Query psy11267
Match_columns 103
No_of_seqs 128 out of 1033
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 22:30:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11267.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11267hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3neh_A Renal dipeptidase famil 100.0 1.4E-44 4.9E-49 282.5 8.9 100 1-101 103-218 (318)
2 3id7_A Dipeptidase; streptomyc 100.0 1.2E-44 4.1E-49 290.0 8.7 101 1-101 119-236 (400)
3 3ly0_A Dipeptidase AC. metallo 100.0 9.7E-44 3.3E-48 282.1 8.7 101 1-101 135-257 (364)
4 3b40_A PVDM, probable dipeptid 100.0 1.9E-43 6.5E-48 284.1 9.8 101 1-101 134-258 (417)
5 2rag_A Dipeptidase; aminohydro 100.0 8.6E-44 2.9E-48 286.1 7.7 101 1-101 155-274 (417)
6 1itu_A Renal dipeptidase; glyc 100.0 3.5E-43 1.2E-47 279.1 9.5 101 1-101 121-243 (369)
7 2i5g_A Amidohydrolase; NYSGXRC 100.0 8E-42 2.8E-46 267.0 8.8 101 1-101 89-204 (325)
8 2ffi_A 2-pyrone-4,6-dicarboxyl 96.2 0.034 1.2E-06 40.2 9.1 84 14-98 95-188 (288)
9 4i6k_A Amidohydrolase family p 92.2 0.45 1.5E-05 34.9 6.7 67 13-80 107-183 (294)
10 3ngf_A AP endonuclease, family 85.1 6.9 0.00024 27.6 8.6 65 15-79 27-115 (269)
11 2vc7_A Aryldialkylphosphatase; 84.8 1.4 4.7E-05 32.0 4.8 51 41-100 156-214 (314)
12 1zco_A 2-dehydro-3-deoxyphosph 80.2 4.1 0.00014 30.2 5.9 89 14-102 147-255 (262)
13 4d9a_A 2-pyrone-4,6-dicarbaxyl 78.0 1.5 5E-05 32.6 2.9 67 13-81 108-184 (303)
14 3irs_A Uncharacterized protein 74.7 11 0.00039 27.3 7.0 65 14-79 108-192 (291)
15 3tva_A Xylose isomerase domain 72.7 18 0.00062 25.5 7.5 81 15-101 25-140 (290)
16 3l23_A Sugar phosphate isomera 72.5 25 0.00084 25.4 8.7 82 14-102 32-146 (303)
17 4do7_A Amidohydrolase 2; enzym 69.9 5.9 0.0002 28.9 4.4 70 13-83 90-172 (303)
18 3tn4_A Phosphotriesterase; lac 69.4 36 0.0012 26.1 9.3 68 13-80 219-302 (360)
19 3erp_A Putative oxidoreductase 68.5 7.1 0.00024 29.5 4.7 74 10-83 167-249 (353)
20 3cjp_A Predicted amidohydrolas 67.4 20 0.00067 25.2 6.7 67 14-81 104-183 (272)
21 3n6q_A YGHZ aldo-keto reductas 67.0 17 0.00057 27.2 6.5 73 10-82 146-228 (346)
22 1ayg_A Cytochrome C-552; elect 65.8 2.8 9.7E-05 24.3 1.6 14 89-102 63-76 (80)
23 2d0s_A Cytochrome C, cytochrom 64.3 3.2 0.00011 24.0 1.7 16 88-103 61-76 (79)
24 1k77_A EC1530, hypothetical pr 64.3 32 0.0011 23.6 8.9 66 15-80 19-108 (260)
25 1kx2_A Mono-heme C-type cytoch 63.9 3.1 0.00011 24.5 1.6 15 88-102 63-77 (81)
26 2gzx_A Putative TATD related D 63.0 30 0.001 23.9 6.9 64 14-79 75-155 (265)
27 2c4w_A 3-dehydroquinate dehydr 62.7 13 0.00043 26.6 4.8 65 15-80 41-115 (176)
28 1gks_A Cytochrome C551; haloph 62.4 3.1 0.00011 24.3 1.3 17 86-102 58-74 (78)
29 1c53_A Cytochrome C553; electr 62.3 3.2 0.00011 24.1 1.4 16 87-102 61-76 (79)
30 2kvc_A Putative uncharacterize 60.8 3.1 0.00011 27.4 1.2 15 88-102 37-51 (103)
31 3cu4_A Cytochrome C family pro 60.7 3.8 0.00013 23.9 1.5 18 85-102 62-80 (85)
32 3dmi_A Cytochrome C6; electron 60.3 5.1 0.00017 23.2 2.1 16 87-102 64-79 (88)
33 4e38_A Keto-hydroxyglutarate-a 59.9 33 0.0011 25.0 6.8 23 14-36 49-71 (232)
34 1c75_A Cytochrome C-553; heme, 59.8 4.1 0.00014 23.1 1.5 15 88-102 53-67 (71)
35 2hbv_A 2-amino-3-carboxymucona 59.7 5.3 0.00018 29.3 2.5 44 14-58 130-179 (334)
36 2gwg_A 4-oxalomesaconate hydra 59.6 23 0.00078 26.1 6.0 67 12-79 123-225 (350)
37 2lky_A Uncharacterized protein 59.4 3.5 0.00012 27.5 1.3 15 88-102 39-53 (112)
38 2wm1_A 2-amino-3-carboxymucona 59.4 9.7 0.00033 27.8 3.9 44 14-58 126-176 (336)
39 2m0n_A Putative uncharacterize 59.4 4.8 0.00016 26.8 1.9 17 87-103 38-54 (112)
40 2zxy_A Cytochrome C552, cytoch 59.4 3.7 0.00013 23.7 1.3 16 87-102 68-83 (87)
41 1a56_A C-551, ferricytochrome 59.4 3.4 0.00012 24.0 1.1 15 88-102 63-77 (81)
42 2exv_A Cytochrome C-551; alpha 58.7 4.6 0.00016 23.3 1.6 14 89-102 65-78 (82)
43 3sz8_A 2-dehydro-3-deoxyphosph 58.7 23 0.0008 26.7 5.9 93 9-102 146-269 (285)
44 1cc5_A Cytochrome C5; electron 58.4 4.5 0.00015 24.1 1.6 14 89-102 67-80 (83)
45 3ph2_B Cytochrome C6; photosyn 58.1 4.5 0.00015 23.3 1.5 15 88-102 64-78 (86)
46 1cno_A Cytochrome C552; electr 57.6 5 0.00017 23.6 1.7 15 88-102 65-79 (87)
47 1cch_A Cytochrome C551; electr 57.2 4.9 0.00017 23.1 1.6 14 89-102 65-78 (82)
48 1eye_A DHPS 1, dihydropteroate 56.7 14 0.00048 27.7 4.4 39 40-78 91-132 (280)
49 1ls9_A Cytochrome C6; omega lo 56.6 6.4 0.00022 23.1 2.1 17 86-102 66-82 (91)
50 1wve_C 4-cresol dehydrogenase 56.5 5.7 0.00019 23.2 1.8 15 88-102 56-70 (80)
51 3kc2_A Uncharacterized protein 56.1 17 0.00057 27.8 4.8 52 5-56 26-78 (352)
52 1vs1_A 3-deoxy-7-phosphoheptul 56.0 9.5 0.00032 28.5 3.3 87 15-102 163-270 (276)
53 3iv8_A N-acetylglucosamine-6-p 56.0 21 0.00072 27.6 5.4 65 11-78 150-217 (381)
54 3dr0_A Cytochrome C6; photosyn 55.5 4.8 0.00016 23.4 1.3 15 88-102 70-84 (93)
55 3kws_A Putative sugar isomeras 55.3 51 0.0017 23.1 9.3 67 15-81 42-128 (287)
56 1mz4_A Cytochrome C550; PSII a 54.8 5.7 0.00019 25.6 1.7 15 88-102 105-119 (137)
57 3gnh_A L-lysine, L-arginine ca 54.7 58 0.002 23.6 7.9 77 14-101 170-261 (403)
58 1mzr_A 2,5-diketo-D-gluconate 54.6 42 0.0015 24.7 6.8 86 10-101 137-229 (296)
59 1f1f_A Cytochrome C6; heme, pr 54.2 7.4 0.00025 22.5 2.1 16 87-102 66-81 (89)
60 1gdv_A Cytochrome C6; RED ALGA 54.0 5.8 0.0002 22.7 1.5 16 87-102 62-77 (85)
61 1cyi_A Cytochrome C6, cytochro 54.0 7.5 0.00026 22.7 2.1 16 87-102 64-79 (90)
62 2vp8_A Dihydropteroate synthas 53.7 4.8 0.00016 31.0 1.4 39 40-78 128-168 (318)
63 3dp5_A OMCF, cytochrome C fami 52.4 6.2 0.00021 24.2 1.5 14 89-102 81-94 (99)
64 3ol3_A Putative uncharacterize 52.2 7.2 0.00025 25.7 1.9 16 87-102 41-56 (107)
65 2ce0_A Cytochrome C6; chloropl 52.0 8.7 0.0003 23.0 2.2 19 84-102 73-91 (105)
66 1i60_A IOLI protein; beta barr 52.0 54 0.0019 22.4 9.2 67 14-80 17-107 (278)
67 1c6r_A Cytochrome C6; electron 51.7 6.6 0.00023 22.8 1.5 16 87-102 65-80 (89)
68 2r8c_A Putative amidohydrolase 51.5 58 0.002 24.1 7.1 76 15-101 179-269 (426)
69 3cny_A Inositol catabolism pro 51.4 59 0.002 22.7 8.6 64 15-79 35-112 (301)
70 1e29_A Cytochrome C549; electr 50.8 7.1 0.00024 25.5 1.7 15 88-102 105-119 (135)
71 2zon_G Cytochrome C551; nitrit 50.4 7.4 0.00025 22.7 1.6 14 89-102 69-82 (87)
72 1w5c_T Cytochrome C-550; photo 49.8 7.5 0.00025 25.9 1.7 15 88-102 131-145 (163)
73 3tr9_A Dihydropteroate synthas 49.6 17 0.00058 27.9 3.9 40 40-79 116-157 (314)
74 2dqw_A Dihydropteroate synthas 49.5 21 0.00073 26.9 4.4 40 40-79 114-155 (294)
75 2y5s_A DHPS, dihydropteroate s 48.9 12 0.0004 28.4 2.8 39 40-78 108-148 (294)
76 1zjj_A Hypothetical protein PH 48.0 31 0.001 24.0 4.8 47 6-52 15-61 (263)
77 2zzs_A Cytochrome C554; C-type 47.7 8.9 0.0003 23.1 1.7 15 88-102 85-99 (103)
78 2vun_A Enamidase; nicotinate d 47.1 62 0.0021 23.4 6.6 80 13-100 147-238 (386)
79 1w2l_A Cytochrome oxidase subu 46.7 8.4 0.00029 22.8 1.5 16 87-102 80-95 (99)
80 3qxb_A Putative xylose isomera 46.2 48 0.0016 23.7 5.8 65 16-80 40-137 (316)
81 1f1c_A Cytochrome C549; dimeri 45.5 9.6 0.00033 23.8 1.7 15 88-102 103-117 (129)
82 2l4d_A SCO1/SENC family protei 43.4 10 0.00034 22.9 1.5 14 89-102 80-93 (110)
83 1hw6_A 2,5-diketo-D-gluconic a 42.7 86 0.0029 22.6 6.7 86 10-101 117-209 (278)
84 1h05_A 3-dehydroquinate dehydr 42.1 76 0.0026 21.8 5.9 56 21-80 41-105 (146)
85 4gie_A Prostaglandin F synthas 42.0 14 0.00046 27.2 2.2 25 9-33 125-150 (290)
86 3lmz_A Putative sugar isomeras 41.6 84 0.0029 21.6 7.0 66 14-79 33-111 (257)
87 3cp5_A Cytochrome C; electron 41.5 12 0.0004 23.2 1.6 15 88-102 103-117 (124)
88 2yw3_A 4-hydroxy-2-oxoglutarat 40.9 89 0.003 21.7 6.7 37 10-47 24-60 (207)
89 4f40_A Prostaglandin F2-alpha 40.2 26 0.00088 25.6 3.5 22 12-33 133-155 (288)
90 3b3d_A YTBE protein, putative 39.9 24 0.00081 26.2 3.3 40 13-52 160-224 (314)
91 3p6l_A Sugar phosphate isomera 39.8 73 0.0025 21.9 5.7 66 15-80 26-114 (262)
92 1ji1_A Alpha-amylase I; beta/a 39.7 22 0.00077 28.8 3.4 47 14-60 194-271 (637)
93 2dvt_A Thermophilic reversible 39.6 29 0.00099 24.8 3.7 44 14-58 110-166 (327)
94 4aef_A Neopullulanase (alpha-a 39.6 21 0.0007 29.1 3.1 55 14-68 242-324 (645)
95 4hb7_A Dihydropteroate synthas 39.4 1.2E+02 0.004 22.7 7.2 58 40-100 92-152 (270)
96 1h1o_A Cytochrome C-552; elect 39.4 13 0.00046 24.5 1.7 15 88-102 166-180 (183)
97 1yrr_A N-acetylglucosamine-6-p 39.0 81 0.0028 22.9 6.1 59 40-100 179-262 (382)
98 4gac_A Alcohol dehydrogenase [ 39.0 14 0.00047 27.2 1.8 24 11-34 140-164 (324)
99 2wc7_A Alpha amylase, catalyti 39.0 23 0.00079 27.5 3.2 54 14-67 59-140 (488)
100 3qc0_A Sugar isomerase; TIM ba 38.9 42 0.0014 23.1 4.3 67 14-80 21-106 (275)
101 2vhl_A N-acetylglucosamine-6-p 38.8 1.1E+02 0.0038 22.3 8.9 84 13-100 157-269 (396)
102 4gm6_A PFKB family carbohydrat 38.5 35 0.0012 24.9 4.0 46 10-57 55-102 (351)
103 2zvr_A Uncharacterized protein 38.3 1E+02 0.0034 21.6 8.2 43 15-57 45-89 (290)
104 4hlc_A DTMP kinase, thymidylat 38.1 29 0.00098 24.1 3.3 49 1-49 4-54 (205)
105 3aal_A Probable endonuclease 4 38.1 1E+02 0.0036 21.7 8.3 68 14-81 21-118 (303)
106 2f6k_A Metal-dependent hydrola 37.5 34 0.0012 24.2 3.7 44 14-58 106-156 (307)
107 2z1k_A (NEO)pullulanase; hydro 37.5 25 0.00085 27.1 3.2 54 14-67 53-134 (475)
108 1c52_A Cytochrome-C552; electr 37.4 14 0.00049 23.5 1.5 14 89-102 74-87 (131)
109 3qy7_A Tyrosine-protein phosph 37.2 13 0.00044 27.2 1.4 29 6-34 15-43 (262)
110 1h32_B Cytochrome C, SOXX; ele 37.1 16 0.00055 23.3 1.8 16 88-103 119-134 (138)
111 3ln3_A Dihydrodiol dehydrogena 36.6 93 0.0032 22.7 6.1 89 10-102 145-249 (324)
112 1o60_A 2-dehydro-3-deoxyphosph 36.2 70 0.0024 23.9 5.4 92 10-102 145-267 (292)
113 3krb_A Aldose reductase; ssgci 36.2 16 0.00056 27.3 1.9 88 10-101 154-257 (334)
114 3up8_A Putative 2,5-diketo-D-g 35.7 30 0.001 25.6 3.3 25 10-34 136-161 (298)
115 2bgs_A Aldose reductase; holoe 35.7 91 0.0031 23.4 6.0 86 10-102 168-261 (344)
116 1vr6_A Phospho-2-dehydro-3-deo 35.6 27 0.00091 27.1 3.1 88 14-102 230-338 (350)
117 1m70_A Cytochrome C4; electron 35.5 17 0.00058 24.1 1.7 15 88-102 172-186 (190)
118 3ajx_A 3-hexulose-6-phosphate 35.5 39 0.0013 22.8 3.6 69 11-80 13-87 (207)
119 2c1d_B SOXX; sulfur oxidation, 35.3 18 0.00062 23.1 1.8 15 88-102 118-132 (137)
120 3h7u_A Aldo-keto reductase; st 35.3 16 0.00054 27.4 1.7 88 10-101 156-253 (335)
121 1mi3_A Xylose reductase, XR; a 35.1 19 0.00067 26.6 2.1 24 10-33 147-171 (322)
122 1zgd_A Chalcone reductase; pol 34.9 33 0.0011 25.2 3.4 24 10-33 144-168 (312)
123 3f7j_A YVGN protein; aldo-keto 34.9 32 0.0011 24.9 3.3 23 11-33 120-143 (276)
124 2wzm_A Aldo-keto reductase; ox 34.9 35 0.0012 24.9 3.5 22 12-33 127-149 (283)
125 1gqo_A Dehydroquinase; dehydra 34.4 84 0.0029 21.5 5.1 56 21-80 39-103 (143)
126 3o0k_A Aldo/keto reductase; ss 34.3 36 0.0012 24.9 3.5 83 11-101 141-230 (283)
127 3b3e_A YVGN protein; aldo-keto 34.2 33 0.0011 25.5 3.3 23 11-33 154-177 (310)
128 1ccr_A Cytochrome C; electron 34.2 17 0.00058 22.2 1.5 16 87-102 92-107 (112)
129 1vbj_A Prostaglandin F synthas 33.9 35 0.0012 24.8 3.4 23 11-33 123-146 (281)
130 1qwk_A Aldose reductase, aldo- 33.7 33 0.0011 25.2 3.2 88 10-101 131-240 (317)
131 3h7r_A Aldo-keto reductase; st 33.3 31 0.0011 25.8 3.1 25 10-34 152-177 (331)
132 3o0r_C Nitric oxide reductase 33.1 18 0.0006 23.2 1.5 13 90-102 117-129 (146)
133 1qn2_A Cytochrome CH; electron 32.9 26 0.0009 20.9 2.2 16 87-102 81-96 (100)
134 2qgv_A Hydrogenase-1 operon pr 32.9 61 0.0021 21.7 4.2 33 38-75 7-39 (140)
135 1vp5_A 2,5-diketo-D-gluconic a 32.8 39 0.0013 24.9 3.5 23 11-33 131-154 (298)
136 1aj0_A DHPS, dihydropteroate s 32.6 68 0.0023 23.9 4.8 39 40-78 101-141 (282)
137 1vlv_A Otcase, ornithine carba 32.5 1.4E+02 0.0048 22.7 6.7 57 18-75 78-140 (325)
138 3edn_A Phenazine biosynthesis 32.4 17 0.00057 26.6 1.4 25 78-102 19-43 (299)
139 1j0h_A Neopullulanase; beta-al 32.3 37 0.0013 27.2 3.5 54 14-67 179-260 (588)
140 2nwr_A 2-dehydro-3-deoxyphosph 32.2 26 0.0009 26.0 2.4 92 10-102 131-250 (267)
141 1lwj_A 4-alpha-glucanotransfer 32.2 29 0.001 26.5 2.8 53 14-66 26-106 (441)
142 2blf_B SORB, sulfite\:cytochro 32.1 20 0.00068 21.4 1.5 14 89-102 64-77 (81)
143 1ea9_C Cyclomaltodextrinase; h 31.8 41 0.0014 27.0 3.7 54 14-67 175-256 (583)
144 3hjn_A DTMP kinase, thymidylat 31.6 46 0.0016 22.8 3.5 47 1-47 2-51 (197)
145 3obe_A Sugar phosphate isomera 31.5 1.4E+02 0.0049 21.3 10.4 81 15-102 40-152 (305)
146 3tjl_A NADPH dehydrogenase; OL 31.5 41 0.0014 26.5 3.6 62 40-101 96-168 (407)
147 3vrd_A FCCA subunit, flavocyto 31.5 21 0.00071 24.0 1.7 16 87-102 58-73 (174)
148 2dep_A Xylanase B, thermostabl 31.4 99 0.0034 23.4 5.7 61 40-100 205-282 (356)
149 1gcy_A Glucan 1,4-alpha-maltot 31.2 73 0.0025 25.1 5.0 47 15-61 41-122 (527)
150 2w9k_A Cytochrome C, cytochrom 31.1 21 0.0007 22.0 1.5 17 86-102 93-109 (114)
151 3ktc_A Xylose isomerase; putat 31.0 1.5E+02 0.0051 21.4 8.7 67 14-80 36-130 (333)
152 1co6_A Protein (cytochrome C2) 30.5 21 0.00073 21.6 1.5 14 89-102 84-97 (107)
153 2bhu_A Maltooligosyltrehalose 30.5 49 0.0017 26.8 4.0 46 14-59 147-220 (602)
154 2dh2_A 4F2 cell-surface antige 30.1 21 0.00072 27.5 1.6 45 14-58 39-108 (424)
155 2oyc_A PLP phosphatase, pyrido 30.1 97 0.0033 21.9 5.2 46 6-51 35-80 (306)
156 3mcm_A 2-amino-4-hydroxy-6-hyd 29.9 81 0.0028 25.2 5.1 40 40-79 280-324 (442)
157 1tx2_A DHPS, dihydropteroate s 29.6 67 0.0023 24.2 4.3 39 40-78 126-167 (297)
158 2h9a_B CO dehydrogenase/acetyl 29.5 1.2E+02 0.0041 22.9 5.7 39 40-78 138-181 (310)
159 1wzl_A Alpha-amylase II; pullu 29.4 43 0.0015 26.9 3.4 54 14-67 176-257 (585)
160 1pg5_A Aspartate carbamoyltran 29.4 76 0.0026 23.8 4.6 54 18-74 58-120 (299)
161 3n2t_A Putative oxidoreductase 29.4 20 0.0007 26.8 1.4 24 10-33 154-178 (348)
162 4f0r_A 5-methylthioadenosine/S 29.2 79 0.0027 23.4 4.7 14 88-101 258-271 (447)
163 1ycc_A Cytochrome C; electron 29.0 24 0.00081 21.3 1.5 14 89-102 89-103 (108)
164 3epr_A Hydrolase, haloacid deh 28.8 57 0.002 22.5 3.7 46 8-53 21-66 (264)
165 1pyf_A IOLS protein; beta-alph 28.8 20 0.0007 26.2 1.3 25 9-33 132-157 (312)
166 2gc4_D Cytochrome C-L; electro 28.7 30 0.001 22.4 2.1 17 86-102 104-120 (147)
167 2hx1_A Predicted sugar phospha 28.6 1.1E+02 0.0038 21.2 5.2 46 6-51 28-73 (284)
168 3feq_A Putative amidohydrolase 28.6 74 0.0025 23.2 4.4 76 15-101 176-266 (423)
169 3vgf_A Malto-oligosyltrehalose 28.5 56 0.0019 26.1 4.0 46 14-59 122-195 (558)
170 1dxh_A Ornithine carbamoyltran 28.5 1.7E+02 0.0058 22.3 6.5 54 18-75 65-127 (335)
171 1uqr_A 3-dehydroquinate dehydr 28.5 70 0.0024 22.2 3.9 56 21-80 40-104 (154)
172 2uwf_A Endoxylanase, alkaline 28.5 1E+02 0.0034 23.4 5.2 44 40-83 206-261 (356)
173 3v0s_A Perakine reductase; AKR 28.3 38 0.0013 25.1 2.8 24 10-33 134-158 (337)
174 2qgq_A Protein TM_1862; alpha- 28.2 1.7E+02 0.0058 21.1 7.1 84 14-100 39-146 (304)
175 2xsa_A Ogoga, hyaluronoglucosa 28.1 35 0.0012 27.5 2.6 20 14-33 96-115 (447)
176 3fs2_A 2-dehydro-3-deoxyphosph 27.9 29 0.00098 26.4 2.0 93 9-102 167-288 (298)
177 3buv_A 3-OXO-5-beta-steroid 4- 27.8 74 0.0025 23.4 4.3 88 11-102 148-251 (326)
178 3a9f_A Cytochrome C; alpha hel 27.8 33 0.0011 21.4 2.0 17 86-102 72-88 (92)
179 4ekn_B Aspartate carbamoyltran 27.7 1.1E+02 0.0039 23.0 5.3 57 18-74 60-122 (306)
180 1s7j_A Phenazine biosynthesis 27.7 19 0.00064 25.9 0.9 25 78-102 18-42 (262)
181 3o3r_A Aldo-keto reductase fam 27.6 36 0.0012 25.0 2.5 86 12-101 140-240 (316)
182 2hwj_A AGR_C_2837P, hypothetic 27.6 1.1E+02 0.0038 21.9 5.0 49 50-99 87-140 (205)
183 1duv_G Octase-1, ornithine tra 27.4 1.5E+02 0.0052 22.6 6.1 56 18-74 64-125 (333)
184 1wza_A Alpha-amylase A; hydrol 27.3 42 0.0014 26.0 2.9 53 14-66 30-118 (488)
185 2w37_A Ornithine carbamoyltran 27.2 1.9E+02 0.0066 22.3 6.7 56 18-74 87-148 (359)
186 3tml_A 2-dehydro-3-deoxyphosph 27.1 21 0.00072 27.0 1.1 88 14-102 148-270 (288)
187 1y9z_A Alkaline serine proteas 27.1 1.1E+02 0.0039 23.4 5.4 44 14-57 111-158 (441)
188 4dun_A Putative phenazine bios 27.1 16 0.00054 26.9 0.4 26 77-102 18-43 (263)
189 1ml4_A Aspartate transcarbamoy 27.0 81 0.0028 23.8 4.4 58 17-74 63-126 (308)
190 1pz1_A GSP69, general stress p 26.9 25 0.00087 26.1 1.6 25 9-33 132-157 (333)
191 3gip_A N-acyl-D-glutamate deac 26.9 2.1E+02 0.0072 21.8 8.1 84 13-99 165-268 (480)
192 1gve_A Aflatoxin B1 aldehyde r 26.9 54 0.0018 24.1 3.4 74 10-83 117-200 (327)
193 1s1p_A Aldo-keto reductase fam 26.8 1.9E+02 0.0065 21.2 7.1 88 11-102 145-248 (331)
194 4h41_A Putative alpha-L-fucosi 26.6 56 0.0019 25.1 3.5 38 16-53 59-117 (340)
195 4dzh_A Amidohydrolase; adenosi 26.5 2.1E+02 0.007 21.5 7.8 52 40-101 213-280 (472)
196 2q02_A Putative cytoplasmic pr 26.1 1.6E+02 0.0054 20.0 7.2 68 14-81 22-109 (272)
197 2xts_B Cytochrome; oxidoreduct 26.1 36 0.0012 23.8 2.2 17 86-102 101-117 (205)
198 1hro_A Cytochrome C2; electron 26.0 31 0.001 20.8 1.6 15 89-103 89-103 (106)
199 1i54_A Cytochrome C; zinc-porp 25.9 38 0.0013 20.0 2.0 15 88-102 83-98 (103)
200 4aie_A Glucan 1,6-alpha-glucos 25.8 41 0.0014 25.9 2.6 49 14-62 35-110 (549)
201 1gci_A Subtilisin; hydrolase, 25.8 89 0.003 22.4 4.3 42 14-55 106-150 (269)
202 2x7v_A Probable endonuclease 4 25.8 1.6E+02 0.0056 20.1 7.9 68 14-81 15-113 (287)
203 1thm_A Thermitase; hydrolase(s 25.7 87 0.003 22.5 4.3 42 14-55 116-160 (279)
204 1oth_A Protein (ornithine tran 25.7 1.9E+02 0.0066 21.8 6.4 56 18-74 66-127 (321)
205 1dbi_A AK.1 serine protease; h 25.6 1E+02 0.0034 22.2 4.6 45 14-58 117-164 (280)
206 1muw_A Xylose isomerase; atomi 25.5 2.1E+02 0.0072 21.3 7.0 67 14-80 36-139 (386)
207 1pvv_A Otcase, ornithine carba 25.4 1.4E+02 0.0048 22.5 5.5 58 18-75 66-128 (315)
208 1g94_A Alpha-amylase; beta-alp 25.2 70 0.0024 24.5 3.8 46 15-60 18-93 (448)
209 1xub_A Phenazine biosynthesis 25.1 17 0.00058 26.7 0.3 25 78-102 37-61 (298)
210 3lqv_P Splicing factor 3B subu 24.8 41 0.0014 18.3 1.7 15 85-99 18-32 (39)
211 3n8k_A 3-dehydroquinate dehydr 24.7 1E+02 0.0035 21.8 4.3 53 21-77 67-127 (172)
212 2yci_X 5-methyltetrahydrofolat 24.6 71 0.0024 23.5 3.6 35 47-81 100-136 (271)
213 4exb_A Putative uncharacterize 24.5 1.1E+02 0.0037 22.3 4.6 22 12-33 170-192 (292)
214 1r0r_E Subtilisin carlsberg; h 24.2 1.1E+02 0.0037 21.9 4.5 42 14-55 107-151 (274)
215 4dyk_A Amidohydrolase; adenosi 24.2 1.3E+02 0.0045 22.2 5.1 52 40-101 206-273 (451)
216 1to2_E Subtilisin BPN'; serine 24.1 1.1E+02 0.0038 22.0 4.6 42 14-55 108-152 (281)
217 1qya_A ORFB, hypothetical prot 24.1 24 0.00083 25.8 1.0 25 78-102 28-52 (307)
218 1zco_A 2-dehydro-3-deoxyphosph 24.0 83 0.0028 23.0 3.9 62 40-101 121-190 (262)
219 1lqa_A TAS protein; TIM barrel 23.7 81 0.0028 23.1 3.8 74 9-82 156-239 (346)
220 1v0l_A Endo-1,4-beta-xylanase 23.6 82 0.0028 23.4 3.9 15 40-54 187-201 (313)
221 2bp1_A Aflatoxin B1 aldehyde r 23.6 66 0.0022 24.1 3.4 74 10-83 150-233 (360)
222 3edf_A FSPCMD, cyclomaltodextr 23.6 66 0.0023 25.8 3.6 48 14-61 151-228 (601)
223 3gr7_A NADPH dehydrogenase; fl 23.6 75 0.0026 23.9 3.7 57 40-101 87-145 (340)
224 1u0k_A Gene product PA4716; sc 23.6 30 0.001 25.1 1.4 25 78-102 20-44 (288)
225 1ynp_A Oxidoreductase, AKR11C1 23.5 45 0.0016 24.6 2.4 23 10-32 147-170 (317)
226 3dhu_A Alpha-amylase; structur 23.5 66 0.0023 24.5 3.4 49 14-62 33-114 (449)
227 1i1w_A Endo-1,4-beta-xylanase; 23.3 62 0.0021 23.8 3.1 41 40-80 189-240 (303)
228 2zxd_A Alpha-L-fucosidase, put 23.3 87 0.003 24.8 4.1 42 16-57 110-173 (455)
229 2gjh_A Designed protein; oblig 23.2 46 0.0016 19.3 1.8 21 16-36 23-43 (62)
230 1eg5_A Aminotransferase; PLP-d 23.1 70 0.0024 22.7 3.3 44 13-57 128-181 (384)
231 2d0w_A Cytochrome CL; electron 23.0 44 0.0015 22.4 2.1 17 86-102 106-122 (170)
232 1mxs_A KDPG aldolase; 2-keto-3 23.0 1.2E+02 0.0041 21.5 4.5 34 12-47 39-73 (225)
233 1y1u_A Signal transducer and a 23.0 37 0.0013 28.2 1.9 19 84-102 392-410 (585)
234 2qkf_A 3-deoxy-D-manno-octulos 22.9 52 0.0018 24.4 2.6 92 10-102 142-264 (280)
235 3m07_A Putative alpha amylase; 22.8 67 0.0023 26.3 3.5 45 15-59 158-230 (618)
236 2c8s_A Cytochrome C-L; HAEM, h 22.7 36 0.0012 23.0 1.6 17 86-102 112-128 (172)
237 3sho_A Transcriptional regulat 22.7 75 0.0026 20.8 3.2 26 14-39 104-129 (187)
238 1w32_A Endo-1,4-beta-xylanase 22.7 68 0.0023 24.3 3.3 44 40-83 196-253 (348)
239 1ta3_B Endo-1,4-beta-xylanase; 22.7 75 0.0026 23.5 3.5 11 40-50 221-231 (303)
240 3kru_A NADH:flavin oxidoreduct 22.2 44 0.0015 25.4 2.1 58 40-101 85-144 (343)
241 1m3s_A Hypothetical protein YC 22.1 77 0.0026 20.8 3.2 26 14-39 96-121 (186)
242 3i1j_A Oxidoreductase, short c 21.9 1.9E+02 0.0064 19.4 7.3 84 14-98 28-122 (247)
243 1n82_A Xylanase, intra-cellula 21.9 81 0.0028 23.5 3.5 44 40-83 192-247 (331)
244 4ep1_A Otcase, ornithine carba 21.8 2.7E+02 0.0092 21.3 6.5 53 19-75 91-152 (340)
245 1afs_A 3-alpha-HSD, 3-alpha-hy 21.7 2.4E+02 0.0081 20.6 7.0 89 10-102 144-248 (323)
246 3kip_A 3-dehydroquinase, type 21.6 1.2E+02 0.0042 21.3 4.2 49 28-77 59-116 (167)
247 2xbl_A Phosphoheptose isomeras 21.6 99 0.0034 20.3 3.7 26 14-39 133-158 (198)
248 1vhc_A Putative KHG/KDPG aldol 21.6 1.3E+02 0.0043 21.4 4.4 36 11-47 29-64 (224)
249 2guk_A Hypothetical protein PG 21.5 43 0.0015 22.4 1.7 37 21-57 23-59 (120)
250 3pdw_A Uncharacterized hydrola 21.4 1.9E+02 0.0065 19.6 5.2 41 13-53 27-67 (266)
251 3kzh_A Probable sugar kinase; 21.4 1.1E+02 0.0037 22.0 4.1 41 15-57 47-88 (328)
252 3tpf_A Otcase, ornithine carba 21.2 2.7E+02 0.0091 20.9 6.6 52 19-74 57-117 (307)
253 3grf_A Ornithine carbamoyltran 21.0 1.8E+02 0.0063 22.0 5.4 56 18-75 64-127 (328)
254 1gtz_A 3-dehydroquinate dehydr 21.0 90 0.0031 21.7 3.3 56 21-80 45-110 (156)
255 2xhz_A KDSD, YRBH, arabinose 5 21.0 77 0.0027 20.7 3.0 26 14-39 113-138 (183)
256 2wvv_A Alpha-L-fucosidase; alp 20.9 87 0.003 24.7 3.7 42 15-56 82-145 (450)
257 1nsj_A PRAI, phosphoribosyl an 20.8 48 0.0016 23.4 2.0 18 85-102 33-50 (205)
258 1m7x_A 1,4-alpha-glucan branch 20.7 1.2E+02 0.0039 24.6 4.4 44 15-58 159-231 (617)
259 3k8k_A Alpha-amylase, SUSG; al 20.7 50 0.0017 27.4 2.3 54 14-67 63-144 (669)
260 3ib6_A Uncharacterized protein 20.7 1.8E+02 0.0062 18.8 5.8 44 7-50 33-76 (189)
261 1v5x_A PRA isomerase, phosphor 20.6 49 0.0017 23.3 2.0 18 85-102 32-49 (203)
262 2paj_A Putative cytosine/guani 20.6 2E+02 0.0067 21.6 5.5 19 40-59 233-251 (492)
263 2z00_A Dihydroorotase; zinc bi 20.5 2.2E+02 0.0074 20.7 5.6 47 14-61 130-179 (426)
264 1wbh_A KHG/KDPG aldolase; lyas 20.5 1.3E+02 0.0045 21.1 4.2 35 11-46 28-62 (214)
265 3dx5_A Uncharacterized protein 20.4 1.8E+02 0.0062 20.0 5.0 82 15-100 19-123 (286)
266 2ef0_A Ornithine carbamoyltran 20.4 2.7E+02 0.0094 20.8 6.9 57 18-74 65-126 (301)
267 4f2g_A Otcase 1, ornithine car 20.3 2.6E+02 0.0089 21.0 6.1 52 19-74 66-126 (309)
268 2wje_A CPS4B, tyrosine-protein 20.1 36 0.0012 24.0 1.2 28 6-33 19-46 (247)
269 1us0_A Aldose reductase; oxido 20.1 2.5E+02 0.0087 20.3 7.9 89 10-102 138-241 (316)
270 1xla_A D-xylose isomerase; iso 20.1 2.8E+02 0.0095 20.7 6.6 68 14-81 36-140 (394)
271 3sds_A Ornithine carbamoyltran 20.1 2.9E+02 0.0098 21.2 6.4 56 19-74 87-147 (353)
No 1
>3neh_A Renal dipeptidase family protein; structural genomics, nysgrc, dipeptide L-Leu-D-Ala, PSI-2, P structure initiative; HET: L3A; 1.64A {Listeria monocytogenes} PDB: 3lu2_A
Probab=100.00 E-value=1.4e-44 Score=282.51 Aligned_cols=100 Identities=28% Similarity=0.357 Sum_probs=97.4
Q ss_pred CcccccccccCCcHHHHHHHHHcCccEEeeccCCCCchH----------------HHHHHHHhcCCeeeccCCCHHHHHH
Q psy11267 1 MIGVEGGHSLGNSMAVLRMFYKLGVRYLTLTHACPTPWY----------------LVVRECNRLGMLIDLSHTSVQTMRH 64 (103)
Q Consensus 1 ~l~~Eg~~~l~~~l~~l~~~y~lGvR~i~lt~n~~n~~~----------------~~i~~mn~lGmiiDlSH~s~~t~~d 64 (103)
+|++||+++|++|++.|+.||++|||+||||||++|.|| ++|+|||++||+||+||+|++||||
T Consensus 103 ~l~iEg~~~i~~~l~~L~~~y~lGvR~~~Lt~n~~N~~a~g~~~~~~~GLT~~G~~vV~eMnrlGmivDlSH~s~~t~~d 182 (318)
T 3neh_A 103 MLTLEGIEPIGRDLDKLTQLLDGGVLSVGLTWNNANLAADGIMEERGAGLTRFGKDIIHLLNERKVFTDVSHLSVKAFWE 182 (318)
T ss_dssp EEEEESSGGGTTCHHHHHHHHHTTEEEEESCSSSBCSSBBBTTCTTCCCBCHHHHHHHHHHHHHTCEEECTTBCHHHHHH
T ss_pred EEeeechhhcCCCHHHHHHHHHcCCeEEEeeecCCCccccCCCCCCCCCCChhhHHHHHHHHHcCCeEEcCCCCHHHHHH
Confidence 589999999999999999999999999999999998877 9999999999999999999999999
Q ss_pred HHHhcCCCEEEecCCccccCCCCCCCCHHHHHHhhhh
Q psy11267 65 VLNISSAPVIFSHSSAFALCPSPRNVPDPVLKLVFPY 101 (103)
Q Consensus 65 ~l~~s~~Pvi~SHs~~ral~~~~RNl~De~i~~ia~~ 101 (103)
+++.|++| |+||||||++|+||||+||||||+|+++
T Consensus 183 vl~~s~~P-iaSHSnaral~~h~RNl~D~~l~ala~~ 218 (318)
T 3neh_A 183 TLEQAEFV-IASHSNAKAICSHPRNLDDEQIKAMIEH 218 (318)
T ss_dssp HHHHCSSE-EESSCCBTTTSCCTTSBCHHHHHHHHHT
T ss_pred HHHhcCCC-cccccchhhcCCCCCCCCHHHHHHHHHc
Confidence 99999999 9999999999999999999999999975
No 2
>3id7_A Dipeptidase; streptomyces coelicolor A3(2), hydrolase; 1.30A {Streptomyces coelicolor} PDB: 3isi_X* 3itc_A* 3k5x_A* 3s2j_A* 3s2l_A* 3s2m_A* 3s2n_A*
Probab=100.00 E-value=1.2e-44 Score=290.04 Aligned_cols=101 Identities=57% Similarity=0.925 Sum_probs=98.5
Q ss_pred CcccccccccCCcHHHHHHHHHcCccEEeeccCCCCchH-----------------HHHHHHHhcCCeeeccCCCHHHHH
Q psy11267 1 MIGVEGGHSLGNSMAVLRMFYKLGVRYLTLTHACPTPWY-----------------LVVRECNRLGMLIDLSHTSVQTMR 63 (103)
Q Consensus 1 ~l~~Eg~~~l~~~l~~l~~~y~lGvR~i~lt~n~~n~~~-----------------~~i~~mn~lGmiiDlSH~s~~t~~ 63 (103)
+|++||+++|++|++.|+.||++|||+||||||++|+|| ++|+|||++||+||+||+|++||+
T Consensus 119 llgiEg~~~i~~~l~~L~~~y~lGvR~~tLthn~~N~~ad~~~~~~~~~GLT~fG~~vV~eMNrlGmiVDlSH~s~~t~~ 198 (400)
T 3id7_A 119 LMGAEGGHSIDNSLATLRALYALGVRYMTLTHNDNNAWADSATDEPGVGGLSAFGREVVREMNREGMLVDLSHVAATTMR 198 (400)
T ss_dssp EEEEESGGGGTTCHHHHHHHHHTTEEEEESCSSSCCSSBCBTTSCCCSSSBCHHHHHHHHHHHHHTCEEECTTBCHHHHH
T ss_pred EEEEechhhhcCCHHHHHHHHHcCCeEEEeeccCCCcccccCCCCCCCCCCCHHHHHHHHHHHHcCCeEEcCCCCHHHHH
Confidence 589999999999999999999999999999999999887 999999999999999999999999
Q ss_pred HHHHhcCCCEEEecCCccccCCCCCCCCHHHHHHhhhh
Q psy11267 64 HVLNISSAPVIFSHSSAFALCPSPRNVPDPVLKLVFPY 101 (103)
Q Consensus 64 d~l~~s~~Pvi~SHs~~ral~~~~RNl~De~i~~ia~~ 101 (103)
|+++.|++|||+||||||++|+||||+||||||+|+++
T Consensus 199 dvl~~S~~PvIaSHSnaral~~hpRNl~De~lkala~~ 236 (400)
T 3id7_A 199 DALDTSTAPVIFSHSSSRAVCDHPRNIPDDVLERLSAN 236 (400)
T ss_dssp HHHHHCSSCCEESSCCBTTTSCCTTSBCHHHHTTHHHH
T ss_pred HHHHhCCCCEEEecCCccccCCCCCCCCHHHHHHHHHc
Confidence 99999999999999999999999999999999999975
No 3
>3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A
Probab=100.00 E-value=9.7e-44 Score=282.06 Aligned_cols=101 Identities=35% Similarity=0.598 Sum_probs=97.9
Q ss_pred CcccccccccCCcHHHHHHHHHcCccEEeeccCCCCchH----------------------HHHHHHHhcCCeeeccCCC
Q psy11267 1 MIGVEGGHSLGNSMAVLRMFYKLGVRYLTLTHACPTPWY----------------------LVVRECNRLGMLIDLSHTS 58 (103)
Q Consensus 1 ~l~~Eg~~~l~~~l~~l~~~y~lGvR~i~lt~n~~n~~~----------------------~~i~~mn~lGmiiDlSH~s 58 (103)
+|++||+++|++|++.|+.||++|||+||||||++|+|| ++|+|||++||+||+||+|
T Consensus 135 ~l~iEg~~~i~~~l~~L~~~y~lGvR~~~Lt~n~~N~~a~g~~~~~~~~~~~~~GLT~~G~~vV~emnrlGmivDlSH~s 214 (364)
T 3ly0_A 135 IMHMEGAEAIGADLDALHLFHSLGLRSLGPVWSRPTVFGHGVPFRFPGSPDTGEGLTEAGRRLVAECNRLKIMLDLSHLN 214 (364)
T ss_dssp EEEEESCTTSCTTCHHHHHHHHHTEEEEESCSSSCBTTBCBCCCEESCCSCCSCCCCHHHHHHHHHHHHHTCEEBCTTBC
T ss_pred EEEEechhhhCCCHHHHHHHHHhCCeEEEeeccCCCccccccccccCCCCCCCCCCCHHHHHHHHHHHHcCCEEEcCCCC
Confidence 589999999999999999999999999999999988775 9999999999999999999
Q ss_pred HHHHHHHHHhcCCCEEEecCCccccCCCCCCCCHHHHHHhhhh
Q psy11267 59 VQTMRHVLNISSAPVIFSHSSAFALCPSPRNVPDPVLKLVFPY 101 (103)
Q Consensus 59 ~~t~~d~l~~s~~Pvi~SHs~~ral~~~~RNl~De~i~~ia~~ 101 (103)
+++|||+++.|++|||+||||||++|+||||+||||||+|+++
T Consensus 215 ~~t~~dvl~~s~~PviaSHSnaral~~h~RNl~De~l~ala~~ 257 (364)
T 3ly0_A 215 EKGFDDVARLSDAPLVATHSNAHAVTPSTRNLTDRQLAMIRES 257 (364)
T ss_dssp HHHHHHHHHHCSSCCEETTCCBTTTSCCTTSBCHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCeEEeCCchhhcCCCCCCCCHHHHHHHHHc
Confidence 9999999999999999999999999999999999999999975
No 4
>3b40_A PVDM, probable dipeptidase; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.9e-43 Score=284.06 Aligned_cols=101 Identities=28% Similarity=0.453 Sum_probs=97.5
Q ss_pred CcccccccccCCcHHHHHHHHHcCccEEeeccCCCCchH------------------------HHHHHHHhcCCeeeccC
Q psy11267 1 MIGVEGGHSLGNSMAVLRMFYKLGVRYLTLTHACPTPWY------------------------LVVRECNRLGMLIDLSH 56 (103)
Q Consensus 1 ~l~~Eg~~~l~~~l~~l~~~y~lGvR~i~lt~n~~n~~~------------------------~~i~~mn~lGmiiDlSH 56 (103)
+||+||+++|++|++.|+.||++|||+||||||++|.|| ++|+|||++||+||+||
T Consensus 134 ~lgiEg~~~i~~dl~~L~~~y~lGvR~~tLthn~~N~~ads~~~~~~~~~~~~~~~GLT~~G~~vV~eMNrlGmiVDlSH 213 (417)
T 3b40_A 134 VMSMLNAYPLGDDLSQLDKWAARGVRMFGFSYVGNNDWADSSRPLPFFNDSPDALGGLSPLGKQAVERLNDLGVIIDVSQ 213 (417)
T ss_dssp EEEEECSGGGTTCTHHHHHHHHTTCCEEECCSSSCCSSBCBSSCCGGGTCCTTTTSSBCHHHHHHHHHHHHHTCEEECTT
T ss_pred EEEeecchhhcCCHHHHHHHHHcCCcEEEecccCCCccccccccccccCCCCcCCCCcchhHHHHHHHHHHcCCEEECCC
Confidence 589999999999999999999999999999999987654 99999999999999999
Q ss_pred CCHHHHHHHHHhcCCCEEEecCCccccCCCCCCCCHHHHHHhhhh
Q psy11267 57 TSVQTMRHVLNISSAPVIFSHSSAFALCPSPRNVPDPVLKLVFPY 101 (103)
Q Consensus 57 ~s~~t~~d~l~~s~~Pvi~SHs~~ral~~~~RNl~De~i~~ia~~ 101 (103)
+|+++|+|+++.|++|||+||||||++|+||||+||||||+|+++
T Consensus 214 ~s~~t~~dvl~~s~~PVIaSHSnaral~~hpRNl~De~l~~la~~ 258 (417)
T 3b40_A 214 MSTKALEQVAALSRAPIVASHSAPRALVDIKRNLSDHEMQLIKDS 258 (417)
T ss_dssp BCHHHHHHHHHHCSSCEEEEEECBTTTSCCTTSBCHHHHHHHHHT
T ss_pred CCHHHHHHHHHhcCCCEEEeCCchhhcCCCCCCCCHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999975
No 5
>2rag_A Dipeptidase; aminohydrolase, structural genomics, NYSGXRC, target 9257A, protein structure initiative; 2.00A {Caulobacter crescentus}
Probab=100.00 E-value=8.6e-44 Score=286.07 Aligned_cols=101 Identities=32% Similarity=0.494 Sum_probs=98.4
Q ss_pred CcccccccccCCcHHHHHHHHHcCccEEeeccCCCCchH-------------------HHHHHHHhcCCeeeccCCCHHH
Q psy11267 1 MIGVEGGHSLGNSMAVLRMFYKLGVRYLTLTHACPTPWY-------------------LVVRECNRLGMLIDLSHTSVQT 61 (103)
Q Consensus 1 ~l~~Eg~~~l~~~l~~l~~~y~lGvR~i~lt~n~~n~~~-------------------~~i~~mn~lGmiiDlSH~s~~t 61 (103)
+||+||+++|++|++.|+.||++|||+||||||++|+|| ++|+|||++||+||+||+|+++
T Consensus 155 llgiEg~~~i~~dl~~L~~~y~lGvR~~tLthn~~N~~adg~~~~~~~~~~GLT~~G~~vV~eMnrlGmivDlSH~s~~t 234 (417)
T 2rag_A 155 FVSMENSWPVGEDLSLVETFYKEGLRMAGPVHFRNNQLADSSTDPKGKIWNGYSPLGLRWLAEANRLGIVIDVSHASDDV 234 (417)
T ss_dssp EEEEECCGGGTTCTHHHHHHHHTTEEEEESCCSSCCSSBCBSSCTTCCSSSSBCHHHHHHHHHHHHHTCEEBCTTBCHHH
T ss_pred EEEeechhhhcCCHHHHHHHHHcCCeEEEccccCCCccccccCCCCCCCCCCCCHhHHHHHHHHHHcCCEEECCCCCHHH
Confidence 589999999999999999999999999999999998887 9999999999999999999999
Q ss_pred HHHHHHhcCCCEEEecCCccccCCCCCCCCHHHHHHhhhh
Q psy11267 62 MRHVLNISSAPVIFSHSSAFALCPSPRNVPDPVLKLVFPY 101 (103)
Q Consensus 62 ~~d~l~~s~~Pvi~SHs~~ral~~~~RNl~De~i~~ia~~ 101 (103)
|+|+++.|++|||+||||||++|+||||+||||||+|+++
T Consensus 235 ~~dvl~~s~~PvIaSHSnaral~~hpRNl~De~l~~la~~ 274 (417)
T 2rag_A 235 VDQSVALSKAPIIASHSGPKAVYDHPRNLDDARLKKIADA 274 (417)
T ss_dssp HHHHHHHCSSCCEEEEEEETTTSCCTTEECHHHHHHHHHT
T ss_pred HHHHHHhcCCCeEEecCchHhhCCCCCCCCHHHHHHHHHc
Confidence 9999999999999999999999999999999999999975
No 6
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=100.00 E-value=3.5e-43 Score=279.07 Aligned_cols=101 Identities=64% Similarity=1.071 Sum_probs=97.9
Q ss_pred CcccccccccCCcHHHHHHHHHcCccEEeeccCCCCchH----------------------HHHHHHHhcCCeeeccCCC
Q psy11267 1 MIGVEGGHSLGNSMAVLRMFYKLGVRYLTLTHACPTPWY----------------------LVVRECNRLGMLIDLSHTS 58 (103)
Q Consensus 1 ~l~~Eg~~~l~~~l~~l~~~y~lGvR~i~lt~n~~n~~~----------------------~~i~~mn~lGmiiDlSH~s 58 (103)
+|++||+++|++|++.|+.||++|||+||||||++|+|| ++|+|||++||+||+||+|
T Consensus 121 ~l~iEg~~~i~~~l~~L~~~y~lGvR~~~Lthn~~N~~a~~~~~~~~~~~~~~~GLT~~G~~vV~emnrlGmivDlSH~s 200 (369)
T 1itu_A 121 LIGVEGGHSIDSSLGVLRALYQLGMRYLTLTHSCNTPWADNWLVDTGDSEPQSQGLSPFGQRVVKELNRLGVLIDLAHVS 200 (369)
T ss_dssp EEEEECGGGGTTCHHHHHHHHHTTEEEEESCSSSCCSSBCBGGGGGTSSCCSSSSBCHHHHHHHHHHHHHTCEEECTTBC
T ss_pred EEEEecchhhcCCHHHHHHHHHcCCeEEEeecccCCcccccccccCCCCcccCCCcCHhHHHHHHHHHHcCCEEEcCCCC
Confidence 589999999999999999999999999999999988766 9999999999999999999
Q ss_pred HHHHHHHHHhcCCCEEEecCCccccCCCCCCCCHHHHHHhhhh
Q psy11267 59 VQTMRHVLNISSAPVIFSHSSAFALCPSPRNVPDPVLKLVFPY 101 (103)
Q Consensus 59 ~~t~~d~l~~s~~Pvi~SHs~~ral~~~~RNl~De~i~~ia~~ 101 (103)
+++|+|+++.|++|||+||||||++|+||||+||||||+|+++
T Consensus 201 ~~~~~dvl~~s~~PviaSHSn~ral~~h~RNl~De~l~~la~~ 243 (369)
T 1itu_A 201 VATMKATLQLSRAPVIFSHSSAYSVCASRRNVPDDVLRLVKQT 243 (369)
T ss_dssp HHHHHHHHHHCSSCCEESSCCBTTTSCCTTSBCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEeCCChhhcCCCCCCCCHHHHHHHHHc
Confidence 9999999999999999999999999999999999999999975
No 7
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=100.00 E-value=8e-42 Score=266.97 Aligned_cols=101 Identities=29% Similarity=0.436 Sum_probs=98.4
Q ss_pred CcccccccccCCcHHHHHHHHHcCccEEeeccCCCCchH---------------HHHHHHHhcCCeeeccCCCHHHHHHH
Q psy11267 1 MIGVEGGHSLGNSMAVLRMFYKLGVRYLTLTHACPTPWY---------------LVVRECNRLGMLIDLSHTSVQTMRHV 65 (103)
Q Consensus 1 ~l~~Eg~~~l~~~l~~l~~~y~lGvR~i~lt~n~~n~~~---------------~~i~~mn~lGmiiDlSH~s~~t~~d~ 65 (103)
+|++||+++|++|++.|+.||++|||+||||||++|.|| ++|+|||++||+||+||+|+++++|+
T Consensus 89 ~l~iEg~~~i~~~l~~l~~~y~lGvR~~~Lt~n~~N~~~~g~~~~~~GLT~~G~~vV~emnrlGmivDlSH~s~~~~~dv 168 (325)
T 2i5g_A 89 LYGFQNAHAFEDQIGYVEVFKQLGVGIVQMCYNTQNLVGTGCYERDGGLSGFGREIVAEMNRVGIMCDLSHVGSKTSEEV 168 (325)
T ss_dssp EEEESCGGGGTTCTHHHHHHHHTTEEEEESCCSSBCSSCBBTTSCCCCCCHHHHHHHHHHHHHTCEEECTTBCHHHHHHH
T ss_pred EEEEechhhhCCCHHHHHHHHHcCCeEEEeeccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcEEEcCcCCHHHHHHH
Confidence 589999999999999999999999999999999998887 99999999999999999999999999
Q ss_pred HHhcCCCEEEecCCccccCCCCCCCCHHHHHHhhhh
Q psy11267 66 LNISSAPVIFSHSSAFALCPSPRNVPDPVLKLVFPY 101 (103)
Q Consensus 66 l~~s~~Pvi~SHs~~ral~~~~RNl~De~i~~ia~~ 101 (103)
++.|++|||+||||++++|+||||+||||||+|+++
T Consensus 169 l~~s~~Pvi~SHsn~~al~~h~RNl~De~irala~~ 204 (325)
T 2i5g_A 169 ILESKKPVCYSHCLPSGLKEHPRNKSDEELKFIADH 204 (325)
T ss_dssp HHHCSSCCEEEEECBTTTCCCTTSBCHHHHHHHHHT
T ss_pred HHHhCCCEEEeCCCccccCCCCCCCCHHHHHHHHHc
Confidence 999999999999999999999999999999999975
No 8
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=96.25 E-value=0.034 Score=40.17 Aligned_cols=84 Identities=18% Similarity=0.198 Sum_probs=59.1
Q ss_pred HHHHHHHHHcCccEEeeccCCC--C-----chHHHHHHHHhcCCeeeccCCCHH---HHHHHHHhcCCCEEEecCCcccc
Q psy11267 14 MAVLRMFYKLGVRYLTLTHACP--T-----PWYLVVRECNRLGMLIDLSHTSVQ---TMRHVLNISSAPVIFSHSSAFAL 83 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n~~--n-----~~~~~i~~mn~lGmiiDlSH~s~~---t~~d~l~~s~~Pvi~SHs~~ral 83 (103)
.+.|+.+.+.|+|-+-+..+.. . .|-.+++.++++|+.|++ |++.. .+.++++....++|+.|.+.-..
T Consensus 95 ~~el~~~~~~g~~Gi~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~i-H~~~~~~~~~~~~~~~~pl~~vi~H~g~~~~ 173 (288)
T 2ffi_A 95 QATLAEMARLGVRGVRLNLMGQDMPDLTGAQWRPLLERIGEQGWHVEL-HRQVADIPVLVRALQPYGLDIVIDHFGRPDA 173 (288)
T ss_dssp HHHHHHHHTTTCCEEECCCSSSCCCCTTSTTTHHHHHHHHHHTCEEEE-CSCTTTHHHHHHHHTTTTCCEEESGGGSCCT
T ss_pred HHHHHHHHHCCCeEEEEecccCCCCCcccHHHHHHHHHHHHCCCeEEE-eechhhHHHHHHHHHHCCCCEEEECCCCCCC
Confidence 4778888888988886544332 1 233999999999999999 99864 34555555456799999987766
Q ss_pred CCCCCCCCHHHHHHh
Q psy11267 84 CPSPRNVPDPVLKLV 98 (103)
Q Consensus 84 ~~~~RNl~De~i~~i 98 (103)
....|+..-++++.+
T Consensus 174 ~~~~~~~~~~~~~~l 188 (288)
T 2ffi_A 174 RRGLGQPGFAELLTL 188 (288)
T ss_dssp TSCTTCTTHHHHTTC
T ss_pred CCCCCChhHHHHHHH
Confidence 555555555555544
No 9
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=92.18 E-value=0.45 Score=34.92 Aligned_cols=67 Identities=18% Similarity=0.240 Sum_probs=50.8
Q ss_pred cHHHHHHHHHcCccEEeeccCCCC-------chHHHHHHHHhcCCeeeccCCCHHHHHHHHHhc---CCCEEEecCCc
Q psy11267 13 SMAVLRMFYKLGVRYLTLTHACPT-------PWYLVVRECNRLGMLIDLSHTSVQTMRHVLNIS---SAPVIFSHSSA 80 (103)
Q Consensus 13 ~l~~l~~~y~lGvR~i~lt~n~~n-------~~~~~i~~mn~lGmiiDlSH~s~~t~~d~l~~s---~~Pvi~SHs~~ 80 (103)
..+.|+.+.+.|+|-+++.+.... .|-.+++.+.++|+.|++ |+......++.+.. ..++|+.|.+-
T Consensus 107 ~~~eL~~l~~~gv~Gi~l~~~~~~~~~~~~~~~~~~~~~a~~~glpv~i-H~~~~~l~~~~~~l~~~p~~~Vi~H~g~ 183 (294)
T 4i6k_A 107 TFNELVNLKAQGIVGVRLNLFGLNLPALNTPDWQKFLRNVESLNWQVEL-HAPPKYLVQLLPQLNEYSFDVVIDHFGR 183 (294)
T ss_dssp CHHHHHHHHTTTEEEEEEECTTSCCCCSSSHHHHHHHHHHHHTTCEEEE-ECCHHHHHHHHHHHTTSSSCEEESGGGC
T ss_pred cHHHHHHHHHCCCcEEEeccCCCCCCCcccHHHHHHHHHHHHcCCEEEE-eeCcchHHHHHHHHHHCCCCEEEECCCC
Confidence 457888888899999998765321 233899999999999987 88887766666554 35689999874
No 10
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=85.13 E-value=6.9 Score=27.59 Aligned_cols=65 Identities=11% Similarity=0.093 Sum_probs=48.4
Q ss_pred HHHHHHHHcCccEEeeccCCCCchHHHHHHHHhcCCeeeccCCC---------------------HHHHHHHHHhc---C
Q psy11267 15 AVLRMFYKLGVRYLTLTHACPTPWYLVVRECNRLGMLIDLSHTS---------------------VQTMRHVLNIS---S 70 (103)
Q Consensus 15 ~~l~~~y~lGvR~i~lt~n~~n~~~~~i~~mn~lGmiiDlSH~s---------------------~~t~~d~l~~s---~ 70 (103)
+.++...++|+..+.+.+.......++-+.+.+.|+-+-.-|+. .+.+.++++.+ .
T Consensus 27 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~lG 106 (269)
T 3ngf_A 27 ERFRLAAEAGFGGVEFLFPYDFDADVIARELKQHNLTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVDIALHYALALD 106 (269)
T ss_dssp HHHHHHHHTTCSEEECSCCTTSCHHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEecCCccCCHHHHHHHHHHcCCcEEEEecCCCccccCCCCcCCCccHHHHHHHHHHHHHHHHHHcC
Confidence 57889999999999998755445558888899999987765642 12345555554 6
Q ss_pred CCEEEecCC
Q psy11267 71 APVIFSHSS 79 (103)
Q Consensus 71 ~Pvi~SHs~ 79 (103)
.|.|..|++
T Consensus 107 a~~v~~~~g 115 (269)
T 3ngf_A 107 CRTLHAMSG 115 (269)
T ss_dssp CCEEECCBC
T ss_pred CCEEEEccC
Confidence 899999987
No 11
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=84.77 E-value=1.4 Score=32.00 Aligned_cols=51 Identities=12% Similarity=0.095 Sum_probs=31.3
Q ss_pred HHHHHHhcCCeeeccCCCH--HHHHHHHHhc---CC---CEEEecCCccccCCCCCCCCHHHHHHhhh
Q psy11267 41 VVRECNRLGMLIDLSHTSV--QTMRHVLNIS---SA---PVIFSHSSAFALCPSPRNVPDPVLKLVFP 100 (103)
Q Consensus 41 ~i~~mn~lGmiiDlSH~s~--~t~~d~l~~s---~~---Pvi~SHs~~ral~~~~RNl~De~i~~ia~ 100 (103)
.++...++|+.| +.|+++ +...|+++.. .. ++++.|++. +.+.++++++++
T Consensus 156 ~~~lA~~~~~pv-~iH~~~~~~~~~~~~~~l~~~~~~~~~~~i~H~~~--------~~~~~~~~~~~~ 214 (314)
T 2vc7_A 156 AAIANKETKVPI-ITHSNAHNNTGLEQQRILTEEGVDPGKILIGHLGD--------TDNIDYIKKIAD 214 (314)
T ss_dssp HHHHHHHHCCCE-EEECCTTTTHHHHHHHHHHHTTCCGGGEEETTGGG--------CCCHHHHHHHHH
T ss_pred HHHHHHHHCCEE-EEeCCCcccChHHHHHHHHHcCCCcccEEEECCCC--------CCCHHHHHHHHH
Confidence 444456679999 459973 4445666553 32 578999764 234566666554
No 12
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=80.21 E-value=4.1 Score=30.20 Aligned_cols=89 Identities=17% Similarity=0.140 Sum_probs=58.2
Q ss_pred HHHHHHHHHcCccEEeecc---CCCCchH---------HHHHHHHhcCCeeeccCCCHH-----HHHHHHHhcCCC--EE
Q psy11267 14 MAVLRMFYKLGVRYLTLTH---ACPTPWY---------LVVRECNRLGMLIDLSHTSVQ-----TMRHVLNISSAP--VI 74 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~---n~~n~~~---------~~i~~mn~lGmiiDlSH~s~~-----t~~d~l~~s~~P--vi 74 (103)
++.++.+...|-..+.|.+ .|...+. ..+++.-.+-+++|.||..-. .+-.+.-...+- +|
T Consensus 147 ~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~i 226 (262)
T 1zco_A 147 LYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGRRSLVIPLAKAAYAIGADGIMV 226 (262)
T ss_dssp HHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCSGGGHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCccchHHHHHHHHHHcCCCEEEE
Confidence 4466777888988888877 1211111 444443345677999998654 332222234555 88
Q ss_pred EecC-CccccCCCCCCCCHHHHHHhhhhc
Q psy11267 75 FSHS-SAFALCPSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 75 ~SHs-~~ral~~~~RNl~De~i~~ia~~~ 102 (103)
=+|- --+++++++=.++-++++.+.+.+
T Consensus 227 E~H~~~d~al~D~~~sl~p~~~~~l~~~i 255 (262)
T 1zco_A 227 EVHPEPEKALSDSQQQLTFDDFLQLLKEL 255 (262)
T ss_dssp EBCSSGGGCSSCTTTCBCHHHHHHHHHHH
T ss_pred EecCCccccCChhhcCCCHHHHHHHHHHH
Confidence 8994 456788999999999999887653
No 13
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=78.02 E-value=1.5 Score=32.59 Aligned_cols=67 Identities=13% Similarity=0.182 Sum_probs=46.2
Q ss_pred cHHHHHHHHHcCccEEeeccCCC--C-----chHHHHHHHHhcCCeeeccCCCHH---HHHHHHHhcCCCEEEecCCcc
Q psy11267 13 SMAVLRMFYKLGVRYLTLTHACP--T-----PWYLVVRECNRLGMLIDLSHTSVQ---TMRHVLNISSAPVIFSHSSAF 81 (103)
Q Consensus 13 ~l~~l~~~y~lGvR~i~lt~n~~--n-----~~~~~i~~mn~lGmiiDlSH~s~~---t~~d~l~~s~~Pvi~SHs~~r 81 (103)
..+.|+.+.++|+|-+-+.-... . .|-.+.+.+.+ |+.+|+ |+... .+.++++..+.|||+-|.+.-
T Consensus 108 ~~~eL~~l~~~G~rGvR~~~~~~~~~~~~~~~~~~~~~~l~~-gl~v~l-~~~~~~l~~l~~~~~~~~~~iVidH~G~p 184 (303)
T 4d9a_A 108 DEAELAALHEGGMRGIRFNFLKRLVDDAPKDKFLEVAGRLPA-GWHVVI-YFEADILEELRPFMDAIPVPIVIDHMGRP 184 (303)
T ss_dssp CHHHHHHHHHTTEEEEEEECCTTTCSCCCHHHHHHHHTSCCT-TCEEEE-ECCGGGHHHHHHHHHHCSSCEEEGGGGCC
T ss_pred CHHHHHHHHHCCCCEEEeecccCCccccCHHHHHHHHHHHhc-CCEEEE-ecccccHHHHHHHHHHCCCcEEEeCCCCC
Confidence 35788888888888776655332 1 12278888889 999997 44433 344555555899999998853
No 14
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=74.68 E-value=11 Score=27.27 Aligned_cols=65 Identities=23% Similarity=0.339 Sum_probs=47.3
Q ss_pred HHHHHHHHHcCccEEeeccCC--------CCchHHHHHHHHhcCCeeeccCCCH-----------HHHHHHHHhc-CCCE
Q psy11267 14 MAVLRMFYKLGVRYLTLTHAC--------PTPWYLVVRECNRLGMLIDLSHTSV-----------QTMRHVLNIS-SAPV 73 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n~--------~n~~~~~i~~mn~lGmiiDlSH~s~-----------~t~~d~l~~s-~~Pv 73 (103)
++.|+.+.+.|++-+.+.-.. +..|-.+++.++++|+.|.+ |++. ..+.++++.. +.++
T Consensus 108 ~~eL~~~~~~g~~Gi~~~~~~~~~~~~~~d~~~~~~~~~a~e~glpv~i-H~~~~~~~~~~~~~p~~~~~v~~~~P~l~i 186 (291)
T 3irs_A 108 MAQMQEILDLGIRIVNLEPGVWATPMHVDDRRLYPLYAFCEDNGIPVIM-MTGGNAGPDITYTNPEHIDRVLGDFPDLTV 186 (291)
T ss_dssp HHHHHHHHHTTCCCEEECGGGSSSCCCTTCGGGHHHHHHHHHTTCCEEE-ECSSSCSSSGGGGCHHHHHHHHHHCTTCCE
T ss_pred HHHHHHHHhCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHcCCeEEE-eCCCCCCCCCccCCHHHHHHHHHHCCCCEE
Confidence 567777778899998887221 12344999999999999985 5543 4677777765 5779
Q ss_pred EEecCC
Q psy11267 74 IFSHSS 79 (103)
Q Consensus 74 i~SHs~ 79 (103)
|+.|.+
T Consensus 187 vl~H~G 192 (291)
T 3irs_A 187 VSSHGN 192 (291)
T ss_dssp EEEGGG
T ss_pred EeecCC
Confidence 999976
No 15
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=72.66 E-value=18 Score=25.47 Aligned_cols=81 Identities=16% Similarity=0.257 Sum_probs=52.1
Q ss_pred HHHHHHHHcCccEEeeccCCCCc-----hHHHHHHHHhcCCeeeccCCC---------------------------HHHH
Q psy11267 15 AVLRMFYKLGVRYLTLTHACPTP-----WYLVVRECNRLGMLIDLSHTS---------------------------VQTM 62 (103)
Q Consensus 15 ~~l~~~y~lGvR~i~lt~n~~n~-----~~~~i~~mn~lGmiiDlSH~s---------------------------~~t~ 62 (103)
+.++...++|+..+.+....... ..++-+.+.+.|+-+-.-+++ .+.+
T Consensus 25 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 104 (290)
T 3tva_A 25 VHLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEM 104 (290)
T ss_dssp BCHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHHH
Confidence 36788899999999999754322 227888889999977654331 1234
Q ss_pred HHHHHhc---CCCEEEecCCccccCCCCCCCCHHHHHHhhhh
Q psy11267 63 RHVLNIS---SAPVIFSHSSAFALCPSPRNVPDPVLKLVFPY 101 (103)
Q Consensus 63 ~d~l~~s---~~Pvi~SHs~~ral~~~~RNl~De~i~~ia~~ 101 (103)
.++++.+ ..|.|..|++.. |.. +++..+.+++.
T Consensus 105 ~~~i~~a~~lG~~~v~~~~G~~-----~~~-~~~~~~~~~~~ 140 (290)
T 3tva_A 105 KEISDFASWVGCPAIGLHIGFV-----PES-SSPDYSELVRV 140 (290)
T ss_dssp HHHHHHHHHHTCSEEEECCCCC-----CCT-TSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCC-----ccc-chHHHHHHHHH
Confidence 4455544 799999998742 122 55555555443
No 16
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=72.45 E-value=25 Score=25.44 Aligned_cols=82 Identities=16% Similarity=0.057 Sum_probs=55.0
Q ss_pred HHHHHHHHHcCccEEeeccCCCC-c----hHHHHHHHHhcCCeeeccCCCH---------------------H----HHH
Q psy11267 14 MAVLRMFYKLGVRYLTLTHACPT-P----WYLVVRECNRLGMLIDLSHTSV---------------------Q----TMR 63 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n~~n-~----~~~~i~~mn~lGmiiDlSH~s~---------------------~----t~~ 63 (103)
.+.++...++|+..+.+...... . ..++-+.+.+.|+-+-..|.+- + .+.
T Consensus 32 ~~~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~~GL~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 111 (303)
T 3l23_A 32 AANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDAGLKIISSHVNPVDTSISDPFKAMIFKYSKEVTPKIMEYWK 111 (303)
T ss_dssp HHHHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHHTTCEEEEEECCCBCTTCSSTTTTBCCSCCTTTHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHHcCCeEEEEecccccccccCcccccccccchhhHHHHHHHHH
Confidence 35889999999999999752211 2 2278888899999987777642 2 244
Q ss_pred HHHHhc---CCCEEEecCCccccCCCCCCCCHHHHHHhhhhc
Q psy11267 64 HVLNIS---SAPVIFSHSSAFALCPSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 64 d~l~~s---~~Pvi~SHs~~ral~~~~RNl~De~i~~ia~~~ 102 (103)
++++.+ ..|.|..|+.. ...++++.+.+++.|
T Consensus 112 ~~i~~A~~lG~~~v~~~~~~-------~~~~~~~~~~~~~~l 146 (303)
T 3l23_A 112 ATAADHAKLGCKYLIQPMMP-------TITTHDEAKLVCDIF 146 (303)
T ss_dssp HHHHHHHHTTCSEEEECSCC-------CCCSHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCCC-------CCCCHHHHHHHHHHH
Confidence 444544 68988877532 224677777666554
No 17
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=69.92 E-value=5.9 Score=28.92 Aligned_cols=70 Identities=9% Similarity=-0.041 Sum_probs=48.6
Q ss_pred cHHHHHHHHHcCccEEeeccCCCC-c--h------HHHHHHHHhcCCeeeccCCCHH---HHHHHHHhc-CCCEEEecCC
Q psy11267 13 SMAVLRMFYKLGVRYLTLTHACPT-P--W------YLVVRECNRLGMLIDLSHTSVQ---TMRHVLNIS-SAPVIFSHSS 79 (103)
Q Consensus 13 ~l~~l~~~y~lGvR~i~lt~n~~n-~--~------~~~i~~mn~lGmiiDlSH~s~~---t~~d~l~~s-~~Pvi~SHs~ 79 (103)
..+.|+.+.+.|+|-+.+...... + + ...++.+.++|+.|++ |+... .+.++++.. +.+||+.|.+
T Consensus 90 ~~~~L~~l~~~gv~Gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~glpv~i-h~~~~~l~~l~~ll~~~P~l~iVi~H~G 168 (303)
T 4do7_A 90 LAERVAEWRGTKLRGFRHQLQDEADVRAFVDDADFARGVAWLQANDYVYDV-LVFERQLPDVQAFCARHDAHWLVLDHAG 168 (303)
T ss_dssp HHHHHTTCCSSCEEEEECCGGGSSCHHHHHHCHHHHHHHHHHHHTTCEEEE-CCCGGGHHHHHHHHHHCCSSCEEEGGGG
T ss_pred HHHHHHHHhhcCceEEEecCcCCCCccccccCHHHHHHHHHHHHCCCeEEE-ecCHHHHHHHHHHHHHCCCCCEEEeCCC
Confidence 355677766778998888765432 1 1 2889999999999998 45443 344555554 4889999998
Q ss_pred cccc
Q psy11267 80 AFAL 83 (103)
Q Consensus 80 ~ral 83 (103)
.-.+
T Consensus 169 ~p~~ 172 (303)
T 4do7_A 169 KPAL 172 (303)
T ss_dssp CCCG
T ss_pred CCCc
Confidence 6433
No 18
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=69.41 E-value=36 Score=26.15 Aligned_cols=68 Identities=15% Similarity=0.254 Sum_probs=47.0
Q ss_pred cHHHHHHHHHcCc--cEEeeccCCCCchHHHHHHHHhcCCeeeccCCC----------HHHHHHHHHhc-CCC---EEEe
Q psy11267 13 SMAVLRMFYKLGV--RYLTLTHACPTPWYLVVRECNRLGMLIDLSHTS----------VQTMRHVLNIS-SAP---VIFS 76 (103)
Q Consensus 13 ~l~~l~~~y~lGv--R~i~lt~n~~n~~~~~i~~mn~lGmiiDlSH~s----------~~t~~d~l~~s-~~P---vi~S 76 (103)
.++.++.+.+.|+ ..+.+.|.|.+.-.+..+++-++|..|-.++.+ .+....+.+.. ..| ++.|
T Consensus 219 ~~e~l~iL~eeG~~~~~vvi~H~~~~~d~~~~~~~l~~G~yl~fD~iG~~~~~~~p~d~~r~~~l~~lv~~g~~drILLs 298 (360)
T 3tn4_A 219 GPEQAAYLLEHGADPKKIVIGHMCDNTDPDYHRKTLAYGVYIAFDRFGIQGMVGAPTDEERVRTLLALLRDGYEKQIMLS 298 (360)
T ss_dssp HHHHHHHHHHTTCCGGGEEECCGGGCCCHHHHHHHHTTTCEEEECCTTCCCSTTCCCHHHHHHHHHHHHHTTCGGGEEEC
T ss_pred CHHHHHHHHHcCCCCCceEEEcCCCCCCHHHHHHHHHcCCEEEEcccccccccCCCChHHHHHHHHHHHHhcCcceEEEe
Confidence 4578889999997 468888966555447888999999999888742 23333333332 233 8888
Q ss_pred cCCc
Q psy11267 77 HSSA 80 (103)
Q Consensus 77 Hs~~ 80 (103)
|-.+
T Consensus 299 tDa~ 302 (360)
T 3tn4_A 299 HDTV 302 (360)
T ss_dssp CCCE
T ss_pred cCCC
Confidence 8864
No 19
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=68.53 E-value=7.1 Score=29.48 Aligned_cols=74 Identities=15% Similarity=0.073 Sum_probs=47.3
Q ss_pred cCCcHHHHHHHHHcC-ccEEeeccCCCCchHHHHHHHHhcCCeeecc--CCC------HHHHHHHHHhcCCCEEEecCCc
Q psy11267 10 LGNSMAVLRMFYKLG-VRYLTLTHACPTPWYLVVRECNRLGMLIDLS--HTS------VQTMRHVLNISSAPVIFSHSSA 80 (103)
Q Consensus 10 l~~~l~~l~~~y~lG-vR~i~lt~n~~n~~~~~i~~mn~lGmiiDlS--H~s------~~t~~d~l~~s~~Pvi~SHs~~ 80 (103)
++.-++.|+.+++.| ||++|++-.....+.++++.+.+.|+-+++- +.+ +..+.+.+.....+|++--.-+
T Consensus 167 ~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~~~~~~~e~~ll~~~~~~gI~v~a~spL~ 246 (353)
T 3erp_A 167 LKETMKALDHLVRHGKALYVGISNYPADLARQAIDILEDLGTPCLIHQPKYSLFERWVEDGLLALLQEKGVGSIAFSPLA 246 (353)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCEEEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBSTTG
T ss_pred HHHHHHHHHHHHHCCCccEEEecCCCHHHHHHHHHHHHHcCCCeEEeeccccccccchhhHHHHHHHHcCCeEEEecccc
Confidence 344577899999999 9999998654333336666566666555432 111 3356777777788888765555
Q ss_pred ccc
Q psy11267 81 FAL 83 (103)
Q Consensus 81 ral 83 (103)
.++
T Consensus 247 ~G~ 249 (353)
T 3erp_A 247 GGQ 249 (353)
T ss_dssp GGT
T ss_pred ccc
Confidence 543
No 20
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=67.42 E-value=20 Score=25.19 Aligned_cols=67 Identities=9% Similarity=0.009 Sum_probs=44.1
Q ss_pred HHHHHHHH-HcCccEEeeccCCC---CchHHHHHHHHhc-CCeeeccCCCH-------HHHHHHHHhc-CCCEEEecCCc
Q psy11267 14 MAVLRMFY-KLGVRYLTLTHACP---TPWYLVVRECNRL-GMLIDLSHTSV-------QTMRHVLNIS-SAPVIFSHSSA 80 (103)
Q Consensus 14 l~~l~~~y-~lGvR~i~lt~n~~---n~~~~~i~~mn~l-GmiiDlSH~s~-------~t~~d~l~~s-~~Pvi~SHs~~ 80 (103)
++.|+.+. +.|++.++...... ..|-.+++.++++ |+.|- -|+.. ..+.++++.. +.+||..|++.
T Consensus 104 ~~el~~~~~~~g~~gi~~~g~~~~~~~~~~~~~~~a~~~~~lpv~-iH~~~~~~~~~~~~~~~~l~~~p~l~iv~~H~G~ 182 (272)
T 3cjp_A 104 NSYIEENIVNNKLVGIGELTPASGQIKSLKPIFKYSMDSGSLPIW-IHAFNPLVLQDIKEIAELCKAFPKVPVILGHMGG 182 (272)
T ss_dssp HHHHHHHTTTTTCSEEEEECCCTTCGGGGHHHHHHHHHTTCCCEE-ECCSTTCCHHHHHHHHHHHHHSTTSCEEEGGGGG
T ss_pred HHHHHHHHHhcCceEEEecCCCCCccHHHHHHHHHHHhccCCcEE-EeCCCCCccccHHHHHHHHHHCCCceEEEECCCC
Confidence 45566643 56888887654322 2355999999999 99884 47773 3355555554 35699999985
Q ss_pred c
Q psy11267 81 F 81 (103)
Q Consensus 81 r 81 (103)
.
T Consensus 183 ~ 183 (272)
T 3cjp_A 183 S 183 (272)
T ss_dssp G
T ss_pred c
Confidence 4
No 21
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=67.01 E-value=17 Score=27.15 Aligned_cols=73 Identities=11% Similarity=0.071 Sum_probs=44.6
Q ss_pred cCCcHHHHHHHHHcC-ccEEeeccCCCCchHHHHHHHHhcCCeeecc--CCC------HH-HHHHHHHhcCCCEEEecCC
Q psy11267 10 LGNSMAVLRMFYKLG-VRYLTLTHACPTPWYLVVRECNRLGMLIDLS--HTS------VQ-TMRHVLNISSAPVIFSHSS 79 (103)
Q Consensus 10 l~~~l~~l~~~y~lG-vR~i~lt~n~~n~~~~~i~~mn~lGmiiDlS--H~s------~~-t~~d~l~~s~~Pvi~SHs~ 79 (103)
++.-++.|+.+++.| ||++|++-.....+.++++-+.+.|.-+++- +.+ ++ .+.+.++.....|++--.-
T Consensus 146 ~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~~l~~~~~~~gi~v~a~spL 225 (346)
T 3n6q_A 146 MEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPL 225 (346)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHTTTCCCCEEECBCBTTBCHHHHTTHHHHHHHHTCEEEEBSTT
T ss_pred HHHHHHHHHHHHHcCCeeEEEeCCCCHHHHHHHHHHHHHcCCCeEEEeccCchhhcCcchhhHHHHHHHcCCeEEEeccc
Confidence 344567889999999 9999998643333335555555566544432 111 22 4666677677887776555
Q ss_pred ccc
Q psy11267 80 AFA 82 (103)
Q Consensus 80 ~ra 82 (103)
+.+
T Consensus 226 ~~G 228 (346)
T 3n6q_A 226 AQG 228 (346)
T ss_dssp GGG
T ss_pred cCe
Confidence 554
No 22
>1ayg_A Cytochrome C-552; electron transport, porphyrin, ferrous iron; HET: HEC; NMR {Hydrogenobacter thermophilus} SCOP: a.3.1.1 PDB: 1ynr_A* 2ai5_A*
Probab=65.76 E-value=2.8 Score=24.34 Aligned_cols=14 Identities=29% Similarity=0.406 Sum_probs=13.2
Q ss_pred CCCHHHHHHhhhhc
Q psy11267 89 NVPDPVLKLVFPYL 102 (103)
Q Consensus 89 Nl~De~i~~ia~~~ 102 (103)
.|||+++++|+++|
T Consensus 63 ~Lsd~ei~~l~~yl 76 (80)
T 1ayg_A 63 NVTDAEAKQLAQWI 76 (80)
T ss_dssp CCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 89999999999986
No 23
>2d0s_A Cytochrome C, cytochrome C552; heme protein, electron transport; HET: HEC; 2.20A {Hydrogenophilus thermoluteolus}
Probab=64.34 E-value=3.2 Score=23.96 Aligned_cols=16 Identities=6% Similarity=0.260 Sum_probs=14.1
Q ss_pred CCCCHHHHHHhhhhcC
Q psy11267 88 RNVPDPVLKLVFPYLT 103 (103)
Q Consensus 88 RNl~De~i~~ia~~~~ 103 (103)
..|||+++++|+++|.
T Consensus 61 ~~Ls~~ei~~l~~yl~ 76 (79)
T 2d0s_A 61 PQVAEADIEKIVRWVL 76 (79)
T ss_dssp TTSCHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHH
Confidence 4899999999999873
No 24
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=64.33 E-value=32 Score=23.61 Aligned_cols=66 Identities=8% Similarity=0.068 Sum_probs=47.7
Q ss_pred HHHHHHHHcCccEEeeccCCCCchHHHHHHHHhcCCeeeccCCC---------------------HHHHHHHHHhc---C
Q psy11267 15 AVLRMFYKLGVRYLTLTHACPTPWYLVVRECNRLGMLIDLSHTS---------------------VQTMRHVLNIS---S 70 (103)
Q Consensus 15 ~~l~~~y~lGvR~i~lt~n~~n~~~~~i~~mn~lGmiiDlSH~s---------------------~~t~~d~l~~s---~ 70 (103)
+.++...++|+..+.+.........++-+.+.+.|+-+-.-|+. .+.+..+++.+ .
T Consensus 19 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 98 (260)
T 1k77_A 19 ERFAAARKAGFDAVEFLFPYNYSTLQIQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLALEYALALN 98 (260)
T ss_dssp GHHHHHHHHTCSEEECSCCTTSCHHHHHHHHHHTTCEEEEEECCCCCGGGTCSCSTTCTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCEEEecCCCCCCHHHHHHHHHHcCCceEEEecCCcccccccCCCCCChhHHHHHHHHHHHHHHHHHHcC
Confidence 57888899999999998754445558888889999987755542 12344455544 7
Q ss_pred CCEEEecCCc
Q psy11267 71 APVIFSHSSA 80 (103)
Q Consensus 71 ~Pvi~SHs~~ 80 (103)
.|.|..|++.
T Consensus 99 ~~~v~~~~g~ 108 (260)
T 1k77_A 99 CEQVHVMAGV 108 (260)
T ss_dssp CSEEECCCCB
T ss_pred CCEEEECcCC
Confidence 8999999764
No 25
>1kx2_A Mono-heme C-type cytochrome SCYA; HAEM protein, ferrocytochrome, electron transport, GRAM negative, bacteria; HET: HEC; NMR {Shewanella putrefaciens} SCOP: a.3.1.1 PDB: 1kx7_A*
Probab=63.91 E-value=3.1 Score=24.45 Aligned_cols=15 Identities=13% Similarity=0.310 Sum_probs=13.5
Q ss_pred CCCCHHHHHHhhhhc
Q psy11267 88 RNVPDPVLKLVFPYL 102 (103)
Q Consensus 88 RNl~De~i~~ia~~~ 102 (103)
..|||+++++|++++
T Consensus 63 ~~Lsd~ei~~l~~Yi 77 (81)
T 1kx2_A 63 TDCTDEDYKAAIEFM 77 (81)
T ss_dssp SSCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH
Confidence 479999999999987
No 26
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=63.02 E-value=30 Score=23.88 Aligned_cols=64 Identities=19% Similarity=0.200 Sum_probs=40.8
Q ss_pred HHHHHHHHH----cCccEEeeccCCC-CchH-------HHHHHHHhcCCeeeccCCC--HHHHHHHHHhcC---CCEEEe
Q psy11267 14 MAVLRMFYK----LGVRYLTLTHACP-TPWY-------LVVRECNRLGMLIDLSHTS--VQTMRHVLNISS---APVIFS 76 (103)
Q Consensus 14 l~~l~~~y~----lGvR~i~lt~n~~-n~~~-------~~i~~mn~lGmiiDlSH~s--~~t~~d~l~~s~---~Pvi~S 76 (103)
++.|+.+.+ .|++.+|+-++.. .+.. .+++.+.++|+.|.+ |+. ...+.++++..+ .++|.
T Consensus 75 ~~~l~~~~~~~~~~~iGe~Gl~~~~~~~~~~~~~~~~~~~~~~a~~~~~pv~i-H~~~~~~~~~~~l~~~p~~~~~~i~- 152 (265)
T 2gzx_A 75 LEWIESLAQHPKVIGIGEMGLDYHWDKSPADVQKEVFRKQIALAKRLKLPIII-HNREATQDCIDILLEEHAEEVGGIM- 152 (265)
T ss_dssp HHHHHHHTTSTTEEEEEEEEEECSCCSSCHHHHHHHHHHHHHHHHHHTCCEEE-EEESCHHHHHHHHHHTTGGGTCEEE-
T ss_pred HHHHHHHhcCCCEEEEEeccCCCCCCCCCHHHHHHHHHHHHHHHHHcCCcEEE-EecccHHHHHHHHHhcCCCCCcEEE-
Confidence 555555543 2677777766542 2222 788888999999998 874 455666666654 45665
Q ss_pred cCC
Q psy11267 77 HSS 79 (103)
Q Consensus 77 Hs~ 79 (103)
|..
T Consensus 153 H~~ 155 (265)
T 2gzx_A 153 HSF 155 (265)
T ss_dssp TTC
T ss_pred EcC
Confidence 654
No 27
>2c4w_A 3-dehydroquinate dehydratase; 3-dehydroquinase, shikimate pathway, aromatic amino acid biosynthesis, lyase, sulphonamide; HET: GAJ; 1.55A {Helicobacter pylori} PDB: 2c57_A* 2xda_A* 1j2y_A* 2wks_A* 2xb9_A* 2c4v_A* 2xd9_A*
Probab=62.72 E-value=13 Score=26.60 Aligned_cols=65 Identities=22% Similarity=0.342 Sum_probs=48.3
Q ss_pred HHHHHHHHcCccEEeeccCCCCchHHHHHHHHhc------CCeee---ccCCCHHHHHHHHHhcCCCEEEec-CCc
Q psy11267 15 AVLRMFYKLGVRYLTLTHACPTPWYLVVRECNRL------GMLID---LSHTSVQTMRHVLNISSAPVIFSH-SSA 80 (103)
Q Consensus 15 ~~l~~~y~lGvR~i~lt~n~~n~~~~~i~~mn~l------GmiiD---lSH~s~~t~~d~l~~s~~Pvi~SH-s~~ 80 (103)
..++.....|-.-+.+.+...|.=|++|..+.+. |++|+ .+|.|. +.+||+.....|+|=-| ||+
T Consensus 41 ~~l~~~a~~~~~g~~l~~~QSN~EGeLId~Ih~a~~~~~dgIIINpgAyTHtSv-AlrDAl~~v~~P~VEVHiSNi 115 (176)
T 2c4w_A 41 EIMQTFVKQGNLDVELEFFQTNFEGEIIDKIQESVGSEYEGIIINPGAFSHTSI-AIADAIMLAGKPVIEVHLTNI 115 (176)
T ss_dssp HHHHHHHHHTTCCEEEEEEECSCHHHHHHHHHHHHSSSCCEEEEECGGGGGTCH-HHHHHHHTSSSCEEEEESSCG
T ss_pred HHHHHHhccccCCCEEEEEeeCcHHHHHHHHHHhccCCeeEEEECcchhccchH-HHHHHHHhCCCCEEEEEecCc
Confidence 4566666655555678887788888777766442 67887 579998 78999999999999666 444
No 28
>1gks_A Cytochrome C551; halophilic purple phototrophic bacterium, electron transport; HET: HEM; NMR {Halorhodospira halophila} SCOP: a.3.1.1
Probab=62.41 E-value=3.1 Score=24.29 Aligned_cols=17 Identities=12% Similarity=0.077 Sum_probs=14.3
Q ss_pred CCCCCCHHHHHHhhhhc
Q psy11267 86 SPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 86 ~~RNl~De~i~~ia~~~ 102 (103)
....|||++|++|++++
T Consensus 58 ~~~~Lsd~ei~~l~~yi 74 (78)
T 1gks_A 58 YDGRADREDLVKAIEYM 74 (78)
T ss_dssp CBTTBCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHH
Confidence 33579999999999986
No 29
>1c53_A Cytochrome C553; electron transport; HET: HEM; 1.80A {Desulfovibrio vulgaris str} SCOP: a.3.1.1 PDB: 1dvh_A* 1dwl_B* 1e08_E* 2dvh_A*
Probab=62.35 E-value=3.2 Score=24.08 Aligned_cols=16 Identities=19% Similarity=0.351 Sum_probs=14.1
Q ss_pred CCCCCHHHHHHhhhhc
Q psy11267 87 PRNVPDPVLKLVFPYL 102 (103)
Q Consensus 87 ~RNl~De~i~~ia~~~ 102 (103)
...|||+++++|++++
T Consensus 61 ~~~Ls~~ei~~l~~Yl 76 (79)
T 1c53_A 61 VKRYSDEEMKAMADYM 76 (79)
T ss_pred HhhCCHHHHHHHHHHH
Confidence 3579999999999987
No 30
>2kvc_A Putative uncharacterized protein; structural genomics, seattle structural genomi for infectious disease, ssgcid, unknown function; NMR {Mycobacterium tuberculosis}
Probab=60.84 E-value=3.1 Score=27.35 Aligned_cols=15 Identities=27% Similarity=0.231 Sum_probs=13.8
Q ss_pred CCCCHHHHHHhhhhc
Q psy11267 88 RNVPDPVLKLVFPYL 102 (103)
Q Consensus 88 RNl~De~i~~ia~~~ 102 (103)
|.||||+++++++.|
T Consensus 37 r~Ltdeev~~Va~~L 51 (103)
T 2kvc_A 37 RRLSHDEVKAVANEL 51 (103)
T ss_dssp TTSCHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHH
Confidence 789999999999877
No 31
>3cu4_A Cytochrome C family protein; monoheme cytochrome, electron transport; HET: HEM; 1.30A {Geobacter sulfurreducens}
Probab=60.65 E-value=3.8 Score=23.90 Aligned_cols=18 Identities=11% Similarity=0.060 Sum_probs=14.8
Q ss_pred CCCC-CCCHHHHHHhhhhc
Q psy11267 85 PSPR-NVPDPVLKLVFPYL 102 (103)
Q Consensus 85 ~~~R-Nl~De~i~~ia~~~ 102 (103)
+... .|||+++++|++++
T Consensus 62 ~~~~~~ls~~ei~~l~~yi 80 (85)
T 3cu4_A 62 AFGEAMIPPADALKIGEYV 80 (85)
T ss_dssp CCCTTTSCHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHH
Confidence 3444 79999999999986
No 32
>3dmi_A Cytochrome C6; electron transport, transit peptide; HET: HEM; 1.50A {Phaeodactylum tricornutum} SCOP: a.3.1.1
Probab=60.25 E-value=5.1 Score=23.23 Aligned_cols=16 Identities=19% Similarity=0.264 Sum_probs=14.0
Q ss_pred CCCCCHHHHHHhhhhc
Q psy11267 87 PRNVPDPVLKLVFPYL 102 (103)
Q Consensus 87 ~RNl~De~i~~ia~~~ 102 (103)
...|||+++++|+++|
T Consensus 64 ~~~ls~~ei~~l~~yl 79 (88)
T 3dmi_A 64 GGRLSDEEIANVAAYV 79 (88)
T ss_dssp TTTSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH
Confidence 3479999999999987
No 33
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=59.87 E-value=33 Score=24.97 Aligned_cols=23 Identities=9% Similarity=0.163 Sum_probs=19.0
Q ss_pred HHHHHHHHHcCccEEeeccCCCC
Q psy11267 14 MAVLRMFYKLGVRYLTLTHACPT 36 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n~~n 36 (103)
....+.+++-|+|.+.+|++..+
T Consensus 49 ~~~a~al~~gGi~~iEvt~~t~~ 71 (232)
T 4e38_A 49 IPLGKVLAENGLPAAEITFRSDA 71 (232)
T ss_dssp HHHHHHHHHTTCCEEEEETTSTT
T ss_pred HHHHHHHHHCCCCEEEEeCCCCC
Confidence 55788889999999999998654
No 34
>1c75_A Cytochrome C-553; heme, bacillus pasteurii, AB initio, ATOM resolution, electron transport; HET: HEM; 0.97A {Sporosarcina pasteurii} SCOP: a.3.1.1 PDB: 1b7v_A* 1k3g_A* 1k3h_A* 1n9c_A*
Probab=59.76 E-value=4.1 Score=23.11 Aligned_cols=15 Identities=13% Similarity=0.058 Sum_probs=13.7
Q ss_pred CCCCHHHHHHhhhhc
Q psy11267 88 RNVPDPVLKLVFPYL 102 (103)
Q Consensus 88 RNl~De~i~~ia~~~ 102 (103)
..|||+++++|+++|
T Consensus 53 ~~ls~~ei~~l~~yl 67 (71)
T 1c75_A 53 GIAKGAEAEAVAAWL 67 (71)
T ss_dssp CSSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH
Confidence 679999999999986
No 35
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=59.67 E-value=5.3 Score=29.33 Aligned_cols=44 Identities=9% Similarity=-0.006 Sum_probs=30.2
Q ss_pred HHHHHHHHHcCccEEee--ccCC----CCchHHHHHHHHhcCCeeeccCCC
Q psy11267 14 MAVLRMFYKLGVRYLTL--THAC----PTPWYLVVRECNRLGMLIDLSHTS 58 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~l--t~n~----~n~~~~~i~~mn~lGmiiDlSH~s 58 (103)
++.|+.+.++|+|-+.+ .+.. +-.|-.+.+.++++|+.|.+ |+.
T Consensus 130 ~~el~~~~~~g~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~~lpv~i-H~~ 179 (334)
T 2hbv_A 130 CKEASRAVAAGHLGIQIGNHLGDKDLDDATLEAFLTHCANEDIPILV-HPW 179 (334)
T ss_dssp HHHHHHHHHHTCCCEEEESCBTTBCTTSHHHHHHHHHHHHTTCCEEE-ECC
T ss_pred HHHHHHHHHcCCeEEEECCCCCCCCCCcHHHHHHHHHHHHCCCEEEE-CCC
Confidence 46777777888887544 3221 11233899999999999987 665
No 36
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=59.55 E-value=23 Score=26.07 Aligned_cols=67 Identities=13% Similarity=0.232 Sum_probs=44.3
Q ss_pred CcHHHHHHHH-HcCccEEeeccC-----------CCCchHHHHHHHHhcCCeeeccCCCHHH---------------H--
Q psy11267 12 NSMAVLRMFY-KLGVRYLTLTHA-----------CPTPWYLVVRECNRLGMLIDLSHTSVQT---------------M-- 62 (103)
Q Consensus 12 ~~l~~l~~~y-~lGvR~i~lt~n-----------~~n~~~~~i~~mn~lGmiiDlSH~s~~t---------------~-- 62 (103)
..++.|+.+. ++|++-+-+.-+ .+..|-.+.+.++++|+.|.+ |.+... +
T Consensus 123 ~a~~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~~lpv~i-H~~~~~~~~~~~~~~~~~~~~~~a 201 (350)
T 2gwg_A 123 TCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVELEIPAMI-HVSTSCNTCFHTTGAHYLNADTTA 201 (350)
T ss_dssp GGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHHTCCEEE-CCCC---------TTHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHcCCeEEE-CCCCCCcccccccccccchHHHHH
Confidence 4567888887 678888866321 011233999999999999987 666421 1
Q ss_pred ------HHHHHhc-CCCEEEecCC
Q psy11267 63 ------RHVLNIS-SAPVIFSHSS 79 (103)
Q Consensus 63 ------~d~l~~s-~~Pvi~SHs~ 79 (103)
.++++.. +.++|+.|.+
T Consensus 202 ~~~li~~~v~~~~P~l~~vi~H~G 225 (350)
T 2gwg_A 202 FMQCVAGDLFKDFPELKFVIPHGG 225 (350)
T ss_dssp HHHHHHSCHHHHCTTCCEEESGGG
T ss_pred HHHHHhcCccccCCCCcEEeccCC
Confidence 1344443 4579999997
No 37
>2lky_A Uncharacterized protein; infectious disease, tuberculosis, DUF proteins, ssgcid, STRU genomics; NMR {Mycobacterium smegmatis str}
Probab=59.44 E-value=3.5 Score=27.52 Aligned_cols=15 Identities=20% Similarity=0.286 Sum_probs=14.0
Q ss_pred CCCCHHHHHHhhhhc
Q psy11267 88 RNVPDPVLKLVFPYL 102 (103)
Q Consensus 88 RNl~De~i~~ia~~~ 102 (103)
|.|||||++++++.|
T Consensus 39 r~Ltdeev~~Va~~L 53 (112)
T 2lky_A 39 RRLTNDEIKAIAEDL 53 (112)
T ss_dssp TTCCHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHH
Confidence 889999999999887
No 38
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=59.42 E-value=9.7 Score=27.79 Aligned_cols=44 Identities=14% Similarity=0.134 Sum_probs=31.3
Q ss_pred HHHHHHHH-HcCccEEee--ccCC----CCchHHHHHHHHhcCCeeeccCCC
Q psy11267 14 MAVLRMFY-KLGVRYLTL--THAC----PTPWYLVVRECNRLGMLIDLSHTS 58 (103)
Q Consensus 14 l~~l~~~y-~lGvR~i~l--t~n~----~n~~~~~i~~mn~lGmiiDlSH~s 58 (103)
++.|+.+. ++|+|-+.+ .+.. +..|-.+.+.++++|+.|.+ |..
T Consensus 126 ~~el~~~~~~~g~~Gv~l~~~~~~~~l~d~~~~~~~~~~~e~~lpv~i-H~~ 176 (336)
T 2wm1_A 126 VKEMERCVKELGFPGVQIGTHVNEWDLNAQELFPVYAAAERLKCSLFV-HPW 176 (336)
T ss_dssp HHHHHHHHHTSCCSEEEEESEETTEETTCGGGHHHHHHHHHHTCEEEE-ECC
T ss_pred HHHHHHHHHccCCeEEEECCcCCCCCCCCccHHHHHHHHHHcCCEEEE-CCC
Confidence 56777777 579998844 3321 22355999999999999987 665
No 39
>2m0n_A Putative uncharacterized protein; tuberculosis, structural genomics, seattle structural genomi for infectious disease, ssgcid; NMR {Mycobacterium abscessus}
Probab=59.40 E-value=4.8 Score=26.84 Aligned_cols=17 Identities=24% Similarity=0.307 Sum_probs=14.6
Q ss_pred CCCCCHHHHHHhhhhcC
Q psy11267 87 PRNVPDPVLKLVFPYLT 103 (103)
Q Consensus 87 ~RNl~De~i~~ia~~~~ 103 (103)
.|.|||||+++++..|.
T Consensus 38 ~R~LtdeEV~~Va~~L~ 54 (112)
T 2m0n_A 38 RRTLTEEQVQEVVAKLT 54 (112)
T ss_dssp CSSCCHHHHHHHHHHHT
T ss_pred hccCCHHHHHHHHHHHH
Confidence 57799999999998773
No 40
>2zxy_A Cytochrome C552, cytochrome C555; heme protein, oxygen binding, transport protein; HET: HEC; 1.15A {Aquifex aeolicus}
Probab=59.40 E-value=3.7 Score=23.70 Aligned_cols=16 Identities=19% Similarity=0.393 Sum_probs=14.1
Q ss_pred CCCCCHHHHHHhhhhc
Q psy11267 87 PRNVPDPVLKLVFPYL 102 (103)
Q Consensus 87 ~RNl~De~i~~ia~~~ 102 (103)
...|||+++++|+++|
T Consensus 68 ~~~ls~~ei~~l~~yl 83 (87)
T 2zxy_A 68 LKGLSDAELKALADFI 83 (87)
T ss_dssp GGGCCHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHH
Confidence 4579999999999986
No 41
>1a56_A C-551, ferricytochrome C-552; hemoprotein, prokaryotic electron transport; HET: HEC; NMR {Nitrosomonas europaea} SCOP: a.3.1.1 PDB: 1a8c_A*
Probab=59.36 E-value=3.4 Score=23.95 Aligned_cols=15 Identities=27% Similarity=0.317 Sum_probs=13.8
Q ss_pred CCCCHHHHHHhhhhc
Q psy11267 88 RNVPDPVLKLVFPYL 102 (103)
Q Consensus 88 RNl~De~i~~ia~~~ 102 (103)
..|||+++++|+++|
T Consensus 63 ~~Ls~~ei~~l~~yl 77 (81)
T 1a56_A 63 VNVSDADAKALADWI 77 (81)
T ss_dssp CSSSSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH
Confidence 689999999999986
No 42
>2exv_A Cytochrome C-551; alpha helix, heme C, electron transport; HET: HEC; 1.86A {Pseudomonas aeruginosa} PDB: 2pac_A* 351c_A* 451c_A* 1dvv_A*
Probab=58.68 E-value=4.6 Score=23.26 Aligned_cols=14 Identities=14% Similarity=0.226 Sum_probs=13.2
Q ss_pred CCCHHHHHHhhhhc
Q psy11267 89 NVPDPVLKLVFPYL 102 (103)
Q Consensus 89 Nl~De~i~~ia~~~ 102 (103)
.|||+++++|+++|
T Consensus 65 ~ls~~ei~~l~~yl 78 (82)
T 2exv_A 65 AVSDDEAQTLAKWV 78 (82)
T ss_dssp CCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 89999999999987
No 43
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=58.67 E-value=23 Score=26.73 Aligned_cols=93 Identities=15% Similarity=0.180 Sum_probs=59.0
Q ss_pred ccCCcHHHHHHHHHcCccEEeeccCC-----CC---chH--HHHHHHH-hcCCeeeccCC------------CHHHH---
Q psy11267 9 SLGNSMAVLRMFYKLGVRYLTLTHAC-----PT---PWY--LVVRECN-RLGMLIDLSHT------------SVQTM--- 62 (103)
Q Consensus 9 ~l~~~l~~l~~~y~lGvR~i~lt~n~-----~n---~~~--~~i~~mn-~lGmiiDlSH~------------s~~t~--- 62 (103)
.+++=...++.+.+.|-.-+.|+|-. ++ .+. ..+++.- .+-+++|-||. +.+.+
T Consensus 146 t~~ei~~ave~i~~~Gn~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~ 225 (285)
T 3sz8_A 146 SPTQLKHVVSKCGEVGNDRVMLCERGSSFGYDNLVVDMLGFRQMAETTGGCPVIFDVTHSLQCRDPLGDASGGRRRQVLD 225 (285)
T ss_dssp CGGGTHHHHHHHHHTTCCCEEEEECCEECSSSCEECCTTHHHHHHHHTTSCCEEEETTTTCC---------------HHH
T ss_pred CHHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCcCccCHHHHHHHHHhCCCCCEEEeCCCccccCCCcCCCCCCchhhHHH
Confidence 34433567788888898888887622 22 122 4455554 36678899998 53322
Q ss_pred --HHHHHhcCCC--EEEecCCc-cccCCCCCCCCHHHHHHhhhhc
Q psy11267 63 --RHVLNISSAP--VIFSHSSA-FALCPSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 63 --~d~l~~s~~P--vi~SHs~~-ral~~~~RNl~De~i~~ia~~~ 102 (103)
.-++. ..+- +|=.|-+. +++++|+-.++-++++.+.+.+
T Consensus 226 ~a~AAvA-~GA~gl~IE~H~~pd~al~D~~~sl~p~el~~lv~~i 269 (285)
T 3sz8_A 226 LARAGIA-VGIAGLFLEAHPDPDRARCDGPSALPLHQLEGLLSQM 269 (285)
T ss_dssp HHHHHHH-HCCSEEEEEEESCGGGCSCSSCCCEEGGGHHHHHHHH
T ss_pred HHHHHHH-hCCCEEEEEeccChhccCCchhhccCHHHHHHHHHHH
Confidence 22222 2444 88899665 8899999999999998877653
No 44
>1cc5_A Cytochrome C5; electron transport (heme protein); HET: HEM; 2.50A {Azotobacter vinelandii} SCOP: a.3.1.1
Probab=58.36 E-value=4.5 Score=24.14 Aligned_cols=14 Identities=21% Similarity=0.261 Sum_probs=12.9
Q ss_pred CCCHHHHHHhhhhc
Q psy11267 89 NVPDPVLKLVFPYL 102 (103)
Q Consensus 89 Nl~De~i~~ia~~~ 102 (103)
.|||+|+++|++++
T Consensus 67 ~Lsd~ei~~v~~yi 80 (83)
T 1cc5_A 67 DCSDDELKAAIGKM 80 (83)
T ss_dssp SCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 69999999999986
No 45
>3ph2_B Cytochrome C6; photosynthesis, cytochrome F, photosys thylakoid; HET: HEM; 1.40A {Phormidium laminosum} SCOP: a.3.1.1 PDB: 2v08_A* 1c6s_A*
Probab=58.11 E-value=4.5 Score=23.29 Aligned_cols=15 Identities=20% Similarity=0.355 Sum_probs=13.7
Q ss_pred CCCCHHHHHHhhhhc
Q psy11267 88 RNVPDPVLKLVFPYL 102 (103)
Q Consensus 88 RNl~De~i~~ia~~~ 102 (103)
..|||+++++|+++|
T Consensus 64 ~~ls~~ei~~l~~yl 78 (86)
T 3ph2_B 64 GRLTDDQIAAVAAYV 78 (86)
T ss_dssp TTSCHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHH
Confidence 579999999999987
No 46
>1cno_A Cytochrome C552; electron transport, pseudomonas nautica, X RAY structure, multiwavelength anomalous dispersion, heme; HET: HEC; 2.20A {Marinobacter hydrocarbonoclasticus} SCOP: a.3.1.1
Probab=57.63 E-value=5 Score=23.59 Aligned_cols=15 Identities=13% Similarity=0.242 Sum_probs=13.6
Q ss_pred CCCCHHHHHHhhhhc
Q psy11267 88 RNVPDPVLKLVFPYL 102 (103)
Q Consensus 88 RNl~De~i~~ia~~~ 102 (103)
..|||+++++|+++|
T Consensus 65 ~~ls~~ei~~l~~yl 79 (87)
T 1cno_A 65 TALSDADIANLAAYY 79 (87)
T ss_dssp TTCCHHHHHHHHHHH
T ss_pred hhCCHHHHHHHHHHH
Confidence 579999999999987
No 47
>1cch_A Cytochrome C551; electron transport; HET: HEM; NMR {Pseudomonas stutzeri} SCOP: a.3.1.1 PDB: 1fi3_A* 2i8f_A* 1cor_A*
Probab=57.24 E-value=4.9 Score=23.07 Aligned_cols=14 Identities=14% Similarity=0.301 Sum_probs=13.2
Q ss_pred CCCHHHHHHhhhhc
Q psy11267 89 NVPDPVLKLVFPYL 102 (103)
Q Consensus 89 Nl~De~i~~ia~~~ 102 (103)
.|||+++++|+++|
T Consensus 65 ~ls~~ei~~l~~yl 78 (82)
T 1cch_A 65 PVTEEEAKILAEWV 78 (82)
T ss_dssp SCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 89999999999987
No 48
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=56.70 E-value=14 Score=27.66 Aligned_cols=39 Identities=26% Similarity=0.273 Sum_probs=30.4
Q ss_pred HHHHHHHhcC--CeeeccCCC-HHHHHHHHHhcCCCEEEecC
Q psy11267 40 LVVRECNRLG--MLIDLSHTS-VQTMRHVLNISSAPVIFSHS 78 (103)
Q Consensus 40 ~~i~~mn~lG--miiDlSH~s-~~t~~d~l~~s~~Pvi~SHs 78 (103)
+++++.-+.| |+=|+|-.. +..+.+++..++.|+|+.|.
T Consensus 91 ~va~aAl~aGa~iINdvsg~~~d~~m~~~~a~~~~~vVlmh~ 132 (280)
T 1eye_A 91 DVARAALQNGAQMVNDVSGGRADPAMGPLLAEADVPWVLMHW 132 (280)
T ss_dssp HHHHHHHHTTCCEEEETTTTSSCTTHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHhCCeEEEEcC
Confidence 5666665655 777888764 66788888889999999997
No 49
>1ls9_A Cytochrome C6; omega loop, antiparallel beta-sheet, protoporphyrin IX containing Fe, heme, HAEM, electron transport; HET: HEM; 1.30A {Cladophora glomerata} SCOP: a.3.1.1
Probab=56.59 E-value=6.4 Score=23.14 Aligned_cols=17 Identities=12% Similarity=0.184 Sum_probs=14.4
Q ss_pred CCCCCCHHHHHHhhhhc
Q psy11267 86 SPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 86 ~~RNl~De~i~~ia~~~ 102 (103)
....|||+++++|+++|
T Consensus 66 ~~~~ls~~ei~~l~~yl 82 (91)
T 1ls9_A 66 WADRLDEDDIEAVSNYV 82 (91)
T ss_dssp CTTTSCHHHHHHHHHHH
T ss_pred hhhhCCHHHHHHHHHHH
Confidence 34579999999999987
No 50
>1wve_C 4-cresol dehydrogenase [hydroxylating] cytochrome C subunit; flavocytochrome, electron-transfer, FAD, heme, oxidoreductase; HET: FAD HEM; 1.85A {Pseudomonas putida} SCOP: a.3.1.1 PDB: 1diq_C* 1dii_C*
Probab=56.46 E-value=5.7 Score=23.20 Aligned_cols=15 Identities=40% Similarity=0.428 Sum_probs=13.7
Q ss_pred CCCCHHHHHHhhhhc
Q psy11267 88 RNVPDPVLKLVFPYL 102 (103)
Q Consensus 88 RNl~De~i~~ia~~~ 102 (103)
..|||+++++|+++|
T Consensus 56 ~~ls~~ei~~l~~yl 70 (80)
T 1wve_C 56 SYVDDESLTQVAEYL 70 (80)
T ss_dssp TTSCHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHH
Confidence 579999999999986
No 51
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=56.12 E-value=17 Score=27.77 Aligned_cols=52 Identities=12% Similarity=0.162 Sum_probs=41.2
Q ss_pred ccccccCCcHHHHHHHHHcCccEEeeccCCCCchHHHHHHHH-hcCCeeeccC
Q psy11267 5 EGGHSLGNSMAVLRMFYKLGVRYLTLTHACPTPWYLVVRECN-RLGMLIDLSH 56 (103)
Q Consensus 5 Eg~~~l~~~l~~l~~~y~lGvR~i~lt~n~~n~~~~~i~~mn-~lGmiiDlSH 56 (103)
.|..++.+-.+.++.+.+.|++++-+|-|..-.-.+.++++. ++|+-++-.+
T Consensus 26 ~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~ 78 (352)
T 3kc2_A 26 RGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQ 78 (352)
T ss_dssp ETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGG
T ss_pred cCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhh
Confidence 466788888889999999999999999876555667888887 5898665433
No 52
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=55.97 E-value=9.5 Score=28.54 Aligned_cols=87 Identities=16% Similarity=0.164 Sum_probs=56.9
Q ss_pred HHHHHHHHcCccEEeeccCCCCch-----H----HHHHHHHh---cCCeeeccCCCH------HHHHHHHHhcCCC--EE
Q psy11267 15 AVLRMFYKLGVRYLTLTHACPTPW-----Y----LVVRECNR---LGMLIDLSHTSV------QTMRHVLNISSAP--VI 74 (103)
Q Consensus 15 ~~l~~~y~lGvR~i~lt~n~~n~~-----~----~~i~~mn~---lGmiiDlSH~s~------~t~~d~l~~s~~P--vi 74 (103)
..++.+...|-..+.|.|-|...| - ..+..|.+ +-+++|.||..- ....-++. ..+- +|
T Consensus 163 ~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~~lpVi~dssH~~g~~~~~~~~~~aAva-~Ga~Gl~I 241 (276)
T 1vs1_A 163 AAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEATHLPVIVDPSHPAGRRSLVPALAKAGLA-AGADGLIV 241 (276)
T ss_dssp HHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHBSSCEEECCHHHHCSGGGHHHHHHHHHH-TTCSEEEE
T ss_pred HHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHhCCCEEEeCCCCCCccchHHHHHHHHHH-cCCCEEEE
Confidence 356677888988888888443222 1 44555554 455579999843 22222222 3455 88
Q ss_pred EecC-CccccCCCCCCCCHHHHHHhhhhc
Q psy11267 75 FSHS-SAFALCPSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 75 ~SHs-~~ral~~~~RNl~De~i~~ia~~~ 102 (103)
=+|- --+++++++=.++-++++.+.+.+
T Consensus 242 E~H~~~d~a~~D~~~sl~p~~~~~lv~~i 270 (276)
T 1vs1_A 242 EVHPNPEEALSDAKQQLTPGEFARLMGEL 270 (276)
T ss_dssp EBCSSGGGCSSCGGGCBCHHHHHHHHHHH
T ss_pred EecCCcccCCCchhcCCCHHHHHHHHHHH
Confidence 8994 456788999999999999887653
No 53
>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A*
Probab=55.96 E-value=21 Score=27.58 Aligned_cols=65 Identities=12% Similarity=0.118 Sum_probs=45.3
Q ss_pred CCcHHHHHHHHHc--CccEEeeccCCCCchHHHHHHHHhcCCeeeccCCCHHHHHHHHHhc-CCCEEEecC
Q psy11267 11 GNSMAVLRMFYKL--GVRYLTLTHACPTPWYLVVRECNRLGMLIDLSHTSVQTMRHVLNIS-SAPVIFSHS 78 (103)
Q Consensus 11 ~~~l~~l~~~y~l--GvR~i~lt~n~~n~~~~~i~~mn~lGmiiDlSH~s~~t~~d~l~~s-~~Pvi~SHs 78 (103)
..+++.++.|.+. ++|.++++=.... .++|+++.+.|+++-+-|.. .++.++.+.. ..-=.+||.
T Consensus 150 ~p~~~~~~~~~~~~~~i~~vTlAPE~~~--~~~i~~l~~~gi~vs~GHs~-A~~e~~~~a~~~Ga~~~THl 217 (381)
T 3iv8_A 150 PSDDTMIDTICANSDVIAKVTLAPENNK--PEHIEKLVKAGIVVSIGHTN-ATYSEARKSFESGITFATHL 217 (381)
T ss_dssp CCCHHHHHHHHHTTTSEEEEEECCTTSC--HHHHHHHHHTTCEEEECSBC-CCHHHHHHHHHTTCCEESST
T ss_pred CCCHHHHHHHHhccCCeEEEEECCCCCc--HHHHHHHHHCCCEEEecCCC-CCHHHHHHHHHcCCCEeeeC
Confidence 3567888888765 5898888776432 69999999999999999975 3555544432 122246675
No 54
>3dr0_A Cytochrome C6; photosynthesis, cyanobacteria, electron transfer electron transport, heme, iron, metal-binding, thylakoid; HET: HEM; 1.23A {Synechococcus SP}
Probab=55.54 E-value=4.8 Score=23.43 Aligned_cols=15 Identities=20% Similarity=0.335 Sum_probs=13.7
Q ss_pred CCCCHHHHHHhhhhc
Q psy11267 88 RNVPDPVLKLVFPYL 102 (103)
Q Consensus 88 RNl~De~i~~ia~~~ 102 (103)
..|||+++++|+++|
T Consensus 70 ~~ls~~ei~~l~~yl 84 (93)
T 3dr0_A 70 GRLSDADIANVAAYI 84 (93)
T ss_dssp TTBCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH
Confidence 679999999999987
No 55
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=55.34 E-value=51 Score=23.08 Aligned_cols=67 Identities=12% Similarity=0.070 Sum_probs=46.8
Q ss_pred HHHHHHHHcCccEEeeccCC-CCchHHHHHHHHhcCCeeeccCC---------CH-------HHHHHHHHhc---CCCEE
Q psy11267 15 AVLRMFYKLGVRYLTLTHAC-PTPWYLVVRECNRLGMLIDLSHT---------SV-------QTMRHVLNIS---SAPVI 74 (103)
Q Consensus 15 ~~l~~~y~lGvR~i~lt~n~-~n~~~~~i~~mn~lGmiiDlSH~---------s~-------~t~~d~l~~s---~~Pvi 74 (103)
+.++...++|+..+.+.... ...+.++-+.+.+.|+-+-.-|. .+ +.+.++++.+ ..|.|
T Consensus 42 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v 121 (287)
T 3kws_A 42 EKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGV 121 (287)
T ss_dssp HHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 57899999999999998863 22344888888999998754333 22 2344444444 79989
Q ss_pred EecCCcc
Q psy11267 75 FSHSSAF 81 (103)
Q Consensus 75 ~SHs~~r 81 (103)
..|++..
T Consensus 122 ~~~~g~~ 128 (287)
T 3kws_A 122 IIVPAFN 128 (287)
T ss_dssp EECSCCT
T ss_pred EEecCcC
Confidence 8898743
No 56
>1mz4_A Cytochrome C550; PSII associated cytochrome, electron transport; HET: HEM; 1.80A {Thermosynechococcus elongatus} SCOP: a.3.1.1 PDB: 1izl_V* 1s5l_V* 2axt_V* 3a0b_V* 3a0h_V* 3arc_V* 3bz1_V* 3bz2_V* 3kzi_V* 3prq_V* 3prr_V*
Probab=54.81 E-value=5.7 Score=25.55 Aligned_cols=15 Identities=20% Similarity=0.235 Sum_probs=13.6
Q ss_pred CCCCHHHHHHhhhhc
Q psy11267 88 RNVPDPVLKLVFPYL 102 (103)
Q Consensus 88 RNl~De~i~~ia~~~ 102 (103)
++|||+++++|+++|
T Consensus 105 ~~Lsd~ei~alaaYl 119 (137)
T 1mz4_A 105 RNLTEKDLVAIAGHI 119 (137)
T ss_dssp TTCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH
Confidence 569999999999987
No 57
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=54.71 E-value=58 Score=23.59 Aligned_cols=77 Identities=18% Similarity=0.210 Sum_probs=51.4
Q ss_pred HHHHHHHHHcCccEEeeccCC---------------CCchHHHHHHHHhcCCeeeccCCCHHHHHHHHHhcCCCEEEecC
Q psy11267 14 MAVLRMFYKLGVRYLTLTHAC---------------PTPWYLVVRECNRLGMLIDLSHTSVQTMRHVLNISSAPVIFSHS 78 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n~---------------~n~~~~~i~~mn~lGmiiDlSH~s~~t~~d~l~~s~~Pvi~SHs 78 (103)
...++.+.+.|+..+.+.-.+ ...+.+++++..+.|+.+-+=-.+..++.++++.- +-.+.|.
T Consensus 170 ~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i~~~~~~g--~~~i~H~ 247 (403)
T 3gnh_A 170 RKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAHGASGIREAVRAG--VDTIEHA 247 (403)
T ss_dssp HHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHTT--CSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhC--CCEEecC
Confidence 456777888898777665321 01122888999999999986334667777777752 2345565
Q ss_pred CccccCCCCCCCCHHHHHHhhhh
Q psy11267 79 SAFALCPSPRNVPDPVLKLVFPY 101 (103)
Q Consensus 79 ~~ral~~~~RNl~De~i~~ia~~ 101 (103)
. .+++++++.++++
T Consensus 248 ~---------~~~~~~~~~~~~~ 261 (403)
T 3gnh_A 248 S---------LVDDEGIKLAVQK 261 (403)
T ss_dssp T---------TCCHHHHHHHHHH
T ss_pred C---------cCCHHHHHHHHHC
Confidence 5 4688999888764
No 58
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1
Probab=54.60 E-value=42 Score=24.72 Aligned_cols=86 Identities=7% Similarity=-0.071 Sum_probs=48.1
Q ss_pred cCCcHHHHHHHHHcC-ccEEeeccCCCCchHHHHHHHHhcCCeeec-----cCC-CHHHHHHHHHhcCCCEEEecCCccc
Q psy11267 10 LGNSMAVLRMFYKLG-VRYLTLTHACPTPWYLVVRECNRLGMLIDL-----SHT-SVQTMRHVLNISSAPVIFSHSSAFA 82 (103)
Q Consensus 10 l~~~l~~l~~~y~lG-vR~i~lt~n~~n~~~~~i~~mn~lGmiiDl-----SH~-s~~t~~d~l~~s~~Pvi~SHs~~ra 82 (103)
+.+-++.|+.+++.| +|++|++-.....+.++++. .++..++ +=. .+..+.+.++..+.+|++--.-+++
T Consensus 137 ~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~---~~~~p~v~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~G 213 (296)
T 1mzr_A 137 YVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDE---TGVTPVINQIELHPLMQQRQLHAWNATHKIQTESWSPLAQG 213 (296)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHH---HSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTTTT
T ss_pred HHHHHHHHHHHHHCCCcCEEEEeCCCHHHHHHHHHh---cCCCceEEeeecccccCCHHHHHHHHHCCCeEEEeccccCC
Confidence 334467888899999 89999985432222233332 2332111 111 1234666666667777665444443
Q ss_pred cCCCCCCCCHHHHHHhhhh
Q psy11267 83 LCPSPRNVPDPVLKLVFPY 101 (103)
Q Consensus 83 l~~~~RNl~De~i~~ia~~ 101 (103)
. .+-+.++.++.||++
T Consensus 214 ~---~~~l~~~~l~~ia~~ 229 (296)
T 1mzr_A 214 G---KGVFDQKVIRDLADK 229 (296)
T ss_dssp C---TTTTTSHHHHHHHHH
T ss_pred c---chhcChHHHHHHHHH
Confidence 2 134667888888875
No 59
>1f1f_A Cytochrome C6; heme, protein structure, cyanobacteria, photosynthesis, electron transport; HET: HEM; 2.70A {Arthrospira maxima} SCOP: a.3.1.1 PDB: 1kib_A*
Probab=54.18 E-value=7.4 Score=22.54 Aligned_cols=16 Identities=13% Similarity=0.150 Sum_probs=14.0
Q ss_pred CCCCCHHHHHHhhhhc
Q psy11267 87 PRNVPDPVLKLVFPYL 102 (103)
Q Consensus 87 ~RNl~De~i~~ia~~~ 102 (103)
...|||+++++|+++|
T Consensus 66 ~~~ls~~ei~~l~~yl 81 (89)
T 1f1f_A 66 NGRLSPLQIEDVAAYV 81 (89)
T ss_dssp TTTSCHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHH
Confidence 3579999999999987
No 60
>1gdv_A Cytochrome C6; RED ALGA, electron transport; HET: HEM; 1.57A {Porphyra yezoensis} SCOP: a.3.1.1 PDB: 2zbo_A*
Probab=54.05 E-value=5.8 Score=22.75 Aligned_cols=16 Identities=13% Similarity=0.117 Sum_probs=13.9
Q ss_pred CCCCCHHHHHHhhhhc
Q psy11267 87 PRNVPDPVLKLVFPYL 102 (103)
Q Consensus 87 ~RNl~De~i~~ia~~~ 102 (103)
...|||+++++|+++|
T Consensus 62 ~~~ls~~ei~~l~~yl 77 (85)
T 1gdv_A 62 GGRLVDEDIEDAANYV 77 (85)
T ss_dssp TTTSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH
Confidence 3489999999999987
No 61
>1cyi_A Cytochrome C6, cytochrome C553; photosynthesis, electron transport protein (cytochrome); HET: HEM; 1.90A {Chlamydomonas reinhardtii} SCOP: a.3.1.1 PDB: 1cyj_A*
Probab=53.97 E-value=7.5 Score=22.70 Aligned_cols=16 Identities=13% Similarity=0.337 Sum_probs=14.0
Q ss_pred CCCCCHHHHHHhhhhc
Q psy11267 87 PRNVPDPVLKLVFPYL 102 (103)
Q Consensus 87 ~RNl~De~i~~ia~~~ 102 (103)
...|||+++++|+++|
T Consensus 64 ~~~ls~~ei~~l~~yl 79 (90)
T 1cyi_A 64 ADRLSEEEIQAVAEYV 79 (90)
T ss_dssp TTTSCHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHH
Confidence 3579999999999986
No 62
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=53.70 E-value=4.8 Score=30.95 Aligned_cols=39 Identities=18% Similarity=0.165 Sum_probs=32.2
Q ss_pred HHHHHHHhcC--CeeeccCCCHHHHHHHHHhcCCCEEEecC
Q psy11267 40 LVVRECNRLG--MLIDLSHTSVQTMRHVLNISSAPVIFSHS 78 (103)
Q Consensus 40 ~~i~~mn~lG--miiDlSH~s~~t~~d~l~~s~~Pvi~SHs 78 (103)
+++++.-+.| |+=|+|-..+..+.+++..++.|+|+.|.
T Consensus 128 ~VaeaAl~aGa~iINDVsg~~d~~m~~vaa~~g~~vVlmh~ 168 (318)
T 2vp8_A 128 QVAKAACAAGADLINDTWGGVDPAMPEVAAEFGAGLVCAHT 168 (318)
T ss_dssp HHHHHHHHHTCCEEEETTSSSSTTHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHhCCCEEEECCCCCchHHHHHHHHhCCCEEEECC
Confidence 5666665544 78899988888889999999999999996
No 63
>3dp5_A OMCF, cytochrome C family protein; C-type cytochrome, Fe SAD phasing, dissimilatory metal reduction, electron transport; HET: HEM; 1.86A {Geobacter sulfurreducens} SCOP: a.3.1.0
Probab=52.39 E-value=6.2 Score=24.17 Aligned_cols=14 Identities=14% Similarity=0.164 Sum_probs=13.0
Q ss_pred CCCHHHHHHhhhhc
Q psy11267 89 NVPDPVLKLVFPYL 102 (103)
Q Consensus 89 Nl~De~i~~ia~~~ 102 (103)
.|||+++++|++|+
T Consensus 81 ~Lsd~ei~~l~~Yi 94 (99)
T 3dp5_A 81 MIPPADALKIGEYV 94 (99)
T ss_dssp TSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 69999999999986
No 64
>3ol3_A Putative uncharacterized protein; tuberculosis, RV0543C, ortholog, iodide ION S phasing, structural genomics; HET: PG4 PGE; 1.95A {Mycobacterium smegmatis} PDB: 3ol4_A
Probab=52.22 E-value=7.2 Score=25.72 Aligned_cols=16 Identities=6% Similarity=0.067 Sum_probs=13.9
Q ss_pred CCCCCHHHHHHhhhhc
Q psy11267 87 PRNVPDPVLKLVFPYL 102 (103)
Q Consensus 87 ~RNl~De~i~~ia~~~ 102 (103)
.|.|||||+++++..|
T Consensus 41 ~R~Ltddev~~Va~~L 56 (107)
T 3ol3_A 41 KRSLTEDEVVRAAQAI 56 (107)
T ss_dssp TCCCCHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHH
Confidence 4679999999999876
No 65
>2ce0_A Cytochrome C6; chloroplast, electron transport, heme, iron, thylakoid, photosynthesis, metal-binding, electron transfer; HET: HEC; 1.24A {Arabidopsis thaliana} PDB: 2ce1_A* 2dge_A* 2v07_A*
Probab=52.00 E-value=8.7 Score=23.01 Aligned_cols=19 Identities=21% Similarity=0.464 Sum_probs=15.4
Q ss_pred CCCCCCCCHHHHHHhhhhc
Q psy11267 84 CPSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 84 ~~~~RNl~De~i~~ia~~~ 102 (103)
......|||+++++|+++|
T Consensus 73 ~~~~~~ls~~ei~~l~~yl 91 (105)
T 2ce0_A 73 CTFGPRLQDEEIKLLAEFV 91 (105)
T ss_dssp BCSSCCBCHHHHHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHHH
Confidence 3334689999999999987
No 66
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=51.98 E-value=54 Score=22.44 Aligned_cols=67 Identities=6% Similarity=-0.001 Sum_probs=45.1
Q ss_pred HHHHHHHHHcCccEEeec-cCC------CCchHHHHHHHHhcCCeeeccCC-------CH-------HHHHHHHHhc---
Q psy11267 14 MAVLRMFYKLGVRYLTLT-HAC------PTPWYLVVRECNRLGMLIDLSHT-------SV-------QTMRHVLNIS--- 69 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt-~n~------~n~~~~~i~~mn~lGmiiDlSH~-------s~-------~t~~d~l~~s--- 69 (103)
.+.++...++|+..+.+. ... .....++-+.+.+.|+-+-.-|. .+ +.+.++++.+
T Consensus 17 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l 96 (278)
T 1i60_A 17 KLDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTL 96 (278)
T ss_dssp HHHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCeeeeccccccccCCHHHHHHHHHHHHHHHHHHHHc
Confidence 357889999999999998 432 23344888888999987653332 32 2344455444
Q ss_pred CCCEEEecCCc
Q psy11267 70 SAPVIFSHSSA 80 (103)
Q Consensus 70 ~~Pvi~SHs~~ 80 (103)
..|.|..|++.
T Consensus 97 G~~~v~~~~g~ 107 (278)
T 1i60_A 97 GVKYVVAVPLV 107 (278)
T ss_dssp TCCEEEEECCB
T ss_pred CCCEEEEecCC
Confidence 68888888764
No 67
>1c6r_A Cytochrome C6; electron transport protein, reduced state, photosynthesis; HET: HEM; 1.90A {Scenedesmus obliquus} SCOP: a.3.1.1 PDB: 1c6o_A* 1a2s_A* 1ced_A* 1ctj_A*
Probab=51.71 E-value=6.6 Score=22.83 Aligned_cols=16 Identities=19% Similarity=0.320 Sum_probs=14.0
Q ss_pred CCCCCHHHHHHhhhhc
Q psy11267 87 PRNVPDPVLKLVFPYL 102 (103)
Q Consensus 87 ~RNl~De~i~~ia~~~ 102 (103)
...|||+++++|+++|
T Consensus 65 ~~~ls~~ei~~l~~yl 80 (89)
T 1c6r_A 65 SGTLDDDEIAAVAAYV 80 (89)
T ss_dssp TTTSCHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHH
Confidence 3479999999999987
No 68
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=51.52 E-value=58 Score=24.12 Aligned_cols=76 Identities=12% Similarity=0.151 Sum_probs=50.9
Q ss_pred HHHHHHHHcCccEEeeccCC---------------CCchHHHHHHHHhcCCeeeccCCCHHHHHHHHHhcCCCEEEecCC
Q psy11267 15 AVLRMFYKLGVRYLTLTHAC---------------PTPWYLVVRECNRLGMLIDLSHTSVQTMRHVLNISSAPVIFSHSS 79 (103)
Q Consensus 15 ~~l~~~y~lGvR~i~lt~n~---------------~n~~~~~i~~mn~lGmiiDlSH~s~~t~~d~l~~s~~Pvi~SHs~ 79 (103)
..++...+.|+..+.+.-.+ ...+.+++++..+.|+.+.+=..+.....++++.- .. .+.|..
T Consensus 179 ~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i~~al~~G-~~-~i~H~~ 256 (426)
T 2r8c_A 179 RAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGRGTYVLAHAYTPAAIARAVRCG-VR-TIEHGN 256 (426)
T ss_dssp HHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHTTCCEEEEECSHHHHHHHHHTT-CS-EEEECT
T ss_pred HHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHcC-CC-EEecCC
Confidence 35666777888777654321 01122888999999999988666777788888743 22 355654
Q ss_pred ccccCCCCCCCCHHHHHHhhhh
Q psy11267 80 AFALCPSPRNVPDPVLKLVFPY 101 (103)
Q Consensus 80 ~ral~~~~RNl~De~i~~ia~~ 101 (103)
.+++++++.+++.
T Consensus 257 ---------~~~~~~~~~~~~~ 269 (426)
T 2r8c_A 257 ---------LIDDETARLVAEH 269 (426)
T ss_dssp ---------TCCHHHHHHHHHT
T ss_pred ---------cCCHHHHHHHHHc
Confidence 4678888888764
No 69
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=51.36 E-value=59 Score=22.66 Aligned_cols=64 Identities=14% Similarity=0.008 Sum_probs=46.0
Q ss_pred HHHHHHHHcCccEEeeccCCCCchHHHHHHHHhcCCeeeccCCC-----------HHHHHHHHHhc---CCCEEEecCC
Q psy11267 15 AVLRMFYKLGVRYLTLTHACPTPWYLVVRECNRLGMLIDLSHTS-----------VQTMRHVLNIS---SAPVIFSHSS 79 (103)
Q Consensus 15 ~~l~~~y~lGvR~i~lt~n~~n~~~~~i~~mn~lGmiiDlSH~s-----------~~t~~d~l~~s---~~Pvi~SHs~ 79 (103)
+.++...++|+..+.+.+... ...++-+.+.+.|+-+-..|.+ .+.+..+++.+ ..|.|..|++
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~~ 112 (301)
T 3cny_A 35 QLLSDIVVAGFQGTEVGGFFP-GPEKLNYELKLRNLEIAGQWFSSYIIRDGIEKASEAFEKHCQYLKAINAPVAVVSEQ 112 (301)
T ss_dssp HHHHHHHHHTCCEECCCTTCC-CHHHHHHHHHHTTCEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHhCCCEEEecCCCC-CHHHHHHHHHHCCCeEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecCC
Confidence 478889999999999986544 4558888889999987665542 12344444444 7898888874
No 70
>1e29_A Cytochrome C549; electron transport, PSII associated cytochrome, low potential, BIS_histidinyl, PSII modulator; HET: HEC; 1.21A {Synechocystis SP} SCOP: a.3.1.1
Probab=50.75 E-value=7.1 Score=25.48 Aligned_cols=15 Identities=27% Similarity=0.182 Sum_probs=13.7
Q ss_pred CCCCHHHHHHhhhhc
Q psy11267 88 RNVPDPVLKLVFPYL 102 (103)
Q Consensus 88 RNl~De~i~~ia~~~ 102 (103)
+.|||+++++|++||
T Consensus 105 ~~Lsd~ei~~laaYl 119 (135)
T 1e29_A 105 RNYTEDDIFDVAGYT 119 (135)
T ss_dssp TTCCHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHH
Confidence 579999999999987
No 71
>2zon_G Cytochrome C551; nitrite, electron transfer, denitrification, oxidoreductase/electron transport complex; HET: HEM; 1.70A {Achromobacter xylosoxidans}
Probab=50.36 E-value=7.4 Score=22.68 Aligned_cols=14 Identities=14% Similarity=0.446 Sum_probs=13.1
Q ss_pred CCCHHHHHHhhhhc
Q psy11267 89 NVPDPVLKLVFPYL 102 (103)
Q Consensus 89 Nl~De~i~~ia~~~ 102 (103)
.|||++++.|+++|
T Consensus 69 ~ls~~ei~~l~~yl 82 (87)
T 2zon_G 69 AADEATLRAAVAYM 82 (87)
T ss_dssp CCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 79999999999986
No 72
>1w5c_T Cytochrome C-550; photosynthesis, water oxidation, photosystem, membrane protein; HET: CL1 CLA PHO HEM HEC BCR; 3.2A {Thermosynechococcus elongatus} SCOP: i.5.1.1
Probab=49.75 E-value=7.5 Score=25.90 Aligned_cols=15 Identities=20% Similarity=0.235 Sum_probs=13.8
Q ss_pred CCCCHHHHHHhhhhc
Q psy11267 88 RNVPDPVLKLVFPYL 102 (103)
Q Consensus 88 RNl~De~i~~ia~~~ 102 (103)
+.|||+++++|++++
T Consensus 131 ~~Lsd~ei~~laaYl 145 (163)
T 1w5c_T 131 RNLTEKDLVAIAGHI 145 (163)
T ss_dssp TTCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH
Confidence 689999999999986
No 73
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=49.62 E-value=17 Score=27.87 Aligned_cols=40 Identities=23% Similarity=0.288 Sum_probs=32.7
Q ss_pred HHHHHHHhcC--CeeeccCCCHHHHHHHHHhcCCCEEEecCC
Q psy11267 40 LVVRECNRLG--MLIDLSHTSVQTMRHVLNISSAPVIFSHSS 79 (103)
Q Consensus 40 ~~i~~mn~lG--miiDlSH~s~~t~~d~l~~s~~Pvi~SHs~ 79 (103)
+++++.-+.| |+=|+|-..+..+.+++..++.|||+.|..
T Consensus 116 ~Va~aAl~aGa~iINDVsg~~~~~m~~v~a~~g~~vVlMh~~ 157 (314)
T 3tr9_A 116 RVMREAVNTGADMINDQRALQLDDALTTVSALKTPVCLMHFP 157 (314)
T ss_dssp HHHHHHHHHTCCEEEETTTTCSTTHHHHHHHHTCCEEEECCC
T ss_pred HHHHHHHHcCCCEEEECCCCCchHHHHHHHHhCCeEEEECCC
Confidence 6666665555 888999988778888999999999999964
No 74
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=49.49 E-value=21 Score=26.95 Aligned_cols=40 Identities=20% Similarity=0.253 Sum_probs=32.4
Q ss_pred HHHHHHHhcC--CeeeccCCCHHHHHHHHHhcCCCEEEecCC
Q psy11267 40 LVVRECNRLG--MLIDLSHTSVQTMRHVLNISSAPVIFSHSS 79 (103)
Q Consensus 40 ~~i~~mn~lG--miiDlSH~s~~t~~d~l~~s~~Pvi~SHs~ 79 (103)
+++++.-+.| |+=|+|-..+..+.+++..++.|+|+.|..
T Consensus 114 ~Va~aAl~aGa~iINdVsg~~d~~m~~v~a~~~~~vVlmh~~ 155 (294)
T 2dqw_A 114 EVAEEALKLGAHLLNDVTGLRDERMVALAARHGVAAVVMHMP 155 (294)
T ss_dssp HHHHHHHHHTCSEEECSSCSCCHHHHHHHHHHTCEEEEECCS
T ss_pred HHHHHHHHhCCCEEEECCCCCChHHHHHHHHhCCCEEEEcCC
Confidence 5666655544 777999888888999999999999999973
No 75
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=48.91 E-value=12 Score=28.36 Aligned_cols=39 Identities=13% Similarity=0.082 Sum_probs=31.2
Q ss_pred HHHHHHHhcC--CeeeccCCCHHHHHHHHHhcCCCEEEecC
Q psy11267 40 LVVRECNRLG--MLIDLSHTSVQTMRHVLNISSAPVIFSHS 78 (103)
Q Consensus 40 ~~i~~mn~lG--miiDlSH~s~~t~~d~l~~s~~Pvi~SHs 78 (103)
+++++.-+.| |+=|+|-..+..+.+++..++.|+|+.|.
T Consensus 108 ~Va~aAl~aGa~iINdVsg~~d~~m~~~~a~~~~~vVlmh~ 148 (294)
T 2y5s_A 108 AVMRAALAAGADLINDIWGFRQPGAIDAVRDGNSGLCAMHM 148 (294)
T ss_dssp HHHHHHHHHTCSEEEETTTTCSTTHHHHHSSSSCEEEEECC
T ss_pred HHHHHHHHcCCCEEEECCCCCchHHHHHHHHhCCCEEEECC
Confidence 5666665545 77799988777788888889999999998
No 76
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=47.97 E-value=31 Score=23.98 Aligned_cols=47 Identities=11% Similarity=0.244 Sum_probs=36.7
Q ss_pred cccccCCcHHHHHHHHHcCccEEeeccCCCCchHHHHHHHHhcCCee
Q psy11267 6 GGHSLGNSMAVLRMFYKLGVRYLTLTHACPTPWYLVVRECNRLGMLI 52 (103)
Q Consensus 6 g~~~l~~~l~~l~~~y~lGvR~i~lt~n~~n~~~~~i~~mn~lGmii 52 (103)
|...+.+..+.++.+.+.|++.+-.|-+......++.+++.++|+-+
T Consensus 15 ~~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~ 61 (263)
T 1zjj_A 15 GNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDV 61 (263)
T ss_dssp TTEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCC
T ss_pred CCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 44456667889999999999999999876656667888888888743
No 77
>2zzs_A Cytochrome C554; C-type cytochrome, electron transport; HET: HEC; 1.80A {Vibrio parahaemolyticus}
Probab=47.68 E-value=8.9 Score=23.07 Aligned_cols=15 Identities=13% Similarity=0.160 Sum_probs=13.7
Q ss_pred CCCCHHHHHHhhhhc
Q psy11267 88 RNVPDPVLKLVFPYL 102 (103)
Q Consensus 88 RNl~De~i~~ia~~~ 102 (103)
..+||+++++|++++
T Consensus 85 ~~ls~~ei~~l~~yl 99 (103)
T 2zzs_A 85 SLLSDDDIANLAAYY 99 (103)
T ss_dssp TTCCHHHHHHHHHHH
T ss_pred hhCCHHHHHHHHHHH
Confidence 579999999999986
No 78
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=47.12 E-value=62 Score=23.41 Aligned_cols=80 Identities=16% Similarity=0.156 Sum_probs=47.3
Q ss_pred cHHHHHHHHHcCccEEeeccCC----CCchHHHHHHHHhcCCeeeccCCC--------HHHHHHHHHhcCCCEEEecCCc
Q psy11267 13 SMAVLRMFYKLGVRYLTLTHAC----PTPWYLVVRECNRLGMLIDLSHTS--------VQTMRHVLNISSAPVIFSHSSA 80 (103)
Q Consensus 13 ~l~~l~~~y~lGvR~i~lt~n~----~n~~~~~i~~mn~lGmiiDlSH~s--------~~t~~d~l~~s~~Pvi~SHs~~ 80 (103)
+.+.++.+++.|...+.+.-.. ...+.++++...+.|+.+. .|+. ...+..+++. ... .++|.+.
T Consensus 147 ~~~~~~~~~~~g~~~ik~~~~~~~~~~~~l~~~~~~a~~~g~~v~-~H~~~~~~~~~~~~~i~~~~~~-G~~-~i~H~~~ 223 (386)
T 2vun_A 147 TEEDFIEMKKEGVWIVGEVGLGTIKNPEDAAPMVEWAHKHGFKVQ-MHTGGTSIPGSSTVTADDVIKT-KPD-VVSHING 223 (386)
T ss_dssp CHHHHHHHHHTTCCEEEEETSSSCCSHHHHHHHHHHHHHTTCEEE-EECSCCSCSTTCSCCHHHHHHH-CCS-EEETTTC
T ss_pred CHHHHHHHHHhCCCeEEEeecCCCCCHHHHHHHHHHHHHCCCeEE-EecCCccccccCHHHHHHHHHc-CCC-EEEEccC
Confidence 3467777788776655432111 1122377777888899888 7884 2344555543 333 4677543
Q ss_pred cccCCCCCCCCHHHHHHhhh
Q psy11267 81 FALCPSPRNVPDPVLKLVFP 100 (103)
Q Consensus 81 ral~~~~RNl~De~i~~ia~ 100 (103)
+ +..++++.++.+++
T Consensus 224 ~-----~~~~~~~~~~~~~~ 238 (386)
T 2vun_A 224 G-----PTAISVQEVDRIMD 238 (386)
T ss_dssp S-----SSCCCHHHHHHHHH
T ss_pred C-----CCCCCHHHHHHHHH
Confidence 2 12367888888765
No 79
>1w2l_A Cytochrome oxidase subunit II; cytochrome C domain, oxidoreductase; HET: HEM; 1.3A {Rhodothermus marinus}
Probab=46.73 E-value=8.4 Score=22.76 Aligned_cols=16 Identities=0% Similarity=0.204 Sum_probs=14.1
Q ss_pred CCCCCHHHHHHhhhhc
Q psy11267 87 PRNVPDPVLKLVFPYL 102 (103)
Q Consensus 87 ~RNl~De~i~~ia~~~ 102 (103)
...|||+++++|+++|
T Consensus 80 ~~~ls~~ei~~l~~yl 95 (99)
T 1w2l_A 80 YASLSEREVAALIEFI 95 (99)
T ss_dssp GGGCCHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHH
Confidence 4579999999999987
No 80
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=46.22 E-value=48 Score=23.74 Aligned_cols=65 Identities=15% Similarity=0.332 Sum_probs=44.0
Q ss_pred HHHHHHHcCccEEeeccCCCCch----------HHHHHHHHhcCCeeeccCCC-------------H-------HHHHHH
Q psy11267 16 VLRMFYKLGVRYLTLTHACPTPW----------YLVVRECNRLGMLIDLSHTS-------------V-------QTMRHV 65 (103)
Q Consensus 16 ~l~~~y~lGvR~i~lt~n~~n~~----------~~~i~~mn~lGmiiDlSH~s-------------~-------~t~~d~ 65 (103)
.++...++|...+.+......++ .++-+.+.+.|+-+-..|.+ + +.+.++
T Consensus 40 ~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~i~~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~ 119 (316)
T 3qxb_A 40 AGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRKAGLTIESTFGGLASYTYNHFLAPTLELQSLGYQHLKRA 119 (316)
T ss_dssp HHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHTSCBTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHHcCCeEEEeeccccccccccCCCCCHHHHHHHHHHHHHH
Confidence 45666899999999988655544 16777788999977543332 2 124445
Q ss_pred HHhc---CCCEEEecCCc
Q psy11267 66 LNIS---SAPVIFSHSSA 80 (103)
Q Consensus 66 l~~s---~~Pvi~SHs~~ 80 (103)
++.+ ..|+|..|.+.
T Consensus 120 i~~A~~lGa~~v~~~~g~ 137 (316)
T 3qxb_A 120 IDMTAAMEVPATGMPFGS 137 (316)
T ss_dssp HHHHHHTTCCEEEECCBB
T ss_pred HHHHHHcCCCEEEecCCC
Confidence 5554 68999888764
No 81
>1f1c_A Cytochrome C549; dimeric cytochrome, electron transport; HET: HEM; 2.30A {Arthrospira maxima} SCOP: a.3.1.1
Probab=45.50 E-value=9.6 Score=23.79 Aligned_cols=15 Identities=33% Similarity=0.448 Sum_probs=13.8
Q ss_pred CCCCHHHHHHhhhhc
Q psy11267 88 RNVPDPVLKLVFPYL 102 (103)
Q Consensus 88 RNl~De~i~~ia~~~ 102 (103)
..|||+++++|+++|
T Consensus 103 ~~Ls~~ei~~l~~Yl 117 (129)
T 1f1c_A 103 RNISEDDLYNVAGYI 117 (129)
T ss_dssp SSCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH
Confidence 589999999999987
No 82
>2l4d_A SCO1/SENC family protein/cytochrome C; electron transfer, electron transport; HET: HEC; NMR {Pseudomonas putida}
Probab=43.36 E-value=10 Score=22.86 Aligned_cols=14 Identities=21% Similarity=0.460 Sum_probs=12.8
Q ss_pred CCCHHHHHHhhhhc
Q psy11267 89 NVPDPVLKLVFPYL 102 (103)
Q Consensus 89 Nl~De~i~~ia~~~ 102 (103)
.|||+++++|+++|
T Consensus 80 ~Ls~~ei~~l~~yl 93 (110)
T 2l4d_A 80 RLGDAEVSALISYL 93 (110)
T ss_dssp CCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 49999999999987
No 83
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A*
Probab=42.74 E-value=86 Score=22.57 Aligned_cols=86 Identities=6% Similarity=-0.036 Sum_probs=48.0
Q ss_pred cCCcHHHHHHHHHcC-ccEEeeccCCCCchHHHHHHHHhcCCeeecc----CC--CHHHHHHHHHhcCCCEEEecCCccc
Q psy11267 10 LGNSMAVLRMFYKLG-VRYLTLTHACPTPWYLVVRECNRLGMLIDLS----HT--SVQTMRHVLNISSAPVIFSHSSAFA 82 (103)
Q Consensus 10 l~~~l~~l~~~y~lG-vR~i~lt~n~~n~~~~~i~~mn~lGmiiDlS----H~--s~~t~~d~l~~s~~Pvi~SHs~~ra 82 (103)
+..-++.|+.+++.| +|++|++-.....+.++++. .++..++- |. ....+.+.++..+.+|++--.-+++
T Consensus 117 ~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~---~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G 193 (278)
T 1hw6_A 117 YVHAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAA---TGVVPAVNQIELHPAYQQREITDWAAAHDVKIESWGPLGQG 193 (278)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHH---HSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTGGG
T ss_pred HHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHh---cCCCceeEEEEeCcccCCHHHHHHHHHcCCEEEEeccccCC
Confidence 334466888899999 89999975432111133322 23322211 11 1234666666667777665444443
Q ss_pred cCCCCCCCCHHHHHHhhhh
Q psy11267 83 LCPSPRNVPDPVLKLVFPY 101 (103)
Q Consensus 83 l~~~~RNl~De~i~~ia~~ 101 (103)
. .+-+.++.++.||++
T Consensus 194 ~---~~~~~~~~l~~ia~~ 209 (278)
T 1hw6_A 194 K---YDLFGAEPVTAAAAA 209 (278)
T ss_dssp S---SCCTTSHHHHHHHHH
T ss_pred C---ccccccHHHHHHHHH
Confidence 2 234667888888875
No 84
>1h05_A 3-dehydroquinate dehydratase; shikimate pathway, alpha/beta protein, lyase, aromatic amino acid biosynthesis; 1.5A {Mycobacterium tuberculosis} SCOP: c.23.13.1 PDB: 1h0r_A* 1h0s_A* 2dhq_A 2xb8_A* 2y71_A* 2y76_A* 2y77_A* 3n76_A* 3n7a_A* 3n86_A* 3n87_A* 3n8n_A*
Probab=42.10 E-value=76 Score=21.82 Aligned_cols=56 Identities=25% Similarity=0.284 Sum_probs=41.4
Q ss_pred HHcCccEEeeccCCCCchHHHHHHHHh-----cCCeee---ccCCCHHHHHHHHHhcCCCEEEec-CCc
Q psy11267 21 YKLGVRYLTLTHACPTPWYLVVRECNR-----LGMLID---LSHTSVQTMRHVLNISSAPVIFSH-SSA 80 (103)
Q Consensus 21 y~lGvR~i~lt~n~~n~~~~~i~~mn~-----lGmiiD---lSH~s~~t~~d~l~~s~~Pvi~SH-s~~ 80 (103)
-++|+ .+.+...|.=|++|..+.+ -|++|+ .+|.|. +.+||+.....|+|=-| ||+
T Consensus 41 ~~~g~---~~~~~QSN~EgeLId~Ih~a~~~~dgiiINpgA~THtSv-AlrDAl~~v~~P~VEVHiSNi 105 (146)
T 1h05_A 41 AELGL---KAVVRQSDSEAQLLDWIHQAADAAEPVILNAGGLTHTSV-ALRDACAELSAPLIEVHISNV 105 (146)
T ss_dssp HHTTC---EEEEEECSCHHHHHHHHHHHHHHTCCEEEECGGGGGTCH-HHHHHHHTCCSCEEEEESSCG
T ss_pred HHcCC---EEEEEeeCCHHHHHHHHHHhhhcCcEEEECchhhccccH-HHHHHHHhCCCCEEEEEecCc
Confidence 45575 5566666777767666644 488888 579998 78999999999999666 443
No 85
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=42.05 E-value=14 Score=27.17 Aligned_cols=25 Identities=16% Similarity=0.283 Sum_probs=19.6
Q ss_pred ccCCcHHHHHHHHHcC-ccEEeeccC
Q psy11267 9 SLGNSMAVLRMFYKLG-VRYLTLTHA 33 (103)
Q Consensus 9 ~l~~~l~~l~~~y~lG-vR~i~lt~n 33 (103)
+..+.++.|+.+++.| +|++|++-.
T Consensus 125 ~~~e~~~al~~l~~~Gkir~iGvSn~ 150 (290)
T 4gie_A 125 KFVDTWKALEKLYEEKKVRAIGVSNF 150 (290)
T ss_dssp SHHHHHHHHHHHHHTTSEEEEEEESC
T ss_pred cchHHHHHHHHHHHCCCcceeeecCC
Confidence 3344567889999999 999999864
No 86
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=41.58 E-value=84 Score=21.61 Aligned_cols=66 Identities=12% Similarity=0.162 Sum_probs=47.0
Q ss_pred HHHHHHHHHcCccEEeeccCC---C-Cc--hHHHHHHHHhcCCeeeccCC----CHHHHHHHHHhc---CCCEEEecCC
Q psy11267 14 MAVLRMFYKLGVRYLTLTHAC---P-TP--WYLVVRECNRLGMLIDLSHT----SVQTMRHVLNIS---SAPVIFSHSS 79 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n~---~-n~--~~~~i~~mn~lGmiiDlSH~----s~~t~~d~l~~s---~~Pvi~SHs~ 79 (103)
.+.++...++|+..+.+.... . ++ ..++-+.+.+.|+-+-.-|. +.+.+.++++.+ ..|.|..|.+
T Consensus 33 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~p~ 111 (257)
T 3lmz_A 33 DTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVGVPN 111 (257)
T ss_dssp HHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEECSHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCCHHHHHHHHHHHHHhCCCEEEecCC
Confidence 357888999999999988642 1 11 12778888999998766554 456666676665 6888888765
No 87
>3cp5_A Cytochrome C; electron transfer protein, electron transport; HET: HEC; 1.24A {Rhodothermus marinus}
Probab=41.55 E-value=12 Score=23.24 Aligned_cols=15 Identities=13% Similarity=0.392 Sum_probs=13.4
Q ss_pred CCCCHHHHHHhhhhc
Q psy11267 88 RNVPDPVLKLVFPYL 102 (103)
Q Consensus 88 RNl~De~i~~ia~~~ 102 (103)
..|||+++++|+++|
T Consensus 103 ~~Ls~~ei~~l~~Yl 117 (124)
T 3cp5_A 103 MALSEEQARAILEYL 117 (124)
T ss_dssp CCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH
Confidence 379999999999987
No 88
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=40.91 E-value=89 Score=21.71 Aligned_cols=37 Identities=14% Similarity=0.156 Sum_probs=27.2
Q ss_pred cCCcHHHHHHHHHcCccEEeeccCCCCchHHHHHHHHh
Q psy11267 10 LGNSMAVLRMFYKLGVRYLTLTHACPTPWYLVVRECNR 47 (103)
Q Consensus 10 l~~~l~~l~~~y~lGvR~i~lt~n~~n~~~~~i~~mn~ 47 (103)
.++-++.++.+.+-|++.+++++++.+. .+.++++.+
T Consensus 24 ~~~~~~~~~~l~~gGv~~iel~~k~~~~-~~~i~~~~~ 60 (207)
T 2yw3_A 24 GEDLLGLARVLEEEGVGALEITLRTEKG-LEALKALRK 60 (207)
T ss_dssp CCCHHHHHHHHHHTTCCEEEEECSSTHH-HHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCChHH-HHHHHHHhC
Confidence 3445678999999999999999875432 266666655
No 89
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A*
Probab=40.24 E-value=26 Score=25.56 Aligned_cols=22 Identities=23% Similarity=0.353 Sum_probs=18.0
Q ss_pred CcHHHHHHHHHcC-ccEEeeccC
Q psy11267 12 NSMAVLRMFYKLG-VRYLTLTHA 33 (103)
Q Consensus 12 ~~l~~l~~~y~lG-vR~i~lt~n 33 (103)
+-++.|+.+++.| ||++|++-.
T Consensus 133 e~~~al~~l~~~Gkir~iGvSn~ 155 (288)
T 4f40_A 133 DSWRAFEQLYKEKKVRAIGVSNF 155 (288)
T ss_dssp HHHHHHHHHHHTTSEEEEEEESC
T ss_pred HHHHHHHHHHHcCCccEEEeccC
Confidence 3467889999999 999999864
No 90
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=39.93 E-value=24 Score=26.18 Aligned_cols=40 Identities=18% Similarity=0.359 Sum_probs=29.1
Q ss_pred cHHHHHHHHHcC-ccEEeeccCCCCchH------------------------HHHHHHHhcCCee
Q psy11267 13 SMAVLRMFYKLG-VRYLTLTHACPTPWY------------------------LVVRECNRLGMLI 52 (103)
Q Consensus 13 ~l~~l~~~y~lG-vR~i~lt~n~~n~~~------------------------~~i~~mn~lGmii 52 (103)
..+.|+.+++.| ||++|++-.....+. +++..|.+.||.+
T Consensus 160 ~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~i~~~~nq~~~~~~~~~~~ll~~c~~~gI~v 224 (314)
T 3b3d_A 160 AWRALETLYKEGRIKAIGVSNFQIHHLEDLMTAAEIKPMINQVEFHPRLTQKELIRYCQNQGIQM 224 (314)
T ss_dssp HHHHHHHHHHTTSEEEEEEESCCHHHHHHHTTTCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHCCCEeEEEecCCchHHHHHHHHhcCCCeEEEEeccccccchHHHHHHHHHcCCEE
Confidence 456789999999 999999864311100 7888888888876
No 91
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=39.79 E-value=73 Score=21.90 Aligned_cols=66 Identities=11% Similarity=0.124 Sum_probs=43.8
Q ss_pred HHHHHHHHcCccEEeeccCC-------------C-Cc--hHHHHHHHHhcCCeeeccCC----CHHHHHHHHHhc---CC
Q psy11267 15 AVLRMFYKLGVRYLTLTHAC-------------P-TP--WYLVVRECNRLGMLIDLSHT----SVQTMRHVLNIS---SA 71 (103)
Q Consensus 15 ~~l~~~y~lGvR~i~lt~n~-------------~-n~--~~~~i~~mn~lGmiiDlSH~----s~~t~~d~l~~s---~~ 71 (103)
+.++...++|+..+.+.... . ++ ..++-+.+.+.|+-+-..|. +.+.+.++++.+ ..
T Consensus 26 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa 105 (262)
T 3p6l_A 26 EALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFKFAKAMDL 105 (262)
T ss_dssp HHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEECCSSTTHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccCCccHHHHHHHHHHHHHcCC
Confidence 57888889999999887431 0 11 12777778888887765554 234455555554 68
Q ss_pred CEEEecCCc
Q psy11267 72 PVIFSHSSA 80 (103)
Q Consensus 72 Pvi~SHs~~ 80 (103)
|.|..|++.
T Consensus 106 ~~v~~~~~~ 114 (262)
T 3p6l_A 106 EFITCEPAL 114 (262)
T ss_dssp SEEEECCCG
T ss_pred CEEEecCCH
Confidence 888888753
No 92
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=39.67 E-value=22 Score=28.82 Aligned_cols=47 Identities=21% Similarity=0.291 Sum_probs=34.7
Q ss_pred HHHHHHHHH-cCccEEeec--cCCC--------------CchH------HHHHHHHhcC--C----eeec--cCCCHH
Q psy11267 14 MAVLRMFYK-LGVRYLTLT--HACP--------------TPWY------LVVRECNRLG--M----LIDL--SHTSVQ 60 (103)
Q Consensus 14 l~~l~~~y~-lGvR~i~lt--~n~~--------------n~~~------~~i~~mn~lG--m----iiDl--SH~s~~ 60 (103)
.+.|+.+.+ |||-.|-|. +... ..|| ++|+++.+.| | ++|+ .|+++.
T Consensus 194 ~~~LdyLk~~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~LV~~~H~~G~~I~~~VIlD~V~NH~~~~ 271 (637)
T 1ji1_A 194 DQKLGYIKKTLGANILYLNPIFKAPTNHKYDTQDYMAVDPAFGDNSTLQTLINDIHSTANGPKGYLILDGVFNHTGDS 271 (637)
T ss_dssp HHTHHHHHTTTCCCEEEESCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHCSSSSSCCEEEEEECCSBCCTT
T ss_pred HHhHHHHHhccCCCEEEECCCccCCCCCCcCccchhhhccccCCHHHHHHHHHHHHhCCCCccceEEEEECcccCCCC
Confidence 357899999 999998775 2111 2233 9999999999 8 6776 688875
No 93
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=39.65 E-value=29 Score=24.77 Aligned_cols=44 Identities=16% Similarity=0.121 Sum_probs=29.0
Q ss_pred HHHHHHHH-HcCccEEeeccCCC------------CchHHHHHHHHhcCCeeeccCCC
Q psy11267 14 MAVLRMFY-KLGVRYLTLTHACP------------TPWYLVVRECNRLGMLIDLSHTS 58 (103)
Q Consensus 14 l~~l~~~y-~lGvR~i~lt~n~~------------n~~~~~i~~mn~lGmiiDlSH~s 58 (103)
++.|+.+. +.|+|-+.+.-+.. ..|-.+++.++++|+.|.+ |+.
T Consensus 110 ~~el~~~~~~~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~i-H~~ 166 (327)
T 2dvt_A 110 TEELQRCVNDLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDVPFYL-HPR 166 (327)
T ss_dssp HHHHHHHHHTTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHHTCCEEE-ECC
T ss_pred HHHHHHHHhcCCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHcCCeEEE-CCC
Confidence 56677774 45887775432211 1233899999999999987 654
No 94
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=39.61 E-value=21 Score=29.06 Aligned_cols=55 Identities=20% Similarity=0.269 Sum_probs=38.8
Q ss_pred HHHHHHHHHcCccEEeec--cCCC--------------CchH------HHHHHHHhcCC--eeec--cCCCHHH--HHHH
Q psy11267 14 MAVLRMFYKLGVRYLTLT--HACP--------------TPWY------LVVRECNRLGM--LIDL--SHTSVQT--MRHV 65 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt--~n~~--------------n~~~------~~i~~mn~lGm--iiDl--SH~s~~t--~~d~ 65 (103)
.++|+.+.+|||-.|-|+ +... ..|| ++|+++.++|| ++|+ .|+|+.. |.++
T Consensus 242 ~~kLdYLk~LGvt~I~L~Pif~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~V~NHts~~h~wf~~~ 321 (645)
T 4aef_A 242 KEKIDHLVNLGINAIYLTPIFSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDGVFHHTSFFHPYFQDV 321 (645)
T ss_dssp HHTHHHHHHHTCCEEEECCCEEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSHHHHHH
T ss_pred HHhhHHHHHcCCCEEEECCCCCCCCCCCcCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEEEecccccccCCchhhhH
Confidence 358899999999988775 2111 2333 99999999886 6676 6888653 5566
Q ss_pred HHh
Q psy11267 66 LNI 68 (103)
Q Consensus 66 l~~ 68 (103)
++.
T Consensus 322 ~~~ 324 (645)
T 4aef_A 322 VRK 324 (645)
T ss_dssp HHH
T ss_pred hhc
Confidence 654
No 95
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=39.40 E-value=1.2e+02 Score=22.69 Aligned_cols=58 Identities=19% Similarity=0.242 Sum_probs=38.6
Q ss_pred HHHHHHHhc--CCeeeccC-CCHHHHHHHHHhcCCCEEEecCCccccCCCCCCCCHHHHHHhhh
Q psy11267 40 LVVRECNRL--GMLIDLSH-TSVQTMRHVLNISSAPVIFSHSSAFALCPSPRNVPDPVLKLVFP 100 (103)
Q Consensus 40 ~~i~~mn~l--GmiiDlSH-~s~~t~~d~l~~s~~Pvi~SHs~~ral~~~~RNl~De~i~~ia~ 100 (103)
++.++.-+. .|+=|+|- ..+..+.+++..++.|+|..|+.- .+...++-+|....+.+
T Consensus 92 ~Va~~al~aGa~iINDVs~g~~d~~m~~~va~~~~~~vlMH~~~---~p~~~~vv~ev~~~l~~ 152 (270)
T 4hb7_A 92 EVAEACLKLGVDMINDQWAGLYDHRMFQIVAKYDAEIILMHNGN---GNRDEPVVEEMLTSLLA 152 (270)
T ss_dssp HHHHHHHHHTCCEEEETTTTSSCTHHHHHHHHTTCEEEEECCCS---SCCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHhccceeccccccccchhHHHHHHHcCCCeEEecccc---CCccccchhHHHHHHHH
Confidence 666666554 46668985 457789999999999999999532 22333444555544443
No 96
>1h1o_A Cytochrome C-552; electron transport, electron transfer, heme; HET: HEM; 2.13A {Thiobacillus ferrooxidans} SCOP: a.3.1.4 a.3.1.4
Probab=39.38 E-value=13 Score=24.49 Aligned_cols=15 Identities=33% Similarity=0.463 Sum_probs=13.5
Q ss_pred CCCCHHHHHHhhhhc
Q psy11267 88 RNVPDPVLKLVFPYL 102 (103)
Q Consensus 88 RNl~De~i~~ia~~~ 102 (103)
..|||+++++|+++|
T Consensus 166 ~~Ls~~ei~~l~~yl 180 (183)
T 1h1o_A 166 KNITVAQMKDVAAYL 180 (183)
T ss_dssp TTCCHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHH
Confidence 469999999999987
No 97
>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A*
Probab=39.01 E-value=81 Score=22.95 Aligned_cols=59 Identities=8% Similarity=0.089 Sum_probs=39.6
Q ss_pred HHHHHHHhcCCeeeccCCC--HHHHHHHHHhcCCCEEEecCCc--------------------c---ccCCCCCCCCHHH
Q psy11267 40 LVVRECNRLGMLIDLSHTS--VQTMRHVLNISSAPVIFSHSSA--------------------F---ALCPSPRNVPDPV 94 (103)
Q Consensus 40 ~~i~~mn~lGmiiDlSH~s--~~t~~d~l~~s~~Pvi~SHs~~--------------------r---al~~~~RNl~De~ 94 (103)
+++++..+.|+.+.+.|+. .....++++.-..+ ..|... + .+..|--.++++.
T Consensus 179 ~~~~~a~~~g~~v~~gH~~~~~~~~~~~~~~G~~~--~~h~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~h~~~~~~~~ 256 (382)
T 1yrr_A 179 EVISKLANAGIVVSAGHSNATLKEAKAGFRAGITF--ATHLYNAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYAN 256 (382)
T ss_dssp HHHHHHHHTTCEEEECSCCCCHHHHHHHHHHTCCE--ESSTTTTSCCBCSSCCHHHHHHHHCTTCEEEEECSSSSSCHHH
T ss_pred HHHHHHHHCCCEEEEECCCCCHHHHHHHHHcCCCe--eEECCCCCCccccCCcchhhHhhcCCcceeeecCcccccCHHH
Confidence 7899999999999999997 56667777753333 455421 0 1334445678888
Q ss_pred HHHhhh
Q psy11267 95 LKLVFP 100 (103)
Q Consensus 95 i~~ia~ 100 (103)
++.+++
T Consensus 257 ~~~~~~ 262 (382)
T 1yrr_A 257 IRNAKR 262 (382)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877664
No 98
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=38.98 E-value=14 Score=27.17 Aligned_cols=24 Identities=21% Similarity=0.285 Sum_probs=19.1
Q ss_pred CCcHHHHHHHHHcC-ccEEeeccCC
Q psy11267 11 GNSMAVLRMFYKLG-VRYLTLTHAC 34 (103)
Q Consensus 11 ~~~l~~l~~~y~lG-vR~i~lt~n~ 34 (103)
+.-+..|+.+++.| ||++|++-..
T Consensus 140 ~e~~~al~~l~~~Gkir~iGvSn~~ 164 (324)
T 4gac_A 140 KETWKALEVLVAKGLVKALGLSNFN 164 (324)
T ss_dssp HHHHHHHHHHHHTTSBSCEEEESCC
T ss_pred HHHHHHHHHHHHCCCeeEecCCCCC
Confidence 33467899999999 9999998643
No 99
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=38.97 E-value=23 Score=27.50 Aligned_cols=54 Identities=19% Similarity=0.248 Sum_probs=38.5
Q ss_pred HHHHHHHHHcCccEEeec--cCC--------------CCchH------HHHHHHHhcCC--eeec--cCCCHHH--HHHH
Q psy11267 14 MAVLRMFYKLGVRYLTLT--HAC--------------PTPWY------LVVRECNRLGM--LIDL--SHTSVQT--MRHV 65 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt--~n~--------------~n~~~------~~i~~mn~lGm--iiDl--SH~s~~t--~~d~ 65 (103)
.+.|+.+.+|||-.|.|+ +.. +..|| ++|+++.++|| ++|+ .|+|... |.++
T Consensus 59 ~~~LdyL~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~s~~~~~f~~~ 138 (488)
T 2wc7_A 59 MEDLDYIQNLGINAIYFTPIFQSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDGVFNHSSRGFFFFHDV 138 (488)
T ss_dssp HHTHHHHHHHTCCEEEESCCEEECTTCTTSEEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCSBCCSSSHHHHHH
T ss_pred HHhhHHHHHcCCCEEEECCCCCCCCCCCCCCcCccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCCCcCCCcCHHHHHH
Confidence 368899999999998876 211 12333 99999999886 5675 7998754 5566
Q ss_pred HH
Q psy11267 66 LN 67 (103)
Q Consensus 66 l~ 67 (103)
.+
T Consensus 139 ~~ 140 (488)
T 2wc7_A 139 LE 140 (488)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 100
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=38.92 E-value=42 Score=23.08 Aligned_cols=67 Identities=9% Similarity=0.028 Sum_probs=45.6
Q ss_pred HHHHHHHHHcCccEEeeccCC--CCchHHHHHHHHhcCCeeeccC-------CCH-------HHHHHHHHhc---CCCEE
Q psy11267 14 MAVLRMFYKLGVRYLTLTHAC--PTPWYLVVRECNRLGMLIDLSH-------TSV-------QTMRHVLNIS---SAPVI 74 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n~--~n~~~~~i~~mn~lGmiiDlSH-------~s~-------~t~~d~l~~s---~~Pvi 74 (103)
.+.++...++|+..+.+.... .....++-+.+.+.|+-+-.-| ..+ +.+.++++.+ ..|.|
T Consensus 21 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v 100 (275)
T 3qc0_A 21 AEAVDICLKHGITAIAPWRDQVAAIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAELGADCL 100 (275)
T ss_dssp HHHHHHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTTCSCE
T ss_pred HHHHHHHHHcCCCEEEeccccccccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 358899999999999997631 1123388888899998775444 222 3344555554 68988
Q ss_pred EecCCc
Q psy11267 75 FSHSSA 80 (103)
Q Consensus 75 ~SHs~~ 80 (103)
..|++.
T Consensus 101 ~~~~g~ 106 (275)
T 3qc0_A 101 VLVAGG 106 (275)
T ss_dssp EEECBC
T ss_pred EEeeCC
Confidence 888764
No 101
>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis}
Probab=38.84 E-value=1.1e+02 Score=22.25 Aligned_cols=84 Identities=13% Similarity=0.206 Sum_probs=52.3
Q ss_pred cHHHHHHHHHcCc---cEEeeccCCCCch-HHHHHHHHhcCCeeeccCCC--HHHHHHHHHhcCCCEEEecCCc-cc---
Q psy11267 13 SMAVLRMFYKLGV---RYLTLTHACPTPW-YLVVRECNRLGMLIDLSHTS--VQTMRHVLNISSAPVIFSHSSA-FA--- 82 (103)
Q Consensus 13 ~l~~l~~~y~lGv---R~i~lt~n~~n~~-~~~i~~mn~lGmiiDlSH~s--~~t~~d~l~~s~~Pvi~SHs~~-ra--- 82 (103)
+.+.++.+.+.|. +.+++. ..++. .+++++..+.|+.+.+.|+. ......+++ ...+ .++|... .+
T Consensus 157 ~~~~~~~~~~~~~~~ik~~~~~--p~~~~~~~~~~~a~~~g~~v~~gH~~~~~~~~~~a~~-~G~~-~i~H~~~~~~~~~ 232 (396)
T 2vhl_A 157 DVELFKKWQQEAGGLIKIVTLA--PEEDQHFELIRHLKDESIIASMGHTDADSALLSDAAK-AGAS-HMTHLYNAMSPFH 232 (396)
T ss_dssp CHHHHHHHHHHTTTCEEEEEEC--GGGSGGGHHHHHHHHTTCEEEECSBCCCHHHHHHHHH-TTCC-EESSTTSSBCCCC
T ss_pred CHHHHHHHHHhcCCcceEEEEC--CCCCCHHHHHHHHHHCCCEEeecccCCCHHHHHHHHH-cCCC-EeEeCCccCcccc
Confidence 5677888877653 334432 11222 27888999999999988886 455666665 4455 6777532 11
Q ss_pred -------------------cCCCCCCCCHHHHHHhhh
Q psy11267 83 -------------------LCPSPRNVPDPVLKLVFP 100 (103)
Q Consensus 83 -------------------l~~~~RNl~De~i~~ia~ 100 (103)
++.|.-.++++.++.+++
T Consensus 233 ~~~~G~~~~~~~~~~~~~e~~~h~~~l~~~~~~~~~~ 269 (396)
T 2vhl_A 233 HREPGVIGTALAHDGFVTELIADGIHSHPLAAKLAFL 269 (396)
T ss_dssp SSSCHHHHHHHHCTTCEEEEECSSSSSCHHHHHHHHH
T ss_pred cCCCCchhhhhcCCCcEEEEcCCccccCHHHHHHHHh
Confidence 455555677887776554
No 102
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=38.48 E-value=35 Score=24.88 Aligned_cols=46 Identities=22% Similarity=0.168 Sum_probs=34.7
Q ss_pred cCCc-HHHHHHHHHcCccEEeeccCCCCchH-HHHHHHHhcCCeeeccCC
Q psy11267 10 LGNS-MAVLRMFYKLGVRYLTLTHACPTPWY-LVVRECNRLGMLIDLSHT 57 (103)
Q Consensus 10 l~~~-l~~l~~~y~lGvR~i~lt~n~~n~~~-~~i~~mn~lGmiiDlSH~ 57 (103)
+|+. ......+.++|.+..-++--++.++| .++++|.+.|+ |.+|+
T Consensus 55 ~GG~~aNvA~~larLG~~~~~ig~vG~D~~G~~l~~~L~~~GV--dt~~v 102 (351)
T 4gm6_A 55 IGGAEANVAVNLSKLGHPTRIATVVPANPIGKMAVEHLWRHQV--DTAFV 102 (351)
T ss_dssp EECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHHTTE--ECTTE
T ss_pred cCChHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCC--Ccccc
Confidence 3555 45667788999888777777888999 77788999994 55554
No 103
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=38.33 E-value=1e+02 Score=21.57 Aligned_cols=43 Identities=14% Similarity=0.118 Sum_probs=31.3
Q ss_pred HHHHHHHHcCccEEeeccCC--CCchHHHHHHHHhcCCeeeccCC
Q psy11267 15 AVLRMFYKLGVRYLTLTHAC--PTPWYLVVRECNRLGMLIDLSHT 57 (103)
Q Consensus 15 ~~l~~~y~lGvR~i~lt~n~--~n~~~~~i~~mn~lGmiiDlSH~ 57 (103)
+.++...++|+..+.+.... ...+.++-+.+.+.|+-+-.-|.
T Consensus 45 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 89 (290)
T 2zvr_A 45 KGMELAKRVGYQAVEIAVRDPSIVDWNEVKILSEELNLPICAIGT 89 (290)
T ss_dssp HHHHHHHHHTCSEEEEECSCGGGSCHHHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHhCCCEEEEcCCCcchhhHHHHHHHHHHcCCeEEEEec
Confidence 46788899999999998753 13344788888889987744444
No 104
>4hlc_A DTMP kinase, thymidylate kinase; TMK, MRSA, pipiridine, transfera transferase inhibitor complex; HET: T05; 1.55A {Staphylococcus aureus subsp} PDB: 2cck_A 4gfd_A* 4gsy_A* 4hdc_A* 4hej_A* 2ccj_A* 4hld_A* 2ccg_A*
Probab=38.14 E-value=29 Score=24.12 Aligned_cols=49 Identities=14% Similarity=0.055 Sum_probs=34.8
Q ss_pred CcccccccccCCcH--HHHHHHHHcCccEEeeccCCCCchHHHHHHHHhcC
Q psy11267 1 MIGVEGGHSLGNSM--AVLRMFYKLGVRYLTLTHACPTPWYLVVRECNRLG 49 (103)
Q Consensus 1 ~l~~Eg~~~l~~~l--~~l~~~y~lGvR~i~lt~n~~n~~~~~i~~mn~lG 49 (103)
|+.+||.+.-|.+- ..|......|...+..-.-+.+++|+.++++-.-+
T Consensus 4 FI~~EG~dGsGKsTq~~~L~~~L~~~~~v~~~~eP~~t~~g~~ir~~l~~~ 54 (205)
T 4hlc_A 4 FITFEGPEGSGKTTVINEVYHRLVKDYDVIMTREPGGVPTGEEIRKIVLEG 54 (205)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHTTTSCEEEEESSTTCHHHHHHHHHHHSS
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHCCCCEEEeeCCCCChHHHHHHHHHhcc
Confidence 46889999888764 35555556688777655556788998888876554
No 105
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=38.10 E-value=1e+02 Score=21.73 Aligned_cols=68 Identities=15% Similarity=0.197 Sum_probs=42.4
Q ss_pred HHHHHHHHHcCccEEeeccCCCC----------chHHHHHHHHhcCC-ee--------eccCCC-HH-------HHHHHH
Q psy11267 14 MAVLRMFYKLGVRYLTLTHACPT----------PWYLVVRECNRLGM-LI--------DLSHTS-VQ-------TMRHVL 66 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n~~n----------~~~~~i~~mn~lGm-ii--------DlSH~s-~~-------t~~d~l 66 (103)
.+.++...++|+..+.+...... ...++-+.+.+.|+ .+ ++++.. +. .+.+++
T Consensus 21 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~h~~~~~nl~s~d~~~~r~~~~~~~~~~i 100 (303)
T 3aal_A 21 LAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIEEIVVHAPYIINIGNTTNLDTFSLGVDFLRAEI 100 (303)
T ss_dssp HHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCCEEEEECCTTCCTTCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCceEEEeccccccCCCCCcHHHHHHHHHHHHHHH
Confidence 35788899999999999322111 12277777888888 33 333333 22 233444
Q ss_pred Hhc---CCCEEEecCCcc
Q psy11267 67 NIS---SAPVIFSHSSAF 81 (103)
Q Consensus 67 ~~s---~~Pvi~SHs~~r 81 (103)
+.+ ..|.|..|++..
T Consensus 101 ~~A~~lGa~~vv~h~g~~ 118 (303)
T 3aal_A 101 ERTEAIGAKQLVLHPGAH 118 (303)
T ss_dssp HHHHHHTCSEEEECCEEC
T ss_pred HHHHHcCCCEEEECCCcC
Confidence 444 689999998854
No 106
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=37.52 E-value=34 Score=24.15 Aligned_cols=44 Identities=14% Similarity=0.124 Sum_probs=29.5
Q ss_pred HHHHHHHH-HcCccEEeeccC------CCCchHHHHHHHHhcCCeeeccCCC
Q psy11267 14 MAVLRMFY-KLGVRYLTLTHA------CPTPWYLVVRECNRLGMLIDLSHTS 58 (103)
Q Consensus 14 l~~l~~~y-~lGvR~i~lt~n------~~n~~~~~i~~mn~lGmiiDlSH~s 58 (103)
++.|+.+. +.|++-+-+.-+ .+..|-.+++.++++|+.|.+ |+.
T Consensus 106 ~~el~~~~~~~g~~gi~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~i-H~~ 156 (307)
T 2f6k_A 106 VKTVQQALDQDGALGVTVPTNSRGLYFGSPVLERVYQELDARQAIVAL-HPN 156 (307)
T ss_dssp HHHHHHHHHTSCCSEEEEESEETTEETTCGGGHHHHHHHHTTTCEEEE-ECC
T ss_pred HHHHHHHHhccCCcEEEEeccCCCCCCCcHhHHHHHHHHHHcCCeEEE-CCC
Confidence 56777776 478886644222 122345999999999999986 554
No 107
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=37.51 E-value=25 Score=27.11 Aligned_cols=54 Identities=20% Similarity=0.297 Sum_probs=38.1
Q ss_pred HHHHHHHHHcCccEEeec--cCC--------------CCchH------HHHHHHHhcCC--eeec--cCCCHHH--HHHH
Q psy11267 14 MAVLRMFYKLGVRYLTLT--HAC--------------PTPWY------LVVRECNRLGM--LIDL--SHTSVQT--MRHV 65 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt--~n~--------------~n~~~------~~i~~mn~lGm--iiDl--SH~s~~t--~~d~ 65 (103)
.+.|+.+.++||-.|.|+ +.. +..|| ++|+++.+.|| ++|+ .|+|... |.++
T Consensus 53 ~~~LdyL~~LGv~~I~l~Pi~~~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~~~~~~~f~~~ 132 (475)
T 2z1k_A 53 AEKLPYLLDLGVEAIYLNPVFASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDGVFNHTGRGFFAFQHL 132 (475)
T ss_dssp HHTHHHHHHHTCCEEEECCCEEESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSHHHHHH
T ss_pred HHHhHHHHHcCCCEEEECCCcCCCCCCCcCCCCcCccCcccCCHHHHHHHHHHHHHCCCEEEEEEecccccCCCHHHHHH
Confidence 358899999999999876 211 12333 99999999887 5565 6998654 4555
Q ss_pred HH
Q psy11267 66 LN 67 (103)
Q Consensus 66 l~ 67 (103)
++
T Consensus 133 ~~ 134 (475)
T 2z1k_A 133 ME 134 (475)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 108
>1c52_A Cytochrome-C552; electron transport protein, MAD, thermostability; HET: HEM; 1.28A {Thermus thermophilus} SCOP: a.3.1.1 PDB: 1qyz_A* 1r0q_A* 2fwl_A* 1foc_A* 1dt1_A*
Probab=37.36 E-value=14 Score=23.53 Aligned_cols=14 Identities=14% Similarity=0.252 Sum_probs=13.2
Q ss_pred CCCHHHHHHhhhhc
Q psy11267 89 NVPDPVLKLVFPYL 102 (103)
Q Consensus 89 Nl~De~i~~ia~~~ 102 (103)
.|||++|.+|++||
T Consensus 74 ~Lsd~ei~~l~~Yl 87 (131)
T 1c52_A 74 QLKDEEIAAVLNHI 87 (131)
T ss_dssp TSCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHH
Confidence 89999999999987
No 109
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=37.19 E-value=13 Score=27.20 Aligned_cols=29 Identities=21% Similarity=0.305 Sum_probs=24.1
Q ss_pred cccccCCcHHHHHHHHHcCccEEeeccCC
Q psy11267 6 GGHSLGNSMAVLRMFYKLGVRYLTLTHAC 34 (103)
Q Consensus 6 g~~~l~~~l~~l~~~y~lGvR~i~lt~n~ 34 (103)
|+..++.+++.++...++|++.+..|=..
T Consensus 15 G~~~~~~sl~~~~~a~~~G~~~i~~T~H~ 43 (262)
T 3qy7_A 15 GAGDSADSIEMARAAVRQGIRTIIATPHH 43 (262)
T ss_dssp SCSSHHHHHHHHHHHHHTTCCEEECCCBS
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCC
Confidence 56677777889999999999999998643
No 110
>1h32_B Cytochrome C, SOXX; electron transfer, sulfur cycle, soxax complex, thiosulfate oxidation, cysteine persulfide heme ligand; HET: HEC; 1.5A {Rhodovulum sulfidophilum} SCOP: a.3.1.1 PDB: 1h31_B* 1h33_B* 2oz1_B*
Probab=37.14 E-value=16 Score=23.31 Aligned_cols=16 Identities=19% Similarity=0.198 Sum_probs=14.1
Q ss_pred CCCCHHHHHHhhhhcC
Q psy11267 88 RNVPDPVLKLVFPYLT 103 (103)
Q Consensus 88 RNl~De~i~~ia~~~~ 103 (103)
..|||++++.|++||.
T Consensus 119 ~~Ls~~ei~~l~aYl~ 134 (138)
T 1h32_B 119 PLMTAGQIEDVVAYLM 134 (138)
T ss_dssp CSSCHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHH
Confidence 4799999999999973
No 111
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=36.63 E-value=93 Score=22.75 Aligned_cols=89 Identities=12% Similarity=0.045 Sum_probs=52.6
Q ss_pred cCCcHHHHHHHHHcC-ccEEeeccCCCCchHHHHHHHHh-cCCe----ee---ccC-CCHHHHHHHHHhcCCCEEEecCC
Q psy11267 10 LGNSMAVLRMFYKLG-VRYLTLTHACPTPWYLVVRECNR-LGML----ID---LSH-TSVQTMRHVLNISSAPVIFSHSS 79 (103)
Q Consensus 10 l~~~l~~l~~~y~lG-vR~i~lt~n~~n~~~~~i~~mn~-lGmi----iD---lSH-~s~~t~~d~l~~s~~Pvi~SHs~ 79 (103)
+..-++.|+.+++.| ||++|++-.. .+.++++.+ .++- +. .+- ..+..+.+.++..+.+|++--.-
T Consensus 145 ~~e~~~al~~l~~~Gkir~iGvSn~~----~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL 220 (324)
T 3ln3_A 145 FCDTWERLEECXDAGLVXSIGVSNFN----HRQLERILNXPGLXYXPVCNQVECHLYLNQRXLLDYCESXDIVLVAYGAL 220 (324)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCC----HHHHHHHHTCTTCCCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTT
T ss_pred HHHHHHHHHHHHhcCCeeEEEecCCc----HHHHHHHHHhcCccCCceeeEeeeCcccchHHHHHHHHHcCCEEEEecCC
Confidence 334578999999999 9999998643 233444433 2322 11 111 12456777777778887765544
Q ss_pred ccccC------CCCCCCCHHHHHHhhhhc
Q psy11267 80 AFALC------PSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 80 ~ral~------~~~RNl~De~i~~ia~~~ 102 (103)
+.+.- +.|.-+.++.+++||++.
T Consensus 221 ~~g~~~~~~~~~~~~~~~~~~l~~ia~~~ 249 (324)
T 3ln3_A 221 GTQRYXEWVDQNSPVLLNDPVLCDVAXXN 249 (324)
T ss_dssp SCCCCTTTSCTTSCCGGGCHHHHHHHHHH
T ss_pred CCCCcccccccCCcchhcCHHHHHHHHhh
Confidence 44331 112234678899998763
No 112
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=36.19 E-value=70 Score=23.91 Aligned_cols=92 Identities=15% Similarity=0.219 Sum_probs=57.7
Q ss_pred cCCcHHHHHHHHHcCccEEeecc-----CCCC---chH--HHHHHHH-hcCCeeeccCC-----------CH------HH
Q psy11267 10 LGNSMAVLRMFYKLGVRYLTLTH-----ACPT---PWY--LVVRECN-RLGMLIDLSHT-----------SV------QT 61 (103)
Q Consensus 10 l~~~l~~l~~~y~lGvR~i~lt~-----n~~n---~~~--~~i~~mn-~lGmiiDlSH~-----------s~------~t 61 (103)
++.=...++.+...|-..+.|.+ +.++ .+. ..+++.- .+-+++|.||. .- ..
T Consensus 145 ~~ei~~Av~~i~~~Gn~~i~L~~rg~~~~y~~~~~dl~~i~~lk~~~~~~pV~~D~sH~~q~p~~~~~~~~g~~~~~~~i 224 (292)
T 1o60_A 145 PSQMGNIVEKIEECGNDKIILCDRGTNFGYDNLIVDMLGFSVMKKASKGSPVIFDVTHSLQCRDPFGAASSGRRAQVTEL 224 (292)
T ss_dssp GGGHHHHHHHHHHTTCCCEEEEECCEECSTTCEECCTTHHHHHHHHTTSCCEEEEHHHHCC------------CTTHHHH
T ss_pred HHHHHHHHHHHHHcCCCeEEEEECCCCCCCCccccCHHHHHHHHhhCCCCCEEEECCCcccccCccccCCCCChhHHHHH
Confidence 44334567777888877776666 2222 111 4455554 57899999999 22 22
Q ss_pred HHHHHHhcCCC--EEEecCC-ccccCCCCCCCCHHHHHHhhhhc
Q psy11267 62 MRHVLNISSAP--VIFSHSS-AFALCPSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 62 ~~d~l~~s~~P--vi~SHs~-~ral~~~~RNl~De~i~~ia~~~ 102 (103)
...++. ..+- +|=+|-. -+++++++=.++-++++.+.+.+
T Consensus 225 a~aAva-~Ga~Gl~IE~H~~~d~al~Dg~~sl~p~~l~~lv~~i 267 (292)
T 1o60_A 225 ARSGLA-VGIAGLFLEAHPNPNQAKCDGPSALPLSALEGFVSQM 267 (292)
T ss_dssp HHHHHH-HCCSEEEEEEESSGGGCSSCCTTCEEGGGHHHHHHHH
T ss_pred HHHHHH-cCCCEEEEEecCCcccCCchhhcCCCHHHHHHHHHHH
Confidence 233332 3444 8889954 56688999999999988887653
No 113
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=36.16 E-value=16 Score=27.29 Aligned_cols=88 Identities=7% Similarity=-0.029 Sum_probs=49.3
Q ss_pred cCCcHHHHHHHHHcC-ccEEeeccCCCCchHHHHHHHHh-cCCeeecc-----C-CCHHHHHHHHHhcCCCEEEecCCcc
Q psy11267 10 LGNSMAVLRMFYKLG-VRYLTLTHACPTPWYLVVRECNR-LGMLIDLS-----H-TSVQTMRHVLNISSAPVIFSHSSAF 81 (103)
Q Consensus 10 l~~~l~~l~~~y~lG-vR~i~lt~n~~n~~~~~i~~mn~-lGmiiDlS-----H-~s~~t~~d~l~~s~~Pvi~SHs~~r 81 (103)
++.-++.|+.+++.| ||++|++-... +.++++.+ .++-+++- - ..+..+.+.++....+|++--.-+.
T Consensus 154 ~~e~~~al~~l~~~Gkir~iGvSn~~~----~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~c~~~gI~v~ayspL~~ 229 (334)
T 3krb_A 154 LADTWRAMEQLVEEGLVKHIGVSNYTV----PLLADLLNYAKIKPLVNQIEIHPWHPNDATVKFCLDNGIGVTAYSPMGG 229 (334)
T ss_dssp HHHHHHHHHHHHHHTSEEEEEEESCCH----HHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCC
T ss_pred HHHHHHHHHHHHHcCCccEEEEecCCH----HHHHHHHHhCCCceEEeeeecCcccccHHHHHHHHHcCCEEEEEecCCC
Confidence 344567899999999 99999986432 22333322 22322221 1 1134566666666777766544444
Q ss_pred ccCC------C--CCCCCHHHHHHhhhh
Q psy11267 82 ALCP------S--PRNVPDPVLKLVFPY 101 (103)
Q Consensus 82 al~~------~--~RNl~De~i~~ia~~ 101 (103)
++.. . ++.+.++.+++||++
T Consensus 230 G~L~~~~~~~~~~~~~~~~~~l~~iA~~ 257 (334)
T 3krb_A 230 SYADPRDPSGTQKNVILECKTLKAIADA 257 (334)
T ss_dssp SBC-------CCBCGGGGCHHHHHHHHH
T ss_pred CcccCCCCCCCcccchhccHHHHHHHHH
Confidence 3311 1 234566788888765
No 114
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=35.72 E-value=30 Score=25.56 Aligned_cols=25 Identities=16% Similarity=0.307 Sum_probs=19.2
Q ss_pred cCCcHHHHHHHHHcC-ccEEeeccCC
Q psy11267 10 LGNSMAVLRMFYKLG-VRYLTLTHAC 34 (103)
Q Consensus 10 l~~~l~~l~~~y~lG-vR~i~lt~n~ 34 (103)
+..-++.|+.+++.| +|++|++-..
T Consensus 136 ~~e~~~al~~l~~~Gkir~iGvSn~~ 161 (298)
T 3up8_A 136 MAERIGALNEVRNAGKVRHIGISNFN 161 (298)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCC
T ss_pred HHHHHHHHHHHHHcCCccEEEEcCCC
Confidence 334467889999999 8999998653
No 115
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A*
Probab=35.65 E-value=91 Score=23.41 Aligned_cols=86 Identities=12% Similarity=0.062 Sum_probs=49.4
Q ss_pred cCCcHHHHHHHHHcC-ccEEeeccCCCCchHHHHHHHHh-cCCeeecc----CC--CHHHHHHHHHhcCCCEEEecCCcc
Q psy11267 10 LGNSMAVLRMFYKLG-VRYLTLTHACPTPWYLVVRECNR-LGMLIDLS----HT--SVQTMRHVLNISSAPVIFSHSSAF 81 (103)
Q Consensus 10 l~~~l~~l~~~y~lG-vR~i~lt~n~~n~~~~~i~~mn~-lGmiiDlS----H~--s~~t~~d~l~~s~~Pvi~SHs~~r 81 (103)
+..-++.|+.+++.| +|++|++-... +.++++.+ .++-+++- |. ....+.+.+...+..|++--.-+.
T Consensus 168 ~~e~~~aLe~l~~~GkIr~iGvSn~~~----~~l~~~~~~~~i~p~v~Q~e~~~~~~~~~ll~~~~~~gI~v~a~spL~~ 243 (344)
T 2bgs_A 168 MEGVWKEMENLVKDGLVKDIGVCNYTV----TKLNRLLRSAKIPPAVCQMEMHPGWKNDKIFEACKKHGIHITAYSPLGS 243 (344)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCH----HHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCT
T ss_pred HHHHHHHHHHHHHcCCccEEEEecCCH----HHHHHHHHhcCCCceeeecccCcccCcHHHHHHHHHCCCEEEEeCcccC
Confidence 334566899999999 99999985331 22333322 33322211 11 124566666667777765433333
Q ss_pred ccCCCCCCCCHHHHHHhhhhc
Q psy11267 82 ALCPSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 82 al~~~~RNl~De~i~~ia~~~ 102 (103)
+ .|+-+.++.++.||++.
T Consensus 244 G---~~~~~~~~~l~~iA~~~ 261 (344)
T 2bgs_A 244 S---EKNLAHDPVVEKVANKL 261 (344)
T ss_dssp T---TTCCTTCHHHHHHHHHH
T ss_pred C---CchhhccHHHHHHHHHh
Confidence 2 14456778899888753
No 116
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=35.61 E-value=27 Score=27.09 Aligned_cols=88 Identities=16% Similarity=0.172 Sum_probs=55.6
Q ss_pred HHHHHHHHHcCccEEeeccCCC----Cc------h-H-HHHHHHHhcCCeeeccCCCH------HHHHHHHHhcCCC--E
Q psy11267 14 MAVLRMFYKLGVRYLTLTHACP----TP------W-Y-LVVRECNRLGMLIDLSHTSV------QTMRHVLNISSAP--V 73 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n~~----n~------~-~-~~i~~mn~lGmiiDlSH~s~------~t~~d~l~~s~~P--v 73 (103)
...++.+...|-.-+.|+.-|. |+ + + ..+++.-.+-+++|-||..- ....-++. ..+- +
T Consensus 230 ~~Ave~i~~~GN~~viLceRG~~typ~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~G~~~~v~~~a~AAvA-~GA~Gl~ 308 (350)
T 1vr6_A 230 LLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSGGRRDLVIPLSRAAIA-VGAHGII 308 (350)
T ss_dssp HHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHHCSGGGHHHHHHHHHH-HTCSEEE
T ss_pred HHHHHHHHHCCCCeEEEEeCCCCCCCCcChhhhhHHHHHHHHHhhCCCEEEeCCCCCcccchHHHHHHHHHH-hCCCEEE
Confidence 3456667788876666653221 11 1 1 44555434678899999843 22333322 2444 8
Q ss_pred EEecCC-ccccCCCCCCCCHHHHHHhhhhc
Q psy11267 74 IFSHSS-AFALCPSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 74 i~SHs~-~ral~~~~RNl~De~i~~ia~~~ 102 (103)
|=+|-. -+++++++=.++.++++.+.+.+
T Consensus 309 IE~H~~pd~al~D~~~sL~p~e~~~lv~~i 338 (350)
T 1vr6_A 309 VEVHPEPEKALSDGKQSLDFELFKELVQEM 338 (350)
T ss_dssp EEBCSCGGGCSSCGGGCBCHHHHHHHHHHH
T ss_pred EEecCCcccCCCchhhcCCHHHHHHHHHHH
Confidence 888855 46788999999999999887654
No 117
>1m70_A Cytochrome C4; electron transport, diheme protein; HET: HEC; 1.25A {Pseudomonas stutzeri} SCOP: a.3.1.4 a.3.1.4 PDB: 1etp_A* 1m6z_A*
Probab=35.47 E-value=17 Score=24.14 Aligned_cols=15 Identities=7% Similarity=0.310 Sum_probs=13.6
Q ss_pred CCCCHHHHHHhhhhc
Q psy11267 88 RNVPDPVLKLVFPYL 102 (103)
Q Consensus 88 RNl~De~i~~ia~~~ 102 (103)
..|||+++++|++||
T Consensus 172 ~~Ls~~ei~~l~~Yl 186 (190)
T 1m70_A 172 AKLSNKDIEALSSYI 186 (190)
T ss_dssp TTCCHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHH
Confidence 579999999999987
No 118
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=35.47 E-value=39 Score=22.83 Aligned_cols=69 Identities=10% Similarity=0.032 Sum_probs=43.2
Q ss_pred CCcHHHHHHHHHcCccEEeeccCCCCchH-HHHHHHHhc--CCe--eeccCCC-HHHHHHHHHhcCCCEEEecCCc
Q psy11267 11 GNSMAVLRMFYKLGVRYLTLTHACPTPWY-LVVRECNRL--GML--IDLSHTS-VQTMRHVLNISSAPVIFSHSSA 80 (103)
Q Consensus 11 ~~~l~~l~~~y~lGvR~i~lt~n~~n~~~-~~i~~mn~l--Gmi--iDlSH~s-~~t~~d~l~~s~~Pvi~SHs~~ 80 (103)
+..++.++.+.+ |+..+=+.+....++| ++|+++.+. +.. +|+--.. ..++.+.+..+..-.|.-|...
T Consensus 13 ~~~~~~~~~~~~-~v~~iev~~~~~~~~g~~~i~~l~~~~~~~~i~~~l~~~di~~~~~~~a~~~Gad~v~vh~~~ 87 (207)
T 3ajx_A 13 EAALELAGKVAE-YVDIIELGTPLIKAEGLSVITAVKKAHPDKIVFADMKTMDAGELEADIAFKAGADLVTVLGSA 87 (207)
T ss_dssp HHHHHHHHHHGG-GCSEEEECHHHHHHHCTHHHHHHHHHSTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTS
T ss_pred HHHHHHHHHhhc-cCCEEEECcHHHHhhCHHHHHHHHHhCCCCeEEEEEEecCccHHHHHHHHhCCCCEEEEeccC
Confidence 334566777777 8787777664334555 788888765 544 4444334 5666666666777777767654
No 119
>2c1d_B SOXX; sulfur oxidation, cytochrome-C-type, oxidoreductase; HET: HEC; 1.92A {Paracoccus pantotrophus}
Probab=35.33 E-value=18 Score=23.08 Aligned_cols=15 Identities=13% Similarity=0.182 Sum_probs=13.6
Q ss_pred CCCCHHHHHHhhhhc
Q psy11267 88 RNVPDPVLKLVFPYL 102 (103)
Q Consensus 88 RNl~De~i~~ia~~~ 102 (103)
..|||++++.|++||
T Consensus 118 ~~Ls~~ei~~l~aYl 132 (137)
T 2c1d_B 118 PILNAQQIEDVVAFL 132 (137)
T ss_dssp CSSCHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHH
Confidence 479999999999987
No 120
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana}
Probab=35.30 E-value=16 Score=27.40 Aligned_cols=88 Identities=7% Similarity=0.089 Sum_probs=44.4
Q ss_pred cCCcHHHHHHHHHcC-ccEEeeccCCCCchHHHHHHHH-hcCCeeeccC--C----CHHHHHHHHHhcCCCEEEecCCcc
Q psy11267 10 LGNSMAVLRMFYKLG-VRYLTLTHACPTPWYLVVRECN-RLGMLIDLSH--T----SVQTMRHVLNISSAPVIFSHSSAF 81 (103)
Q Consensus 10 l~~~l~~l~~~y~lG-vR~i~lt~n~~n~~~~~i~~mn-~lGmiiDlSH--~----s~~t~~d~l~~s~~Pvi~SHs~~r 81 (103)
+++-++.|+.+++.| ||++|++-... +-++++. ..++-+++-. . -+..+.+.++....+|++--.-+.
T Consensus 156 ~~e~~~aL~~l~~~Gkir~iGvSn~~~----~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~sPL~~ 231 (335)
T 3h7u_A 156 IPSTWKAMEALYDSGKARAIGVSNFST----KKLADLLELARVPPAVNQVECHPSWRQTKLQEFCKSKGVHLSAYSPLGS 231 (335)
T ss_dssp HHHHHHHHHHHHHTTSBSSEEEESCCH----HHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTCC
T ss_pred HHHHHHHHHHHHHcCCccEEEecCCCH----HHHHHHHHhCCCCeEEEecccccccCCHHHHHHHHHCCCEEEEeccCcC
Confidence 344567899999999 99999986431 1222222 2222112110 0 123455555555666555332222
Q ss_pred c--cCCCCCCCCHHHHHHhhhh
Q psy11267 82 A--LCPSPRNVPDPVLKLVFPY 101 (103)
Q Consensus 82 a--l~~~~RNl~De~i~~ia~~ 101 (103)
. ....+..+.++.++.||++
T Consensus 232 g~~~~~~~~~~~~~~l~~iA~~ 253 (335)
T 3h7u_A 232 PGTTWLKSDVLKNPILNMVAEK 253 (335)
T ss_dssp TTCTTSCCCGGGCHHHHHHHHH
T ss_pred CCCCCCCccccccHHHHHHHHH
Confidence 1 1122334456677777654
No 121
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A*
Probab=35.07 E-value=19 Score=26.55 Aligned_cols=24 Identities=8% Similarity=0.227 Sum_probs=19.3
Q ss_pred cCCcHHHHHHHHHcC-ccEEeeccC
Q psy11267 10 LGNSMAVLRMFYKLG-VRYLTLTHA 33 (103)
Q Consensus 10 l~~~l~~l~~~y~lG-vR~i~lt~n 33 (103)
+..-++.|+.+++.| +|++|++-.
T Consensus 147 ~~e~~~al~~l~~~Gkir~iGvSn~ 171 (322)
T 1mi3_A 147 ILETWKALEKLVAAGKIKSIGVSNF 171 (322)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESC
T ss_pred HHHHHHHHHHHHHcCCcCEEEEcCC
Confidence 344567899999999 999999854
No 122
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa}
Probab=34.93 E-value=33 Score=25.22 Aligned_cols=24 Identities=13% Similarity=0.206 Sum_probs=19.2
Q ss_pred cCCcHHHHHHHHHcC-ccEEeeccC
Q psy11267 10 LGNSMAVLRMFYKLG-VRYLTLTHA 33 (103)
Q Consensus 10 l~~~l~~l~~~y~lG-vR~i~lt~n 33 (103)
++.-++.|+.+++.| ||++|++-.
T Consensus 144 ~~e~~~ale~l~~~Gkir~iGvSn~ 168 (312)
T 1zgd_A 144 VKGVWESMEESLKLGLTKAIGVSNF 168 (312)
T ss_dssp HHHHHHHHHHHHHTTSBSCEEEESC
T ss_pred HHHHHHHHHHHHHcCCCCEEEEeCC
Confidence 344567899999999 999999854
No 123
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=34.90 E-value=32 Score=24.88 Aligned_cols=23 Identities=22% Similarity=0.424 Sum_probs=18.1
Q ss_pred CCcHHHHHHHHHcC-ccEEeeccC
Q psy11267 11 GNSMAVLRMFYKLG-VRYLTLTHA 33 (103)
Q Consensus 11 ~~~l~~l~~~y~lG-vR~i~lt~n 33 (103)
..-++.|+.+++.| +|++|++-.
T Consensus 120 ~~~~~~l~~l~~~Gkir~iGvSn~ 143 (276)
T 3f7j_A 120 KDTWRALEKLYKDGKIRAIGVSNF 143 (276)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESC
T ss_pred HHHHHHHHHHHHcCCccEEEeccC
Confidence 34467888899999 899999854
No 124
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A
Probab=34.87 E-value=35 Score=24.88 Aligned_cols=22 Identities=18% Similarity=0.125 Sum_probs=17.6
Q ss_pred CcHHHHHHHHHcC-ccEEeeccC
Q psy11267 12 NSMAVLRMFYKLG-VRYLTLTHA 33 (103)
Q Consensus 12 ~~l~~l~~~y~lG-vR~i~lt~n 33 (103)
.-++.|+.+++.| +|++|++-.
T Consensus 127 e~~~al~~l~~~Gkir~iGvSn~ 149 (283)
T 2wzm_A 127 DSWGGLMKVKEDGIARSIGVCNF 149 (283)
T ss_dssp HHHHHHHHHHHTTSEEEEEEESC
T ss_pred HHHHHHHHHHHcCCccEEEEcCC
Confidence 3456788899999 999999854
No 125
>1gqo_A Dehydroquinase; dehydratase, lyase; 2.10A {Bacillus subtilis} SCOP: c.23.13.1
Probab=34.40 E-value=84 Score=21.52 Aligned_cols=56 Identities=25% Similarity=0.290 Sum_probs=41.4
Q ss_pred HHcCccEEeeccCCCCchHHHHHHHHhc-----CCeee---ccCCCHHHHHHHHHhcCCCEEEec-CCc
Q psy11267 21 YKLGVRYLTLTHACPTPWYLVVRECNRL-----GMLID---LSHTSVQTMRHVLNISSAPVIFSH-SSA 80 (103)
Q Consensus 21 y~lGvR~i~lt~n~~n~~~~~i~~mn~l-----GmiiD---lSH~s~~t~~d~l~~s~~Pvi~SH-s~~ 80 (103)
-++|+ .+.+...|.=|++|..+.+. |++|+ .+|.|. +.+||+...+.|+|=-| ||+
T Consensus 39 ~~~g~---~~~~~QSN~EgeLid~Ih~a~~~~dgiiiNpgA~THtSv-AlrDAl~~v~~P~VEVHiSNi 103 (143)
T 1gqo_A 39 EALHI---QLTFFQSNHEGDLIDAIHEAEEQYSGIVLNPGALSHYSY-AIRDAVSSISLPVVEVHLSNL 103 (143)
T ss_dssp HHHTC---EEEEEECSCHHHHHHHHHHHTTTCSEEEEECGGGGGTCH-HHHHHHHTSCSCEEEEESSCG
T ss_pred HHcCC---EEEEEeeCCHHHHHHHHHHhhhcCcEEEEccchhccccH-HHHHHHHhCCCCEEEEEecCc
Confidence 45565 56666667778777777553 67777 579998 78999999999999666 443
No 126
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar}
Probab=34.35 E-value=36 Score=24.86 Aligned_cols=83 Identities=11% Similarity=0.077 Sum_probs=42.6
Q ss_pred CCcHHHHHHHHHcC-ccEEeeccCCCCchHHHHHHHHhcCCeeeccC-----C-CHHHHHHHHHhcCCCEEEecCCcccc
Q psy11267 11 GNSMAVLRMFYKLG-VRYLTLTHACPTPWYLVVRECNRLGMLIDLSH-----T-SVQTMRHVLNISSAPVIFSHSSAFAL 83 (103)
Q Consensus 11 ~~~l~~l~~~y~lG-vR~i~lt~n~~n~~~~~i~~mn~lGmiiDlSH-----~-s~~t~~d~l~~s~~Pvi~SHs~~ral 83 (103)
..-++.|+.+++.| +|++|++-.....+.+++ ...++..++.. . .+....+.++....+|++--.-+++
T Consensus 141 ~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~---~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~G- 216 (283)
T 3o0k_A 141 METWRAFIKLKEEGRVKSIGVSNFRTADLERLI---KESGVTPVLNQIELHPQFQQDELRLFHGKHDIATEAWSPLGQG- 216 (283)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHH---HHHSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCCC-
T ss_pred HHHHHHHHHHHHCCCcceEEeccCcHHHHHHHH---HhCCCCeEEEEeecCcccCcHHHHHHHHHCCcEEEEecCCCCC-
Confidence 33467888999999 999999864322111222 22233211110 0 1234555555556666554333332
Q ss_pred CCCCCCCCHHHHHHhhhh
Q psy11267 84 CPSPRNVPDPVLKLVFPY 101 (103)
Q Consensus 84 ~~~~RNl~De~i~~ia~~ 101 (103)
+-+.|+.++.||++
T Consensus 217 ----~l~~~~~l~~ia~~ 230 (283)
T 3o0k_A 217 ----KLLEDPTLKSIAEK 230 (283)
T ss_dssp -----CTTCHHHHHHHHH
T ss_pred ----ccccchHHHHHHHH
Confidence 22455666666654
No 127
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=34.21 E-value=33 Score=25.51 Aligned_cols=23 Identities=22% Similarity=0.424 Sum_probs=18.3
Q ss_pred CCcHHHHHHHHHcC-ccEEeeccC
Q psy11267 11 GNSMAVLRMFYKLG-VRYLTLTHA 33 (103)
Q Consensus 11 ~~~l~~l~~~y~lG-vR~i~lt~n 33 (103)
.+-++.|+.+++.| ||++|++-.
T Consensus 154 ~e~~~al~~l~~~Gkir~iGvSn~ 177 (310)
T 3b3e_A 154 KDTWRALEKLYKDGKIRAIGVSNF 177 (310)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESC
T ss_pred HHHHHHHHHHHHcCCcceEeecCC
Confidence 34467888899999 999999864
No 128
>1ccr_A Cytochrome C; electron transport(cytochrome); HET: M3L HEM; 1.50A {Oryza sativa} SCOP: a.3.1.1
Probab=34.15 E-value=17 Score=22.21 Aligned_cols=16 Identities=19% Similarity=0.186 Sum_probs=13.3
Q ss_pred CCCCCHHHHHHhhhhc
Q psy11267 87 PRNVPDPVLKLVFPYL 102 (103)
Q Consensus 87 ~RNl~De~i~~ia~~~ 102 (103)
..-++|++++.|+++|
T Consensus 92 ~~~ls~~ei~~l~aYl 107 (112)
T 1ccr_A 92 PGLXKPQERADLISYL 107 (112)
T ss_dssp CCCCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH
Confidence 3456999999999987
No 129
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei}
Probab=33.94 E-value=35 Score=24.84 Aligned_cols=23 Identities=13% Similarity=0.190 Sum_probs=18.2
Q ss_pred CCcHHHHHHHHHcC-ccEEeeccC
Q psy11267 11 GNSMAVLRMFYKLG-VRYLTLTHA 33 (103)
Q Consensus 11 ~~~l~~l~~~y~lG-vR~i~lt~n 33 (103)
..-++.|+.+++.| +|++|++-.
T Consensus 123 ~~~~~al~~l~~~Gkir~iGvSn~ 146 (281)
T 1vbj_A 123 IDTWKAFEKLYADKKVRAIGVSNF 146 (281)
T ss_dssp HHHHHHHHHHHHTTSBSCEEEESC
T ss_pred HHHHHHHHHHHHCCCccEEEeeCC
Confidence 33466888999999 999999854
No 130
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=33.71 E-value=33 Score=25.24 Aligned_cols=88 Identities=11% Similarity=0.059 Sum_probs=46.3
Q ss_pred cCCcHHHHHHHHHcC-ccEEeeccCCCCchHHHHHHHHhc-CCeeecc----CC--CHHHHHHHHHhcCCCEEEecCCcc
Q psy11267 10 LGNSMAVLRMFYKLG-VRYLTLTHACPTPWYLVVRECNRL-GMLIDLS----HT--SVQTMRHVLNISSAPVIFSHSSAF 81 (103)
Q Consensus 10 l~~~l~~l~~~y~lG-vR~i~lt~n~~n~~~~~i~~mn~l-GmiiDlS----H~--s~~t~~d~l~~s~~Pvi~SHs~~r 81 (103)
+..-++.|+.+++.| +|++|++-.. .+-++++.+. ++-+++- |. -...+.+.+...+..|++--.-+.
T Consensus 131 ~~e~~~al~~l~~~Gkir~iGvSn~~----~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~ 206 (317)
T 1qwk_A 131 VEDVWRQFDAVYKAGLAKAVGVSNWN----NDQISRALALGLTPVHNSQVELHLYFPQHDHVDFCKKHNISVTSYATLGS 206 (317)
T ss_dssp HHHHHHHHHHHHHTTSBSSEEEESCC----HHHHHHHHTTCSSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCS
T ss_pred HHHHHHHHHHHHHcCCeeEEEecCCC----HHHHHHHHHhcCCccceecceeccccCcHHHHHHHHHcCCEEEEecCccC
Confidence 344567899999999 9999998432 1223333322 2212211 11 123455666666666665544444
Q ss_pred ccC--------------CCCCCCCHHHHHHhhhh
Q psy11267 82 ALC--------------PSPRNVPDPVLKLVFPY 101 (103)
Q Consensus 82 al~--------------~~~RNl~De~i~~ia~~ 101 (103)
+.. ..|+.+.++.+++||++
T Consensus 207 G~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~ 240 (317)
T 1qwk_A 207 PGRVNFTLPTGQKLDWAPAPSDLQDQNVLALAEK 240 (317)
T ss_dssp CCEECCBCTTCCBCCCEECSSGGGCHHHHHHHHH
T ss_pred CCcccccccccccccccccchhhccHHHHHHHHH
Confidence 321 01223345777777765
No 131
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana}
Probab=33.30 E-value=31 Score=25.75 Aligned_cols=25 Identities=12% Similarity=0.357 Sum_probs=19.8
Q ss_pred cCCcHHHHHHHHHcC-ccEEeeccCC
Q psy11267 10 LGNSMAVLRMFYKLG-VRYLTLTHAC 34 (103)
Q Consensus 10 l~~~l~~l~~~y~lG-vR~i~lt~n~ 34 (103)
+++-++.|+.+++.| ||++|++-..
T Consensus 152 ~~e~~~aL~~l~~~Gkir~iGvSn~~ 177 (331)
T 3h7r_A 152 ITSTWKAMEALYDSGKARAIGVSNFS 177 (331)
T ss_dssp HHHHHHHHHHHHHTTSBSSEEEESCC
T ss_pred HHHHHHHHHHHHHcCCCcEEEecCCC
Confidence 334567899999999 9999998643
No 132
>3o0r_C Nitric oxide reductase subunit C; oxidoreductase, electron transport, heme, iron, membrane, CY membrane; HET: HEM HEC; 2.70A {Pseudomonas aeruginosa}
Probab=33.13 E-value=18 Score=23.24 Aligned_cols=13 Identities=8% Similarity=0.212 Sum_probs=12.4
Q ss_pred CCHHHHHHhhhhc
Q psy11267 90 VPDPVLKLVFPYL 102 (103)
Q Consensus 90 l~De~i~~ia~~~ 102 (103)
|||+++++|++||
T Consensus 117 Ls~~ei~~l~ayl 129 (146)
T 3o0r_C 117 LSEGQVDDLAEFL 129 (146)
T ss_dssp CCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHH
Confidence 9999999999987
No 133
>1qn2_A Cytochrome CH; electron transport; HET: HEC; 2.01A {Methylobacterium extorquens} SCOP: a.3.1.1
Probab=32.92 E-value=26 Score=20.89 Aligned_cols=16 Identities=19% Similarity=0.285 Sum_probs=13.4
Q ss_pred CCCCCHHHHHHhhhhc
Q psy11267 87 PRNVPDPVLKLVFPYL 102 (103)
Q Consensus 87 ~RNl~De~i~~ia~~~ 102 (103)
...++|+++++|+++|
T Consensus 81 ~~~~s~~di~~l~aYl 96 (100)
T 1qn2_A 81 PGISDPKKVDDIIAYL 96 (100)
T ss_dssp CCCCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH
Confidence 3456899999999987
No 134
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=32.86 E-value=61 Score=21.66 Aligned_cols=33 Identities=9% Similarity=0.034 Sum_probs=26.4
Q ss_pred hHHHHHHHHhcCCeeeccCCCHHHHHHHHHhcCCCEEE
Q psy11267 38 WYLVVRECNRLGMLIDLSHTSVQTMRHVLNISSAPVIF 75 (103)
Q Consensus 38 ~~~~i~~mn~lGmiiDlSH~s~~t~~d~l~~s~~Pvi~ 75 (103)
..-++++|.+.|+. .+++.+|.+.+. +..||++
T Consensus 7 ~~pl~~rl~~~g~~----~~t~~~F~~~v~-~~~~vlV 39 (140)
T 2qgv_A 7 FDALWQRMLARGWT----PVSESRLDDWLT-QAPDGVV 39 (140)
T ss_dssp HHHHHHHHHHTTCE----ECCHHHHHHHHH-TCSSEEE
T ss_pred CChHHHHHHhcCCc----cCCHHHHHHHHh-CCCCEEE
Confidence 33578888777887 789999999985 8888775
No 135
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1
Probab=32.83 E-value=39 Score=24.95 Aligned_cols=23 Identities=22% Similarity=0.332 Sum_probs=17.9
Q ss_pred CCcHHHHHHHHHcC-ccEEeeccC
Q psy11267 11 GNSMAVLRMFYKLG-VRYLTLTHA 33 (103)
Q Consensus 11 ~~~l~~l~~~y~lG-vR~i~lt~n 33 (103)
..-++.|+.+++.| +|++|++-.
T Consensus 131 ~e~~~al~~l~~~Gkir~iGvSn~ 154 (298)
T 1vp5_A 131 HCAWKAMEEMYKDGLVRAIGVSNF 154 (298)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESC
T ss_pred HHHHHHHHHHHHcCCccEEEecCC
Confidence 33466888889999 899999854
No 136
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=32.58 E-value=68 Score=23.87 Aligned_cols=39 Identities=21% Similarity=0.270 Sum_probs=30.6
Q ss_pred HHHHHHHhc--CCeeeccCCCHHHHHHHHHhcCCCEEEecC
Q psy11267 40 LVVRECNRL--GMLIDLSHTSVQTMRHVLNISSAPVIFSHS 78 (103)
Q Consensus 40 ~~i~~mn~l--GmiiDlSH~s~~t~~d~l~~s~~Pvi~SHs 78 (103)
+++++.-+. .|+=|+|-..+..+.+++..++.|+|+.|.
T Consensus 101 ~va~aAl~aGa~iINdvsg~~d~~~~~~~a~~~~~vVlmh~ 141 (282)
T 1aj0_A 101 EVIRESAKVGAHIINDIRSLSEPGALEAAAETGLPVCLMHM 141 (282)
T ss_dssp HHHHHHHHTTCCEEEETTTTCSTTHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHcCCCEEEECCCCCCHHHHHHHHHhCCeEEEEcc
Confidence 555555544 467799877777888888999999999997
No 137
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=32.46 E-value=1.4e+02 Score=22.68 Aligned_cols=57 Identities=18% Similarity=0.070 Sum_probs=41.2
Q ss_pred HHHHHcCccEEeeccCCCCchH------HHHHHHHhcCCeeeccCCCHHHHHHHHHhcCCCEEE
Q psy11267 18 RMFYKLGVRYLTLTHACPTPWY------LVVRECNRLGMLIDLSHTSVQTMRHVLNISSAPVIF 75 (103)
Q Consensus 18 ~~~y~lGvR~i~lt~n~~n~~~------~~i~~mn~lGmiiDlSH~s~~t~~d~l~~s~~Pvi~ 75 (103)
-..++||-..+.+.-+. ..++ +.++-+.+..=+|=+=|.+..+..+..+.++.|||=
T Consensus 78 ~A~~~LGg~~i~l~~~~-ss~~kgEsl~DTarvLs~~~D~iviR~~~~~~~~~lA~~~~vPVIN 140 (325)
T 1vlv_A 78 TAFAEEGGHPIFLSPND-IHLGAKESLEDTARVLGRMVDAIMFRGYKQETVEKLAEYSGVPVYN 140 (325)
T ss_dssp HHHHHTTCEEEEECTTT-CCTTTSSCHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHCSCEEE
T ss_pred HHHHHcCCeEEEECCcc-ccCCCCcCHHHHHHHHHHhCCEEEEECCChHHHHHHHHhCCCCEEe
Confidence 34578888888886532 3334 555555555555666799999999999999999984
No 138
>3edn_A Phenazine biosynthesis protein, PHZF family; diaminopimelate epimerase-like fold, alpha and beta protein class, structural genomics; HET: MSE; 1.50A {Bacillus anthracis}
Probab=32.36 E-value=17 Score=26.63 Aligned_cols=25 Identities=0% Similarity=0.076 Sum_probs=19.2
Q ss_pred CCccccCCCCCCCCHHHHHHhhhhc
Q psy11267 78 SSAFALCPSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 78 s~~ral~~~~RNl~De~i~~ia~~~ 102 (103)
.|..+++...+.++|+++++||+++
T Consensus 19 GNp~aVv~d~~~l~~~~mq~iA~~~ 43 (299)
T 3edn_A 19 GNPAGIVLDADGLTEEEMQRIAEKV 43 (299)
T ss_dssp SEEEEEESCCTTCCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHh
Confidence 3445566667899999999999874
No 139
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=32.33 E-value=37 Score=27.23 Aligned_cols=54 Identities=19% Similarity=0.399 Sum_probs=38.3
Q ss_pred HHHHHHHHHcCccEEeec--cCC--------------CCchH------HHHHHHHhcCC--eeec--cCCCHHH--HHHH
Q psy11267 14 MAVLRMFYKLGVRYLTLT--HAC--------------PTPWY------LVVRECNRLGM--LIDL--SHTSVQT--MRHV 65 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt--~n~--------------~n~~~------~~i~~mn~lGm--iiDl--SH~s~~t--~~d~ 65 (103)
.+.|+.+.+|||-.|-|+ +.. +..|| ++|+++.+.|| ++|+ .|++... |.++
T Consensus 179 ~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~ 258 (588)
T 1j0h_A 179 IDHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFNHCGYEFAPFQDV 258 (588)
T ss_dssp HHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCcccCCCCCCcCccccCccCccCCCHHHHHHHHHHHHHCCCEEEEEECcCcCcccchhHHHH
Confidence 368899999999999876 211 12333 99999999876 6676 7998643 5566
Q ss_pred HH
Q psy11267 66 LN 67 (103)
Q Consensus 66 l~ 67 (103)
++
T Consensus 259 ~~ 260 (588)
T 1j0h_A 259 WK 260 (588)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 140
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=32.22 E-value=26 Score=26.01 Aligned_cols=92 Identities=13% Similarity=0.175 Sum_probs=56.2
Q ss_pred cCCcHHHHHHHHHcCccEEeeccC-----CCC---chHHHHHHHHhc-CCeeeccCCC-----------------HHHHH
Q psy11267 10 LGNSMAVLRMFYKLGVRYLTLTHA-----CPT---PWYLVVRECNRL-GMLIDLSHTS-----------------VQTMR 63 (103)
Q Consensus 10 l~~~l~~l~~~y~lGvR~i~lt~n-----~~n---~~~~~i~~mn~l-GmiiDlSH~s-----------------~~t~~ 63 (103)
++.=...++.+...|-..+.|.+- +++ .+ ..|..|.+. .+++|.||.. .....
T Consensus 131 ~~e~~~Av~~i~~~GN~~i~L~~rG~~~~y~~~~~dl-~~i~~lk~~~pVivD~sH~~q~p~G~s~hs~g~~~~~~~ia~ 209 (267)
T 2nwr_A 131 PWDTKNVVEKLKFGGAKEIYLTERGTTFGYNNLVVDF-RSLPIMKQWAKVIYDATHSVQLPGGLGDKSGGMREFIFPLIR 209 (267)
T ss_dssp GGGGHHHHHHHHHTTCSSEEEEECCEECSSSCEECCT-THHHHHTTTSEEEEETTGGGCCTTC------CCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCeEEEEECCCCCCCCccccCH-HHHHHHHHcCCEEEcCCcccccCCCcCcCCCCchhHHHHHHH
Confidence 343345677777788766666653 222 11 233344332 7889999992 23333
Q ss_pred HHHHhc-CCCEEEecCC-ccccCCCCCCCCHHHHHHhhhhc
Q psy11267 64 HVLNIS-SAPVIFSHSS-AFALCPSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 64 d~l~~s-~~Pvi~SHs~-~ral~~~~RNl~De~i~~ia~~~ 102 (103)
.++..- ..-+|=+|-. -+++++++-.++-++++.+.+.+
T Consensus 210 aava~Ga~G~mIE~H~~pd~al~Dg~qsl~p~~l~~l~~~i 250 (267)
T 2nwr_A 210 AAVAVGCDGVFMETHPEPEKALSDASTQLPLSQLEGIIEAI 250 (267)
T ss_dssp HHHHHCCSEEEEEEESCGGGCSSCTTTCEEGGGHHHHHHHH
T ss_pred HHHHcCCCEEEEEecCCcccCCCccccCCCHHHHHHHHHHH
Confidence 443221 2257779965 56788999999999888877653
No 141
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=32.20 E-value=29 Score=26.51 Aligned_cols=53 Identities=17% Similarity=0.374 Sum_probs=37.3
Q ss_pred HHHHHHHHHcCccEEeec--cCC--------------CCchH------HHHHHHHhcCC--eeec--cCCCHHH--HHHH
Q psy11267 14 MAVLRMFYKLGVRYLTLT--HAC--------------PTPWY------LVVRECNRLGM--LIDL--SHTSVQT--MRHV 65 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt--~n~--------------~n~~~------~~i~~mn~lGm--iiDl--SH~s~~t--~~d~ 65 (103)
.+.|+.+.++||-.|-|+ +.. +..|| ++|+++.+.|| ++|+ .|+|... |.++
T Consensus 26 ~~~LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V~NH~~~~~~~f~~~ 105 (441)
T 1lwj_A 26 KNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVLDLPIHHTGFLHTWFQKA 105 (441)
T ss_dssp HHTHHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTBCCTTCHHHHHH
T ss_pred HHhhHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCCCcccCchHHHHHH
Confidence 468899999999998765 211 12333 99999999886 6676 5998764 4454
Q ss_pred H
Q psy11267 66 L 66 (103)
Q Consensus 66 l 66 (103)
+
T Consensus 106 ~ 106 (441)
T 1lwj_A 106 L 106 (441)
T ss_dssp H
T ss_pred h
Confidence 4
No 142
>2blf_B SORB, sulfite\:cytochrome C oxidoreductase subunit B; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_B* 2c9x_B* 2ca3_B* 2ca4_B*
Probab=32.05 E-value=20 Score=21.36 Aligned_cols=14 Identities=29% Similarity=0.349 Sum_probs=12.2
Q ss_pred CCCHHHHHHhhhhc
Q psy11267 89 NVPDPVLKLVFPYL 102 (103)
Q Consensus 89 Nl~De~i~~ia~~~ 102 (103)
.++|++++.|+++|
T Consensus 64 ~ls~~e~~~I~~YL 77 (81)
T 2blf_B 64 PVDEADAKAIADYL 77 (81)
T ss_dssp CCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 68999999999887
No 143
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=31.80 E-value=41 Score=26.96 Aligned_cols=54 Identities=26% Similarity=0.403 Sum_probs=38.2
Q ss_pred HHHHHHHHHcCccEEeec--cCCC--------------CchH------HHHHHHHhcCC--eeec--cCCCHHH--HHHH
Q psy11267 14 MAVLRMFYKLGVRYLTLT--HACP--------------TPWY------LVVRECNRLGM--LIDL--SHTSVQT--MRHV 65 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt--~n~~--------------n~~~------~~i~~mn~lGm--iiDl--SH~s~~t--~~d~ 65 (103)
.+.|+.+.+|||-.|.|. +... ..|| ++|+++.+.|| ++|+ .|++... |.++
T Consensus 175 ~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~ 254 (583)
T 1ea9_C 175 IDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTFPPFVDV 254 (583)
T ss_dssp HHTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECCCSBCCTTTHHHHHH
T ss_pred HHhhHHHHHcCCCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEccccCCCccHHHHHH
Confidence 467899999999999876 2111 2233 99999999887 6675 6988654 5566
Q ss_pred HH
Q psy11267 66 LN 67 (103)
Q Consensus 66 l~ 67 (103)
++
T Consensus 255 ~~ 256 (583)
T 1ea9_C 255 LK 256 (583)
T ss_dssp HT
T ss_pred Hh
Confidence 54
No 144
>3hjn_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynth nucleotide-binding, transferase, structural genomics; HET: ADP TYD; 2.10A {Thermotoga maritima}
Probab=31.59 E-value=46 Score=22.77 Aligned_cols=47 Identities=21% Similarity=0.149 Sum_probs=33.6
Q ss_pred CcccccccccCCcH--HHH-HHHHHcCccEEeeccCCCCchHHHHHHHHh
Q psy11267 1 MIGVEGGHSLGNSM--AVL-RMFYKLGVRYLTLTHACPTPWYLVVRECNR 47 (103)
Q Consensus 1 ~l~~Eg~~~l~~~l--~~l-~~~y~lGvR~i~lt~n~~n~~~~~i~~mn~ 47 (103)
|+.+||.+.-|.+- ..| +.|-+.|...+..-.-+.+++++.++++-.
T Consensus 2 fI~~EG~DGsGKsTq~~~L~~~L~~~g~~v~~treP~~t~~~~~ir~~l~ 51 (197)
T 3hjn_A 2 FITFEGIDGSGKSTQIQLLAQYLEKRGKKVILKREPGGTETGEKIRKILL 51 (197)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEECCCCCcHHHHHHHHhh
Confidence 46899999988764 233 345667998887766667888877777643
No 145
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=31.54 E-value=1.4e+02 Score=21.32 Aligned_cols=81 Identities=17% Similarity=0.117 Sum_probs=53.3
Q ss_pred HHHHHHHHcCccEEeeccC-------CC-C-------chHHHHHHHHhcCCeeeccCCCH--------------HHHHHH
Q psy11267 15 AVLRMFYKLGVRYLTLTHA-------CP-T-------PWYLVVRECNRLGMLIDLSHTSV--------------QTMRHV 65 (103)
Q Consensus 15 ~~l~~~y~lGvR~i~lt~n-------~~-n-------~~~~~i~~mn~lGmiiDlSH~s~--------------~t~~d~ 65 (103)
+.++...++|+..+.+.-. .. + ...++-+.+.+.|+-+-..|.+. +.+.++
T Consensus 40 ~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (305)
T 3obe_A 40 NGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAGLRISSSHLTPSLREYTKENMPKFDEFWKKA 119 (305)
T ss_dssp HHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTTCEEEEEBCCCSCCCCCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCCCeEEEeeccccccccchhhHHHHHHHHHHH
Confidence 5889999999999999842 11 1 22377888899999887778642 234555
Q ss_pred HHhc---CCCEEEecCCccccCCCCCCCCHHHHHHhhhhc
Q psy11267 66 LNIS---SAPVIFSHSSAFALCPSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 66 l~~s---~~Pvi~SHs~~ral~~~~RNl~De~i~~ia~~~ 102 (103)
++.+ ..|.|..++. ++..++++.+.+++.|
T Consensus 120 i~~A~~lG~~~v~~~~~-------~~~~~~~~~~~~~~~l 152 (305)
T 3obe_A 120 TDIHAELGVSCMVQPSL-------PRIENEDDAKVVSEIF 152 (305)
T ss_dssp HHHHHHHTCSEEEECCC-------CCCSSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEeCCC-------CCCCCHHHHHHHHHHH
Confidence 5554 6887776643 2235677776665543
No 146
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=31.51 E-value=41 Score=26.48 Aligned_cols=62 Identities=10% Similarity=0.041 Sum_probs=41.9
Q ss_pred HHHHHHHhcC--CeeeccCCCHHHHHHHHHhcCCCEEEecCC-c--------cccCCCCCCCCHHHHHHhhhh
Q psy11267 40 LVVRECNRLG--MLIDLSHTSVQTMRHVLNISSAPVIFSHSS-A--------FALCPSPRNVPDPVLKLVFPY 101 (103)
Q Consensus 40 ~~i~~mn~lG--miiDlSH~s~~t~~d~l~~s~~Pvi~SHs~-~--------ral~~~~RNl~De~i~~ia~~ 101 (103)
++++.+.+.| +++=+.|.+.++..+.......|+++...- + ......||.+|.++|+.|.+.
T Consensus 96 ~l~~avH~~G~~i~~QL~H~Gr~~~~~~~~~~g~~~vapS~i~~~~~~~~~~~~~~~~pr~lt~~eI~~ii~~ 168 (407)
T 3tjl_A 96 VITDKVHANGSFVSTQLIFLGRVADPAVMKTRGLNPVSASATYESDAAKEAAEAVGNPVRALTTQEVKDLVYE 168 (407)
T ss_dssp HHHHHHHHTTCEEEEEEECCGGGSCHHHHHHTTCCCEESSSCCSSHHHHHHHHHTTCCCEECCHHHHHHHHHT
T ss_pred HHHHHHHhcCCEEEEEeccCCCccchhhcccCCCcccCCCCcccccccccccccCCCCCCcCCHHHHHHHHHH
Confidence 7778887776 568899999877666554333444433222 2 123567999999999998764
No 147
>3vrd_A FCCA subunit, flavocytochrome C heme subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_C*
Probab=31.47 E-value=21 Score=24.03 Aligned_cols=16 Identities=6% Similarity=0.212 Sum_probs=13.9
Q ss_pred CCCCCHHHHHHhhhhc
Q psy11267 87 PRNVPDPVLKLVFPYL 102 (103)
Q Consensus 87 ~RNl~De~i~~ia~~~ 102 (103)
...|+|+++++|++++
T Consensus 58 ~~~Ls~~di~~la~Y~ 73 (174)
T 3vrd_A 58 AKGYSTADFQKMAEYF 73 (174)
T ss_dssp HTTSCHHHHHHHHHHH
T ss_pred hccCCHHHHHHHHhhh
Confidence 3579999999999986
No 148
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium}
Probab=31.44 E-value=99 Score=23.39 Aligned_cols=61 Identities=18% Similarity=0.164 Sum_probs=40.5
Q ss_pred HHHHHHHhcCCeeec----cCC-----CHHHHHHHHHh---cCCCEEEecCCccccCC-----CCCCCCHHHHHHhhh
Q psy11267 40 LVVRECNRLGMLIDL----SHT-----SVQTMRHVLNI---SSAPVIFSHSSAFALCP-----SPRNVPDPVLKLVFP 100 (103)
Q Consensus 40 ~~i~~mn~lGmiiDl----SH~-----s~~t~~d~l~~---s~~Pvi~SHs~~ral~~-----~~RNl~De~i~~ia~ 100 (103)
++|+.+.+.|+-||. ||. +...+..+++. ...||.+|=-.++.... .....+++.....|+
T Consensus 205 ~~v~~l~~~G~~idgiG~Q~H~~~~~p~~~~~~~~l~~~a~~Glpi~iTEldv~~~~~~~~~~~~~~~~~~~~~~QA~ 282 (356)
T 2dep_A 205 ELVKNLLEKGVPIDGVGHQTHIDIYNPPVERIIESIKKFAGLGLDNIITELDMSIYSWNDRSDYGDSIPDYILTLQAK 282 (356)
T ss_dssp HHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTTTCEEEEEEEEEESSCTTCCCCCCSCCCHHHHHHHHH
T ss_pred HHHHHHHHCCCCccEEEeeeeecCCCCCHHHHHHHHHHHHhCCCeEEEeeceecCCCccccccccCCCCHHHHHHHHH
Confidence 889999999999997 784 35555555544 57899988666655432 223466665555444
No 149
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=31.19 E-value=73 Score=25.09 Aligned_cols=47 Identities=11% Similarity=0.055 Sum_probs=35.1
Q ss_pred HHHHHHHHcCccEEeec--c----------C-----------CC--CchH------HHHHHHHhcCC--eeec--cCCCH
Q psy11267 15 AVLRMFYKLGVRYLTLT--H----------A-----------CP--TPWY------LVVRECNRLGM--LIDL--SHTSV 59 (103)
Q Consensus 15 ~~l~~~y~lGvR~i~lt--~----------n-----------~~--n~~~------~~i~~mn~lGm--iiDl--SH~s~ 59 (103)
+.|+.+.+|||-.|.|. + . -+ ..|| ++|+++.+.|| ++|+ .|++.
T Consensus 41 ~~LdyLk~LGvt~IwL~Pi~e~~~~~~~~~~~~~~~GY~~~~id~~p~~Gt~~dfk~Lv~~aH~~GI~VilD~V~NHt~~ 120 (527)
T 1gcy_A 41 QQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDFNKNGRYGSDAQLRQAASALGGAGVKVLYDVVPNHMNR 120 (527)
T ss_dssp HHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTCSSSCSCSSSCCHHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred HHHHHHHhcCCCEEEeCCccccccccccCCCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEeecCcCC
Confidence 68999999999998865 3 1 12 4555 99999999876 5675 68887
Q ss_pred HH
Q psy11267 60 QT 61 (103)
Q Consensus 60 ~t 61 (103)
..
T Consensus 121 ~~ 122 (527)
T 1gcy_A 121 GY 122 (527)
T ss_dssp TC
T ss_pred CC
Confidence 54
No 150
>2w9k_A Cytochrome C, cytochrome C555; electron transport, intermembrane space, metal-binding, thioether bond, respiratory chain, trypanosome; HET: M3L HEC; 1.55A {Crithidia fasciculata} PDB: 2yk3_A* 4dy9_A*
Probab=31.09 E-value=21 Score=21.95 Aligned_cols=17 Identities=18% Similarity=-0.015 Sum_probs=14.0
Q ss_pred CCCCCCHHHHHHhhhhc
Q psy11267 86 SPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 86 ~~RNl~De~i~~ia~~~ 102 (103)
....++|+++++|++||
T Consensus 93 ~~~~ls~~ei~~l~aYl 109 (114)
T 2w9k_A 93 FAGMKKPQERADVIAYL 109 (114)
T ss_dssp CCCCCCHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHH
Confidence 33468999999999987
No 151
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=31.02 E-value=1.5e+02 Score=21.37 Aligned_cols=67 Identities=10% Similarity=0.046 Sum_probs=47.1
Q ss_pred HHHHHHHHHc-CccEEeeccCCC--CchHHHHHHHHhcCCeeeccCC---------------CH-------HHHHHHHHh
Q psy11267 14 MAVLRMFYKL-GVRYLTLTHACP--TPWYLVVRECNRLGMLIDLSHT---------------SV-------QTMRHVLNI 68 (103)
Q Consensus 14 l~~l~~~y~l-GvR~i~lt~n~~--n~~~~~i~~mn~lGmiiDlSH~---------------s~-------~t~~d~l~~ 68 (103)
.+.++...++ |+..+.+.+... ....++-+.+.+.|+-+..-|. .+ +.+.++++.
T Consensus 36 ~e~l~~aa~~~G~~~VEl~~~~~~~~~~~~l~~~l~~~Gl~i~~~~~~~~~~~~~~g~l~~~d~~~r~~~i~~~~~~i~~ 115 (333)
T 3ktc_A 36 IDQINAAKEVGELSYVDLPYPFTPGVTLSEVKDALKDAGLKAIGITPEIYLQKWSRGAFTNPDPAARAAAFELMHESAGI 115 (333)
T ss_dssp HHHHHHHHHHSSEEEEEEEESCSTTCCHHHHHHHHHHHTCEEEEEEECTTSGGGTTCSTTCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEecCCCcchhHHHHHHHHHHHcCCeEEEEecCcCcccccCCCCCCcCHHHHHHHHHHHHHHHHH
Confidence 4689999999 999999976442 3455888888999998875433 22 124444444
Q ss_pred c---CCCEEEecCCc
Q psy11267 69 S---SAPVIFSHSSA 80 (103)
Q Consensus 69 s---~~Pvi~SHs~~ 80 (103)
+ ..|.|..|++.
T Consensus 116 A~~LGa~~vv~~~g~ 130 (333)
T 3ktc_A 116 VRELGANYVKVWPGQ 130 (333)
T ss_dssp HHHHTCSEEEECCTT
T ss_pred HHHhCCCEEEECCCC
Confidence 4 68988889883
No 152
>1co6_A Protein (cytochrome C2); electron transport(heme protein); HET: HEM; 1.60A {Blastochloris viridis} SCOP: a.3.1.1 PDB: 1cry_A* 1io3_A*
Probab=30.53 E-value=21 Score=21.60 Aligned_cols=14 Identities=7% Similarity=0.188 Sum_probs=12.1
Q ss_pred CCCHHHHHHhhhhc
Q psy11267 89 NVPDPVLKLVFPYL 102 (103)
Q Consensus 89 Nl~De~i~~ia~~~ 102 (103)
-++|+++++|++||
T Consensus 84 l~s~~ei~~l~aYl 97 (107)
T 1co6_A 84 VKDEQKVSDLIAYI 97 (107)
T ss_dssp CCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 34899999999987
No 153
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=30.48 E-value=49 Score=26.84 Aligned_cols=46 Identities=24% Similarity=0.439 Sum_probs=32.4
Q ss_pred HHHHHHHHHcCccEEeec--c--CCCCchH--------------------HHHHHHHhcCC--eeec--cCCCH
Q psy11267 14 MAVLRMFYKLGVRYLTLT--H--ACPTPWY--------------------LVVRECNRLGM--LIDL--SHTSV 59 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt--~--n~~n~~~--------------------~~i~~mn~lGm--iiDl--SH~s~ 59 (103)
.+.|+.+.++||-.|.|. + .....|| ++|+++.+.|| ++|+ .|++.
T Consensus 147 ~~~L~yl~~lGv~~I~L~Pi~~~~~~~~wGY~~~~y~~~~~~~Gt~~d~~~lv~~~H~~Gi~VilD~V~NH~~~ 220 (602)
T 2bhu_A 147 AEKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYGRPEDLMALVDAAHRLGLGVFLDVVYNHFGP 220 (602)
T ss_dssp HHTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSCCCS
T ss_pred HHHHHHHHHcCCCEEEECChhhccCCCCCCcccccCcccCcCCCCHHHHHHHHHHHHHCCCEEEEEeccccccc
Confidence 357899999999998865 2 1112223 99999999776 5676 67773
No 154
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=30.09 E-value=21 Score=27.55 Aligned_cols=45 Identities=16% Similarity=0.215 Sum_probs=32.4
Q ss_pred HHHHHHHHHcCccEEeeccCC---------------CCchH------HHHHHHHhcCC--eeec--cCCC
Q psy11267 14 MAVLRMFYKLGVRYLTLTHAC---------------PTPWY------LVVRECNRLGM--LIDL--SHTS 58 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n~---------------~n~~~------~~i~~mn~lGm--iiDl--SH~s 58 (103)
.++|+.+.++||-.|-|+=-. +..|| ++|+++.++|| ++|+ .|+|
T Consensus 39 ~~~Ldyl~~LGv~~i~l~Pi~~~~~~~y~~~dy~~idp~~Gt~~d~~~lv~~ah~~Gi~vilD~V~NH~s 108 (424)
T 2dh2_A 39 KGRLDYLSSLKVKGLVLGPIHKNQKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDLTPNYRG 108 (424)
T ss_dssp HTTHHHHHHTTCSEEEECCCEEECTTCSTTEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECCTTTTS
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEECCCcCC
Confidence 357889999999998877210 22344 99999999886 5564 6777
No 155
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=30.09 E-value=97 Score=21.88 Aligned_cols=46 Identities=15% Similarity=0.176 Sum_probs=35.4
Q ss_pred cccccCCcHHHHHHHHHcCccEEeeccCCCCchHHHHHHHHhcCCe
Q psy11267 6 GGHSLGNSMAVLRMFYKLGVRYLTLTHACPTPWYLVVRECNRLGML 51 (103)
Q Consensus 6 g~~~l~~~l~~l~~~y~lGvR~i~lt~n~~n~~~~~i~~mn~lGmi 51 (103)
+...+....+.++.+.+.|++.+-.|-|...+..++.+.+.++|+-
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 3455666778899999999999988876655666777788888774
No 156
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=29.85 E-value=81 Score=25.20 Aligned_cols=40 Identities=8% Similarity=0.123 Sum_probs=31.8
Q ss_pred HHHHHHHh----cCC-eeeccCCCHHHHHHHHHhcCCCEEEecCC
Q psy11267 40 LVVRECNR----LGM-LIDLSHTSVQTMRHVLNISSAPVIFSHSS 79 (103)
Q Consensus 40 ~~i~~mn~----lGm-iiDlSH~s~~t~~d~l~~s~~Pvi~SHs~ 79 (103)
+++++.-+ ..| +=|+|=..+..+.++++.++.|||+.|..
T Consensus 280 ~VaeaAL~~~aGa~i~INDVsg~~d~~m~~v~a~~g~~vVlMh~~ 324 (442)
T 3mcm_A 280 EVMQKILAKHHDIIWMINDVECNNIEQKAQLIAKYNKKYVIIHNL 324 (442)
T ss_dssp HHHHHHHHHHGGGCCEEEECCCTTHHHHHHHHHHHTCEEEEECC-
T ss_pred HHHHHHHhhCCCCCEEEEcCCCCCChHHHHHHHHhCCeEEEECCC
Confidence 55555544 567 77999988889999999999999999975
No 157
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=29.62 E-value=67 Score=24.15 Aligned_cols=39 Identities=15% Similarity=0.237 Sum_probs=29.0
Q ss_pred HHHHHHHh--cCCeeeccCCC-HHHHHHHHHhcCCCEEEecC
Q psy11267 40 LVVRECNR--LGMLIDLSHTS-VQTMRHVLNISSAPVIFSHS 78 (103)
Q Consensus 40 ~~i~~mn~--lGmiiDlSH~s-~~t~~d~l~~s~~Pvi~SHs 78 (103)
+++++.-+ ..|+=|+|-.. +..+.+++..++.|+|+.|.
T Consensus 126 ~V~~aAl~aGa~iINdvsg~~~d~~m~~~aa~~g~~vVlmh~ 167 (297)
T 1tx2_A 126 EVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHN 167 (297)
T ss_dssp HHHHHHHHHTCCEEEETTTTSSCTHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHhCCcEEEEeC
Confidence 44444433 45677888775 67788888889999999997
No 158
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=29.49 E-value=1.2e+02 Score=22.90 Aligned_cols=39 Identities=8% Similarity=0.040 Sum_probs=31.7
Q ss_pred HHHHHHHhcC-----CeeeccCCCHHHHHHHHHhcCCCEEEecC
Q psy11267 40 LVVRECNRLG-----MLIDLSHTSVQTMRHVLNISSAPVIFSHS 78 (103)
Q Consensus 40 ~~i~~mn~lG-----miiDlSH~s~~t~~d~l~~s~~Pvi~SHs 78 (103)
+++++.-+.| |+=|++-..+..+.+++..++.|||+.|.
T Consensus 138 ~V~eaal~aga~~k~iINdvs~~~~~~~~~~aa~~g~~vv~m~~ 181 (310)
T 2h9a_B 138 EIFPVIGEALSGRNCLLSSATKDNYKPIVATCMVHGHSVVASAP 181 (310)
T ss_dssp HHHHHHHHHTTTSCCEEEEECTTTHHHHHHHHHHHTCEEEEECS
T ss_pred HHHHHHHHhCCCCCCEEEECCCCccHHHHHHHHHhCCCEEEECh
Confidence 5666655543 77899998888999999999999999996
No 159
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=29.41 E-value=43 Score=26.85 Aligned_cols=54 Identities=31% Similarity=0.445 Sum_probs=38.1
Q ss_pred HHHHHHHHHcCccEEeec--cCC--------------CCchH------HHHHHHHhcCC--eeec--cCCCHHH--HHHH
Q psy11267 14 MAVLRMFYKLGVRYLTLT--HAC--------------PTPWY------LVVRECNRLGM--LIDL--SHTSVQT--MRHV 65 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt--~n~--------------~n~~~------~~i~~mn~lGm--iiDl--SH~s~~t--~~d~ 65 (103)
.+.|+.+.+|||-.|.|. +.. +..|| ++|+++.+.|| ++|+ .|++... |.++
T Consensus 176 ~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~ 255 (585)
T 1wzl_A 176 IDRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVFNHAGDQFFAFRDV 255 (585)
T ss_dssp HHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCTTSHHHHHH
T ss_pred HHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEcCCcCCCccHHHHHH
Confidence 467899999999999876 111 12333 99999999876 5574 6888654 5566
Q ss_pred HH
Q psy11267 66 LN 67 (103)
Q Consensus 66 l~ 67 (103)
++
T Consensus 256 ~~ 257 (585)
T 1wzl_A 256 LQ 257 (585)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 160
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=29.39 E-value=76 Score=23.85 Aligned_cols=54 Identities=20% Similarity=0.212 Sum_probs=35.8
Q ss_pred HHHHHcCccEEeeccCCCCchH---------HHHHHHHhcCCeeeccCCCHHHHHHHHHhcCCCEE
Q psy11267 18 RMFYKLGVRYLTLTHACPTPWY---------LVVRECNRLGMLIDLSHTSVQTMRHVLNISSAPVI 74 (103)
Q Consensus 18 ~~~y~lGvR~i~lt~n~~n~~~---------~~i~~mn~lGmiiDlSH~s~~t~~d~l~~s~~Pvi 74 (103)
-..++||-..+.+.-.....++ .++..|.+ +|=+=|.+.....+..+.++.|||
T Consensus 58 ~A~~~LGg~~i~l~~~~~s~~~kgEsl~DTarvls~~~D---~iviR~~~~~~~~~la~~~~vPVI 120 (299)
T 1pg5_A 58 KAIINLGGDVIGFSGEESTSVAKGENLADTIRMLNNYSD---GIVMRHKYDGASRFASEISDIPVI 120 (299)
T ss_dssp HHHHHTTCEEEEEECC-------CCCHHHHHHHHHHHCS---EEEEEESSBTHHHHHHHHCSSCEE
T ss_pred HHHHHhCCEEEEeCCCCcccccCCCCHHHHHHHHHHhCC---EEEEeCCChhHHHHHHHhCCCCEE
Confidence 4568899998888755433444 56666643 344457778889999999999998
No 161
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=29.37 E-value=20 Score=26.84 Aligned_cols=24 Identities=21% Similarity=0.300 Sum_probs=19.1
Q ss_pred cCCcHHHHHHHHHcC-ccEEeeccC
Q psy11267 10 LGNSMAVLRMFYKLG-VRYLTLTHA 33 (103)
Q Consensus 10 l~~~l~~l~~~y~lG-vR~i~lt~n 33 (103)
++.-++.|+.+++.| ||++|++-.
T Consensus 154 ~~e~~~al~~l~~~Gkir~iGvSn~ 178 (348)
T 3n2t_A 154 IDESARELQKLHQDGKIRALGVSNF 178 (348)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESC
T ss_pred HHHHHHHHHHHHHhCcceEEecCCC
Confidence 344567889999999 999999865
No 162
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=29.19 E-value=79 Score=23.41 Aligned_cols=14 Identities=14% Similarity=0.119 Sum_probs=10.3
Q ss_pred CCCCHHHHHHhhhh
Q psy11267 88 RNVPDPVLKLVFPY 101 (103)
Q Consensus 88 RNl~De~i~~ia~~ 101 (103)
=.+++++++.++++
T Consensus 258 ~~~~~~~~~~~~~~ 271 (447)
T 4f0r_A 258 VHLNDAEVELAARH 271 (447)
T ss_dssp CSCCHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHc
Confidence 35788888888763
No 163
>1ycc_A Cytochrome C; electron transport (cytochrome); HET: M3L HEM; 1.23A {Saccharomyces cerevisiae} SCOP: a.3.1.1 PDB: 1kyo_W* 3cx5_W* 2gb8_B* 2pcc_B* 2b12_B* 2jti_B* 2b11_B* 2b0z_B* 2bcn_B* 1u74_B* 2b10_B* 1yfc_A* 1yic_A* 1nmi_A* 2hv4_A* 2orl_A* 3tyi_A* 1crh_A* 2ycc_A* 1csw_A* ...
Probab=28.99 E-value=24 Score=21.32 Aligned_cols=14 Identities=14% Similarity=0.242 Sum_probs=12.3
Q ss_pred CC-CHHHHHHhhhhc
Q psy11267 89 NV-PDPVLKLVFPYL 102 (103)
Q Consensus 89 Nl-~De~i~~ia~~~ 102 (103)
.+ +|+++++|+++|
T Consensus 89 ~l~s~~ei~~l~aYl 103 (108)
T 1ycc_A 89 GLKKEKDRNDLITYL 103 (108)
T ss_dssp CCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH
Confidence 45 899999999987
No 164
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=28.84 E-value=57 Score=22.47 Aligned_cols=46 Identities=9% Similarity=0.077 Sum_probs=34.7
Q ss_pred cccCCcHHHHHHHHHcCccEEeeccCCCCchHHHHHHHHhcCCeee
Q psy11267 8 HSLGNSMAVLRMFYKLGVRYLTLTHACPTPWYLVVRECNRLGMLID 53 (103)
Q Consensus 8 ~~l~~~l~~l~~~y~lGvR~i~lt~n~~n~~~~~i~~mn~lGmiiD 53 (103)
..+....+.|+.+.+.|++.+-.|-+...++..+.+.+.++|+-+.
T Consensus 21 ~~i~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~ 66 (264)
T 3epr_A 21 SRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP 66 (264)
T ss_dssp EECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC
T ss_pred EECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC
Confidence 3444456789999999999999987665666677888888887543
No 165
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=28.83 E-value=20 Score=26.22 Aligned_cols=25 Identities=16% Similarity=0.295 Sum_probs=19.6
Q ss_pred ccCCcHHHHHHHHHcC-ccEEeeccC
Q psy11267 9 SLGNSMAVLRMFYKLG-VRYLTLTHA 33 (103)
Q Consensus 9 ~l~~~l~~l~~~y~lG-vR~i~lt~n 33 (103)
+++.-++.|+.+++.| ||++|++-.
T Consensus 132 ~~~e~~~al~~l~~~Gkir~iGvSn~ 157 (312)
T 1pyf_A 132 PKDEAVNALNEMKKAGKIRSIGVSNF 157 (312)
T ss_dssp CHHHHHHHHHHHHHTTSBSCEEEESC
T ss_pred CHHHHHHHHHHHHHCCCcCEEEecCC
Confidence 3445577889999999 999999854
No 166
>2gc4_D Cytochrome C-L; electron transfer, methylamine dehydrogenase, blue copper protein, oxidoreductase, electron transport; HET: TRQ HEM; 1.90A {Paracoccus denitrificans} SCOP: a.3.1.1 PDB: 2gc7_D* 2mta_C* 1mg2_D* 1mg3_D*
Probab=28.68 E-value=30 Score=22.36 Aligned_cols=17 Identities=0% Similarity=-0.093 Sum_probs=14.4
Q ss_pred CCCCCCHHHHHHhhhhc
Q psy11267 86 SPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 86 ~~RNl~De~i~~ia~~~ 102 (103)
....|||+++++|+++|
T Consensus 104 ~~~~ls~~ei~~l~~Yl 120 (147)
T 2gc4_D 104 MWGSLTLDEMLRTMAWV 120 (147)
T ss_dssp CTTTSCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHH
Confidence 34579999999999987
No 167
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=28.60 E-value=1.1e+02 Score=21.16 Aligned_cols=46 Identities=13% Similarity=0.151 Sum_probs=34.5
Q ss_pred cccccCCcHHHHHHHHHcCccEEeeccCCCCchHHHHHHHHhcCCe
Q psy11267 6 GGHSLGNSMAVLRMFYKLGVRYLTLTHACPTPWYLVVRECNRLGML 51 (103)
Q Consensus 6 g~~~l~~~l~~l~~~y~lGvR~i~lt~n~~n~~~~~i~~mn~lGmi 51 (103)
+...+.+..+.|+.+.+.|++.+-.|-|.......+.+.+.++|+-
T Consensus 28 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~ 73 (284)
T 2hx1_A 28 YNGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLF 73 (284)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCT
T ss_pred CCeeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcC
Confidence 3445666788999999999999988866544555677777777774
No 168
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=28.56 E-value=74 Score=23.19 Aligned_cols=76 Identities=11% Similarity=0.107 Sum_probs=50.5
Q ss_pred HHHHHHHHcCccEEeeccCC---------------CCchHHHHHHHHhcCCeeeccCCCHHHHHHHHHhcCCCEEEecCC
Q psy11267 15 AVLRMFYKLGVRYLTLTHAC---------------PTPWYLVVRECNRLGMLIDLSHTSVQTMRHVLNISSAPVIFSHSS 79 (103)
Q Consensus 15 ~~l~~~y~lGvR~i~lt~n~---------------~n~~~~~i~~mn~lGmiiDlSH~s~~t~~d~l~~s~~Pvi~SHs~ 79 (103)
..++.+.+.|+..+.+.-.+ ...+.+++++..+.|+.+.+=..+...+.++++.-.. .+.|..
T Consensus 176 ~~v~~~~~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i~~~l~~g~~--~i~H~~ 253 (423)
T 3feq_A 176 LAVREEIQKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAANTYVMAHAYTGRAIARAVRCGVR--TIEHGN 253 (423)
T ss_dssp HHHHHHHHTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCCEEEEEEEHHHHHHHHHHTCC--EEEEEE
T ss_pred HHHHHHHHcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCC--EEeccC
Confidence 45677777887776654321 0112288899999999998855567778888875332 345654
Q ss_pred ccccCCCCCCCCHHHHHHhhhh
Q psy11267 80 AFALCPSPRNVPDPVLKLVFPY 101 (103)
Q Consensus 80 ~ral~~~~RNl~De~i~~ia~~ 101 (103)
.++++.++.++++
T Consensus 254 ---------~~~~~~~~~l~~~ 266 (423)
T 3feq_A 254 ---------LVDEAAAKLMHEH 266 (423)
T ss_dssp ---------ECCHHHHHHHHHH
T ss_pred ---------cCCHHHHHHHHHC
Confidence 3578888888764
No 169
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=28.54 E-value=56 Score=26.09 Aligned_cols=46 Identities=17% Similarity=0.383 Sum_probs=31.8
Q ss_pred HHHHHHHHHcCccEEeec--cC--CCC--------------chH------HHHHHHHhcCC--eeec--cCCCH
Q psy11267 14 MAVLRMFYKLGVRYLTLT--HA--CPT--------------PWY------LVVRECNRLGM--LIDL--SHTSV 59 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt--~n--~~n--------------~~~------~~i~~mn~lGm--iiDl--SH~s~ 59 (103)
.+.|+.+.++|+-.|.|. +. ... .+| ++|+++.+.|| ++|+ .|++.
T Consensus 122 ~~~l~~l~~lG~~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 195 (558)
T 3vgf_A 122 IRKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQNSYGGPEGFRKLVDEAHKKGLGVILDVVYNHVGP 195 (558)
T ss_dssp HHTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCSCCCS
T ss_pred HHHHHHHHHcCCcEEEECCcccCCCCCCcCcccccccccccccCCHHHHHHHHHHHHHcCCEEEEEEeeccccC
Confidence 457899999999988764 21 112 222 89999999876 4565 58874
No 170
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=28.50 E-value=1.7e+02 Score=22.33 Aligned_cols=54 Identities=11% Similarity=0.096 Sum_probs=38.3
Q ss_pred HHHHHcCccEEeeccCCCCchH---------HHHHHHHhcCCeeeccCCCHHHHHHHHHhcCCCEEE
Q psy11267 18 RMFYKLGVRYLTLTHACPTPWY---------LVVRECNRLGMLIDLSHTSVQTMRHVLNISSAPVIF 75 (103)
Q Consensus 18 ~~~y~lGvR~i~lt~n~~n~~~---------~~i~~mn~lGmiiDlSH~s~~t~~d~l~~s~~Pvi~ 75 (103)
-..++||-..+.+.-+. ..++ .++..|- =+|=+=|.+..+..+..+.++.|||=
T Consensus 65 ~A~~~LGg~~i~l~~~~-ss~~kgEsl~DTarvLs~~~---D~IviR~~~~~~~~~lA~~s~vPVIN 127 (335)
T 1dxh_A 65 VAAYDQGANVTYIDPNS-SQIGHKESMKDTARVLGRMY---DAIEYRGFKQEIVEELAKFAGVPVFN 127 (335)
T ss_dssp HHHHHTTCEEEEECTTT-CCBTTTBCHHHHHHHHHHHC---SEEEEECSCHHHHHHHHHHSSSCEEE
T ss_pred HHHHHcCCeEEEECCcc-ccCcCCCcHHHHHHHHHhhC---CEEEEecCChhHHHHHHHhCCCCEEc
Confidence 34578888888886432 3333 5555553 34556689999999999999999983
No 171
>1uqr_A 3-dehydroquinate dehydratase; shikimate pathway, aromatic amino acid biosynthesis, lyase; 1.7A {Actinobacillus pleuropneumoniae} SCOP: c.23.13.1
Probab=28.49 E-value=70 Score=22.20 Aligned_cols=56 Identities=25% Similarity=0.262 Sum_probs=42.0
Q ss_pred HHcCccEEeeccCCCCchHHHHHHHHhc-----CCeee---ccCCCHHHHHHHHHhcCCCEEEec-CCc
Q psy11267 21 YKLGVRYLTLTHACPTPWYLVVRECNRL-----GMLID---LSHTSVQTMRHVLNISSAPVIFSH-SSA 80 (103)
Q Consensus 21 y~lGvR~i~lt~n~~n~~~~~i~~mn~l-----GmiiD---lSH~s~~t~~d~l~~s~~Pvi~SH-s~~ 80 (103)
-++|+ .+.+...|.=|++|..+.+. |++|+ .+|.|. +.+||+.....|+|=-| ||+
T Consensus 40 ~~~g~---~l~~~QSN~EGeLId~Ih~a~~~~dgiIINpgA~THtSv-AlrDAl~~v~~P~VEVHiSNi 104 (154)
T 1uqr_A 40 QAQGY---ELDYFQANGEESLINRIHQAFQNTDFIIINPGAFTHTSV-AIRDALLAVSIPFIEVHLSNV 104 (154)
T ss_dssp HHTTC---EEEEEECSSHHHHHHHHHHTTTTCCEEEEECTTHHHHCH-HHHHHHHHHTCCEEEEESSCG
T ss_pred HHCCC---EEEEEeeCCHHHHHHHHHHhhhcCcEEEECcchhccchH-HHHHHHHhCCCCEEEEEecCc
Confidence 45575 56666677788888888664 67777 468888 78999999999999666 444
No 172
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A*
Probab=28.48 E-value=1e+02 Score=23.44 Aligned_cols=44 Identities=18% Similarity=0.137 Sum_probs=32.4
Q ss_pred HHHHHHHhcCCeeec----cCC-----CHHHHHHHHHh---cCCCEEEecCCcccc
Q psy11267 40 LVVRECNRLGMLIDL----SHT-----SVQTMRHVLNI---SSAPVIFSHSSAFAL 83 (103)
Q Consensus 40 ~~i~~mn~lGmiiDl----SH~-----s~~t~~d~l~~---s~~Pvi~SHs~~ral 83 (103)
++|+.+.+.|+.||. +|. +...+.++++. ...||.+|=-.++..
T Consensus 206 ~~v~~l~~~G~~idgiG~Q~H~~~~~p~~~~~~~~l~~~a~~Gl~i~iTElDi~~~ 261 (356)
T 2uwf_A 206 NLVKDLLEQGVPIDGVGHQSHIQIGWPSIEDTRASFEKFTSLGLDNQVTELDMSLY 261 (356)
T ss_dssp HHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTTTCEEEEEEEEEESS
T ss_pred HHHHHHHHCCCcccEEEEEEecCCCCCCHHHHHHHHHHHHhcCCcEEEEeccccCC
Confidence 799999999999997 683 45666666554 478998886655543
No 173
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A*
Probab=28.33 E-value=38 Score=25.14 Aligned_cols=24 Identities=25% Similarity=0.425 Sum_probs=18.4
Q ss_pred cCCcHHHHHHHHHcC-ccEEeeccC
Q psy11267 10 LGNSMAVLRMFYKLG-VRYLTLTHA 33 (103)
Q Consensus 10 l~~~l~~l~~~y~lG-vR~i~lt~n 33 (103)
++..++.|+.+++.| ||++|++-.
T Consensus 134 ~~e~~~al~~l~~~Gkir~iGvSn~ 158 (337)
T 3v0s_A 134 IEITMGELXXLVEEGKIXYVGLSEA 158 (337)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESC
T ss_pred HHHHHHHHHHHHHCCCeeEEeccCC
Confidence 344567888899999 899998854
No 174
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=28.23 E-value=1.7e+02 Score=21.13 Aligned_cols=84 Identities=14% Similarity=0.066 Sum_probs=46.0
Q ss_pred HHHHHHHHHcCccEEeeccCC----------CCchHHHHHHHHhc-CC-eeecc-----CCCHHHHHHHHHhcC--CCEE
Q psy11267 14 MAVLRMFYKLGVRYLTLTHAC----------PTPWYLVVRECNRL-GM-LIDLS-----HTSVQTMRHVLNISS--APVI 74 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n~----------~n~~~~~i~~mn~l-Gm-iiDlS-----H~s~~t~~d~l~~s~--~Pvi 74 (103)
++.++.+.+.|++.+.++-.. ...+.++++++.+. |+ .+-++ .+++. ..+.+..+. .+-+
T Consensus 39 ~~ei~~l~~~G~~ei~l~g~~~~~yG~~~~~~~~l~~Ll~~l~~~~gi~~ir~~~~~p~~l~~e-~l~~l~~~g~~~~~l 117 (304)
T 2qgq_A 39 TREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPDLLRRLNSLNGEFWIRVMYLHPDHLTEE-IISAMLELDKVVKYF 117 (304)
T ss_dssp HHHHHHHHHTTCCEEEEECTTGGGTTHHHHSSCCHHHHHHHHHTSSSSCEEEECCCCGGGCCHH-HHHHHHHCTTBCCEE
T ss_pred HHHHHHHHHCCCcEEEEEeEcccccCCCCCcHHHHHHHHHHHHhcCCCcEEEEeeeecccCCHH-HHHHHHhCCCCccEE
Confidence 456778888899999876421 23455899999886 66 34332 23443 344555444 3322
Q ss_pred EecCCcccc-----CCCCCCCCHHHHHHhhh
Q psy11267 75 FSHSSAFAL-----CPSPRNVPDPVLKLVFP 100 (103)
Q Consensus 75 ~SHs~~ral-----~~~~RNl~De~i~~ia~ 100 (103)
|=+..+. ..-.|..+-+++....+
T Consensus 118 --~i~lqs~s~~vl~~m~r~~t~e~~~~~i~ 146 (304)
T 2qgq_A 118 --DVPVQHGSDKILKLMGRTKSSEELKKMLS 146 (304)
T ss_dssp --ECCCBCSCHHHHHHTTCCSCHHHHHHHHH
T ss_pred --EEecccCCHHHHHHhCCCCCHHHHHHHHH
Confidence 2233332 22345666555554443
No 175
>2xsa_A Ogoga, hyaluronoglucosaminidase; O-GLCNACYLATION, O-GLCNACASE, glycosyl hydrolase, hydrolase; 2.00A {Oceanicola granulosus} PDB: 2xsb_A*
Probab=28.12 E-value=35 Score=27.50 Aligned_cols=20 Identities=25% Similarity=0.384 Sum_probs=17.2
Q ss_pred HHHHHHHHHcCccEEeeccC
Q psy11267 14 MAVLRMFYKLGVRYLTLTHA 33 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n 33 (103)
...++.+|++|||.+++-..
T Consensus 96 ~~K~~ql~~lGVr~FaIlfD 115 (447)
T 2xsa_A 96 LARVDQLARAGLRNLVLLFD 115 (447)
T ss_dssp HHHHHHHHHTTCCEEEEECS
T ss_pred HHHHHHHHHhCCCEEEEecc
Confidence 34788899999999999874
No 176
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=27.88 E-value=29 Score=26.44 Aligned_cols=93 Identities=16% Similarity=0.122 Sum_probs=59.2
Q ss_pred ccCCcHHHHHHHHHcCccEEeeccCC-----CC---chH--HHHHHHHhcCCeeeccCC------------C-----HHH
Q psy11267 9 SLGNSMAVLRMFYKLGVRYLTLTHAC-----PT---PWY--LVVRECNRLGMLIDLSHT------------S-----VQT 61 (103)
Q Consensus 9 ~l~~~l~~l~~~y~lGvR~i~lt~n~-----~n---~~~--~~i~~mn~lGmiiDlSH~------------s-----~~t 61 (103)
.+++=...++.+.+.|-.-+.|++-. +| .+. ..+++ -.+-+++|-||. + ...
T Consensus 167 t~~ei~~ave~i~~~Gn~~iiL~erg~~y~~~~~~vdl~~i~~lk~-~~~PV~~D~sHsvq~p~~~~~~s~G~r~~v~~~ 245 (298)
T 3fs2_A 167 APWDMKNVLAKITESGNPNVLATERGVSFGYNTLVSDMRALPIMAG-LGAPVIFDATHSVQQPGGQGGSTGGQREFVETL 245 (298)
T ss_dssp CGGGHHHHHHHHHTTTCCCEEEEECCEECSSSCEECCTTHHHHHHT-TTSCEEEEHHHHTCCCC--------CGGGHHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccCHHHHHHHHH-cCCcEEEcCCCccccCCcccCCCCCchhhHHHH
Confidence 33333457777888888777776622 22 122 44555 357778999997 4 222
Q ss_pred HHHHHHh-cCCCEEEecCCc-cccCCCCCCCCHHHHHHhhhhc
Q psy11267 62 MRHVLNI-SSAPVIFSHSSA-FALCPSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 62 ~~d~l~~-s~~Pvi~SHs~~-ral~~~~RNl~De~i~~ia~~~ 102 (103)
..-++.. ++.-+|=.|-+. +++++|+-.++-++++.+.+.+
T Consensus 246 a~AAvAlGAdGl~IE~H~tpd~al~D~~~sl~p~el~~lv~~i 288 (298)
T 3fs2_A 246 ARAAVAVGVAGFFIETHEDPDNAPSDGPNMVPIDKMPALLEKL 288 (298)
T ss_dssp HHHHHHHCCSEEEEEEESSGGGCSSSGGGCEEGGGHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEecCChhccCCchhhcCCHHHHHHHHHHH
Confidence 3333322 233488899664 8899999999999988877654
No 177
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Probab=27.82 E-value=74 Score=23.41 Aligned_cols=88 Identities=9% Similarity=0.009 Sum_probs=51.1
Q ss_pred CCcHHHHHHHHHcC-ccEEeeccCCCCchHHHHHHHHh-cCCe----e---eccCC-CHHHHHHHHHhcCCCEEEecCCc
Q psy11267 11 GNSMAVLRMFYKLG-VRYLTLTHACPTPWYLVVRECNR-LGML----I---DLSHT-SVQTMRHVLNISSAPVIFSHSSA 80 (103)
Q Consensus 11 ~~~l~~l~~~y~lG-vR~i~lt~n~~n~~~~~i~~mn~-lGmi----i---DlSH~-s~~t~~d~l~~s~~Pvi~SHs~~ 80 (103)
..-++.|+.+++.| +|++|++-.. .+.++++.+ .++- + ..+=. -...+.+.+...+..|++--.-+
T Consensus 148 ~e~~~ale~l~~~Gkir~iGvSn~~----~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~ 223 (326)
T 3buv_A 148 CATWEAMEACKDAGLVKSLGVSNFN----RRQLELILNKPGLKHKPVSNQVECHPYFTQPKLLKFCQQHDIVITAYSPLG 223 (326)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCC----HHHHHHHHTCTTCCSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTC
T ss_pred HHHHHHHHHHHHcCCccEEEEeCCC----HHHHHHHHHhCCCCCCCeeeeeecccccCcHHHHHHHHHcCCEEEEecccc
Confidence 34567899999999 9999997542 123444433 2332 1 11111 12456666666777776655444
Q ss_pred cccC------CCCCCCCHHHHHHhhhhc
Q psy11267 81 FALC------PSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 81 ral~------~~~RNl~De~i~~ia~~~ 102 (103)
.+.. +.|+.+.++.++.||++.
T Consensus 224 ~G~l~~~~~~~~~~~~~~~~l~~ia~~~ 251 (326)
T 3buv_A 224 TSRNPIWVNVSSPPLLKDALLNSLGKRY 251 (326)
T ss_dssp CCCCTTTSCTTSCCGGGCHHHHHHHHHH
T ss_pred CCccccccccCCccccccHHHHHHHHHh
Confidence 4432 123345678899888763
No 178
>3a9f_A Cytochrome C; alpha helix, mono heme, electron transport; HET: HEC P33 PGE PG4; 1.30A {Chlorobaculum tepidum}
Probab=27.81 E-value=33 Score=21.43 Aligned_cols=17 Identities=18% Similarity=0.153 Sum_probs=14.6
Q ss_pred CCCCCCHHHHHHhhhhc
Q psy11267 86 SPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 86 ~~RNl~De~i~~ia~~~ 102 (103)
++-+++||+.++|+++|
T Consensus 72 pg~~Is~eda~~Iv~YL 88 (92)
T 3a9f_A 72 PGSGISDDDAKTIGIWL 88 (92)
T ss_dssp TTCCCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHH
Confidence 45789999999999987
No 179
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=27.72 E-value=1.1e+02 Score=22.97 Aligned_cols=57 Identities=23% Similarity=0.246 Sum_probs=37.4
Q ss_pred HHHHHcCccEEeeccCCCCchH------HHHHHHHhcCCeeeccCCCHHHHHHHHHhcCCCEE
Q psy11267 18 RMFYKLGVRYLTLTHACPTPWY------LVVRECNRLGMLIDLSHTSVQTMRHVLNISSAPVI 74 (103)
Q Consensus 18 ~~~y~lGvR~i~lt~n~~n~~~------~~i~~mn~lGmiiDlSH~s~~t~~d~l~~s~~Pvi 74 (103)
-..++||-..+.+.-..+...+ +.++-+.+.+=+|=+=|....+..+..+.++.|||
T Consensus 60 ~A~~~LGg~~i~l~~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVI 122 (306)
T 4ekn_B 60 TAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPII 122 (306)
T ss_dssp HHHHHTTCEEEEECCCTTTTSSSSCCHHHHHHHHHHHCSEEEEECSSTTHHHHHHHHCSSCEE
T ss_pred HHHHHcCCEEEEcCCcccccCCCCCCHHHHHHHHHHhCcEEEEEcCChHHHHHHHHhCCCCEE
Confidence 3568899888888652223333 33333333333444667788888888999999998
No 180
>1s7j_A Phenazine biosynthesis protein PHZF family; bacteria, structural PSI, protein structure initiative; 2.30A {Enterococcus faecalis} SCOP: d.21.1.2
Probab=27.70 E-value=19 Score=25.93 Aligned_cols=25 Identities=12% Similarity=0.100 Sum_probs=19.2
Q ss_pred CCccccCCCCCCCCHHHHHHhhhhc
Q psy11267 78 SSAFALCPSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 78 s~~ral~~~~RNl~De~i~~ia~~~ 102 (103)
.|..+++...+.++|+++++||+++
T Consensus 18 GNp~~Vv~~~~~l~~~~~q~ia~~~ 42 (262)
T 1s7j_A 18 GNPAAVYVLEKWLPEAVMQNIAIEN 42 (262)
T ss_dssp SEEEEEEECSSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHh
Confidence 3455566666789999999999874
No 181
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A*
Probab=27.59 E-value=36 Score=25.00 Aligned_cols=86 Identities=10% Similarity=0.040 Sum_probs=46.5
Q ss_pred CcHHHHHHHHHcC-ccEEeeccCCCCchHHHHHHHHh-cCCe--ee-----ccC-CCHHHHHHHHHhcCCCEEEecCCcc
Q psy11267 12 NSMAVLRMFYKLG-VRYLTLTHACPTPWYLVVRECNR-LGML--ID-----LSH-TSVQTMRHVLNISSAPVIFSHSSAF 81 (103)
Q Consensus 12 ~~l~~l~~~y~lG-vR~i~lt~n~~n~~~~~i~~mn~-lGmi--iD-----lSH-~s~~t~~d~l~~s~~Pvi~SHs~~r 81 (103)
.-++.|+.+++.| +|++|++-... +-++++.+ .++- .+ .+- ..+..+.+.++..+..|++--.-+.
T Consensus 140 e~~~al~~l~~~Gkir~iGvSn~~~----~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~ 215 (316)
T 3o3r_A 140 DAWEGMEELVDQGLVKALGVSNFNH----FQIERLLNKPGLKHKPVTNQVECHPYLTQEKLIQYCHSKGIAVIAYSPLGS 215 (316)
T ss_dssp HHHHHHHHHHHTTSEEEEEEESCCH----HHHHHHHTCTTCCSCCCEEEEECBTTBCCHHHHHHHHTTTCEEEEECTTCC
T ss_pred HHHHHHHHHHHcCCCcEEEEecCCH----HHHHHHHHhCCCCCCceEeeccCCcccchHHHHHHHHHcCCEEEEecccCC
Confidence 3467899999999 99999985431 22333333 2321 11 111 1234556666666666655433332
Q ss_pred cc-----CCCCCCCCHHHHHHhhhh
Q psy11267 82 AL-----CPSPRNVPDPVLKLVFPY 101 (103)
Q Consensus 82 al-----~~~~RNl~De~i~~ia~~ 101 (103)
+- ...++-+.++.+++||++
T Consensus 216 G~~~~~~~~~~~~~~~~~l~~ia~~ 240 (316)
T 3o3r_A 216 PDRPYAKPEDPVVLEIPKIKEIAAK 240 (316)
T ss_dssp TTCTTCCTTSCCSTTCHHHHHHHHH
T ss_pred CCCccccccchhhhcCHHHHHHHHH
Confidence 21 012244566778887765
No 182
>2hwj_A AGR_C_2837P, hypothetical protein ATU1540; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.61A {Agrobacterium tumefaciens str} SCOP: d.268.1.3
Probab=27.59 E-value=1.1e+02 Score=21.92 Aligned_cols=49 Identities=12% Similarity=0.169 Sum_probs=29.5
Q ss_pred CeeeccCCCHHHHHHHHHhcC--CCEEEecCCccccCCCCC---CCCHHHHHHhh
Q psy11267 50 MLIDLSHTSVQTMRHVLNISS--APVIFSHSSAFALCPSPR---NVPDPVLKLVF 99 (103)
Q Consensus 50 miiDlSH~s~~t~~d~l~~s~--~Pvi~SHs~~ral~~~~R---Nl~De~i~~ia 99 (103)
++-|+|+++...||..++.-+ .| .-.+...+....-|. .+.|+--|-++
T Consensus 87 Vi~dls~l~~~~FW~~M~~~~w~~~-~D~~G~~~~~~~LP~~l~~l~DDpyRSLa 140 (205)
T 2hwj_A 87 EVAKFSHLGKDEFWSVMDHRNLIYP-FDAQGLRRQSGDIPKNIHDLEDDPFRSLA 140 (205)
T ss_dssp EEEECTTSCHHHHHHHHHHTTCCBC-BCTTCCBCCGGGSCSSGGGCEECHHHHHH
T ss_pred EeeccCCCCHHHHHHHHHHCCCccc-cCCCcCCCChHHcchhHHhCCCCchHHHH
Confidence 378999999999999999864 22 223333333333343 34455555444
No 183
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=27.43 E-value=1.5e+02 Score=22.60 Aligned_cols=56 Identities=18% Similarity=0.095 Sum_probs=40.0
Q ss_pred HHHHHcCccEEeeccCCCCchH------HHHHHHHhcCCeeeccCCCHHHHHHHHHhcCCCEE
Q psy11267 18 RMFYKLGVRYLTLTHACPTPWY------LVVRECNRLGMLIDLSHTSVQTMRHVLNISSAPVI 74 (103)
Q Consensus 18 ~~~y~lGvR~i~lt~n~~n~~~------~~i~~mn~lGmiiDlSH~s~~t~~d~l~~s~~Pvi 74 (103)
-..++||-..+.+.-+. ..++ +.++-+.+..=+|=+=|.+..+..+..+.++.|||
T Consensus 64 ~A~~~LGg~~i~l~~~~-ss~~kgEsl~DTarvLs~~~D~IviR~~~~~~~~~lA~~~~vPVI 125 (333)
T 1duv_G 64 VAAYDQGARVTYLGPSG-SQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYASVPVW 125 (333)
T ss_dssp HHHHHTTCEEEEECSSS-SCBTTTBCHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHSSCEE
T ss_pred HHHHHcCCeEEEECCcc-ccCcCCCcHHHHHHHHHHhCCEEEEEcCCchHHHHHHHhCCCCeE
Confidence 34578888888776432 3334 55555555444556679999999999999999987
No 184
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=27.32 E-value=42 Score=25.99 Aligned_cols=53 Identities=25% Similarity=0.340 Sum_probs=37.0
Q ss_pred HHHHHHH--------HHcCccEEeec--cCC--------------CCchH------HHHHHHHhcCC--eeec--cCCCH
Q psy11267 14 MAVLRMF--------YKLGVRYLTLT--HAC--------------PTPWY------LVVRECNRLGM--LIDL--SHTSV 59 (103)
Q Consensus 14 l~~l~~~--------y~lGvR~i~lt--~n~--------------~n~~~------~~i~~mn~lGm--iiDl--SH~s~ 59 (103)
.++|+.+ .+|||-.|-|+ +.. +..|| ++|+++.++|| ++|+ .|+|.
T Consensus 30 ~~~LdyL~~~~~~~~~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~s~ 109 (488)
T 1wza_A 30 IEKLDYLNDGDPETIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGTLEDFHKLVEAAHQRGIKVIIDLPINHTSE 109 (488)
T ss_dssp HHTHHHHCCSCTTCCSSCCCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECCCSBCCT
T ss_pred HHhhhhhhccccchhhhcCccEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEeccccccC
Confidence 3578999 99999998775 211 12333 99999999886 5676 59987
Q ss_pred HH--HHHHH
Q psy11267 60 QT--MRHVL 66 (103)
Q Consensus 60 ~t--~~d~l 66 (103)
.. |.+++
T Consensus 110 ~~~~f~~~~ 118 (488)
T 1wza_A 110 RHPWFLKAS 118 (488)
T ss_dssp TSHHHHHHH
T ss_pred ccHhhhhhh
Confidence 64 45554
No 185
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=27.16 E-value=1.9e+02 Score=22.34 Aligned_cols=56 Identities=13% Similarity=-0.053 Sum_probs=38.2
Q ss_pred HHHHHcCccEEeeccCCCCchH------HHHHHHHhcCCeeeccCCCHHHHHHHHHhcCCCEE
Q psy11267 18 RMFYKLGVRYLTLTHACPTPWY------LVVRECNRLGMLIDLSHTSVQTMRHVLNISSAPVI 74 (103)
Q Consensus 18 ~~~y~lGvR~i~lt~n~~n~~~------~~i~~mn~lGmiiDlSH~s~~t~~d~l~~s~~Pvi 74 (103)
-..++||-..+.+.-+. ..++ +.++-+.+..=+|=+=|.+..+..+..+.++.|||
T Consensus 87 ~A~~~LGg~vi~l~~~~-ss~~kgEsl~DTarvLs~~~D~IviR~~~~~~~~~lA~~s~vPVI 148 (359)
T 2w37_A 87 TASIDLGAHPEYLGQND-IQLGKKESTSDTAKVLGSMFDGIEFRGFKQSDAEILARDSGVPVW 148 (359)
T ss_dssp HHHHHTTCEEEEECTTT-CCTTTSSCHHHHHHHHHHHCSEEEEESSCHHHHHHHHHHSSSCEE
T ss_pred HHHHHcCCeEEEeCCcc-ccCCCCcCHHHHHHHHHHhcCEEEEecCChHHHHHHHHhCCCCEE
Confidence 34578888888886532 3344 33333333333455668999999999999999998
No 186
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=27.11 E-value=21 Score=26.99 Aligned_cols=88 Identities=14% Similarity=0.139 Sum_probs=54.8
Q ss_pred HHHHHHHHHcCc------cEEeeccC-----CCC---chH--HHHHHHHhcCCeeeccCC------------C-----HH
Q psy11267 14 MAVLRMFYKLGV------RYLTLTHA-----CPT---PWY--LVVRECNRLGMLIDLSHT------------S-----VQ 60 (103)
Q Consensus 14 l~~l~~~y~lGv------R~i~lt~n-----~~n---~~~--~~i~~mn~lGmiiDlSH~------------s-----~~ 60 (103)
...++.+.+.|- .-+.|+|- .+| .+. ..+++ -.+-+++|-||. + ..
T Consensus 148 ~~ave~i~~~Gn~~~~~~~~i~L~erg~~y~~~~~~vdl~~i~~lk~-~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~ 226 (288)
T 3tml_A 148 KNVIDKARDAAREAGLSEDRFMACERGVSFGYNNLVSDMRSLAIMRE-TNAPVVFDATHSVQLPGGQGTSSGGQREFVPV 226 (288)
T ss_dssp HHHHHHHHHHHHTTTCCSCCEEEEECCEECSSSCEECCHHHHHHGGG-GSSCEEEEHHHHTCCCC--------CTTHHHH
T ss_pred HHHHHHHHHcCCCccCCCCcEEEEeCCCCCCCCcCcCCHHHHHHHHh-cCCcEEEcCCcccccCCcccCCCCCchhhHHH
Confidence 456677777776 55667652 222 222 33444 346678899997 4 22
Q ss_pred HHHHHHHh-cCCCEEEecCCc-cccCCCCCCCCHHHHHHhhhhc
Q psy11267 61 TMRHVLNI-SSAPVIFSHSSA-FALCPSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 61 t~~d~l~~-s~~Pvi~SHs~~-ral~~~~RNl~De~i~~ia~~~ 102 (103)
...-|+.. +..-+|=.|-.. +++++|+-.++-++++.+.+.+
T Consensus 227 ~a~AAvA~GadGl~iE~H~~pd~al~D~~~sl~p~el~~lv~~i 270 (288)
T 3tml_A 227 LARAAVATGVAGLFMETHPNPAEAKSDGPNAVPLNRMGALLETL 270 (288)
T ss_dssp HHHHHHHHCCSEEEEEEESSGGGCSSCGGGCEEGGGHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeeccChhhcCCchhhcCCHHHHHHHHHHH
Confidence 22333322 233488899665 8899999999999998887654
No 187
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=27.07 E-value=1.1e+02 Score=23.39 Aligned_cols=44 Identities=11% Similarity=0.087 Sum_probs=33.7
Q ss_pred HHHHHHHHHc-CccEEeeccCCCCch---HHHHHHHHhcCCeeeccCC
Q psy11267 14 MAVLRMFYKL-GVRYLTLTHACPTPW---YLVVRECNRLGMLIDLSHT 57 (103)
Q Consensus 14 l~~l~~~y~l-GvR~i~lt~n~~n~~---~~~i~~mn~lGmiiDlSH~ 57 (103)
++.++...+. |++++.+.|.....+ .+++++..+.|+++=.|=-
T Consensus 111 ~~ai~~a~~~~g~~Vin~S~G~~~~~~~~~~ai~~a~~~gv~vV~AAG 158 (441)
T 1y9z_A 111 VAAIDTCVNSGGANVVTMSLGGSGSTTTERNALNTHYNNGVLLIAAAG 158 (441)
T ss_dssp HHHHHHHHHTTCCSEEEECCCBSCCBHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHhcCCcEEEeCCCCCCCCHHHHHHHHHHHHCCCEEEEecC
Confidence 5678888888 999999999765443 3888888888988865533
No 188
>4dun_A Putative phenazine biosynthesis PHZC/PHZF protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: BTB; 1.76A {Clostridium difficile}
Probab=27.06 E-value=16 Score=26.87 Aligned_cols=26 Identities=12% Similarity=0.244 Sum_probs=20.3
Q ss_pred cCCccccCCCCCCCCHHHHHHhhhhc
Q psy11267 77 HSSAFALCPSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 77 Hs~~ral~~~~RNl~De~i~~ia~~~ 102 (103)
-.|.-+++.....++|+++++||+.+
T Consensus 18 ~GNp~aVv~~~~~l~~~~mq~iA~e~ 43 (263)
T 4dun_A 18 KGNPAGVCVLDRRIPLELMQKIAEEN 43 (263)
T ss_dssp CSEEEEEEEESSCCCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHh
Confidence 35666676667789999999999864
No 189
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=27.05 E-value=81 Score=23.79 Aligned_cols=58 Identities=16% Similarity=0.222 Sum_probs=39.8
Q ss_pred HHHHHHcCccEEeeccCCCCchH------HHHHHHHhcCCeeeccCCCHHHHHHHHHhcCCCEE
Q psy11267 17 LRMFYKLGVRYLTLTHACPTPWY------LVVRECNRLGMLIDLSHTSVQTMRHVLNISSAPVI 74 (103)
Q Consensus 17 l~~~y~lGvR~i~lt~n~~n~~~------~~i~~mn~lGmiiDlSH~s~~t~~d~l~~s~~Pvi 74 (103)
=-..++||-..+.+.-.....++ +.++-+.+..=+|=+=|.+.....+..+.++.|||
T Consensus 63 e~A~~~LGg~~i~l~~~~~s~~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~la~~~~vPVI 126 (308)
T 1ml4_A 63 ESAMHRLGGAVIGFAEASTSSVKKGESLRDTIKTVEQYCDVIVIRHPKEGAARLAAEVAEVPVI 126 (308)
T ss_dssp HHHHHHTTCEEEEESCGGGSGGGGTCCHHHHHHHHTTTCSEEEEEESSTTHHHHHHHTCSSCEE
T ss_pred HHHHHHhCCeEEEeCCCccccccCCCCHHHHHHHHHHhCcEEEEecCChhHHHHHHHhCCCCEE
Confidence 34568889888888655433444 44454544444444567888889999999999998
No 190
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1
Probab=26.94 E-value=25 Score=26.10 Aligned_cols=25 Identities=16% Similarity=0.484 Sum_probs=19.5
Q ss_pred ccCCcHHHHHHHHHcC-ccEEeeccC
Q psy11267 9 SLGNSMAVLRMFYKLG-VRYLTLTHA 33 (103)
Q Consensus 9 ~l~~~l~~l~~~y~lG-vR~i~lt~n 33 (103)
+++.-++.|+.+++.| ||++|++-.
T Consensus 132 ~~~e~~~al~~l~~~Gkir~iGvSn~ 157 (333)
T 1pz1_A 132 PIEETAEVMKELYDAGKIRAIGVSNF 157 (333)
T ss_dssp CHHHHHHHHHHHHHTTSBSCEEECSC
T ss_pred CHHHHHHHHHHHHHCCcCCEEEecCC
Confidence 3444577899999999 999999854
No 191
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=26.93 E-value=2.1e+02 Score=21.82 Aligned_cols=84 Identities=12% Similarity=0.053 Sum_probs=48.7
Q ss_pred cHHHHHHHH----HcCccEEeec--cCC-----CCchHHHHHHHHhcCCeeeccCCC------HHHHHHHHHh---cCCC
Q psy11267 13 SMAVLRMFY----KLGVRYLTLT--HAC-----PTPWYLVVRECNRLGMLIDLSHTS------VQTMRHVLNI---SSAP 72 (103)
Q Consensus 13 ~l~~l~~~y----~lGvR~i~lt--~n~-----~n~~~~~i~~mn~lGmiiDlSH~s------~~t~~d~l~~---s~~P 72 (103)
+++.+..+. +.|+..+... |.. +..+-++.+.+.+.|.++-+ |+- ..++.++++. +..|
T Consensus 165 ~l~~m~~l~~~~~~~Ga~g~~~~~~y~p~~~~~~~el~~~~~~a~~~g~~v~~-H~~~~~~~~~~a~~e~i~la~~~g~~ 243 (480)
T 3gip_A 165 EQQAMQDMLQAALEAGAVGFSTGLAYQPGAVAQAAELEGLARVAAERRRLHTS-HIRNEADGVEAAVEEVLAIGRGTGCA 243 (480)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEETTSTTGGGCCHHHHHHHHHHHHHTTCEEEE-ECSCSSTTHHHHHHHHHHHHHHHCCE
T ss_pred HHHHHHHHHHHHHHCCCcEEeecCccCCcccCCHHHHHHHHHHHHHcCCEEEE-EecCccccHHHHHHHHHHHHHHhCCC
Confidence 455555555 5787766543 321 01112677788889988874 775 3455555555 4789
Q ss_pred EEEecCCccccCCCCCCCCHHHHHHhh
Q psy11267 73 VIFSHSSAFALCPSPRNVPDPVLKLVF 99 (103)
Q Consensus 73 vi~SHs~~ral~~~~RNl~De~i~~ia 99 (103)
+.++|..+..-.+. ..+.+.+..|.
T Consensus 244 v~i~H~s~~~~~~~--~~~~~~l~~i~ 268 (480)
T 3gip_A 244 TVVSHHKCMMPQNW--GRSRATLANID 268 (480)
T ss_dssp EEETTCCCCSGGGT--TTHHHHHHHHH
T ss_pred EEEEEEeccCccch--hhHHHHHHHHH
Confidence 99999887542221 12555555553
No 192
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=26.93 E-value=54 Score=24.07 Aligned_cols=74 Identities=11% Similarity=0.048 Sum_probs=46.4
Q ss_pred cCCcHHHHHHHHHcC-ccEEeeccCCCCchHHHHHHHHhcCC-eeecc----CC----CHHHHHHHHHhcCCCEEEecCC
Q psy11267 10 LGNSMAVLRMFYKLG-VRYLTLTHACPTPWYLVVRECNRLGM-LIDLS----HT----SVQTMRHVLNISSAPVIFSHSS 79 (103)
Q Consensus 10 l~~~l~~l~~~y~lG-vR~i~lt~n~~n~~~~~i~~mn~lGm-iiDlS----H~----s~~t~~d~l~~s~~Pvi~SHs~ 79 (103)
++.-++.|+.+++.| ||++|++-.....+.++++.+.+.|. -+++- |. .+..+.+.++.....|++--.-
T Consensus 117 ~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~g~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL 196 (327)
T 1gve_A 117 IEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLCKKNGWIMPTVYQGMYNAITRQVETELFPCLRHFGLRFYAFNPL 196 (327)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTT
T ss_pred HHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHcCCCCeEEEeccCcceecccHHHHHHHHHHcCCeEEEeccc
Confidence 444567899999999 99999986543334466666666663 33331 11 1245667777778887766555
Q ss_pred cccc
Q psy11267 80 AFAL 83 (103)
Q Consensus 80 ~ral 83 (103)
+.++
T Consensus 197 ~~G~ 200 (327)
T 1gve_A 197 AGGL 200 (327)
T ss_dssp GGGG
T ss_pred cccc
Confidence 5543
No 193
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Probab=26.78 E-value=1.9e+02 Score=21.22 Aligned_cols=88 Identities=9% Similarity=-0.005 Sum_probs=51.7
Q ss_pred CCcHHHHHHHHHcC-ccEEeeccCCCCchHHHHHHHHhc-CC--eeec--cCC----CHHHHHHHHHhcCCCEEEecCCc
Q psy11267 11 GNSMAVLRMFYKLG-VRYLTLTHACPTPWYLVVRECNRL-GM--LIDL--SHT----SVQTMRHVLNISSAPVIFSHSSA 80 (103)
Q Consensus 11 ~~~l~~l~~~y~lG-vR~i~lt~n~~n~~~~~i~~mn~l-Gm--iiDl--SH~----s~~t~~d~l~~s~~Pvi~SHs~~ 80 (103)
..-++.|+.+++.| ||++|++-.. .+.++++.+. ++ ..++ -.. -...+.+.+......|++--.-+
T Consensus 145 ~e~~~ale~l~~~Gkir~iGvSn~~----~~~l~~~~~~~~~~~~p~v~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~ 220 (331)
T 1s1p_A 145 CTTWEAMEKCKDAGLAKSIGVSNFN----RRQLEMILNKPGLKYKPVCNQVECHPYFNRSKLLDFCKSKDIVLVAYSALG 220 (331)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCC----HHHHHHHHTCTTCCCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTS
T ss_pred HHHHHHHHHHHHcCCccEEEEeCCC----HHHHHHHHHhcCccCCCceeeeecCCCcChHHHHHHHHHcCCEEEEecccc
Confidence 34467899999999 9999998542 1234444332 33 1121 111 12456666777777777655544
Q ss_pred cccC------CCCCCCCHHHHHHhhhhc
Q psy11267 81 FALC------PSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 81 ral~------~~~RNl~De~i~~ia~~~ 102 (103)
.+.. +.|+-+.++.+++||++.
T Consensus 221 ~G~l~~~~~~~~~~~~~~~~l~~ia~~~ 248 (331)
T 1s1p_A 221 SQRDKRWVDPNSPVLLEDPVLCALAKKH 248 (331)
T ss_dssp CCCCTTTSCTTSCCGGGCHHHHHHHHHH
T ss_pred CCcccccccCCCcccccCHHHHHHHHHh
Confidence 4432 123445678899988763
No 194
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron}
Probab=26.58 E-value=56 Score=25.14 Aligned_cols=38 Identities=8% Similarity=0.141 Sum_probs=27.8
Q ss_pred HHHHHHHcCccEEeeccCCCCc---------------------hHHHHHHHHhcCCeee
Q psy11267 16 VLRMFYKLGVRYLTLTHACPTP---------------------WYLVVRECNRLGMLID 53 (103)
Q Consensus 16 ~l~~~y~lGvR~i~lt~n~~n~---------------------~~~~i~~mn~lGmiiD 53 (103)
.++.+.+.|++++-|++..... .+++++.+.+.||=|=
T Consensus 59 ~~~~mK~~GikyvIl~~~~~~gf~~~pS~~~~~~~~~~p~~Dlv~~~l~aa~k~Gmkv~ 117 (340)
T 4h41_A 59 DFQHMKRIGIDTVIMIRSGYRKFMTYPSPYLLKKGCYMPSVDLVDMYLRLAEKYNMKFY 117 (340)
T ss_dssp HHHHHHHTTCCEEEESCSEETTEESSCCHHHHHTTCCCCSBCHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHcCCCEEEEEEEeeCCeeccCcccccccCccCCcccHHHHHHHHHHHhCCeEE
Confidence 3677789999999998853221 1277888899999763
No 195
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=26.52 E-value=2.1e+02 Score=21.55 Aligned_cols=52 Identities=19% Similarity=0.211 Sum_probs=29.2
Q ss_pred HHHHHHHhcCCeeeccCCCH--HHHHHHHHhc--------------CCCEEEecCCccccCCCCCCCCHHHHHHhhhh
Q psy11267 40 LVVRECNRLGMLIDLSHTSV--QTMRHVLNIS--------------SAPVIFSHSSAFALCPSPRNVPDPVLKLVFPY 101 (103)
Q Consensus 40 ~~i~~mn~lGmiiDlSH~s~--~t~~d~l~~s--------------~~Pvi~SHs~~ral~~~~RNl~De~i~~ia~~ 101 (103)
++++...+.|+.+.+ |+++ ..+.++++.. ..++++.|. -.+++++++.++++
T Consensus 213 ~~~~~A~~~g~~v~i-H~~e~~~~~~~~~~~~g~~~i~~~~~~g~~~~~~~~~H~---------~~l~~~~i~~l~~~ 280 (472)
T 4dzh_A 213 RVRMLADQLDMPVHL-HTHETAQEVADSVAQYGQRPLARLDRLGLVNDRLIAVHM---------TQLTEAEIHLCAER 280 (472)
T ss_dssp HHHHHHHHHTCCEEE-EESCCHHHHHHHHHHHSSCHHHHHHHHTCCSTTEEEEEC---------CSCCHHHHHHHHHH
T ss_pred HHHHHHHHCCCeEEE-EeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEec---------cCCCHHHHHHHHHc
Confidence 566666666777766 7653 2233333321 123344444 35788888888764
No 196
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=26.11 E-value=1.6e+02 Score=20.03 Aligned_cols=68 Identities=13% Similarity=0.116 Sum_probs=44.8
Q ss_pred HHHHHHHHHcCccEEeeccCC-------CCchHHHHHHHHhcCCeeeccCC-------CH---HHHHHHHHhc---CCCE
Q psy11267 14 MAVLRMFYKLGVRYLTLTHAC-------PTPWYLVVRECNRLGMLIDLSHT-------SV---QTMRHVLNIS---SAPV 73 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n~-------~n~~~~~i~~mn~lGmiiDlSH~-------s~---~t~~d~l~~s---~~Pv 73 (103)
.+.++...++|+..+.+.... .....++-+.+.+.|+-+-.-|+ .+ +.+.++++.+ ..|.
T Consensus 22 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~ 101 (272)
T 2q02_A 22 EAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGARA 101 (272)
T ss_dssp HHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhccCCcHHHHHHHHHHHHHHHHHhCCCE
Confidence 357888999999999997421 12233788888999997743342 22 2344555554 6898
Q ss_pred EEecCCcc
Q psy11267 74 IFSHSSAF 81 (103)
Q Consensus 74 i~SHs~~r 81 (103)
|..|++..
T Consensus 102 v~~~~g~~ 109 (272)
T 2q02_A 102 LVLCPLND 109 (272)
T ss_dssp EEECCCCS
T ss_pred EEEccCCC
Confidence 88887743
No 197
>2xts_B Cytochrome; oxidoreductase-electron transport complex, SOX system, sulfa oxidation, molybdenum cofactor, heme, electron transfer; HET: MTE HEC; 1.33A {Paracoccus pantotrophus}
Probab=26.07 E-value=36 Score=23.83 Aligned_cols=17 Identities=12% Similarity=0.118 Sum_probs=14.8
Q ss_pred CCCCCCHHHHHHhhhhc
Q psy11267 86 SPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 86 ~~RNl~De~i~~ia~~~ 102 (103)
....|||+++++|++||
T Consensus 101 ~~~~LsdeEi~aL~aYl 117 (205)
T 2xts_B 101 SAQTLSVDDTYAITAFL 117 (205)
T ss_dssp SCSCCCHHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHH
Confidence 45689999999999987
No 198
>1hro_A Cytochrome C2; electron transport, photosynthesis, heme; HET: HEM; 2.20A {Rhodopila globiformis} SCOP: a.3.1.1
Probab=26.01 E-value=31 Score=20.76 Aligned_cols=15 Identities=13% Similarity=0.115 Sum_probs=12.4
Q ss_pred CCCHHHHHHhhhhcC
Q psy11267 89 NVPDPVLKLVFPYLT 103 (103)
Q Consensus 89 Nl~De~i~~ia~~~~ 103 (103)
-++|+++++|+++|.
T Consensus 89 ~~~~~ei~~l~aYl~ 103 (106)
T 1hro_A 89 QPDPQKRADIIAYLE 103 (106)
T ss_dssp CCCHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHH
Confidence 347999999999873
No 199
>1i54_A Cytochrome C; zinc-porphyrin, mixed-metal, electron transport; HET: HEM ZNH; 1.50A {Thunnus thynnus} SCOP: a.3.1.1 PDB: 1i55_A* 1lfm_A* 5cyt_R* 3cyt_O* 1cyc_A* 2aiu_A* 2b4z_A* 2ybb_Y* 1akk_A* 1fi7_A* 1fi9_A* 1giw_A* 1i5t_A* 1lc1_A* 1lc2_A* 1m60_A* 1ocd_A* 1u75_B* 2frc_A* 2giw_A* ...
Probab=25.88 E-value=38 Score=20.00 Aligned_cols=15 Identities=13% Similarity=0.193 Sum_probs=12.6
Q ss_pred CCCC-HHHHHHhhhhc
Q psy11267 88 RNVP-DPVLKLVFPYL 102 (103)
Q Consensus 88 RNl~-De~i~~ia~~~ 102 (103)
..++ |+++++|+++|
T Consensus 83 ~~l~~~~ei~~l~aYl 98 (103)
T 1i54_A 83 AGIKKKGERQDLVAYL 98 (103)
T ss_dssp CCCCCHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHH
Confidence 4575 99999999987
No 200
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=25.82 E-value=41 Score=25.93 Aligned_cols=49 Identities=22% Similarity=0.316 Sum_probs=34.9
Q ss_pred HHHHHHHHHcCccEEeec--cCC-CC--------------chH------HHHHHHHhcCC--eeec--cCCCHHHH
Q psy11267 14 MAVLRMFYKLGVRYLTLT--HAC-PT--------------PWY------LVVRECNRLGM--LIDL--SHTSVQTM 62 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt--~n~-~n--------------~~~------~~i~~mn~lGm--iiDl--SH~s~~t~ 62 (103)
.++|+.+.+|||-.|-|+ +.. .. .|| ++|+++.++|| ++|+ .|+|+..-
T Consensus 35 ~~kLdYLk~LGvt~I~L~Pi~~~~~~~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~NHts~~~~ 110 (549)
T 4aie_A 35 ISRLDYLEKLGIDAIWLSPVYQSPGVDNGYDISDYEAIDPQYGTMADMDELISKAKEHHIKIVMDLVVNHTSDQHK 110 (549)
T ss_dssp HTTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSH
T ss_pred HHhhHHHHHCCCCEEEeCCCcCCCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEECccCCcCCcc
Confidence 357889999999987654 221 11 222 99999999887 7787 68987653
No 201
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=25.78 E-value=89 Score=22.38 Aligned_cols=42 Identities=19% Similarity=0.228 Sum_probs=30.6
Q ss_pred HHHHHHHHHcCccEEeeccCCCCc---hHHHHHHHHhcCCeeecc
Q psy11267 14 MAVLRMFYKLGVRYLTLTHACPTP---WYLVVRECNRLGMLIDLS 55 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n~~n~---~~~~i~~mn~lGmiiDlS 55 (103)
++.++...+.|++.+.+.|..... +.+.+++..+.|+++=.|
T Consensus 106 ~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~ai~~a~~~gv~vV~A 150 (269)
T 1gci_A 106 AQGLEWAGNNGMHVANLSLGSPSPSATLEQAVNSATSRGVLVVAA 150 (269)
T ss_dssp HHHHHHHHHTTCSEEEECCCBSSCCHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCHHHHHHHHHHHHCCCEEEEe
Confidence 345677788999999999965432 347788888888877544
No 202
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=25.77 E-value=1.6e+02 Score=20.12 Aligned_cols=68 Identities=12% Similarity=0.094 Sum_probs=42.9
Q ss_pred HHHHHHHHHcCccEEeeccCCCCc----------hHHHHHHHHhcCCee-----------eccCCCHH-------HHHHH
Q psy11267 14 MAVLRMFYKLGVRYLTLTHACPTP----------WYLVVRECNRLGMLI-----------DLSHTSVQ-------TMRHV 65 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n~~n~----------~~~~i~~mn~lGmii-----------DlSH~s~~-------t~~d~ 65 (103)
.+.++...++|+..+.+....... ..++-+.+.+.|+-+ ++++..+. .+.++
T Consensus 15 ~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~h~~~~~~~~~~~~~~r~~~~~~~~~~ 94 (287)
T 2x7v_A 15 DRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDWENAFCHSGYLINLASPKDDIWQKSVELLKKE 94 (287)
T ss_dssp GGHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCGGGEEEECCTTCCTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCCcceeEEecccccccCCCCHHHHHHHHHHHHHH
Confidence 357899999999999994322111 126777788888852 33333332 34444
Q ss_pred HHhc---CCCEEEecCCcc
Q psy11267 66 LNIS---SAPVIFSHSSAF 81 (103)
Q Consensus 66 l~~s---~~Pvi~SHs~~r 81 (103)
++.+ ..|.|..|++..
T Consensus 95 i~~A~~lG~~~v~~~~g~~ 113 (287)
T 2x7v_A 95 VEICRKLGIRYLNIHPGSH 113 (287)
T ss_dssp HHHHHHHTCCEEEECCEEC
T ss_pred HHHHHHcCCCEEEEecCCC
Confidence 4444 689999998754
No 203
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=25.74 E-value=87 Score=22.47 Aligned_cols=42 Identities=10% Similarity=0.042 Sum_probs=29.7
Q ss_pred HHHHHHHHHcCccEEeeccCCCC---chHHHHHHHHhcCCeeecc
Q psy11267 14 MAVLRMFYKLGVRYLTLTHACPT---PWYLVVRECNRLGMLIDLS 55 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n~~n---~~~~~i~~mn~lGmiiDlS 55 (103)
++.++...+.|++++.+.|.... .+.+++++..+.|+++=.|
T Consensus 116 ~~ai~~a~~~g~~Vin~S~G~~~~~~~l~~ai~~a~~~gvlvV~A 160 (279)
T 1thm_A 116 ANGITYAADQGAKVISLSLGGTVGNSGLQQAVNYAWNKGSVVVAA 160 (279)
T ss_dssp HHHHHHHHHTTCSEEEECCCBSSCCHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHCCCCEEEEecCCCCCCHHHHHHHHHHHHCCCEEEEe
Confidence 34567778899999999996532 2337777777777776544
No 204
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=25.68 E-value=1.9e+02 Score=21.82 Aligned_cols=56 Identities=16% Similarity=0.029 Sum_probs=38.9
Q ss_pred HHHHHcCccEEeeccCCCCchH------HHHHHHHhcCCeeeccCCCHHHHHHHHHhcCCCEE
Q psy11267 18 RMFYKLGVRYLTLTHACPTPWY------LVVRECNRLGMLIDLSHTSVQTMRHVLNISSAPVI 74 (103)
Q Consensus 18 ~~~y~lGvR~i~lt~n~~n~~~------~~i~~mn~lGmiiDlSH~s~~t~~d~l~~s~~Pvi 74 (103)
-..++||-..+.+.-+. ..++ +.++-+.+..=+|=+=|.+..+..+..+.++.|||
T Consensus 66 ~A~~~LGg~~i~l~~~~-ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVI 127 (321)
T 1oth_A 66 TGFALLGGHPCFLTTQD-IHLGVNESLTDTARVLSSMADAVLARVYKQSDLDTLAKEASIPII 127 (321)
T ss_dssp HHHHHTTCEEEEEETTT-SCBTTTBCHHHHHHHHHHHCSEEEEECSCHHHHHHHHHHCSSCEE
T ss_pred HHHHHcCCeEEEECCCc-CcCCCCCCHHHHHHHHHHhCCEEEEeCCChhHHHHHHHhCCCCEE
Confidence 34578888888886543 3333 44444444444555678899999999999999987
No 205
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=25.65 E-value=1e+02 Score=22.18 Aligned_cols=45 Identities=11% Similarity=0.098 Sum_probs=33.3
Q ss_pred HHHHHHHHHcCccEEeeccCCCC---chHHHHHHHHhcCCeeeccCCC
Q psy11267 14 MAVLRMFYKLGVRYLTLTHACPT---PWYLVVRECNRLGMLIDLSHTS 58 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n~~n---~~~~~i~~mn~lGmiiDlSH~s 58 (103)
++.++...+.|++++.+.|.... .+.+++++..+.|+++=.|=-+
T Consensus 117 ~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~ai~~a~~~gilvV~AAGN 164 (280)
T 1dbi_A 117 ADAIIYAADSGAEVINLSLGCDCHTTTLENAVNYAWNKGSVVVAAAGN 164 (280)
T ss_dssp HHHHHHHHHTTCSEEEECCSSCCCCHHHHHHHHHHHHTTCEEEEECCB
T ss_pred HHHHHHHHHCCCCEEEeCCCCCCCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 34667778899999999997643 3448888888889888665443
No 206
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=25.45 E-value=2.1e+02 Score=21.27 Aligned_cols=67 Identities=9% Similarity=0.138 Sum_probs=43.6
Q ss_pred HHHHHHHHHcCccEEeeccCCC-----C------chHHHHHHHHhcCCeeeccC----------------CCH-------
Q psy11267 14 MAVLRMFYKLGVRYLTLTHACP-----T------PWYLVVRECNRLGMLIDLSH----------------TSV------- 59 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n~~-----n------~~~~~i~~mn~lGmiiDlSH----------------~s~------- 59 (103)
.+.++...++|+..+.+..... + ...++-+.+.+.|+-+-.-| ..+
T Consensus 36 ~e~l~~aa~~G~~~VEl~~~~~~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~~~~~~~~~p~~~~g~l~~~d~~~r~~~i 115 (386)
T 1muw_A 36 VETVQRLAELGAHGVTFHDDDLIPFGSSDTERESHIKRFRQALDATGMTVPMATTNLFTHPVFKDGGFTANDRDVRRYAL 115 (386)
T ss_dssp HHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCCEEECCCSSSGGGTTCSTTCSSHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeeCCCCCcccCcccccHHHHHHHHHHHHHhCCeEEEEecccccccccccCCCCCCCHHHHHHHH
Confidence 4688899999999999875311 1 11267777888888664433 222
Q ss_pred HHHHHHHHhc---CCCEEEecCCc
Q psy11267 60 QTMRHVLNIS---SAPVIFSHSSA 80 (103)
Q Consensus 60 ~t~~d~l~~s---~~Pvi~SHs~~ 80 (103)
+.+.++++.+ ..|.|..|++.
T Consensus 116 ~~~~~~i~~A~~LGa~~vvv~~g~ 139 (386)
T 1muw_A 116 RKTIRNIDLAVELGAKTYVAWGGR 139 (386)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCTT
T ss_pred HHHHHHHHHHHHhCCCEEEECCCC
Confidence 2344455554 68989889874
No 207
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=25.44 E-value=1.4e+02 Score=22.52 Aligned_cols=58 Identities=17% Similarity=0.052 Sum_probs=40.7
Q ss_pred HHHHHcCccEEeeccCC-----CCchHHHHHHHHhcCCeeeccCCCHHHHHHHHHhcCCCEEE
Q psy11267 18 RMFYKLGVRYLTLTHAC-----PTPWYLVVRECNRLGMLIDLSHTSVQTMRHVLNISSAPVIF 75 (103)
Q Consensus 18 ~~~y~lGvR~i~lt~n~-----~n~~~~~i~~mn~lGmiiDlSH~s~~t~~d~l~~s~~Pvi~ 75 (103)
-..++||-..+.+.-+. .....+.++-+.+..=+|=+=|.+..+..+..+.++.|||=
T Consensus 66 ~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVIN 128 (315)
T 1pvv_A 66 VAMAHLGGHALYLNAQDLQLRRGETIADTARVLSRYVDAIMARVYDHKDVEDLAKYATVPVIN 128 (315)
T ss_dssp HHHHHTTSEEEEEEGGGSTTTTTCCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEEE
T ss_pred HHHHHcCCeEEEECCccccCCCCcCHHHHHHHHHHhCcEEEEecCchHHHHHHHHhCCCCEEc
Confidence 34578888888876432 12233555555555555666799999999999999999984
No 208
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=25.21 E-value=70 Score=24.50 Aligned_cols=46 Identities=13% Similarity=0.167 Sum_probs=31.6
Q ss_pred HH-HHHHHHcCccEEeeccCC-------------------CCchH------HHHHHHHhcCC--eeec--cCCCHH
Q psy11267 15 AV-LRMFYKLGVRYLTLTHAC-------------------PTPWY------LVVRECNRLGM--LIDL--SHTSVQ 60 (103)
Q Consensus 15 ~~-l~~~y~lGvR~i~lt~n~-------------------~n~~~------~~i~~mn~lGm--iiDl--SH~s~~ 60 (103)
+. |+.+.+|||-.|.|+=-. +..|| ++|+++.+.|| ++|+ -|++..
T Consensus 18 ~~lldyL~~LGv~~I~l~Pi~~~~~~~~~~~gY~~~~y~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~NH~~~~ 93 (448)
T 1g94_A 18 QECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSYELQSRGGNRAQFIDMVNRCSAAGVDIYVDTLINHMAAG 93 (448)
T ss_dssp HHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEEEECSEECSS
T ss_pred HHHHHHHHHcCCCEEEECCccccCCCCCCcccccccccccCCCCCCHHHHHHHHHHHHHCCCEEEEEEeeccccCC
Confidence 35 478899999998876210 12233 99999999886 5665 577654
No 209
>1xub_A Phenazine biosynthesis protein PHZF; biosynthetic protein; 1.30A {Pseudomonas fluorescens} SCOP: d.21.1.2 d.21.1.2 PDB: 1u1w_A* 1u1v_A* 1u1x_A* 1xua_A* 1t6k_A
Probab=25.13 E-value=17 Score=26.73 Aligned_cols=25 Identities=8% Similarity=0.183 Sum_probs=20.6
Q ss_pred CCccccCCCCCCCCHHHHHHhhhhc
Q psy11267 78 SSAFALCPSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 78 s~~ral~~~~RNl~De~i~~ia~~~ 102 (103)
.|..+++...+.++|+++++||+++
T Consensus 37 GNp~aVv~~~~~l~~~~mq~IA~e~ 61 (298)
T 1xub_A 37 GNPVAVFFDADDLPPAQMQRIAREM 61 (298)
T ss_dssp SEEEEEECSGGGSCHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHh
Confidence 3677777777899999999999874
No 210
>3lqv_P Splicing factor 3B subunit 1; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} PDB: 2f9d_P 2f9j_P
Probab=24.77 E-value=41 Score=18.27 Aligned_cols=15 Identities=27% Similarity=0.414 Sum_probs=11.4
Q ss_pred CCCCCCCHHHHHHhh
Q psy11267 85 PSPRNVPDPVLKLVF 99 (103)
Q Consensus 85 ~~~RNl~De~i~~ia 99 (103)
...|-+|||++.++-
T Consensus 18 ~RNrpltDEeLD~mL 32 (39)
T 3lqv_P 18 ERNRPLSDEELDAMF 32 (39)
T ss_dssp HTTCCCCHHHHHHTC
T ss_pred hhcCCCCHHHHHHhC
Confidence 356778999998763
No 211
>3n8k_A 3-dehydroquinate dehydratase; shikimate pathway, lyase, aromatic amino acid biosynthesis, drug target, citrazinic acid, S genomics; HET: D1X; 2.25A {Mycobacterium tuberculosis} PDB: 3n59_A*
Probab=24.67 E-value=1e+02 Score=21.75 Aligned_cols=53 Identities=25% Similarity=0.280 Sum_probs=38.1
Q ss_pred HHcCccEEeeccCCCCchHHHHHHHHh-----cCCeee---ccCCCHHHHHHHHHhcCCCEEEec
Q psy11267 21 YKLGVRYLTLTHACPTPWYLVVRECNR-----LGMLID---LSHTSVQTMRHVLNISSAPVIFSH 77 (103)
Q Consensus 21 y~lGvR~i~lt~n~~n~~~~~i~~mn~-----lGmiiD---lSH~s~~t~~d~l~~s~~Pvi~SH 77 (103)
-++|+ .+.+...|.=|++|..+.+ -|++|+ .+|.|. +.+||+...+.|+|=-|
T Consensus 67 ~~~G~---~l~~~QSN~EGeLId~Ih~A~~~~dgIIINPgAyTHtSv-AlrDAL~~v~~P~VEVH 127 (172)
T 3n8k_A 67 AELGL---KAVVRQSDSEAQLLDWIHQAADAAEPVILNAGGLTHTSV-ALRDACAELSAPLIEVH 127 (172)
T ss_dssp HHTTC---EEEEEECSCHHHHHHHHHHHHHHTCCEEEECGGGGGTCH-HHHHHHTTCCSCEEEEE
T ss_pred HHcCC---EEEEEecCCHHHHHHHHHHhhhcCcEEEECcchhhhhhH-HHHHHHHhCCCCEEEEE
Confidence 34564 4455555666766666644 578887 579998 78999999999999666
No 212
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=24.62 E-value=71 Score=23.52 Aligned_cols=35 Identities=11% Similarity=-0.059 Sum_probs=28.3
Q ss_pred hcCCeeeccCCCH--HHHHHHHHhcCCCEEEecCCcc
Q psy11267 47 RLGMLIDLSHTSV--QTMRHVLNISSAPVIFSHSSAF 81 (103)
Q Consensus 47 ~lGmiiDlSH~s~--~t~~d~l~~s~~Pvi~SHs~~r 81 (103)
-..|+-|+|-..+ ..+.+++..+..|+|+.|..-+
T Consensus 100 Ga~iINdvs~~~d~~~~~~~~~a~~~~~vv~m~~d~~ 136 (271)
T 2yci_X 100 GHAMINSTSADQWKMDIFFPMAKKYEAAIIGLTMNEK 136 (271)
T ss_dssp SCCEEEEECSCHHHHHHHHHHHHHHTCEEEEESCBTT
T ss_pred CCCEEEECCCCccccHHHHHHHHHcCCCEEEEecCCC
Confidence 4568889998876 6788888889999999997533
No 213
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=24.47 E-value=1.1e+02 Score=22.31 Aligned_cols=22 Identities=14% Similarity=0.178 Sum_probs=16.3
Q ss_pred CcHHHHHHHHHcC-ccEEeeccC
Q psy11267 12 NSMAVLRMFYKLG-VRYLTLTHA 33 (103)
Q Consensus 12 ~~l~~l~~~y~lG-vR~i~lt~n 33 (103)
.-++.|+.+++.| ||++|++-.
T Consensus 170 e~~~al~~l~~~Gkir~iGvSn~ 192 (292)
T 4exb_A 170 EVYPTLAALKREGLIGAYGLSGK 192 (292)
T ss_dssp SHHHHHHHHHHTTSEEEEEEECS
T ss_pred HHHHHHHHHHHCCCceEEEeCCC
Confidence 3466788888888 888888753
No 214
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=24.17 E-value=1.1e+02 Score=21.90 Aligned_cols=42 Identities=7% Similarity=0.109 Sum_probs=30.6
Q ss_pred HHHHHHHHHcCccEEeeccCCCC---chHHHHHHHHhcCCeeecc
Q psy11267 14 MAVLRMFYKLGVRYLTLTHACPT---PWYLVVRECNRLGMLIDLS 55 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n~~n---~~~~~i~~mn~lGmiiDlS 55 (103)
++.++...+.|++.+.+.|.... .+.+.+++..+.|+++=.|
T Consensus 107 ~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~ai~~a~~~gi~vV~A 151 (274)
T 1r0r_E 107 VSGIEWATTNGMDVINMSLGGASGSTAMKQAVDNAYARGVVVVAA 151 (274)
T ss_dssp HHHHHHHHHTTCSEEEECEEBSSCCHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCCcHHHHHHHHHHHHCCCEEEEe
Confidence 45677778899999999996533 3447777777788776544
No 215
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=24.16 E-value=1.3e+02 Score=22.18 Aligned_cols=52 Identities=12% Similarity=0.153 Sum_probs=29.5
Q ss_pred HHHHHHHhcCCeeeccCCCHH--HHHHHHHhc--------------CCCEEEecCCccccCCCCCCCCHHHHHHhhhh
Q psy11267 40 LVVRECNRLGMLIDLSHTSVQ--TMRHVLNIS--------------SAPVIFSHSSAFALCPSPRNVPDPVLKLVFPY 101 (103)
Q Consensus 40 ~~i~~mn~lGmiiDlSH~s~~--t~~d~l~~s--------------~~Pvi~SHs~~ral~~~~RNl~De~i~~ia~~ 101 (103)
++++...+.|+.+.+ |+++. ...++++.. ..++++.| --.+++++++.++++
T Consensus 206 ~~~~~A~~~g~~v~~-H~~e~~~~~~~~~~~~g~~~i~~~~~~g~~~~~~~~~H---------~~~~~~~~~~~l~~~ 273 (451)
T 4dyk_A 206 QILVLTEELDASIQM-HVHETAFEVEQAMERNGERPLARLHRLGLLGPRFQAVH---------MTQVDNDDLAMLVET 273 (451)
T ss_dssp HHHHHHHHHTCCEEE-EESCCHHHHHHHHHHHSSCHHHHHHHTTCCSTTEEEEE---------CCCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEE-EeCCCHHHHHHHHHHhCCCHHHHHHHCCCCCCCeEEEE---------CCCCCHHHHHHHHHc
Confidence 666666677777776 66543 333333322 12233444 345788888888764
No 216
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=24.12 E-value=1.1e+02 Score=21.99 Aligned_cols=42 Identities=7% Similarity=0.121 Sum_probs=30.6
Q ss_pred HHHHHHHHHcCccEEeeccCCCC---chHHHHHHHHhcCCeeecc
Q psy11267 14 MAVLRMFYKLGVRYLTLTHACPT---PWYLVVRECNRLGMLIDLS 55 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n~~n---~~~~~i~~mn~lGmiiDlS 55 (103)
++.++...+.|++++.+.|.... .+.+.+++..+.|+++=.|
T Consensus 108 ~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~ai~~a~~~gi~vV~A 152 (281)
T 1to2_E 108 INGIEWAIANNMDVINMSLGGPSGSAALKAAVDKAVASGVVVVAA 152 (281)
T ss_dssp HHHHHHHHHTTCSEEEECEEBSCCCHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHCCCcEEEECCcCCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 44677788999999999996543 3447777777778777544
No 217
>1qya_A ORFB, hypothetical protein YDDE; putative phenazine biosynthesis protein, epimerase, antibiot biosynthesis protein, structural genomics; 2.00A {Escherichia coli} SCOP: d.21.1.2 d.21.1.2 PDB: 1sdj_A 1qy9_A
Probab=24.11 E-value=24 Score=25.83 Aligned_cols=25 Identities=12% Similarity=0.215 Sum_probs=19.9
Q ss_pred CCccccCCCCCCCCHHHHHHhhhhc
Q psy11267 78 SSAFALCPSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 78 s~~ral~~~~RNl~De~i~~ia~~~ 102 (103)
.|..+++...+.++++++++||+++
T Consensus 28 GNp~aVv~~~~~l~~~~mq~iA~e~ 52 (307)
T 1qya_A 28 GNSAGVVFPADNLSEAQMQLIAREL 52 (307)
T ss_dssp SEEEEEEECCTTCCHHHHHHHHHHH
T ss_pred cceeEEEeCCCCCCHHHHHHHHHHh
Confidence 4566677667789999999999874
No 218
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=23.99 E-value=83 Score=22.98 Aligned_cols=62 Identities=13% Similarity=0.138 Sum_probs=44.0
Q ss_pred HHHHHHHhcCCeeeccCC---CHHHHHHHHHhc----CCCEEEecCCccccCCCCCCCCH-HHHHHhhhh
Q psy11267 40 LVVRECNRLGMLIDLSHT---SVQTMRHVLNIS----SAPVIFSHSSAFALCPSPRNVPD-PVLKLVFPY 101 (103)
Q Consensus 40 ~~i~~mn~lGmiiDlSH~---s~~t~~d~l~~s----~~Pvi~SHs~~ral~~~~RNl~D-e~i~~ia~~ 101 (103)
.+++++.+.|+.|=++-- +..-+.++++.. +..++.-|.+.+...+-+++--| ..+..+.++
T Consensus 121 ~ll~~~a~~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~ 190 (262)
T 1zco_A 121 ELLKEVGKVENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKEL 190 (262)
T ss_dssp HHHHHHTTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHH
T ss_pred HHHHHHHhcCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhh
Confidence 689999999999998864 455566666553 45699999886665566777666 666665543
No 219
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1
Probab=23.68 E-value=81 Score=23.13 Aligned_cols=74 Identities=14% Similarity=0.191 Sum_probs=45.2
Q ss_pred ccCCcHHHHHHHHHcC-ccEEeeccCCCCchHHHHHHHHhcCCe-eec-----cCCC---HHHHHHHHHhcCCCEEEecC
Q psy11267 9 SLGNSMAVLRMFYKLG-VRYLTLTHACPTPWYLVVRECNRLGML-IDL-----SHTS---VQTMRHVLNISSAPVIFSHS 78 (103)
Q Consensus 9 ~l~~~l~~l~~~y~lG-vR~i~lt~n~~n~~~~~i~~mn~lGmi-iDl-----SH~s---~~t~~d~l~~s~~Pvi~SHs 78 (103)
+++.-++.|+.+++.| ||++|++-.......++++...+.|+. +++ +=.. +..+.+.+......|++--.
T Consensus 156 ~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~l~~~~~~~gi~v~a~sp 235 (346)
T 1lqa_A 156 SLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSC 235 (346)
T ss_dssp CHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCTHHHHHHHHHHHHCCEEEEECT
T ss_pred CHHHHHHHHHHHHHcCCeEEEEecCCCHHHHHHHHHHHHHcCCCCceEEeccCChhhchhHHHHHHHHHHcCCeEEEecc
Confidence 3444577899999999 999999743222223555555554531 322 2111 35677777777888877655
Q ss_pred Cccc
Q psy11267 79 SAFA 82 (103)
Q Consensus 79 ~~ra 82 (103)
-+.+
T Consensus 236 L~~G 239 (346)
T 1lqa_A 236 LGFG 239 (346)
T ss_dssp TGGG
T ss_pred hhhh
Confidence 5554
No 220
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A
Probab=23.64 E-value=82 Score=23.43 Aligned_cols=15 Identities=33% Similarity=0.485 Sum_probs=7.5
Q ss_pred HHHHHHHhcCCeeec
Q psy11267 40 LVVRECNRLGMLIDL 54 (103)
Q Consensus 40 ~~i~~mn~lGmiiDl 54 (103)
++|+.+.+.|+.||.
T Consensus 187 ~~v~~l~~~G~~iDg 201 (313)
T 1v0l_A 187 NMVRDFKQRGVPIDC 201 (313)
T ss_dssp HHHHHHHHHTCCCCE
T ss_pred HHHHHHHHCCCCcce
Confidence 444555555554444
No 221
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto reductase family 7, SSA reductase, barrel; HET: FLC NDP; 2.4A {Homo sapiens}
Probab=23.64 E-value=66 Score=24.15 Aligned_cols=74 Identities=12% Similarity=0.040 Sum_probs=45.6
Q ss_pred cCCcHHHHHHHHHcC-ccEEeeccCCCCchHHHHHHHHhcCC-eeecc----CC----CHHHHHHHHHhcCCCEEEecCC
Q psy11267 10 LGNSMAVLRMFYKLG-VRYLTLTHACPTPWYLVVRECNRLGM-LIDLS----HT----SVQTMRHVLNISSAPVIFSHSS 79 (103)
Q Consensus 10 l~~~l~~l~~~y~lG-vR~i~lt~n~~n~~~~~i~~mn~lGm-iiDlS----H~----s~~t~~d~l~~s~~Pvi~SHs~ 79 (103)
++.-++.|+.+++.| ||++|++-.....+.++++...+.|. -+++- |. .+..+.+.+...+..|++--.-
T Consensus 150 ~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~g~~~~~~~Q~~yn~~~~~~e~~l~~~~~~~gi~v~a~spL 229 (360)
T 2bp1_A 150 VEETLHACQRLHQEGKFVELGLSNYASWEVAEICTLCKSNGWILPTVYQGMYNATTRQVETELFPCLRHFGLRFYAYNPL 229 (360)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTT
T ss_pred HHHHHHHHHHHHHCCCccEEEEeCCCHHHHHHHHHHHHHcCCCCceEEeeccchhhccchhhHHHHHHHcCCeEEEeccc
Confidence 444577899999999 99999986543333466666666663 23321 11 1234666677777887765555
Q ss_pred cccc
Q psy11267 80 AFAL 83 (103)
Q Consensus 80 ~ral 83 (103)
+.++
T Consensus 230 ~~G~ 233 (360)
T 2bp1_A 230 AGGL 233 (360)
T ss_dssp GGGG
T ss_pred ccCc
Confidence 5543
No 222
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=23.63 E-value=66 Score=25.85 Aligned_cols=48 Identities=23% Similarity=0.241 Sum_probs=34.2
Q ss_pred HHHHHHHHHcCccEEeec--cCC------------------CCchH------HHHHHHHhcCC--eeec--cCCCHHH
Q psy11267 14 MAVLRMFYKLGVRYLTLT--HAC------------------PTPWY------LVVRECNRLGM--LIDL--SHTSVQT 61 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt--~n~------------------~n~~~------~~i~~mn~lGm--iiDl--SH~s~~t 61 (103)
.+.|+.+.++||-.|.|+ +.. +..|| ++|+++.++|| ++|+ .|+|...
T Consensus 151 ~~~Ldyl~~LGv~aI~l~Pi~~~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~~~~~ 228 (601)
T 3edf_A 151 IDHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVVLSHIGKHH 228 (601)
T ss_dssp HHTHHHHHHTTCCEEEESCCEECCCSSSGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTS
T ss_pred HHHHHHHHHcCCCEEEECccccCCCCCCCCCCcCccccccccccCCCHHHHHHHHHHHHHcCCEEEEEECCcccCCcc
Confidence 468999999999988865 211 11233 99999999887 5565 4888754
No 223
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=23.63 E-value=75 Score=23.93 Aligned_cols=57 Identities=14% Similarity=0.147 Sum_probs=36.5
Q ss_pred HHHHHHHhcC--CeeeccCCCHHHHHHHHHhcCCCEEEecCCccccCCCCCCCCHHHHHHhhhh
Q psy11267 40 LVVRECNRLG--MLIDLSHTSVQTMRHVLNISSAPVIFSHSSAFALCPSPRNVPDPVLKLVFPY 101 (103)
Q Consensus 40 ~~i~~mn~lG--miiDlSH~s~~t~~d~l~~s~~Pvi~SHs~~ral~~~~RNl~De~i~~ia~~ 101 (103)
++++.+.+.| +++=+.|.+.++.. ...|+-.|--....-...||.+|.|+|+.+.+.
T Consensus 87 ~~~~~vh~~G~~i~~QL~H~Gr~~~~-----~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~ 145 (340)
T 3gr7_A 87 ELVGLVKEHGAAIGIQLAHAGRKSQV-----PGEIIAPSAVPFDDSSPTPKEMTKADIEETVQA 145 (340)
T ss_dssp HHHHHHHHTTCEEEEEEECCGGGCCS-----SSCCEESSSCCSSTTSCCCEECCHHHHHHHHHH
T ss_pred HHHHHHHhCCCeEEEEeccCCCccCC-----CCCccCCCCccccCCCCCCccCCHHHHHHHHHH
Confidence 7888888877 67888999865432 123332221111222457899999999998764
No 224
>1u0k_A Gene product PA4716; sctructural genomics, MCSG, protein initiative, structural genomics, PSI, midwest center for ST genomics; 1.50A {Pseudomonas aeruginosa} SCOP: d.21.1.2 d.21.1.2
Probab=23.59 E-value=30 Score=25.14 Aligned_cols=25 Identities=12% Similarity=0.158 Sum_probs=19.8
Q ss_pred CCccccCCCCCCCCHHHHHHhhhhc
Q psy11267 78 SSAFALCPSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 78 s~~ral~~~~RNl~De~i~~ia~~~ 102 (103)
.|..+++...+.++++++++||+++
T Consensus 20 GNp~~Vv~~~~~l~~~~mq~ia~~~ 44 (288)
T 1u0k_A 20 GNGLAVFDDASALDDAAMQAWTREL 44 (288)
T ss_dssp SEEEEEESCCTTCCHHHHHHHHHHH
T ss_pred CCceEEEeCCCCCCHHHHHHHHHHh
Confidence 4566677667789999999999864
No 225
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A*
Probab=23.53 E-value=45 Score=24.59 Aligned_cols=23 Identities=13% Similarity=0.466 Sum_probs=18.1
Q ss_pred cCCcHHHHHHHHHcC-ccEEeecc
Q psy11267 10 LGNSMAVLRMFYKLG-VRYLTLTH 32 (103)
Q Consensus 10 l~~~l~~l~~~y~lG-vR~i~lt~ 32 (103)
++..+..|+.+++.| +|++|++-
T Consensus 147 ~~e~~~al~~l~~~Gkir~iGvSn 170 (317)
T 1ynp_A 147 IDETIEAFEELKQEGVIRYYGISS 170 (317)
T ss_dssp HHHHHHHHHHHHHHTSEEEEEEEC
T ss_pred hHHHHHHHHHHHhCCceEEEEecC
Confidence 344567888999999 89999984
No 226
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=23.47 E-value=66 Score=24.50 Aligned_cols=49 Identities=27% Similarity=0.405 Sum_probs=34.1
Q ss_pred HHHHHHHHHcCccEEeec--cC-------------C--------CCchH------HHHHHHHhcCC--eeec--cCCCHH
Q psy11267 14 MAVLRMFYKLGVRYLTLT--HA-------------C--------PTPWY------LVVRECNRLGM--LIDL--SHTSVQ 60 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt--~n-------------~--------~n~~~------~~i~~mn~lGm--iiDl--SH~s~~ 60 (103)
.+.|+.+.++|+-.|.|+ +. . +..|| ++|+++.+.|| ++|+ .|++..
T Consensus 33 ~~~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~gY~~~dy~~i~~~~Gt~~~~~~lv~~~h~~Gi~vi~D~V~NH~~~~ 112 (449)
T 3dhu_A 33 TADLQRIKDLGTDILWLLPINPIGEVNRKGTLGSPYAIKDYRGINPEYGTLADFKALTDRAHELGMKVMLDIVYNHTSPD 112 (449)
T ss_dssp HTTHHHHHHHTCSEEEECCCSCBCSTTCCTTTCCTTSBSCTTSCCGGGCCHHHHHHHHHHHHHTTCEEEEEECCSEECTT
T ss_pred HHhHHHHHHcCCCEEEECCcccccccCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEccCcCcCc
Confidence 347889999999988875 20 0 12233 99999999887 5675 588864
Q ss_pred HH
Q psy11267 61 TM 62 (103)
Q Consensus 61 t~ 62 (103)
..
T Consensus 113 ~~ 114 (449)
T 3dhu_A 113 SV 114 (449)
T ss_dssp SH
T ss_pred cc
Confidence 43
No 227
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A
Probab=23.34 E-value=62 Score=23.84 Aligned_cols=41 Identities=20% Similarity=0.229 Sum_probs=21.4
Q ss_pred HHHHHHHhcCCeeec----cCCCH---HHHHHHH---HhcCC-CEEEecCCc
Q psy11267 40 LVVRECNRLGMLIDL----SHTSV---QTMRHVL---NISSA-PVIFSHSSA 80 (103)
Q Consensus 40 ~~i~~mn~lGmiiDl----SH~s~---~t~~d~l---~~s~~-Pvi~SHs~~ 80 (103)
++|+.+.+.|+-||. +|.+. ..+.+++ ..... ||.+|=-.+
T Consensus 189 ~~v~~l~~~G~~iDgiG~Q~H~~~~~~~~~~~~l~~~a~~G~~pi~iTEldi 240 (303)
T 1i1w_A 189 NRVKKWRAAGVPIDGIGSQTHLSAGQGASVLQALPLLASAGTPEVAITELDV 240 (303)
T ss_dssp HHHHHHHHTTCCCCEEEECCEECTTTHHHHHHHHHHHHTTCCSEEEEEEEEE
T ss_pred HHHHHHHHCCCcccEEEeccccCCCCHHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 666666667776665 56332 2233332 22355 666664443
No 228
>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A*
Probab=23.25 E-value=87 Score=24.84 Aligned_cols=42 Identities=14% Similarity=0.241 Sum_probs=31.1
Q ss_pred HHHHHHHcCccEEeeccCCCCchH----------------------HHHHHHHhcCCeeeccCC
Q psy11267 16 VLRMFYKLGVRYLTLTHACPTPWY----------------------LVVRECNRLGMLIDLSHT 57 (103)
Q Consensus 16 ~l~~~y~lGvR~i~lt~n~~n~~~----------------------~~i~~mn~lGmiiDlSH~ 57 (103)
.++.+.+.|++++.||=....-|+ ++++.+.+.||-+=+.+.
T Consensus 110 Wa~~~k~AGakyvvlTaKHHDGF~lwpSk~t~~ns~~~~pkrDlv~El~~A~rk~Glk~GlY~S 173 (455)
T 2zxd_A 110 WADLFKKAGAKYVIPTTKHHDGFCLWGTKYTDFNSVKRGPKRDLVGDLAKAVREAGLRFGVYYS 173 (455)
T ss_dssp HHHHHHHTTCSEEEEEEECTTCCBSSCCSSCSCBTTTSTTCSCHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHhCCCEEEEEeeccCCccccCCCCCCCcccccCCCCChHHHHHHHHHHcCCeEEEEec
Confidence 678899999999999965432222 777888888887776544
No 229
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=23.17 E-value=46 Score=19.26 Aligned_cols=21 Identities=24% Similarity=0.449 Sum_probs=18.2
Q ss_pred HHHHHHHcCccEEeeccCCCC
Q psy11267 16 VLRMFYKLGVRYLTLTHACPT 36 (103)
Q Consensus 16 ~l~~~y~lGvR~i~lt~n~~n 36 (103)
.+..|.++|.--+.+||.+++
T Consensus 23 likvfaelgyndinvtwdgdt 43 (62)
T 2gjh_A 23 LIKVFAELGYNDINVTWDGDT 43 (62)
T ss_dssp HHHHHHHTTCCSCEEEECSSC
T ss_pred HHHHHHHhCcccceeEEcCCE
Confidence 568899999999999998764
No 230
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=23.07 E-value=70 Score=22.68 Aligned_cols=44 Identities=11% Similarity=0.073 Sum_probs=31.2
Q ss_pred cHHHHHHHHHcCccEEeeccCCCCchH------HHHHHHHhcC----CeeeccCC
Q psy11267 13 SMAVLRMFYKLGVRYLTLTHACPTPWY------LVVRECNRLG----MLIDLSHT 57 (103)
Q Consensus 13 ~l~~l~~~y~lGvR~i~lt~n~~n~~~------~~i~~mn~lG----miiDlSH~ 57 (103)
|++.|+...+-..+.+-+++ .+|+-| ++.+-+.+.| +++|-+|.
T Consensus 128 d~~~l~~~i~~~~~~v~~~~-~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~ 181 (384)
T 1eg5_A 128 KLEELEKLVDEDTFLVSIMA-ANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQT 181 (384)
T ss_dssp CHHHHHHHCCTTEEEEEEES-BCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTT
T ss_pred CHHHHHHHhCCCCeEEEEEC-CCCCcccccCHHHHHHHHHhcCCceEEEEEhhhh
Confidence 57777766655778888874 446655 6777777777 67898886
No 231
>2d0w_A Cytochrome CL; electron transfer, electron transport; HET: HEM; 1.98A {Hyphomicrobium denitrificans}
Probab=23.04 E-value=44 Score=22.38 Aligned_cols=17 Identities=0% Similarity=0.098 Sum_probs=14.5
Q ss_pred CCCCCCHHHHHHhhhhc
Q psy11267 86 SPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 86 ~~RNl~De~i~~ia~~~ 102 (103)
....|||+++++|+++|
T Consensus 106 ~~~~Ls~~ei~~l~aYl 122 (170)
T 2d0w_A 106 HGQDLELDNMLKLIAWI 122 (170)
T ss_dssp CTTTSCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHH
Confidence 34579999999999987
No 232
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=22.99 E-value=1.2e+02 Score=21.51 Aligned_cols=34 Identities=12% Similarity=0.113 Sum_probs=25.5
Q ss_pred CcHHHHHHHHHcCccEEeeccCCCCchH-HHHHHHHh
Q psy11267 12 NSMAVLRMFYKLGVRYLTLTHACPTPWY-LVVRECNR 47 (103)
Q Consensus 12 ~~l~~l~~~y~lGvR~i~lt~n~~n~~~-~~i~~mn~ 47 (103)
+-++.++.+.+-|++.++++++. +.+ +.++++.+
T Consensus 39 ~~~~~~~al~~gGv~~iel~~k~--~~~~~~i~~l~~ 73 (225)
T 1mxs_A 39 DILPLADALAAGGIRTLEVTLRS--QHGLKAIQVLRE 73 (225)
T ss_dssp GHHHHHHHHHHTTCCEEEEESSS--THHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEecCC--ccHHHHHHHHHH
Confidence 34678999999999999999864 444 66776543
No 233
>1y1u_A Signal transducer and activator of transcription; STAT, DNA-binding, SH2 domain, transcription REGU signaling protein; 3.21A {Mus musculus}
Probab=22.95 E-value=37 Score=28.24 Aligned_cols=19 Identities=21% Similarity=0.202 Sum_probs=15.9
Q ss_pred CCCCCCCCHHHHHHhhhhc
Q psy11267 84 CPSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 84 ~~~~RNl~De~i~~ia~~~ 102 (103)
+...|.|++++++-+++++
T Consensus 392 v~t~R~Lt~~~L~~L~~Kl 410 (585)
T 1y1u_A 392 VQSNRGLTKENLVFLAQKL 410 (585)
T ss_dssp HTSSCCCCHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHh
Confidence 3478999999999998865
No 234
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=22.87 E-value=52 Score=24.39 Aligned_cols=92 Identities=16% Similarity=0.218 Sum_probs=45.2
Q ss_pred cCCcHHHHHHHHHcCccEEeeccC-----CCC---ch-H-HHHHHHH-hcCCeeeccCC------------CHH-----H
Q psy11267 10 LGNSMAVLRMFYKLGVRYLTLTHA-----CPT---PW-Y-LVVRECN-RLGMLIDLSHT------------SVQ-----T 61 (103)
Q Consensus 10 l~~~l~~l~~~y~lGvR~i~lt~n-----~~n---~~-~-~~i~~mn-~lGmiiDlSH~------------s~~-----t 61 (103)
++.=...++.+...|-..+.|.+- .++ .+ + ..+++.- .+-+++|.||. +.+ .
T Consensus 142 ~~e~~~A~~~i~~~Gn~~i~L~~rg~~~~~~~~~~dl~~i~~lk~~~~~~pV~~D~sH~~q~~~~~~~~s~g~~~~~~~~ 221 (280)
T 2qkf_A 142 PSQMKNIVEKFHEAGNGKLILCERGSSFGYDNLVVDMLGFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQALDL 221 (280)
T ss_dssp GGGHHHHHHHHHHTTCCCEEEEECCEECSTTCEECCTTHHHHHHHHTTTCCEEEEHHHHCC----------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCeEEEEECCCCCCCCccccCHHHHHHHHHhCCCCCEEEECCCCccccCccccccCCchhhHHHH
Confidence 343344677778888777776662 221 11 1 4455554 57899999999 432 2
Q ss_pred HHHHHHhcCC--CEEEecCC-ccccCCCCCCCCHHHHHHhhhhc
Q psy11267 62 MRHVLNISSA--PVIFSHSS-AFALCPSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 62 ~~d~l~~s~~--Pvi~SHs~-~ral~~~~RNl~De~i~~ia~~~ 102 (103)
...++ ...+ -+|=+|-. -+++++++=.++-++++.+.+.+
T Consensus 222 a~aav-a~Ga~G~~IE~H~~~d~al~D~~~sl~p~~l~~lv~~i 264 (280)
T 2qkf_A 222 ALAGM-ATRLAGLFLESHPDPKLAKCDGPSALPLHLLEDFLIRI 264 (280)
T ss_dssp HHHHH-TTCCSEEEEEC----------------CCHHHHHHHHH
T ss_pred HHHHH-HcCCCEEEEeecCCcccCCCccccCCCHHHHHHHHHHH
Confidence 22222 2233 47778854 56678999999988888876643
No 235
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=22.84 E-value=67 Score=26.25 Aligned_cols=45 Identities=18% Similarity=0.317 Sum_probs=30.7
Q ss_pred HHHHHHHHcCccEEeec----cCCCC--------------chH------HHHHHHHhcCCe--eec--cCCCH
Q psy11267 15 AVLRMFYKLGVRYLTLT----HACPT--------------PWY------LVVRECNRLGML--IDL--SHTSV 59 (103)
Q Consensus 15 ~~l~~~y~lGvR~i~lt----~n~~n--------------~~~------~~i~~mn~lGmi--iDl--SH~s~ 59 (103)
+.|+.+.++|+-.|.|. +.... .+| ++|+++.+.||- +|+ .|++.
T Consensus 158 ~~L~yl~~lGv~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~~~G~~~~~~~lv~~~H~~Gi~VilD~V~NH~~~ 230 (618)
T 3m07_A 158 AKLPYLAELGVTVIEVMPVAQFGGERGWGYDGVLLYAPHSAYGTPDDFKAFIDAAHGYGLSVVLDIVLNHFGP 230 (618)
T ss_dssp TTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSCCCS
T ss_pred HHHHHHHHcCCCEEEeCChhccCCCCCCCcCcccccccCcCcCCHHHHHHHHHHHHHCCCEEEEeecCccCCC
Confidence 47889999999988764 21112 222 999999998864 564 57763
No 236
>2c8s_A Cytochrome C-L; HAEM, heme, electron transport, metal-binding; HET: HEM; 1.6A {Methylobacterium extorquens} SCOP: a.3.1.1
Probab=22.74 E-value=36 Score=23.01 Aligned_cols=17 Identities=6% Similarity=0.178 Sum_probs=14.4
Q ss_pred CCCCCCHHHHHHhhhhc
Q psy11267 86 SPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 86 ~~RNl~De~i~~ia~~~ 102 (103)
....|||+++++|+++|
T Consensus 112 ~~~~Lsd~ei~~laaYl 128 (172)
T 2c8s_A 112 HNENLTPDEMLQTIAWI 128 (172)
T ss_dssp CCCCSCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHH
Confidence 34479999999999987
No 237
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=22.72 E-value=75 Score=20.82 Aligned_cols=26 Identities=27% Similarity=0.224 Sum_probs=20.5
Q ss_pred HHHHHHHHHcCccEEeeccCCCCchH
Q psy11267 14 MAVLRMFYKLGVRYLTLTHACPTPWY 39 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n~~n~~~ 39 (103)
++.++...+.|++.+.+|-+.+++++
T Consensus 104 ~~~~~~ak~~g~~vi~IT~~~~s~l~ 129 (187)
T 3sho_A 104 VAALAGAAERGVPTMALTDSSVSPPA 129 (187)
T ss_dssp HHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred HHHHHHHHHCCCCEEEEeCCCCCcch
Confidence 45677788889999999988777665
No 238
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A
Probab=22.69 E-value=68 Score=24.27 Aligned_cols=44 Identities=16% Similarity=0.173 Sum_probs=32.1
Q ss_pred HHHHHHHhcCCeeec----cCC-----CHHHHHHHHH-----hcCCCEEEecCCcccc
Q psy11267 40 LVVRECNRLGMLIDL----SHT-----SVQTMRHVLN-----ISSAPVIFSHSSAFAL 83 (103)
Q Consensus 40 ~~i~~mn~lGmiiDl----SH~-----s~~t~~d~l~-----~s~~Pvi~SHs~~ral 83 (103)
++|+.|.+.|+.||. +|. +...+.++++ ....||.+|=-.++..
T Consensus 196 ~~v~~l~~~G~~iDgiG~Q~H~~~~~p~~~~~~~~l~~~a~~~~Gl~i~ITElDv~~~ 253 (348)
T 1w32_A 196 NLVQRLLNNGVPIDGVGFQMHVMNDYPSIANIRQAMQKIVALSPTLKIKITELDVRLN 253 (348)
T ss_dssp HHHHHHHHTTCCCCEEEECCEEESSSSCHHHHHHHHHHHHTTCSSCEEEEEEEEEESC
T ss_pred HHHHHHHHCCCcccEEEeccccCCCCCCHHHHHHHHHHHhcccCCCeEEEEeCcccCC
Confidence 889999999999997 784 4566666655 4468998886555443
No 239
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3
Probab=22.68 E-value=75 Score=23.50 Aligned_cols=11 Identities=9% Similarity=0.090 Sum_probs=5.6
Q ss_pred HHHHHHHhcCC
Q psy11267 40 LVVRECNRLGM 50 (103)
Q Consensus 40 ~~i~~mn~lGm 50 (103)
+.++++.++|.
T Consensus 221 ~~l~~~a~~G~ 231 (303)
T 1ta3_B 221 GALSSLANTGV 231 (303)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHHCCC
Confidence 44555555554
No 240
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=22.22 E-value=44 Score=25.43 Aligned_cols=58 Identities=22% Similarity=0.133 Sum_probs=36.5
Q ss_pred HHHHHHHhcC--CeeeccCCCHHHHHHHHHhcCCCEEEecCCccccCCCCCCCCHHHHHHhhhh
Q psy11267 40 LVVRECNRLG--MLIDLSHTSVQTMRHVLNISSAPVIFSHSSAFALCPSPRNVPDPVLKLVFPY 101 (103)
Q Consensus 40 ~~i~~mn~lG--miiDlSH~s~~t~~d~l~~s~~Pvi~SHs~~ral~~~~RNl~De~i~~ia~~ 101 (103)
++++.+.+.| +++=+.|++.++.. ....|+-.|--.+..-...||.+|.|+|+.+.+.
T Consensus 85 ~~~~~vh~~G~~i~~QL~H~Gr~~~~----~g~~~~apS~i~~~~~~~~p~~mt~~eI~~ii~~ 144 (343)
T 3kru_A 85 KIVDICKANGAVMGIQLAHAGRKCNI----SYEDVVGPSPIKAGDRYKLPRELSVEEIKSIVKA 144 (343)
T ss_dssp HHHHHHHHTTCEEEEEEECCGGGCCC----TTSCCEESSSCCSSTTSCCCEECCHHHHHHHHHH
T ss_pred HHHHHHhcCCceEeeehhhccCccCc----chhhccCCCcCCCCccccCchhcCHHHHHHHHHH
Confidence 7778887777 67888998865432 1123332222112222457899999999998764
No 241
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=22.09 E-value=77 Score=20.77 Aligned_cols=26 Identities=12% Similarity=-0.178 Sum_probs=21.7
Q ss_pred HHHHHHHHHcCccEEeeccCCCCchH
Q psy11267 14 MAVLRMFYKLGVRYLTLTHACPTPWY 39 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n~~n~~~ 39 (103)
++.++...+.|++.+.+|-+.+++++
T Consensus 96 ~~~~~~ak~~g~~vi~IT~~~~s~l~ 121 (186)
T 1m3s_A 96 IHTAAKAKSLHGIVAALTINPESSIG 121 (186)
T ss_dssp HHHHHHHHHTTCEEEEEESCTTSHHH
T ss_pred HHHHHHHHHCCCEEEEEECCCCCchH
Confidence 56788889999999999998777765
No 242
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=21.94 E-value=1.9e+02 Score=19.45 Aligned_cols=84 Identities=15% Similarity=0.196 Sum_probs=49.0
Q ss_pred HHHHHHHHHcCccEEeeccCCCCchHHHHHHHHhcC------CeeeccCCCHHHHHHHHHhc----CCC-EEEecCCccc
Q psy11267 14 MAVLRMFYKLGVRYLTLTHACPTPWYLVVRECNRLG------MLIDLSHTSVQTMRHVLNIS----SAP-VIFSHSSAFA 82 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n~~n~~~~~i~~mn~lG------miiDlSH~s~~t~~d~l~~s----~~P-vi~SHs~~ra 82 (103)
....+.|.+.|.+.+.+.-+ .....++.+++.+.| +.+|+.-.++..+.++++.. ..+ +++.-++...
T Consensus 28 ~~ia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~ 106 (247)
T 3i1j_A 28 AAAARAYAAHGASVVLLGRT-EASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIG 106 (247)
T ss_dssp HHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHSCCSEEEECCCCCC
T ss_pred HHHHHHHHHCCCEEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhCCCCCEEEECCccCC
Confidence 45688899999987665432 223337777777665 45677767777777666653 344 4443333322
Q ss_pred cCCCCCCCCHHHHHHh
Q psy11267 83 LCPSPRNVPDPVLKLV 98 (103)
Q Consensus 83 l~~~~RNl~De~i~~i 98 (103)
....-..++.+.++..
T Consensus 107 ~~~~~~~~~~~~~~~~ 122 (247)
T 3i1j_A 107 PRTPLEQLPDEDFMQV 122 (247)
T ss_dssp CCSCGGGSCHHHHHHH
T ss_pred CCCCcccCCHHHHHHH
Confidence 2222335666666543
No 243
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A
Probab=21.86 E-value=81 Score=23.51 Aligned_cols=44 Identities=14% Similarity=0.172 Sum_probs=33.0
Q ss_pred HHHHHHHhcCCeeec----cCC-----CHHHHHHHHHh---cCCCEEEecCCcccc
Q psy11267 40 LVVRECNRLGMLIDL----SHT-----SVQTMRHVLNI---SSAPVIFSHSSAFAL 83 (103)
Q Consensus 40 ~~i~~mn~lGmiiDl----SH~-----s~~t~~d~l~~---s~~Pvi~SHs~~ral 83 (103)
++|+.+.+.|+.||. +|. +...+.++++. ...||.+|=-.++..
T Consensus 192 ~~v~~l~~~g~~idgiG~Q~H~~~~~~~~~~~~~~l~~~a~~G~pi~iTEldi~~~ 247 (331)
T 1n82_A 192 ALVKSLRDKGIPIHGIGMQAHWSLTRPSLDEIRAAIERYASLGVVLHITELDVSMF 247 (331)
T ss_dssp HHHHHHHHTTCCCCEEEECCEEESSSSCHHHHHHHHHHHHTTTCEEEEEEEEEESS
T ss_pred HHHHHHHHCCCccceEEeceecCCCCCCHHHHHHHHHHHHhcCCeEEEEeceecCC
Confidence 889999999999997 785 45666666554 478999887666554
No 244
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=21.84 E-value=2.7e+02 Score=21.31 Aligned_cols=53 Identities=21% Similarity=0.065 Sum_probs=35.8
Q ss_pred HHHHcCccEEeeccCCCCchH---------HHHHHHHhcCCeeeccCCCHHHHHHHHHhcCCCEEE
Q psy11267 19 MFYKLGVRYLTLTHACPTPWY---------LVVRECNRLGMLIDLSHTSVQTMRHVLNISSAPVIF 75 (103)
Q Consensus 19 ~~y~lGvR~i~lt~n~~n~~~---------~~i~~mn~lGmiiDlSH~s~~t~~d~l~~s~~Pvi~ 75 (103)
..++||-..+.+.-.. ...+ .++..|-+ +|=+=|.+..+..+..+.++.|||=
T Consensus 91 A~~~LGg~vi~l~~~~-ss~~kgEsl~DTarvLs~y~D---~IviR~~~~~~~~~lA~~~~vPVIN 152 (340)
T 4ep1_A 91 GMVQLGGHGMFLNGKE-MQMGRGETVSDTAKVLSHYID---GIMIRTFSHADVEELAKESSIPVIN 152 (340)
T ss_dssp HHHHTTCEEEEEESCC-------CCTTHHHHHHHHHCS---EEEEECSCHHHHHHHHHHCSSCEEE
T ss_pred HHHHcCCeEEEcCccc-ccCCCCCCHHHHHHHHHHhCC---EEEEecCChhHHHHHHHhCCCCEEe
Confidence 4577888888776542 2333 56666632 3336689999999999999999983
No 245
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A*
Probab=21.73 E-value=2.4e+02 Score=20.55 Aligned_cols=89 Identities=10% Similarity=0.030 Sum_probs=52.2
Q ss_pred cCCcHHHHHHHHHcC-ccEEeeccCCCCchHHHHHHHHhc-CC--eee-----ccC-CCHHHHHHHHHhcCCCEEEecCC
Q psy11267 10 LGNSMAVLRMFYKLG-VRYLTLTHACPTPWYLVVRECNRL-GM--LID-----LSH-TSVQTMRHVLNISSAPVIFSHSS 79 (103)
Q Consensus 10 l~~~l~~l~~~y~lG-vR~i~lt~n~~n~~~~~i~~mn~l-Gm--iiD-----lSH-~s~~t~~d~l~~s~~Pvi~SHs~ 79 (103)
+..-++.|+.+++.| +|++|++-.. .+.++++.+. ++ ..+ .+= .-...+.+.+...+..|++--.-
T Consensus 144 ~~e~~~ale~l~~~Gkir~iGvSn~~----~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL 219 (323)
T 1afs_A 144 ICDTWEAMEKCKDAGLAKSIGVSNFN----CRQLERILNKPGLKYKPVCNQVECHLYLNQSKMLDYCKSKDIILVSYCTL 219 (323)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCC----HHHHHHHHTCTTCCSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTT
T ss_pred HHHHHHHHHHHHHcCCcCEEEeeCCC----HHHHHHHHHhcCcCCCCEEEeeccccccchHHHHHHHHHcCCEEEEecCc
Confidence 344567899999999 9999998542 1234444432 33 112 111 11345666666677887765554
Q ss_pred ccccC------CCCCCCCHHHHHHhhhhc
Q psy11267 80 AFALC------PSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 80 ~ral~------~~~RNl~De~i~~ia~~~ 102 (103)
+.++. +.|.-+.++.+++||++.
T Consensus 220 ~~G~l~~~~~~~~~~~~~~~~l~~ia~~~ 248 (323)
T 1afs_A 220 GSSRDKTWVDQKSPVLLDDPVLCAIAKKY 248 (323)
T ss_dssp SCCCCTTTSCTTSCCGGGCHHHHHHHHHT
T ss_pred cCCccccccccCCcchhcCHHHHHHHHHh
Confidence 44432 123345678899988763
No 246
>3kip_A 3-dehydroquinase, type II; lyase; 2.95A {Candida albicans}
Probab=21.64 E-value=1.2e+02 Score=21.26 Aligned_cols=49 Identities=20% Similarity=0.181 Sum_probs=36.4
Q ss_pred EeeccCCCCchHHHHHHHHh------cCCeee---ccCCCHHHHHHHHHhcCCCEEEec
Q psy11267 28 LTLTHACPTPWYLVVRECNR------LGMLID---LSHTSVQTMRHVLNISSAPVIFSH 77 (103)
Q Consensus 28 i~lt~n~~n~~~~~i~~mn~------lGmiiD---lSH~s~~t~~d~l~~s~~Pvi~SH 77 (103)
+.+.+...|.=|++|..+.+ -|++|+ .+|.|. +.+||+...+.|+|=-|
T Consensus 59 ~~v~~~QSN~EGeLId~Ih~A~~~~~dgIIINpgAyTHtSv-AlrDAL~~v~~P~VEVH 116 (167)
T 3kip_A 59 SEVLVFQSNTEGFIIDRIHEAKRQGVGFVVINAGAYTHTSV-GIRDALLGTAIPFIEVH 116 (167)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHHTTCCEEEEECGGGGGTCH-HHHHHHHHTTCCEEEEE
T ss_pred cEEEEEecCCHHHHHHHHHHhhhcCccEEEEccccceeccH-HHHHHHHhcCCCEEEEE
Confidence 45566666777777776644 356776 579998 78999999999999666
No 247
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=21.56 E-value=99 Score=20.33 Aligned_cols=26 Identities=15% Similarity=0.078 Sum_probs=19.5
Q ss_pred HHHHHHHHHcCccEEeeccCCCCchH
Q psy11267 14 MAVLRMFYKLGVRYLTLTHACPTPWY 39 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n~~n~~~ 39 (103)
++.++...+.|++.+++|-+.+++++
T Consensus 133 ~~~~~~ak~~g~~vI~IT~~~~s~L~ 158 (198)
T 2xbl_A 133 LAAFREAKAKGMTCVGFTGNRGGEMR 158 (198)
T ss_dssp HHHHHHHHHTTCEEEEEECSCCCTHH
T ss_pred HHHHHHHHHCCCeEEEEECCCCCcHH
Confidence 45667777888888888887777765
No 248
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=21.55 E-value=1.3e+02 Score=21.36 Aligned_cols=36 Identities=11% Similarity=0.071 Sum_probs=25.8
Q ss_pred CCcHHHHHHHHHcCccEEeeccCCCCchHHHHHHHHh
Q psy11267 11 GNSMAVLRMFYKLGVRYLTLTHACPTPWYLVVRECNR 47 (103)
Q Consensus 11 ~~~l~~l~~~y~lGvR~i~lt~n~~n~~~~~i~~mn~ 47 (103)
++-++.++.+.+-|++.++++++..+ ..+.|+++.+
T Consensus 29 ~~~~~~~~al~~gGv~~iel~~k~~~-~~~~i~~l~~ 64 (224)
T 1vhc_A 29 DDILPLADTLAKNGLSVAEITFRSEA-AADAIRLLRA 64 (224)
T ss_dssp GGHHHHHHHHHHTTCCEEEEETTSTT-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeccCch-HHHHHHHHHH
Confidence 33467899999999999999986432 2266665544
No 249
>2guk_A Hypothetical protein PG1857; alpha-beta, alpha-helical bundle, structural genomics, PSI, structure initiative; 1.91A {Porphyromonas gingivalis} SCOP: d.360.1.1
Probab=21.45 E-value=43 Score=22.41 Aligned_cols=37 Identities=14% Similarity=0.063 Sum_probs=25.9
Q ss_pred HHcCccEEeeccCCCCchHHHHHHHHhcCCeeeccCC
Q psy11267 21 YKLGVRYLTLTHACPTPWYLVVRECNRLGMLIDLSHT 57 (103)
Q Consensus 21 y~lGvR~i~lt~n~~n~~~~~i~~mn~lGmiiDlSH~ 57 (103)
|+.|||.+-|-=-.......+++++.+.||--=+--+
T Consensus 23 y~KGvR~LvL~T~~~~~~~~~~~rL~~~~I~Y~iq~v 59 (120)
T 2guk_A 23 FEKGVRSMVLATLANDDIPYAEERLRSRQIPYFAQPT 59 (120)
T ss_dssp HHHTSCSEEEEEEEGGGHHHHHHHHHHTTCCEEEECC
T ss_pred HhhhhHHHHHHhcCHhhHHHHHHHHHhCCCCEEEEEc
Confidence 6679998877543333444899999999986555444
No 250
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=21.43 E-value=1.9e+02 Score=19.57 Aligned_cols=41 Identities=17% Similarity=0.181 Sum_probs=31.9
Q ss_pred cHHHHHHHHHcCccEEeeccCCCCchHHHHHHHHhcCCeee
Q psy11267 13 SMAVLRMFYKLGVRYLTLTHACPTPWYLVVRECNRLGMLID 53 (103)
Q Consensus 13 ~l~~l~~~y~lGvR~i~lt~n~~n~~~~~i~~mn~lGmiiD 53 (103)
..+.|+.+.+.|++.+-.|-+..-+...+.+.+.++|+-++
T Consensus 27 ~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~ 67 (266)
T 3pdw_A 27 ACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPAT 67 (266)
T ss_dssp HHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 45688999999999998887665566677788888887543
No 251
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=21.42 E-value=1.1e+02 Score=22.03 Aligned_cols=41 Identities=10% Similarity=0.191 Sum_probs=31.5
Q ss_pred HHHHHHHHcCccEEeeccCCCCchH-HHHHHHHhcCCeeeccCC
Q psy11267 15 AVLRMFYKLGVRYLTLTHACPTPWY-LVVRECNRLGMLIDLSHT 57 (103)
Q Consensus 15 ~~l~~~y~lGvR~i~lt~n~~n~~~-~~i~~mn~lGmiiDlSH~ 57 (103)
.....+.++|.+..-++.-++..+| .+.++|.+.|+ |++++
T Consensus 47 NvA~~la~LG~~v~~i~~vG~D~~g~~i~~~L~~~gv--~~~~v 88 (328)
T 3kzh_A 47 NIAENMARVGVNTNFMSILGNDEHGKSIVEHSKKIGY--HMDDS 88 (328)
T ss_dssp HHHHHHHHTTCCEEEECEECSSHHHHHHHHHHHHHTE--ECTTC
T ss_pred HHHHHHHHcCCCcEEEEEecCcHHHHHHHHHHHHcCC--Cccce
Confidence 5667788999988888877777899 77788899985 54443
No 252
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=21.22 E-value=2.7e+02 Score=20.92 Aligned_cols=52 Identities=21% Similarity=0.204 Sum_probs=36.9
Q ss_pred HHHHcCccEEeeccCCCCchH---------HHHHHHHhcCCeeeccCCCHHHHHHHHHhcCCCEE
Q psy11267 19 MFYKLGVRYLTLTHACPTPWY---------LVVRECNRLGMLIDLSHTSVQTMRHVLNISSAPVI 74 (103)
Q Consensus 19 ~~y~lGvR~i~lt~n~~n~~~---------~~i~~mn~lGmiiDlSH~s~~t~~d~l~~s~~Pvi 74 (103)
..++||-..+.+.-+. ...+ .++..|-+ +|=+=|-...+..+..+.++.|||
T Consensus 57 A~~~LGg~~i~l~~~~-ss~~kgEsl~DTarvls~~~D---~iviR~~~~~~~~~lA~~~~vPVI 117 (307)
T 3tpf_A 57 AITELGGKALFLSSND-LQLSRGEPVKDTARVIGAMVD---FVMMRVNKHETLLEFARYSKAPVI 117 (307)
T ss_dssp HHHHTTCEEEEECTTT-CCTTTSSCHHHHHHHHHHHSS---EEEEECSCHHHHHHHHHHCSSCEE
T ss_pred HHHHcCCeEEEcCccc-ccCCCCCCHHHHHHHHHHhCC---EEEEecCChHHHHHHHHhCCCCEE
Confidence 4578888888886542 2233 55555533 344568889999999999999998
No 253
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=21.04 E-value=1.8e+02 Score=22.02 Aligned_cols=56 Identities=16% Similarity=0.117 Sum_probs=35.4
Q ss_pred HHHHHcCccEEe--eccCCCCchH------HHHHHHHhcCCeeeccCCCHHHHHHHHHhcCCCEEE
Q psy11267 18 RMFYKLGVRYLT--LTHACPTPWY------LVVRECNRLGMLIDLSHTSVQTMRHVLNISSAPVIF 75 (103)
Q Consensus 18 ~~~y~lGvR~i~--lt~n~~n~~~------~~i~~mn~lGmiiDlSH~s~~t~~d~l~~s~~Pvi~ 75 (103)
-..++||-..+. +.- +...+ +.++-+.+..=+|=+=|.+..+..+..+.++.|||=
T Consensus 64 ~A~~~LGg~~i~~~l~~--~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVIN 127 (328)
T 3grf_A 64 TAMTRLGGHAIYYELGA--NSNVGGKETVQDTAEVFSRMVDICTARLATKEMMREMAQHASVPCIN 127 (328)
T ss_dssp HHHHHHTCEEEEEEC------------CHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEEE
T ss_pred HHHHHCCCeEEccccCc--cccCCCCCCHHHHHHHHHhhCCEEEEecCChhHHHHHHHhCCCCEEe
Confidence 345788988888 654 33333 444444444334446688999999999999999883
No 254
>1gtz_A 3-dehydroquinate dehydratase; lyase, type II dehydroquinase, shikimate pathway, dodecameric quaternary structure; HET: DHK; 1.6A {Streptomyces coelicolor} SCOP: c.23.13.1 PDB: 2bt4_A* 1v1j_A* 2cjf_A* 1d0i_A 1gu0_A 1gu1_A*
Probab=20.99 E-value=90 Score=21.68 Aligned_cols=56 Identities=29% Similarity=0.283 Sum_probs=40.0
Q ss_pred HHcCccEEeeccCCCCchHHHHHHHHh-----cCCeee---ccCCCHHHHHHHHHhcC-CCEEEec-CCc
Q psy11267 21 YKLGVRYLTLTHACPTPWYLVVRECNR-----LGMLID---LSHTSVQTMRHVLNISS-APVIFSH-SSA 80 (103)
Q Consensus 21 y~lGvR~i~lt~n~~n~~~~~i~~mn~-----lGmiiD---lSH~s~~t~~d~l~~s~-~Pvi~SH-s~~ 80 (103)
-++|+ .+.+...|.=|++|..+.+ -|++|+ .+|.|. +..||+.... .|+|=-| ||+
T Consensus 45 ~~~g~---~v~~~QSN~EGeLId~Ih~a~~~~dgiIINpgA~THtSv-AlrDAl~~v~~~P~VEVHiSNi 110 (156)
T 1gtz_A 45 AAHGG---TVDFRQSNHEGELVDWIHEARLNHCGIVINPAAYSHTSV-AILDALNTCDGLPVVEVHISNI 110 (156)
T ss_dssp HTTTC---CEEEEECSCHHHHHHHHHHHHHHCSEEEEECTTHHHHCH-HHHHHHHTSTTCCEEEEESSCG
T ss_pred HHcCC---EEEEEeeCCHHHHHHHHHHhhhcCcEEEECchhhccccH-HHHHHHHhcCCCCEEEEEecCc
Confidence 44565 4556566777767766644 478888 468888 6889999999 9999666 444
No 255
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=20.97 E-value=77 Score=20.65 Aligned_cols=26 Identities=15% Similarity=0.200 Sum_probs=17.4
Q ss_pred HHHHHHHHHcCccEEeeccCCCCchH
Q psy11267 14 MAVLRMFYKLGVRYLTLTHACPTPWY 39 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n~~n~~~ 39 (103)
++.++...+.|++.+.+|-+.+++++
T Consensus 113 ~~~~~~ak~~g~~vi~IT~~~~s~la 138 (183)
T 2xhz_A 113 TALIPVLKRLHVPLICITGRPESSMA 138 (183)
T ss_dssp HHHHHHHHTTTCCEEEEESCTTSHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCChhH
Confidence 44566667777777777777666554
No 256
>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A*
Probab=20.90 E-value=87 Score=24.71 Aligned_cols=42 Identities=17% Similarity=0.310 Sum_probs=30.8
Q ss_pred HHHHHHHHcCccEEeeccCCCCchH----------------------HHHHHHHhcCCeeeccC
Q psy11267 15 AVLRMFYKLGVRYLTLTHACPTPWY----------------------LVVRECNRLGMLIDLSH 56 (103)
Q Consensus 15 ~~l~~~y~lGvR~i~lt~n~~n~~~----------------------~~i~~mn~lGmiiDlSH 56 (103)
+.++.+.+.|+|++-||=..+.-|+ ++++.+.+.||-+=+.+
T Consensus 82 ~Wa~~~k~AGakyvvlTaKHHDGF~lwpSk~t~~n~~~~~~krDlv~el~~A~rk~Glk~GlY~ 145 (450)
T 2wvv_A 82 KWAKMAKEMGTKYVKITTKHHEGFCLWPSKYTKYTVANTPYKRDILGELVKAYNDEGIDVHFYF 145 (450)
T ss_dssp HHHHHHHHHTCSEEEEEEECTTCCBSSCCTTCSCBGGGSTTCSCHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCcEEEEEEeecCCccccCCCCCCCccccCCCCCChHHHHHHHHHHcCCeEEEEe
Confidence 3678899999999999975432222 77788888888775443
No 257
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=20.78 E-value=48 Score=23.38 Aligned_cols=18 Identities=17% Similarity=0.054 Sum_probs=15.6
Q ss_pred CCCCCCCHHHHHHhhhhc
Q psy11267 85 PSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 85 ~~~RNl~De~i~~ia~~~ 102 (103)
++||+++.+++++|++.+
T Consensus 33 ~SpR~V~~~~a~~i~~~~ 50 (205)
T 1nsj_A 33 KSKRYISPEDARRISVEL 50 (205)
T ss_dssp TCTTBCCHHHHHHHHHHS
T ss_pred CCCCcCCHHHHHHHHHhC
Confidence 789999999999997654
No 258
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=20.72 E-value=1.2e+02 Score=24.60 Aligned_cols=44 Identities=18% Similarity=0.320 Sum_probs=30.4
Q ss_pred HHH-HHHHHcCccEEeec--cCC--CCchH--------------------HHHHHHHhcCC--eeec--cCCC
Q psy11267 15 AVL-RMFYKLGVRYLTLT--HAC--PTPWY--------------------LVVRECNRLGM--LIDL--SHTS 58 (103)
Q Consensus 15 ~~l-~~~y~lGvR~i~lt--~n~--~n~~~--------------------~~i~~mn~lGm--iiDl--SH~s 58 (103)
+.| +.+.++||-.|.|. +.. .+.|| ++|+++.+.|| ++|+ .|++
T Consensus 159 ~~ll~yl~~lGv~~i~l~Pi~~~~~~~~~GY~~~~y~~~~~~~Gt~~~~~~lv~~~H~~Gi~VilD~V~NH~~ 231 (617)
T 1m7x_A 159 DQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFP 231 (617)
T ss_dssp HHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECGGGSCHHHHHHHHHHHHHTTCEEEEEECTTSCC
T ss_pred HHHHHHHHHcCCCEEEecccccCCCCCCCCcccccCCccCccCCCHHHHHHHHHHHHHCCCEEEEEEecCccc
Confidence 454 89999999999875 211 11223 99999999887 5664 6874
No 259
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A*
Probab=20.70 E-value=50 Score=27.38 Aligned_cols=54 Identities=26% Similarity=0.424 Sum_probs=36.9
Q ss_pred HHHHHHHHHcCccEEeec--cCC--------------CCchH------HHHHHHHhcCC--eeec--cCCCHHH--HHHH
Q psy11267 14 MAVLRMFYKLGVRYLTLT--HAC--------------PTPWY------LVVRECNRLGM--LIDL--SHTSVQT--MRHV 65 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt--~n~--------------~n~~~------~~i~~mn~lGm--iiDl--SH~s~~t--~~d~ 65 (103)
.+.|+.+.++||-.|.|. +.. +..|| ++|+++.+.|| ++|+ .|+|... |.++
T Consensus 63 ~~~l~yl~~lGv~~i~l~Pi~~~~~~~gY~~~dy~~i~~~~Gt~~d~~~lv~~~h~~gi~vi~D~V~NH~~~~~~wf~~~ 142 (669)
T 3k8k_A 63 TQKLDYLNQLGVKALWLSPIHPCMSYHGYDVTDYTKVNPQLGTESDFDRLVTEAHNRGIKIYLDYVMNHTGTAHPWFTEA 142 (669)
T ss_dssp HTTHHHHHTTTCSEEEECCCSSBSSTTCCSBSCTTSCCTTTCCHHHHHHHHHHHHHTTCEEEEEECCSEEETTSHHHHHH
T ss_pred HHHHHHHHHcCCCEEEecccccCCCCCCCCcccccccccccCCHHHHHHHHHHHHHcCCEEEEEECcccCCCcCHHHHHH
Confidence 347889999999988776 221 12333 99999999876 5564 5887653 5566
Q ss_pred HH
Q psy11267 66 LN 67 (103)
Q Consensus 66 l~ 67 (103)
++
T Consensus 143 ~~ 144 (669)
T 3k8k_A 143 SS 144 (669)
T ss_dssp HH
T ss_pred hh
Confidence 54
No 260
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=20.69 E-value=1.8e+02 Score=18.81 Aligned_cols=44 Identities=16% Similarity=0.184 Sum_probs=31.1
Q ss_pred ccccCCcHHHHHHHHHcCccEEeeccCCCCchHHHHHHHHhcCC
Q psy11267 7 GHSLGNSMAVLRMFYKLGVRYLTLTHACPTPWYLVVRECNRLGM 50 (103)
Q Consensus 7 ~~~l~~~l~~l~~~y~lGvR~i~lt~n~~n~~~~~i~~mn~lGm 50 (103)
..+..+-.+.|+.+.+.|++..-+|-+.......+.+.+.++|+
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl 76 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGI 76 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTC
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCc
Confidence 44556667889999999999888886544333455566677776
No 261
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=20.64 E-value=49 Score=23.35 Aligned_cols=18 Identities=17% Similarity=0.122 Sum_probs=15.6
Q ss_pred CCCCCCCHHHHHHhhhhc
Q psy11267 85 PSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 85 ~~~RNl~De~i~~ia~~~ 102 (103)
++||+++.+++++|.+.+
T Consensus 32 ~SpR~V~~~~a~~i~~~~ 49 (203)
T 1v5x_A 32 GSRRRIAPEAARAIGEAL 49 (203)
T ss_dssp TCTTBCCHHHHHHHHHHS
T ss_pred CCCCcCCHHHHHHHHHhC
Confidence 789999999999997654
No 262
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Probab=20.59 E-value=2e+02 Score=21.57 Aligned_cols=19 Identities=26% Similarity=0.305 Sum_probs=13.1
Q ss_pred HHHHHHHhcCCeeeccCCCH
Q psy11267 40 LVVRECNRLGMLIDLSHTSV 59 (103)
Q Consensus 40 ~~i~~mn~lGmiiDlSH~s~ 59 (103)
+++++..+.|+.+.+ |+.+
T Consensus 233 ~~~~~a~~~g~~v~~-H~~~ 251 (492)
T 2paj_A 233 ETAAVARRLGLRMHS-HLSE 251 (492)
T ss_dssp HHHHHHHHTTCEEEE-ECC-
T ss_pred HHHHHHHHcCCcEEE-EeCC
Confidence 666666777777776 7775
No 263
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=20.54 E-value=2.2e+02 Score=20.67 Aligned_cols=47 Identities=13% Similarity=0.068 Sum_probs=27.7
Q ss_pred HHHHHHHHHcCccEEeeccCCCC---chHHHHHHHHhcCCeeeccCCCHHH
Q psy11267 14 MAVLRMFYKLGVRYLTLTHACPT---PWYLVVRECNRLGMLIDLSHTSVQT 61 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n~~n---~~~~~i~~mn~lGmiiDlSH~s~~t 61 (103)
++.++.+.+.|+..++.-..... .+.++++...+.|+.+. .|+.+..
T Consensus 130 ~~~~~~l~~~g~~~i~~~~~~~~~~~~l~~~~~~a~~~g~~v~-~H~~~~~ 179 (426)
T 2z00_A 130 LTPAGLLREAGAVLLTDDGRTNEDAGVLAAGLLMAAPLGLPVA-VHAEDAG 179 (426)
T ss_dssp BCCHHHHHHHTCCEEECTTSCCCCHHHHHHHHHHHGGGTCCEE-ECCCCHH
T ss_pred HHHHHHHHHcCCEEEECCCcCCCCHHHHHHHHHHHHhhCCEEE-EeCCCHH
Confidence 44555566668776665221111 12277777888898885 5776543
No 264
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=20.52 E-value=1.3e+02 Score=21.05 Aligned_cols=35 Identities=17% Similarity=0.211 Sum_probs=25.0
Q ss_pred CCcHHHHHHHHHcCccEEeeccCCCCchHHHHHHHH
Q psy11267 11 GNSMAVLRMFYKLGVRYLTLTHACPTPWYLVVRECN 46 (103)
Q Consensus 11 ~~~l~~l~~~y~lGvR~i~lt~n~~n~~~~~i~~mn 46 (103)
++-++.++.+.+-|++.++++++..+. .+.++++.
T Consensus 28 ~~~~~~~~al~~gGv~~iel~~k~~~~-~~~i~~l~ 62 (214)
T 1wbh_A 28 EHAVPMAKALVAGGVRVLNVTLRTECA-VDAIRAIA 62 (214)
T ss_dssp GGHHHHHHHHHHTTCCEEEEESCSTTH-HHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCChhH-HHHHHHHH
Confidence 334678999999999999999864322 25666553
No 265
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=20.43 E-value=1.8e+02 Score=19.96 Aligned_cols=82 Identities=6% Similarity=0.021 Sum_probs=48.3
Q ss_pred HHHHHHHHcCccEEeeccCCC--------CchHHHHHHHHhcCCeeecc--CCC----------HHHHHHHHHhc---CC
Q psy11267 15 AVLRMFYKLGVRYLTLTHACP--------TPWYLVVRECNRLGMLIDLS--HTS----------VQTMRHVLNIS---SA 71 (103)
Q Consensus 15 ~~l~~~y~lGvR~i~lt~n~~--------n~~~~~i~~mn~lGmiiDlS--H~s----------~~t~~d~l~~s---~~ 71 (103)
+.++...++|+..+.+..... ....++-+.+.+.|+-+-.- +.. .+.+.++++.+ ..
T Consensus 19 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~ 98 (286)
T 3dx5_A 19 DIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITMISDYLDISLSADFEKTIEKCEQLAILANWFKT 98 (286)
T ss_dssp HHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHHhCC
Confidence 578899999999999832110 11116677778888876543 221 12344444444 79
Q ss_pred CEEEecCCccccCCCCCCCCHHHHHHhhh
Q psy11267 72 PVIFSHSSAFALCPSPRNVPDPVLKLVFP 100 (103)
Q Consensus 72 Pvi~SHs~~ral~~~~RNl~De~i~~ia~ 100 (103)
|.|..|++... +...+++..+.+++
T Consensus 99 ~~v~~~~g~~~----~~~~~~~~~~~~~~ 123 (286)
T 3dx5_A 99 NKIRTFAGQKG----SADFSQQERQEYVN 123 (286)
T ss_dssp CEEEECSCSSC----GGGSCHHHHHHHHH
T ss_pred CEEEEcCCCCC----cccCcHHHHHHHHH
Confidence 99988887542 12334555554444
No 266
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=20.39 E-value=2.7e+02 Score=20.77 Aligned_cols=57 Identities=18% Similarity=0.140 Sum_probs=41.2
Q ss_pred HHHHHcCccEEeeccCC-----CCchHHHHHHHHhcCCeeeccCCCHHHHHHHHHhcCCCEE
Q psy11267 18 RMFYKLGVRYLTLTHAC-----PTPWYLVVRECNRLGMLIDLSHTSVQTMRHVLNISSAPVI 74 (103)
Q Consensus 18 ~~~y~lGvR~i~lt~n~-----~n~~~~~i~~mn~lGmiiDlSH~s~~t~~d~l~~s~~Pvi 74 (103)
-..++||-..+.+.-+. .....+.++-+.+..=+|=+=|.+..+..+..+.++.|||
T Consensus 65 ~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~la~~~~vPVI 126 (301)
T 2ef0_A 65 VAMVHLGGHAVYLDQKQVGIGEREPVRDVAKNLERFVEGIAARVFRHETVEALARHAKVPVV 126 (301)
T ss_dssp HHHHHTTCEEEEEEGGGSCTTTCCCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEE
T ss_pred HHHHHcCCeEEEECCcccccCCCCchHHHHHHHHHhCCEEEEecCChHHHHHHHHHCCCCEE
Confidence 34578888888886542 1223366666666555666779999999999999999998
No 267
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=20.28 E-value=2.6e+02 Score=21.00 Aligned_cols=52 Identities=17% Similarity=0.197 Sum_probs=36.5
Q ss_pred HHHHcCccEEeeccCCCCchH---------HHHHHHHhcCCeeeccCCCHHHHHHHHHhcCCCEE
Q psy11267 19 MFYKLGVRYLTLTHACPTPWY---------LVVRECNRLGMLIDLSHTSVQTMRHVLNISSAPVI 74 (103)
Q Consensus 19 ~~y~lGvR~i~lt~n~~n~~~---------~~i~~mn~lGmiiDlSH~s~~t~~d~l~~s~~Pvi 74 (103)
..++||-..+.+.-+. ...+ .++..|-+ +|=+=|.......+..+.++.|||
T Consensus 66 A~~~LGg~~i~l~~~~-ss~~kgEsl~DTarvls~~~D---~iviR~~~~~~~~~lA~~~~vPVI 126 (309)
T 4f2g_A 66 GIFQLGGHAVFMSTRD-TQLGRGEPVEDSAQVISRMVD---IIMIRTFEQDIIQRFAENSRVPVI 126 (309)
T ss_dssp HHHHTTCEEEEECCSS-CEETBEECHHHHHHHHHHHCS---EEEEECSCHHHHHHHHHTCSSCEE
T ss_pred HHHHcCCeEEEcCccc-ccCCCCCCHHHHHHHHHHhCC---EEEEecCCHHHHHHHHHhCCCCEE
Confidence 4578888888776542 2333 55555532 344568899999999999999998
No 268
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=20.11 E-value=36 Score=23.95 Aligned_cols=28 Identities=36% Similarity=0.396 Sum_probs=21.5
Q ss_pred cccccCCcHHHHHHHHHcCccEEeeccC
Q psy11267 6 GGHSLGNSMAVLRMFYKLGVRYLTLTHA 33 (103)
Q Consensus 6 g~~~l~~~l~~l~~~y~lGvR~i~lt~n 33 (103)
|...++..++.++...+.|++.++.|=.
T Consensus 19 g~~~~e~~~e~i~~A~~~Gi~~i~~TdH 46 (247)
T 2wje_A 19 GPKSREESKALLAESYRQGVRTIVSTSH 46 (247)
T ss_dssp SCSSHHHHHHHHHHHHHTTEEEEECCCE
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCC
Confidence 3444555667999999999999998853
No 269
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=20.10 E-value=2.5e+02 Score=20.27 Aligned_cols=89 Identities=12% Similarity=0.070 Sum_probs=52.3
Q ss_pred cCCcHHHHHHHHHcC-ccEEeeccCCCCchHHHHHHHHhc-CC--eee-----ccCC-CHHHHHHHHHhcCCCEEEecCC
Q psy11267 10 LGNSMAVLRMFYKLG-VRYLTLTHACPTPWYLVVRECNRL-GM--LID-----LSHT-SVQTMRHVLNISSAPVIFSHSS 79 (103)
Q Consensus 10 l~~~l~~l~~~y~lG-vR~i~lt~n~~n~~~~~i~~mn~l-Gm--iiD-----lSH~-s~~t~~d~l~~s~~Pvi~SHs~ 79 (103)
+..-++.|+.+++.| +|++|++-... +.++++.+. ++ ..+ .+=. -...+.+.+...+..|++--.-
T Consensus 138 ~~e~~~ale~l~~~Gkir~iGvSn~~~----~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL 213 (316)
T 1us0_A 138 ILDTWAAMEELVDEGLVKAIGISNFNH----LQVEMILNKPGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPL 213 (316)
T ss_dssp HHHHHHHHHHHHHTTSBSCEEEESCCH----HHHHHHHTCTTCCSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTT
T ss_pred HHHHHHHHHHHHHCCCccEEEEecCCH----HHHHHHHHhCcccCCceeeehhcCCccCCHHHHHHHHHcCCEEEEeccc
Confidence 334567899999999 99999986431 234444332 33 111 1111 1345667777777777665444
Q ss_pred ccccC-----CCCCCCCHHHHHHhhhhc
Q psy11267 80 AFALC-----PSPRNVPDPVLKLVFPYL 102 (103)
Q Consensus 80 ~ral~-----~~~RNl~De~i~~ia~~~ 102 (103)
+.+.. +.|+-+.++.+++||++.
T Consensus 214 ~~G~l~~~~~~~~~~~~~~~l~~ia~~~ 241 (316)
T 1us0_A 214 GSPDRPWAKPEDPSLLEDPRIKAIAAKH 241 (316)
T ss_dssp CCTTCTTCCTTSCCTTTCHHHHHHHHHH
T ss_pred ccCccccccCCCcccccCHHHHHHHHHh
Confidence 44421 124556788999998763
No 270
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=20.09 E-value=2.8e+02 Score=20.69 Aligned_cols=68 Identities=10% Similarity=0.127 Sum_probs=43.8
Q ss_pred HHHHHHHHHcCccEEeeccCCCCc-----------hHHHHHHHHhcCCeeecc----------------CCCH-------
Q psy11267 14 MAVLRMFYKLGVRYLTLTHACPTP-----------WYLVVRECNRLGMLIDLS----------------HTSV------- 59 (103)
Q Consensus 14 l~~l~~~y~lGvR~i~lt~n~~n~-----------~~~~i~~mn~lGmiiDlS----------------H~s~------- 59 (103)
.+.++...++|+..+.+......+ ..++-+.+.+.|+-|-.- +..+
T Consensus 36 ~e~l~~aa~~G~d~VEl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GL~i~~~~~~~f~~p~~~~g~l~~~d~~~r~~~i 115 (394)
T 1xla_A 36 VEAVHKLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDTGLKVPMVTTNLFSHPVFKDGGFTSNDRSIRRFAL 115 (394)
T ss_dssp HHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHCCBCCEEECCCSSSGGGTTCSTTCSSHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEecCCccCcccCCchhhHHHHHHHHHHHHHcCCeEEEEecCccCCccccCCccCCCCHHHHHHHH
Confidence 467899999999999987632111 226777788888866432 2222
Q ss_pred HHHHHHHHhc---CCCEEEecCCcc
Q psy11267 60 QTMRHVLNIS---SAPVIFSHSSAF 81 (103)
Q Consensus 60 ~t~~d~l~~s---~~Pvi~SHs~~r 81 (103)
+.+..+++.+ ..+.|..|++..
T Consensus 116 ~~~~~~i~~A~~LGa~~vvv~~G~~ 140 (394)
T 1xla_A 116 AKVLHNIDLAAEMGAETFVMWGGRE 140 (394)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCTTC
T ss_pred HHHHHHHHHHHHhCCCEEEECCCCC
Confidence 2244444444 689998898743
No 271
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=20.09 E-value=2.9e+02 Score=21.23 Aligned_cols=56 Identities=18% Similarity=0.090 Sum_probs=38.7
Q ss_pred HHHHcCccEEeeccCCC-----CchHHHHHHHHhcCCeeeccCCCHHHHHHHHHhcCCCEE
Q psy11267 19 MFYKLGVRYLTLTHACP-----TPWYLVVRECNRLGMLIDLSHTSVQTMRHVLNISSAPVI 74 (103)
Q Consensus 19 ~~y~lGvR~i~lt~n~~-----n~~~~~i~~mn~lGmiiDlSH~s~~t~~d~l~~s~~Pvi 74 (103)
..++||-..+.+.-... ..+.+-++-+.+..=+|=+=|.......+..+.++.|||
T Consensus 87 A~~~LGg~~i~l~~~~s~l~kgEsl~DTarvLs~~~D~IviR~~~~~~~~~lA~~s~vPVI 147 (353)
T 3sds_A 87 AVVKMGGHPMFLGKDDIQLGVNESLYDTSVVISSMVSCIVARVGPHSDIANLAKHSSVPVI 147 (353)
T ss_dssp HHHHTTCEEEEECTTTC--CCSSCHHHHHHHHHTSCSEEEEECSSHHHHHHHHHHCSSCEE
T ss_pred HHHHcCCeEEecCCccccccCCccHHHHHHHHHHhcCEEEEEeCChHHHHHHHhhCCCCEE
Confidence 45788888877754321 233355555555544555678899999999999999998
Done!