Query psy11261
Match_columns 247
No_of_seqs 133 out of 159
Neff 5.7
Searched_HMMs 13730
Date Fri Aug 16 22:23:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11261.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/11261hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1b3ua_ a.118.1.2 (A:) Constan 75.8 1.8 0.00013 37.5 5.8 67 64-135 130-196 (588)
2 d1xqra1 a.118.1.21 (A:87-350) 75.2 2.7 0.0002 33.2 6.3 89 42-132 123-215 (264)
3 d1b3ua_ a.118.1.2 (A:) Constan 70.2 2.6 0.00019 36.5 5.3 73 63-135 284-356 (588)
4 d2bpta1 a.118.1.1 (A:1-861) Im 67.1 9.7 0.00071 33.3 8.6 133 41-195 576-713 (861)
5 d2vglb_ a.118.1.10 (B:) Adapti 64.6 12 0.00087 33.2 8.9 71 63-134 236-310 (579)
6 d1ibrb_ a.118.1.1 (B:) Importi 60.1 14 0.00099 29.6 7.7 109 76-210 343-454 (458)
7 d1u6gc_ a.118.1.2 (C:) Cullin- 60.0 13 0.00094 34.7 8.5 142 63-229 130-278 (1207)
8 d1u6gc_ a.118.1.2 (C:) Cullin- 52.3 5.8 0.00043 37.2 4.5 93 41-135 192-284 (1207)
9 d1qbkb_ a.118.1.1 (B:) Karyoph 51.9 2.9 0.00021 38.6 2.2 114 14-135 392-510 (888)
10 d1ibrb_ a.118.1.1 (B:) Importi 46.4 21 0.0015 28.3 6.7 93 40-136 346-440 (458)
11 d1xm9a1 a.118.1.24 (A:244-700) 45.3 17 0.0012 28.4 5.8 66 66-132 8-73 (457)
12 d2vglb_ a.118.1.10 (B:) Adapti 44.3 17 0.0012 32.2 6.1 107 6-131 3-111 (579)
13 d2bpta1 a.118.1.1 (A:1-861) Im 40.9 91 0.0066 26.6 10.5 118 16-136 592-715 (861)
14 d1q1sc_ a.118.1.1 (C:) Importi 38.8 18 0.0013 29.1 5.1 90 43-134 294-388 (434)
15 d1q1sc_ a.118.1.1 (C:) Importi 33.0 33 0.0024 27.4 5.8 89 42-131 34-127 (434)
16 d2vgla_ a.118.1.10 (A:) Adapti 27.1 42 0.0031 29.3 5.8 89 39-133 300-391 (584)
17 d1te4a_ a.118.1.16 (A:) MTH187 26.1 62 0.0045 21.2 5.4 76 37-129 35-110 (111)
18 d1xqra1 a.118.1.21 (A:87-350) 25.9 39 0.0028 25.9 4.8 88 44-132 37-131 (264)
19 d1qgra_ a.118.1.1 (A:) Importi 25.1 1.2E+02 0.0088 26.0 8.5 71 63-134 369-439 (876)
20 d1wa5b_ a.118.1.1 (B:) Karyoph 23.5 65 0.0047 26.5 6.2 67 67-133 379-447 (503)
21 d1szaa_ a.118.9.4 (A:) PCF11 p 22.5 83 0.006 22.6 5.9 101 3-107 29-137 (144)
22 d1oyza_ a.118.1.16 (A:) Hypoth 21.9 45 0.0033 24.6 4.3 24 65-88 24-47 (276)
No 1
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.76 E-value=1.8 Score=37.53 Aligned_cols=67 Identities=15% Similarity=0.114 Sum_probs=38.7
Q ss_pred HHHHHHhcCCcchhhHhHHHHHHhhcccCCchHHHHhHHHHHHHhhhhccCcchhHHhhchhhhhhhHhhcc
Q psy11261 64 LIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSDVELRMAGISGIQGIIRKTV 135 (247)
Q Consensus 64 ii~~lL~s~~~~l~i~~~~tf~~F~~~~~d~~~y~~~y~~~v~~f~~la~~~~~~~R~aGLqaL~~~V~~~~ 135 (247)
++..|.++.....+..++..+-.+..... . .. ...+++.+.+++.......|.+..+++..++....
T Consensus 130 ~i~~L~~~~~~~~r~~a~~ll~~~~~~~~-~-~~---~~~l~~~~~~l~~D~~~~VR~~a~~~l~~~~~~~~ 196 (588)
T d1b3ua_ 130 LVKRLAGGDWFTSRTSACGLFSVCYPRVS-S-AV---KAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLE 196 (588)
T ss_dssp HHHHHHTCSSHHHHHHHGGGHHHHTTTSC-H-HH---HHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHhcccchHHHHHHHHHHHHHHHHhh-H-HH---HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc
Confidence 44445555545555555555444433211 1 22 23456667777777666888888888888777553
No 2
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.21 E-value=2.7 Score=33.20 Aligned_cols=89 Identities=6% Similarity=0.063 Sum_probs=61.9
Q ss_pred HHHHHHHHHhccccchhhhHH----HHHHHHHhcCCcchhhHhHHHHHHhhcccCCchHHHHhHHHHHHHhhhhccCcch
Q psy11261 42 LEAMNQILLSCHAHALNLLQK----KLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSDV 117 (247)
Q Consensus 42 l~i~~kLl~~C~~q~l~LFa~----~ii~~lL~s~~~~l~i~~~~tf~~F~~~~~d~~~y~~~y~~~v~~f~~la~~~~~ 117 (247)
+.++..|+..++. +...|.. ..+-.+|.+.+++++..++..+..++...++..... .-.+.++....+.+..+.
T Consensus 123 ~~aL~~l~~~~~~-~~~~~~~~~gi~~L~~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~~-~~~~~v~~L~~lL~~~~~ 200 (264)
T d1xqra1 123 LFAISCLVREQEA-GLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTL-CSMGMVQQLVALVRTEHS 200 (264)
T ss_dssp HHHHHHHHTTCHH-HHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHH-HHTTHHHHHHHHHTSCCS
T ss_pred HHHHHHHhccchh-hHHHHHHhhhhhHHHHHHhcCchHHHHHHHHHHHHHHhccHHHHHHH-HHhhhHHHHHHHHcCCCH
Confidence 3444455444444 2456666 555567788999999999999988887655442222 234578888888887777
Q ss_pred hHHhhchhhhhhhHh
Q psy11261 118 ELRMAGISGIQGIIR 132 (247)
Q Consensus 118 ~~R~aGLqaL~~~V~ 132 (247)
.+|...+.||..++.
T Consensus 201 ~~~~~a~~aL~~L~~ 215 (264)
T d1xqra1 201 PFHEHVLGALCSLVT 215 (264)
T ss_dssp THHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHh
Confidence 889999999988875
No 3
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=70.16 E-value=2.6 Score=36.53 Aligned_cols=73 Identities=12% Similarity=0.079 Sum_probs=48.8
Q ss_pred HHHHHHHhcCCcchhhHhHHHHHHhhcccCCchHHHHhHHHHHHHhhhhccCcchhHHhhchhhhhhhHhhcc
Q psy11261 63 KLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSDVELRMAGISGIQGIIRKTV 135 (247)
Q Consensus 63 ~ii~~lL~s~~~~l~i~~~~tf~~F~~~~~d~~~y~~~y~~~v~~f~~la~~~~~~~R~aGLqaL~~~V~~~~ 135 (247)
.++..++...+++++..++..+..++..-..+.......+.+++.+..+........|.+...++..+....+
T Consensus 284 ~~l~~ll~d~~~~vr~~a~~~l~~~~~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~vr~~~~~~l~~~~~~~~ 356 (588)
T d1b3ua_ 284 PAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILG 356 (588)
T ss_dssp HHHHHHHTCSSHHHHHHHHHHHHHHHHTSCTTTHHHHHHHTHHHHHHHHHTCSCHHHHHHHHTTGGGGHHHHC
T ss_pred HHHHHHHhccchHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHhhcCCChHHHHHHHHHHhhhhhccc
Confidence 4445566777888888888888887765433323333446677777777777666788777777776655443
No 4
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=67.06 E-value=9.7 Score=33.28 Aligned_cols=133 Identities=8% Similarity=0.094 Sum_probs=82.0
Q ss_pred HHHHHHHHHHhccccchhhhHHHHHHHHH---h-cCCcchhhHhHHHHHHhhcccCCchHHHHhHHHHHHHhhhhccCcc
Q psy11261 41 SLEAMNQILLSCHAHALNLLQKKLIQKLL---E-CHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSD 116 (247)
Q Consensus 41 ~l~i~~kLl~~C~~q~l~LFa~~ii~~lL---~-s~~~~l~i~~~~tf~~F~~~~~d~~~y~~~y~~~v~~f~~la~~~~ 116 (247)
....+..++..|+++ ..-++..++..++ + ..+...+..+..++..++..-.. .+..-++.+++.+........
T Consensus 576 ~~~~l~~~~~~~~~~-~~~~~~~l~~~l~~~l~~~~~~~v~~~~l~~l~~l~~~~~~--~~~~~l~~i~p~l~~~l~~~~ 652 (861)
T d2bpta1 576 ILTVLAAVIRKSPSS-VEPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGK--GFEKYLETFSPYLLKALNQVD 652 (861)
T ss_dssp HHHHHHHHHHHCGGG-TGGGHHHHHHHHHHHHHSTTGGGTHHHHHHHHHHHHHHHGG--GGHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHhcchhh-HHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHhhH--HHHHHHHHHhhHHHHHhCCCC
Confidence 344567778888886 6666675555544 3 34455666677777666654322 345555677777776666555
Q ss_pred hhHHhhchhhhhhhHhhccccccchhhcccccccchhhccCCCCCCccccccccccccCCC-CChHHHHHHHHHHHHccc
Q psy11261 117 VELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWISDGGDLPTRTIPSLLYNMHHEMT-SDGSQMAETCLRELIGRA 195 (247)
Q Consensus 117 ~~~R~aGLqaL~~~V~~~~~d~l~~~i~~~~~~~~~~v~~~~~~~~~ivPslL~n~~~~~~-~~p~~~a~~CL~~l~~~a 195 (247)
...|.+.+.++..++...++ .+. +..+. +++.++..+..... .+.+.-+-.||-+++...
T Consensus 653 ~~v~~~a~~~l~~i~~~~~~-~~~------~~~~~------------i~~~L~~~l~~~~~~~~~k~~~~~~l~~i~~~~ 713 (861)
T d2bpta1 653 SPVSITAVGFIADISNSLEE-DFR------RYSDA------------MMNVLAQMISNPNARRELKPAVLSVFGDIASNI 713 (861)
T ss_dssp SHHHHHHHHHHHHHHHHTGG-GGH------HHHHH------------HHHHHHHHHHCTTCCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHH-HhH------hhHHH------------HHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 57888888888887765433 221 12233 77777766654322 234566778888887644
No 5
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.59 E-value=12 Score=33.16 Aligned_cols=71 Identities=11% Similarity=0.267 Sum_probs=42.8
Q ss_pred HHHHHH---HhcCCcchhhHhHHHHHHhhcccCCchHHHHh-HHHHHHHhhhhccCcchhHHhhchhhhhhhHhhc
Q psy11261 63 KLIQKL---LECHEHVLQILATQSFVKYANIEEDTPSYHRR-YDFFISKFSSMCHDSDVELRMAGISGIQGIIRKT 134 (247)
Q Consensus 63 ~ii~~l---L~s~~~~l~i~~~~tf~~F~~~~~d~~~y~~~-y~~~v~~f~~la~~~~~~~R~aGLqaL~~~V~~~ 134 (247)
.+++.+ |++.++..+..++.++..|.......+.+... .+.+.+.+..+... ...+|.++|+++..++.+.
T Consensus 236 ~li~~l~~~L~~~n~~V~~~a~~~i~~~~~~~~~~~~~~~~~~~~l~~~l~~L~s~-~~ei~y~aL~~i~~l~~~~ 310 (579)
T d2vglb_ 236 SICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSG-EPEVQYVALRNINLIVQKR 310 (579)
T ss_dssp HHHHHHTTCSCSSTTHHHHHHHHHHHHSCCSCCBTTBSHHHHHHHTHHHHHHHTTS-CHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCchHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHhhHHHHHHhcC-CchHHHHHHHHHHHHHHhC
Confidence 455554 45667777777788887776653322222222 23344444445543 3479999999999988754
No 6
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.12 E-value=14 Score=29.58 Aligned_cols=109 Identities=14% Similarity=0.099 Sum_probs=60.8
Q ss_pred hhhHhHHHHHHhhcccCCchHHHHhHHHHHHHhhhhccCcchhHHhhchhhhhhhHhhccccccchhhcccccccchhhc
Q psy11261 76 LQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSDVELRMAGISGIQGIIRKTVSDDLADNIWKSHHLDKRWIS 155 (247)
Q Consensus 76 l~i~~~~tf~~F~~~~~d~~~y~~~y~~~v~~f~~la~~~~~~~R~aGLqaL~~~V~~~~~d~l~~~i~~~~~~~~~~v~ 155 (247)
.+..+...+..++..-.+. ... .+++...+..+....+.|.|++.+|.+++.......+ ...++.
T Consensus 343 ~~~~a~~~l~~l~~~~~~~--~~~---~l~~~i~~~l~s~~~~~r~aal~~l~~i~~~~~~~~~------~~~l~~---- 407 (458)
T d1ibrb_ 343 PCKAAGVCLMLLATCCEDD--IVP---HVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQL------KPLVIQ---- 407 (458)
T ss_dssp HHHHHHHHHHHHHHHTTTT--HHH---HHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCTTTT------CTTTTT----
T ss_pred HHHHHHHHHHHHHHhccHh--hhh---HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhcCHhHH------HHHHHH----
Confidence 5566667666666554332 333 3333333444444458999999999988753322211 123333
Q ss_pred cCCCCCCccccccccccccCCCCCh--HHHHHHHHHHHHcccc-ccccchhhhhhhhh
Q psy11261 156 DGGDLPTRTIPSLLYNMHHEMTSDG--SQMAETCLRELIGRAA-FGHVKGVVGPVLNH 210 (247)
Q Consensus 156 ~~~~~~~~ivPslL~n~~~~~~~~p--~~~a~~CL~~l~~~a~-~ttir~vl~p~~~~ 210 (247)
++|.++.-+++ ++| ...|-.||.+++.... ...-...+.|++.-
T Consensus 408 --------i~~~l~~~l~d---~~~~VR~~a~~~l~~i~~~~~~~~~~~~~l~~ll~~ 454 (458)
T d1ibrb_ 408 --------AMPTLIELMKD---PSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQC 454 (458)
T ss_dssp --------HHHHHHHGGGC---SCHHHHHHHHHHHHHHHHHGGGGCCSTTTHHHHHHH
T ss_pred --------HHHHHHHHhCC---CCHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHH
Confidence 78877776653 455 5677777777776442 22223345555543
No 7
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.01 E-value=13 Score=34.69 Aligned_cols=142 Identities=10% Similarity=0.107 Sum_probs=78.0
Q ss_pred HHHHHHHh----cCCcchhhHhHHHHHHhhcccCCchHHHHhHHHHHHHhhhhccCcchhHHhhchhhhhhhHhhccccc
Q psy11261 63 KLIQKLLE----CHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSDVELRMAGISGIQGIIRKTVSDD 138 (247)
Q Consensus 63 ~ii~~lL~----s~~~~l~i~~~~tf~~F~~~~~d~~~y~~~y~~~v~~f~~la~~~~~~~R~aGLqaL~~~V~~~~~d~ 138 (247)
.++..+.. ..++..+..++..+....+.-+.. ....++.+++.+..........+|..++++|+.++.....+.
T Consensus 130 ~l~~~l~~~~~~~~~~~v~~~al~~l~~l~~~~g~~--l~~~~~~il~~l~~~l~~~~~~vR~~A~~~l~~l~~~~~~~~ 207 (1207)
T d1u6gc_ 130 KITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGL--LVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIV 207 (1207)
T ss_dssp HHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHTCSS--CTTTHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC----
T ss_pred HHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHhhHh--hHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHCCHHH
Confidence 44555443 234455666666666554443321 223345667766666666566899999999999988664432
Q ss_pred cchhhcccccccchhhccCCCCCCccccccccccccCCCCChHHHHHHHHHHHHcccc---ccccchhhhhhhhhccCCC
Q psy11261 139 LADNIWKSHHLDKRWISDGGDLPTRTIPSLLYNMHHEMTSDGSQMAETCLRELIGRAA---FGHVKGVVGPVLNHLDMHR 215 (247)
Q Consensus 139 l~~~i~~~~~~~~~~v~~~~~~~~~ivPslL~n~~~~~~~~p~~~a~~CL~~l~~~a~---~ttir~vl~p~~~~~D~~~ 215 (247)
+. . +++.++..+......+-..-+-.|+-.|++.+. ...+..++..++.+++..+
T Consensus 208 ~~----------~------------~~~~ll~~l~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~l~~i~~~l~~~l~~~~ 265 (1207)
T d1u6gc_ 208 FV----------D------------LIEHLLSELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVDD 265 (1207)
T ss_dssp CT----------T------------HHHHHHHHHHHTCSSCSCTTHHHHHHHHHHHSSGGGTTSCTTHHHHHHHHHSSCC
T ss_pred HH----------H------------HHHHHHHHHccCCCHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHHhcCcc
Confidence 21 1 445444444332222223335567777776552 3446778888888887654
Q ss_pred CCCChhhHHHHHHH
Q psy11261 216 LWPPKDFAYQVFRI 229 (247)
Q Consensus 216 ~W~~~~~A~~~~~~ 229 (247)
--. ...|..++..
T Consensus 266 ~~~-r~~al~~l~~ 278 (1207)
T d1u6gc_ 266 DEL-REYCIQAFES 278 (1207)
T ss_dssp TTT-HHHHHHHHHH
T ss_pred HHH-HHHHHHHHHH
Confidence 211 1455555554
No 8
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.29 E-value=5.8 Score=37.21 Aligned_cols=93 Identities=16% Similarity=0.225 Sum_probs=55.7
Q ss_pred HHHHHHHHHHhccccchhhhHHHHHHHHHhcCCcchhhHhHHHHHHhhcccCCchHHHHhHHHHHHHhhhhccCcchhHH
Q psy11261 41 SLEAMNQILLSCHAHALNLLQKKLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSDVELR 120 (247)
Q Consensus 41 ~l~i~~kLl~~C~~q~l~LFa~~ii~~lL~s~~~~l~i~~~~tf~~F~~~~~d~~~y~~~y~~~v~~f~~la~~~~~~~R 120 (247)
++..+..|+..|..+-++-+...+++.+..+.+...+..++.++...+..... .+......+++.........++.+|
T Consensus 192 A~~~l~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~~~~~l~~l~~~~~~--~~~~~l~~i~~~l~~~l~~~~~~~r 269 (1207)
T d1u6gc_ 192 TIIALGHLVMSCGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQAGH--RIGEYLEKIIPLVVKFCNVDDDELR 269 (1207)
T ss_dssp HHHHHHHHTTTC----CTTHHHHHHHHHHHTCSSCSCTTHHHHHHHHHHHSSG--GGTTSCTTHHHHHHHHHSSCCTTTH
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHcch--hhHHHHHHHHHHHHHHhcCccHHHH
Confidence 45556666666665434445556777666666666666677777666554321 1222334455555555566666899
Q ss_pred hhchhhhhhhHhhcc
Q psy11261 121 MAGISGIQGIIRKTV 135 (247)
Q Consensus 121 ~aGLqaL~~~V~~~~ 135 (247)
.++++++..++....
T Consensus 270 ~~al~~l~~l~~~~~ 284 (1207)
T d1u6gc_ 270 EYCIQAFESFVRRCP 284 (1207)
T ss_dssp HHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHhCh
Confidence 999999999987653
No 9
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.94 E-value=2.9 Score=38.64 Aligned_cols=114 Identities=15% Similarity=0.176 Sum_probs=74.3
Q ss_pred chhhhHHHHHHHHHHHHhhcCCCceeeHHHHHHHHHHhccccchhhhHHHHHHHH---HhcCCcchhhHhHHHHHHhhcc
Q psy11261 14 KLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLLQKKLIQKL---LECHEHVLQILATQSFVKYANI 90 (247)
Q Consensus 14 KL~KIg~yLekR~~kdl~r~r~g~V~V~l~i~~kLl~~C~~q~l~LFa~~ii~~l---L~s~~~~l~i~~~~tf~~F~~~ 90 (247)
-+|.+-.++++.+..+=|+.|.+ ++-++..+.+.|.+. +.-+...++..| |+..++..+..+|.++-+|+..
T Consensus 392 il~~~l~~l~~~l~s~~~~~rea----a~~alg~i~eg~~~~-~~~~l~~li~~l~~~l~d~~~~Vr~~a~~~l~~~~~~ 466 (888)
T d1qbkb_ 392 LLPHILPLLKELLFHHEWVVKES----GILVLGAIAEGCMQG-MIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHW 466 (888)
T ss_dssp SHHHHHHHHHHTTTSSSHHHHHH----HHHHHHHHTTTSHHH-HTTTHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHhhccchhHHHHH----HHHHhhhhhhhHHHH-hcccchhhhHHHHHhccCCCHHHHHHHHHHHHHHHHH
Confidence 46777788877776655555543 455778888899886 666666454444 4567788888888888887753
Q ss_pred --cCCchHHHHhHHHHHHHhhhhccCcchhHHhhchhhhhhhHhhcc
Q psy11261 91 --EEDTPSYHRRYDFFISKFSSMCHDSDVELRMAGISGIQGIIRKTV 135 (247)
Q Consensus 91 --~~d~~~y~~~y~~~v~~f~~la~~~~~~~R~aGLqaL~~~V~~~~ 135 (247)
+.+...|. ..+++...........++|.++..||..++...+
T Consensus 467 ~~~~~~~~~~---~~~l~~ll~~l~d~~~~V~~~a~~al~~l~~~~~ 510 (888)
T d1qbkb_ 467 VVSQPPDTYL---KPLMTELLKRILDSNKRVQEAACSAFATLEEEAC 510 (888)
T ss_dssp HHSSCHHHHT---TTHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHT
T ss_pred hhhhhhhhhh---hhhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhh
Confidence 22222333 3344444444445555889999999988886553
No 10
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.39 E-value=21 Score=28.34 Aligned_cols=93 Identities=10% Similarity=0.046 Sum_probs=55.8
Q ss_pred eHHHHHHHHHHhccccchhhhHHHHHHHHHhcCCcchhhHhHHHHHHhhcccCCc--hHHHHhHHHHHHHhhhhccCcch
Q psy11261 40 MSLEAMNQILLSCHAHALNLLQKKLIQKLLECHEHVLQILATQSFVKYANIEEDT--PSYHRRYDFFISKFSSMCHDSDV 117 (247)
Q Consensus 40 V~l~i~~kLl~~C~~q~l~LFa~~ii~~lL~s~~~~l~i~~~~tf~~F~~~~~d~--~~y~~~y~~~v~~f~~la~~~~~ 117 (247)
....++..+...+.++-++.+. .++...|++.+...+.-|+.+|-.++..-.+. ..|.. .+++....+.+....
T Consensus 346 ~a~~~l~~l~~~~~~~~~~~l~-~~i~~~l~s~~~~~r~aal~~l~~i~~~~~~~~~~~~l~---~i~~~l~~~l~d~~~ 421 (458)
T d1ibrb_ 346 AAGVCLMLLATCCEDDIVPHVL-PFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVI---QAMPTLIELMKDPSV 421 (458)
T ss_dssp HHHHHHHHHHHHTTTTHHHHHH-HHHHHHTTCSSHHHHHHHHHHHHHTSSSSCTTTTCTTTT---THHHHHHHGGGCSCH
T ss_pred HHHHHHHHHHHhccHhhhhHHH-HHHHHHhcCCCHHHHHHHHHHHHHHHHhcCHhHHHHHHH---HHHHHHHHHhCCCCH
Confidence 4566666676666665222211 56666677777777766666666655432111 12333 345555555555566
Q ss_pred hHHhhchhhhhhhHhhccc
Q psy11261 118 ELRMAGISGIQGIIRKTVS 136 (247)
Q Consensus 118 ~~R~aGLqaL~~~V~~~~~ 136 (247)
++|.+.+.+|..++....+
T Consensus 422 ~VR~~a~~~l~~i~~~~~~ 440 (458)
T d1ibrb_ 422 VVRDTAAWTVGRICELLPE 440 (458)
T ss_dssp HHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 9999999999988765533
No 11
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.26 E-value=17 Score=28.42 Aligned_cols=66 Identities=9% Similarity=0.090 Sum_probs=47.9
Q ss_pred HHHHhcCCcchhhHhHHHHHHhhcccCCchHHHHhHHHHHHHhhhhccCcchhHHhhchhhhhhhHh
Q psy11261 66 QKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSDVELRMAGISGIQGIIR 132 (247)
Q Consensus 66 ~~lL~s~~~~l~i~~~~tf~~F~~~~~d~~~y~~~y~~~v~~f~~la~~~~~~~R~aGLqaL~~~V~ 132 (247)
-.+|.+.+++++..|+.++-..|.-.++....+.. .+-|+.+.++-..+...+|..++.+|..++.
T Consensus 8 v~~L~~~~~~~~~~a~~~l~~l~~~~~~~~~~i~~-~g~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~ 73 (457)
T d1xm9a1 8 VQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQ-LGGICKLVDLLRSPNQNVQQAAAGALRNLVF 73 (457)
T ss_dssp HHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHH-TTHHHHHHHHTTSSCHHHHHHHHHHHHHHHS
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHH-CCcHHHHHHHHCCCCHHHHHHHHHHHHHHHc
Confidence 34678999999999999999888544443333332 2346677777766667899999999988874
No 12
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.28 E-value=17 Score=32.16 Aligned_cols=107 Identities=13% Similarity=0.217 Sum_probs=60.8
Q ss_pred hhhccCCCchhhhHHHHHHHHHHHHhhcCCCceeeHHHHHHHHHHh--ccccchhhhHHHHHHHHHhcCCcchhhHhHHH
Q psy11261 6 FYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLS--CHAHALNLLQKKLIQKLLECHEHVLQILATQS 83 (247)
Q Consensus 6 yYa~s~p~KL~KIg~yLekR~~kdl~r~r~g~V~V~l~i~~kLl~~--C~~q~l~LFa~~ii~~lL~s~~~~l~i~~~~t 83 (247)
||..+++..+.+|-+-|..+ +..--.+++.|++-. .=.+ +.-+-..|++ ++++++.+++-++.-.
T Consensus 3 ~f~~~~~~e~~eir~~L~s~-----------~~~~r~~al~kli~~~~~G~d-~s~l~~~vi~-~~~s~d~~~Kkl~yl~ 69 (579)
T d2vglb_ 3 YFTTNKKGEIFELKAELNNE-----------KKEKRKEAVKKVIAAMTVGKD-VSSLFPDVVN-CMQTDNLELKKLVYLY 69 (579)
T ss_dssp TTCCCSSSHHHHHHHHTTSS-----------CHHHHHHHHHHHHHHHHTTCC-CGGGHHHHHH-TTSSSCHHHHHHHHHH
T ss_pred CCcCCCchHHHHHHHHhcCC-----------CHHHHHHHHHHHHHHHHCCCC-chhHHHHHHH-HhCCCCHHHHHHHHHH
Confidence 67777788777776666432 222233566666643 2233 4443346665 5677888888888777
Q ss_pred HHHhhcccCCchHHHHhHHHHHHHhhhhccCcchhHHhhchhhhhhhH
Q psy11261 84 FVKYANIEEDTPSYHRRYDFFISKFSSMCHDSDVELRMAGISGIQGII 131 (247)
Q Consensus 84 f~~F~~~~~d~~~y~~~y~~~v~~f~~la~~~~~~~R~aGLqaL~~~V 131 (247)
+..|+..+.|- . --.|+.|.+-....+..+|+.+|++|+.+.
T Consensus 70 l~~~~~~~~d~---~---~l~intl~kDl~d~n~~iR~lALr~L~~i~ 111 (579)
T d2vglb_ 70 LMNYAKSQPDM---A---IMAVNSFVKDCEDPNPLIRALAVRTMGCIR 111 (579)
T ss_dssp HHHHHHHSHHH---H---HTTHHHHGGGSSSSSHHHHHHHHHHHHTCC
T ss_pred HHHhCcCCccH---H---HHHHHHHHHHcCCCCHHHHHHHHHHHHcCC
Confidence 77666544321 0 011233333333344578888888877653
No 13
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=40.92 E-value=91 Score=26.60 Aligned_cols=118 Identities=16% Similarity=0.171 Sum_probs=68.7
Q ss_pred hhhHHHHHHHHHHHHhhcCCCcee-eHHHHHHHHHHhccccchhhhHHHHHHH---HHhcCCcchhhHhHHHHHHhhccc
Q psy11261 16 DRIGDYLYETASRDISRKRTQYVL-MSLEAMNQILLSCHAHALNLLQKKLIQK---LLECHEHVLQILATQSFVKYANIE 91 (247)
Q Consensus 16 ~KIg~yLekR~~kdl~r~r~g~V~-V~l~i~~kLl~~C~~q~l~LFa~~ii~~---lL~s~~~~l~i~~~~tf~~F~~~~ 91 (247)
..+..-+-.-+.+-+.......++ -++.++..++..++++ ..-|.+.++.. .|+..+++.+..++..+.+.+..-
T Consensus 592 ~~~~~~l~~~l~~~l~~~~~~~v~~~~l~~l~~l~~~~~~~-~~~~l~~i~p~l~~~l~~~~~~v~~~a~~~l~~i~~~~ 670 (861)
T d2bpta1 592 EPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKG-FEKYLETFSPYLLKALNQVDSPVSITAVGFIADISNSL 670 (861)
T ss_dssp GGGHHHHHHHHHHHHHSTTGGGTHHHHHHHHHHHHHHHGGG-GHHHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHhhHH-HHHHHHHHhhHHHHHhCCCCHHHHHHHHHHHHHHHHHh
Confidence 333333444444444444444443 4677888888888886 66666644444 456677778888887776665542
Q ss_pred CCchHHHHhHHHHHHHhhhhccCc--chhHHhhchhhhhhhHhhccc
Q psy11261 92 EDTPSYHRRYDFFISKFSSMCHDS--DVELRMAGISGIQGIIRKTVS 136 (247)
Q Consensus 92 ~d~~~y~~~y~~~v~~f~~la~~~--~~~~R~aGLqaL~~~V~~~~~ 136 (247)
++ .+....+.++......-... ...+|.+-+.+|..++...++
T Consensus 671 ~~--~~~~~~~~i~~~L~~~l~~~~~~~~~k~~~~~~l~~i~~~~~~ 715 (861)
T d2bpta1 671 EE--DFRRYSDAMMNVLAQMISNPNARRELKPAVLSVFGDIASNIGA 715 (861)
T ss_dssp GG--GGHHHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHHHHHHGG
T ss_pred HH--HhHhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 22 12222234444444433322 226788888899888887765
No 14
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=38.80 E-value=18 Score=29.06 Aligned_cols=90 Identities=12% Similarity=0.116 Sum_probs=56.6
Q ss_pred HHHHHHHHhccccchhhhHH----HHHHHHHhcCCcchhhHhHHHHHHhhcccCCc-hHHHHhHHHHHHHhhhhccCcch
Q psy11261 43 EAMNQILLSCHAHALNLLQK----KLIQKLLECHEHVLQILATQSFVKYANIEEDT-PSYHRRYDFFISKFSSMCHDSDV 117 (247)
Q Consensus 43 ~i~~kLl~~C~~q~l~LFa~----~ii~~lL~s~~~~l~i~~~~tf~~F~~~~~d~-~~y~~~y~~~v~~f~~la~~~~~ 117 (247)
.++..|.....+. ...+.. ..+-.++.+.+++.+..++..+..++...+.. ..+..+. ++++.+.++-...+.
T Consensus 294 ~~L~~l~~~~~~~-~~~i~~~~~i~~li~~l~~~~~~v~~~a~~~l~nl~~~~~~~~~~~l~~~-~~i~~L~~ll~~~d~ 371 (434)
T d1q1sc_ 294 WTMSNITAGRQDQ-IQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHC-GIIEPLMNLLSAKDT 371 (434)
T ss_dssp HHHHHHTTSCHHH-HHHHHHTTCHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHT-TCHHHHHHHTTSSCH
T ss_pred HHHhhhccccchh-HHHHhhhhhHHHHHHHHhccChHHHHHHHHHHHHHHhcCCHHHHHHHHHC-CcHHHHHHHhcCCCH
Confidence 3344444333333 344444 33334567788999999998888777654322 1233232 457778887777777
Q ss_pred hHHhhchhhhhhhHhhc
Q psy11261 118 ELRMAGISGIQGIIRKT 134 (247)
Q Consensus 118 ~~R~aGLqaL~~~V~~~ 134 (247)
.++.+++.+|..+....
T Consensus 372 ~~~~~~l~~l~~ll~~~ 388 (434)
T d1q1sc_ 372 KIIQVILDAISNIFQAA 388 (434)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 89999999999887644
No 15
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=32.97 E-value=33 Score=27.41 Aligned_cols=89 Identities=13% Similarity=0.123 Sum_probs=50.6
Q ss_pred HHHHHHHHHhccccchhhhHH-HHHHH---HHh-cCCcchhhHhHHHHHHhhcccCCchHHHHhHHHHHHHhhhhccCcc
Q psy11261 42 LEAMNQILLSCHAHALNLLQK-KLIQK---LLE-CHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSD 116 (247)
Q Consensus 42 l~i~~kLl~~C~~q~l~LFa~-~ii~~---lL~-s~~~~l~i~~~~tf~~F~~~~~d~~~y~~~y~~~v~~f~~la~~~~ 116 (247)
+..+++|+..-+...+..+.+ .+|.. +|. +.+++++..++.++..++...+....+.. -.+.|+.+..+...++
T Consensus 34 ~~~l~~l~s~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~v~~~a~~~L~~la~~~~~~~~~i~-~~~~i~~l~~~L~~~~ 112 (434)
T d1q1sc_ 34 TQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVV-DGGAIPAFISLLASPH 112 (434)
T ss_dssp HHHHHHHHHSSSCCCHHHHHHTTCHHHHHHHTTCGGGHHHHHHHHHHHHHHHTSCHHHHHHHH-HTTHHHHHHHHTTCSC
T ss_pred HHHHHHHhcCCCCchHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHhcCChhhhhHhh-hccchhhhhhccccCC
Confidence 444566665444421234455 44444 443 35567888888888877754332212222 2456777777777666
Q ss_pred hhHHhhchhhhhhhH
Q psy11261 117 VELRMAGISGIQGII 131 (247)
Q Consensus 117 ~~~R~aGLqaL~~~V 131 (247)
...|...+.+|..+.
T Consensus 113 ~~~~~~a~~~L~nl~ 127 (434)
T d1q1sc_ 113 AHISEQAVWALGNIA 127 (434)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 666666666665554
No 16
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.10 E-value=42 Score=29.29 Aligned_cols=89 Identities=19% Similarity=0.214 Sum_probs=51.3
Q ss_pred eeHHHHHHHHHHhccccchhhhHH--HHHHHHHhcCCcchhhHhHHHHHHhhcccCCchHHHHhHHHHHHHhhhhcc-Cc
Q psy11261 39 LMSLEAMNQILLSCHAHALNLLQK--KLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCH-DS 115 (247)
Q Consensus 39 ~V~l~i~~kLl~~C~~q~l~LFa~--~ii~~lL~s~~~~l~i~~~~tf~~F~~~~~d~~~y~~~y~~~v~~f~~la~-~~ 115 (247)
.|.+++.+.++...... .+... ..+..+|.+.+++.+..+...+...+.... .+.+...|...+ ...+. ++
T Consensus 300 aVl~e~i~~i~~~~~~~--~~~~~~i~~l~~lL~s~~~niry~aL~~L~~L~~~~~-~~~~~~~~~~~i---l~~l~~~~ 373 (584)
T d2vgla_ 300 AVLFEAISLIIHHDSEP--NLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEF-SHEAVKTHIETV---INALKTER 373 (584)
T ss_dssp HHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHSSCSCHHHHHHHHHHHHHHTTCTT-THHHHHTTHHHH---HHHHTTCC
T ss_pred HHHHHHHHHHHhcCCCH--HHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHccCC-CHHHHHHHHHHH---HHhcccCc
Confidence 35556666555544332 22222 556667888999999999888887776443 234444433222 22222 33
Q ss_pred chhHHhhchhhhhhhHhh
Q psy11261 116 DVELRMAGISGIQGIIRK 133 (247)
Q Consensus 116 ~~~~R~aGLqaL~~~V~~ 133 (247)
+..+|...|.-|..++..
T Consensus 374 ~~~Ir~~aL~lL~~L~n~ 391 (584)
T d2vgla_ 374 DVSVRQRAVDLLYAMCDR 391 (584)
T ss_dssp CHHHHHHHHHHHHHHCCH
T ss_pred hhHHHHHHHHHHHHhCCH
Confidence 336777777777777653
No 17
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=26.09 E-value=62 Score=21.16 Aligned_cols=76 Identities=12% Similarity=-0.020 Sum_probs=45.3
Q ss_pred ceeeHHHHHHHHHHhccccchhhhHHHHHHHHHhcCCcchhhHhHHHHHHhhcccCCchHHHHhHHHHHHHhhhhccCcc
Q psy11261 37 YVLMSLEAMNQILLSCHAHALNLLQKKLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSD 116 (247)
Q Consensus 37 ~V~V~l~i~~kLl~~C~~q~l~LFa~~ii~~lL~s~~~~l~i~~~~tf~~F~~~~~d~~~y~~~y~~~v~~f~~la~~~~ 116 (247)
+-.|-..+...|-..+..+ +...+..+|+..++..+..++.++-.+. + ...++....+....+
T Consensus 35 ~~~vR~~a~~~L~~~~~~~-----~~~~L~~~l~d~~~~VR~~a~~aL~~i~---~---------~~~~~~L~~ll~d~~ 97 (111)
T d1te4a_ 35 DWRIRGAAAWIIGNFQDER-----AVEPLIKLLEDDSGFVRSGAARSLEQIG---G---------ERVRAAMEKLAETGT 97 (111)
T ss_dssp CHHHHHHHHHHHGGGCSHH-----HHHHHHHHHHHCCTHHHHHHHHHHHHHC---S---------HHHHHHHHHHTTSCC
T ss_pred CHHHHHHHHHHHHhcchhh-----hHHHHHhhhccchhHHHHHHHHHHHHhC---c---------cchHHHHHHHHcCCC
Confidence 3344455555554333221 1134445677788888888888876642 1 233455555666666
Q ss_pred hhHHhhchhhhhh
Q psy11261 117 VELRMAGISGIQG 129 (247)
Q Consensus 117 ~~~R~aGLqaL~~ 129 (247)
..+|.+.+++|..
T Consensus 98 ~~vr~~A~~aL~t 110 (111)
T d1te4a_ 98 GFARKVAVNYLET 110 (111)
T ss_dssp THHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHc
Confidence 6889888888863
No 18
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.86 E-value=39 Score=25.89 Aligned_cols=88 Identities=15% Similarity=0.091 Sum_probs=53.0
Q ss_pred HHHHHHHhcccc-chhhhHH-----HHHHHHHhcCCcchhhHhHHHHHHhhcccCCchHHHHhHHHHHHHhhhhcc-Ccc
Q psy11261 44 AMNQILLSCHAH-ALNLLQK-----KLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCH-DSD 116 (247)
Q Consensus 44 i~~kLl~~C~~q-~l~LFa~-----~ii~~lL~s~~~~l~i~~~~tf~~F~~~~~d~~~y~~~y~~~v~~f~~la~-~~~ 116 (247)
++..|-.-|+.. +-.-|+. .++..+|++.+++++..|+..+-.++...+........ .+.|+.+..+-. ...
T Consensus 37 Al~~L~~L~~~~d~a~~l~~~gg~~~ll~~ll~s~~~~vr~~A~~~L~~l~~~~~~~~~~~~~-~~~i~~Lv~lL~~~~~ 115 (264)
T d1xqra1 37 ALELLADLCENMDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLG-LGALRKLLRLLDRDAC 115 (264)
T ss_dssp HHHHHHHHHTSHHHHHHHHHTTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHH-TTHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHcCHHHHHHHHHcCCHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHhhcCCC
Confidence 444444445331 2344555 44555677889999999999988887544322122211 245666666554 334
Q ss_pred hhHHhhchhhhhhhHh
Q psy11261 117 VELRMAGISGIQGIIR 132 (247)
Q Consensus 117 ~~~R~aGLqaL~~~V~ 132 (247)
...|..++.+|+.+++
T Consensus 116 ~~v~~~a~~aL~~l~~ 131 (264)
T d1xqra1 116 DTVRVKALFAISCLVR 131 (264)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhc
Confidence 4788888888888875
No 19
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.11 E-value=1.2e+02 Score=25.95 Aligned_cols=71 Identities=10% Similarity=0.029 Sum_probs=40.6
Q ss_pred HHHHHHHhcCCcchhhHhHHHHHHhhcccCCchHHHHhHHHHHHHhhhhccCcchhHHhhchhhhhhhHhhc
Q psy11261 63 KLIQKLLECHEHVLQILATQSFVKYANIEEDTPSYHRRYDFFISKFSSMCHDSDVELRMAGISGIQGIIRKT 134 (247)
Q Consensus 63 ~ii~~lL~s~~~~l~i~~~~tf~~F~~~~~d~~~y~~~y~~~v~~f~~la~~~~~~~R~aGLqaL~~~V~~~ 134 (247)
..+...+.+.+...+..++..+....... +..........+++.+..........+|.+++.++..++...
T Consensus 369 ~~i~~~l~~~~~~~r~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~ 439 (876)
T d1qgra_ 369 PFIKEHIKNPDWRYRDAAVMAFGCILEGP-EPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELL 439 (876)
T ss_dssp HHHHHHTTCSSHHHHHHHHHHHHHTSSSS-CHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhhccchHHHHHHHHHHHHhhhhhh-hHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHc
Confidence 33444455555444444444443332211 111233445567777777776666799999999998887654
No 20
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.50 E-value=65 Score=26.52 Aligned_cols=67 Identities=16% Similarity=0.140 Sum_probs=45.8
Q ss_pred HHHhcCCcchhhHhHHHHHHhhcccCCchHHHHhH--HHHHHHhhhhccCcchhHHhhchhhhhhhHhh
Q psy11261 67 KLLECHEHVLQILATQSFVKYANIEEDTPSYHRRY--DFFISKFSSMCHDSDVELRMAGISGIQGIIRK 133 (247)
Q Consensus 67 ~lL~s~~~~l~i~~~~tf~~F~~~~~d~~~y~~~y--~~~v~~f~~la~~~~~~~R~aGLqaL~~~V~~ 133 (247)
.+|.+.+++.+..++-++..++......+...... .++++.++++-...+..+..+.|.||..+...
T Consensus 379 ~~l~~~~~~v~~~a~~~l~nl~~~~~~~~~~~~~l~~~~~l~~l~~~L~~~d~~~~~~~L~~l~~ll~~ 447 (503)
T d1wa5b_ 379 KLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKM 447 (503)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHTTCHHHHHHHTTTCCHHHHHHHHHHHHHHHHH
T ss_pred HhcccCChhHHHHHHHHHHHHHhcccccHHHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 34567888888888888877776544333332211 34677788887776668888889999887653
No 21
>d1szaa_ a.118.9.4 (A:) PCF11 protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=22.47 E-value=83 Score=22.58 Aligned_cols=101 Identities=12% Similarity=0.086 Sum_probs=45.2
Q ss_pred chhhhhccCCCchhhhHHHHHHHHHHHHhhcCCCceeeHHHHHHHHHHhccccchhhhHH---HHHHHHHhcCCcchhhH
Q psy11261 3 KLTFYALSSPEKLDRIGDYLYETASRDISRKRTQYVLMSLEAMNQILLSCHAHALNLLQK---KLIQKLLECHEHVLQIL 79 (247)
Q Consensus 3 kL~yYa~s~p~KL~KIg~yLekR~~kdl~r~r~g~V~V~l~i~~kLl~~C~~q~l~LFa~---~ii~~lL~s~~~~l~i~ 79 (247)
.|+-+|..|+.--+.|.+-+++++.+.--.++.+ .|=+++.++..|+.+=.++|.+ .++.......+.+.+.-
T Consensus 29 ~Lt~~a~~~~~~a~~Iv~~i~~~i~~~~~~~KL~----~LYLiddI~~n~~~~y~~~f~~~l~~~f~~~y~~~~~~~r~k 104 (144)
T d1szaa_ 29 TLTKLAEENISCAQYFVDAIESRIEKCMPKQKLY----AFYALDSICKNVGSPYTIYFSRNLFNLYKRTYLLVDNTTRTK 104 (144)
T ss_dssp HHHHHHHHCGGGHHHHHHHHHHHHHHSCHHHHHH----HHHHHHHHHHHTCTTHHHHHHTTHHHHHHHHHTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCcccchh----hhhhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 3555555555555555555555544322222222 2334455555555543444444 44444444444444443
Q ss_pred hHHHHHHhhcccC-----CchHHHHhHHHHHHH
Q psy11261 80 ATQSFVKYANIEE-----DTPSYHRRYDFFISK 107 (247)
Q Consensus 80 ~~~tf~~F~~~~~-----d~~~y~~~y~~~v~~ 107 (247)
....+-.|-.-.. =.+++....+.++.+
T Consensus 105 l~rll~iW~~r~~~~~~vFp~~~l~~ie~~L~~ 137 (144)
T d1szaa_ 105 LINMFKLWLNPNDTGLPLFEGSALEKIEQFLIK 137 (144)
T ss_dssp HHHHHHHHSSGGGCSSCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCcCCCCHHHHHHHHHHHHH
Confidence 3333333433221 113455555555443
No 22
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=21.93 E-value=45 Score=24.63 Aligned_cols=24 Identities=17% Similarity=0.272 Sum_probs=16.0
Q ss_pred HHHHHhcCCcchhhHhHHHHHHhh
Q psy11261 65 IQKLLECHEHVLQILATQSFVKYA 88 (247)
Q Consensus 65 i~~lL~s~~~~l~i~~~~tf~~F~ 88 (247)
+..+|+..++..+..|+..+..+.
T Consensus 24 L~~~L~d~~~~vR~~A~~~L~~~~ 47 (276)
T d1oyza_ 24 LFRLLDDHNSLKRISSARVLQLRG 47 (276)
T ss_dssp HHHHTTCSSHHHHHHHHHHHHHHC
T ss_pred HHHHhcCCCHHHHHHHHHHHHhhC
Confidence 445667777777777777666554
Done!