BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1127
(65 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q1HRV8|ELVL1_AEDAE Elongation of very long chain fatty acids protein AAEL008004
OS=Aedes aegypti GN=AAEL008004 PE=2 SV=2
Length = 358
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 37/47 (78%), Positives = 40/47 (85%)
Query: 8 IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQY 54
+QFV IMVHAFQLLFIDCN+PKAFVWWIG HAVMF FLF FY+ Y
Sbjct: 212 VQFVAIMVHAFQLLFIDCNYPKAFVWWIGMHAVMFLFLFNEFYQSTY 258
>sp|Q9EQC4|ELOV4_MOUSE Elongation of very long chain fatty acids protein 4 OS=Mus musculus
GN=Elovl4 PE=1 SV=2
Length = 312
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 8 IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKP--VKTAK 62
+QF + + H L+ DC FPK W + ++A+ F FLF NFY Y +P KT K
Sbjct: 224 VQFHVTIGHTALSLYTDCPFPKWMHWALIAYAISFIFLFLNFYTRTYNEPKQSKTGK 280
>sp|Q9GZR5|ELOV4_HUMAN Elongation of very long chain fatty acids protein 4 OS=Homo sapiens
GN=ELOVL4 PE=1 SV=1
Length = 314
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 8 IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVK 59
IQF + + H L+ DC FPK W + ++A+ F FLF NFY Y +P K
Sbjct: 224 IQFHVTIGHTALSLYTDCPFPKWMHWALIAYAISFIFLFLNFYIRTYKEPKK 275
>sp|Q3S8M4|ELOV4_MACMU Elongation of very long chain fatty acids protein 4 OS=Macaca
mulatta GN=ELOVL4 PE=3 SV=1
Length = 314
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 8 IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVK 59
+QF + + H L+ DC FPK W + ++A+ F FLF NFY Y +P K
Sbjct: 224 VQFHVTIGHTALSLYTDCPFPKWMHWALIAYAISFIFLFLNFYIRTYKEPKK 275
>sp|Q95K73|ELOV4_MACFA Elongation of very long chain fatty acids protein 4 OS=Macaca
fascicularis GN=ELOVL4 PE=2 SV=1
Length = 314
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 8 IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVK 59
+QF + + H L+ DC FPK W + ++A+ F FLF NFY Y +P K
Sbjct: 224 VQFHVTIGHTALSLYTDCPFPKWMHWALIAYAISFIFLFLNFYIRTYKEPKK 275
>sp|D4ADY9|ELOV7_RAT Elongation of very long chain fatty acids protein 7 OS=Rattus
norvegicus GN=Elovl7 PE=3 SV=1
Length = 281
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 8 IQFVLIMVHAFQLLFI-DCNFP-KAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAK 62
+QFVL+ VH Q+ F+ DCN+ F++ I S+ +F LF +F+ Y K + K
Sbjct: 213 VQFVLVTVHIGQIFFMEDCNYQYPVFLYIIMSYGCIFLLLFLHFWYRAYTKGQRLPK 269
>sp|Q9D2Y9|ELOV7_MOUSE Elongation of very long chain fatty acids protein 7 OS=Mus musculus
GN=Elovl7 PE=2 SV=1
Length = 281
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 8 IQFVLIMVHAFQLLFI-DCNFP-KAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAK 62
+QFVL+ +H Q+ F+ DCN+ F++ I S+ +F LF +F+ Y K + K
Sbjct: 213 VQFVLVTIHIGQIFFMEDCNYQYPVFLYIIMSYGCIFLLLFLHFWYRAYTKGQRLPK 269
>sp|Q32NI8|ELOV5_XENLA Elongation of very long chain fatty acids protein 5 OS=Xenopus
laevis GN=elovl5 PE=2 SV=1
Length = 295
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 9 QFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAK 62
QFVL M + C FP ++++ S+ + LF NFY + Y K + +
Sbjct: 209 QFVLTMTQTTCAMIWPCKFPMGWLYFQNSYMISLIILFTNFYLKTYNKKTSSRR 262
>sp|Q9JLJ4|ELOV2_MOUSE Elongation of very long chain fatty acids protein 2 OS=Mus musculus
GN=Elovl2 PE=2 SV=1
Length = 292
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 8 IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQY-VKPVK 59
+QFVL + H + C FP + + S+ + LF NFY + Y KPVK
Sbjct: 211 VQFVLTITHTLSAVVKPCGFPFGCLIFQSSYMMTLVILFLNFYIQTYRKKPVK 263
>sp|A0JNC4|ELOV7_BOVIN Elongation of very long chain fatty acids protein 7 OS=Bos taurus
GN=ELOVL7 PE=2 SV=1
Length = 281
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 8 IQFVLIMVHAFQLLFI-DCNFP-KAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAK 62
IQFVLI +H Q F+ DC + F + I S+ +F LF +F+ Y K + K
Sbjct: 213 IQFVLITIHISQFFFMEDCKYQFPVFQYIIMSYGCIFLLLFLHFWYRAYTKGQRLPK 269
>sp|Q9NXB9|ELOV2_HUMAN Elongation of very long chain fatty acids protein 2 OS=Homo sapiens
GN=ELOVL2 PE=2 SV=2
Length = 296
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 8 IQFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQY-VKPVK 59
+QFVL + H + C FP + + S+ + LF NFY + Y KP+K
Sbjct: 211 VQFVLTITHTMSAVVKPCGFPFGCLIFQSSYMLTLVILFLNFYVQTYRKKPMK 263
>sp|Q5M8U1|ELOV5_XENTR Elongation of very long chain fatty acids protein 5 OS=Xenopus
tropicalis GN=elovl5 PE=2 SV=1
Length = 295
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 9 QFVLIMVHAFQLLFIDCNFPKAFVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAK 62
QFVL M + C FP ++++ + + LF NFY + Y K + +
Sbjct: 209 QFVLTMTQTTCAMIWPCKFPMGWLYFQNCYMISLIILFGNFYIKTYNKKTSSRR 262
>sp|Q9BW60|ELOV1_HUMAN Elongation of very long chain fatty acids protein 1 OS=Homo sapiens
GN=ELOVL1 PE=1 SV=1
Length = 279
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 8 IQFVLIMVHAFQLLFID-CNFPKA----FVWWIGSHAVMFFFLFRNFYKEQYVKPVKTAK 62
IQFVL+ +H Q F+ CN+ +W G+ +FF LF NF+ Y K + +
Sbjct: 207 IQFVLVSLHISQYYFMSSCNYQYPVIIHLIWMYGT---IFFMLFSNFWYHSYTKGKRLPR 263
>sp|Q9JLJ5|ELOV1_MOUSE Elongation of very long chain fatty acids protein 1 OS=Mus musculus
GN=Elovl1 PE=2 SV=1
Length = 279
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 8/54 (14%)
Query: 8 IQFVLIMVHAFQLLFI-DCNFPKA----FVWWIGSHAVMFFFLFRNFYKEQYVK 56
IQFVL+ +H Q F+ CN+ +W G+ +FF LF NF+ Y K
Sbjct: 207 IQFVLVSLHISQYYFMPSCNYQYPIIIHLIWMYGT---IFFILFSNFWYHSYTK 257
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.342 0.148 0.513
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,080,049
Number of Sequences: 539616
Number of extensions: 623081
Number of successful extensions: 1749
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1733
Number of HSP's gapped (non-prelim): 20
length of query: 65
length of database: 191,569,459
effective HSP length: 37
effective length of query: 28
effective length of database: 171,603,667
effective search space: 4804902676
effective search space used: 4804902676
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (22.0 bits)
S2: 55 (25.8 bits)