Your job contains 1 sequence.
>psy11271
MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK
AEKLKQSLPPGLQVKEIK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11271
(78 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1BU66 - symbol:RPL38 "Uncharacterized protein"... 275 5.3e-24 1
UNIPROTKB|Q32PB9 - symbol:RPL38 "60S ribosomal protein L3... 275 5.3e-24 1
UNIPROTKB|P63173 - symbol:RPL38 "60S ribosomal protein L3... 275 5.3e-24 1
UNIPROTKB|F2Z568 - symbol:RPL38 "Uncharacterized protein"... 275 5.3e-24 1
RGD|1305573 - symbol:Rpl38 "ribosomal protein L38" specie... 275 5.3e-24 1
MGI|MGI:1914921 - symbol:Rpl38 "ribosomal protein L38" sp... 272 1.1e-23 1
FB|FBgn0040007 - symbol:RpL38 "Ribosomal protein L38" spe... 271 1.4e-23 1
UNIPROTKB|Q6XIM7 - symbol:RpL38 "60S ribosomal protein L3... 271 1.4e-23 1
RGD|1561636 - symbol:RGD1561636 "similar to 60S ribosomal... 271 1.4e-23 1
WB|WBGene00004452 - symbol:rpl-38 species:6239 "Caenorhab... 267 3.8e-23 1
RGD|1592976 - symbol:LOC680353 "similar to 60S ribosomal ... 265 6.1e-23 1
RGD|1595599 - symbol:LOC678816 "similar to 60S ribosomal ... 254 9.0e-22 1
UNIPROTKB|J3QL01 - symbol:RPL38 "60S ribosomal protein L3... 253 1.1e-21 1
UNIPROTKB|J3KT73 - symbol:RPL38 "60S ribosomal protein L3... 251 1.9e-21 1
UNIPROTKB|G3MY09 - symbol:LOC100297522 "Uncharacterized p... 246 6.3e-21 1
RGD|1586630 - symbol:LOC686066 "similar to 60S ribosomal ... 237 5.7e-20 1
RGD|2319618 - symbol:LOC100365156 "ribosomal protein L38-... 237 5.7e-20 1
RGD|2318718 - symbol:LOC100362165 "ribosomal protein L38-... 236 7.2e-20 1
TAIR|locus:2058172 - symbol:AT2G43460 species:3702 "Arabi... 230 3.1e-19 1
TAIR|locus:2097503 - symbol:AT3G59540 species:3702 "Arabi... 230 3.1e-19 1
ASPGD|ASPL0000014916 - symbol:AN11419 species:162425 "Eme... 223 1.7e-18 1
POMBASE|SPBC577.02 - symbol:rpl3801 "60S ribosomal protei... 213 2.0e-17 1
DICTYBASE|DDB_G0268302 - symbol:rpl38 "S60 ribosomal prot... 198 7.7e-16 1
POMBASE|SPAC30D11.12 - symbol:rpl3802 "60S ribosomal prot... 193 2.6e-15 1
SGD|S000004317 - symbol:RPL38 "Ribosomal 60S subunit prot... 185 1.8e-14 1
UNIPROTKB|F1MJ14 - symbol:LOC100336389 "Uncharacterized p... 183 3.0e-14 1
UNIPROTKB|F1PF79 - symbol:RPL38 "Uncharacterized protein"... 177 1.3e-13 1
RGD|1594668 - symbol:LOC690597 "similar to 60S ribosomal ... 160 8.2e-12 1
GENEDB_PFALCIPARUM|PF11_0312 - symbol:PF11_0312 "ribosoma... 144 4.1e-10 1
UNIPROTKB|Q8II62 - symbol:PF11_0312 "60S ribosomal protei... 144 4.1e-10 1
UNIPROTKB|J3KSP2 - symbol:RPL38 "60S ribosomal protein L3... 86 0.00057 1
>UNIPROTKB|E1BU66 [details] [associations]
symbol:RPL38 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0001503
"ossification" evidence=IEA] [GO:0007605 "sensory perception of
sound" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
evidence=IEA] InterPro:IPR002675 Pfam:PF01781 ProDom:PD010361
GO:GO:0006412 GO:GO:0003735 GO:GO:0022625 KO:K02923 OMA:QTKFKVR
PANTHER:PTHR10965 CTD:6169 GeneTree:ENSGT00390000003718
EMBL:AADN02030079 EMBL:AADN02030080 EMBL:AADN02030081
EMBL:AADN02030082 EMBL:AADN02030083 EMBL:AADN02030084
EMBL:AADN02030085 EMBL:AADN02030086 EMBL:AADN02030087
EMBL:AADN02030088 EMBL:AADN02030089 EMBL:AADN02030090
EMBL:AADN02030091 EMBL:AADN02030092 EMBL:AADN02030093
EMBL:AADN02030094 IPI:IPI00580961 RefSeq:XP_001233636.1
UniGene:Gga.6446 ProteinModelPortal:E1BU66 SMR:E1BU66 PRIDE:E1BU66
Ensembl:ENSGALT00000002220 GeneID:771528 KEGG:gga:771528
NextBio:20921728 Uniprot:E1BU66
Length = 70
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 60/78 (76%), Positives = 65/78 (83%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPR+I+EIK+FLL ARRKDAKSV IK KNKD N KFKVRCSR+LYTLVITD EK
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIK----KNKD----NVKFKVRCSRYLYTLVITDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSLPPGL VKE+K
Sbjct: 53 AEKLKQSLPPGLAVKELK 70
>UNIPROTKB|Q32PB9 [details] [associations]
symbol:RPL38 "60S ribosomal protein L38" species:9913 "Bos
taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR002675 Pfam:PF01781 ProDom:PD010361 GO:GO:0006412
GO:GO:0003735 GO:GO:0022625 eggNOG:NOG323549 HOGENOM:HOG000188979
KO:K02923 OMA:QTKFKVR PANTHER:PTHR10965 EMBL:BC108179 EMBL:BC148023
IPI:IPI00690460 RefSeq:NP_001106780.1 UniGene:Bt.7658
ProteinModelPortal:Q32PB9 SMR:Q32PB9 STRING:Q32PB9 PRIDE:Q32PB9
Ensembl:ENSBTAT00000042547 GeneID:615300 KEGG:bta:615300 CTD:6169
GeneTree:ENSGT00390000003718 HOVERGEN:HBG001013 InParanoid:Q32PB9
OrthoDB:EOG4TXBTK NextBio:20899556 Uniprot:Q32PB9
Length = 70
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 60/78 (76%), Positives = 65/78 (83%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPR+I+EIK+FLL ARRKDAKSV IK KNKD N KFKVRCSR+LYTLVITD EK
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIK----KNKD----NVKFKVRCSRYLYTLVITDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSLPPGL VKE+K
Sbjct: 53 AEKLKQSLPPGLAVKELK 70
>UNIPROTKB|P63173 [details] [associations]
symbol:RPL38 "60S ribosomal protein L38" species:9606 "Homo
sapiens" [GO:0001503 "ossification" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0042474 "middle ear
morphogenesis" evidence=IEA] [GO:0006412 "translation"
evidence=NAS;TAS] [GO:0003735 "structural constituent of ribosome"
evidence=NAS] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0003723 "RNA binding" evidence=TAS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006413 "translational initiation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0006415 "translational
termination" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0019058 "viral infectious cycle" evidence=TAS] [GO:0019083
"viral transcription" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR002675
Pfam:PF01781 ProDom:PD010361 Reactome:REACT_116125 GO:GO:0000184
GO:GO:0006413 GO:GO:0003723 GO:GO:0007605 GO:GO:0003735
EMBL:CH471099 GO:GO:0001503 GO:GO:0006415 GO:GO:0042474
GO:GO:0006414 Reactome:REACT_1762 GO:GO:0006614 GO:GO:0022625
GO:GO:0019083 eggNOG:NOG323549 HOGENOM:HOG000188979 KO:K02923
OMA:QTKFKVR PANTHER:PTHR10965 CTD:6169 HOVERGEN:HBG001013
OrthoDB:EOG4TXBTK EMBL:Z26876 EMBL:AK312119 EMBL:BC000603
EMBL:AB007185 IPI:IPI00215790 PIR:S38385 RefSeq:NP_000990.1
RefSeq:NP_001030335.1 UniGene:Hs.380953 UniGene:Hs.629060
ProteinModelPortal:P63173 SMR:P63173 IntAct:P63173
MINT:MINT-5002686 STRING:P63173 PhosphoSite:P63173 DMDM:52783779
PaxDb:P63173 PRIDE:P63173 DNASU:6169 Ensembl:ENST00000311111
Ensembl:ENST00000439590 Ensembl:ENST00000533498 GeneID:6169
KEGG:hsa:6169 UCSC:uc002jjz.3 GeneCards:GC17P072202 HGNC:HGNC:10349
MIM:604182 neXtProt:NX_P63173 PharmGKB:PA34741 InParanoid:P63173
PhylomeDB:P63173 ChiTaRS:RPL38 GenomeRNAi:6169 NextBio:23965
Bgee:P63173 CleanEx:HS_RPL38 Genevestigator:P63173
GermOnline:ENSG00000172809 Uniprot:P63173
Length = 70
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 60/78 (76%), Positives = 65/78 (83%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPR+I+EIK+FLL ARRKDAKSV IK KNKD N KFKVRCSR+LYTLVITD EK
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIK----KNKD----NVKFKVRCSRYLYTLVITDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSLPPGL VKE+K
Sbjct: 53 AEKLKQSLPPGLAVKELK 70
>UNIPROTKB|F2Z568 [details] [associations]
symbol:RPL38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0001503
"ossification" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR002675 Pfam:PF01781 ProDom:PD010361
GO:GO:0006412 GO:GO:0007605 GO:GO:0003735 GO:GO:0001503
GO:GO:0042474 GO:GO:0022625 KO:K02923 OMA:QTKFKVR PANTHER:PTHR10965
GeneTree:ENSGT00390000003718 EMBL:CU929509 RefSeq:XP_003131289.1
RefSeq:XP_003358038.1 ProteinModelPortal:F2Z568 SMR:F2Z568
PRIDE:F2Z568 Ensembl:ENSSSCT00000018768 GeneID:100516393
KEGG:ssc:100516393 Uniprot:F2Z568
Length = 70
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 60/78 (76%), Positives = 65/78 (83%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPR+I+EIK+FLL ARRKDAKSV IK KNKD N KFKVRCSR+LYTLVITD EK
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIK----KNKD----NVKFKVRCSRYLYTLVITDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSLPPGL VKE+K
Sbjct: 53 AEKLKQSLPPGLAVKELK 70
>RGD|1305573 [details] [associations]
symbol:Rpl38 "ribosomal protein L38" species:10116 "Rattus
norvegicus" [GO:0001501 "skeletal system development" evidence=ISO]
[GO:0001503 "ossification" evidence=ISO] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0006417
"regulation of translation" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=ISO] [GO:0033291 "eukaryotic 80S
initiation complex" evidence=ISO] [GO:0034463 "90S preribosome
assembly" evidence=ISO] [GO:0042474 "middle ear morphogenesis"
evidence=ISO] [GO:0048318 "axial mesoderm development"
evidence=ISO] InterPro:IPR002675 Pfam:PF01781 ProDom:PD010361
RGD:1305573 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:NOG323549 HOGENOM:HOG000188979 KO:K02923 OMA:QTKFKVR
PANTHER:PTHR10965 CTD:6169 GeneTree:ENSGT00390000003718
HOVERGEN:HBG001013 OrthoDB:EOG4TXBTK EMBL:X57007 EMBL:BC101933
IPI:IPI00390823 PIR:S15658 RefSeq:NP_001071060.1
RefSeq:XP_001063134.1 RefSeq:XP_001065954.1 RefSeq:XP_001074532.1
RefSeq:XP_002726074.1 UniGene:Rn.129626 ProteinModelPortal:P63174
SMR:P63174 PRIDE:P63174 Ensembl:ENSRNOT00000030800
Ensembl:ENSRNOT00000042661 Ensembl:ENSRNOT00000043427
Ensembl:ENSRNOT00000044141 Ensembl:ENSRNOT00000046518
Ensembl:ENSRNOT00000050489 GeneID:682793 GeneID:685963
GeneID:689284 GeneID:690468 KEGG:rno:682793 KEGG:rno:685963
KEGG:rno:689284 KEGG:rno:690468 InParanoid:P63174 NextBio:723734
Genevestigator:P63174 GermOnline:ENSRNOG00000029377
GermOnline:ENSRNOG00000030747 GermOnline:ENSRNOG00000031332
GermOnline:ENSRNOG00000031798 GermOnline:ENSRNOG00000033686
GermOnline:ENSRNOG00000036729 Uniprot:P63174
Length = 70
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 60/78 (76%), Positives = 65/78 (83%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPR+I+EIK+FLL ARRKDAKSV IK KNKD N KFKVRCSR+LYTLVITD EK
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIK----KNKD----NVKFKVRCSRYLYTLVITDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSLPPGL VKE+K
Sbjct: 53 AEKLKQSLPPGLAVKELK 70
>MGI|MGI:1914921 [details] [associations]
symbol:Rpl38 "ribosomal protein L38" species:10090 "Mus
musculus" [GO:0001501 "skeletal system development"
evidence=IMP;TAS] [GO:0001503 "ossification" evidence=IMP]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IMP] [GO:0007605 "sensory perception of
sound" evidence=IMP] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0033291 "eukaryotic 80S initiation complex"
evidence=IDA] [GO:0034463 "90S preribosome assembly" evidence=IDA]
[GO:0042474 "middle ear morphogenesis" evidence=IMP] [GO:0048318
"axial mesoderm development" evidence=IMP] InterPro:IPR002675
Pfam:PF01781 ProDom:PD010361 MGI:MGI:1914921 GO:GO:0006417
GO:GO:0006412 GO:GO:0001501 GO:GO:0007605 GO:GO:0003735
GO:GO:0001503 GO:GO:0042474 GO:GO:0048318 GO:GO:0022625
eggNOG:NOG323549 HOGENOM:HOG000188979 KO:K02923 OMA:QTKFKVR
PANTHER:PTHR10965 CTD:6169 GeneTree:ENSGT00390000003718
HOVERGEN:HBG001013 OrthoDB:EOG4TXBTK EMBL:AB037665 EMBL:AK002659
EMBL:AK010277 EMBL:AK010518 EMBL:AK012391 EMBL:BC055346
IPI:IPI00331121 RefSeq:NP_001041522.1 RefSeq:NP_001041523.1
RefSeq:NP_075861.1 UniGene:Mm.238817 UniGene:Mm.371629
ProteinModelPortal:Q9JJI8 SMR:Q9JJI8 IntAct:Q9JJI8 STRING:Q9JJI8
PhosphoSite:Q9JJI8 PaxDb:Q9JJI8 PRIDE:Q9JJI8
Ensembl:ENSMUST00000077915 Ensembl:ENSMUST00000082092
Ensembl:ENSMUST00000106599 Ensembl:ENSMUST00000106602 GeneID:67671
KEGG:mmu:67671 InParanoid:Q9JJI8 NextBio:325203 Bgee:Q9JJI8
CleanEx:MM_RPL38 Genevestigator:Q9JJI8
GermOnline:ENSMUSG00000057322 GermOnline:ENSMUSG00000064163
GO:GO:0033291 GO:GO:0034463 Uniprot:Q9JJI8
Length = 70
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 59/78 (75%), Positives = 65/78 (83%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPR+I+EIK+FLL ARRKDAKSV IK KNKD N KFKVRCSR+LYTLVITD EK
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIK----KNKD----NVKFKVRCSRYLYTLVITDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSLPPGL VK++K
Sbjct: 53 AEKLKQSLPPGLAVKDLK 70
>FB|FBgn0040007 [details] [associations]
symbol:RpL38 "Ribosomal protein L38" species:7227 "Drosophila
melanogaster" [GO:0006412 "translation" evidence=ISS] [GO:0003735
"structural constituent of ribosome" evidence=ISS;IDA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS] [GO:0005840
"ribosome" evidence=IDA] InterPro:IPR002675 Pfam:PF01781
ProDom:PD010361 EMBL:AE013599 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:NOG323549 KO:K02923 OMA:QTKFKVR
PANTHER:PTHR10965 CTD:6169 GeneTree:ENSGT00390000003718
EMBL:AY075491 RefSeq:NP_001036440.1 UniGene:Dm.5474
ProteinModelPortal:Q9W5N2 SMR:Q9W5N2 IntAct:Q9W5N2 MINT:MINT-985173
STRING:Q9W5N2 PaxDb:Q9W5N2 PRIDE:Q9W5N2 EnsemblMetazoa:FBtr0111120
GeneID:3355144 KEGG:dme:Dmel_CG18001 FlyBase:FBgn0040007
InParanoid:Q9W5N2 OrthoDB:EOG4DZ0C0 PhylomeDB:Q9W5N2
GenomeRNAi:3355144 NextBio:850856 Bgee:Q9W5N2 Uniprot:Q9W5N2
Length = 70
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 54/78 (69%), Positives = 64/78 (82%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPREIKE+K+FL KARR DA++V IK+N P NTKFK+RCSRFLYTLV+ D EK
Sbjct: 1 MPREIKEVKDFLNKARRSDARAVKIKKN--------PTNTKFKIRCSRFLYTLVVQDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
A+K+KQSLPPGLQVKE+K
Sbjct: 53 ADKIKQSLPPGLQVKEVK 70
>UNIPROTKB|Q6XIM7 [details] [associations]
symbol:RpL38 "60S ribosomal protein L38" species:7245
"Drosophila yakuba" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002675 Pfam:PF01781
ProDom:PD010361 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
PANTHER:PTHR10965 EMBL:AY231803 EMBL:AY231997
ProteinModelPortal:Q6XIM7 SMR:Q6XIM7 FlyBase:FBgn0068372
Uniprot:Q6XIM7
Length = 70
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 54/78 (69%), Positives = 64/78 (82%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPREIKE+K+FL KARR DA++V IK+N P NTKFK+RCSRFLYTLV+ D EK
Sbjct: 1 MPREIKEVKDFLNKARRSDARAVKIKKN--------PTNTKFKIRCSRFLYTLVVQDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
A+K+KQSLPPGLQVKE+K
Sbjct: 53 ADKIKQSLPPGLQVKEVK 70
>RGD|1561636 [details] [associations]
symbol:RGD1561636 "similar to 60S ribosomal protein L38"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR002675 Pfam:PF01781 ProDom:PD010361 RGD:1561636
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR10965
GeneTree:ENSGT00390000003718 OrthoDB:EOG4TXBTK OMA:KFLLTAR
IPI:IPI00562918 RefSeq:XP_001065958.1 RefSeq:XP_578241.2
Ensembl:ENSRNOT00000049811 GeneID:502741 KEGG:rno:502741
UCSC:RGD:1561636 CTD:502741 NextBio:712324 Uniprot:D4AD70
Length = 70
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 59/78 (75%), Positives = 64/78 (82%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPR+I+EIK+FLL ARRKDAKSV IK KNKD N KFKVRCSR+LYTLVITD EK
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIK----KNKD----NVKFKVRCSRYLYTLVITDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
EKLKQSLPPGL VKE+K
Sbjct: 53 VEKLKQSLPPGLAVKELK 70
>WB|WBGene00004452 [details] [associations]
symbol:rpl-38 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR002675 Pfam:PF01781 ProDom:PD010361 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0006412 GO:GO:0005840
GO:GO:0040035 GO:GO:0003735 EMBL:Z81463 eggNOG:NOG323549
HOGENOM:HOG000188979 KO:K02923 OMA:QTKFKVR PANTHER:PTHR10965
GeneTree:ENSGT00390000003718 PIR:T18996 RefSeq:NP_506860.1
ProteinModelPortal:O17570 SMR:O17570 IntAct:O17570 STRING:O17570
PaxDb:O17570 EnsemblMetazoa:C06B8.8.1 EnsemblMetazoa:C06B8.8.2
EnsemblMetazoa:C06B8.8.3 EnsemblMetazoa:C06B8.8.4
EnsemblMetazoa:C06B8.8.5 EnsemblMetazoa:C06B8.8.6 GeneID:180044
KEGG:cel:CELE_C06B8.8 UCSC:C06B8.8.1 CTD:180044 WormBase:C06B8.8
InParanoid:O17570 NextBio:907874 Uniprot:O17570
Length = 70
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 54/78 (69%), Positives = 65/78 (83%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MP+EIKEIK+FL+KARRKDAKSV IK+N +NTKFKVRC+ +LYTLV+ D +K
Sbjct: 1 MPKEIKEIKDFLVKARRKDAKSVKIKKN--------SNNTKFKVRCASYLYTLVVADKDK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSLPPG+QVKE+K
Sbjct: 53 AEKLKQSLPPGIQVKELK 70
>RGD|1592976 [details] [associations]
symbol:LOC680353 "similar to 60S ribosomal protein L38"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR002675 Pfam:PF01781 ProDom:PD010361 RGD:1592976
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR10965
GeneTree:ENSGT00390000003718 OrthoDB:EOG4TXBTK IPI:IPI00394050
RefSeq:XP_001056813.1 RefSeq:XP_002727686.1 PRIDE:D3ZZH2
Ensembl:ENSRNOT00000048963 GeneID:680353 KEGG:rno:680353
UCSC:RGD:1592976 OMA:AQRKDAK NextBio:718523 Uniprot:D3ZZH2
Length = 70
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 56/78 (71%), Positives = 64/78 (82%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MP++I+EIK+FLL A+RKDAKSV IK+N DN KFKVRCSR+LYTLVITD EK
Sbjct: 1 MPQKIEEIKDFLLTAQRKDAKSVKIKKNT--------DNVKFKVRCSRYLYTLVITDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSLPPGL VKE+K
Sbjct: 53 AEKLKQSLPPGLAVKELK 70
>RGD|1595599 [details] [associations]
symbol:LOC678816 "similar to 60S ribosomal protein L38"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR002675 Pfam:PF01781 ProDom:PD010361 RGD:1595599
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR10965
GeneTree:ENSGT00390000003718 OrthoDB:EOG4TXBTK IPI:IPI00370121
RefSeq:XP_001057501.1 RefSeq:XP_003753116.1
Ensembl:ENSRNOT00000043108 GeneID:680512 KEGG:rno:680512
OMA:AWGKDAK NextBio:715183 Uniprot:D4A862
Length = 70
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 57/78 (73%), Positives = 62/78 (79%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPR+I+EIK+FLL A KDAKSV IK KNKD N KFKVRCSR+LYTLVITD EK
Sbjct: 1 MPRKIEEIKDFLLTAWGKDAKSVKIK----KNKD----NVKFKVRCSRYLYTLVITDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQ LPPGL VKE+K
Sbjct: 53 AEKLKQFLPPGLAVKELK 70
>UNIPROTKB|J3QL01 [details] [associations]
symbol:RPL38 "60S ribosomal protein L38" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR002675 Pfam:PF01781
ProDom:PD010361 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
PANTHER:PTHR10965 HGNC:HGNC:10349 ChiTaRS:RPL38 EMBL:AC100786
ProteinModelPortal:J3QL01 Ensembl:ENST00000584577 Uniprot:J3QL01
Length = 67
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 58/78 (74%), Positives = 63/78 (80%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPR+I+EIK+FLL ARRKDAKSV IK KNKD N KFKVRCSR+LYTLVITD EK
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIK----KNKD----NVKFKVRCSRYLYTLVITDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSLPP VKE+K
Sbjct: 53 AEKLKQSLPP---VKELK 67
>UNIPROTKB|J3KT73 [details] [associations]
symbol:RPL38 "60S ribosomal protein L38" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR002675 Pfam:PF01781
ProDom:PD010361 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
PANTHER:PTHR10965 HGNC:HGNC:10349 ChiTaRS:RPL38 EMBL:AC100786
ProteinModelPortal:J3KT73 Ensembl:ENST00000534490 Uniprot:J3KT73
Length = 64
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 55/71 (77%), Positives = 59/71 (83%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPR+I+EIK+FLL ARRKDAKSV IK KNKD N KFKVRCSR+LYTLVITD EK
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIK----KNKD----NVKFKVRCSRYLYTLVITDKEK 52
Query: 61 AEKLKQSLPPG 71
AEKLKQSLPPG
Sbjct: 53 AEKLKQSLPPG 63
>UNIPROTKB|G3MY09 [details] [associations]
symbol:LOC100297522 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002675 Pfam:PF01781
ProDom:PD010361 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
PANTHER:PTHR10965 OMA:CKTEEIN GeneTree:ENSGT00390000003718
EMBL:DAAA02003177 Ensembl:ENSBTAT00000066329 Uniprot:G3MY09
Length = 70
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 55/78 (70%), Positives = 61/78 (78%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
+P + +EI +FLL AR KDAKSV IK KNKD N KFKVRCSR+LYTLVITD EK
Sbjct: 1 IPCKTEEINDFLLTARGKDAKSVKIK----KNKD----NVKFKVRCSRYLYTLVITDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSLPPGL VKE+K
Sbjct: 53 AEKLKQSLPPGLAVKELK 70
>RGD|1586630 [details] [associations]
symbol:LOC686066 "similar to 60S ribosomal protein L38"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR002675 Pfam:PF01781 ProDom:PD010361 RGD:1586630
RGD:2319618 GO:GO:0006412 GO:GO:0005840 GO:GO:0007605 GO:GO:0003735
GO:GO:0001503 GO:GO:0042474 PANTHER:PTHR10965
GeneTree:ENSGT00390000003718 OrthoDB:EOG4TXBTK EMBL:AC115341
IPI:IPI00389722 RefSeq:XP_001066392.1 RefSeq:XP_003753740.1
Ensembl:ENSRNOT00000040570 GeneID:686066 KEGG:rno:686066
UCSC:RGD:1586630 NextBio:731076 Uniprot:D3ZW57
Length = 68
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 54/78 (69%), Positives = 61/78 (78%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPR+I+EIK+FLL AR+KDA SV IK KNK N KFKV CSR+LYTLVITDNEK
Sbjct: 1 MPRKIEEIKDFLLTARQKDATSVKIK----KNKG----NVKFKVHCSRYLYTLVITDNEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
K+KQSLPPGL VKE+K
Sbjct: 53 --KMKQSLPPGLAVKELK 68
>RGD|2319618 [details] [associations]
symbol:LOC100365156 "ribosomal protein L38-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR002675
Pfam:PF01781 ProDom:PD010361 RGD:1586630 RGD:2319618 GO:GO:0006412
GO:GO:0005840 GO:GO:0007605 GO:GO:0003735 GO:GO:0001503
GO:GO:0042474 PANTHER:PTHR10965 GeneTree:ENSGT00390000003718
OrthoDB:EOG4TXBTK EMBL:AC115341 IPI:IPI00389722
RefSeq:XP_001066392.1 RefSeq:XP_003753740.1
Ensembl:ENSRNOT00000040570 GeneID:686066 KEGG:rno:686066
UCSC:RGD:1586630 NextBio:731076 Uniprot:D3ZW57
Length = 68
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 54/78 (69%), Positives = 61/78 (78%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPR+I+EIK+FLL AR+KDA SV IK KNK N KFKV CSR+LYTLVITDNEK
Sbjct: 1 MPRKIEEIKDFLLTARQKDATSVKIK----KNKG----NVKFKVHCSRYLYTLVITDNEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
K+KQSLPPGL VKE+K
Sbjct: 53 --KMKQSLPPGLAVKELK 68
>RGD|2318718 [details] [associations]
symbol:LOC100362165 "ribosomal protein L38-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR002675
Pfam:PF01781 ProDom:PD010361 RGD:2318718 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR10965 OrthoDB:EOG4TXBTK
IPI:IPI00567769 Ensembl:ENSRNOT00000043426 OMA:KSTTRAD
Uniprot:D3ZVH1
Length = 70
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 51/78 (65%), Positives = 62/78 (79%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MP++I+EIK+FLL A +KDAK++ IK KNKD N KFK+ CSR+LYTLV+TD EK
Sbjct: 1 MPQKIEEIKDFLLTAWQKDAKTLKIK----KNKD----NVKFKIHCSRYLYTLVVTDKEK 52
Query: 61 AEKLKQSLPPGLQVKEIK 78
AEKLKQSL PGL VKE+K
Sbjct: 53 AEKLKQSLLPGLAVKELK 70
>TAIR|locus:2058172 [details] [associations]
symbol:AT2G43460 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
InterPro:IPR002675 Pfam:PF01781 ProDom:PD010361
EnsemblPlants:AT2G43460.1 EnsemblPlants:AT3G59540.1 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006412 GO:GO:0003735 EMBL:AC002335 EMBL:AL138659
GO:GO:0022625 eggNOG:NOG323549 HOGENOM:HOG000188979 KO:K02923
OMA:QTKFKVR PANTHER:PTHR10965 EMBL:AF361841 EMBL:BT000853
EMBL:BT025016 EMBL:AY088307 IPI:IPI00534344 PIR:D84866 PIR:T49295
RefSeq:NP_181874.1 RefSeq:NP_191513.1 UniGene:At.12192
UniGene:At.28719 UniGene:At.67039 ProteinModelPortal:O22860
SMR:O22860 STRING:O22860 PaxDb:O22860 PRIDE:O22860 GeneID:818947
GeneID:825123 KEGG:ath:AT2G43460 KEGG:ath:AT3G59540 GeneFarm:370
GeneFarm:371 TAIR:At2g43460 TAIR:At3g59540 InParanoid:O22860
PhylomeDB:O22860 ProtClustDB:CLSN2683073 Genevestigator:O22860
GermOnline:AT2G43460 Uniprot:O22860
Length = 69
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 50/77 (64%), Positives = 60/77 (77%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MP++I EIK+FLL ARRKDA+SV IKR SK D KFKVRCSR+LYTL + D EK
Sbjct: 1 MPKQIHEIKDFLLTARRKDARSVKIKR--SK------DIVKFKVRCSRYLYTLCVFDQEK 52
Query: 61 AEKLKQSLPPGLQVKEI 77
A+KLKQSLPPGL V+++
Sbjct: 53 ADKLKQSLPPGLSVQDL 69
>TAIR|locus:2097503 [details] [associations]
symbol:AT3G59540 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
InterPro:IPR002675 Pfam:PF01781 ProDom:PD010361
EnsemblPlants:AT2G43460.1 EnsemblPlants:AT3G59540.1 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006412 GO:GO:0003735 EMBL:AC002335 EMBL:AL138659
GO:GO:0022625 eggNOG:NOG323549 HOGENOM:HOG000188979 KO:K02923
OMA:QTKFKVR PANTHER:PTHR10965 EMBL:AF361841 EMBL:BT000853
EMBL:BT025016 EMBL:AY088307 IPI:IPI00534344 PIR:D84866 PIR:T49295
RefSeq:NP_181874.1 RefSeq:NP_191513.1 UniGene:At.12192
UniGene:At.28719 UniGene:At.67039 ProteinModelPortal:O22860
SMR:O22860 STRING:O22860 PaxDb:O22860 PRIDE:O22860 GeneID:818947
GeneID:825123 KEGG:ath:AT2G43460 KEGG:ath:AT3G59540 GeneFarm:370
GeneFarm:371 TAIR:At2g43460 TAIR:At3g59540 InParanoid:O22860
PhylomeDB:O22860 ProtClustDB:CLSN2683073 Genevestigator:O22860
GermOnline:AT2G43460 Uniprot:O22860
Length = 69
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 50/77 (64%), Positives = 60/77 (77%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MP++I EIK+FLL ARRKDA+SV IKR SK D KFKVRCSR+LYTL + D EK
Sbjct: 1 MPKQIHEIKDFLLTARRKDARSVKIKR--SK------DIVKFKVRCSRYLYTLCVFDQEK 52
Query: 61 AEKLKQSLPPGLQVKEI 77
A+KLKQSLPPGL V+++
Sbjct: 53 ADKLKQSLPPGLSVQDL 69
>ASPGD|ASPL0000014916 [details] [associations]
symbol:AN11419 species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR002675 Pfam:PF01781 ProDom:PD010361 GO:GO:0006412
GO:GO:0005840 EMBL:BN001302 GO:GO:0003735 HOGENOM:HOG000188979
OMA:QTKFKVR PANTHER:PTHR10965 EnsemblFungi:CADANIAT00004840
Uniprot:C8V6G7
Length = 80
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 45/77 (58%), Positives = 58/77 (75%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPRE+ +IK+F+ ARRKDA S IKRN +K KFKVRCSRF+YTLV+ D++K
Sbjct: 1 MPREVSDIKQFIELARRKDASSARIKRN------RKTQQIKFKVRCSRFVYTLVLKDSDK 54
Query: 61 AEKLKQSLPPGLQVKEI 77
A+KLKQSLPP L+V ++
Sbjct: 55 ADKLKQSLPPALKVVDV 71
>POMBASE|SPBC577.02 [details] [associations]
symbol:rpl3801 "60S ribosomal protein L38 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] InterPro:IPR002675
Pfam:PF01781 ProDom:PD010361 PomBase:SPBC577.02 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181 GO:GO:0022625
EMBL:AB006199 PIR:T40546 PIR:T43273 RefSeq:NP_595300.1
MINT:MINT-4708600 STRING:Q9USR7 PRIDE:Q9USR7
EnsemblFungi:SPBC577.02.1 GeneID:2540910 KEGG:spo:SPBC577.02
eggNOG:NOG323549 HOGENOM:HOG000188979 KO:K02923 OMA:QTKFKVR
OrthoDB:EOG4TB7N3 NextBio:20802025 PANTHER:PTHR10965 Uniprot:Q9USR7
Length = 74
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 46/77 (59%), Positives = 57/77 (74%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPR+I +IK+FL ARRKDA S IK+N NKD KFK+RCS++LYTLV+ D +K
Sbjct: 1 MPRQISDIKQFLEIARRKDATSARIKKNT--NKD-----VKFKLRCSKYLYTLVVADAKK 53
Query: 61 AEKLKQSLPPGLQVKEI 77
AEKL+QSLPP L V E+
Sbjct: 54 AEKLRQSLPPDLTVTEV 70
>DICTYBASE|DDB_G0268302 [details] [associations]
symbol:rpl38 "S60 ribosomal protein L38"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA;ISS] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR002675 Pfam:PF01781 ProDom:PD010361
dictyBase:DDB_G0268302 GenomeReviews:CM000150_GR GO:GO:0006412
EMBL:AAFI02000003 GO:GO:0005840 GO:GO:0003735 eggNOG:NOG323549
KO:K02923 OMA:QTKFKVR PANTHER:PTHR10965 RefSeq:XP_647187.1
STRING:Q55GJ7 EnsemblProtists:DDB0231155 GeneID:8615991
KEGG:ddi:DDB_G0268302 ProtClustDB:CLSZ2431511 Uniprot:Q55GJ7
Length = 75
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 41/77 (53%), Positives = 53/77 (68%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPREI+EIK+FL+ R KDAK + IK+ + KN TKFKVRC R+LYTL + DN K
Sbjct: 1 MPREIREIKDFLVTVRNKDAKEIRIKK-VGKNL------TKFKVRCGRYLYTLRVADNAK 53
Query: 61 AEKLKQSLPPGLQVKEI 77
A KL Q+LPP + ++
Sbjct: 54 AAKLMQTLPPSIPTVQV 70
>POMBASE|SPAC30D11.12 [details] [associations]
symbol:rpl3802 "60S ribosomal protein L38 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] InterPro:IPR002675
Pfam:PF01781 ProDom:PD010361 PomBase:SPAC30D11.12 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003735 GO:GO:0002181 GO:GO:0022625
eggNOG:NOG323549 HOGENOM:HOG000188979 KO:K02923 OrthoDB:EOG4TB7N3
PANTHER:PTHR10965 PIR:S62570 RefSeq:NP_593205.1 IntAct:Q09900
STRING:Q09900 PRIDE:Q09900 EnsemblFungi:SPAC30D11.12.1
GeneID:2541705 KEGG:spo:SPAC30D11.12 OMA:CKTEEIN NextBio:20802797
Uniprot:Q09900
Length = 74
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 42/77 (54%), Positives = 54/77 (70%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MPR++ +IK FL A R DA S +K+N +NK KFK+RCSR+LYTLV+ D +K
Sbjct: 1 MPRQVTDIKLFLQLAHRGDATSARVKKN--QNKA-----VKFKLRCSRYLYTLVVADAKK 53
Query: 61 AEKLKQSLPPGLQVKEI 77
AEKL+QSLPP L V E+
Sbjct: 54 AEKLRQSLPPALTVTEV 70
>SGD|S000004317 [details] [associations]
symbol:RPL38 "Ribosomal 60S subunit protein L38" species:4932
"Saccharomyces cerevisiae" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;TAS] [GO:0005840 "ribosome" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0002181 "cytoplasmic
translation" evidence=TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR002675 Pfam:PF01781
ProDom:PD010361 SGD:S000004317 EMBL:BK006945 GO:GO:0003735
GO:GO:0002181 PDB:4B6A PDBsum:4B6A EMBL:U20618 GO:GO:0022625
PDB:3IZS PDB:3U5E PDB:3U5I PDBsum:3IZS PDBsum:3U5E PDBsum:3U5I
eggNOG:NOG323549 HOGENOM:HOG000188979 KO:K02923 OMA:QTKFKVR
OrthoDB:EOG4TB7N3 PANTHER:PTHR10965 GeneTree:ENSGT00390000003718
PIR:S53402 RefSeq:NP_013429.1 ProteinModelPortal:P49167 SMR:P49167
DIP:DIP-3950N IntAct:P49167 MINT:MINT-477400 STRING:P49167
PaxDb:P49167 PeptideAtlas:P49167 EnsemblFungi:YLR325C GeneID:851035
KEGG:sce:YLR325C CYGD:YLR325c NextBio:967628 Genevestigator:P49167
GermOnline:YLR325C Uniprot:P49167
Length = 78
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 44/78 (56%), Positives = 51/78 (65%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKP-DNTKFKVRCSRFLYTLVITDNE 59
M REI +IK+FL RR D K+ T+K N NK KP TKFKVR S LYTLVI D
Sbjct: 1 MAREITDIKQFLELTRRADVKTATVKINKKLNKAGKPFRQTKFKVRGSSSLYTLVINDAG 60
Query: 60 KAEKLKQSLPPGLQVKEI 77
KA+KL QSLPP L+V +
Sbjct: 61 KAKKLIQSLPPTLKVNRL 78
>UNIPROTKB|F1MJ14 [details] [associations]
symbol:LOC100336389 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002675 Pfam:PF01781
ProDom:PD010361 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
PANTHER:PTHR10965 GeneTree:ENSGT00390000003718 EMBL:DAAA02015037
IPI:IPI00697077 Ensembl:ENSBTAT00000037488 Uniprot:F1MJ14
Length = 70
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 45/77 (58%), Positives = 52/77 (67%)
Query: 2 PREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEKA 61
PR+ +EIK LL A RK A+SV IK+ SK D+ KFK R SR LYTLVITD EKA
Sbjct: 2 PRKTEEIKSLLLTAGRKHARSVKIKK--SK------DDVKFKARSSRCLYTLVITDKEKA 53
Query: 62 EKLKQSLPPGLQVKEIK 78
E +SLPPGL KE+K
Sbjct: 54 ETWTRSLPPGLAEKELK 70
>UNIPROTKB|F1PF79 [details] [associations]
symbol:RPL38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002675 Pfam:PF01781
ProDom:PD010361 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
PANTHER:PTHR10965 OMA:CKTEEIN GeneTree:ENSGT00390000003718
EMBL:AAEX03005687 Ensembl:ENSCAFT00000038200 Uniprot:F1PF79
Length = 70
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 40/69 (57%), Positives = 50/69 (72%)
Query: 2 PREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEKA 61
P +I+EIK+ LL AR+KDA+ + IK+N DN KFKV+CSR+LYT+VI EKA
Sbjct: 3 PCKIEEIKDSLLTARQKDAEYIKIKKN--------RDNVKFKVQCSRYLYTIVIIYKEKA 54
Query: 62 EKLKQSLPP 70
EKLKQSL P
Sbjct: 55 EKLKQSLSP 63
>RGD|1594668 [details] [associations]
symbol:LOC690597 "similar to 60S ribosomal protein L38"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR002675 Pfam:PF01781 ProDom:PD010361 RGD:1594668
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR10965
OrthoDB:EOG4TXBTK IPI:IPI00214750 Ensembl:ENSRNOT00000023369
Uniprot:D4A7E3
Length = 62
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 39/71 (54%), Positives = 49/71 (69%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MP + +EIK+ LL A+ KD KSV IK KNKD N K +V CSR+ Y+LV+TD EK
Sbjct: 1 MPWKTEEIKDILLSAQGKDTKSVEIK----KNKD----NVKLEVCCSRYHYSLVVTDKEK 52
Query: 61 AEKLKQSLPPG 71
AEK ++S PPG
Sbjct: 53 AEK-QRSPPPG 62
>GENEDB_PFALCIPARUM|PF11_0312 [details] [associations]
symbol:PF11_0312 "ribosomal protein L38e"
species:5833 "Plasmodium falciparum" [GO:0022625 "cytosolic large
ribosomal subunit" evidence=ISS] InterPro:IPR002675 Pfam:PF01781
ProDom:PD010361 GO:GO:0006412 GO:GO:0003735 EMBL:AE014186
GO:GO:0022625 HOGENOM:HOG000188979 KO:K02923 PANTHER:PTHR10965
RefSeq:XP_001347983.1 ProteinModelPortal:Q8II62 PRIDE:Q8II62
EnsemblProtists:PF11_0312:mRNA GeneID:810859 KEGG:pfa:PF11_0312
EuPathDB:PlasmoDB:PF3D7_1130100 OMA:KFLLTAR ProtClustDB:CLSZ2433222
Uniprot:Q8II62
Length = 87
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MP++I +I++FL +R+ D +V I + SK K K TK K+R ++LYT+V D +K
Sbjct: 1 MPKQITDIRKFLKISRKPDTTAVIIMKKKSKTK-KNTVITKLKLRTKKYLYTMVFADRKK 59
Query: 61 AEKLKQSLPPGLQ 73
AE+++ SL P L+
Sbjct: 60 AERIENSLLPSLK 72
>UNIPROTKB|Q8II62 [details] [associations]
symbol:PF11_0312 "60S ribosomal protein L38e, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISS] InterPro:IPR002675
Pfam:PF01781 ProDom:PD010361 GO:GO:0006412 GO:GO:0003735
EMBL:AE014186 GO:GO:0022625 HOGENOM:HOG000188979 KO:K02923
PANTHER:PTHR10965 RefSeq:XP_001347983.1 ProteinModelPortal:Q8II62
PRIDE:Q8II62 EnsemblProtists:PF11_0312:mRNA GeneID:810859
KEGG:pfa:PF11_0312 EuPathDB:PlasmoDB:PF3D7_1130100 OMA:KFLLTAR
ProtClustDB:CLSZ2433222 Uniprot:Q8II62
Length = 87
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 MPREIKEIKEFLLKARRKDAKSVTIKRNISKNKDKKPDNTKFKVRCSRFLYTLVITDNEK 60
MP++I +I++FL +R+ D +V I + SK K K TK K+R ++LYT+V D +K
Sbjct: 1 MPKQITDIRKFLKISRKPDTTAVIIMKKKSKTK-KNTVITKLKLRTKKYLYTMVFADRKK 59
Query: 61 AEKLKQSLPPGLQ 73
AE+++ SL P L+
Sbjct: 60 AERIENSLLPSLK 72
>UNIPROTKB|J3KSP2 [details] [associations]
symbol:RPL38 "60S ribosomal protein L38" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0001503 "ossification" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0042474
"middle ear morphogenesis" evidence=IEA] InterPro:IPR002675
Pfam:PF01781 ProDom:PD010361 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 HGNC:HGNC:10349 ChiTaRS:RPL38 EMBL:AC100786
Ensembl:ENST00000528433 Uniprot:J3KSP2
Length = 21
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 17/21 (80%), Positives = 20/21 (95%)
Query: 1 MPREIKEIKEFLLKARRKDAK 21
MPR+I+EIK+FLL ARRKDAK
Sbjct: 1 MPRKIEEIKDFLLTARRKDAK 21
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.132 0.355 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 78 78 0.00091 102 3 11 23 0.41 29
29 0.38 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 382 (41 KB)
Total size of DFA: 69 KB (2063 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.13u 0.07s 11.20t Elapsed: 00:00:09
Total cpu time: 11.13u 0.07s 11.20t Elapsed: 00:00:10
Start: Thu Aug 15 14:50:50 2013 End: Thu Aug 15 14:51:00 2013