RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy11277
         (66 letters)



>d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis
           aries) [TaxId: 9940]}
          Length = 511

 Score = 66.5 bits (162), Expect = 1e-15
 Identities = 19/39 (48%), Positives = 24/39 (61%)

Query: 28  FAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
                TI +REHNR+ + L   +P W DEQLFQ AR I+
Sbjct: 225 LMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLIL 263


>d1cvua1 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mouse (Mus
           musculus) [TaxId: 10090]}
          Length = 511

 Score = 63.4 bits (154), Expect = 1e-14
 Identities = 17/38 (44%), Positives = 24/38 (63%)

Query: 29  AAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
               TI +REH R+ + L Q +P W DEQLFQ ++ I+
Sbjct: 227 MMYATIWLREHQRVCDILKQEHPEWGDEQLFQTSKLIL 264


>g1cxp.1 a.93.1.2 (A:,C:) Myeloperoxidase {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 570

 Score = 63.2 bits (153), Expect = 2e-14
 Identities = 21/40 (52%), Positives = 31/40 (77%)

Query: 27  MFAAMHTILMREHNRLAEQLVQINPHWNDEQLFQHARRIM 66
              +MHT+L+REHNRLA +L  +NP W+ E+L+Q AR+I+
Sbjct: 237 ELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIV 276


>d1r4xa2 d.105.1.2 (A:763-873) Coatomer gamma subunit, C-terminal
          subdomain {Human (Homo sapiens) [TaxId: 9606]}
          Length = 111

 Score = 22.0 bits (47), Expect = 7.0
 Identities = 10/24 (41%), Positives = 13/24 (54%)

Query: 14 PGGNRTHNLMLFSMFAAMHTILMR 37
          P    TH L+L  +F   H IL+R
Sbjct: 58 PDNKNTHTLLLAGVFRGGHDILVR 81


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.324    0.132    0.395 

Gapped
Lambda     K      H
   0.267   0.0517    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 227,807
Number of extensions: 7199
Number of successful extensions: 25
Number of sequences better than 10.0: 1
Number of HSP's gapped: 25
Number of HSP's successfully gapped: 7
Length of query: 66
Length of database: 2,407,596
Length adjustment: 35
Effective length of query: 31
Effective length of database: 1,927,046
Effective search space: 59738426
Effective search space used: 59738426
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (22.4 bits)