Query psy11265
Match_columns 945
No_of_seqs 541 out of 2515
Neff 6.0
Searched_HMMs 46136
Date Fri Aug 16 22:27:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11265.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11265hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1393|consensus 100.0 1.3E-69 2.8E-74 583.5 16.2 206 2-230 5-235 (462)
2 COG3425 PksG 3-hydroxy-3-methy 100.0 2.6E-54 5.7E-59 476.2 10.6 260 492-795 1-312 (377)
3 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 1.7E-52 3.6E-57 480.9 10.5 285 493-795 1-375 (454)
4 KOG0545|consensus 100.0 7E-52 1.5E-56 426.8 5.0 155 777-938 16-264 (329)
5 PLN02577 hydroxymethylglutaryl 100.0 8.1E-51 1.7E-55 467.5 11.1 285 491-795 2-372 (459)
6 PF01154 HMG_CoA_synt_N: Hydro 100.0 7.4E-46 1.6E-50 372.2 3.5 154 5-179 1-160 (174)
7 COG3425 PksG 3-hydroxy-3-methy 100.0 4E-42 8.6E-47 379.8 12.6 225 7-258 1-243 (377)
8 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 5.1E-39 1.1E-43 365.7 7.2 291 494-817 1-344 (379)
9 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 8.7E-38 1.9E-42 359.4 10.6 228 8-258 1-257 (454)
10 PLN02577 hydroxymethylglutaryl 100.0 3.3E-36 7.2E-41 346.7 12.5 228 5-258 1-255 (459)
11 KOG1393|consensus 100.0 2.5E-34 5.5E-39 310.9 4.4 291 487-794 5-377 (462)
12 PF08540 HMG_CoA_synt_C: Hydro 100.0 4.7E-34 1E-38 309.9 3.4 161 631-795 9-203 (282)
13 KOG0545|consensus 100.0 1.4E-31 2.9E-36 277.0 6.5 197 268-474 13-215 (329)
14 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 1.8E-29 3.9E-34 287.6 11.2 216 9-258 1-239 (379)
15 PF01154 HMG_CoA_synt_N: Hydro 100.0 3.7E-30 8E-35 259.0 -0.4 120 490-623 1-168 (174)
16 KOG0544|consensus 99.9 6.7E-27 1.5E-31 208.5 10.2 94 287-416 15-108 (108)
17 KOG0543|consensus 99.9 4.3E-25 9.3E-30 244.6 14.9 163 259-471 79-242 (397)
18 COG0545 FkpA FKBP-type peptidy 99.9 1.2E-22 2.6E-27 207.4 11.2 95 283-415 110-204 (205)
19 KOG0549|consensus 99.9 5.4E-22 1.2E-26 198.5 11.0 94 288-417 84-177 (188)
20 PRK04262 hypothetical protein; 99.8 4.9E-19 1.1E-23 199.8 8.8 280 492-817 1-336 (347)
21 TIGR00748 HMG_CoA_syn_Arc hydr 99.8 9.5E-19 2.1E-23 197.5 8.2 279 493-817 1-335 (345)
22 TIGR03516 ppisom_GldI peptidyl 99.7 2E-17 4.4E-22 169.6 12.9 96 284-416 81-176 (177)
23 PRK11570 peptidyl-prolyl cis-t 99.7 3.4E-17 7.4E-22 171.7 13.2 107 264-415 99-205 (206)
24 KOG0552|consensus 99.7 1.9E-17 4.2E-22 173.2 10.8 97 282-415 128-225 (226)
25 PF00254 FKBP_C: FKBP-type pep 99.7 2E-16 4.3E-21 145.3 11.7 91 288-413 4-94 (94)
26 PRK15095 FKBP-type peptidyl-pr 99.6 4.7E-15 1E-19 149.4 11.8 124 288-417 4-145 (156)
27 PRK10902 FKBP-type peptidyl-pr 99.6 6.1E-15 1.3E-19 160.3 13.6 109 264-418 143-251 (269)
28 COG1047 SlpA FKBP-type peptidy 99.5 6E-14 1.3E-18 141.6 11.0 133 290-440 4-154 (174)
29 PRK05963 3-oxoacyl-(acyl carri 99.4 2.5E-13 5.4E-18 151.9 5.9 250 493-786 3-319 (326)
30 PRK04262 hypothetical protein; 99.4 2.4E-12 5.3E-17 145.6 12.7 225 7-258 1-243 (347)
31 PRK10737 FKBP-type peptidyl-pr 99.4 3E-12 6.6E-17 132.8 11.1 122 290-418 4-142 (196)
32 TIGR00748 HMG_CoA_syn_Arc hydr 99.3 4.8E-12 1E-16 143.2 13.0 224 8-258 1-242 (345)
33 TIGR00747 fabH 3-oxoacyl-(acyl 99.3 1.3E-12 2.8E-17 145.5 5.9 251 492-785 1-310 (318)
34 PRK09258 3-oxoacyl-(acyl carri 99.3 1.9E-12 4.1E-17 145.4 6.8 256 492-789 4-334 (338)
35 PRK12879 3-oxoacyl-(acyl carri 99.3 2.2E-12 4.8E-17 143.9 5.2 252 491-786 2-317 (325)
36 cd00830 KAS_III Ketoacyl-acyl 99.3 2.3E-12 5E-17 143.1 5.3 251 493-786 1-315 (320)
37 PRK07204 3-oxoacyl-(acyl carri 99.2 1.4E-11 3E-16 138.1 6.4 254 491-786 2-322 (329)
38 PRK09352 3-oxoacyl-(acyl carri 99.2 2.2E-11 4.7E-16 135.6 6.1 251 492-786 2-311 (319)
39 cd00827 init_cond_enzymes "ini 99.1 9.4E-11 2E-15 130.5 8.2 254 493-788 1-321 (324)
40 PRK06840 hypothetical protein; 99.1 1.7E-10 3.6E-15 130.0 7.0 58 491-548 2-59 (339)
41 KOG0543|consensus 99.0 1.7E-10 3.8E-15 129.2 5.9 58 286-346 6-63 (397)
42 CHL00203 fabH 3-oxoacyl-acyl-c 99.0 1.7E-10 3.7E-15 129.4 5.6 251 492-785 1-317 (326)
43 PRK12880 3-oxoacyl-(acyl carri 99.0 3.8E-10 8.3E-15 128.2 7.6 142 6-167 5-151 (353)
44 PRK05963 3-oxoacyl-(acyl carri 99.0 4.3E-10 9.4E-15 125.9 7.1 139 8-167 3-142 (326)
45 PLN02326 3-oxoacyl-[acyl-carri 99.0 4.1E-10 8.8E-15 129.1 6.2 254 491-785 45-371 (379)
46 cd00831 CHS_like Chalcone and 99.0 5.5E-10 1.2E-14 127.0 5.9 254 494-787 2-357 (361)
47 PRK09258 3-oxoacyl-(acyl carri 98.9 5.1E-09 1.1E-13 117.8 12.5 142 7-167 4-153 (338)
48 PRK12879 3-oxoacyl-(acyl carri 98.9 3.3E-09 7.1E-14 118.5 7.2 142 6-167 2-144 (325)
49 cd00830 KAS_III Ketoacyl-acyl 98.8 1.2E-08 2.6E-13 113.5 11.0 140 8-167 1-141 (320)
50 CHL00203 fabH 3-oxoacyl-acyl-c 98.8 6.5E-09 1.4E-13 116.7 6.9 140 7-167 1-141 (326)
51 PRK07204 3-oxoacyl-(acyl carri 98.8 8.6E-09 1.9E-13 115.6 7.8 141 7-167 3-145 (329)
52 PF08540 HMG_CoA_synt_C: Hydro 98.8 3.1E-09 6.6E-14 116.6 2.8 75 182-258 2-84 (282)
53 PRK06840 hypothetical protein; 98.7 1.4E-08 3E-13 114.5 7.4 143 5-165 1-144 (339)
54 PRK06816 3-oxoacyl-(acyl carri 98.7 4.7E-09 1E-13 120.4 3.5 84 681-786 286-369 (378)
55 COG0332 FabH 3-oxoacyl-[acyl-c 98.7 2.2E-08 4.9E-13 111.7 7.8 253 492-785 2-314 (323)
56 TIGR00747 fabH 3-oxoacyl-(acyl 98.7 2.2E-08 4.7E-13 111.7 7.8 141 7-167 1-142 (318)
57 PLN02326 3-oxoacyl-[acyl-carri 98.7 2.4E-08 5.3E-13 114.6 6.7 140 6-166 45-185 (379)
58 PRK12880 3-oxoacyl-(acyl carri 98.7 1.9E-08 4.2E-13 114.4 5.7 250 491-787 5-332 (353)
59 cd00827 init_cond_enzymes "ini 98.7 3.4E-08 7.4E-13 110.0 7.3 139 8-168 1-140 (324)
60 PRK09352 3-oxoacyl-(acyl carri 98.6 2.9E-07 6.3E-12 102.7 11.6 140 7-166 2-142 (319)
61 PLN03169 chalcone synthase fam 98.3 5.6E-07 1.2E-11 103.9 5.5 262 489-787 17-382 (391)
62 PLN03169 chalcone synthase fam 98.3 6.8E-07 1.5E-11 103.2 5.8 143 6-167 19-198 (391)
63 COG0332 FabH 3-oxoacyl-[acyl-c 98.3 1.2E-06 2.6E-11 98.1 7.4 140 7-167 2-143 (323)
64 PLN03171 chalcone synthase-lik 98.2 2E-06 4.3E-11 99.6 6.5 140 9-167 23-200 (399)
65 TIGR00115 tig trigger factor. 98.2 8.3E-06 1.8E-10 94.7 11.4 87 288-418 146-232 (408)
66 PRK06816 3-oxoacyl-(acyl carri 98.1 2.2E-06 4.8E-11 98.5 5.8 141 7-167 1-154 (378)
67 cd00831 CHS_like Chalcone and 98.1 1.9E-06 4E-11 98.3 5.0 139 9-167 2-177 (361)
68 PRK07515 3-oxoacyl-(acyl carri 98.1 3.1E-06 6.6E-11 97.0 5.7 80 681-786 285-364 (372)
69 PRK01490 tig trigger factor; P 98.0 3.2E-05 6.8E-10 90.6 11.4 86 288-417 157-242 (435)
70 PLN03171 chalcone synthase-lik 97.5 8.6E-05 1.9E-09 86.2 5.6 55 733-787 332-388 (399)
71 PRK07515 3-oxoacyl-(acyl carri 97.5 0.00016 3.5E-09 82.9 7.0 138 8-166 2-184 (372)
72 COG0544 Tig FKBP-type peptidyl 97.5 0.00039 8.5E-09 81.4 9.8 93 289-432 158-252 (441)
73 PLN03168 chalcone synthase; Pr 97.3 0.00023 4.9E-09 82.4 5.2 139 9-166 16-192 (389)
74 PLN03170 chalcone synthase; Pr 97.2 0.00036 7.8E-09 81.1 5.7 139 9-166 21-197 (401)
75 PLN03172 chalcone synthase fam 97.2 0.00032 6.9E-09 81.3 5.3 140 9-167 17-194 (393)
76 PF08541 ACP_syn_III_C: 3-Oxoa 97.1 0.00022 4.8E-09 65.0 2.2 75 684-785 8-82 (90)
77 PLN03173 chalcone synthase; Pr 97.1 0.0006 1.3E-08 79.0 6.0 139 9-166 17-193 (391)
78 PLN02377 3-ketoacyl-CoA syntha 97.0 0.00068 1.5E-08 80.5 5.6 49 735-786 422-470 (502)
79 PLN02932 3-ketoacyl-CoA syntha 96.9 0.0013 2.8E-08 77.8 6.2 50 733-785 396-445 (478)
80 PLN02932 3-ketoacyl-CoA syntha 96.7 0.0023 5E-08 75.6 5.9 142 4-166 63-239 (478)
81 PLN03168 chalcone synthase; Pr 96.3 0.0036 7.7E-08 72.6 4.4 55 733-788 321-380 (389)
82 PF00195 Chal_sti_synt_N: Chal 96.0 0.004 8.6E-08 66.8 2.5 143 5-166 11-191 (226)
83 TIGR00990 3a0801s09 mitochondr 95.8 0.0049 1.1E-07 75.3 2.8 64 399-467 94-157 (615)
84 PLN02377 3-ketoacyl-CoA syntha 95.8 0.0046 1E-07 73.6 2.3 95 52-166 167-263 (502)
85 cd00327 cond_enzymes Condensin 95.8 0.0053 1.1E-07 65.9 2.4 97 41-167 1-98 (254)
86 KOG0549|consensus 95.7 0.0076 1.7E-07 61.9 3.2 37 323-361 1-37 (188)
87 KOG4648|consensus 95.3 0.0083 1.8E-07 66.8 1.8 36 430-465 90-125 (536)
88 cd00327 cond_enzymes Condensin 95.2 0.0097 2.1E-07 63.8 2.0 83 682-786 160-249 (254)
89 PLN03170 chalcone synthase; Pr 95.1 0.03 6.4E-07 65.3 5.7 59 733-791 326-388 (401)
90 KOG4234|consensus 95.0 0.016 3.4E-07 60.7 2.9 36 434-469 92-127 (271)
91 KOG0547|consensus 94.8 0.018 3.9E-07 66.9 2.8 42 426-467 104-145 (606)
92 PLN02192 3-ketoacyl-CoA syntha 94.6 0.017 3.8E-07 68.8 2.2 142 4-166 97-267 (511)
93 PLN00415 3-ketoacyl-CoA syntha 94.3 0.054 1.2E-06 63.9 5.4 140 5-165 56-224 (466)
94 PLN03172 chalcone synthase fam 94.3 0.058 1.3E-06 62.8 5.6 59 733-791 322-384 (393)
95 PLN03173 chalcone synthase; Pr 93.8 0.054 1.2E-06 63.0 4.0 83 685-789 295-382 (391)
96 cd00825 decarbox_cond_enzymes 93.0 0.053 1.2E-06 60.6 2.2 84 682-785 220-326 (332)
97 KOG0553|consensus 92.2 0.077 1.7E-06 58.7 2.0 40 428-467 72-111 (304)
98 PLN02192 3-ketoacyl-CoA syntha 91.9 0.1 2.3E-06 62.3 3.0 49 735-786 426-474 (511)
99 PRK08313 acetyl-CoA acetyltran 91.7 0.16 3.6E-06 58.9 4.1 108 39-165 6-114 (386)
100 cd00825 decarbox_cond_enzymes 91.0 0.14 3.1E-06 57.2 2.7 98 41-166 5-125 (332)
101 PRK12578 acetyl-CoA acetyltran 91.0 0.2 4.4E-06 58.0 4.0 107 39-166 4-111 (385)
102 PLN02854 3-ketoacyl-CoA syntha 90.8 0.13 2.8E-06 61.8 2.1 50 735-787 438-487 (521)
103 cd00751 thiolase Thiolase are 90.4 0.34 7.3E-06 56.2 5.1 106 41-165 3-112 (386)
104 TIGR01930 AcCoA-C-Actrans acet 89.3 0.43 9.2E-06 55.4 4.8 107 41-166 2-112 (386)
105 PLN02854 3-ketoacyl-CoA syntha 89.0 0.29 6.3E-06 58.7 3.2 141 4-166 109-279 (521)
106 PLN00415 3-ketoacyl-CoA syntha 88.9 0.33 7.1E-06 57.5 3.4 52 733-787 382-433 (466)
107 PRK08235 acetyl-CoA acetyltran 88.2 0.64 1.4E-05 54.2 5.3 108 39-165 5-116 (393)
108 PRK06065 acetyl-CoA acetyltran 87.9 0.51 1.1E-05 55.0 4.2 110 37-166 10-120 (392)
109 cd00829 SCP-x_thiolase Thiolas 87.7 0.47 1E-05 54.4 3.8 105 41-166 1-106 (375)
110 PRK06064 acetyl-CoA acetyltran 87.3 0.54 1.2E-05 54.5 4.0 109 39-166 5-114 (389)
111 KOG0551|consensus 87.1 0.35 7.6E-06 54.3 2.1 76 427-522 74-151 (390)
112 PRK05656 acetyl-CoA acetyltran 86.6 0.68 1.5E-05 53.9 4.3 109 39-166 5-117 (393)
113 COG3424 BcsA Predicted naringe 86.2 1.3 2.7E-05 49.6 5.7 51 735-789 298-348 (356)
114 PRK09051 beta-ketothiolase; Pr 85.5 0.89 1.9E-05 53.1 4.5 109 39-165 6-118 (394)
115 PRK05790 putative acyltransfer 85.5 0.87 1.9E-05 52.9 4.4 108 39-166 5-117 (393)
116 PRK09052 acetyl-CoA acetyltran 85.0 1.1 2.3E-05 52.5 4.8 109 39-165 9-123 (399)
117 PRK06059 lipid-transfer protei 84.3 1.1 2.4E-05 52.2 4.5 107 39-166 7-114 (399)
118 PRK08242 acetyl-CoA acetyltran 83.9 0.97 2.1E-05 52.9 3.9 94 53-165 24-119 (402)
119 cd00826 nondecarbox_cond_enzym 83.6 1.5 3.2E-05 51.2 5.2 92 55-165 21-113 (393)
120 PRK06289 acetyl-CoA acetyltran 83.2 1.2 2.7E-05 51.9 4.4 110 39-166 6-119 (403)
121 TIGR02845 spore_V_AD stage V s 83.0 0.98 2.1E-05 51.1 3.3 87 55-167 48-135 (327)
122 PRK08170 acetyl-CoA acetyltran 82.9 1.5 3.2E-05 51.7 4.9 108 39-165 6-117 (426)
123 PRK07516 acetyl-CoA acetyltran 82.6 1.3 2.7E-05 51.5 4.1 108 39-166 5-114 (389)
124 PRK08304 stage V sporulation p 82.4 0.99 2.2E-05 51.2 3.0 85 56-166 55-140 (337)
125 PRK07108 acetyl-CoA acetyltran 81.7 1.4 3.1E-05 51.3 4.1 94 54-165 24-118 (392)
126 PF07719 TPR_2: Tetratricopept 80.5 0.75 1.6E-05 33.4 0.8 31 907-937 4-34 (34)
127 PRK06158 thiolase; Provisional 79.9 2 4.4E-05 49.8 4.6 106 32-162 4-109 (384)
128 PRK06954 acetyl-CoA acetyltran 79.8 2.2 4.8E-05 49.8 4.9 108 39-165 10-121 (397)
129 PRK06205 acetyl-CoA acetyltran 79.5 2.5 5.3E-05 49.5 5.1 108 39-165 5-116 (404)
130 PRK08256 lipid-transfer protei 79.5 2.1 4.6E-05 49.7 4.6 105 39-166 4-109 (391)
131 PF07719 TPR_2: Tetratricopept 79.1 1.6 3.4E-05 31.6 2.2 28 439-466 3-30 (34)
132 PRK06365 acetyl-CoA acetyltran 78.6 2.1 4.5E-05 50.6 4.2 108 39-165 19-127 (430)
133 PF00515 TPR_1: Tetratricopept 77.8 0.79 1.7E-05 33.6 0.2 31 907-937 4-34 (34)
134 PF00515 TPR_1: Tetratricopept 76.6 2.1 4.5E-05 31.3 2.2 28 439-466 3-30 (34)
135 PF13176 TPR_7: Tetratricopept 74.7 2.2 4.7E-05 32.2 1.9 27 441-467 3-29 (36)
136 KOG4642|consensus 73.5 1.9 4.1E-05 46.8 1.8 33 434-466 7-39 (284)
137 KOG0548|consensus 72.9 2.1 4.7E-05 50.8 2.2 30 436-465 357-386 (539)
138 KOG0550|consensus 72.6 1.7 3.7E-05 50.3 1.3 50 433-484 245-294 (486)
139 PF13414 TPR_11: TPR repeat; P 72.4 2.6 5.6E-05 35.7 2.1 30 437-466 3-32 (69)
140 PF08392 FAE1_CUT1_RppA: FAE1/ 72.2 2.7 5.8E-05 47.0 2.6 143 4-166 4-174 (290)
141 PRK12404 stage V sporulation p 72.1 2.9 6.4E-05 47.3 3.0 82 55-162 52-133 (334)
142 PLN02287 3-ketoacyl-CoA thiola 70.1 4.2 9E-05 48.5 3.8 110 38-165 48-162 (452)
143 KOG0546|consensus 66.7 3.1 6.8E-05 47.3 1.8 46 424-469 208-254 (372)
144 PRK06445 acetyl-CoA acetyltran 65.3 9.3 0.0002 44.6 5.4 109 39-165 5-123 (394)
145 PRK07851 acetyl-CoA acetyltran 64.6 7 0.00015 45.9 4.2 109 39-166 5-119 (406)
146 PF13414 TPR_11: TPR repeat; P 64.3 2.6 5.6E-05 35.7 0.4 40 896-935 29-69 (69)
147 COG3424 BcsA Predicted naringe 64.2 4.9 0.00011 45.1 2.6 133 11-162 4-162 (356)
148 PF14559 TPR_19: Tetratricopep 63.5 3 6.4E-05 35.1 0.6 42 896-937 17-58 (68)
149 PRK07801 acetyl-CoA acetyltran 59.7 12 0.00027 43.3 5.0 109 39-165 5-117 (382)
150 PRK08963 fadI 3-ketoacyl-CoA t 57.8 15 0.00031 43.5 5.3 108 39-165 8-119 (428)
151 TIGR02430 pcaF beta-ketoadipyl 57.3 13 0.00027 43.7 4.6 109 39-165 4-117 (400)
152 PRK06157 acetyl-CoA acetyltran 56.4 11 0.00024 44.0 4.0 107 39-166 10-117 (398)
153 PRK06366 acetyl-CoA acetyltran 56.0 15 0.00032 42.9 4.9 108 39-165 5-116 (388)
154 TIGR02446 FadI fatty oxidation 55.7 19 0.00041 42.7 5.7 108 38-165 9-121 (430)
155 PRK09050 beta-ketoadipyl CoA t 54.1 13 0.00029 43.5 4.1 108 39-165 5-118 (401)
156 PF13174 TPR_6: Tetratricopept 53.4 5.1 0.00011 28.6 0.3 31 907-937 3-33 (33)
157 PRK13359 beta-ketoadipyl CoA t 53.0 12 0.00026 43.9 3.5 93 55-165 24-118 (400)
158 PF02797 Chal_sti_synt_C: Chal 52.2 15 0.00033 37.2 3.7 59 733-791 85-147 (151)
159 PRK06147 3-oxoacyl-(acyl carri 51.9 12 0.00025 43.0 3.2 98 53-166 61-162 (348)
160 PRK08131 acetyl-CoA acetyltran 51.6 18 0.0004 42.4 4.7 109 39-165 5-117 (401)
161 PRK07850 acetyl-CoA acetyltran 50.3 17 0.00038 42.3 4.2 108 39-165 5-117 (387)
162 KOG0624|consensus 50.3 8.4 0.00018 43.9 1.5 29 910-938 313-341 (504)
163 PRK08947 fadA 3-ketoacyl-CoA t 48.7 23 0.00049 41.4 4.9 108 39-165 5-119 (387)
164 KOG0550|consensus 47.7 11 0.00024 43.9 2.0 38 430-467 42-79 (486)
165 PF13181 TPR_8: Tetratricopept 47.1 18 0.00039 26.1 2.4 29 438-466 2-30 (34)
166 PRK09268 acetyl-CoA acetyltran 46.8 27 0.00058 41.4 5.1 107 39-165 10-121 (427)
167 cd02682 MIT_AAA_Arch MIT: doma 46.4 23 0.00049 32.0 3.4 39 440-478 9-47 (75)
168 PF08545 ACP_syn_III: 3-Oxoacy 46.0 5.8 0.00013 35.4 -0.4 36 127-167 1-37 (80)
169 PRK07661 acetyl-CoA acetyltran 45.0 30 0.00065 40.4 5.1 109 39-165 5-118 (391)
170 TIGR02445 fadA fatty oxidation 44.4 38 0.00083 39.5 5.8 92 54-165 22-117 (385)
171 PRK06504 acetyl-CoA acetyltran 44.3 30 0.00064 40.5 4.9 109 39-165 5-117 (390)
172 PRK07855 lipid-transfer protei 43.2 24 0.00052 41.1 4.0 99 39-162 7-105 (386)
173 PF13181 TPR_8: Tetratricopept 41.9 9.1 0.0002 27.7 0.1 32 906-937 3-34 (34)
174 PF04212 MIT: MIT (microtubule 41.7 27 0.00058 30.3 3.1 36 440-475 8-43 (69)
175 PF13374 TPR_10: Tetratricopep 41.6 23 0.0005 26.4 2.4 32 439-470 4-35 (42)
176 PRK06633 acetyl-CoA acetyltran 41.5 27 0.00058 40.9 4.0 81 54-149 24-104 (392)
177 cd02683 MIT_1 MIT: domain cont 39.7 29 0.00064 31.2 3.1 39 438-476 7-45 (77)
178 PF00108 Thiolase_N: Thiolase, 39.1 19 0.00041 39.7 2.1 82 53-149 22-103 (264)
179 PF13428 TPR_14: Tetratricopep 38.8 15 0.00033 28.8 1.0 34 906-939 3-36 (44)
180 PF13371 TPR_9: Tetratricopept 38.1 19 0.0004 30.7 1.5 35 904-938 29-63 (73)
181 smart00028 TPR Tetratricopepti 37.8 16 0.00034 24.1 0.9 31 907-937 4-34 (34)
182 cd02684 MIT_2 MIT: domain cont 36.4 34 0.00074 30.6 2.9 42 435-476 4-45 (75)
183 PRK08142 acetyl-CoA acetyltran 36.3 39 0.00084 39.5 4.2 103 38-165 7-110 (388)
184 cd02678 MIT_VPS4 MIT: domain c 36.2 38 0.00082 30.1 3.2 42 435-476 4-45 (75)
185 smart00825 PKS_KS Beta-ketoacy 35.7 29 0.00063 40.4 3.1 95 57-166 87-199 (424)
186 TIGR00990 3a0801s09 mitochondr 35.2 17 0.00036 44.8 1.1 33 906-938 162-194 (615)
187 PF13424 TPR_12: Tetratricopep 35.0 32 0.00069 29.7 2.6 35 437-471 5-39 (78)
188 smart00745 MIT Microtubule Int 32.0 48 0.001 29.2 3.2 39 438-476 9-47 (77)
189 PLN03088 SGT1, suppressor of 31.2 32 0.0007 39.5 2.5 30 437-466 2-31 (356)
190 PF13432 TPR_16: Tetratricopep 30.9 29 0.00063 28.9 1.5 23 443-465 3-25 (65)
191 PF14853 Fis1_TPR_C: Fis1 C-te 30.8 25 0.00054 29.5 1.1 27 912-938 9-35 (53)
192 PLN02644 acetyl-CoA C-acetyltr 30.8 52 0.0011 38.5 4.1 105 39-162 4-111 (394)
193 cd02681 MIT_calpain7_1 MIT: do 30.4 43 0.00094 30.2 2.6 34 438-471 7-40 (76)
194 KOG0376|consensus 30.3 32 0.00069 40.9 2.2 31 436-466 3-33 (476)
195 PRK06066 acetyl-CoA acetyltran 30.1 44 0.00096 39.1 3.4 101 39-162 7-109 (385)
196 PF13432 TPR_16: Tetratricopep 30.1 22 0.00049 29.6 0.7 34 904-937 31-64 (65)
197 cd02656 MIT MIT: domain contai 29.1 58 0.0013 28.6 3.2 40 437-476 6-45 (75)
198 KOG0548|consensus 28.8 34 0.00075 41.1 2.1 30 437-466 2-31 (539)
199 cd00834 KAS_I_II Beta-ketoacyl 27.2 52 0.0011 37.9 3.3 35 127-166 155-190 (406)
200 PTZ00455 3-ketoacyl-CoA thiola 27.1 56 0.0012 38.9 3.6 101 54-165 45-148 (438)
201 PF08251 Mastoparan_2: Mastopa 25.9 19 0.00042 21.9 -0.3 12 895-906 2-13 (14)
202 PF00195 Chal_sti_synt_N: Chal 25.3 13 0.00028 40.3 -1.9 26 491-516 12-37 (226)
203 PRK08257 acetyl-CoA acetyltran 24.4 77 0.0017 38.4 4.1 45 39-83 7-55 (498)
204 PF13424 TPR_12: Tetratricopep 24.4 59 0.0013 28.0 2.4 37 432-468 41-77 (78)
205 KOG0551|consensus 23.8 26 0.00057 40.0 0.0 38 901-938 116-153 (390)
206 cd02677 MIT_SNX15 MIT: domain 21.9 83 0.0018 28.2 2.8 38 439-476 8-45 (75)
207 PRK15359 type III secretion sy 21.9 50 0.0011 32.7 1.6 33 906-938 94-126 (144)
208 PF13428 TPR_14: Tetratricopep 21.1 71 0.0015 24.9 2.0 25 442-466 6-30 (44)
209 PRK06501 3-oxoacyl-(acyl carri 20.6 1.1E+02 0.0025 36.0 4.5 35 127-166 169-204 (425)
210 KOG3852|consensus 20.1 33 0.0007 38.5 -0.2 26 868-901 117-142 (426)
No 1
>KOG1393|consensus
Probab=100.00 E-value=1.3e-69 Score=583.51 Aligned_cols=206 Identities=45% Similarity=0.682 Sum_probs=181.8
Q ss_pred CCCCCcccceeeeeeecCCccccHHHHHhhcCCCcccchhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhcc
Q psy11265 2 SHQWPENVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQ 81 (945)
Q Consensus 2 ~~~~~~~VGI~ai~~y~p~~yvd~~~L~~~~gv~~~Kyt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~ 81 (945)
...||.+|||.+|++|||++||||+|||+++||+.|||||||||.+|+||+++|||+|||+||+++||+||+||++.|||
T Consensus 5 ~~~~p~dvGI~aieiyfP~~yV~Q~elEk~d~vs~gKytIGLGq~~MgfcsdrEDi~Sl~ltvvs~Lmery~i~~~~IGR 84 (462)
T KOG1393|consen 5 ASNWPKDVGIIAIEIYFPSQYVDQEELEKFDGVSAGKYTIGLGQTQMGFCSDREDIISLSLTVVSRLMERYNIDPDSIGR 84 (462)
T ss_pred cccCccccceeEEEEEcCccccChhhHhhcCCccccceEeccCcceecccCchhhhhhhhHHHHHHHHHHhCCChhhcce
Confidence 34699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccccccccccchhhhhhc-----ccccccCccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCC
Q psy11265 82 LLQVESPEEYEQESWQLTEAEKLASI-----PKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVD 156 (945)
Q Consensus 82 l~~v~Te~~~~~s~wd~s~~d~sk~~-----~~l~~~Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~ 156 (945)
| +|||| |-+|+|||+ +++..+||. +.++. +..|||||||+| |.+|++||. ++.|+
T Consensus 85 L-EVGTE----------TiiDKSKSVKt~LMqLF~~sgNt-----dIEGi-DttnACYGGtaA-LfnavnWiE--SssWD 144 (462)
T KOG1393|consen 85 L-EVGTE----------TIIDKSKSVKTVLMQLFEESGNT-----DIEGI-DTTNACYGGTAA-LFNAVNWIE--SSSWD 144 (462)
T ss_pred E-Eecce----------eccccchHHHHHHHHHhhhcCCC-----ccccc-cccccccccHHH-HHHHhhhhh--hcccC
Confidence 9 99999 666666665 889999999 88884 999999999999 999999998 77899
Q ss_pred Ccceee-ecccccccccCCCCCCC-------------cceeec-cccccccccccCcccCCCCCCcc-ccCcc----hhH
Q psy11265 157 TLKTLV-TKLSDVQDRLDARRPVP-------------PAEFTR-ILAAKKENLHKYPFRSETPPGEY-LFDGS----YYL 216 (945)
Q Consensus 157 ~~~~LV-asdia~y~~~~~~~~t~-------------P~~~~~-~~~~~~~~~~~~Df~rP~~~~~~-~vdG~----~YL 216 (945)
|+.+|| |+|||+|..+++| ||. |.+|+. ..+. |.+|++|||+|+..+|+ .|||+ |||
T Consensus 145 Gr~aivV~gDIAvY~~G~aR-pTGGAgAVAmLIgPnApi~ferglr~t--hM~hayDFyKPdl~SEyPvVDGklSi~cYl 221 (462)
T KOG1393|consen 145 GRYAIVVCGDIAVYAKGNAR-PTGGAGAVAMLIGPNAPIIFERGLRAT--HMQHAYDFYKPDLLSEYPVVDGKLSIQCYL 221 (462)
T ss_pred CceeEEEEeeEEEecCCCCC-CCCCcceEEEEEcCCCceEecccchhh--hhhhhhhccCCCCCCcCceecCeehHHHHH
Confidence 999999 9999999996655 443 667775 4444 67888888888877776 58886 888
Q ss_pred HHHHHHHHHHHhhh
Q psy11265 217 ESIDDFHRRHYKKY 230 (945)
Q Consensus 217 ~~ld~~~~~y~~r~ 230 (945)
.++|.||..|.++.
T Consensus 222 ~Ald~cY~~~~kK~ 235 (462)
T KOG1393|consen 222 SALDRCYTVYRKKI 235 (462)
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888876664
No 2
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=100.00 E-value=2.6e-54 Score=476.22 Aligned_cols=260 Identities=27% Similarity=0.258 Sum_probs=232.9
Q ss_pred cccccccceeeccccccchhHhhhhcCcCcccccccccccccccCCCcchhhhhhhc-----------------------
Q psy11265 492 ENVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLT----------------------- 548 (945)
Q Consensus 492 ~~vGI~ai~~Y~P~~~l~~~el~~~~g~d~gKy~~Glgq~~msv~~~~EDivTma~~----------------------- 548 (945)
|.|||.++++|+|+++|+++||+++||+||+|+++||||.+|||++++||+||||+|
T Consensus 1 ~~iGI~~~g~y~p~~~i~~~ela~~~g~d~~k~~~gl~~~e~sv~~~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgT 80 (377)
T COG3425 1 MMIGIVGIGAYIPRYRIKLEELARAWGVDPEKIKKGLGVEEKSVPPWDEDAVTMAVEAARNALKRADIDPSKIGAVIVGS 80 (377)
T ss_pred CccccceEEEeccceEeeHHHHHhhcCCChHHhhhccccccccCCCCchhHHHHHHHHHHHHHhccCCCHHHCceEEEec
Confidence 579999999999999999999999999999999999999999999999999999999
Q ss_pred -----------------cCcchhhHHH---HHHHHhHHHHHHHHhCccccCCCcceeeecCCcceEEEec-ccccccccc
Q psy11265 549 -----------------LSIQCYLGAL---DACYQGYRAKAAKLTGKELSLGDFDAVLFHTPYCKLVQKS-LARLAYNDF 607 (945)
Q Consensus 549 -----------------Lsl~~~~~~l---daCy~~~~~~~al~~a~~~~l~~~~~v~~~~p~~kLV~as-~ary~~~~~ 607 (945)
|+++..+++. +|||+||+ ||++|. +||..+.-...||+++ +|+|.++|
T Consensus 81 ES~~d~~K~~at~v~~~lg~~~~~~~~d~~~AC~agT~---aL~~a~-------~~v~s~~~~~~LvI~sD~a~~~~~~- 149 (377)
T COG3425 81 ESGPDAVKPTATIVAEALGLNPSARAADVEFACYAGTA---ALQAAI-------GWVESGMISYGLVIGADTAQYAPGD- 149 (377)
T ss_pred CCCcccccchHHHHHHHhCCCCceehhhHHHHHHHHHH---HHHHHH-------HHHHcCCccceEEEeehhhccCCCc-
Confidence 7777777666 69999995 778787 8888887566799888 99999999
Q ss_pred ccccCcccccchhhhH------hhhcccC-cccccccccccccccccc-ccccccccchhchHHhhhhhhHHHhhhhccc
Q psy11265 608 ISATDRSQYEGAEAFA------HIKNLED-TYFNRDIEQYFMSHNLYR-TRLAYNDFISATDRTEYEGAEAFAHIKNLED 679 (945)
Q Consensus 608 ~~~~E~tqgaGAvA~l------~i~~~~~-~~~s~d~~Df~Rp~~~~~-~~~~~g~~s~~~y~~~~~~~~a~~~~~~~~~ 679 (945)
++|+|||||||||+ -+++++. ++||.|++||||| .++ .|.++|+||.++|+++++. ||..|.+..+
T Consensus 150 --~~E~t~GAGavA~lIg~n~~~~a~~~~~~syt~d~~DFwRp--~~~~yp~~dg~~s~~~Y~~~~~~--a~~~~~~k~g 223 (377)
T COG3425 150 --ALEYTAGAGAVAFLIGKNPPIVAEFEGTGSYTTDTPDFWRP--DGQPYPYVDGRFSEPAYFKHVEN--AAKGYMEKTG 223 (377)
T ss_pred --ccCccCCCceEEEEEccCCCeEEEecCceEEecCCCccccc--CCCcccccCceecHHHHHHHHHH--HHHHHHHHhC
Confidence 99999999999999 3444543 9999999999999 666 9999999999999999995 9999944333
Q ss_pred ccCCcchHHHHHHhCCCccchHHHHHHhhhccccccchhhHHHhhhcchHHHHhhhchhhhhccccCcccchhHHHHHHH
Q psy11265 680 TYFNRDIEQYFMSHNRTEYEGAEAFAHIKNLEDTYFNRDIEQYFMSHSKQSFERLTKPGLYLANLIGNMYTPSLYGCLVS 759 (945)
Q Consensus 680 ~~~~~~~~~~~~~H~p~~~m~~~a~~~l~~~e~~~~~~~~~~~~~~~~~~~~~~kv~psl~~~~~vGN~YTaSlyl~L~S 759 (945)
...+.+||+|||+||+||+.++++.++. . .++|.|++.++++|||+||||+||+|+|
T Consensus 224 --ls~~dfdy~vfH~P~~k~~~ka~k~l~~------~---------------~e~v~~~l~~~~~vGN~YtgS~~L~Las 280 (377)
T COG3425 224 --LSPDDFDYIVFHQPNGKFPKKAAKSLGF------K---------------EEQVKPGLVYPQRIGNTYTGSLLLGLAS 280 (377)
T ss_pred --CChhhhCeEEecCCCCchHHHHHHHhCc------c---------------HhhcCccchhhhhcCcccchhHHHHHHH
Confidence 2357889999999999999999999840 0 3889999999999999999999999999
Q ss_pred HhccCCccccCCCcEEEEEecCCCcccccccccccc
Q psy11265 760 LLIQTPWERLQGMSRIGLFSYGSDNIKALFRRGKAH 795 (945)
Q Consensus 760 lL~~~~~~~L~G~~rI~l~s~GsG~~~~~~~~~~~~ 795 (945)
+|++++ ++| +|||++|||||+.+++|++++..
T Consensus 281 ~L~~a~---~~G-~rIl~~SYGSGa~s~~fs~~v~~ 312 (377)
T COG3425 281 LLDNAK---LPG-DRILLFSYGSGAGSEAFSITVTD 312 (377)
T ss_pred HHhhcC---CCC-CEEEEEeeCCCcceeEEEEEecc
Confidence 999986 699 99999999999999999999844
No 3
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=100.00 E-value=1.7e-52 Score=480.87 Aligned_cols=285 Identities=38% Similarity=0.572 Sum_probs=242.7
Q ss_pred ccccccceeeccccccchhHhhhhcCcCcccccccccccccccCCCcchhhhhhhc------------------------
Q psy11265 493 NVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLT------------------------ 548 (945)
Q Consensus 493 ~vGI~ai~~Y~P~~~l~~~el~~~~g~d~gKy~~Glgq~~msv~~~~EDivTma~~------------------------ 548 (945)
+|||.+|++|+|..+|+.++|++++|++++||++|+||.+|+|++++||++|||++
T Consensus 1 ~vgI~~ig~y~P~~~v~~~eLa~~~g~~~~k~~~GI~~rr~av~~~~Ed~~tma~~AA~~lL~~a~id~~~Id~Liv~Te 80 (454)
T TIGR01833 1 DVGILALEIYFPSQYVDQAELEKYDGVSAGKYTIGLGQTKMGFCTDREDINSLCLTVVSKLMERYNIDYNQIGRLEVGTE 80 (454)
T ss_pred CcEEEEEEEeCCCeEEcHHHHHHhcCCCHHHheechhheecccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECC
Confidence 68999999999999999999999999999999999999999999999999999999
Q ss_pred ------cCcchhh--------------HHH-HHHHHhHHHHHHHHhCccccCCCcceeeecC-Ccc-eEEEec-cccccc
Q psy11265 549 ------LSIQCYL--------------GAL-DACYQGYRAKAAKLTGKELSLGDFDAVLFHT-PYC-KLVQKS-LARLAY 604 (945)
Q Consensus 549 ------Lsl~~~~--------------~~l-daCy~~~~~~~al~~a~~~~l~~~~~v~~~~-p~~-kLV~as-~ary~~ 604 (945)
.+..+++ ..+ .||||++ +||+.|. +||..+. |.+ .||+++ +++|..
T Consensus 81 S~~d~sps~a~~v~~lL~~lG~~~~~~fDi~~AC~G~t---~AL~~A~-------~~i~s~~~~~~~aLVV~sDia~y~~ 150 (454)
T TIGR01833 81 TIIDKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGT---AALFNAI-------NWIESSSWDGRYALVVAGDIAVYAK 150 (454)
T ss_pred CCCCCCCchHHHHHHHHHhcCCCCceEEeccccchhHH---HHHHHHH-------HHHHcCCcCCCeEEEEEeccccccC
Confidence 3333333 222 5999999 4777777 8887775 455 588777 999998
Q ss_pred cccccccCcccccchhhhH-----hhhccc---CccccccccccccccccccccccccccchhchHHhhhhhhHHHhhhh
Q psy11265 605 NDFISATDRSQYEGAEAFA-----HIKNLE---DTYFNRDIEQYFMSHNLYRTRLAYNDFISATDRTEYEGAEAFAHIKN 676 (945)
Q Consensus 605 ~~~~~~~E~tqgaGAvA~l-----~i~~~~---~~~~s~d~~Df~Rp~~~~~~~~~~g~~s~~~y~~~~~~~~a~~~~~~ 676 (945)
.+ .++|+|+|||||| .| .++ .++++.|++|||||.....+|+|||+||+.||+++++. +|.+|.+
T Consensus 151 ~~----~~~t~GaGAvAmLv~~~~~~-~~~~~~~~~~~~~~~DF~rP~~~~~~p~vdg~~S~~~Yl~a~~~--~y~~y~~ 223 (454)
T TIGR01833 151 GN----ARPTGGAGAVAMLIGPNAPI-VFERGLRGSHMQHAYDFYKPDLASEYPVVDGKLSIQCYLSALDR--CYKSYCK 223 (454)
T ss_pred CC----eeeccccceEEEEeccCccc-eecCccceEEEeecccccCCCCCCcccccCCccCHHHHHHHHHH--HHHHHHH
Confidence 74 6899999999999 42 244 38999999999999422227999999999999999995 9999944
Q ss_pred ccc---------ccCCcchHHHHHHhCCCccchHHHHHHhh-------------------------hccccccchhhHHH
Q psy11265 677 LED---------TYFNRDIEQYFMSHNRTEYEGAEAFAHIK-------------------------NLEDTYFNRDIEQY 722 (945)
Q Consensus 677 ~~~---------~~~~~~~~~~~~~H~p~~~m~~~a~~~l~-------------------------~~e~~~~~~~~~~~ 722 (945)
..+ .....+.+||++||+||+||+.|+|+.++ +.+++++++++++.
T Consensus 224 ~~~~a~~~~~~~~~~~~~dfd~~~fH~P~~km~~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (454)
T TIGR01833 224 KIEKQWGKSGGDRKFTLNDFDYMVFHSPYCKLVQKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKA 303 (454)
T ss_pred HHHHhhhhhccccCCCHhHcCEEeccCCcccHHHHHHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHH
Confidence 211 11334677889999999999999998775 23456778899999
Q ss_pred hhhcchHHHHhhhchhhhhccccCcccchhHHHHHHHHhccCCccccCCCcEEEEEecCCCcccccccccccc
Q psy11265 723 FMSHSKQSFERLTKPGLYLANLIGNMYTPSLYGCLVSLLIQTPWERLQGMSRIGLFSYGSDNIKALFRRGKAH 795 (945)
Q Consensus 723 ~~~~~~~~~~~kv~psl~~~~~vGN~YTaSlyl~L~SlL~~~~~~~L~G~~rI~l~s~GsG~~~~~~~~~~~~ 795 (945)
+..++++.|.+||+||+.++++||||||||+|++|+|||++++..+|+| +||||||||||+.++||++++.+
T Consensus 304 ~~~~~~~~~~~kv~ps~~~~~~vGN~YtaSlyl~L~Sll~~~~~~~~~g-~ri~~fSYGSG~~se~fs~~v~~ 375 (454)
T TIGR01833 304 FMKASKELFDKKTKPSLLVPNQVGNMYTASLYGCLASLLSSKSAQELAG-KRVGMFSYGSGLAASMFSLRVSQ 375 (454)
T ss_pred HHhhhhhhHHHhhcchhHHHHhcCchhhhHHHHHHHHHHhhCCccccCC-CEEEEEeccCCcceeeEEEEEeC
Confidence 9999999999999999999999999999999999999999886557899 99999999999999999999854
No 4
>KOG0545|consensus
Probab=100.00 E-value=7e-52 Score=426.81 Aligned_cols=155 Identities=35% Similarity=0.701 Sum_probs=147.2
Q ss_pred EEecCCCcccccccccc--cccccccchhhhhhhhhhhccccc-cccc-----------------hhhhhcc------CC
Q psy11265 777 LFSYGSDNIKALFRRGK--AHMNVWNCEEAGADLKRVAALDST-MLGP-----------------VSSMLKQ------LS 830 (945)
Q Consensus 777 l~s~GsG~~~~~~~~~~--~~~~~~~~~~a~~~l~r~~idds~-~~~p-----------------l~~m~~~------~~ 830 (945)
+++.|+|..++|.+|++ |||++.++++.+ ++||||| +|+| |.+|+++ |+
T Consensus 16 il~~G~g~l~e~~dGTrv~FHfrtl~~~e~~-----tviDDsRk~gkPmeiiiGkkFkL~VwE~il~tM~v~EvaqF~~d 90 (329)
T KOG0545|consen 16 ILHGGTGELPEFIDGTRVIFHFRTLKCDEER-----TVIDDSRKVGKPMEIIIGKKFKLEVWEIILTTMRVHEVAQFWCD 90 (329)
T ss_pred hccCCCccCccccCCceEEEEEEecccCccc-----ccccchhhcCCCeEEeeccccccHHHHHHHHHHhhhhHHHhhhh
Confidence 68999999999999998 999999999988 9999999 9999 8999999 99
Q ss_pred ceeeeecccchHHHHHhhcccCCCCCCCCceeeeec--c---ccChhhHHHHhhcCcceEEEE-----------------
Q psy11265 831 SKLVSAYPFVSKTLRDAAKHSADGTEQSKRHCCGVQ--M---HTGYEDLNELLKKSQDLTFTI----------------- 888 (945)
Q Consensus 831 ~~~~~~yp~vs~~~r~~~~~~~~~~~~~~~h~c~~~--~---~~gy~dl~~l~~~~~~l~f~~----------------- 888 (945)
++|+.+||||||||||+++|| ++++|++|||||+ + ++||+||||||+|||||+|+|
T Consensus 91 ~~~~vqYPfvsksLRdia~GK--~p~e~~~H~Cg~a~m~~~~glGyedLDeL~knPqpL~FviellqVe~P~qYq~e~Wq 168 (329)
T KOG0545|consen 91 TIHTVQYPFVSKSLRDIAQGK--DPTEWHRHCCGLANMFAYHGLGYEDLDELQKNPQPLVFVIELLQVEAPSQYQRETWQ 168 (329)
T ss_pred hhheeechhHHHHHHHHhcCC--CcchhhhhhhhhHHHHHhcCCChhhHHHHhhCCCceEeehhhhhccCchhhcccccc
Confidence 999999999999999999987 4466999999996 2 499999999999999999998
Q ss_pred ----------------------------------------------ecCCChhhHhhhcccccceehhhhhcccccchhH
Q psy11265 889 ----------------------------------------------EKPNDEDWKKLNDLKIPILLNYSQCKLDQKDYYS 922 (945)
Q Consensus 889 ----------------------------------------------ekp~~~~w~~l~~~~~pl~lny~qc~l~~~~yy~ 922 (945)
|||||+||++|++|+|||+||||||+|+.|||||
T Consensus 169 lsddeKmkav~~l~q~GN~lfk~~~ykEA~~~YreAi~~l~~L~lkEkP~e~eW~eLdk~~tpLllNy~QC~L~~~e~ye 248 (329)
T KOG0545|consen 169 LSDDEKMKAVPVLHQEGNRLFKLGRYKEASSKYREAIICLRNLQLKEKPGEPEWLELDKMITPLLLNYCQCLLKKEEYYE 248 (329)
T ss_pred CCchHhhhhhHHHHHhhhhhhhhccHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhhhHHHHhHHHHHhhHHHHHH
Confidence 4999999999999999999999999999999999
Q ss_pred HHHhhhhhhccCCCCc
Q psy11265 923 VIEHTTTVLTYDPEGT 938 (945)
Q Consensus 923 v~~h~~~~l~~~~~~~ 938 (945)
||||||+||++||+|.
T Consensus 249 vleh~seiL~~~~~nv 264 (329)
T KOG0545|consen 249 VLEHCSEILRHHPGNV 264 (329)
T ss_pred HHHHHHHHHhcCCchH
Confidence 9999999999999984
No 5
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=8.1e-51 Score=467.50 Aligned_cols=285 Identities=31% Similarity=0.444 Sum_probs=244.2
Q ss_pred ccccccccceeeccccccchhHhhhhcCcCcccccccccccccccCCCcchhhhhhhc----------------------
Q psy11265 491 PENVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLT---------------------- 548 (945)
Q Consensus 491 ~~~vGI~ai~~Y~P~~~l~~~el~~~~g~d~gKy~~Glgq~~msv~~~~EDivTma~~---------------------- 548 (945)
|++|||.+|++|+|+.+|+.++|++++|++++||++|+||++|+|++++||++|||++
T Consensus 2 ~~~vgI~gig~Y~P~~~v~n~eLa~~~g~~~~~~~~GI~~r~~ava~~~Ed~~tmA~~AA~~aL~~agid~~~Idlliva 81 (459)
T PLN02577 2 PKNVGILAMEVYFPPTCVQQEALEAHDGVSKGKYTIGLGQDCMAFCTDVEDVISMSLTVVKSLLEKYNIDPKQIGRLEVG 81 (459)
T ss_pred CCccEEEEEEEeCCCeEEcHHHHHHHhCCCHHHHhhccceeEeccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 7899999999999999999999999999999999999999999999999999999999
Q ss_pred --------cCcchhhH--------------HH-HHHHHhHHHHHHHHhCccccCCCcceeeecC-Ccc-eEEEec-cccc
Q psy11265 549 --------LSIQCYLG--------------AL-DACYQGYRAKAAKLTGKELSLGDFDAVLFHT-PYC-KLVQKS-LARL 602 (945)
Q Consensus 549 --------Lsl~~~~~--------------~l-daCy~~~~~~~al~~a~~~~l~~~~~v~~~~-p~~-kLV~as-~ary 602 (945)
.+..+++. .+ .||||++ +||+.|. +||..+. |++ .||+++ +++|
T Consensus 82 TeT~~d~~ps~A~~v~~ll~~LG~~~~~afDi~~AC~G~~---~AL~~A~-------~~i~sg~~~~~~aLVV~aD~a~~ 151 (459)
T PLN02577 82 SETVIDKSKSIKTFLMQLFEESGNTDIEGVDSTNACYGGT---AALLNCV-------NWVESSSWDGRYGLVVAADSAVY 151 (459)
T ss_pred cCCCCCCCCchHHHHHHHHHHhCCCCcEEeehhhhhHHHH---HHHHHHH-------HHHHcCCCCCCeEEEEEechhhc
Confidence 44444442 22 5999999 4777787 8888775 455 599887 9999
Q ss_pred cccccccccCcccccchhhhH----hhhcccC---cccccccccccccccccc--ccccccccchhchHHhhhhhhHHHh
Q psy11265 603 AYNDFISATDRSQYEGAEAFA----HIKNLED---TYFNRDIEQYFMSHNLYR--TRLAYNDFISATDRTEYEGAEAFAH 673 (945)
Q Consensus 603 ~~~~~~~~~E~tqgaGAvA~l----~i~~~~~---~~~s~d~~Df~Rp~~~~~--~~~~~g~~s~~~y~~~~~~~~a~~~ 673 (945)
..+ ++|+|+|+||+||| .-..++. |+++.|++||||| +++ .+.+||++|..||++++.. +|++
T Consensus 152 ~~~----~~e~t~GdGA~A~lv~~~~~~~l~~~~~g~~~~~~~Df~rP--~~~~~~~~vdG~~s~~~yl~~~~~--~~~~ 223 (459)
T PLN02577 152 AEG----PARPTGGAGAVAMLVGPNAPIVFESKYRGSHMAHVYDFYKP--DLASEYPVVDGKLSQTCYLMALDS--CYKR 223 (459)
T ss_pred cCC----CCCCCCCcceEEEEEccCCCceeecccccccCcccchhccc--CCCCCceEEcchHHHHHHHHHHHH--HHHH
Confidence 988 57999999999999 1123442 7999999999999 444 5899999999999999985 9999
Q ss_pred hhhcc-c---ccCCcchHHHHHHhCCCccchHHHHHHhh-------------------------hccccccchhhHHHhh
Q psy11265 674 IKNLE-D---TYFNRDIEQYFMSHNRTEYEGAEAFAHIK-------------------------NLEDTYFNRDIEQYFM 724 (945)
Q Consensus 674 ~~~~~-~---~~~~~~~~~~~~~H~p~~~m~~~a~~~l~-------------------------~~e~~~~~~~~~~~~~ 724 (945)
|.+.. . .....+.+||++||+||+||+.|+++.++ ++++++.++++++++.
T Consensus 224 ~~~k~~~~~~~g~~~~d~d~~vfHqP~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (459)
T PLN02577 224 FCEKYEKLEGKQFSISDADYFVFHAPYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQ 303 (459)
T ss_pred HHHHhhcccccCCCHHHcCEEEecCCccchhHHHHHHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHH
Confidence 93322 1 12334677899999999999999998874 1456678899999999
Q ss_pred hcchHHHHhhhchhhhhccccCcccchhHHHHHHHHhccCCccccCCCcEEEEEecCCCcccccccccccc
Q psy11265 725 SHSKQSFERLTKPGLYLANLIGNMYTPSLYGCLVSLLIQTPWERLQGMSRIGLFSYGSDNIKALFRRGKAH 795 (945)
Q Consensus 725 ~~~~~~~~~kv~psl~~~~~vGN~YTaSlyl~L~SlL~~~~~~~L~G~~rI~l~s~GsG~~~~~~~~~~~~ 795 (945)
..+++.|.+||+||+.++++||||||||+|++|+|||+++. ..|+| |||||||||||+.++||++++.+
T Consensus 304 ~~~~~~~~~kv~ps~~~~~~vGN~YTaSlyl~L~SlL~~~~-~~~~G-~rIg~fSYGSG~~se~fs~~v~~ 372 (459)
T PLN02577 304 QVAKPLYDAKVQPTTLIPKQVGNMYTASLYAALASLVHNKH-SELAG-KRILMFSYGSGLTATMFSLRLHE 372 (459)
T ss_pred HhhHHHHHHhhccHhHHHHhcCcccchHHHHHHHHHHhhcc-ccCCC-CEEEEEeecCCccceeEEEEEeC
Confidence 99999999999999999999999999999999999998763 35799 99999999999999999999854
No 6
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=100.00 E-value=7.4e-46 Score=372.24 Aligned_cols=154 Identities=34% Similarity=0.454 Sum_probs=127.0
Q ss_pred CCcccceeeeeeecCCccccHHHHHhhcCCCcccchhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhccccc
Q psy11265 5 WPENVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQ 84 (945)
Q Consensus 5 ~~~~VGI~ai~~y~p~~yvd~~~L~~~~gv~~~Kyt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~ 84 (945)
||++|||++|+||+|++|||++||+++||+||+||++||||++|+||+++||+||||+|||++||+|+++||++||+| +
T Consensus 1 ~p~~VGI~~i~~y~p~~~v~~~~La~~~g~d~~K~~~glgq~~~av~~~~ED~vTmA~nAa~~ll~~~~id~~~Ig~l-~ 79 (174)
T PF01154_consen 1 RPQNVGIDAIEFYIPRYYVDQEELAEARGVDPGKYTIGLGQEKMAVPPPDEDIVTMAANAAKPLLDRYNIDPDDIGRL-I 79 (174)
T ss_dssp --SSEEEEEEEEE-ESEEEEHHHHHHHTTS-TCHHHTTT--SEEEE--TTS-HHHHHHHHHHTTHHHHT-HHHHEEEE-E
T ss_pred CCccccEeEEEEecCceEecHHHHHHHhCCCHHHhhhhcCeeEEEeCCCcccHHHHHHHHHHHHHHHcCCCHHHccEE-E
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred ccCCcccccccccccchhhhhhc-----ccccccCccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcc
Q psy11265 85 VESPEEYEQESWQLTEAEKLASI-----PKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLK 159 (945)
Q Consensus 85 v~Te~~~~~s~wd~s~~d~sk~~-----~~l~~~Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~ 159 (945)
|||| |++|+|||+ ++|+++||+ ..|.+|+||||||||+| |++|++||+ ++.||+++
T Consensus 80 vgTE----------S~vD~sKs~~t~v~~ll~~s~~~------~~~~~e~k~ACygGTaA-L~~a~~~v~--s~~~~g~~ 140 (174)
T PF01154_consen 80 VGTE----------SGVDKSKSISTYVHQLLGLSGNP------DCRGVEMKQACYGGTAA-LQNAVNWVA--SSPWDGRK 140 (174)
T ss_dssp EE-S----------S-SBSSS-HHHHHHHHTTTTT-S------SSEEEEEESGGGHHHHH-HHHHHHHHC--STTSTTEE
T ss_pred Eecc----------ccccccccHHHHHHHHhCcCCCC------ceeeeehhhhhHHHHHH-HHHHHHHHh--cCCCCCCe
Confidence 9999 777777776 667776654 23678999999999999 999999998 77899999
Q ss_pred eee-ecccccccccCCCCCCC
Q psy11265 160 TLV-TKLSDVQDRLDARRPVP 179 (945)
Q Consensus 160 ~LV-asdia~y~~~~~~~~t~ 179 (945)
+|| +||||+|++++ .||||
T Consensus 141 aLVVasDiA~y~~g~-~e~Tq 160 (174)
T PF01154_consen 141 ALVVASDIARYDLGS-AEPTQ 160 (174)
T ss_dssp EEEEEEEEE--STTT-TGGG-
T ss_pred EEEEeccccccCCCC-ccccc
Confidence 999 99999999964 59998
No 7
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=100.00 E-value=4e-42 Score=379.78 Aligned_cols=225 Identities=16% Similarity=0.147 Sum_probs=198.4
Q ss_pred cccceeeeeeecCCccccHHHHHhhcCCCcccchhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhccccccc
Q psy11265 7 ENVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVE 86 (945)
Q Consensus 7 ~~VGI~ai~~y~p~~yvd~~~L~~~~gv~~~Kyt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~ 86 (945)
|.|||++|.+|+|++||+++||++++|+||+|+++||||.+|+|++.+||+||||+|||+++|+|+++||.+||+| +||
T Consensus 1 ~~iGI~~~g~y~p~~~i~~~ela~~~g~d~~k~~~gl~~~e~sv~~~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v-~vg 79 (377)
T COG3425 1 MMIGIVGIGAYIPRYRIKLEELARAWGVDPEKIKKGLGVEEKSVPPWDEDAVTMAVEAARNALKRADIDPSKIGAV-IVG 79 (377)
T ss_pred CccccceEEEeccceEeeHHHHHhhcCCChHHhhhccccccccCCCCchhHHHHHHHHHHHHHhccCCCHHHCceE-EEe
Confidence 6799999999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 87 SPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 87 Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
|| |++|++|+...+... +++.+++.+++|+++|||+||+| |++|+.||. ++.+ +++|| ++|
T Consensus 80 TE----------S~~d~~K~~at~v~~---~lg~~~~~~~~d~~~AC~agT~a-L~~a~~~v~--s~~~--~~~LvI~sD 141 (377)
T COG3425 80 SE----------SGPDAVKPTATIVAE---ALGLNPSARAADVEFACYAGTAA-LQAAIGWVE--SGMI--SYGLVIGAD 141 (377)
T ss_pred cC----------CCcccccchHHHHHH---HhCCCCceehhhHHHHHHHHHHH-HHHHHHHHH--cCCc--cceEEEeeh
Confidence 99 889999888544432 44445666999999999999999 999999997 5554 49999 999
Q ss_pred cccccccCCCCCCC------------cceeeccccccccccccCcccCCCCCCccccCcc----hhHHHHHHHHHHHHhh
Q psy11265 166 SDVQDRLDARRPVP------------PAEFTRILAAKKENLHKYPFRSETPPGEYLFDGS----YYLESIDDFHRRHYKK 229 (945)
Q Consensus 166 ia~y~~~~~~~~t~------------P~~~~~~~~~~~~~~~~~Df~rP~~~~~~~vdG~----~YL~~ld~~~~~y~~r 229 (945)
+|.|..++..|+|| |.......+...||.|++|||||.++.++.|||. +|+++++.+|+.|.+|
T Consensus 142 ~a~~~~~~~~E~t~GAGavA~lIg~n~~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k 221 (377)
T COG3425 142 TAQYAPGDALEYTAGAGAVAFLIGKNPPIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEK 221 (377)
T ss_pred hhccCCCcccCccCCCceEEEEEccCCCeEEEecCceEEecCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHH
Confidence 99999999999998 2222223334449999999999999988899997 9999999999999999
Q ss_pred hccCCCCCCccccceee-eecCCCcccccc
Q psy11265 230 YEAGTAWPENVGILGIE-FYFPSQYVDQTE 258 (945)
Q Consensus 230 ~~~~~~~~~~~gi~a~e-i~fh~p~v~m~e 258 (945)
.+. ..++++ ++||.|+.||..
T Consensus 222 ~gl--------s~~dfdy~vfH~P~~k~~~ 243 (377)
T COG3425 222 TGL--------SPDDFDYIVFHQPNGKFPK 243 (377)
T ss_pred hCC--------ChhhhCeEEecCCCCchHH
Confidence 865 346777 999999999975
No 8
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=5.1e-39 Score=365.74 Aligned_cols=291 Identities=26% Similarity=0.348 Sum_probs=231.3
Q ss_pred cccccceeeccccccchhHhhhhcCcCcccccccccccccccCCCcchhhhhhhc-------------------------
Q psy11265 494 VGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLT------------------------- 548 (945)
Q Consensus 494 vGI~ai~~Y~P~~~l~~~el~~~~g~d~gKy~~Glgq~~msv~~~~EDivTma~~------------------------- 548 (945)
|||.+|++|+|+.+|+.++|++++|++++||++|+|+.+|++++++||++|||++
T Consensus 1 iGI~~i~~y~P~~~v~~~ela~~~g~~~~~~~~g~G~~~~~~~~~~ed~~~la~~Aa~~aL~~a~~~~Id~li~~t~s~~ 80 (379)
T TIGR01835 1 IGIDKISFFTPQNYLDMTALAEARGVDPEKFHIGIGQKKMAVPPIDEDIVTMAASAAKPILDRNDKQKIDMVIFGTESGI 80 (379)
T ss_pred CCEeEEEEECCCEEeeHHHHHHHhCCCHHHHHhhcCceEEeeCCCCCCHHHHHHHHHHHHHHhCCHhhCCEEEEEeCCCC
Confidence 7999999999999999999999999999999999999999999999999999999
Q ss_pred -------------cCcchhhH--HH-HHHHHhHHHHHHHHhCccccCCCcceeeecCCcceEEEec-ccccccccccccc
Q psy11265 549 -------------LSIQCYLG--AL-DACYQGYRAKAAKLTGKELSLGDFDAVLFHTPYCKLVQKS-LARLAYNDFISAT 611 (945)
Q Consensus 549 -------------Lsl~~~~~--~l-daCy~~~~~~~al~~a~~~~l~~~~~v~~~~p~~kLV~as-~ary~~~~~~~~~ 611 (945)
|+++..+. .+ .+|++++. ||..|. +|+..++..+.||+++ +++|...+ ++
T Consensus 81 ~~~~s~a~~v~~~Lgl~~~~~~~dv~~aC~gg~~---aL~~A~-------~~i~s~~~~~aLVv~~D~a~~~~~~---~~ 147 (379)
T TIGR01835 81 DQSKAAAVYVHGLLGLQPFCRSFELKQACYGATA---ALQMAK-------GHVALSPDRKVLVIASDIAKYGLES---PG 147 (379)
T ss_pred CCCCCHHHHHHHHhCCCCCceEEEeccccHHHHH---HHHHHH-------HHHHcCCCCeEEEEEeehhhcccCC---CC
Confidence 66643332 33 69999994 777776 7787776656788777 99998776 78
Q ss_pred CcccccchhhhH-----hhhccc--Ccccccccccccccccccc-ccccccccchhchHHhhhhhhHHHhhhhcccccCC
Q psy11265 612 DRSQYEGAEAFA-----HIKNLE--DTYFNRDIEQYFMSHNLYR-TRLAYNDFISATDRTEYEGAEAFAHIKNLEDTYFN 683 (945)
Q Consensus 612 E~tqgaGAvA~l-----~i~~~~--~~~~s~d~~Df~Rp~~~~~-~~~~~g~~s~~~y~~~~~~~~a~~~~~~~~~~~~~ 683 (945)
++++|+||+||| .|+.++ .+.++.|++||||| .++ .+.++|++|..+|++++. .+++++.+..+ ..
T Consensus 148 ~~~~GdGA~A~Ll~~~~~i~~~~~~~~~~t~~~~df~~p--~~~~~~~v~g~~s~~~y~~~~~--~~~~~~l~~~g--~~ 221 (379)
T TIGR01835 148 EPTQGAGAVAMLVSADPKLLAINEDSVLYTDDIMDFWRP--NYSTTALVDGQYSNEQYLNAFE--NAWNDYAKRTG--LS 221 (379)
T ss_pred CccccCccEEEEEecCCCeeEEeccceeeecCCCCccCC--CCCCceeECcHHHHHHHHHHHH--HHHHHHHHHhC--CC
Confidence 999999999999 566554 37889999999999 445 788999999999999997 49998843222 33
Q ss_pred cchHHHHHHhCCCccchHHHHHHhhhccccccchhhHHHhhhcchHHHHhhhchhhhhccccCcccchhHHHHHHHHhcc
Q psy11265 684 RDIEQYFMSHNRTEYEGAEAFAHIKNLEDTYFNRDIEQYFMSHSKQSFERLTKPGLYLANLIGNMYTPSLYGCLVSLLIQ 763 (945)
Q Consensus 684 ~~~~~~~~~H~p~~~m~~~a~~~l~~~e~~~~~~~~~~~~~~~~~~~~~~kv~psl~~~~~vGN~YTaSlyl~L~SlL~~ 763 (945)
.+..+||+||+||++|+.++++.+++.-. . ...+.+...+++|+.+.+++||+||||+|++|+++|++
T Consensus 222 ~~did~~i~H~p~~~~~~k~~~~~l~~~~-~-----------~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l~~ 289 (379)
T TIGR01835 222 LADFAAFCFHVPFTKMGLKALRHILKKNY-E-----------DEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLLEN 289 (379)
T ss_pred HHHcCEEEECCCCCcHHHHHHHHHHhhcc-c-----------ccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHHHh
Confidence 45668899999999999999998741100 0 01345566678899999999999999999999999987
Q ss_pred CCccccCCCcEEEEEecCCCccccccccccccc--ccccchhhhhhh-hhhhccccc
Q psy11265 764 TPWERLQGMSRIGLFSYGSDNIKALFRRGKAHM--NVWNCEEAGADL-KRVAALDST 817 (945)
Q Consensus 764 ~~~~~L~G~~rI~l~s~GsG~~~~~~~~~~~~~--~~~~~~~a~~~l-~r~~idds~ 817 (945)
.. ...+| +||+|+|||||+.++||++++.+- ..++...-++.| +|..+++.+
T Consensus 290 ~~-~~~~G-d~ill~s~GsG~~ae~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~ 344 (379)
T TIGR01835 290 AF-EDTTG-DKIGLFSYGSGAVAEFFSGTLVAGYRDHLKKERHLALLKNRTNLSYAE 344 (379)
T ss_pred cc-cCCCC-CEEEEEEecCCcceeeEEEEEcccHHHHHhcccHHHHHhCCccCCHHH
Confidence 51 23499 999999999999999999998441 111111123445 666666655
No 9
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=100.00 E-value=8.7e-38 Score=359.40 Aligned_cols=228 Identities=40% Similarity=0.588 Sum_probs=192.7
Q ss_pred ccceeeeeeecCCccccHHHHHhhcCCCcccchhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhcccccccC
Q psy11265 8 NVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVES 87 (945)
Q Consensus 8 ~VGI~ai~~y~p~~yvd~~~L~~~~gv~~~Kyt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~T 87 (945)
||||++|++|+|+.+|++++|++++|+|++||++||||.+|+||+++||++|||++||++||++.+++|++|++| +|+|
T Consensus 1 ~vgI~~ig~y~P~~~v~~~eLa~~~g~~~~k~~~GI~~rr~av~~~~Ed~~tma~~AA~~lL~~a~id~~~Id~L-iv~T 79 (454)
T TIGR01833 1 DVGILALEIYFPSQYVDQAELEKYDGVSAGKYTIGLGQTKMGFCTDREDINSLCLTVVSKLMERYNIDYNQIGRL-EVGT 79 (454)
T ss_pred CcEEEEEEEeCCCeEEcHHHHHHhcCCCHHHheechhheecccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEC
Confidence 799999999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred Ccccccccccccchhhhhhcc-----cccccCccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee
Q psy11265 88 PEEYEQESWQLTEAEKLASIP-----KLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV 162 (945)
Q Consensus 88 e~~~~~s~wd~s~~d~sk~~~-----~l~~~Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV 162 (945)
| |+++.+|+.. +|.+.|+. -.+++|+++||+|+|.| |+.|..||+ ++.+|++++||
T Consensus 80 e----------S~~d~sps~a~~v~~lL~~lG~~------~~~~fDi~~AC~G~t~A-L~~A~~~i~--s~~~~~~~aLV 140 (454)
T TIGR01833 80 E----------TIIDKSKSVKTVLMQLFEESGNT------DVEGIDTTNACYGGTAA-LFNAINWIE--SSSWDGRYALV 140 (454)
T ss_pred C----------CCCCCCCchHHHHHHHHHhcCCC------CceEEeccccchhHHHH-HHHHHHHHH--cCCcCCCeEEE
Confidence 9 8888887663 33332321 12789999999999999 999999997 66678999999
Q ss_pred -ecccccccccCCCCCCC------------c-ceeecc-ccccccccccCcccCCCCCC-ccccCcc----hhHHHHHHH
Q psy11265 163 -TKLSDVQDRLDARRPVP------------P-AEFTRI-LAAKKENLHKYPFRSETPPG-EYLFDGS----YYLESIDDF 222 (945)
Q Consensus 163 -asdia~y~~~~~~~~t~------------P-~~~~~~-~~~~~~~~~~~Df~rP~~~~-~~~vdG~----~YL~~ld~~ 222 (945)
++|+++|+..+ .++|+ | .+|+.. .+ .++.|++|||||.+++ +++|||+ ||+++|+++
T Consensus 141 V~sDia~y~~~~-~~~t~GaGAvAmLv~~~~~~~~~~~~~~--~~~~~~~DF~rP~~~~~~p~vdg~~S~~~Yl~a~~~~ 217 (454)
T TIGR01833 141 VAGDIAVYAKGN-ARPTGGAGAVAMLIGPNAPIVFERGLRG--SHMQHAYDFYKPDLASEYPVVDGKLSIQCYLSALDRC 217 (454)
T ss_pred EEeccccccCCC-eeeccccceEEEEeccCccceecCccce--EEEeecccccCCCCCCcccccCCccCHHHHHHHHHHH
Confidence 99999999965 56665 3 345542 34 4899999999999977 6899997 999999999
Q ss_pred HHHHHhhhccCCC---CCCccccceee-eecCCCcccccc
Q psy11265 223 HRRHYKKYEAGTA---WPENVGILGIE-FYFPSQYVDQTE 258 (945)
Q Consensus 223 ~~~y~~r~~~~~~---~~~~~gi~a~e-i~fh~p~v~m~e 258 (945)
|.+|.++.+.-.. ......+++++ ++||.||.||..
T Consensus 218 y~~y~~~~~~a~~~~~~~~~~~~~dfd~~~fH~P~~km~~ 257 (454)
T TIGR01833 218 YKSYCKKIEKQWGKSGGDRKFTLNDFDYMVFHSPYCKLVQ 257 (454)
T ss_pred HHHHHHHHHHhhhhhccccCCCHhHcCEEeccCCcccHHH
Confidence 9999888652000 00124467788 999999999976
No 10
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=3.3e-36 Score=346.75 Aligned_cols=228 Identities=36% Similarity=0.549 Sum_probs=196.1
Q ss_pred CCcccceeeeeeecCCccccHHHHHhhcCCCcccchhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhccccc
Q psy11265 5 WPENVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQ 84 (945)
Q Consensus 5 ~~~~VGI~ai~~y~p~~yvd~~~L~~~~gv~~~Kyt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~ 84 (945)
.|++|||.+|++|+|+.+|+.+||++++|++++||++||||.+|+||+++||++|||++||+++|++.+++|++|++| +
T Consensus 1 ~~~~vgI~gig~Y~P~~~v~n~eLa~~~g~~~~~~~~GI~~r~~ava~~~Ed~~tmA~~AA~~aL~~agid~~~Idll-i 79 (459)
T PLN02577 1 MPKNVGILAMEVYFPPTCVQQEALEAHDGVSKGKYTIGLGQDCMAFCTDVEDVISMSLTVVKSLLEKYNIDPKQIGRL-E 79 (459)
T ss_pred CCCccEEEEEEEeCCCeEEcHHHHHHHhCCCHHHHhhccceeEeccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-E
Confidence 389999999999999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred ccCCcccccccccccchhhhhhccc-----ccc--cCccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCC
Q psy11265 85 VESPEEYEQESWQLTEAEKLASIPK-----LKE--DGNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDT 157 (945)
Q Consensus 85 v~Te~~~~~s~wd~s~~d~sk~~~~-----l~~--~Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~ 157 (945)
|+|| |+.|.+++... +.. ..++ +++|+++||+|+|.| |+.|..||+ ++.+|+
T Consensus 80 vaTe----------T~~d~~ps~A~~v~~ll~~LG~~~~--------~afDi~~AC~G~~~A-L~~A~~~i~--sg~~~~ 138 (459)
T PLN02577 80 VGSE----------TVIDKSKSIKTFLMQLFEESGNTDI--------EGVDSTNACYGGTAA-LLNCVNWVE--SSSWDG 138 (459)
T ss_pred EEcC----------CCCCCCCchHHHHHHHHHHhCCCCc--------EEeehhhhhHHHHHH-HHHHHHHHH--cCCCCC
Confidence 9999 88888888642 333 2334 789999999999999 999999997 666788
Q ss_pred cceee-ecccccccccCCCCCCC-------------cceeeccccccccccccCcccCCCCCCc-cccCcc----hhHHH
Q psy11265 158 LKTLV-TKLSDVQDRLDARRPVP-------------PAEFTRILAAKKENLHKYPFRSETPPGE-YLFDGS----YYLES 218 (945)
Q Consensus 158 ~~~LV-asdia~y~~~~~~~~t~-------------P~~~~~~~~~~~~~~~~~Df~rP~~~~~-~~vdG~----~YL~~ 218 (945)
+++|| +||+++|... +.++|+ |.+|+.... ..++.|++|||||+++.+ +.|||+ +|+++
T Consensus 139 ~~aLVV~aD~a~~~~~-~~e~t~GdGA~A~lv~~~~~~~l~~~~~-g~~~~~~~Df~rP~~~~~~~~vdG~~s~~~yl~~ 216 (459)
T PLN02577 139 RYGLVVAADSAVYAEG-PARPTGGAGAVAMLVGPNAPIVFESKYR-GSHMAHVYDFYKPDLASEYPVVDGKLSQTCYLMA 216 (459)
T ss_pred CeEEEEEechhhccCC-CCCCCCCcceEEEEEccCCCceeecccc-cccCcccchhcccCCCCCceEEcchHHHHHHHHH
Confidence 99999 9999999986 667776 234443221 138899999999999876 679997 99999
Q ss_pred HHHHHHHHHhhhccCCCCCCccccceee-eecCCCcccccc
Q psy11265 219 IDDFHRRHYKKYEAGTAWPENVGILGIE-FYFPSQYVDQTE 258 (945)
Q Consensus 219 ld~~~~~y~~r~~~~~~~~~~~gi~a~e-i~fh~p~v~m~e 258 (945)
++++|++|.++.+. .+ ...+.+++++ ++||.||.||..
T Consensus 217 ~~~~~~~~~~k~~~-~~-~~g~~~~d~d~~vfHqP~~km~~ 255 (459)
T PLN02577 217 LDSCYKRFCEKYEK-LE-GKQFSISDADYFVFHAPYNKLVQ 255 (459)
T ss_pred HHHHHHHHHHHhhc-cc-ccCCCHHHcCEEEecCCccchhH
Confidence 99999999998754 11 1234567788 999999999986
No 11
>KOG1393|consensus
Probab=100.00 E-value=2.5e-34 Score=310.93 Aligned_cols=291 Identities=35% Similarity=0.517 Sum_probs=254.6
Q ss_pred CCCCccccccccceeeccccccchhHhhhhcCcCcccccccccccccccCCCcchhhhhhhc------------------
Q psy11265 487 SHQWPENVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLT------------------ 548 (945)
Q Consensus 487 t~~~~~~vGI~ai~~Y~P~~~l~~~el~~~~g~d~gKy~~Glgq~~msv~~~~EDivTma~~------------------ 548 (945)
...||.+|||.+|++|+|..|++|+||++++|++.||||+||||.+|+||+++|||+||++|
T Consensus 5 ~~~~p~dvGI~aieiyfP~~yV~Q~elEk~d~vs~gKytIGLGq~~MgfcsdrEDi~Sl~ltvvs~Lmery~i~~~~IGR 84 (462)
T KOG1393|consen 5 ASNWPKDVGIIAIEIYFPSQYVDQEELEKFDGVSAGKYTIGLGQTQMGFCSDREDIISLSLTVVSRLMERYNIDPDSIGR 84 (462)
T ss_pred cccCccccceeEEEEEcCccccChhhHhhcCCccccceEeccCcceecccCchhhhhhhhHHHHHHHHHHhCCChhhcce
Confidence 45689999999999999999999999999999999999999999999999999999999999
Q ss_pred ------------cCcchhhHHH---------------HHHHHhHHHHHHHHhCccccCCCcceeeecC-Ccc-eEEEe-c
Q psy11265 549 ------------LSIQCYLGAL---------------DACYQGYRAKAAKLTGKELSLGDFDAVLFHT-PYC-KLVQK-S 598 (945)
Q Consensus 549 ------------Lsl~~~~~~l---------------daCy~~~~~~~al~~a~~~~l~~~~~v~~~~-p~~-kLV~a-s 598 (945)
+|+.+++..+ +|||||++ ||.+|. +||.+.+ .++ .||+. +
T Consensus 85 LEVGTETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttnACYGGta---ALfnav-------nWiESssWDGr~aivV~gD 154 (462)
T KOG1393|consen 85 LEVGTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTNACYGGTA---ALFNAV-------NWIESSSWDGRYAIVVCGD 154 (462)
T ss_pred EEecceeccccchHHHHHHHHHhhhcCCCccccccccccccccHH---HHHHHh-------hhhhhcccCCceeEEEEee
Confidence 7777777665 49999995 777777 8998888 565 57755 5
Q ss_pred cccccccccccccCcccccchhhhH----hhhcccC---ccccccccccccccccccccccccccchhchHHhhhhhhHH
Q psy11265 599 LARLAYNDFISATDRSQYEGAEAFA----HIKNLED---TYFNRDIEQYFMSHNLYRTRLAYNDFISATDRTEYEGAEAF 671 (945)
Q Consensus 599 ~ary~~~~~~~~~E~tqgaGAvA~l----~i~~~~~---~~~s~d~~Df~Rp~~~~~~~~~~g~~s~~~y~~~~~~~~a~ 671 (945)
||-|.-. +.-+|.|||||||| +...++. +++-....|||+|.-.+-.|+|||++|++||+.|++ .+|
T Consensus 155 IAvY~~G----~aRpTGGAgAVAmLIgPnApi~ferglr~thM~hayDFyKPdl~SEyPvVDGklSi~cYl~Ald--~cY 228 (462)
T KOG1393|consen 155 IAVYAKG----NARPTGGAGAVAMLIGPNAPIIFERGLRATHMQHAYDFYKPDLLSEYPVVDGKLSIQCYLSALD--RCY 228 (462)
T ss_pred EEEecCC----CCCCCCCcceEEEEEcCCCceEecccchhhhhhhhhhccCCCCCCcCceecCeehHHHHHHHHH--HHH
Confidence 9999887 67799999999999 5556664 889999999999954445999999999999999998 599
Q ss_pred Hhh-hhcccc---cCC--cchHHHHHHhCCCccchHHHHHHhh---------------------hccccccchhhHHHhh
Q psy11265 672 AHI-KNLEDT---YFN--RDIEQYFMSHNRTEYEGAEAFAHIK---------------------NLEDTYFNRDIEQYFM 724 (945)
Q Consensus 672 ~~~-~~~~~~---~~~--~~~~~~~~~H~p~~~m~~~a~~~l~---------------------~~e~~~~~~~~~~~~~ 724 (945)
..| +++..+ ... .+.|||++||.||+||+.|.+..++ +++++|++|+++|+++
T Consensus 229 ~~~~kK~~~~~~~~~~~~l~~fdy~ifHsP~cKlvqKs~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~ 308 (462)
T KOG1393|consen 229 TVYRKKIAAQWQKSGSDNLNSFDYIIFHSPYCKLVQKSLARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFI 308 (462)
T ss_pred HHHHHHHHHHhccccCcccccCCeEEEeCchhhhHHHHHHHhhhhhhhhccccccccccccccccccccccchHHHHHHH
Confidence 999 332221 111 2478999999999999999766543 4567889999999999
Q ss_pred hcchHHHHhhhchhhhhccccCcccchhHHHHHHHHhccCCccccCCCcEEEEEecCCCccccccccccc
Q psy11265 725 SHSKQSFERLTKPGLYLANLIGNMYTPSLYGCLVSLLIQTPWERLQGMSRIGLFSYGSDNIKALFRRGKA 794 (945)
Q Consensus 725 ~~~~~~~~~kv~psl~~~~~vGN~YTaSlyl~L~SlL~~~~~~~L~G~~rI~l~s~GsG~~~~~~~~~~~ 794 (945)
+++++.|.+|+.||+.+++++|||||+|+|++|+|||.....++|.| +||||||||||.+++||++.+.
T Consensus 309 ~~s~~~~~~Kt~~sl~~~~~~GNmYTaSly~~l~sll~~~~~d~l~G-krig~FSYGSGlAAs~fs~~v~ 377 (462)
T KOG1393|consen 309 KISKPIFKKKTKPSLLAPRRNGNMYTASLYASLASLLSAVPADELAG-KRIGMFSYGSGLAASMFSLRVT 377 (462)
T ss_pred HHhHHHHHhhccceeEeeccCCccccHHHHHHHHHHHhccchhhhhc-cEEEEEeecCcchhheEEEEec
Confidence 99999999999999999999999999999999999999987789999 9999999999999999999873
No 12
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=99.98 E-value=4.7e-34 Score=309.86 Aligned_cols=161 Identities=29% Similarity=0.412 Sum_probs=125.0
Q ss_pred cccccccccccccccccc-ccccccccchhchHHhhhhhhHHHhhhhcc-------cccCCcchHHHHHHhCCCccchHH
Q psy11265 631 TYFNRDIEQYFMSHNLYR-TRLAYNDFISATDRTEYEGAEAFAHIKNLE-------DTYFNRDIEQYFMSHNRTEYEGAE 702 (945)
Q Consensus 631 ~~~s~d~~Df~Rp~~~~~-~~~~~g~~s~~~y~~~~~~~~a~~~~~~~~-------~~~~~~~~~~~~~~H~p~~~m~~~ 702 (945)
|+|+.|+.|||||+ ..+ .|+|||++|++||+++++. +|..|++.. +.....+.+||++||.||+||+.|
T Consensus 9 ~~~m~~~yDFyKP~-~~seyP~VDG~~S~~~Yl~ald~--~y~~y~~k~~~~~~~~~~~~~l~~~d~~~fH~Py~klv~K 85 (282)
T PF08540_consen 9 GSHMEHVYDFYKPD-LSSEYPVVDGKLSIQCYLDALDK--CYKRYKEKVEKLANRGNKGTSLDDFDYVCFHSPYCKLVQK 85 (282)
T ss_dssp EEEE----SEE-BT-TT-SS-EE-HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHTSST--GGG-SEEEE--SSHHHHHH
T ss_pred eeehhhchhccCCC-CCCCCcEEchHHHHHHHHHHHHH--HHHHHHHHHHhhhcccCCCCCccccceEEEecCchHHHHH
Confidence 89999999999993 334 7999999999999999994 999994422 234556788999999999999999
Q ss_pred HHHHhh--------------------------hccccccchhhHHHhhhcchHHHHhhhchhhhhccccCcccchhHHHH
Q psy11265 703 AFAHIK--------------------------NLEDTYFNRDIEQYFMSHSKQSFERLTKPGLYLANLIGNMYTPSLYGC 756 (945)
Q Consensus 703 a~~~l~--------------------------~~e~~~~~~~~~~~~~~~~~~~~~~kv~psl~~~~~vGN~YTaSlyl~ 756 (945)
++..++ +.+++++++++++++.+.+++.|++||+||+.++++||||||||||++
T Consensus 86 a~~rl~~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~dr~lek~~~~~s~~~~~~kv~psl~~~~~vGN~YTaSly~~ 165 (282)
T PF08540_consen 86 AFARLLYNDFLRNPSSEEFEEIDAELAPFRDLPLEESYFDRDLEKAFMKASKEDFERKVEPSLLYSRQVGNMYTASLYLG 165 (282)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHCCHGGGTT--GGGHCTHHHHHHHHHHHHHHHHHHHCHHHTHHHHHHB--GGGHHHHH
T ss_pred HHHHHHHhhhhhccccccccccchhhhhhccCCcccccccHHHHHHHHHHHHHHHHHHHhHHHHHHHHcCceehHHHHHH
Confidence 977543 234566789999999999999999999999999999999999999999
Q ss_pred HHHHhccCCccccCCCcEEEEEecCCCcccccccccccc
Q psy11265 757 LVSLLIQTPWERLQGMSRIGLFSYGSDNIKALFRRGKAH 795 (945)
Q Consensus 757 L~SlL~~~~~~~L~G~~rI~l~s~GsG~~~~~~~~~~~~ 795 (945)
|+|||.+...++|.| +||||||||||+.++||++++..
T Consensus 166 L~SlL~~~~~~~l~G-krI~~FSYGSG~~s~~fs~~v~~ 203 (282)
T PF08540_consen 166 LASLLSSAEADDLAG-KRIGMFSYGSGLASEFFSGRVQP 203 (282)
T ss_dssp HHHHHHHHHSCHHTT--EEEEEEEETTTEEEEEEEEE-T
T ss_pred HHHHhhccCccccCC-CEEEEEEecCCcceeEEEEEEeC
Confidence 999996554568899 99999999999999999999843
No 13
>KOG0545|consensus
Probab=99.97 E-value=1.4e-31 Score=276.98 Aligned_cols=197 Identities=48% Similarity=0.853 Sum_probs=180.5
Q ss_pred CeEEEccCccccc-cccCcccCCCCCCEEEEEEEEEEecCCCcEEecCCCCCcCeEEEccccchhhhHHHHHhcCCCCcE
Q psy11265 268 GKYTIGLGQAKMG-FCSDLEDINSICLTVHFHFVTQLCDSDNTILDDSRKLGKPMQLVLGKKFKLEVWETLVKHMSIGEI 346 (945)
Q Consensus 268 gk~~~~~g~~~~~-~~~~~~~~P~~g~~V~VhY~g~l~~~dGtvfDsS~~~g~P~~f~lG~g~vI~G~e~~v~~M~~GE~ 346 (945)
-|.++..|.|.++ |+ .|.+|++||.....++.++++|+||..|+|+++++|+.+.++.||..|.+|+++|+
T Consensus 13 ~Kril~~G~g~l~e~~--------dGTrv~FHfrtl~~~e~~tviDDsRk~gkPmeiiiGkkFkL~VwE~il~tM~v~Ev 84 (329)
T KOG0545|consen 13 KKRILHGGTGELPEFI--------DGTRVIFHFRTLKCDEERTVIDDSRKVGKPMEIIIGKKFKLEVWEIILTTMRVHEV 84 (329)
T ss_pred hHhhccCCCccCcccc--------CCceEEEEEEecccCcccccccchhhcCCCeEEeeccccccHHHHHHHHHHhhhhH
Confidence 4778888877654 33 57899999999998888999999999999999999999999999999999999999
Q ss_pred EEEEecCCccccCCccchhhHhhhcccCCCCccccccccccc-c----cccccccccccCCCCcEEEEEEEEeeeCCchh
Q psy11265 347 SKFVCDKSLVSAYPFVSKTLRDAAKHSADGTEQSKRHCCGVQ-M----HTGYEDLNELLKKSQDLTFTIELLQVESPEEY 421 (945)
Q Consensus 347 a~~~i~pe~~~aYG~~~~~lr~i~~~g~~G~~~~~~~~~G~~-m----~~G~~~~~~~ipp~s~L~FeVELl~v~~p~~y 421 (945)
+.|.|....+..|+.+++.||++.. |++..+ ...||||+. | ..|+.+++++....++|+|.|||++|+.|++|
T Consensus 85 aqF~~d~~~~vqYPfvsksLRdia~-GK~p~e-~~~H~Cg~a~m~~~~glGyedLDeL~knPqpL~FviellqVe~P~qY 162 (329)
T KOG0545|consen 85 AQFWCDTIHTVQYPFVSKSLRDIAQ-GKDPTE-WHRHCCGLANMFAYHGLGYEDLDELQKNPQPLVFVIELLQVEAPSQY 162 (329)
T ss_pred HHhhhhhhheeechhHHHHHHHHhc-CCCcch-hhhhhhhhHHHHHhcCCChhhHHHHhhCCCceEeehhhhhccCchhh
Confidence 9999999998899999999999976 334332 467999994 4 39999999999999999999999999999999
Q ss_pred hhhhhccCHHHhhhccchhhHhcccccccccHHHHHHHHHHHHHHHHhhhhcc
Q psy11265 422 EQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLKQ 474 (945)
Q Consensus 422 ~ke~w~ms~eEkl~~a~~~Ke~GN~~fK~g~y~~A~~kY~rAl~~Le~~~~~e 474 (945)
.+++|+|+.+||+.+++.++++||.+||.|+|++|+.+|..|+.+|++++++|
T Consensus 163 q~e~WqlsddeKmkav~~l~q~GN~lfk~~~ykEA~~~YreAi~~l~~L~lkE 215 (329)
T KOG0545|consen 163 QRETWQLSDDEKMKAVPVLHQEGNRLFKLGRYKEASSKYREAIICLRNLQLKE 215 (329)
T ss_pred ccccccCCchHhhhhhHHHHHhhhhhhhhccHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999997
No 14
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=99.96 E-value=1.8e-29 Score=287.59 Aligned_cols=216 Identities=18% Similarity=0.209 Sum_probs=183.7
Q ss_pred cceeeeeeecCCccccHHHHHhhcCCCcccchhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhcccccccCC
Q psy11265 9 VGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESP 88 (945)
Q Consensus 9 VGI~ai~~y~p~~yvd~~~L~~~~gv~~~Kyt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te 88 (945)
|||++|++|+|+.||++++|++++|++++||++|+||++|+|+++.||+++||++||+++|++. +|++|+.| +|+|+
T Consensus 1 iGI~~i~~y~P~~~v~~~ela~~~g~~~~~~~~g~G~~~~~~~~~~ed~~~la~~Aa~~aL~~a--~~~~Id~l-i~~t~ 77 (379)
T TIGR01835 1 IGIDKISFFTPQNYLDMTALAEARGVDPEKFHIGIGQKKMAVPPIDEDIVTMAASAAKPILDRN--DKQKIDMV-IFGTE 77 (379)
T ss_pred CCEeEEEEECCCEEeeHHHHHHHhCCCHHHHHhhcCceEEeeCCCCCCHHHHHHHHHHHHHHhC--CHhhCCEE-EEEeC
Confidence 7999999999999999999999999999999999999999999999999999999999999996 89999999 89999
Q ss_pred cccccccccccchhhhhhc-----ccccccCccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-
Q psy11265 89 EEYEQESWQLTEAEKLASI-----PKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV- 162 (945)
Q Consensus 89 ~~~~~s~wd~s~~d~sk~~-----~~l~~~Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV- 162 (945)
|+.+.+++. ..|+.++++ +.+++++||+|++.| |..|..||+ + ++.+++||
T Consensus 78 ----------s~~~~~~s~a~~v~~~Lgl~~~~--------~~~dv~~aC~gg~~a-L~~A~~~i~--s--~~~~~aLVv 134 (379)
T TIGR01835 78 ----------SGIDQSKAAAVYVHGLLGLQPFC--------RSFELKQACYGATAA-LQMAKGHVA--L--SPDRKVLVI 134 (379)
T ss_pred ----------CCCCCCCCHHHHHHHHhCCCCCc--------eEEEeccccHHHHHH-HHHHHHHHH--c--CCCCeEEEE
Confidence 666665554 556666666 789999999999999 999999996 3 35689999
Q ss_pred ecccccccccCCCCCCC------------cceeeccccccccccccCcccCCCCCCccccCcc----hhHHHHHHHHHHH
Q psy11265 163 TKLSDVQDRLDARRPVP------------PAEFTRILAAKKENLHKYPFRSETPPGEYLFDGS----YYLESIDDFHRRH 226 (945)
Q Consensus 163 asdia~y~~~~~~~~t~------------P~~~~~~~~~~~~~~~~~Df~rP~~~~~~~vdG~----~YL~~ld~~~~~y 226 (945)
++|+++|....+.++++ |.+++.......++.+++|||||.++.++.|+|+ +|++++.++|++|
T Consensus 135 ~~D~a~~~~~~~~~~~~GdGA~A~Ll~~~~~i~~~~~~~~~~t~~~~df~~p~~~~~~~v~g~~s~~~y~~~~~~~~~~~ 214 (379)
T TIGR01835 135 ASDIAKYGLESPGEPTQGAGAVAMLVSADPKLLAINEDSVLYTDDIMDFWRPNYSTTALVDGQYSNEQYLNAFENAWNDY 214 (379)
T ss_pred EeehhhcccCCCCCccccCccEEEEEecCCCeeEEeccceeeecCCCCccCCCCCCceeECcHHHHHHHHHHHHHHHHHH
Confidence 99999998766666665 4333221222247889999999999877889997 8999999999999
Q ss_pred HhhhccCCCCCCccccceee-eecCCCcccccc
Q psy11265 227 YKKYEAGTAWPENVGILGIE-FYFPSQYVDQTE 258 (945)
Q Consensus 227 ~~r~~~~~~~~~~~gi~a~e-i~fh~p~v~m~e 258 (945)
.++.+. ..++++ +++|.|+.+|..
T Consensus 215 l~~~g~--------~~~did~~i~H~p~~~~~~ 239 (379)
T TIGR01835 215 AKRTGL--------SLADFAAFCFHVPFTKMGL 239 (379)
T ss_pred HHHhCC--------CHHHcCEEEECCCCCcHHH
Confidence 988743 456677 999999999853
No 15
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=99.95 E-value=3.7e-30 Score=259.03 Aligned_cols=120 Identities=40% Similarity=0.527 Sum_probs=95.8
Q ss_pred CccccccccceeeccccccchhHhhhhcCcCcccccccccccccccCCCcchhhhhhhc---------------------
Q psy11265 490 WPENVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLT--------------------- 548 (945)
Q Consensus 490 ~~~~vGI~ai~~Y~P~~~l~~~el~~~~g~d~gKy~~Glgq~~msv~~~~EDivTma~~--------------------- 548 (945)
||++|||++|++|+|++||++++|+++||+||+||++||||++|+||+++||+||||+|
T Consensus 1 ~p~~VGI~~i~~y~p~~~v~~~~La~~~g~d~~K~~~glgq~~~av~~~~ED~vTmA~nAa~~ll~~~~id~~~Ig~l~v 80 (174)
T PF01154_consen 1 RPQNVGIDAIEFYIPRYYVDQEELAEARGVDPGKYTIGLGQEKMAVPPPDEDIVTMAANAAKPLLDRYNIDPDDIGRLIV 80 (174)
T ss_dssp --SSEEEEEEEEE-ESEEEEHHHHHHHTTS-TCHHHTTT--SEEEE--TTS-HHHHHHHHHHTTHHHHT-HHHHEEEEEE
T ss_pred CCccccEeEEEEecCceEecHHHHHHHhCCCHHHhhhhcCeeEEEeCCCcccHHHHHHHHHHHHHHHcCCCHHHccEEEE
Confidence 68999999999999999999999999999999999999999999999999999999999
Q ss_pred -------------------cCc--chhhHHH---HHHHHhHHHHHHHHhCccccCCCcceeeecC-Ccce-EEEec-ccc
Q psy11265 549 -------------------LSI--QCYLGAL---DACYQGYRAKAAKLTGKELSLGDFDAVLFHT-PYCK-LVQKS-LAR 601 (945)
Q Consensus 549 -------------------Lsl--~~~~~~l---daCy~~~~~~~al~~a~~~~l~~~~~v~~~~-p~~k-LV~as-~ar 601 (945)
|++ +|+++.+ +|||+||+ ||++|. +||.++. |+++ ||++| +||
T Consensus 81 gTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k~ACygGTa---AL~~a~-------~~v~s~~~~g~~aLVVasDiA~ 150 (174)
T PF01154_consen 81 GTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMKQACYGGTA---ALQNAV-------NWVASSPWDGRKALVVASDIAR 150 (174)
T ss_dssp E-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEESGGGHHHH---HHHHHH-------HHHCSTTSTTEEEEEEEEEEE-
T ss_pred eccccccccccHHHHHHHHhCcCCCCceeeeehhhhhHHHHH---HHHHHH-------HHHhcCCCCCCeEEEEeccccc
Confidence 444 5555444 69999995 888888 9999986 7665 99887 999
Q ss_pred ccccccccccCcccccchhhhH
Q psy11265 602 LAYNDFISATDRSQYEGAEAFA 623 (945)
Q Consensus 602 y~~~~~~~~~E~tqgaGAvA~l 623 (945)
|+.++ .|+|||+||||||
T Consensus 151 y~~g~----~e~TqGAGAVAmL 168 (174)
T PF01154_consen 151 YDLGS----AEPTQGAGAVAML 168 (174)
T ss_dssp -STTT----TGGG-EEEEEEEE
T ss_pred cCCCC----ccccccceeEEEE
Confidence 99885 4999999999997
No 16
>KOG0544|consensus
Probab=99.94 E-value=6.7e-27 Score=208.51 Aligned_cols=94 Identities=31% Similarity=0.483 Sum_probs=87.1
Q ss_pred cCCCCCCEEEEEEEEEEecCCCcEEecCCCCCcCeEEEccccchhhhHHHHHhcCCCCcEEEEEecCCccccCCccchhh
Q psy11265 287 DINSICLTVHFHFVTQLCDSDNTILDDSRKLGKPMQLVLGKKFKLEVWETLVKHMSIGEISKFVCDKSLVSAYPFVSKTL 366 (945)
Q Consensus 287 ~~P~~g~~V~VhY~g~l~~~dGtvfDsS~~~g~P~~f~lG~g~vI~G~e~~v~~M~~GE~a~~~i~pe~~~aYG~~~~~l 366 (945)
..|.+|++|+|||+|.| .||++||||++|++||.|+||.|+||+|||+++..|.+||+++++|.|+| |||.
T Consensus 15 tfpK~Gqtvt~hYtg~L--~dG~kfDSs~dr~kPfkf~IGkgeVIkGwdegv~qmsvGekakLti~pd~--aYG~----- 85 (108)
T KOG0544|consen 15 TFPKKGQTVTVHYTGTL--QDGKKFDSSRDRGKPFKFKIGKGEVIKGWDEGVAQMSVGEKAKLTISPDY--AYGP----- 85 (108)
T ss_pred ccCCCCCEEEEEEEeEe--cCCcEeecccccCCCeeEEecCcceeechhhcchhccccccceeeecccc--ccCC-----
Confidence 68999999999999999 69999999999999999999999999999999999999999999999999 9998
Q ss_pred HhhhcccCCCCcccccccccccccccccccccccCCCCcEEEEEEEEeee
Q psy11265 367 RDAAKHSADGTEQSKRHCCGVQMHTGYEDLNELLKKSQDLTFTIELLQVE 416 (945)
Q Consensus 367 r~i~~~g~~G~~~~~~~~~G~~m~~G~~~~~~~ipp~s~L~FeVELl~v~ 416 (945)
.|.+ ..||||++|+|||||++++
T Consensus 86 --------~G~p-------------------~~IppNatL~FdVEll~v~ 108 (108)
T KOG0544|consen 86 --------RGHP-------------------GGIPPNATLVFDVELLKVN 108 (108)
T ss_pred --------CCCC-------------------CccCCCcEEEEEEEEEecC
Confidence 2321 3599999999999999873
No 17
>KOG0543|consensus
Probab=99.92 E-value=4.3e-25 Score=244.60 Aligned_cols=163 Identities=27% Similarity=0.392 Sum_probs=137.9
Q ss_pred cccccccCCCeEEEccCccccccccCcccCCCCCCEEEEEEEEEEecCCCcEEecCCCCCcCeEEEccc-cchhhhHHHH
Q psy11265 259 LEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLTVHFHFVTQLCDSDNTILDDSRKLGKPMQLVLGK-KFKLEVWETL 337 (945)
Q Consensus 259 le~~d~~~~gk~~~~~g~~~~~~~~~~~~~P~~g~~V~VhY~g~l~~~dGtvfDsS~~~g~P~~f~lG~-g~vI~G~e~~ 337 (945)
++.+|+ ..-|.++..|.+. ..+|..|..|+|||.|++ .++ +|+++. ..|+|.+|+ ..||.|||.+
T Consensus 79 ~el~Dg-~iiKriir~G~gd-------~~~P~~g~~V~v~~~G~~--~~~-~f~~~~---~~fe~~~Ge~~~vi~Gle~a 144 (397)
T KOG0543|consen 79 VELLDG-GIIKRIIREGEGD-------YSRPNKGAVVKVHLEGEL--EDG-VFDQRE---LRFEFGEGEDIDVIEGLEIA 144 (397)
T ss_pred ecccCC-ceEEeeeecCCCC-------CCCCCCCcEEEEEEEEEE--CCc-ceeccc---cceEEecCCccchhHHHHHH
Confidence 333344 2347777777653 358999999999999999 455 998764 459999999 6899999999
Q ss_pred HhcCCCCcEEEEEecCCccccCCccchhhHhhhcccCCCCcccccccccccccccccccccccCCCCcEEEEEEEEeeeC
Q psy11265 338 VKHMSIGEISKFVCDKSLVSAYPFVSKTLRDAAKHSADGTEQSKRHCCGVQMHTGYEDLNELLKKSQDLTFTIELLQVES 417 (945)
Q Consensus 338 v~~M~~GE~a~~~i~pe~~~aYG~~~~~lr~i~~~g~~G~~~~~~~~~G~~m~~G~~~~~~~ipp~s~L~FeVELl~v~~ 417 (945)
|..|++||++.|+|+|+| |||.. .+. .+.||||++|.|||||++|+.
T Consensus 145 l~~M~~GE~a~v~i~~~Y--ayG~~------------~~~-------------------~p~IPPnA~l~yEVeL~~f~~ 191 (397)
T KOG0543|consen 145 LRMMKVGEVALVTIDPKY--AYGEE------------GGE-------------------PPLIPPNATLLYEVELLDFEL 191 (397)
T ss_pred HHhcCccceEEEEeCccc--ccCCC------------CCC-------------------CCCCCCCceEEEEEEEEeeec
Confidence 999999999999999999 99951 111 146999999999999999993
Q ss_pred CchhhhhhhccCHHHhhhccchhhHhcccccccccHHHHHHHHHHHHHHHHhhh
Q psy11265 418 PEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLM 471 (945)
Q Consensus 418 p~~y~ke~w~ms~eEkl~~a~~~Ke~GN~~fK~g~y~~A~~kY~rAl~~Le~~~ 471 (945)
. ..+.|.|..+||+++|.++|++||.+||+|+|..|+.+|+||+.+|++..
T Consensus 192 ~---~~~s~~~~~~e~l~~A~~~ke~Gn~~fK~gk~~~A~~~Yerav~~l~~~~ 242 (397)
T KOG0543|consen 192 K---EDESWKMFAEERLEAADRKKERGNVLFKEGKFKLAKKRYERAVSFLEYRR 242 (397)
T ss_pred C---cccccccchHHHHHHHHHHHHhhhHHHhhchHHHHHHHHHHHHHHhhccc
Confidence 2 68999999999999999999999999999999999999999999998643
No 18
>COG0545 FkpA FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]
Probab=99.88 E-value=1.2e-22 Score=207.37 Aligned_cols=95 Identities=27% Similarity=0.411 Sum_probs=86.4
Q ss_pred cCcccCCCCCCEEEEEEEEEEecCCCcEEecCCCCCcCeEEEccccchhhhHHHHHhcCCCCcEEEEEecCCccccCCcc
Q psy11265 283 SDLEDINSICLTVHFHFVTQLCDSDNTILDDSRKLGKPMQLVLGKKFKLEVWETLVKHMSIGEISKFVCDKSLVSAYPFV 362 (945)
Q Consensus 283 ~~~~~~P~~g~~V~VhY~g~l~~~dGtvfDsS~~~g~P~~f~lG~g~vI~G~e~~v~~M~~GE~a~~~i~pe~~~aYG~~ 362 (945)
.|.|..|..|++|+|||+|+| .||++||||++|++|+.|.|| +||+||++||..|++|++++|+|||++ |||.
T Consensus 110 ~G~G~~~~~~~~V~vhY~G~l--~~G~vFDsS~~rg~p~~f~l~--~vI~Gw~egl~~M~vG~k~~l~IP~~l--aYG~- 182 (205)
T COG0545 110 AGDGAAPKKGDTVTVHYTGTL--IDGTVFDSSYDRGQPAEFPLG--GVIPGWDEGLQGMKVGGKRKLTIPPEL--AYGE- 182 (205)
T ss_pred ccCCCCCCCCCEEEEEEEEec--CCCCccccccccCCCceeecC--CeeehHHHHHhhCCCCceEEEEeCchh--ccCc-
Confidence 345678999999999999999 699999999999999999998 999999999999999999999999999 9998
Q ss_pred chhhHhhhcccCCCCcccccccccccccccccccccccCCCCcEEEEEEEEee
Q psy11265 363 SKTLRDAAKHSADGTEQSKRHCCGVQMHTGYEDLNELLKKSQDLTFTIELLQV 415 (945)
Q Consensus 363 ~~~lr~i~~~g~~G~~~~~~~~~G~~m~~G~~~~~~~ipp~s~L~FeVELl~v 415 (945)
+|.+ ..||||++|+|||||++|
T Consensus 183 ------------~g~~-------------------g~Ippns~LvFeVeLl~v 204 (205)
T COG0545 183 ------------RGVP-------------------GVIPPNSTLVFEVELLDV 204 (205)
T ss_pred ------------CCCC-------------------CCCCCCCeEEEEEEEEec
Confidence 3321 239999999999999987
No 19
>KOG0549|consensus
Probab=99.87 E-value=5.4e-22 Score=198.49 Aligned_cols=94 Identities=28% Similarity=0.432 Sum_probs=87.0
Q ss_pred CCCCCCEEEEEEEEEEecCCCcEEecCCCCCcCeEEEccccchhhhHHHHHhcCCCCcEEEEEecCCccccCCccchhhH
Q psy11265 288 INSICLTVHFHFVTQLCDSDNTILDDSRKLGKPMQLVLGKKFKLEVWETLVKHMSIGEISKFVCDKSLVSAYPFVSKTLR 367 (945)
Q Consensus 288 ~P~~g~~V~VhY~g~l~~~dGtvfDsS~~~g~P~~f~lG~g~vI~G~e~~v~~M~~GE~a~~~i~pe~~~aYG~~~~~lr 367 (945)
+...||++++||+|.| +||++||||+.|++|++|+||.|+||+|||+++.+|++||+++++|||++ +||.
T Consensus 84 kak~GD~l~~HY~g~l--eDGt~fdSS~~rg~P~~f~LG~gqVIkG~Dqgl~gMCvGEkRkl~IPp~L--gYG~------ 153 (188)
T KOG0549|consen 84 KAKKGDTLHVHYTGSL--EDGTKFDSSYSRGAPFTFTLGTGQVIKGWDQGLLGMCVGEKRKLIIPPHL--GYGE------ 153 (188)
T ss_pred cccCCCEEEEEEEEEe--cCCCEEeeeccCCCCEEEEeCCCceeccHhHHhhhhCcccceEEecCccc--cCcc------
Confidence 4568999999999988 69999999999999999999999999999999999999999999999999 9998
Q ss_pred hhhcccCCCCcccccccccccccccccccccccCCCCcEEEEEEEEeeeC
Q psy11265 368 DAAKHSADGTEQSKRHCCGVQMHTGYEDLNELLKKSQDLTFTIELLQVES 417 (945)
Q Consensus 368 ~i~~~g~~G~~~~~~~~~G~~m~~G~~~~~~~ipp~s~L~FeVELl~v~~ 417 (945)
+|++ .-||++++|+|+|||+++.+
T Consensus 154 -------~G~~-------------------~~IP~~A~LiFdiELv~i~~ 177 (188)
T KOG0549|consen 154 -------RGAP-------------------PKIPGDAVLIFDIELVKIER 177 (188)
T ss_pred -------CCCC-------------------CCCCCCeeEEEEEEEEEeec
Confidence 4443 12999999999999999987
No 20
>PRK04262 hypothetical protein; Provisional
Probab=99.77 E-value=4.9e-19 Score=199.81 Aligned_cols=280 Identities=20% Similarity=0.165 Sum_probs=194.6
Q ss_pred cccccccceeeccccccchhHhhhhcCcCcccccccccccccccCCCcchhhhhhhc-----------------------
Q psy11265 492 ENVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLT----------------------- 548 (945)
Q Consensus 492 ~~vGI~ai~~Y~P~~~l~~~el~~~~g~d~gKy~~Glgq~~msv~~~~EDivTma~~----------------------- 548 (945)
|+|+|.+++.|+|..+++.++|++..+.+++++...+|..++.+++++|+..+||+.
T Consensus 1 ~~v~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s 80 (347)
T PRK04262 1 MMVGIVGYGAYIPRYRIKVEEIARVWGDDPEAIKRGLGVEEKSVPGPDEDTATIAVEAARNALKRAGIDPKEIGAVYVGS 80 (347)
T ss_pred CceeEEEEEEeCCCEEecHHHHHHHhCcCHHHHhhccCeeeeecCCCCcCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 578999999999999999999999999999989889999999999999999999998
Q ss_pred -----------------cCcc--hhhHHH-HHHHHhHHHHHHHHhCccccCCCcceeeecCCcceEEEec-ccccccccc
Q psy11265 549 -----------------LSIQ--CYLGAL-DACYQGYRAKAAKLTGKELSLGDFDAVLFHTPYCKLVQKS-LARLAYNDF 607 (945)
Q Consensus 549 -----------------Lsl~--~~~~~l-daCy~~~~~~~al~~a~~~~l~~~~~v~~~~p~~kLV~as-~ary~~~~~ 607 (945)
|++. +....+ .+|.++.. ++..|. .++..+.....||+.+ .+++...+
T Consensus 81 ~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~~~C~~~~~---aL~~A~-------~~i~sg~~~~aLVv~~e~~~~~~~~- 149 (347)
T PRK04262 81 ESHPYAVKPTATIVAEALGATPDLTAADLEFACKAGTA---ALQAAM-------GLVKSGMIKYALAIGADTAQGAPGD- 149 (347)
T ss_pred cCCCcccccHHHHHHHHcCCCCCceEEEHHHhHHHHHH---HHHHHH-------HHHHcCCCCEEEEEEEeeeccCCCC-
Confidence 4443 222223 58998874 666565 5566554445687766 76666666
Q ss_pred ccccCcccccchhhhH-----hhhcccC-ccccccccccccccccccccccccccch-hchHHhhhhhhHHHhhhhcccc
Q psy11265 608 ISATDRSQYEGAEAFA-----HIKNLED-TYFNRDIEQYFMSHNLYRTRLAYNDFIS-ATDRTEYEGAEAFAHIKNLEDT 680 (945)
Q Consensus 608 ~~~~E~tqgaGAvA~l-----~i~~~~~-~~~s~d~~Df~Rp~~~~~~~~~~g~~s~-~~y~~~~~~~~a~~~~~~~~~~ 680 (945)
..+.+.|+||+|++ ...++.. .+++.|..|+||+. ....+.....++. ..|.+.+. .++..+ +...
T Consensus 150 --~~~~~~GDGA~A~ll~~~~~~~~i~~~~~~~~d~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~i~~~--L~~~ 222 (347)
T PRK04262 150 --ALEYTAAAGGAAFIIGKEEVIAEIEATYSYTTDTPDFWRRE-GEPYPRHGGRFTGEPAYFKHII--SAAKGL--MEKL 222 (347)
T ss_pred --CCCCcCCCCcEEEEEecCcccceeeccccccccchhhcCCC-CCcCCCcCceecchHHHHHHHH--HHHHHH--HHHh
Confidence 45677899999987 1223333 34567889999862 1112222222222 24555443 366555 1122
Q ss_pred cCCcchHHHHHHhCCCccchHHHHHHhhhccccccchhhHHHhhhcchHHHHhhhchhhhhccccCcccchhHHHHHHHH
Q psy11265 681 YFNRDIEQYFMSHNRTEYEGAEAFAHIKNLEDTYFNRDIEQYFMSHSKQSFERLTKPGLYLANLIGNMYTPSLYGCLVSL 760 (945)
Q Consensus 681 ~~~~~~~~~~~~H~p~~~m~~~a~~~l~~~e~~~~~~~~~~~~~~~~~~~~~~kv~psl~~~~~vGN~YTaSlyl~L~Sl 760 (945)
....+..++|++|+|..+|.....+.+ .++. .|+..+. ..+++||+++||++++|.++
T Consensus 223 gl~~~dId~~v~Hq~n~~~~~~~~~~L-----------------gl~~----ek~~~~~-~~~~~GNt~sAsi~~~L~~~ 280 (347)
T PRK04262 223 GLKPSDYDYAVFHQPNGKFPLRVAKML-----------------GFTK----EQVKPGL-LTPYIGNTYSGSALLGLAAV 280 (347)
T ss_pred CcCHHHhceeecCCCchHHHHHHHHHc-----------------CCCH----HHhhccc-hhhhhCChHHHHHHHHHHHH
Confidence 344456688999999988876655544 2222 3344344 34899999999999999999
Q ss_pred hccCCccccCCCcEEEEEecCCCccccccccccc---cccc-ccchhhhhhh-hhhhccccc
Q psy11265 761 LIQTPWERLQGMSRIGLFSYGSDNIKALFRRGKA---HMNV-WNCEEAGADL-KRVAALDST 817 (945)
Q Consensus 761 L~~~~~~~L~G~~rI~l~s~GsG~~~~~~~~~~~---~~~~-~~~~~a~~~l-~r~~idds~ 817 (945)
++.. .+| ++|+|++||.|...+++.+++. |.+. |+. ....+| +|..+++++
T Consensus 281 ~~~~----~~G-d~vll~~~G~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~ 336 (347)
T PRK04262 281 LDVA----KPG-DRILVVSFGSGAGSDAFSITVTDAIEEKRDLAP-TVEDYLERKKYIDYAV 336 (347)
T ss_pred HHhC----CCC-CEEEEEecCCCcceeeEEEEechhHHHhhhccc-cHHHHHhCCccCCHHH
Confidence 9742 289 9999999999999999998773 3332 433 234456 777777776
No 21
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=99.75 E-value=9.5e-19 Score=197.45 Aligned_cols=279 Identities=18% Similarity=0.118 Sum_probs=189.9
Q ss_pred ccccccceeeccccccchhHhhhhcCcCcccccccccccccccCCCcchhhhhhhc------------------------
Q psy11265 493 NVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLT------------------------ 548 (945)
Q Consensus 493 ~vGI~ai~~Y~P~~~l~~~el~~~~g~d~gKy~~Glgq~~msv~~~~EDivTma~~------------------------ 548 (945)
++||.+++.|+|..+++-+++++..+.+++++..++|.+++++++++|+..+||+.
T Consensus 1 ~~~I~g~g~~lP~~~v~n~~l~~~~~~~~~~i~~~~Gi~~r~v~~~~~~~~~la~~Aa~~aL~~agl~~~dID~li~~s~ 80 (345)
T TIGR00748 1 MAGIVGYGAYIPMYRIKVEEIARVWGKDPESISNGLPVEEKAVPGLDEDTATIGVEAARNALKRAKIDPKDIGAVYVGSE 80 (345)
T ss_pred CccEEEEEEeCCCeeecHHHHHHHhCCCHhHeeeccceeeeecCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEec
Confidence 47999999999999999999999999999999889999999999999999999999
Q ss_pred ----------------cCcchh--hHHH-HHHHHhHHHHHHHHhCccccCCCcceeeecCCcceEEEec-cccccccccc
Q psy11265 549 ----------------LSIQCY--LGAL-DACYQGYRAKAAKLTGKELSLGDFDAVLFHTPYCKLVQKS-LARLAYNDFI 608 (945)
Q Consensus 549 ----------------Lsl~~~--~~~l-daCy~~~~~~~al~~a~~~~l~~~~~v~~~~p~~kLV~as-~ary~~~~~~ 608 (945)
|++.+. ...+ .+|.++.. ++..|. .++..+.-.+.||+.+ ......+|
T Consensus 81 ~~~~~~p~~a~~v~~~LGl~~~~~~~dv~~aC~g~~~---al~~A~-------~~i~sg~~~~vLVv~~d~~~~~~~~-- 148 (345)
T TIGR00748 81 SHPYAVKPTATIVAEAIGATPDLTAADLEFACKAGTA---GIQACM-------GLVASGMIKYGLAIGADTAQGAPGD-- 148 (345)
T ss_pred CCCccccchHHHHHHHcCCCCCceEEEHHHhHHHHHH---HHHHHH-------HHHHcCCCCEEEEEEEeecccCCCc--
Confidence 554322 2222 58988774 666665 5666654445687776 65556666
Q ss_pred cccCcccccchhhhH-----hhhcccC-ccccccccccccccccccccccccccch-hchHHhhhhhhHHHhhhhccccc
Q psy11265 609 SATDRSQYEGAEAFA-----HIKNLED-TYFNRDIEQYFMSHNLYRTRLAYNDFIS-ATDRTEYEGAEAFAHIKNLEDTY 681 (945)
Q Consensus 609 ~~~E~tqgaGAvA~l-----~i~~~~~-~~~s~d~~Df~Rp~~~~~~~~~~g~~s~-~~y~~~~~~~~a~~~~~~~~~~~ 681 (945)
..+.+.|+||+|++ .+..+.. ..+..|..||||+... ..+...+.+.. ..|.+.+. .+++.+ ++...
T Consensus 149 -~~~~~~GDGAaA~vl~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~--L~~~g 222 (345)
T TIGR00748 149 -ALEYTAGAGGAAYIIGEKNTVAYFEGTYSYTTDTPDFWRREGE-PYPRHGGRFTGEPAYFHHVV--TAAKGL--MEKLG 222 (345)
T ss_pred -cCcccCCCceEEEEEccCCcceEeecccceecccccccccCCC-cCCCcCCeecChHHHHHHHH--HHHHHH--HHHcC
Confidence 56788899999987 2333433 4466778899987211 12222222222 12333222 233333 22223
Q ss_pred CCcchHHHHHHhCCCccchHHHHHHhhhccccccchhhHHHhhhcchHHHHhhhchhhhhccccCcccchhHHHHHHHHh
Q psy11265 682 FNRDIEQYFMSHNRTEYEGAEAFAHIKNLEDTYFNRDIEQYFMSHSKQSFERLTKPGLYLANLIGNMYTPSLYGCLVSLL 761 (945)
Q Consensus 682 ~~~~~~~~~~~H~p~~~m~~~a~~~l~~~e~~~~~~~~~~~~~~~~~~~~~~kv~psl~~~~~vGN~YTaSlyl~L~SlL 761 (945)
...+..|+|++|+|..+|.....+.+ .++ ..|+..++. .+++||+++||++++|.+++
T Consensus 223 l~~~did~~i~Hq~~~~~~~~~~~~l-----------------gl~----~ek~~~~~~-~~~~GNt~sAsipl~L~~~~ 280 (345)
T TIGR00748 223 LTPEDFDYAVFHQPNGKFYLVAARML-----------------GFP----KEQVKPGLL-TPRIGNTYSGATPVGLSAVL 280 (345)
T ss_pred CCHHHcCEEEeCCCChHHHHHHHHHc-----------------CCC----HHHeecccc-ccccCchhhhHHHHHHHHHH
Confidence 44456688999999988876654443 122 134444332 37999999999999999999
Q ss_pred ccCCccccCCCcEEEEEecCCCcccccccccccc---ccc-ccchhhhhhh-hhhhccccc
Q psy11265 762 IQTPWERLQGMSRIGLFSYGSDNIKALFRRGKAH---MNV-WNCEEAGADL-KRVAALDST 817 (945)
Q Consensus 762 ~~~~~~~L~G~~rI~l~s~GsG~~~~~~~~~~~~---~~~-~~~~~a~~~l-~r~~idds~ 817 (945)
+... +| ++|+|++||+|.....+..+..+ ... |+.+ ....| +|..+++++
T Consensus 281 ~~~~----~G-d~vll~~~G~G~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 335 (345)
T TIGR00748 281 DIAE----PG-DRILAVSYGSGAGSDAFSIVVQDAIEEKRDLAPK-VADYIKRKKYIDYAL 335 (345)
T ss_pred HhcC----CC-CEEEEEEecCCcceeEEEEEEchhHHHHhhhhhh-HHHHHhcCccCCHHH
Confidence 7432 89 99999999999999998887643 222 2222 13344 777777766
No 22
>TIGR03516 ppisom_GldI peptidyl-prolyl isomerase, gliding motility-associated. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldI is a FKBP-type peptidyl-prolyl cis-trans isomerase (pfam00254) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockout of this gene abolishes the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. This family is only found in Bacteroidetes containing the suite of genes proposed to confer the gliding motility phenotype.
Probab=99.73 E-value=2e-17 Score=169.56 Aligned_cols=96 Identities=16% Similarity=0.209 Sum_probs=85.5
Q ss_pred CcccCCCCCCEEEEEEEEEEecCCCcEEecCCCCCcCeEEEccccchhhhHHHHHhcCCCCcEEEEEecCCccccCCccc
Q psy11265 284 DLEDINSICLTVHFHFVTQLCDSDNTILDDSRKLGKPMQLVLGKKFKLEVWETLVKHMSIGEISKFVCDKSLVSAYPFVS 363 (945)
Q Consensus 284 ~~~~~P~~g~~V~VhY~g~l~~~dGtvfDsS~~~g~P~~f~lG~g~vI~G~e~~v~~M~~GE~a~~~i~pe~~~aYG~~~ 363 (945)
|.+..|..|+.|++||++++ .||++||||+. ..|++|++|.+++|+||+++|..|++||+++|++||++ |||..
T Consensus 81 g~g~~p~~gd~V~v~Y~~~~--~dG~v~~ss~~-~~P~~f~vg~~~vi~Gl~e~L~~Mk~Ge~~~~~iP~~~--AYG~~- 154 (177)
T TIGR03516 81 GEGTTPEFGDLVTFEYDIRA--LDGDVIYSEEE-LGPQTYKVDQQDLFSGLRDGLKLMKEGETATFLFPSHK--AYGYY- 154 (177)
T ss_pred CCCCcCCCCCEEEEEEEEEe--CCCCEEEeCCC-CCCEEEEeCCcchhHHHHHHHcCCCCCCEEEEEECHHH--cCCCC-
Confidence 34568999999999999999 59999999986 46999999999999999999999999999999999999 99983
Q ss_pred hhhHhhhcccCCCCcccccccccccccccccccccccCCCCcEEEEEEEEeee
Q psy11265 364 KTLRDAAKHSADGTEQSKRHCCGVQMHTGYEDLNELLKKSQDLTFTIELLQVE 416 (945)
Q Consensus 364 ~~lr~i~~~g~~G~~~~~~~~~G~~m~~G~~~~~~~ipp~s~L~FeVELl~v~ 416 (945)
|.. ..||||++|+|+|||++|.
T Consensus 155 ------------g~~-------------------~~Ippns~L~f~IeL~~i~ 176 (177)
T TIGR03516 155 ------------GDQ-------------------NKIGPNLPIISTVTLLNIK 176 (177)
T ss_pred ------------CCC-------------------CCcCcCCcEEEEEEEEEec
Confidence 211 2499999999999999985
No 23
>PRK11570 peptidyl-prolyl cis-trans isomerase; Provisional
Probab=99.72 E-value=3.4e-17 Score=171.72 Aligned_cols=107 Identities=22% Similarity=0.317 Sum_probs=91.0
Q ss_pred ccCCCeEEEccCccccccccCcccCCCCCCEEEEEEEEEEecCCCcEEecCCCCCcCeEEEccccchhhhHHHHHhcCCC
Q psy11265 264 QVSAGKYTIGLGQAKMGFCSDLEDINSICLTVHFHFVTQLCDSDNTILDDSRKLGKPMQLVLGKKFKLEVWETLVKHMSI 343 (945)
Q Consensus 264 ~~~~gk~~~~~g~~~~~~~~~~~~~P~~g~~V~VhY~g~l~~~dGtvfDsS~~~g~P~~f~lG~g~vI~G~e~~v~~M~~ 343 (945)
.+++|.++..+ ..|.|+.|..++.|+|||+|++ .||++||||+.+++|++|.+| .+|+||+++|.+|++
T Consensus 99 ~t~sGl~y~vi-------~~G~G~~p~~~d~V~v~Y~g~l--~dG~vfdss~~~g~P~~f~l~--~vipG~~eaL~~M~~ 167 (206)
T PRK11570 99 STESGLQFRVL-------TQGEGAIPARTDRVRVHYTGKL--IDGTVFDSSVARGEPAEFPVN--GVIPGWIEALTLMPV 167 (206)
T ss_pred ECCCCcEEEEE-------eCCCCCCCCCCCEEEEEEEEEE--CCCCEEEeccCCCCCeEEEee--chhhHHHHHHcCCCC
Confidence 34566554443 3345678999999999999999 599999999999999999996 699999999999999
Q ss_pred CcEEEEEecCCccccCCccchhhHhhhcccCCCCcccccccccccccccccccccccCCCCcEEEEEEEEee
Q psy11265 344 GEISKFVCDKSLVSAYPFVSKTLRDAAKHSADGTEQSKRHCCGVQMHTGYEDLNELLKKSQDLTFTIELLQV 415 (945)
Q Consensus 344 GE~a~~~i~pe~~~aYG~~~~~lr~i~~~g~~G~~~~~~~~~G~~m~~G~~~~~~~ipp~s~L~FeVELl~v 415 (945)
|++++|+|||++ |||. .|.+ ..||||++|+|+|||++|
T Consensus 168 G~k~~~~IP~~l--AYG~-------------~g~~-------------------~~Ipp~s~Lif~veLl~i 205 (206)
T PRK11570 168 GSKWELTIPHEL--AYGE-------------RGAG-------------------ASIPPFSTLVFEVELLEI 205 (206)
T ss_pred CCEEEEEECHHH--cCCC-------------CCCC-------------------CCcCCCCeEEEEEEEEEE
Confidence 999999999999 9997 2221 249999999999999987
No 24
>KOG0552|consensus
Probab=99.72 E-value=1.9e-17 Score=173.19 Aligned_cols=97 Identities=22% Similarity=0.370 Sum_probs=86.6
Q ss_pred ccCcccCCCCCCEEEEEEEEEEecCCCcEEecCCCCCcCeE-EEccccchhhhHHHHHhcCCCCcEEEEEecCCccccCC
Q psy11265 282 CSDLEDINSICLTVHFHFVTQLCDSDNTILDDSRKLGKPMQ-LVLGKKFKLEVWETLVKHMSIGEISKFVCDKSLVSAYP 360 (945)
Q Consensus 282 ~~~~~~~P~~g~~V~VhY~g~l~~~dGtvfDsS~~~g~P~~-f~lG~g~vI~G~e~~v~~M~~GE~a~~~i~pe~~~aYG 360 (945)
+-|.|+.|..|.+|.|||.|+|. .+|.+||++.. ++|+. |++|.++||+|||.+|.+|++|.+++++|||++ |||
T Consensus 128 ~vG~G~~a~~G~rV~v~Y~Gkl~-~~GkvFd~~~~-~kp~~~f~lg~g~VIkG~d~gv~GMkvGGkRrviIPp~l--gYg 203 (226)
T KOG0552|consen 128 RVGSGPSAKKGKRVSVRYIGKLK-GNGKVFDSNFG-GKPFKLFRLGSGEVIKGWDVGVEGMKVGGKRRVIIPPEL--GYG 203 (226)
T ss_pred EecCCCCCCCCCEEEEEEEEEec-CCCeEeecccC-CCCccccccCCCCCCchHHHhhhhhccCCeeEEEeCccc--ccc
Confidence 33557899999999999999994 39999999975 78999 999999999999999999999999999999999 999
Q ss_pred ccchhhHhhhcccCCCCcccccccccccccccccccccccCCCCcEEEEEEEEee
Q psy11265 361 FVSKTLRDAAKHSADGTEQSKRHCCGVQMHTGYEDLNELLKKSQDLTFTIELLQV 415 (945)
Q Consensus 361 ~~~~~lr~i~~~g~~G~~~~~~~~~G~~m~~G~~~~~~~ipp~s~L~FeVELl~v 415 (945)
. .|. +-||||++|+|+|||+.|
T Consensus 204 ~-------------~g~--------------------~~IppnstL~fdVEL~~v 225 (226)
T KOG0552|consen 204 K-------------KGV--------------------PEIPPNSTLVFDVELLSV 225 (226)
T ss_pred c-------------cCc--------------------CcCCCCCcEEEEEEEEec
Confidence 7 222 139999999999999986
No 25
>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5.2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....
Probab=99.68 E-value=2e-16 Score=145.27 Aligned_cols=91 Identities=30% Similarity=0.414 Sum_probs=82.2
Q ss_pred CCCCCCEEEEEEEEEEecCCCcEEecCCCCCcCeEEEccccchhhhHHHHHhcCCCCcEEEEEecCCccccCCccchhhH
Q psy11265 288 INSICLTVHFHFVTQLCDSDNTILDDSRKLGKPMQLVLGKKFKLEVWETLVKHMSIGEISKFVCDKSLVSAYPFVSKTLR 367 (945)
Q Consensus 288 ~P~~g~~V~VhY~g~l~~~dGtvfDsS~~~g~P~~f~lG~g~vI~G~e~~v~~M~~GE~a~~~i~pe~~~aYG~~~~~lr 367 (945)
+|+.|++|+|||++++ .+|++|++|+.+++|++|.+|.+++|+||+++|.+|++||+++|.|||++ +||..
T Consensus 4 ~~~~gd~V~i~y~~~~--~~g~~~~~~~~~~~~~~~~~g~~~~i~g~e~al~~m~~Ge~~~~~vp~~~--ayg~~----- 74 (94)
T PF00254_consen 4 TPKEGDTVTIHYTGRL--EDGKVFDSSYQEGEPFEFRLGSGQVIPGLEEALIGMKVGEKREFYVPPEL--AYGEK----- 74 (94)
T ss_dssp SBSTTSEEEEEEEEEE--TTSEEEEETTTTTSEEEEETTSSSSSHHHHHHHTTSBTTEEEEEEEEGGG--TTTTT-----
T ss_pred cCCCCCEEEEEEEEEE--CCCcEEEEeeecCcceeeeeccCccccchhhhcccccCCCEeeeEeCChh--hcCcc-----
Confidence 5899999999999999 59999999988889999999999999999999999999999999999999 99972
Q ss_pred hhhcccCCCCcccccccccccccccccccccccCCCCcEEEEEEEE
Q psy11265 368 DAAKHSADGTEQSKRHCCGVQMHTGYEDLNELLKKSQDLTFTIELL 413 (945)
Q Consensus 368 ~i~~~g~~G~~~~~~~~~G~~m~~G~~~~~~~ipp~s~L~FeVELl 413 (945)
|.. ...|||+++|+|+||||
T Consensus 75 --------~~~------------------~~~ip~~~~l~f~Iell 94 (94)
T PF00254_consen 75 --------GLE------------------PPKIPPNSTLVFEIELL 94 (94)
T ss_dssp --------TBC------------------TTTBTTTSEEEEEEEEE
T ss_pred --------ccC------------------CCCcCCCCeEEEEEEEC
Confidence 210 02399999999999997
No 26
>PRK15095 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional
Probab=99.60 E-value=4.7e-15 Score=149.36 Aligned_cols=124 Identities=21% Similarity=0.269 Sum_probs=91.1
Q ss_pred CCCCCCEEEEEEEEEEecCCCcEEecCCCCCcCeEEEccccchhhhHHHHHhcCCCCcEEEEEecCCccccCCccchhhH
Q psy11265 288 INSICLTVHFHFVTQLCDSDNTILDDSRKLGKPMQLVLGKKFKLEVWETLVKHMSIGEISKFVCDKSLVSAYPFVSKTLR 367 (945)
Q Consensus 288 ~P~~g~~V~VhY~g~l~~~dGtvfDsS~~~g~P~~f~lG~g~vI~G~e~~v~~M~~GE~a~~~i~pe~~~aYG~~~~~lr 367 (945)
.++.|++|++||++++ .||++||||+.+++|+.|.+|.|++|+|||++|.+|++||++.|+|||++ |||..++.+.
T Consensus 4 ~i~~~~~V~v~Y~~~~--~dG~v~dst~~~~~P~~f~~G~g~vi~gle~aL~gm~~Ge~~~v~ipp~~--ayG~~d~~~v 79 (156)
T PRK15095 4 SVQSNSAVLVHFTLKL--DDGSTAESTRNNGKPALFRLGDGSLSEGLEQQLLGLKVGDKKTFSLEPEA--AFGVPSPDLI 79 (156)
T ss_pred ccCCCCEEEEEEEEEe--CCCCEEEECCCCCCCEEEEeCCCCccHHHHHHHcCCCCCCEEEEEEChHH--hcCCCChHHE
Confidence 3567899999999999 69999999998889999999999999999999999999999999999999 9999877653
Q ss_pred hhhcccCCCCcccccccccccc--c--ccc-----------cc--cccccC-CCCcEEEEEEEEeeeC
Q psy11265 368 DAAKHSADGTEQSKRHCCGVQM--H--TGY-----------ED--LNELLK-KSQDLTFTIELLQVES 417 (945)
Q Consensus 368 ~i~~~g~~G~~~~~~~~~G~~m--~--~G~-----------~~--~~~~ip-p~s~L~FeVELl~v~~ 417 (945)
+..+.. -.+.......|+.+ . .|. .. ++.+-| +|.+|.|+|||+++.+
T Consensus 80 ~~vp~~--~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~i~~~~v~vD~NHPLAGk~L~f~v~i~~v~~ 145 (156)
T PRK15095 80 QYFSRR--DFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDP 145 (156)
T ss_pred EEecHH--HCCcccCCCCCCEEEEECCCCCEEEEEEEEEcCCEEEEECCCcCCCCEEEEEEEEEEecc
Confidence 222110 00000001122211 1 111 10 122234 8999999999999976
No 27
>PRK10902 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional
Probab=99.60 E-value=6.1e-15 Score=160.26 Aligned_cols=109 Identities=24% Similarity=0.282 Sum_probs=92.7
Q ss_pred ccCCCeEEEccCccccccccCcccCCCCCCEEEEEEEEEEecCCCcEEecCCCCCcCeEEEccccchhhhHHHHHhcCCC
Q psy11265 264 QVSAGKYTIGLGQAKMGFCSDLEDINSICLTVHFHFVTQLCDSDNTILDDSRKLGKPMQLVLGKKFKLEVWETLVKHMSI 343 (945)
Q Consensus 264 ~~~~gk~~~~~g~~~~~~~~~~~~~P~~g~~V~VhY~g~l~~~dGtvfDsS~~~g~P~~f~lG~g~vI~G~e~~v~~M~~ 343 (945)
.+++|.++..+. .|.|+.|..|+.|+|||+|++ .||++||+|+.++.|++|.+| ++|+||+++|.+|++
T Consensus 143 ~t~sGl~y~Vi~-------~G~G~~p~~gD~V~V~Y~g~l--~dG~vfdss~~~g~p~~f~l~--~vipG~~EaL~~Mk~ 211 (269)
T PRK10902 143 TTSTGLLYKVEK-------EGTGEAPKDSDTVVVNYKGTL--IDGKEFDNSYTRGEPLSFRLD--GVIPGWTEGLKNIKK 211 (269)
T ss_pred ECCCccEEEEEe-------CCCCCCCCCCCEEEEEEEEEe--CCCCEeeccccCCCceEEecC--CcchHHHHHHhcCCC
Confidence 346676665543 344678999999999999999 599999999999999999996 699999999999999
Q ss_pred CcEEEEEecCCccccCCccchhhHhhhcccCCCCcccccccccccccccccccccccCCCCcEEEEEEEEeeeCC
Q psy11265 344 GEISKFVCDKSLVSAYPFVSKTLRDAAKHSADGTEQSKRHCCGVQMHTGYEDLNELLKKSQDLTFTIELLQVESP 418 (945)
Q Consensus 344 GE~a~~~i~pe~~~aYG~~~~~lr~i~~~g~~G~~~~~~~~~G~~m~~G~~~~~~~ipp~s~L~FeVELl~v~~p 418 (945)
|++++|+|||++ +||. +|. ..||||++|+|+|||++|..+
T Consensus 212 Gek~~l~IP~~l--aYG~-------------~g~--------------------~gIppns~LvfeVeLl~V~~~ 251 (269)
T PRK10902 212 GGKIKLVIPPEL--AYGK-------------AGV--------------------PGIPANSTLVFDVELLDVKPA 251 (269)
T ss_pred CcEEEEEECchh--hCCC-------------CCC--------------------CCCCCCCcEEEEEEEEEeccC
Confidence 999999999999 9997 221 128999999999999999763
No 28
>COG1047 SlpA FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones]
Probab=99.51 E-value=6e-14 Score=141.63 Aligned_cols=133 Identities=14% Similarity=0.175 Sum_probs=101.4
Q ss_pred CCCCEEEEEEEEEEecCCCcEEecCCCCCcCeEEEccccchhhhHHHHHhcCCCCcEEEEEecCCccccCCccchhhHhh
Q psy11265 290 SICLTVHFHFVTQLCDSDNTILDDSRKLGKPMQLVLGKKFKLEVWETLVKHMSIGEISKFVCDKSLVSAYPFVSKTLRDA 369 (945)
Q Consensus 290 ~~g~~V~VhY~g~l~~~dGtvfDsS~~~g~P~~f~lG~g~vI~G~e~~v~~M~~GE~a~~~i~pe~~~aYG~~~~~lr~i 369 (945)
.+|+.|++||++++ .||++||+|.....|+.|.+|.|++|+|+|++|.+|.+||+..+.|||+. |||.++++|.+.
T Consensus 4 ~k~~~V~i~Y~~~~--~dg~v~Dtt~e~~~P~~~i~G~g~li~glE~al~g~~~Ge~~~V~IpPE~--AfGe~~~~lvq~ 79 (174)
T COG1047 4 EKGDVVSLHYTLKV--EDGEVVDTTDENYGPLTFIVGAGQLIPGLEEALLGKEVGEEFTVEIPPED--AFGEYDPDLVQR 79 (174)
T ss_pred cCCCEEEEEEEEEe--cCCcEEEcccccCCCeEEEecCCCcchhHHHHHhCCCCCceeEEEeCchH--hcCCCChHHeEE
Confidence 57899999999999 68999999987678999999999999999999999999999999999999 999999988655
Q ss_pred hccc-CCCCccccccccccccccccc-----c-----------cccccC-CCCcEEEEEEEEeeeCCchhhhhhhccCHH
Q psy11265 370 AKHS-ADGTEQSKRHCCGVQMHTGYE-----D-----------LNELLK-KSQDLTFTIELLQVESPEEYEQESWQLTEA 431 (945)
Q Consensus 370 ~~~g-~~G~~~~~~~~~G~~m~~G~~-----~-----------~~~~ip-p~s~L~FeVELl~v~~p~~y~ke~w~ms~e 431 (945)
.+.+ ..+. .....||.+...-+ . ++-+-| +|.+|.|+||++++.. ..+
T Consensus 80 vp~~~F~~~---~~~~vGm~~~~~~~~~~~~~~V~~V~~~~V~VDfNHpLAGktL~feveVv~v~~-----------a~~ 145 (174)
T COG1047 80 VPRDEFQGV---GELEVGMEVEAEGGDGEIPGVVTEVSGDRVTVDFNHPLAGKTLHFEVEVVEVRE-----------ATE 145 (174)
T ss_pred ecHHHhCcC---CCCCCCcEEEEcCCCceeeEEEEEEcCCEEEEeCCCcCCCCeEEEEEEEEEEec-----------ChH
Confidence 4432 1111 01345665431111 1 111123 9999999999999988 455
Q ss_pred Hhhhccchh
Q psy11265 432 EKLASIPKL 440 (945)
Q Consensus 432 Ekl~~a~~~ 440 (945)
|+++..-..
T Consensus 146 eei~~~~~~ 154 (174)
T COG1047 146 EEIAHGHVH 154 (174)
T ss_pred HHHHHHHhh
Confidence 666654444
No 29
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.39 E-value=2.5e-13 Score=151.91 Aligned_cols=250 Identities=14% Similarity=0.103 Sum_probs=154.5
Q ss_pred ccccccceeeccccccchhHhhhhcCcCcccccccccccccccCCCcchhhhhhhc------------------------
Q psy11265 493 NVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLT------------------------ 548 (945)
Q Consensus 493 ~vGI~ai~~Y~P~~~l~~~el~~~~g~d~gKy~~Glgq~~msv~~~~EDivTma~~------------------------ 548 (945)
.|+|.+++.|+|..+++.+++++..+.+++++...+|..++.+++.+|++.+||+.
T Consensus 3 ~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~i~~~~Gi~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~ 82 (326)
T PRK05963 3 SSRIAGFGHAVPDRRVENAEIEAQLGLETGWIERRTGIRCRRWAAPDETLSDLAASAGDMALSDAGIERSDIALTLLATS 82 (326)
T ss_pred ccEEEEEEEECCCCeecHHHHHHHcCCCHHHhhhccCCeEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECC
Confidence 58999999999999999999999999999999999999999999999999999998
Q ss_pred ----------------cCc-chhhHHH-HHHHHhHHHHHHHHhCccccCCCcceeeecCCcceEEEec-c-ccc-ccccc
Q psy11265 549 ----------------LSI-QCYLGAL-DACYQGYRAKAAKLTGKELSLGDFDAVLFHTPYCKLVQKS-L-ARL-AYNDF 607 (945)
Q Consensus 549 ----------------Lsl-~~~~~~l-daCy~~~~~~~al~~a~~~~l~~~~~v~~~~p~~kLV~as-~-ary-~~~~~ 607 (945)
|++ ++..+.+ .+|.+.. .||..|. +++..+ ..+.||+.+ . .+. ...+
T Consensus 83 ~~d~~~p~~a~~v~~~Lg~~~~~~~di~~~C~g~~---~aL~~A~-------~~l~~~-~~~aLVv~~d~~s~~~~~~~- 150 (326)
T PRK05963 83 TPDHLLPPSAPLLAHRLGLQNSGAIDLAGACAGFL---YALVLAD-------GFVRAQ-GKPVLVVAANILSRRINMAE- 150 (326)
T ss_pred CCCCCCCcHHHHHHHHhCCCCCceeeccchhhHHH---HHHHHHH-------HHHHcC-CCeEEEEEechhhccCCccc-
Confidence 444 2222223 4899988 4666666 666654 344677665 3 322 2211
Q ss_pred ccccCcccccchhhhH-hhhc-----ccCccccc--ccccccc-ccc-----cc-c-------ccccccccchhchHHhh
Q psy11265 608 ISATDRSQYEGAEAFA-HIKN-----LEDTYFNR--DIEQYFM-SHN-----LY-R-------TRLAYNDFISATDRTEY 665 (945)
Q Consensus 608 ~~~~E~tqgaGAvA~l-~i~~-----~~~~~~s~--d~~Df~R-p~~-----~~-~-------~~~~~g~~s~~~y~~~~ 665 (945)
.......|+||.|++ .-.. +....+.. +..|+++ |.. .. . ....+|..+...+.+.+
T Consensus 151 -~~~~~lfGDgA~A~ll~~~~~~~~~~l~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (326)
T PRK05963 151 -RASAVLFADAAGAVVLAPSAKANSGVLGSQLISDGSHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMM 229 (326)
T ss_pred -cCceEEEeecceEEEEEecCCCCCceEEEEEEEcCCCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHHHH
Confidence 011223478888876 1100 11111111 2334443 210 00 0 11124444443344333
Q ss_pred hhhhHHHhhhhcccccCCcchHHHHHHhCCCccchHHHHHHhhhccccccchhhHHHhhhcchHHHHhhhchhhhhcccc
Q psy11265 666 EGAEAFAHIKNLEDTYFNRDIEQYFMSHNRTEYEGAEAFAHIKNLEDTYFNRDIEQYFMSHSKQSFERLTKPGLYLANLI 745 (945)
Q Consensus 666 ~~~~a~~~~~~~~~~~~~~~~~~~~~~H~p~~~m~~~a~~~l~~~e~~~~~~~~~~~~~~~~~~~~~~kv~psl~~~~~v 745 (945)
. .++... +.......+..|+|++|++..++.....+.+ .++. +|+...+ ++.
T Consensus 230 ~--~~~~~~--L~~~gl~~~did~~~~h~~~~~~~~~~~~~l-----------------~l~~----~k~~~~l---~~~ 281 (326)
T PRK05963 230 S--GASQNV--LASAAMTPQDIDRFFPHQANARIVDKVCETI-----------------GIPR----AKAASTL---ETY 281 (326)
T ss_pred H--HHHHHH--HHHcCCCHHHCCEEEeCCCCHHHHHHHHHHc-----------------CCCH----HHhhhhH---Hhh
Confidence 2 133333 2222344455678999999977755443333 2222 2222222 799
Q ss_pred CcccchhHHHHHHHHhccCCccccCCCcEEEEEecCCCccc
Q psy11265 746 GNMYTPSLYGCLVSLLIQTPWERLQGMSRIGLFSYGSDNIK 786 (945)
Q Consensus 746 GN~YTaSlyl~L~SlL~~~~~~~L~G~~rI~l~s~GsG~~~ 786 (945)
||++++|++++|..++.+.... +| ++|+++++|.|...
T Consensus 282 Gn~~sas~~~~L~~~~~~~~~~--~G-d~vll~~~G~G~~~ 319 (326)
T PRK05963 282 GNSSAATIPLSLSLANLEQPLR--EG-ERLLFAAAGAGMTG 319 (326)
T ss_pred CcHHHHHHHHHHHHHHHhCCCC--CC-CEEEEEEEehhhhh
Confidence 9999999999998888764322 89 99999999999764
No 30
>PRK04262 hypothetical protein; Provisional
Probab=99.37 E-value=2.4e-12 Score=145.56 Aligned_cols=225 Identities=16% Similarity=0.090 Sum_probs=159.7
Q ss_pred cccceeeeeeecCCccccHHHHHhhcCCCcccchhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhccccccc
Q psy11265 7 ENVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVE 86 (945)
Q Consensus 7 ~~VGI~ai~~y~p~~yvd~~~L~~~~gv~~~Kyt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~ 86 (945)
|+|||.++..|+|...|+.++|++..|.+++++...+|..+..++++.|+...||+.|++++|++.++++++|+.| .++
T Consensus 1 ~~v~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~l-i~~ 79 (347)
T PRK04262 1 MMVGIVGYGAYIPRYRIKVEEIARVWGDDPEAIKRGLGVEEKSVPGPDEDTATIAVEAARNALKRAGIDPKEIGAV-YVG 79 (347)
T ss_pred CceeEEEEEEeCCCEEecHHHHHHHhCcCHHHHhhccCeeeeecCCCCcCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEE
Confidence 6799999999999999999999999999999998899999999999999999999999999999999999999988 787
Q ss_pred CCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 87 SPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 87 Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
|... .+.. ..........|+..+++ ..+++.++|.|++.+ |..|..+|+ + ++.+.+|| ++|
T Consensus 80 s~~~----~~~~-p~~a~~v~~~Lgl~~~~--------~~~dv~~~C~~~~~a-L~~A~~~i~--s--g~~~~aLVv~~e 141 (347)
T PRK04262 80 SESH----PYAV-KPTATIVAEALGATPDL--------TAADLEFACKAGTAA-LQAAMGLVK--S--GMIKYALAIGAD 141 (347)
T ss_pred ecCC----Cccc-ccHHHHHHHHcCCCCCc--------eEEEHHHhHHHHHHH-HHHHHHHHH--c--CCCCEEEEEEEe
Confidence 7610 1111 11111222445544334 457889999999999 888888886 3 35788998 999
Q ss_pred cccccccCCCCCCC-----cceeec------cccccccccccCcccCCCCCCcc----ccCc-chhHHHHHHHHHHHHhh
Q psy11265 166 SDVQDRLDARRPVP-----PAEFTR------ILAAKKENLHKYPFRSETPPGEY----LFDG-SYYLESIDDFHRRHYKK 229 (945)
Q Consensus 166 ia~y~~~~~~~~t~-----P~~~~~------~~~~~~~~~~~~Df~rP~~~~~~----~vdG-~~YL~~ld~~~~~y~~r 229 (945)
...+...+..+.+. -.++.. ......++.+..|+|++.+...+ .+.+ ..|++.+.++++++-++
T Consensus 142 ~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~~i~~~~~~~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~ 221 (347)
T PRK04262 142 TAQGAPGDALEYTAAAGGAAFIIGKEEVIAEIEATYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFKHIISAAKGLMEK 221 (347)
T ss_pred eeccCCCCCCCCcCCCCcEEEEEecCcccceeeccccccccchhhcCCCCCcCCCcCceecchHHHHHHHHHHHHHHHHH
Confidence 86443322211111 001111 11111134566789986543221 2333 37888899999998888
Q ss_pred hccCCCCCCccccceee-eecCCCcccccc
Q psy11265 230 YEAGTAWPENVGILGIE-FYFPSQYVDQTE 258 (945)
Q Consensus 230 ~~~~~~~~~~~gi~a~e-i~fh~p~v~m~e 258 (945)
.+- ..++++ +++|.+..+|.+
T Consensus 222 ~gl--------~~~dId~~v~Hq~n~~~~~ 243 (347)
T PRK04262 222 LGL--------KPSDYDYAVFHQPNGKFPL 243 (347)
T ss_pred hCc--------CHHHhceeecCCCchHHHH
Confidence 643 345677 889988877755
No 31
>PRK10737 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional
Probab=99.36 E-value=3e-12 Score=132.84 Aligned_cols=122 Identities=16% Similarity=0.241 Sum_probs=90.9
Q ss_pred CCCCEEEEEEEEEEecCCCcEEecCCCCCcCeEEEccccchhhhHHHHHhcCCCCcEEEEEecCCccccCCccchhhHhh
Q psy11265 290 SICLTVHFHFVTQLCDSDNTILDDSRKLGKPMQLVLGKKFKLEVWETLVKHMSIGEISKFVCDKSLVSAYPFVSKTLRDA 369 (945)
Q Consensus 290 ~~g~~V~VhY~g~l~~~dGtvfDsS~~~g~P~~f~lG~g~vI~G~e~~v~~M~~GE~a~~~i~pe~~~aYG~~~~~lr~i 369 (945)
++++.|++||+.++ +||++||+|+. .+|++|.+|.+++|||||++|.+|++|++..|+|+|+. |||.+++.+.+.
T Consensus 4 ~~~~vV~l~Y~l~~--~dG~v~dst~~-~~Pl~~~~G~g~lipglE~aL~G~~~Gd~~~v~l~pee--AyGe~d~~lV~~ 78 (196)
T PRK10737 4 AKDLVVSLAYQVRT--EDGVLVDESPV-SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGAND--AYGQYDENLVQR 78 (196)
T ss_pred CCCCEEEEEEEEEe--CCCCEEEecCC-CCCeEEEeCCCcchHHHHHHHcCCCCCCEEEEEEChHH--hcCCCChHHEEE
Confidence 56899999999999 69999999975 68999999999999999999999999999999999999 999998876443
Q ss_pred hcccCCCCccccccccccccc----cc----------ccc--cccccC-CCCcEEEEEEEEeeeCC
Q psy11265 370 AKHSADGTEQSKRHCCGVQMH----TG----------YED--LNELLK-KSQDLTFTIELLQVESP 418 (945)
Q Consensus 370 ~~~g~~G~~~~~~~~~G~~m~----~G----------~~~--~~~~ip-p~s~L~FeVELl~v~~p 418 (945)
.+.. -.+.......||.+. .| ... ++.+-| ++.+|.|+|+|++++++
T Consensus 79 vpr~--~F~~~~~l~~G~~~~~~~~~G~~~~~V~ev~~d~V~vD~NHPLAG~~L~F~veV~~vr~a 142 (196)
T PRK10737 79 VPKD--VFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVEVVAIREA 142 (196)
T ss_pred ecHH--HCCCccCCCCCCEEEEeCCCCcEEEEEEEEcCCEEEEECCCcCCCCEEEEEEEEEEeccC
Confidence 3321 000001123444321 11 000 111233 89999999999999773
No 32
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=99.35 E-value=4.8e-12 Score=143.21 Aligned_cols=224 Identities=14% Similarity=0.043 Sum_probs=155.7
Q ss_pred ccceeeeeeecCCccccHHHHHhhcCCCcccchhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhcccccccC
Q psy11265 8 NVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVES 87 (945)
Q Consensus 8 ~VGI~ai~~y~p~~yvd~~~L~~~~gv~~~Kyt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~T 87 (945)
.|||.++..|+|...|+-++|++..|.+++++..++|..+..++++.|+..+||+.|++++|++.+++|++|+.| .++|
T Consensus 1 ~~~I~g~g~~lP~~~v~n~~l~~~~~~~~~~i~~~~Gi~~r~v~~~~~~~~~la~~Aa~~aL~~agl~~~dID~l-i~~s 79 (345)
T TIGR00748 1 MAGIVGYGAYIPMYRIKVEEIARVWGKDPESISNGLPVEEKAVPGLDEDTATIGVEAARNALKRAKIDPKDIGAV-YVGS 79 (345)
T ss_pred CccEEEEEEeCCCeeecHHHHHHHhCCCHhHeeeccceeeeecCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEe
Confidence 379999999999999999999999999999998899999999999999999999999999999999999999988 7887
Q ss_pred CcccccccccccchhhhhhcccccccCccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 88 PEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 88 e~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
... .+. ...........|+...++ ..+++.++|.|++.| |..|..+|+ + +..+.+|| ++|.
T Consensus 80 ~~~----~~~-~p~~a~~v~~~LGl~~~~--------~~~dv~~aC~g~~~a-l~~A~~~i~--s--g~~~~vLVv~~d~ 141 (345)
T TIGR00748 80 ESH----PYA-VKPTATIVAEAIGATPDL--------TAADLEFACKAGTAG-IQACMGLVA--S--GMIKYGLAIGADT 141 (345)
T ss_pred cCC----Ccc-ccchHHHHHHHcCCCCCc--------eEEEHHHhHHHHHHH-HHHHHHHHH--c--CCCCEEEEEEEee
Confidence 611 011 111112222445543334 467899999999999 999999996 3 34578898 9987
Q ss_pred ccccccCCCCCCC-----cceee------ccccccccccccCcccCCCCCCccc----cCc-chhHHHHHHHHHHHHhhh
Q psy11265 167 DVQDRLDARRPVP-----PAEFT------RILAAKKENLHKYPFRSETPPGEYL----FDG-SYYLESIDDFHRRHYKKY 230 (945)
Q Consensus 167 a~y~~~~~~~~t~-----P~~~~------~~~~~~~~~~~~~Df~rP~~~~~~~----vdG-~~YL~~ld~~~~~y~~r~ 230 (945)
......+....+. -.+++ ...+...+..+..||||+.....+. +.+ ..|.+.+-.+.++.-++.
T Consensus 142 ~~~~~~~~~~~~~GDGAaA~vl~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 221 (345)
T TIGR00748 142 AQGAPGDALEYTAGAGGAAYIIGEKNTVAYFEGTYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKL 221 (345)
T ss_pred cccCCCccCcccCCCceEEEEEccCCcceEeecccceecccccccccCCCcCCCcCCeecChHHHHHHHHHHHHHHHHHc
Confidence 6433322222111 00111 1111111334445888875443221 222 357777777787777775
Q ss_pred ccCCCCCCccccceee-eecCCCcccccc
Q psy11265 231 EAGTAWPENVGILGIE-FYFPSQYVDQTE 258 (945)
Q Consensus 231 ~~~~~~~~~~gi~a~e-i~fh~p~v~m~e 258 (945)
+- ..++++ +++|.+..+|.+
T Consensus 222 gl--------~~~did~~i~Hq~~~~~~~ 242 (345)
T TIGR00748 222 GL--------TPEDFDYAVFHQPNGKFYL 242 (345)
T ss_pred CC--------CHHHcCEEEeCCCChHHHH
Confidence 42 345677 889988887765
No 33
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=99.32 E-value=1.3e-12 Score=145.48 Aligned_cols=251 Identities=16% Similarity=0.079 Sum_probs=149.0
Q ss_pred cccccccceeeccccccchhHhhhhcCcCcccccccccccccccCCCcchhhhhhhc-----------------------
Q psy11265 492 ENVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLT----------------------- 548 (945)
Q Consensus 492 ~~vGI~ai~~Y~P~~~l~~~el~~~~g~d~gKy~~Glgq~~msv~~~~EDivTma~~----------------------- 548 (945)
|.++|.+++.|+|+.+++++++++..+.+..++....|..++.++...|+...||+.
T Consensus 1 ~~~~I~~i~~~~P~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~Id~~i~~~ 80 (318)
T TIGR00747 1 MYAGILGTGSYLPEKVLTNADLEKMVDTSDEWIVTRTGIKERRIAADDETSSTMGFEAAKRAIENAGISKDDIDLIIVAT 80 (318)
T ss_pred CCCEEEEEEEECCCceecHHHHHHhcCCchHHeecccCceEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEC
Confidence 468999999999999999999999887766656566788889999999999999998
Q ss_pred -----------------cCcch-hhHHH-HHHHHhHHHHHHHHhCccccCCCcceeeecCCcceEEEec-c-ccc-cccc
Q psy11265 549 -----------------LSIQC-YLGAL-DACYQGYRAKAAKLTGKELSLGDFDAVLFHTPYCKLVQKS-L-ARL-AYND 606 (945)
Q Consensus 549 -----------------Lsl~~-~~~~l-daCy~~~~~~~al~~a~~~~l~~~~~v~~~~p~~kLV~as-~-ary-~~~~ 606 (945)
|++.. ....+ .+|.++.. +++.|. +++..+.....||+.+ . ... .+.+
T Consensus 81 ~~~~~~~~~~a~~l~~~lGl~~~~~~~v~~~C~s~~~---al~~A~-------~~i~~g~~~~~Lvv~~e~~~~~~~~~~ 150 (318)
T TIGR00747 81 TTPDHAFPSAACMVQAYLGIKGIPAFDLSAACAGFIY---ALSVAK-------QYIESGKYKTVLVVGAEKLSSTLDWTD 150 (318)
T ss_pred CCCCCCCChHHHHHHHHhCCCCCcEeehhhhhHHHHH---HHHHHH-------HHHHcCCCCEEEEEEehhhcCcCCcCC
Confidence 33332 11222 58888774 556555 5565554344577555 3 221 1111
Q ss_pred cccccCcccccchhhhH--------hhhcccC---cccccc--cccccccccccc-ccccccccchhchHHhhhhhhHHH
Q psy11265 607 FISATDRSQYEGAEAFA--------HIKNLED---TYFNRD--IEQYFMSHNLYR-TRLAYNDFISATDRTEYEGAEAFA 672 (945)
Q Consensus 607 ~~~~~E~tqgaGAvA~l--------~i~~~~~---~~~s~d--~~Df~Rp~~~~~-~~~~~g~~s~~~y~~~~~~~~a~~ 672 (945)
.......|+||+|++ .|..... +.++.. +++.+++..... ....++......+.+.+. .+.+
T Consensus 151 --~~~~~~~GDGAaA~lL~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 226 (318)
T TIGR00747 151 --RGTCVLFGDGAGAVVLGESEDPGGIISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMG--DVVE 226 (318)
T ss_pred --CCeEEEEecceeEEEEeecCCCCcEEEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHH--HHHH
Confidence 011234688888877 1222221 111111 112122200011 112233333334444433 2344
Q ss_pred hhhhcccccCCcchHHHHHHhCCCccchHHHHHHhhhccccccchhhHHHhhhcchHHHHhhhchhhhhccccCcccchh
Q psy11265 673 HIKNLEDTYFNRDIEQYFMSHNRTEYEGAEAFAHIKNLEDTYFNRDIEQYFMSHSKQSFERLTKPGLYLANLIGNMYTPS 752 (945)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~H~p~~~m~~~a~~~l~~~e~~~~~~~~~~~~~~~~~~~~~~kv~psl~~~~~vGN~YTaS 752 (945)
++ ++......+..+||++|++..++.....+.+ .++. .|+... + +++||++++|
T Consensus 227 ~~--l~~~g~~~~di~~~~~h~~~~~~~~~~~~~l-----------------gi~~----~k~~~~--~-~~~Gn~~sas 280 (318)
T TIGR00747 227 ET--LEANGLDPEDIDWFVPHQANLRIIEALAKRL-----------------ELDM----SQVVKT--V-HKYGNTSAAS 280 (318)
T ss_pred HH--HHHcCCCHHHCCEEEECCCCHHHHHHHHHHc-----------------CCCH----HHeeeh--H-hhhCCHHHHH
Confidence 33 1222334455578999988866554433332 2222 222222 3 5699999999
Q ss_pred HHHHHHHHhccCCccccCCCcEEEEEecCCCcc
Q psy11265 753 LYGCLVSLLIQTPWERLQGMSRIGLFSYGSDNI 785 (945)
Q Consensus 753 lyl~L~SlL~~~~~~~L~G~~rI~l~s~GsG~~ 785 (945)
++++|.+++++.... +| ++|+++++|+|..
T Consensus 281 ~~~~L~~~~~~~~~~--~G-d~vll~~~G~G~t 310 (318)
T TIGR00747 281 IPLALDELLRTGRIK--PG-DLLLLVAFGGGLT 310 (318)
T ss_pred HHHHHHHHHHcCCCC--CC-CEEEEEEEehhhe
Confidence 999999999875322 89 9999999999965
No 34
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.31 E-value=1.9e-12 Score=145.42 Aligned_cols=256 Identities=14% Similarity=0.114 Sum_probs=158.6
Q ss_pred cccccccceeeccccccchhHhhhh-------cCcCcccccccccccccccCCCcchhhhhhhc----------------
Q psy11265 492 ENVGILGIEFYFPSQYVDQTELEKH-------DQVSAGKYTIGLGQAKMGFCSDLEDINSICLT---------------- 548 (945)
Q Consensus 492 ~~vGI~ai~~Y~P~~~l~~~el~~~-------~g~d~gKy~~Glgq~~msv~~~~EDivTma~~---------------- 548 (945)
.+|+|.+++.|+|..+++++++++. .+.++.++....|.+++.+.+..|+..+||+.
T Consensus 4 ~~v~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~I 83 (338)
T PRK09258 4 SNVAILSLAYELAPVVVTSSEIEERLAPLYERLRLPPGQLEALTGIRERRWWPEGTQLSDGAIAAGRKALAEAGIDPSDI 83 (338)
T ss_pred cceEEEEEEecCCCccCcHHHHHHHhhhcccccCCChhHhhhhcCceeEecCCCCCCHHHHHHHHHHHHHHHcCCCHHHC
Confidence 4689999999999999999999875 24566678778899999999999999999998
Q ss_pred ------------------------cCcc--hhhHHH-HHHHHhHHHHHHHHhCccccCCCcceeeecCCcceEEEec-cc
Q psy11265 549 ------------------------LSIQ--CYLGAL-DACYQGYRAKAAKLTGKELSLGDFDAVLFHTPYCKLVQKS-LA 600 (945)
Q Consensus 549 ------------------------Lsl~--~~~~~l-daCy~~~~~~~al~~a~~~~l~~~~~v~~~~p~~kLV~as-~a 600 (945)
|++. +....+ .+|.++.. |+..|. +++..+.....||+.+ ..
T Consensus 84 d~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~~C~~~~~---al~~A~-------~~i~~g~~~~~Lvv~~e~~ 153 (338)
T PRK09258 84 GLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVSNACLGFLN---GMLDAA-------NMIELGQIDYALVVSGESA 153 (338)
T ss_pred CEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehhhhhHHHHH---HHHHHH-------HHHHcCCCCEEEEEEeccc
Confidence 5553 333334 58999884 666665 6666554445677665 33
Q ss_pred cccc----ccccccc-----------CcccccchhhhH--hhh------cccCcccccccccccccccccc-cccccccc
Q psy11265 601 RLAY----NDFISAT-----------DRSQYEGAEAFA--HIK------NLEDTYFNRDIEQYFMSHNLYR-TRLAYNDF 656 (945)
Q Consensus 601 ry~~----~~~~~~~-----------E~tqgaGAvA~l--~i~------~~~~~~~s~d~~Df~Rp~~~~~-~~~~~g~~ 656 (945)
...+ ..+.... ..+.|+||+|++ .-. .+. +..+....|++......+ ....++..
T Consensus 154 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (338)
T PRK09258 154 REIVEATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHPRGHRLL-GGVTRAATEHHELCQGGRDGMRTDAVG 232 (338)
T ss_pred chhccchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCCCcceee-eeeeecCCCcccccccCccceEEcHHH
Confidence 2211 1111011 235799999987 110 111 112222233433211111 22245555
Q ss_pred chhchHHhhhhhhHHHhhhhcccccCCcchHHHHHHhCCCccchHHHHHHhhhccccccchhhHHHhhhcchHHHHhhhc
Q psy11265 657 ISATDRTEYEGAEAFAHIKNLEDTYFNRDIEQYFMSHNRTEYEGAEAFAHIKNLEDTYFNRDIEQYFMSHSKQSFERLTK 736 (945)
Q Consensus 657 s~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~H~p~~~m~~~a~~~l~~~e~~~~~~~~~~~~~~~~~~~~~~kv~ 736 (945)
....+.+.+. .+++++ ++......+..|||++|++..++.....+.+ .++. .|+-
T Consensus 233 ~~~~~~~~~~--~~~~~~--L~~~g~~~~did~~i~H~~~~~~~~~~~~~l-----------------gl~~----~k~~ 287 (338)
T PRK09258 233 LLKEGVELAV--DTWEAF--LAQLGWAVEQVDRVICHQVGAAHTRAILKAL-----------------GIDP----EKVF 287 (338)
T ss_pred HHHHHHHHHH--HHHHHH--HHHcCCCHHHCCEEecCCCCHHHHHHHHHHh-----------------CCCH----HHce
Confidence 5555655443 255554 1222344455688999987755543222222 2221 2232
Q ss_pred hhhhhccccCcccchhHHHHHHHHhccCCccccCCCcEEEEEecCCCcccccc
Q psy11265 737 PGLYLANLIGNMYTPSLYGCLVSLLIQTPWERLQGMSRIGLFSYGSDNIKALF 789 (945)
Q Consensus 737 psl~~~~~vGN~YTaSlyl~L~SlL~~~~~~~L~G~~rI~l~s~GsG~~~~~~ 789 (945)
.++ .++||++++|+++.|..+++..... +| ++|+++++|+|......
T Consensus 288 ~~~---~~~GN~~sas~~~~L~~~~~~g~~~--~G-d~vll~~~G~G~s~~~~ 334 (338)
T PRK09258 288 TTF---PTLGNMGPASLPITLAMAAEEGFLK--PG-DRVALLGIGSGLNCSML 334 (338)
T ss_pred ehH---hhhCCcHHhHHHHHHHHHHHhCCCC--CC-CEEEEEEechhHhhHhH
Confidence 222 5899999999999999999764322 89 99999999999876554
No 35
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.28 E-value=2.2e-12 Score=143.93 Aligned_cols=252 Identities=15% Similarity=0.064 Sum_probs=147.8
Q ss_pred ccccccccceeeccccccchhHhhhhcCcCcccccccccccccccCCCcchhhhhhhc----------------------
Q psy11265 491 PENVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLT---------------------- 548 (945)
Q Consensus 491 ~~~vGI~ai~~Y~P~~~l~~~el~~~~g~d~gKy~~Glgq~~msv~~~~EDivTma~~---------------------- 548 (945)
+++++|.+++.|+|..+++++|+++..+.+.+++...+|.+++.++.+.|+..+||+.
T Consensus 2 ~~~~~I~~ig~~~P~~~v~~~e~~~~~~~~~~~i~~~~Gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~ 81 (325)
T PRK12879 2 MSYARITGIGTYVPPRVLTNDDLETFIDTSDEWIVQRTGIKERRIAHVEEYTSDLAIKAAERALARAGLDAEDIDLIIVA 81 (325)
T ss_pred CCCCEEEEEEEECCCcEEcHHHHHHhcCCCHHHhhhccCceEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 3579999999999999999999999887766777677899999999999999999998
Q ss_pred ------------------cCcc-hhhHHH-HHHHHhHHHHHHHHhCccccCCCcceeeecCCcceEEEec--ccccc-cc
Q psy11265 549 ------------------LSIQ-CYLGAL-DACYQGYRAKAAKLTGKELSLGDFDAVLFHTPYCKLVQKS--LARLA-YN 605 (945)
Q Consensus 549 ------------------Lsl~-~~~~~l-daCy~~~~~~~al~~a~~~~l~~~~~v~~~~p~~kLV~as--~ary~-~~ 605 (945)
|++. +....+ .+|.++.. |+..|. +++..+.....||+.+ ..++- ..
T Consensus 82 ~~~~~~~~~~~a~~l~~~lg~~~~~~~~v~~~C~~~~~---al~~A~-------~~l~~g~~~~~Lvv~~e~~s~~~~~~ 151 (325)
T PRK12879 82 TTTPDYLFPSTASQVQARLGIPNAAAFDINAACAGFLY---GLETAN-------GLITSGLYKKVLVIGAERLSKVTDYT 151 (325)
T ss_pred cCCCCCCCChHHHHHHHHhCCCCCcEEEECccchHHHH---HHHHHH-------HHHHcCCCCEEEEEEehhhcCcCCcc
Confidence 4433 122222 58888774 666565 5666554444677665 44331 12
Q ss_pred ccccccCcccccchhhhH--h------hhcccCcccc---c--ccccccccccccc-----ccccccccchhchHHhhhh
Q psy11265 606 DFISATDRSQYEGAEAFA--H------IKNLEDTYFN---R--DIEQYFMSHNLYR-----TRLAYNDFISATDRTEYEG 667 (945)
Q Consensus 606 ~~~~~~E~tqgaGAvA~l--~------i~~~~~~~~s---~--d~~Df~Rp~~~~~-----~~~~~g~~s~~~y~~~~~~ 667 (945)
+ +..-...|+||+|+| + +.....++.+ . .+.+++++.+... ....+|. .++..+.+.
T Consensus 152 ~--~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 226 (325)
T PRK12879 152 D--RTTCILFGDGAGAVVLEATENEPGFIDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGR---EVFKWAVRT 226 (325)
T ss_pred c--cCceEEEeecceEEEEEecCCCCCeEEEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCH---HHHHHHHHH
Confidence 1 111234688998877 1 1110000100 0 1223333210000 0011121 111111110
Q ss_pred -hhHHHhhhhcccccCCcchHHHHHHhCCCccchHHHHHHhhhccccccchhhHHHhhhcchHHHHhhhchhhhhccccC
Q psy11265 668 -AEAFAHIKNLEDTYFNRDIEQYFMSHNRTEYEGAEAFAHIKNLEDTYFNRDIEQYFMSHSKQSFERLTKPGLYLANLIG 746 (945)
Q Consensus 668 -~~a~~~~~~~~~~~~~~~~~~~~~~H~p~~~m~~~a~~~l~~~e~~~~~~~~~~~~~~~~~~~~~~kv~psl~~~~~vG 746 (945)
+.+++.+ +.......+..|+|++|++..++.. ++...+ .++. .|+... + +++|
T Consensus 227 ~~~~i~~~--L~~~g~~~~did~~~~h~~~~~~~~-~~~~~l----------------g~~~----~~~~~~--~-~~~G 280 (325)
T PRK12879 227 MPKGARQV--LEKAGLTKDDIDWVIPHQANLRIIE-SLCEKL----------------GIPM----EKTLVS--V-EYYG 280 (325)
T ss_pred HHHHHHHH--HHHcCCCHHHCCEEEECCCCHHHHH-HHHHHc----------------CCCH----HHhhhh--H-hhhC
Confidence 1133333 1222333345578999988866643 222221 1222 122221 2 7999
Q ss_pred cccchhHHHHHHHHhccCCccccCCCcEEEEEecCCCccc
Q psy11265 747 NMYTPSLYGCLVSLLIQTPWERLQGMSRIGLFSYGSDNIK 786 (945)
Q Consensus 747 N~YTaSlyl~L~SlL~~~~~~~L~G~~rI~l~s~GsG~~~ 786 (945)
|++++|+++.|..++++... .+| ++|+++++|+|...
T Consensus 281 n~~sas~~~~L~~~~~~g~~--~~G-d~vll~~~G~G~~~ 317 (325)
T PRK12879 281 NTSAATIPLALDLALEQGKI--KPG-DTLLLYGFGAGLTW 317 (325)
T ss_pred chHHHHHHHHHHHHHHcCCC--CCC-CEEEEEEEchhhhh
Confidence 99999999999999986432 289 99999999999764
No 36
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=99.28 E-value=2.3e-12 Score=143.07 Aligned_cols=251 Identities=17% Similarity=0.101 Sum_probs=154.4
Q ss_pred ccccccceeeccccccchhHhhhhcCcCcccccccccccccccCCCcchhhhhhhc------------------------
Q psy11265 493 NVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLT------------------------ 548 (945)
Q Consensus 493 ~vGI~ai~~Y~P~~~l~~~el~~~~g~d~gKy~~Glgq~~msv~~~~EDivTma~~------------------------ 548 (945)
+++|.+++.|+|..+++++++.+..+.+.+++....|.+++.++.+.|+...||+.
T Consensus 1 ~~~I~~i~~~lP~~~~~~~~~~~~~~~~~~~~~~~~Gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~ 80 (320)
T cd00830 1 NARILGIGSYLPERVVTNDELEKRLDTSDEWIRTRTGIRERRIADPGETTSDLAVEAAKKALEDAGIDADDIDLIIVATS 80 (320)
T ss_pred CCEEEEEEEECCCcEEcHHHHHHHcCCCHHHhhhccCceEEeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 57999999999999999999999888887888888999999999999999999998
Q ss_pred ----------------cCc-chhhHHH-HHHHHhHHHHHHHHhCccccCCCcceeeecCCcceEEEec--ccccc-cccc
Q psy11265 549 ----------------LSI-QCYLGAL-DACYQGYRAKAAKLTGKELSLGDFDAVLFHTPYCKLVQKS--LARLA-YNDF 607 (945)
Q Consensus 549 ----------------Lsl-~~~~~~l-daCy~~~~~~~al~~a~~~~l~~~~~v~~~~p~~kLV~as--~ary~-~~~~ 607 (945)
|++ .+....+ .+|.++.. ++..|. +++..+.....||+.+ +.+.- +.+
T Consensus 81 ~~~~~~~~~~~~l~~~lg~~~~~~~~v~~~C~s~~~---al~~A~-------~~i~~g~~~~vLvv~~e~~s~~~~~~~- 149 (320)
T cd00830 81 TPDYLFPATACLVQARLGAKNAAAFDINAACSGFLY---GLSTAA-------GLIRSGGAKNVLVVGAETLSRILDWTD- 149 (320)
T ss_pred CCCCCCCcHHHHHHHHhCCCCCcEeeccccchHHHH---HHHHHH-------HHHHcCCCCEEEEEEehhhccccCccc-
Confidence 333 2222222 47888774 566565 5566665455677654 43321 121
Q ss_pred ccccCcccccchhhhH--h------hhcccCccc--ccccccccc-----cc---ccc-cccccccccchhchHHhhhhh
Q psy11265 608 ISATDRSQYEGAEAFA--H------IKNLEDTYF--NRDIEQYFM-----SH---NLY-RTRLAYNDFISATDRTEYEGA 668 (945)
Q Consensus 608 ~~~~E~tqgaGAvA~l--~------i~~~~~~~~--s~d~~Df~R-----p~---~~~-~~~~~~g~~s~~~y~~~~~~~ 668 (945)
.......|+||+|++ . |......+. +.|...+.. |. ... .....++......+.+.+.
T Consensus 150 -~~~~~~~GDgAaA~ll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 226 (320)
T cd00830 150 -RSTAVLFGDGAGAVVLEATEEDPGILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMP-- 226 (320)
T ss_pred -CCceEEEeccceEEEEEecCCCCcEEEEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhH--
Confidence 122356799999987 1 222111111 122222221 10 000 0112344444444444433
Q ss_pred hHHHhhhhcccccCCcchHHHHHHhCCCccchHHHHHHhhhccccccchhhHHHhhhcchHHHHhhhchhhhhccccCcc
Q psy11265 669 EAFAHIKNLEDTYFNRDIEQYFMSHNRTEYEGAEAFAHIKNLEDTYFNRDIEQYFMSHSKQSFERLTKPGLYLANLIGNM 748 (945)
Q Consensus 669 ~a~~~~~~~~~~~~~~~~~~~~~~H~p~~~m~~~a~~~l~~~e~~~~~~~~~~~~~~~~~~~~~~kv~psl~~~~~vGN~ 748 (945)
.++..+ +.......+..++|++|++..++-....+.+ .++.+ |+.. .-+++||+
T Consensus 227 ~~i~~~--l~~~g~~~~di~~~~~h~~~~~~~~~~~~~l-----------------gl~~~----~~~~---~~~~~Gn~ 280 (320)
T cd00830 227 ESIEEA--LEKAGLTPDDIDWFVPHQANLRIIEAVAKRL-----------------GLPEE----KVVV---NLDRYGNT 280 (320)
T ss_pred HHHHHH--HHHcCCCHHHCCEEEECCCCHHHHHHHHHHh-----------------CCCHH----Hhhh---hHHhhCcH
Confidence 244444 1122333345578999988866644332322 22222 2211 22689999
Q ss_pred cchhHHHHHHHHhccCCccccCCCcEEEEEecCCCccc
Q psy11265 749 YTPSLYGCLVSLLIQTPWERLQGMSRIGLFSYGSDNIK 786 (945)
Q Consensus 749 YTaSlyl~L~SlL~~~~~~~L~G~~rI~l~s~GsG~~~ 786 (945)
+++|+++.|..++++.... +| ++|+|+++|+|...
T Consensus 281 ~sas~~~~L~~~~~~~~~~--~G-~~vll~~~G~G~~~ 315 (320)
T cd00830 281 SAASIPLALDEAIEEGKLK--KG-DLVLLLGFGAGLTW 315 (320)
T ss_pred HHHHHHHHHHHHHHcCCCC--CC-CEEEEEEEchHHhh
Confidence 9999999999999875422 89 99999999999653
No 37
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.20 E-value=1.4e-11 Score=138.10 Aligned_cols=254 Identities=15% Similarity=0.035 Sum_probs=144.7
Q ss_pred ccccccccceeeccccccchhHhhhhcCcCcccccccccccccccCCCcchhhhhhhc----------------------
Q psy11265 491 PENVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLT---------------------- 548 (945)
Q Consensus 491 ~~~vGI~ai~~Y~P~~~l~~~el~~~~g~d~gKy~~Glgq~~msv~~~~EDivTma~~---------------------- 548 (945)
+.+++|.+++.|+|..+++.+++++..+...+++....|.+++.++. .|+..+||+.
T Consensus 2 ~~~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~-~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~ 80 (329)
T PRK07204 2 KRYISIKGIGTYLPKRKVDSLELDKKLDLPEGWVLKKSGVKTRHFVD-GETSSYMGAEAAKKAVEDAKLTLDDIDCIICA 80 (329)
T ss_pred CCCcEEEEEEEeCCCceecHHHHHHhhCCCHhHhhhccCceEEeecC-CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 45789999999999999999999998888777788889999999999 8999999988
Q ss_pred ------------------cCcc---hhhHHH-HHHHHhHHHHHHHHhCccccCCCcceeeecCCcceEEEec-ccccccc
Q psy11265 549 ------------------LSIQ---CYLGAL-DACYQGYRAKAAKLTGKELSLGDFDAVLFHTPYCKLVQKS-LARLAYN 605 (945)
Q Consensus 549 ------------------Lsl~---~~~~~l-daCy~~~~~~~al~~a~~~~l~~~~~v~~~~p~~kLV~as-~ary~~~ 605 (945)
|++. |....+ .+|.++.. |+..|. .++..+.....||+.+ .....++
T Consensus 81 ~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~~~C~~~~~---al~~a~-------~~l~~g~~~~~Lvv~~e~~s~~~~ 150 (329)
T PRK07204 81 SGTIQQAIPCTASLIQEQLGLQHSGIPCFDINSTCLSFIT---ALDTIS-------YAIECGRYKRVLIISSEISSVGLN 150 (329)
T ss_pred CCCCCCCCccHHHHHHHHhCCCCCCceEEEccchhHHHHH---HHHHHH-------HHHHCCCCCEEEEEEeccccCCCC
Confidence 4443 223333 38988884 555554 5555444445687665 4322221
Q ss_pred ccccccCcccccchhhhH--hh---hcccC-ccccc-ccccc---------------ccccccccccccccccchhchHH
Q psy11265 606 DFISATDRSQYEGAEAFA--HI---KNLED-TYFNR-DIEQY---------------FMSHNLYRTRLAYNDFISATDRT 663 (945)
Q Consensus 606 ~~~~~~E~tqgaGAvA~l--~i---~~~~~-~~~s~-d~~Df---------------~Rp~~~~~~~~~~g~~s~~~y~~ 663 (945)
--....-...|+||+|++ .- ..+.. ...|. +..|+ |.+......-..+|........+
T Consensus 151 ~~~~~~~~lfGDGAaA~ll~~~~~~~~il~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (329)
T PRK07204 151 WGQNESCILFGDGAAAVVITKGDHSSRILASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSK 230 (329)
T ss_pred cccCcceEEEecccEEEEEEEcCCCCcEEEEEEEEecCCCCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHH
Confidence 100011133689999977 10 01110 00000 00111 11100000001112111111111
Q ss_pred hhhhhhHHHhhhhcccccCCcchHHHHHHhCCCccchHHHHHHhhhccccccchhhHHHhhhcchHHHHhhhchhhhhcc
Q psy11265 664 EYEGAEAFAHIKNLEDTYFNRDIEQYFMSHNRTEYEGAEAFAHIKNLEDTYFNRDIEQYFMSHSKQSFERLTKPGLYLAN 743 (945)
Q Consensus 664 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~H~p~~~m~~~a~~~l~~~e~~~~~~~~~~~~~~~~~~~~~~kv~psl~~~~ 743 (945)
.+. .+++.. +.......+..|+|++|++..++.. ++...+ .++. .++. ..-+
T Consensus 231 ~~~--~~i~~~--L~~~gl~~~did~~~~H~~~~~~~~-~i~~~l----------------~l~~----e~~~---~~~~ 282 (329)
T PRK07204 231 YLM--KFIDKL--LMDAGYTLADIDLIVPHQASGPAMR-LIRKKL----------------GVDE----ERFV---TIFE 282 (329)
T ss_pred HHH--HHHHHH--HHHcCCCHHHCCEEEeCCCCHHHHH-HHHHHc----------------CCCH----HHhh---hhHh
Confidence 111 122222 1222333344567999988755532 332221 1222 1221 1227
Q ss_pred ccCcccchhHHHHHHHHhccCCccccCCCcEEEEEecCCCccc
Q psy11265 744 LIGNMYTPSLYGCLVSLLIQTPWERLQGMSRIGLFSYGSDNIK 786 (945)
Q Consensus 744 ~vGN~YTaSlyl~L~SlL~~~~~~~L~G~~rI~l~s~GsG~~~ 786 (945)
+.||++++|+++.|..++++...+ +| ++|+|+++|.|..-
T Consensus 283 ~~Gn~~sas~~~~L~~~~~~g~~~--~G-d~vll~~~G~G~s~ 322 (329)
T PRK07204 283 DHGNMIAASIPVALFEAIKQKKVQ--RG-NKILLLGTSAGLSI 322 (329)
T ss_pred hhCcHHHHHHHHHHHHHHHcCCCC--CC-CEEEEEEEchhhhh
Confidence 999999999999999999875422 89 99999999999653
No 38
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.17 E-value=2.2e-11 Score=135.60 Aligned_cols=251 Identities=16% Similarity=0.055 Sum_probs=145.4
Q ss_pred cccccccceeeccccccchhHhhhhcCcCcccccccccccccccCCCcchhhhhhhc-----------------------
Q psy11265 492 ENVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLT----------------------- 548 (945)
Q Consensus 492 ~~vGI~ai~~Y~P~~~l~~~el~~~~g~d~gKy~~Glgq~~msv~~~~EDivTma~~----------------------- 548 (945)
+.|+|.+++.|+|..+++++++.+..+.+..+.....|..++.++.++++...||+.
T Consensus 2 ~~v~I~ai~~~lP~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~id~vi~~~ 81 (319)
T PRK09352 2 MYAKILGTGSYLPERVVTNDDLEKMVDTSDEWIVTRTGIKERRIAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIVAT 81 (319)
T ss_pred CceEEEEEEEECCCeEEcHHHHHHHcCCCHHHhhhhcCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 579999999999999999999999887655555455677778888899999999998
Q ss_pred -----------------cCcch-hhHHH-HHHHHhHHHHHHHHhCccccCCCcceeeecCCcceEEEec--cccc-cccc
Q psy11265 549 -----------------LSIQC-YLGAL-DACYQGYRAKAAKLTGKELSLGDFDAVLFHTPYCKLVQKS--LARL-AYND 606 (945)
Q Consensus 549 -----------------Lsl~~-~~~~l-daCy~~~~~~~al~~a~~~~l~~~~~v~~~~p~~kLV~as--~ary-~~~~ 606 (945)
+++.. ....+ .+|.++.. |+..|. +++..+.....||..+ +.+. .+.+
T Consensus 82 ~~~~~~~~~~~~~i~~~lG~~~~~~~~v~~~Casg~~---al~~A~-------~~i~~g~~~~vLvv~~e~~s~~~~~~~ 151 (319)
T PRK09352 82 TTPDYAFPSTACLVQARLGAKNAAAFDLSAACSGFVY---ALSTAD-------QFIRSGAYKNVLVIGAEKLSRIVDWTD 151 (319)
T ss_pred CCCCCCCchHHHHHHHHhCCCCCcEeeccccchhHHH---HHHHHH-------HHHHcCCCCEEEEEEehhhccccCccc
Confidence 22211 11111 47887774 555555 5555543344577554 4433 1222
Q ss_pred cccccCcccccchhhhH-------hhhcccCcccccccccccc-cccccccc------ccccccchhchHHhhhhhhHHH
Q psy11265 607 FISATDRSQYEGAEAFA-------HIKNLEDTYFNRDIEQYFM-SHNLYRTR------LAYNDFISATDRTEYEGAEAFA 672 (945)
Q Consensus 607 ~~~~~E~tqgaGAvA~l-------~i~~~~~~~~s~d~~Df~R-p~~~~~~~------~~~g~~s~~~y~~~~~~~~a~~ 672 (945)
...-...|+||+|+| .+...+..+.+. ..|+++ |......+ ..+++.+...+.+.+. .+++
T Consensus 152 --~~~~~~~gDGaaA~ll~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~ 226 (319)
T PRK09352 152 --RSTCVLFGDGAGAVVLGASEEPGILSTHLGSDGS-YGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELA--KVAR 226 (319)
T ss_pred --CCceEEEeccceEEEEEEcCCCCeEEEEEEEcCC-CCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHH--HHHH
Confidence 011124588888877 122222111111 112222 31110111 1234434444444433 2444
Q ss_pred hhhhcccccCCcchHHHHHHhCCCccchHHHHHHhhhccccccchhhHHHhhhcchHHHHhhhchhhhhccccCcccchh
Q psy11265 673 HIKNLEDTYFNRDIEQYFMSHNRTEYEGAEAFAHIKNLEDTYFNRDIEQYFMSHSKQSFERLTKPGLYLANLIGNMYTPS 752 (945)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~H~p~~~m~~~a~~~l~~~e~~~~~~~~~~~~~~~~~~~~~~kv~psl~~~~~vGN~YTaS 752 (945)
+.- .......+..+|++.|++..++-.. +...+ .++.+.+ ... + .++||+++++
T Consensus 227 ~~l--~~~g~~~~di~~~~~h~~~~~~~~~-~~~~l----------------g~~~~~~----~~~--~-~~~Gn~~~a~ 280 (319)
T PRK09352 227 EAL--EAAGLTPEDIDWLVPHQANLRIIDA-TAKKL----------------GLPMEKV----VVT--V-DKYGNTSAAS 280 (319)
T ss_pred HHH--HHcCCCHHHCCEEEECCCCHHHHHH-HHHHh----------------CCCHHHh----hhh--H-HhhCCHHHHH
Confidence 441 1223444455778899776443322 22111 2233222 111 2 5899999999
Q ss_pred HHHHHHHHhccCCccccCCCcEEEEEecCCCccc
Q psy11265 753 LYGCLVSLLIQTPWERLQGMSRIGLFSYGSDNIK 786 (945)
Q Consensus 753 lyl~L~SlL~~~~~~~L~G~~rI~l~s~GsG~~~ 786 (945)
+++.|.++|++.... +| ++|+++++|.|...
T Consensus 281 ~~~~L~~~~~~g~~~--~G-d~vll~s~G~G~~~ 311 (319)
T PRK09352 281 IPLALDEAVRDGRIK--RG-DLVLLEGFGGGLTW 311 (319)
T ss_pred HHHHHHHHHHcCCCC--CC-CEEEEEEEchhhee
Confidence 999999999864322 89 99999999998764
No 39
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=99.12 E-value=9.4e-11 Score=130.47 Aligned_cols=254 Identities=24% Similarity=0.247 Sum_probs=144.1
Q ss_pred ccccccceeeccccccchhHhhhhcCcCcccccccccccccccCCCcchhhhhhhc------------------------
Q psy11265 493 NVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLT------------------------ 548 (945)
Q Consensus 493 ~vGI~ai~~Y~P~~~l~~~el~~~~g~d~gKy~~Glgq~~msv~~~~EDivTma~~------------------------ 548 (945)
.|+|.+++.|+|..+++.+++++..+.+ .+....|..++.+..++++..+|++.
T Consensus 1 ~v~I~~i~~~lP~~~v~~~~~~~~~~~~--~~~~~~gi~~r~~~~~~~~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~ 78 (324)
T cd00827 1 DVGIEAIGAYLPRYRVDNEELAEGLGVD--PGKYTTGIGQRHMAGDDEDVPTMAVEAARRALERAGIDPDDIGLLIVATE 78 (324)
T ss_pred CccEEEEEecCCceeecHHHHHHHhCCC--cceeeeecceeEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 4899999999999999999999988765 34455677777777778999999888
Q ss_pred ----------------cCcc-hhhHHH-HHHHHhHHHHHHHHhCccccCCCcceeeecCCcceEEEec-ccccccccccc
Q psy11265 549 ----------------LSIQ-CYLGAL-DACYQGYRAKAAKLTGKELSLGDFDAVLFHTPYCKLVQKS-LARLAYNDFIS 609 (945)
Q Consensus 549 ----------------Lsl~-~~~~~l-daCy~~~~~~~al~~a~~~~l~~~~~v~~~~p~~kLV~as-~ary~~~~~~~ 609 (945)
|++. +....+ .+|.++.. |+..|. .++..+.....||+.+ ........ ..
T Consensus 79 ~~~~~~~~~~~~i~~~lg~~~~~~~~v~~~C~s~~~---al~~A~-------~~i~~g~~~~vlvv~~e~~~~~~~~-~~ 147 (324)
T cd00827 79 SPIDKGKSAATYLAELLGLTNAEAFDLKQACYGGTA---ALQLAA-------NLVESGPWRYALVVASDIASYLLDE-GS 147 (324)
T ss_pred CCCCCCccHHHHHHHHcCCCCCceeehhhhhHHHHH---HHHHHH-------HHHHcCCCCEEEEEEEHHhhhcccC-CC
Confidence 3331 111222 58888774 556565 5566665555677665 33222210 11
Q ss_pred ccCcccccchhhhH-----h--hhcccCcccccc---------cccccccccc---ccccc-ccc--ccchhchHHhhhh
Q psy11265 610 ATDRSQYEGAEAFA-----H--IKNLEDTYFNRD---------IEQYFMSHNL---YRTRL-AYN--DFISATDRTEYEG 667 (945)
Q Consensus 610 ~~E~tqgaGAvA~l-----~--i~~~~~~~~s~d---------~~Df~Rp~~~---~~~~~-~~g--~~s~~~y~~~~~~ 667 (945)
..+...|+||+|+| . ...+.......+ .+++..|... ..... .++ ......+.+.+.
T Consensus 148 ~~~~~~gdgaaA~ll~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 226 (324)
T cd00827 148 ALEPTLGDGAAAMLVSRNPGILAAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIA- 226 (324)
T ss_pred CccccccCceEEEEEecCcccccCCceeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHH-
Confidence 45667899999988 1 123332222222 2333222100 00000 000 000111111111
Q ss_pred hhHHHhhhhcccccCCcchHHHHHHhCCCc-cchHHHHHHhhhccccccchhhHHHhhhcchHHHHhhhchhh-hhcccc
Q psy11265 668 AEAFAHIKNLEDTYFNRDIEQYFMSHNRTE-YEGAEAFAHIKNLEDTYFNRDIEQYFMSHSKQSFERLTKPGL-YLANLI 745 (945)
Q Consensus 668 ~~a~~~~~~~~~~~~~~~~~~~~~~H~p~~-~m~~~a~~~l~~~e~~~~~~~~~~~~~~~~~~~~~~kv~psl-~~~~~v 745 (945)
.+.+.. +...... +..++|+.|++.. .+.....+.+ .+. ..++.++. ..-+++
T Consensus 227 -~~~~~~--l~~~~~~-~~i~~~~~h~~~~~~~~~~~~~~l-----------------~~~----~~~~~~~~~~~~~~~ 281 (324)
T cd00827 227 -KVVRKA--LDRAGLS-EDIDYFVPHQPNGKKILEAVAKKL-----------------GGP----PEKASQTRWILLRRV 281 (324)
T ss_pred -HHHHHH--HHHcccc-cccceeeccCchHHHHHHHHHHHc-----------------cch----HhhhccchhhHHHHh
Confidence 111111 1222222 3457899998775 3322222221 111 12333333 255999
Q ss_pred CcccchhHHHHHHHHhccCCccccCCCcEEEEEecCCCccccc
Q psy11265 746 GNMYTPSLYGCLVSLLIQTPWERLQGMSRIGLFSYGSDNIKAL 788 (945)
Q Consensus 746 GN~YTaSlyl~L~SlL~~~~~~~L~G~~rI~l~s~GsG~~~~~ 788 (945)
||+++||++++|..+|++.... +| ++|+++++|.|.....
T Consensus 282 Gn~~sa~~~~~L~~~~~~~~~~--~G-d~vl~~~~G~G~~~~~ 321 (324)
T cd00827 282 GNMYAASILLGLASLLESGKLK--AG-DRVLLFSYGSGFTAEA 321 (324)
T ss_pred CchHHHHHHHHHHHHHhcCCCC--CC-CEEEEEEeccchhhee
Confidence 9999999999999999876433 89 9999999999976543
No 40
>PRK06840 hypothetical protein; Validated
Probab=99.06 E-value=1.7e-10 Score=130.00 Aligned_cols=58 Identities=16% Similarity=0.292 Sum_probs=54.1
Q ss_pred ccccccccceeeccccccchhHhhhhcCcCcccccccccccccccCCCcchhhhhhhc
Q psy11265 491 PENVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLT 548 (945)
Q Consensus 491 ~~~vGI~ai~~Y~P~~~l~~~el~~~~g~d~gKy~~Glgq~~msv~~~~EDivTma~~ 548 (945)
|++|+|.+++.|+|...++.++|++..|.+.+++...+|..++++++..|+..+||+.
T Consensus 2 ~~~v~I~~~~~~lP~~~v~~~~l~~~~g~~~~~~~~~~Gi~~r~~~~~~~~~~~la~~ 59 (339)
T PRK06840 2 EMNVGIVGTGVYLPKDVMTAEEIAEKTGIPEEVVIEKFGIYEKPVPGPEDHTSDMAIA 59 (339)
T ss_pred CCceEEEEEEEeCCCcccCHHHHHHHhCCCHHHHhhhcCcceEeeCCCCCCHHHHHHH
Confidence 5789999999999999999999999988888888788999999999999999999998
No 41
>KOG0543|consensus
Probab=99.04 E-value=1.7e-10 Score=129.16 Aligned_cols=58 Identities=31% Similarity=0.464 Sum_probs=54.3
Q ss_pred ccCCCCCCEEEEEEEEEEecCCCcEEecCCCCCcCeEEEccccchhhhHHHHHhcCCCCcE
Q psy11265 286 EDINSICLTVHFHFVTQLCDSDNTILDDSRKLGKPMQLVLGKKFKLEVWETLVKHMSIGEI 346 (945)
Q Consensus 286 ~~~P~~g~~V~VhY~g~l~~~dGtvfDsS~~~g~P~~f~lG~g~vI~G~e~~v~~M~~GE~ 346 (945)
.++|..|++|.|||+|+| .||+.||||++ ++||.|.+|+|.+|.||+.++.+|+.|+.
T Consensus 6 ~~~p~~g~~v~~hytg~l--~dgt~fdss~d-~~~~~~~lg~g~vi~~~~~gv~tm~~g~~ 63 (397)
T KOG0543|consen 6 TETPMTGDKVEVHYTGTL--LDGTKFDSSRD-GDPFKFDLGKGSVIKGWDLGVATMKKGEA 63 (397)
T ss_pred ccCCCCCceeEEEEeEEe--cCCeecccccC-CCceeeecCCCcccccccccccccccccc
Confidence 468999999999999999 59999999999 99999999999999999999999999554
No 42
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=99.04 E-value=1.7e-10 Score=129.39 Aligned_cols=251 Identities=16% Similarity=0.084 Sum_probs=145.2
Q ss_pred cccccccceeeccccccchhHhhhhcCcCcccccccccccccccCCCcchhhhhhhc-----------------------
Q psy11265 492 ENVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLT----------------------- 548 (945)
Q Consensus 492 ~~vGI~ai~~Y~P~~~l~~~el~~~~g~d~gKy~~Glgq~~msv~~~~EDivTma~~----------------------- 548 (945)
|.|+|.+++.|+|..+++.+|+++..+.+.+++....|.+++.++.+.|+...||+.
T Consensus 1 ~~v~I~~~g~~lP~~~v~~~e~~~~~~~~~~~i~~~~gi~~r~~~~~~~~~~~la~~A~~~aL~~ag~~~~dId~vi~~s 80 (326)
T CHL00203 1 MGVHILSTGSSVPNFSVENQQFEDIIETSDHWISTRTGIKKRHLAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIILAT 80 (326)
T ss_pred CccEEEEEEEECCCeEEcHHHHHHhcCCChhhEeeccCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 468999999999999999999999988766777788999999999999999999988
Q ss_pred ----------------cCcch-hhHHH-HHHHHhHHHHHHHHhCccccCCCcceeeecCCcceEEEec--ccccc-cccc
Q psy11265 549 ----------------LSIQC-YLGAL-DACYQGYRAKAAKLTGKELSLGDFDAVLFHTPYCKLVQKS--LARLA-YNDF 607 (945)
Q Consensus 549 ----------------Lsl~~-~~~~l-daCy~~~~~~~al~~a~~~~l~~~~~v~~~~p~~kLV~as--~ary~-~~~~ 607 (945)
|++.. ....+ .+|.++.. ++..|. +++..+.-.+.||+.+ ..++- ..+
T Consensus 81 ~~~~~~~~~~~~v~~~Lg~~~~~~~~v~~~Casg~~---al~~A~-------~~i~sg~~~~~Lvv~~e~~s~~~~~~~- 149 (326)
T CHL00203 81 STPDDLFGSASQLQAEIGATRAVAFDITAACSGFIL---ALVTAT-------QFIQNGSYKNILVVGADTLSKWIDWSD- 149 (326)
T ss_pred CCCCCCCchHHHHHHHhCCCCCceeeecccchhHHH---HHHHHH-------HHHHcCCCCEEEEEEehhhhCcCCccc-
Confidence 22211 11111 38888774 555555 5565554445687665 44432 222
Q ss_pred ccccCcccccchhhhH--hhh--cccCcccccc--ccccc----ccccccc---ccc---------cccccchhchHHhh
Q psy11265 608 ISATDRSQYEGAEAFA--HIK--NLEDTYFNRD--IEQYF----MSHNLYR---TRL---------AYNDFISATDRTEY 665 (945)
Q Consensus 608 ~~~~E~tqgaGAvA~l--~i~--~~~~~~~s~d--~~Df~----Rp~~~~~---~~~---------~~g~~s~~~y~~~~ 665 (945)
.......|+||.|++ .-. .+....+..| ..+++ .|....+ +.. .+|.......+..
T Consensus 150 -~~~~~~fgDga~A~ll~~~~~~~~~~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~- 227 (326)
T CHL00203 150 -RKTCILFGDGAGAAIIGASYENSILGFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQ- 227 (326)
T ss_pred -CCceEEEcceeeEEEEEEcCCCCeEEEEEEEcCCCcceEEecCCCCCcccccccccccCCcceEEECCHHHHHHHHHH-
Confidence 012234588888877 100 0001011111 11111 1100000 000 1111111111111
Q ss_pred hhhhHHHhhhhcccccCCcchHHHHHHhCCCccchHHHHHHhhhccccccchhhHHHhhhcchHHHHhhhchhhhhcccc
Q psy11265 666 EGAEAFAHIKNLEDTYFNRDIEQYFMSHNRTEYEGAEAFAHIKNLEDTYFNRDIEQYFMSHSKQSFERLTKPGLYLANLI 745 (945)
Q Consensus 666 ~~~~a~~~~~~~~~~~~~~~~~~~~~~H~p~~~m~~~a~~~l~~~e~~~~~~~~~~~~~~~~~~~~~~kv~psl~~~~~v 745 (945)
.|.+++.. +.......+.-|+|++|++..++... +...| .++.+ |+-. .+ ++.
T Consensus 228 -~~~~i~~~--L~~~g~~~~did~~~~hq~~~~~~~~-~~~~l----------------gl~~~----k~~~--~l-~~~ 280 (326)
T CHL00203 228 -VPAVIIKC--LNALNISIDEVDWFILHQANKRILEA-IANRL----------------SVPNS----KMIT--NL-EKY 280 (326)
T ss_pred -HHHHHHHH--HHHcCCCHHHCCEEEECCCCHHHHHH-HHHHh----------------CCCHH----Hhhh--HH-Hhh
Confidence 12233333 22223444555779999888665333 33322 22322 2211 22 799
Q ss_pred CcccchhHHHHHHHHhccCCccccCCCcEEEEEecCCCcc
Q psy11265 746 GNMYTPSLYGCLVSLLIQTPWERLQGMSRIGLFSYGSDNI 785 (945)
Q Consensus 746 GN~YTaSlyl~L~SlL~~~~~~~L~G~~rI~l~s~GsG~~ 785 (945)
||++++|++++|..++++...+ +| ++|+|+++|.|..
T Consensus 281 Gn~~sasi~~~L~~~~~~g~~~--~G-d~vll~~~G~G~s 317 (326)
T CHL00203 281 GNTSAASIPLALDEAIQNNKIQ--PG-QIIVLSGFGAGLT 317 (326)
T ss_pred CcHHHHHHHHHHHHHHHhCCCC--CC-CEEEEEEEchhhh
Confidence 9999999999999999864323 89 9999999999974
No 43
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.02 E-value=3.8e-10 Score=128.21 Aligned_cols=142 Identities=14% Similarity=0.076 Sum_probs=110.6
Q ss_pred CcccceeeeeeecCCccccHHHH-HhhcCCC---cccchhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhcc
Q psy11265 6 PENVGILGIEFYFPSQYVDQTEL-EKHDQVS---AGKYTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQ 81 (945)
Q Consensus 6 ~~~VGI~ai~~y~p~~yvd~~~L-~~~~gv~---~~Kyt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~ 81 (945)
-++|+|.++..|+|+.+|+++++ ++..+-+ ..|.....|.+++.++.+.|+..+||+.|++++|++.++++++|+.
T Consensus 5 ~~~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ 84 (353)
T PRK12880 5 FDKAKISGICVSVPEHKICIDDELESVFSNDIKTLKRMKKVIGLNTRYICDENTCVSDLGKHAANTLLQGLNIDKNSLDA 84 (353)
T ss_pred ccccEEEEEEEECCCeEecHHHHHHHhcCcchhhhhhhhhccCceEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 35799999999999999999874 4443322 2356667899999999999999999999999999999999999999
Q ss_pred cccccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCccee
Q psy11265 82 LLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTL 161 (945)
Q Consensus 82 l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~L 161 (945)
| +++|. +.=.......+.....|+.+.++ .++++..+|.|++.+ |..|..+++ + ++.+ +|
T Consensus 85 l-I~~t~-----t~d~~~P~~a~~v~~~Lg~~~~~--------~~~di~~~C~g~~~a-L~~A~~~i~--~--~~~~-~L 144 (353)
T PRK12880 85 L-IVVTQ-----SPDFFMPSTACYLHQLLNLSSKT--------IAFDLGQACAGYLYG-LFVAHSLIQ--S--GLGK-IL 144 (353)
T ss_pred E-EEEcC-----CCCCCCCcHHHHHHHHhCCCCCc--------eEEehhhhhHHHHHH-HHHHHHHHH--c--CCCC-EE
Confidence 9 89998 11111222333333556665555 678999999999999 999999996 3 3556 88
Q ss_pred e-ecccc
Q psy11265 162 V-TKLSD 167 (945)
Q Consensus 162 V-asdia 167 (945)
| ++|..
T Consensus 145 Vv~~e~~ 151 (353)
T PRK12880 145 LICGDTL 151 (353)
T ss_pred EEEehhh
Confidence 8 88864
No 44
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.00 E-value=4.3e-10 Score=125.89 Aligned_cols=139 Identities=14% Similarity=0.123 Sum_probs=112.4
Q ss_pred ccceeeeeeecCCccccHHHHHhhcCCCcccchhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhcccccccC
Q psy11265 8 NVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVES 87 (945)
Q Consensus 8 ~VGI~ai~~y~p~~yvd~~~L~~~~gv~~~Kyt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~T 87 (945)
.|+|.++..|+|...|+.+++++..|.+++++...+|..++.++.+.|++.+||+.||+++|++.++++++|+.| +++|
T Consensus 3 ~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~i~~~~Gi~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~~Id~l-i~~t 81 (326)
T PRK05963 3 SSRIAGFGHAVPDRRVENAEIEAQLGLETGWIERRTGIRCRRWAAPDETLSDLAASAGDMALSDAGIERSDIALT-LLAT 81 (326)
T ss_pred ccEEEEEEEECCCCeecHHHHHHHcCCCHHHhhhccCCeEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEC
Confidence 689999999999999999999999999999999999999999999999999999999999999999999999988 7888
Q ss_pred CcccccccccccchhhhhhcccccccCccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 88 PEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 88 e~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
. +-+ ..|-. ........|+.+ ++ ..+++.++|.|++.| |..|..+++ + + .+++|| ++|.
T Consensus 82 ~-~~d-~~~p~---~a~~v~~~Lg~~-~~--------~~~di~~~C~g~~~a-L~~A~~~l~--~--~-~~~aLVv~~d~ 141 (326)
T PRK05963 82 S-TPD-HLLPP---SAPLLAHRLGLQ-NS--------GAIDLAGACAGFLYA-LVLADGFVR--A--Q-GKPVLVVAANI 141 (326)
T ss_pred C-CCC-CCCCc---HHHHHHHHhCCC-CC--------ceeeccchhhHHHHH-HHHHHHHHH--c--C-CCeEEEEEech
Confidence 6 111 01111 111222344432 33 568999999999999 888888886 3 2 378998 9887
Q ss_pred c
Q psy11265 167 D 167 (945)
Q Consensus 167 a 167 (945)
.
T Consensus 142 ~ 142 (326)
T PRK05963 142 L 142 (326)
T ss_pred h
Confidence 4
No 45
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=98.99 E-value=4.1e-10 Score=129.12 Aligned_cols=254 Identities=13% Similarity=0.063 Sum_probs=145.1
Q ss_pred ccccccccceeeccccccchhHhhhhcCcCcccccccccccccccCCCcchhhhhhhc----------------------
Q psy11265 491 PENVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLT---------------------- 548 (945)
Q Consensus 491 ~~~vGI~ai~~Y~P~~~l~~~el~~~~g~d~gKy~~Glgq~~msv~~~~EDivTma~~---------------------- 548 (945)
++.++|.+++.|+|...++.+++.+..+.++++.....|..++.++..+|+..+||+.
T Consensus 45 ~~~~~I~g~g~~lP~~~v~n~el~~~~~~~~~~i~~~tGi~~R~~~~~~~~~~~La~~Aa~~aL~~agi~~~dId~li~~ 124 (379)
T PLN02326 45 GSGSKLVGCGSAVPKLLITNDDLSKLVDTSDEWIATRTGIRNRRVLSGDETLTSLAVEAAKKALEMAGVDPEDVDLVLLC 124 (379)
T ss_pred cCCcEEEEEEEECCCceecHHHHHHhcCCchhheecccCcceEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 4689999999999999999999999888777777778899999999999999999998
Q ss_pred -----------------cCcc-hhhHHH-HHHHHhHHHHHHHHhCccccCCCcceeeecCCcceEEEec--cccccc-cc
Q psy11265 549 -----------------LSIQ-CYLGAL-DACYQGYRAKAAKLTGKELSLGDFDAVLFHTPYCKLVQKS--LARLAY-ND 606 (945)
Q Consensus 549 -----------------Lsl~-~~~~~l-daCy~~~~~~~al~~a~~~~l~~~~~v~~~~p~~kLV~as--~ary~~-~~ 606 (945)
|++. +....+ .+|.++.. |+..|. .++..+.....||+.+ ..++.. ++
T Consensus 125 s~~~~~~~~~a~~v~~~LG~~~~~~~dv~~~Ca~~~~---aL~~A~-------~~l~~g~~~~vLVv~~e~~s~~~~~~d 194 (379)
T PLN02326 125 TSSPDDLFGSAPQVQAALGCTNALAFDLTAACSGFVL---GLVTAA-------RFIRGGGYKNVLVIGADALSRYVDWTD 194 (379)
T ss_pred eCCCCccCcHHHHHHHHhCCCCCceeeccccchHHHH---HHHHHH-------HHHHcCCCCEEEEEEechhcCCCCccc
Confidence 3321 111222 48888874 566555 5566554445687665 555432 22
Q ss_pred cccccCcccccchhhhH--h-------hhccc---Cccccccc----cccc-----ccc-ccccccccccccc------h
Q psy11265 607 FISATDRSQYEGAEAFA--H-------IKNLE---DTYFNRDI----EQYF-----MSH-NLYRTRLAYNDFI------S 658 (945)
Q Consensus 607 ~~~~~E~tqgaGAvA~l--~-------i~~~~---~~~~s~d~----~Df~-----Rp~-~~~~~~~~~g~~s------~ 658 (945)
...-...|+||+|++ . +..+. .+.+...+ .+.. .|. ...+.+.....+. .
T Consensus 195 --~~~~~lfGDGAaAvlL~~~~~~~~~i~~~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 272 (379)
T PLN02326 195 --RGTCILFGDGAGAVVLQACDDDEDGLLGFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGK 272 (379)
T ss_pred --cCceEEEcceeEEEEEEEcCCCCCceEEEEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecCH
Confidence 011124688888877 1 11000 01010000 1110 000 0000000000110 0
Q ss_pred hchHHhhh-hhhHHHhhhhcccccCCcchHHHHHHhCCCccchHHHHHHhhhccccccchhhHHHhhhcchHHHHhhhch
Q psy11265 659 ATDRTEYE-GAEAFAHIKNLEDTYFNRDIEQYFMSHNRTEYEGAEAFAHIKNLEDTYFNRDIEQYFMSHSKQSFERLTKP 737 (945)
Q Consensus 659 ~~y~~~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~H~p~~~m~~~a~~~l~~~e~~~~~~~~~~~~~~~~~~~~~~kv~p 737 (945)
..+..+.. .+.+++.+ +.......+..|+|++|++..++-....+.+ .++. .|+..
T Consensus 273 ~v~~~~~~~~~~~i~~~--L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~L-----------------gl~~----ek~~~ 329 (379)
T PLN02326 273 EVFKFAVRCVPQVIESA--LQKAGLTAESIDWLLLHQANQRIIDAVAQRL-----------------GIPP----EKVIS 329 (379)
T ss_pred HHHHHHHHHHHHHHHHH--HHHcCCCHHHCCEEEECCCCHHHHHHHHHHc-----------------CCCH----HHeee
Confidence 01100000 00122222 2222333445577999988755533322221 2222 23332
Q ss_pred hhhhccccCcccchhHHHHHHHHhccCCccccCCCcEEEEEecCCCcc
Q psy11265 738 GLYLANLIGNMYTPSLYGCLVSLLIQTPWERLQGMSRIGLFSYGSDNI 785 (945)
Q Consensus 738 sl~~~~~vGN~YTaSlyl~L~SlL~~~~~~~L~G~~rI~l~s~GsG~~ 785 (945)
. + +++||+.+||+++.|..++++.... +| ++|+|+++|.|..
T Consensus 330 ~--l-~~~GNt~sAsi~~~L~~~~~~g~~~--~G-d~vll~~~G~G~t 371 (379)
T PLN02326 330 N--L-ANYGNTSAASIPLALDEAVRSGKVK--KG-DVIATAGFGAGLT 371 (379)
T ss_pred c--H-hhcCcHHHHHHHHHHHHHHHcCCCC--CC-CEEEEEEEChhhe
Confidence 2 3 6999999999999999999865322 89 9999999999965
No 46
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=98.96 E-value=5.5e-10 Score=126.99 Aligned_cols=254 Identities=16% Similarity=0.061 Sum_probs=147.6
Q ss_pred cccccceeeccccccchhHhhhhcCc--Cc----------ccccccccccccccCCC--c--------------------
Q psy11265 494 VGILGIEFYFPSQYVDQTELEKHDQV--SA----------GKYTIGLGQAKMGFCSD--L-------------------- 539 (945)
Q Consensus 494 vGI~ai~~Y~P~~~l~~~el~~~~g~--d~----------gKy~~Glgq~~msv~~~--~-------------------- 539 (945)
+.|.+++.|+|..+++++++.+.-+. +. .+.....|.+++.+..+ .
T Consensus 2 ~~I~~~~~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (361)
T cd00831 2 ATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERNDIA 81 (361)
T ss_pred cEEEEEEEeCCCCcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcchhhH
Confidence 56899999999999999999886431 11 33344456666666554 2
Q ss_pred -chhhhhhhc---------------------------------------cCcc--hhhHHH--HHHHHhHHHHHHHHhCc
Q psy11265 540 -EDINSICLT---------------------------------------LSIQ--CYLGAL--DACYQGYRAKAAKLTGK 575 (945)
Q Consensus 540 -EDivTma~~---------------------------------------Lsl~--~~~~~l--daCy~~~~~~~al~~a~ 575 (945)
|++.+||+. |++. +....+ .+|.++.. |+..|.
T Consensus 82 ~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~---al~~A~ 158 (361)
T cd00831 82 LEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAI---ALDLAK 158 (361)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchhccccccchhHHH---HHHHHH
Confidence 479999988 6665 334444 38999884 667666
Q ss_pred cccCCCcceeeecCCcceEEEec-c-cc-ccccc-ccc-ccCcccccchhhhH-----hh-------hcccCcccccccc
Q psy11265 576 ELSLGDFDAVLFHTPYCKLVQKS-L-AR-LAYND-FIS-ATDRSQYEGAEAFA-----HI-------KNLEDTYFNRDIE 638 (945)
Q Consensus 576 ~~~l~~~~~v~~~~p~~kLV~as-~-ar-y~~~~-~~~-~~E~tqgaGAvA~l-----~i-------~~~~~~~~s~d~~ 638 (945)
+++..++..+.||+++ . .+ +...+ ... ......|+||+|++ .. ..+. +.++..+.
T Consensus 159 -------~~~~~~~~~~aLvv~~e~~s~~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~-~~~~~~~p 230 (361)
T cd00831 159 -------DLLEANPGARVLVVSTELCSLWYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELV-RAASTLLP 230 (361)
T ss_pred -------HHHHHCCCCEEEEEEeecccceeCCCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeee-cccceeee
Confidence 6677665555677665 3 33 11111 000 01345799999987 10 1111 22222111
Q ss_pred cc-----ccccccccccccccccchhchHHhhhhhhHHHhhhhcccc--cCCcchHHHHHHhCCCccchHHHHHHhhhcc
Q psy11265 639 QY-----FMSHNLYRTRLAYNDFISATDRTEYEGAEAFAHIKNLEDT--YFNRDIEQYFMSHNRTEYEGAEAFAHIKNLE 711 (945)
Q Consensus 639 Df-----~Rp~~~~~~~~~~g~~s~~~y~~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~~H~p~~~m~~~a~~~l~~~e 711 (945)
+. |++.. .......+........+.+. .+++.+ +... ....+..++|++|++..++. +++...+
T Consensus 231 ~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~--~~i~~~--L~~~~~g~~~~did~~~~H~~~~~i~-~~v~~~l--- 301 (361)
T cd00831 231 DSEDAMGWHLGE-EGLTFVLSRDVPRLVEKNLE--RVLRKL--LARLGIGLFKLAFDHWCVHPGGRAVL-DAVEKAL--- 301 (361)
T ss_pred cCCCceEEEEEc-ceEEEEeChhHHHHHHHHHH--HHHHHH--hccccCCCccccceEEEECCCChHHH-HHHHHHc---
Confidence 11 22210 01111112222222222222 233333 2222 33445678899999876553 3333221
Q ss_pred ccccchhhHHHhhhcchHHHHhhhchhhhhccccCcccchhHHHHHHHHhccCCccccCCCcEEEEEecCCCcccc
Q psy11265 712 DTYFNRDIEQYFMSHSKQSFERLTKPGLYLANLIGNMYTPSLYGCLVSLLIQTPWERLQGMSRIGLFSYGSDNIKA 787 (945)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~~~kv~psl~~~~~vGN~YTaSlyl~L~SlL~~~~~~~L~G~~rI~l~s~GsG~~~~ 787 (945)
.++ .+++.+|...-++.||+++||++++|..++++...+ +| ++|++++||.|....
T Consensus 302 -------------gl~----~~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g~~~--~G-d~vll~~~G~G~s~~ 357 (361)
T cd00831 302 -------------GLS----PEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVK--RG-DRGLLIAFGPGFTCE 357 (361)
T ss_pred -------------CCC----HHHHHHHHHHHHHhCCchhccHHHHHHHHHHhCCCC--CC-CEEEEEEEcCCceee
Confidence 222 356666666679999999999999999999875422 89 999999999997643
No 47
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=98.94 E-value=5.1e-09 Score=117.77 Aligned_cols=142 Identities=18% Similarity=0.197 Sum_probs=112.2
Q ss_pred cccceeeeeeecCCccccHHHHHhh-------cCCCcccchhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhh
Q psy11265 7 ENVGILGIEFYFPSQYVDQTELEKH-------DQVSAGKYTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQI 79 (945)
Q Consensus 7 ~~VGI~ai~~y~p~~yvd~~~L~~~-------~gv~~~Kyt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~I 79 (945)
.+|+|.++..|+|+..|++++++++ .+.++.++....|..++.+..+.+++.+||..|++++|++.++++++|
T Consensus 4 ~~v~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~I 83 (338)
T PRK09258 4 SNVAILSLAYELAPVVVTSSEIEERLAPLYERLRLPPGQLEALTGIRERRWWPEGTQLSDGAIAAGRKALAEAGIDPSDI 83 (338)
T ss_pred cceEEEEEEecCCCccCcHHHHHHHhhhcccccCCChhHhhhhcCceeEecCCCCCCHHHHHHHHHHHHHHHcCCCHHHC
Confidence 5699999999999999999999985 356777788788999999999999999999999999999999999999
Q ss_pred cccccccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcc
Q psy11265 80 GQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLK 159 (945)
Q Consensus 80 g~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~ 159 (945)
+.| .++|.. ......+ ........|+...++ ..+++.++|.|++.| |..|..+|+ + ++.+.
T Consensus 84 d~l-i~~s~~---~~~~~p~--~a~~v~~~lgl~~~~--------~~~~v~~~C~~~~~a-l~~A~~~i~--~--g~~~~ 144 (338)
T PRK09258 84 GLL-INTSVC---RDYLEPA--TACRVHHNLGLPKSC--------ANFDVSNACLGFLNG-MLDAANMIE--L--GQIDY 144 (338)
T ss_pred CEE-EEEcCC---CCCCCCh--HHHHHHHHcCCCCCC--------ceeehhhhhHHHHHH-HHHHHHHHH--c--CCCCE
Confidence 998 787761 0111111 112233455554444 567888999999999 899999986 3 35688
Q ss_pred eee-ecccc
Q psy11265 160 TLV-TKLSD 167 (945)
Q Consensus 160 ~LV-asdia 167 (945)
+|| ++|..
T Consensus 145 ~Lvv~~e~~ 153 (338)
T PRK09258 145 ALVVSGESA 153 (338)
T ss_pred EEEEEeccc
Confidence 998 88874
No 48
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=98.86 E-value=3.3e-09 Score=118.54 Aligned_cols=142 Identities=18% Similarity=0.116 Sum_probs=109.7
Q ss_pred CcccceeeeeeecCCccccHHHHHhhcCCCcccchhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhcccccc
Q psy11265 6 PENVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQV 85 (945)
Q Consensus 6 ~~~VGI~ai~~y~p~~yvd~~~L~~~~gv~~~Kyt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v 85 (945)
+++|+|.+|..|+|+..|+++|++++.+.+.++....+|..+..++.+.|+..+||+.|++++|++.++++++|+.| .+
T Consensus 2 ~~~~~I~~ig~~~P~~~v~~~e~~~~~~~~~~~i~~~~Gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~l-i~ 80 (325)
T PRK12879 2 MSYARITGIGTYVPPRVLTNDDLETFIDTSDEWIVQRTGIKERRIAHVEEYTSDLAIKAAERALARAGLDAEDIDLI-IV 80 (325)
T ss_pred CCCCEEEEEEEECCCcEEcHHHHHHhcCCCHHHhhhccCceEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EE
Confidence 57899999999999999999999999888777766678999999999999999999999999999999999999988 77
Q ss_pred cCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ec
Q psy11265 86 ESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TK 164 (945)
Q Consensus 86 ~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-as 164 (945)
+|..- +...+ + ........|+.. ++ ..+++.++|.|++.| |..|..+|+ + ++...+|| ++
T Consensus 81 ~~~~~-~~~~~--~--~a~~l~~~lg~~-~~--------~~~~v~~~C~~~~~a-l~~A~~~l~--~--g~~~~~Lvv~~ 141 (325)
T PRK12879 81 ATTTP-DYLFP--S--TASQVQARLGIP-NA--------AAFDINAACAGFLYG-LETANGLIT--S--GLYKKVLVIGA 141 (325)
T ss_pred EcCCC-CCCCC--h--HHHHHHHHhCCC-CC--------cEEEECccchHHHHH-HHHHHHHHH--c--CCCCEEEEEEe
Confidence 76510 00000 0 111112334432 13 456777899999999 898999996 3 35678888 88
Q ss_pred ccc
Q psy11265 165 LSD 167 (945)
Q Consensus 165 dia 167 (945)
|..
T Consensus 142 e~~ 144 (325)
T PRK12879 142 ERL 144 (325)
T ss_pred hhh
Confidence 863
No 49
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=98.84 E-value=1.2e-08 Score=113.50 Aligned_cols=140 Identities=19% Similarity=0.187 Sum_probs=110.0
Q ss_pred ccceeeeeeecCCccccHHHHHhhcCCCcccchhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhcccccccC
Q psy11265 8 NVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVES 87 (945)
Q Consensus 8 ~VGI~ai~~y~p~~yvd~~~L~~~~gv~~~Kyt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~T 87 (945)
+|+|.+|..|+|+..++++|+++..|.+.+++...+|.++..++.+.|+...|++.|++++|++.++++++|+.| +++|
T Consensus 1 ~~~I~~i~~~lP~~~~~~~~~~~~~~~~~~~~~~~~Gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~l-i~~~ 79 (320)
T cd00830 1 NARILGIGSYLPERVVTNDELEKRLDTSDEWIRTRTGIRERRIADPGETTSDLAVEAAKKALEDAGIDADDIDLI-IVAT 79 (320)
T ss_pred CCEEEEEEEECCCcEEcHHHHHHHcCCCHHHhhhccCceEEeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEc
Confidence 689999999999999999999999998888888889999999999999999999999999999999999999988 7776
Q ss_pred CcccccccccccchhhhhhcccccccCccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 88 PEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 88 e~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
.... ....+ ........++.. ++ ..+++.++|.+++.| |..|..+|+ + ++...+|| ++|.
T Consensus 80 ~~~~---~~~~~--~~~~l~~~lg~~-~~--------~~~~v~~~C~s~~~a-l~~A~~~i~--~--g~~~~vLvv~~e~ 140 (320)
T cd00830 80 STPD---YLFPA--TACLVQARLGAK-NA--------AAFDINAACSGFLYG-LSTAAGLIR--S--GGAKNVLVVGAET 140 (320)
T ss_pred CCCC---CCCCc--HHHHHHHHhCCC-CC--------cEeeccccchHHHHH-HHHHHHHHH--c--CCCCEEEEEEehh
Confidence 5100 00001 111122334432 33 456777899999999 888888886 3 35578888 8776
Q ss_pred c
Q psy11265 167 D 167 (945)
Q Consensus 167 a 167 (945)
.
T Consensus 141 ~ 141 (320)
T cd00830 141 L 141 (320)
T ss_pred h
Confidence 3
No 50
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=98.79 E-value=6.5e-09 Score=116.66 Aligned_cols=140 Identities=12% Similarity=0.132 Sum_probs=109.2
Q ss_pred cccceeeeeeecCCccccHHHHHhhcCCCcccchhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhccccccc
Q psy11265 7 ENVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVE 86 (945)
Q Consensus 7 ~~VGI~ai~~y~p~~yvd~~~L~~~~gv~~~Kyt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~ 86 (945)
|+|+|.++..|+|+.+|+++|++++-+.+.+++...+|..+..++.+.|+...||+.|++++|++.+++|++|+.| +++
T Consensus 1 ~~v~I~~~g~~lP~~~v~~~e~~~~~~~~~~~i~~~~gi~~r~~~~~~~~~~~la~~A~~~aL~~ag~~~~dId~v-i~~ 79 (326)
T CHL00203 1 MGVHILSTGSSVPNFSVENQQFEDIIETSDHWISTRTGIKKRHLAPSSTSLTKLAAEAANKALDKAHMDPLEIDLI-ILA 79 (326)
T ss_pred CccEEEEEEEECCCeEEcHHHHHHhcCCChhhEeeccCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEE
Confidence 5799999999999999999999999988777777788888889999999999999999999999999999999999 777
Q ss_pred CCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 87 SPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 87 Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
|.... ..+ +. .......|+.. ++ ..+++.++|.|++.| |..|..+|+ ++ ....+|| ++|
T Consensus 80 s~~~~--~~~---~~-~~~v~~~Lg~~-~~--------~~~~v~~~Casg~~a-l~~A~~~i~--sg--~~~~~Lvv~~e 139 (326)
T CHL00203 80 TSTPD--DLF---GS-ASQLQAEIGAT-RA--------VAFDITAACSGFILA-LVTATQFIQ--NG--SYKNILVVGAD 139 (326)
T ss_pred eCCCC--CCC---ch-HHHHHHHhCCC-CC--------ceeeecccchhHHHH-HHHHHHHHH--cC--CCCEEEEEEeh
Confidence 64100 011 11 11112334332 23 346888899999999 889999996 33 4578888 888
Q ss_pred cc
Q psy11265 166 SD 167 (945)
Q Consensus 166 ia 167 (945)
..
T Consensus 140 ~~ 141 (326)
T CHL00203 140 TL 141 (326)
T ss_pred hh
Confidence 63
No 51
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=98.79 E-value=8.6e-09 Score=115.63 Aligned_cols=141 Identities=18% Similarity=0.170 Sum_probs=110.4
Q ss_pred cccceeeeeeecCCccccHHHHHhhcCCCcccchhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhccccccc
Q psy11265 7 ENVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVE 86 (945)
Q Consensus 7 ~~VGI~ai~~y~p~~yvd~~~L~~~~gv~~~Kyt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~ 86 (945)
.+|+|.++..|+|...|++++|++..|.+.+++....|..+..+.. .|+...||..|++++|++.+++|++|+.| .++
T Consensus 3 ~~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~-~~~~~~la~~Aa~~aL~~ag~~~~dId~l-i~~ 80 (329)
T PRK07204 3 RYISIKGIGTYLPKRKVDSLELDKKLDLPEGWVLKKSGVKTRHFVD-GETSSYMGAEAAKKAVEDAKLTLDDIDCI-ICA 80 (329)
T ss_pred CCcEEEEEEEeCCCceecHHHHHHhhCCCHhHhhhccCceEEeecC-CCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEE
Confidence 5699999999999999999999999999888888889999999998 89999999999999999999999999988 777
Q ss_pred CCcccccccccccchhhhhhcccccccC-ccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ec
Q psy11265 87 SPEEYEQESWQLTEAEKLASIPKLKEDG-NTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TK 164 (945)
Q Consensus 87 Te~~~~~s~wd~s~~d~sk~~~~l~~~G-n~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-as 164 (945)
|.. ...............|+..+ .+ .++++.++|.|++.| |..|..+++ + ++.+++|| ++
T Consensus 81 ~~~-----~~~~~p~~a~~v~~~lgl~~~~~--------~~~~v~~~C~~~~~a-l~~a~~~l~--~--g~~~~~Lvv~~ 142 (329)
T PRK07204 81 SGT-----IQQAIPCTASLIQEQLGLQHSGI--------PCFDINSTCLSFITA-LDTISYAIE--C--GRYKRVLIISS 142 (329)
T ss_pred CCC-----CCCCCccHHHHHHHHhCCCCCCc--------eEEEccchhHHHHHH-HHHHHHHHH--C--CCCCEEEEEEe
Confidence 751 00000111111223455443 13 457888899999999 888888885 3 34577888 99
Q ss_pred ccc
Q psy11265 165 LSD 167 (945)
Q Consensus 165 dia 167 (945)
|..
T Consensus 143 e~~ 145 (329)
T PRK07204 143 EIS 145 (329)
T ss_pred ccc
Confidence 875
No 52
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=98.76 E-value=3.1e-09 Score=116.62 Aligned_cols=75 Identities=21% Similarity=0.317 Sum_probs=47.9
Q ss_pred eee-ccccccccccccCcccCCCCCCc-cccCcc----hhHHHHHHHHHHHHhhhccCC-CCCCccccceee-eecCCCc
Q psy11265 182 EFT-RILAAKKENLHKYPFRSETPPGE-YLFDGS----YYLESIDDFHRRHYKKYEAGT-AWPENVGILGIE-FYFPSQY 253 (945)
Q Consensus 182 ~~~-~~~~~~~~~~~~~Df~rP~~~~~-~~vdG~----~YL~~ld~~~~~y~~r~~~~~-~~~~~~gi~a~e-i~fh~p~ 253 (945)
+|+ ...+. |+.|++|||||+..+| ++|||+ |||++++.||++|.+|..... .......+++++ ++||.||
T Consensus 2 v~d~~~~~~--~m~~~yDFyKP~~~seyP~VDG~~S~~~Yl~ald~~y~~y~~k~~~~~~~~~~~~~l~~~d~~~fH~Py 79 (282)
T PF08540_consen 2 VFDRGLRGS--HMEHVYDFYKPDLSSEYPVVDGKLSIQCYLDALDKCYKRYKEKVEKLANRGNKGTSLDDFDYVCFHSPY 79 (282)
T ss_dssp EEETTEEEE--EE----SEE-BTTT-SS-EE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSST--GGG-SEEEE--SS
T ss_pred cccCCCcee--ehhhchhccCCCCCCCCcEEchHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCccccceEEEecCc
Confidence 566 35555 8899999999997766 689997 999999999999999974210 012345678888 9999999
Q ss_pred ccccc
Q psy11265 254 VDQTE 258 (945)
Q Consensus 254 v~m~e 258 (945)
.||+.
T Consensus 80 ~klv~ 84 (282)
T PF08540_consen 80 CKLVQ 84 (282)
T ss_dssp HHHHH
T ss_pred hHHHH
Confidence 99986
No 53
>PRK06840 hypothetical protein; Validated
Probab=98.74 E-value=1.4e-08 Score=114.47 Aligned_cols=143 Identities=13% Similarity=0.161 Sum_probs=108.3
Q ss_pred CCcccceeeeeeecCCccccHHHHHhhcCCCcccchhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhccccc
Q psy11265 5 WPENVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQ 84 (945)
Q Consensus 5 ~~~~VGI~ai~~y~p~~yvd~~~L~~~~gv~~~Kyt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~ 84 (945)
.||+|+|.++..|+|...|+.++|++..|.+.+++...+|..+..++.+.|+..+||+.|++++|++.+++|++|+.| +
T Consensus 1 ~~~~v~I~~~~~~lP~~~v~~~~l~~~~g~~~~~~~~~~Gi~~r~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~l-i 79 (339)
T PRK06840 1 MEMNVGIVGTGVYLPKDVMTAEEIAEKTGIPEEVVIEKFGIYEKPVPGPEDHTSDMAIAAAKPALKQAGVDPAAIDVV-I 79 (339)
T ss_pred CCCceEEEEEEEeCCCcccCHHHHHHHhCCCHHHHhhhcCcceEeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-E
Confidence 378999999999999999999999999999888887789999999999999999999999999999999999999988 5
Q ss_pred ccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-e
Q psy11265 85 VESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-T 163 (945)
Q Consensus 85 v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-a 163 (945)
+.+........|. ........++.. ++ ..+++.++|.|++.| |..|..+|+ +. +..+.+|| +
T Consensus 80 ~~~~~~~~~~~p~----~a~~l~~~lGl~-~~--------~~~~v~~~C~~~~~a-l~~A~~~l~--~~-g~~~~~Lvv~ 142 (339)
T PRK06840 80 YIGSEHKDYPVWS----SAPKIQHEIGAK-NA--------WAFDIMAVCASFPIA-LKVAKDLLY--SD-PSIENVLLVG 142 (339)
T ss_pred EeccCCCCCCCCc----hHHHHHHHhCCC-Cc--------ccccccccchHHHHH-HHHHHHHHh--cC-CCccEEEEEe
Confidence 4432000000110 011122334432 23 457788999999999 999999996 21 23456777 6
Q ss_pred cc
Q psy11265 164 KL 165 (945)
Q Consensus 164 sd 165 (945)
+|
T Consensus 143 ~~ 144 (339)
T PRK06840 143 GY 144 (339)
T ss_pred ec
Confidence 64
No 54
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=98.74 E-value=4.7e-09 Score=120.40 Aligned_cols=84 Identities=21% Similarity=0.215 Sum_probs=55.9
Q ss_pred cCCcchHHHHHHhCCCccchHHHHHHhhhccccccchhhHHHhhhcchHHHHhhhchhhhhccccCcccchhHHHHHHHH
Q psy11265 681 YFNRDIEQYFMSHNRTEYEGAEAFAHIKNLEDTYFNRDIEQYFMSHSKQSFERLTKPGLYLANLIGNMYTPSLYGCLVSL 760 (945)
Q Consensus 681 ~~~~~~~~~~~~H~p~~~m~~~a~~~l~~~e~~~~~~~~~~~~~~~~~~~~~~kv~psl~~~~~vGN~YTaSlyl~L~Sl 760 (945)
....+..|++++|++..+|-....+.+. +....++. .|+-..+ .++||+++||++++|..+
T Consensus 286 gl~~~DId~~v~Hq~n~~~~~~v~~~l~------------~~~~gl~~----~k~~~~~---~~~GNt~sAsipi~L~~a 346 (378)
T PRK06816 286 NLDPDDIDYFLPHYSSEYFREKIVELLA------------KAGFMIPE----EKWFTNL---ATVGNTGSASIYIMLDEL 346 (378)
T ss_pred CCChhhCCEEeeCcccHHHHHHHHHHHH------------hccCCCCh----hheEEec---cccccccchHHHHHHHHH
Confidence 4444566789999998776554444330 00001221 2222222 599999999999999999
Q ss_pred hccCCccccCCCcEEEEEecCCCccc
Q psy11265 761 LIQTPWERLQGMSRIGLFSYGSDNIK 786 (945)
Q Consensus 761 L~~~~~~~L~G~~rI~l~s~GsG~~~ 786 (945)
+++... .+| ++|+++++|||...
T Consensus 347 ~~~g~~--~~G-d~vl~~~~~s~~~~ 369 (378)
T PRK06816 347 LNSGRL--KPG-QKILCFVPESGRFS 369 (378)
T ss_pred HHcCCC--CCC-CEEEEEEecccchh
Confidence 987543 399 99999999998543
No 55
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=98.71 E-value=2.2e-08 Score=111.74 Aligned_cols=253 Identities=19% Similarity=0.153 Sum_probs=151.5
Q ss_pred cccccccceeeccccccchhHhhhhcCcCcccccccccccccccCCCcchhhhhhhc-----------------------
Q psy11265 492 ENVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLT----------------------- 548 (945)
Q Consensus 492 ~~vGI~ai~~Y~P~~~l~~~el~~~~g~d~gKy~~Glgq~~msv~~~~EDivTma~~----------------------- 548 (945)
+++.|.+++.|.|...++-+++++.-+.+.+-...-.|.+++.++.++|..-+||+.
T Consensus 2 ~~a~i~g~G~~lP~~~vtn~d~e~~~~tsdewI~~rtGir~R~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~aT 81 (323)
T COG0332 2 MNAKILGIGSYLPERVVTNADLEKRVDTSDEWIETRTGIRERRIAADDETTSDLAVEAARKALEDAGISPDDIDLIIVAT 81 (323)
T ss_pred CcceEEEEEeecCCcccChHHHHhccCCCcceeeeecCCceeeecCCCccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 578999999999999999999998778888877778899999999999999999998
Q ss_pred -----------------cCcch-hhHHH-HHHHHhHHHHHHHHhCccccCCCcceeeecCCcceEEEec--cccc-cccc
Q psy11265 549 -----------------LSIQC-YLGAL-DACYQGYRAKAAKLTGKELSLGDFDAVLFHTPYCKLVQKS--LARL-AYND 606 (945)
Q Consensus 549 -----------------Lsl~~-~~~~l-daCy~~~~~~~al~~a~~~~l~~~~~v~~~~p~~kLV~as--~ary-~~~~ 606 (945)
|++.. ..+.+ -+|-|-. +||..|. .+|..+.-.+.||+.+ ++|+ +..|
T Consensus 82 ~tpd~~~Ps~A~~vq~~LG~~~~~afDl~aaCsgf~---yaL~~A~-------~~i~sG~~k~vLVVg~e~~S~~ld~~d 151 (323)
T COG0332 82 STPDHLFPSTACLVQARLGLGGAPAFDLQAACSGFL---YALSVAD-------GLIRSGGYKNVLVVGAETLSRILDWTD 151 (323)
T ss_pred CCcccCCChHHHHHHHHhCCCCcceeechhhhHHHH---HHHHHHH-------HHHHcCCCCEEEEEehhHhhccCCHhh
Confidence 44444 22222 3887655 5777776 5666665555799887 5554 3333
Q ss_pred cccccCcccccchhhhH-hhhcccCccc----ccccccc---ccccccccc-cccc-cccchhchHHhhhhhhHHHhh--
Q psy11265 607 FISATDRSQYEGAEAFA-HIKNLEDTYF----NRDIEQY---FMSHNLYRT-RLAY-NDFISATDRTEYEGAEAFAHI-- 674 (945)
Q Consensus 607 ~~~~~E~tqgaGAvA~l-~i~~~~~~~~----s~d~~Df---~Rp~~~~~~-~~~~-g~~s~~~y~~~~~~~~a~~~~-- 674 (945)
+..-..-|.||.|++ .=.+.+.+.. -.|-..+ +.|.+.... .... ..+......+=++ .|....
T Consensus 152 --R~t~vlFgDGAgAvvl~~~~~~~~i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk--~av~~~~~ 227 (323)
T COG0332 152 --RDTCVLFGDGAGAVVLEATEDDNGILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFK--FAVRAMPK 227 (323)
T ss_pred --ccceEEEcCCceEEEEecCCCCcCeeeeeeeccccCCCeeeccCCCCccccccccccceeeccHHHHH--HHHHHHHH
Confidence 223344588888876 1111111111 1111111 111100001 0000 0111111111111 011111
Q ss_pred --h-hcccccCCcchHHHHHHhCCCccchHHHHHHhhhccccccchhhHHHhhhcchHHHHhhhchhhhhccccCcccch
Q psy11265 675 --K-NLEDTYFNRDIEQYFMSHNRTEYEGAEAFAHIKNLEDTYFNRDIEQYFMSHSKQSFERLTKPGLYLANLIGNMYTP 751 (945)
Q Consensus 675 --~-~~~~~~~~~~~~~~~~~H~p~~~m~~~a~~~l~~~e~~~~~~~~~~~~~~~~~~~~~~kv~psl~~~~~vGN~YTa 751 (945)
+ .++......+..||++.|++..++-....+.+. .+ ..|+-.. -.+.||+.+|
T Consensus 228 ~~~~~L~~~~l~~~dId~~vpHQan~ri~~~i~~~l~-----------------~~----~~k~~~~---~~~yGNtsaA 283 (323)
T COG0332 228 AIEEVLEKAGLTPEDIDWFVPHQANLRIIEAIAKKLG-----------------IP----EEKVVVT---VDKYGNTSAA 283 (323)
T ss_pred HHHHHHHHcCCCHHHCCEEccccccHHHHHHHHHHcC-----------------CC----HHHHhhH---HHHhcccccc
Confidence 1 133334455556777888777555433333331 11 1223322 2789999999
Q ss_pred hHHHHHHHHhccCCccccCCCcEEEEEecCCCcc
Q psy11265 752 SLYGCLVSLLIQTPWERLQGMSRIGLFSYGSDNI 785 (945)
Q Consensus 752 Slyl~L~SlL~~~~~~~L~G~~rI~l~s~GsG~~ 785 (945)
|+.++|..++.+...+ +| ++|+|..||.|..
T Consensus 284 siplaL~~~~~~g~ik--~G-d~ill~~fG~Glt 314 (323)
T COG0332 284 SIPLALDEALREGRIK--PG-DLVLLEAFGGGLT 314 (323)
T ss_pred hHHHHHHHHhhhCCCC--CC-CEEEEEeecCcce
Confidence 9999999999987544 89 9999999999853
No 56
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=98.71 E-value=2.2e-08 Score=111.69 Aligned_cols=141 Identities=16% Similarity=0.149 Sum_probs=106.9
Q ss_pred cccceeeeeeecCCccccHHHHHhhcCCCcccchhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhccccccc
Q psy11265 7 ENVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVE 86 (945)
Q Consensus 7 ~~VGI~ai~~y~p~~yvd~~~L~~~~gv~~~Kyt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~ 86 (945)
|.|||.+|..|+|+.+++++++++..+.+..+.....|..+..++.+.|+...||+.|++++|++.+++|++|+.+ .++
T Consensus 1 ~~~~I~~i~~~~P~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~Id~~-i~~ 79 (318)
T TIGR00747 1 MYAGILGTGSYLPEKVLTNADLEKMVDTSDEWIVTRTGIKERRIAADDETSSTMGFEAAKRAIENAGISKDDIDLI-IVA 79 (318)
T ss_pred CCCEEEEEEEECCCceecHHHHHHhcCCchHHeecccCceEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEE
Confidence 4699999999999999999999999887766555557777888999999999999999999999999999999988 676
Q ss_pred CCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 87 SPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 87 Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
+...- ...+. ........++..+ + ..+++.++|.+++.| |..|..+|+ ++ ....+|| ++|
T Consensus 80 ~~~~~-~~~~~----~a~~l~~~lGl~~-~--------~~~~v~~~C~s~~~a-l~~A~~~i~--~g--~~~~~Lvv~~e 140 (318)
T TIGR00747 80 TTTPD-HAFPS----AACMVQAYLGIKG-I--------PAFDLSAACAGFIYA-LSVAKQYIE--SG--KYKTVLVVGAE 140 (318)
T ss_pred CCCCC-CCCCh----HHHHHHHHhCCCC-C--------cEeehhhhhHHHHHH-HHHHHHHHH--cC--CCCEEEEEEeh
Confidence 65110 00010 1112223344432 2 345777899999999 888999986 32 4578888 888
Q ss_pred cc
Q psy11265 166 SD 167 (945)
Q Consensus 166 ia 167 (945)
..
T Consensus 141 ~~ 142 (318)
T TIGR00747 141 KL 142 (318)
T ss_pred hh
Confidence 64
No 57
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=98.67 E-value=2.4e-08 Score=114.57 Aligned_cols=140 Identities=13% Similarity=0.093 Sum_probs=110.7
Q ss_pred CcccceeeeeeecCCccccHHHHHhhcCCCcccchhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhcccccc
Q psy11265 6 PENVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQV 85 (945)
Q Consensus 6 ~~~VGI~ai~~y~p~~yvd~~~L~~~~gv~~~Kyt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v 85 (945)
+++|+|.++..|.|...|+.+|+++..+.++.+.....|..+..++.+.|+...||+.|++++|++.++++++|+.| ++
T Consensus 45 ~~~~~I~g~g~~lP~~~v~n~el~~~~~~~~~~i~~~tGi~~R~~~~~~~~~~~La~~Aa~~aL~~agi~~~dId~l-i~ 123 (379)
T PLN02326 45 GSGSKLVGCGSAVPKLLITNDDLSKLVDTSDEWIATRTGIRNRRVLSGDETLTSLAVEAAKKALEMAGVDPEDVDLV-LL 123 (379)
T ss_pred cCCcEEEEEEEECCCceecHHHHHHhcCCchhheecccCcceEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EE
Confidence 46799999999999999999999999887777777778888899999999999999999999999999999999999 77
Q ss_pred cCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ec
Q psy11265 86 ESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TK 164 (945)
Q Consensus 86 ~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-as 164 (945)
+|.... ..| .+ .......|+.. ++ ..+++.++|.|++.| |..|..+|+ + ++...+|| ++
T Consensus 124 ~s~~~~--~~~-~~---a~~v~~~LG~~-~~--------~~~dv~~~Ca~~~~a-L~~A~~~l~--~--g~~~~vLVv~~ 183 (379)
T PLN02326 124 CTSSPD--DLF-GS---APQVQAALGCT-NA--------LAFDLTAACSGFVLG-LVTAARFIR--G--GGYKNVLVIGA 183 (379)
T ss_pred EeCCCC--ccC-cH---HHHHHHHhCCC-CC--------ceeeccccchHHHHH-HHHHHHHHH--c--CCCCEEEEEEe
Confidence 765110 112 11 11122444433 34 457888999999999 888888886 3 34678888 88
Q ss_pred cc
Q psy11265 165 LS 166 (945)
Q Consensus 165 di 166 (945)
|.
T Consensus 184 e~ 185 (379)
T PLN02326 184 DA 185 (379)
T ss_pred ch
Confidence 86
No 58
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=98.67 E-value=1.9e-08 Score=114.38 Aligned_cols=250 Identities=13% Similarity=0.072 Sum_probs=143.5
Q ss_pred ccccccccceeeccccccchhHh-hhhcCcC---cccccccccccccccCCCcchhhhhhhc------------------
Q psy11265 491 PENVGILGIEFYFPSQYVDQTEL-EKHDQVS---AGKYTIGLGQAKMGFCSDLEDINSICLT------------------ 548 (945)
Q Consensus 491 ~~~vGI~ai~~Y~P~~~l~~~el-~~~~g~d---~gKy~~Glgq~~msv~~~~EDivTma~~------------------ 548 (945)
.++++|.+++.|+|..+++.+++ ++..+-+ ..|.....|..++.++.++|++.+||+.
T Consensus 5 ~~~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ 84 (353)
T PRK12880 5 FDKAKISGICVSVPEHKICIDDELESVFSNDIKTLKRMKKVIGLNTRYICDENTCVSDLGKHAANTLLQGLNIDKNSLDA 84 (353)
T ss_pred ccccEEEEEEEECCCeEecHHHHHHHhcCcchhhhhhhhhccCceEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 45789999999999999998864 4333221 2346677999999999999999999998
Q ss_pred ----------------------cCcchhhHH--H-HHHHHhHHHHHHHHhCccccCCCcceeeecCCcceEEEec--ccc
Q psy11265 549 ----------------------LSIQCYLGA--L-DACYQGYRAKAAKLTGKELSLGDFDAVLFHTPYCKLVQKS--LAR 601 (945)
Q Consensus 549 ----------------------Lsl~~~~~~--l-daCy~~~~~~~al~~a~~~~l~~~~~v~~~~p~~kLV~as--~ar 601 (945)
|+++....+ + .+|.++. .+|+.|. +|+..+... .||+.+ .++
T Consensus 85 lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~~~C~g~~---~aL~~A~-------~~i~~~~~~-~LVv~~e~~S~ 153 (353)
T PRK12880 85 LIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLGQACAGYL---YGLFVAH-------SLIQSGLGK-ILLICGDTLSK 153 (353)
T ss_pred EEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehhhhhHHHH---HHHHHHH-------HHHHcCCCC-EEEEEehhhhc
Confidence 677543333 3 5999988 4667666 777765544 777555 444
Q ss_pred cc-ccccccccCcccccchhhhH--hhh------cccC-cccccccc----cccccccc----cc-----------cccc
Q psy11265 602 LA-YNDFISATDRSQYEGAEAFA--HIK------NLED-TYFNRDIE----QYFMSHNL----YR-----------TRLA 652 (945)
Q Consensus 602 y~-~~~~~~~~E~tqgaGAvA~l--~i~------~~~~-~~~s~d~~----Df~Rp~~~----~~-----------~~~~ 652 (945)
.- +.+ .......|+||+|++ .-. .+.+ +.+...+. .+-+|... .. .-..
T Consensus 154 ~~~~~d--~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (353)
T PRK12880 154 FIHPKN--MNLAPIFGDGVSATLIEKTDFNEAFFELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYM 231 (353)
T ss_pred cCCccc--CCceeeecccceEEEEEecCCCCceEEEEecCCCCCeEEecCCCcCCCccccccccccccccccccCceEEE
Confidence 42 222 122456799999976 110 0000 11111110 00001000 00 0012
Q ss_pred ccccchhchHHhhhhhhHHHhhhhcccccCCcchHHHHHHhCCCccchHHHHHHhhhccccccchhhHHHhhhcchHHHH
Q psy11265 653 YNDFISATDRTEYEGAEAFAHIKNLEDTYFNRDIEQYFMSHNRTEYEGAEAFAHIKNLEDTYFNRDIEQYFMSHSKQSFE 732 (945)
Q Consensus 653 ~g~~s~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~H~p~~~m~~~a~~~l~~~e~~~~~~~~~~~~~~~~~~~~~ 732 (945)
+|......+.+.+. .++..+ +.......+..|+|++|++-.++...-.+.+ +++.
T Consensus 232 ~g~~v~~~~~~~~~--~~i~~~--L~~~gl~~~did~~v~HQ~~~~i~~~i~~~L-----------------gl~~---- 286 (353)
T PRK12880 232 DGANIFNMALECEP--KSFKEI--LEFSKVDEKDIAFHLFHQSNAYLVDCIKEEL-----------------KLND---- 286 (353)
T ss_pred cCHHHHHHHHHHHH--HHHHHH--HHHcCCCHHHCCEEEECCCCHHHHHHHHHHh-----------------CCCH----
Confidence 23222222222221 233333 1222344455678999988855543322222 2222
Q ss_pred hhhchhhhhccccCcccchhHHHHHHHHhccCCccccCCCcEEEEEecCCCcccc
Q psy11265 733 RLTKPGLYLANLIGNMYTPSLYGCLVSLLIQTPWERLQGMSRIGLFSYGSDNIKA 787 (945)
Q Consensus 733 ~kv~psl~~~~~vGN~YTaSlyl~L~SlL~~~~~~~L~G~~rI~l~s~GsG~~~~ 787 (945)
.|+ +. .+-++.||+-++|+.+.|.-++... + -+++|.++|-|..-.
T Consensus 287 ek~-~~-~~l~~~GNtssasip~~L~~~~~~~------~-~~~ll~~~G~G~s~g 332 (353)
T PRK12880 287 DKV-PN-FIMEKYANLSACSLPALLCELDTPK------E-FKASLSAFGAGLSWG 332 (353)
T ss_pred HHh-hh-hhHHhhCCHHHHHHHHHHHHHHHcC------C-cEEEEEEEchhhhhe
Confidence 223 11 2237899999999999999988653 2 468999999986543
No 59
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=98.66 E-value=3.4e-08 Score=110.04 Aligned_cols=139 Identities=24% Similarity=0.267 Sum_probs=102.8
Q ss_pred ccceeeeeeecCCccccHHHHHhhcCCCcccchhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhcccccccC
Q psy11265 8 NVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVES 87 (945)
Q Consensus 8 ~VGI~ai~~y~p~~yvd~~~L~~~~gv~~~Kyt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~T 87 (945)
.|||.+|..|+|+.+|+.++|++..+.+.-+..+|+.|.. |..+.++...|+..|++++|++.++++++|+.| .+++
T Consensus 1 ~v~I~~i~~~lP~~~v~~~~~~~~~~~~~~~~~~gi~~r~--~~~~~~~~~~l~~~a~~~aL~~ag~~~~~Id~l-i~~~ 77 (324)
T cd00827 1 DVGIEAIGAYLPRYRVDNEELAEGLGVDPGKYTTGIGQRH--MAGDDEDVPTMAVEAARRALERAGIDPDDIGLL-IVAT 77 (324)
T ss_pred CccEEEEEecCCceeecHHHHHHHhCCCcceeeeecceeE--ecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEc
Confidence 4899999999999999999999999877555555555555 555689999999999999999999999999998 7777
Q ss_pred CcccccccccccchhhhhhcccccccCccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 88 PEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 88 e~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
+.- .+. ...........++.. ++ ..+++.++|.|+..| |..|..+|+ + ++...+|| ++|.
T Consensus 78 ~~~----~~~-~~~~~~~i~~~lg~~-~~--------~~~~v~~~C~s~~~a-l~~A~~~i~--~--g~~~~vlvv~~e~ 138 (324)
T cd00827 78 ESP----IDK-GKSAATYLAELLGLT-NA--------EAFDLKQACYGGTAA-LQLAANLVE--S--GPWRYALVVASDI 138 (324)
T ss_pred CCC----CCC-CccHHHHHHHHcCCC-CC--------ceeehhhhhHHHHHH-HHHHHHHHH--c--CCCCEEEEEEEHH
Confidence 610 000 000111112333332 33 457888999999999 888999986 3 24578888 8887
Q ss_pred cc
Q psy11265 167 DV 168 (945)
Q Consensus 167 a~ 168 (945)
..
T Consensus 139 ~~ 140 (324)
T cd00827 139 AS 140 (324)
T ss_pred hh
Confidence 54
No 60
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=98.57 E-value=2.9e-07 Score=102.66 Aligned_cols=140 Identities=16% Similarity=0.166 Sum_probs=103.4
Q ss_pred cccceeeeeeecCCccccHHHHHhhcCCCcccchhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhccccccc
Q psy11265 7 ENVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVE 86 (945)
Q Consensus 7 ~~VGI~ai~~y~p~~yvd~~~L~~~~gv~~~Kyt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~ 86 (945)
++|+|.+|..|+|+..+++++++++.|.+..+..-..|..+..++.+.++...|++.|++++|++.++++++|+.+ .++
T Consensus 2 ~~v~I~ai~~~lP~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~id~v-i~~ 80 (319)
T PRK09352 2 MYAKILGTGSYLPERVVTNDDLEKMVDTSDEWIVTRTGIKERRIAAPDETTSDLATEAAKKALEAAGIDPEDIDLI-IVA 80 (319)
T ss_pred CceEEEEEEEECCCeEEcHHHHHHHcCCCHHHhhhhcCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEE
Confidence 5799999999999999999999999887655543345666667888899999999999999999999999999988 677
Q ss_pred CCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 87 SPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 87 Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
|.... ..+. + ........++.. ++ ..+.+.++|.+++.| |..|..+|+ + ++...+|| ++|
T Consensus 81 ~~~~~--~~~~-~--~~~~i~~~lG~~-~~--------~~~~v~~~Casg~~a-l~~A~~~i~--~--g~~~~vLvv~~e 141 (319)
T PRK09352 81 TTTPD--YAFP-S--TACLVQARLGAK-NA--------AAFDLSAACSGFVYA-LSTADQFIR--S--GAYKNVLVIGAE 141 (319)
T ss_pred cCCCC--CCCc-h--HHHHHHHHhCCC-CC--------cEeeccccchhHHHH-HHHHHHHHH--c--CCCCEEEEEEeh
Confidence 66110 0011 0 011112334432 22 345667899999999 888888886 3 35688888 888
Q ss_pred c
Q psy11265 166 S 166 (945)
Q Consensus 166 i 166 (945)
.
T Consensus 142 ~ 142 (319)
T PRK09352 142 K 142 (319)
T ss_pred h
Confidence 6
No 61
>PLN03169 chalcone synthase family protein; Provisional
Probab=98.31 E-value=5.6e-07 Score=103.87 Aligned_cols=262 Identities=13% Similarity=0.046 Sum_probs=139.8
Q ss_pred CCccccccccceeeccccccchhHhhhh-c---C-cCcc---c---ccccccccccccCC--------------------
Q psy11265 489 QWPENVGILGIEFYFPSQYVDQTELEKH-D---Q-VSAG---K---YTIGLGQAKMGFCS-------------------- 537 (945)
Q Consensus 489 ~~~~~vGI~ai~~Y~P~~~l~~~el~~~-~---g-~d~g---K---y~~Glgq~~msv~~-------------------- 537 (945)
..|..+.|.+|+.|+|...++++++.+. . . .++. + .....|.+++.++.
T Consensus 17 ~~~~~~~I~gigt~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~ 96 (391)
T PLN03169 17 ANPGKATILALGKAFPSQLVPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTPTIK 96 (391)
T ss_pred CCCCCeEEEEEEeeCCCeecCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCCCCHH
Confidence 3456788999999999999999998874 1 1 1121 1 22224555555553
Q ss_pred -----Ccchhhhhhhc---------------------------------------cCcchhh-HHH---HHHHHhHHHHH
Q psy11265 538 -----DLEDINSICLT---------------------------------------LSIQCYL-GAL---DACYQGYRAKA 569 (945)
Q Consensus 538 -----~~EDivTma~~---------------------------------------Lsl~~~~-~~l---daCy~~~~~~~ 569 (945)
..|.+.+||+. |+++..+ ++. .+|+++. .
T Consensus 97 ~r~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g~~---~ 173 (391)
T PLN03169 97 QRLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGV---A 173 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeecccChhHHHH---H
Confidence 26789999988 6665433 223 5999888 4
Q ss_pred HHHhCccccCCCcceeeecCCcceEEEec-cccccccc--cc----cccCcccccchhhhH-hhhcc---cCc--ccccc
Q psy11265 570 AKLTGKELSLGDFDAVLFHTPYCKLVQKS-LARLAYND--FI----SATDRSQYEGAEAFA-HIKNL---EDT--YFNRD 636 (945)
Q Consensus 570 al~~a~~~~l~~~~~v~~~~p~~kLV~as-~ary~~~~--~~----~~~E~tqgaGAvA~l-~i~~~---~~~--~~s~d 636 (945)
+|..|. +|+..++..++||+.+ +..+.+.. .. .......|+||+|++ .=.+. ..+ ....+
T Consensus 174 aL~~A~-------~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~ 246 (391)
T PLN03169 174 GLRVAK-------DIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTA 246 (391)
T ss_pred HHHHHH-------HHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEEee
Confidence 777776 7777665556788776 53332221 00 012345688998876 10000 000 00001
Q ss_pred ccccccccccc---------cccccccccchhchHHhhhhhhHHHhhhhcccccCCcchHH--HHHHhCCCccchHHHHH
Q psy11265 637 IEQYFMSHNLY---------RTRLAYNDFISATDRTEYEGAEAFAHIKNLEDTYFNRDIEQ--YFMSHNRTEYEGAEAFA 705 (945)
Q Consensus 637 ~~Df~Rp~~~~---------~~~~~~g~~s~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~--~~~~H~p~~~m~~~a~~ 705 (945)
..++. |.... ......|...-....+.+. ..++.+ ++......+..| +|++|+...++- +++.
T Consensus 247 ~~~~i-p~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~--~~i~~~--L~~~gl~~~did~~~~v~Hq~n~~il-~~v~ 320 (391)
T PLN03169 247 IQQFL-PGTEKTIDGRLTEEGINFKLGRELPQKIEDNIE--GFCKKL--MKKAGLVEKDYNDLFWAVHPGGPAIL-NRLE 320 (391)
T ss_pred eeeEc-CCCccccCceecCCceEEEECcHHHHHHHHHHH--HHHHHH--HHHcCCCCCCCCcceEEecCCCHHHH-HHHH
Confidence 11111 20000 0001112211111111111 122233 222223222233 688997774443 2222
Q ss_pred HhhhccccccchhhHHHhhhcchHHHHhhhchhhhhccccCcccchhHHHHHHHHhccCCcc-ccCCCcEEEEEecCCCc
Q psy11265 706 HIKNLEDTYFNRDIEQYFMSHSKQSFERLTKPGLYLANLIGNMYTPSLYGCLVSLLIQTPWE-RLQGMSRIGLFSYGSDN 784 (945)
Q Consensus 706 ~l~~~e~~~~~~~~~~~~~~~~~~~~~~kv~psl~~~~~vGN~YTaSlyl~L~SlL~~~~~~-~L~G~~rI~l~s~GsG~ 784 (945)
..| +++ ..|+..|-..-++.|||-++|+.+.|-.+++..... .-+| ++++|++||.|.
T Consensus 321 ~~L----------------gl~----~ek~~~s~~~l~~~GNtsSasip~~L~~~~~~~~~~~~~~g-d~~ll~afG~G~ 379 (391)
T PLN03169 321 KKL----------------KLA----PEKLECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEEDE-EWGLILAFGPGI 379 (391)
T ss_pred HHc----------------CCC----HHHHHHHHHHHHHhCCchHhHHHHHHHHHHHhhcccCCCCC-cEEEEEEEcccH
Confidence 211 222 244555534448999999999999999888653211 1268 999999999997
Q ss_pred ccc
Q psy11265 785 IKA 787 (945)
Q Consensus 785 ~~~ 787 (945)
...
T Consensus 380 s~~ 382 (391)
T PLN03169 380 TFE 382 (391)
T ss_pred hHH
Confidence 543
No 62
>PLN03169 chalcone synthase family protein; Provisional
Probab=98.29 E-value=6.8e-07 Score=103.18 Aligned_cols=143 Identities=16% Similarity=0.111 Sum_probs=101.0
Q ss_pred CcccceeeeeeecCCccccHHHHHhh-cC----CCcc---c---ch--hccCCccccCCC--------------------
Q psy11265 6 PENVGILGIEFYFPSQYVDQTELEKH-DQ----VSAG---K---YT--IGLGQAKMGFCS-------------------- 52 (945)
Q Consensus 6 ~~~VGI~ai~~y~p~~yvd~~~L~~~-~g----v~~~---K---yt--~GLGq~~m~~~~-------------------- 52 (945)
|.++-|.+|..|+|++.|+|+|+.++ .. .++. + .- .|+-+..++...
T Consensus 19 ~~~~~I~gigt~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~r 98 (391)
T PLN03169 19 PGKATILALGKAFPSQLVPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTPTIKQR 98 (391)
T ss_pred CCCeEEEEEEeeCCCeecCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCCCCHHHH
Confidence 56689999999999999999999985 21 1221 1 11 355555544322
Q ss_pred ---CCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhh
Q psy11265 53 ---DLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDK 129 (945)
Q Consensus 53 ---~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~ 129 (945)
..|....||..|++++|++.++++++|+.| ++.|.. .+..-+ ........|+++..+ .+++++
T Consensus 99 ~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~l-I~~t~t-----~~~~P~-~a~~l~~~LGl~~~~-------~~~~d~ 164 (391)
T PLN03169 99 LDIANEAVTQMAVEASLACIKEWGRPVSDITHL-VYVSSS-----EARLPG-GDLYLAKQLGLSPDV-------QRVMLY 164 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEE-EEECcC-----CCCCCc-HHHHHHHHhCcCCcc-------eeeecc
Confidence 278899999999999999999999999998 777771 111111 111222445543322 356899
Q ss_pred hhhhhhHHHHHHhhccceEEeecccCCCcceee-ecccc
Q psy11265 130 YSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLSD 167 (945)
Q Consensus 130 k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdia 167 (945)
..+|.|++.| |..|..+++ + ++.+++|| ++|..
T Consensus 165 ~~gC~g~~~a-L~~A~~~~~--~--~~~~~vLvv~~e~~ 198 (391)
T PLN03169 165 FLGCSGGVAG-LRVAKDIAE--N--NPGSRVLLTTSETT 198 (391)
T ss_pred cChhHHHHHH-HHHHHHHHH--h--CCCCeEEEEEEEcC
Confidence 9999999999 999999996 3 36789998 98874
No 63
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=98.29 E-value=1.2e-06 Score=98.08 Aligned_cols=140 Identities=19% Similarity=0.194 Sum_probs=113.2
Q ss_pred cccceeeeeeecCCccccHHHHHhhcCCCcccchhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhccccccc
Q psy11265 7 ENVGILGIEFYFPSQYVDQTELEKHDQVSAGKYTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVE 86 (945)
Q Consensus 7 ~~VGI~ai~~y~p~~yvd~~~L~~~~gv~~~Kyt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~ 86 (945)
++++|.++.-|.|..-|.-.||++.-+.+..-...=.|-.+..++.+.|..-+||..||+++|++.+++|++|+.| +++
T Consensus 2 ~~a~i~g~G~~lP~~~vtn~d~e~~~~tsdewI~~rtGir~R~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlI-I~a 80 (323)
T COG0332 2 MNAKILGIGSYLPERVVTNADLEKRVDTSDEWIETRTGIRERRIAADDETTSDLAVEAARKALEDAGISPDDIDLI-IVA 80 (323)
T ss_pred CcceEEEEEeecCCcccChHHHHhccCCCcceeeeecCCceeeecCCCccHHHHHHHHHHHHHHHcCCCHHHCCEE-EEE
Confidence 5789999999999999999999988888887776667888889999999999999999999999999999999999 888
Q ss_pred CCccccccccccc-chhhhhhcccccccCccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ec
Q psy11265 87 SPEEYEQESWQLT-EAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TK 164 (945)
Q Consensus 87 Te~~~~~s~wd~s-~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-as 164 (945)
|- +. |.. ..........|+..+ + -++++..||-|.+.| |..|-.+|+ ++ .-+++|| ++
T Consensus 81 T~-----tp-d~~~Ps~A~~vq~~LG~~~-~--------~afDl~aaCsgf~ya-L~~A~~~i~--sG--~~k~vLVVg~ 140 (323)
T COG0332 81 TS-----TP-DHLFPSTACLVQARLGLGG-A--------PAFDLQAACSGFLYA-LSVADGLIR--SG--GYKNVLVVGA 140 (323)
T ss_pred cC-----Cc-ccCCChHHHHHHHHhCCCC-c--------ceeechhhhHHHHHH-HHHHHHHHH--cC--CCCEEEEEeh
Confidence 87 11 111 111111124465544 4 678999999999999 999999997 43 4577999 98
Q ss_pred ccc
Q psy11265 165 LSD 167 (945)
Q Consensus 165 dia 167 (945)
|+-
T Consensus 141 e~~ 143 (323)
T COG0332 141 ETL 143 (323)
T ss_pred hHh
Confidence 885
No 64
>PLN03171 chalcone synthase-like protein; Provisional
Probab=98.18 E-value=2e-06 Score=99.59 Aligned_cols=140 Identities=13% Similarity=0.102 Sum_probs=99.8
Q ss_pred cceeeeeeecCCccccHHHHHhhc-CC--Ccc---------cchhccCCccccCCCCC----------------------
Q psy11265 9 VGILGIEFYFPSQYVDQTELEKHD-QV--SAG---------KYTIGLGQAKMGFCSDL---------------------- 54 (945)
Q Consensus 9 VGI~ai~~y~p~~yvd~~~L~~~~-gv--~~~---------Kyt~GLGq~~m~~~~~~---------------------- 54 (945)
+-|.+|..|+|...|+|++++++. .. +.+ +...-.|-++..++.+.
T Consensus 23 ~~I~gigt~~P~~~v~n~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 102 (399)
T PLN03171 23 AAVLAIGTANPANCVPQDEFPDFYFRATKSDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPSLDARLD 102 (399)
T ss_pred cEEEEEEeeCCCcccCHHHHHHHHHHHhcccccHHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCCHHHHHH
Confidence 559999999999999999999872 21 111 22233466666666554
Q ss_pred ---ccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhh
Q psy11265 55 ---EDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYS 131 (945)
Q Consensus 55 ---EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~ 131 (945)
|....||+.|++++|++.++++++|+.| +++|... +...-........|+.... ..+.++..+
T Consensus 103 ~~~~~a~~la~~Aa~~aL~~ag~~~~dId~l-i~~t~t~------~~~P~~a~~v~~~LGl~~~-------~~~~~~~~~ 168 (399)
T PLN03171 103 IAADAVPELAAEAAKKAIAEWGRPAADITHL-VVTTNSG------AHIPGVDFRLVPLLGLRPS-------VRRTMLHLN 168 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEcCCC------CCCCchHHHHHHHhCCCcc-------cceeeccCC
Confidence 5899999999999999999999999999 8888821 1111111122244554322 224567888
Q ss_pred hhhhHHHHHHhhccceEEeecccCCCcceee-ecccc
Q psy11265 132 TALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLSD 167 (945)
Q Consensus 132 acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdia 167 (945)
+|.|++.+ |..|..+++ + ++.+++|| ++|+.
T Consensus 169 gC~g~~~a-L~~A~~li~--~--~~~~~vLVv~~e~~ 200 (399)
T PLN03171 169 GCFAGAAA-LRLAKDLAE--N--NRGARVLVVAAEIT 200 (399)
T ss_pred ccHHHHHH-HHHHHHHHH--h--CCCCeEEEEEEecc
Confidence 99999999 999999886 2 46789998 98873
No 65
>TIGR00115 tig trigger factor. Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome.
Probab=98.18 E-value=8.3e-06 Score=94.68 Aligned_cols=87 Identities=16% Similarity=0.202 Sum_probs=73.7
Q ss_pred CCCCCCEEEEEEEEEEecCCCcEEecCCCCCcCeEEEccccchhhhHHHHHhcCCCCcEEEEEecCCccccCCccchhhH
Q psy11265 288 INSICLTVHFHFVTQLCDSDNTILDDSRKLGKPMQLVLGKKFKLEVWETLVKHMSIGEISKFVCDKSLVSAYPFVSKTLR 367 (945)
Q Consensus 288 ~P~~g~~V~VhY~g~l~~~dGtvfDsS~~~g~P~~f~lG~g~vI~G~e~~v~~M~~GE~a~~~i~pe~~~aYG~~~~~lr 367 (945)
.+..|+.|+|+|+|+. +|+.|+++. .+|+.|.+|.+.+++||+.+|.+|++|++..|.++... .|+.
T Consensus 146 ~~~~gD~V~v~~~~~~---dg~~~~~~~--~~~~~~~lg~~~~~~~~ee~L~G~k~Gd~~~~~v~~p~--~~~~------ 212 (408)
T TIGR00115 146 AAEKGDRVTIDFEGFI---DGEAFEGGK--AENFSLELGSGQFIPGFEEQLVGMKAGEEKEIKVTFPE--DYHA------ 212 (408)
T ss_pred ccCCCCEEEEEEEEEE---CCEECcCCC--CCCeEEEECCCCcchhHHHHhCCCCCCCeeEEEecCcc--ccCc------
Confidence 3577999999999987 899999874 47999999999999999999999999999999997654 4443
Q ss_pred hhhcccCCCCcccccccccccccccccccccccCCCCcEEEEEEEEeeeCC
Q psy11265 368 DAAKHSADGTEQSKRHCCGVQMHTGYEDLNELLKKSQDLTFTIELLQVESP 418 (945)
Q Consensus 368 ~i~~~g~~G~~~~~~~~~G~~m~~G~~~~~~~ipp~s~L~FeVELl~v~~p 418 (945)
. --+|.++.|+|+|.+|.++
T Consensus 213 -------~------------------------~~~gk~~~f~v~i~~I~~~ 232 (408)
T TIGR00115 213 -------E------------------------ELAGKEATFKVTVKEVKEK 232 (408)
T ss_pred -------c------------------------cCCCCeEEEEEEEEEeccC
Confidence 0 1257899999999999873
No 66
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=98.15 E-value=2.2e-06 Score=98.49 Aligned_cols=141 Identities=11% Similarity=0.118 Sum_probs=99.2
Q ss_pred cccceeeeeeecCCccccHHHHHhhcCCCcccc---------hhccCCccccCCCC---CccHHHHHHHHHHHHHHhccC
Q psy11265 7 ENVGILGIEFYFPSQYVDQTELEKHDQVSAGKY---------TIGLGQAKMGFCSD---LEDINSICLTVVSNLMKRYEL 74 (945)
Q Consensus 7 ~~VGI~ai~~y~p~~yvd~~~L~~~~gv~~~Ky---------t~GLGq~~m~~~~~---~EDivsla~~a~~~Ll~~~~~ 74 (945)
|+|+|.+|..|+|...|++++++++-+..+++. ..|+-+..++...+ .+....||..|++++|++.++
T Consensus 1 ~~v~I~gig~~lP~~~v~n~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~La~~A~~~aL~~agi 80 (378)
T PRK06816 1 MNVYITSTGAFLPGEPVSNDEMEAYLGLINGKPSRARRIILRNNGIKTRHYALDPEGRPTHSNAQMAAEAIRDLLDDAGF 80 (378)
T ss_pred CCeEEEeeeecCCCCccCHHHHHHHHhhccCCcHHHHHHHHHhCCCceEEEEECCCCCCCCCHHHHHHHHHHHHHHHcCC
Confidence 579999999999999999999998876544322 23666666554432 357899999999999999999
Q ss_pred CHHhhcccccccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeeccc
Q psy11265 75 DYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAA 154 (945)
Q Consensus 75 ~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~ 154 (945)
+|++|+.| +++|.. ...+..+ ........|+.. ++ ..+++..+|.|+..| |..|..+|+ +
T Consensus 81 ~~~dId~l-i~~s~~---~~~~~p~--~a~~v~~~Lgl~-~~--------~~~~v~~~Cas~~~a-l~~A~~~i~--s-- 140 (378)
T PRK06816 81 SLGDIELL-ACGTSQ---PDQLMPG--HASMVHGELGAP-PI--------EVVSSAGVCAAGMMA-LKYAYLSVK--A-- 140 (378)
T ss_pred CHHHCCEE-EEEECC---CCcCChH--HHHHHHhhCCCC-CC--------ceeeecCcCHHHHHH-HHHHHHHHH--C--
Confidence 99999998 777651 0000000 001112234332 23 456788899999999 888888886 3
Q ss_pred CCCcceee-ecccc
Q psy11265 155 VDTLKTLV-TKLSD 167 (945)
Q Consensus 155 ~~~~~~LV-asdia 167 (945)
++...+|| ++|..
T Consensus 141 g~~~~vLvv~~E~~ 154 (378)
T PRK06816 141 GESRNAVATASELA 154 (378)
T ss_pred CCCCEEEEEeEccc
Confidence 35678888 88875
No 67
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=98.14 E-value=1.9e-06 Score=98.28 Aligned_cols=139 Identities=14% Similarity=0.055 Sum_probs=98.4
Q ss_pred cceeeeeeecCCccccHHHHHhhcCC-Cc-----------ccch--hccCCccccCCC-CC-------------------
Q psy11265 9 VGILGIEFYFPSQYVDQTELEKHDQV-SA-----------GKYT--IGLGQAKMGFCS-DL------------------- 54 (945)
Q Consensus 9 VGI~ai~~y~p~~yvd~~~L~~~~gv-~~-----------~Kyt--~GLGq~~m~~~~-~~------------------- 54 (945)
+-|.++..|+|+..|++++++++-+- .+ .+.. .|+-+..+.... +.
T Consensus 2 ~~I~~~~~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (361)
T cd00831 2 ATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERNDIA 81 (361)
T ss_pred cEEEEEEEeCCCCcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcchhhH
Confidence 56999999999999999999997532 11 2222 344444444431 11
Q ss_pred -ccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhh-hh
Q psy11265 55 -EDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKY-ST 132 (945)
Q Consensus 55 -EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k-~a 132 (945)
|+...||..|++++|++.+++|++|+.| +++|. +.+. .....+.....|+...++ ..+++. .+
T Consensus 82 ~~~~~~la~~Aa~~aL~~a~~~~~~Id~l-i~~s~-----~~~~-~P~~a~~i~~~lgl~~~~--------~~~dv~~~~ 146 (361)
T cd00831 82 LEEARELAEEAARGALDEAGLRPSDIDHL-VVNTS-----TGNP-TPSLDAMLINRLGLRPDV--------KRYNLGGMG 146 (361)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEE-EEECC-----CCCC-CCCHHHHHHHHhCCCccc--------chhcccccc
Confidence 4899999999999999999999999999 77776 1111 111111222455655455 678998 79
Q ss_pred hhhHHHHHHhhccceEEeecccCCCcceee-ecccc
Q psy11265 133 ALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLSD 167 (945)
Q Consensus 133 cyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdia 167 (945)
|.|++.| |..|..+++ + ++.+++|| ++|..
T Consensus 147 C~~~~~a-l~~A~~~~~--~--~~~~~aLvv~~e~~ 177 (361)
T cd00831 147 CSAGAIA-LDLAKDLLE--A--NPGARVLVVSTELC 177 (361)
T ss_pred chhHHHH-HHHHHHHHH--H--CCCCEEEEEEeecc
Confidence 9999999 999999986 3 35688998 88864
No 68
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=98.10 E-value=3.1e-06 Score=96.99 Aligned_cols=80 Identities=8% Similarity=-0.078 Sum_probs=52.5
Q ss_pred cCCcchHHHHHHhCCCccchHHHHHHhhhccccccchhhHHHhhhcchHHHHhhhchhhhhccccCcccchhHHHHHHHH
Q psy11265 681 YFNRDIEQYFMSHNRTEYEGAEAFAHIKNLEDTYFNRDIEQYFMSHSKQSFERLTKPGLYLANLIGNMYTPSLYGCLVSL 760 (945)
Q Consensus 681 ~~~~~~~~~~~~H~p~~~m~~~a~~~l~~~e~~~~~~~~~~~~~~~~~~~~~~kv~psl~~~~~vGN~YTaSlyl~L~Sl 760 (945)
....+.-|||++|++-.++.....+.++ ....+ ..+. ..+-.+.||+.++|+++.|..+
T Consensus 285 gl~~~dId~~~~Hq~~~~~~d~~~~~ll----------------g~~~~--~~~~---~~~~~~~GNt~sasi~~~L~~~ 343 (372)
T PRK07515 285 GLTPADVKRFWLHQANINMNQLIGKKVL----------------GRDAT--PEEA---PVILDEYANTSSAGSIIAFHKH 343 (372)
T ss_pred CCCHHHCCEEEECCCCHHHHHHHHHHhc----------------cCCCC--hhhc---eEeHHhcCCchhhHHHHHHHHH
Confidence 3444555778999888776554444332 00000 0111 1134899999999999999998
Q ss_pred hccCCccccCCCcEEEEEecCCCccc
Q psy11265 761 LIQTPWERLQGMSRIGLFSYGSDNIK 786 (945)
Q Consensus 761 L~~~~~~~L~G~~rI~l~s~GsG~~~ 786 (945)
+... .+| ++|+|+++|.|...
T Consensus 344 ~~~~----~~G-d~vll~~~G~G~~~ 364 (372)
T PRK07515 344 SDDL----AAG-DLGVICSFGAGYSI 364 (372)
T ss_pred hccC----CCC-CEEEEEEecccHHH
Confidence 6432 289 99999999999753
No 69
>PRK01490 tig trigger factor; Provisional
Probab=97.99 E-value=3.2e-05 Score=90.64 Aligned_cols=86 Identities=17% Similarity=0.206 Sum_probs=72.2
Q ss_pred CCCCCCEEEEEEEEEEecCCCcEEecCCCCCcCeEEEccccchhhhHHHHHhcCCCCcEEEEEecCCccccCCccchhhH
Q psy11265 288 INSICLTVHFHFVTQLCDSDNTILDDSRKLGKPMQLVLGKKFKLEVWETLVKHMSIGEISKFVCDKSLVSAYPFVSKTLR 367 (945)
Q Consensus 288 ~P~~g~~V~VhY~g~l~~~dGtvfDsS~~~g~P~~f~lG~g~vI~G~e~~v~~M~~GE~a~~~i~pe~~~aYG~~~~~lr 367 (945)
.+..|+.|+|+|+|+. +|+.|+++. .+++.|.+|.+.+++||+.+|.+|++|++..|.++... .|+.
T Consensus 157 ~~~~gD~V~vd~~~~~---~g~~~~~~~--~~~~~~~lg~~~~~~~fee~L~G~k~Ge~~~~~~~~p~--~~~~------ 223 (435)
T PRK01490 157 PAENGDRVTIDFVGSI---DGEEFEGGK--AEDFSLELGSGRFIPGFEEQLVGMKAGEEKTIDVTFPE--DYHA------ 223 (435)
T ss_pred cCCCCCEEEEEEEEEE---CCEECcCCC--CCceEEEEcCCCcchhHHHHhCCCCCCCeeEEEecCcc--cccc------
Confidence 3578999999999998 899999764 47899999999999999999999999999999886544 3443
Q ss_pred hhhcccCCCCcccccccccccccccccccccccCCCCcEEEEEEEEeeeC
Q psy11265 368 DAAKHSADGTEQSKRHCCGVQMHTGYEDLNELLKKSQDLTFTIELLQVES 417 (945)
Q Consensus 368 ~i~~~g~~G~~~~~~~~~G~~m~~G~~~~~~~ipp~s~L~FeVELl~v~~ 417 (945)
. --+|.++.|+|+|.+|..
T Consensus 224 -------~------------------------~lagk~~~f~v~v~~V~~ 242 (435)
T PRK01490 224 -------E------------------------DLAGKEATFKVTVKEVKE 242 (435)
T ss_pred -------c------------------------cCCCCeEEEEEEEEEecc
Confidence 0 124788999999999987
No 70
>PLN03171 chalcone synthase-like protein; Provisional
Probab=97.55 E-value=8.6e-05 Score=86.16 Aligned_cols=55 Identities=15% Similarity=0.060 Sum_probs=38.6
Q ss_pred hhhchhhhhccccCcccchhHHHHHHHHhccCCccccCC--CcEEEEEecCCCcccc
Q psy11265 733 RLTKPGLYLANLIGNMYTPSLYGCLVSLLIQTPWERLQG--MSRIGLFSYGSDNIKA 787 (945)
Q Consensus 733 ~kv~psl~~~~~vGN~YTaSlyl~L~SlL~~~~~~~L~G--~~rI~l~s~GsG~~~~ 787 (945)
.|+..|-..-++.|||-++|+++.|.-++.+.....-+| -++|+|++||-|....
T Consensus 332 ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~vll~~fG~Glt~~ 388 (399)
T PLN03171 332 EKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELGVMMAFGPGLTVD 388 (399)
T ss_pred HHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceEEEEEEcccHHHH
Confidence 455555334489999999999999999986532101132 1689999999996544
No 71
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=97.50 E-value=0.00016 Score=82.87 Aligned_cols=138 Identities=15% Similarity=0.095 Sum_probs=91.5
Q ss_pred ccceeeeeeecCCccccHHHHHhhcC------------------------CCcccchhccCCccccCCCCC---------
Q psy11265 8 NVGILGIEFYFPSQYVDQTELEKHDQ------------------------VSAGKYTIGLGQAKMGFCSDL--------- 54 (945)
Q Consensus 8 ~VGI~ai~~y~p~~yvd~~~L~~~~g------------------------v~~~Kyt~GLGq~~m~~~~~~--------- 54 (945)
+|.|.++..|+|+..|+++||++.-+ .+..+...-.|.....+..+.
T Consensus 2 ~~~I~~~g~~lP~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~ 81 (372)
T PRK07515 2 NVVISGTGLYTPPESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPDRMR 81 (372)
T ss_pred CcEEEEEEeecCCccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCcccccC
Confidence 68999999999999999999987621 122333222344444443321
Q ss_pred -----------ccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccccccCcc
Q psy11265 55 -----------EDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNI 123 (945)
Q Consensus 55 -----------EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~ 123 (945)
+....|++.|++++|++.++++++|+.| .++|... ...|.... ......|...+.
T Consensus 82 ~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~l-i~~~~~~--~~~~p~~a---~~v~~~Lgl~~~-------- 147 (372)
T PRK07515 82 PRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAV-IVACSNM--QRAYPAMA---IEIQQALGIEGF-------- 147 (372)
T ss_pred cccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEE-EEECCCC--CCCCcHHH---HHHHHhcCCCCc--------
Confidence 1346799999999999999999999988 6776510 01111111 111233443322
Q ss_pred hhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 124 QGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 124 ~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
.+++..+|.|+..| |..|..+|+ + +....+|| ++|.
T Consensus 148 --~~~v~~aCasg~~a-l~~A~~~i~--~--g~~~~vLvv~~e~ 184 (372)
T PRK07515 148 --AFDMNVACSSATFG-IQTAANAIR--S--GSARRVLVVNPEI 184 (372)
T ss_pred --EEEecchhHHHHHH-HHHHHHHHH--c--CCCCEEEEEeeec
Confidence 36777899999999 888889986 3 35678888 7776
No 72
>COG0544 Tig FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]
Probab=97.48 E-value=0.00039 Score=81.39 Aligned_cols=93 Identities=16% Similarity=0.201 Sum_probs=73.5
Q ss_pred CCCCCEEEEEEEEEEecCCCcEEecCCCCCcCeEEEccccchhhhHHHHHhcCCCCcEEEE--EecCCccccCCccchhh
Q psy11265 289 NSICLTVHFHFVTQLCDSDNTILDDSRKLGKPMQLVLGKKFKLEVWETLVKHMSIGEISKF--VCDKSLVSAYPFVSKTL 366 (945)
Q Consensus 289 P~~g~~V~VhY~g~l~~~dGtvfDsS~~~g~P~~f~lG~g~vI~G~e~~v~~M~~GE~a~~--~i~pe~~~aYG~~~~~l 366 (945)
...||.|+|.|.|+. ||..|+.-. .+-+.|.||.|+.|||||.+|.+|++||...+ +.|.+| ..
T Consensus 158 a~~gD~v~IDf~g~i---Dg~~fegg~--ae~~~l~lGs~~fipgFe~~LvG~k~Ge~k~i~vtFP~dy----~a----- 223 (441)
T COG0544 158 AENGDRVTIDFEGSV---DGEEFEGGK--AENFSLELGSGRFIPGFEDQLVGMKAGEEKDIKVTFPEDY----HA----- 223 (441)
T ss_pred cccCCEEEEEEEEEE---cCeeccCcc--ccCeEEEEcCCCchhhHHhhhccCcCCCeeEEEEEccccc----ch-----
Confidence 678999999999987 899998753 36799999999999999999999999999774 456665 21
Q ss_pred HhhhcccCCCCcccccccccccccccccccccccCCCCcEEEEEEEEeeeCCchhhhhhhccCHHH
Q psy11265 367 RDAAKHSADGTEQSKRHCCGVQMHTGYEDLNELLKKSQDLTFTIELLQVESPEEYEQESWQLTEAE 432 (945)
Q Consensus 367 r~i~~~g~~G~~~~~~~~~G~~m~~G~~~~~~~ipp~s~L~FeVELl~v~~p~~y~ke~w~ms~eE 432 (945)
. --+|.+..|.|+|..|.+ ++.=+|+++-
T Consensus 224 --------~------------------------~LaGK~a~F~V~vkeVk~-----~elpEldDEf 252 (441)
T COG0544 224 --------E------------------------ELAGKEATFKVKVKEVKK-----RELPELDDEF 252 (441)
T ss_pred --------h------------------------HhCCCceEEEEEEEEEee-----cCCCCCCHHH
Confidence 0 124778999999999987 3444555443
No 73
>PLN03168 chalcone synthase; Provisional
Probab=97.31 E-value=0.00023 Score=82.43 Aligned_cols=139 Identities=11% Similarity=0.098 Sum_probs=96.1
Q ss_pred cceeeeeeecCCccccHHHHHhhcC-C-----Ccc---cch-----hccCCccccCCCC---------------------
Q psy11265 9 VGILGIEFYFPSQYVDQTELEKHDQ-V-----SAG---KYT-----IGLGQAKMGFCSD--------------------- 53 (945)
Q Consensus 9 VGI~ai~~y~p~~yvd~~~L~~~~g-v-----~~~---Kyt-----~GLGq~~m~~~~~--------------------- 53 (945)
+-|.+|.-..|++++.|+++.++-. + .+. |+. -||-...+.+..+
T Consensus 16 ~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~~r~~ 95 (389)
T PLN03168 16 ACVLGIGTAVPPAEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLNVRHD 95 (389)
T ss_pred eEEEEEeccCCCcccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHHHHHH
Confidence 4599999999999999999887741 1 121 232 1444444433220
Q ss_pred --CccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhh
Q psy11265 54 --LEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYS 131 (945)
Q Consensus 54 --~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~ 131 (945)
.|....||..|++++|++.++++++|+.| +|.|. +... ..-........|++++ +..|++++..
T Consensus 96 ~~~~~a~~La~~Aa~~AL~~ag~~~~dId~l-I~~T~-----Tg~~-~Ps~a~~l~~~LGl~~-------~~~r~~d~~~ 161 (389)
T PLN03168 96 IVVVQVPKLAAEAAQKAIKEWGGRKSDITHI-VFATT-----SGVN-MPGADHALAKLLGLKP-------TVKRVMMYQT 161 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEE-EEECC-----CCCC-CccHHHHHHHHhCcCC-------cceeeeeeCC
Confidence 12578999999999999999999999999 88888 1111 1111112224455432 2346789999
Q ss_pred hhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 132 TALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 132 acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
+|+|+..| |..|..+++ + ++.+++|| ++++
T Consensus 162 gC~g~~~a-L~~A~~~i~--~--~~~~~VLVV~~E~ 192 (389)
T PLN03168 162 GCFGGASV-LRVAKDLAE--N--NKGARVLAVASEV 192 (389)
T ss_pred ccHHHHHH-HHHHHHHHH--h--CCCCEEEEEEEeh
Confidence 99999999 999999996 2 47899998 8775
No 74
>PLN03170 chalcone synthase; Provisional
Probab=97.23 E-value=0.00036 Score=81.09 Aligned_cols=139 Identities=11% Similarity=0.008 Sum_probs=92.0
Q ss_pred cceeeeeeecCCccccHHHHHhhcC-------CCcc--cchh---ccCCccccCCC--------------------CCcc
Q psy11265 9 VGILGIEFYFPSQYVDQTELEKHDQ-------VSAG--KYTI---GLGQAKMGFCS--------------------DLED 56 (945)
Q Consensus 9 VGI~ai~~y~p~~yvd~~~L~~~~g-------v~~~--Kyt~---GLGq~~m~~~~--------------------~~ED 56 (945)
.-|.+|...+|++.+.|+++.++-. .... |+.. .=|-++..++- .+.|
T Consensus 21 ~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~~ 100 (401)
T PLN03170 21 ATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQD 100 (401)
T ss_pred eEEEEEeecCCCccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHHHHHH
Confidence 4599999999999999998777631 1111 2211 11333322222 1223
Q ss_pred HH-----HHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhh
Q psy11265 57 IN-----SICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYS 131 (945)
Q Consensus 57 iv-----sla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~ 131 (945)
+. .||..|++++|++.++++++|+.| ++.|. +.++.-+ ........|+.++ ...|++++..
T Consensus 101 ~~~~~a~~La~~Aa~~AL~~ag~~~~dId~l-I~~T~-----Tg~~~Ps-~a~~l~~~LGl~~-------~~~r~~d~~~ 166 (401)
T PLN03170 101 IVVVEVPKLGKAAAQKAIKEWGQPKSKITHL-VFCTT-----SGVDMPG-ADYQLTKMLGLRP-------SVNRLMMYQQ 166 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEcc-----CCCCCCh-HHHHHHHHhCcCc-------ccHHHHhhcC
Confidence 33 499999999999999999999988 77777 2222111 1112223444432 2347899999
Q ss_pred hhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 132 TALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 132 acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
+|+|++.+ |..|..+++ .++.+++|| ++++
T Consensus 167 gC~G~~~a-L~~A~~l~~----~~~~~~vLVV~~E~ 197 (401)
T PLN03170 167 GCFAGGTV-LRVAKDLAE----NNRGARVLVVCSEI 197 (401)
T ss_pred hhHHHHHH-HHHHHHHHH----cCCCCeEEEEEEeh
Confidence 99999999 999999886 246789998 8765
No 75
>PLN03172 chalcone synthase family protein; Provisional
Probab=97.23 E-value=0.00032 Score=81.29 Aligned_cols=140 Identities=11% Similarity=-0.005 Sum_probs=92.3
Q ss_pred cceeeeeeecCCccccHHHHHhhcC-------CCcc--cchh---ccCCccccCCC--------------------CCcc
Q psy11265 9 VGILGIEFYFPSQYVDQTELEKHDQ-------VSAG--KYTI---GLGQAKMGFCS--------------------DLED 56 (945)
Q Consensus 9 VGI~ai~~y~p~~yvd~~~L~~~~g-------v~~~--Kyt~---GLGq~~m~~~~--------------------~~ED 56 (945)
+-|.+|...+|++.+.|+|+.++-. .... |+.. .=|-++.-++. .+.|
T Consensus 17 ~~I~~igta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~~ 96 (393)
T PLN03172 17 ATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLDARQD 96 (393)
T ss_pred eEEEEEEecCCCccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHHHHHH
Confidence 4599999999999999999887632 1111 1110 11333222211 1222
Q ss_pred -----HHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhh
Q psy11265 57 -----INSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYS 131 (945)
Q Consensus 57 -----ivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~ 131 (945)
.+.||+.|++++|++.++++++|+.| ++.|. +.++. .-........|+.++.. .+.+++..
T Consensus 97 ~~~~~a~~La~~Aa~~aL~~ag~~~~dId~i-i~~t~-----t~~~~-P~~a~~l~~~LGl~~~~-------~~~~~~~~ 162 (393)
T PLN03172 97 MVVVEVPKLGKEAAAKAIKEWGQPKSKITHL-VFCTT-----SGVDM-PGADYQLTKLLGLKPSV-------KRFMMYQQ 162 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEcc-----CCCcC-chHHHHHHHHhCCCCCc-------eEEeeeCC
Confidence 34899999999999999999999988 78887 22221 11112222445543322 34567788
Q ss_pred hhhhHHHHHHhhccceEEeecccCCCcceee-ecccc
Q psy11265 132 TALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLSD 167 (945)
Q Consensus 132 acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdia 167 (945)
+|+|++.+ |..|..+++ + ++.+++|| ++++.
T Consensus 163 gC~g~~~a-L~~A~~~~~--~--~~~~~vLVV~~E~~ 194 (393)
T PLN03172 163 GCFAGGTV-LRLAKDLAE--N--NAGSRVLVVCSEIT 194 (393)
T ss_pred chHHHHHH-HHHHHHHHH--c--CCCCeEEEEEEehh
Confidence 99999999 999999996 2 47789998 88864
No 76
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=97.14 E-value=0.00022 Score=65.04 Aligned_cols=75 Identities=19% Similarity=0.127 Sum_probs=49.1
Q ss_pred cchHHHHHHhCCCccchHHHHHHhhhccccccchhhHHHhhhcchHHHHhhhchhhhhccccCcccchhHHHHHHHHhcc
Q psy11265 684 RDIEQYFMSHNRTEYEGAEAFAHIKNLEDTYFNRDIEQYFMSHSKQSFERLTKPGLYLANLIGNMYTPSLYGCLVSLLIQ 763 (945)
Q Consensus 684 ~~~~~~~~~H~p~~~m~~~a~~~l~~~e~~~~~~~~~~~~~~~~~~~~~~kv~psl~~~~~vGN~YTaSlyl~L~SlL~~ 763 (945)
.+..|++++|++..++-.. +...+ .++. +++... + ++.||++++|++++|..++++
T Consensus 8 ~~did~~i~hq~~~~~~~~-~~~~l----------------gi~~----~~~~~~--~-~~~Gn~~sa~~~~~L~~~~~~ 63 (90)
T PF08541_consen 8 PDDIDHFIPHQASKKILDS-IAKRL----------------GIPP----ERFPDN--L-AEYGNTGSASIPINLADALEE 63 (90)
T ss_dssp GGGESEEEE-SSSHHHHHH-HHHHH----------------TS-G----GGBE-T--H-HHH-B-GGGHHHHHHHHHHHT
T ss_pred HHHCCEEEeCCCCHHHHHH-HHHHc----------------CCcH----HHHHHH--H-hccCcchhhhHHHHHHHHHHc
Confidence 3455789999888555433 22211 1221 233332 2 899999999999999999997
Q ss_pred CCccccCCCcEEEEEecCCCcc
Q psy11265 764 TPWERLQGMSRIGLFSYGSDNI 785 (945)
Q Consensus 764 ~~~~~L~G~~rI~l~s~GsG~~ 785 (945)
...+ +| ++|+++++|+|..
T Consensus 64 g~~~--~G-d~vl~~~~G~G~~ 82 (90)
T PF08541_consen 64 GRIK--PG-DRVLLVGFGAGFS 82 (90)
T ss_dssp TSSC--TT-EEEEEEEEETTTE
T ss_pred CCCC--CC-CEEEEEEEEhhhe
Confidence 6433 89 9999999999954
No 77
>PLN03173 chalcone synthase; Provisional
Probab=97.12 E-value=0.0006 Score=78.98 Aligned_cols=139 Identities=10% Similarity=-0.004 Sum_probs=92.3
Q ss_pred cceeeeeeecCCccccHHHHHhhcC------CCcc---cchh---ccCCccccCCC-----------------C---C--
Q psy11265 9 VGILGIEFYFPSQYVDQTELEKHDQ------VSAG---KYTI---GLGQAKMGFCS-----------------D---L-- 54 (945)
Q Consensus 9 VGI~ai~~y~p~~yvd~~~L~~~~g------v~~~---Kyt~---GLGq~~m~~~~-----------------~---~-- 54 (945)
+-|.+|..-.|++.+.|+++.++-. -++. |+.. .=|-++..++- . +
T Consensus 17 ~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~~ 96 (391)
T PLN03173 17 ATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLDARQD 96 (391)
T ss_pred eEEEEEEccCCCcccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHHHHHH
Confidence 5599999999999999999887731 1221 2211 11333332222 1 1
Q ss_pred ---ccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhh
Q psy11265 55 ---EDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYS 131 (945)
Q Consensus 55 ---EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~ 131 (945)
|....||+.|++++|++.++++++|+.| ++.|. +.++..+ ........|+.++ +..+.+++..
T Consensus 97 ~~~~~a~~La~~Aa~~AL~~ag~~~~dId~l-i~~t~-----t~~~~P~-~a~~l~~~LGl~~-------~~~~~~~~~~ 162 (391)
T PLN03173 97 MVVVEVPKLGKEAAAKAIKEWGQPKSKITHL-VFCTT-----SGVDMPG-ADYQLTKLLGLRS-------SVKRFMMYQQ 162 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEcc-----CCCcccH-HHHHHHHHhCCCc-------cceeeehhcC
Confidence 1234899999999999999999999988 78887 2222111 1111223344432 2345678899
Q ss_pred hhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 132 TALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 132 acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
+|.|++.+ |..|..+++ .++.+++|| +++.
T Consensus 163 gC~g~~~a-L~~A~~~~~----~~~~~~vLVV~~E~ 193 (391)
T PLN03173 163 GCFAGGTV-LRLAKDLAE----NNKGARVLVVCSEI 193 (391)
T ss_pred ccHHHHHH-HHHHHHHHH----hCCCCeEEEEEEeh
Confidence 99999999 999999986 247899998 8775
No 78
>PLN02377 3-ketoacyl-CoA synthase
Probab=97.04 E-value=0.00068 Score=80.52 Aligned_cols=49 Identities=16% Similarity=0.196 Sum_probs=39.1
Q ss_pred hchhhhhccccCcccchhHHHHHHHHhccCCccccCCCcEEEEEecCCCccc
Q psy11265 735 TKPGLYLANLIGNMYTPSLYGCLVSLLIQTPWERLQGMSRIGLFSYGSDNIK 786 (945)
Q Consensus 735 v~psl~~~~~vGN~YTaSlyl~L~SlL~~~~~~~L~G~~rI~l~s~GsG~~~ 786 (945)
++++...-.+.||+-++|++..|.-++++...+ +| +||.+++||+|-..
T Consensus 422 ~e~sr~tL~r~GNTSSaSI~~aL~~~~~~grik--~G-d~VlliaFGsGf~~ 470 (502)
T PLN02377 422 VEASRMTLHRFGNTSSSSIWYELAYIEAKGRMR--KG-NRVWQIAFGSGFKC 470 (502)
T ss_pred chHHHHHHHhcCCchhhHHHHHHHHHHHcCCCC--CC-CeEEEEEEccccEe
Confidence 445544557999999999999999998765323 89 99999999999543
No 79
>PLN02932 3-ketoacyl-CoA synthase
Probab=96.90 E-value=0.0013 Score=77.78 Aligned_cols=50 Identities=18% Similarity=0.117 Sum_probs=40.6
Q ss_pred hhhchhhhhccccCcccchhHHHHHHHHhccCCccccCCCcEEEEEecCCCcc
Q psy11265 733 RLTKPGLYLANLIGNMYTPSLYGCLVSLLIQTPWERLQGMSRIGLFSYGSDNI 785 (945)
Q Consensus 733 ~kv~psl~~~~~vGN~YTaSlyl~L~SlL~~~~~~~L~G~~rI~l~s~GsG~~ 785 (945)
.++++|...=.+-|||-++|++..|.-+......+ +| +||.+++||+|-.
T Consensus 396 ~~~e~s~~tL~rfGNTSSaSI~~~L~~~ea~grik--~G-d~vl~iaFGsGf~ 445 (478)
T PLN02932 396 LDVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMK--KG-DRIWQIALGSGFK 445 (478)
T ss_pred HHHHHHHHHHHHhCChhhhHHHHHHHHHHHcCCCC--CC-CEEEEEEEeccHH
Confidence 45667766668999999999999999988654322 89 9999999999854
No 80
>PLN02932 3-ketoacyl-CoA synthase
Probab=96.66 E-value=0.0023 Score=75.64 Aligned_cols=142 Identities=18% Similarity=0.221 Sum_probs=100.2
Q ss_pred CCCcccceeeeeeecCCc--cccHHHHHhhcCCC--cccc----------------hhccCCccccCCCC----------
Q psy11265 4 QWPENVGILGIEFYFPSQ--YVDQTELEKHDQVS--AGKY----------------TIGLGQAKMGFCSD---------- 53 (945)
Q Consensus 4 ~~~~~VGI~ai~~y~p~~--yvd~~~L~~~~gv~--~~Ky----------------t~GLGq~~m~~~~~---------- 53 (945)
++|..|-..+-+-|-|+- .|+.+.+.++-... .|+| .-|||++. .++..
T Consensus 63 ~~~~~vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t-~~p~~~~~~~~~~~~ 141 (478)
T PLN02932 63 TRPKPVYLVDFSCYLPPSHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQET-YIPEGLQCLPLQQNL 141 (478)
T ss_pred cCCCcEEEEeeeeecCcccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCce-eeccccccCCHHHHH
Confidence 457778888888888754 45555444432111 1333 23999987 44443
Q ss_pred ---CccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhh
Q psy11265 54 ---LEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKY 130 (945)
Q Consensus 54 ---~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k 130 (945)
+|-...|+..|++++|++.+++|++|+.| +|+|- + .+.+....+.....|+.+.++ .++++.
T Consensus 142 ~~~~~ea~~la~~Aa~~aL~~agi~p~dId~l-Iv~ts-----t-~~~~Pslaa~V~~~lGlr~~i--------~~fdL~ 206 (478)
T PLN02932 142 AVSRKETEEVIIGAVDNLFRNTGISPSDIGIL-VVNSS-----T-FNPTPSLSSILVNKFKLRDNI--------KSLNLG 206 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEcc-----C-CCCCCcHHHHHHHHhCCCCCc--------eEEEec
Confidence 23478999999999999999999999988 88887 1 123444444444667766666 678888
Q ss_pred -hhhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 131 -STALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 131 -~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
-+|.|+..+ |..|..+++. ++.+++|| +++.
T Consensus 207 gmGCSggl~a-L~lA~~ll~~----~~~~~aLVVstE~ 239 (478)
T PLN02932 207 GMGCSAGVIA-IDAAKSLLQV----HRNTYALVVSTEN 239 (478)
T ss_pred cchhhhHHHH-HHHHHHHHHc----CCCCeEEEEEEee
Confidence 799999999 8888999962 36899998 8775
No 81
>PLN03168 chalcone synthase; Provisional
Probab=96.30 E-value=0.0036 Score=72.62 Aligned_cols=55 Identities=11% Similarity=-0.012 Sum_probs=39.0
Q ss_pred hhhchhhhhccccCcccchhHHHHHHHHhccC--Ccc---ccCCCcEEEEEecCCCccccc
Q psy11265 733 RLTKPGLYLANLIGNMYTPSLYGCLVSLLIQT--PWE---RLQGMSRIGLFSYGSDNIKAL 788 (945)
Q Consensus 733 ~kv~psl~~~~~vGN~YTaSlyl~L~SlL~~~--~~~---~L~G~~rI~l~s~GsG~~~~~ 788 (945)
.|+..|-..-++.|||-++|+.+.|--+++.. ++. .-.| +++++++||.|...+.
T Consensus 321 ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~~~g~-~~~ll~afGpG~t~~~ 380 (389)
T PLN03168 321 DKMQGSRDILSEFGNMSSASVLFVLDQIRQRSVKMGASTLGEGS-EFGFFIGFGPGLTLEV 380 (389)
T ss_pred HHHHHHHHHHHHhCccHhhhHHHHHHHHHHHHhhcCCCCCCCCc-cEEEEEEEcchhhhhh
Confidence 45555544448999999999999999988541 110 0135 7999999999976543
No 82
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=95.98 E-value=0.004 Score=66.85 Aligned_cols=143 Identities=16% Similarity=0.049 Sum_probs=90.2
Q ss_pred CCcccceeeeeeecCCccccHHHHHhh--c--CCCc-----ccchh---ccCCccccCCCC-------------------
Q psy11265 5 WPENVGILGIEFYFPSQYVDQTELEKH--D--QVSA-----GKYTI---GLGQAKMGFCSD------------------- 53 (945)
Q Consensus 5 ~~~~VGI~ai~~y~p~~yvd~~~L~~~--~--gv~~-----~Kyt~---GLGq~~m~~~~~------------------- 53 (945)
-+...-|.+|.-.+|++.++|+|+.++ + +.+- .|+.. .=|-++.-++-+
T Consensus 11 ~~g~A~Il~IgTA~P~~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ps~~ 90 (226)
T PF00195_consen 11 SPGPAYILSIGTAVPPHRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFADPSLA 90 (226)
T ss_dssp -SSSEEEEEEEEE-SSEEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSSS-HH
T ss_pred CCCCeEEEEEEEeCCCceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccCccHH
Confidence 345678999999999999999988764 2 2221 22211 113332222221
Q ss_pred ------CccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccccccCcchhhh
Q psy11265 54 ------LEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGAL 127 (945)
Q Consensus 54 ------~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~ 127 (945)
.|...-|+..|+++-|++.|+++++|..| ++-|- +.+-.-++|. ..+..|+++.+. .|..
T Consensus 91 ~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthl-v~vs~-----TG~~~PglD~-~l~~~LgL~~~v-------~R~~ 156 (226)
T PF00195_consen 91 ERNALYAEEAPPLAEEAARKALAEAGLDPSDITHL-VTVSC-----TGIAAPGLDA-RLINRLGLRPDV-------QRTP 156 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEE-EEEES-----SSSECS-HHH-HHHHHHT--TTS-------EEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceE-EEEec-----CCcCCCchhH-HHHhcCCCCCCc-------EEEE
Confidence 26678899999999999999999999999 44443 4555555554 334555554333 4554
Q ss_pred hhhhhhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 128 DKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 128 e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
=...+|+||..+ |..|.++.+ .+|+.++|| |...
T Consensus 157 i~~~GC~gg~~~-L~~A~~~~~----~~p~a~VLvv~vEl 191 (226)
T PF00195_consen 157 IFGMGCAGGAAG-LRRAKDIAR----ANPGARVLVVCVEL 191 (226)
T ss_dssp EES-GGGHHHHH-HHHHHHHHH----HSTT-EEEEEEEEE
T ss_pred EeccchhhHHHH-HHHHHHHHh----CCccceEEEEEEEe
Confidence 455689999999 899999875 358999998 6554
No 83
>TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70).
Probab=95.83 E-value=0.0049 Score=75.33 Aligned_cols=64 Identities=27% Similarity=0.345 Sum_probs=56.4
Q ss_pred ccCCCCcEEEEEEEEeeeCCchhhhhhhccCHHHhhhccchhhHhcccccccccHHHHHHHHHHHHHHH
Q psy11265 399 LLKKSQDLTFTIELLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYL 467 (945)
Q Consensus 399 ~ipp~s~L~FeVELl~v~~p~~y~ke~w~ms~eEkl~~a~~~Ke~GN~~fK~g~y~~A~~kY~rAl~~L 467 (945)
..|++.++...+++-+++. ++.|.|+++|+.+.+..+|+.||.+|+.|+|..|+..|++|+.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~a~~~k~~G~~~~~~~~~~~Ai~~y~~al~~~ 157 (615)
T TIGR00990 94 TAPKNAPVEPADELPEIDE-----SSVANLSEEERKKYAAKLKEKGNKAYRNKDFNKAIKLYSKAIECK 157 (615)
T ss_pred CCCCCCCCCccccccccch-----hhcccCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 3678888888887776654 678999999999999999999999999999999999999998753
No 84
>PLN02377 3-ketoacyl-CoA synthase
Probab=95.78 E-value=0.0046 Score=73.57 Aligned_cols=95 Identities=14% Similarity=0.108 Sum_probs=72.6
Q ss_pred CCCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhh-
Q psy11265 52 SDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKY- 130 (945)
Q Consensus 52 ~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k- 130 (945)
..+|....++..|+.++|++.+++|++|+.| +| |- |....+....+.....|+.++++ +++++-
T Consensus 167 ~~~~ea~~l~~~A~~~aL~kaGi~p~dID~L-Vv-~c-----S~~~~~PSlaa~V~~~LGlr~~v--------~afdL~g 231 (502)
T PLN02377 167 AAREEAEQVMFGALDNLFANTNVNPKDIGIL-VV-NC-----SLFNPTPSLSAMIVNKYKLRGNI--------RSFNLGG 231 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEE-EE-EC-----CCCCCCCcHHHHHHHHhCCCCCC--------eEEeccc
Confidence 4578899999999999999999999999988 66 33 12222333333444667777677 778998
Q ss_pred hhhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 131 STALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 131 ~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
.+|.|+..+ |..|..+++. ++++++|| ++++
T Consensus 232 mGCsggl~a-L~lA~~ll~~----~~~~~aLVVstE~ 263 (502)
T PLN02377 232 MGCSAGVIA-VDLAKDMLQV----HRNTYAVVVSTEN 263 (502)
T ss_pred chhhHHHHH-HHHHHHHHHc----CCCCEEEEEEEec
Confidence 599999999 8888899962 37899998 8876
No 85
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=95.76 E-value=0.0053 Score=65.86 Aligned_cols=97 Identities=10% Similarity=0.003 Sum_probs=68.3
Q ss_pred hccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCcccccc
Q psy11265 41 IGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKA 120 (945)
Q Consensus 41 ~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~ 120 (945)
+|||+. ..+|+..|++++|++.++++++|+.| .|+|.. .+. +. ..........++.. +.
T Consensus 1 ~~~~~~----------~~~l~~~A~~~al~~ag~~~~~i~~l-i~~~~~-~~~---~~-~~~a~~i~~~lg~~-~~---- 59 (254)
T cd00327 1 TGLGIT----------ASELGFEAAEQAIADAGLSKGPIVGV-IVGTTG-GSG---EF-SGAAGQLAYHLGIS-GG---- 59 (254)
T ss_pred CcchHH----------HHHHHHHHHHHHHHHcCCCCCCceEE-EEEECC-CCc---cc-cHHHHHHHHHhCCC-CC----
Confidence 478887 78999999999999999999999998 888771 000 00 00111122333332 22
Q ss_pred CcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecccc
Q psy11265 121 GNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLSD 167 (945)
Q Consensus 121 ~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdia 167 (945)
..+.+..+|.++..| |..|..+|+ + +..+.+|| ++|..
T Consensus 60 ----~~~~i~~~C~s~~~a-l~~A~~~i~--~--g~~~~~lv~~~e~~ 98 (254)
T cd00327 60 ----PAYSVNQACATGLTA-LALAVQQVQ--N--GKADIVLAGGSEEF 98 (254)
T ss_pred ----CcceeccHhHHHHHH-HHHHHHHHH--C--CCCCEEEEEeccee
Confidence 346788999999999 899999996 3 34688998 88873
No 86
>KOG0549|consensus
Probab=95.72 E-value=0.0076 Score=61.90 Aligned_cols=37 Identities=24% Similarity=0.336 Sum_probs=34.7
Q ss_pred EEccccchhhhHHHHHhcCCCCcEEEEEecCCccccCCc
Q psy11265 323 LVLGKKFKLEVWETLVKHMSIGEISKFVCDKSLVSAYPF 361 (945)
Q Consensus 323 f~lG~g~vI~G~e~~v~~M~~GE~a~~~i~pe~~~aYG~ 361 (945)
|++|.++||+|+|+++.+|+.||++++++||++ +||.
T Consensus 1 ~~~g~~~vi~gm~~~~~g~c~ge~rkvv~pp~l--~fg~ 37 (188)
T KOG0549|consen 1 FTLGQGFVIPGMDQALEGMCNGEKRKVVIPPHL--GFGE 37 (188)
T ss_pred CcccceEEecCHHHHhhhhhccccceeccCCcc--cccc
Confidence 578999999999999999999999999999999 7884
No 87
>KOG4648|consensus
Probab=95.28 E-value=0.0083 Score=66.81 Aligned_cols=36 Identities=39% Similarity=0.622 Sum_probs=32.1
Q ss_pred HHHhhhccchhhHhcccccccccHHHHHHHHHHHHH
Q psy11265 430 EAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALG 465 (945)
Q Consensus 430 ~eEkl~~a~~~Ke~GN~~fK~g~y~~A~~kY~rAl~ 465 (945)
.++.+.....+||+||.|||+|+|.+|+.+|.+++.
T Consensus 90 ~~~LL~~~SEiKE~GN~yFKQgKy~EAIDCYs~~ia 125 (536)
T KOG4648|consen 90 AQQLLKKASEIKERGNTYFKQGKYEEAIDCYSTAIA 125 (536)
T ss_pred HHHHHHhhHHHHHhhhhhhhccchhHHHHHhhhhhc
Confidence 355677788899999999999999999999999876
No 88
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=95.19 E-value=0.0097 Score=63.81 Aligned_cols=83 Identities=12% Similarity=0.051 Sum_probs=55.3
Q ss_pred CCcchHHHHHHhCCCccchHHHHHHhhhccccccchhhHHHhhhcchHHHHhhh--chhhhhccccCcccchhHHHHHHH
Q psy11265 682 FNRDIEQYFMSHNRTEYEGAEAFAHIKNLEDTYFNRDIEQYFMSHSKQSFERLT--KPGLYLANLIGNMYTPSLYGCLVS 759 (945)
Q Consensus 682 ~~~~~~~~~~~H~p~~~m~~~a~~~l~~~e~~~~~~~~~~~~~~~~~~~~~~kv--~psl~~~~~vGN~YTaSlyl~L~S 759 (945)
...+..|+|..|.+++.+.......+. .. ..+. -+......++||++++|.++.|+.
T Consensus 160 ~~~~did~~~~h~~~~~~~~~~~~~~~-----------------~~----~~~~~~~~~~~~~~~~G~~~~as~~~~l~~ 218 (254)
T cd00327 160 LTPSDIDYVEAHGTGTPIGDAVELALG-----------------LD----PDGVRSPAVSATLIMTGHPLGAAGLAILDE 218 (254)
T ss_pred CCHHHCCEEEccCCcCccccHHHHHHH-----------------HH----HhCCCCCceeccccccccchHHHHHHHHHH
Confidence 334556789999999887655444331 00 0111 134445589999999999999999
Q ss_pred HhccCCcc-----ccCCCcEEEEEecCCCccc
Q psy11265 760 LLIQTPWE-----RLQGMSRIGLFSYGSDNIK 786 (945)
Q Consensus 760 lL~~~~~~-----~L~G~~rI~l~s~GsG~~~ 786 (945)
++..-... .-+| ++++++++|.|-..
T Consensus 219 ~~~~~~~~~~~~~~~~~-~~~l~~~~g~Gg~~ 249 (254)
T cd00327 219 LLLMLEHEFIPPTPREP-RTVLLLGFGLGGTN 249 (254)
T ss_pred HHHHHhCCCcCCCCCCc-CEEEEeeEcCCCcc
Confidence 88653211 1157 99999999998643
No 89
>PLN03170 chalcone synthase; Provisional
Probab=95.07 E-value=0.03 Score=65.33 Aligned_cols=59 Identities=14% Similarity=0.078 Sum_probs=40.8
Q ss_pred hhhchhhhhccccCcccchhHHHHHHHHhccC--CccccCC--CcEEEEEecCCCcccccccc
Q psy11265 733 RLTKPGLYLANLIGNMYTPSLYGCLVSLLIQT--PWERLQG--MSRIGLFSYGSDNIKALFRR 791 (945)
Q Consensus 733 ~kv~psl~~~~~vGN~YTaSlyl~L~SlL~~~--~~~~L~G--~~rI~l~s~GsG~~~~~~~~ 791 (945)
.++..|-..-++.|||-++|+++.|--+++.. ...--+| -++++|++||-|...+..-.
T Consensus 326 ~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll 388 (401)
T PLN03170 326 ERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVETVVL 388 (401)
T ss_pred HHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHhHHhHHh
Confidence 45555555568999999999999999998421 1110134 14799999999977655444
No 90
>KOG4234|consensus
Probab=95.05 E-value=0.016 Score=60.71 Aligned_cols=36 Identities=33% Similarity=0.527 Sum_probs=33.1
Q ss_pred hhccchhhHhcccccccccHHHHHHHHHHHHHHHHh
Q psy11265 434 LASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQ 469 (945)
Q Consensus 434 l~~a~~~Ke~GN~~fK~g~y~~A~~kY~rAl~~Le~ 469 (945)
++.+..+|.+||.+|+.|+|.+|..+|.+||...-.
T Consensus 92 ~~kad~lK~EGN~~F~ngdyeeA~skY~~Ale~cp~ 127 (271)
T KOG4234|consen 92 IEKADSLKKEGNELFKNGDYEEANSKYQEALESCPS 127 (271)
T ss_pred HHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHhCcc
Confidence 778999999999999999999999999999987643
No 91
>KOG0547|consensus
Probab=94.80 E-value=0.018 Score=66.91 Aligned_cols=42 Identities=21% Similarity=0.387 Sum_probs=39.2
Q ss_pred hccCHHHhhhccchhhHhcccccccccHHHHHHHHHHHHHHH
Q psy11265 426 WQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYL 467 (945)
Q Consensus 426 w~ms~eEkl~~a~~~Ke~GN~~fK~g~y~~A~~kY~rAl~~L 467 (945)
-.|+.+|+++.|..+|.+||.+|++|+|.+||+.|..|+.+-
T Consensus 104 ~a~~~e~~~k~A~~lK~~GN~~f~~kkY~eAIkyY~~AI~l~ 145 (606)
T KOG0547|consen 104 KAMLKEERLKYAAALKTKGNKFFRNKKYDEAIKYYTQAIELC 145 (606)
T ss_pred hccChHHHHHHHHHHHhhhhhhhhcccHHHHHHHHHHHHhcC
Confidence 468999999999999999999999999999999999999854
No 92
>PLN02192 3-ketoacyl-CoA synthase
Probab=94.60 E-value=0.017 Score=68.80 Aligned_cols=142 Identities=15% Similarity=0.202 Sum_probs=92.9
Q ss_pred CCCcccceeeeeeecCCc--cccHHHHHhhcCCCcccc-------------hhccCCcc------------ccCCCCCcc
Q psy11265 4 QWPENVGILGIEFYFPSQ--YVDQTELEKHDQVSAGKY-------------TIGLGQAK------------MGFCSDLED 56 (945)
Q Consensus 4 ~~~~~VGI~ai~~y~p~~--yvd~~~L~~~~gv~~~Ky-------------t~GLGq~~------------m~~~~~~ED 56 (945)
++|..|-..+-+-|-|+- -|+.+.+.++-... |+| .=|||++. .++...+|-
T Consensus 97 ~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~f~~~~~~~sglg~~t~~p~~~~~~~~~~~~~~~~~E 175 (511)
T PLN02192 97 TRPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLT-GSFTEENLEFQRKILERSGLGESTYLPEAVLNVPPNPCMAEARKE 175 (511)
T ss_pred cCCCcEEEEeeeeecCCccccccHHHHHHHHHHc-CCCCHHHHHHHHHHHHhcCCCCcccCChhhccCCCCccHHHHHHH
Confidence 356778888888887764 34444443332111 332 23777753 122233455
Q ss_pred HHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhh-hhhhh
Q psy11265 57 INSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKY-STALG 135 (945)
Q Consensus 57 ivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k-~acyg 135 (945)
...+...|++++|++.+++|++|+.| +|++- ....+....+..+..++..++. .++++- -+|.|
T Consensus 176 a~~~~~~Aa~~aL~kaGi~p~DIDiL-Iv~~S------~~~~~PSlaa~I~n~lGlr~~i--------~afdLsgmGCSg 240 (511)
T PLN02192 176 AETVMFGAIDQLLAKTSVKPKDIGIL-IVNCS------LFNPTPSLSAMVINHYKLRGNI--------LSYNLGGMGCSA 240 (511)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEE-EEECC------CCCCCchHHHHHHHHhCCCCCc--------eEEEcccchhhh
Confidence 56677789999999999999999988 66644 1222333333344566666566 778988 59999
Q ss_pred HHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 136 YLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 136 ~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
+..| |..|.++++. ++++++|| ++++
T Consensus 241 gl~a-LdlA~~lL~a----~~~~~aLVVstE~ 267 (511)
T PLN02192 241 GLIS-IDLAKHLLQV----HPNSYALVISMEN 267 (511)
T ss_pred HHHH-HHHHHHHHHc----CCCCeEEEEEEEe
Confidence 9999 9989999962 37789998 7653
No 93
>PLN00415 3-ketoacyl-CoA synthase
Probab=94.34 E-value=0.054 Score=63.88 Aligned_cols=140 Identities=11% Similarity=0.088 Sum_probs=86.4
Q ss_pred CCcccceeeeeeecCC--ccccHHHHHhhcCCCcccchh-------------ccCCc---------cccCCC--CCccHH
Q psy11265 5 WPENVGILGIEFYFPS--QYVDQTELEKHDQVSAGKYTI-------------GLGQA---------KMGFCS--DLEDIN 58 (945)
Q Consensus 5 ~~~~VGI~ai~~y~p~--~yvd~~~L~~~~gv~~~Kyt~-------------GLGq~---------~m~~~~--~~EDiv 58 (945)
+|..|-..+-+-|-|+ ..|+.+.+.++-.. -|+|+. |||++ .--.++ +.....
T Consensus 56 ~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~-~~~~~~~s~~F~~~i~~rSGlg~et~~p~~~~~~~~~~~~~~~~~e~ 134 (466)
T PLN00415 56 RSKPVYLVDFSCHQPTDSCKISSETFFNMAKG-AQLYTEETIQFMTRILNRSGLGDDTYSPRCMLTSPPTPSMYEARHES 134 (466)
T ss_pred CCCcEEEEeeeeecCCccccccHHHHHHHHHH-cCCCCHHHHHHHHHHHHHcCCCCCeeeCCccccCCCCCChhhhHHHH
Confidence 4666777777777654 34444443333111 133331 66653 212222 344556
Q ss_pred HHHHH-HHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhh-hhhhH
Q psy11265 59 SICLT-VVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYS-TALGY 136 (945)
Q Consensus 59 sla~~-a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~-acyg~ 136 (945)
.|++- |++++|++.+++|++|+.| ++++. ........-......++.+.++ ..+++.. +|.|+
T Consensus 135 em~i~~A~~~aL~~aGi~p~dID~L-Ivs~T------~~~~~Pslaa~l~~~LGLr~~v--------~~~dL~gmGCsgg 199 (466)
T PLN00415 135 ELVIFGALNSLFKKTGIEPREVGIF-IVNCS------LFNPNPSLSSMIVNRYKLKTDV--------KTYNLSGMGCSAG 199 (466)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEE-EEECc------CCCCCchHHHHHHHHhCCCCCc--------eEEEeccccchHH
Confidence 66666 6789999999999999988 45433 1111222222333556666566 6789997 99999
Q ss_pred HHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 137 LEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 137 t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
..+ |..|.++++ .+|+.++|| +++
T Consensus 200 v~a-L~lA~~ll~----a~~~~~aLVVs~E 224 (466)
T PLN00415 200 AIS-VDLATNLLK----ANPNTYAVIVSTE 224 (466)
T ss_pred HHH-HHHHHHHHH----hCCCCEEEEEEEe
Confidence 999 999999996 247889998 765
No 94
>PLN03172 chalcone synthase family protein; Provisional
Probab=94.30 E-value=0.058 Score=62.76 Aligned_cols=59 Identities=14% Similarity=0.059 Sum_probs=40.9
Q ss_pred hhhchhhhhccccCcccchhHHHHHHHHhccC-Ccccc-CC--CcEEEEEecCCCcccccccc
Q psy11265 733 RLTKPGLYLANLIGNMYTPSLYGCLVSLLIQT-PWERL-QG--MSRIGLFSYGSDNIKALFRR 791 (945)
Q Consensus 733 ~kv~psl~~~~~vGN~YTaSlyl~L~SlL~~~-~~~~L-~G--~~rI~l~s~GsG~~~~~~~~ 791 (945)
.++..|-..=++.|||-++|+++.|--+++.. ....+ +| .+++++++||-|...+..-.
T Consensus 322 ~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll 384 (393)
T PLN03172 322 EKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLTVETVVL 384 (393)
T ss_pred HHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCCcceeeeeee
Confidence 45666655558999999999999999987531 00111 22 15789999999987765544
No 95
>PLN03173 chalcone synthase; Provisional
Probab=93.81 E-value=0.054 Score=63.00 Aligned_cols=83 Identities=10% Similarity=-0.013 Sum_probs=54.6
Q ss_pred chHHHHHHhCCCccchHHHHHHhhhccccccchhhHHHhhhcchHHHHhhhchhhhhccccCcccchhHHHHHHHHhccC
Q psy11265 685 DIEQYFMSHNRTEYEGAEAFAHIKNLEDTYFNRDIEQYFMSHSKQSFERLTKPGLYLANLIGNMYTPSLYGCLVSLLIQT 764 (945)
Q Consensus 685 ~~~~~~~~H~p~~~m~~~a~~~l~~~e~~~~~~~~~~~~~~~~~~~~~~kv~psl~~~~~vGN~YTaSlyl~L~SlL~~~ 764 (945)
...++|+.|++-.++ ++++...| .++ ..|+.+|...=++.|||-++|+++.|.-+++..
T Consensus 295 ~di~~~v~Hqgg~~I-l~~v~~~L----------------gL~----~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~ 353 (391)
T PLN03173 295 WNSLFWIAHPGGPAI-LDQVEAKL----------------ALK----PEKLRATRHVLSEYGNMSSACVLFILDEMRKKS 353 (391)
T ss_pred cccCeEEECCCcHHH-HHHHHHHc----------------CCC----hHHHHHHHHHHHHhCcchhhHHHHHHHHHHHhh
Confidence 445679999776444 33333322 222 245666655569999999999999999999631
Q ss_pred --Cc--cc-cCCCcEEEEEecCCCcccccc
Q psy11265 765 --PW--ER-LQGMSRIGLFSYGSDNIKALF 789 (945)
Q Consensus 765 --~~--~~-L~G~~rI~l~s~GsG~~~~~~ 789 (945)
.. .. -.+ +++++++||-|-..+..
T Consensus 354 ~~~~~~~~g~~~-~~~l~~afGpG~t~e~~ 382 (391)
T PLN03173 354 AEDGLKSTGEGL-EWGVLFGFGPGLTVETV 382 (391)
T ss_pred hhcCCCCCCCCc-ceEEEEEeCchHHHHHH
Confidence 10 00 124 67999999999776544
No 96
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=92.98 E-value=0.053 Score=60.60 Aligned_cols=84 Identities=10% Similarity=0.036 Sum_probs=51.2
Q ss_pred CCcchHHHHHHhCCCccchHHHHHHhhhccccccchhhHHHhhhcchHHHHhhhchhhhhccccCcccchhHHHHHHHHh
Q psy11265 682 FNRDIEQYFMSHNRTEYEGAEAFAHIKNLEDTYFNRDIEQYFMSHSKQSFERLTKPGLYLANLIGNMYTPSLYGCLVSLL 761 (945)
Q Consensus 682 ~~~~~~~~~~~H~p~~~m~~~a~~~l~~~e~~~~~~~~~~~~~~~~~~~~~~kv~psl~~~~~vGN~YTaSlyl~L~SlL 761 (945)
...+.-||++.|.+...+....-..++ ...+..+-.+......++||++++|.++.|...+
T Consensus 220 l~~~did~~~~h~~~~~~~~~~e~~~~-------------------~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~ 280 (332)
T cd00825 220 LTVWDIDYLVAHGTGTPIGDVKELKLL-------------------RSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAV 280 (332)
T ss_pred CCHhHCCEEEccCCCCCCCCHHHHHHH-------------------HHHhCCCCceeECCCcccccchhHhHHHHHHHHH
Confidence 333455789999888665433322221 0011110112333558999999999999999987
Q ss_pred ccCCccc-----------------------cCCCcEEEEEecCCCcc
Q psy11265 762 IQTPWER-----------------------LQGMSRIGLFSYGSDNI 785 (945)
Q Consensus 762 ~~~~~~~-----------------------L~G~~rI~l~s~GsG~~ 785 (945)
..-.... -+| ++++++++|.|-.
T Consensus 281 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~G~Gg~ 326 (332)
T cd00825 281 LMLEHGFIPPSIHIEELDEAGLNIVTETTPREL-RTALLNGFGLGGT 326 (332)
T ss_pred HHHhcCccCCCCCCCCCCcccCcccCCCCCCCC-CEEEEeeecCCCe
Confidence 5321111 157 9999999999854
No 97
>KOG0553|consensus
Probab=92.16 E-value=0.077 Score=58.72 Aligned_cols=40 Identities=40% Similarity=0.493 Sum_probs=35.3
Q ss_pred cCHHHhhhccchhhHhcccccccccHHHHHHHHHHHHHHH
Q psy11265 428 LTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYL 467 (945)
Q Consensus 428 ms~eEkl~~a~~~Ke~GN~~fK~g~y~~A~~kY~rAl~~L 467 (945)
.+++|-.+.|+.+|.+||.+.+.++|++|+.+|.+|+.+.
T Consensus 72 ~~~~e~~~~AE~LK~eGN~~m~~~~Y~eAv~kY~~AI~l~ 111 (304)
T KOG0553|consen 72 LTPEEDKALAESLKNEGNKLMKNKDYQEAVDKYTEAIELD 111 (304)
T ss_pred cChHhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 3444777889999999999999999999999999999854
No 98
>PLN02192 3-ketoacyl-CoA synthase
Probab=91.94 E-value=0.1 Score=62.31 Aligned_cols=49 Identities=20% Similarity=0.171 Sum_probs=39.0
Q ss_pred hchhhhhccccCcccchhHHHHHHHHhccCCccccCCCcEEEEEecCCCccc
Q psy11265 735 TKPGLYLANLIGNMYTPSLYGCLVSLLIQTPWERLQGMSRIGLFSYGSDNIK 786 (945)
Q Consensus 735 v~psl~~~~~vGN~YTaSlyl~L~SlL~~~~~~~L~G~~rI~l~s~GsG~~~ 786 (945)
++++...=.+.||+-++|+++.|.-++.....+ +| +||.+++||+|-..
T Consensus 426 ~e~sr~tL~rfGNTSSaSI~~aL~~~eakgrik--~G-DrVl~iaFGsGf~~ 474 (511)
T PLN02192 426 MEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIK--KG-DRTWQIAFGSGFKC 474 (511)
T ss_pred hhHHHHHHhHcCChHHhHHHHHHHHHHHcCCCC--CC-CEEEEEEEcchHhh
Confidence 445544458999999999999999998765322 89 99999999999543
No 99
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=91.65 E-value=0.16 Score=58.86 Aligned_cols=108 Identities=9% Similarity=0.016 Sum_probs=73.2
Q ss_pred chhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCcccc
Q psy11265 39 YTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLY 118 (945)
Q Consensus 39 yt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~ly 118 (945)
|-+|.||..+..-...++...|++.|++..|++-++++++|+.| .++|. .+.|.+...........|+.. +.
T Consensus 6 ~IvG~g~t~~~~~~~~~s~~eL~~eAa~~Al~dAgl~~~dID~i-v~~~~----~~~~~~~~~~~~~va~~LGl~-~~-- 77 (386)
T PRK08313 6 AVLGTGQTKYVAKRQDVSMAGLVREAIDRALADAGLTWDDIDAV-VVGKA----PDFFEGVMMPELFLADALGAT-GK-- 77 (386)
T ss_pred EEEEeecCCcCccCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEecc----ccccccccCchHHHHHhcCCC-CC--
Confidence 56799999863333567899999999999999999999999988 66652 122322111112222344442 12
Q ss_pred ccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 119 KAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 119 k~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
.++++..+|-++..+ ++.|...|+ ++ .-..+|| +++
T Consensus 78 ------~~~~v~~~casg~~a-l~~A~~~I~--sG--~~~~vLVvg~e 114 (386)
T PRK08313 78 ------PLIRVHTAGSVGGST-AVVAASLVQ--SG--VYRRVLAVAWE 114 (386)
T ss_pred ------ceEEEeccCHHHHHH-HHHHHHHHH--CC--CCCEEEEEEEE
Confidence 245777789988888 888888886 33 4577887 765
No 100
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=91.05 E-value=0.14 Score=57.21 Aligned_cols=98 Identities=13% Similarity=0.088 Sum_probs=64.2
Q ss_pred hccCCccccCCCCCccHHHHHHHHHHHHHHhccCC----HHhhcccccccCCccccccccccc-----------------
Q psy11265 41 IGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELD----YAQIGQLLQVESPEEYEQESWQLT----------------- 99 (945)
Q Consensus 41 ~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~----~~~Ig~l~~v~Te~~~~~s~wd~s----------------- 99 (945)
+|+|+. ...|++.|+++.|++-+++ +++|+.| .++|..-. ..|...
T Consensus 5 ~g~g~~----------~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~i-i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 71 (332)
T cd00825 5 TGLGSY----------VSILGFEAAERAIADAGLSREYQKNPIVGV-VVGTGGGS--PRFQVFGADAMRAVGPYVVTKAM 71 (332)
T ss_pred EcccHH----------HHHHHHHHHHHHHHHcCCCccccCCCCEEE-EEEeCCcc--HHHHhhhhccccccCcchhhccc
Confidence 367776 7889999999999999999 8899888 67765100 000000
Q ss_pred -chhhhhhcccccccCccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 100 -EAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 100 -~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
..........+...|.+ +.+..+|.+++.| |..|..+|+ + +.-..+|| ++|.
T Consensus 72 ~~~~a~~ia~~lgl~g~~----------~~v~~~cas~~~a-l~~A~~~i~--~--g~~~~~Lv~~~d~ 125 (332)
T cd00825 72 FPGASGQIATPLGIHGPA----------YDVSAACAGSLHA-LSLAADAVQ--N--GKQDIVLAGGSEE 125 (332)
T ss_pred chHHHHHHHHHhCCCCCc----------cccccHhHHHHHH-HHHHHHHHH--c--CCCCEEEEecccc
Confidence 00001111233333333 5667899999999 889999996 3 34578888 8774
No 101
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=90.99 E-value=0.2 Score=57.98 Aligned_cols=107 Identities=12% Similarity=0.048 Sum_probs=71.7
Q ss_pred chhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCcccc
Q psy11265 39 YTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLY 118 (945)
Q Consensus 39 yt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~ly 118 (945)
|-+|.|+...+-. ..+....|++.|++.+|++.+|++++|+.+ .+++.... .. ...........++..+..
T Consensus 4 ~IvG~g~t~~~~~-~~~~~~eLa~~A~~~AL~dAgi~~~dID~v-i~g~~~~~---~~--~~~~a~~v~~~lGl~~~~-- 74 (385)
T PRK12578 4 AVIGVGNSKFGRR-DDVSVQELAWESIKEALNDAGVSQTDIELV-VVGSTAYR---GI--ELYPAPIVAEYSGLTGKV-- 74 (385)
T ss_pred EEEeecccceeec-CCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEecccc---cc--cCChHHHHHHHhCCCCCC--
Confidence 4578898885553 457789999999999999999999999988 67765110 00 000111112233332211
Q ss_pred ccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 119 KAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 119 k~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
.+++-.+|-++..| |..|...|+ ++ ....+|| ++|.
T Consensus 75 -------~~~v~~~casg~~a-l~~A~~~I~--sG--~~~~vLvvg~e~ 111 (385)
T PRK12578 75 -------PLRVEAMCATGLAA-SLTAYTAVA--SG--LVDMAIAVGVDK 111 (385)
T ss_pred -------eeEEeccCHHHHHH-HHHHHHHHH--CC--CCCEEEEEEEee
Confidence 24666799999999 888888886 33 3467887 7765
No 102
>PLN02854 3-ketoacyl-CoA synthase
Probab=90.80 E-value=0.13 Score=61.75 Aligned_cols=50 Identities=20% Similarity=0.189 Sum_probs=39.4
Q ss_pred hchhhhhccccCcccchhHHHHHHHHhccCCccccCCCcEEEEEecCCCcccc
Q psy11265 735 TKPGLYLANLIGNMYTPSLYGCLVSLLIQTPWERLQGMSRIGLFSYGSDNIKA 787 (945)
Q Consensus 735 v~psl~~~~~vGN~YTaSlyl~L~SlL~~~~~~~L~G~~rI~l~s~GsG~~~~ 787 (945)
.+++...=.+.||+-++|+++.|.-++.....+ +| +||.+++||+|-.-.
T Consensus 438 ~e~sr~tL~rfGNTSSASI~~~L~~~~~kGrik--~G-D~Vl~iaFGsGft~~ 487 (521)
T PLN02854 438 MEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVS--AG-DRVWQIAFGSGFKCN 487 (521)
T ss_pred ccchHHHhhhcCChHhhHHHHHHHHHHHcCCCC--CC-CEEEEEEEchhhhhh
Confidence 445544447889999999999999998764322 89 999999999996543
No 103
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=90.42 E-value=0.34 Score=56.19 Aligned_cols=106 Identities=9% Similarity=0.005 Sum_probs=69.3
Q ss_pred hccCCccccCCC---CCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccc
Q psy11265 41 IGLGQAKMGFCS---DLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTL 117 (945)
Q Consensus 41 ~GLGq~~m~~~~---~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~l 117 (945)
+|.|+...+--. ..++...|++.|++++|++.++++++|+.| .+++.. ..++.... .......++..++.
T Consensus 3 vg~~~Tpf~r~~~~~~~~~~~~La~~A~~~AL~dAgl~~~dID~v-i~~~~~----~~~~~~~~-a~~v~~~lGl~~~~- 75 (386)
T cd00751 3 VSAVRTPIGRFGGALKDVSADDLGAAVIKALLERAGLDPEEVDDV-IMGNVL----QAGEGQNP-ARQAALLAGLPESV- 75 (386)
T ss_pred EEeecCCccCCCCCCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEE-EEEecc----CCCCCChH-HHHHHHHcCCCCCC-
Confidence 566666654322 247899999999999999999999999988 676541 11221111 11111233433212
Q ss_pred cccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 118 YKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 118 yk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
-.+++-.+|-++..+ |..|..+|+ ++ .-..+|| +++
T Consensus 76 -------~~~~v~~~c~s~~~a-l~~A~~~I~--sG--~~~~vLv~g~e 112 (386)
T cd00751 76 -------PATTVNRVCGSGLQA-VALAAQSIA--AG--EADVVVAGGVE 112 (386)
T ss_pred -------chhhhccccHHHHHH-HHHHHHHHH--CC--CCCeEEEeeee
Confidence 246778899999999 888999996 33 3467787 655
No 104
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=89.32 E-value=0.43 Score=55.42 Aligned_cols=107 Identities=10% Similarity=0.033 Sum_probs=68.5
Q ss_pred hccCCccccCCC---CCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccc
Q psy11265 41 IGLGQAKMGFCS---DLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTL 117 (945)
Q Consensus 41 ~GLGq~~m~~~~---~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~l 117 (945)
+|.|++.++--+ ..++...|++.|++++|++.++++++|+.+ .+++... ..+. ..........++...++
T Consensus 2 vG~~~tp~~~~~g~~~~~t~~~La~~A~~~Al~dAgl~~~dID~v-v~g~~~~----~~~~-~~~a~~va~~lGl~~~~- 74 (386)
T TIGR01930 2 VAAARTPIGKFGGSLKDVSAEDLGAAVIKELLERNPLDPELIDDV-IFGNVLQ----AGEQ-QNIARQAALLAGLPESV- 74 (386)
T ss_pred cceecCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEeccC----CCCC-ChHHHHHHHHcCCCCCc-
Confidence 466777654321 248899999999999999999999999988 6765410 0100 00011111233433222
Q ss_pred cccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 118 YKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 118 yk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
-.+++-.+|-++..+ +..|...|+ ++ .-..+|| +++.
T Consensus 75 -------~~~~v~~~Casg~~a-l~~A~~~I~--sG--~~~~vLv~g~e~ 112 (386)
T TIGR01930 75 -------PAYTVNRQCASGLQA-VILAAQLIR--AG--EADVVVAGGVES 112 (386)
T ss_pred -------eeeeecchhhHHHHH-HHHHHHHHH--CC--CCCEEEEEEehh
Confidence 235666899999999 888899996 43 3467787 6563
No 105
>PLN02854 3-ketoacyl-CoA synthase
Probab=88.97 E-value=0.29 Score=58.75 Aligned_cols=141 Identities=11% Similarity=0.115 Sum_probs=90.9
Q ss_pred CCCcccceeeeeeecCCc--cccHHHHHhhcCCCcccch-------------hccCCccccCCC-------------CCc
Q psy11265 4 QWPENVGILGIEFYFPSQ--YVDQTELEKHDQVSAGKYT-------------IGLGQAKMGFCS-------------DLE 55 (945)
Q Consensus 4 ~~~~~VGI~ai~~y~p~~--yvd~~~L~~~~gv~~~Kyt-------------~GLGq~~m~~~~-------------~~E 55 (945)
++|..|-..+-+-|-|+- -|+.+.+-++-... |+|+ -|||++. .+++ .+|
T Consensus 109 ~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~f~~~~~~~sg~g~~t-y~P~~~~~~~~~~~~~~~r~ 186 (521)
T PLN02854 109 KRSKPVYLVDFACYKPEDERKISVDSFLTMTEEN-GSFEDETVQFQRRISTRSGLGDET-YLPRGITSRPPNLCMEEARA 186 (521)
T ss_pred cCCCcEEEEeeeeecCCccccccHHHHHHHHHHc-CCCCHHHHHHHHHHHHhcCCCCcc-ccCccccCCCCcchHHHHHH
Confidence 457778888888888764 34444433331110 3332 4788765 3322 122
Q ss_pred cHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhh-hhhh
Q psy11265 56 DINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKY-STAL 134 (945)
Q Consensus 56 Divsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k-~acy 134 (945)
-.-..--.|+..||++.+++|++|+.| +|++- ....+....+.....|+..++. .++++- -+|.
T Consensus 187 ea~~v~~~~~~~lL~kaGi~p~dID~L-Iv~cS------~~~p~PSlAa~I~n~LGlr~~i--------~afdLsgmGCS 251 (521)
T PLN02854 187 EAEAVMFGALDSLFSKTGVKPRDIGIL-IVNCS------LFNPTPSLSAMIVNHYKLRTDI--------KSYNLGGMGCS 251 (521)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEE-EEECC------CCCCCCCHHHHHHHHhCCCCCc--------eEEecccchhh
Confidence 233334467889999999999999998 66432 1222333333444566766666 678888 6999
Q ss_pred hHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 135 GYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 135 g~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
|+..+ |..|.++++. ++.+++|| ++++
T Consensus 252 ggl~a-L~lA~~lL~~----~~~~~aLVVstE~ 279 (521)
T PLN02854 252 AGLIS-IDLANDLLKA----NPNSYAVVVSTEN 279 (521)
T ss_pred hHHHH-HHHHHHHHHh----CCCCeEEEEEEee
Confidence 99999 8888899962 37899998 8876
No 106
>PLN00415 3-ketoacyl-CoA synthase
Probab=88.86 E-value=0.33 Score=57.47 Aligned_cols=52 Identities=19% Similarity=0.179 Sum_probs=42.6
Q ss_pred hhhchhhhhccccCcccchhHHHHHHHHhccCCccccCCCcEEEEEecCCCcccc
Q psy11265 733 RLTKPGLYLANLIGNMYTPSLYGCLVSLLIQTPWERLQGMSRIGLFSYGSDNIKA 787 (945)
Q Consensus 733 ~kv~psl~~~~~vGN~YTaSlyl~L~SlL~~~~~~~L~G~~rI~l~s~GsG~~~~ 787 (945)
.+++||-..=++-|||=++|+|.-|.-++.....+ +| +|+.+++||+|-..+
T Consensus 382 ~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~~~~~--~G-drvl~iaFGpGf~~e 433 (466)
T PLN00415 382 FDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVK--RG-DRVWQLAFGSGFKCN 433 (466)
T ss_pred HHHHHHHHHHHHhCCchhhhHHHHHHHHHhhccCC--CC-CEEEEEEEcCcchhh
Confidence 55777777779999999999999999998654322 89 999999999995444
No 107
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=88.22 E-value=0.64 Score=54.17 Aligned_cols=108 Identities=6% Similarity=-0.045 Sum_probs=71.4
Q ss_pred chhccCCccccCCC---CCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCc
Q psy11265 39 YTIGLGQAKMGFCS---DLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGN 115 (945)
Q Consensus 39 yt~GLGq~~m~~~~---~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn 115 (945)
|-+|-|++.++=-. ..+++..|+..|++++|++.+++|++|+.+ .+++..- ..++..+-. .....++.+.+
T Consensus 5 ~Ivg~~rTpfg~~~g~~~~~~~~eLa~~A~~~aL~~agl~~~dID~v-i~g~~~~----~~~~~~~~~-~~~~~~Gl~~~ 78 (393)
T PRK08235 5 VIVSAARTPFGKFGGSLKDVKATELGGIAIKEALERANVSAEDVEEV-IMGTVLQ----GGQGQIPSR-QAARAAGIPWE 78 (393)
T ss_pred EEEecCcCCccCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEeccc----CCCCCCHHH-HHHHHcCCCCC
Confidence 55677777754211 357899999999999999999999999988 7876610 112211111 01122232222
Q ss_pred cccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 116 TLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 116 ~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
. -.+.+..+|-+|..| +..|...|+ ++ ....+|| +++
T Consensus 79 ~--------p~~~V~~~CaSg~~A-l~~A~~~I~--sG--~~d~vLvvG~E 116 (393)
T PRK08235 79 V--------QTETVNKVCASGLRA-VTLADQIIR--AG--DASVIVAGGME 116 (393)
T ss_pred c--------ceeehhhhhhHHHHH-HHHHHHHHH--CC--CCCEEEEEeee
Confidence 2 346788899999999 888888886 43 3467787 666
No 108
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=87.90 E-value=0.51 Score=55.01 Aligned_cols=110 Identities=11% Similarity=0.036 Sum_probs=72.7
Q ss_pred ccchhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCcc
Q psy11265 37 GKYTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNT 116 (945)
Q Consensus 37 ~Kyt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~ 116 (945)
.-|-+|.|+...+-. ..++...|++.|+++.|++.++++++|+.+ .+++. ...|++...........++..+ .
T Consensus 10 ~vaIvG~g~t~~~~~-~~~~~~~L~~~A~~~Al~dagl~~~dID~~-i~~~~----~~~~~~~~~~a~~l~~~lG~~~-~ 82 (392)
T PRK06065 10 RVAVIGAGLTLFRRR-LLETPQELAWEAASKALDEAGLELKDIDCV-VIGSA----PDAFDGVHMKGEYLSHGSGGIR-K 82 (392)
T ss_pred ceEEEEecccCCcCC-CCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEecc----CCcccccccHHHHHHHHcCCCC-C
Confidence 347789999986664 457899999999999999999999999988 67652 1234332212211212222211 1
Q ss_pred ccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 117 LYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 117 lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
-.+.+..+|-+|..+ +..|...|+ ++ .-..+|| .++.
T Consensus 83 --------~~~~V~~~gasG~~a-l~~A~~~I~--sG--~ad~vLVvg~e~ 120 (392)
T PRK06065 83 --------PVSRVYVGGATGVMT-AIAGWYHVA--SG--LCQKVLAVAEEK 120 (392)
T ss_pred --------CeEEEecCchhHHHH-HHHHHHHHh--CC--CCCEEEEEEeec
Confidence 123455578888888 888888886 43 3477887 6654
No 109
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=87.74 E-value=0.47 Score=54.42 Aligned_cols=105 Identities=12% Similarity=0.003 Sum_probs=68.1
Q ss_pred hccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCcccccc
Q psy11265 41 IGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKA 120 (945)
Q Consensus 41 ~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~ 120 (945)
+|+||...+--. ..+...|++.|++..|++.++++++|+.+ .+++-. .+.............++.. +.
T Consensus 1 vG~g~t~~~~~~-~~~~~eL~~~A~~~Al~dagl~~~~Id~v-i~g~~~-----~~~~~~~~a~~va~~lGl~-~~---- 68 (375)
T cd00829 1 VGVGMTPFGRRS-DRSPLELAAEAARAALDDAGLEPADIDAV-VVGNAA-----GGRFQSFPGALIAEYLGLL-GK---- 68 (375)
T ss_pred CeeeecCcccCC-CCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEeccc-----ccccccchHHHHHHHcCCC-Cc----
Confidence 477888765433 67899999999999999999999999988 666541 1100000111111223332 22
Q ss_pred CcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 121 GNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 121 ~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
..+.+..+|-++..+ +..|...|+ ++ ....+|| +++.
T Consensus 69 ----~~~~v~~~c~sg~~a-l~~Aa~~I~--sG--~~~~vlv~g~e~ 106 (375)
T cd00829 69 ----PATRVEAAGASGSAA-VRAAAAAIA--SG--LADVVLVVGAEK 106 (375)
T ss_pred ----ceeeEeCccHHHHHH-HHHHHHHHH--hC--CCCEEEEEEEee
Confidence 335667789999999 888888886 33 3466777 6553
No 110
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=87.31 E-value=0.54 Score=54.51 Aligned_cols=109 Identities=11% Similarity=0.008 Sum_probs=69.9
Q ss_pred chhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCcccc
Q psy11265 39 YTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLY 118 (945)
Q Consensus 39 yt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~ly 118 (945)
+-+|.||..++= ...++...|++.|++++|++.++++++|+.+ .+++.. ...|+............++.. +.
T Consensus 5 ~IvG~~~tp~~~-~~~~~~~eLa~~a~~~Al~dagl~~~~Id~v-i~g~~~---~~~~~~~~~~a~~va~~lGl~-~~-- 76 (389)
T PRK06064 5 AIIGVGQTKFGE-LWDVSLRDLAVEAGLEALEDAGIDGKDIDAM-YVGNMS---AGLFVSQEHIAALIADYAGLA-PI-- 76 (389)
T ss_pred EEEEccccccee-cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEecc---cccccccccHHHHHHHHcCCC-CC--
Confidence 456888877542 2457899999999999999999999999988 665530 011211111111112233332 11
Q ss_pred ccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 119 KAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 119 k~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
-.+.+-.+|-++..+ +..|..+|+ ++ .-..+|| +++.
T Consensus 77 ------~~~~v~~aCasg~~a-i~~A~~~I~--sG--~~~~vLv~G~e~ 114 (389)
T PRK06064 77 ------PATRVEAACASGGAA-LRQAYLAVA--SG--EADVVLAAGVEK 114 (389)
T ss_pred ------CeeEEeCCcHHHHHH-HHHHHHHHH--CC--CCCEEEEEEEEe
Confidence 124566789999999 899999997 33 3467788 6654
No 111
>KOG0551|consensus
Probab=87.12 E-value=0.35 Score=54.34 Aligned_cols=76 Identities=14% Similarity=0.223 Sum_probs=55.1
Q ss_pred ccCHHHhhhccchhhHhcccccccccHHHHHHHHHHHHHHHHhhhhccccccccc--CCCCCCCCCccccccccceeecc
Q psy11265 427 QLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLKQTFVNRTV--KPPIMSHQWPENVGILGIEFYFP 504 (945)
Q Consensus 427 ~ms~eEkl~~a~~~Ke~GN~~fK~g~y~~A~~kY~rAl~~Le~~~~~e~~~~~~l--~~~~~t~~~~~~vGI~ai~~Y~P 504 (945)
+-+++| .|...|++||++||.++|+.|...|.++|+- .-..|+++.+| |.+ |-++|+.
T Consensus 74 E~ep~E---~Aen~KeeGN~~fK~Kryk~A~~~Yt~Glk~----kc~D~dlnavLY~NRA-------------Aa~~~l~ 133 (390)
T KOG0551|consen 74 EGEPHE---QAENYKEEGNEYFKEKRYKDAVESYTEGLKK----KCADPDLNAVLYTNRA-------------AAQLYLG 133 (390)
T ss_pred cCChHH---HHHHHHHHhHHHHHhhhHHHHHHHHHHHHhh----cCCCccHHHHHHhhHH-------------HHHHHHH
Confidence 344444 7899999999999999999999999999982 22234444333 222 4567777
Q ss_pred ccccchhHhhhhcCcCcc
Q psy11265 505 SQYVDQTELEKHDQVSAG 522 (945)
Q Consensus 505 ~~~l~~~el~~~~g~d~g 522 (945)
.++-.+.+-.+++-.+|.
T Consensus 134 NyRs~l~Dcs~al~~~P~ 151 (390)
T KOG0551|consen 134 NYRSALNDCSAALKLKPT 151 (390)
T ss_pred HHHHHHHHHHHHHhcCcc
Confidence 777777777777777665
No 112
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=86.58 E-value=0.68 Score=53.93 Aligned_cols=109 Identities=11% Similarity=0.026 Sum_probs=71.7
Q ss_pred chhccCCccccCCC---CCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCc
Q psy11265 39 YTIGLGQAKMGFCS---DLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGN 115 (945)
Q Consensus 39 yt~GLGq~~m~~~~---~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn 115 (945)
|-+|.|++.++=-. ..+....|+..|++.+|++.+++|++|+.+ .+++.. ..+++... .......++..+.
T Consensus 5 ~Ivg~~rTpfgk~~g~~~~~~~~~La~~A~~~AL~~agl~~~dID~v-i~g~~~----~~~~~~~~-a~~va~~lGl~~~ 78 (393)
T PRK05656 5 VIVAATRTAIGSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEV-ILGQVL----TAGAGQNP-ARQAAIKAGLPHS 78 (393)
T ss_pred EEEEcccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEEec----CCCCCCcH-HHHHHHHcCCCCC
Confidence 55678888765321 347789999999999999999999999988 787761 01111110 1111123333221
Q ss_pred cccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 116 TLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 116 ~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
. -.+.+..+|-++..+ +..|...|+ ++ ....+|| +++.
T Consensus 79 ~--------p~~~V~~~Casg~~a-i~~A~~~I~--sG--~~d~vLv~G~E~ 117 (393)
T PRK05656 79 V--------PAMTLNKVCGSGLKA-LHLAAQAIR--CG--DAEVIIAGGQEN 117 (393)
T ss_pred c--------ceEEecccchhHHHH-HHHHHHHHH--cC--CCCEEEEEEEhh
Confidence 2 246777899999999 888888886 33 3456777 6653
No 113
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=86.21 E-value=1.3 Score=49.55 Aligned_cols=51 Identities=24% Similarity=0.273 Sum_probs=40.7
Q ss_pred hchhhhhccccCcccchhHHHHHHHHhccCCccccCCCcEEEEEecCCCcccccc
Q psy11265 735 TKPGLYLANLIGNMYTPSLYGCLVSLLIQTPWERLQGMSRIGLFSYGSDNIKALF 789 (945)
Q Consensus 735 v~psl~~~~~vGN~YTaSlyl~L~SlL~~~~~~~L~G~~rI~l~s~GsG~~~~~~ 789 (945)
.+.|-..=++.|||-++|+..-|=-.|+++. + +| .|-+++.+|-|-.++.-
T Consensus 298 l~~s~~~L~~~GNMSSatvLfVL~d~l~~~~-~--~g-~~Gl~~A~GPGf~sElv 348 (356)
T COG3424 298 LELSWDVLREYGNMSSATVLFVLEDTLQKAP-K--SG-SRGLMFAMGPGFCSELV 348 (356)
T ss_pred HHHHHHHHHHhCCccchhhHHHHHHHHHhcC-C--CC-cceeeeecCCcceeeee
Confidence 3333344489999999999999999999863 2 68 89999999999887754
No 114
>PRK09051 beta-ketothiolase; Provisional
Probab=85.50 E-value=0.89 Score=53.05 Aligned_cols=109 Identities=12% Similarity=0.025 Sum_probs=69.5
Q ss_pred chhccCCccccCC---CCCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCc
Q psy11265 39 YTIGLGQAKMGFC---SDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGN 115 (945)
Q Consensus 39 yt~GLGq~~m~~~---~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn 115 (945)
|-+|-+++.++=. ...+....|+..|++.+|++.+++|++|+.+ .+++-.. ....|-... . .....++...+
T Consensus 6 ~Ivg~~rtp~g~~~g~~~~~~~~eL~~~A~~~AL~~agi~~~dID~v-i~g~~~~-~~~~~~~~a--~-~~~~~~Gl~~~ 80 (394)
T PRK09051 6 VVVSGVRTAIGTFGGSLKDVAPTDLGATVVREALARAGVDPDQVGHV-VFGHVIP-TEPRDMYLS--R-VAAINAGVPQE 80 (394)
T ss_pred EEEecccCCccCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEE-EEeeecc-ccCCCccHH--H-HHHHHcCCCCC
Confidence 4556666654321 1466889999999999999999999999999 7776511 000111110 0 01122233222
Q ss_pred cccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 116 TLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 116 ~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
. -++.+-.+|-++..| +..|...|+ ++ .-..+|| +++
T Consensus 81 ~--------p~~~V~~aCaSg~~A-l~~A~~~I~--sG--~~d~vLvvG~E 118 (394)
T PRK09051 81 T--------PAFNVNRLCGSGLQA-IVSAAQAIL--LG--DADVAIGGGAE 118 (394)
T ss_pred C--------ceEEecccchHHHHH-HHHHHHHHH--cC--CCCEEEEEeeh
Confidence 3 346778899999999 888888896 43 3467777 665
No 115
>PRK05790 putative acyltransferase; Provisional
Probab=85.49 E-value=0.87 Score=52.94 Aligned_cols=108 Identities=10% Similarity=0.007 Sum_probs=69.6
Q ss_pred chhccCCccccCCC---CCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhc-ccccccC
Q psy11265 39 YTIGLGQAKMGFCS---DLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASI-PKLKEDG 114 (945)
Q Consensus 39 yt~GLGq~~m~~~~---~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~-~~l~~~G 114 (945)
|-+|.|++.++--. ..+++..|++.|++.+|++.++++++|+.+ .+++... +. ++... .... ..++...
T Consensus 5 ~IvG~~~tp~~r~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~v-i~g~~~~---~~-~~~~~--~~~~~~~~gl~~ 77 (393)
T PRK05790 5 VIVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEV-IMGQVLQ---AG-AGQNP--ARQAALKAGLPV 77 (393)
T ss_pred EEEeeecCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeE-EEEEecC---CC-CCCcH--HHHHHHHcCCCC
Confidence 55788888876532 258899999999999999999999999988 6776410 00 01110 0101 1122211
Q ss_pred ccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 115 NTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 115 n~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
+. -.+.+-.+|-++..+ +..|...|+ ++ ....+|| ..|.
T Consensus 78 ~~--------~~~~v~~~Casg~~a-l~~A~~~I~--sG--~~d~vLv~G~e~ 117 (393)
T PRK05790 78 EV--------PALTINKVCGSGLKA-VALAAQAIR--AG--DADIVVAGGQES 117 (393)
T ss_pred CC--------ceeeecccchHHHHH-HHHHHHHHH--cC--CCCEEEEEeeec
Confidence 11 234566799999999 888889896 43 3467776 6653
No 116
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=84.96 E-value=1.1 Score=52.51 Aligned_cols=109 Identities=11% Similarity=0.032 Sum_probs=70.4
Q ss_pred chhccCCccccCCCC----CccHHHHHHHHHHHHHHhc-cCCHHhhcccccccCCcccccccccccchhhhhhccccccc
Q psy11265 39 YTIGLGQAKMGFCSD----LEDINSICLTVVSNLMKRY-ELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKED 113 (945)
Q Consensus 39 yt~GLGq~~m~~~~~----~EDivsla~~a~~~Ll~~~-~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~ 113 (945)
|-+|-+++.++=-.. .++...|+..|++.+|++. ++++++|+.+ ++++- ....+++..+-. -+...++..
T Consensus 9 ~Ivg~~rTpfg~~~~g~~~~~s~~eLa~~A~~~AL~~a~gl~~~dID~v-i~g~~---~~~~~~~~~~ar-~~~~~~Gl~ 83 (399)
T PRK09052 9 YIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDA-IVGCA---MPEAEQGLNVAR-IGALLAGLP 83 (399)
T ss_pred EEEEeccCCcccCCCCCCCCCCHHHHHHHHHHHHHHhccCcCHHHCCEE-EEEec---CCCCCCCchHHH-HHHHHcCCC
Confidence 556777776542111 4788999999999999996 9999999999 78753 111233221111 011122322
Q ss_pred CccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 114 GNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 114 Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
... -.+.+-.+|-+|..| +..|...|+ ++ ....+|| +++
T Consensus 84 ~~~--------p~~~V~~aCaSg~~A-l~~A~~~I~--sG--~~d~vLv~G~E 123 (399)
T PRK09052 84 NSV--------GGVTVNRFCASGLQA-VAMAADRIR--VG--EADVMIAAGVE 123 (399)
T ss_pred CCC--------ceeeecchhhHHHHH-HHHHHHHHH--CC--CCCEEEEEEEe
Confidence 111 346788899999999 899999997 43 3467777 665
No 117
>PRK06059 lipid-transfer protein; Provisional
Probab=84.26 E-value=1.1 Score=52.24 Aligned_cols=107 Identities=12% Similarity=0.067 Sum_probs=70.7
Q ss_pred chhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCcccc
Q psy11265 39 YTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLY 118 (945)
Q Consensus 39 yt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~ly 118 (945)
|-+|.|++..+- ..++...|++.|++++|++.++++++|+.| .+++-.......| .........++..+ .
T Consensus 7 ~Ivg~~~t~~~r--~~~~~~~La~~A~~~Al~dAgl~~~dId~v-i~~~~~~~~~~~~----~~a~~va~~lG~~~-~-- 76 (399)
T PRK06059 7 YILGAGMHPWGK--WGRDFVEYGVVAARAALADAGLDWRDVQLV-VGADTIRNGYPGF----VAGATFAQALGWNG-A-- 76 (399)
T ss_pred EEEEecccccCC--CCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEeccCCccCCc----cHHHHHHHHhCCCC-C--
Confidence 556788877543 467889999999999999999999999988 5543210000011 01111223333322 2
Q ss_pred ccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 119 KAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 119 k~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
..+++..+|-++..+ |..|..+|+ ++ .-..+|| +++.
T Consensus 77 ------~~~~v~~~Casg~~a-l~~A~~~I~--sG--~~~~vLvvg~e~ 114 (399)
T PRK06059 77 ------PVSSSYAACASGSQA-LQSARAQIL--AG--LCDVALVVGADT 114 (399)
T ss_pred ------ceecccchhHHHHHH-HHHHHHHHH--CC--CCCEEEEEEEcc
Confidence 345777899999999 899999997 43 4577887 7664
No 118
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=83.93 E-value=0.97 Score=52.93 Aligned_cols=94 Identities=7% Similarity=-0.045 Sum_probs=63.4
Q ss_pred CCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCccccccccc-ccchhhhhhcccccccCccccccCcchhhhhhhh
Q psy11265 53 DLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQ-LTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYS 131 (945)
Q Consensus 53 ~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd-~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~ 131 (945)
..-....|+..|++.+|++.+++|++|+.+ ++|+-. ..++ +..+-.. +....+...+. .++.+-.
T Consensus 24 ~~~~~~dLa~~A~~~al~~agi~p~~ID~v-i~G~~~----~~~~~~~~~~r~-a~~~~Gl~~~~--------pa~~Vn~ 89 (402)
T PRK08242 24 HEVKPVRLAAGLLEALRDRNGLDTAAVDDV-VLGCVT----PVGDQGADIART-AVLAAGLPETV--------PGVQINR 89 (402)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHcCEE-EEEecC----CCccccccHHHH-HHHHcCCCCCC--------CeEEEcc
Confidence 345678899999999999999999999999 787761 0111 1111111 11222333333 5678889
Q ss_pred hhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 132 TALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 132 acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
+|-++..| +..|..+|+ ++ ....+|| +++
T Consensus 90 aCaSg~~A-i~~A~~~I~--sG--~~d~vLv~G~E 119 (402)
T PRK08242 90 FCASGLEA-VNLAAAKVR--SG--WDDLVIAGGVE 119 (402)
T ss_pred hhhhHHHH-HHHHHHHHH--cC--CCCEEEEEEEE
Confidence 99999999 898999997 33 3467777 655
No 119
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=83.60 E-value=1.5 Score=51.19 Aligned_cols=92 Identities=8% Similarity=-0.057 Sum_probs=60.4
Q ss_pred ccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhhhhh
Q psy11265 55 EDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTAL 134 (945)
Q Consensus 55 EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~acy 134 (945)
+-...|+..|++.+|++.+++|++|+.+ .+++.. ..|.+...-.......++.. +. -.+.+..+|-
T Consensus 21 ~~~~el~~~a~~~Al~~agl~p~dID~v-i~g~~~----~~~~g~~~~~~~~~~~lg~~-~~--------p~~~V~~~Ca 86 (393)
T cd00826 21 DLAHEAGAKAIAAALEPAGVAAGAVEEA-CLGQVL----GAGEGQNCAQQAAMHAGGLQ-EA--------PAIGMNNLCG 86 (393)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEEcc----CCcccCcHHHHHHHHcCCCC-CC--------cEEEecchhH
Confidence 4458899999999999999999999999 788661 11222111111111222221 12 3567888999
Q ss_pred hHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 135 GYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 135 g~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
++..+ +..|..+|+ ++ .-..+|| +++
T Consensus 87 sg~~a-l~~A~~~I~--sG--~~~~vlv~g~e 113 (393)
T cd00826 87 SGLRA-LALAMQLIA--GG--DANCILAGGFE 113 (393)
T ss_pred HHHHH-HHHHHHHHH--CC--CCCEEEEEeee
Confidence 99999 888899997 33 2356777 654
No 120
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=83.21 E-value=1.2 Score=51.92 Aligned_cols=110 Identities=14% Similarity=0.000 Sum_probs=69.1
Q ss_pred chhccCCccccC--CCCCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhc-ccccccCc
Q psy11265 39 YTIGLGQAKMGF--CSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASI-PKLKEDGN 115 (945)
Q Consensus 39 yt~GLGq~~m~~--~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~-~~l~~~Gn 115 (945)
+-+|.|+...+= ....+..-.|++.|++.+|++.+++|++|+.+ .++|.. ...+......-..+. ......|-
T Consensus 6 ~Ivg~~~t~~~r~~~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~v-i~g~~~---~~~~~~~~~~~~~~~~~~~~~~g~ 81 (403)
T PRK06289 6 WVLGGYQSDFARNWTKEGRDFADLTREVVDGTLAAAGVDADDIEVV-HVGNFF---GELFAGQGHLGAMPATVHPALWGV 81 (403)
T ss_pred EEEeCCcCccccccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEecc---ccccccccccchHHHHHhhcCCCC
Confidence 456777776542 11467889999999999999999999999988 677650 011111110000000 00111111
Q ss_pred cccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 116 TLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 116 ~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
..+.+..+|-++..| |..|...|+ ++ ....+|| ++|.
T Consensus 82 ---------~~~~v~~~Casg~~a-l~~Aa~~I~--sG--~~~~VLvvg~e~ 119 (403)
T PRK06289 82 ---------PASRHEAACASGSVA-TLAAMADLR--AG--RYDVALVVGVEL 119 (403)
T ss_pred ---------ceeecccccHHHHHH-HHHHHHHHH--cC--CCCEEEEEEEEe
Confidence 236777899999999 899999996 43 3467888 7664
No 121
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=83.02 E-value=0.98 Score=51.10 Aligned_cols=87 Identities=10% Similarity=0.008 Sum_probs=61.6
Q ss_pred ccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhhhhh
Q psy11265 55 EDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTAL 134 (945)
Q Consensus 55 EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~acy 134 (945)
+....|+..|+++.|++-++++++|+.+ .+++- ++ ..+..+.....|+. ..+++..||-
T Consensus 48 kAe~eLa~eAa~~ALekAGL~~~DID~I-IvGdl-------~~-Q~~~As~vA~~LGI------------P~fdV~~ACS 106 (327)
T TIGR02845 48 KAERKLMEDAVNLALKKANLKKDDVDFF-LAGDL-------LN-QIITANFVARDLGI------------PFLGLYGACS 106 (327)
T ss_pred hhHHHHHHHHHHHHHHHcCCCHHHCCEE-EEeCC-------CC-cccHHHHHHHHhCC------------CEEEEeccCH
Confidence 3567899999999999999999999888 67763 11 11111222233332 2268889999
Q ss_pred hHHHHHHhhccceEEeecccCCCcceee-ecccc
Q psy11265 135 GYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLSD 167 (945)
Q Consensus 135 g~t~alL~~a~~~i~v~~~~~~~~~~LV-asdia 167 (945)
++..| |..|..+|+ ++ ..+.+|| +|+..
T Consensus 107 Tf~~A-L~lAa~lI~--SG--~ad~VLVV~Ssh~ 135 (327)
T TIGR02845 107 TSMET-LALGAMLVD--GG--FADRVLAATSSHY 135 (327)
T ss_pred HHHHH-HHHHHHHHh--CC--CCCEEEEEEeccc
Confidence 99999 888888996 33 4578888 77653
No 122
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=82.92 E-value=1.5 Score=51.72 Aligned_cols=108 Identities=6% Similarity=-0.034 Sum_probs=69.0
Q ss_pred chhccCCccccCCC---CCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCc
Q psy11265 39 YTIGLGQAKMGFCS---DLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGN 115 (945)
Q Consensus 39 yt~GLGq~~m~~~~---~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn 115 (945)
|-+|.|++..+-.. ...+...|++.|++.+|++.++++++|+.+ .+++-. .+.............++.+.+
T Consensus 6 ~Ivg~~rTp~g~~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~v-i~g~~~-----~~~~~~~~a~~v~~~lGl~~~ 79 (426)
T PRK08170 6 YIVDGARTPFLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEV-ILGCAM-----PSPDEANIARVVALRLGCGEK 79 (426)
T ss_pred EEEecCCCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEecc-----CCCCcChHHHHHHHHhCcCCC
Confidence 55677887765421 135889999999999999999999999998 676541 111110111111223343221
Q ss_pred cccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 116 TLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 116 ~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
. -.+.+-.+|-++..+ +..|...|+ ++ ....+|| +++
T Consensus 80 ~--------p~~~v~~~CaSg~~a-l~~A~~~I~--sG--~~d~vLv~G~E 117 (426)
T PRK08170 80 V--------PAWTVQRNCASGMQA-LDSAAANIA--LG--RADLVLAGGVE 117 (426)
T ss_pred c--------eeeeccchhhHHHHH-HHHHHHHHH--CC--CCCEEEEEEEe
Confidence 2 234566789999999 888888886 33 3456777 655
No 123
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=82.60 E-value=1.3 Score=51.54 Aligned_cols=108 Identities=9% Similarity=0.085 Sum_probs=69.6
Q ss_pred chhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCc-ccccccccccchhhhhhcccccccCccc
Q psy11265 39 YTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPE-EYEQESWQLTEAEKLASIPKLKEDGNTL 117 (945)
Q Consensus 39 yt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~-~~~~s~wd~s~~d~sk~~~~l~~~Gn~l 117 (945)
|-+|.|++.++- ...++...|++.|++++|++.++++++|+.+ .+++.. .+....+..+. .+...+.. .
T Consensus 5 ~Ivg~g~tpfgr-~~~~~~~eL~~eA~~~AL~dAgl~~~dId~v-i~g~~~~~~~~~~~~~~~----~~~~~~gl---~- 74 (389)
T PRK07516 5 SIVGWAHTPFGK-LDAETLESLIVRVAREALAHAGIAAGDVDGI-FLGHFNAGFSPQDFPASL----VLQADPAL---R- 74 (389)
T ss_pred EEEeCCcceeee-cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEEecCCccccccchhH----HHHHhcCC---C-
Confidence 556788887664 3468889999999999999999999999988 676541 00000000000 00011111 1
Q ss_pred cccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 118 YKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 118 yk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
..-.+.+..+|-++..| +..|..+|+ ++ .-..+|| +.+.
T Consensus 75 -----~~p~~~v~~~CaSg~~A-l~~A~~~I~--sG--~~d~vLvvg~e~ 114 (389)
T PRK07516 75 -----FKPATRVENACATGSAA-VYAALDAIE--AG--RARIVLVVGAEK 114 (389)
T ss_pred -----CCceeeeccccHHHHHH-HHHHHHHHH--CC--CCCEEEEEEehh
Confidence 11345677899999999 888999997 33 3467777 6654
No 124
>PRK08304 stage V sporulation protein AD; Validated
Probab=82.41 E-value=0.99 Score=51.20 Aligned_cols=85 Identities=12% Similarity=0.035 Sum_probs=59.8
Q ss_pred cHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhhhhhh
Q psy11265 56 DINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALG 135 (945)
Q Consensus 56 Divsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~acyg 135 (945)
--..|+..|+++.|++.++++++|+.+ .+++.. +..+-.+.....|+. -.++++.||-+
T Consensus 55 AeseLa~eAa~~ALekAGI~~~DID~l-I~Gdll--------~Q~~sAs~vA~~LGI------------Pa~dV~gACST 113 (337)
T PRK08304 55 AERKMMEDAIQQALQKANLKKSDIDYL-LAGDLL--------NQIISANFAARELGI------------PFLGLYGACST 113 (337)
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCCEE-EEECCC--------CCcchHHHHHHHhCC------------cEEEEeccCHH
Confidence 456899999999999999999999988 777650 011111112222322 24688899999
Q ss_pred HHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 136 YLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 136 ~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
+..| |..|...|+ ++ ....+|| +|+.
T Consensus 114 ~~~A-L~lAa~lI~--SG--~ad~VLVV~Ssh 140 (337)
T PRK08304 114 MMES-LALGSMLID--GG--FADRVLAATSSH 140 (337)
T ss_pred HHHH-HHHHHHHHh--cC--CCCEEEEEEcch
Confidence 9999 888888886 32 4578888 6664
No 125
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=81.70 E-value=1.4 Score=51.33 Aligned_cols=94 Identities=9% Similarity=-0.037 Sum_probs=62.8
Q ss_pred CccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhhhh
Q psy11265 54 LEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTA 133 (945)
Q Consensus 54 ~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~ac 133 (945)
.+-...|+..|++.+|++.+++|++|+.+ .+|+- ....++++. ........++.+.+. .++.+..+|
T Consensus 24 ~~~~~dL~~~A~~~aL~~agi~~~~ID~v-i~G~~---~~~~~~~~~-~a~~i~~~lGl~~~~--------p~~~V~~aC 90 (392)
T PRK07108 24 MTHGATLGGHVVQHAVERAKLDPAEVEDV-IMGCA---NPEGATGAN-IARQIALRAGLPVTV--------PGMTVNRFC 90 (392)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCcE-EEEEe---ecccccccH-HHHHHHHHcCCCCCC--------ceeeecchh
Confidence 45578999999999999999999999998 77754 112232221 111111222333233 457888999
Q ss_pred hhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 134 LGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 134 yg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
-++..| +..|...|+ ++ ...-+|| +.+
T Consensus 91 aSg~~A-l~~A~~~I~--sG--~~d~vlagGvE 118 (392)
T PRK07108 91 SSGLQT-IALAAQRVI--AG--EGDVFVAGGVE 118 (392)
T ss_pred hHHHHH-HHHHHHHHH--CC--CCCEEEEEEEe
Confidence 999999 899999996 33 3456676 554
No 126
>PF07719 TPR_2: Tetratricopeptide repeat; InterPro: IPR013105 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ]. It mediates protein-protein interactions and the assembly of multiprotein complexes []. The TPR motif consists of 3-16 tandem-repeats of 34 amino acids residues, although individual TPR motifs can be dispersed in the protein sequence. Sequence alignment of the TPR domains reveals a consensus sequence defined by a pattern of small and large amino acids. TPR motifs have been identified in various different organisms, ranging from bacteria to humans. Proteins containing TPRs are involved in a variety of biological processes, such as cell cycle regulation, transcriptional control, mitochondrial and peroxisomal protein transport, neurogenesis and protein folding. This repeat includes outlying Tetratricopeptide-like repeats (TPR) that are not matched by IPR001440 from INTERPRO.; PDB: 1XNF_B 3Q15_A 4ABN_A 1OUV_A 3U4T_A 3MA5_C 2KCV_A 2KCL_A 2XEV_A 3NF1_A ....
Probab=80.51 E-value=0.75 Score=33.40 Aligned_cols=31 Identities=23% Similarity=0.281 Sum_probs=27.8
Q ss_pred eehhhhhcccccchhHHHHhhhhhhccCCCC
Q psy11265 907 LLNYSQCKLDQKDYYSVIEHTTTVLTYDPEG 937 (945)
Q Consensus 907 ~lny~qc~l~~~~yy~v~~h~~~~l~~~~~~ 937 (945)
+.+.++|++.+|+|=+.++|....|+.+|+|
T Consensus 4 ~~~lg~~~~~~~~~~~A~~~~~~al~l~p~~ 34 (34)
T PF07719_consen 4 WYYLGQAYYQLGNYEEAIEYFEKALELDPNN 34 (34)
T ss_dssp HHHHHHHHHHTT-HHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHCcCC
Confidence 4578999999999999999999999999987
No 127
>PRK06158 thiolase; Provisional
Probab=79.91 E-value=2 Score=49.84 Aligned_cols=106 Identities=12% Similarity=0.094 Sum_probs=71.0
Q ss_pred cCCCcccchhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhccccc
Q psy11265 32 DQVSAGKYTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLK 111 (945)
Q Consensus 32 ~gv~~~Kyt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~ 111 (945)
|..+-.-+-+|.||...+- .+.++...|+..|+++.|++.++++++|+.+ .+++.. ..+. . ......++
T Consensus 4 ~~~~~~vaIvG~g~t~~~~-~~~~t~~eL~~eA~~~Al~dAgl~~~dID~i-v~~~~~----~~~~--~---~~la~~lG 72 (384)
T PRK06158 4 RFLRGRTAIVGAATAGLGE-APGLSAMELLAQAAHRALADAGLTMADVDGL-FTASPD----DALW--G---LSVAEYLG 72 (384)
T ss_pred cCCCCCEEEEEeeecccee-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEecCC----CCCc--H---HHHHHHcC
Confidence 3444333667999998653 3568899999999999999999999999988 677641 1111 1 11223343
Q ss_pred ccCccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee
Q psy11265 112 EDGNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV 162 (945)
Q Consensus 112 ~~Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV 162 (945)
..+ . ....+..+|-++..+ |..|...|+ ++ .-..+||
T Consensus 73 l~~-~--------~~~~~~~g~~s~~~a-l~~A~~~I~--sG--~~d~vLV 109 (384)
T PRK06158 73 IRP-R--------FVDGTMIGGSSFLAH-LLPAALALE--AG--LCDVALI 109 (384)
T ss_pred CCC-e--------eeccccCccHHHHHH-HHHHHHHHH--cC--CCCEEEE
Confidence 321 1 123455679999998 888888886 33 3467777
No 128
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=79.82 E-value=2.2 Score=49.78 Aligned_cols=108 Identities=7% Similarity=-0.054 Sum_probs=69.0
Q ss_pred chhccCCccccCCC---CCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCc
Q psy11265 39 YTIGLGQAKMGFCS---DLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGN 115 (945)
Q Consensus 39 yt~GLGq~~m~~~~---~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn 115 (945)
|-+|-|++.++=-. ...+...|+..|++.+|++.+++|++|+.+ .+|+-. ..+++..+-...+.. ++.+.+
T Consensus 10 ~Ivg~~rTpf~k~~g~~~~~~~~eL~~~a~~~aL~~Agi~~~dID~v-i~G~~~----~~~~~~~~~~~~~l~-ag~~~~ 83 (397)
T PRK06954 10 VIASAARTPMAAFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEV-VMGCVL----PAGQGQAPARQAALG-AGLPLS 83 (397)
T ss_pred EEEecccCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEE-EEEecC----CCccchHHHHHHHHc-CCCCCC
Confidence 55677777654211 456789999999999999999999999998 777431 011111111001111 122212
Q ss_pred cccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 116 TLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 116 ~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
. -++.+..+|-+|..| +..|...|+ ++ ....+|| +++
T Consensus 84 ~--------p~~~V~~aCaSG~~A-v~~A~~~I~--sG--~~d~vLv~G~E 121 (397)
T PRK06954 84 V--------GCTTVNKMCGSGMRA-AMFAHDMLV--AG--SVDVIVAGGME 121 (397)
T ss_pred c--------cEeeccccchHHHHH-HHHHHHHHH--CC--CCCEEEEEeee
Confidence 2 346788899999999 888999996 43 3456777 665
No 129
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=79.52 E-value=2.5 Score=49.51 Aligned_cols=108 Identities=8% Similarity=0.010 Sum_probs=68.9
Q ss_pred chhccCCccccCCC---CCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCc
Q psy11265 39 YTIGLGQAKMGFCS---DLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGN 115 (945)
Q Consensus 39 yt~GLGq~~m~~~~---~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn 115 (945)
|-+|-|++.++=-. ..+.+..|++.|++.+|++.++++++|+.+ .+++.. ..+....+- ......++...+
T Consensus 5 ~Ivg~~rTpfgk~~g~~~~~~~~eLa~~A~~~AL~~agl~~~dID~v-v~g~~~----~~~~~~~~a-~~va~~~Gl~~~ 78 (404)
T PRK06205 5 VICEPVRTPVGRFGGAFKDVPAEELAATVIRALVERTGIDPARIDDV-IFGQGY----PNGEAPAIG-RVAALDAGLPVT 78 (404)
T ss_pred EEEEeecCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEecc----CCCCCChHH-HHHHHHcCCCCC
Confidence 45666777654321 257899999999999999999999999998 777651 111111110 001112222212
Q ss_pred cccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 116 TLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 116 ~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
. -.+.+-.+|-++..| +..|...|+ ++ ....+|| +.+
T Consensus 79 ~--------p~~~V~~~CaSg~~A-l~~A~~~I~--sG--~~d~vLv~G~E 116 (404)
T PRK06205 79 V--------PGMQLDRRCGSGLQA-VITAAMQVQ--TG--AADVVIAGGAE 116 (404)
T ss_pred C--------ceeehhhhhhHHHHH-HHHHHHHHH--cC--CCCEEEEeeeh
Confidence 2 245777899999999 888889996 43 3456777 554
No 130
>PRK08256 lipid-transfer protein; Provisional
Probab=79.50 E-value=2.1 Score=49.74 Aligned_cols=105 Identities=9% Similarity=0.052 Sum_probs=68.1
Q ss_pred chhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCcccc
Q psy11265 39 YTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLY 118 (945)
Q Consensus 39 yt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~ly 118 (945)
+-+|.|++.++-.........|++.|++++|++.++++++|+.+ .+++. + .+ +.... .....++..| .
T Consensus 4 ~IvG~~~t~~~~~~~~~~~~~La~~A~~~Al~dAGl~~~dID~~-~~g~~-~--~~----~~~~~-~~~~~lGl~~-~-- 71 (391)
T PRK08256 4 FVAGVGMTPFEKPGASWDYPDMAAEAGRAALADAGIDYDAVQQA-YVGYV-Y--GD----STSGQ-RALYEVGMTG-I-- 71 (391)
T ss_pred EEEeccccccccCCCCCCHHHHHHHHHHHHHHHcCCChHHCCee-EEEEE-e--CC----cchhH-HHHHHcCCCC-C--
Confidence 45688888776322246788999999999999999999999887 66543 0 00 00000 0112233322 1
Q ss_pred ccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 119 KAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 119 k~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
..+.+-.+|-++..+ +..|...|+ ++ .-..+|| ++|.
T Consensus 72 ------~~~~v~~~caSg~~a-i~~A~~~I~--sG--~~d~vLv~g~e~ 109 (391)
T PRK08256 72 ------PIVNVNNNCSTGSTA-LFLARQAVR--SG--AADCALALGFEQ 109 (391)
T ss_pred ------CCcccccccHHHHHH-HHHHHHHHH--CC--CCCEEEEEEEee
Confidence 224566789999999 899999997 33 2356677 6654
No 131
>PF07719 TPR_2: Tetratricopeptide repeat; InterPro: IPR013105 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ]. It mediates protein-protein interactions and the assembly of multiprotein complexes []. The TPR motif consists of 3-16 tandem-repeats of 34 amino acids residues, although individual TPR motifs can be dispersed in the protein sequence. Sequence alignment of the TPR domains reveals a consensus sequence defined by a pattern of small and large amino acids. TPR motifs have been identified in various different organisms, ranging from bacteria to humans. Proteins containing TPRs are involved in a variety of biological processes, such as cell cycle regulation, transcriptional control, mitochondrial and peroxisomal protein transport, neurogenesis and protein folding. This repeat includes outlying Tetratricopeptide-like repeats (TPR) that are not matched by IPR001440 from INTERPRO.; PDB: 1XNF_B 3Q15_A 4ABN_A 1OUV_A 3U4T_A 3MA5_C 2KCV_A 2KCL_A 2XEV_A 3NF1_A ....
Probab=79.12 E-value=1.6 Score=31.63 Aligned_cols=28 Identities=25% Similarity=0.400 Sum_probs=23.8
Q ss_pred hhhHhcccccccccHHHHHHHHHHHHHH
Q psy11265 439 KLKEDGNTLYKAGNIQGALDKYSTALGY 466 (945)
Q Consensus 439 ~~Ke~GN~~fK~g~y~~A~~kY~rAl~~ 466 (945)
.....|..+++.|+|..|+..|++|+.+
T Consensus 3 ~~~~lg~~~~~~~~~~~A~~~~~~al~l 30 (34)
T PF07719_consen 3 AWYYLGQAYYQLGNYEEAIEYFEKALEL 30 (34)
T ss_dssp HHHHHHHHHHHTT-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 4556899999999999999999999974
No 132
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=78.61 E-value=2.1 Score=50.60 Aligned_cols=108 Identities=12% Similarity=-0.061 Sum_probs=71.6
Q ss_pred chhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCcccc
Q psy11265 39 YTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLY 118 (945)
Q Consensus 39 yt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~ly 118 (945)
|-+|.|++..+-.....+...|++.|++.+|++.++++++|+-+ .+++. .+.+++..+........++..+ .
T Consensus 19 aIvG~g~Tpfgr~~~~~~~~eL~~eA~~~Al~dagl~~~dID~v-v~~~~----~~~~~g~~~~~~~~~~~lGl~~-~-- 90 (430)
T PRK06365 19 YMVAAGVTKFDKASPYMDFRERVKKAFDYAMNDAGLTLADIDGS-VASYF----SDHFQRQLLAGIMVQDYLGLVP-K-- 90 (430)
T ss_pred EEEEeeecCccccCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEE-EEecc----cccccccchhhHHHHHhcCCCC-C--
Confidence 66789998877654567788999999999999999999999987 55543 1233332222211122333322 2
Q ss_pred ccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 119 KAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 119 k~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
-...+..+|-++..| +..|...|+ ++ ....+|| ..+
T Consensus 91 ------~~~~v~~~~aSg~~a-i~~A~~~I~--sG--~~~~vLv~G~e 127 (430)
T PRK06365 91 ------PSKRIEGGGATGGLA-FQAGYEEIA--SG--RMDCVAVYGFE 127 (430)
T ss_pred ------ceEEEeCCcHHHHHH-HHHHHHHHH--cC--CCCEEEEEEee
Confidence 223445689999999 888999997 43 3466777 543
No 133
>PF00515 TPR_1: Tetratricopeptide repeat; InterPro: IPR001440 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ]. It mediates protein-protein interactions and the assembly of multiprotein complexes []. The TPR motif consists of 3-16 tandem-repeats of 34 amino acids residues, although individual TPR motifs can be dispersed in the protein sequence. Sequence alignment of the TPR domains reveals a consensus sequence defined by a pattern of small and large amino acids. TPR motifs have been identified in various different organisms, ranging from bacteria to humans. Proteins containing TPRs are involved in a variety of biological processes, such as cell cycle regulation, transcriptional control, mitochondrial and peroxisomal protein transport, neurogenesis and protein folding. The X-ray structure of a domain containing three TPRs from protein phosphatase 5 revealed that TPR adopts a helix-turn-helix arrangement, with adjacent TPR motifs packing in a parallel fashion, resulting in a spiral of repeating anti-parallel alpha-helices []. The two helices are denoted helix A and helix B. The packing angle between helix A and helix B is ~24 degrees; within a single TPR and generates a right-handed superhelical shape. Helix A interacts with helix B and with helix A' of the next TPR. Two protein surfaces are generated: the inner concave surface is contributed to mainly by residue on helices A, and the other surface presents residues from both helices A and B. ; GO: 0005515 protein binding; PDB: 3SF4_C 2LNI_A 1ELW_A 2C0M_A 1FCH_B 3R9A_B 2J9Q_A 2C0L_A 1KT1_A 3FWV_A ....
Probab=77.84 E-value=0.79 Score=33.61 Aligned_cols=31 Identities=23% Similarity=0.379 Sum_probs=27.6
Q ss_pred eehhhhhcccccchhHHHHhhhhhhccCCCC
Q psy11265 907 LLNYSQCKLDQKDYYSVIEHTTTVLTYDPEG 937 (945)
Q Consensus 907 ~lny~qc~l~~~~yy~v~~h~~~~l~~~~~~ 937 (945)
+.|-+.|++.+++|=+.+++++..|+.+|+|
T Consensus 4 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~ 34 (34)
T PF00515_consen 4 YYNLGNAYFQLGDYEEALEYYQRALELDPDN 34 (34)
T ss_dssp HHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH
T ss_pred HHHHHHHHHHhCCchHHHHHHHHHHHHCcCC
Confidence 4577899999999999999999999999986
No 134
>PF00515 TPR_1: Tetratricopeptide repeat; InterPro: IPR001440 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ]. It mediates protein-protein interactions and the assembly of multiprotein complexes []. The TPR motif consists of 3-16 tandem-repeats of 34 amino acids residues, although individual TPR motifs can be dispersed in the protein sequence. Sequence alignment of the TPR domains reveals a consensus sequence defined by a pattern of small and large amino acids. TPR motifs have been identified in various different organisms, ranging from bacteria to humans. Proteins containing TPRs are involved in a variety of biological processes, such as cell cycle regulation, transcriptional control, mitochondrial and peroxisomal protein transport, neurogenesis and protein folding. The X-ray structure of a domain containing three TPRs from protein phosphatase 5 revealed that TPR adopts a helix-turn-helix arrangement, with adjacent TPR motifs packing in a parallel fashion, resulting in a spiral of repeating anti-parallel alpha-helices []. The two helices are denoted helix A and helix B. The packing angle between helix A and helix B is ~24 degrees; within a single TPR and generates a right-handed superhelical shape. Helix A interacts with helix B and with helix A' of the next TPR. Two protein surfaces are generated: the inner concave surface is contributed to mainly by residue on helices A, and the other surface presents residues from both helices A and B. ; GO: 0005515 protein binding; PDB: 3SF4_C 2LNI_A 1ELW_A 2C0M_A 1FCH_B 3R9A_B 2J9Q_A 2C0L_A 1KT1_A 3FWV_A ....
Probab=76.55 E-value=2.1 Score=31.31 Aligned_cols=28 Identities=29% Similarity=0.479 Sum_probs=23.8
Q ss_pred hhhHhcccccccccHHHHHHHHHHHHHH
Q psy11265 439 KLKEDGNTLYKAGNIQGALDKYSTALGY 466 (945)
Q Consensus 439 ~~Ke~GN~~fK~g~y~~A~~kY~rAl~~ 466 (945)
..-..|..++..|+|..|+..|++|+.+
T Consensus 3 ~~~~~g~~~~~~~~~~~A~~~~~~al~~ 30 (34)
T PF00515_consen 3 AYYNLGNAYFQLGDYEEALEYYQRALEL 30 (34)
T ss_dssp HHHHHHHHHHHTT-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 3456899999999999999999999985
No 135
>PF13176 TPR_7: Tetratricopeptide repeat; PDB: 3SF4_C 3RO3_A 3RO2_A.
Probab=74.69 E-value=2.2 Score=32.24 Aligned_cols=27 Identities=22% Similarity=0.393 Sum_probs=22.2
Q ss_pred hHhcccccccccHHHHHHHHHHHHHHH
Q psy11265 441 KEDGNTLYKAGNIQGALDKYSTALGYL 467 (945)
Q Consensus 441 Ke~GN~~fK~g~y~~A~~kY~rAl~~L 467 (945)
..-|+.+.+.|+|.+|+..|++||.+-
T Consensus 3 ~~Lg~~~~~~g~~~~Ai~~y~~aL~l~ 29 (36)
T PF13176_consen 3 NNLGRIYRQQGDYEKAIEYYEQALALA 29 (36)
T ss_dssp HHHHHHHHHCT-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhc
Confidence 346889999999999999999999643
No 136
>KOG4642|consensus
Probab=73.51 E-value=1.9 Score=46.76 Aligned_cols=33 Identities=33% Similarity=0.437 Sum_probs=29.6
Q ss_pred hhccchhhHhcccccccccHHHHHHHHHHHHHH
Q psy11265 434 LASIPKLKEDGNTLYKAGNIQGALDKYSTALGY 466 (945)
Q Consensus 434 l~~a~~~Ke~GN~~fK~g~y~~A~~kY~rAl~~ 466 (945)
-+.+.++|++||.+|..++|..|+..|.||+..
T Consensus 7 s~~a~qlkE~gnk~f~~k~y~~ai~~y~raI~~ 39 (284)
T KOG4642|consen 7 SESAEQLKEQGNKCFIPKRYDDAIDCYSRAICI 39 (284)
T ss_pred chHHHHHHhccccccchhhhchHHHHHHHHHhc
Confidence 345789999999999999999999999999873
No 137
>KOG0548|consensus
Probab=72.90 E-value=2.1 Score=50.81 Aligned_cols=30 Identities=27% Similarity=0.520 Sum_probs=27.8
Q ss_pred ccchhhHhcccccccccHHHHHHHHHHHHH
Q psy11265 436 SIPKLKEDGNTLYKAGNIQGALDKYSTALG 465 (945)
Q Consensus 436 ~a~~~Ke~GN~~fK~g~y~~A~~kY~rAl~ 465 (945)
.+..-|++||++|+.|+|..|++.|.+|++
T Consensus 357 ~A~e~r~kGne~Fk~gdy~~Av~~YteAIk 386 (539)
T KOG0548|consen 357 KAEEEREKGNEAFKKGDYPEAVKHYTEAIK 386 (539)
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHHHh
Confidence 378889999999999999999999999877
No 138
>KOG0550|consensus
Probab=72.59 E-value=1.7 Score=50.27 Aligned_cols=50 Identities=26% Similarity=0.222 Sum_probs=38.3
Q ss_pred hhhccchhhHhcccccccccHHHHHHHHHHHHHHHHhhhhcccccccccCCC
Q psy11265 433 KLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLKQTFVNRTVKPP 484 (945)
Q Consensus 433 kl~~a~~~Ke~GN~~fK~g~y~~A~~kY~rAl~~Le~~~~~e~~~~~~l~~~ 484 (945)
..+.++..|++||..||.|+|+.|-.+|..||.+= -..+.+.+.++.|..
T Consensus 245 ~~k~le~~k~~gN~~fk~G~y~~A~E~Yteal~id--P~n~~~naklY~nra 294 (486)
T KOG0550|consen 245 MPKKLEVKKERGNDAFKNGNYRKAYECYTEALNID--PSNKKTNAKLYGNRA 294 (486)
T ss_pred hHHHHHHHHhhhhhHhhccchhHHHHHHHHhhcCC--ccccchhHHHHHHhH
Confidence 35567889999999999999999999999999842 224445555666544
No 139
>PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A ....
Probab=72.38 E-value=2.6 Score=35.70 Aligned_cols=30 Identities=13% Similarity=0.336 Sum_probs=27.3
Q ss_pred cchhhHhcccccccccHHHHHHHHHHHHHH
Q psy11265 437 IPKLKEDGNTLYKAGNIQGALDKYSTALGY 466 (945)
Q Consensus 437 a~~~Ke~GN~~fK~g~y~~A~~kY~rAl~~ 466 (945)
+......|+.+|+.|+|..|+..|++|+.+
T Consensus 3 a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~ 32 (69)
T PF13414_consen 3 AEAWYNLGQIYFQQGDYEEAIEYFEKAIEL 32 (69)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 556788999999999999999999999996
No 140
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=72.21 E-value=2.7 Score=47.01 Aligned_cols=143 Identities=14% Similarity=0.168 Sum_probs=82.9
Q ss_pred CCCcccceeeeeeecCCc--cccHHHHHhhcC----CCccc--------chhccCCccc------------cCCCCCccH
Q psy11265 4 QWPENVGILGIEFYFPSQ--YVDQTELEKHDQ----VSAGK--------YTIGLGQAKM------------GFCSDLEDI 57 (945)
Q Consensus 4 ~~~~~VGI~ai~~y~p~~--yvd~~~L~~~~g----v~~~K--------yt~GLGq~~m------------~~~~~~EDi 57 (945)
.+|..|-+.+-.-|-|+. -|+.+.+.++-. .+..- -.-|||++.- +....+|..
T Consensus 4 ~R~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy~P~~~~~~p~~~s~~~a~~Ea 83 (290)
T PF08392_consen 4 RRPRPVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETYLPPALHEIPPDPSLAAAREEA 83 (290)
T ss_pred CCCCCEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCccccCCcccccCCCcccHHHHHHHH
Confidence 355677777777777753 355555544311 11111 1236666531 111112334
Q ss_pred HHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhh-hhhhhhH
Q psy11265 58 NSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDK-YSTALGY 136 (945)
Q Consensus 58 vsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~-k~acyg~ 136 (945)
-.+.-.|++.||++.+++|++|+-| +|++- ..-.+.-.-+.-+..++...+. +.+.. -.+|-+|
T Consensus 84 e~v~f~av~~LL~ktgv~p~dIdiL-Vvncs------~f~ptPSLsamIvnr~~mr~di--------~~~nLsGMGCsAg 148 (290)
T PF08392_consen 84 EMVIFGAVDDLLAKTGVKPSDIDIL-VVNCS------LFNPTPSLSAMIVNRYGMRSDI--------KSYNLSGMGCSAG 148 (290)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEE-EEECc------CCCcCCcHHHHHHHHhCCCcCe--------eeecccCCcchhh
Confidence 4567789999999999999999988 77665 1222222222222334443333 22221 1269999
Q ss_pred HHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 137 LEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 137 t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
.-+ +..|.++++.+ |+..+|| ++.+
T Consensus 149 lia-i~lA~~lL~~~----p~~~ALVVstE~ 174 (290)
T PF08392_consen 149 LIA-IDLAKDLLQAH----PNSYALVVSTEN 174 (290)
T ss_pred HHH-HHHHHHHHHhC----CCcEEEEEEEee
Confidence 999 88888888743 7899998 6654
No 141
>PRK12404 stage V sporulation protein AD; Provisional
Probab=72.09 E-value=2.9 Score=47.33 Aligned_cols=82 Identities=9% Similarity=0.026 Sum_probs=56.9
Q ss_pred ccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhhhhh
Q psy11265 55 EDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTAL 134 (945)
Q Consensus 55 EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~acy 134 (945)
+..-.|+..|++..|++.++++++|+.+ .+|+-. .. .+--+.....|+. ..+.++.||-
T Consensus 52 kAE~~L~~EA~~~AL~kAGI~~~DID~i-~vGdL~----nQ----~ipssfvar~LGI------------P~~gV~gACS 110 (334)
T PRK12404 52 KAERKLLEEACSRAIEKAKLRKEDIQFF-LAGDLM----NQ----ITPTSFAARTLGI------------PYLGLFGACS 110 (334)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEecC----CC----cCcHHHHHHHhCC------------CccceeecCH
Confidence 3445699999999999999999999888 777761 00 0000111122321 1267889999
Q ss_pred hHHHHHHhhccceEEeecccCCCcceee
Q psy11265 135 GYLEQLMLNSMFSIHINRAAVDTLKTLV 162 (945)
Q Consensus 135 g~t~alL~~a~~~i~v~~~~~~~~~~LV 162 (945)
++..| |..|..+|+ ++ ....+||
T Consensus 111 Tg~eA-L~lAa~~Va--SG--~Ad~VLa 133 (334)
T PRK12404 111 TSMEG-LALAALIVN--SG--GAKYVLT 133 (334)
T ss_pred HHHHH-HHHHHHHHH--cC--CCCEEEE
Confidence 99999 888888886 33 4578888
No 142
>PLN02287 3-ketoacyl-CoA thiolase
Probab=70.12 E-value=4.2 Score=48.46 Aligned_cols=110 Identities=6% Similarity=-0.088 Sum_probs=69.9
Q ss_pred cchhccCCccccC--CC--CCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhccccccc
Q psy11265 38 KYTIGLGQAKMGF--CS--DLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKED 113 (945)
Q Consensus 38 Kyt~GLGq~~m~~--~~--~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~ 113 (945)
=|-+|.|++.++= .. ...+...|+..|++.+|++.++++++|+.+ .+|+-. ..+........-....++..
T Consensus 48 V~IVG~grTpfgk~~~g~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~v-v~G~~~----~~~~~~~~~~r~~a~~~Gl~ 122 (452)
T PLN02287 48 VVIVAAYRTPICKAKRGGFKDTYPDDLLAPVLKAVVEKTGLNPSEVGDI-VVGTVL----APGSQRANECRMAAFYAGFP 122 (452)
T ss_pred EEEEEeecCCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEeec----CcccccchHHHHHHHHCCCC
Confidence 3777888887653 12 468899999999999999999999999998 666541 01111110000011222322
Q ss_pred CccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 114 GNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 114 Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
++. -.+.+..+|-+|..| +..|...|+ ++ ....+|| +.+
T Consensus 123 ~~~--------pa~~V~~~CaSG~~A-i~~Aa~~I~--sG--~~dvvLv~GvE 162 (452)
T PLN02287 123 ETV--------PVRTVNRQCSSGLQA-VADVAAAIK--AG--FYDIGIGAGVE 162 (452)
T ss_pred CCc--------ceEEEeccCchHHHH-HHHHHHHHH--cC--CCCeEEEEeEE
Confidence 212 234666789999999 888888886 43 3466777 544
No 143
>KOG0546|consensus
Probab=66.74 E-value=3.1 Score=47.35 Aligned_cols=46 Identities=35% Similarity=0.460 Sum_probs=39.4
Q ss_pred hhhccC-HHHhhhccchhhHhcccccccccHHHHHHHHHHHHHHHHh
Q psy11265 424 ESWQLT-EAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQ 469 (945)
Q Consensus 424 e~w~ms-~eEkl~~a~~~Ke~GN~~fK~g~y~~A~~kY~rAl~~Le~ 469 (945)
..|.+. ..+.++.++.+|+.||..||.++|..|..+|.+++.+++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~k~~~~~~~kk~~~~~a~~k~~k~~r~~~~ 254 (372)
T KOG0546|consen 208 RSWDDKDFDKALEREEKKKNIGNKEFKKQRYREALAKYRKALRYLSE 254 (372)
T ss_pred ccccccccchhhhhhhhhhccchhhhhhccHhHHHHHHHHHhhhhcc
Confidence 456664 3456788899999999999999999999999999999975
No 144
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=65.29 E-value=9.3 Score=44.58 Aligned_cols=109 Identities=9% Similarity=0.098 Sum_probs=67.0
Q ss_pred chhccCCccccCCC---------CCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhccc
Q psy11265 39 YTIGLGQAKMGFCS---------DLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPK 109 (945)
Q Consensus 39 yt~GLGq~~m~~~~---------~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~ 109 (945)
|-+|.|++.++=-. .......|+..|++++|++.+++|++|+.+ .+++-. .+...|-... -.......
T Consensus 5 ~Ivg~~rTpfgk~~~~~~~~g~~~~~~~~~L~~~a~~~AL~~agl~~~dID~v-i~g~~~-~~~~~~~~~~-~~~~l~a~ 81 (394)
T PRK06445 5 YLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDI-ITGCAL-QVGENWLYGG-RHPIFLAR 81 (394)
T ss_pred EEEecccCCccccCcCCCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCee-EEEeec-CCCcccccHH-HHHHHHcC
Confidence 55677777754210 035689999999999999999999999988 777641 0000010000 00000011
Q ss_pred ccccCccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 110 LKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 110 l~~~Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
+. .+. -++.+..+|-++..+ +..|...|+ ++ .-..+|| +.+
T Consensus 82 ~~--~~~--------p~~~V~~~CaSg~~a-i~~A~~~I~--sG--~~d~vLv~G~e 123 (394)
T PRK06445 82 LP--YNI--------PAMAVDRQCASSLTT-VSIGAMEIA--TG--MADIVIAGGVE 123 (394)
T ss_pred CC--CCC--------cchhhhhhhHHHHHH-HHHHHHHHH--cC--CCCEEEEeeec
Confidence 11 111 346788899999999 888888886 33 3467777 544
No 145
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=64.57 E-value=7 Score=45.86 Aligned_cols=109 Identities=10% Similarity=-0.014 Sum_probs=68.8
Q ss_pred chhccCCccccCCC----CCccHHHHHHHHHHHHHHhc-cCCHHhhcccccccCCcccccccccccchhhhhhccccccc
Q psy11265 39 YTIGLGQAKMGFCS----DLEDINSICLTVVSNLMKRY-ELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKED 113 (945)
Q Consensus 39 yt~GLGq~~m~~~~----~~EDivsla~~a~~~Ll~~~-~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~ 113 (945)
|-+|.|++..+--. ..-+...|++.|++++|++. +++|++|+.+ .+++-. ...+++...- ......++..
T Consensus 5 ~IvG~~~Tpfg~~~~g~~~~~~~~eL~~~A~~~AL~da~gl~~~dID~v-v~g~~~---~~~~~g~~~~-~~~a~~lGl~ 79 (406)
T PRK07851 5 VIVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDL-MLGCGL---PGGEQGFNMA-RVVAVLLGYD 79 (406)
T ss_pred EEEecCCCCcccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEE-EEEccc---ccccccCCHH-HHHHHHcCCC
Confidence 55688888765422 24678999999999999996 9999999998 666321 1112211110 1111223332
Q ss_pred CccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 114 GNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 114 Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
+ . -.+.+..+|-+|..+ +..|...|+ ++ -...+|| +.+.
T Consensus 80 ~-~--------p~~~v~~~caSG~~a-v~~Aa~~I~--sG--~~d~vLv~G~e~ 119 (406)
T PRK07851 80 F-L--------PGTTVNRYCSSSLQT-TRMAFHAIK--AG--EGDVFISAGVET 119 (406)
T ss_pred C-C--------CeeeeeccchhHHHH-HHHHHHHHH--CC--CCCEEEEeeEEe
Confidence 1 1 123555689999999 899999997 43 3356777 6453
No 146
>PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A ....
Probab=64.28 E-value=2.6 Score=35.71 Aligned_cols=40 Identities=23% Similarity=0.257 Sum_probs=25.6
Q ss_pred hHhhhcccccceehhhhhccccc-chhHHHHhhhhhhccCC
Q psy11265 896 WKKLNDLKIPILLNYSQCKLDQK-DYYSVIEHTTTVLTYDP 935 (945)
Q Consensus 896 w~~l~~~~~pl~lny~qc~l~~~-~yy~v~~h~~~~l~~~~ 935 (945)
+++++.-...++.|.+.|+..+| +|=+++++...+|+.+|
T Consensus 29 ai~~~p~~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 29 AIELDPNNAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp HHHHSTTHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHcCCCCHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 44555555556666677777666 56666777666666665
No 147
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=64.17 E-value=4.9 Score=45.06 Aligned_cols=133 Identities=9% Similarity=0.005 Sum_probs=81.2
Q ss_pred eeeeeeecCCccccHHHHHhhc-CC--------Ccccchh-ccCCccccCCCC----------------CccHHHHHHHH
Q psy11265 11 ILGIEFYFPSQYVDQTELEKHD-QV--------SAGKYTI-GLGQAKMGFCSD----------------LEDINSICLTV 64 (945)
Q Consensus 11 I~ai~~y~p~~yvd~~~L~~~~-gv--------~~~Kyt~-GLGq~~m~~~~~----------------~EDivsla~~a 64 (945)
|..+.-++|++-+.|+|....- .. =+.-|+. +.=-.+|.|-|. .|-.+-++..|
T Consensus 4 i~sv~t~~Ppy~~~Qse~~d~f~~~~~~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~~l~v~a 83 (356)
T COG3424 4 IASVATALPPYRYNQSEITDSFAELPFQEGREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAVPLGVDA 83 (356)
T ss_pred eeecccCCCccccchHHHHHHHHHhccccchHHHHHHHhhccccccceecccHhhccCCCChhhhhhhHHHHHHHHHHHH
Confidence 5667788999999997654330 00 0222331 111123333332 25678899999
Q ss_pred HHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhhhhhhHHHHHHhhc
Q psy11265 65 VSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLNS 144 (945)
Q Consensus 65 ~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a 144 (945)
+++-|+..++-|++|+.+ .+.|- +..---++|. .-+..|+.+... .|..=.-=.|++|.++ |..|
T Consensus 84 ~r~aL~~~~l~pedId~v-v~vts-----TG~~~Ps~da-ri~~~Lgl~p~~-------~Rvpv~glGCaaga~g-lara 148 (356)
T COG3424 84 LRRALDGSPLRPEDIDAV-VTVTS-----TGLATPSLDA-RIVGELGLSPDT-------RRVPVWGLGCAAGAAG-LARA 148 (356)
T ss_pred HHHHhccCCCCHHHCcEE-EEEee-----ccccCCChhH-HHHhhcCCCCcc-------ceeeeecchhhhhhhH-HHHH
Confidence 999999999999999999 55554 1111112221 112344443222 3443344479999999 9999
Q ss_pred cceEEeecccCCCcceee
Q psy11265 145 MFSIHINRAAVDTLKTLV 162 (945)
Q Consensus 145 ~~~i~v~~~~~~~~~~LV 162 (945)
.+|++ ..|..++||
T Consensus 149 ~~y~r----a~P~~~vlv 162 (356)
T COG3424 149 RDYCR----AAPDANVLV 162 (356)
T ss_pred HHHHh----hCccceEEE
Confidence 99997 347788887
No 148
>PF14559 TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN_B 3QOU_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 3FP3_A 3LCA_A ....
Probab=63.50 E-value=3 Score=35.14 Aligned_cols=42 Identities=26% Similarity=0.247 Sum_probs=35.5
Q ss_pred hHhhhcccccceehhhhhcccccchhHHHHhhhhhhccCCCC
Q psy11265 896 WKKLNDLKIPILLNYSQCKLDQKDYYSVIEHTTTVLTYDPEG 937 (945)
Q Consensus 896 w~~l~~~~~pl~lny~qc~l~~~~yy~v~~h~~~~l~~~~~~ 937 (945)
+++.+.-...+.+++++|++..|+|=++.+.+..++..+|+|
T Consensus 17 ~l~~~p~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~ 58 (68)
T PF14559_consen 17 ALQRNPDNPEARLLLAQCYLKQGQYDEAEELLERLLKQDPDN 58 (68)
T ss_dssp HHHHTTTSHHHHHHHHHHHHHTT-HHHHHHHHHCCHGGGTTH
T ss_pred HHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCH
Confidence 345555567788999999999999999999999999999996
No 149
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=59.74 E-value=12 Score=43.34 Aligned_cols=109 Identities=7% Similarity=-0.044 Sum_probs=65.6
Q ss_pred chhccCCccccCCCC---CccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCc
Q psy11265 39 YTIGLGQAKMGFCSD---LEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGN 115 (945)
Q Consensus 39 yt~GLGq~~m~~~~~---~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn 115 (945)
|-+|.|++.++=-.. ..++..|++.|++.+|++.++++++|+.+ .++.-... ..+.+........ ..+....
T Consensus 5 ~Ivg~~~Tpf~~~~~~~~~~~~~~L~~~a~~~al~dagl~~~~ID~v-v~g~~~~~--~~~~~~~~~~~~l--~~gl~~~ 79 (382)
T PRK07801 5 YIVDAVRTPVGKRKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDV-IFGCVDTI--GPQAGNIARTSWL--AAGLPEE 79 (382)
T ss_pred EEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEE-EEEeeccC--CcccccHHHHHHH--HcCCCCC
Confidence 556888887653222 25789999999999999999999999988 56632000 1110111111000 1111100
Q ss_pred cccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 116 TLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 116 ~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
. -.+.+-++|-++..+ +..|...|+ ++ -...+|| +.+
T Consensus 80 ~--------p~~~v~~acaSg~~A-v~~Aa~~I~--sG--~~d~vLv~G~e 117 (382)
T PRK07801 80 V--------PGVTVDRQCGSSQQA-IHFAAQAVM--SG--TQDLVVAGGVQ 117 (382)
T ss_pred C--------ceeeecchhhhHHHH-HHHHHHHHH--CC--CCCEEEEcchh
Confidence 1 223455689999999 888888886 43 2356777 544
No 150
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=57.81 E-value=15 Score=43.55 Aligned_cols=108 Identities=13% Similarity=-0.015 Sum_probs=67.1
Q ss_pred chhccCCccccCCC---CCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCc
Q psy11265 39 YTIGLGQAKMGFCS---DLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGN 115 (945)
Q Consensus 39 yt~GLGq~~m~~~~---~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn 115 (945)
|-+|-+++.++-.. ....+..|++.|++.+|++.+++|++|+.+ .+|+... .+++..+-. .....++....
T Consensus 8 ~Ivg~~rTpfgk~~g~l~~~~~~eL~~~a~~~al~~agl~~~~ID~v-i~G~~~~----~~~~~~~ar-~~a~~aGl~~~ 81 (428)
T PRK08963 8 AIVSGLRTPFAKQATAFHGIPAVDLGKMVVGELLARSEIDPELIEQL-VFGQVVQ----MPEAPNIAR-EIVLGTGMNVH 81 (428)
T ss_pred EEEecccCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEeccCC----CCCccHHHH-HHHHHCCCCCC
Confidence 56677777765321 355688999999999999999999999999 8776521 112111100 11111222100
Q ss_pred cccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 116 TLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 116 ~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
. -.+.+-++|-+|..| +..|...|+ ++ -..-+|| ..+
T Consensus 82 ~--------P~~tV~~aCaSG~~A-i~~Aa~~I~--sG--~~dvvLvgG~E 119 (428)
T PRK08963 82 T--------DAYSVSRACATSFQA-VANVAESIM--AG--TIDIGIAGGAD 119 (428)
T ss_pred C--------cceeehhhhHHHHHH-HHHHHHHHH--CC--CCCEEEEeccc
Confidence 1 124566799999999 888888886 43 2345666 443
No 151
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=57.27 E-value=13 Score=43.70 Aligned_cols=109 Identities=10% Similarity=0.036 Sum_probs=68.2
Q ss_pred chhccCCccccCCC---CCccHHHHHHHHHHHHHHhc-cCCHHhhcccccccCCcccccccccccchhhhhhcccccccC
Q psy11265 39 YTIGLGQAKMGFCS---DLEDINSICLTVVSNLMKRY-ELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDG 114 (945)
Q Consensus 39 yt~GLGq~~m~~~~---~~EDivsla~~a~~~Ll~~~-~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~G 114 (945)
|-+|-|++.++--. ...++..|+..|++.+|+|. +++|++|+.+ .+|.-. ...|++..+-. .....++.+.
T Consensus 4 ~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~~a~i~~~~Id~v-~~G~~~---~~~~~~~~~ar-~~~~~~Gl~~ 78 (400)
T TIGR02430 4 YICDAIRTPIGRYGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDV-IYGCAN---QAGEDNRNVAR-MAALLAGLPV 78 (400)
T ss_pred EEEecccCCcccCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEE-EEEecc---ccccccccHHH-HHHHHcCCCC
Confidence 55677777665321 25667899999999999974 8999999999 777431 12332211111 1122333332
Q ss_pred ccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 115 NTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 115 n~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
+. -.+.+-++|-+|..| +..|...|+ ++ ...-+|| ..+
T Consensus 79 ~~--------p~~~V~~~CaSG~~A-i~~a~~~I~--sG--~~d~~la~G~E 117 (400)
T TIGR02430 79 SV--------PGTTVNRLCGSGLDA-IGMAARAIK--AG--EADLLIAGGVE 117 (400)
T ss_pred CC--------ceEEeechhhhHHHH-HHHHHHHHH--CC--CCCEEEEeccc
Confidence 23 345677899999999 888888886 43 2345666 544
No 152
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=56.40 E-value=11 Score=43.99 Aligned_cols=107 Identities=7% Similarity=-0.019 Sum_probs=66.9
Q ss_pred chhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCcccc
Q psy11265 39 YTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLY 118 (945)
Q Consensus 39 yt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~ly 118 (945)
+-+|.|++..+-- .......|++.|++.+|++.++++++|+-+ .+++-. +.| +++.........++..+ .
T Consensus 10 ~IvG~g~tp~~~~-~~~~~~~L~~ea~~~AL~dagl~~~dID~v-~vg~~~----~~~-~~~~~~~~~a~~lGl~~-~-- 79 (398)
T PRK06157 10 AILGMGCTKFGER-WDAGAEDLMVEAFLEALADAGIEPKDIDAA-WFGTHY----DEI-GSGKSGTPLSRALRLPN-I-- 79 (398)
T ss_pred EEEEecccccccc-CCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEecc----ccc-cccchhHHHHHHcCCCC-C--
Confidence 5667887775422 235679999999999999999999999988 666531 000 01111011222344322 2
Q ss_pred ccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 119 KAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 119 k~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
....+-.+|-++..+ +..|...|+ ++ -...+|| ..+.
T Consensus 80 ------~~~~v~~~c~sg~~a-i~~A~~~I~--sG--~~d~vlv~G~e~ 117 (398)
T PRK06157 80 ------PVTRVENFCATGSEA-FRGAVYAVA--SG--AYDIALALGVEK 117 (398)
T ss_pred ------CEEEEecccHHHHHH-HHHHHHHHH--CC--CCCEEEEEEEee
Confidence 223456689999999 888888886 43 2356666 5443
No 153
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=55.96 E-value=15 Score=42.86 Aligned_cols=108 Identities=6% Similarity=-0.066 Sum_probs=65.4
Q ss_pred chhccCCccccCCCC---CccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCc
Q psy11265 39 YTIGLGQAKMGFCSD---LEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGN 115 (945)
Q Consensus 39 yt~GLGq~~m~~~~~---~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn 115 (945)
|-+|.|++.++--.. .-+...|++.|++.+|++.+|+|++|+.+ .++.. . .. +.+..+ .......++...+
T Consensus 5 ~Ivg~~rTp~gr~~g~~~~~~~~~L~~~a~~~al~dagi~~~dID~v-i~g~~--~-~~-~~~~~~-a~~~~~~~Gl~~~ 78 (388)
T PRK06366 5 YIVSAKRTAIGKFGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEV-IMGNV--I-QA-GVGQNP-AGQAAYHAGLPFG 78 (388)
T ss_pred EEEEcccCCcccCCCcccCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEec--C-CC-CccCcH-HHHHHHHCCCCCC
Confidence 556888887654322 25789999999999999999999999999 66643 0 00 111111 0111122332211
Q ss_pred cccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 116 TLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 116 ~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
. -.+-+-++|-+|..+ +..|...|+ ++. ..-+|| +.+
T Consensus 79 ~--------p~~~v~~~caSg~~a-v~~Aa~~I~--sG~--~d~vla~G~e 116 (388)
T PRK06366 79 V--------TKYTVNVVCASGMLA-VESAAREIM--LGE--RDLVIAGGME 116 (388)
T ss_pred C--------cceeeechhhHHHHH-HHHHHHHHh--cCC--CCEEEEEeeE
Confidence 1 112233689999999 888898886 432 345666 434
No 154
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=55.73 E-value=19 Score=42.72 Aligned_cols=108 Identities=16% Similarity=-0.011 Sum_probs=67.6
Q ss_pred cchhccCCccccCCC---CCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhc-cccccc
Q psy11265 38 KYTIGLGQAKMGFCS---DLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASI-PKLKED 113 (945)
Q Consensus 38 Kyt~GLGq~~m~~~~---~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~-~~l~~~ 113 (945)
-|-+|.+++.++--. ..-+...|+..|++.+|++.+++|++|+.+ .+|.-. .. +......... -..++.
T Consensus 9 V~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~agl~~~~Id~v-i~G~~~-----~~-~~~~~~ar~~~l~aGl~ 81 (430)
T TIGR02446 9 IAIVAGLRTPFARQATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQL-VFGQVV-----QM-PEAPNIAREIVLGTGMN 81 (430)
T ss_pred EEEEecccCccccCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEecc-----Cc-CccchHHHHHHHhCCCC
Confidence 366778888765421 345789999999999999999999999999 776431 00 0100000000 001222
Q ss_pred CccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 114 GNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 114 Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
... -.+.+-++|-+|..| +..|...|+ ++. ..-+|| ..+
T Consensus 82 ~~~--------p~~~V~~~CaSG~~A-~~~a~~~I~--sG~--~dvvla~G~E 121 (430)
T TIGR02446 82 VHT--------DAYSVTRACATSFQS-AVNVAESIM--AGA--IDIGIAGGAD 121 (430)
T ss_pred CCC--------chhhhhhhhhHHHHH-HHHHHHHHH--CCC--CCEEEEeeeE
Confidence 111 245677899999999 888888886 432 345666 544
No 155
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=54.10 E-value=13 Score=43.53 Aligned_cols=108 Identities=6% Similarity=0.005 Sum_probs=66.9
Q ss_pred chhccCCccccCCC---CCccHHHHHHHHHHHHHHhc-cCCHHhhcccccccCCcccccccccc-cchhhhhhccccccc
Q psy11265 39 YTIGLGQAKMGFCS---DLEDINSICLTVVSNLMKRY-ELDYAQIGQLLQVESPEEYEQESWQL-TEAEKLASIPKLKED 113 (945)
Q Consensus 39 yt~GLGq~~m~~~~---~~EDivsla~~a~~~Ll~~~-~~~~~~Ig~l~~v~Te~~~~~s~wd~-s~~d~sk~~~~l~~~ 113 (945)
|-+|-+++.++=-. .......|+..|++.+|+|. +++|++|+.+ .+|.-. +.++. ..+-. .....++.+
T Consensus 5 ~Ivg~~rTpfgk~~g~l~~~~~~~L~~~a~~~al~~~agi~~~~Id~v-~~G~~~----~~~~~~~~~ar-~~~~~~Gl~ 78 (401)
T PRK09050 5 FICDAIRTPIGRYGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDV-IYGCAN----QAGEDNRNVAR-MSALLAGLP 78 (401)
T ss_pred EEEecccCCcccCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEE-EEEecc----ccccccchHHH-HHHHHcCCC
Confidence 44566666654311 25677899999999999974 8999999999 777431 12221 11111 112223332
Q ss_pred CccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 114 GNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 114 Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
.+. -.+.+-++|-+|..| +..|...|+ ++ ....+|| +.+
T Consensus 79 ~~v--------P~~tV~~aCaSG~~A-i~~A~~~I~--sG--~~dvvlagGvE 118 (401)
T PRK09050 79 VSV--------PGTTINRLCGSGMDA-VGTAARAIK--AG--EAELMIAGGVE 118 (401)
T ss_pred CCC--------ceEEEecccccHHHH-HHHHHHHHH--CC--CCCEEEEeccc
Confidence 222 334566789999999 888999996 43 2356666 544
No 156
>PF13174 TPR_6: Tetratricopeptide repeat; PDB: 3QKY_A 2XEV_A 3URZ_B 2Q7F_A.
Probab=53.38 E-value=5.1 Score=28.62 Aligned_cols=31 Identities=23% Similarity=0.409 Sum_probs=28.6
Q ss_pred eehhhhhcccccchhHHHHhhhhhhccCCCC
Q psy11265 907 LLNYSQCKLDQKDYYSVIEHTTTVLTYDPEG 937 (945)
Q Consensus 907 ~lny~qc~l~~~~yy~v~~h~~~~l~~~~~~ 937 (945)
+++.+.|+..+|++=+.++.-.++++.+|+.
T Consensus 3 ~~~~a~~~~~~g~~~~A~~~~~~~~~~~P~s 33 (33)
T PF13174_consen 3 LYRLARCYYKLGDYDEAIEYFQRLIKRYPDS 33 (33)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHCcCC
Confidence 5688999999999999999999999999974
No 157
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=52.96 E-value=12 Score=43.87 Aligned_cols=93 Identities=9% Similarity=0.027 Sum_probs=59.5
Q ss_pred ccHHHHHHHHHHHHHHhc-cCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhhhh
Q psy11265 55 EDINSICLTVVSNLMKRY-ELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTA 133 (945)
Q Consensus 55 EDivsla~~a~~~Ll~~~-~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~ac 133 (945)
-++..|+..|++.+|+|. +|+|++|+.+ .+|.- ....+++..+-. ...-..+++.+. ..+.+-++|
T Consensus 24 ~~~~~L~~~a~~~al~r~a~i~~~~Id~v-i~G~~---~~~~~~g~~~ar-~~~l~~Gl~~~v--------p~~tV~~~C 90 (400)
T PRK13359 24 VRADDLGAVPLKALVERNPDVDWAAIDDV-IYGCA---NQAGEDNRNVAR-MSLLLAGLPHGV--------PGSTINRLC 90 (400)
T ss_pred CCHHHHHHHHHHHHHHhccCCCHHHCCEE-EEEec---cccccccccHHH-HHHHHcCCCCCC--------ceEEEeccc
Confidence 367889999999999986 8999999999 77643 011222211111 111233334333 455677899
Q ss_pred hhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 134 LGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 134 yg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
-+|..| +..|...|+ ++ ...-+|| +.+
T Consensus 91 aSG~~A-v~~A~~~I~--sG--~~divlagGvE 118 (400)
T PRK13359 91 GSGMDA-VGVAARAIK--SG--EAALMIAGGVE 118 (400)
T ss_pred hhHHHH-HHHHHHHHH--cC--CCCEEEEeeee
Confidence 999999 888888886 33 2345566 443
No 158
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=52.16 E-value=15 Score=37.23 Aligned_cols=59 Identities=10% Similarity=0.015 Sum_probs=41.0
Q ss_pred hhhchhhhhccccCcccchhHHHHHHHHhccC--Ccccc--CCCcEEEEEecCCCcccccccc
Q psy11265 733 RLTKPGLYLANLIGNMYTPSLYGCLVSLLIQT--PWERL--QGMSRIGLFSYGSDNIKALFRR 791 (945)
Q Consensus 733 ~kv~psl~~~~~vGN~YTaSlyl~L~SlL~~~--~~~~L--~G~~rI~l~s~GsG~~~~~~~~ 791 (945)
.++++|-..=++-|||=+++++.-|--++... +...- +|.+++.+++||-|...+..-.
T Consensus 85 ~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~lL 147 (151)
T PF02797_consen 85 EQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGMLL 147 (151)
T ss_dssp GGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEEE
Confidence 45677777779999999999999999988721 11101 1227899999999988776543
No 159
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=51.95 E-value=12 Score=43.00 Aligned_cols=98 Identities=14% Similarity=0.057 Sum_probs=59.7
Q ss_pred CCccHHHHHHHHHHHHHHhcc-CCHHhhcccccccCCcccccccccccchhhh--hhcccccccCccccccCcchhhhhh
Q psy11265 53 DLEDINSICLTVVSNLMKRYE-LDYAQIGQLLQVESPEEYEQESWQLTEAEKL--ASIPKLKEDGNTLYKAGNIQGALDK 129 (945)
Q Consensus 53 ~~EDivsla~~a~~~Ll~~~~-~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~s--k~~~~l~~~Gn~lyk~~~~~~~~e~ 129 (945)
..|-...|+..|++++|++.+ +++++|+.+ .+.++. +...+........ .....++..... ..+.+
T Consensus 61 ~~~r~~~La~~Al~~aL~~a~~~~~~~i~li-l~~~~~--~~~~~~~~~~~~~~~~~~~~lG~~~~~--------~~~~i 129 (348)
T PRK06147 61 GPERLAEMAAPAIAEALEGLPALDASEAPLL-LCVAEE--ERPGRPPDLEERLLRELEARLGLRLEP--------GSAVI 129 (348)
T ss_pred chHHHHHHHHHHHHHHHHhcccccccCCcEE-EEeCch--hcCCCCcchHHHHHHHHHHHhCCCCCC--------Ccccc
Confidence 456788899999999999988 788899776 443331 0001111111111 111223321111 23567
Q ss_pred hhhhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 130 YSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 130 k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
-.+|-+++.| |..|..+|+ + +.-..+|| +.|.
T Consensus 130 ~~~casg~~A-l~~A~~~i~--~--G~~~~~lvgg~d~ 162 (348)
T PRK06147 130 ARGRVSGAVA-LAQARRLIA--A--GGCPRVLVAGVDS 162 (348)
T ss_pred cccchHHHHH-HHHHHHHHH--c--CCCCEEEEEeecc
Confidence 7789999999 999999996 3 23467888 7775
No 160
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=51.58 E-value=18 Score=42.37 Aligned_cols=109 Identities=9% Similarity=0.013 Sum_probs=64.8
Q ss_pred chhccCCccccCCC---CCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCc
Q psy11265 39 YTIGLGQAKMGFCS---DLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGN 115 (945)
Q Consensus 39 yt~GLGq~~m~~~~---~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn 115 (945)
|-+|-+++..+=-. -..+...|+..|++.+|++.+++|++|+.+ .+|+. -...+++..+-. ......+.+..
T Consensus 5 ~Iv~~~rTpfgk~~g~l~~~~~~eL~~~a~~~al~~agi~~~~Id~v-~~G~~---~~~~~~~~~~ar-~~~~~~Glp~~ 79 (401)
T PRK08131 5 YIYDGLRSPFGRHAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDV-ILGCT---NQAGEDSRNVAR-NALLLAGLPVT 79 (401)
T ss_pred EEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEec---cccccccccHHH-HHHHhcCCCCC
Confidence 34455555543111 146789999999999999999999999999 77754 111222222111 11111222111
Q ss_pred cccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 116 TLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 116 ~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
. -.+-+-.+|-+|..| +..|...|+ ++. ..-+|| ..+
T Consensus 80 ~--------p~~tV~~~CaSG~~A-i~~A~~~I~--sG~--~dvvlagG~E 117 (401)
T PRK08131 80 V--------PGQTVNRLCASGLAA-VIDAARAIT--CGE--GDLYLAGGVE 117 (401)
T ss_pred C--------ceeeeechhhhHHHH-HHHHHHHHH--CCC--CCEEEEEEec
Confidence 1 234556689999999 888888886 432 345565 444
No 161
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=50.33 E-value=17 Score=42.34 Aligned_cols=108 Identities=8% Similarity=-0.098 Sum_probs=65.3
Q ss_pred chhccCCccccCCC---CCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhc-ccccccC
Q psy11265 39 YTIGLGQAKMGFCS---DLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASI-PKLKEDG 114 (945)
Q Consensus 39 yt~GLGq~~m~~~~---~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~-~~l~~~G 114 (945)
|-+|-+++.++=-. -.-++..|++.|++.+|++.+++|++|+.+ .+|.- . ..+..... -.... ..++...
T Consensus 5 ~Ivg~~rTpfgk~~g~~~~~~~~eL~~~a~~~aL~~agi~~~~Id~v-~~G~~--~--~~~~q~~~-~ar~~~l~~Gl~~ 78 (387)
T PRK07850 5 VIVEAVRTPIGKRNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQV-IGGCV--T--QAGEQSNN-ITRTAWLHAGLPY 78 (387)
T ss_pred EEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEec--c--ccccccch-HHHHHHHhCCCCC
Confidence 45566666644211 133679999999999999999999999988 76643 1 11110000 00111 1123221
Q ss_pred ccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 115 NTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 115 n~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
+. -.+.+-++|-+|..| +..|...|+ ++. ..-+|| ..+
T Consensus 79 ~~--------p~~tV~~~CaSG~~A-~~~A~~~I~--sG~--~dvvla~G~E 117 (387)
T PRK07850 79 HV--------GATTIDCQCGSAQQA-NHLVAGLIA--AGA--IDVGIACGVE 117 (387)
T ss_pred CC--------ceEEEecccccHHHH-HHHHHHHHH--CCC--CCEEEEEeEe
Confidence 22 235667789999999 888998896 432 345666 544
No 162
>KOG0624|consensus
Probab=50.25 E-value=8.4 Score=43.92 Aligned_cols=29 Identities=21% Similarity=0.491 Sum_probs=27.3
Q ss_pred hhhhcccccchhHHHHhhhhhhccCCCCc
Q psy11265 910 YSQCKLDQKDYYSVIEHTTTVLTYDPEGT 938 (945)
Q Consensus 910 y~qc~l~~~~yy~v~~h~~~~l~~~~~~~ 938 (945)
.|+|+-.-|.+=|+|..|++||+.+|+|.
T Consensus 313 ~c~C~~~d~~~~eAiqqC~evL~~d~~dv 341 (504)
T KOG0624|consen 313 LCTCYREDEQFGEAIQQCKEVLDIDPDDV 341 (504)
T ss_pred eeecccccCCHHHHHHHHHHHHhcCchHH
Confidence 59999999999999999999999999874
No 163
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=48.72 E-value=23 Score=41.38 Aligned_cols=108 Identities=11% Similarity=0.043 Sum_probs=65.6
Q ss_pred chhccCCccccCC----CCCccHHHHHHHHHHHHHHhc-cCCHHhhcccccccCCccccccccc-ccchhhhhhcccccc
Q psy11265 39 YTIGLGQAKMGFC----SDLEDINSICLTVVSNLMKRY-ELDYAQIGQLLQVESPEEYEQESWQ-LTEAEKLASIPKLKE 112 (945)
Q Consensus 39 yt~GLGq~~m~~~----~~~EDivsla~~a~~~Ll~~~-~~~~~~Ig~l~~v~Te~~~~~s~wd-~s~~d~sk~~~~l~~ 112 (945)
|-+|-|++.++=. ...-+...|+..|++.+|+|. +++|++|+.+ .+|+.. ..|+ +..+-. .+....+.
T Consensus 5 ~Ivg~~rTpfg~~~~g~~~~~~~~~L~~~~~~~al~~~agl~~~~Id~v-i~g~~~----~~~~~g~~~ar-~~~~~~Gl 78 (387)
T PRK08947 5 VIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDI-IWGCVQ----QTLEQGFNIAR-NAALLAGI 78 (387)
T ss_pred EEEEccCCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCcChHHhCeE-EEEecc----ccccccccHHH-HHHHHcCC
Confidence 4456666664421 125566899999999999984 8999999998 777541 1222 111111 11112222
Q ss_pred cCccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 113 DGNTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 113 ~Gn~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
..+. -.+.+-++|-+|..| +..|...|+ ++ -..-+|| ..+
T Consensus 79 ~~~~--------p~~~V~~~caSG~~A-i~~A~~~I~--sG--~~d~vlv~G~E 119 (387)
T PRK08947 79 PHSV--------PAVTVNRLCGSSMQA-LHDAARAIM--TG--DGDVFLIGGVE 119 (387)
T ss_pred CCCC--------cceeeechhHHHHHH-HHHHHHHHH--CC--CCCEEEEcccc
Confidence 2112 234566789999999 888899896 43 2355666 443
No 164
>KOG0550|consensus
Probab=47.68 E-value=11 Score=43.95 Aligned_cols=38 Identities=29% Similarity=0.444 Sum_probs=33.7
Q ss_pred HHHhhhccchhhHhcccccccccHHHHHHHHHHHHHHH
Q psy11265 430 EAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYL 467 (945)
Q Consensus 430 ~eEkl~~a~~~Ke~GN~~fK~g~y~~A~~kY~rAl~~L 467 (945)
..|--..++..|++||.++|+++|..|++-|..|++..
T Consensus 42 ~~~~~~~Ae~~k~~gn~~yk~k~Y~nal~~yt~Ai~~~ 79 (486)
T KOG0550|consen 42 SQEAAQQAEEAKEEGNAFYKQKTYGNALKNYTFAIDMC 79 (486)
T ss_pred cchHHHHHHHHHhhcchHHHHhhHHHHHHHHHHHHHhC
Confidence 45566778999999999999999999999999999864
No 165
>PF13181 TPR_8: Tetratricopeptide repeat; PDB: 3GW4_B 3MA5_C 2KCV_A 2KCL_A 3FP3_A 3LCA_A 3FP4_A 3FP2_A 1W3B_B 1ELW_A ....
Probab=47.14 E-value=18 Score=26.13 Aligned_cols=29 Identities=21% Similarity=0.292 Sum_probs=24.5
Q ss_pred chhhHhcccccccccHHHHHHHHHHHHHH
Q psy11265 438 PKLKEDGNTLYKAGNIQGALDKYSTALGY 466 (945)
Q Consensus 438 ~~~Ke~GN~~fK~g~y~~A~~kY~rAl~~ 466 (945)
+.+-..|..+.+.|++..|...|++|+++
T Consensus 2 ~~~~~lg~~y~~~~~~~~A~~~~~~a~~~ 30 (34)
T PF13181_consen 2 EAYYNLGKIYEQLGDYEEALEYFEKALEL 30 (34)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 34556788899999999999999999985
No 166
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=46.76 E-value=27 Score=41.37 Aligned_cols=107 Identities=10% Similarity=0.062 Sum_probs=64.3
Q ss_pred chhccCCccccCCC---CCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhc-ccccccC
Q psy11265 39 YTIGLGQAKMGFCS---DLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASI-PKLKEDG 114 (945)
Q Consensus 39 yt~GLGq~~m~~~~---~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~-~~l~~~G 114 (945)
|-+|-+++.++-.. ...+...|+..|++.+|++.++++++|+.+ .+|+-.. .+. +...... .+. .-+....
T Consensus 10 ~Ivg~~rTpfg~~~g~l~~~~~~eL~~~a~~~al~~agl~~~~Id~v-v~G~~~~--~~~-~~~~~r~-~~l~~gl~~~~ 84 (427)
T PRK09268 10 AILGGNRIPFARSNGAYADASNQDMLTAALDGLVDRFGLQGERLGEV-VAGAVLK--HSR-DFNLTRE-CVLGSALSPYT 84 (427)
T ss_pred EEEecCcCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEeccc--CCc-cccHHHH-HHHHcCCCCCC
Confidence 55677777644211 245789999999999999999999999999 7775311 000 0000111 001 0111111
Q ss_pred ccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 115 NTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 115 n~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
-.+-+..+|-+|..+ +..|...|+ ++. ..-+|| ..+
T Consensus 85 ----------p~~~V~~~CaSG~~a-i~~A~~~I~--sG~--~d~vlvgG~E 121 (427)
T PRK09268 85 ----------PAYDLQQACGTGLEA-AILVANKIA--LGQ--IDSGIAGGVD 121 (427)
T ss_pred ----------ceeeeechhhHHHHH-HHHHHHHHH--CCC--CCEEEEeeEE
Confidence 124566789999999 888888886 432 345666 443
No 167
>cd02682 MIT_AAA_Arch MIT: domain contained within Microtubule Interacting and Trafficking molecules. This sub-family of MIT domains is found in mostly archaebacterial AAA-ATPases. The molecular function of the MIT domain is unclear.
Probab=46.45 E-value=23 Score=31.97 Aligned_cols=39 Identities=21% Similarity=0.237 Sum_probs=30.5
Q ss_pred hhHhcccccccccHHHHHHHHHHHHHHHHhhhhcccccc
Q psy11265 440 LKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLKQTFVN 478 (945)
Q Consensus 440 ~Ke~GN~~fK~g~y~~A~~kY~rAl~~Le~~~~~e~~~~ 478 (945)
+-.+.-++=+.|+|.+|+..|++|++.|-.+....|+.+
T Consensus 9 ~a~~AVe~D~~gr~~eAi~~Y~~aIe~L~q~~~~~pD~~ 47 (75)
T cd02682 9 YAINAVKAEKEGNAEDAITNYKKAIEVLSQIVKNYPDSP 47 (75)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhCCChH
Confidence 334445666889999999999999999988877666633
No 168
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=46.01 E-value=5.8 Score=35.45 Aligned_cols=36 Identities=17% Similarity=0.084 Sum_probs=28.2
Q ss_pred hhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecccc
Q psy11265 127 LDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLSD 167 (945)
Q Consensus 127 ~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdia 167 (945)
||+.++|-|.+.| |+.|..+|+ ++ ..+++|| ++|..
T Consensus 1 fDi~~~C~g~~~a-l~~A~~~i~--~g--~~~~~Lvv~~d~~ 37 (80)
T PF08545_consen 1 FDINQACAGFLYA-LDVAAALIA--SG--RAKNALVVGGDRL 37 (80)
T ss_dssp EEEE-GGGHHHHH-HHHHHHHHH--TT--S-SEEEEEEEEEG
T ss_pred CcccccchHHHHH-HHHHHHHHh--hc--cCCEEEEEeeccc
Confidence 4778999999999 999999996 33 5688998 88875
No 169
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=44.97 E-value=30 Score=40.44 Aligned_cols=109 Identities=11% Similarity=-0.031 Sum_probs=66.8
Q ss_pred chhccCCccccCCC----CCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccC
Q psy11265 39 YTIGLGQAKMGFCS----DLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDG 114 (945)
Q Consensus 39 yt~GLGq~~m~~~~----~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~G 114 (945)
|-+|-+++.++=-. -.-+...|+..|++.+|++.++.+++|+.+ .+|+- ....+++..+-. .....++..+
T Consensus 5 ~Ivg~~rTpfg~~~~g~l~~~~~~eLa~~A~~~AL~~ag~~~~dID~v-i~g~~---~~~~~~g~~~a~-~~~~~lGl~~ 79 (391)
T PRK07661 5 VIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDL-IIGCA---MPEAEQGLNMAR-NIGALAGLPY 79 (391)
T ss_pred EEEEccCCCcccCCCCccCCCCHHHHHHHHHHHHHHhcCCChhHCCEE-EEEec---cccccccchHHH-HHHHHcCCCC
Confidence 55677777654211 133678999999999999988778999988 77632 112333211100 1112233321
Q ss_pred ccccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 115 NTLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 115 n~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
.. -.+.+-.+|-+|..| +..|...|+ ++ ....+|| ..+
T Consensus 80 ~~--------p~~~V~~aCaSG~~A-l~~A~~~I~--sG--~~d~vLv~G~E 118 (391)
T PRK07661 80 TV--------PAITINRYCSSGLQS-IAYGAERIM--LG--HSEAVIAGGAE 118 (391)
T ss_pred Cc--------ceeehhhhhhHHHHH-HHHHHHHHH--cC--CCCEEEEEEEe
Confidence 12 234666799999999 888888896 43 3467777 655
No 170
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=44.44 E-value=38 Score=39.51 Aligned_cols=92 Identities=11% Similarity=0.071 Sum_probs=57.9
Q ss_pred CccHHHHHHHHHHHHHHhc-cCCHHhhcccccccCCccccccccc-ccchhhhhhcc-cccccCccccccCcchhhhhhh
Q psy11265 54 LEDINSICLTVVSNLMKRY-ELDYAQIGQLLQVESPEEYEQESWQ-LTEAEKLASIP-KLKEDGNTLYKAGNIQGALDKY 130 (945)
Q Consensus 54 ~EDivsla~~a~~~Ll~~~-~~~~~~Ig~l~~v~Te~~~~~s~wd-~s~~d~sk~~~-~l~~~Gn~lyk~~~~~~~~e~k 130 (945)
..++..|+..|++.+|++. +++|++|+.+ .+|... ..|. +.. ...-.. ........ ..+.+-
T Consensus 22 ~~~~~~L~~~a~~~al~~~agl~~~~Id~v-~~G~~~----~~~~~g~~--~ar~~~~~~g~~~~~--------p~~tV~ 86 (385)
T TIGR02445 22 NTRAEDLSAHLMSKLLARNPKVDPAEVEDI-YWGCVQ----QTLEQGFN--IARNAALLAQIPHTS--------AAVTVN 86 (385)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHcCEE-EEeccc----ccccccch--HHHHHHHHCCCCCCc--------chhhhh
Confidence 5677899999999999975 8999999999 777551 1222 111 111111 11111112 345677
Q ss_pred hhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 131 STALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 131 ~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
++|-+|..| +..|...|+ ++ ...-+|| ..+
T Consensus 87 ~~CaSG~~A-i~~Aa~~I~--sG--~~d~vlagG~E 117 (385)
T TIGR02445 87 RLCGSSMQA-LHDAARAIM--TG--DADVCLVGGVE 117 (385)
T ss_pred hhhHHHHHH-HHHHHHHHH--CC--CCCEEEEeeeh
Confidence 899999999 888888886 33 2345565 544
No 171
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=44.25 E-value=30 Score=40.52 Aligned_cols=109 Identities=9% Similarity=-0.037 Sum_probs=64.8
Q ss_pred chhccCCccccCCC---CCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCc
Q psy11265 39 YTIGLGQAKMGFCS---DLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGN 115 (945)
Q Consensus 39 yt~GLGq~~m~~~~---~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn 115 (945)
|-+|-+++.++=-. ...++..|+..|++.+|++.+++|++|+.+ .+|.- .....|.+..+-...... +++-+
T Consensus 5 ~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~a~l~~~~Id~v-i~G~~--~~~~~~~~~~ar~~~l~~--gl~~~ 79 (390)
T PRK06504 5 YIVAAARTAGGRKGGRLAGWHPADLAAQVLDALVDRSGADPALIEDV-IMGCV--SQVGEQATNVARNAVLAS--KLPES 79 (390)
T ss_pred EEEEcccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEec--cccccccccHHHHHHHHc--CCCCC
Confidence 45566666654321 155688999999999999999999999999 77633 111122111100000001 11111
Q ss_pred cccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 116 TLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 116 ~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
. -.+.+-.+|-+|..| +..|...|+ ++ ...-+|| ..+
T Consensus 80 v--------P~~tV~~~CaSG~~A-i~~A~~~I~--sG--~~dvvLagGvE 117 (390)
T PRK06504 80 V--------PGTSIDRQCGSSQQA-LHFAAQAVM--SG--TMDIVIAAGVE 117 (390)
T ss_pred C--------ceEEEechhhHHHHH-HHHHHHHHH--CC--CCCEEEEeeee
Confidence 2 234566789999999 888888886 43 2345666 443
No 172
>PRK07855 lipid-transfer protein; Provisional
Probab=43.22 E-value=24 Score=41.15 Aligned_cols=99 Identities=7% Similarity=-0.039 Sum_probs=63.6
Q ss_pred chhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCcccc
Q psy11265 39 YTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLY 118 (945)
Q Consensus 39 yt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~ly 118 (945)
+-+|.||...+-- +..+...|++.|+++.|++-+|++++|+-+ .+++. +... .......++..+..
T Consensus 7 ~IvG~g~t~~~r~-~~~~~~~L~~eA~~~Al~DAgl~~~dID~~-~~~~~--------~~~~--~~~l~~~lGl~~~~-- 72 (386)
T PRK07855 7 AIVGIGATEFSKN-SGRSELRLACEAVLAALDDAGLAPSDVDGL-VTFTM--------DTNP--EIAVARALGIGELK-- 72 (386)
T ss_pred EEEEeeecccccC-CCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEecC--------cccc--HHHHHHHCCCCCCc--
Confidence 5679999876543 345789999999999999999999999988 34322 1110 11112334432211
Q ss_pred ccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee
Q psy11265 119 KAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV 162 (945)
Q Consensus 119 k~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV 162 (945)
. ...+..+|-++..+ +..|...|+ ++ .-..+||
T Consensus 73 ---~---~~~v~~gg~sg~~~-~~~A~~~I~--sG--~~d~vLv 105 (386)
T PRK07855 73 ---F---FSRIHYGGGAACAT-VQQAAMAVA--TG--VADVVVC 105 (386)
T ss_pred ---c---eeeecCCcHHHHHH-HHHHHHHHH--CC--CCCEEEE
Confidence 1 11344689988888 888888886 43 3467777
No 173
>PF13181 TPR_8: Tetratricopeptide repeat; PDB: 3GW4_B 3MA5_C 2KCV_A 2KCL_A 3FP3_A 3LCA_A 3FP4_A 3FP2_A 1W3B_B 1ELW_A ....
Probab=41.92 E-value=9.1 Score=27.73 Aligned_cols=32 Identities=19% Similarity=0.274 Sum_probs=28.3
Q ss_pred ceehhhhhcccccchhHHHHhhhhhhccCCCC
Q psy11265 906 ILLNYSQCKLDQKDYYSVIEHTTTVLTYDPEG 937 (945)
Q Consensus 906 l~lny~qc~l~~~~yy~v~~h~~~~l~~~~~~ 937 (945)
++.+.++|+..+|+|-+.+++-.+.++.+|||
T Consensus 3 ~~~~lg~~y~~~~~~~~A~~~~~~a~~~~~~n 34 (34)
T PF13181_consen 3 AYYNLGKIYEQLGDYEEALEYFEKALELNPDN 34 (34)
T ss_dssp HHHHHHHHHHHTTSHHHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 45678999999999999999999999999975
No 174
>PF04212 MIT: MIT (microtubule interacting and transport) domain; InterPro: IPR007330 The MIT domain is found in vacuolar sorting proteins, spastin (probable ATPase involved in the assembly or function of nuclear protein complexes), and a sorting nexin, which may play a role in intracellular trafficking.; PDB: 2DL1_A 2JQK_A 1WR0_A 2CPT_A 2JQH_A 2V6Y_A 2JQ9_A 2K3W_A 1YXR_A 3EAB_E ....
Probab=41.65 E-value=27 Score=30.28 Aligned_cols=36 Identities=31% Similarity=0.432 Sum_probs=27.6
Q ss_pred hhHhcccccccccHHHHHHHHHHHHHHHHhhhhccc
Q psy11265 440 LKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLKQT 475 (945)
Q Consensus 440 ~Ke~GN~~fK~g~y~~A~~kY~rAl~~Le~~~~~e~ 475 (945)
+-.+|-.+=+.|+|..|+..|.+|+.+|......++
T Consensus 8 ~~~~Av~~D~~g~~~~A~~~Y~~ai~~l~~~~~~~~ 43 (69)
T PF04212_consen 8 LIKKAVEADEAGNYEEALELYKEAIEYLMQALKSES 43 (69)
T ss_dssp HHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhccCC
Confidence 334455555689999999999999999987765553
No 175
>PF13374 TPR_10: Tetratricopeptide repeat; PDB: 3CEQ_B 3EDT_H 3NF1_A.
Probab=41.59 E-value=23 Score=26.37 Aligned_cols=32 Identities=28% Similarity=0.312 Sum_probs=24.8
Q ss_pred hhhHhcccccccccHHHHHHHHHHHHHHHHhh
Q psy11265 439 KLKEDGNTLYKAGNIQGALDKYSTALGYLEQL 470 (945)
Q Consensus 439 ~~Ke~GN~~fK~g~y~~A~~kY~rAl~~Le~~ 470 (945)
.+..-|+.++.+|+|.+|...|++|+.+-+.+
T Consensus 4 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 35 (42)
T PF13374_consen 4 ALNNLANAYRAQGRYEEALELLEEALEIRERL 35 (42)
T ss_dssp HHHHHHHHHHHCT-HHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHhhhhcchhhHHHHHHHHHHHHH
Confidence 45567889999999999999999999987655
No 176
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=41.47 E-value=27 Score=40.92 Aligned_cols=81 Identities=6% Similarity=-0.006 Sum_probs=53.0
Q ss_pred CccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhhhh
Q psy11265 54 LEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYSTA 133 (945)
Q Consensus 54 ~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~ac 133 (945)
.--...|+..|++.+|++.+++|++|+.+ .+|.-. ..+++...- ......++.+.+. -.+.+-++|
T Consensus 24 ~~~~~~L~~~a~~~al~~agi~~~~Id~v-v~G~~~----~~~~g~~~~-r~~~~~~Gl~~~~--------p~~~V~~~C 89 (392)
T PRK06633 24 TTPAPMLAAHLIKDILQNSKIDPALVNEV-ILGQVI----TGGSGQNPA-RQTLIHAGIPKEV--------PGYTINKVC 89 (392)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHcCEE-EEEecC----ccccccHHH-HHHHHHCCCCCCc--------cchhhcchh
Confidence 34578899999999999999999999998 776331 112211111 1112223333222 344566799
Q ss_pred hhHHHHHHhhccceEE
Q psy11265 134 LGYLEQLMLNSMFSIH 149 (945)
Q Consensus 134 yg~t~alL~~a~~~i~ 149 (945)
-+|..| +..|...|+
T Consensus 90 aSG~~A-i~~A~~~I~ 104 (392)
T PRK06633 90 GSGLKS-VALAANSIM 104 (392)
T ss_pred HHHHHH-HHHHHHHHH
Confidence 999999 888888886
No 177
>cd02683 MIT_1 MIT: domain contained within Microtubule Interacting and Trafficking molecules. This sub-family of MIT domains is found in proteins with unknown function, co-occuring with an as yet undescribed domain. The molecular function of the MIT domain is unclear.
Probab=39.70 E-value=29 Score=31.21 Aligned_cols=39 Identities=21% Similarity=0.221 Sum_probs=31.4
Q ss_pred chhhHhcccccccccHHHHHHHHHHHHHHHHhhhhcccc
Q psy11265 438 PKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLKQTF 476 (945)
Q Consensus 438 ~~~Ke~GN~~fK~g~y~~A~~kY~rAl~~Le~~~~~e~~ 476 (945)
..+-.+++++=+.|+|.+|+..|..|+.+|-....-+|+
T Consensus 7 ~~l~~~Ave~D~~g~y~eAl~~Y~~aie~l~~~lk~e~d 45 (77)
T cd02683 7 KEVLKRAVELDQEGRFQEALVCYQEGIDLLMQVLKGTKD 45 (77)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 344456678888999999999999999999877655655
No 178
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=39.11 E-value=19 Score=39.74 Aligned_cols=82 Identities=12% Similarity=0.024 Sum_probs=50.1
Q ss_pred CCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhhh
Q psy11265 53 DLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYST 132 (945)
Q Consensus 53 ~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~a 132 (945)
.......|++.|++.+|++.+++|++|+.+ .+|+-.. ... +..+-...+ -..+.+... -++.+-++
T Consensus 22 ~~~~~~~L~~~a~~~al~~~~i~~~~Id~v-~~G~~~~---~~~-g~~~ar~~~-l~aGl~~~v--------p~~~V~~~ 87 (264)
T PF00108_consen 22 ADVSPEDLAAEAVKAALERAGIDPEDIDAV-IVGNVLQ---EGE-GQNIARQAA-LAAGLPESV--------PATTVNRA 87 (264)
T ss_dssp TTS-HHHHHHHHHHHHHHHHTSHGGGEEEE-EEE-SSS---CTT-TCHHHHHHH-HHTTS-TTS--------EEEEEE-G
T ss_pred CCCCHHHHHHHHHHHHHHhcccchhhhhhc-Ccccccc---ccc-chhhhhhhh-hhccccccc--------ceeeehhh
Confidence 345678999999999999999999999999 7776510 000 111100000 011111111 23456678
Q ss_pred hhhHHHHHHhhccceEE
Q psy11265 133 ALGYLEQLMLNSMFSIH 149 (945)
Q Consensus 133 cyg~t~alL~~a~~~i~ 149 (945)
|-+|..| +..|...|+
T Consensus 88 CaSG~~A-v~~a~~~I~ 103 (264)
T PF00108_consen 88 CASGLQA-VHLAAMAIA 103 (264)
T ss_dssp GGHHHHH-HHHHHHHHH
T ss_pred hhHHHHH-HHHhhhhhc
Confidence 9999999 888888886
No 179
>PF13428 TPR_14: Tetratricopeptide repeat
Probab=38.82 E-value=15 Score=28.76 Aligned_cols=34 Identities=12% Similarity=0.055 Sum_probs=31.0
Q ss_pred ceehhhhhcccccchhHHHHhhhhhhccCCCCce
Q psy11265 906 ILLNYSQCKLDQKDYYSVIEHTTTVLTYDPEGTV 939 (945)
Q Consensus 906 l~lny~qc~l~~~~yy~v~~h~~~~l~~~~~~~~ 939 (945)
..+++++.+..+|++=+.++....+|+.+|+|..
T Consensus 3 ~~~~la~~~~~~G~~~~A~~~~~~~l~~~P~~~~ 36 (44)
T PF13428_consen 3 AWLALARAYRRLGQPDEAERLLRRALALDPDDPE 36 (44)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCHH
Confidence 3578999999999999999999999999999963
No 180
>PF13371 TPR_9: Tetratricopeptide repeat
Probab=38.13 E-value=19 Score=30.67 Aligned_cols=35 Identities=17% Similarity=0.377 Sum_probs=31.6
Q ss_pred ccceehhhhhcccccchhHHHHhhhhhhccCCCCc
Q psy11265 904 IPILLNYSQCKLDQKDYYSVIEHTTTVLTYDPEGT 938 (945)
Q Consensus 904 ~pl~lny~qc~l~~~~yy~v~~h~~~~l~~~~~~~ 938 (945)
.-+.++++.|+..+|+|=+.++..+.+|+.+|++.
T Consensus 29 ~~~~~~~a~~~~~~g~~~~A~~~l~~~l~~~p~~~ 63 (73)
T PF13371_consen 29 PELWLQRARCLFQLGRYEEALEDLERALELSPDDP 63 (73)
T ss_pred chhhHHHHHHHHHhccHHHHHHHHHHHHHHCCCcH
Confidence 34677899999999999999999999999999875
No 181
>smart00028 TPR Tetratricopeptide repeats. Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.
Probab=37.80 E-value=16 Score=24.13 Aligned_cols=31 Identities=29% Similarity=0.420 Sum_probs=27.6
Q ss_pred eehhhhhcccccchhHHHHhhhhhhccCCCC
Q psy11265 907 LLNYSQCKLDQKDYYSVIEHTTTVLTYDPEG 937 (945)
Q Consensus 907 ~lny~qc~l~~~~yy~v~~h~~~~l~~~~~~ 937 (945)
..|.+.|+..+++|=+++.+....|+.+|++
T Consensus 4 ~~~~a~~~~~~~~~~~a~~~~~~~~~~~~~~ 34 (34)
T smart00028 4 LYNLGNAYLKLGDYDEALEYYEKALELDPNN 34 (34)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHccCCCC
Confidence 4578999999999999999999999988864
No 182
>cd02684 MIT_2 MIT: domain contained within Microtubule Interacting and Trafficking molecules. This sub-family of MIT domains is found in proteins with an n-terminal serine/threonine kinase domain. The molecular function of the MIT domain is unclear.
Probab=36.40 E-value=34 Score=30.62 Aligned_cols=42 Identities=21% Similarity=0.199 Sum_probs=32.8
Q ss_pred hccchhhHhcccccccccHHHHHHHHHHHHHHHHhhhhcccc
Q psy11265 435 ASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLKQTF 476 (945)
Q Consensus 435 ~~a~~~Ke~GN~~fK~g~y~~A~~kY~rAl~~Le~~~~~e~~ 476 (945)
+.|..+-.+|...=+.|+|.+|...|..||.++-.....+++
T Consensus 4 ~~Ai~lv~~Av~~D~~g~y~eA~~lY~~ale~~~~~~k~e~~ 45 (75)
T cd02684 4 EKAIALVVQAVKKDQRGDAAAALSLYCSALQYFVPALHYETD 45 (75)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 345556667788888999999999999999999766644544
No 183
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=36.26 E-value=39 Score=39.54 Aligned_cols=103 Identities=10% Similarity=0.042 Sum_probs=65.7
Q ss_pred cchhccCCccccCCCCCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCccc
Q psy11265 38 KYTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTL 117 (945)
Q Consensus 38 Kyt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~l 117 (945)
-+-+|.||+.++-- ...++..|++.|+..-|++-+|++++|+-+ .+... .+.+ ........++..+.
T Consensus 7 vaIvG~g~t~~~~~-~~~~~~~L~~eA~~~Al~DAgl~~~dID~~-~~~~~----~~~~-----~~~~~~~~lGl~~~-- 73 (388)
T PRK08142 7 AYIVGAYEHPTRKA-PDKSVAQLHAEVAKGALADAGLSLADVDGY-FCAGD----APGL-----GPASMVDYLGLKLR-- 73 (388)
T ss_pred EEEEEEeeccceeC-CCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEcCC----CCCc-----cHHHHHHhCCCCCe--
Confidence 36789999997765 346789999999999999999999999987 33221 0000 11111223333211
Q ss_pred cccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 118 YKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 118 yk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
....+-.+|-++..+ +..|...|+ ++ .-..+|| ..+
T Consensus 74 -------~~~~v~~gg~s~~~a-~~~A~~~I~--sG--~~d~vLvvg~e 110 (388)
T PRK08142 74 -------HVDSTETGGSSYLAH-VGHAAQAIA--AG--KCSVALITLAG 110 (388)
T ss_pred -------eeccccCCcHHHHHH-HHHHHHHHH--cC--CCCEEEEEeee
Confidence 122344578888887 888888886 43 3466776 544
No 184
>cd02678 MIT_VPS4 MIT: domain contained within Microtubule Interacting and Trafficking molecules. This sub-family of MIT domains is found in intracellular protein transport proteins of the AAA-ATPase family. The molecular function of the MIT domain is unclear.
Probab=36.23 E-value=38 Score=30.08 Aligned_cols=42 Identities=24% Similarity=0.239 Sum_probs=32.9
Q ss_pred hccchhhHhcccccccccHHHHHHHHHHHHHHHHhhhhcccc
Q psy11265 435 ASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLKQTF 476 (945)
Q Consensus 435 ~~a~~~Ke~GN~~fK~g~y~~A~~kY~rAl~~Le~~~~~e~~ 476 (945)
+.|..+-.+|...=+.|+|.+|...|..|+.++-.....+++
T Consensus 4 ~~A~~l~~~Av~~D~~g~y~eA~~~Y~~aie~l~~~~k~e~~ 45 (75)
T cd02678 4 QKAIELVKKAIEEDNAGNYEEALRLYQHALEYFMHALKYEKN 45 (75)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 345556667788888999999999999999999776655554
No 185
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=35.74 E-value=29 Score=40.42 Aligned_cols=95 Identities=9% Similarity=-0.067 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHhccCCHHhhcc---cccccCCccccccccccc--------------chhhhhhcccccccCccccc
Q psy11265 57 INSICLTVVSNLMKRYELDYAQIGQ---LLQVESPEEYEQESWQLT--------------EAEKLASIPKLKEDGNTLYK 119 (945)
Q Consensus 57 ivsla~~a~~~Ll~~~~~~~~~Ig~---l~~v~Te~~~~~s~wd~s--------------~~d~sk~~~~l~~~Gn~lyk 119 (945)
...|++.|+.+.|++-++++++|.. -+.++|..--....+... ....+.....+...|.+
T Consensus 87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~g~~--- 163 (424)
T smart00825 87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLRGPS--- 163 (424)
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCCCCc---
Confidence 3569999999999999999988862 225665410000000000 00000011223333333
Q ss_pred cCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 120 AGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 120 ~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
+.+..+|-++..| |..|..+|+ ++ .-..+|| ++|.
T Consensus 164 -------~~v~~acasg~~A-l~~A~~~I~--~G--~~d~vlvgg~~~ 199 (424)
T smart00825 164 -------VTVDTACSSSLVA-LHLACQSLR--SG--ECDMALAGGVNL 199 (424)
T ss_pred -------cccccHhHHHHHH-HHHHHHHHH--cC--CCCeeEEeeeee
Confidence 4566799999999 999999997 43 3457788 7664
No 186
>TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70).
Probab=35.22 E-value=17 Score=44.78 Aligned_cols=33 Identities=30% Similarity=0.456 Sum_probs=30.9
Q ss_pred ceehhhhhcccccchhHHHHhhhhhhccCCCCc
Q psy11265 906 ILLNYSQCKLDQKDYYSVIEHTTTVLTYDPEGT 938 (945)
Q Consensus 906 l~lny~qc~l~~~~yy~v~~h~~~~l~~~~~~~ 938 (945)
+.+|.++|++.+|+|-++|+.|+.+|+.+|++.
T Consensus 162 ~~~n~a~~~~~l~~~~~Ai~~~~~al~l~p~~~ 194 (615)
T TIGR00990 162 YYSNRAACHNALGDWEKVVEDTTAALELDPDYS 194 (615)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCH
Confidence 478999999999999999999999999999874
No 187
>PF13424 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 4A1S_B 3CEQ_B 3EDT_H ....
Probab=35.02 E-value=32 Score=29.71 Aligned_cols=35 Identities=29% Similarity=0.266 Sum_probs=28.1
Q ss_pred cchhhHhcccccccccHHHHHHHHHHHHHHHHhhh
Q psy11265 437 IPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLM 471 (945)
Q Consensus 437 a~~~Ke~GN~~fK~g~y~~A~~kY~rAl~~Le~~~ 471 (945)
+..+..-|..++..|+|.+|+..|++|+.+.+...
T Consensus 5 a~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~ 39 (78)
T PF13424_consen 5 ANAYNNLARVYRELGRYDEALDYYEKALDIEEQLG 39 (78)
T ss_dssp HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHC
Confidence 44566788999999999999999999999854443
No 188
>smart00745 MIT Microtubule Interacting and Trafficking molecule domain.
Probab=32.03 E-value=48 Score=29.18 Aligned_cols=39 Identities=23% Similarity=0.279 Sum_probs=29.1
Q ss_pred chhhHhcccccccccHHHHHHHHHHHHHHHHhhhhcccc
Q psy11265 438 PKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLKQTF 476 (945)
Q Consensus 438 ~~~Ke~GN~~fK~g~y~~A~~kY~rAl~~Le~~~~~e~~ 476 (945)
..+-.+|...=+.|+|.+|+..|..|+..|......+++
T Consensus 9 ~~li~~Av~~d~~g~~~eAl~~Y~~a~e~l~~~~~~~~~ 47 (77)
T smart00745 9 KELISKALKADEAGDYEEALELYKKAIEYLLEGIKVESD 47 (77)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhccCCC
Confidence 334445566666899999999999999999776655544
No 189
>PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional
Probab=31.15 E-value=32 Score=39.55 Aligned_cols=30 Identities=17% Similarity=0.343 Sum_probs=27.1
Q ss_pred cchhhHhcccccccccHHHHHHHHHHHHHH
Q psy11265 437 IPKLKEDGNTLYKAGNIQGALDKYSTALGY 466 (945)
Q Consensus 437 a~~~Ke~GN~~fK~g~y~~A~~kY~rAl~~ 466 (945)
+..++.+|+.+|+.|+|..|+..|++|+..
T Consensus 2 ~~~l~~~a~~a~~~~~~~~Ai~~~~~Al~~ 31 (356)
T PLN03088 2 AKDLEDKAKEAFVDDDFALAVDLYTQAIDL 31 (356)
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 456888999999999999999999999974
No 190
>PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B.
Probab=30.89 E-value=29 Score=28.89 Aligned_cols=23 Identities=26% Similarity=0.491 Sum_probs=12.6
Q ss_pred hcccccccccHHHHHHHHHHHHH
Q psy11265 443 DGNTLYKAGNIQGALDKYSTALG 465 (945)
Q Consensus 443 ~GN~~fK~g~y~~A~~kY~rAl~ 465 (945)
.|+.+++.|+|..|+..|++++.
T Consensus 3 ~a~~~~~~g~~~~A~~~~~~~l~ 25 (65)
T PF13432_consen 3 LARALYQQGDYDEAIAAFEQALK 25 (65)
T ss_dssp HHHHHHHCTHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHH
Confidence 45555555555555555555543
No 191
>PF14853 Fis1_TPR_C: Fis1 C-terminal tetratricopeptide repeat; PDB: 1IYG_A 1PC2_A 1NZN_A 3UUX_C 1Y8M_A 2PQR_A 2PQN_A 3O48_A.
Probab=30.84 E-value=25 Score=29.48 Aligned_cols=27 Identities=11% Similarity=0.207 Sum_probs=22.1
Q ss_pred hhcccccchhHHHHhhhhhhccCCCCc
Q psy11265 912 QCKLDQKDYYSVIEHTTTVLTYDPEGT 938 (945)
Q Consensus 912 qc~l~~~~yy~v~~h~~~~l~~~~~~~ 938 (945)
.....+|||=+..+.|..+|+.+|+|.
T Consensus 9 ig~ykl~~Y~~A~~~~~~lL~~eP~N~ 35 (53)
T PF14853_consen 9 IGHYKLGEYEKARRYCDALLEIEPDNR 35 (53)
T ss_dssp HHHHHTT-HHHHHHHHHHHHHHTTS-H
T ss_pred HHHHHhhhHHHHHHHHHHHHhhCCCcH
Confidence 345678999999999999999999996
No 192
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=30.78 E-value=52 Score=38.47 Aligned_cols=105 Identities=8% Similarity=-0.027 Sum_probs=62.6
Q ss_pred chhccCCccccC-CC--CCccHHHHHHHHHHHHHHhccCCHHhhcccccccCCcccccccccccchhhhhhcccccccCc
Q psy11265 39 YTIGLGQAKMGF-CS--DLEDINSICLTVVSNLMKRYELDYAQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGN 115 (945)
Q Consensus 39 yt~GLGq~~m~~-~~--~~EDivsla~~a~~~Ll~~~~~~~~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn 115 (945)
|-+|.|++.++= .. ...+...|++.|++.+|++.++++++|+.+ .++.-.. .+.+... .......++...+
T Consensus 4 ~IvG~~~Tp~g~~~~~~~~~~~~~L~~~a~~~al~dAgl~~~~ID~v-v~g~~~~----~~~~~~~-~~~~~~~~Gl~~~ 77 (394)
T PLN02644 4 CIVGVARTPIGGFLGSLSSLSATELGSIAIQAALERAGVDPALVQEV-FFGNVLS----ANLGQAP-ARQAALGAGLPPS 77 (394)
T ss_pred EEEeeccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE-EEEecCc----CCcCCcH-HHHHHHhcCCCCC
Confidence 445677776442 11 236689999999999999999999999998 6664311 1111111 1011122222111
Q ss_pred cccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee
Q psy11265 116 TLYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV 162 (945)
Q Consensus 116 ~lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV 162 (945)
. -...+-.+|-++..+ +..|...|+ ++ -..-+||
T Consensus 78 ~--------p~~~v~~~caSg~~a-v~~Aa~~I~--sG--~~d~vlv 111 (394)
T PLN02644 78 T--------ICTTVNKVCASGMKA-VMLAAQSIQ--LG--INDVVVA 111 (394)
T ss_pred C--------ceEEEeccchHHHHH-HHHHHHHHH--cC--CCCEEEE
Confidence 1 112244579999999 888888886 43 2356666
No 193
>cd02681 MIT_calpain7_1 MIT: domain contained within Microtubule Interacting and Trafficking molecules. This sub-family of MIT domains is found in the nuclear thiol protease PalBH. The molecular function of the MIT domain is unclear.
Probab=30.44 E-value=43 Score=30.17 Aligned_cols=34 Identities=15% Similarity=0.003 Sum_probs=26.5
Q ss_pred chhhHhcccccccccHHHHHHHHHHHHHHHHhhh
Q psy11265 438 PKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLM 471 (945)
Q Consensus 438 ~~~Ke~GN~~fK~g~y~~A~~kY~rAl~~Le~~~ 471 (945)
..+-.+.-++=++|+|.+|+..|..|+++|-...
T Consensus 7 i~~a~~Ave~D~~g~y~eA~~~Y~~aie~l~~~~ 40 (76)
T cd02681 7 VQFARLAVQRDQEGRYSEAVFYYKEAAQLLIYAE 40 (76)
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 3344455666788999999999999999996643
No 194
>KOG0376|consensus
Probab=30.30 E-value=32 Score=40.93 Aligned_cols=31 Identities=32% Similarity=0.382 Sum_probs=28.7
Q ss_pred ccchhhHhcccccccccHHHHHHHHHHHHHH
Q psy11265 436 SIPKLKEDGNTLYKAGNIQGALDKYSTALGY 466 (945)
Q Consensus 436 ~a~~~Ke~GN~~fK~g~y~~A~~kY~rAl~~ 466 (945)
.++.+|.++|.+|+.++|..|+..|.+|+++
T Consensus 3 ~a~e~k~ean~~l~~~~fd~avdlysKaI~l 33 (476)
T KOG0376|consen 3 SAEELKNEANEALKDKVFDVAVDLYSKAIEL 33 (476)
T ss_pred hhhhhhhHHhhhcccchHHHHHHHHHHHHhc
Confidence 4678899999999999999999999999984
No 195
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=30.15 E-value=44 Score=39.05 Aligned_cols=101 Identities=9% Similarity=0.058 Sum_probs=62.7
Q ss_pred chhccCCccccCCCCCccHHHHHHHHHHHHHHhcc-CCH-HhhcccccccCCcccccccccccchhhhhhcccccccCcc
Q psy11265 39 YTIGLGQAKMGFCSDLEDINSICLTVVSNLMKRYE-LDY-AQIGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNT 116 (945)
Q Consensus 39 yt~GLGq~~m~~~~~~EDivsla~~a~~~Ll~~~~-~~~-~~Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~ 116 (945)
|-+|+|++..+--.+..+.-.|++.|+...|++-+ |++ ++|+-+ .+++. +.|++..+-..-....+...+..
T Consensus 7 aIvG~g~t~~~~~~~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~-~~~~~-----~~~~~~~~~~~~~~~~lg~~~~~ 80 (385)
T PRK06066 7 AIVGIGWYGFRPTTPEVSFREMMFEAASRAYKDAGNINPRRDVDSF-ISCQE-----DFWEGIAIADEFAPDQIGGAMRP 80 (385)
T ss_pred EEEEeeecCCcCCCCCCCHHHHHHHHHHHHHHhcCCCCChhcCCEE-EEecC-----cccCcccccchhHHHHcccCCCC
Confidence 56899999966334467889999999999999999 997 799888 55542 23322211111111223221111
Q ss_pred ccccCcchhhhhhhhhhhhHHHHHHhhccceEEeecccCCCcceee
Q psy11265 117 LYKAGNIQGALDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV 162 (945)
Q Consensus 117 lyk~~~~~~~~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV 162 (945)
..+ + |.++..+ +..|...|+ ++ .-..+||
T Consensus 81 ------~~~---v---~~sg~~a-~~~A~~aV~--sG--~~d~vLv 109 (385)
T PRK06066 81 ------TMT---V---AGDGLQG-LAHAVMHIN--SG--LANVVVV 109 (385)
T ss_pred ------eEE---E---eCcHHHH-HHHHHHHHH--cC--CCCEEEE
Confidence 012 1 7788888 788888886 43 3366777
No 196
>PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B.
Probab=30.07 E-value=22 Score=29.58 Aligned_cols=34 Identities=15% Similarity=0.163 Sum_probs=28.9
Q ss_pred ccceehhhhhcccccchhHHHHhhhhhhccCCCC
Q psy11265 904 IPILLNYSQCKLDQKDYYSVIEHTTTVLTYDPEG 937 (945)
Q Consensus 904 ~pl~lny~qc~l~~~~yy~v~~h~~~~l~~~~~~ 937 (945)
....+++.+|++.+|+|=+.++....+++.+|+|
T Consensus 31 ~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~ 64 (65)
T PF13432_consen 31 PEAWYLLGRILYQQGRYDEALAYYERALELDPDN 64 (65)
T ss_dssp HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 4467889999999999999999999999999987
No 197
>cd02656 MIT MIT: domain contained within Microtubule Interacting and Trafficking molecules. The MIT domain is found in sorting nexins, the nuclear thiol protease PalBH, the AAA protein spastin and archaebacterial proteins with similar domain architecture, vacuolar sorting proteins and others. The molecular function of the MIT domain is unclear.
Probab=29.13 E-value=58 Score=28.65 Aligned_cols=40 Identities=28% Similarity=0.319 Sum_probs=29.6
Q ss_pred cchhhHhcccccccccHHHHHHHHHHHHHHHHhhhhcccc
Q psy11265 437 IPKLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLKQTF 476 (945)
Q Consensus 437 a~~~Ke~GN~~fK~g~y~~A~~kY~rAl~~Le~~~~~e~~ 476 (945)
|..+-.+|...=+.|+|.+|+..|..|+..|-.....+++
T Consensus 6 a~~l~~~Av~~D~~g~~~~Al~~Y~~a~e~l~~~~~~~~~ 45 (75)
T cd02656 6 AKELIKQAVKEDEDGNYEEALELYKEALDYLLQALKAEKE 45 (75)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhccCCC
Confidence 3344456666667799999999999999999776644443
No 198
>KOG0548|consensus
Probab=28.84 E-value=34 Score=41.11 Aligned_cols=30 Identities=27% Similarity=0.527 Sum_probs=27.1
Q ss_pred cchhhHhcccccccccHHHHHHHHHHHHHH
Q psy11265 437 IPKLKEDGNTLYKAGNIQGALDKYSTALGY 466 (945)
Q Consensus 437 a~~~Ke~GN~~fK~g~y~~A~~kY~rAl~~ 466 (945)
+..+|++||..|..|+|..|+..|..|+.+
T Consensus 2 a~e~k~kgnaa~s~~d~~~ai~~~t~ai~l 31 (539)
T KOG0548|consen 2 AVELKEKGNAAFSSGDFETAIRLFTEAIML 31 (539)
T ss_pred hhHHHHHHHhhcccccHHHHHHHHHHHHcc
Confidence 467899999999999999999999999873
No 199
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=27.19 E-value=52 Score=37.94 Aligned_cols=35 Identities=3% Similarity=-0.132 Sum_probs=26.5
Q ss_pred hhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 127 LDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 127 ~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
+.+-.+|-++..| |..|..+|+ ++ .-..+|| +.|.
T Consensus 155 ~~v~~acas~~~A-l~~A~~~i~--~G--~~d~aLvgg~d~ 190 (406)
T cd00834 155 YTVSTACASGAHA-IGDAARLIR--LG--RADVVIAGGAEA 190 (406)
T ss_pred cccchHHHHHHHH-HHHHHHHHH--cC--CCCEEEEcCccc
Confidence 3455689999999 999999997 32 3467888 7764
No 200
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=27.11 E-value=56 Score=38.89 Aligned_cols=101 Identities=11% Similarity=0.019 Sum_probs=56.4
Q ss_pred CccHHHHHHHHHHHHHHhccCCHHh--hcccccccCCcccccccccccchhhhhhcccccccCccccccCcchhhhhhhh
Q psy11265 54 LEDINSICLTVVSNLMKRYELDYAQ--IGQLLQVESPEEYEQESWQLTEAEKLASIPKLKEDGNTLYKAGNIQGALDKYS 131 (945)
Q Consensus 54 ~EDivsla~~a~~~Ll~~~~~~~~~--Ig~l~~v~Te~~~~~s~wd~s~~d~sk~~~~l~~~Gn~lyk~~~~~~~~e~k~ 131 (945)
.-++..|++.|++.+|++.++++++ |+.+ .++.- ..+.+.............++..+.. ..... .-.+.+-.
T Consensus 45 ~~s~~eL~~~a~~~al~~agl~~~d~~ID~v-i~G~~---~~~~~~~~~~~a~~~~~~~gl~~~~-~gl~~-~p~~~V~~ 118 (438)
T PTZ00455 45 NKTLEELLATAIQGTLENTGLDGKAALVDKV-VVGNF---LGELFSSQGHLGPAAVGSLGQSGAS-NALLY-KPAMRVEG 118 (438)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCcCEE-EEEec---cccccccccchHHHHHHhccCcccc-cccCC-CceeEEEC
Confidence 4467899999999999999999999 9988 66543 1111111110000111011111000 00000 01234556
Q ss_pred hhhhHHHHHHhhccceEEeecccCCCcceee-ecc
Q psy11265 132 TALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKL 165 (945)
Q Consensus 132 acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asd 165 (945)
+|-+|..| +..|...|+ ++ ...-+|| ..+
T Consensus 119 ~caSG~~A-i~~A~~~I~--sG--~~dvvlv~G~E 148 (438)
T PTZ00455 119 ACASGGLA-VQSAWEALL--AG--TSDIALVVGVE 148 (438)
T ss_pred cCHHHHHH-HHHHHHHHH--CC--CCCEEEEEEEe
Confidence 89999999 888888886 43 2355666 544
No 201
>PF08251 Mastoparan_2: Mastoparan peptide; InterPro: IPR013214 Mastoparan (MP) peptides I, II and III are extracted from the venom gland of Protopolybia exigua (Neotropical social wasp). They are tetradecapeptides presenting from seven to ten hydrophobic amino acid residues and from two to four lysine residues in their primary sequences. These peptides cause the degranulation of mast cells. Protopolybia-MP-I also causes haemolysis of erythrocytes.
Probab=25.93 E-value=19 Score=21.91 Aligned_cols=12 Identities=33% Similarity=0.722 Sum_probs=9.9
Q ss_pred hhHhhhcccccc
Q psy11265 895 DWKKLNDLKIPI 906 (945)
Q Consensus 895 ~w~~l~~~~~pl 906 (945)
.|++|.||.+-.
T Consensus 2 nwlklgk~v~d~ 13 (14)
T PF08251_consen 2 NWLKLGKMVIDA 13 (14)
T ss_pred cHHHHHHHHHhh
Confidence 699999998754
No 202
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=25.30 E-value=13 Score=40.30 Aligned_cols=26 Identities=27% Similarity=0.385 Sum_probs=21.2
Q ss_pred ccccccccceeeccccccchhHhhhh
Q psy11265 491 PENVGILGIEFYFPSQYVDQTELEKH 516 (945)
Q Consensus 491 ~~~vGI~ai~~Y~P~~~l~~~el~~~ 516 (945)
+...-|.+|+-.+|.++++|+++..+
T Consensus 12 ~g~A~Il~IgTA~P~~~~~Q~~~~e~ 37 (226)
T PF00195_consen 12 PGPAYILSIGTAVPPHRITQEEIAEF 37 (226)
T ss_dssp SSSEEEEEEEEE-SSEEEEGCCHHHH
T ss_pred CCCeEEEEEEEeCCCceecHHHHHHH
Confidence 45678999999999999999988664
No 203
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=24.42 E-value=77 Score=38.39 Aligned_cols=45 Identities=11% Similarity=0.056 Sum_probs=36.6
Q ss_pred chhccCCccccCCCCCc--cHHHHHHHHHHHHHHhccCC--HHhhcccc
Q psy11265 39 YTIGLGQAKMGFCSDLE--DINSICLTVVSNLMKRYELD--YAQIGQLL 83 (945)
Q Consensus 39 yt~GLGq~~m~~~~~~E--Divsla~~a~~~Ll~~~~~~--~~~Ig~l~ 83 (945)
+-+|.||...+--++.. +...|++.|++..|++.+++ +++|+-++
T Consensus 7 ~IVGvG~t~~~~~~~~~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~ 55 (498)
T PRK08257 7 VIVGVGQVTERPDDPAYGLEPVDLMAAAARAAAADAGADAVLEAIDSVA 55 (498)
T ss_pred EEEEeeecccccCCcccCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEE
Confidence 45699998865432222 78999999999999999999 99999883
No 204
>PF13424 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 4A1S_B 3CEQ_B 3EDT_H ....
Probab=24.38 E-value=59 Score=28.01 Aligned_cols=37 Identities=27% Similarity=0.488 Sum_probs=31.6
Q ss_pred HhhhccchhhHhcccccccccHHHHHHHHHHHHHHHH
Q psy11265 432 EKLASIPKLKEDGNTLYKAGNIQGALDKYSTALGYLE 468 (945)
Q Consensus 432 Ekl~~a~~~Ke~GN~~fK~g~y~~A~~kY~rAl~~Le 468 (945)
+....+..+-.-|+.+.+.|+++.|...|++|+++.+
T Consensus 41 ~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~i~~ 77 (78)
T PF13424_consen 41 DHPDTANTLNNLGECYYRLGDYEEALEYYQKALDIFE 77 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhc
Confidence 4445577888899999999999999999999998764
No 205
>KOG0551|consensus
Probab=23.76 E-value=26 Score=39.95 Aligned_cols=38 Identities=21% Similarity=0.330 Sum_probs=34.7
Q ss_pred cccccceehhhhhcccccchhHHHHhhhhhhccCCCCc
Q psy11265 901 DLKIPILLNYSQCKLDQKDYYSVIEHTTTVLTYDPEGT 938 (945)
Q Consensus 901 ~~~~pl~lny~qc~l~~~~yy~v~~h~~~~l~~~~~~~ 938 (945)
++..-|.-|.+-|.|..|.|=.+|+-||..|..+|+++
T Consensus 116 dlnavLY~NRAAa~~~l~NyRs~l~Dcs~al~~~P~h~ 153 (390)
T KOG0551|consen 116 DLNAVLYTNRAAAQLYLGNYRSALNDCSAALKLKPTHL 153 (390)
T ss_pred cHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCcchh
Confidence 35567899999999999999999999999999999875
No 206
>cd02677 MIT_SNX15 MIT: domain contained within Microtubule Interacting and Trafficking molecules. This MIT domain sub-family is found in sorting nexin 15 and related proteins. The molecular function of the MIT domain is unclear.
Probab=21.88 E-value=83 Score=28.23 Aligned_cols=38 Identities=13% Similarity=0.132 Sum_probs=28.2
Q ss_pred hhhHhcccccccccHHHHHHHHHHHHHHHHhhhhcccc
Q psy11265 439 KLKEDGNTLYKAGNIQGALDKYSTALGYLEQLMLKQTF 476 (945)
Q Consensus 439 ~~Ke~GN~~fK~g~y~~A~~kY~rAl~~Le~~~~~e~~ 476 (945)
.+-.++++.=+.|+|.+|...|..|++++-.....+++
T Consensus 8 ~l~~~Ave~d~~~~y~eA~~~Y~~~i~~~~~~~k~e~~ 45 (75)
T cd02677 8 ELIRLALEKEEEGDYEAAFEFYRAGVDLLLKGVQGDSS 45 (75)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCC
Confidence 33445566667799999999999999999765544443
No 207
>PRK15359 type III secretion system chaperone protein SscB; Provisional
Probab=21.85 E-value=50 Score=32.71 Aligned_cols=33 Identities=9% Similarity=-0.055 Sum_probs=29.4
Q ss_pred ceehhhhhcccccchhHHHHhhhhhhccCCCCc
Q psy11265 906 ILLNYSQCKLDQKDYYSVIEHTTTVLTYDPEGT 938 (945)
Q Consensus 906 l~lny~qc~l~~~~yy~v~~h~~~~l~~~~~~~ 938 (945)
.+.|.++|++.+|++-+.|++....|+..|+|.
T Consensus 94 a~~~lg~~l~~~g~~~eAi~~~~~Al~~~p~~~ 126 (144)
T PRK15359 94 PVYQTGVCLKMMGEPGLAREAFQTAIKMSYADA 126 (144)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh
Confidence 457889999999999999999999999999884
No 208
>PF13428 TPR_14: Tetratricopeptide repeat
Probab=21.11 E-value=71 Score=24.90 Aligned_cols=25 Identities=16% Similarity=0.077 Sum_probs=21.3
Q ss_pred HhcccccccccHHHHHHHHHHHHHH
Q psy11265 442 EDGNTLYKAGNIQGALDKYSTALGY 466 (945)
Q Consensus 442 e~GN~~fK~g~y~~A~~kY~rAl~~ 466 (945)
.-|..+...|++.+|++.|++++..
T Consensus 6 ~la~~~~~~G~~~~A~~~~~~~l~~ 30 (44)
T PF13428_consen 6 ALARAYRRLGQPDEAERLLRRALAL 30 (44)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4567788899999999999999983
No 209
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=20.64 E-value=1.1e+02 Score=35.98 Aligned_cols=35 Identities=11% Similarity=0.079 Sum_probs=27.5
Q ss_pred hhhhhhhhhHHHHHHhhccceEEeecccCCCcceee-eccc
Q psy11265 127 LDKYSTALGYLEQLMLNSMFSIHINRAAVDTLKTLV-TKLS 166 (945)
Q Consensus 127 ~e~k~acyg~t~alL~~a~~~i~v~~~~~~~~~~LV-asdi 166 (945)
+.+-.+|.++..| |..|..+|+ ++ .-..+|| ++|.
T Consensus 169 ~~i~~aCaS~~~A-l~~A~~~I~--~G--~~d~vlvgG~d~ 204 (425)
T PRK06501 169 ISLSTACASGATA-IQLGVEAIR--RG--ETDRALCIATDG 204 (425)
T ss_pred eeecCccHHHHHH-HHHHHHHHH--cC--CCCEEEEeeecc
Confidence 5566789999999 999999997 33 3567888 8773
No 210
>KOG3852|consensus
Probab=20.15 E-value=33 Score=38.55 Aligned_cols=26 Identities=27% Similarity=0.712 Sum_probs=21.4
Q ss_pred ccChhhHHHHhhcCcceEEEEecCCChhhHhhhc
Q psy11265 868 HTGYEDLNELLKKSQDLTFTIEKPNDEDWKKLND 901 (945)
Q Consensus 868 ~~gy~dl~~l~~~~~~l~f~~ekp~~~~w~~l~~ 901 (945)
++||.||| |+|-++-|++.|+.-.-.
T Consensus 117 gl~ykDLD--------lIF~v~l~~e~eFq~vkd 142 (426)
T KOG3852|consen 117 GLSYKDLD--------LIFPVDLPGEAEFQLVKD 142 (426)
T ss_pred CcCccccc--------eEEeecCCCchhhHHHHH
Confidence 39999996 999999999999765433
Done!