BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11277
(66 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2IKC|A Chain A, Crystal Structure Of Sheep Lactoperoxidase At 3.25 A
Resolution Reveals The Binding Sites For Formate
pdb|2IKC|B Chain B, Crystal Structure Of Sheep Lactoperoxidase At 3.25 A
Resolution Reveals The Binding Sites For Formate
Length = 595
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 34/40 (85%)
Query: 27 MFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
+ A +HT+L+REHNRLA +L ++NPHW+ E+L+Q AR+I+
Sbjct: 261 LLATVHTLLLREHNRLARELKRLNPHWDGEKLYQEARKIL 300
>pdb|3R5Q|A Chain A, Crystal Structure Of Sheep Lactoperoxidase In Complex With
Tetrahydrofuran At 2.7 A Resolution
Length = 595
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 34/40 (85%)
Query: 27 MFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
+ A +HT+L+REHNRLA +L ++NPHW+ E+L+Q AR+I+
Sbjct: 261 LLATVHTLLLREHNRLARELKRLNPHWDGEKLYQEARKIL 300
>pdb|2R5L|A Chain A, Crystal Structure Of Lactoperoxidase At 2.4a Resolution
pdb|3N8F|A Chain A, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Thiocyanate At 3.2 A Resolution
pdb|3N8F|B Chain B, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Thiocyanate At 3.2 A Resolution
pdb|3NIU|A Chain A, Crystal Structure Of The Complex Of Dimeric Goat
Lactoperoxidase With Diethylene Glycol At 2.9 A
Resolution
pdb|3NIU|B Chain B, Crystal Structure Of The Complex Of Dimeric Goat
Lactoperoxidase With Diethylene Glycol At 2.9 A
Resolution
pdb|3NAK|A Chain A, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Hypothiocyanite At 3.3 A Resolution
pdb|3NAK|B Chain B, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Hypothiocyanite At 3.3 A Resolution
pdb|3QF1|A Chain A, Crystal Structure Of The Complex Of Caprine
Lactoperoxidase With Diethylenediamine At 2.6a
Resolution
pdb|3RKE|A Chain A, Crystal Structure Of Goat Lactoperoxidase Complexed With A
Tightly Bound Inhibitor, 4-Aminophenyl-4h-Imidazole-1-Yl
Methanone At 2.3 A Resolution
pdb|3R55|A Chain A, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Pyrazinamide At 2.1 A Resolution
pdb|3SXV|A Chain A, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Amitrole At 2.1 A Resolution
Length = 595
Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 33/40 (82%)
Query: 27 MFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
+ A +HT+L+REHNRLA +L ++NPHW+ E L+Q AR+I+
Sbjct: 261 LLATVHTLLLREHNRLARELKRLNPHWDGEMLYQEARKIL 300
>pdb|2E9E|A Chain A, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Nitrate At 3.25 A Resolution
pdb|2E9E|B Chain B, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Nitrate At 3.25 A Resolution
pdb|2OJV|A Chain A, Crystal Structure Of A Ternary Complex Of Goat
Lactoperoxidase With Cyanide And Iodide Ions At 2.4 A
Resolution
pdb|2EFB|A Chain A, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Phosphate At 2.94 A Resolution
pdb|2EFB|B Chain B, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Phosphate At 2.94 A Resolution
pdb|2EHA|A Chain A, Crystal Structure Of Goat Lactoperoxidase Complexed With
Formate Anion At 3.3 A Resolution
pdb|2EHA|B Chain B, Crystal Structure Of Goat Lactoperoxidase Complexed With
Formate Anion At 3.3 A Resolution
Length = 595
Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 33/40 (82%)
Query: 27 MFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
+ A +HT+L+REHNRLA +L ++NPHW+ E L+Q AR+I+
Sbjct: 261 LLATVHTLLLREHNRLARELKRLNPHWDGEMLYQEARKIL 300
>pdb|3F9P|C Chain C, Crystal Structure Of Myeloperoxidase From Human Leukocytes
pdb|3F9P|D Chain D, Crystal Structure Of Myeloperoxidase From Human Leukocytes
pdb|3ZS0|C Chain C, Human Myeloperoxidase Inactivated By Tx2
pdb|3ZS0|D Chain D, Human Myeloperoxidase Inactivated By Tx2
pdb|3ZS1|C Chain C, Human Myeloperoxidase Inactivated By Tx5
pdb|3ZS1|D Chain D, Human Myeloperoxidase Inactivated By Tx5
Length = 467
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 28 FAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
+MHT+L+REHNRLA +L +NP W+ E+L+Q AR+I+
Sbjct: 134 LTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIV 172
>pdb|1CXP|C Chain C, Cryogenic Crystal Structure Of Human Myeloperoxidase
Isoform C
pdb|1CXP|D Chain D, Cryogenic Crystal Structure Of Human Myeloperoxidase
Isoform C
pdb|1D2V|C Chain C, Crystal Structure Of Bromide-Bound Human Myeloperoxidase
Isoform C At Ph 5.5
pdb|1D2V|D Chain D, Crystal Structure Of Bromide-Bound Human Myeloperoxidase
Isoform C At Ph 5.5
pdb|1D7W|C Chain C, Crystal Structure Of Human Myeloperoxidase Isoform C
Complexed With Cyanide And Bromide At Ph 4.0
pdb|1D7W|D Chain D, Crystal Structure Of Human Myeloperoxidase Isoform C
Complexed With Cyanide And Bromide At Ph 4.0
pdb|1D5L|C Chain C, Crystal Structure Of Cyanide-Bound Human Myeloperoxidase
Isoform C At Ph 5.5
pdb|1D5L|D Chain D, Crystal Structure Of Cyanide-Bound Human Myeloperoxidase
Isoform C At Ph 5.5
pdb|1DNU|C Chain C, Structural Analyses Of Human Myeloperoxidase-Thiocyanate
Complex
pdb|1DNU|D Chain D, Structural Analyses Of Human Myeloperoxidase-Thiocyanate
Complex
pdb|1DNW|C Chain C, Human Myeloperoxidase-Cyanide-Thiocyanate Complex
pdb|1DNW|D Chain D, Human Myeloperoxidase-Cyanide-Thiocyanate Complex
pdb|4DL1|C Chain C, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|D Chain D, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|G Chain G, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|H Chain H, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|K Chain K, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|L Chain L, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|O Chain O, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|P Chain P, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
Length = 466
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 28 FAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
+MHT+L+REHNRLA +L +NP W+ E+L+Q AR+I+
Sbjct: 134 LTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIV 172
>pdb|1MYP|C Chain C, X-Ray Crystal Structure Of Canine Myeloperoxidase At 3
Angstroms Resolution
pdb|1MYP|D Chain D, X-Ray Crystal Structure Of Canine Myeloperoxidase At 3
Angstroms Resolution
pdb|1MHL|C Chain C, Crystal Structure Of Human Myeloperoxidase Isoform C
Crystallized In Space Group P2(1) At Ph 5.5 And 20 Deg C
pdb|1MHL|D Chain D, Crystal Structure Of Human Myeloperoxidase Isoform C
Crystallized In Space Group P2(1) At Ph 5.5 And 20 Deg C
Length = 466
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 28 FAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
+MHT+L+REHNRLA +L +NP W+ E+L+Q AR+I+
Sbjct: 134 LTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIV 172
>pdb|3ERH|A Chain A, First Structural Evidence Of Substrate Specificity In
Mammalian Peroxidases: Crystal Structures Of Substrate
Complexes With Lactoperoxidases From Two Different
Species
pdb|3FAQ|A Chain A, Crystal Struture Of Lactoperoxidase Complex With Cyanide
Length = 595
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 37 REHNRLAEQLVQINPHWNDEQLFQHARRIM 66
REHNRLA +L ++NPHWN E+L+Q AR+I+
Sbjct: 271 REHNRLARELKKLNPHWNGEKLYQEARKIL 300
>pdb|2PT3|A Chain A, Crystal Structure Of Bovine Lactoperoxidase At 2.34 A
Resolution Reveals Multiple Anion Binding Sites
pdb|2PUM|A Chain A, Crystal Structure Of Bovine Lactoperoxidase Complex With
Catechol And Iodide At 2.7 A Resolution
pdb|2QPK|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With Salicylhydroxamic Acid At 2.34 A Resolution
pdb|2QQT|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With Acetyl Salicylic Acid At 2.5 A Resolution
pdb|2QRB|A Chain A, Crystal Structure Of Chloride Saturated Bovine
Lactoperoxidase At 2.5 A Resolution Shows Multiple
Halide Binding Sites
pdb|3BXI|A Chain A, Structure Of The Complex Of Bovine Lactoperoxidase With
Its Catalyzed Product Hypothiocyanate Ion At 2.3a
Resolution
pdb|3ERI|A Chain A, First Structural Evidence Of Substrate Specificity In
Mammalian Peroxidases: Crystal Structures Of Substrate
Complexes With Lactoperoxidases From Two Different
Species
pdb|3GC1|A Chain A, Crystal Structure Of Bovine Lactoperoxidase
pdb|3GCJ|A Chain A, Mode Of Ligand Binding And Assignment Of Subsites In
Mammalian Peroxidases: Crystal Structure Of
Lactoperoxidase Complexes With Acetyl Salycylic Acid,
Salicylhydroxamic Acid And Benzylhydroxamic Acid
pdb|3GCK|A Chain A, Mode Of Ligand Binding And Assignment Of Subsites In
Mammalian Peroxidases: Crystal Structure Of
Lactoperoxidase Complexes With Acetyl Salycylic Acid,
Salicylhydroxamic Acid And Benzylhydroxamic Acid
pdb|3GCL|A Chain A, Mode Of Ligand Binding And Assignment Of Subsites In
Mammalian Peroxidases: Crystal Structure Of
Lactoperoxidase Complexes With Acetyl Salycylic Acid,
Salicylhydroxamic Acid And Benzylhydroxamic Acid
pdb|3I6N|A Chain A, Mode Of Binding Of The Tuberculosis Prodrug Isoniazid To
Peroxidases: Crystal Structure Of Bovine Lactoperoxidase
With Isoniazid At 2.7 Resolution
pdb|3KRQ|A Chain A, Crystal Structure Of The Complex Of Lactoperoxidase With A
Potent Inhibitor Amino-Triazole At 2.2a Resolution
pdb|3NYH|A Chain A, Crystal Structure Of Lactoperoxidase Complexed
Simultaneously With Thiocyanate Ion, Iodide Ion, Bromide
Ion, Chloride Ion Through The Substrate Diffusion
Channel Reveals A Preferential Queue Of The Inorganic
Substrates Towards The Distal Heme Cavity
pdb|3OGW|A Chain A, Structure Of The Complex Of Bovine Lactoperoxidase With
Indomethacin At 1.9a Resolution
pdb|3PY4|A Chain A, Crystal Structure Of Bovine Lactoperoxidase In Complex
With Paracetamol At 2.4a Resolution
pdb|3Q9K|A Chain A, Crystal Structure Of Bovine Lactoperoxidase Complexed With
Phenyl Isothiocyanate At 1.7 A Resolution
pdb|3QL6|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With Nimesulide At 1.7 A Resolution
pdb|3S4F|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With 1h- Pyrazolo[4,3-C] Pyridine At 1.99 A Resolution
pdb|3R4X|A Chain A, Crystal Structure Of Bovine Lactoperoxidase Complexed With
Pyrazine-2- Carboxamide At 2 A Resolution
pdb|3R5O|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With 4- Allyl-2-Methoxyphenol At 2.6 A Resolution
pdb|3TGY|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With Ascorbic Acid At 2.35 A Resolution
pdb|3TUW|A Chain A, Crystal Structure Of Lactoperoxidase Complexed With
Pyrazinamide At 2.2a Resolution
pdb|3UBA|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With P- Hydroxycinnamic Acid At 2.6 A Resolution
pdb|3V6Q|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With Carbon Monoxide At 2.0 A Resolution
pdb|4GM7|A Chain A, Structure Of Cinnamic Acid Bound Bovine Lactoperoxidase At
2.6a Resolution.
pdb|4GN6|A Chain A, Structure Of Paracetamol Bound Bovine Lactoperoxidase At
2.45a Resolution
Length = 595
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 37 REHNRLAEQLVQINPHWNDEQLFQHARRIM 66
REHNRLA +L ++NPHWN E+L+Q AR+I+
Sbjct: 271 REHNRLARELKKLNPHWNGEKLYQEARKIL 300
>pdb|2IPS|A Chain A, Crystal Structure Of A Ternary Complex Of Bovine
Lactoperoxidase With Thiocyanate And Iodide At 3.1 A
Resolution
pdb|2NQX|A Chain A, Crystal Structure Of Bovine Lactoperoxidase With Iodide
Ions At 2.9a Resolution
Length = 595
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 37 REHNRLAEQLVQINPHWNDEQLFQHARRIM 66
REHNRLA +L ++NPHWN E+L+Q AR+I+
Sbjct: 271 REHNRLARELKKLNPHWNGEKLYQEARKIL 300
>pdb|2GJ1|A Chain A, Crystal Structure Of Bovine Lactoperoxidase At 2.3a
Resolution
Length = 583
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 37 REHNRLAEQLVQINPHWNDEQLFQHARRIM 66
REHNRLA +L ++NPHWN E+L+Q AR+I+
Sbjct: 259 REHNRLARELKKLNPHWNGEKLYQEARKIL 288
>pdb|2GJM|A Chain A, Crystal Structure Of Buffalo Lactoperoxidase At 2.75a
Resolution
Length = 583
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 37 REHNRLAEQLVQINPHWNDEQLFQHARRIM 66
REHNRLA +L ++NPHWN E+L+Q AR+I+
Sbjct: 259 REHNRLARELKKLNPHWNGEKLYQEARKIL 288
>pdb|2Z5Z|A Chain A, Crystal Structure Of The Complex Of Buffalo
Lactoperoxidase With Fluoride Ion At 3.5a Resolution
pdb|3FNL|A Chain A, Crystal Structure Of The Complex Of Buffalo
Lactoperoxidase With Salicylhydroxamic Acid At 2.48 A
Resolution
Length = 595
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 17/30 (56%), Positives = 25/30 (83%)
Query: 37 REHNRLAEQLVQINPHWNDEQLFQHARRIM 66
REHNRLA +L ++NP W+ E+L+Q AR+I+
Sbjct: 271 REHNRLARELKKLNPQWDGEKLYQEARKIL 300
>pdb|2O86|A Chain A, Crystal Structure Of A Ternary Complex Of Buffalo
Lactoperoxidase With Nitrate And Iodide At 2.8 A
Resolution
Length = 595
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 17/30 (56%), Positives = 25/30 (83%)
Query: 37 REHNRLAEQLVQINPHWNDEQLFQHARRIM 66
REHNRLA +L ++NP W+ E+L+Q AR+I+
Sbjct: 271 REHNRLARELKKLNPQWDGEKLYQEARKIL 300
>pdb|3RR3|A Chain A, Structure Of (R)-Flurbiprofen Bound To Mcox-2
pdb|3RR3|B Chain B, Structure Of (R)-Flurbiprofen Bound To Mcox-2
pdb|3RR3|C Chain C, Structure Of (R)-Flurbiprofen Bound To Mcox-2
pdb|3RR3|D Chain D, Structure Of (R)-Flurbiprofen Bound To Mcox-2
Length = 560
Score = 45.1 bits (105), Expect = 9e-06, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 33 TILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
TI +REHNR+ + L Q +P W DEQLFQ +R I+
Sbjct: 272 TIWLREHNRVCDILKQEHPEWGDEQLFQTSRLIL 305
>pdb|3MDL|A Chain A, X-Ray Crystal Structure Of 1-Arachidonoyl Glycerol Bound
To The Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3MDL|B Chain B, X-Ray Crystal Structure Of 1-Arachidonoyl Glycerol Bound
To The Cyclooxygenase Channel Of Cyclooxygenase-2
Length = 587
Score = 45.1 bits (105), Expect = 9e-06, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 33 TILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
TI +REHNR+ + L Q +P W DEQLFQ +R I+
Sbjct: 277 TIWLREHNRVCDILKQEHPEWGDEQLFQTSRLIL 310
>pdb|3KRK|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound In The
Cyclooxygenase Channel Of L531f Murine Cox-2
pdb|3KRK|B Chain B, X-Ray Crystal Structure Of Arachidonic Acid Bound In The
Cyclooxygenase Channel Of L531f Murine Cox-2
Length = 591
Score = 45.1 bits (105), Expect = 9e-06, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 33 TILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
TI +REHNR+ + L Q +P W DEQLFQ +R I+
Sbjct: 276 TIWLREHNRVCDILKQEHPEWGDEQLFQTSRLIL 309
>pdb|3HS5|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound To The
Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3HS5|B Chain B, X-Ray Crystal Structure Of Arachidonic Acid Bound To The
Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3HS6|A Chain A, X-Ray Crystal Structure Of Eicosapentaenoic Acid Bound To
The Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3HS6|B Chain B, X-Ray Crystal Structure Of Eicosapentaenoic Acid Bound To
The Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3HS7|A Chain A, X-Ray Crystal Structure Of Docosahexaenoic Acid Bound To
The Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3HS7|B Chain B, X-Ray Crystal Structure Of Docosahexaenoic Acid Bound To
The Cyclooxygenase Channel Of Cyclooxygenase-2
Length = 591
Score = 45.1 bits (105), Expect = 9e-06, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 33 TILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
TI +REHNR+ + L Q +P W DEQLFQ +R I+
Sbjct: 276 TIWLREHNRVCDILKQEHPEWGDEQLFQTSRLIL 309
>pdb|3TZI|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound In The
Cyclooxygenase Channel Of G533v Murine Cox-2
pdb|3TZI|B Chain B, X-Ray Crystal Structure Of Arachidonic Acid Bound In The
Cyclooxygenase Channel Of G533v Murine Cox-2
Length = 593
Score = 45.1 bits (105), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 33 TILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
TI +REHNR+ + L Q +P W DEQLFQ +R I+
Sbjct: 278 TIWLREHNRVCDILKQEHPEWGDEQLFQTSRLIL 311
>pdb|3NT1|A Chain A, High Resolution Structure Of Naproxen:cox-2 Complex.
pdb|3NT1|B Chain B, High Resolution Structure Of Naproxen:cox-2 Complex.
pdb|3NTB|A Chain A, Structure Of 6-Methylthio Naproxen Analog Bound To Mcox-2.
pdb|3NTB|B Chain B, Structure Of 6-Methylthio Naproxen Analog Bound To Mcox-2.
pdb|3NTB|C Chain C, Structure Of 6-Methylthio Naproxen Analog Bound To Mcox-2.
pdb|3NTB|D Chain D, Structure Of 6-Methylthio Naproxen Analog Bound To Mcox-2.
pdb|3LN0|A Chain A, Structure Of Compound 5c-S Bound At The Active Site Of
Cox-2
pdb|3LN0|B Chain B, Structure Of Compound 5c-S Bound At The Active Site Of
Cox-2
pdb|3LN0|C Chain C, Structure Of Compound 5c-S Bound At The Active Site Of
Cox-2
pdb|3LN0|D Chain D, Structure Of Compound 5c-S Bound At The Active Site Of
Cox-2
pdb|3LN1|A Chain A, Structure Of Celecoxib Bound At The Cox-2 Active Site
pdb|3LN1|B Chain B, Structure Of Celecoxib Bound At The Cox-2 Active Site
pdb|3LN1|C Chain C, Structure Of Celecoxib Bound At The Cox-2 Active Site
pdb|3LN1|D Chain D, Structure Of Celecoxib Bound At The Cox-2 Active Site
pdb|3MQE|A Chain A, Structure Of Sc-75416 Bound At The Cox-2 Active Site
pdb|3MQE|B Chain B, Structure Of Sc-75416 Bound At The Cox-2 Active Site
pdb|3MQE|C Chain C, Structure Of Sc-75416 Bound At The Cox-2 Active Site
pdb|3MQE|D Chain D, Structure Of Sc-75416 Bound At The Cox-2 Active Site
pdb|3Q7D|A Chain A, Structure Of (R)-Naproxen Bound To Mcox-2.
pdb|3Q7D|B Chain B, Structure Of (R)-Naproxen Bound To Mcox-2
Length = 587
Score = 45.1 bits (105), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 33 TILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
TI +REHNR+ + L Q +P W DEQLFQ +R I+
Sbjct: 272 TIWLREHNRVCDILKQEHPEWGDEQLFQTSRLIL 305
>pdb|3QH0|A Chain A, X-Ray Crystal Structure Of Palmitic Acid Bound To The
Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3QH0|B Chain B, X-Ray Crystal Structure Of Palmitic Acid Bound To The
Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3QMO|A Chain A, X-Ray Crystal Structure Of Ns-398 Bound To The
Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3QMO|B Chain B, X-Ray Crystal Structure Of Ns-398 Bound To The
Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|4E1G|A Chain A, X-Ray Crystal Structure Of Alpha-Linolenic Acid Bound To
The Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|4E1G|B Chain B, X-Ray Crystal Structure Of Alpha-Linolenic Acid Bound To
The Cyclooxygenase Channel Of Cyclooxygenase-2
Length = 610
Score = 45.1 bits (105), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 33 TILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
TI +REHNR+ + L Q +P W DEQLFQ +R I+
Sbjct: 295 TIWLREHNRVCDILKQEHPEWGDEQLFQTSRLIL 328
>pdb|3OLT|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound To The
Cyclooxygenase Channel Of R513h Murine Cox-2
pdb|3OLT|B Chain B, X-Ray Crystal Structure Of Arachidonic Acid Bound To The
Cyclooxygenase Channel Of R513h Murine Cox-2
pdb|3OLU|A Chain A, X-Ray Crystal Structure Of 1-Arachidonoyl Glycerol Bound
To The Cyclooxygenase Channel Of R513h Murine Cox-2
pdb|3OLU|B Chain B, X-Ray Crystal Structure Of 1-Arachidonoyl Glycerol Bound
To The Cyclooxygenase Channel Of R513h Murine Cox-2
Length = 592
Score = 45.1 bits (105), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 33 TILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
TI +REHNR+ + L Q +P W DEQLFQ +R I+
Sbjct: 277 TIWLREHNRVCDILKQEHPEWGDEQLFQTSRLIL 310
>pdb|1DDX|A Chain A, Crystal Structure Of A Mixture Of Arachidonic Acid And
Prostaglandin Bound To The Cyclooxygenase Active Site Of
Cox-2: Prostaglandin Structure
pdb|1DDX|B Chain B, Crystal Structure Of A Mixture Of Arachidonic Acid And
Prostaglandin Bound To The Cyclooxygenase Active Site Of
Cox-2: Prostaglandin Structure
pdb|1DDX|C Chain C, Crystal Structure Of A Mixture Of Arachidonic Acid And
Prostaglandin Bound To The Cyclooxygenase Active Site Of
Cox-2: Prostaglandin Structure
pdb|1DDX|D Chain D, Crystal Structure Of A Mixture Of Arachidonic Acid And
Prostaglandin Bound To The Cyclooxygenase Active Site Of
Cox-2: Prostaglandin Structure
pdb|3NTG|A Chain A, Crystal Structure Of Cox-2 With Selective Compound 23d-(R)
pdb|3NTG|B Chain B, Crystal Structure Of Cox-2 With Selective Compound 23d-(R)
pdb|3NTG|C Chain C, Crystal Structure Of Cox-2 With Selective Compound 23d-(R)
pdb|3NTG|D Chain D, Crystal Structure Of Cox-2 With Selective Compound 23d-(R)
Length = 552
Score = 45.1 bits (105), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 33 TILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
TI +REHNR+ + L Q +P W DEQLFQ +R I+
Sbjct: 272 TIWLREHNRVCDILKQEHPEWGDEQLFQTSRLIL 305
>pdb|1PXX|A Chain A, Crystal Structure Of Diclofenac Bound To The
Cyclooxygenase Active Site Of Cox-2
pdb|1PXX|B Chain B, Crystal Structure Of Diclofenac Bound To The
Cyclooxygenase Active Site Of Cox-2
pdb|1PXX|C Chain C, Crystal Structure Of Diclofenac Bound To The
Cyclooxygenase Active Site Of Cox-2
pdb|1PXX|D Chain D, Crystal Structure Of Diclofenac Bound To The
Cyclooxygenase Active Site Of Cox-2
pdb|4FM5|A Chain A, X-Ray Structure Of Des-Methylflurbiprofen Bound To Murine
Cox-2
pdb|4FM5|B Chain B, X-Ray Structure Of Des-Methylflurbiprofen Bound To Murine
Cox-2
pdb|4FM5|C Chain C, X-Ray Structure Of Des-Methylflurbiprofen Bound To Murine
Cox-2
pdb|4FM5|D Chain D, X-Ray Structure Of Des-Methylflurbiprofen Bound To Murine
Cox-2
Length = 604
Score = 45.1 bits (105), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 33 TILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
TI +REHNR+ + L Q +P W DEQLFQ +R I+
Sbjct: 289 TIWLREHNRVCDILKQEHPEWGDEQLFQTSRLIL 322
>pdb|1CQE|A Chain A, Prostaglandin H2 Synthase-1 Complex With Flurbiprofen
pdb|1CQE|B Chain B, Prostaglandin H2 Synthase-1 Complex With Flurbiprofen
pdb|1EQG|A Chain A, The 2.6 Angstrom Model Of Ovine Cox-1 Complexed With
Ibuprofen
pdb|1EQG|B Chain B, The 2.6 Angstrom Model Of Ovine Cox-1 Complexed With
Ibuprofen
pdb|1EQH|A Chain A, The 2.7 Angstrom Model Of Ovine Cox-1 Complexed With
Flurbiprofen
pdb|1EQH|B Chain B, The 2.7 Angstrom Model Of Ovine Cox-1 Complexed With
Flurbiprofen
Length = 580
Score = 43.9 bits (102), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 6/45 (13%)
Query: 22 LMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
LML++ TI +REHNR+ + L +P W DEQLFQ AR I+
Sbjct: 278 LMLYA------TIWLREHNRVCDLLKAEHPTWGDEQLFQTARLIL 316
>pdb|1PTH|A Chain A, The Structural Basis Of Aspirin Activity Inferred From The
Crystal Structure Of Inactivated Prostaglandin H2
Synthase
pdb|1PTH|B Chain B, The Structural Basis Of Aspirin Activity Inferred From The
Crystal Structure Of Inactivated Prostaglandin H2
Synthase
Length = 576
Score = 43.9 bits (102), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 6/45 (13%)
Query: 22 LMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
LML++ TI +REHNR+ + L +P W DEQLFQ AR I+
Sbjct: 274 LMLYA------TIWLREHNRVCDLLKAEHPTWGDEQLFQTARLIL 312
>pdb|1PGE|A Chain A, Prostaglandin H2 Synthase-1 Complexed With
P-(2'-Iodo-5'-Thenoyl) Hydrotropic Acid (Iodosuprofen)
pdb|1PGE|B Chain B, Prostaglandin H2 Synthase-1 Complexed With
P-(2'-Iodo-5'-Thenoyl) Hydrotropic Acid (Iodosuprofen)
pdb|1PGF|A Chain A, Prostaglandin H2 Synthase-1 Complexed With
1-(4-Iodobenzoyl)-5- Methoxy-2-Methylindole-3-Acetic
Acid (Iodoindomethacin), Cis Model
pdb|1PGF|B Chain B, Prostaglandin H2 Synthase-1 Complexed With
1-(4-Iodobenzoyl)-5- Methoxy-2-Methylindole-3-Acetic
Acid (Iodoindomethacin), Cis Model
pdb|1PGG|A Chain A, Prostaglandin H2 Synthase-1 Complexed With
1-(4-Iodobenzoyl)-5- Methoxy-2-Methylindole-3-Acetic
Acid (Iodoindomethacin), Trans Model
pdb|1PGG|B Chain B, Prostaglandin H2 Synthase-1 Complexed With
1-(4-Iodobenzoyl)-5- Methoxy-2-Methylindole-3-Acetic
Acid (Iodoindomethacin), Trans Model
pdb|1FE2|A Chain A, Crystal Structure Of Dihomo-Gamma-Linoleic Acid Bound In
The Cyclooxygenase Channel Of Prostaglandin Endoperoxide
H Synthase-1.
pdb|1IGZ|A Chain A, Crystal Structure Of Linoleic Acid Bound In The
Cyclooxygenase Channel Of Prostaglandin Endoperoxide H
Synthase-1.
pdb|1IGX|A Chain A, Crystal Structure Of Eicosapentanoic Acid Bound In The
Cyclooxygenase Channel Of Prostaglandin Endoperoxide H
Synthase-1
Length = 576
Score = 43.9 bits (102), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 6/45 (13%)
Query: 22 LMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
LML++ TI +REHNR+ + L +P W DEQLFQ AR I+
Sbjct: 274 LMLYA------TIWLREHNRVCDLLKAEHPTWGDEQLFQTARLIL 312
>pdb|1U67|A Chain A, Crystal Structure Of Arachidonic Acid Bound To A Mutant Of
Prostagladin H Synthase-1 That Forms Predominantly
11-hpete
Length = 600
Score = 43.9 bits (102), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 6/45 (13%)
Query: 22 LMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
LML++ TI +REHNR+ + L +P W DEQLFQ AR I+
Sbjct: 298 LMLYA------TIWLREHNRVCDLLKAEHPTWGDEQLFQTARLIL 336
>pdb|2OYE|P Chain P, Indomethacin-(r)-alpha-ethyl-ethanolamide Bound To
Cyclooxygenase-1
pdb|2OYU|P Chain P, Indomethacin-(S)-Alpha-Ethyl-Ethanolamide Bound To
Cyclooxygenase-1
Length = 600
Score = 43.9 bits (102), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 6/45 (13%)
Query: 22 LMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
LML++ TI +REHNR+ + L +P W DEQLFQ AR I+
Sbjct: 298 LMLYA------TIWLREHNRVCDLLKAEHPTWGDEQLFQTARLIL 336
>pdb|3N8W|B Chain B, Crystal Structure Of R120qNATIVE CYCLOOXYGENASE-1
Heterodimer Mutant In Complex With Flurbiprofen
Length = 553
Score = 43.9 bits (102), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 6/45 (13%)
Query: 22 LMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
LML++ TI +REHNR+ + L +P W DEQLFQ AR I+
Sbjct: 267 LMLYA------TIWLREHNRVCDLLKAEHPTWGDEQLFQTARLIL 305
>pdb|1HT5|A Chain A, The 2.75 Angstrom Resolution Model Of Ovine Cox-1
Complexed With Methyl Ester Flurbiprofen
pdb|1HT5|B Chain B, The 2.75 Angstrom Resolution Model Of Ovine Cox-1
Complexed With Methyl Ester Flurbiprofen
pdb|1HT8|A Chain A, The 2.7 Angstrom Resolution Model Of Ovine Cox-1 Complexed
With Alclofenac
pdb|1HT8|B Chain B, The 2.7 Angstrom Resolution Model Of Ovine Cox-1 Complexed
With Alclofenac
Length = 551
Score = 43.9 bits (102), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 6/45 (13%)
Query: 22 LMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
LML++ TI +REHNR+ + L +P W DEQLFQ AR I+
Sbjct: 266 LMLYA------TIWLREHNRVCDLLKAEHPTWGDEQLFQTARLIL 304
>pdb|1EBV|A Chain A, Ovine Pghs-1 Complexed With Salicyl Hydroxamic Acid
Length = 551
Score = 43.9 bits (102), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 6/45 (13%)
Query: 22 LMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
LML++ TI +REHNR+ + L +P W DEQLFQ AR I+
Sbjct: 266 LMLYA------TIWLREHNRVCDLLKAEHPTWGDEQLFQTARLIL 304
>pdb|3N8Y|B Chain B, Structure Of Aspirin Acetylated Cyclooxygenase-1 In
Complex With Diclofenac
Length = 553
Score = 43.9 bits (102), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 6/45 (13%)
Query: 22 LMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
LML++ TI +REHNR+ + L +P W DEQLFQ AR I+
Sbjct: 267 LMLYA------TIWLREHNRVCDLLKAEHPTWGDEQLFQTARLIL 305
>pdb|1DIY|A Chain A, Crystal Structure Of Arachidonic Acid Bound In The
Cyclooxygenase Active Site Of Pghs-1
pdb|1Q4G|A Chain A, 2.0 Angstrom Crystal Structure Of Ovine Prostaglandin H2
Synthase-1, In Complex With
Alpha-Methyl-4-Biphenylacetic Acid
pdb|1Q4G|B Chain B, 2.0 Angstrom Crystal Structure Of Ovine Prostaglandin H2
Synthase-1, In Complex With
Alpha-Methyl-4-Biphenylacetic Acid
pdb|2AYL|A Chain A, 2.0 Angstrom Crystal Structure Of Manganese Protoporphyrin
Ix- Reconstituted Ovine Prostaglandin H2 Synthase-1
Complexed With Flurbiprofen
pdb|2AYL|B Chain B, 2.0 Angstrom Crystal Structure Of Manganese Protoporphyrin
Ix- Reconstituted Ovine Prostaglandin H2 Synthase-1
Complexed With Flurbiprofen
pdb|3KK6|A Chain A, Crystal Structure Of Cyclooxygenase-1 In Complex With
Celecoxib
pdb|3KK6|B Chain B, Crystal Structure Of Cyclooxygenase-1 In Complex With
Celecoxib
pdb|3N8V|A Chain A, Crystal Structure Of Unoccupied Cyclooxygenase-1
pdb|3N8V|B Chain B, Crystal Structure Of Unoccupied Cyclooxygenase-1
pdb|3N8W|A Chain A, Crystal Structure Of R120qNATIVE CYCLOOXYGENASE-1
Heterodimer Mutant In Complex With Flurbiprofen
pdb|3N8X|A Chain A, Crystal Structure Of Cyclooxygenase-1 In Complex With
Nimesulide
pdb|3N8X|B Chain B, Crystal Structure Of Cyclooxygenase-1 In Complex With
Nimesulide
pdb|3N8Y|A Chain A, Structure Of Aspirin Acetylated Cyclooxygenase-1 In
Complex With Diclofenac
pdb|3N8Z|A Chain A, Crystal Structure Of Cyclooxygenase-1 In Complex With
Flurbiprofen
pdb|3N8Z|B Chain B, Crystal Structure Of Cyclooxygenase-1 In Complex With
Flurbiprofen
Length = 553
Score = 43.9 bits (102), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 6/45 (13%)
Query: 22 LMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
LML++ TI +REHNR+ + L +P W DEQLFQ AR I+
Sbjct: 267 LMLYA------TIWLREHNRVCDLLKAEHPTWGDEQLFQTARLIL 305
>pdb|1CVU|A Chain A, Crystal Structure Of Arachidonic Acid Bound To The
Cyclooxygenase Active Site Of Cox-2
pdb|1CVU|B Chain B, Crystal Structure Of Arachidonic Acid Bound To The
Cyclooxygenase Active Site Of Cox-2
Length = 552
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 33 TILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
TI +REH R+ + L Q +P W DEQLFQ ++ I+
Sbjct: 272 TIWLREHQRVCDILKQEHPEWGDEQLFQTSKLIL 305
>pdb|3PGH|A Chain A, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Non- Selective Inhibitor, Flurbiprofen
pdb|3PGH|B Chain B, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Non- Selective Inhibitor, Flurbiprofen
pdb|3PGH|C Chain C, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Non- Selective Inhibitor, Flurbiprofen
pdb|3PGH|D Chain D, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Non- Selective Inhibitor, Flurbiprofen
pdb|4COX|A Chain A, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Non- Selective Inhibitor, Indomethacin
pdb|4COX|B Chain B, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Non- Selective Inhibitor, Indomethacin
pdb|4COX|C Chain C, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Non- Selective Inhibitor, Indomethacin
pdb|4COX|D Chain D, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Non- Selective Inhibitor, Indomethacin
pdb|5COX|A Chain A, Uninhibited Mouse Cyclooxygenase-2 (Prostaglandin
Synthase-2)
pdb|5COX|B Chain B, Uninhibited Mouse Cyclooxygenase-2 (Prostaglandin
Synthase-2)
pdb|5COX|C Chain C, Uninhibited Mouse Cyclooxygenase-2 (Prostaglandin
Synthase-2)
pdb|5COX|D Chain D, Uninhibited Mouse Cyclooxygenase-2 (Prostaglandin
Synthase-2)
pdb|6COX|A Chain A, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Selective Inhibitor, Sc-558 In I222 Space Group
pdb|6COX|B Chain B, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Selective Inhibitor, Sc-558 In I222 Space Group
pdb|1CX2|A Chain A, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Selective Inhibitor, Sc-558
pdb|1CX2|B Chain B, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Selective Inhibitor, Sc-558
pdb|1CX2|C Chain C, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Selective Inhibitor, Sc-558
pdb|1CX2|D Chain D, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Selective Inhibitor, Sc-558
Length = 587
Score = 41.2 bits (95), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 33 TILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
TI +REH R+ + L Q +P W DEQLFQ ++ I+
Sbjct: 272 TIWLREHQRVCDILKQEHPEWGDEQLFQTSKLIL 305
>pdb|1PRH|A Chain A, The X-Ray Crystal Structure Of The Membrane Protein
Prostaglandin H2 Synthase-1
pdb|1PRH|B Chain B, The X-Ray Crystal Structure Of The Membrane Protein
Prostaglandin H2 Synthase-1
Length = 554
Score = 40.0 bits (92), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 6/45 (13%)
Query: 22 LMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
LML++ TI +REH R+ + L +P W DEQLFQ A+ I+
Sbjct: 266 LMLYA------TIWLREHQRVCDLLKAEHPTWGDEQLFQTAKLIL 304
>pdb|2BB0|A Chain A, Structure Of Imidazolonepropionase From Bacillus Subtilis
pdb|2BB0|B Chain B, Structure Of Imidazolonepropionase From Bacillus Subtilis
pdb|2G3F|A Chain A, Crystal Structure Of Imidazolonepropionase Complexed With
Imidazole-4- Acetic Acid Sodium Salt, A Substrate
Homologue
pdb|2G3F|B Chain B, Crystal Structure Of Imidazolonepropionase Complexed With
Imidazole-4- Acetic Acid Sodium Salt, A Substrate
Homologue
Length = 421
Score = 26.9 bits (58), Expect = 2.6, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 2 EGLQNSLALQSSPGGNRTHNLMLFSMFAAMHTILMRE 38
EG+ SLA +PG + T N+ L AA+H + E
Sbjct: 315 EGVCVSLATDFNPGSSPTENIQLIMSIAALHLKMTAE 351
>pdb|1I7E|A Chain A, C-Terminal Domain Of Mouse Brain Tubby Protein Bound To
Phosphatidylinositol 4,5-Bis-Phosphate
Length = 265
Score = 26.2 bits (56), Expect = 4.3, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 14 PGGNRTHNLMLFSMFAAMHTILMREHNRLAEQLVQIN---PHWNDE 56
PG N H + T+L R N+ E ++++ P WND+
Sbjct: 149 PGMNMVHERVCIRPRNEHETLLARWQNKNTESIIELQNKTPVWNDD 194
>pdb|1C8Z|A Chain A, C-Terminal Domain Of Mouse Brain Tubby Protein
Length = 265
Score = 26.2 bits (56), Expect = 4.4, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 14 PGGNRTHNLMLFSMFAAMHTILMREHNRLAEQLVQIN---PHWNDE 56
PG N H + T+L R N+ E ++++ P WND+
Sbjct: 149 PGMNMVHERVCIRPRNEHETLLARWQNKNTESIIELQNKTPVWNDD 194
>pdb|1V8V|A Chain A, Crystal Structure Analysis Of The Adp-Ribose
Pyrophosphatase Of E86q Mutant, Complexed With
Adp-Ribose And Mg
pdb|1V8Y|A Chain A, Crystal Structure Analysis Of The Adp-Ribose
Pyrophosphatase Of E86q Mutant, Complexed With
Adp-Ribose And Zn
Length = 170
Score = 25.8 bits (55), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 1 MEGLQNSLALQSSPGGNRTHNLMLFSMFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQ 60
+E + LA Q+ G+ T+ LFS F + + H LAE L ++ H ++++ +
Sbjct: 76 LEAARRELAEQTGLSGDLTY---LFSYFVSPGFTDEKTHVFLAENLKEVEAHPDEDEAIE 132
>pdb|1S31|A Chain A, Crystal Structure Analysis Of The Human Tub Protein
(isoform A) Spanning Residues 289 Through 561
Length = 273
Score = 25.8 bits (55), Expect = 6.4, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 14 PGGNRTHNLMLFSMFAAMHTILMREHNRLAEQLVQIN---PHWNDE 56
PG N H + T+L R N+ E ++++ P WND+
Sbjct: 157 PGMNMVHERVSIRPRNEHETLLARWQNKNTESIIELQNKTPVWNDD 202
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.132 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,687,773
Number of Sequences: 62578
Number of extensions: 41818
Number of successful extensions: 133
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 94
Number of HSP's gapped (non-prelim): 43
length of query: 66
length of database: 14,973,337
effective HSP length: 37
effective length of query: 29
effective length of database: 12,657,951
effective search space: 367080579
effective search space used: 367080579
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 45 (21.9 bits)