BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11271
(78 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A2I469|RL38_MACHI 60S ribosomal protein L38 OS=Maconellicoccus hirsutus GN=RpL38
PE=3 SV=1
Length = 78
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/78 (82%), Positives = 66/78 (84%), Gaps = 8/78 (10%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPREIKEIKEFL+KARRKDAKSV IK+N P N KFKVRCSRFLYTLVITD EK
Sbjct: 1 MPREIKEIKEFLIKARRKDAKSVKIKKN--------PTNVKFKVRCSRFLYTLVITDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSLPPGLQVKEIK
Sbjct: 53 AEKLKQSLPPGLQVKEIK 70
>sp|Q4GX87|RL38_JULON 60S ribosomal protein L38 OS=Julodis onopordi GN=RpL38 PE=3 SV=1
Length = 70
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/78 (79%), Positives = 66/78 (84%), Gaps = 8/78 (10%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPREI EIK+FLLKARRKDAKSV IK+N PDN KFKVRCSRFLYTLVITD EK
Sbjct: 1 MPREITEIKDFLLKARRKDAKSVKIKKN--------PDNVKFKVRCSRFLYTLVITDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSLPPGLQVKE++
Sbjct: 53 AEKLKQSLPPGLQVKEVR 70
>sp|Q5MGL3|RL38_LONON 60S ribosomal protein L38 OS=Lonomia obliqua GN=RpL38 PE=3 SV=1
Length = 70
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/78 (79%), Positives = 67/78 (85%), Gaps = 8/78 (10%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPREIK+IK+FLLKARRKDAKSV IK+N P+N KFKVRCSRFLYTLVITD EK
Sbjct: 1 MPREIKDIKDFLLKARRKDAKSVEIKKN--------PENVKFKVRCSRFLYTLVITDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSLPPGLQVKE+K
Sbjct: 53 AEKLKQSLPPGLQVKEVK 70
>sp|Q4GX86|RL38_TIMBA 60S ribosomal protein L38 OS=Timarcha balearica GN=RpL38 PE=3
SV=1
Length = 70
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/78 (79%), Positives = 66/78 (84%), Gaps = 8/78 (10%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPRE+ EIKEFLL ARRKDAKSV IK+N P+NTKFKVRCSRFLYTLVITD EK
Sbjct: 1 MPRELTEIKEFLLTARRKDAKSVKIKKN--------PENTKFKVRCSRFLYTLVITDREK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSLPPGLQVKE+K
Sbjct: 53 AEKLKQSLPPGLQVKEVK 70
>sp|Q6F450|RL38_PLUXY 60S ribosomal protein L38 OS=Plutella xylostella GN=RpL38 PE=3
SV=1
Length = 70
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/78 (79%), Positives = 67/78 (85%), Gaps = 8/78 (10%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPREIK+IK+FLLKARRKDAKSV IK+N P+N KFKVRCSRFLYTLVITD EK
Sbjct: 1 MPREIKDIKDFLLKARRKDAKSVKIKKN--------PENVKFKVRCSRFLYTLVITDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSLPPGLQVKE+K
Sbjct: 53 AEKLKQSLPPGLQVKEVK 70
>sp|Q5UAP8|RL38_BOMMO 60S ribosomal protein L38 OS=Bombyx mori GN=RpL38 PE=3 SV=1
Length = 70
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/78 (78%), Positives = 67/78 (85%), Gaps = 8/78 (10%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPREIK+IK+FL+KARRKDAKSV IK+N P+N KFKVRCSRFLYTLVITD EK
Sbjct: 1 MPREIKDIKDFLIKARRKDAKSVKIKKN--------PENVKFKVRCSRFLYTLVITDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSLPPGLQVKE+K
Sbjct: 53 AEKLKQSLPPGLQVKEVK 70
>sp|Q962S5|RL38_SPOFR 60S ribosomal protein L38 OS=Spodoptera frugiperda GN=RpL38 PE=3
SV=1
Length = 70
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 61/78 (78%), Positives = 65/78 (83%), Gaps = 8/78 (10%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPREIK+IK+FLLKARRKDAKSV IK+N N KFKVRCSRFLYTLVITD EK
Sbjct: 1 MPREIKDIKDFLLKARRKDAKSVKIKKN--------QQNVKFKVRCSRFLYTLVITDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSLPPGLQVKE+K
Sbjct: 53 AEKLKQSLPPGLQVKEVK 70
>sp|Q56FC8|RL38_LYSTE 60S ribosomal protein L38 OS=Lysiphlebus testaceipes GN=RpL38
PE=3 SV=1
Length = 76
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/78 (76%), Positives = 65/78 (83%), Gaps = 8/78 (10%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPREIKEIK+FL+ ARRKDAKSV IK+N +N KFKVRCSRFLYTLVITD EK
Sbjct: 1 MPREIKEIKDFLVTARRKDAKSVKIKKN--------AENVKFKVRCSRFLYTLVITDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSLPPGLQVKE+K
Sbjct: 53 AEKLKQSLPPGLQVKEVK 70
>sp|A7L6A2|RL38_ARTSF 60S ribosomal protein L38 OS=Artemia franciscana GN=RPL38 PE=3
SV=1
Length = 70
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 67/78 (85%), Gaps = 8/78 (10%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MP+++ EIK+FL+KARRKDAKS IK+N PDNTKFK+RCSRFLYTLVITD+EK
Sbjct: 1 MPKQLMEIKDFLIKARRKDAKSCKIKKN--------PDNTKFKLRCSRFLYTLVITDSEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLK+SLPPGLQVKE+K
Sbjct: 53 AEKLKKSLPPGLQVKELK 70
>sp|P63174|RL38_RAT 60S ribosomal protein L38 OS=Rattus norvegicus GN=Rpl38 PE=1 SV=2
Length = 70
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 64/78 (82%), Gaps = 8/78 (10%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPR+I+EIK+FLL ARRKDAKSV IK+N DN KFKVRCSR+LYTLVITD EK
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKN--------KDNVKFKVRCSRYLYTLVITDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSLPPGL VKE+K
Sbjct: 53 AEKLKQSLPPGLAVKELK 70
>sp|P63173|RL38_HUMAN 60S ribosomal protein L38 OS=Homo sapiens GN=RPL38 PE=1 SV=2
Length = 70
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 64/78 (82%), Gaps = 8/78 (10%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPR+I+EIK+FLL ARRKDAKSV IK+N DN KFKVRCSR+LYTLVITD EK
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKN--------KDNVKFKVRCSRYLYTLVITDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSLPPGL VKE+K
Sbjct: 53 AEKLKQSLPPGLAVKELK 70
>sp|Q32PB9|RL38_BOVIN 60S ribosomal protein L38 OS=Bos taurus GN=RPL38 PE=3 SV=4
Length = 70
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 64/78 (82%), Gaps = 8/78 (10%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPR+I+EIK+FLL ARRKDAKSV IK+N DN KFKVRCSR+LYTLVITD EK
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKN--------KDNVKFKVRCSRYLYTLVITDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSLPPGL VKE+K
Sbjct: 53 AEKLKQSLPPGLAVKELK 70
>sp|Q1HRT4|RL38_AEDAE 60S ribosomal protein L38 OS=Aedes aegypti GN=RpL38 PE=3 SV=1
Length = 70
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 66/78 (84%), Gaps = 8/78 (10%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MP+EIKE+K+FL+KARRKDA++V IK+N +NTKFK+RCSR+LYTLV+ D EK
Sbjct: 1 MPQEIKEVKDFLIKARRKDARAVKIKKN--------ENNTKFKIRCSRYLYTLVVQDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSLPPGLQVKE+K
Sbjct: 53 AEKLKQSLPPGLQVKEVK 70
>sp|Q4PMD1|RL38_IXOSC 60S ribosomal protein L38 OS=Ixodes scapularis GN=RpL38 PE=3 SV=1
Length = 71
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 67/79 (84%), Gaps = 9/79 (11%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDN-TKFKVRCSRFLYTLVITDNE 59
MP+++KEIKEFLL ARRKDAKSV IK+N PDN TKFKVRCS++LYT+V+T+ E
Sbjct: 1 MPKQLKEIKEFLLTARRKDAKSVKIKKN--------PDNVTKFKVRCSKYLYTIVVTEKE 52
Query: 60 KAEKLKQSLPPGLQVKEIK 78
KAEKLKQSLPPGLQVKE+K
Sbjct: 53 KAEKLKQSLPPGLQVKELK 71
>sp|Q9JJI8|RL38_MOUSE 60S ribosomal protein L38 OS=Mus musculus GN=Rpl38 PE=2 SV=3
Length = 70
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 64/78 (82%), Gaps = 8/78 (10%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPR+I+EIK+FLL ARRKDAKSV IK+N DN KFKVRCSR+LYTLVITD EK
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKN--------KDNVKFKVRCSRYLYTLVITDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSLPPGL VK++K
Sbjct: 53 AEKLKQSLPPGLAVKDLK 70
>sp|Q6XIM7|RL38_DROYA 60S ribosomal protein L38 OS=Drosophila yakuba GN=RpL38 PE=3 SV=1
Length = 70
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 64/78 (82%), Gaps = 8/78 (10%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPREIKE+K+FL KARR DA++V IK+N P NTKFK+RCSRFLYTLV+ D EK
Sbjct: 1 MPREIKEVKDFLNKARRSDARAVKIKKN--------PTNTKFKIRCSRFLYTLVVQDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
A+K+KQSLPPGLQVKE+K
Sbjct: 53 ADKIKQSLPPGLQVKEVK 70
>sp|Q9W5N2|RL38_DROME 60S ribosomal protein L38 OS=Drosophila melanogaster GN=RpL38
PE=3 SV=1
Length = 70
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 64/78 (82%), Gaps = 8/78 (10%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPREIKE+K+FL KARR DA++V IK+N P NTKFK+RCSRFLYTLV+ D EK
Sbjct: 1 MPREIKEVKDFLNKARRSDARAVKIKKN--------PTNTKFKIRCSRFLYTLVVQDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
A+K+KQSLPPGLQVKE+K
Sbjct: 53 ADKIKQSLPPGLQVKEVK 70
>sp|Q7Q0U1|RL38_ANOGA 60S ribosomal protein L38 OS=Anopheles gambiae GN=RpL38 PE=3 SV=2
Length = 70
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 66/78 (84%), Gaps = 8/78 (10%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MP+EIKE+K+FL+KARRKDA++V IK+N + NTKFK+RCSR+LYTLV+ D EK
Sbjct: 1 MPQEIKEVKDFLIKARRKDARAVKIKKNET--------NTKFKIRCSRYLYTLVVKDMEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSLPPGLQVKE+K
Sbjct: 53 AEKLKQSLPPGLQVKEVK 70
>sp|Q95V84|RL38_BRABE 60S ribosomal protein L38 OS=Branchiostoma belcheri GN=RPL38 PE=3
SV=1
Length = 70
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/78 (71%), Positives = 63/78 (80%), Gaps = 8/78 (10%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MP++I EIK+FLL ARRKDAKSV IK+N DN KFKVRCSR+LYTLVITD EK
Sbjct: 1 MPKQIHEIKDFLLTARRKDAKSVKIKKN--------KDNVKFKVRCSRYLYTLVITDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
A+KLKQSLPPGL VKE+K
Sbjct: 53 ADKLKQSLPPGLAVKELK 70
>sp|Q8HXB9|RL38_MACFA 60S ribosomal protein L38 OS=Macaca fascicularis GN=RPL38 PE=3
SV=3
Length = 70
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/76 (75%), Positives = 62/76 (81%), Gaps = 8/76 (10%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPR+I+EIK+FLL ARRKDAKSV IK+N DN KFKVRCSR+LYTLVITD EK
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKN--------KDNVKFKVRCSRYLYTLVITDKEK 52
Query: 61 AEKLKQSLPPGLQVKE 76
AEKLKQSLPPGL VKE
Sbjct: 53 AEKLKQSLPPGLAVKE 68
>sp|O17570|RL38_CAEEL 60S ribosomal protein L38 OS=Caenorhabditis elegans GN=rpl-38
PE=3 SV=2
Length = 70
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 65/78 (83%), Gaps = 8/78 (10%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MP+EIKEIK+FL+KARRKDAKSV IK+N +NTKFKVRC+ +LYTLV+ D +K
Sbjct: 1 MPKEIKEIKDFLVKARRKDAKSVKIKKN--------SNNTKFKVRCASYLYTLVVADKDK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSLPPG+QVKE+K
Sbjct: 53 AEKLKQSLPPGIQVKELK 70
>sp|O22860|RL38_ARATH 60S ribosomal protein L38 OS=Arabidopsis thaliana GN=RPL38A PE=3
SV=1
Length = 69
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 59/77 (76%), Gaps = 8/77 (10%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MP++I EIK+FLL ARRKDA+SV IKR+ D KFKVRCSR+LYTL + D EK
Sbjct: 1 MPKQIHEIKDFLLTARRKDARSVKIKRS--------KDIVKFKVRCSRYLYTLCVFDQEK 52
Query: 61 AEKLKQSLPPGLQVKEI 77
A+KLKQSLPPGL V+++
Sbjct: 53 ADKLKQSLPPGLSVQDL 69
>sp|O61570|RL38_OSTOS 60S ribosomal protein L38 OS=Ostertagia ostertagi GN=rpl-38 PE=3
SV=1
Length = 70
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 60/78 (76%), Gaps = 8/78 (10%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MP++I EIK+FL+ ARRKDAK V IK+N N KFKVRCSR+L+TLV+ D +K
Sbjct: 1 MPKQITEIKDFLVLARRKDAKIVKIKKN--------SLNVKFKVRCSRYLFTLVVNDKDK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSLPPG+QV E+K
Sbjct: 53 AEKLKQSLPPGIQVIELK 70
>sp|P46291|RL38_SOLLC 60S ribosomal protein L38 OS=Solanum lycopersicum GN=RPL38 PE=3
SV=1
Length = 69
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 60/77 (77%), Gaps = 8/77 (10%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MP++I EIK+FLL ARRKDA++V IK+N D KFKVRCS++LYTL ++D EK
Sbjct: 1 MPKQIHEIKDFLLTARRKDARTVKIKKN--------KDMVKFKVRCSKYLYTLCVSDFEK 52
Query: 61 AEKLKQSLPPGLQVKEI 77
A+KLKQSLPPGL V+++
Sbjct: 53 ADKLKQSLPPGLSVQDL 69
>sp|A6N9N3|RL38_ORNPR 60S ribosomal protein L38 OS=Ornithodoros parkeri GN=RpL38 PE=3
SV=1
Length = 71
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 9/79 (11%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDN-TKFKVRCSRFLYTLVITDNE 59
MP+++KEIK+FLL ARRKDAKSV IK+N PDN TKFKVRCS++LYT+V+ + E
Sbjct: 1 MPKQLKEIKDFLLTARRKDAKSVRIKKN--------PDNVTKFKVRCSKYLYTIVVKEKE 52
Query: 60 KAEKLKQSLPPGLQVKEIK 78
KAEKLKQSLPPGLQVKE+K
Sbjct: 53 KAEKLKQSLPPGLQVKELK 71
>sp|Q09JT4|RL38_ARGMO 60S ribosomal protein L38 OS=Argas monolakensis GN=RpL38 PE=3
SV=1
Length = 71
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 66/79 (83%), Gaps = 9/79 (11%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDN-TKFKVRCSRFLYTLVITDNE 59
MP+++KEIK+FLL ARRKDAKSV IK+N PDN TKFKVRCS++LYT+V+ + E
Sbjct: 1 MPKQLKEIKDFLLTARRKDAKSVRIKKN--------PDNVTKFKVRCSKYLYTIVVKEKE 52
Query: 60 KAEKLKQSLPPGLQVKEIK 78
KAEKLKQSLPPGLQVKE+K
Sbjct: 53 KAEKLKQSLPPGLQVKELK 71
>sp|Q9USR7|RL38A_SCHPO 60S ribosomal protein L38-1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl38a PE=3 SV=1
Length = 74
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 57/77 (74%), Gaps = 7/77 (9%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPR+I +IK+FL ARRKDA S IK+N +K+ KFK+RCS++LYTLV+ D +K
Sbjct: 1 MPRQISDIKQFLEIARRKDATSARIKKNTNKD-------VKFKLRCSKYLYTLVVADAKK 53
Query: 61 AEKLKQSLPPGLQVKEI 77
AEKL+QSLPP L V E+
Sbjct: 54 AEKLRQSLPPDLTVTEV 70
>sp|Q09900|RL38B_SCHPO 60S ribosomal protein L38-2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl38b PE=3 SV=1
Length = 74
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 53/77 (68%), Gaps = 7/77 (9%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPR++ +IK FL A R DA S +K+N +K KFK+RCSR+LYTLV+ D +K
Sbjct: 1 MPRQVTDIKLFLQLAHRGDATSARVKKNQNKA-------VKFKLRCSRYLYTLVVADAKK 53
Query: 61 AEKLKQSLPPGLQVKEI 77
AEKL+QSLPP L V E+
Sbjct: 54 AEKLRQSLPPALTVTEV 70
>sp|Q55GJ7|RL38_DICDI 60S ribosomal protein L38 OS=Dictyostelium discoideum GN=rpl38
PE=3 SV=1
Length = 75
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 53/77 (68%), Gaps = 7/77 (9%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPREI+EIK+FL+ R KDAK + IK+ + KN TKFKVRC R+LYTL + DN K
Sbjct: 1 MPREIREIKDFLVTVRNKDAKEIRIKK-VGKNL------TKFKVRCGRYLYTLRVADNAK 53
Query: 61 AEKLKQSLPPGLQVKEI 77
A KL Q+LPP + ++
Sbjct: 54 AAKLMQTLPPSIPTVQV 70
>sp|Q9C2B9|RL38_NEUCR 60S ribosomal protein L38 OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rpl-38 PE=3 SV=1
Length = 80
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 53/77 (68%), Gaps = 6/77 (7%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MP+EI +IK+F+ RRKDA + IK+N K KFKVRC ++LYTLV+ D++K
Sbjct: 1 MPQEIGDIKKFIEICRRKDASAARIKKN------KATQQIKFKVRCQKYLYTLVLKDSDK 54
Query: 61 AEKLKQSLPPGLQVKEI 77
AEKLK SLPP L + ++
Sbjct: 55 AEKLKASLPPSLTIADV 71
>sp|P49167|RL38_YEAST 60S ribosomal protein L38 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL38 PE=1 SV=1
Length = 78
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKP-DNTKFKVRCSRFLYTLVITDNE 59
M REI +IK+FL RR D K+ T+K N NK KP TKFKVR S LYTLVI D
Sbjct: 1 MAREITDIKQFLELTRRADVKTATVKINKKLNKAGKPFRQTKFKVRGSSSLYTLVINDAG 60
Query: 60 KAEKLKQSLPPGLQVKEI 77
KA+KL QSLPP L+V +
Sbjct: 61 KAKKLIQSLPPTLKVNRL 78
>sp|Q4N921|RL38_THEPA 60S ribosomal protein L38 OS=Theileria parva GN=RPL38 PE=3 SV=1
Length = 79
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MP+E+KE+K++L +R DA+SV + + SK +TKFKVRCSR+LYT + + K
Sbjct: 1 MPKELKELKDYLSVLKRPDARSVVVYKKKSKGGL---LSTKFKVRCSRYLYTFSVPNQVK 57
Query: 61 AEKLKQSLPPGLQVKEI 77
A K++ ++P L+ K I
Sbjct: 58 AAKVEATIPSHLEKKVI 74
>sp|Q4UGN5|RL38_THEAN 60S ribosomal protein L38 OS=Theileria annulata GN=RPL38 PE=3
SV=1
Length = 79
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MP+E+K++K++L +R DAKSV + + SK +TKFKVRCSR+LYT + + K
Sbjct: 1 MPKELKDLKDYLNVLKRPDAKSVVVYKKKSKGGLL---STKFKVRCSRYLYTFSVPNQVK 57
Query: 61 AEKLKQSLPPGLQVKEI 77
A K++ ++P L+ K I
Sbjct: 58 AAKVEATIPSNLEKKVI 74
>sp|Q22SV3|RL38_TETTS 60S ribosomal protein L38 OS=Tetrahymena thermophila (strain
SB210) GN=RPL38 PE=1 SV=2
Length = 89
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 1 MPREIKEIKEFL-LKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNE 59
MP+EI +IK+F+ L KD + + + K K TKFK+R ++LYT D +
Sbjct: 1 MPKEITDIKKFMKLWQNNKDTPATAGAKKVVYVKTNK-RITKFKLRGKKYLYTFKTADPK 59
Query: 60 KAEKLKQSLPPGLQVKEIK 78
A+ +K ++P EIK
Sbjct: 60 IAKGIKDAIPATYSKIEIK 78
>sp|Q9YFR9|RL38_AERPE 50S ribosomal protein L38E OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=rpl38e PE=3 SV=1
Length = 67
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MP E+K EF+ ++R + + D K K R R+LYTL + ++
Sbjct: 1 MPVELKSFDEFVK----------VVERAVECRVKRGKDVVKIKARTKRYLYTLKVPPEKE 50
Query: 61 AEKLKQ 66
AE L+Q
Sbjct: 51 AEVLEQ 56
>sp|Q10488|ETR1_SCHPO Probable trans-2-enoyl-CoA reductase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=etr1 PE=3 SV=1
Length = 372
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 15 ARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEKAEK--LKQSLPPGL 72
A+ KS+ + RN +PD K K + T+VITD E ++ +KQ +P +
Sbjct: 194 AKHFGYKSINVVRN-------RPDIEKLKEQLKSLGATIVITDEELMDRKTMKQKVPEWI 246
Query: 73 QVKEIK 78
Q E+K
Sbjct: 247 QGGEVK 252
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,589,763
Number of Sequences: 539616
Number of extensions: 843226
Number of successful extensions: 2165
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2093
Number of HSP's gapped (non-prelim): 46
length of query: 78
length of database: 191,569,459
effective HSP length: 49
effective length of query: 29
effective length of database: 165,128,275
effective search space: 4788719975
effective search space used: 4788719975
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)