positives = 19/36 (52%)
Query: 75 LTKQYDKSENDLKALQSVGQVSLSTSVSKCWTVIVK 110
++ + +K + K + ++ L T ++CW ++K
Sbjct: 29 VSTRVEKKKKKTKGPDAASKLPLVTPHTQCWLKLLK 64
Score = 38 (18.4 bits), Expect = 2.3e-47, Sum P(3) = 2.3e-47
Identities = 20/74 (27%), Positives = 35/74 (47%)
Query: 238 SSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARN 297
+S+ V + E+ I+ GN + ST + Y S VDK + E + N+ +
Sbjct: 105 TSMSVVTLEE--IIDGNHVIV-STSVGSEHYVSILS--FVDKDLLEPG--CSNLLNH-KL 156
Query: 298 HQPCIIFMDEIDAI 311
H ++FMD+ D +
Sbjct: 157 HAVIVVFMDDTDPL 170
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 344 (126.2 bits), Expect = 5.4e-57, Sum P(3) = 5.4e-57
Identities = 71/181 (39%), Positives = 107/181 (59%)
Query: 494 KKLESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFL 553
K L+ KL + +E P+ + F ++GI+P +G LL+GPPG KT LA+A A+ A+F
Sbjct: 292 KDLKKKL--QQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAANAAQASFF 349
Query: 554 KVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI-QR 612
+ + + Y+GE L+R F AR P IIF DE D + +R E +S + +R
Sbjct: 350 SLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRGDESSSNSSTVGER 409
Query: 613 TLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKI 672
L LL +MDG + + ++ ATNRP +D AL+RPGR D + +P P+ +AR EIL++
Sbjct: 410 LLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQV 469
Query: 673 H 673
H
Sbjct: 470 H 470
Score = 298 (110.0 bits), Expect = 3.9e-23, P = 3.9e-23
Identities = 69/193 (35%), Positives = 110/193 (56%)
Query: 485 KAVRKVSDNKKLESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAV 544
+A ++ N++ L + +I P P + +G+ P+G LLYGPPGTGKT L RAV
Sbjct: 19 RAEAEIGGNERALQAL--RELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAV 76
Query: 545 ASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNH----QPCIIFMDEIDAIGGRRF 600
+ DA+ + + ++ + GES +++RE F A +H +P +IF+DEID + RR
Sbjct: 77 VQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRRD 136
Query: 601 SEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPL 660
+ D I L L++ S +V ++ +TNR D +DPAL R GR D +E+
Sbjct: 137 AR-REQDVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVST 195
Query: 661 PNEQARLEILKIH 673
PNE+ RL+IL+++
Sbjct: 196 PNEEDRLKILQLY 208
Score = 263 (97.6 bits), Expect = 3.8e-29, Sum P(2) = 3.8e-29
Identities = 55/178 (30%), Positives = 94/178 (52%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L + + + + ++F + + Y+GE L+R F AR P IIF DE D + +R
Sbjct: 336 LAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKR 395
Query: 316 FSEGTSADREI-QRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEI 374
E +S + +R L LL +MDG + + ++ ATNRP +D AL+RPGR D + +
Sbjct: 396 GDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYV 455
Query: 375 PLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIR 432
P P+ +AR + +H + ++D + + +D F GA+L +C E+G ++R
Sbjct: 456 PPPDLEARFEI---LQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCRESGTVSLR 510
Score = 217 (81.4 bits), Expect = 5.4e-57, Sum P(3) = 5.4e-57
Identities = 57/177 (32%), Positives = 93/177 (52%)
Query: 280 YIGESARLIREMFNYARNH----QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
+ GES +++RE F A +H +P +IF+DEID + RR + D I L L++
Sbjct: 96 HAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRRDAR-REQDVRIASQLFTLMD 154
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
S +V ++ +TNR D +DPAL R GR D +E+ PNE+ RL + ++
Sbjct: 155 SNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKI---LQLYTKK 211
Query: 396 IAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIR--SEREYVTQEDFMKAVRKV 450
+ +D +A+ + + GADL +C EA + A + S+ +T +DF K + V
Sbjct: 212 VNLDPSVDLQAIAISCNGYVGADLEALCREATISASKRSSDSLILTSQDF-KIAKSV 267
Score = 161 (61.7 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 54/181 (29%), Positives = 92/181 (50%)
Query: 83 ENDLKALQS-VGQVSLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMT 141
E+ LK LQ +V+L SV I + NG YV L + S ++ + D
Sbjct: 199 EDRLKILQLYTKKVNLDPSVDL--QAIAISCNG--YVGADLEALCREATISASKRSSDSL 254
Query: 142 TLTIMRY-LPREV-DPLVYN-MSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQ 198
LT + + + V P + ++ E P +T+ +GGL + ++L++ +E P+ + F
Sbjct: 255 ILTSQDFKIAKSVVGPSINRGITVEIP-KVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFV 313
Query: 199 RVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV-VSSLFVTSKEDMAILMGNQLK 257
++GI+P +G LL+GPPG KT LA+A A+ A+F + + LF + L+ N +
Sbjct: 314 KMGISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQ 373
Query: 258 R 258
R
Sbjct: 374 R 374
Score = 141 (54.7 bits), Expect = 5.4e-57, Sum P(3) = 5.4e-57
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 173 IGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDAN 232
IGG ++ LRE+I P P + +G+ P+G LLYGPPGTGKT L RAV + DA+
Sbjct: 24 IGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAH 83
Query: 233 FL 234
+
Sbjct: 84 LI 85
Score = 38 (18.4 bits), Expect = 2.5e-38, Sum P(3) = 2.5e-38
Identities = 11/56 (19%), Positives = 24/56 (42%)
Query: 450 VSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKPV 505
V+ ++D + AG F E +ED +K ++ + L+ +D + +
Sbjct: 168 VASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNLDPSVDLQAI 223
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 407 (148.3 bits), Expect = 8.5e-56, Sum P(2) = 8.5e-56
Identities = 75/175 (42%), Positives = 113/175 (64%)
Query: 509 PLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGES 568
P+ P+ ++ +GI P G L+YGPPG GKTLLA+A+AS+ ANF+ V +++KY+GES
Sbjct: 585 PIRYPKKYKNMGIDSPAGVLMYGPPGCGKTLLAKAIASECQANFISVKGPELLNKYVGES 644
Query: 569 ARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLG 628
R +R++F A PC+IF DE DA+ +R ++ +R + +LL +MDG +
Sbjct: 645 ERAVRQVFQRAAASSPCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLTEMDGLEKRS 704
Query: 629 QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGEI 683
+V +I ATNRPD +D A+ RPGRLD+ + +PLP+ + R EILK I H ++
Sbjct: 705 EVFIIAATNRPDIIDAAMCRPGRLDKMVYVPLPSPEERCEILKTLTHKIPIHQDV 759
Score = 292 (107.8 bits), Expect = 2.3e-34, Sum P(3) = 2.3e-34
Identities = 69/184 (37%), Positives = 106/184 (57%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
+++KY+GES R +R++F A PC+IF DE DA+ +R ++ +R + +LL
Sbjct: 636 LLNKYVGESERAVRQVFQRAAASSPCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLT 695
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
+MDG + +V +I ATNRPD +D A+ RPGRLD+ + +PLP+ + R ++ H P
Sbjct: 696 EMDGLEKRSEVFIIAATNRPDIIDAAMCRPGRLDKMVYVPLPSPEERCEILKTLT-HKIP 754
Query: 396 IAKHGEIDYEAV-VKLS-DSFNGADLRNVCTEAGLFAIR-------SEREYVTQEDFMKA 446
I H ++D V L SF+GADL + EA AI +E + VT EDF+ A
Sbjct: 755 I--HQDVDLIKVGTDLRCHSFSGADLSLLVKEAANHAISRGFDNNSTEPDTVTMEDFIFA 812
Query: 447 VRKV 450
+ K+
Sbjct: 813 LSKI 816
Score = 258 (95.9 bits), Expect = 3.3e-24, Sum P(2) = 3.3e-24
Identities = 60/146 (41%), Positives = 87/146 (59%)
Query: 496 LESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 554
+ES L D + IE P+ +PE++ +G+ PP+G LL+GP G GKTLLA+A+A +L
Sbjct: 221 VESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKAIAGELKVPLFA 280
Query: 555 VVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 614
+ ++ I GES +R +F+ A PCIIF+DEIDAI +R E S D E +R +
Sbjct: 281 ISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKR--ESASKDME-RRIV 337
Query: 615 MELLNQMDGFDSLGQVKMIMATNRPD 640
+LL MD SL + +TN P+
Sbjct: 338 SQLLTCMD---SLNYLSSNNSTNEPN 360
Score = 247 (92.0 bits), Expect = 8.5e-56, Sum P(2) = 8.5e-56
Identities = 92/360 (25%), Positives = 158/360 (43%)
Query: 159 NMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGK 218
N+S+ I +S +GG+ +R++RE IE P+ +PE++ +G+ PP+G LL+GP G GK
Sbjct: 204 NLSNGLIPTINFSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGK 263
Query: 219 TLLARAVASQLDANFL-----KVVSSLFVTSKEDMAILMGNQLKRRSTH-HLEK--TYFP 270
TLLA+A+A +L ++ S + S+ + L N + + +++ P
Sbjct: 264 TLLAKAIAGELKVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAP 323
Query: 271 FYSSAIVD--KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQR 328
SA D + I + NY ++ ++ + ++ + D +
Sbjct: 324 KRESASKDMERRIVSQLLTCMDSLNYLSSNNSTNEPNEQTEQQQQQQ-QDIIEVDSQATT 382
Query: 329 TLMELLN----QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLA 384
T N Q + F G V +I ATNRP++LD AL GR D++I + +P++ AR
Sbjct: 383 TTTASNNNNKQQKNDFKK-GHVIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCK 441
Query: 385 HTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFM 444
+ + + DYE + L+ + GAD+ + EA A S T
Sbjct: 442 I---LKVITSKMRLENNFDYEEIATLTPGYVGADINLLVKEA---ATNSVNRIFTSNLNG 495
Query: 445 KAVRKVSDNKKLDHCNSYRTEAGLFAIRSERE-------YVTQEDFMKAVRKVSDNKKLE 497
+ S + + N+ L + E Y+ DF KA++KV K E
Sbjct: 496 ASSSSSSSSSSTTNINNIGLSTELLISKEPLEPEKLNSLYIEMIDFKKALKKVVPAAKRE 555
Score = 165 (63.1 bits), Expect = 2.3e-34, Sum P(3) = 2.3e-34
Identities = 32/70 (45%), Positives = 46/70 (65%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++T+ +G LS EL I P+ P+ ++ +GI P G L+YGPPG GKTLLA+A+A
Sbjct: 562 NVTWDDVGALSGVREELTNSILRPIRYPKKYKNMGIDSPAGVLMYGPPGCGKTLLAKAIA 621
Query: 227 SQLDANFLKV 236
S+ ANF+ V
Sbjct: 622 SECQANFISV 631
Score = 105 (42.0 bits), Expect = 3.3e-24, Sum P(2) = 3.3e-24
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 628 GQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKI 672
G V +I ATNRP++LD AL GR D++I + +P++ AR +ILK+
Sbjct: 401 GHVIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKV 445
Score = 46 (21.3 bits), Expect = 2.3e-34, Sum P(3) = 2.3e-34
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 473 SEREYVTQEDFMKAVRKVSDNKKLESKLDY 502
+E + VT EDF+ A+ K+ + + +L Y
Sbjct: 799 TEPDTVTMEDFIFALSKIKPSVSRKDELMY 828
Score = 38 (18.4 bits), Expect = 7.8e-34, Sum P(2) = 7.8e-34
Identities = 6/24 (25%), Positives = 14/24 (58%)
Query: 485 KAVRKVSDNKKLESKLDYKPVIEL 508
K ++ ++ +LE+ DY+ + L
Sbjct: 441 KILKVITSKMRLENNFDYEEIATL 464
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 567 (204.7 bits), Expect = 1.0e-54, P = 1.0e-54
Identities = 147/409 (35%), Positives = 225/409 (55%)
Query: 276 IVDKYIGESARLIREMF------NYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRT 329
I YIGE+ +R +F + A+++ P ++F+DEID I R S+ T + R
Sbjct: 357 ISGSYIGETEENLRNIFQEASDKSIAKSNSPIVVFIDEIDTICPPR-SKSTQNE---SRV 412
Query: 330 LMELLNQMDGFDSL-GQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWP 388
+ + L +DG + G + +I ATNRP+ +D AL RPGRLDR+IEIP+PN+Q RL
Sbjct: 413 VGQFLTLLDGIGARKGNLIIIAATNRPNQIDNALRRPGRLDREIEIPVPNKQQRL-DILK 471
Query: 389 ISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVR 448
+ PI+ + + + + GA+++ +C ++ A Q +
Sbjct: 472 LYCSKLPISPTPSNLLDQIADETVGYVGANIQFLCRDSAFIAFSKYNLLKYQNNEQN--E 529
Query: 449 KVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQ-EDFMKAVRKVS--DNKKLES-KLDYKP 504
++ K L +R +I++ + + E ++ + VS D L+ K + +
Sbjct: 530 NENEKKYLIEIEDFRE-----SIKNNPASILKGEHLVENISNVSWDDIGGLDDIKEELRQ 584
Query: 505 VIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKY 564
IE P L E F++ G++PPKG +LYGPPG KT L +AVAS +FL + + I Y
Sbjct: 585 AIEWPNLYKESFEKFGLSPPKGIILYGPPGCSKTTLVKAVASSSKLSFLSLSGATIFSPY 644
Query: 565 IGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR-FSEGTSADREIQRTLMELLNQMDG 623
+G+S + IR++F AR P I+F DEIDAI +R S+ +S D R L LN+MDG
Sbjct: 645 LGDSEQTIRDIFKKARQTTPSILFFDEIDAIVSKRNLSDNSSGDNAQSRVLSTFLNEMDG 704
Query: 624 FDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKI 672
+ L V +I ATNR D +D ALLRPGR D+ +EI LP++ +RL+ILKI
Sbjct: 705 VEQLNGVIVIGATNRLDMIDNALLRPGRFDKILEIKLPDQLSRLKILKI 753
Score = 338 (124.0 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 74/176 (42%), Positives = 109/176 (61%)
Query: 509 PLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGES 568
P+L P++F+ + I PPKG LL GPPGTGKT L R V D + + + I YIGE+
Sbjct: 306 PILFPQVFKTLNIDPPKGILLKGPPGTGKTHLVRTVCDAYDIEMISIDCAKISGSYIGET 365
Query: 569 ARLIREMF------NYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
+R +F + A+++ P ++F+DEID I R S+ T + R + + L +D
Sbjct: 366 EENLRNIFQEASDKSIAKSNSPIVVFIDEIDTICPPR-SKSTQNE---SRVVGQFLTLLD 421
Query: 623 GFDSL-GQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPI 677
G + G + +I ATNRP+ +D AL RPGRLDR+IEIP+PN+Q RL+ILK++ +
Sbjct: 422 GIGARKGNLIIIAATNRPNQIDNALRRPGRLDREIEIPVPNKQQRLDILKLYCSKL 477
Score = 310 (114.2 bits), Expect = 2.9e-37, Sum P(2) = 2.9e-37
Identities = 70/192 (36%), Positives = 108/192 (56%)
Query: 267 TYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR-FSEGTSADRE 325
++ + I Y+G+S + IR++F AR P I+F DEIDAI +R S+ +S D
Sbjct: 631 SFLSLSGATIFSPYLGDSEQTIRDIFKKARQTTPSILFFDEIDAIVSKRNLSDNSSGDNA 690
Query: 326 IQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAH 385
R L LN+MDG + L V +I ATNR D +D ALLRPGR D+ +EI LP++ +RL
Sbjct: 691 QSRVLSTFLNEMDGVEQLNGVIVIGATNRLDMIDNALLRPGRFDKILEIKLPDQLSRLKI 750
Query: 386 TWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE--REYVTQEDF 443
+ I I ++ + L++ F+GADL N+C EA ++R + +V DF
Sbjct: 751 ---LKIKTKSIPLSDNVNLIEISNLTNGFSGADLENLCREASFQSLRRDLLNGFVEMYDF 807
Query: 444 MKAVRKVSDNKK 455
+ + K+++ K
Sbjct: 808 LNCLSKINNQSK 819
Score = 174 (66.3 bits), Expect = 2.9e-37, Sum P(2) = 2.9e-37
Identities = 34/74 (45%), Positives = 49/74 (66%)
Query: 163 EDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLA 222
E+ ++++ IGGL + ELR+ IE P L E F++ G++PPKG +LYGPPG KT L
Sbjct: 562 ENISNVSWDDIGGLDDIKEELRQAIEWPNLYKESFEKFGLSPPKGIILYGPPGCSKTTLV 621
Query: 223 RAVASQLDANFLKV 236
+AVAS +FL +
Sbjct: 622 KAVASSSKLSFLSL 635
Score = 169 (64.5 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 47/148 (31%), Positives = 74/148 (50%)
Query: 173 IGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDAN 232
IGGL+EQI+ L E++ P+L P++F+ + I PPKG LL GPPGTGKT L R V D
Sbjct: 289 IGGLNEQIKLLEEMMIYPILFPQVFKTLNIDPPKGILLKGPPGTGKTHLVRTVCDAYDIE 348
Query: 233 FLKV----VSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLI 288
+ + +S ++ E+ + N + S + K+ P +V +I E +
Sbjct: 349 MISIDCAKISGSYIGETEEN---LRNIFQEASDKSIAKSNSPI----VV--FIDEIDTIC 399
Query: 289 REMFNYARNHQPCI-IFMDEIDAIGGRR 315
+N + F+ +D IG R+
Sbjct: 400 PPRSKSTQNESRVVGQFLTLLDGIGARK 427
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 99/178 (55%), Positives = 136/178 (76%)
Query: 497 ESKL-DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 555
ES++ + K +ELPL +PE ++ +GIT PKG +LYG PGTGKTLLA+AVA+ A F++
Sbjct: 189 ESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKAVANSTSATFIRA 248
Query: 556 VSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM 615
S +V K GE ARL+R++F A+ P I+F+DEIDA+G +RF + ++E+QRTL+
Sbjct: 249 TGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEIDAVGTKRFDTSSRGEQEVQRTLL 308
Query: 616 ELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
ELLNQ+DGF+S G VK+IMATNR D+LDPAL+RPGR+DRKIE+P P+E+ R +I IH
Sbjct: 309 ELLNQLDGFESRGDVKIIMATNRIDSLDPALIRPGRIDRKIELPKPDEKTRQKIFTIH 366
Score = 462 (167.7 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 91/189 (48%), Positives = 131/189 (69%)
Query: 267 TYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI 326
T+ S +V K GE ARL+R++F A+ P I+F+DEIDA+G +RF + ++E+
Sbjct: 244 TFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEIDAVGTKRFDTSSRGEQEV 303
Query: 327 QRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHT 386
QRTL+ELLNQ+DGF+S G VK+IMATNR D+LDPAL+RPGR+DRKIE+P P+E+ R
Sbjct: 304 QRTLLELLNQLDGFESRGDVKIIMATNRIDSLDPALIRPGRIDRKIELPKPDEKTRQKI- 362
Query: 387 WPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKA 446
+IH + + YE V+ S +GA+++ VCTEAG+ A+R++R+ V +DF KA
Sbjct: 363 --FTIHTSGMTIQKAVTYENVLGKEKSISGAEIKAVCTEAGMLALRAQRKCVGTDDFEKA 420
Query: 447 VRKVSDNKK 455
V+ V +KK
Sbjct: 421 VKSVMLSKK 429
Score = 215 (80.7 bits), Expect = 5.7e-18, Sum P(2) = 5.7e-18
Identities = 46/118 (38%), Positives = 66/118 (55%)
Query: 169 TYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQ 228
T+ IGG QI+EL+E +ELPL +PE ++ +GIT PKG +LYG PGTGKTLLA+AVA+
Sbjct: 181 TFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKAVANS 240
Query: 229 LDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESAR 286
A F++ S V + + Q+ + + F A+ K S+R
Sbjct: 241 TSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEIDAVGTKRFDTSSR 298
Score = 79 (32.9 bits), Expect = 5.7e-18, Sum P(2) = 5.7e-18
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 438 VTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKK 495
VT E+ + + +S + C TEAG+ A+R++R+ V +DF KAV+ V +KK
Sbjct: 376 VTYENVLGKEKSISGAEIKAVC----TEAGMLALRAQRKCVGTDDFEKAVKSVMLSKK 429
>WB|WBGene00003119 [details] [associations]
symbol:mac-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006629 "lipid metabolic process" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0019915 "lipid
storage" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0040007 GO:GO:0002119 GO:GO:0006629
GO:GO:0000003 GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AL117203 PIR:T31591
RefSeq:NP_496814.1 ProteinModelPortal:Q9NAG4 SMR:Q9NAG4
IntAct:Q9NAG4 STRING:Q9NAG4 PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7
GeneID:174974 KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974
WormBase:Y48C3A.7 InParanoid:Q9NAG4 NextBio:886252
ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 351 (128.6 bits), Expect = 2.1e-51, Sum P(4) = 2.1e-51
Identities = 74/164 (45%), Positives = 109/164 (66%)
Query: 509 PLLNPELFQRVGIT-PPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGE 567
P+ + F +GI P+G LL GPPG GKTLLA+AVA++ NF+ V +++ Y+GE
Sbjct: 552 PIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMYVGE 611
Query: 568 SARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSL 627
S R +R +F AR+ QPC+IF DEIDA+ +R S G S+ R + +LL +MDG +
Sbjct: 612 SERAVRTVFQRARDSQPCVIFFDEIDALVPKR-SHGESSGGA--RLVNQLLTEMDGVEGR 668
Query: 628 GQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
+V +I ATNRPD +D A+LRPGRLD+ + + P+ + R++IL+
Sbjct: 669 QKVFLIGATNRPDIVDAAILRPGRLDKILFVDFPSVEDRVDILR 712
Score = 262 (97.3 bits), Expect = 3.4e-28, Sum P(2) = 3.4e-28
Identities = 63/161 (39%), Positives = 97/161 (60%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
+++ Y+GES R +R +F AR+ QPC+IF DEIDA+ +R S G S+ R + +LL
Sbjct: 604 LLNMYVGESERAVRTVFQRARDSQPCVIFFDEIDALVPKR-SHGESSGGA--RLVNQLLT 660
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
+MDG + +V +I ATNRPD +D A+LRPGRLD+ + + P+ + R+ S G
Sbjct: 661 EMDGVEGRQKVFLIGATNRPDIVDAAILRPGRLDKILFVDFPSVEDRV-DILRKSTKNGT 719
Query: 396 IAKHGE-IDYEAVVKLSD--SFNGADLRNVCTEAGLFAIRS 433
GE ID+ + +L + F GADL + E+ L A+++
Sbjct: 720 RPMLGEDIDFHEIAQLPELAGFTGADLAALIHESSLLALQA 760
Score = 220 (82.5 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 43/118 (36%), Positives = 76/118 (64%)
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
+ + L P+ F +G+ PP+G +++GPPG GKT+ A+AVA +L L++ ++ +V
Sbjct: 221 LAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVS 280
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM-ELLNQMD 622
GE+ IR +F+ A+ + PCI+ +D+IDAI RR +A RE++R ++ +L + +D
Sbjct: 281 GETEEKIRRLFDTAKQNSPCILILDDIDAIAPRR----ETAQREMERRVVSQLCSSLD 334
Score = 138 (53.6 bits), Expect = 2.1e-51, Sum P(4) = 2.1e-51
Identities = 30/95 (31%), Positives = 54/95 (56%)
Query: 149 LPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGC 208
LPR + + +S + + + IGG Q E+ + + L P+ F +G+ PP+G
Sbjct: 185 LPRGLGAVSDTISPRE-SHVKFEHIGGADRQFLEVCR-LAMHLKRPKTFATLGVDPPRGF 242
Query: 209 LLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVT 243
+++GPPG GKT+ A+AVA +L L++ ++ V+
Sbjct: 243 IVHGPPGCGKTMFAQAVAGELAIPMLQLAATELVS 277
Score = 136 (52.9 bits), Expect = 5.5e-28, Sum P(2) = 5.5e-28
Identities = 31/71 (43%), Positives = 44/71 (61%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGIT-PPKGCLLYGPPGTGKTLLARAV 225
D+++ IG L E ++L I P+ + F +GI P+G LL GPPG GKTLLA+AV
Sbjct: 529 DVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAV 588
Query: 226 ASQLDANFLKV 236
A++ NF+ V
Sbjct: 589 ANETGMNFISV 599
Score = 105 (42.0 bits), Expect = 2.1e-51, Sum P(4) = 2.1e-51
Identities = 23/67 (34%), Positives = 42/67 (62%)
Query: 273 SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM- 331
++ +V GE+ IR +F+ A+ + PCI+ +D+IDAI RR +A RE++R ++
Sbjct: 272 ATELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIAPRR----ETAQREMERRVVS 327
Query: 332 ELLNQMD 338
+L + +D
Sbjct: 328 QLCSSLD 334
Score = 105 (42.0 bits), Expect = 2.1e-51, Sum P(4) = 2.1e-51
Identities = 28/86 (32%), Positives = 45/86 (52%)
Query: 346 VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYE 405
V +I T+RPD +D L R GR + +I + +P+E AR I + G++ +
Sbjct: 371 VLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILEKIC----KVNLAGDVTLK 426
Query: 406 AVVKLSDSFNGADLRNVCTEAGLFAI 431
+ KL+ + GADL+ + EA AI
Sbjct: 427 QIAKLTPGYVGADLQALIREAAKVAI 452
Score = 98 (39.6 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 630 VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGEIGDAATK 689
V +I T+RPD +D L R GR + +I + +P+E AR +IL+ I K GD K
Sbjct: 371 VLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILE----KICKVNLAGDVTLK 426
Query: 690 WVLPFTAG 697
+ T G
Sbjct: 427 QIAKLTPG 434
Score = 37 (18.1 bits), Expect = 1.6e-27, Sum P(2) = 1.6e-27
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 484 MKAVRKVSDNKKLESKLDYKPVIELPLL 511
++ V K +++K+E K V E+P++
Sbjct: 65 IQLVAKEENDEKMEEKEAMDDVQEIPIV 92
>UNIPROTKB|Q9NAG4 [details] [associations]
symbol:mac-1 "Protein MAC-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0040007 GO:GO:0002119 GO:GO:0006629 GO:GO:0000003
GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AL117203 PIR:T31591 RefSeq:NP_496814.1
ProteinModelPortal:Q9NAG4 SMR:Q9NAG4 IntAct:Q9NAG4 STRING:Q9NAG4
PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7 GeneID:174974
KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974 WormBase:Y48C3A.7
InParanoid:Q9NAG4 NextBio:886252 ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 351 (128.6 bits), Expect = 2.1e-51, Sum P(4) = 2.1e-51
Identities = 74/164 (45%), Positives = 109/164 (66%)
Query: 509 PLLNPELFQRVGIT-PPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGE 567
P+ + F +GI P+G LL GPPG GKTLLA+AVA++ NF+ V +++ Y+GE
Sbjct: 552 PIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMYVGE 611
Query: 568 SARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSL 627
S R +R +F AR+ QPC+IF DEIDA+ +R S G S+ R + +LL +MDG +
Sbjct: 612 SERAVRTVFQRARDSQPCVIFFDEIDALVPKR-SHGESSGGA--RLVNQLLTEMDGVEGR 668
Query: 628 GQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
+V +I ATNRPD +D A+LRPGRLD+ + + P+ + R++IL+
Sbjct: 669 QKVFLIGATNRPDIVDAAILRPGRLDKILFVDFPSVEDRVDILR 712
Score = 262 (97.3 bits), Expect = 3.4e-28, Sum P(2) = 3.4e-28
Identities = 63/161 (39%), Positives = 97/161 (60%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
+++ Y+GES R +R +F AR+ QPC+IF DEIDA+ +R S G S+ R + +LL
Sbjct: 604 LLNMYVGESERAVRTVFQRARDSQPCVIFFDEIDALVPKR-SHGESSGGA--RLVNQLLT 660
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
+MDG + +V +I ATNRPD +D A+LRPGRLD+ + + P+ + R+ S G
Sbjct: 661 EMDGVEGRQKVFLIGATNRPDIVDAAILRPGRLDKILFVDFPSVEDRV-DILRKSTKNGT 719
Query: 396 IAKHGE-IDYEAVVKLSD--SFNGADLRNVCTEAGLFAIRS 433
GE ID+ + +L + F GADL + E+ L A+++
Sbjct: 720 RPMLGEDIDFHEIAQLPELAGFTGADLAALIHESSLLALQA 760
Score = 220 (82.5 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 43/118 (36%), Positives = 76/118 (64%)
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
+ + L P+ F +G+ PP+G +++GPPG GKT+ A+AVA +L L++ ++ +V
Sbjct: 221 LAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVS 280
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM-ELLNQMD 622
GE+ IR +F+ A+ + PCI+ +D+IDAI RR +A RE++R ++ +L + +D
Sbjct: 281 GETEEKIRRLFDTAKQNSPCILILDDIDAIAPRR----ETAQREMERRVVSQLCSSLD 334
Score = 138 (53.6 bits), Expect = 2.1e-51, Sum P(4) = 2.1e-51
Identities = 30/95 (31%), Positives = 54/95 (56%)
Query: 149 LPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGC 208
LPR + + +S + + + IGG Q E+ + + L P+ F +G+ PP+G
Sbjct: 185 LPRGLGAVSDTISPRE-SHVKFEHIGGADRQFLEVCR-LAMHLKRPKTFATLGVDPPRGF 242
Query: 209 LLYGPPGTGKTLLARAVASQLDANFLKVVSSLFVT 243
+++GPPG GKT+ A+AVA +L L++ ++ V+
Sbjct: 243 IVHGPPGCGKTMFAQAVAGELAIPMLQLAATELVS 277
Score = 136 (52.9 bits), Expect = 5.5e-28, Sum P(2) = 5.5e-28
Identities = 31/71 (43%), Positives = 44/71 (61%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGIT-PPKGCLLYGPPGTGKTLLARAV 225
D+++ IG L E ++L I P+ + F +GI P+G LL GPPG GKTLLA+AV
Sbjct: 529 DVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAV 588
Query: 226 ASQLDANFLKV 236
A++ NF+ V
Sbjct: 589 ANETGMNFISV 599
Score = 105 (42.0 bits), Expect = 2.1e-51, Sum P(4) = 2.1e-51
Identities = 23/67 (34%), Positives = 42/67 (62%)
Query: 273 SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM- 331
++ +V GE+ IR +F+ A+ + PCI+ +D+IDAI RR +A RE++R ++
Sbjct: 272 ATELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIAPRR----ETAQREMERRVVS 327
Query: 332 ELLNQMD 338
+L + +D
Sbjct: 328 QLCSSLD 334
Score = 105 (42.0 bits), Expect = 2.1e-51, Sum P(4) = 2.1e-51
Identities = 28/86 (32%), Positives = 45/86 (52%)
Query: 346 VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYE 405
V +I T+RPD +D L R GR + +I + +P+E AR I + G++ +
Sbjct: 371 VLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILEKIC----KVNLAGDVTLK 426
Query: 406 AVVKLSDSFNGADLRNVCTEAGLFAI 431
+ KL+ + GADL+ + EA AI
Sbjct: 427 QIAKLTPGYVGADLQALIREAAKVAI 452
Score = 98 (39.6 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 630 VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGEIGDAATK 689
V +I T+RPD +D L R GR + +I + +P+E AR +IL+ I K GD K
Sbjct: 371 VLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILE----KICKVNLAGDVTLK 426
Query: 690 WVLPFTAG 697
+ T G
Sbjct: 427 QIAKLTPG 434
Score = 37 (18.1 bits), Expect = 1.6e-27, Sum P(2) = 1.6e-27
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 484 MKAVRKVSDNKKLESKLDYKPVIELPLL 511
++ V K +++K+E K V E+P++
Sbjct: 65 IQLVAKEENDEKMEEKEAMDDVQEIPIV 92
>UNIPROTKB|E2RM61 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074947
EMBL:AAEX03006359 ProteinModelPortal:E2RM61 PRIDE:E2RM61
Ensembl:ENSCAFT00000020231 OMA:DSNCELQ NextBio:20855489
Uniprot:E2RM61
Length = 251
Score = 414 (150.8 bits), Expect = 5.3e-38, P = 5.3e-38
Identities = 77/133 (57%), Positives = 100/133 (75%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ K VIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++V S +
Sbjct: 111 EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 170
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V K+IGE AR++RE+F AR H P IIFMDEID+IG R G+ D E+QRT++ELLNQ
Sbjct: 171 VQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQ 230
Query: 621 MDGFDSLGQVKMI 633
+DGF++ +K++
Sbjct: 231 LDGFEATKNIKVM 243
Score = 318 (117.0 bits), Expect = 2.8e-51, Sum P(2) = 2.8e-51
Identities = 72/151 (47%), Positives = 94/151 (62%)
Query: 92 VGQVSLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPR 151
VG+V + K V+VK ++VV + +D + RVAL + T+ + LP
Sbjct: 24 VGEVVRAMDKKK---VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPN 80
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
+VDPLV M E D TY IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLY
Sbjct: 81 KVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLY 140
Query: 212 GPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
GPPGTGKTLLARAVA D F++V S V
Sbjct: 141 GPPGTGKTLLARAVAHHTDCTFIRVSGSELV 171
Score = 250 (93.1 bits), Expect = 2.8e-51, Sum P(2) = 2.8e-51
Identities = 46/94 (48%), Positives = 64/94 (68%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH + T+ S +V K+IGE AR++RE+F AR H P IIFMDEID+IG R
Sbjct: 150 LARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 209
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMI 349
G+ D E+QRT++ELLNQ+DGF++ +K++
Sbjct: 210 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVM 243
>UNIPROTKB|G4ML45 [details] [associations]
symbol:MGG_06686 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001231 KO:K14571
RefSeq:XP_003709393.1 ProteinModelPortal:G4ML45
EnsemblFungi:MGG_06686T0 GeneID:2684859 KEGG:mgr:MGG_06686
Uniprot:G4ML45
Length = 770
Score = 348 (127.6 bits), Expect = 3.7e-50, Sum P(3) = 3.7e-50
Identities = 75/199 (37%), Positives = 117/199 (58%)
Query: 494 KKLESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFL 553
+ + KL+Y +++ P+ PE F +GI P G LL+GPPG GKTL+A+AVA+ ANF+
Sbjct: 511 QNVRKKLEYA-IVQ-PIERPEKFAALGIKPSAGILLWGPPGCGKTLVAKAVANASKANFI 568
Query: 554 KVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDA-IGGRRFSEGTSADREIQR 612
+ +++KY+GES +R++F+ A++ PCI+F DE+DA + R F+ + R +
Sbjct: 569 SIKGPELLNKYVGESEYNVRQLFSRAKSSAPCILFFDELDALVPTRDFTMSGATSRVVNA 628
Query: 613 TLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKI 672
LL ++DG + +I ATNRPD++D A+ RPGRL I + LP + R +IL+
Sbjct: 629 ----LLTELDGVGDRQGIYVIGATNRPDSIDEAIRRPGRLGTDIYVGLPTPEDRFDILRT 684
Query: 673 HAGPIAKHGEIGDAATKWV 691
G DA K +
Sbjct: 685 IYETTVPGGRAPDAVRKTI 703
Score = 261 (96.9 bits), Expect = 7.8e-19, P = 7.8e-19
Identities = 61/170 (35%), Positives = 102/170 (60%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
KP++ LPL E + R+G P LL+GP GTGKT + RA+A L F+ V ++++V
Sbjct: 211 KPLV-LPLRMGEEYARMGHKPQAAILLHGPSGTGKTAVVRALADTLQCAFVPVSATSLVS 269
Query: 563 KYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 622
GES + IRE F+ A PC++F+DE+D + G+ + + + + + L+++
Sbjct: 270 GISGESEKNIREAFDEAIRLAPCLLFLDEVDVVAGKMDGAQKAMEVRMSSEISQGLDKIV 329
Query: 623 GFDSLGQ-VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
S G+ V +I ATNRPD+++P + R R +++E+ +P+E AR IL+
Sbjct: 330 RCTSPGRNVVVIAATNRPDSIEPTVRR--RF-QELEMSMPDEAARESILR 376
Score = 234 (87.4 bits), Expect = 8.3e-28, Sum P(2) = 8.3e-28
Identities = 66/214 (30%), Positives = 110/214 (51%)
Query: 253 GNQLKRRSTHHLEKTYF-PFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDA- 310
G L ++ + K F +++KY+GES +R++F+ A++ PCI+F DE+DA
Sbjct: 551 GKTLVAKAVANASKANFISIKGPELLNKYVGESEYNVRQLFSRAKSSAPCILFFDELDAL 610
Query: 311 IGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDR 370
+ R F+ + R + LL ++DG + +I ATNRPD++D A+ RPGRL
Sbjct: 611 VPTRDFTMSGATSRVVNA----LLTELDGVGDRQGIYVIGATNRPDSIDEAIRRPGRLGT 666
Query: 371 KIEIPLPNEQAR---LAHTWPISIHAG--PIAKHGEIDYEAVVKLSDSFNGADLRNVCT- 424
I + LP + R L + ++ G P A I+ A F GADLR + T
Sbjct: 667 DIYVGLPTPEDRFDILRTIYETTVPGGRAPDAVRKTIERVARDPRCGKFTGADLRQLLTA 726
Query: 425 --EAGLFAIRS-EREYVTQEDFMKAVRKVSDNKK 455
EA + ++ E +++ED+ +A+ +V + K
Sbjct: 727 ASEACMIRVQDDEAPMISEEDWERALDEVKPSVK 760
Score = 174 (66.3 bits), Expect = 3.7e-50, Sum P(3) = 3.7e-50
Identities = 44/157 (28%), Positives = 89/157 (56%)
Query: 264 LEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSAD 323
L+ + P ++++V GES + IRE F+ A PC++F+DE+D + G+ + +
Sbjct: 255 LQCAFVPVSATSLVSGISGESEKNIREAFDEAIRLAPCLLFLDEVDVVAGKMDGAQKAME 314
Query: 324 REIQRTLMELLNQMDGFDSLGQ-VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQAR 382
+ + + L+++ S G+ V +I ATNRPD+++P + R R +++E+ +P+E AR
Sbjct: 315 VRMSSEISQGLDKIVRCTSPGRNVVVIAATNRPDSIEPTVRR--RF-QELEMSMPDEAAR 371
Query: 383 LAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADL 419
+ ++ + ++D+ A+ +L+ + GADL
Sbjct: 372 ESILRTMTRNK---RLSDDVDFTALARLTPGYVGADL 405
Score = 163 (62.4 bits), Expect = 8.3e-28, Sum P(2) = 8.3e-28
Identities = 59/228 (25%), Positives = 95/228 (41%)
Query: 9 VRHKTLQDYRKKLTEHAEVEGRLREMREQLKELTKQYDKSENDLKALQSVGQHDLLLHCV 68
VR + Q+ + + A E LR M K L+ D + VG DL
Sbjct: 354 VRRR-FQELEMSMPDEAARESILRTMTRN-KRLSDDVDFTALARLTPGYVGA-DLATAVD 410
Query: 69 REQLKELTKQYDKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRRQLDKA 128
+ + Y + L A + G S+ + WT+ ++ P + QLD+
Sbjct: 411 FAASEAMMAVYTAKISRLTAAVATGSPSVVDRIRLPWTLPAESNEAPP-IDNQEMQLDQ- 468
Query: 129 KLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIE 188
+ + + T ++ + P + T+S +G L ++L I
Sbjct: 469 ---NDEDICI---TFAHLKQAIARIQPAAKREGFSTVPNTTWSEVGALQNVRKKLEYAIV 522
Query: 189 LPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 236
P+ PE F +GI P G LL+GPPG GKTL+A+AVA+ ANF+ +
Sbjct: 523 QPIERPEKFAALGIKPSAGILLWGPPGCGKTLVAKAVANASKANFISI 570
Score = 124 (48.7 bits), Expect = 3.7e-50, Sum P(3) = 3.7e-50
Identities = 27/71 (38%), Positives = 42/71 (59%)
Query: 173 IGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDAN 232
+GG+S+ + L + + LPL E + R+G P LL+GP GTGKT + RA+A L
Sbjct: 199 MGGISQILEALEKPLVLPLRMGEEYARMGHKPQAAILLHGPSGTGKTAVVRALADTLQCA 258
Query: 233 FLKVVSSLFVT 243
F+ V ++ V+
Sbjct: 259 FVPVSATSLVS 269
>UNIPROTKB|J3QQM1 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AC015651 ChiTaRS:PSMC5
HGNC:HGNC:9552 Ensembl:ENST00000582130 Uniprot:J3QQM1
Length = 263
Score = 398 (145.2 bits), Expect = 2.0e-38, Sum P(2) = 2.0e-38
Identities = 75/123 (60%), Positives = 93/123 (75%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ K VIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++V S +
Sbjct: 141 EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 200
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 620
V K+IGE AR++RE+F AR H P IIFMDEID+IG R G+ D E+QRT++ELLNQ
Sbjct: 201 VQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQ 260
Query: 621 MDG 623
+DG
Sbjct: 261 LDG 263
Score = 311 (114.5 bits), Expect = 7.7e-49, Sum P(2) = 7.7e-49
Identities = 77/167 (46%), Positives = 98/167 (58%)
Query: 80 DKSENDLKALQSVGQVSLSTSVSKCWTVIVKATNGPRYVVGCRRQLDK----AKLKSGTR 135
DKS+N L+ LQ+ L+ V + YV R +DK K+ R
Sbjct: 37 DKSQN-LRRLQAQRN-ELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVTPNCR 94
Query: 136 VALDMTTLTIMRYLPREVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPE 195
VAL + T+ + LP +VDPLV M E D TY IGGL +QI+E++EVIELP+ +PE
Sbjct: 95 VALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 154
Query: 196 LFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLFV 242
LF+ +GI PKG LLYGPPGTGKTLLARAVA D F++V S V
Sbjct: 155 LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 201
Score = 234 (87.4 bits), Expect = 7.7e-49, Sum P(2) = 7.7e-49
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH + T+ S +V K+IGE AR++RE+F AR H P IIFMDEID+IG R
Sbjct: 180 LARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 239
Query: 316 FSEGTSADREIQRTLMELLNQMDG 339
G+ D E+QRT++ELLNQ+DG
Sbjct: 240 LEGGSGGDSEVQRTMLELLNQLDG 263
Score = 44 (20.5 bits), Expect = 2.0e-38, Sum P(2) = 2.0e-38
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 15 QDYRKKLTEHAEVEGRLREMREQLKELTKQ 44
Q+ R+ + E+ ++R +RE+L+ L +Q
Sbjct: 40 QNLRRLQAQRNELNAKVRLLREELQLLQEQ 69
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 430 (156.4 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 87/186 (46%), Positives = 126/186 (67%)
Query: 497 ESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 556
E +L + IE PLL+ + FQR+GI PP+G L++GPPG KT++A+A+A++ NFL +
Sbjct: 542 ELRLAMQQAIEWPLLHADKFQRLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIK 601
Query: 557 SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS-EGTSADREI-QRTL 614
+ ++GES R +RE+F AR P I+F DEIDAIGG R +G+S+ + +R L
Sbjct: 602 GPELFSMWVGESERAVREVFRKARQVAPAIVFFDEIDAIGGERSEGDGSSSGSSVKERVL 661
Query: 615 MELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKI-- 672
+LL ++DG ++L V ++ ATNRPD +D ALLRPGR+DR + + LP +AR EILKI
Sbjct: 662 TQLLTELDGVEALQNVTIVAATNRPDMIDKALLRPGRIDRILYVGLPQCEARREILKIKL 721
Query: 673 HAGPIA 678
A PI+
Sbjct: 722 RAMPIS 727
Score = 335 (123.0 bits), Expect = 2.0e-40, Sum P(2) = 2.0e-40
Identities = 74/175 (42%), Positives = 112/175 (64%)
Query: 280 YIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFS-EGTSADREI-QRTLMELLNQM 337
++GES R +RE+F AR P I+F DEIDAIGG R +G+S+ + +R L +LL ++
Sbjct: 609 WVGESERAVREVFRKARQVAPAIVFFDEIDAIGGERSEGDGSSSGSSVKERVLTQLLTEL 668
Query: 338 DGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIA 397
DG ++L V ++ ATNRPD +D ALLRPGR+DR + + LP +AR I + A PI+
Sbjct: 669 DGVEALQNVTIVAATNRPDMIDKALLRPGRIDRILYVGLPQCEAR-REILKIKLRAMPIS 727
Query: 398 KHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRS--EREYVTQEDFMKAVRKV 450
++D E +V+L++ ++GA+++ VC EA L A+ E E V DF A++ V
Sbjct: 728 N--DVDMEKLVQLTEGYSGAEIQAVCHEAALRALEQSFEAEDVKWTDFEHALKAV 780
Score = 199 (75.1 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 51/188 (27%), Positives = 98/188 (52%)
Query: 520 GITPPKGCLLYGPPGTGKTLLARAVA------SQLDANFLKVVSSAIVDKYIGESARLIR 573
G+ +G LLYG G GK+++ A+ SQ +++ S + K++GE+ + +
Sbjct: 300 GLRVSRGLLLYGATGCGKSMVLEAMCAVAEERSQGHVQLIRINSGEVYSKFLGETEQKLG 359
Query: 574 EMFNYARNH--QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSL-GQV 630
+F A NH P ++ ++++ + ++ E + + + + LL+Q+ L G
Sbjct: 360 AIFERAYNHYPHPTLLLIEDVHNLCPKQ--ENSDLVKRVSLAFLSLLDQLSSPSQLKGSK 417
Query: 631 KMIMATNRP-DTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGEIGDAATK 689
++AT+ DTL P++ R GRLD ++E+ P+ QARLEI++ + +H ++ D +
Sbjct: 418 TFVLATSSQIDTLHPSIRRAGRLDNEVELGAPSSQARLEIVRCLIKSV-EH-QLSDEEVE 475
Query: 690 WVLPFTAG 697
V T G
Sbjct: 476 HVASITHG 483
Score = 177 (67.4 bits), Expect = 2.0e-40, Sum P(2) = 2.0e-40
Identities = 32/70 (45%), Positives = 51/70 (72%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++ +S IGG SE +++ IE PLL+ + FQR+GI PP+G L++GPPG KT++A+A+A
Sbjct: 531 NVQWSDIGGQSELRLAMQQAIEWPLLHADKFQRLGIKPPRGILMFGPPGCSKTMIAKALA 590
Query: 227 SQLDANFLKV 236
++ NFL +
Sbjct: 591 TESKLNFLSI 600
Score = 152 (58.6 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 45/178 (25%), Positives = 87/178 (48%)
Query: 257 KRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNH--QPCIIFMDEIDAIGGR 314
+ RS H++ S + K++GE+ + + +F A NH P ++ ++++ + +
Sbjct: 329 EERSQGHVQ--LIRINSGEVYSKFLGETEQKLGAIFERAYNHYPHPTLLLIEDVHNLCPK 386
Query: 315 RFSEGTSADREIQRTLMELLNQMDGFDSL-GQVKMIMATNRP-DTLDPALLRPGRLDRKI 372
+ E + + + + LL+Q+ L G ++AT+ DTL P++ R GRLD ++
Sbjct: 387 Q--ENSDLVKRVSLAFLSLLDQLSSPSQLKGSKTFVLATSSQIDTLHPSIRRAGRLDNEV 444
Query: 373 EIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFA 430
E+ P+ QARL + E+++ V ++ + GADL N+ A L A
Sbjct: 445 ELGAPSSQARLEIVRCLIKSVEHQLSDEEVEH--VASITHGYVGADLANLVYAAMLQA 500
Score = 81 (33.6 bits), Expect = 3.1e-41, Sum P(2) = 3.1e-41
Identities = 27/101 (26%), Positives = 48/101 (47%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
IT IGGL Q++ + E +E L L G+ +G LLYG G GK+++ A+ +
Sbjct: 269 ITKCQIGGLDRQLQLVEESMEYALGFRTL--PAGLRVSRGLLLYGATGCGKSMVLEAMCA 326
Query: 228 QLDANFLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTY 268
+ V + + S E + +G + +++ E+ Y
Sbjct: 327 VAEERSQGHVQLIRINSGEVYSKFLG-ETEQKLGAIFERAY 366
>GENEDB_PFALCIPARUM|PF14_0126 [details] [associations]
symbol:PF14_0126 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 379 (138.5 bits), Expect = 2.9e-47, Sum P(2) = 2.9e-47
Identities = 75/157 (47%), Positives = 100/157 (63%)
Query: 515 LFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIRE 574
++ + I PKG LLYGPPG KTL A+A+AS++ NF+ V I KY+GES + IR
Sbjct: 860 IYDKYNIESPKGILLYGPPGCSKTLFAKAIASEIHMNFISVKGPEIFSKYVGESEKSIRN 919
Query: 575 MFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIM 634
+F AR + PC+IF DEID+I R + R L +LLN++DG + V ++
Sbjct: 920 IFKKARENHPCVIFFDEIDSIAVNRNNNQNFVSN---RVLCQLLNEIDGIKNRLNVIILA 976
Query: 635 ATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
ATNRPD +DPAL+RPGR DR I +PLPN +R ILK
Sbjct: 977 ATNRPDLIDPALMRPGRFDRIIYVPLPNYSSRFAILK 1013
Score = 257 (95.5 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 58/148 (39%), Positives = 84/148 (56%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
I KY+GES + IR +F AR + PC+IF DEID+I R + R L +LLN
Sbjct: 905 IFSKYVGESEKSIRNIFKKARENHPCVIFFDEIDSIAVNRNNNQNFVSN---RVLCQLLN 961
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
++DG + V ++ ATNRPD +DPAL+RPGR DR I +PLPN +R A + +
Sbjct: 962 EIDGIKNRLNVIILAATNRPDLIDPALMRPGRFDRIIYVPLPNYSSRFAI---LKKNLKF 1018
Query: 396 IAKHGEIDYEAVVKLSDSFNGADLRNVC 423
H I+Y+ ++D N +++ C
Sbjct: 1019 FKIHNLIEYDKKETIND-LNHNEIKREC 1045
Score = 202 (76.2 bits), Expect = 2.9e-47, Sum P(2) = 2.9e-47
Identities = 81/298 (27%), Positives = 142/298 (47%)
Query: 173 IGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDAN 232
+GG ++ ++ I +PL+ ++ I KG LL+GPPG GKT +A + +L +
Sbjct: 426 LGGYNKIKEDIYYYILIPLIYKHIYDAYHIDIHKGILLHGPPGCGKTYIALLIKEEL--S 483
Query: 233 FLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYF-P----FYSSAIVDKYIGESARL 287
LK F T ++ N K + ++ + P S+ ++D Y +
Sbjct: 484 LLK---KKFCTITQNKTSKQLNNTKNDNNYNNDDNIIIPEIEILKSTDLID-Y-NNTGYK 538
Query: 288 IREMF-----NYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDS 342
I E+F Y ++ IIF+DEI+ + +R E + + I ++ LLN MDG
Sbjct: 539 INELFLRCHKRYQEENKCTIIFIDEIEILCKKR-EENNNMN--IYTSV--LLNNMDGIKK 593
Query: 343 LGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEI 402
+I ATN + +D AL R GR D++IE+ LPN + R++ + ++ + KH I
Sbjct: 594 HTHTILIGATNYINKIDLALRRSGRFDKEIEVNLPNLKDRIS-IFQKKLN---LIKHN-I 648
Query: 403 DYEAVVKLSD---SFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKA-VRKVSDNKKL 456
+ + KL+D SF +D+ N +F E + ++++ F A V + D +
Sbjct: 649 GKKKIHKLADLCQSFTCSDI-NSLINISMFLNLKENKIISRDIFKTANVHTIDDTNDI 705
Score = 139 (54.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 42/146 (28%), Positives = 66/146 (45%)
Query: 170 YSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL 229
+ IGG R + E + P ++ + I PKG LLYGPPG KTL A+A+AS++
Sbjct: 834 FKDIGGYKFVKRCINECLIYPKKYKNIYDKYNIESPKGILLYGPPGCSKTLFAKAIASEI 893
Query: 230 DANFLKVVS-SLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLI 288
NF+ V +F + + N K+ +H +F S V++ +
Sbjct: 894 HMNFISVKGPEIFSKYVGESEKSIRNIFKKARENHPCVIFFDEIDSIAVNRNNNQ----- 948
Query: 289 REMFNYARNHQPCIIFMDEIDAIGGR 314
N+ N C + ++EID I R
Sbjct: 949 ----NFVSNRVLCQL-LNEIDGIKNR 969
Score = 124 (48.7 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 39/107 (36%), Positives = 58/107 (54%)
Query: 578 YARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATN 637
Y ++ IIF+DEI+ + +R E + + I ++ LLN MDG +I ATN
Sbjct: 550 YQEENKCTIIFIDEIEILCKKR-EENNNMN--IYTSV--LLNNMDGIKKHTHTILIGATN 604
Query: 638 RPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGEIG 684
+ +D AL R GR D++IE+ LPN + R+ I + I KH IG
Sbjct: 605 YINKIDLALRRSGRFDKEIEVNLPNLKDRISIFQKKLNLI-KHN-IG 649
Score = 96 (38.9 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 32/121 (26%), Positives = 55/121 (45%)
Query: 475 REYVTQEDFMKAVRKVSDNKKLESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPG 534
++ V + K + K+ K++ + Y I +PL+ ++ I KG LL+GPPG
Sbjct: 411 KKMVVNKKEKKGLNKLGGYNKIKEDIYY--YILIPLIYKHIYDAYHIDIHKGILLHGPPG 468
Query: 535 TGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDA 594
GKT +A + +L + LK I + + NY N+ II + EI+
Sbjct: 469 CGKTYIALLIKEEL--SLLKKKFCTITQNKTSKQLNNTKNDNNY--NNDDNII-IPEIEI 523
Query: 595 I 595
+
Sbjct: 524 L 524
Score = 62 (26.9 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 19/98 (19%), Positives = 49/98 (50%)
Query: 407 VVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSY-RTE 465
+ K + ++GA++ N+C EA + A+R + + K K+ +N+ + N+ +E
Sbjct: 1113 LAKKTKKYSGAEIVNICREASICALRQTLKKRNIKINPKIKIKIKNNETNNTQNNIAHSE 1172
Query: 466 AGLFAIRSEREY-VTQEDFMKAVRKVSDNKKLESKLDY 502
+ E ++++ F++ ++K+ ES +++
Sbjct: 1173 KNKYPFDKEPLIGLSKKHFLRVLKKIKPQTS-ESLINF 1209
>UNIPROTKB|Q8ILW7 [details] [associations]
symbol:PF14_0126 "AAA family ATPase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 379 (138.5 bits), Expect = 2.9e-47, Sum P(2) = 2.9e-47
Identities = 75/157 (47%), Positives = 100/157 (63%)
Query: 515 LFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIRE 574
++ + I PKG LLYGPPG KTL A+A+AS++ NF+ V I KY+GES + IR
Sbjct: 860 IYDKYNIESPKGILLYGPPGCSKTLFAKAIASEIHMNFISVKGPEIFSKYVGESEKSIRN 919
Query: 575 MFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIM 634
+F AR + PC+IF DEID+I R + R L +LLN++DG + V ++
Sbjct: 920 IFKKARENHPCVIFFDEIDSIAVNRNNNQNFVSN---RVLCQLLNEIDGIKNRLNVIILA 976
Query: 635 ATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
ATNRPD +DPAL+RPGR DR I +PLPN +R ILK
Sbjct: 977 ATNRPDLIDPALMRPGRFDRIIYVPLPNYSSRFAILK 1013
Score = 257 (95.5 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 58/148 (39%), Positives = 84/148 (56%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
I KY+GES + IR +F AR + PC+IF DEID+I R + R L +LLN
Sbjct: 905 IFSKYVGESEKSIRNIFKKARENHPCVIFFDEIDSIAVNRNNNQNFVSN---RVLCQLLN 961
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
++DG + V ++ ATNRPD +DPAL+RPGR DR I +PLPN +R A + +
Sbjct: 962 EIDGIKNRLNVIILAATNRPDLIDPALMRPGRFDRIIYVPLPNYSSRFAI---LKKNLKF 1018
Query: 396 IAKHGEIDYEAVVKLSDSFNGADLRNVC 423
H I+Y+ ++D N +++ C
Sbjct: 1019 FKIHNLIEYDKKETIND-LNHNEIKREC 1045
Score = 202 (76.2 bits), Expect = 2.9e-47, Sum P(2) = 2.9e-47
Identities = 81/298 (27%), Positives = 142/298 (47%)
Query: 173 IGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDAN 232
+GG ++ ++ I +PL+ ++ I KG LL+GPPG GKT +A + +L +
Sbjct: 426 LGGYNKIKEDIYYYILIPLIYKHIYDAYHIDIHKGILLHGPPGCGKTYIALLIKEEL--S 483
Query: 233 FLKVVSSLFVTSKEDMAILMGNQLKRRSTHHLEKTYF-P----FYSSAIVDKYIGESARL 287
LK F T ++ N K + ++ + P S+ ++D Y +
Sbjct: 484 LLK---KKFCTITQNKTSKQLNNTKNDNNYNNDDNIIIPEIEILKSTDLID-Y-NNTGYK 538
Query: 288 IREMF-----NYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDS 342
I E+F Y ++ IIF+DEI+ + +R E + + I ++ LLN MDG
Sbjct: 539 INELFLRCHKRYQEENKCTIIFIDEIEILCKKR-EENNNMN--IYTSV--LLNNMDGIKK 593
Query: 343 LGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEI 402
+I ATN + +D AL R GR D++IE+ LPN + R++ + ++ + KH I
Sbjct: 594 HTHTILIGATNYINKIDLALRRSGRFDKEIEVNLPNLKDRIS-IFQKKLN---LIKHN-I 648
Query: 403 DYEAVVKLSD---SFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKA-VRKVSDNKKL 456
+ + KL+D SF +D+ N +F E + ++++ F A V + D +
Sbjct: 649 GKKKIHKLADLCQSFTCSDI-NSLINISMFLNLKENKIISRDIFKTANVHTIDDTNDI 705
Score = 139 (54.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 42/146 (28%), Positives = 66/146 (45%)
Query: 170 YSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL 229
+ IGG R + E + P ++ + I PKG LLYGPPG KTL A+A+AS++
Sbjct: 834 FKDIGGYKFVKRCINECLIYPKKYKNIYDKYNIESPKGILLYGPPGCSKTLFAKAIASEI 893
Query: 230 DANFLKVVS-SLFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESARLI 288
NF+ V +F + + N K+ +H +F S V++ +
Sbjct: 894 HMNFISVKGPEIFSKYVGESEKSIRNIFKKARENHPCVIFFDEIDSIAVNRNNNQ----- 948
Query: 289 REMFNYARNHQPCIIFMDEIDAIGGR 314
N+ N C + ++EID I R
Sbjct: 949 ----NFVSNRVLCQL-LNEIDGIKNR 969
Score = 124 (48.7 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 39/107 (36%), Positives = 58/107 (54%)
Query: 578 YARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATN 637
Y ++ IIF+DEI+ + +R E + + I ++ LLN MDG +I ATN
Sbjct: 550 YQEENKCTIIFIDEIEILCKKR-EENNNMN--IYTSV--LLNNMDGIKKHTHTILIGATN 604
Query: 638 RPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHGEIG 684
+ +D AL R GR D++IE+ LPN + R+ I + I KH IG
Sbjct: 605 YINKIDLALRRSGRFDKEIEVNLPNLKDRISIFQKKLNLI-KHN-IG 649
Score = 96 (38.9 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 32/121 (26%), Positives = 55/121 (45%)
Query: 475 REYVTQEDFMKAVRKVSDNKKLESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPG 534
++ V + K + K+ K++ + Y I +PL+ ++ I KG LL+GPPG
Sbjct: 411 KKMVVNKKEKKGLNKLGGYNKIKEDIYY--YILIPLIYKHIYDAYHIDIHKGILLHGPPG 468
Query: 535 TGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDA 594
GKT +A + +L + LK I + + NY N+ II + EI+
Sbjct: 469 CGKTYIALLIKEEL--SLLKKKFCTITQNKTSKQLNNTKNDNNY--NNDDNII-IPEIEI 523
Query: 595 I 595
+
Sbjct: 524 L 524
Score = 62 (26.9 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 19/98 (19%), Positives = 49/98 (50%)
Query: 407 VVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSY-RTE 465
+ K + ++GA++ N+C EA + A+R + + K K+ +N+ + N+ +E
Sbjct: 1113 LAKKTKKYSGAEIVNICREASICALRQTLKKRNIKINPKIKIKIKNNETNNTQNNIAHSE 1172
Query: 466 AGLFAIRSEREY-VTQEDFMKAVRKVSDNKKLESKLDY 502
+ E ++++ F++ ++K+ ES +++
Sbjct: 1173 KNKYPFDKEPLIGLSKKHFLRVLKKIKPQTS-ESLINF 1209
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 398 (145.2 bits), Expect = 3.8e-46, Sum P(2) = 3.8e-46
Identities = 109/316 (34%), Positives = 164/316 (51%)
Query: 368 LDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTE-- 425
L RK+ +P + LAH P + A +A E AV ++ +N E
Sbjct: 330 LCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMEDL 389
Query: 426 --AGLFAIR--SEREYVTQEDFMKAVRKVSDNKKL--DHCNSYRTEAGLF--AIRSEREY 477
G+ R +E TQ++ + + + D L + E F A+ S +
Sbjct: 390 PSKGVQEERLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPS 449
Query: 478 VTQEDFMKAVRKV-SDNKKLES-KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGT 535
+E F+ +D LE + + I P+ NP+ F+ +G+ P G LL GPPG
Sbjct: 450 AKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGC 509
Query: 536 GKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI 595
GKTLLA+AVA++ NF+ V +++ Y+GES R +R++F A+N PC+IF DE+DA+
Sbjct: 510 GKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDAL 569
Query: 596 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 655
RR T A R + +LL +MDG ++ QV ++ ATNRPD +DPA+LRPGRLD+
Sbjct: 570 CPRRSDRETGAS---VRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKT 626
Query: 656 IEIPLPNEQARLEILK 671
+ + LP RL ILK
Sbjct: 627 LFVGLPPPADRLAILK 642
Score = 374 (136.7 bits), Expect = 2.8e-31, P = 2.8e-31
Identities = 99/252 (39%), Positives = 145/252 (57%)
Query: 433 SEREYVTQEDFMKAVRKVSDNK---KLDHCNSYRTEAGLFAIRSEREYVTQEDFM-KAVR 488
S +Y +D + SD K KL + S R + L + E E V Q+ + +
Sbjct: 80 SMEDYPDPQDSKDSSLLESDMKRKGKLKNKGSKRKKEDLQEVDGEIEAVLQKKAKARGLE 139
Query: 489 KVSDNKKLE----SKLDYKPVIEL--PLLNPELFQRVGITPPKGCLLYGPPGTGKTLLAR 542
N K E + + K V ++ + +PE++ +G+ PP+G LL+GPPG GKTLLA
Sbjct: 140 FQISNVKFEDVGGNDMTLKEVCKMLIHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAH 199
Query: 543 AVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSE 602
A+A +LD LKV + IV GES + +RE+F A ++ PCIIF+DEIDAI +R E
Sbjct: 200 AIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKR--E 257
Query: 603 GTSADREIQRTLMELLNQMDGFDSLG---QVKMIMATNRPDTLDPALLRPGRLDRKIEIP 659
S D E +R + +LL MD +++ +V +I ATNRPD+LDPAL R GR DR+I +
Sbjct: 258 VASKDME-RRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLG 316
Query: 660 LPNEQARLEILK 671
+P+E +R IL+
Sbjct: 317 IPDEASRERILQ 328
Score = 289 (106.8 bits), Expect = 9.4e-34, Sum P(2) = 9.4e-34
Identities = 63/161 (39%), Positives = 96/161 (59%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
+++ Y+GES R +R++F A+N PC+IF DE+DA+ RR T A R + +LL
Sbjct: 534 LLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGAS---VRVVNQLLT 590
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
+MDG ++ QV ++ ATNRPD +DPA+LRPGRLD+ + + LP RLA I+ +
Sbjct: 591 EMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTK 650
Query: 396 IAKHGEIDYEAVVK--LSDSFNGADLRNVCTEAGLFAIRSE 434
+++ EA+ D + GADL + EA + A+R E
Sbjct: 651 PPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQE 691
Score = 240 (89.5 bits), Expect = 2.6e-28, Sum P(2) = 2.6e-28
Identities = 66/161 (40%), Positives = 95/161 (59%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
IV GES + +RE+F A ++ PCIIF+DEIDAI +R E S D E +R + +LL
Sbjct: 217 IVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKR--EVASKDME-RRIVAQLLT 273
Query: 336 QMDGFDSLG---QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQAR--LAHTWPIS 390
MD +++ +V +I ATNRPD+LDPAL R GR DR+I + +P+E +R + T
Sbjct: 274 CMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRK 333
Query: 391 IHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI 431
+ P A D+ + L+ F GADL +C EA + A+
Sbjct: 334 LRL-PQA----FDFCHLAHLTPGFVGADLMALCREAAMCAV 369
Score = 161 (61.7 bits), Expect = 3.8e-46, Sum P(2) = 3.8e-46
Identities = 29/77 (37%), Positives = 52/77 (67%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++ + +GG ++E+ +++ + + +PE++ +G+ PP+G LL+GPPG GKTLLA A+A
Sbjct: 144 NVKFEDVGGNDMTLKEVCKML-IHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIA 202
Query: 227 SQLDANFLKVVSSLFVT 243
+LD LKV + V+
Sbjct: 203 GELDLPILKVAAPEIVS 219
Score = 160 (61.4 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 32/70 (45%), Positives = 46/70 (65%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++T++ IG L + EL I P+ NP+ F+ +G+ P G LL GPPG GKTLLA+AVA
Sbjct: 460 NVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVA 519
Query: 227 SQLDANFLKV 236
++ NF+ V
Sbjct: 520 NESGLNFISV 529
Score = 40 (19.1 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 305 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKM 348
M+++ + G + GT E Q L LL + D L + +M
Sbjct: 386 MEDLPSKGVQEERLGTEPTSETQDELQRLLGLLRDQDPLSEEQM 429
>UNIPROTKB|E9PKD5 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC090559 HGNC:HGNC:9549 ChiTaRS:PSMC3
IPI:IPI00978735 ProteinModelPortal:E9PKD5 SMR:E9PKD5 PRIDE:E9PKD5
Ensembl:ENST00000524447 ArrayExpress:E9PKD5 Bgee:E9PKD5
Uniprot:E9PKD5
Length = 294
Score = 448 (162.8 bits), Expect = 6.5e-46, Sum P(2) = 6.5e-46
Identities = 87/149 (58%), Positives = 110/149 (73%)
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FLK+ +V +I
Sbjct: 146 IVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFI 205
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 625
G+ A+L+R+ F A+ P IIF+DE+DAIG +RF + DRE+QRT++ELLNQ+DGF
Sbjct: 206 GDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 265
Query: 626 SLGQVKMIMATNRPDTLDPALLRPGRLDR 654
QVK+I ATNR D LDPALLR GRLDR
Sbjct: 266 PNTQVKVIAATNRVDILDPALLRSGRLDR 294
Score = 291 (107.5 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 58/115 (50%), Positives = 76/115 (66%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R + T+ +V +IG+ A+L+R+ F A+ P IIF+DE+DAIG +R
Sbjct: 180 LARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKR 239
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDR 370
F + DRE+QRT++ELLNQ+DGF QVK+I ATNR D LDPALLR GRLDR
Sbjct: 240 FDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDR 294
Score = 177 (67.4 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 36/61 (59%), Positives = 43/61 (70%)
Query: 182 ELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSLF 241
EL E I LP+ + E F+ +GI PPKG L+YGPPGTGKTLLARA A+Q A FLK+
Sbjct: 141 ELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQL 200
Query: 242 V 242
V
Sbjct: 201 V 201
Score = 62 (26.9 bits), Expect = 6.5e-46, Sum P(2) = 6.5e-46
Identities = 28/136 (20%), Positives = 58/136 (42%)
Query: 27 VEGRLREMREQLKELTKQYDKSENDLKA-LQSVGQHDLLLHCVREQLKELTKQYDKSEND 85
++ ++ M+ ++ +T + ++ +K + + + L + V ++ L D ND
Sbjct: 13 LDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELL----DVDPND 68
Query: 86 LKALQSVGQVSL-STSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLT 144
+ + + L S KC ++K + Y + +D KLK G V ++ +
Sbjct: 69 QE--EDGANIDLDSQRKGKC--AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYL 124
Query: 145 IMRYLPREVDPLVYNM 160
I+ LP E D V M
Sbjct: 125 ILETLPTEYDSRVKAM 140
>UNIPROTKB|O15381 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
EMBL:U68140 EMBL:U78772 EMBL:AK297396 EMBL:AK298244 EMBL:AC092809
EMBL:BC012105 IPI:IPI00006197 IPI:IPI00183080 IPI:IPI00185801
RefSeq:NP_001230075.1 RefSeq:NP_001230076.1 RefSeq:NP_002524.2
RefSeq:NP_996671.1 UniGene:Hs.497867 PDB:2X8A PDBsum:2X8A
ProteinModelPortal:O15381 SMR:O15381 IntAct:O15381
MINT:MINT-1423251 STRING:O15381 PhosphoSite:O15381
SWISS-2DPAGE:O15381 PaxDb:O15381 PRIDE:O15381 DNASU:4931
Ensembl:ENST00000281701 Ensembl:ENST00000340871
Ensembl:ENST00000391875 Ensembl:ENST00000469075 GeneID:4931
KEGG:hsa:4931 UCSC:uc001hok.3 CTD:4931 GeneCards:GC01M224416
HGNC:HGNC:8070 HPA:HPA028207 MIM:602426 neXtProt:NX_O15381
PharmGKB:PA31857 HOVERGEN:HBG001226 InParanoid:O15381 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN PhylomeDB:O15381 ChiTaRS:NVL
EvolutionaryTrace:O15381 GenomeRNAi:4931 NextBio:19001
ArrayExpress:O15381 Bgee:O15381 CleanEx:HS_NVL
Genevestigator:O15381 GermOnline:ENSG00000143748 Uniprot:O15381
Length = 856
Score = 398 (145.2 bits), Expect = 9.5e-46, Sum P(2) = 9.5e-46
Identities = 109/316 (34%), Positives = 164/316 (51%)
Query: 368 LDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTE-- 425
L RK+ +P + LAH P + A +A E AV ++ +N E
Sbjct: 447 LCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMEDL 506
Query: 426 --AGLFAIR--SEREYVTQEDFMKAVRKVSDNKKL--DHCNSYRTEAGLF--AIRSEREY 477
G+ R +E TQ++ + + + D L + E F A+ S +
Sbjct: 507 PSKGVQEERLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPS 566
Query: 478 VTQEDFMKAVRKV-SDNKKLES-KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGT 535
+E F+ +D LE + + I P+ NP+ F+ +G+ P G LL GPPG
Sbjct: 567 AKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGC 626
Query: 536 GKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI 595
GKTLLA+AVA++ NF+ V +++ Y+GES R +R++F A+N PC+IF DE+DA+
Sbjct: 627 GKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDAL 686
Query: 596 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 655
RR T A R + +LL +MDG ++ QV ++ ATNRPD +DPA+LRPGRLD+
Sbjct: 687 CPRRSDRETGAS---VRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKT 743
Query: 656 IEIPLPNEQARLEILK 671
+ + LP RL ILK
Sbjct: 744 LFVGLPPPADRLAILK 759
Score = 373 (136.4 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 117/330 (35%), Positives = 169/330 (51%)
Query: 361 ALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPI-----AKHGE----IDYEAVVKLS 411
+L R G D P ++ + T IS G I AK E ID VK
Sbjct: 125 SLYRKGNPDSVSNTPEMEQRETTSSTPRISSKTGSIPLKTPAKDSEGGWFIDKTPSVKKD 184
Query: 412 DSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAI 471
F + + I+ ++ E MK RK KL + S R + L +
Sbjct: 185 SFFLDLSCEKSNPKKPITEIQDSKDSSLLESDMK--RK----GKLKNKGSKRKKEDLQEV 238
Query: 472 RSEREYVTQEDFM-KAVRKVSDNKKLE----SKLDYKPVIEL--PLLNPELFQRVGITPP 524
E E V Q+ + + N K E + + K V ++ + +PE++ +G+ PP
Sbjct: 239 DGEIEAVLQKKAKARGLEFQISNVKFEDVGGNDMTLKEVCKMLIHMRHPEVYHHLGVVPP 298
Query: 525 KGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQP 584
+G LL+GPPG GKTLLA A+A +LD LKV + IV GES + +RE+F A ++ P
Sbjct: 299 RGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAP 358
Query: 585 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLG---QVKMIMATNRPDT 641
CIIF+DEIDAI +R E S D E +R + +LL MD +++ +V +I ATNRPD+
Sbjct: 359 CIIFIDEIDAITPKR--EVASKDME-RRIVAQLLTCMDDLNNVAATARVLVIGATNRPDS 415
Query: 642 LDPALLRPGRLDRKIEIPLPNEQARLEILK 671
LDPAL R GR DR+I + +P+E +R IL+
Sbjct: 416 LDPALRRAGRFDREICLGIPDEASRERILQ 445
Score = 289 (106.8 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
Identities = 63/161 (39%), Positives = 96/161 (59%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
+++ Y+GES R +R++F A+N PC+IF DE+DA+ RR T A R + +LL
Sbjct: 651 LLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGAS---VRVVNQLLT 707
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
+MDG ++ QV ++ ATNRPD +DPA+LRPGRLD+ + + LP RLA I+ +
Sbjct: 708 EMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTK 767
Query: 396 IAKHGEIDYEAVVK--LSDSFNGADLRNVCTEAGLFAIRSE 434
+++ EA+ D + GADL + EA + A+R E
Sbjct: 768 PPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQE 808
Score = 240 (89.5 bits), Expect = 4.2e-28, Sum P(2) = 4.2e-28
Identities = 66/161 (40%), Positives = 95/161 (59%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
IV GES + +RE+F A ++ PCIIF+DEIDAI +R E S D E +R + +LL
Sbjct: 334 IVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKR--EVASKDME-RRIVAQLLT 390
Query: 336 QMDGFDSLG---QVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQAR--LAHTWPIS 390
MD +++ +V +I ATNRPD+LDPAL R GR DR+I + +P+E +R + T
Sbjct: 391 CMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRK 450
Query: 391 IHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI 431
+ P A D+ + L+ F GADL +C EA + A+
Sbjct: 451 LRL-PQA----FDFCHLAHLTPGFVGADLMALCREAAMCAV 486
Score = 161 (61.7 bits), Expect = 9.5e-46, Sum P(2) = 9.5e-46
Identities = 29/77 (37%), Positives = 52/77 (67%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++ + +GG ++E+ +++ + + +PE++ +G+ PP+G LL+GPPG GKTLLA A+A
Sbjct: 261 NVKFEDVGGNDMTLKEVCKML-IHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIA 319
Query: 227 SQLDANFLKVVSSLFVT 243
+LD LKV + V+
Sbjct: 320 GELDLPILKVAAPEIVS 336
Score = 160 (61.4 bits), Expect = 2.1e-33, Sum P(2) = 2.1e-33
Identities = 32/70 (45%), Positives = 46/70 (65%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++T++ IG L + EL I P+ NP+ F+ +G+ P G LL GPPG GKTLLA+AVA
Sbjct: 577 NVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVA 636
Query: 227 SQLDANFLKV 236
++ NF+ V
Sbjct: 637 NESGLNFISV 646
Score = 40 (19.1 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 305 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKM 348
M+++ + G + GT E Q L LL + D L + +M
Sbjct: 503 MEDLPSKGVQEERLGTEPTSETQDELQRLLGLLRDQDPLSEEQM 546
>UNIPROTKB|F1MIM8 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016235 "aggresome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:DAAA02042637 EMBL:DAAA02042638
IPI:IPI00715498 Ensembl:ENSBTAT00000047473 Uniprot:F1MIM8
Length = 855
Score = 392 (143.0 bits), Expect = 4.6e-45, Sum P(2) = 4.6e-45
Identities = 111/316 (35%), Positives = 163/316 (51%)
Query: 368 LDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEA- 426
L RK+ +P LAH P + A +A E AV ++ G +N EA
Sbjct: 446 LCRKLRLPETFHFRHLAHLTPGFVGADLMALCREAAMCAVNRVLMELQGQHKKNPEIEAS 505
Query: 427 ---GLFAIRSEREYV--TQEDFMKAVRKVSDNKKL--DHCNSYRTEAGLF--AIRSEREY 477
G R+ E TQE+ + + + + L + E F A+ S +
Sbjct: 506 PSEGDQEERTGAEPTSKTQEELQRLLGLLRNQDPLSEEQLKGLCIELNDFIVALSSVQPS 565
Query: 478 VTQEDFMKAVRKV-SDNKKLES-KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGT 535
+E F +D LE + + I L NP+ F+ +G+ P G LL GPPG
Sbjct: 566 AKREGFATVPNVTWADIGALEDIREELTMAILFLLCNPDQFRVLGLVTPAGVLLAGPPGC 625
Query: 536 GKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI 595
GKTLLA+AVA++ NF+ V +++ Y+GES R +R++F A+N PC+IF DE+DA+
Sbjct: 626 GKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDAL 685
Query: 596 GGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRK 655
RR + T A R + +LL +MDG ++ QV ++ ATNRPD +DPA+LRPGRLD+
Sbjct: 686 CPRRSARETGAS---VRVVNQLLTEMDGLETRQQVFIMAATNRPDIIDPAILRPGRLDKT 742
Query: 656 IEIPLPNEQARLEILK 671
+ + LP RL ILK
Sbjct: 743 LFVGLPPPADRLAILK 758
Score = 361 (132.1 bits), Expect = 7.4e-29, Sum P(2) = 7.4e-29
Identities = 72/160 (45%), Positives = 106/160 (66%)
Query: 512 NPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARL 571
+PE++ +G+ PP+G LL+GPPG GKTLLA A+A +LD LKV ++ IV GES +
Sbjct: 285 HPEVYHHLGVIPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEIVSGVSGESEQK 344
Query: 572 IREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVK 631
+RE+F A + PCI+F+DEIDAI +R +R I L+ ++ ++ + +V
Sbjct: 345 LRELFEQAVSSAPCILFIDEIDAITPKREIASKDMERRIVAQLLTCMDDLNNVAATARVL 404
Query: 632 MIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
+I ATNRPD+LDPAL R GR DR+I + +P+E +R IL+
Sbjct: 405 VIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQ 444
Score = 287 (106.1 bits), Expect = 2.8e-33, Sum P(2) = 2.8e-33
Identities = 62/161 (38%), Positives = 97/161 (60%)
Query: 276 IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 335
+++ Y+GES R +R++F A+N PC+IF DE+DA+ RR + T A R + +LL
Sbjct: 650 LLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSARETGAS---VRVVNQLLT 706
Query: 336 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGP 395
+MDG ++ QV ++ ATNRPD +DPA+LRPGRLD+ + + LP RLA I+ +
Sbjct: 707 EMDGLETRQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTK 766
Query: 396 IAKHGEIDYEAVVK--LSDSFNGADLRNVCTEAGLFAIRSE 434
+++ EA+ D + GADL + EA + A++ E
Sbjct: 767 PPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALKQE 807
Score = 235 (87.8 bits), Expect = 1.5e-27, Sum P(2) = 1.5e-27
Identities = 58/161 (36%), Positives = 90/161 (55%)
Query: 273 SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLME 332
++ IV GES + +RE+F A + PCI+F+DEIDAI +R +R I L+
Sbjct: 330 ATEIVSGVSGESEQKLRELFEQAVSSAPCILFIDEIDAITPKREIASKDMERRIVAQLLT 389
Query: 333 LLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQAR--LAHTWPIS 390
++ ++ + +V +I ATNRPD+LDPAL R GR DR+I + +P+E +R + T
Sbjct: 390 CMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRK 449
Query: 391 IHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI 431
+ P H + + L+ F GADL +C EA + A+
Sbjct: 450 LRL-PETFH----FRHLAHLTPGFVGADLMALCREAAMCAV 485
Score = 161 (61.7 bits), Expect = 4.6e-45, Sum P(2) = 4.6e-45
Identities = 29/76 (38%), Positives = 52/76 (68%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+ + +GG ++E+ +++ + + +PE++ +G+ PP+G LL+GPPG GKTLLA A+A
Sbjct: 261 VKFEDVGGNDTTLKEVCKML-VHMRHPEVYHHLGVIPPRGVLLHGPPGCGKTLLAHAIAG 319
Query: 228 QLDANFLKVVSSLFVT 243
+LD LKV ++ V+
Sbjct: 320 ELDLPILKVAATEIVS 335
Score = 153 (58.9 bits), Expect = 1.9e-32, Sum P(2) = 1.9e-32
Identities = 32/70 (45%), Positives = 45/70 (64%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++T++ IG L + EL I L NP+ F+ +G+ P G LL GPPG GKTLLA+AVA
Sbjct: 576 NVTWADIGALEDIREELTMAILFLLCNPDQFRVLGLVTPAGVLLAGPPGCGKTLLAKAVA 635
Query: 227 SQLDANFLKV 236
++ NF+ V
Sbjct: 636 NESGLNFISV 645
Score = 40 (19.1 bits), Expect = 7.4e-29, Sum P(2) = 7.4e-29
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 392 HAGPIAKHGEIDYEAVVKLSDSFNGAD 418
H A+HGE D E SD + D
Sbjct: 82 HLAKRARHGEEDNEYTESYSDDSSMED 108
>UNIPROTKB|J3QSA9 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031595 "nuclear proteasome complex"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
EMBL:AC015651 ChiTaRS:PSMC5 HGNC:HGNC:9552 Ensembl:ENST00000585123
Uniprot:J3QSA9
Length = 257
Score = 328 (120.5 bits), Expect = 9.6e-31, Sum P(2) = 9.6e-31
Identities = 63/104 (60%), Positives = 77/104 (74%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ K VIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++V S +
Sbjct: 152 EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 211
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGT 604
V K+IGE AR++RE+F AR H P IIFMDEID+IG R G+
Sbjct: 212 VQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 255
Score = 326 (119.8 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 85/205 (41%), Positives = 116/205 (56%)
Query: 43 KQYDKSENDLKALQS-VGQHDLLLHCVREQLKELTKQYDKSENDLKALQS----VGQVSL 97
+QY S+ ++ LQ V L ++ Q EL + +L+ LQ VG+V
Sbjct: 13 RQYYLSK--IEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVR 70
Query: 98 STSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLV 157
+ K V+VK ++VV + +D + RVAL + T+ + LP +VDPLV
Sbjct: 71 AMDKKK---VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLV 127
Query: 158 YNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTG 217
M E D TY IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTG
Sbjct: 128 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 187
Query: 218 KTLLARAVASQLDANFLKVVSSLFV 242
KTLLARAVA D F++V S V
Sbjct: 188 KTLLARAVAHHTDCTFIRVSGSELV 212
Score = 164 (62.8 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 32/65 (49%), Positives = 41/65 (63%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R HH + T+ S +V K+IGE AR++RE+F AR H P IIFMDEID+IG R
Sbjct: 191 LARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 250
Query: 316 FSEGT 320
G+
Sbjct: 251 LEGGS 255
Score = 44 (20.5 bits), Expect = 9.6e-31, Sum P(2) = 9.6e-31
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 15 QDYRKKLTEHAEVEGRLREMREQLKELTKQ 44
Q+ R+ + E+ ++R +RE+L+ L +Q
Sbjct: 32 QNLRRLQAQRNELNAKVRLLREELQLLQEQ 61
>POMBASE|SPBP22H7.05c [details] [associations]
symbol:abo2 "ATPase with bromodomain protein
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=ISM] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBP22H7.05c GO:GO:0005524 EMBL:CU329671
GO:GO:0045944 GO:GO:0016887 GO:GO:0006338 GO:GO:0000790 HSSP:Q01853
eggNOG:COG0464 EMBL:AB004535 RefSeq:NP_595602.1
ProteinModelPortal:Q9C0W2 EnsemblFungi:SPBP22H7.05c.1
GeneID:2541287 KEGG:spo:SPBP22H7.05c OrthoDB:EOG4N07QZ
NextBio:20802398 Uniprot:Q9C0W2
Length = 1201
Score = 396 (144.5 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 86/180 (47%), Positives = 115/180 (63%)
Query: 500 LDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV--- 556
L K ++ LPLL PE+F + ITPP+G L +GPPGTGKTL+AR +A+ K+
Sbjct: 382 LQLKEMVMLPLLYPEVFLHLHITPPRGVLFHGPPGTGKTLMARVLAANCSTKNQKISFFL 441
Query: 557 --SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 614
S + K++GE+ R +R +F AR QP IIF DEID + R S+ I TL
Sbjct: 442 RKGSDCLSKWVGEAERQLRLLFEEARRVQPSIIFFDEIDGLAPIRSSKQEQTHSSIVSTL 501
Query: 615 MELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+ L MDG D+ GQV +I ATNRP+ LDPAL RPGR DR+ PLPN+QAR++IL+I++
Sbjct: 502 LAL---MDGLDTRGQVVVIGATNRPNDLDPALRRPGRFDREFYFPLPNKQARMKILEINS 558
Score = 355 (130.0 bits), Expect = 7.9e-43, Sum P(2) = 7.9e-43
Identities = 113/357 (31%), Positives = 181/357 (50%)
Query: 260 STHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEG 319
ST + + ++F S + K++GE+ R +R +F AR QP IIF DEID + R S+
Sbjct: 431 STKNQKISFFLRKGSDCLSKWVGEAERQLRLLFEEARRVQPSIIFFDEIDGLAPIRSSKQ 490
Query: 320 TSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE 379
I TL+ L MDG D+ GQV +I ATNRP+ LDPAL RPGR DR+ PLPN+
Sbjct: 491 EQTHSSIVSTLLAL---MDGLDTRGQVVVIGATNRPNDLDPALRRPGRFDREFYFPLPNK 547
Query: 380 QARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSE--REY 437
QAR+ S+H P K E + + + + GADL+ +CTEA L A+R + Y
Sbjct: 548 QARMKILEINSLHFSP--KIPESYLLHLAESTSGYGGADLKALCTEAALNAVRRTFPQIY 605
Query: 438 VTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAIRSEREYVTQE----D-----FMKAVR 488
+ + F+ + ++S + C+ + + A+ + R V D F K++
Sbjct: 606 TSSDKFLIDLNEIS----VSICD-FVVASEKIAVSTRRSDVKPNIPITDSHKILFKKSIE 660
Query: 489 KVSDNKKLESKLD-YKPVIELPLLNP--ELFQRVGITPPKGCLLYGPP-------GTGKT 538
++ + KLD Y P +E P EL ++ I K + + P G G T
Sbjct: 661 VITSKIRRLLKLDVYLPTVESLQKLPAEELMRQKEINSLKTTMSFRPRLLITDIYGYGCT 720
Query: 539 LLARAVASQLDANFLKV--VSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEID 593
L++ + S LD ++ +S ++D + L+ ++F+ AR + P IIF++ ++
Sbjct: 721 YLSKVLFSMLDGIHVQSLDISELLMDTTTSPRS-LLTKIFSEARKNAPSIIFINNVE 776
Score = 185 (70.2 bits), Expect = 7.9e-43, Sum P(2) = 7.9e-43
Identities = 36/81 (44%), Positives = 55/81 (67%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 226
++ +++IGGL + I +L+E++ LPLL PE+F + ITPP+G L +GPPGTGKTL+AR +A
Sbjct: 368 NLDFNSIGGLEDIILQLKEMVMLPLLYPEVFLHLHITPPRGVLFHGPPGTGKTLMARVLA 427
Query: 227 SQLDANFLKVVSSLFVTSKED 247
+ K+ S F+ D
Sbjct: 428 ANCSTKNQKI--SFFLRKGSD 446
Score = 42 (19.8 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 402 IDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNS 461
+ E K S +FN A L TE + IR+ + E K + +DN + D +
Sbjct: 82 VSIENPSKPSAAFNDASLGKKSTEHQIDGIRNGSSNLQMEGNDKELD--TDNNE-DESTT 138
Query: 462 YRTEAGLFAIRSEREYVT 479
++ E + S + Y+T
Sbjct: 139 FKDEED--DLISPKSYLT 154
>UNIPROTKB|P96281 [details] [associations]
symbol:Rv0435c "Transitional endoplasmic reticulum ATPase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0051301 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842573 HSSP:Q01853 HOGENOM:HOG000223225 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 KO:K13525
SMART:SM01073 EMBL:CP003248 PIR:A70632 RefSeq:NP_214949.1
RefSeq:NP_334860.1 RefSeq:YP_006513761.1 SMR:P96281
EnsemblBacteria:EBMYCT00000001241 EnsemblBacteria:EBMYCT00000071017
GeneID:13318302 GeneID:886352 GeneID:923768 KEGG:mtc:MT0451
KEGG:mtu:Rv0435c KEGG:mtv:RVBD_0435c PATRIC:18122702
TubercuList:Rv0435c OMA:KTHGFAG ProtClustDB:CLSK871802
Uniprot:P96281
Length = 728
Score = 388 (141.6 bits), Expect = 3.5e-42, Sum P(3) = 3.5e-42
Identities = 81/183 (44%), Positives = 118/183 (64%)
Query: 509 PLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGES 568
PL +P+ F R+G+ PP+G LLYGPPG GKT + RA+AS + V S ++DK++G S
Sbjct: 483 PLQHPDTFARLGVEPPRGVLLYGPPGCGKTFVVRALASTGQLSVHAVKGSELMDKWVGSS 542
Query: 569 ARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ-RTLMELLNQMDGFDSL 627
+ +RE+F AR+ P ++F+DE+DA+ RR G S D + R + LL ++DG D L
Sbjct: 543 EKAVRELFRRARDSAPSLVFLDELDALAPRR---GQSFDSGVSDRVVAALLTELDGIDPL 599
Query: 628 GQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAG---PIAKHGEIG 684
V M+ ATNRPD +DPALLRPGRL+R + + P+ AR EIL+ AG P++ ++
Sbjct: 600 RDVVMLGATNRPDLIDPALLRPGRLERLVFVEPPDAAARREILRT-AGKSIPLSSDVDLD 658
Query: 685 DAA 687
+ A
Sbjct: 659 EVA 661
Score = 273 (101.2 bits), Expect = 7.7e-33, Sum P(2) = 7.7e-33
Identities = 73/203 (35%), Positives = 111/203 (54%)
Query: 274 SAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ-RTLME 332
S ++DK++G S + +RE+F AR+ P ++F+DE+DA+ RR G S D + R +
Sbjct: 532 SELMDKWVGSSEKAVRELFRRARDSAPSLVFLDELDALAPRR---GQSFDSGVSDRVVAA 588
Query: 333 LLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQAR--LAHTWPIS 390
LL ++DG D L V M+ ATNRPD +DPALLRPGRL+R + + P+ AR + T S
Sbjct: 589 LLTELDGIDPLRDVVMLGATNRPDLIDPALLRPGRLERLVFVEPPDAAARREILRTAGKS 648
Query: 391 IHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRS--EREYVTQEDFMKA-- 446
I P++ ++D + V D ++ AD + EA L A+R + VT D A
Sbjct: 649 I---PLSS--DVDLDEVAAGLDGYSAADCVALLREAALTAMRRSIDAANVTAADLATARE 703
Query: 447 -VRKVSDNKKLDHCNSYRTEAGL 468
VR D ++ + T+ L
Sbjct: 704 TVRASLDPLQVASLRKFGTKGDL 726
Score = 169 (64.5 bits), Expect = 7.7e-33, Sum P(2) = 7.7e-33
Identities = 36/86 (41%), Positives = 53/86 (61%)
Query: 153 VDPLVYNMSHE-DPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
+ PL + S E GD+T +G ++ + L E + PL +P+ F R+G+ PP+G LLY
Sbjct: 445 IRPLSRSASDEVTVGDVTLDDVGDMAAAKQALTEAVLWPLQHPDTFARLGVEPPRGVLLY 504
Query: 212 GPPGTGKTLLARAVAS--QLDANFLK 235
GPPG GKT + RA+AS QL + +K
Sbjct: 505 GPPGCGKTFVVRALASTGQLSVHAVK 530
Score = 126 (49.4 bits), Expect = 0.00031, P = 0.00031
Identities = 45/173 (26%), Positives = 75/173 (43%)
Query: 506 IELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 565
++L L P L Q +G G L+ GP G GK L RAV D L + +
Sbjct: 229 LKLALDEPHLLQTLGAGTNLGVLVSGPAGVGKATLVRAVC---DGRRLVTLDGPEIGALA 285
Query: 566 -GESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF 624
G+ + + R H+ ++ + + DA+ A E +L +L+++
Sbjct: 286 AGDRVKAVASAVQAVR-HEGGVLLITDADAL--------LPAAAEPVASL--ILSELRTA 334
Query: 625 DSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPI 677
+ V +I + RPD LD L P DR++ +PLP+ R +L+ P+
Sbjct: 335 VATAGVVLIATSARPDQLDARLRSPELCDRELGLPLPDAATRKSLLEALLNPV 387
Score = 89 (36.4 bits), Expect = 3.5e-42, Sum P(3) = 3.5e-42
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 167 DITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAV 225
+I + G Q +L E ++L L P L Q +G G L+ GP G GK L RAV
Sbjct: 209 EIQIEELKGAQPQAAKLTEWLKLALDEPHLLQTLGAGTNLGVLVSGPAGVGKATLVRAV 267
Score = 85 (35.0 bits), Expect = 3.5e-42, Sum P(3) = 3.5e-42
Identities = 25/85 (29%), Positives = 41/85 (48%)
Query: 346 VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYE 405
V +I + RPD LD L P DR++ +PLP+ R + + P+ G+++ +
Sbjct: 340 VVLIATSARPDQLDARLRSPELCDRELGLPLPDAATRKSL---LEALLNPVPT-GDLNLD 395
Query: 406 AVVKLSDSFNGADLRNVCTEAGLFA 430
+ + F ADL + EA L A
Sbjct: 396 EIASRTPGFVVADLAALVREAALRA 420
>UNIPROTKB|E2QSC5 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 Ensembl:ENSCAFT00000021792 Uniprot:E2QSC5
Length = 747
Score = 368 (134.6 bits), Expect = 8.3e-42, Sum P(2) = 8.3e-42
Identities = 131/418 (31%), Positives = 203/418 (48%)
Query: 282 GESARLIREMFNYAR---NHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 338
GE+ +R +F AR + P ++F+DE+DA+ RR G + R + ++L +D
Sbjct: 266 GETEENVRRVFGRARELASRGPTLLFLDEVDALCPRR---GGAHRAPESRAVAQVLTLLD 322
Query: 339 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAK 398
G V ++ +TNRPD LDPAL RPGR DR++ I P + R A I+ PI+
Sbjct: 323 GIRGDRDVVVVASTNRPDALDPALRRPGRFDREVVIGTPTLKQRKAILQVITSKM-PISS 381
Query: 399 HGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI-RSEREY----VTQEDFMKAVRKVSDN 453
++D + +++ + GADL +C EA L A+ SE+ + + DF +A +K+ +
Sbjct: 382 --QVDLSLLAEMTVGYVGADLTALCREAALHALLHSEKNKDNPAIDETDFFEAFKKIQPS 439
Query: 454 KKLDHCNSYRTEAGLFAIRS-EREYVTQEDFMKAVRKVSDNKKLESKLDYKPVIELPLLN 512
S+R+ GL I+ + E + + +K K S L+ ++ + + L
Sbjct: 440 -------SFRSVIGLMDIKPVDWEQIGGLEDVKLKLKQSIEWPLKFPREF---VRMGLTQ 489
Query: 513 PELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLI 572
P+ G PP GC + L S + + + S + D E
Sbjct: 490 PKGVLLYG--PP-GC---AKTTLVRALATSCHCSFVSVSGADLFSPFVGDS---EKVLSQ 540
Query: 573 REMFNYARNHQPCIIFMDEIDAI-GGRRFS--EGTSADREIQRTLMEL------LNQMDG 623
+++F AR + P I+F+DEID+I G R S E +R + L EL + G
Sbjct: 541 QKVFRQARANTPAIVFLDEIDSILGSRSISKTECNVQERVLSVLLNELDGVGLKTTERRG 600
Query: 624 FDSLGQ---------VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKI 672
S Q V ++ ATNRPD LD ALLRPGRLD+ I IP P+E+ RL ILK+
Sbjct: 601 SKSDQQEFQEVFNRNVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKV 658
Score = 289 (106.8 bits), Expect = 6.5e-22, P = 6.5e-22
Identities = 66/173 (38%), Positives = 97/173 (56%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ ++ LPL P +G+ P+G LL GPPG GKT L RAVA + A L V + A+
Sbjct: 203 RELLRLPLRYPRTLAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQG 262
Query: 563 KYIGESARLIREMFNYAR---NHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 619
GE+ +R +F AR + P ++F+DE+DA+ RR G + R + ++L
Sbjct: 263 ARPGETEENVRRVFGRARELASRGPTLLFLDEVDALCPRR---GGAHRAPESRAVAQVLT 319
Query: 620 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKI 672
+DG V ++ +TNRPD LDPAL RPGR DR++ I P + R IL++
Sbjct: 320 LLDGIRGDRDVVVVASTNRPDALDPALRRPGRFDREVVIGTPTLKQRKAILQV 372
Score = 267 (99.0 bits), Expect = 7.6e-19, Sum P(2) = 7.6e-19
Identities = 75/219 (34%), Positives = 112/219 (51%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+ + IGGL + +L++ IE PL P F R+G+T PKG LLYGPPG KT L RA+A+
Sbjct: 453 VDWEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALAT 512
Query: 228 QLDANFLKVVSS-LFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESAR 286
+F+ V + LF D ++ Q R F +D +G S
Sbjct: 513 SCHCSFVSVSGADLFSPFVGDSEKVLSQQKVFRQAR-ANTPAIVFLDE--IDSILG-SRS 568
Query: 287 LIREMFNYARNHQPCIIFMDEIDAIGGRRFSE-GTSADREIQRTLMELLNQMDGFDSLGQ 345
+ + N + + ++E+D +G + G+ +D Q+ E+ N+
Sbjct: 569 ISKTECNV--QERVLSVLLNELDGVGLKTTERRGSKSD---QQEFQEVFNR--------N 615
Query: 346 VKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLA 384
V ++ ATNRPD LD ALLRPGRLD+ I IP P+E+ RL+
Sbjct: 616 VMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLS 654
Score = 236 (88.1 bits), Expect = 5.1e-27, Sum P(2) = 5.1e-27
Identities = 67/184 (36%), Positives = 100/184 (54%)
Query: 289 REMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG--------- 339
+++F AR + P I+F+DEID+I G R T + + +R L LLN++DG
Sbjct: 541 QKVFRQARANTPAIVFLDEIDSILGSRSISKTECNVQ-ERVLSVLLNELDGVGLKTTERR 599
Query: 340 --------FDSL--GQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPI 389
F + V ++ ATNRPD LD ALLRPGRLD+ I IP P+E+ RL+ +
Sbjct: 600 GSKSDQQEFQEVFNRNVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLS-ILKV 658
Query: 390 SIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRS---EREYVTQEDFMKA 446
P+ ++ E + + F+GADL N+C EA L A++ E V QE F+K+
Sbjct: 659 CTKNMPMGP--DVSLENIAAETCFFSGADLGNLCKEAALLALQENGLEATTVKQEHFLKS 716
Query: 447 VRKV 450
++ V
Sbjct: 717 LKTV 720
Score = 153 (58.9 bits), Expect = 8.3e-42, Sum P(2) = 8.3e-42
Identities = 32/64 (50%), Positives = 39/64 (60%)
Query: 173 IGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDAN 232
+GGLSE LRE++ LPL P +G+ P+G LL GPPG GKT L RAVA + A
Sbjct: 192 LGGLSEAADSLRELLRLPLRYPRTLAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 251
Query: 233 FLKV 236
L V
Sbjct: 252 LLAV 255
Score = 42 (19.8 bits), Expect = 7.6e-19, Sum P(2) = 7.6e-19
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 465 EAGLFAIRS---EREYVTQEDFMKAVRKVSDNKKLESKLDYKPVIE 507
EA L A++ E V QE F+K+++ V + E Y+ + +
Sbjct: 692 EAALLALQENGLEATTVKQEHFLKSLKTVKPSLSPEDLTLYENLFQ 737
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 402 (146.6 bits), Expect = 1.0e-34, P = 1.0e-34
Identities = 81/178 (45%), Positives = 117/178 (65%)
Query: 497 ESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 556
E+K + + ++E L NP+ F R+G PKG LL GPPGTGKTLLARA+A + F +
Sbjct: 163 EAKEELEEIVEF-LRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEAGVPFFTIS 221
Query: 557 SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLME 616
S V+ ++G A +R+MF A+ + PCI+F+DEIDA+G R + + E ++TL +
Sbjct: 222 GSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGYGGGNDEREQTLNQ 281
Query: 617 LLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
LL +MDGF++ V ++ ATNR D LDPALLRPGR DR + + P+ + R +IL +HA
Sbjct: 282 LLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVTVGNPDIKGREKILGVHA 339
Score = 335 (123.0 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 72/183 (39%), Positives = 107/183 (58%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F S V+ ++G A +R+MF A+ + PCI+F+DEIDA+G R + + E +
Sbjct: 217 FFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGYGGGNDERE 276
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
+TL +LL +MDGF++ V ++ ATNR D LDPALLRPGR DR + + P+ + R
Sbjct: 277 QTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVTVGNPDIKGREKI-- 334
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ +HA ++D + + + F+GADL N+ EA L A R R +VT EDF A
Sbjct: 335 -LGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRFVTMEDFENAK 393
Query: 448 RKV 450
KV
Sbjct: 394 DKV 396
Score = 183 (69.5 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 39/83 (46%), Positives = 50/83 (60%)
Query: 160 MSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKT 219
M E G +T+ + G+ E EL E++E L NP+ F R+G PKG LL GPPGTGKT
Sbjct: 145 MLTEKHGRVTFDDVAGIDEAKEELEEIVEF-LRNPQKFSRLGGKIPKGALLVGPPGTGKT 203
Query: 220 LLARAVASQLDANFLKVVSSLFV 242
LLARA+A + F + S FV
Sbjct: 204 LLARAIAGEAGVPFFTISGSDFV 226
Score = 58 (25.5 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 14/26 (53%), Positives = 15/26 (57%)
Query: 465 EAGLFAIRSEREYVTQEDFMKAVRKV 490
EA L A R R +VT EDF A KV
Sbjct: 371 EAALMAARVGRRFVTMEDFENAKDKV 396
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 402 (146.6 bits), Expect = 1.0e-34, P = 1.0e-34
Identities = 81/178 (45%), Positives = 117/178 (65%)
Query: 497 ESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 556
E+K + + ++E L NP+ F R+G PKG LL GPPGTGKTLLARA+A + F +
Sbjct: 163 EAKEELEEIVEF-LRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEAGVPFFTIS 221
Query: 557 SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLME 616
S V+ ++G A +R+MF A+ + PCI+F+DEIDA+G R + + E ++TL +
Sbjct: 222 GSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGYGGGNDEREQTLNQ 281
Query: 617 LLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
LL +MDGF++ V ++ ATNR D LDPALLRPGR DR + + P+ + R +IL +HA
Sbjct: 282 LLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVTVGNPDIKGREKILGVHA 339
Score = 335 (123.0 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 72/183 (39%), Positives = 107/183 (58%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F S V+ ++G A +R+MF A+ + PCI+F+DEIDA+G R + + E +
Sbjct: 217 FFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGYGGGNDERE 276
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
+TL +LL +MDGF++ V ++ ATNR D LDPALLRPGR DR + + P+ + R
Sbjct: 277 QTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVTVGNPDIKGREKI-- 334
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ +HA ++D + + + F+GADL N+ EA L A R R +VT EDF A
Sbjct: 335 -LGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRFVTMEDFENAK 393
Query: 448 RKV 450
KV
Sbjct: 394 DKV 396
Score = 183 (69.5 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 39/83 (46%), Positives = 50/83 (60%)
Query: 160 MSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKT 219
M E G +T+ + G+ E EL E++E L NP+ F R+G PKG LL GPPGTGKT
Sbjct: 145 MLTEKHGRVTFDDVAGIDEAKEELEEIVEF-LRNPQKFSRLGGKIPKGALLVGPPGTGKT 203
Query: 220 LLARAVASQLDANFLKVVSSLFV 242
LLARA+A + F + S FV
Sbjct: 204 LLARAIAGEAGVPFFTISGSDFV 226
Score = 58 (25.5 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 14/26 (53%), Positives = 15/26 (57%)
Query: 465 EAGLFAIRSEREYVTQEDFMKAVRKV 490
EA L A R R +VT EDF A KV
Sbjct: 371 EAALMAARVGRRFVTMEDFENAKDKV 396
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 402 (146.6 bits), Expect = 7.2e-35, P = 7.2e-35
Identities = 83/179 (46%), Positives = 117/179 (65%)
Query: 497 ESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 556
E+K + +++ L + + F ++G PKGCLL G PGTGKTLLARA+A + + F +
Sbjct: 165 EAKEELIEIVDF-LKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGEANVPFFSIS 223
Query: 557 SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR-FSEGTSADREIQRTLM 615
S V+ ++G A +R+MF + H PCIIF+DEIDA+G R G D E ++TL
Sbjct: 224 GSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIGLGGGND-EREQTLN 282
Query: 616 ELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+LL +MDGF+S V +I ATNRPD LDPALLRPGR DR++ I +P+ R +I+ +HA
Sbjct: 283 QLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIPDINGREKIIAVHA 341
Score = 352 (129.0 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 80/185 (43%), Positives = 112/185 (60%)
Query: 270 PFYS---SAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR-FSEGTSADRE 325
PF+S S V+ ++G A +R+MF + H PCIIF+DEIDA+G R G D E
Sbjct: 218 PFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIGLGGGND-E 276
Query: 326 IQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAH 385
++TL +LL +MDGF+S V +I ATNRPD LDPALLRPGR DR++ I +P+ R
Sbjct: 277 REQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIPDINGREKI 336
Query: 386 TWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMK 445
I++HA + ++D + + + F+GADL N+ EA L A R +++ VT DF
Sbjct: 337 ---IAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAARLDKKIVTMCDFEY 393
Query: 446 AVRKV 450
A KV
Sbjct: 394 ARDKV 398
Score = 161 (61.7 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 33/77 (42%), Positives = 48/77 (62%)
Query: 166 GDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAV 225
G +T+ + G+ E EL E+++ L + + F ++G PKGCLL G PGTGKTLLARA+
Sbjct: 153 GKVTFDDVAGIEEAKEELIEIVDF-LKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAI 211
Query: 226 ASQLDANFLKVVSSLFV 242
A + + F + S FV
Sbjct: 212 AGEANVPFFSISGSDFV 228
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 402 (146.6 bits), Expect = 7.2e-35, P = 7.2e-35
Identities = 83/179 (46%), Positives = 117/179 (65%)
Query: 497 ESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 556
E+K + +++ L + + F ++G PKGCLL G PGTGKTLLARA+A + + F +
Sbjct: 165 EAKEELIEIVDF-LKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGEANVPFFSIS 223
Query: 557 SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR-FSEGTSADREIQRTLM 615
S V+ ++G A +R+MF + H PCIIF+DEIDA+G R G D E ++TL
Sbjct: 224 GSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIGLGGGND-EREQTLN 282
Query: 616 ELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
+LL +MDGF+S V +I ATNRPD LDPALLRPGR DR++ I +P+ R +I+ +HA
Sbjct: 283 QLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIPDINGREKIIAVHA 341
Score = 352 (129.0 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 80/185 (43%), Positives = 112/185 (60%)
Query: 270 PFYS---SAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR-FSEGTSADRE 325
PF+S S V+ ++G A +R+MF + H PCIIF+DEIDA+G R G D E
Sbjct: 218 PFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIGLGGGND-E 276
Query: 326 IQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAH 385
++TL +LL +MDGF+S V +I ATNRPD LDPALLRPGR DR++ I +P+ R
Sbjct: 277 REQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIPDINGREKI 336
Query: 386 TWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMK 445
I++HA + ++D + + + F+GADL N+ EA L A R +++ VT DF
Sbjct: 337 ---IAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAARLDKKIVTMCDFEY 393
Query: 446 AVRKV 450
A KV
Sbjct: 394 ARDKV 398
Score = 161 (61.7 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 33/77 (42%), Positives = 48/77 (62%)
Query: 166 GDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAV 225
G +T+ + G+ E EL E+++ L + + F ++G PKGCLL G PGTGKTLLARA+
Sbjct: 153 GKVTFDDVAGIEEAKEELIEIVDF-LKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAI 211
Query: 226 ASQLDANFLKVVSSLFV 242
A + + F + S FV
Sbjct: 212 AGEANVPFFSISGSDFV 228
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 410 (149.4 bits), Expect = 6.8e-36, Sum P(2) = 6.8e-36
Identities = 86/190 (45%), Positives = 123/190 (64%)
Query: 497 ESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 556
E+K + + +I+ L +P+ F ++G PKG LL GPPGTGKTLLARAVA + F +
Sbjct: 160 EAKEELEEIIQF-LKDPKKFTKLGGRIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSIS 218
Query: 557 SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLME 616
S V+ ++G A +R++F + + PCIIF+DEIDA+G R + E ++TL +
Sbjct: 219 GSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQ 278
Query: 617 LLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAG- 675
LL +MDGF+S V +I ATNRPD LDPALLRPGR DR++ +P P+ + R ILK+H
Sbjct: 279 LLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDRQVVVPQPDVKGREMILKVHTKK 338
Query: 676 -PIAKHGEIG 684
P+A ++G
Sbjct: 339 TPLASDVDLG 348
Score = 342 (125.4 bits), Expect = 3.4e-41, Sum P(2) = 3.4e-41
Identities = 74/184 (40%), Positives = 109/184 (59%)
Query: 270 PFYS---SAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI 326
PF+S S V+ ++G A +R++F + + PCIIF+DEIDA+G R + E
Sbjct: 213 PFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEIDAVGRHRGAGLGGGHDER 272
Query: 327 QRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHT 386
++TL +LL +MDGF+S V +I ATNRPD LDPALLRPGR DR++ +P P+ + R
Sbjct: 273 EQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDRQVVVPQPDVKGR---E 329
Query: 387 WPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKA 446
+ +H ++D + + + F+GADL NV EA L A R ++ +V +DF A
Sbjct: 330 MILKVHTKKTPLASDVDLGVIARGTPGFSGADLSNVVNEAALLAARKDKSFVEMKDFDDA 389
Query: 447 VRKV 450
KV
Sbjct: 390 KDKV 393
Score = 170 (64.9 bits), Expect = 3.4e-41, Sum P(2) = 3.4e-41
Identities = 37/80 (46%), Positives = 49/80 (61%)
Query: 163 EDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLA 222
E G +T+ + G+ E EL E+I+ L +P+ F ++G PKG LL GPPGTGKTLLA
Sbjct: 145 EAQGRVTFEDVAGVDEAKEELEEIIQF-LKDPKKFTKLGGRIPKGVLLVGPPGTGKTLLA 203
Query: 223 RAVASQLDANFLKVVSSLFV 242
RAVA + F + S FV
Sbjct: 204 RAVAGEAGVPFFSISGSDFV 223
Score = 49 (22.3 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 465 EAGLFAIRSEREYVTQEDFMKAVRKV 490
EA L A R ++ +V +DF A KV
Sbjct: 368 EAALLAARKDKSFVEMKDFDDAKDKV 393
Score = 40 (19.1 bits), Expect = 6.8e-36, Sum P(2) = 6.8e-36
Identities = 15/56 (26%), Positives = 23/56 (41%)
Query: 271 FYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI 326
FY + + I L+ +FN R Q + + D I A+ + S T EI
Sbjct: 4 FYKNLALWLVISLMMILLFNLFNKPRTTQERLGYSDFIAAVDAGKVSTVTVQGNEI 59
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 412 (150.1 bits), Expect = 6.8e-36, P = 6.8e-36
Identities = 85/189 (44%), Positives = 122/189 (64%)
Query: 497 ESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 556
E+K + ++E L P+ FQ++G PKGCLL GPPGTGKTLLA+A+A + F +
Sbjct: 164 EAKEELAEIVEF-LREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEAKVPFFSIS 222
Query: 557 SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLME 616
S V+ ++G A +R+MF + + PC+IF+DEIDA+G R + E ++TL +
Sbjct: 223 GSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVGRHRGVGFGGGNDEREQTLNQ 282
Query: 617 LLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAG- 675
LL +MDGF++ V +I ATNRPD LDPALLRPGR DR+I I +P+ R +IL++H
Sbjct: 283 LLVEMDGFEANEGVIIIAATNRPDVLDPALLRPGRFDRQITISIPDIAGRQKILEVHLKK 342
Query: 676 -PIAKHGEI 683
P A + E+
Sbjct: 343 IPTAPNVEV 351
Score = 331 (121.6 bits), Expect = 2.0e-40, Sum P(2) = 2.0e-40
Identities = 73/184 (39%), Positives = 108/184 (58%)
Query: 270 PFYS---SAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI 326
PF+S S V+ ++G A +R+MF + + PC+IF+DEIDA+G R + E
Sbjct: 217 PFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVGRHRGVGFGGGNDER 276
Query: 327 QRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHT 386
++TL +LL +MDGF++ V +I ATNRPD LDPALLRPGR DR+I I +P+ R
Sbjct: 277 EQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDPALLRPGRFDRQITISIPDIAGRQKI- 335
Query: 387 WPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKA 446
+ +H I ++ + + + F+GADL N+ E+ L A R ++ VT EDF A
Sbjct: 336 --LEVHLKKIPTAPNVEVSIIARGTPGFSGADLANLVNESALIAARRNKKVVTNEDFEYA 393
Query: 447 VRKV 450
K+
Sbjct: 394 RDKI 397
Score = 176 (67.0 bits), Expect = 2.0e-40, Sum P(2) = 2.0e-40
Identities = 35/75 (46%), Positives = 48/75 (64%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+T+ + G+ E EL E++E L P+ FQ++G PKGCLL GPPGTGKTLLA+A+A
Sbjct: 154 VTFHDVAGIDEAKEELAEIVEF-LREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAG 212
Query: 228 QLDANFLKVVSSLFV 242
+ F + S FV
Sbjct: 213 EAKVPFFSISGSDFV 227
Score = 48 (22.0 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 465 EAGLFAIRSEREYVTQEDFMKAVRKV 490
E+ L A R ++ VT EDF A K+
Sbjct: 372 ESALIAARRNKKVVTNEDFEYARDKI 397
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 416 (151.5 bits), Expect = 7.0e-36, Sum P(2) = 7.0e-36
Identities = 87/185 (47%), Positives = 121/185 (65%)
Query: 497 ESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 556
E+K + K ++E L +P FQR+G P G LL GPPGTGKTLLA+AVA + F +
Sbjct: 163 EAKEEVKELVEF-LRDPGKFQRLGGKMPCGVLLVGPPGTGKTLLAKAVAGEAKVPFFTIS 221
Query: 557 SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLME 616
S V+ ++G A +R+MF+ A+ PCIIF+DEIDA+G R + E ++TL +
Sbjct: 222 GSDFVEMFVGVGASRVRDMFDQAKKQAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQ 281
Query: 617 LLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAG- 675
LL +MDGF+ + ++ ATNRPD LDPALLRPGR DR++ +PLP+ + R ILK+H
Sbjct: 282 LLVEMDGFEGKEGIIVMAATNRPDVLDPALLRPGRFDRQVVVPLPDIKGREYILKVHMNK 341
Query: 676 -PIAK 679
P+AK
Sbjct: 342 LPLAK 346
Score = 348 (127.6 bits), Expect = 2.1e-40, Sum P(3) = 2.1e-40
Identities = 71/183 (38%), Positives = 113/183 (61%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F S V+ ++G A +R+MF+ A+ PCIIF+DEIDA+G R + E +
Sbjct: 217 FFTISGSDFVEMFVGVGASRVRDMFDQAKKQAPCIIFIDEIDAVGRHRGAGLGGGHDERE 276
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
+TL +LL +MDGF+ + ++ ATNRPD LDPALLRPGR DR++ +PLP+ + R +
Sbjct: 277 QTLNQLLVEMDGFEGKEGIIVMAATNRPDVLDPALLRPGRFDRQVVVPLPDIKGR-EYIL 335
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ ++ P+AK ++ + + + F+GADL N+ EA LFA R ++ V+ +F +A
Sbjct: 336 KVHMNKLPLAK--DVKASVIARGTPGFSGADLANIVNEAALFAARENKKDVSMSEFERAK 393
Query: 448 RKV 450
K+
Sbjct: 394 DKI 396
Score = 161 (61.7 bits), Expect = 2.1e-40, Sum P(3) = 2.1e-40
Identities = 35/80 (43%), Positives = 49/80 (61%)
Query: 163 EDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLA 222
+D +T+ + G+ E E++E++E L +P FQR+G P G LL GPPGTGKTLLA
Sbjct: 148 QDQVKVTFDDVAGVDEAKEEVKELVEF-LRDPGKFQRLGGKMPCGVLLVGPPGTGKTLLA 206
Query: 223 RAVASQLDANFLKVVSSLFV 242
+AVA + F + S FV
Sbjct: 207 KAVAGEAKVPFFTISGSDFV 226
Score = 48 (22.0 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 465 EAGLFAIRSEREYVTQEDFMKAVRKV 490
EA LFA R ++ V+ +F +A K+
Sbjct: 371 EAALFAARENKKDVSMSEFERAKDKI 396
Score = 42 (19.8 bits), Expect = 5.2e-07, Sum P(3) = 5.2e-07
Identities = 25/97 (25%), Positives = 42/97 (43%)
Query: 412 DSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNSYRTEAGLFAI 471
D ++ R C AGLF R E + D + K + + T+ GL
Sbjct: 457 DRYSMTKRRLECQLAGLFGGRIAEEIIFGPDLVTTGASNDIEKATEIARNMVTKWGLSQK 516
Query: 472 RSEREYVTQED--FM-KAV--RK-VSD--NKKLESKL 500
Y +E F+ ++V RK +SD NK+++S++
Sbjct: 517 LGPLTYREEEGEVFLGRSVTQRKDISDATNKEIDSEV 553
Score = 37 (18.1 bits), Expect = 2.1e-40, Sum P(3) = 2.1e-40
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 664 QARLEILKIHAGPIAKHGEIGDAATKWVL 692
+ +E L + A + K+ IG+A K +L
Sbjct: 569 EEHIEQLHLMAKALIKYETIGEAQIKEIL 597
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 406 (148.0 bits), Expect = 2.3e-35, P = 2.3e-35
Identities = 87/184 (47%), Positives = 121/184 (65%)
Query: 497 ESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 556
E+K + V+E L + E FQ +G PKG LL GPPGTGKTLLA+A+A + F +
Sbjct: 166 EAKQEVGEVVEF-LKSREKFQALGARIPKGILLIGPPGTGKTLLAKAIAGEAGVPFFSIS 224
Query: 557 SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLME 616
S V+ ++G A +R++F+ A+ + PCIIF+DEIDA+G +R + E ++TL +
Sbjct: 225 GSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQ 284
Query: 617 LLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA-G 675
+L +MDGFD+ V +I ATNRPD LDPALLRPGR DR++ + P+ R ILKIHA G
Sbjct: 285 ILVEMDGFDTDTSVIVIAATNRPDILDPALLRPGRFDRRVVLDKPDITGREAILKIHAKG 344
Query: 676 -PIA 678
P+A
Sbjct: 345 KPLA 348
Score = 335 (123.0 bits), Expect = 5.5e-40, Sum P(3) = 5.5e-40
Identities = 77/186 (41%), Positives = 116/186 (62%)
Query: 270 PFYS---SAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI 326
PF+S S V+ ++G A +R++F+ A+ + PCIIF+DEIDA+G +R + E
Sbjct: 219 PFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDER 278
Query: 327 QRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHT 386
++TL ++L +MDGFD+ V +I ATNRPD LDPALLRPGR DR++ + P+ R A
Sbjct: 279 EQTLNQILVEMDGFDTDTSVIVIAATNRPDILDPALLRPGRFDRRVVLDKPDITGREAI- 337
Query: 387 WPISIHA-G-PIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFM 444
+ IHA G P+A ++ E + K + F+GADL N+ EA + A R R+ V ED
Sbjct: 338 --LKIHAKGKPLAD--TVNLENLAKQTVGFSGADLANLLNEAAILAARKNRKVVETEDLE 393
Query: 445 KAVRKV 450
+++ +V
Sbjct: 394 ESIDRV 399
Score = 167 (63.8 bits), Expect = 5.5e-40, Sum P(3) = 5.5e-40
Identities = 38/86 (44%), Positives = 53/86 (61%)
Query: 157 VYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGT 216
++NM D IT++ + G+ E +E+ EV+E L + E FQ +G PKG LL GPPGT
Sbjct: 148 LFNM---DKPTITFANVAGVDEAKQEVGEVVEF-LKSREKFQALGARIPKGILLIGPPGT 203
Query: 217 GKTLLARAVASQLDANFLKVVSSLFV 242
GKTLLA+A+A + F + S FV
Sbjct: 204 GKTLLAKAIAGEAGVPFFSISGSEFV 229
Score = 45 (20.9 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 465 EAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESK 499
EA + A R R+ V ED +++ +V + +S+
Sbjct: 374 EAAILAARKNRKVVETEDLEESIDRVIAGPERKSR 408
Score = 39 (18.8 bits), Expect = 5.5e-40, Sum P(3) = 5.5e-40
Identities = 20/89 (22%), Positives = 35/89 (39%)
Query: 486 AVRKVSDNKKLESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVA 545
A+ N+K+ D + I+ + PE R T K Y G G L+ R V
Sbjct: 376 AILAARKNRKVVETEDLEESIDRVIAGPERKSRRISTQEKEVTAYHETGHG--LVLRLVQ 433
Query: 546 SQLDANFLKVVSSAIVDKYIGESARLIRE 574
+ + +V+ + +G + +L E
Sbjct: 434 GADPVHKISIVARGMT---LGHTRQLPNE 459
Score = 37 (18.1 bits), Expect = 8.9e-40, Sum P(3) = 8.9e-40
Identities = 15/67 (22%), Positives = 29/67 (43%)
Query: 437 YVTQE-DFMKAVRKVSDN--KKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDN 493
YV +E F + SD+ + D + T G+ R + +E+ + R++S+
Sbjct: 480 YVAEELTFKELSTGASDDLRRATDIAHKMVTSYGMSDKLGPRTFGNKEEMVFLGREISEQ 539
Query: 494 KKLESKL 500
K K+
Sbjct: 540 KDYGEKV 546
>UNIPROTKB|Q60HE0 [details] [associations]
symbol:PEX6 "Peroxin Pex6p" species:9541 "Macaca
fascicularis" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006625 "protein targeting to
peroxisome" evidence=ISS] [GO:0007031 "peroxisome organization"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0050821
"protein stabilization" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0032403 GO:GO:0008022 GO:GO:0042623
GO:GO:0016561 HOVERGEN:HBG002311 EMBL:AB125187
ProteinModelPortal:Q60HE0 Uniprot:Q60HE0
Length = 570
Score = 397 (144.8 bits), Expect = 5.7e-40, Sum P(2) = 5.7e-40
Identities = 120/390 (30%), Positives = 197/390 (50%)
Query: 288 IREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVK 347
++ +F+ AR +P ++ + +D +G R +G D + L LL D +S +
Sbjct: 101 LQAIFSRARRCRPAVLLLTAVDLLGRDR--DGLGEDARVVAALRHLLLDEDPLNSCPPLM 158
Query: 348 MIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAV 407
++ T+R L PA ++ ++E+P +E RL+ ++ H P+ + E++ +
Sbjct: 159 VVATTSRAQDL-PADVQTA-FPHELEVPALSEGQRLSILRALTAHL-PLGQ--EVNLAQL 213
Query: 408 VKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLDHCNS-YRTEA 466
+ F DL + T S R T+ + +++ + + C + + A
Sbjct: 214 ARRCAGFVVGDLYALLTH-------SSRAACTRIKNLGLAGGLTEEDEGELCAAGFPLLA 266
Query: 467 GLFAIRSEREYVTQEDFMKA--VRKVS--DNKKL-ESKLDYKPVIELPLLNPELFQRVGI 521
F E + + A + VS D L E K + I+LPL +PEL +G+
Sbjct: 267 EDFGQALELQQTAHSQAVGAPKIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGL 325
Query: 522 TPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARN 581
G LL+GPPGTGKTLLA+AVA++ FL V +++ Y+G+S +RE+F AR
Sbjct: 326 RR-SGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARA 384
Query: 582 HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDT 641
PCIIF DE+D++ R G S + R + +LL ++DG S V +I ATNRPD
Sbjct: 385 AAPCIIFFDELDSLAPSRGRSGDSGG-VMDRVVSQLLAELDGLHSTQDVFVIGATNRPDL 443
Query: 642 LDPALLRPGRLDRKIEIPLPNEQA-RLEIL 670
LDPALLRPGR D+ + + ++A +L +L
Sbjct: 444 LDPALLRPGRFDKLVFVGANEDRASQLRVL 473
Score = 229 (85.7 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 57/167 (34%), Positives = 87/167 (52%)
Query: 267 TYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI 326
T+ +++ Y+G+S +RE+F AR PCIIF DE+D++ R G S +
Sbjct: 354 TFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGG-VM 412
Query: 327 QRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHT 386
R + +LL ++DG S V +I ATNRPD LDPALLRPGR D+ + + NE R +
Sbjct: 413 DRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGA-NED-RASQL 470
Query: 387 WPISIHAGPIAKHGEIDYEAVVKLSD-SFNGADLRNVCTEAGLFAIR 432
+S + V+ GADL ++C++A A++
Sbjct: 471 RVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALK 517
Score = 174 (66.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 58/199 (29%), Positives = 91/199 (45%)
Query: 505 VIEL-PLLNPELFQRVG--ITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIV 561
V EL +L P L Q G +T LL GPPG GKT + A SQL + LKV S++
Sbjct: 32 VSELCAVLKPRL-QPGGALLTGTSSVLLRGPPGCGKTTVVAAACSQLGLHLLKVPCSSLC 90
Query: 562 DKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQM 621
G ++ +F+ AR +P ++ + +D +G R +G D + L LL
Sbjct: 91 ADSSGAVETKLQAIFSRARRCRPAVLLLTAVDLLGRDR--DGLGEDARVVAALRHLLLDE 148
Query: 622 DGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAKHG 681
D +S + ++ T+R L PA ++ ++E+P +E RL IL+ + H
Sbjct: 149 DPLNSCPPLMVVATTSRAQDL-PADVQTA-FPHELEVPALSEGQRLSILRA----LTAHL 202
Query: 682 EIGDAATKWVLPFTAGGFI 700
+G L GF+
Sbjct: 203 PLGQEVNLAQLARRCAGFV 221
Score = 160 (61.4 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 34/69 (49%), Positives = 48/69 (69%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+++ +GGL E +E+ E I+LPL +PEL +G+ G LL+GPPGTGKTLLA+AVA+
Sbjct: 292 VSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRR-SGLLLHGPPGTGKTLLAKAVAT 349
Query: 228 QLDANFLKV 236
+ FL V
Sbjct: 350 ECSLTFLSV 358
Score = 88 (36.0 bits), Expect = 5.7e-40, Sum P(2) = 5.7e-40
Identities = 29/71 (40%), Positives = 35/71 (49%)
Query: 175 GLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFL 234
GL + EL V++ P L P +T LL GPPG GKT + A SQL + L
Sbjct: 27 GLEALVSELCAVLK-PRLQPG---GALLTGTSSVLLRGPPGCGKTTVVAAACSQLGLHLL 82
Query: 235 KV-VSSLFVTS 244
KV SSL S
Sbjct: 83 KVPCSSLCADS 93
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 414 (150.8 bits), Expect = 7.6e-36, P = 7.6e-36
Identities = 79/178 (44%), Positives = 119/178 (66%)
Query: 497 ESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 556
++KL+ + V++ L NP+ + +G PKGCLL GPPGTGKTLLARAVA + F
Sbjct: 257 QAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCA 315
Query: 557 SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLME 616
+S V+ ++G A +R++F A++ PCI+F+DEIDA+G +R + + E ++T+ +
Sbjct: 316 ASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQ 375
Query: 617 LLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
LL +MDGF V ++ ATNRPD LD ALLRPGR DR++ + P+ R++ILK+H+
Sbjct: 376 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHS 433
Score = 332 (121.9 bits), Expect = 9.6e-40, Sum P(2) = 9.6e-40
Identities = 67/184 (36%), Positives = 113/184 (61%)
Query: 270 PFYSSA---IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI 326
PF+S A V+ ++G A +R++F A++ PCI+F+DEIDA+G +R + + E
Sbjct: 310 PFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDER 369
Query: 327 QRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHT 386
++T+ +LL +MDGF V ++ ATNRPD LD ALLRPGR DR++ + P+ R+
Sbjct: 370 EQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQI- 428
Query: 387 WPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKA 446
+ +H+ A ++DYE V + + F GADL+N+ EA + A R E + +++++ A
Sbjct: 429 --LKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDA 486
Query: 447 VRKV 450
+ ++
Sbjct: 487 LERI 490
Score = 171 (65.3 bits), Expect = 9.6e-40, Sum P(2) = 9.6e-40
Identities = 35/75 (46%), Positives = 47/75 (62%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+T+ + G + EL+EV++ L NP+ + +G PKGCLL GPPGTGKTLLARAVA
Sbjct: 247 VTFGDVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 305
Query: 228 QLDANFLKVVSSLFV 242
+ F +S FV
Sbjct: 306 EAGVPFFSCAASEFV 320
>UNIPROTKB|A7YSY2 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 eggNOG:COG0464 HOGENOM:HOG000223225
GeneTree:ENSGT00700000104502 GO:GO:0017111 HOVERGEN:HBG001226
EMBL:BC114696 IPI:IPI00693499 RefSeq:NP_001099095.1
UniGene:Bt.21280 ProteinModelPortal:A7YSY2 PRIDE:A7YSY2
Ensembl:ENSBTAT00000024327 GeneID:533070 KEGG:bta:533070 CTD:79029
InParanoid:A7YSY2 OMA:TWEQIGG OrthoDB:EOG42RD70 NextBio:20875900
Uniprot:A7YSY2
Length = 767
Score = 330 (121.2 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 97/298 (32%), Positives = 157/298 (52%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+ + IGGL + +L++ IE PL P F R+G+T PKG LLYGPPG KT L RA+A+
Sbjct: 463 VGWEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALAT 522
Query: 228 QLDANFLKVVSS-LFVTSKEDMAILMGNQLKRRSTHHLEKTYFPFYSSAIVDKYIGESAR 286
+F+ V + LF D ++ +Q+ R++ + F +D +G S
Sbjct: 523 SCRCSFVSVSGADLFSPFVGDSEKIL-SQVFRQARANTPAIVF----LDEIDSILG-SRS 576
Query: 287 LIREMFNYARNHQPCIIFMDEIDAIGGRRFSE-GTSADREIQRTLMELLNQMDGFDSL-- 343
+ R N + + ++E+D +G + G+ +D+ + +E +++ F +
Sbjct: 577 ISRTECNV--QDRVLSVLLNELDGVGLKTIERRGSKSDQHGKCKQLEKNEELE-FQEIFN 633
Query: 344 GQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEID 403
V ++ ATNRPD LD ALLRPGRLD+ I IP P+E+ RL+ + P+ ++
Sbjct: 634 SNVIVVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLS-ILKVCTKNTPMGP--DVS 690
Query: 404 YEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVT---QEDFMKAVRKVSDNKKLDH 458
E V + F+GADL N+C EA L A++ VT QE F+++++ V + L H
Sbjct: 691 LEKVAAETCFFSGADLGNLCKEAALLALQENGLEVTTVKQEHFLESLKTVKPS--LSH 746
Score = 295 (108.9 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 67/184 (36%), Positives = 102/184 (55%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ ++ LPL P +G+ P+G LL GPPG GKT L RAVA + A L V + A+
Sbjct: 213 RELLRLPLRYPRALASLGLEVPRGVLLAGPPGVGKTQLVRAVARETGAELLAVSAPALQG 272
Query: 563 KYIGESARLIREMFNYAR---NHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 619
GE+ +R +F AR + +P ++F+DE+DA+ RR G R + ++L
Sbjct: 273 ARPGETEENVRRIFKRARELASRRPTLLFLDEVDALCPRR---GGPHQAPESRVVAQVLT 329
Query: 620 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIAK 679
+DG +V ++ +TNRPD LDPAL RPGR DR++ I P + R IL++ +
Sbjct: 330 LLDGIGEDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLRQRKAILQVITSKMPI 389
Query: 680 HGEI 683
G++
Sbjct: 390 SGQV 393
Score = 272 (100.8 bits), Expect = 7.5e-31, Sum P(2) = 7.5e-31
Identities = 74/225 (32%), Positives = 119/225 (52%)
Query: 400 GEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI-RSEREYVTQEDFMKAVRKVSDNKKLDH 458
G++D + +++ + GADL +C EA + A+ SE+ + + KK+
Sbjct: 391 GQVDLNLLAEMTVGYVGADLTALCREAAMQALLHSEKNQ--DNPTIDETDFLEAFKKIQP 448
Query: 459 CNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKPVIELPLLNPELFQR 518
+S+R+ G+ I+ V E + + D KL K IE PL P F R
Sbjct: 449 -SSFRSVIGVTDIKP----VGWEQ----IGGLED-----VKLKLKQSIEWPLKFPREFVR 494
Query: 519 VGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNY 578
+G+T PKG LLYGPPG KT L RA+A+ +F+ V + + ++G+S +++ ++F
Sbjct: 495 MGLTQPKGVLLYGPPGCAKTTLVRALATSCRCSFVSVSGADLFSPFVGDSEKILSQVFRQ 554
Query: 579 ARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 623
AR + P I+F+DEID+I G R T + + R L LLN++DG
Sbjct: 555 ARANTPAIVFLDEIDSILGSRSISRTECNVQ-DRVLSVLLNELDG 598
Score = 233 (87.1 bits), Expect = 1.5e-39, Sum P(3) = 1.5e-39
Identities = 59/177 (33%), Positives = 99/177 (55%)
Query: 282 GESARLIREMFNYAR---NHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 338
GE+ +R +F AR + +P ++F+DE+DA+ RR G R + ++L +D
Sbjct: 276 GETEENVRRIFKRARELASRRPTLLFLDEVDALCPRR---GGPHQAPESRVVAQVLTLLD 332
Query: 339 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAK 398
G +V ++ +TNRPD LDPAL RPGR DR++ I P + R A I+ PI+
Sbjct: 333 GIGEDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLRQRKAILQVITSKM-PIS- 390
Query: 399 HGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI-RSEREY----VTQEDFMKAVRKV 450
G++D + +++ + GADL +C EA + A+ SE+ + + DF++A +K+
Sbjct: 391 -GQVDLNLLAEMTVGYVGADLTALCREAAMQALLHSEKNQDNPTIDETDFLEAFKKI 446
Score = 170 (64.9 bits), Expect = 1.5e-39, Sum P(3) = 1.5e-39
Identities = 51/159 (32%), Positives = 82/159 (51%)
Query: 518 RVGITPPKGCLLYGP-PGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMF 576
R G L+ P G + +L++ V Q AN +V +D +G S + R
Sbjct: 525 RCSFVSVSGADLFSPFVGDSEKILSQ-VFRQARANTPAIVFLDEIDSILG-SRSISRTEC 582
Query: 577 NYARNHQPCIIFMDEIDAIGGRRFSE-GTSADREIQRTLMELLNQMDGFDSL--GQVKMI 633
N + + ++E+D +G + G+ +D+ + +E +++ F + V ++
Sbjct: 583 NV--QDRVLSVLLNELDGVGLKTIERRGSKSDQHGKCKQLEKNEELE-FQEIFNSNVIVV 639
Query: 634 MATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKI 672
ATNRPD LD ALLRPGRLD+ I IP P+E+ RL ILK+
Sbjct: 640 AATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKV 678
Score = 152 (58.6 bits), Expect = 1.5e-39, Sum P(3) = 1.5e-39
Identities = 32/64 (50%), Positives = 39/64 (60%)
Query: 173 IGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDAN 232
+GGLSE LRE++ LPL P +G+ P+G LL GPPG GKT L RAVA + A
Sbjct: 202 LGGLSEAADSLRELLRLPLRYPRALASLGLEVPRGVLLAGPPGVGKTQLVRAVARETGAE 261
Query: 233 FLKV 236
L V
Sbjct: 262 LLAV 265
Score = 40 (19.1 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 358 LDPALLRP--GRLDRKIEIPLPNEQARLAHTWP 388
L P LR L ++I LP+ + L WP
Sbjct: 31 LGPTALRALGAHLGSAVKISLPDGGSCLCTAWP 63
>UNIPROTKB|J3KRP2 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031595 "nuclear proteasome complex"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003959 Pfam:PF00004
GO:GO:0005524 EMBL:AC015651 ChiTaRS:PSMC5 HGNC:HGNC:9552
Ensembl:ENST00000584320 Uniprot:J3KRP2
Length = 241
Score = 326 (119.8 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 85/205 (41%), Positives = 116/205 (56%)
Query: 43 KQYDKSENDLKALQS-VGQHDLLLHCVREQLKELTKQYDKSENDLKALQS----VGQVSL 97
+QY S+ ++ LQ V L ++ Q EL + +L+ LQ VG+V
Sbjct: 13 RQYYLSK--IEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVR 70
Query: 98 STSVSKCWTVIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLV 157
+ K V+VK ++VV + +D + RVAL + T+ + LP +VDPLV
Sbjct: 71 AMDKKK---VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLV 127
Query: 158 YNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTG 217
M E D TY IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTG
Sbjct: 128 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 187
Query: 218 KTLLARAVASQLDANFLKVVSSLFV 242
KTLLARAVA D F++V S V
Sbjct: 188 KTLLARAVAHHTDCTFIRVSGSELV 212
Score = 293 (108.2 bits), Expect = 5.9e-27, Sum P(2) = 5.9e-27
Identities = 56/90 (62%), Positives = 68/90 (75%)
Query: 501 DYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 560
+ K VIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA D F++V S +
Sbjct: 152 EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 211
Query: 561 VDKYIGESARLIREMFNYARNHQPCIIFMD 590
V K+IGE AR++RE+F AR H P IIFMD
Sbjct: 212 VQKFIGEGARMVRELFVMAREHAPSIIFMD 241
Score = 129 (50.5 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMD 306
L R HH + T+ S +V K+IGE AR++RE+F AR H P IIFMD
Sbjct: 191 LARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMD 241
Score = 44 (20.5 bits), Expect = 5.9e-27, Sum P(2) = 5.9e-27
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 15 QDYRKKLTEHAEVEGRLREMREQLKELTKQ 44
Q+ R+ + E+ ++R +RE+L+ L +Q
Sbjct: 32 QNLRRLQAQRNELNAKVRLLREELQLLQEQ 61
>DICTYBASE|DDB_G0282215 [details] [associations]
symbol:DDB_G0282215 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282215 GO:GO:0005524 GO:GO:0017111
EMBL:AAFI02000046 RefSeq:XP_640290.2 ProteinModelPortal:Q54SU5
EnsemblProtists:DDB0267128 GeneID:8623467 KEGG:ddi:DDB_G0282215
OMA:PNINFIS Uniprot:Q54SU5
Length = 534
Score = 426 (155.0 bits), Expect = 2.6e-39, P = 2.6e-39
Identities = 125/412 (30%), Positives = 205/412 (49%)
Query: 282 GESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 341
G++ +LI +FN A + P ++ +EID+I R S QR + L ++
Sbjct: 73 GDTEKLIESIFNTASSQSPFVLVFEEIDSISQIR---NDSLGYIEQRVVSNFLTLLENNS 129
Query: 342 SLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGE 401
V +I T+R +++D A G+ D + +P+P+ R + + P K+ E
Sbjct: 130 KKRSVFVIGVTSRIESIDTAFFSIGKFDSVLNLPIPSPNDRKEILY-LLFKKFPNFKNNE 188
Query: 402 IDY----EAVVKLSDSFNGADLRNVCTEAGLFAIRSE--REY--VTQEDFMKAVRKVSDN 453
I Y E + + + + G+DL ++C EA L I+ +Y + + DF KA V
Sbjct: 189 IHYKELSEYLGECTHGYVGSDLNSLCKEAILVNIKRNDCHDYNLIEKFDFNKAFELV--- 245
Query: 454 KKLDHCNSYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKPVIELPLLNP 513
K N Y+ + F ++ ++ K+ K I P+LN
Sbjct: 246 -KPSILNQYKLPTIGYGDGGGNG--NGNGF----NEIGGLDEIIEKI--KSSILTPMLNK 296
Query: 514 ELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL-DANFLKVVSSAIVDKYIGESARLI 572
+ R+GI P G LLYGPPG GK+L+ARA+AS + NF+ + S+ I+D +G S + +
Sbjct: 297 SVLDRLGIKSPSGVLLYGPPGNGKSLIARAIASSSPNINFISISSTDIIDPVVGASEKNL 356
Query: 573 REMFNYARNHQPCIIFMDEIDAIGGRR-FSEGTSADREIQRTLMELLNQMDGF------- 624
++F R PCI+F+D+++ + R F + S+++ R L LL ++DG
Sbjct: 357 SKLFKTLRESSPCILFLDQVEVLAKLRGFDD--SSEQSSDRLLSCLLTEIDGIYGGGGSG 414
Query: 625 -----DSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 671
++ Q ++ AT R D LDP++LRPGR D IEIP PN++ARL+I K
Sbjct: 415 NNNNNNNSNQSIVLAATTRIDLLDPSILRPGRFDYHIEIPNPNKEARLDIFK 466
Score = 249 (92.7 bits), Expect = 9.2e-31, Sum P(2) = 9.2e-31
Identities = 64/199 (32%), Positives = 111/199 (55%)
Query: 273 SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR-FSEGTSADREIQRTLM 331
S+ I+D +G S + + ++F R PCI+F+D+++ + R F + S+++ R L
Sbjct: 341 STDIIDPVVGASEKNLSKLFKTLRESSPCILFLDQVEVLAKLRGFDD--SSEQSSDRLLS 398
Query: 332 ELLNQMDGF------------DSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE 379
LL ++DG ++ Q ++ AT R D LDP++LRPGR D IEIP PN+
Sbjct: 399 CLLTEIDGIYGGGGSGNNNNNNNSNQSIVLAATTRIDLLDPSILRPGRFDYHIEIPNPNK 458
Query: 380 QARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREY-- 437
+ARL I+ + P+ + +D+ + +L+ FNGAD+ N+C E L A+R++
Sbjct: 459 EARLDIFKKIT-KSMPLDE--SVDFIQLSELTQGFNGADINNLCKETALLALRNDININN 515
Query: 438 VTQEDFMKAVR--KVSDNK 454
++ +F+ A++ K S K
Sbjct: 516 ISMSNFLDALKFTKSSSTK 534
Score = 169 (64.5 bits), Expect = 9.2e-31, Sum P(2) = 9.2e-31
Identities = 33/71 (46%), Positives = 48/71 (67%)
Query: 170 YSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQL 229
++ IGGL E I +++ I P+LN + R+GI P G LLYGPPG GK+L+ARA+AS
Sbjct: 272 FNEIGGLDEIIEKIKSSILTPMLNKSVLDRLGIKSPSGVLLYGPPGNGKSLIARAIASSS 331
Query: 230 -DANFLKVVSS 239
+ NF+ + S+
Sbjct: 332 PNINFISISST 342
Score = 120 (47.3 bits), Expect = 0.00091, P = 0.00091
Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 566 GESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 625
G++ +LI +FN A + P ++ +EID+I R S QR + L ++
Sbjct: 73 GDTEKLIESIFNTASSQSPFVLVFEEIDSISQIR---NDSLGYIEQRVVSNFLTLLENNS 129
Query: 626 SLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKI--HAGPIAKHGEI 683
V +I T+R +++D A G+ D + +P+P+ R EIL + P K+ EI
Sbjct: 130 KKRSVFVIGVTSRIESIDTAFFSIGKFDSVLNLPIPSPNDRKEILYLLFKKFPNFKNNEI 189
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 389 (142.0 bits), Expect = 2.3e-33, P = 2.3e-33
Identities = 81/178 (45%), Positives = 116/178 (65%)
Query: 497 ESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 556
E+K + +++ L + + FQ++G PKGCLL G PGTGKTLLARA+A + + F +
Sbjct: 163 EAKEELIEIVDF-LKHRQRFQKLGGKIPKGCLLIGSPGTGKTLLARAIAGEANVPFFSIS 221
Query: 557 SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR-FSEGTSADREIQRTLM 615
S V+ ++G A +R+MF + + PCIIF+DEIDA+G R G D E ++TL
Sbjct: 222 GSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGRHRGIGLGGGND-EREQTLN 280
Query: 616 ELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
+LL +MDGF+S V +I ATNRPD LD ALLRPGR DR++ I +P+ R +I+ +H
Sbjct: 281 QLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFDRQVTISIPDINGREKIINVH 338
Score = 329 (120.9 bits), Expect = 2.9e-39, Sum P(2) = 2.9e-39
Identities = 76/185 (41%), Positives = 109/185 (58%)
Query: 270 PFYS---SAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR-FSEGTSADRE 325
PF+S S V+ ++G A +R+MF + + PCIIF+DEIDA+G R G D E
Sbjct: 216 PFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGRHRGIGLGGGND-E 274
Query: 326 IQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAH 385
++TL +LL +MDGF+S V +I ATNRPD LD ALLRPGR DR++ I +P+ R
Sbjct: 275 REQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFDRQVTISIPDINGREKI 334
Query: 386 TWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMK 445
I++H + +++ + + + F+GADL N+ EA L A R ++ VT DF
Sbjct: 335 ---INVHIKKVPTAPDVNIRTIARGTPGFSGADLANLVNEAALIAARLNKKIVTMSDFEY 391
Query: 446 AVRKV 450
A KV
Sbjct: 392 ARDKV 396
Score = 166 (63.5 bits), Expect = 2.9e-39, Sum P(2) = 2.9e-39
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 163 EDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLA 222
E+ +T++ + G+ E EL E+++ L + + FQ++G PKGCLL G PGTGKTLLA
Sbjct: 148 ENRNKVTFNDVAGIDEAKEELIEIVDF-LKHRQRFQKLGGKIPKGCLLIGSPGTGKTLLA 206
Query: 223 RAVASQLDANFLKVVSSLFV 242
RA+A + + F + S FV
Sbjct: 207 RAIAGEANVPFFSISGSDFV 226
Score = 46 (21.3 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 465 EAGLFAIRSEREYVTQEDFMKAVRKV 490
EA L A R ++ VT DF A KV
Sbjct: 371 EAALIAARLNKKIVTMSDFEYARDKV 396
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 389 (142.0 bits), Expect = 2.3e-33, P = 2.3e-33
Identities = 81/178 (45%), Positives = 116/178 (65%)
Query: 497 ESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 556
E+K + +++ L + + FQ++G PKGCLL G PGTGKTLLARA+A + + F +
Sbjct: 163 EAKEELIEIVDF-LKHRQRFQKLGGKIPKGCLLIGSPGTGKTLLARAIAGEANVPFFSIS 221
Query: 557 SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR-FSEGTSADREIQRTLM 615
S V+ ++G A +R+MF + + PCIIF+DEIDA+G R G D E ++TL
Sbjct: 222 GSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGRHRGIGLGGGND-EREQTLN 280
Query: 616 ELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH 673
+LL +MDGF+S V +I ATNRPD LD ALLRPGR DR++ I +P+ R +I+ +H
Sbjct: 281 QLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFDRQVTISIPDINGREKIINVH 338
Score = 329 (120.9 bits), Expect = 2.9e-39, Sum P(2) = 2.9e-39
Identities = 76/185 (41%), Positives = 109/185 (58%)
Query: 270 PFYS---SAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR-FSEGTSADRE 325
PF+S S V+ ++G A +R+MF + + PCIIF+DEIDA+G R G D E
Sbjct: 216 PFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGRHRGIGLGGGND-E 274
Query: 326 IQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAH 385
++TL +LL +MDGF+S V +I ATNRPD LD ALLRPGR DR++ I +P+ R
Sbjct: 275 REQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFDRQVTISIPDINGREKI 334
Query: 386 TWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMK 445
I++H + +++ + + + F+GADL N+ EA L A R ++ VT DF
Sbjct: 335 ---INVHIKKVPTAPDVNIRTIARGTPGFSGADLANLVNEAALIAARLNKKIVTMSDFEY 391
Query: 446 AVRKV 450
A KV
Sbjct: 392 ARDKV 396
Score = 166 (63.5 bits), Expect = 2.9e-39, Sum P(2) = 2.9e-39
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 163 EDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLA 222
E+ +T++ + G+ E EL E+++ L + + FQ++G PKGCLL G PGTGKTLLA
Sbjct: 148 ENRNKVTFNDVAGIDEAKEELIEIVDF-LKHRQRFQKLGGKIPKGCLLIGSPGTGKTLLA 206
Query: 223 RAVASQLDANFLKVVSSLFV 242
RA+A + + F + S FV
Sbjct: 207 RAIAGEANVPFFSISGSDFV 226
Score = 46 (21.3 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 465 EAGLFAIRSEREYVTQEDFMKAVRKV 490
EA L A R ++ VT DF A KV
Sbjct: 371 EAALIAARLNKKIVTMSDFEYARDKV 396
>SGD|S000003502 [details] [associations]
symbol:YTA7 "Protein that localizes to chromatin and
regulates histone expression" species:4932 "Saccharomyces
cerevisiae" [GO:0042393 "histone binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0031936 "negative regulation of chromatin silencing"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IMP;IDA]
[GO:0042406 "extrinsic to endoplasmic reticulum membrane"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 SGD:S000003502
GO:GO:0005524 GO:GO:0005634 EMBL:BK006941 GO:GO:0045944
GO:GO:0003682 GO:GO:0000122 GO:GO:0031936 eggNOG:COG0464
GO:GO:0017111 GO:GO:0042393 GO:GO:0042406 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 EMBL:Y07893 EMBL:X81072
GeneTree:ENSGT00550000074694 EMBL:Z73055 PIR:S64603
RefSeq:NP_011786.1 ProteinModelPortal:P40340 SMR:P40340
DIP:DIP-6557N IntAct:P40340 MINT:MINT-629064 STRING:P40340
PaxDb:P40340 EnsemblFungi:YGR270W GeneID:853186 KEGG:sce:YGR270W
CYGD:YGR270w HOGENOM:HOG000157282 OMA:YPELYQN OrthoDB:EOG473T0K
NextBio:973329 Genevestigator:P40340 GermOnline:YGR270W
Uniprot:P40340
Length = 1379
Score = 407 (148.3 bits), Expect = 3.2e-33, Sum P(2) = 3.2e-33
Identities = 87/183 (47%), Positives = 120/183 (65%)
Query: 496 LESKLDY-KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 554
L++ +D K ++ LPLL PEL+Q ITPP+G L +GPPGTGKTL+ARA+A+ ++ K
Sbjct: 418 LDNYIDQLKEMVALPLLYPELYQNFNITPPRGVLFHGPPGTGKTLMARALAASCSSDERK 477
Query: 555 VV-----SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADRE 609
+ + I+ K++GE+ R +R +F A+ HQP IIF DEID + R S+
Sbjct: 478 ITFFMRKGADILSKWVGEAERQLRLLFEEAKKHQPSIIFFDEIDGLAPVRSSKQEQIHAS 537
Query: 610 IQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEI 669
I TL+ L MDG D+ GQV +I ATNRPD +DPAL RPGR DR+ PLP+ +AR +I
Sbjct: 538 IVSTLLAL---MDGMDNRGQVIVIGATNRPDAVDPALRRPGRFDREFYFPLPDVKARFKI 594
Query: 670 LKI 672
L+I
Sbjct: 595 LQI 597
Score = 296 (109.3 bits), Expect = 3.2e-39, Sum P(5) = 3.2e-39
Identities = 72/168 (42%), Positives = 100/168 (59%)
Query: 267 TYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI 326
T+F + I+ K++GE+ R +R +F A+ HQP IIF DEID + R S+ I
Sbjct: 479 TFFMRKGADILSKWVGEAERQLRLLFEEAKKHQPSIIFFDEIDGLAPVRSSKQEQIHASI 538
Query: 327 QRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHT 386
TL+ L MDG D+ GQV +I ATNRPD +DPAL RPGR DR+ PLP+ +AR
Sbjct: 539 VSTLLAL---MDGMDNRGQVIVIGATNRPDAVDPALRRPGRFDREFYFPLPDVKARFK-I 594
Query: 387 WPISIH--AGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIR 432
I + P++ + ID A L+ + GADLR++CTEA L +I+
Sbjct: 595 LQIQTRKWSSPLSTNF-IDKLAF--LTKGYGGADLRSLCTEAALISIQ 639
Score = 197 (74.4 bits), Expect = 3.2e-39, Sum P(5) = 3.2e-39
Identities = 39/85 (45%), Positives = 58/85 (68%)
Query: 152 EVDPLVYNMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLY 211
++DPL +M+ + + IGGL I +L+E++ LPLL PEL+Q ITPP+G L +
Sbjct: 400 DLDPLGVDMN------VNFDDIGGLDNYIDQLKEMVALPLLYPELYQNFNITPPRGVLFH 453
Query: 212 GPPGTGKTLLARAVASQLDANFLKV 236
GPPGTGKTL+ARA+A+ ++ K+
Sbjct: 454 GPPGTGKTLMARALAASCSSDERKI 478
Score = 68 (29.0 bits), Expect = 3.2e-39, Sum P(5) = 3.2e-39
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 521 ITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIR----EMF 576
I P+ L+ GP G G+ + A+ + L+ F V + + + ES+R I + F
Sbjct: 767 ICKPR-LLINGPKGNGQQYVGAAILNYLE-EFN--VQNLDLASLVSESSRTIEAAVVQSF 822
Query: 577 NYARNHQPCIIFMDEID 593
A+ QP ++F+ +D
Sbjct: 823 MEAKKRQPSVVFIPNLD 839
Score = 46 (21.3 bits), Expect = 3.6e-10, Sum P(3) = 3.6e-10
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 281 IGESARLIR----EMFNYARNHQPCIIFMDEID 309
+ ES+R I + F A+ QP ++F+ +D
Sbjct: 807 VSESSRTIEAAVVQSFMEAKKRQPSVVFIPNLD 839
Score = 44 (20.5 bits), Expect = 3.2e-39, Sum P(5) = 3.2e-39
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 462 YRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKPVIEL--PLLNPEL 515
YR+ L S+ + V DFM A++K+ + + +P+ EL PLL +L
Sbjct: 646 YRSNDKLLVDPSKIK-VKVSDFMLALKKIVPSSARSTGSSPQPLPELIKPLLADQL 700
Score = 40 (19.1 bits), Expect = 3.2e-33, Sum P(2) = 3.2e-33
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 159 NMSHEDPGDITYSAIGGLSEQIRELRE 185
N ++D D + + L+++IREL+E
Sbjct: 231 NEENDDENDNSRNEALTLADEIRELQE 257
Score = 39 (18.8 bits), Expect = 3.2e-39, Sum P(5) = 3.2e-39
Identities = 9/39 (23%), Positives = 21/39 (53%)
Query: 625 DSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE 663
+++ VK I + N+P++L + +++ P+P E
Sbjct: 1274 NNINHVKEIQSVNKPNSLHETV------EKRERSPIPKE 1306
Score = 39 (18.8 bits), Expect = 3.6e-10, Sum P(3) = 3.6e-10
Identities = 9/39 (23%), Positives = 21/39 (53%)
Query: 341 DSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNE 379
+++ VK I + N+P++L + +++ P+P E
Sbjct: 1274 NNINHVKEIQSVNKPNSLHETV------EKRERSPIPKE 1306
>RGD|1595990 [details] [associations]
symbol:Spata5l1 "spermatogenesis associated 5-like 1"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1595990 GO:GO:0005524 GeneTree:ENSGT00700000104502
GO:GO:0017111 EMBL:CH473949 CTD:79029 OrthoDB:EOG42RD70
IPI:IPI00357915 RefSeq:NP_001103117.1 UniGene:Rn.151898
Ensembl:ENSRNOT00000043414 GeneID:691729 KEGG:rno:691729
UCSC:RGD:1595990 NextBio:743659 Uniprot:D4A2B7
Length = 747
Score = 293 (108.2 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 71/187 (37%), Positives = 104/187 (55%)
Query: 503 KPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 562
+ ++ LPL P +G+ P+G LL GPPG GKT L RAVA + A L V + A+
Sbjct: 206 RELLRLPLCYPLALAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQG 265
Query: 563 KYIGESARLIREMFNYAR---NHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 619
GE+ +R +F A+ + P ++F+DE+DA+ RR G E R + ++L
Sbjct: 266 TRPGETEENVRRVFQRAQELASRGPSLLFLDEVDALCPRR--GGPQRAPE-SRVVAQVLT 322
Query: 620 QMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAG--PI 677
+DG +V ++ ATNRPD LDPAL RPGR DR++ I P + R IL + PI
Sbjct: 323 LLDGIHGDREVVVVGATNRPDELDPALRRPGRFDREVIIGTPTLKQREAILGVITSKMPI 382
Query: 678 AKHGEIG 684
+ H ++G
Sbjct: 383 SSHIDLG 389
Score = 277 (102.6 bits), Expect = 8.1e-33, Sum P(2) = 8.1e-33
Identities = 74/223 (33%), Positives = 122/223 (54%)
Query: 402 IDYEAVVKLSDSFNGADLRNVCTEAGLFAI-RSEREYVTQEDFMKAVRKVSDNKKLDHCN 460
ID + +++ + GADL +C EA A+ ++E+ + ++ + KK+ +
Sbjct: 386 IDLGLLAEMTVGYVGADLTALCREAATCALLKNEKNQNNPK--IEETDFLEAFKKVQP-S 442
Query: 461 SYRTEAGLFAIRSEREYVTQEDFMKAVRKVSDNKKLESKLDYKPVIELPLLNPELFQRVG 520
S+R+ GL IR V E + + D KL K +E PL P+ F R+G
Sbjct: 443 SFRSSIGLTDIRP----VGWEQ----IGGLED-----VKLKLKQCVEWPLKFPQEFARMG 489
Query: 521 ITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYAR 580
+T PKG LLYGPPG KT L RA+A+ +F+ V + + ++G+S +++ ++F AR
Sbjct: 490 LTQPKGLLLYGPPGCAKTTLVRALATSCHCSFVSVCGADLFSPFVGDSEKVLSQVFRQAR 549
Query: 581 NHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 623
+ P ++F+DEID++ G R S G+S +R L LLN++DG
Sbjct: 550 ANTPALVFLDEIDSVLGSR-SVGSSGCDARERVLSVLLNELDG 591
Score = 229 (85.7 bits), Expect = 3.6e-39, Sum P(3) = 3.6e-39
Identities = 67/199 (33%), Positives = 107/199 (53%)
Query: 282 GESARLIREMFNYAR---NHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMD 338
GE+ +R +F A+ + P ++F+DE+DA+ RR G E R + ++L +D
Sbjct: 269 GETEENVRRVFQRAQELASRGPSLLFLDEVDALCPRR--GGPQRAPE-SRVVAQVLTLLD 325
Query: 339 GFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAK 398
G +V ++ ATNRPD LDPAL RPGR DR++ I P + R A I+ PI+
Sbjct: 326 GIHGDREVVVVGATNRPDELDPALRRPGRFDREVIIGTPTLKQREAILGVITSKM-PISS 384
Query: 399 HGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAI-RSEREY----VTQEDFMKAVRKVSDN 453
H ID + +++ + GADL +C EA A+ ++E+ + + DF++A +KV +
Sbjct: 385 H--IDLGLLAEMTVGYVGADLTALCREAATCALLKNEKNQNNPKIEETDFLEAFKKVQPS 442
Query: 454 KKLDHCNSYRTEAGLFAIR 472
S+R+ GL IR
Sbjct: 443 -------SFRSSIGLTDIR 454
Score = 208 (78.3 bits), Expect = 4.9e-26, Sum P(2) = 4.9e-26
Identities = 56/164 (34%), Positives = 89/164 (54%)
Query: 303 IFMDEIDAIGGRRFSE-GTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPA 361
+ ++E+D +G R G+ A Q+ E+L++ V +++ATNRPD LD A
Sbjct: 584 VLLNELDGVGVRTVERRGSKAS---QQECQEILSR--------SVMIVVATNRPDVLDDA 632
Query: 362 LLRPGRLDRKIEIPLPNEQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRN 421
LLRPGRLD+ + +P P+ + RL+ + + PI + + E + + F+GADLRN
Sbjct: 633 LLRPGRLDKMVYVPPPDREGRLS-ILKVCTNNMPIGLN--VSLENLAAETCYFSGADLRN 689
Query: 422 VCTEAGLFAIRS---EREYVTQEDFMKAVRKVSDNKKLDHCNSY 462
+C EA LFA++ E V QE F +A++ V + L Y
Sbjct: 690 LCKEAALFALQENGLEATTVEQEHFTEALKTVKPSLTLKDLTFY 733
Score = 173 (66.0 bits), Expect = 4.9e-26, Sum P(2) = 4.9e-26
Identities = 52/185 (28%), Positives = 87/185 (47%)
Query: 151 REVDPLVYNMSH--EDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGC 208
++V P + S D + + IGGL + +L++ +E PL P+ F R+G+T PKG
Sbjct: 437 KKVQPSSFRSSIGLTDIRPVGWEQIGGLEDVKLKLKQCVEWPLKFPQEFARMGLTQPKGL 496
Query: 209 LLYGPPGTGKTLLARAVASQLDANFLKVVSS-LFVTSKEDMAILMGNQLKRRSTHHLEKT 267
LLYGPPG KT L RA+A+ +F+ V + LF D ++ ++ +
Sbjct: 497 LLYGPPGCAKTTLVRALATSCHCSFVSVCGADLFSPFVGDSEKVLSQVFRQARANTPALV 556
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSE-GTSADR-E 325
+ S + + +G S RE + + ++E+D +G R G+ A + E
Sbjct: 557 FLDEIDSVLGSRSVGSSGCDARE--------RVLSVLLNELDGVGVRTVERRGSKASQQE 608
Query: 326 IQRTL 330
Q L
Sbjct: 609 CQEIL 613
Score = 165 (63.1 bits), Expect = 3.6e-39, Sum P(3) = 3.6e-39
Identities = 36/74 (48%), Positives = 45/74 (60%)
Query: 163 EDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLA 222
E PG++T +GGLSE LRE++ LPL P +G+ P+G LL GPPG GKT L
Sbjct: 188 EPPGEVT---LGGLSETADSLRELLRLPLCYPLALAALGLAVPRGVLLAGPPGVGKTQLV 244
Query: 223 RAVASQLDANFLKV 236
RAVA + A L V
Sbjct: 245 RAVAREAGAELLAV 258
Score = 157 (60.3 bits), Expect = 3.6e-39, Sum P(3) = 3.6e-39
Identities = 49/149 (32%), Positives = 79/149 (53%)
Query: 526 GCLLYGP-PGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQP 584
G L+ P G + +L++ V Q AN +V +D +G +R + AR
Sbjct: 526 GADLFSPFVGDSEKVLSQ-VFRQARANTPALVFLDEIDSVLG--SRSVGSSGCDARERVL 582
Query: 585 CIIFMDEIDAIGGRRFSE-GTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLD 643
++ ++E+D +G R G+ A Q+ E+L++ V +++ATNRPD LD
Sbjct: 583 SVL-LNELDGVGVRTVERRGSKAS---QQECQEILSR--------SVMIVVATNRPDVLD 630
Query: 644 PALLRPGRLDRKIEIPLPNEQARLEILKI 672
ALLRPGRLD+ + +P P+ + RL ILK+
Sbjct: 631 DALLRPGRLDKMVYVPPPDREGRLSILKV 659
Score = 120 (47.3 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 23/60 (38%), Positives = 41/60 (68%)
Query: 280 YIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 339
++G+S +++ ++F AR + P ++F+DEID++ G R S G+S +R L LLN++DG
Sbjct: 533 FVGDSEKVLSQVFRQARANTPALVFLDEIDSVLGSR-SVGSSGCDARERVLSVLLNELDG 591
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 416 (151.5 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 88/199 (44%), Positives = 126/199 (63%)
Query: 499 KLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 558
K++ K +++ L +P+ FQR+G PKG LL GPPGTGKTLLARAVA + D FL + +S
Sbjct: 184 KMELKEIVDY-LRDPKKFQRIGGKVPKGVLLVGPPGTGKTLLARAVAGEADVTFLSISAS 242
Query: 559 AIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 618
++ ++G A +R++F A+ P IIF+DE+DA+G R + E ++TL +LL
Sbjct: 243 QFIEMFVGVGAGRVRDLFATAKKSAPSIIFIDELDAVGRSRGAGLGGGHDEREQTLNQLL 302
Query: 619 NQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGPIA 678
++MDGFDS +V ++ ATNRPD LDPALLRPGR DR + I P+ + R +IL +H I
Sbjct: 303 SEMDGFDSHDEVIVMAATNRPDVLDPALLRPGRFDRHVVIDRPDWRDREKILHVHTRKIP 362
Query: 679 KHGEIGDAATKWVLPFTAG 697
++ A P AG
Sbjct: 363 LDKDVDLAVIARGTPGMAG 381
Score = 310 (114.2 bits), Expect = 3.8e-39, Sum P(2) = 3.8e-39
Identities = 70/197 (35%), Positives = 108/197 (54%)
Query: 256 LKRRSTHHLEKTYFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRR 315
L R + T+ +S ++ ++G A +R++F A+ P IIF+DE+DA+G R
Sbjct: 224 LARAVAGEADVTFLSISASQFIEMFVGVGAGRVRDLFATAKKSAPSIIFIDELDAVGRSR 283
Query: 316 FSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIP 375
+ E ++TL +LL++MDGFDS +V ++ ATNRPD LDPALLRPGR DR + I
Sbjct: 284 GAGLGGGHDEREQTLNQLLSEMDGFDSHDEVIVMAATNRPDVLDPALLRPGRFDRHVVID 343
Query: 376 LPN--EQARLAHTWPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRS 433
P+ ++ ++ H +H I ++D + + + GADL N+ EA + A R
Sbjct: 344 RPDWRDREKILH-----VHTRKIPLDKDVDLAVIARGTPGMAGADLENLVNEAAILAARE 398
Query: 434 EREYVTQEDFMKAVRKV 450
VT E +A KV
Sbjct: 399 NAATVTMEHMERAKDKV 415
Score = 186 (70.5 bits), Expect = 3.8e-39, Sum P(2) = 3.8e-39
Identities = 36/75 (48%), Positives = 51/75 (68%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
+T+ + G+ EL+E+++ L +P+ FQR+G PKG LL GPPGTGKTLLARAVA
Sbjct: 172 VTFDDVAGMENPKMELKEIVDY-LRDPKKFQRIGGKVPKGVLLVGPPGTGKTLLARAVAG 230
Query: 228 QLDANFLKVVSSLFV 242
+ D FL + +S F+
Sbjct: 231 EADVTFLSISASQFI 245
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 401 (146.2 bits), Expect = 1.4e-34, P = 1.4e-34
Identities = 84/191 (43%), Positives = 122/191 (63%)
Query: 497 ESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 556
E+K + ++E L P FQ++G PKG L+ GPPGTGKTLLA+A+A + F +
Sbjct: 159 EAKEEVAELVEY-LREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTIS 217
Query: 557 SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLME 616
S V+ ++G A +R+MF A+ PCIIF+DEIDA+G +R + E ++TL +
Sbjct: 218 GSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQ 277
Query: 617 LLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAGP 676
+L +MDGF+ + +I ATNRPD LDPALLRPGR DR++ + LP+ + R +ILK+H
Sbjct: 278 MLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRR 337
Query: 677 IAKHGEIGDAA 687
+ +I DAA
Sbjct: 338 VPLAPDI-DAA 347
Score = 336 (123.3 bits), Expect = 5.8e-39, Sum P(2) = 5.8e-39
Identities = 72/183 (39%), Positives = 109/183 (59%)
Query: 268 YFPFYSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 327
+F S V+ ++G A +R+MF A+ PCIIF+DEIDA+G +R + E +
Sbjct: 213 FFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDERE 272
Query: 328 RTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHTW 387
+TL ++L +MDGF+ + +I ATNRPD LDPALLRPGR DR++ + LP+ + R
Sbjct: 273 QTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGR-EQIL 331
Query: 388 PISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKAV 447
+ + P+A +ID + + + F+GADL N+ EA LFA R + V+ +F KA
Sbjct: 332 KVHMRRVPLAP--DIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAK 389
Query: 448 RKV 450
K+
Sbjct: 390 DKI 392
Score = 157 (60.3 bits), Expect = 5.8e-39, Sum P(2) = 5.8e-39
Identities = 35/83 (42%), Positives = 48/83 (57%)
Query: 160 MSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKT 219
M ED T++ + G E E+ E++E L P FQ++G PKG L+ GPPGTGKT
Sbjct: 141 MLTEDQIKTTFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIPKGVLMVGPPGTGKT 199
Query: 220 LLARAVASQLDANFLKVVSSLFV 242
LLA+A+A + F + S FV
Sbjct: 200 LLAKAIAGEAKVPFFTISGSDFV 222
Score = 50 (22.7 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 465 EAGLFAIRSEREYVTQEDFMKAVRKV 490
EA LFA R + V+ +F KA K+
Sbjct: 367 EAALFAARGNKRVVSMVEFEKAKDKI 392
>DICTYBASE|DDB_G0284249 [details] [associations]
symbol:DDB_G0284249 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0044351 "macropinocytosis" evidence=RCA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284249 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:AAFI02000064 RefSeq:XP_638674.1 ProteinModelPortal:Q54PX1
SMR:Q54PX1 MEROPS:M41.A17 EnsemblProtists:DDB0229917 GeneID:8624503
KEGG:ddi:DDB_G0284249 InParanoid:Q54PX1 OMA:VSIYGMN
ProtClustDB:CLSZ2846729 Uniprot:Q54PX1
Length = 764
Score = 390 (142.3 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 85/199 (42%), Positives = 120/199 (60%)
Query: 479 TQEDFMKAVR--KVSDNKKL-ESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGT 535
T F K+ K SD L E+K++ + + L NP+ F +G P+G +L GPPGT
Sbjct: 288 TANKFEKSTSTVKFSDVAGLGEAKVEIEEFVNF-LKNPKKFHDIGAKIPRGAILVGPPGT 346
Query: 536 GKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAI 595
GKTL+A+A A + + F S V+ ++G +R++F AR + PCI+F+DEIDA+
Sbjct: 347 GKTLIAKATAGEANVPFYSTSGSDFVEMFVGVGPSRVRDLFEQARKNAPCIVFIDEIDAV 406
Query: 596 GGRRFSEGTSADR-EIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDR 654
G R G S E + TL +LL +MDGF L V ++ ATNRPD LD ALLRPGR DR
Sbjct: 407 GRARGKGGFSGSNDERENTLNQLLVEMDGFKPLKNVVVLAATNRPDILDKALLRPGRFDR 466
Query: 655 KIEIPLPNEQARLEILKIH 673
+I I P+ ++R EI ++H
Sbjct: 467 QITIDNPDLKSREEIFRVH 485
Score = 349 (127.9 bits), Expect = 5.8e-39, Sum P(2) = 5.8e-39
Identities = 80/186 (43%), Positives = 110/186 (59%)
Query: 270 PFYSSA---IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADR-E 325
PFYS++ V+ ++G +R++F AR + PCI+F+DEIDA+G R G S E
Sbjct: 362 PFYSTSGSDFVEMFVGVGPSRVRDLFEQARKNAPCIVFIDEIDAVGRARGKGGFSGSNDE 421
Query: 326 IQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAH 385
+ TL +LL +MDGF L V ++ ATNRPD LD ALLRPGR DR+I I P+ ++R
Sbjct: 422 RENTLNQLLVEMDGFKPLKNVVVLAATNRPDILDKALLRPGRFDRQITIDNPDLKSREEI 481
Query: 386 TWPISIHAGPIAKHGEIDY-EAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFM 444
+H + I+Y E + KL+ F+GAD+ NVC EA L A R E +T E F
Sbjct: 482 ---FRVHLAALLLDKSINYAERLSKLTPGFSGADIANVCNEAALIAARRHAEIITLEHFD 538
Query: 445 KAVRKV 450
AV +V
Sbjct: 539 AAVDRV 544
Score = 147 (56.8 bits), Expect = 5.8e-39, Sum P(2) = 5.8e-39
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 159 NMSHEDPGDITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGK 218
N + + +S + GL E E+ E + L NP+ F +G P+G +L GPPGTGK
Sbjct: 290 NKFEKSTSTVKFSDVAGLGEAKVEIEEFVNF-LKNPKKFHDIGAKIPRGAILVGPPGTGK 348
Query: 219 TLLARAVASQLDANFLKVVSSLFV 242
TL+A+A A + + F S FV
Sbjct: 349 TLIAKATAGEANVPFYSTSGSDFV 372
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 409 (149.0 bits), Expect = 3.0e-35, P = 3.0e-35
Identities = 78/178 (43%), Positives = 119/178 (66%)
Query: 497 ESKLDYKPVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVV 556
++KL+ + V++ L NP+ + +G PKGCLL GPPGTGKTLLARAVA + F
Sbjct: 269 QAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCA 327
Query: 557 SSAIVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLME 616
+S V+ ++G A +R++F A++ PCI+F+DEIDA+G +R + + E ++T+ +
Sbjct: 328 ASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQ 387
Query: 617 LLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 674
LL +MDGF V ++ ATNRPD LD ALLRPGR DR++ + P+ R++IL++H+
Sbjct: 388 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHS 445
Score = 326 (119.8 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 65/184 (35%), Positives = 113/184 (61%)
Query: 270 PFYSSA---IVDKYIGESARLIREMFNYARNHQPCIIFMDEIDAIGGRRFSEGTSADREI 326
PF+S A V+ ++G A +R++F A++ PCI+F+DEIDA+G +R + + E
Sbjct: 322 PFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDER 381
Query: 327 QRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLAHT 386
++T+ +LL +MDGF V ++ ATNRPD LD ALLRPGR DR++ + P+ R+
Sbjct: 382 EQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKI- 440
Query: 387 WPISIHAGPIAKHGEIDYEAVVKLSDSFNGADLRNVCTEAGLFAIRSEREYVTQEDFMKA 446
+ +H+ A ++D++ V + + F GADL+N+ EA + A R E + +++++ A
Sbjct: 441 --LQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDA 498
Query: 447 VRKV 450
+ ++
Sbjct: 499 LERI 502
Score = 168 (64.2 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 34/75 (45%), Positives = 48/75 (64%)
Query: 168 ITYSAIGGLSEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVAS 227
++++ + G + EL+EV++ L NP+ + +G PKGCLL GPPGTGKTLLARAVA
Sbjct: 259 VSFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 317
Query: 228 QLDANFLKVVSSLFV 242
+ F +S FV
Sbjct: 318 EAGVPFFSCAASEFV 332
WARNING: HSPs involving 531 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 741 741 0.00088 121 3 11 22 0.39 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 781
No. of states in DFA: 609 (65 KB)
Total size of DFA: 321 KB (2162 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 71.52u 0.10s 71.62t Elapsed: 00:00:35
Total cpu time: 71.66u 0.11s 71.77t Elapsed: 00:00:35
Start: Thu Aug 15 14:23:24 2013 End: Thu Aug 15 14:23:59 2013
WARNINGS ISSUED: 2