Your job contains 1 sequence.
>psy11278
MKLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLER
ARYRVRELTPLIFCFEYPLMGSTPNANSPFVQIIQEAYNVQVMFRNRPKLQPTLVMVKGC
EKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQTGAQ
IVFPEANDPIIPVLKKSSVTVSGNIDSVYLARQMLVVSSVRPRRRLLLITIPNDIIKS
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11278
(238 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0000182 - symbol:BicC "Bicaudal C" species:7227 "D... 605 1.4e-58 1
UNIPROTKB|F1PUI2 - symbol:BICC1 "Uncharacterized protein"... 566 2.4e-54 1
UNIPROTKB|F1PUI0 - symbol:BICC1 "Uncharacterized protein"... 566 2.8e-54 1
UNIPROTKB|F1MDL5 - symbol:BICC1 "Uncharacterized protein"... 565 3.1e-54 1
UNIPROTKB|Q9H694 - symbol:BICC1 "Protein bicaudal C homol... 566 4.8e-54 1
UNIPROTKB|F1RG08 - symbol:BICC1 "Uncharacterized protein"... 563 6.3e-54 1
UNIPROTKB|F1NFQ2 - symbol:BICC1 "Uncharacterized protein"... 556 3.2e-53 1
ZFIN|ZDB-GENE-080522-3 - symbol:bicc1b "bicaudal C homolo... 552 1.0e-52 1
MGI|MGI:1933388 - symbol:Bicc1 "bicaudal C homolog 1 (Dro... 552 1.6e-52 1
RGD|1307459 - symbol:Bicc1 "bicaudal C homolog 1 (Drosoph... 550 1.8e-52 1
ZFIN|ZDB-GENE-110110-3 - symbol:bicc2 "bicaudal C homolog... 443 6.2e-41 1
WB|WBGene00000246 - symbol:bcc-1 species:6239 "Caenorhabd... 186 1.7e-13 1
ZFIN|ZDB-GENE-030131-6822 - symbol:wu:fa07b03 "wu:fa07b03... 177 4.0e-12 1
UNIPROTKB|E1C3A9 - symbol:HDLBP "Vigilin" species:9031 "G... 172 1.4e-11 1
ZFIN|ZDB-GENE-030131-2032 - symbol:hdlbp "high density li... 159 2.7e-09 1
FB|FBgn0027835 - symbol:Dp1 "Dodeca-satellite-binding pro... 153 2.4e-08 1
UNIPROTKB|E2RNS5 - symbol:HDLBP "Uncharacterized protein"... 152 2.9e-08 1
UNIPROTKB|E2RET1 - symbol:HDLBP "Uncharacterized protein"... 152 3.1e-08 1
MGI|MGI:99256 - symbol:Hdlbp "high density lipoprotein (H... 150 6.0e-08 1
RGD|620962 - symbol:Hdlbp "high density lipoprotein bindi... 150 6.0e-08 1
UNIPROTKB|Q3KRF2 - symbol:Hdlbp "High density lipoprotein... 150 6.0e-08 1
UNIPROTKB|H0Y394 - symbol:HDLBP "Vigilin" species:9606 "H... 149 6.1e-08 1
UNIPROTKB|Q00341 - symbol:HDLBP "Vigilin" species:9606 "H... 149 8.4e-08 1
UNIPROTKB|F1SI06 - symbol:HDLBP "Uncharacterized protein"... 146 1.7e-07 1
UNIPROTKB|F1NNX1 - symbol:HDLBP "Vigilin" species:9031 "G... 131 1.5e-05 1
SGD|S000003616 - symbol:SCP160 "Essential RNA-binding G p... 125 7.1e-05 1
RGD|1563104 - symbol:RGD1563104 "similar to Vigilin (High... 125 7.3e-05 1
UNIPROTKB|P81021 - symbol:HDLBP "Vigilin" species:9031 "G... 124 9.7e-05 1
WB|WBGene00007463 - symbol:C08H9.2 species:6239 "Caenorha... 122 0.00016 1
UNIPROTKB|H7BZC3 - symbol:HDLBP "Vigilin" species:9606 "H... 112 0.00025 1
UNIPROTKB|F1MT25 - symbol:HDLBP "Uncharacterized protein"... 86 0.00025 2
>FB|FBgn0000182 [details] [associations]
symbol:BicC "Bicaudal C" species:7227 "Drosophila
melanogaster" [GO:0007297 "ovarian follicle cell migration"
evidence=IMP] [GO:0048477 "oogenesis" evidence=NAS;IMP;TAS]
[GO:0007319 "negative regulation of oskar mRNA translation"
evidence=TAS] [GO:0003729 "mRNA binding" evidence=ISS;NAS;TAS]
[GO:0005887 "integral to plasma membrane" evidence=NAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IMP] [GO:0030036
"actin cytoskeleton organization" evidence=IMP] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP]
InterPro:IPR001660 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50105 SMART:SM00322
SMART:SM00454 GO:GO:0007275 GO:GO:0000226 GO:GO:0007067
EMBL:AE014134 GO:GO:0030036 GO:GO:0003729 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GeneTree:ENSGT00690000102145 eggNOG:NOG259272 HSSP:Q00341
EMBL:U15928 EMBL:BT023837 PIR:S55051 RefSeq:NP_476865.1
RefSeq:NP_723948.1 RefSeq:NP_723949.1 UniGene:Dm.7521
ProteinModelPortal:Q24009 SMR:Q24009 IntAct:Q24009 MINT:MINT-781087
STRING:Q24009 EnsemblMetazoa:FBtr0080803 EnsemblMetazoa:FBtr0080804
GeneID:34946 KEGG:dme:Dmel_CG4824 CTD:34946 FlyBase:FBgn0000182
InParanoid:Q24009 OMA:LISFEMP OrthoDB:EOG4FBG7V PhylomeDB:Q24009
GenomeRNAi:34946 NextBio:791021 Bgee:Q24009 GermOnline:CG4824
GO:GO:0007319 GO:GO:0007297 Uniprot:Q24009
Length = 905
Score = 605 (218.0 bits), Expect = 1.4e-58, P = 1.4e-58
Identities = 119/216 (55%), Positives = 159/216 (73%)
Query: 1 MKLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLER 60
MK+DVSYTDHS+IIGRGG IK++M++T H+HFPDSNRS EKSNQVS+ GSL G+ER
Sbjct: 175 MKMDVSYTDHSYIIGRGGNNIKRIMDDTHTHIHFPDSNRSNPTEKSNQVSLCGSLEGVER 234
Query: 61 ARYRVRELTPLIFCFEYPLMGST---PNANSPFVQIIQEAYNVQVMFRNRPKLQPTLVMV 117
AR VR TPL+ FE P+MG P+ +P++++I+ +NVQV+F RPKL +LV+V
Sbjct: 235 ARALVRLSTPLLISFEMPVMGPNKPQPDHETPYIKMIETKFNVQVIFSTRPKLHTSLVLV 294
Query: 118 KGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQT 177
KG EK+ +V++AT LI C S+A+Q V + MEISPQHH I++G N +NL +IM +T
Sbjct: 295 KGSEKESAQVRDATQLLINFACESIASQILVNVQMEISPQHHEIVKGKNNVNLLSIMERT 354
Query: 178 GAQIVFPEANDPIIPVLKKSSVTVSGNIDSVYLARQ 213
+I+FP+ +D + LKKS VT+SG ID VYLARQ
Sbjct: 355 QTKIIFPDLSDMNVKPLKKSQVTISGRIDDVYLARQ 390
Score = 139 (54.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 33/136 (24%), Positives = 70/136 (51%)
Query: 1 MKLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPD-SNRSVNAEKSNQVSIAGSLLGLE 59
+++++S H + G+ + + +ME T + FPD S+ +V K +QV+I+G + +
Sbjct: 327 VQMEISPQHHEIVKGKNNVNLLSIMERTQTKIIFPDLSDMNVKPLKKSQVTISGRIDDVY 386
Query: 60 RARYRVRELTPLIFCFEYPLMGSTPNANSPFVQIIQEAYNVQVMFRNRPKLQPTLVMVKG 119
AR ++ P+ F++P N S + + Y V + R + + ++VKG
Sbjct: 387 LARQQLLGNLPVALIFDFP---DNHNDASEIMSL-NTKYGVYITLRQKQRQSTLAIVVKG 442
Query: 120 CEKDVERVKEATTKLI 135
EK ++++ EA +++
Sbjct: 443 VEKFIDKIYEARQEIL 458
>UNIPROTKB|F1PUI2 [details] [associations]
symbol:BICC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001660 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50105
SMART:SM00322 SMART:SM00454 GO:GO:0003723 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0090090 GeneTree:ENSGT00690000102145 EMBL:AAEX03002736
Ensembl:ENSCAFT00000019599 Uniprot:F1PUI2
Length = 872
Score = 566 (204.3 bits), Expect = 2.4e-54, P = 2.4e-54
Identities = 112/216 (51%), Positives = 149/216 (68%)
Query: 1 MKLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLER 60
+K+DVS+T+HSH+IG+GG IKKVMEETGCH+HFPDSNR+ AEKSNQVSIAG G+E
Sbjct: 33 LKMDVSHTEHSHVIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVES 92
Query: 61 ARYRVRELTPLIFCFEYPLMG---STPNANSPFVQIIQEAYNVQVMFRNRPKLQPTLVMV 117
AR R+REL PL+ FE P+ G P+ NSP +Q I + YN+ V F+ R ++ V+V
Sbjct: 93 ARVRIRELLPLVLMFELPIAGILQPVPDPNSPSIQHISQTYNISVSFKQRSRMYGATVIV 152
Query: 118 KGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQT 177
+G + + VKE T L+EH+ GSLA+ V ++I+ QHH M G N N+K IM +T
Sbjct: 153 RGSQNNTSAVKEGTATLLEHLAGSLASAIPVSTQLDIAAQHHLFMMGRNGSNIKHIMQRT 212
Query: 178 GAQIVFPEANDPIIPVLKKSSVTVSGNIDSVYLARQ 213
GAQI FP+ ++P KKS+V + G I+SV LARQ
Sbjct: 213 GAQIHFPDPSNP----QKKSTVYLQGTIESVCLARQ 244
Score = 151 (58.2 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 37/134 (27%), Positives = 67/134 (50%)
Query: 2 KLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERA 61
+LD++ H ++GR G IK +M+ TG +HFPD + N +K + V + G++ + A
Sbjct: 186 QLDIAAQHHLFMMGRNGSNIKHIMQRTGAQIHFPDPS---NPQKKSTVYLQGTIESVCLA 242
Query: 62 RYRVRELTPLIFCFEYPLMGSTPNANSPFVQIIQEAYNVQVMFRNRPKLQPTLVMVKGCE 121
R + PL+ F+ M + F+ + E +V + + +PK V+VK E
Sbjct: 243 RQYLMGCLPLVLMFD---MKEEIEVDPQFIAQLMEQLDVFISIKPKPKQPSKSVIVKSVE 299
Query: 122 KDVERVKEATTKLI 135
++ + EA L+
Sbjct: 300 RNALNMYEARKCLL 313
>UNIPROTKB|F1PUI0 [details] [associations]
symbol:BICC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001660 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50105 SMART:SM00322
SMART:SM00454 GO:GO:0003723 Gene3D:1.10.150.50 InterPro:IPR013761
InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GeneTree:ENSGT00690000102145 OMA:EWSEERF EMBL:AAEX03002736
Ensembl:ENSCAFT00000019604 Uniprot:F1PUI0
Length = 889
Score = 566 (204.3 bits), Expect = 2.8e-54, P = 2.8e-54
Identities = 112/216 (51%), Positives = 149/216 (68%)
Query: 1 MKLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLER 60
+K+DVS+T+HSH+IG+GG IKKVMEETGCH+HFPDSNR+ AEKSNQVSIAG G+E
Sbjct: 75 LKMDVSHTEHSHVIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVES 134
Query: 61 ARYRVRELTPLIFCFEYPLMG---STPNANSPFVQIIQEAYNVQVMFRNRPKLQPTLVMV 117
AR R+REL PL+ FE P+ G P+ NSP +Q I + YN+ V F+ R ++ V+V
Sbjct: 135 ARVRIRELLPLVLMFELPIAGILQPVPDPNSPSIQHISQTYNISVSFKQRSRMYGATVIV 194
Query: 118 KGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQT 177
+G + + VKE T L+EH+ GSLA+ V ++I+ QHH M G N N+K IM +T
Sbjct: 195 RGSQNNTSAVKEGTATLLEHLAGSLASAIPVSTQLDIAAQHHLFMMGRNGSNIKHIMQRT 254
Query: 178 GAQIVFPEANDPIIPVLKKSSVTVSGNIDSVYLARQ 213
GAQI FP+ ++P KKS+V + G I+SV LARQ
Sbjct: 255 GAQIHFPDPSNP----QKKSTVYLQGTIESVCLARQ 286
Score = 151 (58.2 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 37/134 (27%), Positives = 67/134 (50%)
Query: 2 KLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERA 61
+LD++ H ++GR G IK +M+ TG +HFPD + N +K + V + G++ + A
Sbjct: 228 QLDIAAQHHLFMMGRNGSNIKHIMQRTGAQIHFPDPS---NPQKKSTVYLQGTIESVCLA 284
Query: 62 RYRVRELTPLIFCFEYPLMGSTPNANSPFVQIIQEAYNVQVMFRNRPKLQPTLVMVKGCE 121
R + PL+ F+ M + F+ + E +V + + +PK V+VK E
Sbjct: 285 RQYLMGCLPLVLMFD---MKEEIEVDPQFIAQLMEQLDVFISIKPKPKQPSKSVIVKSVE 341
Query: 122 KDVERVKEATTKLI 135
++ + EA L+
Sbjct: 342 RNALNMYEARKCLL 355
>UNIPROTKB|F1MDL5 [details] [associations]
symbol:BICC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001660 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50105
SMART:SM00322 SMART:SM00454 GO:GO:0003723 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0090090 GeneTree:ENSGT00690000102145 OMA:EWSEERF
EMBL:DAAA02061579 IPI:IPI00710869 Ensembl:ENSBTAT00000031361
Uniprot:F1MDL5
Length = 870
Score = 565 (203.9 bits), Expect = 3.1e-54, P = 3.1e-54
Identities = 112/216 (51%), Positives = 149/216 (68%)
Query: 1 MKLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLER 60
+K+DVS+T+HSH+IG+GG IKKVMEETGCH+HFPDSNR+ AEKSNQVSIAG G+E
Sbjct: 33 LKMDVSHTEHSHVIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVES 92
Query: 61 ARYRVRELTPLIFCFEYPLMG---STPNANSPFVQIIQEAYNVQVMFRNRPKLQPTLVMV 117
AR R+REL PL+ FE P+ G P+ NSP +Q I + YN+ V F+ R ++ V+V
Sbjct: 93 ARVRIRELLPLVLMFELPIAGILQPVPDPNSPSIQHISQMYNISVSFKQRSRMYGATVIV 152
Query: 118 KGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQT 177
+G + + VKE T L+EH+ GSLA+ V ++I+ QHH M G N N+K IM +T
Sbjct: 153 RGSQNNTSAVKEGTATLLEHLAGSLASAIPVSTQLDIAAQHHLFMMGRNGSNIKHIMQRT 212
Query: 178 GAQIVFPEANDPIIPVLKKSSVTVSGNIDSVYLARQ 213
GAQI FP+ ++P KKS+V + G I+SV LARQ
Sbjct: 213 GAQIHFPDPSNP----QKKSTVYLQGTIESVCLARQ 244
Score = 151 (58.2 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 37/134 (27%), Positives = 67/134 (50%)
Query: 2 KLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERA 61
+LD++ H ++GR G IK +M+ TG +HFPD + N +K + V + G++ + A
Sbjct: 186 QLDIAAQHHLFMMGRNGSNIKHIMQRTGAQIHFPDPS---NPQKKSTVYLQGTIESVCLA 242
Query: 62 RYRVRELTPLIFCFEYPLMGSTPNANSPFVQIIQEAYNVQVMFRNRPKLQPTLVMVKGCE 121
R + PL+ F+ M + F+ + E +V + + +PK V+VK E
Sbjct: 243 RQYLMGCLPLVLMFD---MKEEIEVDPQFIAQLMEQLDVFISIKPKPKQPSKSVIVKSVE 299
Query: 122 KDVERVKEATTKLI 135
++ + EA L+
Sbjct: 300 RNALNMYEARKCLL 313
>UNIPROTKB|Q9H694 [details] [associations]
symbol:BICC1 "Protein bicaudal C homolog 1" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=IDA] InterPro:IPR001660 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50105
SMART:SM00322 SMART:SM00454 GO:GO:0007275 GO:GO:0003723
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0090090 EMBL:AY726586
EMBL:AK026129 IPI:IPI00017921 IPI:IPI00645643 RefSeq:NP_001073981.1
UniGene:Hs.158745 ProteinModelPortal:Q9H694 SMR:Q9H694
STRING:Q9H694 PhosphoSite:Q9H694 DMDM:119367815 PaxDb:Q9H694
PRIDE:Q9H694 DNASU:80114 Ensembl:ENST00000373886 GeneID:80114
KEGG:hsa:80114 UCSC:uc001jki.1 CTD:80114 GeneCards:GC10P060272
H-InvDB:HIX0008843 HGNC:HGNC:19351 HPA:HPA045212 MIM:601331
MIM:614295 neXtProt:NX_Q9H694 Orphanet:97364 Orphanet:97363
PharmGKB:PA134878124 eggNOG:NOG259272 HOGENOM:HOG000068054
HOVERGEN:HBG058964 InParanoid:Q9H694 OMA:EWSEERF OrthoDB:EOG40P466
GenomeRNAi:80114 NextBio:70334 ArrayExpress:Q9H694 Bgee:Q9H694
CleanEx:HS_BICC1 Genevestigator:Q9H694 GermOnline:ENSG00000122870
Uniprot:Q9H694
Length = 974
Score = 566 (204.3 bits), Expect = 4.8e-54, P = 4.8e-54
Identities = 112/216 (51%), Positives = 149/216 (68%)
Query: 1 MKLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLER 60
+K+DVS+T+HSH+IG+GG IKKVMEETGCH+HFPDSNR+ AEKSNQVSIAG G+E
Sbjct: 135 LKMDVSHTEHSHVIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVES 194
Query: 61 ARYRVRELTPLIFCFEYPLMG---STPNANSPFVQIIQEAYNVQVMFRNRPKLQPTLVMV 117
AR R+REL PL+ FE P+ G P+ NSP +Q I + YN+ V F+ R ++ V+V
Sbjct: 195 ARVRIRELLPLVLMFELPIAGILQPVPDPNSPSIQHISQTYNISVSFKQRSRMYGATVIV 254
Query: 118 KGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQT 177
+G + + VKE T L+EH+ GSLA+ V ++I+ QHH M G N N+K IM +T
Sbjct: 255 RGSQNNTSAVKEGTAMLLEHLAGSLASAIPVSTQLDIAAQHHLFMMGRNGSNIKHIMQRT 314
Query: 178 GAQIVFPEANDPIIPVLKKSSVTVSGNIDSVYLARQ 213
GAQI FP+ ++P KKS+V + G I+SV LARQ
Sbjct: 315 GAQIHFPDPSNP----QKKSTVYLQGTIESVCLARQ 346
Score = 151 (58.2 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 37/134 (27%), Positives = 67/134 (50%)
Query: 2 KLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERA 61
+LD++ H ++GR G IK +M+ TG +HFPD + N +K + V + G++ + A
Sbjct: 288 QLDIAAQHHLFMMGRNGSNIKHIMQRTGAQIHFPDPS---NPQKKSTVYLQGTIESVCLA 344
Query: 62 RYRVRELTPLIFCFEYPLMGSTPNANSPFVQIIQEAYNVQVMFRNRPKLQPTLVMVKGCE 121
R + PL+ F+ M + F+ + E +V + + +PK V+VK E
Sbjct: 345 RQYLMGCLPLVLMFD---MKEEIEVDPQFIAQLMEQLDVFISIKPKPKQPSKSVIVKSVE 401
Query: 122 KDVERVKEATTKLI 135
++ + EA L+
Sbjct: 402 RNALNMYEARKCLL 415
Score = 36 (17.7 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 143 ANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQTGA 179
A + ++ + E++ + E PNA +T + GA
Sbjct: 922 ARRKMLLAISELNKNRRKLFESPNA---RTSFLEGGA 955
>UNIPROTKB|F1RG08 [details] [associations]
symbol:BICC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001660 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50105
SMART:SM00322 SMART:SM00454 GO:GO:0003723 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0090090 GeneTree:ENSGT00690000102145 CTD:80114 OMA:EWSEERF
EMBL:CU407317 EMBL:CU468371 RefSeq:XP_001929158.2
Ensembl:ENSSSCT00000011170 GeneID:100154253 KEGG:ssc:100154253
Uniprot:F1RG08
Length = 894
Score = 563 (203.2 bits), Expect = 6.3e-54, P = 6.3e-54
Identities = 111/216 (51%), Positives = 149/216 (68%)
Query: 1 MKLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLER 60
+K+DVS+T+HSH+IG+GG IKKVMEETGCH+HFPDSNR+ AEKSNQVSIAG G+E
Sbjct: 55 LKMDVSHTEHSHVIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVES 114
Query: 61 ARYRVRELTPLIFCFEYPLMG---STPNANSPFVQIIQEAYNVQVMFRNRPKLQPTLVMV 117
AR R+REL PL+ FE P+ G P+ NSP +Q I + YN+ V F+ R ++ V+V
Sbjct: 115 ARVRIRELLPLVLMFELPIAGILQPVPDPNSPSIQHISQTYNISVSFKQRSRMYGATVIV 174
Query: 118 KGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQT 177
+G + + +KE T L+EH+ GSLA+ V ++I+ QHH M G N N+K IM +T
Sbjct: 175 RGSQNNTSALKEGTAMLLEHLAGSLASAIPVSTQLDIAAQHHLFMMGRNGSNIKHIMQRT 234
Query: 178 GAQIVFPEANDPIIPVLKKSSVTVSGNIDSVYLARQ 213
GAQI FP+ ++P KKS+V + G I+SV LARQ
Sbjct: 235 GAQIHFPDPSNP----QKKSTVYLQGTIESVCLARQ 266
Score = 151 (58.2 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 37/134 (27%), Positives = 67/134 (50%)
Query: 2 KLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERA 61
+LD++ H ++GR G IK +M+ TG +HFPD + N +K + V + G++ + A
Sbjct: 208 QLDIAAQHHLFMMGRNGSNIKHIMQRTGAQIHFPDPS---NPQKKSTVYLQGTIESVCLA 264
Query: 62 RYRVRELTPLIFCFEYPLMGSTPNANSPFVQIIQEAYNVQVMFRNRPKLQPTLVMVKGCE 121
R + PL+ F+ M + F+ + E +V + + +PK V+VK E
Sbjct: 265 RQYLMGCLPLVLMFD---MKEEIEVDPQFIAQLMEQLDVFISIKPKPKQPSKSVIVKSVE 321
Query: 122 KDVERVKEATTKLI 135
++ + EA L+
Sbjct: 322 RNALNMYEARKCLL 335
>UNIPROTKB|F1NFQ2 [details] [associations]
symbol:BICC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR001660 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50105
SMART:SM00322 SMART:SM00454 GO:GO:0003723 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0090090 GeneTree:ENSGT00690000102145 OMA:EWSEERF
EMBL:AADN02043583 EMBL:AADN02043584 IPI:IPI00576109
Ensembl:ENSGALT00000002863 Uniprot:F1NFQ2
Length = 872
Score = 556 (200.8 bits), Expect = 3.2e-53, P = 3.2e-53
Identities = 111/216 (51%), Positives = 148/216 (68%)
Query: 1 MKLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLER 60
+K+DVS+T+HSH+IG+GG IKKVMEETGCH+HFPDSNR+ AEKSNQVSIAG G+E
Sbjct: 33 LKMDVSHTEHSHVIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVES 92
Query: 61 ARYRVRELTPLIFCFEYPLMG---STPNANSPFVQIIQEAYNVQVMFRNRPKLQPTLVMV 117
AR R+REL PL+ FE P+ G P+ NS +Q I + YN+ V F+ R ++ V+V
Sbjct: 93 ARVRIRELLPLVLMFELPIAGILQPIPDPNSHTIQHISQTYNISVSFKQRSRMYGATVIV 152
Query: 118 KGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQT 177
+G + + VKE T L+EH+ GSLA+ V ++I+ QHH M G N N+K IM +T
Sbjct: 153 RGSQNNTSAVKEGTAMLLEHLAGSLASAIPVSTQLDIAAQHHLFMMGRNGSNIKHIMQRT 212
Query: 178 GAQIVFPEANDPIIPVLKKSSVTVSGNIDSVYLARQ 213
GAQI FP+ ++P KKS+V + G I+SV LARQ
Sbjct: 213 GAQIHFPDPSNP----QKKSTVYLQGTIESVCLARQ 244
Score = 151 (58.2 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 40/150 (26%), Positives = 73/150 (48%)
Query: 2 KLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERA 61
+LD++ H ++GR G IK +M+ TG +HFPD + N +K + V + G++ + A
Sbjct: 186 QLDIAAQHHLFMMGRNGSNIKHIMQRTGAQIHFPDPS---NPQKKSTVYLQGTIESVCLA 242
Query: 62 RYRVRELTPLIFCFEYPLMGSTPNANSPFVQIIQEAYNVQVMFRNRPKLQPTLVMVKGCE 121
R + PL+ F+ M F+ + E +V + + +PK V+VK E
Sbjct: 243 RQYLMGCLPLVLMFD---MKEEIEVEPQFITQLMEQLDVFISIKPKPKQPSKSVIVKSVE 299
Query: 122 KDVERVKEATTKLI--EHMCGSLANQTSVI 149
++ + EA L+ E ++A+ S +
Sbjct: 300 RNALNMYEARKCLLGLESSGVTIASNASTV 329
>ZFIN|ZDB-GENE-080522-3 [details] [associations]
symbol:bicc1b "bicaudal C homolog 1b (Drosophila)"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001660 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50105 SMART:SM00322
SMART:SM00454 ZFIN:ZDB-GENE-080522-3 GO:GO:0003723
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GeneTree:ENSGT00690000102145
EMBL:CABZ01087921 EMBL:CABZ01088259 EMBL:CABZ01088260
EMBL:CABZ01088261 EMBL:FP102277 IPI:IPI00864306
Ensembl:ENSDART00000103526 Bgee:E7F5S0 Uniprot:E7F5S0
Length = 892
Score = 552 (199.4 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 109/214 (50%), Positives = 148/214 (69%)
Query: 1 MKLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLER 60
+K+DVS+T+HSH+IG+GG IKKVME+TGCH+HFPDSNR+ AEKSNQVSIAG G+E
Sbjct: 55 LKMDVSHTEHSHVIGKGGNNIKKVMEDTGCHIHFPDSNRNNQAEKSNQVSIAGQPGGVEA 114
Query: 61 ARYRVRELTPLIFCFEYPLMGS-TPNANSPFVQIIQEAYNVQVMFRNRPKLQPTLVMVKG 119
AR R+REL PL+ FE P++ P+ +SP +Q I + YN+ V F+ R +L +V+G
Sbjct: 115 ARARIRELLPLVLMFELPVIVQLNPDPSSPAIQHISQTYNISVAFKQRSRLYGATGVVRG 174
Query: 120 CEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQTGA 179
+ + VK T L+EH+ G+LA+ ++ ++I+PQHH M G N N+K IM +TGA
Sbjct: 175 SQNNAAAVKRGTAVLLEHLAGNLASAITISTQLDIAPQHHLFMMGRNGSNIKHIMQRTGA 234
Query: 180 QIVFPEANDPIIPVLKKSSVTVSGNIDSVYLARQ 213
Q+ FP+ N P KKS+V V G IDSV LARQ
Sbjct: 235 QVHFPDPNCP----QKKSTVYVQGTIDSVCLARQ 264
Score = 135 (52.6 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 36/134 (26%), Positives = 64/134 (47%)
Query: 2 KLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERA 61
+LD++ H ++GR G IK +M+ TG VHFPD N +K + V + G++ + A
Sbjct: 206 QLDIAPQHHLFMMGRNGSNIKHIMQRTGAQVHFPDPNCP---QKKSTVYVQGTIDSVCLA 262
Query: 62 RYRVRELTPLIFCFEYPLMGSTPNANSPFVQIIQEAYNVQVMFRNRPKLQPTLVMVKGCE 121
R + PL+ F+ + + + E +V + + +PK V+VK E
Sbjct: 263 RQYLMGCLPLVLMFD---IKEDIEVEPQCITSLMEQLDVFISVKPKPKQPSKSVIVKSVE 319
Query: 122 KDVERVKEATTKLI 135
++ + EA L+
Sbjct: 320 RNALNMYEARRYLL 333
>MGI|MGI:1933388 [details] [associations]
symbol:Bicc1 "bicaudal C homolog 1 (Drosophila)"
species:10090 "Mus musculus" [GO:0003723 "RNA binding"
evidence=ISA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=ISO] InterPro:IPR001660
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
PROSITE:PS50105 SMART:SM00322 SMART:SM00454 MGI:MGI:1933388
GO:GO:0007275 GO:GO:0003723 Gene3D:1.10.150.50 InterPro:IPR013761
InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0090090
GeneTree:ENSGT00690000102145 CTD:80114 eggNOG:NOG259272
HOGENOM:HOG000068054 HOVERGEN:HBG058964 OMA:EWSEERF
OrthoDB:EOG40P466 EMBL:AF319464 EMBL:AK089066 EMBL:BC062174
EMBL:BC111523 IPI:IPI00117953 IPI:IPI00817039 RefSeq:NP_113574.1
UniGene:Mm.286834 UniGene:Mm.458090 HSSP:Q00341
ProteinModelPortal:Q99MQ1 SMR:Q99MQ1 STRING:Q99MQ1
PhosphoSite:Q99MQ1 PRIDE:Q99MQ1 Ensembl:ENSMUST00000131445
Ensembl:ENSMUST00000143791 GeneID:83675 KEGG:mmu:83675
UCSC:uc007fof.1 UCSC:uc007fog.1 InParanoid:Q99MQ1 NextBio:350717
Bgee:Q99MQ1 CleanEx:MM_BICC1 Genevestigator:Q99MQ1
GermOnline:ENSMUSG00000014329 Uniprot:Q99MQ1
Length = 977
Score = 552 (199.4 bits), Expect = 1.6e-52, P = 1.6e-52
Identities = 110/216 (50%), Positives = 148/216 (68%)
Query: 1 MKLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLER 60
+K+DVS+T+HSH+IG+GG IKKVME+TGCH+HFPDSNR+ AEKSNQVSIAG G+E
Sbjct: 137 LKMDVSHTEHSHVIGKGGNNIKKVMEDTGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVES 196
Query: 61 ARYRVRELTPLIFCFEYPLMG---STPNANSPFVQIIQEAYNVQVMFRNRPKLQPTLVMV 117
AR R+REL PL+ FE P+ G P+ N+P +Q I + Y+V V F+ R ++ V V
Sbjct: 197 ARARIRELLPLVLMFELPIAGILQPVPDPNTPSIQHISQTYSVSVSFKQRSRMYGATVTV 256
Query: 118 KGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQT 177
+G + + VKE T L+EH+ GSLA+ V ++I+ QHH M G N N+K IM +T
Sbjct: 257 RGSQNNTNAVKEGTAMLLEHLAGSLASAIPVSTQLDIAAQHHLFMMGRNGSNVKHIMQRT 316
Query: 178 GAQIVFPEANDPIIPVLKKSSVTVSGNIDSVYLARQ 213
GAQI FP+ ++P KKS+V + G I+SV LARQ
Sbjct: 317 GAQIHFPDPSNP----QKKSTVYLQGTIESVCLARQ 348
Score = 143 (55.4 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 35/134 (26%), Positives = 66/134 (49%)
Query: 2 KLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERA 61
+LD++ H ++GR G +K +M+ TG +HFPD + N +K + V + G++ + A
Sbjct: 290 QLDIAAQHHLFMMGRNGSNVKHIMQRTGAQIHFPDPS---NPQKKSTVYLQGTIESVCLA 346
Query: 62 RYRVRELTPLIFCFEYPLMGSTPNANSPFVQIIQEAYNVQVMFRNRPKLQPTLVMVKGCE 121
R + PL+ F+ M + + + E +V + + +PK V+VK E
Sbjct: 347 RQYLMGCLPLVLMFD---MKEDIEVDPQVIAQLMEQLDVFISIKPKPKQPSKSVIVKSVE 403
Query: 122 KDVERVKEATTKLI 135
++ + EA L+
Sbjct: 404 RNALNMYEARKCLL 417
Score = 36 (17.7 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 143 ANQTSVIMMMEISPQHHPIMEGPNA 167
A + ++ + E+S + E PNA
Sbjct: 924 ARRKMLLAISELSKNRRKLFEPPNA 948
>RGD|1307459 [details] [associations]
symbol:Bicc1 "bicaudal C homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA;ISO] InterPro:IPR001660
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
PROSITE:PS50105 SMART:SM00322 SMART:SM00454 RGD:1307459
GO:GO:0003723 Gene3D:1.10.150.50 InterPro:IPR013761
InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0090090
GeneTree:ENSGT00690000102145 CTD:80114 OrthoDB:EOG40P466
EMBL:CH473988 IPI:IPI00372850 RefSeq:NP_001102001.1
UniGene:Rn.214553 Ensembl:ENSRNOT00000000754 GeneID:361832
KEGG:rno:361832 NextBio:677763 Uniprot:D3ZDJ9
Length = 898
Score = 550 (198.7 bits), Expect = 1.8e-52, P = 1.8e-52
Identities = 109/216 (50%), Positives = 148/216 (68%)
Query: 1 MKLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLER 60
+K+DVS+T+HSH+IG+GG IKKVME+TGCH+HFPDSNR+ EKSNQVSIAG G+E
Sbjct: 55 LKMDVSHTEHSHVIGKGGNNIKKVMEDTGCHIHFPDSNRNNQVEKSNQVSIAGQPAGVES 114
Query: 61 ARYRVRELTPLIFCFEYPLMG---STPNANSPFVQIIQEAYNVQVMFRNRPKLQPTLVMV 117
AR R+REL PL+ FE P+ G P+ N+P +Q I + Y+V V F+ R ++ V+V
Sbjct: 115 ARARIRELLPLVLMFELPIAGILQPVPDPNTPSIQHISQTYSVSVSFKQRSRMYGATVIV 174
Query: 118 KGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQT 177
+G + + VKE T L+EH+ GSLA+ V ++I+ QHH M G N N+K IM +T
Sbjct: 175 RGSQNNTNAVKEGTAMLLEHLAGSLASAIPVSTQLDIAAQHHLFMMGRNGSNVKHIMQRT 234
Query: 178 GAQIVFPEANDPIIPVLKKSSVTVSGNIDSVYLARQ 213
GAQI FP+ ++P KKS+V + G I+SV LARQ
Sbjct: 235 GAQIHFPDPSNP----QKKSTVYLQGTIESVCLARQ 266
Score = 144 (55.7 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 35/134 (26%), Positives = 67/134 (50%)
Query: 2 KLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERA 61
+LD++ H ++GR G +K +M+ TG +HFPD + N +K + V + G++ + A
Sbjct: 208 QLDIAAQHHLFMMGRNGSNVKHIMQRTGAQIHFPDPS---NPQKKSTVYLQGTIESVCLA 264
Query: 62 RYRVRELTPLIFCFEYPLMGSTPNANSPFVQIIQEAYNVQVMFRNRPKLQPTLVMVKGCE 121
R + PL+ F+ M + + + + E +V + + +PK V+VK E
Sbjct: 265 RQYLMGCLPLVLMFD---MKEDIDVDPQVITQLMEQLDVFISIKPKPKQPSKSVIVKSVE 321
Query: 122 KDVERVKEATTKLI 135
++ + EA L+
Sbjct: 322 RNALNMYEARKCLL 335
>ZFIN|ZDB-GENE-110110-3 [details] [associations]
symbol:bicc2 "bicaudal C homolog 2" species:7955
"Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001660 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50105 SMART:SM00322
SMART:SM00454 ZFIN:ZDB-GENE-110110-3 GO:GO:0003723
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GeneTree:ENSGT00690000102145
EMBL:CU468924 IPI:IPI00934064 Ensembl:ENSDART00000031211
OMA:EFFERVM Bgee:F1Q505 Uniprot:F1Q505
Length = 849
Score = 443 (161.0 bits), Expect = 6.2e-41, P = 6.2e-41
Identities = 92/217 (42%), Positives = 135/217 (62%)
Query: 1 MKLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNA-EKSNQVSIAGSLLGLE 59
+K+DV++T+HSH+IG+GG IKKVMEET CH+HFPDSNRS ++ EKSNQVSIAG + G+E
Sbjct: 139 LKMDVTHTEHSHVIGKGGGNIKKVMEETSCHIHFPDSNRSNSSGEKSNQVSIAGPVEGVE 198
Query: 60 RARYRVRELTPLIFCFEYPLM---GSTPNANSPFVQIIQEAYNVQVMFRNRPKLQPTLVM 116
AR ++R+L PL+ F+ P+ G + +SP +Q + +A+ V V FR +PKL +
Sbjct: 199 SARKQIRDLQPLVLTFDLPVTLVGGVVADTSSPVIQHVAQAFGVTVSFRTQPKLYCSTCS 258
Query: 117 VKGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQ 176
V+G + +K+A L+E + GS N V ++++ Q H + G N N T+M Q
Sbjct: 259 VRGVTANTAALKKAICVLMELLLGSGVNGVMVSTQLDVTSQQHLFLLGQNGANFLTVMHQ 318
Query: 177 TGAQIVFPEANDPIIPVLKKSSVTVSGNIDSVYLARQ 213
T QI+ P+ + P S+ + G D V LARQ
Sbjct: 319 THTQIILPDLSSP----QHTPSLLIQGTADGVCLARQ 351
Score = 115 (45.5 bits), Expect = 0.00068, P = 0.00068
Identities = 44/182 (24%), Positives = 83/182 (45%)
Query: 2 KLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERA 61
+LDV+ H ++G+ G VM +T + PD + + + + + I G+ G+ A
Sbjct: 293 QLDVTSQQHLFLLGQNGANFLTVMHQTHTQIILPDLS---SPQHTPSLLIQGTADGVCLA 349
Query: 62 RYRVRELTPLIFCFEYPLMGSTPNANSPFVQIIQEAYNVQVMFRNRPKLQPTL--VMVKG 119
R ++ + P+ F+ G F Q++Q N+ V +PK++ T V+VKG
Sbjct: 350 RQQLMDCLPVCLMFDLKDEGELDPRR--FTQMMQ---NLGVFISVKPKVKQTAKSVVVKG 404
Query: 120 CEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHH--PIMEGPNAIN---LKTIM 174
E+++ V EA L+ ++ T + + + +H P++ N I L +M
Sbjct: 405 LERNIVNVYEARRLLLGLDSTEVSVSTKSVCEVSVMSKHSVDPLLAN-NGITGYWLNVLM 463
Query: 175 AQ 176
Q
Sbjct: 464 QQ 465
>WB|WBGene00000246 [details] [associations]
symbol:bcc-1 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR001660 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50105 SMART:SM00322
SMART:SM00454 GO:GO:0009792 GO:GO:0003723 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GeneTree:ENSGT00690000102145 EMBL:Z68337 RefSeq:NP_502067.2
ProteinModelPortal:Q21593 SMR:Q21593 MINT:MINT-3386004 PaxDb:Q21593
EnsemblMetazoa:M7.3 GeneID:178008 KEGG:cel:CELE_M7.3 UCSC:M7.3
CTD:178008 WormBase:M7.3 eggNOG:NOG321140 HOGENOM:HOG000017986
InParanoid:Q21593 OMA:PDSNKYS NextBio:899342 Uniprot:Q21593
Length = 644
Score = 186 (70.5 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 34/78 (43%), Positives = 55/78 (70%)
Query: 1 MKLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLER 60
+K+++ ++ HSHIIG+GG I+KVM+ T CH+HFPDSN+ ++ KS+QVSI+G+ + +
Sbjct: 106 LKMELHHSLHSHIIGKGGRGIQKVMKMTSCHIHFPDSNKYSDSNKSDQVSISGTPVNVFE 165
Query: 61 ARYRVRELTPLIFCFEYP 78
A +R + PL + P
Sbjct: 166 ALKHLRSMCPLTVYMKLP 183
>ZFIN|ZDB-GENE-030131-6822 [details] [associations]
symbol:wu:fa07b03 "wu:fa07b03" species:7955 "Danio
rerio" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
ZFIN:ZDB-GENE-030131-6822 GO:GO:0003723
GeneTree:ENSGT00690000102206 EMBL:AL929346 IPI:IPI00485868
Ensembl:ENSDART00000128279 ArrayExpress:E7FCA5 Bgee:E7FCA5
Uniprot:E7FCA5
Length = 1259
Score = 177 (67.4 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 57/212 (26%), Positives = 103/212 (48%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRS-----VNAEKSNQVSIAGSLLGLERARYR 64
H +IIG+GG IKK+ EET + P N + + +KSN + +L +E+
Sbjct: 590 HKNIIGKGGANIKKIREETNTKIDLPTENSNSEVIVITGKKSNCEAARERILAIEKELAS 649
Query: 65 VRELTPLIFC-FEYPLMGSTPNANSPFVQIIQEAYNVQVMFRNRPKLQPTL--VMVKGCE 121
++E+ I L+GS S I+++ V + F P L V ++G
Sbjct: 650 MKEVEVSIPAKLHNSLIGSK---GSLVRSIMEDCGGVHIHF---PAEGSGLDRVTIRGPA 703
Query: 122 KDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQTGAQI 181
++VER ++ +L E N SV ++ P++H + G N++ + +TGA+I
Sbjct: 704 EEVERARKQLLQLAEE---KQVNNFSV--ELQAKPEYHKYLIGRGGANIRRVRDRTGARI 758
Query: 182 VFPEANDPIIPVLKKSSVTVSGNIDSVYLARQ 213
+FP A+D ++ +T+ G ++V LA++
Sbjct: 759 IFPSADDQ-----EQEHITIMGKEEAVILAQR 785
Score = 118 (46.6 bits), Expect = 0.00049, P = 0.00049
Identities = 50/190 (26%), Positives = 90/190 (47%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERARYRVRELT 69
H ++IGRGG I++V + TG + FP S + ++ ++I G + A+ REL
Sbjct: 736 HKYLIGRGGANIRRVRDRTGARIIFP----SADDQEQEHITIMGKEEAVILAQ---RELE 788
Query: 70 PLIFCFEYPLMGST---PNANSPFV----QIIQEA---YN-VQVMFRNRPKLQPTLVMVK 118
LI + + S P + FV Q+++E Y V V F R + +K
Sbjct: 789 TLIKNLDDVIEDSMIVEPRHHRHFVCRRGQVLRELAEEYGGVAVSFP-RTGTHSDSITLK 847
Query: 119 GCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQTG 178
G + V+ K+ ++ E +C L +Q S+ ++ I ++H + GP ++ I +
Sbjct: 848 GPRECVDAAKK---RIQEIVC-DLESQVSMEVL--IPQRYHRAIMGPKGCRIQQITREHE 901
Query: 179 AQIVFPEAND 188
QI FP+ ++
Sbjct: 902 VQIKFPDRDE 911
Score = 118 (46.6 bits), Expect = 0.00049, P = 0.00049
Identities = 55/225 (24%), Positives = 103/225 (45%)
Query: 3 LDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERAR 62
++VSY H +IIG+ G I+K+ME+ ++ P ++S+ + I G + +ERA+
Sbjct: 961 VEVSYDLHRYIIGQKGSGIRKMMEDYEVNIWVPQPE-----QQSDIIKITGQVASVERAK 1015
Query: 63 Y----RVRELTP-----LIFCFEYPLMGST---PNA---NSPFVQIIQEAYNVQVMFRNR 107
+ RV+EL + ++ L P + I++ Y+V V F ++
Sbjct: 1016 HGLLDRVKELQAEQEDRALRSYKVTLSVDPKYHPKIIGRKGAVISQIRKEYDVNVQFPDK 1075
Query: 108 PKLQPTLVMVKGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNA 167
Q ++++ G E++ K A IE + +L Q V + + + H + G
Sbjct: 1076 GDEQQDVIVISGYERNANDAKSA----IEQLVAAL--QEMVSEDVRLDRRVHARIIGARG 1129
Query: 168 INLKTIMAQTGAQIVFPE--ANDPIIPVLKKSSVTVSG---NIDS 207
++ IM + I FP+ + DP + VTV+G N+D+
Sbjct: 1130 KAIRKIMEEFKVDIRFPQPGSEDP-------NKVTVTGLPENVDN 1167
>UNIPROTKB|E1C3A9 [details] [associations]
symbol:HDLBP "Vigilin" species:9031 "Gallus gallus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005737 GO:GO:0003723
GeneTree:ENSGT00690000102206 OMA:YEKNTEA EMBL:AADN02024240
EMBL:AADN02024241 EMBL:AADN02024242 EMBL:AADN02024243
IPI:IPI00820163 Ensembl:ENSGALT00000009355 ArrayExpress:E1C3A9
Uniprot:E1C3A9
Length = 1267
Score = 172 (65.6 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 58/213 (27%), Positives = 97/213 (45%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERARYRV---- 65
H +IIG+GG IKK+ EE+ + P N + S + I G E AR+R+
Sbjct: 592 HKNIIGKGGANIKKIREESNTKIDLPAENSN-----SETIVITGKRANCEAARHRILAIQ 646
Query: 66 REL---TPLIFCFEYPLMGSTPNANSPFVQ-IIQEAYNVQVMFRNRPKLQPTLVMVKGCE 121
+EL T + L S A F++ I++E V + F T V ++G
Sbjct: 647 KELANITEVEVSIPSKLHNSLIGAKGRFIRSIMEECGGVHIHFPTEGSGSDT-VTIRGPA 705
Query: 122 KDVERVKEATTKLIEHMCGSLANQT-SVIMMMEISPQHHPIMEGPNAINLKTIMAQTGAQ 180
+DVE+ K+ L E QT S + + P++H + G N++ + TGA+
Sbjct: 706 QDVEKAKKQLLHLAEE------KQTKSYTVDLRAKPEYHKFLIGKGGGNIRKVRDNTGAR 759
Query: 181 IVFPEANDPIIPVLKKSSVTVSGNIDSVYLARQ 213
I+FP + D + +T+ G ++V A++
Sbjct: 760 IIFPTSEDK-----DQELITIMGTEEAVKEAQK 787
Score = 129 (50.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 56/196 (28%), Positives = 87/196 (44%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERA-RYRVREL 68
H +IG+GG I+KV + TG + FP S E +Q I +++G E A + +EL
Sbjct: 738 HKFLIGKGGGNIRKVRDNTGARIIFPTS------EDKDQELI--TIMGTEEAVKEAQKEL 789
Query: 69 TPLIFCFEYPLMGST---PNANSPFV----QIIQEA---YN-VQVMFRNRPKLQPTLVMV 117
LI + + S P + FV Q+++E Y V V F R Q V +
Sbjct: 790 EALIKNLDNVVEDSMVVDPKHHRHFVIRRGQVLREIADEYGGVMVSFP-RSGTQSDKVTL 848
Query: 118 KGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQT 177
KG + VE K+ ++IE + + V + I + H + GP ++ I
Sbjct: 849 KGAKDCVEAAKKRIQEIIEDL------EAQVTIECTIPQKFHRSIMGPKGSRIQQITRDY 902
Query: 178 GAQIVFPEANDPIIPV 193
G QI FP+ + PV
Sbjct: 903 GVQIKFPDREENPAPV 918
Score = 121 (47.7 bits), Expect = 0.00022, P = 0.00022
Identities = 45/194 (23%), Positives = 85/194 (43%)
Query: 2 KLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERA 61
+++V + H H+IG+ G I ++ + V P N EKSN + I G G+++A
Sbjct: 438 EINVDHKFHRHLIGKNGANINRIKDLYKVSVRIPPDN-----EKSNLIRIEGDPQGVQQA 492
Query: 62 RYRVRELTPLI-------FCFEYPLMGSTPNANSPFVQIIQEAY-NVQVMFRNRPKLQPT 113
+ + EL + E + ++ I+E + V + F + P +
Sbjct: 493 KKELLELASRMENERTKDLIIEQKFHRTIIGQKGERIREIREKFPEVIINFPD-PAHKSD 551
Query: 114 LVMVKGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTI 173
+V ++G + +VE+ TK ++ M L + S + + I Q H + G N+K I
Sbjct: 552 IVQLRGPKNEVEKC----TKYMQKMVADLV-ENSFSISVPIFKQFHKNIIGKGGANIKKI 606
Query: 174 MAQTGAQIVFPEAN 187
++ +I P N
Sbjct: 607 REESNTKIDLPAEN 620
>ZFIN|ZDB-GENE-030131-2032 [details] [associations]
symbol:hdlbp "high density lipoprotein-binding
protein (vigilin)" species:7955 "Danio rerio" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0042221 "response to chemical stimulus"
evidence=IDA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 ZFIN:ZDB-GENE-030131-2032
GO:GO:0042221 GO:GO:0003723 GeneTree:ENSGT00690000102206
EMBL:BX957353 IPI:IPI00771212 Ensembl:ENSDART00000055771
ArrayExpress:E7F9M4 Bgee:E7F9M4 Uniprot:E7F9M4
Length = 1285
Score = 159 (61.0 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 53/188 (28%), Positives = 84/188 (44%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERARYRV---- 65
H +IIG+GG IKK+ EET + P N + S + I G E A+ R+
Sbjct: 599 HKNIIGKGGANIKKIREETNTKIDLPAENSN-----SEMIVITGKKANCEAAKNRILAIQ 653
Query: 66 REL---TPLIFCFEYPLMGSTPNANSPFVQ-IIQEAYNVQVMFRNRPKLQPTLVMVKGCE 121
+EL T + L S + FV+ I++E V + F V ++G
Sbjct: 654 KELANITEVEVSIPSKLHNSLIGSKGRFVRSIMEECGGVHIHFPTEGS-GIDAVTIRGPA 712
Query: 122 KDVERVKEATTKLIEHMCGSLANQT-SVIMMMEISPQHHPIMEGPNAINLKTIMAQTGAQ 180
++VE+ K+ L E QT S + + P++H + G N++ + TGA+
Sbjct: 713 EEVEKAKKQLLSLAEE------KQTKSHTVELRAKPEYHKFLIGKGGGNIRKVRDSTGAR 766
Query: 181 IVFPEAND 188
I+FP A D
Sbjct: 767 IIFPTAED 774
>FB|FBgn0027835 [details] [associations]
symbol:Dp1 "Dodeca-satellite-binding protein 1" species:7227
"Drosophila melanogaster" [GO:0005701 "polytene chromosome
chromocenter" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0000792 "heterochromatin" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA;TAS] [GO:0003696
"satellite DNA binding" evidence=IDA] [GO:0007059 "chromosome
segregation" evidence=IMP] [GO:0030261 "chromosome condensation"
evidence=IMP] [GO:0031507 "heterochromatin assembly" evidence=IDA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0003730 "mRNA 3'-UTR
binding" evidence=IDA] [GO:0045727 "positive regulation of
translation" evidence=IDA] [GO:0030529 "ribonucleoprotein complex"
evidence=IDA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
Pfam:PF13014 PROSITE:PS50084 SMART:SM00322 EMBL:AE013599
GO:GO:0005634 GO:GO:0007059 GO:GO:0005811 GO:GO:0003730
GO:GO:0003697 GO:GO:0030529 GO:GO:0030261 GO:GO:0045727
GO:GO:0000792 GO:GO:0031507 GO:GO:0003696 GO:GO:0005701
eggNOG:NOG313207 GeneTree:ENSGT00690000102206 OMA:YEKNTEA
EMBL:AF132179 RefSeq:NP_523781.2 RefSeq:NP_725785.1
RefSeq:NP_725786.1 RefSeq:NP_725787.1 RefSeq:NP_995885.1
RefSeq:NP_995886.1 UniGene:Dm.7368 SMR:Q7KN75 IntAct:Q7KN75
EnsemblMetazoa:FBtr0086678 EnsemblMetazoa:FBtr0086679
EnsemblMetazoa:FBtr0086680 EnsemblMetazoa:FBtr0086681
EnsemblMetazoa:FBtr0086682 EnsemblMetazoa:FBtr0086683 GeneID:37116
KEGG:dme:Dmel_CG5170 UCSC:CG5170-RA CTD:37116 FlyBase:FBgn0027835
InParanoid:Q7KN75 OrthoDB:EOG46HDRJ GenomeRNAi:37116 NextBio:802006
Uniprot:Q7KN75
Length = 1301
Score = 153 (58.9 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 54/212 (25%), Positives = 94/212 (44%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERARYRVR--- 66
H +IG+GG IKK+ +ET + P + + + I G + A+ R++
Sbjct: 608 HKFVIGKGGANIKKIRDETQTKIDLP-----AEGDTNEVIVITGKKENVLEAKERIQKIQ 662
Query: 67 -ELTPLIFC-FEYP--LMGSTPNANSPFVQ-IIQEAYNVQVMFRNRPKLQPTLVMVKGCE 121
EL+ ++ + P S + I++E V + F N + V ++G +
Sbjct: 663 NELSDIVTEEVQIPPKYYNSIIGTGGKLISSIMEECGGVSIKFPNSDS-KSDKVTIRGPK 721
Query: 122 KDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQTGAQI 181
DVE+ K +L LA+ T+ + + QHH + G N +++ I TGA+I
Sbjct: 722 DDVEKAKVQLLELANER--QLASFTAEVRAKQ---QHHKFLIGKNGASIRKIRDATGARI 776
Query: 182 VFPEANDPIIPVLKKSSVTVSGNIDSVYLARQ 213
+FP D K +T+ G +SV AR+
Sbjct: 777 IFPSNEDT-----DKEVITIIGKEESVKKARE 803
Score = 125 (49.1 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 48/214 (22%), Positives = 92/214 (42%)
Query: 10 HSHIIGRGGLTIKKVMEETG-CHVHFPDSNRSVNAEKSNQVSIAGSLLGLERARYRVREL 68
++ IIG GG I +MEE G + FP+S+ KS++V+I G +E+A+ ++ EL
Sbjct: 680 YNSIIGTGGKLISSIMEECGGVSIKFPNSD-----SKSDKVTIRGPKDDVEKAKVQLLEL 734
Query: 69 TP--LIFCFEYPLMGSTPN------ANSPFVQIIQEAYNVQVMFRNRPKLQPTLVMVKGC 120
+ F + + N ++ I++A +++F + ++ + G
Sbjct: 735 ANERQLASFTAEVRAKQQHHKFLIGKNGASIRKIRDATGARIIFPSNEDTDKEVITIIGK 794
Query: 121 EKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQTGAQ 180
E+ V++ +E +I+ C + + + P+HH L I + G
Sbjct: 795 EESVKKAREQLEAIIKE-CDEVTEGE-----VSVDPKHHKHFVAKRGFILHRISEECGGV 848
Query: 181 IV-FPEANDPIIPVLKKSSVTVSGNIDSVYLARQ 213
++ FP + VT+ G D + ARQ
Sbjct: 849 MISFPRVG------INSDKVTIKGAKDCIEAARQ 876
Score = 121 (47.7 bits), Expect = 0.00022, P = 0.00022
Identities = 46/193 (23%), Positives = 88/193 (45%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERARYRVRELT 69
H +IG+ G +I+K+ + TG + FP SN + E ++I G +++AR ++ +
Sbjct: 754 HKFLIGKNGASIRKIRDATGARIIFP-SNEDTDKEV---ITIIGKEESVKKAREQLEAI- 808
Query: 70 PLIFCFEYPL--MGSTPNANSPFV--------QIIQEAYNVQVMFRNRPKLQPTLVMVKG 119
+ C E + P + FV +I +E V + F R + V +KG
Sbjct: 809 -IKECDEVTEGEVSVDPKHHKHFVAKRGFILHRISEECGGVMISFP-RVGINSDKVTIKG 866
Query: 120 CEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQTGA 179
+ +E ++ IE + L QT++ ++ I +HH + G ++ + +
Sbjct: 867 AKDCIEAARQR----IEEIVADLEAQTTIEVV--IPQRHHRTIMGARGFKVQQVTFEFDV 920
Query: 180 QIVFPE--ANDPI 190
QI FP+ A +P+
Sbjct: 921 QIKFPDRDATEPV 933
>UNIPROTKB|E2RNS5 [details] [associations]
symbol:HDLBP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00690000102206
EMBL:AAEX03014560 Ensembl:ENSCAFT00000038084 Uniprot:E2RNS5
Length = 1177
Score = 152 (58.6 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 52/211 (24%), Positives = 94/211 (44%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRS-----VNAEKSNQVSIAGSLLGLERARYR 64
H +IIG+GG IKK+ EE+ + P N + + +++N + +L +++
Sbjct: 502 HKNIIGKGGANIKKIREESNTKIDLPAENSNSETIIITGKRANCEAARSRILSIQKDLAN 561
Query: 65 VRELTPLIFCFEYPLMGSTPNANSPFVQ-IIQEAYNVQVMFRNRPKLQPTLVMVKGCEKD 123
+ EL I L S ++ I++E V + F T+V ++G D
Sbjct: 562 IAELEVSI---PAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSDTVV-IRGPASD 617
Query: 124 VERVKEATTKLIEHMCGSLANQT-SVIMMMEISPQHHPIMEGPNAINLKTIMAQTGAQIV 182
VE+ K+ L E QT S + + P++H + G ++ + TGA+I+
Sbjct: 618 VEKAKKQLLHLAEE------KQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDNTGARII 671
Query: 183 FPEANDPIIPVLKKSSVTVSGNIDSVYLARQ 213
FP A D + +T+ G D+V A++
Sbjct: 672 FPTAEDK-----DQDLITIIGKEDAVREAQK 697
Score = 120 (47.3 bits), Expect = 0.00026, P = 0.00026
Identities = 43/195 (22%), Positives = 88/195 (45%)
Query: 1 MKLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLER 60
++++V + H H+IG+ G I ++ ++ V P ++EKSN + I G G+++
Sbjct: 347 VEINVDHKFHRHLIGKSGANINRIKDQYKVSVRIPP-----DSEKSNLIRIEGDPQGVQQ 401
Query: 61 ARYRVRELTPLI-------FCFEYPLMGSTPNANSPFVQIIQEAY-NVQVMFRNRPKLQP 112
A+ + EL + E + ++ I++ + V + F + P +
Sbjct: 402 AKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPD-PAQKS 460
Query: 113 TLVMVKGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKT 172
+V ++G + +VE+ TK ++ M L + S + + I Q H + G N+K
Sbjct: 461 DIVQLRGPKNEVEKC----TKYMQKMVADLV-ENSYSISVPIFKQFHKNIIGKGGANIKK 515
Query: 173 IMAQTGAQIVFPEAN 187
I ++ +I P N
Sbjct: 516 IREESNTKIDLPAEN 530
Score = 116 (45.9 bits), Expect = 0.00076, P = 0.00076
Identities = 55/194 (28%), Positives = 86/194 (44%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERA-RYRVREL 68
H +IG+GG I+KV + TG + FP AE +Q I +++G E A R +EL
Sbjct: 648 HKFLIGKGGGKIRKVRDNTGARIIFP------TAEDKDQDLI--TIIGKEDAVREAQKEL 699
Query: 69 TPLIFCFEYPL---MGSTPNANSPFV----QIIQEA---YN-VQVMFRNRPKLQPTLVMV 117
LI + + M P + FV Q+++E Y V V F R Q V +
Sbjct: 700 EALIQNLDNVVEDCMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFP-RSGTQSDKVTL 758
Query: 118 KGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQT 177
KG + VE K+ ++IE + + V + I + H + GP ++ I
Sbjct: 759 KGAKDCVEAAKKRIQEIIEDL------EAQVTIECAIPQKFHRSVMGPKGSRIQQITRDY 812
Query: 178 GAQIVFPEAND-PI 190
QI FP+ + P+
Sbjct: 813 NVQIKFPDREENPV 826
>UNIPROTKB|E2RET1 [details] [associations]
symbol:HDLBP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005737
GO:GO:0003723 GeneTree:ENSGT00690000102206 OMA:YEKNTEA
EMBL:AAEX03014560 Ensembl:ENSCAFT00000020547 NextBio:20852909
Uniprot:E2RET1
Length = 1268
Score = 152 (58.6 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 52/211 (24%), Positives = 94/211 (44%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRS-----VNAEKSNQVSIAGSLLGLERARYR 64
H +IIG+GG IKK+ EE+ + P N + + +++N + +L +++
Sbjct: 593 HKNIIGKGGANIKKIREESNTKIDLPAENSNSETIIITGKRANCEAARSRILSIQKDLAN 652
Query: 65 VRELTPLIFCFEYPLMGSTPNANSPFVQ-IIQEAYNVQVMFRNRPKLQPTLVMVKGCEKD 123
+ EL I L S ++ I++E V + F T+V ++G D
Sbjct: 653 IAELEVSI---PAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSDTVV-IRGPASD 708
Query: 124 VERVKEATTKLIEHMCGSLANQT-SVIMMMEISPQHHPIMEGPNAINLKTIMAQTGAQIV 182
VE+ K+ L E QT S + + P++H + G ++ + TGA+I+
Sbjct: 709 VEKAKKQLLHLAEE------KQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDNTGARII 762
Query: 183 FPEANDPIIPVLKKSSVTVSGNIDSVYLARQ 213
FP A D + +T+ G D+V A++
Sbjct: 763 FPTAEDK-----DQDLITIIGKEDAVREAQK 788
Score = 120 (47.3 bits), Expect = 0.00029, P = 0.00029
Identities = 43/195 (22%), Positives = 88/195 (45%)
Query: 1 MKLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLER 60
++++V + H H+IG+ G I ++ ++ V P ++EKSN + I G G+++
Sbjct: 438 VEINVDHKFHRHLIGKSGANINRIKDQYKVSVRIPP-----DSEKSNLIRIEGDPQGVQQ 492
Query: 61 ARYRVRELTPLI-------FCFEYPLMGSTPNANSPFVQIIQEAY-NVQVMFRNRPKLQP 112
A+ + EL + E + ++ I++ + V + F + P +
Sbjct: 493 AKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPD-PAQKS 551
Query: 113 TLVMVKGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKT 172
+V ++G + +VE+ TK ++ M L + S + + I Q H + G N+K
Sbjct: 552 DIVQLRGPKNEVEKC----TKYMQKMVADLV-ENSYSISVPIFKQFHKNIIGKGGANIKK 606
Query: 173 IMAQTGAQIVFPEAN 187
I ++ +I P N
Sbjct: 607 IREESNTKIDLPAEN 621
Score = 116 (45.9 bits), Expect = 0.00083, P = 0.00083
Identities = 55/194 (28%), Positives = 86/194 (44%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERA-RYRVREL 68
H +IG+GG I+KV + TG + FP AE +Q I +++G E A R +EL
Sbjct: 739 HKFLIGKGGGKIRKVRDNTGARIIFP------TAEDKDQDLI--TIIGKEDAVREAQKEL 790
Query: 69 TPLIFCFEYPL---MGSTPNANSPFV----QIIQEA---YN-VQVMFRNRPKLQPTLVMV 117
LI + + M P + FV Q+++E Y V V F R Q V +
Sbjct: 791 EALIQNLDNVVEDCMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFP-RSGTQSDKVTL 849
Query: 118 KGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQT 177
KG + VE K+ ++IE + + V + I + H + GP ++ I
Sbjct: 850 KGAKDCVEAAKKRIQEIIEDL------EAQVTIECAIPQKFHRSVMGPKGSRIQQITRDY 903
Query: 178 GAQIVFPEAND-PI 190
QI FP+ + P+
Sbjct: 904 NVQIKFPDREENPV 917
>MGI|MGI:99256 [details] [associations]
symbol:Hdlbp "high density lipoprotein (HDL) binding protein"
species:10090 "Mus musculus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006629 "lipid metabolic process"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006869
"lipid transport" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008202 "steroid metabolic process" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0034364 "high-density lipoprotein particle" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 MGI:MGI:99256 GO:GO:0005634 GO:GO:0005737
GO:GO:0006869 GO:GO:0008203 GO:GO:0003723 GO:GO:0034364
eggNOG:NOG313207 GeneTree:ENSGT00690000102206 CTD:3069
HOGENOM:HOG000007687 HOVERGEN:HBG054107 OMA:YEKNTEA
OrthoDB:EOG4M65GT ChiTaRS:HDLBP EMBL:BC021765 EMBL:BC023806
EMBL:BC025648 EMBL:BC027779 EMBL:BC027788 EMBL:BC035301
IPI:IPI00123379 RefSeq:NP_598569.1 UniGene:Mm.30012
ProteinModelPortal:Q8VDJ3 SMR:Q8VDJ3 STRING:Q8VDJ3
PhosphoSite:Q8VDJ3 PaxDb:Q8VDJ3 PRIDE:Q8VDJ3
Ensembl:ENSMUST00000042498 Ensembl:ENSMUST00000170883 GeneID:110611
KEGG:mmu:110611 InParanoid:Q8VDJ3 NextBio:364327 Bgee:Q8VDJ3
CleanEx:MM_HDLBP Genevestigator:Q8VDJ3
GermOnline:ENSMUSG00000034088 Uniprot:Q8VDJ3
Length = 1268
Score = 150 (57.9 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 56/213 (26%), Positives = 93/213 (43%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERARYRV---- 65
H +IIG+GG IKK+ EE+ + P N + S + I G E AR R+
Sbjct: 593 HKNIIGKGGANIKKIREESNTKIDLPAENSN-----SETIIITGKRANCEAARSRILSIQ 647
Query: 66 RELTPLIFC-FEYP--LMGSTPNANSPFVQ-IIQEAYNVQVMFRNRPKLQPTLVMVKGCE 121
++L + P L S ++ I++E V + F T+V ++G
Sbjct: 648 KDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSDTVV-IRGPS 706
Query: 122 KDVERVKEATTKLIEHMCGSLANQT-SVIMMMEISPQHHPIMEGPNAINLKTIMAQTGAQ 180
DVE+ K+ L E QT S + + P++H + G ++ + TGA+
Sbjct: 707 SDVEKAKKQLLHLAEE------KQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGAR 760
Query: 181 IVFPEANDPIIPVLKKSSVTVSGNIDSVYLARQ 213
I+FP A D + +T+ G D+V A++
Sbjct: 761 IIFPAAEDK-----DQDLITIIGKEDAVREAQK 788
Score = 119 (46.9 bits), Expect = 0.00037, P = 0.00037
Identities = 42/195 (21%), Positives = 88/195 (45%)
Query: 1 MKLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLER 60
+++++ + H H+IG+ G I ++ ++ V P ++EKSN + I G G+++
Sbjct: 438 VEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPP-----DSEKSNLIRIEGDPQGVQQ 492
Query: 61 ARYRVRELTPLI-------FCFEYPLMGSTPNANSPFVQIIQEAY-NVQVMFRNRPKLQP 112
A+ + EL + E + ++ I++ + V + F + P +
Sbjct: 493 AKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPD-PAQKS 551
Query: 113 TLVMVKGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKT 172
+V ++G + +VE+ TK ++ M L + S + + I Q H + G N+K
Sbjct: 552 DIVQLRGPKNEVEKC----TKYMQKMVADLV-ENSYSISVPIFKQFHKNIIGKGGANIKK 606
Query: 173 IMAQTGAQIVFPEAN 187
I ++ +I P N
Sbjct: 607 IREESNTKIDLPAEN 621
Score = 118 (46.6 bits), Expect = 0.00049, P = 0.00049
Identities = 59/208 (28%), Positives = 93/208 (44%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERA-RYRVREL 68
H +IG+GG I+KV + TG + FP AE +Q I +++G E A R +EL
Sbjct: 739 HKFLIGKGGGKIRKVRDSTGARIIFPA------AEDKDQDLI--TIIGKEDAVREAQKEL 790
Query: 69 TPLIFCFEYPL---MGSTPNANSPFV----QIIQEA---YN-VQVMFRNRPKLQPTLVMV 117
LI E + M P + FV Q+++E Y V V F R Q V +
Sbjct: 791 EALIQNLENVVEDYMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFP-RSGTQSDKVTL 849
Query: 118 KGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQT 177
KG + VE K+ ++IE + + V + I + H + GP ++ I
Sbjct: 850 KGAKDCVEAAKKRIQEIIEDL------EAQVTVECAIPQKFHRSVMGPKGSRIQQITRDY 903
Query: 178 GAQIVFPEAND-PIIPVLKKSSVTVSGN 204
QI FP+ + P+ V + S+ +G+
Sbjct: 904 NVQIKFPDREENPVHSV--EPSIQENGD 929
>RGD|620962 [details] [associations]
symbol:Hdlbp "high density lipoprotein binding protein"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006869 "lipid transport"
evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0034364 "high-density lipoprotein particle"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 RGD:620962 GO:GO:0005634
GO:GO:0005737 GO:GO:0006869 GO:GO:0008203 GO:GO:0003723
GO:GO:0034364 eggNOG:NOG313207 HOGENOM:HOG000007687
HOVERGEN:HBG054107 OrthoDB:EOG4M65GT EMBL:U90725 IPI:IPI00208598
UniGene:Rn.8515 ProteinModelPortal:Q9Z1A6 SMR:Q9Z1A6 IntAct:Q9Z1A6
PhosphoSite:Q9Z1A6 PRIDE:Q9Z1A6 UCSC:RGD:620962 InParanoid:Q9Z1A6
ArrayExpress:Q9Z1A6 Genevestigator:Q9Z1A6
GermOnline:ENSRNOG00000031479 Uniprot:Q9Z1A6
Length = 1268
Score = 150 (57.9 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 56/213 (26%), Positives = 93/213 (43%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERARYRV---- 65
H +IIG+GG IKK+ EE+ + P N + S + I G E AR R+
Sbjct: 593 HKNIIGKGGANIKKIREESNTKIDLPAENSN-----SETIVITGKRANCEAARSRILSIQ 647
Query: 66 RELTPLIFC-FEYP--LMGSTPNANSPFVQ-IIQEAYNVQVMFRNRPKLQPTLVMVKGCE 121
++L + P L S ++ I++E V + F T+V ++G
Sbjct: 648 KDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSDTVV-IRGPS 706
Query: 122 KDVERVKEATTKLIEHMCGSLANQT-SVIMMMEISPQHHPIMEGPNAINLKTIMAQTGAQ 180
DVE+ K+ L E QT S + + P++H + G ++ + TGA+
Sbjct: 707 SDVEKAKKQLLHLAEE------KQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGAR 760
Query: 181 IVFPEANDPIIPVLKKSSVTVSGNIDSVYLARQ 213
I+FP A D + +T+ G D+V A++
Sbjct: 761 IIFPAAEDK-----DQDLITIIGKEDAVREAQK 788
Score = 119 (46.9 bits), Expect = 0.00037, P = 0.00037
Identities = 42/195 (21%), Positives = 88/195 (45%)
Query: 1 MKLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLER 60
+++++ + H H+IG+ G I ++ ++ V P ++EKSN + I G G+++
Sbjct: 438 VEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPP-----DSEKSNLIRIEGDPQGVQQ 492
Query: 61 ARYRVRELTPLI-------FCFEYPLMGSTPNANSPFVQIIQEAY-NVQVMFRNRPKLQP 112
A+ + EL + E + ++ I++ + V + F + P +
Sbjct: 493 AKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPD-PAQKS 551
Query: 113 TLVMVKGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKT 172
+V ++G + +VE+ TK ++ M L + S + + I Q H + G N+K
Sbjct: 552 EIVQLRGPKNEVEKC----TKYMQKMVADLV-ENSYSISVPIFKQFHKNIIGKGGANIKK 606
Query: 173 IMAQTGAQIVFPEAN 187
I ++ +I P N
Sbjct: 607 IREESNTKIDLPAEN 621
Score = 116 (45.9 bits), Expect = 0.00083, P = 0.00083
Identities = 58/208 (27%), Positives = 93/208 (44%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERA-RYRVREL 68
H +IG+GG I+KV + TG + FP AE +Q I +++G E A R +EL
Sbjct: 739 HKFLIGKGGGKIRKVRDSTGARIIFPA------AEDKDQDLI--TIIGKEDAVREAQKEL 790
Query: 69 TPLIFCFEYPL---MGSTPNANSPFV----QIIQEA---YN-VQVMFRNRPKLQPTLVMV 117
LI + + M P + FV Q+++E Y V V F R Q V +
Sbjct: 791 EALIQNLDNVVEDYMLVDPRHHRHFVIRRGQVLREIAEEYGGVMVSFP-RSGTQSDKVTL 849
Query: 118 KGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQT 177
KG + VE K+ ++IE + + V + I + H + GP ++ I
Sbjct: 850 KGAKDCVEAAKKRIQEIIEDL------EAQVTLECAIPQKFHRSVMGPKGSRIQQITRDY 903
Query: 178 GAQIVFPEAND-PIIPVLKKSSVTVSGN 204
QI FP+ + P+ V + S+ +G+
Sbjct: 904 NVQIKFPDREENPVHSV--EPSIQENGD 929
>UNIPROTKB|Q3KRF2 [details] [associations]
symbol:Hdlbp "High density lipoprotein binding protein,
isoform CRA_c" species:10116 "Rattus norvegicus" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:620962 GO:GO:0005737 GO:GO:0003723 EMBL:CH473997
GeneTree:ENSGT00690000102206 CTD:3069 HOVERGEN:HBG054107
OMA:YEKNTEA UniGene:Rn.8515 EMBL:BC105748 IPI:IPI00882548
RefSeq:NP_742036.2 SMR:Q3KRF2 Ensembl:ENSRNOT00000051155
GeneID:64474 KEGG:rno:64474 InParanoid:Q3KRF2 NextBio:613266
Genevestigator:Q3KRF2 Uniprot:Q3KRF2
Length = 1268
Score = 150 (57.9 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 56/213 (26%), Positives = 93/213 (43%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERARYRV---- 65
H +IIG+GG IKK+ EE+ + P N + S + I G E AR R+
Sbjct: 593 HKNIIGKGGANIKKIREESNTKIDLPAENSN-----SETIVITGKRANCEAARSRILSIQ 647
Query: 66 RELTPLIFC-FEYP--LMGSTPNANSPFVQ-IIQEAYNVQVMFRNRPKLQPTLVMVKGCE 121
++L + P L S ++ I++E V + F T+V ++G
Sbjct: 648 KDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSDTVV-IRGPS 706
Query: 122 KDVERVKEATTKLIEHMCGSLANQT-SVIMMMEISPQHHPIMEGPNAINLKTIMAQTGAQ 180
DVE+ K+ L E QT S + + P++H + G ++ + TGA+
Sbjct: 707 SDVEKAKKQLLHLAEE------KQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGAR 760
Query: 181 IVFPEANDPIIPVLKKSSVTVSGNIDSVYLARQ 213
I+FP A D + +T+ G D+V A++
Sbjct: 761 IIFPAAEDK-----DQDLITIIGKEDAVREAQK 788
Score = 119 (46.9 bits), Expect = 0.00037, P = 0.00037
Identities = 42/195 (21%), Positives = 88/195 (45%)
Query: 1 MKLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLER 60
+++++ + H H+IG+ G I ++ ++ V P ++EKSN + I G G+++
Sbjct: 438 VEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPP-----DSEKSNLIRIEGDPQGVQQ 492
Query: 61 ARYRVRELTPLI-------FCFEYPLMGSTPNANSPFVQIIQEAY-NVQVMFRNRPKLQP 112
A+ + EL + E + ++ I++ + V + F + P +
Sbjct: 493 AKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPD-PAQKS 551
Query: 113 TLVMVKGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKT 172
+V ++G + +VE+ TK ++ M L + S + + I Q H + G N+K
Sbjct: 552 EIVQLRGPKNEVEKC----TKYMQKMVADLV-ENSYSISVPIFKQFHKNIIGKGGANIKK 606
Query: 173 IMAQTGAQIVFPEAN 187
I ++ +I P N
Sbjct: 607 IREESNTKIDLPAEN 621
>UNIPROTKB|H0Y394 [details] [associations]
symbol:HDLBP "Vigilin" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 EMBL:AC104841 HGNC:HGNC:4857 ChiTaRS:HDLBP
ProteinModelPortal:H0Y394 Ensembl:ENST00000373292 Uniprot:H0Y394
Length = 973
Score = 149 (57.5 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 55/213 (25%), Positives = 93/213 (43%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERARYRV---- 65
H +IIG+GG IKK+ EE+ + P N + S + I G E AR R+
Sbjct: 402 HKNIIGKGGANIKKIREESNTKIDLPAENSN-----SETIIITGKRANCEAARSRILSIQ 456
Query: 66 RELTPLIFC-FEYP--LMGSTPNANSPFVQ-IIQEAYNVQVMFRNRPKLQPTLVMVKGCE 121
++L + P L S ++ I++E V + F T+V ++G
Sbjct: 457 KDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSDTVV-IRGPS 515
Query: 122 KDVERVKEATTKLIEHMCGSLANQT-SVIMMMEISPQHHPIMEGPNAINLKTIMAQTGAQ 180
DVE+ K+ L E QT S + + P++H + G ++ + TGA+
Sbjct: 516 SDVEKAKKQLLHLAEE------KQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGAR 569
Query: 181 IVFPEANDPIIPVLKKSSVTVSGNIDSVYLARQ 213
++FP A D + +T+ G D+V A++
Sbjct: 570 VIFPAAEDK-----DQDLITIIGKEDAVREAQK 597
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 42/195 (21%), Positives = 88/195 (45%)
Query: 1 MKLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLER 60
+++++ + H H+IG+ G I ++ ++ V P ++EKSN + I G G+++
Sbjct: 247 VEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPP-----DSEKSNLIRIEGDPQGVQQ 301
Query: 61 ARYRVRELTPLI-------FCFEYPLMGSTPNANSPFVQIIQEAY-NVQVMFRNRPKLQP 112
A+ + EL + E + ++ I++ + V + F + P +
Sbjct: 302 AKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPD-PAQKS 360
Query: 113 TLVMVKGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKT 172
+V ++G + +VE+ TK ++ M L + S + + I Q H + G N+K
Sbjct: 361 DIVQLRGPKNEVEKC----TKYMQKMVADLV-ENSYSISVPIFKQFHKNIIGKGGANIKK 415
Query: 173 IMAQTGAQIVFPEAN 187
I ++ +I P N
Sbjct: 416 IREESNTKIDLPAEN 430
Score = 117 (46.2 bits), Expect = 0.00047, P = 0.00047
Identities = 55/191 (28%), Positives = 84/191 (43%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERA-RYRVREL 68
H +IG+GG I+KV + TG V FP AE +Q I +++G E A R +EL
Sbjct: 548 HKFLIGKGGGKIRKVRDSTGARVIFPA------AEDKDQDLI--TIIGKEDAVREAQKEL 599
Query: 69 TPLIFCFEYPLMGST---PNANSPFV----QIIQEA---YN-VQVMFRNRPKLQPTLVMV 117
LI + + S P + FV Q+++E Y V V F R Q V +
Sbjct: 600 EALIQNLDNVVEDSMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFP-RSGTQSDKVTL 658
Query: 118 KGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQT 177
KG + VE K+ ++IE + + V + I + H + GP ++ I
Sbjct: 659 KGAKDCVEAAKKRIQEIIEDL------EAQVTLECAIPQKFHRSVMGPKGSRIQQITRDF 712
Query: 178 GAQIVFPEAND 188
QI FP+ +
Sbjct: 713 SVQIKFPDREE 723
>UNIPROTKB|Q00341 [details] [associations]
symbol:HDLBP "Vigilin" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006869 "lipid
transport" evidence=IEA] [GO:0008203 "cholesterol metabolic
process" evidence=IEA] [GO:0034364 "high-density lipoprotein
particle" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0008289 "lipid
binding" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006869 GO:GO:0008203 GO:GO:0003723 GO:GO:0008289
EMBL:AC104841 GO:GO:0034364 eggNOG:NOG313207 CTD:3069
HOGENOM:HOG000007687 HOVERGEN:HBG054107 EMBL:M64098 EMBL:AK300312
EMBL:BC001179 IPI:IPI00022228 IPI:IPI00894287 PIR:A44125
RefSeq:NP_001230829.1 RefSeq:NP_005327.1 RefSeq:NP_976221.1
UniGene:Hs.471851 UniGene:Hs.732361 PDB:1VIG PDB:1VIH PDB:2CTE
PDB:2CTF PDB:2CTJ PDB:2CTK PDB:2CTL PDB:2CTM PDBsum:1VIG
PDBsum:1VIH PDBsum:2CTE PDBsum:2CTF PDBsum:2CTJ PDBsum:2CTK
PDBsum:2CTL PDBsum:2CTM ProteinModelPortal:Q00341 SMR:Q00341
IntAct:Q00341 MINT:MINT-1189333 STRING:Q00341 PhosphoSite:Q00341
DMDM:218511884 PaxDb:Q00341 PeptideAtlas:Q00341 PRIDE:Q00341
DNASU:3069 Ensembl:ENST00000310931 Ensembl:ENST00000391975
Ensembl:ENST00000391976 Ensembl:ENST00000427183 GeneID:3069
KEGG:hsa:3069 UCSC:uc002waz.3 GeneCards:GC02M242188 HGNC:HGNC:4857
HPA:CAB026457 HPA:HPA004189 MIM:142695 neXtProt:NX_Q00341
PharmGKB:PA29235 InParanoid:Q00341 OMA:YEKNTEA OrthoDB:EOG4M65GT
PhylomeDB:Q00341 ChiTaRS:HDLBP EvolutionaryTrace:Q00341
GenomeRNAi:3069 NextBio:12141 ArrayExpress:Q00341 Bgee:Q00341
CleanEx:HS_HDLBP Genevestigator:Q00341 GermOnline:ENSG00000115677
Uniprot:Q00341
Length = 1268
Score = 149 (57.5 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 55/213 (25%), Positives = 93/213 (43%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERARYRV---- 65
H +IIG+GG IKK+ EE+ + P N + S + I G E AR R+
Sbjct: 593 HKNIIGKGGANIKKIREESNTKIDLPAENSN-----SETIIITGKRANCEAARSRILSIQ 647
Query: 66 RELTPLIFC-FEYP--LMGSTPNANSPFVQ-IIQEAYNVQVMFRNRPKLQPTLVMVKGCE 121
++L + P L S ++ I++E V + F T+V ++G
Sbjct: 648 KDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSDTVV-IRGPS 706
Query: 122 KDVERVKEATTKLIEHMCGSLANQT-SVIMMMEISPQHHPIMEGPNAINLKTIMAQTGAQ 180
DVE+ K+ L E QT S + + P++H + G ++ + TGA+
Sbjct: 707 SDVEKAKKQLLHLAEE------KQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGAR 760
Query: 181 IVFPEANDPIIPVLKKSSVTVSGNIDSVYLARQ 213
++FP A D + +T+ G D+V A++
Sbjct: 761 VIFPAAEDK-----DQDLITIIGKEDAVREAQK 788
Score = 119 (46.9 bits), Expect = 0.00037, P = 0.00037
Identities = 42/195 (21%), Positives = 88/195 (45%)
Query: 1 MKLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLER 60
+++++ + H H+IG+ G I ++ ++ V P ++EKSN + I G G+++
Sbjct: 438 VEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPP-----DSEKSNLIRIEGDPQGVQQ 492
Query: 61 ARYRVRELTPLI-------FCFEYPLMGSTPNANSPFVQIIQEAY-NVQVMFRNRPKLQP 112
A+ + EL + E + ++ I++ + V + F + P +
Sbjct: 493 AKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPD-PAQKS 551
Query: 113 TLVMVKGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKT 172
+V ++G + +VE+ TK ++ M L + S + + I Q H + G N+K
Sbjct: 552 DIVQLRGPKNEVEKC----TKYMQKMVADLV-ENSYSISVPIFKQFHKNIIGKGGANIKK 606
Query: 173 IMAQTGAQIVFPEAN 187
I ++ +I P N
Sbjct: 607 IREESNTKIDLPAEN 621
Score = 117 (46.2 bits), Expect = 0.00064, P = 0.00064
Identities = 55/191 (28%), Positives = 84/191 (43%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERA-RYRVREL 68
H +IG+GG I+KV + TG V FP AE +Q I +++G E A R +EL
Sbjct: 739 HKFLIGKGGGKIRKVRDSTGARVIFPA------AEDKDQDLI--TIIGKEDAVREAQKEL 790
Query: 69 TPLIFCFEYPLMGST---PNANSPFV----QIIQEA---YN-VQVMFRNRPKLQPTLVMV 117
LI + + S P + FV Q+++E Y V V F R Q V +
Sbjct: 791 EALIQNLDNVVEDSMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFP-RSGTQSDKVTL 849
Query: 118 KGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQT 177
KG + VE K+ ++IE + + V + I + H + GP ++ I
Sbjct: 850 KGAKDCVEAAKKRIQEIIEDL------EAQVTLECAIPQKFHRSVMGPKGSRIQQITRDF 903
Query: 178 GAQIVFPEAND 188
QI FP+ +
Sbjct: 904 SVQIKFPDREE 914
>UNIPROTKB|F1SI06 [details] [associations]
symbol:HDLBP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005737
GO:GO:0003723 GeneTree:ENSGT00690000102206 OMA:YEKNTEA
EMBL:FP102549 Ensembl:ENSSSCT00000017834 Uniprot:F1SI06
Length = 1095
Score = 146 (56.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 50/211 (23%), Positives = 94/211 (44%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRS-----VNAEKSNQVSIAGSLLGLERARYR 64
H +IIG+GG IKK+ EE+ + P N + + +++N + +L +++
Sbjct: 592 HKNIIGKGGANIKKIREESNTKIDLPAENSNSETIVITGKRANCEAARSRILSIQKDLAN 651
Query: 65 VRELTPLIFC-FEYPLMGSTPNANSPFVQIIQEAYNVQVMFRNRPKLQPTLVMVKGCEKD 123
+ E+ I L+G+ I++E V + F T+V ++G D
Sbjct: 652 IAEVEVAIPARLHNALIGTKGRL---IRSIMEECGGVHIHFPVEGSGSDTVV-IRGPSSD 707
Query: 124 VERVKEATTKLIEHMCGSLANQT-SVIMMMEISPQHHPIMEGPNAINLKTIMAQTGAQIV 182
VE+ ++ L E QT S + + P++H + G ++ + TGA+I+
Sbjct: 708 VEKARKQLLHLAEE------KQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARII 761
Query: 183 FPEANDPIIPVLKKSSVTVSGNIDSVYLARQ 213
FP A D + +T+ G D+V A++
Sbjct: 762 FPAAEDK-----DQDLITIIGREDAVREAQR 787
Score = 116 (45.9 bits), Expect = 0.00070, P = 0.00070
Identities = 55/191 (28%), Positives = 84/191 (43%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERA-RYRVREL 68
H +IG+GG I+KV + TG + FP AE +Q I +++G E A R REL
Sbjct: 738 HKFLIGKGGGKIRKVRDSTGARIIFPA------AEDKDQDLI--TIIGREDAVREAQREL 789
Query: 69 TPLIFCFEYPL---MGSTPNANSPFV----QIIQEA---YN-VQVMFRNRPKLQPTLVMV 117
LI + + M P + FV Q+++E Y V V F R Q V +
Sbjct: 790 EALIQNLDNVVEDFMLVDPRHHRHFVIRRGQVLREIAEEYGGVMVSFP-RSGTQSDRVTL 848
Query: 118 KGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQT 177
KG + VE K+ ++IE + + V + I + H + GP ++ I
Sbjct: 849 KGAKDCVEAAKKRIQEIIEDL------EAQVTIECAIPQKFHRSVMGPKGSRIQQITRDH 902
Query: 178 GAQIVFPEAND 188
QI FP+ +
Sbjct: 903 NVQIKFPDREE 913
>UNIPROTKB|F1NNX1 [details] [associations]
symbol:HDLBP "Vigilin" species:9031 "Gallus gallus"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 Pfam:PF13014 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00690000102206
IPI:IPI00583171 EMBL:AADN02024240 EMBL:AADN02024241
EMBL:AADN02024242 EMBL:AADN02024243 Ensembl:ENSGALT00000041042
ArrayExpress:F1NNX1 Uniprot:F1NNX1
Length = 1264
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 50/212 (23%), Positives = 94/212 (44%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPD---SNRSVNAE-KSNQVSIAGSLLGLERARYRV 65
H +IIG+GG IKK+ EE+ + P + R + ++ + V + +L +++ +
Sbjct: 592 HKNIIGKGGANIKKIREESNTKIDLPQRTATQRQLLSQARERTVKLRHRILAIQKELANI 651
Query: 66 RELTPLIFCFEYPLMGSTPNANSPFVQ-IIQEAYNVQVMFRNRPKLQPTLVMVKGCEKDV 124
E+ I L S A F++ I++E V + F PT +G D
Sbjct: 652 TEVEVSI---PSKLHNSLIGAKGRFIRSIMEECGGVHIHF-------PT----EGSGSDT 697
Query: 125 ERVKEATT--KLIEHMCGSLANQT-SVIMMMEISPQHHPIMEGPNAINLKTIMAQTGAQI 181
+++ T K C QT S + + P++H + G N++ + TGA+I
Sbjct: 698 VTIRQPRTWRKPRSSCCTWEEKQTKSYTVDLRAKPEYHKFLIGKGGGNIRKVRDNTGARI 757
Query: 182 VFPEANDPIIPVLKKSSVTVSGNIDSVYLARQ 213
+FP + D + +T+ G ++V A++
Sbjct: 758 IFPTSEDK-----DQELITIMGTEEAVKEAQK 784
Score = 129 (50.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 56/196 (28%), Positives = 87/196 (44%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERA-RYRVREL 68
H +IG+GG I+KV + TG + FP S E +Q I +++G E A + +EL
Sbjct: 735 HKFLIGKGGGNIRKVRDNTGARIIFPTS------EDKDQELI--TIMGTEEAVKEAQKEL 786
Query: 69 TPLIFCFEYPLMGST---PNANSPFV----QIIQEA---YN-VQVMFRNRPKLQPTLVMV 117
LI + + S P + FV Q+++E Y V V F R Q V +
Sbjct: 787 EALIKNLDNVVEDSMVVDPKHHRHFVIRRGQVLREIADEYGGVMVSFP-RSGTQSDKVTL 845
Query: 118 KGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQT 177
KG + VE K+ ++IE + + V + I + H + GP ++ I
Sbjct: 846 KGAKDCVEAAKKRIQEIIEDL------EAQVTIECTIPQKFHRSIMGPKGSRIQQITRDY 899
Query: 178 GAQIVFPEANDPIIPV 193
G QI FP+ + PV
Sbjct: 900 GVQIKFPDREENPAPV 915
Score = 119 (46.9 bits), Expect = 0.00037, P = 0.00037
Identities = 44/192 (22%), Positives = 85/192 (44%)
Query: 2 KLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERA 61
+++V + H H+IG+ G I ++ + V P N EKSN + I G G+++A
Sbjct: 438 EINVDHKFHRHLIGKNGANINRIKDLYKVSVRIPPDN-----EKSNLIRIEGDPQGVQQA 492
Query: 62 RYRVRELTPLI-------FCFEYPLMGSTPNANSPFVQIIQEAY-NVQVMFRNRPKLQPT 113
+ + EL + E + ++ I+E + V + F + P +
Sbjct: 493 KKELLELASRMENERTKDLIIEQKFHRTIIGQKGERIREIREKFPEVIINFPD-PAHKSD 551
Query: 114 LVMVKGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTI 173
+V ++G + +VE+ TK ++ M L + S + + I Q H + G N+K I
Sbjct: 552 IVQLRGPKNEVEKC----TKYMQKMVADLV-ENSFSISVPIFKQFHKNIIGKGGANIKKI 606
Query: 174 MAQTGAQIVFPE 185
++ +I P+
Sbjct: 607 REESNTKIDLPQ 618
>SGD|S000003616 [details] [associations]
symbol:SCP160 "Essential RNA-binding G protein effector of
mating response pathway" species:4932 "Saccharomyces cerevisiae"
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;IDA] [GO:0000750 "pheromone-dependent signal
transduction involved in conjugation with cellular fusion"
evidence=IGI] [GO:0006348 "chromatin silencing at telomere"
evidence=IGI;IMP] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0045141 "meiotic telomere
clustering" evidence=IMP] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA;IDA] [GO:0008298 "intracellular mRNA
localization" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005844 "polysome"
evidence=IDA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0042175
"nuclear outer membrane-endoplasmic reticulum membrane network"
evidence=IDA] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IPI] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 SGD:S000003616 GO:GO:0007059
EMBL:BK006943 GO:GO:0005789 GO:GO:0031965 GO:GO:0003723
GO:GO:0030466 GO:GO:0006348 GO:GO:0000750 GO:GO:0005844 EMBL:X83502
EMBL:X88851 GO:GO:0008298 GO:GO:0045141 EMBL:Z49354 EMBL:X65645
EMBL:Z49355 EMBL:X04679 PIR:S56030 RefSeq:NP_012455.1
ProteinModelPortal:P06105 SMR:P06105 DIP:DIP-2742N IntAct:P06105
MINT:MINT-629783 STRING:P06105 PaxDb:P06105 PeptideAtlas:P06105
PRIDE:P06105 EnsemblFungi:YJL080C GeneID:853365 KEGG:sce:YJL080C
CYGD:YJL080c eggNOG:NOG313207 GeneTree:ENSGT00690000102206
HOGENOM:HOG000246781 OMA:DLDYELF OrthoDB:EOG4ZKNVH NextBio:973795
Genevestigator:P06105 GermOnline:YJL080C Uniprot:P06105
Length = 1222
Score = 125 (49.1 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 47/217 (21%), Positives = 98/217 (45%)
Query: 1 MKLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFP-DSNRSVNAEKSNQVSIAGSLLGLE 59
M +++ + +IG G ++++ E+ C + P + N + + +K+ +V++ G L
Sbjct: 637 MTVNIPANSVARLIGNKGSNLQQIREKFACQIDIPNEENNNASKDKTVEVTLTGLEYNLT 696
Query: 60 RAR-YRVRELTPL--IFCFEY--PLM--GSTPNANSPFVQIIQEAYNVQVMFRNRPKLQP 112
A+ Y E I E P+ GS + + +QE YNV F N P+
Sbjct: 697 HAKKYLAAEAKKWADIITKELIVPVKFHGSLIGPHGTYRNRLQEKYNV---FINFPR-DN 752
Query: 113 TLVMVKGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKT 172
+V ++G + V + E L++ + N M++ + +H P + G N N+
Sbjct: 753 EIVTIRGPSRGVNKAHEELKALLDF---EMENGHK--MVINVPAEHVPRIIGKNGDNIND 807
Query: 173 IMAQTGAQIVF-PEANDPIIPVLKKSSVTVSGNIDSV 208
I A+ G ++ F ++ DP + + ++G+ ++
Sbjct: 808 IRAEYGVEMDFLQKSTDPKAQETGEVELEITGSRQNI 844
>RGD|1563104 [details] [associations]
symbol:RGD1563104 "similar to Vigilin (High density
lipoprotein-binding protein)" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
RGD:1563104 GO:GO:0003723 EMBL:CH473969
GeneTree:ENSGT00690000102206 IPI:IPI00369784 RefSeq:NP_001100437.1
UniGene:Rn.218608 Ensembl:ENSRNOT00000043728 GeneID:302773
KEGG:rno:302773 UCSC:RGD:1563104 CTD:302773 OrthoDB:EOG47H5RT
NextBio:650111 Uniprot:D4A4T3
Length = 1250
Score = 125 (49.1 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 53/209 (25%), Positives = 91/209 (43%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEK------SNQVSIAGS-LLGLER-- 60
H +IG+G IKK+ E T + FP N N+E+ IA + +L +++
Sbjct: 580 HKRLIGKGASNIKKISETTNTKISFPPEN--CNSEEFIITGYPENCEIARNWILSIQQEI 637
Query: 61 ARYRVRELTPLIFCFEYPLMGSTPNANSPFVQIIQEAYNVQVMF-RNRPKLQPTLVMVKG 119
A E+T ++Y NS II+E + + F +N+ L ++M G
Sbjct: 638 ADTAEEEITIPTNLYKYLNNPKECLLNS----IIEECGKIHLHFPKNKSSLNKVIIM--G 691
Query: 120 CEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQTGA 179
+ VE+ K KL E N + I + Q+H + N N+ I +TG
Sbjct: 692 SVESVEKAKAKLLKLAEEE--QAKNYSEKI---RVKSQYHQFLVNKNGGNISQICDETGT 746
Query: 180 QIVFPEANDPIIPVLKKSSVTVSGNIDSV 208
++FP + + S+T++G+ +SV
Sbjct: 747 CVLFPNHTNK-----DQESLTITGSEESV 770
>UNIPROTKB|P81021 [details] [associations]
symbol:HDLBP "Vigilin" species:9031 "Gallus gallus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
Pfam:PF13014 PROSITE:PS50084 SMART:SM00322 GO:GO:0005737
GO:GO:0003723 eggNOG:NOG313207 EMBL:X65292 IPI:IPI00583171
PIR:S23464 RefSeq:NP_990427.1 UniGene:Gga.6253
ProteinModelPortal:P81021 SMR:P81021 STRING:P81021 PRIDE:P81021
GeneID:395984 KEGG:gga:395984 CTD:3069 HOGENOM:HOG000007687
HOVERGEN:HBG054107 NextBio:20816048 Uniprot:P81021
Length = 1270
Score = 124 (48.7 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 54/196 (27%), Positives = 85/196 (43%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERA-RYRVREL 68
H +IG+GG I+KV + TG + FP S E +Q I +++G E A + +EL
Sbjct: 739 HKFLIGKGGGNIRKVRDNTGARIIFPTS------EDKDQELI--TIMGTEEAVKEAQKEL 790
Query: 69 TPLIFCFEYPLMGST---PNANSPFV----QIIQEA---YN-VQVMFRNRPKLQPTLVMV 117
LI + + S P + FV Q+++E Y V V Q V +
Sbjct: 791 EALIKNLDNVVEDSMVVDPKHHRHFVIRRGQVLREIADEYGGVMVRLPTVSGTQSDKVTL 850
Query: 118 KGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTIMAQT 177
KG + VE K+ ++IE + + V + I + H + GP ++ I
Sbjct: 851 KGAKDCVEAAKKRIQEIIEDL------EAQVTIECTIPQKFHRSIMGPKGSRIQQITRDY 904
Query: 178 GAQIVFPEANDPIIPV 193
G QI FP+ + PV
Sbjct: 905 GVQIKFPDREENPAPV 920
Score = 119 (46.9 bits), Expect = 0.00037, P = 0.00037
Identities = 50/215 (23%), Positives = 93/215 (43%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERARYRV---- 65
H +IIG+GG IKK+ EE+ + P ++ + +Q G ++ R+R+
Sbjct: 592 HKNIIGKGGANIKKIREESNTKIDLPGREQATQRQLLSQ----GREQTVKLLRHRILAIQ 647
Query: 66 REL---TPLIFCFEYPLMGSTPNANSPFVQ-IIQEAYNVQVMFRNRPKLQPTLVMVKGCE 121
+EL T + L S A F++ I++E V + F T+ +
Sbjct: 648 KELANITEVEVSIPSKLHNSLIGAKGRFIRSIMEECGGVHIHFPTEGSGSATVTI----- 702
Query: 122 KDVERVKEATTKLIEHMCGSLAN--QT-SVIMMMEISPQHHPIMEGPNAINLKTIMAQTG 178
R + T + C + A QT S + + P++H + G N++ + TG
Sbjct: 703 ----RAQPRTWRKPRSSCCTWAEEKQTKSYTVDLRAKPEYHKFLIGKGGGNIRKVRDNTG 758
Query: 179 AQIVFPEANDPIIPVLKKSSVTVSGNIDSVYLARQ 213
A+I+FP + D + +T+ G ++V A++
Sbjct: 759 ARIIFPTSEDK-----DQELITIMGTEEAVKEAQK 788
Score = 117 (46.2 bits), Expect = 0.00064, P = 0.00064
Identities = 44/191 (23%), Positives = 84/191 (43%)
Query: 2 KLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERA 61
+++V + H H+IG+ G I ++ + V P N EKSN + I G G+++A
Sbjct: 438 EINVDHKFHRHLIGKNGANINRIKDLYKVSVRIPPDN-----EKSNLIRIEGDPQGVQQA 492
Query: 62 RYRVRELTPLI-------FCFEYPLMGSTPNANSPFVQIIQEAY-NVQVMFRNRPKLQPT 113
+ + EL + E + ++ I+E + V + F + P +
Sbjct: 493 KKELLELASRMENERTKDLIIEQKFHRTIIGQKGERIREIREKFPEVIINFPD-PAHKSD 551
Query: 114 LVMVKGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTI 173
+V ++G + +VE+ TK ++ M L + S + + I Q H + G N+K I
Sbjct: 552 IVQLRGPKNEVEKC----TKYMQKMVADLV-ENSFSISVPIFKQFHKNIIGKGGANIKKI 606
Query: 174 MAQTGAQIVFP 184
++ +I P
Sbjct: 607 REESNTKIDLP 617
>WB|WBGene00007463 [details] [associations]
symbol:C08H9.2 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040017 "positive regulation of locomotion" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0009792 GO:GO:0040007
GO:GO:0018991 GO:GO:0040010 GO:GO:0002119 GO:GO:0010171
GO:GO:0040011 GO:GO:0040017 GO:GO:0003723 GO:GO:0040035 EMBL:Z54342
GeneTree:ENSGT00690000102206 HOGENOM:HOG000007687 OMA:YEKNTEA
GeneID:174543 KEGG:cel:CELE_C08H9.2 CTD:174543 NextBio:884484
PIR:B88279 PIR:T19117 RefSeq:NP_496136.1 HSSP:P51513
ProteinModelPortal:Q17832 SMR:Q17832 STRING:Q17832 PRIDE:Q17832
EnsemblMetazoa:C08H9.2a.1 EnsemblMetazoa:C08H9.2a.2 UCSC:C08H9.2
WormBase:C08H9.2a InParanoid:Q17832 ArrayExpress:Q17832
Uniprot:Q17832
Length = 1220
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 51/207 (24%), Positives = 96/207 (46%)
Query: 2 KLDVSYTDHSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERA 61
K+ V T H H+IGRGG I K+ ++ G + P N N S+++ + G G+++A
Sbjct: 422 KVKVHPTLHRHVIGRGGSLISKIKDQHGVQITIP--NEETN---SDEIVVEGKKEGVKKA 476
Query: 62 RYRVRELTPLI-------FCFEYPLMGSTPNANSPFVQIIQEAY-NVQVMFRNRPKLQPT 113
+R + I L + VQ+I++++ NV V+F + K +
Sbjct: 477 VTEIRAIVTKIENEKSRDIIIPQRLHKLIIGSKGSGVQVIRDSHPNVSVVFPDA-KSKSD 535
Query: 114 LVMVKGCEKDVERVKEATTKLIEHMCGSLANQTSVIMMMEISPQHHPIMEGPNAINLKTI 173
+V ++G + +V+ V + T L + + QT V + E +H + G +++ +
Sbjct: 536 VVNIRGDKTEVDAVYKKLTALSKEYAENNYQQT-VAIFKEFL-KH---IVGKGGASIRKL 590
Query: 174 MAQTGAQIVFPEA--NDPIIPVLKKSS 198
+T +I PE+ +D I V K +
Sbjct: 591 RDETETRIDLPESGSDDGKITVTGKQA 617
>UNIPROTKB|H7BZC3 [details] [associations]
symbol:HDLBP "Vigilin" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 EMBL:AC104841 HGNC:HGNC:4857 ChiTaRS:HDLBP
ProteinModelPortal:H7BZC3 Ensembl:ENST00000452931 Bgee:H7BZC3
Uniprot:H7BZC3
Length = 267
Score = 112 (44.5 bits), Expect = 0.00025, P = 0.00025
Identities = 45/178 (25%), Positives = 74/178 (41%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERARYRV---- 65
H +IIG+GG IKK+ EE+ + P N + S + I G E AR R+
Sbjct: 102 HKNIIGKGGANIKKIREESNTKIDLPAENSN-----SETIIITGKRANCEAARSRILSIQ 156
Query: 66 RELTPLIFC-FEYP--LMGSTPNANSPFVQ-IIQEAYNVQVMFRNRPKLQPTLVMVKGCE 121
++L + P L S ++ I++E V + F T+V ++G
Sbjct: 157 KDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSDTVV-IRGPS 215
Query: 122 KDVERVKEATTKLIEHMCGSLANQT-SVIMMMEISPQHHPIMEGPNAINLKTIMAQTG 178
DVE+ K+ L E QT S + + P++H + G ++ + TG
Sbjct: 216 SDVEKAKKQLLHLAEE------KQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTG 267
>UNIPROTKB|F1MT25 [details] [associations]
symbol:HDLBP "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005737
GO:GO:0003723 GeneTree:ENSGT00690000102206 OMA:YEKNTEA
EMBL:DAAA02009526 EMBL:DAAA02009521 EMBL:DAAA02009522
EMBL:DAAA02009523 EMBL:DAAA02009524 EMBL:DAAA02009525
IPI:IPI00688673 Ensembl:ENSBTAT00000005656 Uniprot:F1MT25
Length = 1257
Score = 86 (35.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 10 HSHIIGRGGLTIKKVMEETGCHVHFPDSNRSVNAEKSNQVSIAGSLLGLERARYRV 65
H +IIG+GG IKK+ EE+ + P N + S + I G E AR R+
Sbjct: 593 HKNIIGKGGANIKKIREESNTKIDLPAENSN-----SETIVITGKRANCEAARSRI 643
Score = 81 (33.6 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 31/168 (18%), Positives = 69/168 (41%)
Query: 49 VSIAGSLLGLERARYRVRELTPLIFCFEYP--LMGSTPNANSPFVQIIQEAYNVQVMFRN 106
+ I+G E A+ + L P+ E P L ++ + + + V +
Sbjct: 940 IVISGRKEKCEAAKEALEALVPVTIEVEVPFDLHRYIIGQKGSGIRKMMDEFEVNIHVP- 998
Query: 107 RPKLQPTLVMVKGCEKDVERVKEATTKLIEHMCGSLANQT--SVIMMMEISPQHHPIMEG 164
P+LQ ++ + G ++R K + ++ + ++ S + + + P++HP + G
Sbjct: 999 APELQSDIIAITGLAAHLDRAKAGLLERVKELQAEQEDRALRSFKLSVTVDPKYHPKIIG 1058
Query: 165 PNAINLKTIMAQTGAQIVFPEANDPIIPVLKKSSVTVSGNIDSVYLAR 212
+ I + I FP+ +D P + +T++G + AR
Sbjct: 1059 RKGAVITQIRLEHDVNIQFPDKDDGSQP---QDQITITGYEKNTEAAR 1103
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 238 224 0.00099 112 3 11 22 0.39 33
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 574 (61 KB)
Total size of DFA: 155 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.02u 0.12s 19.14t Elapsed: 00:00:02
Total cpu time: 19.03u 0.12s 19.15t Elapsed: 00:00:02
Start: Thu Aug 15 15:05:27 2013 End: Thu Aug 15 15:05:29 2013