Query         psy11270
Match_columns 98
No_of_seqs    102 out of 431
Neff          5.6 
Searched_HMMs 29240
Date          Fri Aug 16 22:36:38 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy11270.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11270hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3iqu_A 14-3-3 protein sigma; s 100.0 3.8E-42 1.3E-46  259.3   6.8   85    1-85    128-212 (236)
  2 3uzd_A 14-3-3 protein gamma; s 100.0 7.9E-42 2.7E-46  259.1   6.3   91    1-93    126-216 (248)
  3 3ubw_A 14-3-3E, 14-3-3 protein 100.0 1.7E-41 5.9E-46  258.8   6.3   91    1-93    151-241 (261)
  4 2br9_A 14-3-3E, 14-3-3 protein 100.0 3.5E-41 1.2E-45  253.6   6.1   85    1-85    125-209 (234)
  5 1o9d_A 14-3-3-like protein C;  100.0   5E-41 1.7E-45  256.1   6.0   91    1-93    130-220 (260)
  6 2npm_A 14-3-3 domain containin 100.0 7.6E-41 2.6E-45  255.1   6.0   83    1-84    151-233 (260)
  7 3efz_A 14-3-3 protein; 14-3-3, 100.0 6.8E-41 2.3E-45  256.3   3.6   85    1-85    147-236 (268)
  8 2o8p_A 14-3-3 domain containin 100.0 3.1E-37   1E-41  231.5   5.4   74    1-79    125-198 (227)
  9 3qwp_A SET and MYND domain-con  95.3   0.043 1.5E-06   42.9   6.6   56   22-78    345-400 (429)
 10 3n71_A Histone lysine methyltr  95.0   0.057 1.9E-06   43.1   6.7   56   22-78    367-422 (490)
 11 3qww_A SET and MYND domain-con  94.7   0.071 2.4E-06   41.9   6.5   55   23-78    315-369 (433)
 12 3qww_A SET and MYND domain-con  94.7   0.081 2.8E-06   41.6   6.6   56   22-78    356-411 (433)
 13 3n71_A Histone lysine methyltr  94.4   0.095 3.3E-06   41.8   6.5   56   23-79    326-381 (490)
 14 3edt_B KLC 2, kinesin light ch  94.2    0.11 3.6E-06   34.8   5.5   57   22-79    101-157 (283)
 15 3edt_B KLC 2, kinesin light ch  93.7    0.27 9.1E-06   32.8   6.8   57   22-79    143-199 (283)
 16 3u3w_A Transcriptional activat  93.5    0.24 8.2E-06   34.9   6.7   59   22-82    171-229 (293)
 17 3qwp_A SET and MYND domain-con  93.3   0.098 3.3E-06   40.8   4.6   55   23-78    304-358 (429)
 18 3nf1_A KLC 1, kinesin light ch  92.5    0.52 1.8E-05   32.0   7.0   57   22-79    169-225 (311)
 19 4gcn_A Protein STI-1; structur  92.4    0.53 1.8E-05   29.4   6.5   48   22-78     24-71  (127)
 20 3nf1_A KLC 1, kinesin light ch  90.4     0.6 2.1E-05   31.6   5.5   59   22-81    127-185 (311)
 21 3rkv_A Putative peptidylprolyl  88.7    0.86 2.9E-05   28.9   5.0   56   22-78     27-92  (162)
 22 3ro3_A PINS homolog, G-protein  88.6       2 6.7E-05   25.6   6.4   55   22-80     25-80  (164)
 23 4gco_A Protein STI-1; structur  88.0     2.1 7.2E-05   26.7   6.5   47   22-77     29-75  (126)
 24 3ro3_A PINS homolog, G-protein  87.9     2.9 9.9E-05   24.9   7.0   56   22-80     65-120 (164)
 25 2qfc_A PLCR protein; TPR, HTH,  87.1     1.7 5.7E-05   30.5   6.1   55   22-79    171-226 (293)
 26 4g1t_A Interferon-induced prot  86.5     2.1 7.3E-05   31.3   6.5   54   22-76     67-121 (472)
 27 3gw4_A Uncharacterized protein  86.5     4.2 0.00014   25.8   7.3   55   22-79     82-137 (203)
 28 3ro2_A PINS homolog, G-protein  85.5     3.9 0.00013   27.4   7.1   54   22-80     21-74  (338)
 29 1hz4_A MALT regulatory protein  85.3     3.8 0.00013   29.1   7.3   57   22-79    109-165 (373)
 30 4gcn_A Protein STI-1; structur  85.1     3.5 0.00012   25.5   6.3   54   22-77     58-111 (127)
 31 2l6j_A TPR repeat-containing p  84.7     3.7 0.00013   23.4   5.9   47   22-77     20-66  (111)
 32 3vtx_A MAMA; tetratricopeptide  84.6     3.8 0.00013   25.9   6.5   47   22-77    123-169 (184)
 33 1elr_A TPR2A-domain of HOP; HO  83.7     4.6 0.00016   23.3   6.1   55   22-78     54-108 (131)
 34 2xev_A YBGF; tetratricopeptide  82.2     5.7  0.0002   23.3   6.3   49   23-77     56-104 (129)
 35 2dba_A Smooth muscle cell asso  82.0     4.4 0.00015   24.2   5.7   49   23-77     45-93  (148)
 36 3ulq_A Response regulator aspa  81.6     4.9 0.00017   28.8   6.7   55   22-80    200-255 (383)
 37 3k9i_A BH0479 protein; putativ  80.9     6.8 0.00023   23.3   6.7   48   22-78     43-90  (117)
 38 1na3_A Designed protein CTPR2;  80.8     5.2 0.00018   22.0   6.5   48   22-78     25-72  (91)
 39 4a1s_A PINS, partner of inscut  80.8     7.4 0.00025   27.6   7.3   55   22-81     64-118 (411)
 40 3gw4_A Uncharacterized protein  80.7     6.6 0.00023   24.8   6.5   56   22-80    123-178 (203)
 41 2kck_A TPR repeat; tetratricop  80.2     5.9  0.0002   22.2   6.5   47   22-77     22-68  (112)
 42 3ma5_A Tetratricopeptide repea  80.1     6.9 0.00024   22.9   6.6   49   22-79     23-71  (100)
 43 3q15_A PSP28, response regulat  79.3     6.8 0.00023   28.2   6.8   54   22-79    198-252 (378)
 44 3sf4_A G-protein-signaling mod  78.2     8.6  0.0003   26.8   6.9   53   22-80     25-78  (406)
 45 2xev_A YBGF; tetratricopeptide  78.2     8.1 0.00028   22.6   6.1   51   22-78     18-68  (129)
 46 3sz7_A HSC70 cochaperone (SGT)  77.4     9.9 0.00034   23.8   6.5   47   22-77     27-73  (164)
 47 4gco_A Protein STI-1; structur  77.2      10 0.00035   23.3   6.5   47   22-77     63-109 (126)
 48 3vtx_A MAMA; tetratricopeptide  77.1      10 0.00034   23.9   6.5   47   22-77     21-67  (184)
 49 3sf4_A G-protein-signaling mod  76.6     9.3 0.00032   26.7   6.7   58   20-80    161-218 (406)
 50 3upv_A Heat shock protein STI1  76.0     9.9 0.00034   22.5   6.5   47   22-77     20-66  (126)
 51 3q15_A PSP28, response regulat  76.0     9.3 0.00032   27.4   6.7   54   22-79    238-291 (378)
 52 2qfc_A PLCR protein; TPR, HTH,  75.9      11 0.00039   26.1   7.0   53   22-77    212-265 (293)
 53 2lni_A Stress-induced-phosphop  75.3     9.6 0.00033   22.0   6.5   48   22-78     66-113 (133)
 54 3ulq_A Response regulator aspa  75.2      12 0.00042   26.7   7.1   58   22-81    159-216 (383)
 55 1qqe_A Vesicular transport pro  75.1      11 0.00036   26.4   6.7   53   23-78     54-106 (292)
 56 2kc7_A BFR218_protein; tetratr  74.5     9.4 0.00032   21.6   6.7   49   22-78     16-64  (99)
 57 2ooe_A Cleavage stimulation fa  74.3     4.9 0.00017   30.5   5.0   53   22-83     62-114 (530)
 58 2vgx_A Chaperone SYCD; alterna  74.3      13 0.00045   23.4   6.5   47   22-77     71-117 (148)
 59 3q49_B STIP1 homology and U bo  74.2      11 0.00038   22.3   6.5   47   22-77     25-71  (137)
 60 3ro2_A PINS homolog, G-protein  74.0      12 0.00042   24.9   6.5   53   23-78    200-252 (338)
 61 3sz7_A HSC70 cochaperone (SGT)  73.9      14 0.00047   23.1   6.5   48   22-78     61-108 (164)
 62 2vq2_A PILW, putative fimbrial  73.8      12 0.00041   23.6   6.2   48   23-77     94-141 (225)
 63 3k9i_A BH0479 protein; putativ  73.6     6.3 0.00022   23.5   4.5   50   23-78      7-56  (117)
 64 2fbn_A 70 kDa peptidylprolyl i  71.8      17 0.00057   23.5   6.6   50   22-77     54-116 (198)
 65 3upv_A Heat shock protein STI1  71.8      13 0.00044   22.0   6.5   49   22-79     54-102 (126)
 66 3uq3_A Heat shock protein STI1  71.5      14 0.00047   23.9   6.1   54   22-77     54-107 (258)
 67 4a1s_A PINS, partner of inscut  71.1      21  0.0007   25.3   7.4   58   21-81    198-255 (411)
 68 2hr2_A Hypothetical protein; a  71.1      20 0.00069   24.5   7.1   54   22-77     27-85  (159)
 69 1ihg_A Cyclophilin 40; ppiase   71.0     5.1 0.00017   29.9   4.3   55   22-77    239-301 (370)
 70 4g1t_A Interferon-induced prot  70.9     8.8  0.0003   27.9   5.5   50   22-76    350-399 (472)
 71 1zu2_A Mitochondrial import re  70.6     4.1 0.00014   28.1   3.5   24   12-35      8-31  (158)
 72 3u3w_A Transcriptional activat  70.2      19 0.00064   24.9   6.9   55   22-79    212-267 (293)
 73 1a17_A Serine/threonine protei  69.9      15 0.00053   22.1   6.5   46   23-77     64-109 (166)
 74 1elr_A TPR2A-domain of HOP; HO  69.7      13 0.00045   21.2   6.6   50   22-80     20-69  (131)
 75 4ga2_A E3 SUMO-protein ligase   69.3      18 0.00063   22.7   6.5   47   22-77     47-93  (150)
 76 3hym_B Cell division cycle pro  69.2      23 0.00078   23.8   7.2   56   22-78    209-265 (330)
 77 2fbn_A 70 kDa peptidylprolyl i  68.3      21 0.00072   23.0   6.6   48   22-78    104-151 (198)
 78 1elw_A TPR1-domain of HOP; HOP  68.0      14 0.00046   20.7   5.9   15   62-76     85-99  (118)
 79 2pl2_A Hypothetical conserved   68.0      19 0.00066   23.8   6.5   47   22-77    100-146 (217)
 80 3gyz_A Chaperone protein IPGC;  67.9      15 0.00052   23.8   5.7   47   22-77     86-132 (151)
 81 2ho1_A Type 4 fimbrial biogene  67.8      14 0.00049   24.1   5.7   34   43-77    136-169 (252)
 82 2kat_A Uncharacterized protein  67.6      16 0.00054   21.3   6.6   48   22-78     35-82  (115)
 83 1hh8_A P67PHOX, NCF-2, neutrop  67.5      21 0.00073   22.7   6.5   47   22-77     53-99  (213)
 84 2e2e_A Formate-dependent nitri  67.3      20 0.00069   22.4   6.5   27   50-77    117-143 (177)
 85 3urz_A Uncharacterized protein  66.6      23 0.00078   23.3   6.6   47   22-77     70-116 (208)
 86 1wao_1 Serine/threonine protei  66.5      16 0.00055   28.1   6.5   46   22-76     22-67  (477)
 87 2vyi_A SGTA protein; chaperone  66.3      16 0.00053   20.8   6.5   46   23-77     63-108 (131)
 88 2lni_A Stress-induced-phosphop  66.1      11 0.00037   21.8   4.4   46   23-77     33-78  (133)
 89 2vyi_A SGTA protein; chaperone  66.0      16 0.00054   20.7   6.5   48   22-78     28-75  (131)
 90 1a17_A Serine/threonine protei  65.8      19 0.00066   21.6   6.5   48   22-78     29-76  (166)
 91 2xcb_A PCRH, regulatory protei  65.7      20  0.0007   21.9   6.5   48   22-78     68-115 (142)
 92 3ub0_A Non-structural protein   65.4     6.3 0.00021   28.6   3.6   37   22-78     19-55  (199)
 93 2dba_A Smooth muscle cell asso  65.0      19 0.00064   21.2   6.6   48   22-78     81-128 (148)
 94 1xnf_A Lipoprotein NLPI; TPR,   64.6      26 0.00088   22.9   6.5   47   22-77     93-139 (275)
 95 1p5q_A FKBP52, FK506-binding p  64.3      15 0.00051   26.6   5.6   55   22-77    163-224 (336)
 96 2ifu_A Gamma-SNAP; membrane fu  63.8      27 0.00091   24.5   6.8   54   22-79    131-185 (307)
 97 3u4t_A TPR repeat-containing p  63.6      11 0.00039   24.8   4.5   54   24-78    197-250 (272)
 98 4b4t_Q 26S proteasome regulato  63.4      36  0.0012   24.3   7.5   57   22-81    111-167 (434)
 99 3rkv_A Putative peptidylprolyl  62.8      25 0.00084   21.8   6.5   47   23-78     80-126 (162)
100 1kt0_A FKBP51, 51 kDa FK506-bi  62.3      18 0.00062   27.5   6.0   54   22-77    284-345 (457)
101 3q49_B STIP1 homology and U bo  62.0      22 0.00074   20.9   6.5   49   22-79     59-107 (137)
102 2r17_C Vacuolar protein sortin  62.0     3.8 0.00013   31.3   2.0   42   22-63    211-253 (298)
103 1xnf_A Lipoprotein NLPI; TPR,   61.8      30   0.001   22.6   6.5   46   23-77     60-105 (275)
104 1zu2_A Mitochondrial import re  61.8      15 0.00051   25.1   4.9   57   15-76     55-118 (158)
105 1elw_A TPR1-domain of HOP; HOP  60.4      20 0.00067   19.9   6.6   48   22-78     20-67  (118)
106 2c2l_A CHIP, carboxy terminus   60.2      19 0.00066   25.2   5.4   11   24-34     22-32  (281)
107 1hz4_A MALT regulatory protein  59.1      26  0.0009   24.6   6.0   54   22-79     30-83  (373)
108 4eqf_A PEX5-related protein; a  58.9      31  0.0011   24.0   6.3   47   23-78    264-310 (365)
109 4abn_A Tetratricopeptide repea  58.9      28 0.00094   26.4   6.5   51   21-77    236-286 (474)
110 1na0_A Designed protein CTPR3;  58.8      22 0.00074   19.9   6.5   24   53-77     82-105 (125)
111 1qqe_A Vesicular transport pro  58.6      37  0.0013   23.5   6.7   54   22-78     93-147 (292)
112 2ond_A Cleavage stimulation fa  57.7      23  0.0008   24.7   5.5   45   23-76    186-230 (308)
113 1fch_A Peroxisomal targeting s  57.6      21 0.00071   24.7   5.2   60   22-82    301-363 (368)
114 3ieg_A DNAJ homolog subfamily   57.6      30   0.001   23.3   5.9   15   62-76    319-333 (359)
115 4i17_A Hypothetical protein; T  57.3      36  0.0012   22.0   6.5   27   50-77     78-104 (228)
116 4i17_A Hypothetical protein; T  55.8      39  0.0013   21.9   6.1   48   22-77     23-70  (228)
117 3qky_A Outer membrane assembly  55.8      40  0.0014   22.5   6.3   50   22-77    113-176 (261)
118 2y4t_A DNAJ homolog subfamily   54.8      27 0.00091   24.9   5.5   51   22-77    273-323 (450)
119 4ga2_A E3 SUMO-protein ligase   54.6      35  0.0012   21.3   5.5   46   22-76     81-127 (150)
120 2hr2_A Hypothetical protein; a  54.5      26 0.00088   23.9   5.2   55   22-77     73-130 (159)
121 2ifu_A Gamma-SNAP; membrane fu  54.5      27 0.00094   24.4   5.5   54   22-78     52-105 (307)
122 3qky_A Outer membrane assembly  53.3      42  0.0014   22.4   6.1   50   23-78     32-81  (261)
123 3uq3_A Heat shock protein STI1  52.6      43  0.0015   21.4   6.5   47   22-77    155-201 (258)
124 3gyz_A Chaperone protein IPGC;  52.3      44  0.0015   21.5   6.5   47   22-77     52-98  (151)
125 2q7f_A YRRB protein; TPR, prot  52.2      43  0.0015   21.3   6.5   47   22-77     73-119 (243)
126 3u4t_A TPR repeat-containing p  51.3      44  0.0015   21.8   5.9   47   22-77     19-65  (272)
127 4gyw_A UDP-N-acetylglucosamine  51.2      37  0.0013   28.0   6.5   46   22-76     93-138 (723)
128 1hh8_A P67PHOX, NCF-2, neutrop  51.2      33  0.0011   21.7   5.1   49   22-76     87-148 (213)
129 1fch_A Peroxisomal targeting s  51.2      56  0.0019   22.4   6.6   47   23-78    268-314 (368)
130 4eqf_A PEX5-related protein; a  51.1      52  0.0018   22.8   6.5   47   22-77    115-161 (365)
131 1p5q_A FKBP52, FK506-binding p  50.9      49  0.0017   23.8   6.5   47   22-77    212-258 (336)
132 2kat_A Uncharacterized protein  50.7      34  0.0012   19.7   5.6   44   25-77      4-47  (115)
133 2ho1_A Type 4 fimbrial biogene  50.5      39  0.0013   21.9   5.4   47   22-77     87-133 (252)
134 3u64_A Protein TP_0956; tetrat  50.3      18 0.00061   27.6   4.1   48   22-77    220-268 (301)
135 4gyw_A UDP-N-acetylglucosamine  49.9      41  0.0014   27.8   6.5   46   22-76     25-70  (723)
136 2xcb_A PCRH, regulatory protei  49.9      41  0.0014   20.4   6.5   47   22-77     34-80  (142)
137 1wao_1 Serine/threonine protei  49.6      37  0.0013   26.0   5.9   47   22-77     56-102 (477)
138 2xpi_A Anaphase-promoting comp  48.6      80  0.0027   23.4   7.8   55   22-78    491-545 (597)
139 2vgx_A Chaperone SYCD; alterna  48.6      47  0.0016   20.7   6.5   47   22-77     37-83  (148)
140 2ond_A Cleavage stimulation fa  48.6      45  0.0015   23.2   5.8   12   22-33    115-126 (308)
141 3ieg_A DNAJ homolog subfamily   47.6      52  0.0018   22.1   5.8   51   22-78    250-301 (359)
142 2q7f_A YRRB protein; TPR, prot  47.6      52  0.0018   20.9   5.9   16   62-77    206-221 (243)
143 2yhc_A BAMD, UPF0169 lipoprote  43.9      66  0.0023   21.1   6.9   50   22-77     20-69  (225)
144 2pl2_A Hypothetical conserved   43.7      67  0.0023   21.1   5.9   47   22-77     21-67  (217)
145 2gw1_A Mitochondrial precursor  43.5      80  0.0027   22.6   6.6   57   21-78    204-266 (514)
146 2ooe_A Cleavage stimulation fa  43.1      80  0.0027   23.7   6.8   17   59-75    401-417 (530)
147 1hxi_A PEX5, peroxisome target  43.1      53  0.0018   19.7   6.5   47   22-77     33-79  (121)
148 2e2e_A Formate-dependent nitri  42.9      58   0.002   20.1   6.4   48   22-77     60-109 (177)
149 2fo7_A Synthetic consensus TPR  42.8      43  0.0015   18.7   5.9   16   62-77     82-97  (136)
150 3as5_A MAMA; tetratricopeptide  42.3      54  0.0018   19.6   7.8   16   62-77    157-172 (186)
151 2if4_A ATFKBP42; FKBP-like, al  42.2      24 0.00083   25.5   3.6   49   23-77    196-258 (338)
152 4b4t_Q 26S proteasome regulato  41.5      52  0.0018   23.4   5.3   56   22-79    191-246 (434)
153 3cv0_A Peroxisome targeting si  41.1      77  0.0026   21.0   6.5   25   53-78    245-269 (327)
154 1ouv_A Conserved hypothetical   40.5      74  0.0025   21.1   5.7   46   22-77     22-70  (273)
155 2c2l_A CHIP, carboxy terminus   39.6      47  0.0016   23.1   4.7   47   23-78     55-101 (281)
156 4abn_A Tetratricopeptide repea  39.2      73  0.0025   24.0   6.0   45   23-76    120-164 (474)
157 2wb7_A PT26-6P; extra chromoso  39.1      93  0.0032   25.6   6.8   64   11-75    437-513 (526)
158 2vsy_A XCC0866; transferase, g  38.5      89  0.0031   23.7   6.5   15   62-76    104-118 (568)
159 1h3z_A Hypothetical 62.8 kDa p  37.9      19 0.00065   22.8   2.2   22   71-92     88-109 (109)
160 3cv0_A Peroxisome targeting si  37.9      87   0.003   20.8   6.5   15   62-76    219-233 (327)
161 2vsy_A XCC0866; transferase, g  36.8      66  0.0022   24.5   5.4   48   22-78     39-86  (568)
162 3hym_B Cell division cycle pro  35.9      95  0.0032   20.6   5.9   47   23-78    176-222 (330)
163 2vq2_A PILW, putative fimbrial  35.6      79  0.0027   19.6   6.6   48   22-78    129-176 (225)
164 2y4t_A DNAJ homolog subfamily   34.5   1E+02  0.0036   21.7   5.9   47   22-77    311-357 (450)
165 2ia9_A Putative septation prot  34.0      30   0.001   22.3   2.6   35    6-40     60-94  (100)
166 3mkr_A Coatomer subunit epsilo  33.6 1.2E+02  0.0041   21.1   6.7   47   22-77    182-228 (291)
167 1ihg_A Cyclophilin 40; ppiase   33.0      85  0.0029   23.1   5.4   47   23-78    290-336 (370)
168 3fp2_A TPR repeat-containing p  32.5 1.4E+02  0.0048   21.6   6.5   48   22-78    444-491 (537)
169 2v5f_A Prolyl 4-hydroxylase su  32.3      79  0.0027   18.6   7.4   55   22-78     21-75  (104)
170 4h7y_A Dual specificity protei  31.1      55  0.0019   22.9   3.8   50   20-75     33-86  (161)
171 1h3l_A RNA polymerase sigma fa  30.7      76  0.0026   18.0   4.0   25   60-84     31-55  (87)
172 2xpn_B SPT6, chromatin structu  30.3      11 0.00039   18.7   0.1   13    2-14     11-23  (26)
173 3s0r_A De novo designed helica  30.0      54  0.0018   16.5   2.6   15   65-79      3-17  (30)
174 1j6w_A Autoinducer-2 productio  29.7 1.2E+02   0.004   21.5   5.4   67   17-92     96-163 (175)
175 1w3b_A UDP-N-acetylglucosamine  28.7 1.5E+02  0.0051   20.6   5.9   14   62-75    250-263 (388)
176 2gw1_A Mitochondrial precursor  28.5 1.6E+02  0.0055   21.0   6.5   48   22-78    431-478 (514)
177 1vje_A Autoinducer-2 productio  27.9      64  0.0022   22.7   3.7   67   17-94     95-162 (166)
178 3fp2_A TPR repeat-containing p  27.6 1.7E+02   0.006   21.1   7.0   55   24-78    213-272 (537)
179 1kt0_A FKBP51, 51 kDa FK506-bi  27.4 1.5E+02   0.005   22.3   6.0   46   22-76    333-378 (457)
180 3iv4_A Putative oxidoreductase  26.8      23 0.00079   23.0   1.1   22   74-98     15-36  (112)
181 3rjv_A Putative SEL1 repeat pr  26.0 1.4E+02  0.0048   19.5   5.8   48   22-78    145-197 (212)
182 2pzi_A Probable serine/threoni  25.6 1.2E+02   0.004   24.2   5.4   53   23-76    408-460 (681)
183 1w3b_A UDP-N-acetylglucosamine  25.2 1.7E+02   0.006   20.3   6.3   46   23-77    254-299 (388)
184 2if4_A ATFKBP42; FKBP-like, al  23.9 1.2E+02  0.0041   21.7   4.7   45   23-76    247-291 (338)
185 2r5s_A Uncharacterized protein  21.1 1.6E+02  0.0054   18.3   5.4   43   25-76     93-135 (176)
186 2g0u_A Type III secretion syst  20.3      31  0.0011   22.1   0.7   46   45-91      5-50  (92)
187 2xpi_A Anaphase-promoting comp  20.1 2.7E+02  0.0091   20.5   6.7   48   22-78    532-579 (597)

No 1  
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=100.00  E-value=3.8e-42  Score=259.30  Aligned_cols=85  Identities=59%  Similarity=0.925  Sum_probs=83.5

Q ss_pred             CccccchhhhcccCCcchhHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHH
Q psy11270          1 MKGDYYRYLAEVATGDTRNAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSCI   80 (98)
Q Consensus         1 mKGDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~Ai   80 (98)
                      ||||||||+|||..|++|++++++|+++|++|.++|+.+|||||||||||+||||||||||+|+|++||+|||+|||+||
T Consensus       128 mKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai  207 (236)
T 3iqu_A          128 MKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAM  207 (236)
T ss_dssp             HHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcchh
Q psy11270         81 GASRV   85 (98)
Q Consensus        81 ~~~d~   85 (98)
                      +++|+
T Consensus       208 ~eld~  212 (236)
T 3iqu_A          208 ADLHT  212 (236)
T ss_dssp             HHGGG
T ss_pred             HHhhc
Confidence            99983


No 2  
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=100.00  E-value=7.9e-42  Score=259.11  Aligned_cols=91  Identities=65%  Similarity=1.023  Sum_probs=86.6

Q ss_pred             CccccchhhhcccCCcchhHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHH
Q psy11270          1 MKGDYYRYLAEVATGDTRNAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSCI   80 (98)
Q Consensus         1 mKGDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~Ai   80 (98)
                      ||||||||||||..|++|++++++|+++|++|.++|+.+|||||||||||+||||||||||+|+|++||+|||+|||+||
T Consensus       126 mKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai  205 (248)
T 3uzd_A          126 MKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAI  205 (248)
T ss_dssp             HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcchhccccCCcc
Q psy11270         81 GASRVQILSVPRY   93 (98)
Q Consensus        81 ~~~d~~~~~~~~~   93 (98)
                      +++|  .++...|
T Consensus       206 ~eld--~l~eesy  216 (248)
T 3uzd_A          206 AELD--TLNEDSY  216 (248)
T ss_dssp             HTGG--GCCTTTH
T ss_pred             HHhh--cCCccch
Confidence            9998  4555444


No 3  
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=100.00  E-value=1.7e-41  Score=258.78  Aligned_cols=91  Identities=60%  Similarity=0.918  Sum_probs=86.4

Q ss_pred             CccccchhhhcccCCcchhHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHH
Q psy11270          1 MKGDYYRYLAEVATGDTRNAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSCI   80 (98)
Q Consensus         1 mKGDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~Ai   80 (98)
                      ||||||||+|||..|++|++++++|+++|++|.++|+++|||||||||||+||||||||||+|+|++||+|||+|||+||
T Consensus       151 MKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai  230 (261)
T 3ubw_A          151 MKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAI  230 (261)
T ss_dssp             HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH
T ss_pred             hhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcchhccccCCcc
Q psy11270         81 GASRVQILSVPRY   93 (98)
Q Consensus        81 ~~~d~~~~~~~~~   93 (98)
                      +++|  .++...|
T Consensus       231 ~eLd--~L~eesy  241 (261)
T 3ubw_A          231 AELD--TLSEESY  241 (261)
T ss_dssp             HTGG--GCCTTTH
T ss_pred             HHhh--ccChhhh
Confidence            9998  4554443


No 4  
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=100.00  E-value=3.5e-41  Score=253.59  Aligned_cols=85  Identities=61%  Similarity=0.940  Sum_probs=83.6

Q ss_pred             CccccchhhhcccCCcchhHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHH
Q psy11270          1 MKGDYYRYLAEVATGDTRNAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSCI   80 (98)
Q Consensus         1 mKGDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~Ai   80 (98)
                      ||||||||+|||..|++|++++++|+++|++|.++|+.+|||||||||||+||||||||||+|+|++||+|||+|||+||
T Consensus       125 mKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai  204 (234)
T 2br9_A          125 MKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAI  204 (234)
T ss_dssp             HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH
T ss_pred             HhccHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999998999999999999999999999999999999999999999999


Q ss_pred             hcchh
Q psy11270         81 GASRV   85 (98)
Q Consensus        81 ~~~d~   85 (98)
                      +++|+
T Consensus       205 ~eld~  209 (234)
T 2br9_A          205 AELDT  209 (234)
T ss_dssp             HTGGG
T ss_pred             Hhhhc
Confidence            99993


No 5  
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=100.00  E-value=5e-41  Score=256.06  Aligned_cols=91  Identities=58%  Similarity=0.909  Sum_probs=84.4

Q ss_pred             CccccchhhhcccCCcchhHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHH
Q psy11270          1 MKGDYYRYLAEVATGDTRNAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSCI   80 (98)
Q Consensus         1 mKGDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~Ai   80 (98)
                      ||||||||+|||..|++|++++++|+++|++|.++|+.+|||||||||||+||||||||||+|+|++||+|||+|||+||
T Consensus       130 MKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai  209 (260)
T 1o9d_A          130 MKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI  209 (260)
T ss_dssp             HHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH
T ss_pred             HhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999998999999999999999999999999999999999999999999


Q ss_pred             hcchhccccCCcc
Q psy11270         81 GASRVQILSVPRY   93 (98)
Q Consensus        81 ~~~d~~~~~~~~~   93 (98)
                      +++|+  ++.-.|
T Consensus       210 ~eld~--L~Eesy  220 (260)
T 1o9d_A          210 AELDT--LGEESY  220 (260)
T ss_dssp             HHHHH--TC----
T ss_pred             Hhhhc--cChhhh
Confidence            99983  444433


No 6  
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=100.00  E-value=7.6e-41  Score=255.12  Aligned_cols=83  Identities=52%  Similarity=0.832  Sum_probs=82.2

Q ss_pred             CccccchhhhcccCCcchhHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHH
Q psy11270          1 MKGDYYRYLAEVATGDTRNAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSCI   80 (98)
Q Consensus         1 mKGDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~Ai   80 (98)
                      ||||||||+|||..|++|++++++|+++|++|.++| .+|||||||||||+||||||||||+|++++||+|||+|||+||
T Consensus       151 MKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai  229 (260)
T 2npm_A          151 MKGDYHRYISEFSTGDSKQSSAEDALKAYKDATVVA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAI  229 (260)
T ss_dssp             HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH
T ss_pred             HhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence            899999999999999999999999999999999999 8999999999999999999999999999999999999999999


Q ss_pred             hcch
Q psy11270         81 GASR   84 (98)
Q Consensus        81 ~~~d   84 (98)
                      +++|
T Consensus       230 ~eld  233 (260)
T 2npm_A          230 EQLD  233 (260)
T ss_dssp             TTGG
T ss_pred             Hhhh
Confidence            9998


No 7  
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=100.00  E-value=6.8e-41  Score=256.27  Aligned_cols=85  Identities=25%  Similarity=0.523  Sum_probs=81.6

Q ss_pred             CccccchhhhcccCCcchhHHHHHHHHHHHHHHHHHHhcC--CCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270          1 MKGDYYRYLAEVATGDTRNAVVEDSQKAYQEAFDIAKSKM--QPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus         1 mKGDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~A~~~L--~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      ||||||||+|||..|++|++++++|+++|++|.++|+++|  ||||||||||+||||||||||+|+|++||+|||+|||+
T Consensus       147 MKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde  226 (268)
T 3efz_A          147 LKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA  226 (268)
T ss_dssp             HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred             ccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence            8999999999999999999999999999999999999999  99999999999999999999999999999999999999


Q ss_pred             ---HHhcchh
Q psy11270         79 ---CIGASRV   85 (98)
Q Consensus        79 ---Ai~~~d~   85 (98)
                         ||+++|+
T Consensus       227 ~~~AIaeld~  236 (268)
T 3efz_A          227 AENSRSDSEQ  236 (268)
T ss_dssp             HHHTCCC--C
T ss_pred             HHHHHHHhcc
Confidence               9999983


No 8  
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=100.00  E-value=3.1e-37  Score=231.53  Aligned_cols=74  Identities=22%  Similarity=0.277  Sum_probs=72.1

Q ss_pred             CccccchhhhcccCCcchhHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHH
Q psy11270          1 MKGDYYRYLAEVATGDTRNAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSC   79 (98)
Q Consensus         1 mKGDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~A   79 (98)
                      ||||||||+|||..|+     +++|+++|++|.++|+++|||||||||||+||||||||||+|+|++||.|||+||+.+
T Consensus       125 MKGDYyRYlAE~~~g~-----~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~  198 (227)
T 2o8p_A          125 VKSDISRYKLEFGLCS-----LEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKIL  198 (227)
T ss_dssp             HHHHHHHHHHHTTSSC-----HHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred             HhhhHHHHHHHHcccc-----HHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence            8999999999999998     9999999999999999999999999999999999999999999999999999999964


No 9  
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=95.30  E-value=0.043  Score=42.88  Aligned_cols=56  Identities=9%  Similarity=0.001  Sum_probs=49.6

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      -++|...|++++++-++.++|.||.......|.++-|.. .++.++|..+-++|++-
T Consensus       345 ~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~-~g~~~eA~~~~~~Al~i  400 (429)
T 3qwp_A          345 LEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLH-QGMFPQAMKNLRLAFDI  400 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHH
Confidence            457999999999999999999999999999999888776 79999999999988653


No 10 
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=95.03  E-value=0.057  Score=43.14  Aligned_cols=56  Identities=4%  Similarity=-0.122  Sum_probs=49.9

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      -++|...|++|+++-++.|+|.||--+....|.++.|.. .++.++|..+-++|++-
T Consensus       367 ~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~-~G~~~eA~~~~~~Al~i  422 (490)
T 3n71_A          367 YEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWH-AGHIEVGHGMICKAYAI  422 (490)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHH
Confidence            457999999999999999999999999999999888876 69999999999998754


No 11 
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=94.73  E-value=0.071  Score=41.92  Aligned_cols=55  Identities=5%  Similarity=-0.024  Sum_probs=48.3

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         23 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        23 ~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      ++|...|++++++.++.|.|.||-.+...-|.+.-|.. +++.++|..+.+++++-
T Consensus       315 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i  369 (433)
T 3qww_A          315 SELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIKP  369 (433)
T ss_dssp             HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHH
Confidence            56788999999999999999999999988888777665 79999999999998654


No 12 
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=94.66  E-value=0.081  Score=41.59  Aligned_cols=56  Identities=13%  Similarity=0.000  Sum_probs=49.5

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      -++|...|++|+++-++.|+|.||--.....|.++-|.. .++.++|..+-++|++-
T Consensus       356 ~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~-qg~~~eA~~~~~~Al~i  411 (433)
T 3qww_A          356 WEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMG-LENKAAGEKALKKAIAI  411 (433)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHHH
Confidence            457999999999999999999999999989999888776 79999999999988764


No 13 
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=94.36  E-value=0.095  Score=41.83  Aligned_cols=56  Identities=16%  Similarity=0.109  Sum_probs=49.1

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHH
Q psy11270         23 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSC   79 (98)
Q Consensus        23 ~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~A   79 (98)
                      ++|...|++++++.++.|.|.||-.+...-|.+.-|.+ +++.++|..+.+++++--
T Consensus       326 ~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~  381 (490)
T 3n71_A          326 HEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY-LQAYEEASHYARRMVDGY  381 (490)
T ss_dssp             HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHH
Confidence            46788899999999999999999999999998877776 799999999999987643


No 14 
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=94.16  E-value=0.11  Score=34.78  Aligned_cols=57  Identities=9%  Similarity=0.079  Sum_probs=48.9

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSC   79 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~A   79 (98)
                      .++|...|++|+++.++...+.+|.......|.+..++. +++.++|+...+++++..
T Consensus       101 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~  157 (283)
T 3edt_B          101 YKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQN-QGKAEEVEYYYRRALEIY  157 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence            568999999999999888888899888888888887775 799999999999887763


No 15 
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=93.69  E-value=0.27  Score=32.76  Aligned_cols=57  Identities=19%  Similarity=0.268  Sum_probs=48.3

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSC   79 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~A   79 (98)
                      .++|...|++++++.+....+.+|.......|.+..+.. +++.++|+...++++..+
T Consensus       143 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~  199 (283)
T 3edt_B          143 AEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLK-QGKYQDAETLYKEILTRA  199 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence            568999999999998888888899888888888877776 699999999998887753


No 16 
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=93.51  E-value=0.24  Score=34.94  Aligned_cols=59  Identities=3%  Similarity=0.028  Sum_probs=47.8

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHhc
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSCIGA   82 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~Ai~~   82 (98)
                      -++|...|++|+++.+ .++..+|....+..|.+..|++ +++.++|+...++|++-+...
T Consensus       171 ~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~nlg~~y~~-~~~y~~A~~~~~~al~~~~~~  229 (293)
T 3u3w_A          171 LKKGIDLFEQILKQLE-ALHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNKAIEISCRI  229 (293)
T ss_dssp             HHHHHHHHHHHHHHHH-HSSCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHH-hcccchhHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHc
Confidence            4689999999999885 4556667777788899988887 799999999999998766443


No 17 
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=93.26  E-value=0.098  Score=40.84  Aligned_cols=55  Identities=7%  Similarity=-0.042  Sum_probs=46.5

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         23 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        23 ~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      ++|...|++++++-++.|.|.||-.+.+.-|.+.-|.. +++.++|..+.++++.-
T Consensus       304 ~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~eA~~~~~~~L~i  358 (429)
T 3qwp_A          304 EQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEEALFYGTRTMEP  358 (429)
T ss_dssp             HHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Confidence            46778888888887788999999999999998776665 79999999999988654


No 18 
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=92.53  E-value=0.52  Score=31.96  Aligned_cols=57  Identities=23%  Similarity=0.287  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSC   79 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~A   79 (98)
                      .+.|...|++++++.+....+.+|.......+.+..+.. +++.++|+...+++++.+
T Consensus       169 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~  225 (311)
T 3nf1_A          169 YEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLK-QGKFKQAETLYKEILTRA  225 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence            568999999999998877788888888788888777765 799999999999988754


No 19 
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=92.36  E-value=0.53  Score=29.44  Aligned_cols=48  Identities=17%  Similarity=0.310  Sum_probs=36.1

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      -++|.+.|++|+++     .|.++   .+..|.++-+++ +++.++|++..++|+.-
T Consensus        24 ~~~A~~~y~~Al~~-----~p~~~---~~~~nlg~~~~~-~~~~~~A~~~~~~al~~   71 (127)
T 4gcn_A           24 FEKAHVHYDKAIEL-----DPSNI---TFYNNKAAVYFE-EKKFAECVQFCEKAVEV   71 (127)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----CCCCH---HHHHhHHHHHHH-hhhHHHHHHHHHHHHHh
Confidence            56899999999875     45554   355677777766 79999999988887653


No 20 
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=90.41  E-value=0.6  Score=31.63  Aligned_cols=59  Identities=8%  Similarity=0.046  Sum_probs=47.3

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHh
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSCIG   81 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~Ai~   81 (98)
                      .++|...|++++++.+...++.+|.......|.+..+.. .++.++|+...+++++....
T Consensus       127 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~a~~~~~~  185 (311)
T 3nf1_A          127 YKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQN-QGKYEEVEYYYQRALEIYQT  185 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence            567899999999998777777788777777777777665 79999999999888776443


No 21 
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=88.70  E-value=0.86  Score=28.93  Aligned_cols=56  Identities=20%  Similarity=0.268  Sum_probs=41.8

Q ss_pred             HHHHHHHHHHHHHHHHhcC---CCC-------CcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKM---QPT-------HPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L---~pt-------~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      -+.|...|++|+++.....   .|.       +|....+.+|.+.-++. +++.++|+...++++.-
T Consensus        27 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~~   92 (162)
T 3rkv_A           27 YKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSEVLKR   92 (162)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHhc
Confidence            4689999999998854321   233       56777888888877765 79999999988887543


No 22 
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=88.56  E-value=2  Score=25.64  Aligned_cols=55  Identities=16%  Similarity=0.062  Sum_probs=38.0

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhH-HHHHHHHhcChHHHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNF-SVFYYEIINSPARACHLAKQVQYSCI   80 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~-SVF~yEil~~~~~A~~iAk~Afd~Ai   80 (98)
                      .++|...|++|++++...   .++..++.+++. +..++ .+++.++|+...+++++-+-
T Consensus        25 ~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~~~   80 (164)
T 3ro3_A           25 FRDAVIAHEQRLLIAKEF---GDKAAERIAYSNLGNAYI-FLGEFETASEYYKKTLLLAR   80 (164)
T ss_dssp             HHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHh---CCchHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHH
Confidence            567889999999988642   234444444444 55444 47999999999888876643


No 23 
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=88.01  E-value=2.1  Score=26.68  Aligned_cols=47  Identities=17%  Similarity=0.106  Sum_probs=32.8

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      -++|.+.|++|+++     .|.+|   .+..|.+.-++. +++.++|+...++|+.
T Consensus        29 ~~~A~~~~~~al~~-----~p~~~---~~~~~~~~~~~~-~~~~~~A~~~~~~al~   75 (126)
T 4gco_A           29 YPTAMRHYNEAVKR-----DPENA---ILYSNRAACLTK-LMEFQRALDDCDTCIR   75 (126)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----CCCCH---HHHHHHhhHHHh-hccHHHHHHHHHHHHH
Confidence            46788899998864     34443   455666666665 7899999888777654


No 24 
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=87.92  E-value=2.9  Score=24.87  Aligned_cols=56  Identities=9%  Similarity=0.097  Sum_probs=38.9

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSCI   80 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~Ai   80 (98)
                      .++|...|++|++++...  +..+.......|.+..++. +++.++|+...+++++-+-
T Consensus        65 ~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~  120 (164)
T 3ro3_A           65 FETASEYYKKTLLLARQL--KDRAVEAQSCYSLGNTYTL-LQDYEKAIDYHLKHLAIAQ  120 (164)
T ss_dssp             HHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHh--CCcHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHH
Confidence            567889999999988642  2223334444555665554 7999999999999887653


No 25 
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=87.12  E-value=1.7  Score=30.46  Aligned_cols=55  Identities=4%  Similarity=0.041  Sum_probs=40.1

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcc-hhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPI-RLGLALNFSVFYYEIINSPARACHLAKQVQYSC   79 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~Pi-rLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~A   79 (98)
                      -++|...|++|+++++. .+ .++. ...+..|.+..++. +++.++|+...++|++-+
T Consensus       171 ~~~A~~~~~kal~~~~~-~~-~~~~~~~~~~~nlg~~y~~-~~~y~~Al~~~~kal~~~  226 (293)
T 2qfc_A          171 LKKGIDLFEQILKQLEA-LH-DNEEFDVKVRYNHAKALYL-DSRYEESLYQVNKAIEIS  226 (293)
T ss_dssp             HHHHHHHHHHHHHHHHH-SC-CCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHh-cC-ccccchHHHHHhHHHHHHH-HhhHHHHHHHHHHHHHHH
Confidence            45899999999988753 33 2332 22466677776665 799999999999988765


No 26 
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=86.45  E-value=2.1  Score=31.26  Aligned_cols=54  Identities=13%  Similarity=0.159  Sum_probs=39.7

Q ss_pred             HHHHHHHHHHHHHHHHhc-CCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSK-MQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQ   76 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~-L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Af   76 (98)
                      -++|.+.|++|+++.+.. ....||-.+...-|.+.-|+. +++.++|...-+++.
T Consensus        67 ~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~-~g~~~~A~~~~~ka~  121 (472)
T 4g1t_A           67 NEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYH-MGRLSDVQIYVDKVK  121 (472)
T ss_dssp             HHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHH-cCChHHHHHHHHHHH
Confidence            468999999999998653 334577666666778777665 789988877666554


No 27 
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=86.45  E-value=4.2  Score=25.77  Aligned_cols=55  Identities=7%  Similarity=0.082  Sum_probs=38.4

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhh-HHHHHHHHhcChHHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALN-FSVFYYEIINSPARACHLAKQVQYSC   79 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN-~SVF~yEil~~~~~A~~iAk~Afd~A   79 (98)
                      .+.|...|++|+++++ ..+ .+|...+.+++ .+.-+. -+++.++|....+++++-+
T Consensus        82 ~~~A~~~~~~al~~~~-~~~-~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~  137 (203)
T 3gw4_A           82 WDAARRCFLEERELLA-SLP-EDPLAASANAYEVATVAL-HFGDLAGARQEYEKSLVYA  137 (203)
T ss_dssp             HHHHHHHHHHHHHHHH-HSC-CCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH-HcC-ccHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHH
Confidence            4578999999999986 333 34544444444 454444 4899999999999887654


No 28 
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=85.51  E-value=3.9  Score=27.40  Aligned_cols=54  Identities=9%  Similarity=-0.019  Sum_probs=38.7

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSCI   80 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~Ai   80 (98)
                      .+.|...|++|+++     .|.+|..++.+++.-...|-..++.++|+...+++++-+-
T Consensus        21 ~~~A~~~~~~al~~-----~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~   74 (338)
T 3ro2_A           21 CRAGVSFFEAAVQV-----GTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLAR   74 (338)
T ss_dssp             HHHHHHHHHHHHHH-----CCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhh-----CcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhh
Confidence            56788889998875     5677766655555433344458999999999998877644


No 29 
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=85.30  E-value=3.8  Score=29.12  Aligned_cols=57  Identities=11%  Similarity=0.035  Sum_probs=41.9

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSC   79 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~A   79 (98)
                      .+.|...|+++++++...-.+.+|.......|.+..+++ .++.++|....+++++.+
T Consensus       109 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~  165 (373)
T 1hz4_A          109 LQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA-WARLDEAEASARSGIEVL  165 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHh
Confidence            457888999999988754444456665566667777666 699999998888877653


No 30 
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=85.07  E-value=3.5  Score=25.50  Aligned_cols=54  Identities=6%  Similarity=0.021  Sum_probs=35.6

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      -++|.+.|++|+++... .++.++.+-....|.+..+ +-+++.++|++.-++|+.
T Consensus        58 ~~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~lg~~~-~~~~~~~~A~~~~~kal~  111 (127)
T 4gcn_A           58 FAECVQFCEKAVEVGRE-TRADYKLIAKAMSRAGNAF-QKQNDLSLAVQWFHRSLS  111 (127)
T ss_dssp             HHHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCcc-cchhhHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHh
Confidence            46789999999988643 4444444333444555554 458999999987666654


No 31 
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=84.69  E-value=3.7  Score=23.44  Aligned_cols=47  Identities=15%  Similarity=0.188  Sum_probs=32.2

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      -++|...|++|+++     .|.+|   .+..|.+.-++. +++.++|+...++++.
T Consensus        20 ~~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~   66 (111)
T 2l6j_A           20 YREAVHCYDQLITA-----QPQNP---VGYSNKAMALIK-LGEYTQAIQMCQQGLR   66 (111)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence            46788899999864     34444   344566665554 7999998887777653


No 32 
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=84.57  E-value=3.8  Score=25.92  Aligned_cols=47  Identities=15%  Similarity=0.164  Sum_probs=30.2

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      -++|.+.|++++++     .|.+|   ....|.+.-+.. +++.++|+..-++|++
T Consensus       123 ~~~A~~~~~~~l~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~  169 (184)
T 3vtx_A          123 HDKAIEAYEKTISI-----KPGFI---RAYQSIGLAYEG-KGLRDEAVKYFKKALE  169 (184)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHh-----cchhh---hHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence            45677777777754     34443   344555555544 7999998887777654


No 33 
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=83.66  E-value=4.6  Score=23.28  Aligned_cols=55  Identities=7%  Similarity=0.072  Sum_probs=37.8

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      .+.|...|++++++... .++.++....+..+.+..++. +++.++|+..-+++++.
T Consensus        54 ~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~  108 (131)
T 1elr_A           54 YNKCRELCEKAIEVGRE-NREDYRQIAKAYARIGNSYFK-EEKYKDAIHFYNKSLAE  108 (131)
T ss_dssp             HHHHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhccc-cchhHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence            46788889999887642 344444445556666666665 79999998887777653


No 34 
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=82.17  E-value=5.7  Score=23.33  Aligned_cols=49  Identities=18%  Similarity=0.215  Sum_probs=30.9

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         23 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        23 ~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      ++|...|+++++     +.|.+|......++.+.-++. +++.++|+..-++++.
T Consensus        56 ~~A~~~~~~~~~-----~~p~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~  104 (129)
T 2xev_A           56 QLAEAQFRDLVS-----RYPTHDKAAGGLLKLGLSQYG-EGKNTEAQQTLQQVAT  104 (129)
T ss_dssp             HHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-----HCCCCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence            456666666654     346666555555566655554 7888888877766654


No 35 
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.01  E-value=4.4  Score=24.18  Aligned_cols=49  Identities=16%  Similarity=0.094  Sum_probs=28.8

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         23 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        23 ~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      +.|...|+++++     +.|.++....+..|.+..++. +++.++|+...++++.
T Consensus        45 ~~A~~~~~~a~~-----~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~   93 (148)
T 2dba_A           45 GGALAAYTQALG-----LDATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAIE   93 (148)
T ss_dssp             HHHHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-----HcccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHh
Confidence            345555555543     445555445555666655554 6777777777766654


No 36 
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=81.64  E-value=4.9  Score=28.84  Aligned_cols=55  Identities=18%  Similarity=0.211  Sum_probs=38.7

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhh-hhHHHHHHHHhcChHHHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLA-LNFSVFYYEIINSPARACHLAKQVQYSCI   80 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~-LN~SVF~yEil~~~~~A~~iAk~Afd~Ai   80 (98)
                      -++|...|++|++++...   .++..++.+ .|.+..+. -+++.++|+...++|++-+-
T Consensus       200 ~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~lg~~y~-~~g~~~~A~~~~~~al~~~~  255 (383)
T 3ulq_A          200 YEDAISHFQKAYSMAEAE---KQPQLMGRTLYNIGLCKN-SQSQYEDAIPYFKRAIAVFE  255 (383)
T ss_dssp             HHHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHc---CChHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHH
Confidence            468999999999998643   234444444 44555554 48999999999988887543


No 37 
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=80.89  E-value=6.8  Score=23.33  Aligned_cols=48  Identities=10%  Similarity=0.245  Sum_probs=33.7

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      -++|...|++|+++     .|.+   ..+..|.++-++. +++.++|+...++++..
T Consensus        43 ~~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~   90 (117)
T 3k9i_A           43 YRKAEAVLANGVKQ-----FPNH---QALRVFYAMVLYN-LGRYEQGVELLLKIIAE   90 (117)
T ss_dssp             HHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----CCCc---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence            45677777777754     4444   3455666666665 79999999988888765


No 38 
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=80.82  E-value=5.2  Score=21.95  Aligned_cols=48  Identities=17%  Similarity=0.277  Sum_probs=32.8

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      .++|...|++|+++     .|.+|   ....|.+..++. +++.++|+...++++..
T Consensus        25 ~~~A~~~~~~a~~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~   72 (91)
T 1na3_A           25 YDEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALEL   72 (91)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHhc
Confidence            45788888888864     33443   344566665554 79999999888877653


No 39 
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=80.75  E-value=7.4  Score=27.65  Aligned_cols=55  Identities=11%  Similarity=-0.028  Sum_probs=38.4

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHh
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSCIG   81 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~Ai~   81 (98)
                      .+.|...|++|+++     .|.+|..++.+++.-...|..+++.++|+...++++..+-.
T Consensus        64 ~~~A~~~~~~al~~-----~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~  118 (411)
T 4a1s_A           64 CRAGVAFFQAAIQA-----GTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKS  118 (411)
T ss_dssp             HHHHHHHHHHHHHH-----CCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----cccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence            45677888888764     56777766655554333444589999999999998876533


No 40 
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=80.74  E-value=6.6  Score=24.79  Aligned_cols=56  Identities=7%  Similarity=-0.005  Sum_probs=38.6

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSCI   80 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~Ai   80 (98)
                      .++|...+++|+++++.   ..+|...+.+++.-...|.-.++.++|+...++|++-+-
T Consensus       123 ~~~A~~~~~~al~~~~~---~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~  178 (203)
T 3gw4_A          123 LAGARQEYEKSLVYAQQ---ADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA  178 (203)
T ss_dssp             HHHHHHHHHHHHHHHHH---TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHh---ccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence            56788999999988753   234444555555444444458999999999888877643


No 41 
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=80.19  E-value=5.9  Score=22.16  Aligned_cols=47  Identities=15%  Similarity=0.150  Sum_probs=32.2

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .++|...|++++++     .|.+   .....+.+..++. +++.++|+...++++.
T Consensus        22 ~~~A~~~~~~a~~~-----~~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~   68 (112)
T 2kck_A           22 YTESIDLFEKAIQL-----DPEE---SKYWLMKGKALYN-LERYEEAVDCYNYVIN   68 (112)
T ss_dssp             HHHHHHHHHHHHHH-----CCCC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----CcCC---HHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence            46788888888764     2333   3445666666665 6899999888777664


No 42 
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=80.08  E-value=6.9  Score=22.94  Aligned_cols=49  Identities=10%  Similarity=0.062  Sum_probs=34.2

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSC   79 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~A   79 (98)
                      .+.|...|++|+++     .|.+|.   ...+.+.-+. -+++.++|+..-++++.-+
T Consensus        23 ~~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~-~~g~~~~A~~~~~~al~l~   71 (100)
T 3ma5_A           23 ASRALALFEELVET-----DPDYVG---TYYHLGKLYE-RLDRTDDAIDTYAQGIEVA   71 (100)
T ss_dssp             HHHHHHHHHHHHHH-----STTCTH---HHHHHHHHHH-HTTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHH-HcCCHHHHHHHHHHHHhhh
Confidence            46788888888864     344443   4455565554 4899999999988887654


No 43 
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=79.31  E-value=6.8  Score=28.18  Aligned_cols=54  Identities=11%  Similarity=0.128  Sum_probs=37.2

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhh-hHHHHHHHHhcChHHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLAL-NFSVFYYEIINSPARACHLAKQVQYSC   79 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~L-N~SVF~yEil~~~~~A~~iAk~Afd~A   79 (98)
                      -++|.+.|++|+++++. .  .++..++.++ |.+.-+. -+++.++|+...++|++-+
T Consensus       198 ~~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~lg~~y~-~~~~~~~A~~~~~~al~~~  252 (378)
T 3q15_A          198 YDKALPHLEAALELAMD-I--QNDRFIAISLLNIANSYD-RSGDDQMAVEHFQKAAKVS  252 (378)
T ss_dssp             HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH-c--CCHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHH
Confidence            46789999999998864 2  2333445444 4455444 4799999999888887743


No 44 
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=78.22  E-value=8.6  Score=26.84  Aligned_cols=53  Identities=9%  Similarity=0.107  Sum_probs=37.2

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhh-HHHHHHHHhcChHHHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALN-FSVFYYEIINSPARACHLAKQVQYSCI   80 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN-~SVF~yEil~~~~~A~~iAk~Afd~Ai   80 (98)
                      .+.|...|++++++     .|.+|..++.+++ .+..++ ..++.++|+...+++++-+-
T Consensus        25 ~~~A~~~~~~al~~-----~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~   78 (406)
T 3sf4_A           25 CRAGVSFFEAAVQV-----GTEDLKTLSAIYSQLGNAYF-YLHDYAKALEYHHHDLTLAR   78 (406)
T ss_dssp             HHHHHHHHHHHHHH-----CCSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc-----CcccHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHH
Confidence            46788888888875     5667665554444 455444 47999999999888876643


No 45 
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=78.19  E-value=8.1  Score=22.64  Aligned_cols=51  Identities=10%  Similarity=0.103  Sum_probs=34.9

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      -+.|...|+++++     ..|.+|......++.+..++. .++.++|+..-+++++.
T Consensus        18 ~~~A~~~~~~~~~-----~~p~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~~~~~   68 (129)
T 2xev_A           18 YDDASQLFLSFLE-----LYPNGVYTPNALYWLGESYYA-TRNFQLAEAQFRDLVSR   68 (129)
T ss_dssp             HHHHHHHHHHHHH-----HCSSSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-----HCCCCcccHHHHHHHHHHHHH-hccHHHHHHHHHHHHHH
Confidence            4567777777764     356788655555666666665 79999998887776653


No 46 
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=77.43  E-value=9.9  Score=23.80  Aligned_cols=47  Identities=17%  Similarity=0.156  Sum_probs=28.7

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .++|...|++|+++     .|.+   ..+..|.+..++. +++.++|+...++++.
T Consensus        27 ~~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~-~g~~~~A~~~~~~al~   73 (164)
T 3sz7_A           27 YSKAIDLYTQALSI-----APAN---PIYLSNRAAAYSA-SGQHEKAAEDAELATV   73 (164)
T ss_dssp             HHHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----CCcC---HHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence            45677777777764     2333   3344555555554 6788888777776644


No 47 
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=77.16  E-value=10  Score=23.32  Aligned_cols=47  Identities=2%  Similarity=-0.043  Sum_probs=31.9

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .++|...|++|+++     .|.++   ....|.+.-+.. +++.++|++.-++++.
T Consensus        63 ~~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~~~~~~A~~~~~~al~  109 (126)
T 4gco_A           63 FQRALDDCDTCIRL-----DSKFI---KGYIRKAACLVA-MREWSKAQRAYEDALQ  109 (126)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----hhhhh---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence            45788888888764     44443   344555655554 7999999887777654


No 48 
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=77.11  E-value=10  Score=23.89  Aligned_cols=47  Identities=19%  Similarity=0.342  Sum_probs=31.0

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .++|.+.|++|+++     .|.||   ....+.+..+.+ +++.++|+...+++..
T Consensus        21 ~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~~~~~~a~~~~~~~~~   67 (184)
T 3vtx_A           21 FDGAIRAYKKVLKA-----DPNNV---ETLLKLGKTYMD-IGLPNDAIESLKKFVV   67 (184)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence            56789999999864     45554   333444444444 6888888887777644


No 49 
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=76.61  E-value=9.3  Score=26.66  Aligned_cols=58  Identities=10%  Similarity=0.025  Sum_probs=38.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHH
Q psy11270         20 AVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSCI   80 (98)
Q Consensus        20 ~~~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~Ai   80 (98)
                      ...++|...|++|++++...  +.+|.......|.+..++. +++.++|+...++++.-.-
T Consensus       161 ~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~  218 (406)
T 3sf4_A          161 DALQAAVDFYEENLSLVTAL--GDRAAQGRAFGNLGNTHYL-LGNFRDAVIAHEQRLLIAK  218 (406)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHH-HTBHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHHH
Confidence            34678888888888887542  2334444444555555554 7899999988888776543


No 50 
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=76.05  E-value=9.9  Score=22.52  Aligned_cols=47  Identities=17%  Similarity=0.041  Sum_probs=27.3

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      -+.|...|++|+++     .|.+|   .+..|.+.-++. +++.++|+...++++.
T Consensus        20 ~~~A~~~~~~al~~-----~p~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~   66 (126)
T 3upv_A           20 WPNAVKAYTEMIKR-----APEDA---RGYSNRAAALAK-LMSFPEAIADCNKAIE   66 (126)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence            45677777777654     33333   344444544443 6777777776666643


No 51 
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=75.99  E-value=9.3  Score=27.44  Aligned_cols=54  Identities=9%  Similarity=0.092  Sum_probs=39.2

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSC   79 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~A   79 (98)
                      .++|...|++|+++++..   .+|.......|.+..++. +++.++|+...++|+.-+
T Consensus       238 ~~~A~~~~~~al~~~~~~---~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~  291 (378)
T 3q15_A          238 DQMAVEHFQKAAKVSREK---VPDLLPKVLFGLSWTLCK-AGQTQKAFQFIEEGLDHI  291 (378)
T ss_dssp             HHHHHHHHHHHHHHHHHH---CGGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHhh---CChhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHH
Confidence            468999999999988654   344444445555666554 799999999988887653


No 52 
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=75.95  E-value=11  Score=26.08  Aligned_cols=53  Identities=11%  Similarity=0.019  Sum_probs=35.0

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHH-HHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARA-CHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A-~~iAk~Afd   77 (98)
                      -++|...|++|++++..   ..++..++.+++.--..|.-+++.++| ...-++|+.
T Consensus       212 y~~Al~~~~kal~~~~~---~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~  265 (293)
T 2qfc_A          212 YEESLYQVNKAIEISCR---INSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASF  265 (293)
T ss_dssp             HHHHHHHHHHHHHHHHH---TTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHh---cCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHH
Confidence            46899999999998853   234445565555444455568999999 454555543


No 53 
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=75.28  E-value=9.6  Score=22.02  Aligned_cols=48  Identities=10%  Similarity=0.079  Sum_probs=29.6

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      .++|...|++++++     .|.+   .....+.+..++. +++.++|+...++++..
T Consensus        66 ~~~A~~~~~~a~~~-----~~~~---~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~  113 (133)
T 2lni_A           66 FQLALKDCEECIQL-----EPTF---IKGYTRKAAALEA-MKDYTKAMDVYQKALDL  113 (133)
T ss_dssp             HHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----CCCc---hHHHHHHHHHHHH-HhhHHHHHHHHHHHHHh
Confidence            45677777777653     2333   3344555555443 78888888887776653


No 54 
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=75.16  E-value=12  Score=26.72  Aligned_cols=58  Identities=14%  Similarity=0.006  Sum_probs=39.7

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHh
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSCIG   81 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~Ai~   81 (98)
                      .+.|...|++|+++... .+ ..+.+.+.+++.--..|.-+++.++|+..-++|++-+-.
T Consensus       159 ~~~A~~~~~~al~~~~~-~~-~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~  216 (383)
T 3ulq_A          159 TYFSMDYARQAYEIYKE-HE-AYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEA  216 (383)
T ss_dssp             HHHHHHHHHHHHHHHHT-CS-TTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHh-Cc-cchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence            46789999999999864 22 224455555554334444589999999998888766443


No 55 
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=75.13  E-value=11  Score=26.42  Aligned_cols=53  Identities=9%  Similarity=-0.014  Sum_probs=37.0

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         23 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        23 ~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      ++|.++|++|+++... +  -+|...+.+++---..|.-++++++|+..-++|++-
T Consensus        54 ~~A~~~~~~al~~~~~-~--~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l  106 (292)
T 1qqe_A           54 NLAGDSFLKAADYQKK-A--GNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQI  106 (292)
T ss_dssp             HHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH-h--CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence            5788899999988753 2  245555555555444555689999999888887654


No 56 
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=74.54  E-value=9.4  Score=21.56  Aligned_cols=49  Identities=12%  Similarity=0.091  Sum_probs=32.4

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      .+.|...|++++++     .|.+|..  ...+.+..++. +++.++|+..-++++..
T Consensus        16 ~~~A~~~~~~al~~-----~p~~~~~--~~~~lg~~~~~-~~~~~~A~~~~~~al~~   64 (99)
T 2kc7_A           16 IENALQALEEFLQT-----EPVGKDE--AYYLMGNAYRK-LGDWQKALNNYQSAIEL   64 (99)
T ss_dssp             HHHHHHHHHHHHHH-----CSSTHHH--HHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH-----CCCcHHH--HHHHHHHHHHH-cCCHHHHHHHHHHHHhc
Confidence            45688888888763     4445421  45566666655 79999998887777643


No 57 
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=74.30  E-value=4.9  Score=30.54  Aligned_cols=53  Identities=9%  Similarity=0.006  Sum_probs=39.2

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHhcc
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSCIGAS   83 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~Ai~~~   83 (98)
                      .++|...|++|+.        .+| ...+-+.|.-|..+..++.++|.+.+.++|+.|+..+
T Consensus        62 ~~~a~~~~~ral~--------~~p-~~~lw~~~~~~~~~~~~~~~~a~~~~~~~~~~al~~~  114 (530)
T 2ooe_A           62 YDKVEKLFQRCLM--------KVL-HIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKI  114 (530)
T ss_dssp             HHHHHHHHHHHTT--------TCC-CHHHHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHh--------cCC-ChHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHC
Confidence            4456666666653        224 3557788888888889999999999999999998753


No 58 
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=74.27  E-value=13  Score=23.42  Aligned_cols=47  Identities=11%  Similarity=-0.031  Sum_probs=29.1

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      -+.|..+|++|+.+     .|.+|   ...+|.++.+.. +++.++|+..-++++.
T Consensus        71 ~~~A~~~~~~al~l-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~  117 (148)
T 2vgx_A           71 YDLAIHSYSYGAVM-----DIXEP---RFPFHAAECLLQ-XGELAEAESGLFLAQE  117 (148)
T ss_dssp             HHHHHHHHHHHHHH-----STTCT---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc-----CCCCc---hHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence            35677777777653     45554   334555655554 6888888776666554


No 59 
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=74.24  E-value=11  Score=22.26  Aligned_cols=47  Identities=15%  Similarity=0.212  Sum_probs=23.7

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .+.|...|++++++     .|.+|   ....|.+..++. +++.++|+...++++.
T Consensus        25 ~~~A~~~~~~al~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~al~   71 (137)
T 3q49_B           25 YPEAAACYGRAITR-----NPLVA---VYYTNRALCYLK-MQQPEQALADCRRALE   71 (137)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhh-----CcCcH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence            34566666666553     23332   233444444433 5666666666555543


No 60 
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=73.99  E-value=12  Score=24.86  Aligned_cols=53  Identities=17%  Similarity=-0.009  Sum_probs=26.3

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         23 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        23 ~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      +.|...|+++++++...   .+|...+.+++.-...|.-.++.++|+...+++++.
T Consensus       200 ~~A~~~~~~a~~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~  252 (338)
T 3ro2_A          200 RDAVIAHEQRLLIAKEF---GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLL  252 (338)
T ss_dssp             HHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence            45666666666665431   122233333333233333456677766666666544


No 61 
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=73.86  E-value=14  Score=23.11  Aligned_cols=48  Identities=8%  Similarity=-0.024  Sum_probs=32.7

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      .+.|...|++|+++     .|.+   .....|.+.-++. +++.++|+..-++++.-
T Consensus        61 ~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~  108 (164)
T 3sz7_A           61 HEKAAEDAELATVV-----DPKY---SKAWSRLGLARFD-MADYKGAKEAYEKGIEA  108 (164)
T ss_dssp             HHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence            45788888888765     3444   3445566666555 79999998888777654


No 62 
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=73.83  E-value=12  Score=23.64  Aligned_cols=48  Identities=19%  Similarity=0.115  Sum_probs=24.4

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         23 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        23 ~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      +.|...|+++++      .|.+|....+..+.+..+.. .++.++|+...++++.
T Consensus        94 ~~A~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~~~~  141 (225)
T 2vq2_A           94 AESMAYFDKALA------DPTYPTPYIANLNKGICSAK-QGQFGLAEAYLKRSLA  141 (225)
T ss_dssp             HHHHHHHHHHHT------STTCSCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHc------CcCCcchHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence            344455555443      23444444444555544443 5666666666655543


No 63 
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=73.57  E-value=6.3  Score=23.48  Aligned_cols=50  Identities=8%  Similarity=-0.030  Sum_probs=36.7

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         23 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        23 ~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      ++|...|++|++     +.+.+|-......|.+..++. +++.++|+...++++..
T Consensus         7 ~~A~~~~~~al~-----~~~~~p~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~   56 (117)
T 3k9i_A            7 AQAVPYYEKAIA-----SGLQGKDLAECYLGLGSTFRT-LGEYRKAEAVLANGVKQ   56 (117)
T ss_dssp             CCCHHHHHHHHS-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-----cCCCCccHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence            357788888875     334467777777788777775 79999999988887643


No 64 
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=71.84  E-value=17  Score=23.47  Aligned_cols=50  Identities=20%  Similarity=0.263  Sum_probs=32.0

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcc-------------hhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPI-------------RLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~Pi-------------rLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      -+.|...|++|+++     .|.+|-             +..+..|.+..++. +++.++|+...++++.
T Consensus        54 ~~~A~~~~~~al~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~al~  116 (198)
T 2fbn_A           54 INEAIVKYKEALDF-----FIHTEEWDDQILLDKKKNIEISCNLNLATCYNK-NKDYPKAIDHASKVLK  116 (198)
T ss_dssp             HHHHHHHHHHHHHT-----TTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH-----HhcccccchhhHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence            34677777777653     344441             12455666666654 7899999888887765


No 65 
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=71.84  E-value=13  Score=21.97  Aligned_cols=49  Identities=8%  Similarity=0.030  Sum_probs=33.0

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSC   79 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~A   79 (98)
                      .++|...|++|+++     .|.+|   ...++.+.-+.. +++.++|+..-++++.-.
T Consensus        54 ~~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~  102 (126)
T 3upv_A           54 FPEAIADCNKAIEK-----DPNFV---RAYIRKATAQIA-VKEYASALETLDAARTKD  102 (126)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-HhCHHHHHHHHHHHHHhC
Confidence            45788888888764     34443   344555555554 799999988888876643


No 66 
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=71.47  E-value=14  Score=23.94  Aligned_cols=54  Identities=7%  Similarity=0.054  Sum_probs=37.2

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .++|...|++++++... .++.+|....+..+.+..+. -+++.++|+..-++++.
T Consensus        54 ~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~  107 (258)
T 3uq3_A           54 YETAISTLNDAVEQGRE-MRADYKVISKSFARIGNAYH-KLGDLKKTIEYYQKSLT  107 (258)
T ss_dssp             HHHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCcc-cccchHHHHHHHHHHHHHHH-HcccHHHHHHHHHHHHh
Confidence            56788899999887643 34444443444555555554 47999999998888776


No 67 
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=71.12  E-value=21  Score=25.27  Aligned_cols=58  Identities=12%  Similarity=0.110  Sum_probs=39.0

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHh
Q psy11270         21 VVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSCIG   81 (98)
Q Consensus        21 ~~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~Ai~   81 (98)
                      ..++|...|++|+++....  +.+|.......|.+..++ -+++.++|+...+++++-.-.
T Consensus       198 ~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~  255 (411)
T 4a1s_A          198 ALTRAVEFYQENLKLMRDL--GDRGAQGRACGNLGNTYY-LLGDFQAAIEHHQERLRIARE  255 (411)
T ss_dssp             HHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHh
Confidence            3678888999998887543  223444444445555544 479999999988888765433


No 68 
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=71.10  E-value=20  Score=24.46  Aligned_cols=54  Identities=15%  Similarity=0.195  Sum_probs=35.3

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhh-----hhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLG-----LALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLg-----L~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      -+.|..+|++|+++.-. .|...++.+.     +..|-+.=+.. +++.++|+.-..+|+.
T Consensus        27 ~eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~   85 (159)
T 2hr2_A           27 YDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALH   85 (159)
T ss_dssp             HHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence            56799999999988643 2222222322     55666655444 7999999888777655


No 69 
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=71.01  E-value=5.1  Score=29.94  Aligned_cols=55  Identities=15%  Similarity=0.138  Sum_probs=39.6

Q ss_pred             HHHHHHHHHHHHHHHHhc--------CCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSK--------MQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~--------L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      -+.|...|++|+++....        ....+|...-+.+|.+.-++. +++.++|+...++|+.
T Consensus       239 ~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~  301 (370)
T 1ihg_A          239 WEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCLEALE  301 (370)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHH
Confidence            357888899998865431        011456777788888887775 7999999988888754


No 70 
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=70.91  E-value=8.8  Score=27.90  Aligned_cols=50  Identities=18%  Similarity=0.187  Sum_probs=30.8

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQ   76 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Af   76 (98)
                      .++|.+.|++|+++     .|.++..-.+.+++..+...-+++.++|+..-++|+
T Consensus       350 ~~~A~~~~~kaL~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal  399 (472)
T 4g1t_A          350 YEEAEYYFQKEFSK-----ELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGV  399 (472)
T ss_dssp             HHHHHHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc-----CCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence            34666777777642     344444445566676666656788888877655554


No 71 
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=70.56  E-value=4.1  Score=28.05  Aligned_cols=24  Identities=13%  Similarity=0.141  Sum_probs=18.7

Q ss_pred             ccCCcchhHHHHHHHHHHHHHHHH
Q psy11270         12 VATGDTRNAVVEDSQKAYQEAFDI   35 (98)
Q Consensus        12 ~~~~~~~~~~~~~a~~aY~~A~~~   35 (98)
                      +..+.+|...-+.|...|++|+++
T Consensus         8 ~~~~~~r~~~feeA~~~~~~Ai~l   31 (158)
T 1zu2_A            8 TETEFDRILLFEQIRQDAENTYKS   31 (158)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccHHHHHhHHHHHHHHHHHHHHH
Confidence            345667888888999999999864


No 72 
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=70.19  E-value=19  Score=24.93  Aligned_cols=55  Identities=13%  Similarity=0.028  Sum_probs=36.7

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhc-ChHHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIIN-SPARACHLAKQVQYSC   79 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~-~~~~A~~iAk~Afd~A   79 (98)
                      -++|...|++|++++...   .++..++.+++.--..|.-++ +.++|++.-++|+.-+
T Consensus       212 y~~A~~~~~~al~~~~~~---~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~  267 (293)
T 3u3w_A          212 YEESLYQVNKAIEISCRI---NSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF  267 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHT---TBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHc---CcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence            468999999999998642   234445555554334444577 4599998888887654


No 73 
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=69.92  E-value=15  Score=22.08  Aligned_cols=46  Identities=7%  Similarity=-0.156  Sum_probs=23.0

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         23 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        23 ~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      +.|...|++++++     .|.+|   ....+.+..+.. +++.++|+...++++.
T Consensus        64 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~  109 (166)
T 1a17_A           64 GYALGDATRAIEL-----DKKYI---KGYYRRAASNMA-LGKFRAALRDYETVVK  109 (166)
T ss_dssp             HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence            4555556555543     23332   233444444333 5667766666665543


No 74 
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=69.73  E-value=13  Score=21.18  Aligned_cols=50  Identities=18%  Similarity=0.261  Sum_probs=34.4

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSCI   80 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~Ai   80 (98)
                      .+.|...|+++++.     .|.+|   .+..+.+..++. +++.++|+...+++++..-
T Consensus        20 ~~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~   69 (131)
T 1elr_A           20 FDTALKHYDKAKEL-----DPTNM---TYITNQAAVYFE-KGDYNKCRELCEKAIEVGR   69 (131)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc-----CCccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHhhcc
Confidence            56788888888764     23333   344556665554 7999999999888876543


No 75 
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=69.26  E-value=18  Score=22.66  Aligned_cols=47  Identities=11%  Similarity=0.119  Sum_probs=28.2

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      -++|.+.|++|+++     .|.||.   ...|.+..+. -+++.++|+..-+++++
T Consensus        47 ~~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~-~~~~~~~A~~~~~~al~   93 (150)
T 4ga2_A           47 YDLAKKYICTYINV-----QERDPK---AHRFLGLLYE-LEENTDKAVECYRRSVE   93 (150)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHH-HcCchHHHHHHHHHHHH
Confidence            35677777777653     455542   3344444444 36888888877666654


No 76 
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=69.25  E-value=23  Score=23.78  Aligned_cols=56  Identities=14%  Similarity=0.035  Sum_probs=36.5

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCC-cchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTH-PIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~-PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      .+.|...|++++++....-.+.. |-...+..+.+..+. -+++.++|+..-++++..
T Consensus       209 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~  265 (330)
T 3hym_B          209 WKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCR-KLKKYAEALDYHRQALVL  265 (330)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhh
Confidence            46788899999888754333222 333344555565554 479999998888887653


No 77 
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=68.30  E-value=21  Score=22.96  Aligned_cols=48  Identities=6%  Similarity=-0.055  Sum_probs=30.8

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      .+.|...|++|+++     .|.+   ....++.+..++. +++.++|+..-++++.-
T Consensus       104 ~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~  151 (198)
T 2fbn_A          104 YPKAIDHASKVLKI-----DKNN---VKALYKLGVANMY-FGFLEEAKENLYKAASL  151 (198)
T ss_dssp             HHHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----Cccc---HHHHHHHHHHHHH-cccHHHHHHHHHHHHHH
Confidence            34666777777654     3333   3445566666554 79999998888777543


No 78 
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=68.03  E-value=14  Score=20.67  Aligned_cols=15  Identities=13%  Similarity=-0.048  Sum_probs=8.2

Q ss_pred             hcChHHHHHHHHHHH
Q psy11270         62 INSPARACHLAKQVQ   76 (98)
Q Consensus        62 l~~~~~A~~iAk~Af   76 (98)
                      +++.++|+...+++.
T Consensus        85 ~~~~~~A~~~~~~~~   99 (118)
T 1elw_A           85 LNRFEEAKRTYEEGL   99 (118)
T ss_dssp             TTCHHHHHHHHHHHH
T ss_pred             HhhHHHHHHHHHHHH
Confidence            566666655554443


No 79 
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=68.02  E-value=19  Score=23.84  Aligned_cols=47  Identities=19%  Similarity=0.203  Sum_probs=29.5

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .++|...|++|+++     .|.+|   ...+|.+..+.. +++.++|+..-++|+.
T Consensus       100 ~~~A~~~~~~al~~-----~P~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~  146 (217)
T 2pl2_A          100 LEQALSVLKDAERV-----NPRYA---PLHLQRGLVYAL-LGERDKAEASLKQALA  146 (217)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-cCChHHHHHHHHHHHh
Confidence            45677777777653     44444   344555555554 6888888777777654


No 80 
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=67.89  E-value=15  Score=23.84  Aligned_cols=47  Identities=13%  Similarity=0.152  Sum_probs=28.8

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      -+.|..+|++|+++     .|.+|.   ...|.++-+.. +++.++|+..-++++.
T Consensus        86 ~~~Ai~~~~~al~l-----~P~~~~---~~~~lg~~~~~-lg~~~eA~~~~~~al~  132 (151)
T 3gyz_A           86 FQQAADLYAVAFAL-----GKNDYT---PVFHTGQCQLR-LKAPLKAKECFELVIQ  132 (151)
T ss_dssp             HHHHHHHHHHHHHH-----SSSCCH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhh-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence            45677777777653     455553   34555555544 7888887766665544


No 81 
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=67.84  E-value=14  Score=24.10  Aligned_cols=34  Identities=18%  Similarity=0.183  Sum_probs=17.7

Q ss_pred             CCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         43 THPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        43 t~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .+|....+..+.+..++. .++.++|+...++++.
T Consensus       136 ~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~  169 (252)
T 2ho1_A          136 LYPERSRVFENLGLVSLQ-MKKPAQAKEYFEKSLR  169 (252)
T ss_dssp             TCTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             cCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence            344444444444444443 5666666666665543


No 82 
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=67.61  E-value=16  Score=21.31  Aligned_cols=48  Identities=13%  Similarity=-0.031  Sum_probs=32.0

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      .+.|...|++|+++     .|.++   ....+.+..+.. +++.++|+..-++++..
T Consensus        35 ~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~   82 (115)
T 2kat_A           35 FDAALPHLRAALDF-----DPTYS---VAWKWLGKTLQG-QGDRAGARQAWESGLAA   82 (115)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence            45688888888764     34443   334555555554 79999999888887654


No 83 
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=67.46  E-value=21  Score=22.73  Aligned_cols=47  Identities=13%  Similarity=0.181  Sum_probs=31.0

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .++|...|++|+++     .|.+   .....|.+.-++. +++.++|+..-+++++
T Consensus        53 ~~~A~~~~~~al~~-----~~~~---~~~~~~lg~~~~~-~~~~~~A~~~~~~al~   99 (213)
T 1hh8_A           53 MTEAEKAFTRSINR-----DKHL---AVAYFQRGMLYYQ-TEKYDLAIKDLKEALI   99 (213)
T ss_dssp             HHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----Cccc---hHHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence            45677788888764     2333   3445566666555 7888888887777665


No 84 
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=67.28  E-value=20  Score=22.38  Aligned_cols=27  Identities=15%  Similarity=0.004  Sum_probs=14.1

Q ss_pred             hhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         50 LALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        50 L~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      ...+.+..++. +++.++|+..-++++.
T Consensus       117 ~~~~la~~~~~-~g~~~~A~~~~~~al~  143 (177)
T 2e2e_A          117 ALMLLASDAFM-QANYAQAIELWQKVMD  143 (177)
T ss_dssp             HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH-cccHHHHHHHHHHHHh
Confidence            33444444443 5666666666555543


No 85 
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=66.65  E-value=23  Score=23.30  Aligned_cols=47  Identities=9%  Similarity=0.077  Sum_probs=32.6

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .++|...|++|+++     .|.+   ....+|.+..+.. +++.++|+..-++++.
T Consensus        70 ~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~-~g~~~~A~~~~~~al~  116 (208)
T 3urz_A           70 YDKAYLFYKELLQK-----APNN---VDCLEACAEMQVC-RGQEKDALRMYEKILQ  116 (208)
T ss_dssp             HHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH-----CCCC---HHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence            46788888888764     3444   3555666666665 6899998888777654


No 86 
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=66.53  E-value=16  Score=28.09  Aligned_cols=46  Identities=22%  Similarity=0.166  Sum_probs=25.0

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQ   76 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Af   76 (98)
                      -++|.+.|++|+++        +|-......|.+.-+++ +++.++|+...++|+
T Consensus        22 ~~~A~~~~~~Al~~--------~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al   67 (477)
T 1wao_1           22 YENAIKFYSQAIEL--------NPSNAIYYGNRSLAYLR-TECYGYALGDATRAI   67 (477)
T ss_dssp             HHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHH-hcCHHHHHHHHHHHH
Confidence            45677777777664        22223334444444443 566666666655553


No 87 
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=66.35  E-value=16  Score=20.76  Aligned_cols=46  Identities=13%  Similarity=0.083  Sum_probs=22.5

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         23 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        23 ~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      +.|...|++++++     .|.+|   ....+.+..++. +++.++|+...++++.
T Consensus        63 ~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~-~~~~~~A~~~~~~~~~  108 (131)
T 2vyi_A           63 AGAVQDCERAICI-----DPAYS---KAYGRMGLALSS-LNKHVEAVAYYKKALE  108 (131)
T ss_dssp             HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhc-----CccCH---HHHHHHHHHHHH-hCCHHHHHHHHHHHHh
Confidence            3455555555542     23332   223334443333 5677777666665554


No 88 
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=66.13  E-value=11  Score=21.77  Aligned_cols=46  Identities=20%  Similarity=0.161  Sum_probs=29.2

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         23 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        23 ~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      +.|...|+++++     +.|.+   ..+..+.+..+.. .++.++|+...++++.
T Consensus        33 ~~A~~~~~~al~-----~~~~~---~~~~~~la~~~~~-~~~~~~A~~~~~~a~~   78 (133)
T 2lni_A           33 PQAMKHYTEAIK-----RNPKD---AKLYSNRAACYTK-LLEFQLALKDCEECIQ   78 (133)
T ss_dssp             HHHHHHHHHHHT-----TCTTC---HHHHHHHHHHHTT-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-----cCCCc---HHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence            456777777764     33433   3344555555544 7899999888887765


No 89 
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=66.02  E-value=16  Score=20.73  Aligned_cols=48  Identities=17%  Similarity=0.194  Sum_probs=31.4

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      .+.|...|++++++     .|.+   .....+.+..++. .++.++|+...++++..
T Consensus        28 ~~~A~~~~~~~~~~-----~~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~   75 (131)
T 2vyi_A           28 FEAAVHFYGKAIEL-----NPAN---AVYFCNRAAAYSK-LGNYAGAVQDCERAICI   75 (131)
T ss_dssp             HHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHc-----CCCC---HHHHHHHHHHHHH-hhchHHHHHHHHHHHhc
Confidence            45677788888764     2333   2334455555544 79999999988887653


No 90 
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=65.81  E-value=19  Score=21.62  Aligned_cols=48  Identities=21%  Similarity=0.151  Sum_probs=31.9

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      .+.|...|++++++     .|.+   ..+..+.+..+.. +++.++|+...++++..
T Consensus        29 ~~~A~~~~~~al~~-----~~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~   76 (166)
T 1a17_A           29 YENAIKFYSQAIEL-----NPSN---AIYYGNRSLAYLR-TECYGYALGDATRAIEL   76 (166)
T ss_dssp             HHHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----CCCC---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence            45678888888764     2333   3445555655554 79999999888887653


No 91 
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=65.67  E-value=20  Score=21.87  Aligned_cols=48  Identities=8%  Similarity=0.009  Sum_probs=30.5

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      .+.|...|++|+.+     .|.+|.   ..+|.+..+.. +++.++|+..-++++..
T Consensus        68 ~~~A~~~~~~al~~-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~  115 (142)
T 2xcb_A           68 YEQALQSYSYGALM-----DINEPR---FPFHAAECHLQ-LGDLDGAESGFYSARAL  115 (142)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence            45677777777653     455553   33555555444 78888888877776554


No 92 
>3ub0_A Non-structural protein 6, NSP6,; feline coronavirus, primer-independen polymerase, replication; 2.60A {Feline infectious peritonitis virus}
Probab=65.45  E-value=6.3  Score=28.64  Aligned_cols=37  Identities=22%  Similarity=0.384  Sum_probs=26.6

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      -+.|..+|++|..-   .-+   |              .+++...+|+-|||..||.
T Consensus        19 YE~A~~~Ye~a~~n---g~~---p--------------Q~~Kql~KA~NIAKse~dr   55 (199)
T 3ub0_A           19 YEKARADLEEAKKN---DVS---P--------------QLLKQLTKACNIAKSEFER   55 (199)
T ss_dssp             HHHHHHHHHHHHHT---TCC---H--------------HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc---CCC---H--------------HHHHHHHHHHHHHHHHHhH
Confidence            45788888888542   222   2              3567888999999999986


No 93 
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=65.01  E-value=19  Score=21.21  Aligned_cols=48  Identities=6%  Similarity=-0.040  Sum_probs=30.5

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      .++|...|++++++     .|.+   ....++.+.-++. +++.++|+..-++++..
T Consensus        81 ~~~A~~~~~~~~~~-----~~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~al~~  128 (148)
T 2dba_A           81 YDKAETEASKAIEK-----DGGD---VKALYRRSQALEK-LGRLDQAVLDLQRCVSL  128 (148)
T ss_dssp             HHHHHHHHHHHHHH-----TSCC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhh-----CccC---HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHc
Confidence            44667777777654     3444   3344555555554 79999998888777653


No 94 
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=64.60  E-value=26  Score=22.95  Aligned_cols=47  Identities=15%  Similarity=0.102  Sum_probs=25.8

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .+.|...|++|+++     .|.++   ....+.+..++. +++.++|+...++++.
T Consensus        93 ~~~A~~~~~~al~~-----~~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~a~~  139 (275)
T 1xnf_A           93 FDAAYEAFDSVLEL-----DPTYN---YAHLNRGIALYY-GGRDKLAQDDLLAFYQ  139 (275)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCT---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc-----Ccccc---HHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence            34566666666653     23332   233334444443 6777777777766654


No 95 
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=64.30  E-value=15  Score=26.59  Aligned_cols=55  Identities=13%  Similarity=0.172  Sum_probs=36.1

Q ss_pred             HHHHHHHHHHHHHHHHhcC-------CCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKM-------QPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L-------~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .+.|...|++|+++....-       ...+|.+..+.+|.+.-+.. +++.++|+...++|+.
T Consensus       163 ~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~  224 (336)
T 1p5q_A          163 YKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLK-LQAFSAAIESCNKALE  224 (336)
T ss_dssp             HHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence            4578888888887532110       00124456677788777665 7899999988887754


No 96 
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=63.79  E-value=27  Score=24.50  Aligned_cols=54  Identities=11%  Similarity=0.030  Sum_probs=36.2

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcch-hhhhhhHHHHHHHHhcChHHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIR-LGLALNFSVFYYEIINSPARACHLAKQVQYSC   79 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~Pir-LgL~LN~SVF~yEil~~~~~A~~iAk~Afd~A   79 (98)
                      .++|...|++|+++....   .++.. .....|.+..+.. +++.++|+..-++++.-.
T Consensus       131 ~~~A~~~~~~Al~~~~~~---~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~  185 (307)
T 2ifu_A          131 LSKAVHLYQQAAAVFENE---ERLRQAAELIGKASRLLVR-QQKFDEAAASLQKEKSMY  185 (307)
T ss_dssp             HHHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhC---CChhHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence            467889999999887541   12323 2344556666655 789999988888776643


No 97 
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=63.56  E-value=11  Score=24.84  Aligned_cols=54  Identities=9%  Similarity=0.049  Sum_probs=33.6

Q ss_pred             HHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         24 DSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        24 ~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      .|...|++++++....-.+.++.......+.+.++. .+++.++|+..-++++.-
T Consensus       197 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~  250 (272)
T 3u4t_A          197 LAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYT-INRDKVKADAAWKNILAL  250 (272)
T ss_dssp             TTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhc
Confidence            377889999888753222221222233444455554 479999999988887653


No 98 
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=63.42  E-value=36  Score=24.26  Aligned_cols=57  Identities=11%  Similarity=0.183  Sum_probs=43.8

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHh
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSCIG   81 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~Ai~   81 (98)
                      .+.+...|+++++++...  ...+.|..+.+|.+..+.+ .++.++|..+-+++......
T Consensus       111 ~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~~~-~g~~~~A~~~l~~~~~~~~~  167 (434)
T 4b4t_Q          111 LDDQIFVCEKSIEFAKRE--KRVFLKHSLSIKLATLHYQ-KKQYKDSLALINDLLREFKK  167 (434)
T ss_dssp             HHHHHHHHHHHHHHHHHS--SCCSSHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHh--CccHHHHHHHHHHHHHHHH-ccChHHHHHHHHHHHHHHHh
Confidence            457788888998888653  3457788888888888777 68999999998888766443


No 99 
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=62.75  E-value=25  Score=21.81  Aligned_cols=47  Identities=9%  Similarity=-0.044  Sum_probs=29.4

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         23 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        23 ~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      +.|...+++|+++     .|.++   ...++.+.-++. +++.++|+..-++++.-
T Consensus        80 ~~A~~~~~~al~~-----~p~~~---~a~~~~g~~~~~-~g~~~~A~~~~~~al~l  126 (162)
T 3rkv_A           80 HEAEETSSEVLKR-----EETNE---KALFRRAKARIA-AWKLDEAEEDLKLLLRN  126 (162)
T ss_dssp             HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhc-----CCcch---HHHHHHHHHHHH-HhcHHHHHHHHHHHHhc
Confidence            4566666666654     45554   344555555554 79999998887776543


No 100
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=62.33  E-value=18  Score=27.45  Aligned_cols=54  Identities=11%  Similarity=0.151  Sum_probs=37.6

Q ss_pred             HHHHHHHHHHHHHHHHhcCC--------CCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQ--------PTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~--------pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      -+.|...|++|+++.... +        ..+|.+..+.+|.+.-++. +++.++|+...++|+.
T Consensus       284 ~~~A~~~y~~Al~~~p~~-~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~  345 (457)
T 1kt0_A          284 YMQAVIQYGKIVSWLEME-YGLSEKESKASESFLLAAFLNLAMCYLK-LREYTKAVECCDKALG  345 (457)
T ss_dssp             HHHHHHHHHHHHHHHTTC-CSCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccc-ccCChHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHh
Confidence            457888899988764211 0        0134567778888887776 7999999988888754


No 101
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=62.03  E-value=22  Score=20.90  Aligned_cols=49  Identities=10%  Similarity=0.034  Sum_probs=33.0

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSC   79 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~A   79 (98)
                      .+.|...|++++++     .|.+|   ....+.+..++. +++.++|+..-++++...
T Consensus        59 ~~~A~~~~~~al~~-----~p~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~  107 (137)
T 3q49_B           59 PEQALADCRRALEL-----DGQSV---KAHFFLGQCQLE-MESYDEAIANLQRAYSLA  107 (137)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----CchhH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHHHC
Confidence            35677788888764     34433   345556665555 799999998888887654


No 102
>2r17_C Vacuolar protein sorting-associated protein 35; protein transport, membrane, phosphorylation; 2.80A {Homo sapiens}
Probab=62.00  E-value=3.8  Score=31.27  Aligned_cols=42  Identities=26%  Similarity=0.426  Sum_probs=33.2

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhh-hhhHHHHHHHHhc
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGL-ALNFSVFYYEIIN   63 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL-~LN~SVF~yEil~   63 (98)
                      -++.+++-++|+.+|...+.+.-++-|=+ +||..+|+||--+
T Consensus       211 ~krVleCLqkaLkiA~~~~d~~~~v~LfveILn~ylyff~~g~  253 (298)
T 2r17_C          211 GKRVMECLKKALKIANQCMDPSLQVQLFIEILNRYIYFYEKEN  253 (298)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             hHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHhhhhCCC
Confidence            66899999999999998877654444443 8999999999644


No 103
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=61.83  E-value=30  Score=22.58  Aligned_cols=46  Identities=13%  Similarity=0.210  Sum_probs=22.4

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         23 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        23 ~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      ++|...|++|+++     .|.++   ....+.+..+.. .++.++|+...++++.
T Consensus        60 ~~A~~~~~~al~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~al~  105 (275)
T 1xnf_A           60 ALARNDFSQALAI-----RPDMP---EVFNYLGIYLTQ-AGNFDAAYEAFDSVLE  105 (275)
T ss_dssp             HHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHc-----CCCcH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHh
Confidence            3455555555543     22222   223333433333 5677776666665544


No 104
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=61.81  E-value=15  Score=25.15  Aligned_cols=57  Identities=18%  Similarity=0.202  Sum_probs=30.1

Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHhcCCCCCc---chhhhhhhHHHHH----HHHhcChHHHHHHHHHHH
Q psy11270         15 GDTRNAVVEDSQKAYQEAFDIAKSKMQPTHP---IRLGLALNFSVFY----YEIINSPARACHLAKQVQ   76 (98)
Q Consensus        15 ~~~~~~~~~~a~~aY~~A~~~A~~~L~pt~P---irLgL~LN~SVF~----yEil~~~~~A~~iAk~Af   76 (98)
                      |.+-.+..+.|..+|++|+++     .|.++   ..||.++.---++    -+-.++.++|++.-++|+
T Consensus        55 g~~al~~~~eAi~~le~AL~l-----dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl  118 (158)
T 1zu2_A           55 ISDAKQMIQEAITKFEEALLI-----DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAV  118 (158)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhHhHHHHHHHHHHHHHHh-----CcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHH
Confidence            334445678999999999874     45554   2355544321111    011245666666554443


No 105
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=60.39  E-value=20  Score=19.93  Aligned_cols=48  Identities=21%  Similarity=0.222  Sum_probs=31.9

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      .+.|...|++++..     .|.+|   ....+.+..++. +++.++|+...+++++.
T Consensus        20 ~~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~   67 (118)
T 1elw_A           20 IDDALQCYSEAIKL-----DPHNH---VLYSNRSAAYAK-KGDYQKAYEDGCKTVDL   67 (118)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Confidence            45678888888764     34443   344455555554 79999999888887654


No 106
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=60.19  E-value=19  Score=25.16  Aligned_cols=11  Identities=18%  Similarity=0.434  Sum_probs=5.3

Q ss_pred             HHHHHHHHHHH
Q psy11270         24 DSQKAYQEAFD   34 (98)
Q Consensus        24 ~a~~aY~~A~~   34 (98)
                      .|...|++|++
T Consensus        22 ~A~~~~~~al~   32 (281)
T 2c2l_A           22 EAAACYGRAIT   32 (281)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            44455555543


No 107
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=59.12  E-value=26  Score=24.59  Aligned_cols=54  Identities=11%  Similarity=0.036  Sum_probs=33.5

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSC   79 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~A   79 (98)
                      .+.|...+++|+..    .|+.+|...+.+++.-...|-..++.++|....+++..-+
T Consensus        30 ~~~A~~~~~~al~~----~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~   83 (373)
T 1hz4_A           30 PDEAERLAKLALEE----LPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMA   83 (373)
T ss_dssp             HHHHHHHHHHHHHT----CCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHc----CCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence            34566667766642    3555555455555543344445799999988888876644


No 108
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=58.88  E-value=31  Score=23.98  Aligned_cols=47  Identities=19%  Similarity=0.239  Sum_probs=24.6

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         23 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        23 ~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      ++|...|++|+++     .|.+   .....|.+..+.. +++.++|+..-++++.-
T Consensus       264 ~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~  310 (365)
T 4eqf_A          264 EEAVEAYTRALEI-----QPGF---IRSRYNLGISCIN-LGAYREAVSNFLTALSL  310 (365)
T ss_dssp             HHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-HTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhc-----CCCc---hHHHHHHHHHHHH-CCCHHHHHHHHHHHHHh
Confidence            4566666666543     2222   2333344444433 57777777766666554


No 109
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=58.86  E-value=28  Score=26.44  Aligned_cols=51  Identities=18%  Similarity=0.076  Sum_probs=35.9

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         21 VVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        21 ~~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      -.++|...|++|+++     .|.+|-...+..|.+..++. +++.++|++..++|+.
T Consensus       236 ~~~~A~~~~~~al~~-----~p~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~  286 (474)
T 4abn_A          236 ISQQALSAYAQAEKV-----DRKASSNPDLHLNRATLHKY-EESYGEALEGFSQAAA  286 (474)
T ss_dssp             HHHHHHHHHHHHHHH-----CGGGGGCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHh-----CCCcccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence            366788888888865     23222555667777777665 7999999888887754


No 110
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=58.82  E-value=22  Score=19.91  Aligned_cols=24  Identities=17%  Similarity=0.180  Sum_probs=12.0

Q ss_pred             hHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         53 NFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        53 N~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      +.+..++. +++.++|....+++++
T Consensus        82 ~la~~~~~-~~~~~~A~~~~~~~~~  105 (125)
T 1na0_A           82 NLGNAYYK-QGDYDEAIEYYQKALE  105 (125)
T ss_dssp             HHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-hcCHHHHHHHHHHHHH
Confidence            34444333 4666666555555443


No 111
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=58.61  E-value=37  Score=23.55  Aligned_cols=54  Identities=9%  Similarity=-0.092  Sum_probs=35.2

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhh-HHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALN-FSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN-~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      .+.|...|++|+++... +  -+|...+.+++ .+..+...+++.++|+..-++|++-
T Consensus        93 ~~~A~~~~~~Al~l~~~-~--g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~  147 (292)
T 1qqe_A           93 SVNAVDSLENAIQIFTH-R--GQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEW  147 (292)
T ss_dssp             HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH-c--CCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Confidence            45788999999998753 1  23444444444 4544444359999998888777653


No 112
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=57.72  E-value=23  Score=24.67  Aligned_cols=45  Identities=11%  Similarity=0.079  Sum_probs=23.1

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHH
Q psy11270         23 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQ   76 (98)
Q Consensus        23 ~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Af   76 (98)
                      +.|...|++|+++-     |.   ...+.++++.|+.. +++.++|+.+-++|.
T Consensus       186 ~~A~~~~~~al~~~-----p~---~~~~~~~~~~~~~~-~g~~~~A~~~~~~al  230 (308)
T 2ond_A          186 SVAFKIFELGLKKY-----GD---IPEYVLAYIDYLSH-LNEDNNTRVLFERVL  230 (308)
T ss_dssp             HHHHHHHHHHHHHH-----TT---CHHHHHHHHHHHHT-TCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhC-----CC---cHHHHHHHHHHHHH-CCCHHHHHHHHHHHH
Confidence            34555666665431     22   23445666666543 466666655544443


No 113
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=57.60  E-value=21  Score=24.67  Aligned_cols=60  Identities=5%  Similarity=0.081  Sum_probs=38.6

Q ss_pred             HHHHHHHHHHHHHHHHhcCCC---CCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHhc
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQP---THPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSCIGA   82 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~p---t~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~Ai~~   82 (98)
                      .++|...|++++++......|   .+|.......+.+..+. -+++.++|..+.+++++.--..
T Consensus       301 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~l~~~~~~  363 (368)
T 1fch_A          301 HREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALS-MLGQSDAYGAADARDLSTLLTM  363 (368)
T ss_dssp             HHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHH-HHTCGGGHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHH-HhCChHhHHHhHHHHHHHHHHh
Confidence            567889999999887544222   23444455555555544 4799999999888766654433


No 114
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=57.57  E-value=30  Score=23.33  Aligned_cols=15  Identities=13%  Similarity=-0.132  Sum_probs=8.1

Q ss_pred             hcChHHHHHHHHHHH
Q psy11270         62 INSPARACHLAKQVQ   76 (98)
Q Consensus        62 l~~~~~A~~iAk~Af   76 (98)
                      +++.++|+..-++++
T Consensus       319 ~g~~~~A~~~~~~a~  333 (359)
T 3ieg_A          319 EEMYDEAIQDYEAAQ  333 (359)
T ss_dssp             TTCHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHH
Confidence            556555555555443


No 115
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=57.30  E-value=36  Score=22.03  Aligned_cols=27  Identities=7%  Similarity=-0.039  Sum_probs=13.4

Q ss_pred             hhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         50 LALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        50 L~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      ...+.+..++. +++.++|+..-++++.
T Consensus        78 ~~~~l~~~~~~-~~~~~~A~~~~~~al~  104 (228)
T 4i17_A           78 AYIGKSAAYRD-MKNNQEYIATLTEGIK  104 (228)
T ss_dssp             HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence            33344444333 4666666655555443


No 116
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=55.82  E-value=39  Score=21.89  Aligned_cols=48  Identities=15%  Similarity=0.035  Sum_probs=31.4

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      -++|...|++++++.    |+.++   ....|.+.-++ -+++.++|+...++++.
T Consensus        23 ~~~A~~~~~~al~~~----~~~~~---~~~~~~~~~~~-~~~~~~~A~~~~~~al~   70 (228)
T 4i17_A           23 YAVAFEKYSEYLKLT----NNQDS---VTAYNCGVCAD-NIKKYKEAADYFDIAIK   70 (228)
T ss_dssp             HHHHHHHHHHHHHHT----TTCCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcc----CCCCc---HHHHHHHHHHH-HhhcHHHHHHHHHHHHH
Confidence            567888899888753    22344   34444444444 48999999988887753


No 117
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=55.77  E-value=40  Score=22.45  Aligned_cols=50  Identities=16%  Similarity=0.088  Sum_probs=33.2

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhh--------------hhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLA--------------LNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~--------------LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .+.|...|+++++     +.|.+|......              ++.+..++. .++.++|+..-++++.
T Consensus       113 ~~~A~~~~~~~l~-----~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~  176 (261)
T 3qky_A          113 TRKAIEAFQLFID-----RYPNHELVDDATQKIRELRAKLARKQYEAARLYER-RELYEAAAVTYEAVFD  176 (261)
T ss_dssp             HHHHHHHHHHHHH-----HCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-----HCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence            4567777777764     346666544333              566666665 7999999888877664


No 118
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=54.84  E-value=27  Score=24.94  Aligned_cols=51  Identities=12%  Similarity=0.147  Sum_probs=29.5

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .+.|...|+++++     +.|.+|..+..+++.-+-.+.-+++.++|+...+++..
T Consensus       273 ~~~A~~~~~~~l~-----~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~  323 (450)
T 2y4t_A          273 YTDATSKYESVMK-----TEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQ  323 (450)
T ss_dssp             HHHHHHHHHHHHH-----HCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh-----cCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence            3456667777665     34566654333333323333447888888887777653


No 119
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=54.56  E-value=35  Score=21.30  Aligned_cols=46  Identities=11%  Similarity=0.299  Sum_probs=28.9

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHH-HHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARAC-HLAKQVQ   76 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~-~iAk~Af   76 (98)
                      .++|...|++|+++     .|.+|   ...+|.+..+.+. ++.++|. ...++|+
T Consensus        81 ~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~~-~~~~~aa~~~~~~al  127 (150)
T 4ga2_A           81 TDKAVECYRRSVEL-----NPTQK---DLVLKIAELLCKN-DVTDGRAKYWVERAA  127 (150)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHH-CSSSSHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHc-CChHHHHHHHHHHHH
Confidence            56789999999864     44444   4567777777764 5544443 3345544


No 120
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=54.53  E-value=26  Score=23.90  Aligned_cols=55  Identities=9%  Similarity=0.012  Sum_probs=30.6

Q ss_pred             HHHHHHHHHHHHHHHH--hcCCCCCcchh-hhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAK--SKMQPTHPIRL-GLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~--~~L~pt~PirL-gL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      -+.|..+|++|+++-.  -++.|.++--+ .-..|-++=+. -+++.++|+.--++|+.
T Consensus        73 ~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~-~lgr~eEAl~~y~kAle  130 (159)
T 2hr2_A           73 FDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALD-GLGRGAEAMPEFKKVVE  130 (159)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHH-HCCCHHHHHHHHHHHHh
Confidence            4578889999988622  13455544111 00023333222 37898888876666654


No 121
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=54.51  E-value=27  Score=24.42  Aligned_cols=54  Identities=9%  Similarity=0.118  Sum_probs=32.8

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      -+.|.++|++|+++... +.  +|...+.+++-.--.|.-+++.++|+..-++|++-
T Consensus        52 ~~~A~~~~~~al~~~~~-~~--~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l  105 (307)
T 2ifu_A           52 LEQAKDAYLQEAEAHAN-NR--SLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVM  105 (307)
T ss_dssp             HHHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH-cC--CHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence            35788888888888753 22  34344444444334444567777777777766543


No 122
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=53.34  E-value=42  Score=22.39  Aligned_cols=50  Identities=12%  Similarity=0.128  Sum_probs=32.5

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         23 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        23 ~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      +.|...|++++     ...|.+|......++.+.-++. +++.++|+..-+++++.
T Consensus        32 ~~A~~~~~~~l-----~~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~~   81 (261)
T 3qky_A           32 DRAIEYFKAVF-----TYGRTHEWAADAQFYLARAYYQ-NKEYLLAASEYERFIQI   81 (261)
T ss_dssp             HHHHHHHHHHG-----GGCSCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH-----HhCCCCcchHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHH
Confidence            34555555554     3467787665555666655555 79999998887776653


No 123
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=52.63  E-value=43  Score=21.44  Aligned_cols=47  Identities=17%  Similarity=0.041  Sum_probs=26.9

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .+.|...|++++++     .|.+|   .+..+.+..++. +++.++|+...++++.
T Consensus       155 ~~~A~~~~~~a~~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~al~  201 (258)
T 3uq3_A          155 WPNAVKAYTEMIKR-----APEDA---RGYSNRAAALAK-LMSFPEAIADCNKAIE  201 (258)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc-----CcccH---HHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence            34666777777653     23333   334444544443 6777777777776654


No 124
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=52.32  E-value=44  Score=21.49  Aligned_cols=47  Identities=9%  Similarity=0.004  Sum_probs=30.8

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .+.|...|++++++     .|.||.   ...|.++-++. +++.++|+..-++|+.
T Consensus        52 ~~eA~~~~~~al~~-----~P~~~~---~~~~lg~~~~~-~g~~~~Ai~~~~~al~   98 (151)
T 3gyz_A           52 IEEAEVFFRFLCIY-----DFYNVD---YIMGLAAIYQI-KEQFQQAADLYAVAFA   98 (151)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHH-HccHHHHHHHHHHHHh
Confidence            45677788877753     556654   34555555554 7999998887777643


No 125
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=52.18  E-value=43  Score=21.34  Aligned_cols=47  Identities=11%  Similarity=0.133  Sum_probs=23.8

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .++|...|++++++     .|.+   .....+.+..+. -+++.++|+...+++++
T Consensus        73 ~~~A~~~~~~~~~~-----~~~~---~~~~~~la~~~~-~~~~~~~A~~~~~~~~~  119 (243)
T 2q7f_A           73 LERALAFYDKALEL-----DSSA---ATAYYGAGNVYV-VKEMYKEAKDMFEKALR  119 (243)
T ss_dssp             HHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHc-----CCcc---hHHHHHHHHHHH-HhccHHHHHHHHHHHHH
Confidence            34556666666543     2222   222333343333 36777777776666654


No 126
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=51.31  E-value=44  Score=21.85  Aligned_cols=47  Identities=9%  Similarity=-0.018  Sum_probs=26.5

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .++|...|+++++     +.|.++.   ...+.+..+ --+++.++|+...+++++
T Consensus        19 ~~~A~~~~~~~l~-----~~p~~~~---~~~~l~~~~-~~~~~~~~A~~~~~~a~~   65 (272)
T 3u4t_A           19 YAEAIEVFNKLEA-----KKYNSPY---IYNRRAVCY-YELAKYDLAQKDIETYFS   65 (272)
T ss_dssp             HHHHHHHHHHHHH-----TTCCCST---THHHHHHHH-HHTTCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHH-----hCCCcHH---HHHHHHHHH-HHHhhHHHHHHHHHHHHh
Confidence            4567777777764     3444442   223333333 346788887777666654


No 127
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=51.24  E-value=37  Score=28.03  Aligned_cols=46  Identities=15%  Similarity=0.198  Sum_probs=23.7

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQ   76 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Af   76 (98)
                      .++|.++|++|+++     .|.+   .....|.+.-+.+ +++.++|+..-++|+
T Consensus        93 ~~~A~~~~~kAl~l-----~P~~---~~a~~~Lg~~~~~-~g~~~eAi~~~~~Al  138 (723)
T 4gyw_A           93 VQGALQCYTRAIQI-----NPAF---ADAHSNLASIHKD-SGNIPEAIASYRTAL  138 (723)
T ss_dssp             HHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Confidence            34566666666653     2333   2333444444444 566666666555553


No 128
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=51.22  E-value=33  Score=21.74  Aligned_cols=49  Identities=12%  Similarity=0.039  Sum_probs=32.7

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCc-------------chhhhhhhHHHHHHHHhcChHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHP-------------IRLGLALNFSVFYYEIINSPARACHLAKQVQ   76 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~P-------------irLgL~LN~SVF~yEil~~~~~A~~iAk~Af   76 (98)
                      .+.|...|++++++     .|.++             -......|.+..++. +++.++|+..-++++
T Consensus        87 ~~~A~~~~~~al~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al  148 (213)
T 1hh8_A           87 YDLAIKDLKEALIQ-----LRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK-KEEWKKAEEQLALAT  148 (213)
T ss_dssp             HHHHHHHHHHHHHT-----TTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----CCCccHHHHHHhccccCccchHHHHHHHHHHHH-ccCHHHHHHHHHHHH
Confidence            45677788888764     33333             334555667766665 799999988877764


No 129
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=51.21  E-value=56  Score=22.40  Aligned_cols=47  Identities=17%  Similarity=0.224  Sum_probs=23.2

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         23 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        23 ~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      ++|...|++++++     .|.++   ....+.+..+.. +++.++|+..-++++.-
T Consensus       268 ~~A~~~~~~al~~-----~~~~~---~~~~~l~~~~~~-~g~~~~A~~~~~~al~~  314 (368)
T 1fch_A          268 EEAVAAYRRALEL-----QPGYI---RSRYNLGISCIN-LGAHREAVEHFLEALNM  314 (368)
T ss_dssp             HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHHh
Confidence            4455555555543     22222   223334443333 56777776666665543


No 130
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=51.06  E-value=52  Score=22.79  Aligned_cols=47  Identities=19%  Similarity=0.247  Sum_probs=23.2

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .++|...|++|+++     .|.++   ....+.+..+. -+++.++|+..-++++.
T Consensus       115 ~~~A~~~~~~al~~-----~p~~~---~~~~~l~~~~~-~~g~~~~A~~~~~~al~  161 (365)
T 4eqf_A          115 EQAAIVALQRCLEL-----QPNNL---KALMALAVSYT-NTSHQQDACEALKNWIK  161 (365)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHH-ccccHHHHHHHHHHHHH
Confidence            34555555555543     22322   22233333333 36777777766666554


No 131
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=50.87  E-value=49  Score=23.76  Aligned_cols=47  Identities=9%  Similarity=-0.031  Sum_probs=29.3

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      -++|...|++|+++     .|.++   ....|.+.-++. +++.++|+..-++|+.
T Consensus       212 ~~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~  258 (336)
T 1p5q_A          212 FSAAIESCNKALEL-----DSNNE---KGLSRRGEAHLA-VNDFELARADFQKVLQ  258 (336)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence            35677777777764     34443   334555555554 6888888777776654


No 132
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=50.69  E-value=34  Score=19.75  Aligned_cols=44  Identities=9%  Similarity=-0.022  Sum_probs=29.7

Q ss_pred             HHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         25 SQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        25 a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      +...|+++++     +.|.+|   .+..|.+..++. .++.++|+...++++.
T Consensus         4 a~~~~~~al~-----~~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~   47 (115)
T 2kat_A            4 ITERLEAMLA-----QGTDNM---LLRFTLGKTYAE-HEQFDAALPHLRAALD   47 (115)
T ss_dssp             HHHHHHHHHT-----TTCCCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH-----hCCCcH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence            5667777764     455554   345556666555 7999999988887764


No 133
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=50.46  E-value=39  Score=21.92  Aligned_cols=47  Identities=15%  Similarity=0.196  Sum_probs=25.5

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .++|.+.|++++++     .|.+   ..+..+.+..+.. .++.++|+...++++.
T Consensus        87 ~~~A~~~~~~a~~~-----~~~~---~~~~~~la~~~~~-~g~~~~A~~~~~~~~~  133 (252)
T 2ho1_A           87 PKLADEEYRKALAS-----DSRN---ARVLNNYGGFLYE-QKRYEEAYQRLLEASQ  133 (252)
T ss_dssp             HHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHH-----CcCc---HHHHHHHHHHHHH-HhHHHHHHHHHHHHHh
Confidence            34566666666553     2222   2333444444443 6777777777666554


No 134
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=50.31  E-value=18  Score=27.65  Aligned_cols=48  Identities=8%  Similarity=0.047  Sum_probs=36.9

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcch-hhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIR-LGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~Pir-LgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .++|.+.|++|++++        |-. +..-..|+-|+..-.++.+.|.+.-++|+.
T Consensus       220 ~ekA~~~ferAL~Ln--------P~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~  268 (301)
T 3u64_A          220 MEKAHTAFEHLTRYC--------SAHDPDHHITYADALCIPLNNRAGFDEALDRALA  268 (301)
T ss_dssp             HHHHHHHHHHHHHHC--------CTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhC--------CCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHc
Confidence            567999999999864        543 666677788887767888888877777654


No 135
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=49.89  E-value=41  Score=27.81  Aligned_cols=46  Identities=15%  Similarity=0.236  Sum_probs=28.2

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQ   76 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Af   76 (98)
                      .++|...|++|+++     .|.+   .....|.+.-+.+ +++.++|+..-++|+
T Consensus        25 ~~eAi~~~~kAl~l-----~P~~---~~a~~nLg~~l~~-~g~~~eA~~~~~~Al   70 (723)
T 4gyw_A           25 IEEAVRLYRKALEV-----FPEF---AAAHSNLASVLQQ-QGKLQEALMHYKEAI   70 (723)
T ss_dssp             HHHHHHHHHHHHHH-----CSCC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Confidence            56788888888764     2333   3344555555554 677777776666654


No 136
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=49.87  E-value=41  Score=20.41  Aligned_cols=47  Identities=13%  Similarity=0.041  Sum_probs=29.9

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .+.|...|++++.     +.|.+|.   ...+.+..++. +++.++|+...++++.
T Consensus        34 ~~~A~~~~~~al~-----~~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~   80 (142)
T 2xcb_A           34 WDDAQKIFQALCM-----LDHYDAR---YFLGLGACRQS-LGLYEQALQSYSYGAL   80 (142)
T ss_dssp             HHHHHHHHHHHHH-----HCTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-----hCCccHH---HHHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence            3466777777764     3455543   33455555554 7999999888777654


No 137
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=49.61  E-value=37  Score=26.03  Aligned_cols=47  Identities=6%  Similarity=-0.123  Sum_probs=30.7

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .++|...|++|++     +.|.+   .....|.+.-++. +++.++|++.-++|+.
T Consensus        56 ~~~A~~~~~~al~-----l~p~~---~~~~~~lg~~~~~-~g~~~eA~~~~~~al~  102 (477)
T 1wao_1           56 YGYALGDATRAIE-----LDKKY---IKGYYRRAASNMA-LGKFRAALRDYETVVK  102 (477)
T ss_dssp             HHHHHHHHHHHHH-----SCTTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-----hCCCC---HHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence            4567777777765     34444   3445566665554 7999999888877754


No 138
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=48.65  E-value=80  Score=23.43  Aligned_cols=55  Identities=11%  Similarity=0.025  Sum_probs=34.9

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      .++|.+.|++++++..+ . +.+|-....+++.-.-.|...++.++|+++.+++++.
T Consensus       491 ~~~A~~~~~~~~~~~~~-~-~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~  545 (597)
T 2xpi_A          491 MQTAINHFQNALLLVKK-T-QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLL  545 (597)
T ss_dssp             HHHHHHHHHHHHHHHHH-S-CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhc-c-ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence            56788888888877543 1 3456543333333333344579999998888887654


No 139
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=48.63  E-value=47  Score=20.72  Aligned_cols=47  Identities=13%  Similarity=0.013  Sum_probs=29.7

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .+.|...|++++.     +.|.+|.-   ..|.++-+. -+++.++|+..-++++.
T Consensus        37 ~~~A~~~~~~al~-----~~p~~~~~---~~~lg~~~~-~~g~~~~A~~~~~~al~   83 (148)
T 2vgx_A           37 YEDAHXVFQALCV-----LDHYDSRF---FLGLGACRQ-AMGQYDLAIHSYSYGAV   83 (148)
T ss_dssp             HHHHHHHHHHHHH-----HCTTCHHH---HHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHH-----cCcccHHH---HHHHHHHHH-HHhhHHHHHHHHHHHHh
Confidence            3466667776664     35566543   345555554 47999998888777654


No 140
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=48.61  E-value=45  Score=23.17  Aligned_cols=12  Identities=17%  Similarity=0.340  Sum_probs=6.0

Q ss_pred             HHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAF   33 (98)
Q Consensus        22 ~~~a~~aY~~A~   33 (98)
                      .+.|...|++|+
T Consensus       115 ~~~A~~~~~~al  126 (308)
T 2ond_A          115 YEKVHSIYNRLL  126 (308)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            344555555554


No 141
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=47.64  E-value=52  Score=22.12  Aligned_cols=51  Identities=12%  Similarity=0.161  Sum_probs=33.0

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhh-hhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLG-LALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLg-L~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      .+.|...|++++++     .|.+|.... +..+.+..+.. +++.++|+...+++++.
T Consensus       250 ~~~A~~~~~~~~~~-----~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~  301 (359)
T 3ieg_A          250 YTDATSKYESVMKT-----EPSVAEYTVRSKERICHCFSK-DEKPVEAIRICSEVLQM  301 (359)
T ss_dssp             HHHHHHHHHHHHHH-----CCSSHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc-----CCCchHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence            45677777777653     355655433 34445555554 79999999988887653


No 142
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=47.62  E-value=52  Score=20.94  Aligned_cols=16  Identities=6%  Similarity=0.040  Sum_probs=8.3

Q ss_pred             hcChHHHHHHHHHHHH
Q psy11270         62 INSPARACHLAKQVQY   77 (98)
Q Consensus        62 l~~~~~A~~iAk~Afd   77 (98)
                      +++.++|+...+++++
T Consensus       206 ~~~~~~A~~~~~~~~~  221 (243)
T 2q7f_A          206 KENREKALEMLDKAID  221 (243)
T ss_dssp             TTCTTHHHHHHHHHHH
T ss_pred             ccCHHHHHHHHHHHHc
Confidence            4555555555555443


No 143
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=43.93  E-value=66  Score=21.11  Aligned_cols=50  Identities=12%  Similarity=0.075  Sum_probs=33.2

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      -+.|...|+++++     ..|.+|......++.+.-++. +++.++|+..-+++++
T Consensus        20 ~~~A~~~~~~~~~-----~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~   69 (225)
T 2yhc_A           20 WRQAITQLEALDN-----RYPFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFIR   69 (225)
T ss_dssp             HHHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-----hCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHH
Confidence            4567777777764     356677655555555555554 7999999887777654


No 144
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=43.68  E-value=67  Score=21.08  Aligned_cols=47  Identities=11%  Similarity=0.115  Sum_probs=29.4

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .+.|...|++|++     +.|.+|   ....|.+..+.. +++.++|+...++++.
T Consensus        21 ~~~A~~~~~~al~-----~~p~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~   67 (217)
T 2pl2_A           21 YDAALTLFERALK-----ENPQDP---EALYWLARTQLK-LGLVNPALENGKTLVA   67 (217)
T ss_dssp             HHHHHHHHHHHHT-----TSSSCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-----hCCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence            4567777777763     444443   344455554444 7888888887777654


No 145
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=43.54  E-value=80  Score=22.64  Aligned_cols=57  Identities=11%  Similarity=0.080  Sum_probs=37.5

Q ss_pred             HHHHHHHHHHHHHHHHHhcC--CCCC----cchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         21 VVEDSQKAYQEAFDIAKSKM--QPTH----PIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        21 ~~~~a~~aY~~A~~~A~~~L--~pt~----PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      -.+.|...|+++++.-...+  .|.+    |-......+.+..++. .++.++|+.+.++++..
T Consensus       204 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~l~~  266 (514)
T 2gw1_A          204 SYDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFL-KNDPLGAHEDIKKAIEL  266 (514)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHH-SSCHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhh
Confidence            36678888888877433334  4444    5555555556665554 79999999988887653


No 146
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=43.12  E-value=80  Score=23.71  Aligned_cols=17  Identities=12%  Similarity=0.022  Sum_probs=9.0

Q ss_pred             HHHhcChHHHHHHHHHH
Q psy11270         59 YEIINSPARACHLAKQV   75 (98)
Q Consensus        59 yEil~~~~~A~~iAk~A   75 (98)
                      |...+++++|+.+-+++
T Consensus       401 ~~~~~~~~~A~~~~e~a  417 (530)
T 2ooe_A          401 YYCSKDKSVAFKIFELG  417 (530)
T ss_dssp             HHHTCCHHHHHHHHHHH
T ss_pred             HHHcCChhHHHHHHHHH
Confidence            33456666655554444


No 147
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=43.07  E-value=53  Score=19.70  Aligned_cols=47  Identities=9%  Similarity=0.077  Sum_probs=27.3

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .+.|...|++|+++     .|.++   ....+.++-+.. +++.++|+..-++|+.
T Consensus        33 ~~~A~~~~~~al~~-----~P~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~   79 (121)
T 1hxi_A           33 LAEAALAFEAVCQK-----EPERE---EAWRSLGLTQAE-NEKDGLAIIALNHARM   79 (121)
T ss_dssp             HHHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence            45677777777653     34443   333444544443 6888887777666543


No 148
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=42.94  E-value=58  Score=20.13  Aligned_cols=48  Identities=15%  Similarity=0.192  Sum_probs=30.7

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcCh--HHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSP--ARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~--~~A~~iAk~Afd   77 (98)
                      .+.|...|++|+++.     |.+|   .+..+.+..+|.-.++.  ++|+...++++.
T Consensus        60 ~~~A~~~~~~al~~~-----p~~~---~~~~~la~~l~~~~~~~~~~~A~~~~~~al~  109 (177)
T 2e2e_A           60 YSNSLLAYRQALQLR-----GENA---ELYAALATVLYYQASQHMTAQTRAMIDKALA  109 (177)
T ss_dssp             HHHHHHHHHHHHHHH-----CSCH---HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcC-----CCCH---HHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Confidence            457888888887653     3443   34455666544446776  888887777654


No 149
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=42.82  E-value=43  Score=18.65  Aligned_cols=16  Identities=6%  Similarity=-0.116  Sum_probs=10.6

Q ss_pred             hcChHHHHHHHHHHHH
Q psy11270         62 INSPARACHLAKQVQY   77 (98)
Q Consensus        62 l~~~~~A~~iAk~Afd   77 (98)
                      .++.++|+.+.+++..
T Consensus        82 ~~~~~~A~~~~~~~~~   97 (136)
T 2fo7_A           82 QGDYDEAIEYYQKALE   97 (136)
T ss_dssp             TTCHHHHHHHHHHHHH
T ss_pred             hcCHHHHHHHHHHHHH
Confidence            5777777766666554


No 150
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=42.25  E-value=54  Score=19.57  Aligned_cols=16  Identities=13%  Similarity=0.011  Sum_probs=9.1

Q ss_pred             hcChHHHHHHHHHHHH
Q psy11270         62 INSPARACHLAKQVQY   77 (98)
Q Consensus        62 l~~~~~A~~iAk~Afd   77 (98)
                      .++.++|+...+++++
T Consensus       157 ~~~~~~A~~~~~~~~~  172 (186)
T 3as5_A          157 MGRHEEALPHFKKANE  172 (186)
T ss_dssp             TTCHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHH
Confidence            4566666655555544


No 151
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=42.20  E-value=24  Score=25.53  Aligned_cols=49  Identities=14%  Similarity=0.122  Sum_probs=33.3

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcc--------------hhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         23 EDSQKAYQEAFDIAKSKMQPTHPI--------------RLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        23 ~~a~~aY~~A~~~A~~~L~pt~Pi--------------rLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      +.|...|++|+.+.     |.++.              +..+.+|.+.-+.. +++.++|+...++++.
T Consensus       196 ~~A~~~y~~Al~~~-----p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~-~g~~~~A~~~~~~al~  258 (338)
T 2if4_A          196 EEAMQQYEMAIAYM-----GDDFMFQLYGKYQDMALAVKNPCHLNIAACLIK-LKRYDEAIGHCNIVLT  258 (338)
T ss_dssp             HHHHHHHHHHHHHS-----CHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHT-TTCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----ccchhhhhcccHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence            46788888888653     23331              22366777776665 7899999988888754


No 152
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=41.46  E-value=52  Score=23.37  Aligned_cols=56  Identities=13%  Similarity=-0.120  Sum_probs=39.9

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSC   79 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~A   79 (98)
                      .++|...|++|+.++.. .+ ..|.-.|...+.+.-+|...++.++|+..-.++|+..
T Consensus       191 ~~~A~~~~~~al~~~~~-~~-~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~  246 (434)
T 4b4t_Q          191 LAKSKASLTAARTAANS-IY-CPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESY  246 (434)
T ss_dssp             HHHHHHHHHHHHHHHHH-SC-CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhc-CC-CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence            45789999999988753 32 2233346666666666677899999999888887754


No 153
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=41.12  E-value=77  Score=21.04  Aligned_cols=25  Identities=20%  Similarity=0.179  Sum_probs=13.9

Q ss_pred             hHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         53 NFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        53 N~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      +.+..+. -+++.++|++..++++..
T Consensus       245 ~l~~~~~-~~g~~~~A~~~~~~a~~~  269 (327)
T 3cv0_A          245 NMAVSYS-NMSQYDLAAKQLVRAIYM  269 (327)
T ss_dssp             HHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHH-HhccHHHHHHHHHHHHHh
Confidence            3344333 357777777666665543


No 154
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=40.54  E-value=74  Score=21.13  Aligned_cols=46  Identities=17%  Similarity=0.321  Sum_probs=26.0

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHH---HhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYE---IINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yE---il~~~~~A~~iAk~Afd   77 (98)
                      .++|...|++|++       |.+|   ....|.+..+..   +.++.++|+..-++|.+
T Consensus        22 ~~~A~~~~~~a~~-------~~~~---~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~   70 (273)
T 1ouv_A           22 FTQAKKYFEKACD-------LKEN---SGCFNLGVLYYQGQGVEKNLKKAASFYAKACD   70 (273)
T ss_dssp             HHHHHHHHHHHHH-------TTCH---HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-------CCCH---HHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHH
Confidence            4567777777765       2333   122334444443   26777777777766654


No 155
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=39.60  E-value=47  Score=23.07  Aligned_cols=47  Identities=9%  Similarity=0.000  Sum_probs=29.8

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         23 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        23 ~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      +.|...|++|++     +.|.++   ....|.+.-+. -+++.++|+..-++++.-
T Consensus        55 ~~A~~~~~~al~-----~~p~~~---~~~~~lg~~~~-~~g~~~~A~~~~~~al~l  101 (281)
T 2c2l_A           55 EQALADCRRALE-----LDGQSV---KAHFFLGQCQL-EMESYDEAIANLQRAYSL  101 (281)
T ss_dssp             HHHHHHHHHHTT-----SCTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-----hCCCCH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHHh
Confidence            345555555543     445443   44556665555 479999999988887764


No 156
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=39.16  E-value=73  Score=24.02  Aligned_cols=45  Identities=9%  Similarity=0.096  Sum_probs=27.0

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHH
Q psy11270         23 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQ   76 (98)
Q Consensus        23 ~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Af   76 (98)
                      ++|...|++|+++     .|.++   ....+.+..++. .++.++|+...++|+
T Consensus       120 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al  164 (474)
T 4abn_A          120 PEAEVLLSKAVKL-----EPELV---EAWNQLGEVYWK-KGDVTSAHTCFSGAL  164 (474)
T ss_dssp             HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhh-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHH
Confidence            5677777777764     33333   333444544444 688888877766654


No 157
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=39.15  E-value=93  Score=25.63  Aligned_cols=64  Identities=13%  Similarity=0.005  Sum_probs=38.4

Q ss_pred             cccCCcchhHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHh-------------cChHHHHHHHHHH
Q psy11270         11 EVATGDTRNAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEII-------------NSPARACHLAKQV   75 (98)
Q Consensus        11 E~~~~~~~~~~~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil-------------~~~~~A~~iAk~A   75 (98)
                      |....++-.+.+++|.++|++|++..++--+.-+|--.-..||-| -.||+.             |.-+.|-.++++|
T Consensus       437 e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k~~~tdd~~~v~~~~~~a-k~yE~aGDyy~~AA~k~~yG~~eqAe~l~~~A  513 (526)
T 2wb7_A          437 KGMNNENAIEYAQGAIDEYKAAINDLQKAAQQDDYQMFLNYLNAA-KKHEMAGDYYVNAARKALNGDLEQAKIDAEKA  513 (526)
T ss_dssp             HHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred             hccCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHh-hhhhhccHHHHHHHHHHhcCccHHHHHHHHHH
Confidence            334444456678899999999999986433344444444444443 336654             4455566666554


No 158
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=38.51  E-value=89  Score=23.73  Aligned_cols=15  Identities=7%  Similarity=0.027  Sum_probs=7.7

Q ss_pred             hcChHHHHHHHHHHH
Q psy11270         62 INSPARACHLAKQVQ   76 (98)
Q Consensus        62 l~~~~~A~~iAk~Af   76 (98)
                      +++.++|++.-++++
T Consensus       104 ~g~~~~A~~~~~~al  118 (568)
T 2vsy_A          104 AGQAEAAAAAYTRAH  118 (568)
T ss_dssp             TTCHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHH
Confidence            455555555544443


No 159
>1h3z_A Hypothetical 62.8 kDa protein C215.07C; nuclear protein, PWWP, chromatin, beta-barrel; NMR {Schizosaccharomyces pombe} SCOP: b.34.9.2
Probab=37.92  E-value=19  Score=22.80  Aligned_cols=22  Identities=18%  Similarity=0.132  Sum_probs=18.7

Q ss_pred             HHHHHHHHHHhcchhccccCCc
Q psy11270         71 LAKQVQYSCIGASRVQILSVPR   92 (98)
Q Consensus        71 iAk~Afd~Ai~~~d~~~~~~~~   92 (98)
                      -..+||+.|....|-++|-.|.
T Consensus        88 ~l~~Ay~~A~~~~~~~~f~~~~  109 (109)
T 1h3z_A           88 SLIKAYKMAQSTPDLDSLSVPS  109 (109)
T ss_dssp             HHHHHHHHHHHCCSGGGSCCCC
T ss_pred             HHHHHHHHHhccCCHhhccCCC
Confidence            3467999999999999999883


No 160
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=37.90  E-value=87  Score=20.75  Aligned_cols=15  Identities=20%  Similarity=0.127  Sum_probs=8.5

Q ss_pred             hcChHHHHHHHHHHH
Q psy11270         62 INSPARACHLAKQVQ   76 (98)
Q Consensus        62 l~~~~~A~~iAk~Af   76 (98)
                      .++.++|+...++++
T Consensus       219 ~~~~~~A~~~~~~a~  233 (327)
T 3cv0_A          219 GNRPQEALDAYNRAL  233 (327)
T ss_dssp             TTCHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHH
Confidence            566666665555543


No 161
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=36.77  E-value=66  Score=24.49  Aligned_cols=48  Identities=17%  Similarity=0.195  Sum_probs=31.0

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      .++|.+.|++|++     +.|.+   .....|.+..+.. +++.++|++..++++..
T Consensus        39 ~~~A~~~~~~al~-----~~p~~---~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~   86 (568)
T 2vsy_A           39 TTAGEMAVQRGLA-----LHPGH---PEAVARLGRVRWT-QQRHAEAAVLLQQASDA   86 (568)
T ss_dssp             HHHHHHHHHHHHT-----TSTTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-----hCCCC---HHHHHHHHHHHHH-CCCHHHHHHHHHHHHhc
Confidence            4466677777664     34444   3445566665554 79999998888877553


No 162
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=35.92  E-value=95  Score=20.59  Aligned_cols=47  Identities=11%  Similarity=0.126  Sum_probs=26.5

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         23 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        23 ~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      ++|...|+++++     +.|.+|   .+..+.+..+.. .++.++|+...+++++.
T Consensus       176 ~~A~~~~~~al~-----~~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~  222 (330)
T 3hym_B          176 KLAERFFSQALS-----IAPEDP---FVMHEVGVVAFQ-NGEWKTAEKWFLDALEK  222 (330)
T ss_dssp             HHHHHHHHHHHT-----TCTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-----hCCCCh---HHHHHHHHHHHH-cccHHHHHHHHHHHHHH
Confidence            345555555543     334443   334445555444 68888888877777664


No 163
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=35.62  E-value=79  Score=19.60  Aligned_cols=48  Identities=13%  Similarity=0.011  Sum_probs=29.6

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      .++|...|+++++.     .|.++   ....+.+..+.. +++.++|+...++++..
T Consensus       129 ~~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~  176 (225)
T 2vq2_A          129 FGLAEAYLKRSLAA-----QPQFP---PAFKELARTKML-AGQLGDADYYFKKYQSR  176 (225)
T ss_dssp             HHHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----CCCCc---hHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence            45677777777654     33333   233444444443 79999998888877653


No 164
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=34.50  E-value=1e+02  Score=21.74  Aligned_cols=47  Identities=13%  Similarity=0.098  Sum_probs=30.2

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .++|...|++++++     .|.+|   ....+.+..+. .+++.++|+...++++.
T Consensus       311 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~-~~~~~~~A~~~~~~al~  357 (450)
T 2y4t_A          311 PVEAIRVCSEVLQM-----EPDNV---NALKDRAEAYL-IEEMYDEAIQDYETAQE  357 (450)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Confidence            45677777777654     34444   33444454444 47999999988888754


No 165
>2ia9_A Putative septation protein spovg; APC85465, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2; 3.00A {Bacillus subtilis} SCOP: d.366.1.1
Probab=33.96  E-value=30  Score=22.34  Aligned_cols=35  Identities=14%  Similarity=0.253  Sum_probs=28.5

Q ss_pred             chhhhcccCCcchhHHHHHHHHHHHHHHHHHHhcC
Q psy11270          6 YRYLAEVATGDTRNAVVEDSQKAYQEAFDIAKSKM   40 (98)
Q Consensus         6 yRYlaE~~~~~~~~~~~~~a~~aY~~A~~~A~~~L   40 (98)
                      ||=+|...+.+-|+++...-+++|+++++..+.++
T Consensus        60 y~DI~hPit~e~Re~i~~aVl~aY~~~~~~~~~~~   94 (100)
T 2ia9_A           60 FRDITHPINSSTRGKIQDAVLNEYHRLGDTEALEF   94 (100)
T ss_dssp             EEESEEESSHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEECCHHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence            66677777778899999999999999998765544


No 166
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=33.65  E-value=1.2e+02  Score=21.12  Aligned_cols=47  Identities=15%  Similarity=-0.011  Sum_probs=26.9

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      .+.|...|+++++.     .|.+   ..+..|.++.+. -+++.++|...-++++.
T Consensus       182 ~~eA~~~~~~~l~~-----~p~~---~~~~~~la~~~~-~~g~~~eA~~~l~~al~  228 (291)
T 3mkr_A          182 LQDAYYIFQEMADK-----CSPT---LLLLNGQAACHM-AQGRWEAAEGVLQEALD  228 (291)
T ss_dssp             HHHHHHHHHHHHHH-----SCCC---HHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Confidence            34555666665542     2333   334444555444 37888888887777654


No 167
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=32.96  E-value=85  Score=23.10  Aligned_cols=47  Identities=13%  Similarity=0.081  Sum_probs=27.9

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         23 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        23 ~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      ++|...|++|++     +.|.++   ....+.+.-++ -+++.++|+..-++|+..
T Consensus       290 ~~A~~~~~~al~-----~~p~~~---~a~~~lg~~~~-~~g~~~eA~~~l~~Al~l  336 (370)
T 1ihg_A          290 QGAVDSCLEALE-----IDPSNT---KALYRRAQGWQ-GLKEYDQALADLKKAQEI  336 (370)
T ss_dssp             HHHHHHHHHHHT-----TCTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-----hCchhH---HHHHHHHHHHH-HccCHHHHHHHHHHHHHh
Confidence            345555555553     344443   33445555544 479999998887777643


No 168
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=32.48  E-value=1.4e+02  Score=21.58  Aligned_cols=48  Identities=10%  Similarity=0.169  Sum_probs=32.2

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      .+.|...|++++++     .|.++   ....+.+..+.. +++.++|+..-+++++-
T Consensus       444 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~~-~g~~~~A~~~~~~al~~  491 (537)
T 3fp2_A          444 FNAAIKLLTKACEL-----DPRSE---QAKIGLAQLKLQ-MEKIDEAIELFEDSAIL  491 (537)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence            55677777777654     44554   344555555554 79999999988887654


No 169
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=32.29  E-value=79  Score=18.58  Aligned_cols=55  Identities=11%  Similarity=-0.014  Sum_probs=34.4

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      -+.|..-|++|++.....-. ..+.+-.+..++++=++ -+++.++|+..-++|+.-
T Consensus        21 y~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~~~~~-~~g~~~~A~~~~~~al~l   75 (104)
T 2v5f_A           21 YYHTELWMEQALRQLDEGEI-STIDKVSVLDYLSYAVY-QQGDLDKALLLTKKLLEL   75 (104)
T ss_dssp             HHHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhhhccCC-CcccHHHHHHHHHHHHH-HccCHHHHHHHHHHHHhc
Confidence            45688888888876542211 11233344444554444 589999999998888643


No 170
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=31.07  E-value=55  Score=22.90  Aligned_cols=50  Identities=16%  Similarity=0.280  Sum_probs=35.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCC----cchhhhhhhHHHHHHHHhcChHHHHHHHHHH
Q psy11270         20 AVVEDSQKAYQEAFDIAKSKMQPTH----PIRLGLALNFSVFYYEIINSPARACHLAKQV   75 (98)
Q Consensus        20 ~~~~~a~~aY~~A~~~A~~~L~pt~----PirLgL~LN~SVF~yEil~~~~~A~~iAk~A   75 (98)
                      ..+++-.+.|++|..    .+||..    .-+.-|=++|+.| -|+ +|+++|.++=+.+
T Consensus        33 ~~l~rlrd~YerAia----~~Pp~k~~~wrrYI~LWIrYA~~-~ei-~D~d~aR~vy~~a   86 (161)
T 4h7y_A           33 ALLNKLIGRYSQAIE----ALPPDKYGQNESFARIQVRFAEL-KAI-QEPDDARDYFQMA   86 (161)
T ss_dssp             HHHHHHHHHHHHHHH----HSCGGGGTTCHHHHHHHHHHHHH-HHH-HCGGGCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHH----cCCccccccHHHHHHHHHHHHHH-HHh-cCHHHHHHHHHHH
Confidence            567888899998874    566643    3446788999999 454 8888775554443


No 171
>1h3l_A RNA polymerase sigma factor; transcription, DNA-binding, transcription regulation; 2.37A {Streptomyces coelicolor A3} SCOP: a.177.1.1
Probab=30.71  E-value=76  Score=17.98  Aligned_cols=25  Identities=16%  Similarity=0.211  Sum_probs=21.4

Q ss_pred             HHhcChHHHHHHHHHHHHHHHhcch
Q psy11270         60 EIINSPARACHLAKQVQYSCIGASR   84 (98)
Q Consensus        60 Eil~~~~~A~~iAk~Afd~Ai~~~d   84 (98)
                      -++++.+.|-.+.+.+|-.+....+
T Consensus        31 ~~~~~~~~aeD~vQe~fl~~~~~~~   55 (87)
T 1h3l_A           31 RMTRNPADAEDLVQETYAKAYASFH   55 (87)
T ss_dssp             HHHSCHHHHHHHHHHHHHHHHHHGG
T ss_pred             HHHCCHHHHHHHHHHHHHHHHHHHH
Confidence            3568999999999999999887765


No 172
>2xpn_B SPT6, chromatin structure modulator; transcription, elongation, histone chaperone, RNA polymerase mRNA export; 1.95A {Encephalitozoon cuniculi} PDB: 2xpo_B
Probab=30.30  E-value=11  Score=18.70  Aligned_cols=13  Identities=38%  Similarity=0.769  Sum_probs=9.7

Q ss_pred             ccccchhhhcccC
Q psy11270          2 KGDYYRYLAEVAT   14 (98)
Q Consensus         2 KGDyyRYlaE~~~   14 (98)
                      .||-|||+.|-..
T Consensus        11 tG~EYrYile~~~   23 (26)
T 2xpn_B           11 TGEEYRYVLESDP   23 (26)
T ss_pred             CCceEEEEeecCC
Confidence            4888999987543


No 173
>3s0r_A De novo designed helical assembly; interacts with single walled nanotube (SWNT), de novo protei; 2.45A {Artificial gene}
Probab=30.00  E-value=54  Score=16.53  Aligned_cols=15  Identities=20%  Similarity=0.100  Sum_probs=9.1

Q ss_pred             hHHHHHHHHHHHHHH
Q psy11270         65 PARACHLAKQVQYSC   79 (98)
Q Consensus        65 ~~~A~~iAk~Afd~A   79 (98)
                      .+.|.+.|++|++.|
T Consensus         3 aesaleyaqqaleka   17 (30)
T 3s0r_A            3 AESALEYAQQALEKA   17 (30)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             hHhHHHHHHHHHHHH
Confidence            355666666666654


No 174
>1j6w_A Autoinducer-2 production protein LUXS; alpha-beta fold, signaling protein; 2.10A {Haemophilus influenzae} SCOP: d.185.1.2 PDB: 1joe_A
Probab=29.72  E-value=1.2e+02  Score=21.45  Aligned_cols=67  Identities=19%  Similarity=0.225  Sum_probs=49.7

Q ss_pred             chhHHHHHHHHHHHHHHHH-HHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHhcchhccccCCc
Q psy11270         17 TRNAVVEDSQKAYQEAFDI-AKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSCIGASRVQILSVPR   92 (98)
Q Consensus        17 ~~~~~~~~a~~aY~~A~~~-A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~Ai~~~d~~~~~~~~   92 (98)
                      +-+++++--..+++..++. ...+.|.+++.-=|-.++.|+         +.|-++|++-+++.+...+.+.|.-|.
T Consensus        96 ~~~~v~~~~~~~l~~Il~~~~~~eVPga~~~qCGny~~HsL---------~~Ak~~A~~~L~~~~~~~~~~~l~yp~  163 (175)
T 1j6w_A           96 NEQKVSEAWLASMQDVLGVQDQASIPELNIYQCGSYTEHSL---------EDAHEIAKNVIARGIGVNKNEDLSLDN  163 (175)
T ss_dssp             CHHHHHHHHHHHHHHHHTCCCGGGCTTCSTTTCTTTTSCCH---------HHHHHHHHHHHHHCCEEECGGGGBCCC
T ss_pred             CHHHHHHHHHHHHHHHHhhcccCCCCCCChhcCCChHHCCH---------HHHHHHHHHHHHhccccCchhhccCCH
Confidence            3445666566666665532 125799999999998887664         589999999999988888888887774


No 175
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=28.69  E-value=1.5e+02  Score=20.64  Aligned_cols=14  Identities=7%  Similarity=-0.144  Sum_probs=6.8

Q ss_pred             hcChHHHHHHHHHH
Q psy11270         62 INSPARACHLAKQV   75 (98)
Q Consensus        62 l~~~~~A~~iAk~A   75 (98)
                      .++.++|+..-+++
T Consensus       250 ~g~~~~A~~~~~~a  263 (388)
T 1w3b_A          250 QGLIDLAIDTYRRA  263 (388)
T ss_dssp             TTCHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHH
Confidence            45555555444443


No 176
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=28.49  E-value=1.6e+02  Score=20.98  Aligned_cols=48  Identities=8%  Similarity=0.075  Sum_probs=31.5

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      .+.|...|++++++     .|.+|   ....+.+..+. -+++.++|+..-+++++-
T Consensus       431 ~~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~a~~~  478 (514)
T 2gw1_A          431 FIEATNLLEKASKL-----DPRSE---QAKIGLAQMKL-QQEDIDEAITLFEESADL  478 (514)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHHh
Confidence            56778888888764     34443   33344454444 479999999888887653


No 177
>1vje_A Autoinducer-2 production protein LUXS; structural genomics, hydrolase; 1.64A {Deinococcus radiodurans} SCOP: d.185.1.2 PDB: 1vgx_A 1inn_A 1j6v_A 1vh2_A
Probab=27.90  E-value=64  Score=22.70  Aligned_cols=67  Identities=13%  Similarity=0.135  Sum_probs=47.5

Q ss_pred             chhHHHHHHHHHHHHHHHHHHhc-CCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHhcchhccccCCccc
Q psy11270         17 TRNAVVEDSQKAYQEAFDIAKSK-MQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYSCIGASRVQILSVPRYH   94 (98)
Q Consensus        17 ~~~~~~~~a~~aY~~A~~~A~~~-L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~Ai~~~d~~~~~~~~~~   94 (98)
                      +-+++++--..+++..++  ..+ .|.+++.-=|-.++.|         .+.|-++|++-+++.+...+.+-+.-..-|
T Consensus        95 ~~~~v~~~~~~~l~~Il~--~~e~VPga~~~qCGny~~Hs---------L~~Ak~~A~~~L~~~l~~~~~~~~~~~~~~  162 (166)
T 1vje_A           95 DEQGVMKAFEAALKDTAG--HDQPIPGVSELECGNYRDHD---------LAAARQHARDVLDQGLKVQETILLERGSHH  162 (166)
T ss_dssp             CHHHHHHHHHHHHHHHHT--CCSCCTTCSTTTCTTTTCCC---------HHHHHHHHHHHHHHCCCBCCCCBC------
T ss_pred             CHHHHHHHHHHHHHHHHh--cCCCCCCcChhcCCChHhCC---------HHHHHHHHHHHHHhhhccCchhhhhhcccc
Confidence            445666666666666665  345 9999999999888766         458999999999999998887776654433


No 178
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=27.59  E-value=1.7e+02  Score=21.07  Aligned_cols=55  Identities=15%  Similarity=0.088  Sum_probs=31.4

Q ss_pred             HHHHHHHHHHHHHHh--cCCCCCcc---hhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         24 DSQKAYQEAFDIAKS--KMQPTHPI---RLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        24 ~a~~aY~~A~~~A~~--~L~pt~Pi---rLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      .+...|++|+..-++  .+.|.+|-   .++.++..--..+...++.++|+...++++..
T Consensus       213 ~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~  272 (537)
T 3fp2_A          213 VANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESINL  272 (537)
T ss_dssp             HHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhc
Confidence            334455555554432  34566643   24545555444555689999999888877653


No 179
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=27.41  E-value=1.5e+02  Score=22.32  Aligned_cols=46  Identities=9%  Similarity=-0.047  Sum_probs=27.0

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQ   76 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Af   76 (98)
                      -+.|...|++|+++     .|.++   ...+|.+.-++. +++.++|+..-++|+
T Consensus       333 ~~~A~~~~~~al~~-----~p~~~---~a~~~~g~a~~~-~g~~~~A~~~~~~al  378 (457)
T 1kt0_A          333 YTKAVECCDKALGL-----DSANE---KGLYRRGEAQLL-MNEFESAKGDFEKVL  378 (457)
T ss_dssp             HHHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc-----CCccH---HHHHHHHHHHHH-ccCHHHHHHHHHHHH
Confidence            34677777777764     34442   334445554444 688888777666653


No 180
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=26.81  E-value=23  Score=23.02  Aligned_cols=22  Identities=14%  Similarity=0.071  Sum_probs=14.0

Q ss_pred             HHHHHHHhcchhccccCCccccccC
Q psy11270         74 QVQYSCIGASRVQILSVPRYHTTWC   98 (98)
Q Consensus        74 ~Afd~Ai~~~d~~~~~~~~~~~~~~   98 (98)
                      +-|++.++.   +-.-+--+|.|||
T Consensus        15 e~f~~ii~~---~~~vvi~khatwC   36 (112)
T 3iv4_A           15 DQFEQVIEE---NKYVFVLKHSETC   36 (112)
T ss_dssp             HHHHHHHHH---CSEEEEEEECTTC
T ss_pred             HHHHHHHhc---CCCEEEEEECCcC
Confidence            337777764   2334445899999


No 181
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=26.03  E-value=1.4e+02  Score=19.46  Aligned_cols=48  Identities=6%  Similarity=0.050  Sum_probs=32.9

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHH-----HhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYE-----IINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yE-----il~~~~~A~~iAk~Afd~   78 (98)
                      .++|...|++|.++      |-+|.   -..|.++.|..     +..+.++|+..-++|.+.
T Consensus       145 ~~~A~~~~~~A~~~------~~~~~---a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~  197 (212)
T 3rjv_A          145 DVKASEYFKGSSSL------SRTGY---AEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLE  197 (212)
T ss_dssp             HHHHHHHHHHHHHT------SCTTH---HHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHc------CCCHH---HHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHc
Confidence            56788888888642      22332   34667777776     444899999999888765


No 182
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=25.63  E-value=1.2e+02  Score=24.23  Aligned_cols=53  Identities=11%  Similarity=-0.004  Sum_probs=24.9

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHH
Q psy11270         23 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQ   76 (98)
Q Consensus        23 ~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Af   76 (98)
                      ++|.+.|++|++.+-..-...+|-.....++.+.-+++ +++.++|+...++++
T Consensus       408 ~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~-~g~~~~A~~~~~~al  460 (681)
T 2pzi_A          408 VQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLD-LGDVAKATRKLDDLA  460 (681)
T ss_dssp             HHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHH-HTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHh-cCCHHHHHHHHHHHh
Confidence            46667777766221111111223333334444444443 577777777666654


No 183
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=25.22  E-value=1.7e+02  Score=20.27  Aligned_cols=46  Identities=20%  Similarity=0.140  Sum_probs=24.7

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Q psy11270         23 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQY   77 (98)
Q Consensus        23 ~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd   77 (98)
                      +.|.+.|+++++     +.|.+|.   ...|.+..+. -.++.++|+..-+++..
T Consensus       254 ~~A~~~~~~al~-----~~p~~~~---~~~~l~~~~~-~~g~~~~A~~~~~~al~  299 (388)
T 1w3b_A          254 DLAIDTYRRAIE-----LQPHFPD---AYCNLANALK-EKGSVAEAEDCYNTALR  299 (388)
T ss_dssp             HHHHHHHHHHHH-----TCSSCHH---HHHHHHHHHH-HHSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh-----hCCCCHH---HHHHHHHHHH-HcCCHHHHHHHHHHHHh
Confidence            455666666654     3444442   3334444333 36777777777666543


No 184
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=23.93  E-value=1.2e+02  Score=21.71  Aligned_cols=45  Identities=9%  Similarity=0.023  Sum_probs=28.0

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHH
Q psy11270         23 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQ   76 (98)
Q Consensus        23 ~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Af   76 (98)
                      +.|...|++|+++     .|.++   ...+|.+.-++. +++.++|+..-++++
T Consensus       247 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~a~~~-~g~~~~A~~~l~~al  291 (338)
T 2if4_A          247 DEAIGHCNIVLTE-----EEKNP---KALFRRGKAKAE-LGQMDSARDDFRKAQ  291 (338)
T ss_dssp             HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHT-TTCHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHH
Confidence            4567777777653     34443   334555555444 789988887777664


No 185
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=21.09  E-value=1.6e+02  Score=18.27  Aligned_cols=43  Identities=19%  Similarity=0.266  Sum_probs=26.4

Q ss_pred             HHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHH
Q psy11270         25 SQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQ   76 (98)
Q Consensus        25 a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Af   76 (98)
                      +...|++|++     +.|.+|   ...+|.+..+.. .++.++|+..-++++
T Consensus        93 a~~~~~~al~-----~~P~~~---~~~~~la~~~~~-~g~~~~A~~~~~~~l  135 (176)
T 2r5s_A           93 ELKRLEQELA-----ANPDNF---ELACELAVQYNQ-VGRDEEALELLWNIL  135 (176)
T ss_dssp             HHHHHHHHHH-----HSTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH-----hCCCCH---HHHHHHHHHHHH-cccHHHHHHHHHHHH
Confidence            3555666654     234443   555666666554 688888887776654


No 186
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=20.27  E-value=31  Score=22.09  Aligned_cols=46  Identities=13%  Similarity=0.004  Sum_probs=34.0

Q ss_pred             cchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHhcchhccccCC
Q psy11270         45 PIRLGLALNFSVFYYEIINSPARACHLAKQVQYSCIGASRVQILSVP   91 (98)
Q Consensus        45 PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~Ai~~~d~~~~~~~   91 (98)
                      |.++.-.-..+.|+-+|-...+....-+.+++.+|+.++..+- ++|
T Consensus         5 ~~~~~~~~~~~~~Ld~vs~~f~~~a~~~~~~l~~Al~~L~~~p-sNP   50 (92)
T 2g0u_A            5 PTPLLADYEWSGYLTGIGRAFDDGVKDLNKQLQDAQANLTKNP-SDP   50 (92)
T ss_dssp             CCCCTTSSSSTHHHHHHHGGGCTTTHHHHHHHHHHHHHHHHST-TCH
T ss_pred             chHHHhcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCH
Confidence            4444444467889999988888888888889999998886543 444


No 187
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=20.15  E-value=2.7e+02  Score=20.52  Aligned_cols=48  Identities=8%  Similarity=0.083  Sum_probs=31.0

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Q psy11270         22 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVQYS   78 (98)
Q Consensus        22 ~~~a~~aY~~A~~~A~~~L~pt~PirLgL~LN~SVF~yEil~~~~~A~~iAk~Afd~   78 (98)
                      .+.|.+.|++++++     .|.+|   ....+.+.. |.-.++.++|.+..+++++-
T Consensus       532 ~~~A~~~~~~~~~~-----~p~~~---~~~~~l~~~-~~~~g~~~~A~~~~~~~l~~  579 (597)
T 2xpi_A          532 YDAAIDALNQGLLL-----STNDA---NVHTAIALV-YLHKKIPGLAITHLHESLAI  579 (597)
T ss_dssp             HHHHHHHHHHHHHH-----SSCCH---HHHHHHHHH-HHHTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-----CCCCh---HHHHHHHHH-HHHhCCHHHHHHHHHHHHhc
Confidence            45677778777764     34554   333333433 44589999999988887653


Done!