Your job contains 1 sequence.
>psy1128
MRYVFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWIS
GLIVGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVA
PLAVTVEDLVFVDPNRGNLVDQVSTKEVVTYNPTGSVHLCVVDCGLKYNQLRCLIQRGAK
LSVIPWNHPIKVPQGWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDI
FINAVRDSKTRTPVPPIRKTIYDTLVPKDEALIAKSFQTPKKTSVRKMREDNGIRPYNKQ
IDTLAAEHPAQTNYLYLTYNATAHDLAVKETVSIIKG
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1128
(337 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
WB|WBGene00004259 - symbol:pyr-1 species:6239 "Caenorhabd... 475 6.5e-75 3
ZFIN|ZDB-GENE-081105-17 - symbol:cps1 "carbamoyl-phosphat... 466 8.4e-74 3
UNIPROTKB|P31327 - symbol:CPS1 "Carbamoyl-phosphate synth... 416 1.1e-67 3
UNIPROTKB|J3KQL0 - symbol:CPS1 "Carbamoyl-phosphate synth... 416 1.1e-67 3
UNIPROTKB|F1SSS0 - symbol:CPS1 "Uncharacterized protein" ... 417 1.5e-67 3
UNIPROTKB|F1PJF3 - symbol:CPS1 "Uncharacterized protein" ... 416 3.5e-67 3
UNIPROTKB|F1MVC0 - symbol:CAD "Uncharacterized protein" s... 579 4.1e-67 2
UNIPROTKB|F1ML89 - symbol:CPS1 "Uncharacterized protein" ... 416 4.5e-67 3
MGI|MGI:891996 - symbol:Cps1 "carbamoyl-phosphate synthet... 408 9.6e-67 3
UNIPROTKB|F8VPD4 - symbol:CAD "CAD protein" species:9606 ... 571 2.1e-66 2
UNIPROTKB|P27708 - symbol:CAD "CAD protein" species:9606 ... 571 2.3e-66 2
RGD|2395 - symbol:Cps1 "carbamoyl-phosphate synthetase 1"... 398 1.1e-65 3
UNIPROTKB|P07756 - symbol:Cps1 "Carbamoyl-phosphate synth... 398 1.1e-65 3
UNIPROTKB|P08955 - symbol:CAD "CAD protein" species:10036... 569 2.6e-65 2
UNIPROTKB|E2RAV2 - symbol:CAD "Uncharacterized protein" s... 562 2.6e-65 2
UNIPROTKB|F1N9N8 - symbol:CPS1 "Uncharacterized protein" ... 416 3.7e-65 3
UNIPROTKB|F1N9P0 - symbol:CPS1 "Uncharacterized protein" ... 416 4.5e-65 3
RGD|1588606 - symbol:Cad "carbamoyl-phosphate synthetase ... 565 8.7e-65 2
SGD|S000003666 - symbol:URA2 "Bifunctional carbamoylphosp... 349 4.5e-64 3
UNIPROTKB|J9P266 - symbol:CAD "Uncharacterized protein" s... 536 1.4e-62 2
ZFIN|ZDB-GENE-021030-4 - symbol:cad "carbamoyl-phosphate ... 540 1.3e-61 2
CGD|CAL0000759 - symbol:URA2 species:5476 "Candida albica... 332 2.7e-60 3
ASPGD|ASPL0000042502 - symbol:cpa species:162425 "Emerice... 444 4.8e-60 2
POMBASE|SPAC22G7.06c - symbol:ura1 "carbamoyl-phosphate s... 336 5.9e-60 3
ASPGD|ASPL0000059511 - symbol:pyrABCN species:162425 "Eme... 328 6.3e-60 3
UNIPROTKB|O93937 - symbol:pyrABCN "Protein pyrABCN" speci... 328 6.3e-60 3
UNIPROTKB|G4MVB1 - symbol:MGG_01743 "Carbamoyl-phosphate ... 452 7.8e-56 2
FB|FBgn0003189 - symbol:r "rudimentary" species:7227 "Dro... 481 8.9e-56 2
CGD|CAL0003663 - symbol:CPA1 species:5476 "Candida albica... 413 1.6e-55 2
UNIPROTKB|Q5AML6 - symbol:CPA1 "Carbamoyl-phosphate synth... 413 1.6e-55 2
POMBASE|SPBC56F2.09c - symbol:arg5 "arginine specific car... 413 5.4e-53 2
DICTYBASE|DDB_G0276335 - symbol:pyr1-3 "glutamine-depende... 409 1.4e-52 2
SGD|S000005829 - symbol:CPA1 "Small subunit of carbamoyl ... 402 1.6e-51 2
GENEDB_PFALCIPARUM|PF13_0044 - symbol:cpsSII "carbamoyl p... 301 2.8e-46 4
UNIPROTKB|Q8IEN3 - symbol:cpsSII "Carbamoyl phosphate syn... 301 2.8e-46 4
TIGR_CMR|BA_4026 - symbol:BA_4026 "carbamoyl-phosphate sy... 310 6.5e-39 2
TIGR_CMR|CHY_1500 - symbol:CHY_1500 "carbamoyl-phosphate ... 309 1.9e-37 2
TIGR_CMR|DET_1201 - symbol:DET_1201 "carbamoyl-phosphate ... 268 2.4e-35 2
TIGR_CMR|CBU_1282 - symbol:CBU_1282 "carbamoyl-phosphate ... 264 2.8e-32 2
TIGR_CMR|GSU_1273 - symbol:GSU_1273 "carbamoyl-phosphate ... 249 8.1e-32 2
UNIPROTKB|P0A6F1 - symbol:carA species:83333 "Escherichia... 242 2.3e-31 3
UNIPROTKB|P71811 - symbol:carA "Carbamoyl-phosphate synth... 251 5.3e-31 2
UNIPROTKB|I3LLT2 - symbol:CAD "Uncharacterized protein" s... 243 2.9e-30 2
UNIPROTKB|Q9KPH8 - symbol:carA "Carbamoyl-phosphate synth... 254 1.5e-29 2
TIGR_CMR|VC_2390 - symbol:VC_2390 "carbamoyl-phosphate sy... 254 1.5e-29 2
TIGR_CMR|CPS_3459 - symbol:CPS_3459 "carbamoyl-phosphate ... 255 2.8e-29 2
TIGR_CMR|SO_1141 - symbol:SO_1141 "carbamoyl-phosphate sy... 231 2.6e-23 2
TAIR|locus:2089149 - symbol:CARA "AT3G27740" species:3702... 202 2.0e-20 2
TIGR_CMR|SPO_1377 - symbol:SPO_1377 "carbamoyl-phosphate ... 197 3.7e-20 2
TIGR_CMR|ECH_0503 - symbol:ECH_0503 "carbamoyl-phosphate ... 190 7.0e-20 2
TIGR_CMR|APH_0381 - symbol:APH_0381 "carbamoyl-phosphate ... 200 3.6e-19 2
TIGR_CMR|CJE_1667 - symbol:CJE_1667 "carbamoyl-phosphate ... 167 2.5e-15 2
UNIPROTKB|E7EWJ3 - symbol:CPS1 "Carbamoyl-phosphate synth... 192 7.6e-15 1
TIGR_CMR|NSE_0502 - symbol:NSE_0502 "carbamoyl-phosphate ... 151 1.6e-13 2
UNIPROTKB|C9JTA4 - symbol:CPS1 "Carbamoyl-phosphate synth... 134 2.2e-08 1
ASPGD|ASPL0000006265 - symbol:AN5999 species:162425 "Emer... 157 6.1e-08 1
SGD|S000003870 - symbol:CPA2 "Large subunit of carbamoyl ... 149 4.4e-07 1
CGD|CAL0003247 - symbol:CPA2 species:5476 "Candida albica... 146 9.9e-07 1
POMBASE|SPBC215.08c - symbol:arg4 "arginine specific carb... 134 2.1e-05 1
UNIPROTKB|I3LIW0 - symbol:I3LIW0 "Uncharacterized protein... 121 4.8e-05 1
>WB|WBGene00004259 [details] [associations]
symbol:pyr-1 species:6239 "Caenorhabditis elegans"
[GO:0004070 "aspartate carbamoyltransferase activity" evidence=IEA]
[GO:0006207 "'de novo' pyrimidine nucleobase biosynthetic process"
evidence=IEA] [GO:0016812 "hydrolase activity, acting on
carbon-nitrogen (but not peptide) bonds, in cyclic amides"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0006807 "nitrogen compound metabolic process"
evidence=IEA] [GO:0006520 "cellular amino acid metabolic process"
evidence=IEA] [GO:0016597 "amino acid binding" evidence=IEA]
[GO:0016743 "carboxyl- or carbamoyltransferase activity"
evidence=IEA] [GO:0006543 "glutamine catabolic process"
evidence=IEA] [GO:0070409 "carbamoyl phosphate biosynthetic
process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008716 "D-alanine-D-alanine ligase activity"
evidence=IEA] [GO:0009252 "peptidoglycan biosynthetic process"
evidence=IEA] [GO:0006541 "glutamine metabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0060465 "pharynx development" evidence=IMP]
[GO:0019856 "pyrimidine nucleobase biosynthetic process"
evidence=IMP] HAMAP:MF_00001 HAMAP:MF_01209 InterPro:IPR002082
InterPro:IPR002195 InterPro:IPR005479 InterPro:IPR005481
InterPro:IPR005483 InterPro:IPR006130 InterPro:IPR006131
InterPro:IPR006132 InterPro:IPR006274 InterPro:IPR006275
InterPro:IPR006680 InterPro:IPR011059 InterPro:IPR011761
InterPro:IPR013815 InterPro:IPR013816 Pfam:PF00185 Pfam:PF00289
Pfam:PF01979 Pfam:PF02729 Pfam:PF02786 PRINTS:PR00098
PRINTS:PR00100 PRINTS:PR00101 PROSITE:PS00097 PROSITE:PS00482
PROSITE:PS00483 PROSITE:PS00866 PROSITE:PS00867 PROSITE:PS50975
InterPro:IPR016185 Pfam:PF00117 Pfam:PF02787 GO:GO:0005524
GO:GO:0009792 GO:GO:0040010 GO:GO:0002119 GO:GO:0046872
GO:GO:0018996 GO:GO:0040011 GO:GO:0016597 Gene3D:3.30.1490.20
Gene3D:3.30.470.20 Gene3D:3.40.50.20 SUPFAM:SSF52440
SUPFAM:SSF51338 GO:GO:0070409 GO:GO:0006543 Gene3D:3.50.30.20
InterPro:IPR002474 InterPro:IPR017926 Pfam:PF00988 SMART:SM01097
SUPFAM:SSF52021 TIGRFAMs:TIGR01368 PROSITE:PS51273 GO:GO:0006207
eggNOG:COG0458 Gene3D:1.10.1030.10 Gene3D:3.40.50.1380
InterPro:IPR005480 InterPro:IPR011607 Pfam:PF02142 SMART:SM01096
SMART:SM00851 SUPFAM:SSF48108 SUPFAM:SSF52335 TIGRFAMs:TIGR01369
GeneTree:ENSGT00390000015604 GO:GO:0016812 SUPFAM:SSF53671
KO:K11540 OMA:QRPVHIC GO:GO:0004070 TIGRFAMs:TIGR00670
HOGENOM:HOG000234584 EMBL:Z54284 RefSeq:NP_495838.2
ProteinModelPortal:Q18990 STRING:Q18990 PaxDb:Q18990
EnsemblMetazoa:D2085.1 GeneID:174385 KEGG:cel:CELE_D2085.1
UCSC:D2085.1 CTD:174385 WormBase:D2085.1 InParanoid:Q18990
NextBio:883806 Uniprot:Q18990
Length = 2198
Score = 475 (172.3 bits), Expect = 6.5e-75, Sum P(3) = 6.5e-75
Identities = 99/209 (47%), Positives = 129/209 (61%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQD-KDEHGILKYFESHRIWISGL 62
VFQTGMVGY E++TDPSY +Q+L LTYPLIGNYGVP + D+ + FES RIW + L
Sbjct: 29 VFQTGMVGYVESLTDPSYAKQLLTLTYPLIGNYGVPSAEILDQFKLPAEFESDRIWPAAL 88
Query: 63 IVGDMC--DTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVA 120
IV +C SHW + +L EWLR ++P L+ +D R+L K IRE G + K+V S
Sbjct: 89 IVEKICVDGEHSHWQAVQSLSEWLRKADVPCLSGIDVRQLVKKIRETGTMKAKLVIESD- 147
Query: 121 PLAVTVEDLVFVDPNRGNLVDQVSTKEVVTYNPTGSVHLCVVDCGLKYNQLRCLIQRGAK 180
++ +VD N NLVD VS KE V Y +G + VDCGLK NQ+RCL +RG +
Sbjct: 148 ----NAQNFDYVDVNAENLVDFVSRKEPVVYG-SGDQTILAVDCGLKNNQIRCLAKRGFR 202
Query: 181 LSVIPWNHPIKVPQGWQPLFTNANDGTNE 209
+ V+PWNHPI + LF + G E
Sbjct: 203 VKVVPWNHPIDTESDYDGLFLSNGPGDPE 231
Score = 234 (87.4 bits), Expect = 6.5e-75, Sum P(3) = 6.5e-75
Identities = 42/64 (65%), Positives = 49/64 (76%)
Query: 189 PIKVPQGWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRDS 248
P +P W+ LFTN ND TNEGIVH S PFFSVQFHPEHTAGP D E LFD+F ++VR +
Sbjct: 304 PDSLPADWKALFTNENDKTNEGIVHSSKPFFSVQFHPEHTAGPTDCEFLFDVFADSVRQA 363
Query: 249 KTRT 252
K+ T
Sbjct: 364 KSGT 367
Score = 125 (49.1 bits), Expect = 6.5e-75, Sum P(3) = 6.5e-75
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 273 IAKSFQTPKKTSVRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDLA--VKE 330
IAK + + T VR+ R GI P KQIDT+A E PAQTNYLY T+N +D++ +K
Sbjct: 877 IAKKIGSNEYT-VREARFVKGITPCVKQIDTVAGEWPAQTNYLYTTFNGIENDVSFNMKN 935
Query: 331 TVSII 335
V ++
Sbjct: 936 AVMVL 940
>ZFIN|ZDB-GENE-081105-17 [details] [associations]
symbol:cps1 "carbamoyl-phosphate synthase 1,
mitochondrial" species:7955 "Danio rerio" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006543 "glutamine catabolic process" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070409 "carbamoyl phosphate biosynthetic
process" evidence=IEA] [GO:0006807 "nitrogen compound metabolic
process" evidence=IEA] HAMAP:MF_01209 InterPro:IPR005479
InterPro:IPR005481 InterPro:IPR005483 InterPro:IPR006274
InterPro:IPR006275 InterPro:IPR011761 InterPro:IPR013815
InterPro:IPR013816 Pfam:PF00289 Pfam:PF02786 PRINTS:PR00098
PROSITE:PS00866 PROSITE:PS00867 PROSITE:PS50975 InterPro:IPR016185
Pfam:PF00117 Pfam:PF02787 ZFIN:ZDB-GENE-081105-17 GO:GO:0005524
GO:GO:0003824 GO:GO:0046872 Gene3D:3.30.1490.20 Gene3D:3.30.470.20
Gene3D:3.40.50.20 SUPFAM:SSF52440 GO:GO:0070409 GO:GO:0006543
Gene3D:3.50.30.20 InterPro:IPR002474 InterPro:IPR017926
Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021 TIGRFAMs:TIGR01368
PROSITE:PS51273 Gene3D:1.10.1030.10 Gene3D:3.40.50.1380
InterPro:IPR005480 InterPro:IPR011607 Pfam:PF02142 SMART:SM01096
SMART:SM00851 SUPFAM:SSF48108 SUPFAM:SSF52335 TIGRFAMs:TIGR01369
GeneTree:ENSGT00390000015604 EMBL:CR812481 IPI:IPI00497467
Ensembl:ENSDART00000004742 Uniprot:F6PBT6
Length = 1482
Score = 466 (169.1 bits), Expect = 8.4e-74, Sum P(3) = 8.4e-74
Identities = 92/188 (48%), Positives = 125/188 (66%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVP-PQDKDEHGILKYFESHRIWISGL 62
VF TG+VGYPEA+TDPSY QIL LTYP++GNYGVP Q+ DE G+ K ES RI +SGL
Sbjct: 61 VFNTGLVGYPEALTDPSYRGQILTLTYPIVGNYGVPNTQELDELGLKKNVESDRIQVSGL 120
Query: 63 IVGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPL 122
+V D SHWNS +L +WL+ +PAL +DTR LTK IR+ G V GKI P+
Sbjct: 121 LVQDYSAEYSHWNSVKSLAQWLQEEKVPALFGIDTRMLTKIIRDKGTVLGKIEFDG-QPV 179
Query: 123 AVTVEDLVFVDPNRGNLVDQVSTKEVVTYNPTGSVHLCVVDCGLKYNQLRCLIQRGAKLS 182
+T DPN+ NLV +VSTK++ + V + VDCG+K+N +R L++RGA++
Sbjct: 180 EIT-------DPNQRNLVSEVSTKDIQVFGKGNPVKVVAVDCGIKHNIIRLLVKRGAEVH 232
Query: 183 VIPWNHPI 190
++PW+ +
Sbjct: 233 LVPWDQDL 240
Score = 208 (78.3 bits), Expect = 8.4e-74, Sum P(3) = 8.4e-74
Identities = 47/112 (41%), Positives = 59/112 (52%)
Query: 192 VPQGWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRDSKT- 250
+P GW PLF NANDGTNEGI+H + P F+ QFHPE GP D E LFD FI+ +R +
Sbjct: 335 LPPGWSPLFINANDGTNEGIMHNTKPVFTAQFHPEAKGGPTDTEFLFDAFISLIRKGREG 394
Query: 251 -------RTPVPPIRKTIYDTLVPKDEALI---AKSFQTPKKTSVRKMREDN 292
+ P P R + LV L A F +V+ MRE+N
Sbjct: 395 SIASVMPKKPAVPPRIQVSKVLVLGSGGLSIGQAGEFDYSGSQAVKAMREEN 446
Score = 142 (55.0 bits), Expect = 8.4e-74, Sum P(3) = 8.4e-74
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 286 RKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDLAVKETVSIIKG 337
R +R + IRP+ KQIDTLAAE+PA TNYLY TY+ HDL K+ +++ G
Sbjct: 919 RVLRLNQNIRPWVKQIDTLAAEYPAATNYLYCTYHGQEHDLDFKDHGTMVVG 970
>UNIPROTKB|P31327 [details] [associations]
symbol:CPS1 "Carbamoyl-phosphate synthase [ammonia],
mitochondrial" species:9606 "Homo sapiens" [GO:0006543 "glutamine
catabolic process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0032496 "response to
lipopolysaccharide" evidence=IDA] [GO:0070409 "carbamoyl phosphate
biosynthetic process" evidence=IMP] [GO:0050667 "homocysteine
metabolic process" evidence=IDA] [GO:0072341 "modified amino acid
binding" evidence=IDA] [GO:0000050 "urea cycle" evidence=NAS;TAS]
[GO:0005759 "mitochondrial matrix" evidence=TAS] [GO:0034641
"cellular nitrogen compound metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004087
"carbamoyl-phosphate synthase (ammonia) activity" evidence=IMP]
[GO:0005980 "glycogen catabolic process" evidence=IMP] [GO:0019433
"triglyceride catabolic process" evidence=IMP] [GO:0019240
"citrulline biosynthetic process" evidence=NAS] [GO:0046209 "nitric
oxide metabolic process" evidence=IMP] [GO:0045909 "positive
regulation of vasodilation" evidence=IMP] [GO:0042645
"mitochondrial nucleoid" evidence=IDA] Reactome:REACT_111217
InterPro:IPR005479 InterPro:IPR005481 InterPro:IPR005483
InterPro:IPR006274 InterPro:IPR006275 InterPro:IPR011761
InterPro:IPR013815 InterPro:IPR013816 Pfam:PF00289 Pfam:PF02786
PRINTS:PR00098 PROSITE:PS00866 PROSITE:PS00867 PROSITE:PS50975
InterPro:IPR016185 Pfam:PF00117 Pfam:PF02787 GO:GO:0005524
GO:GO:0043234 GO:GO:0005730 GO:GO:0005743 GO:GO:0071320
GO:GO:0044344 GO:GO:0042493 GO:GO:0005543 GO:GO:0010043
EMBL:CH471063 GO:GO:0032496 GO:GO:0005509 GO:GO:0045909
GO:GO:0042594 GO:GO:0007494 GO:GO:0019433 GO:GO:0055081
GO:GO:0071400 Gene3D:3.30.1490.20 Gene3D:3.30.470.20
Gene3D:3.40.50.20 SUPFAM:SSF52440 GO:GO:0042645 GO:GO:0004175
GO:GO:0032094 GO:GO:0071377 GO:GO:0005980 GO:GO:0043200
GO:GO:0070365 GO:GO:0000050 GO:GO:0014075 GO:GO:0060416
GO:GO:0071548 GO:GO:0046209 GO:GO:0070409 GO:GO:0006543
Gene3D:3.50.30.20 InterPro:IPR002474 InterPro:IPR017926
Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021 TIGRFAMs:TIGR01368
PROSITE:PS51273 eggNOG:COG0458 HOGENOM:HOG000234583
Gene3D:1.10.1030.10 Gene3D:3.40.50.1380 InterPro:IPR005480
InterPro:IPR011607 Pfam:PF02142 SMART:SM01096 SMART:SM00851
SUPFAM:SSF48108 SUPFAM:SSF52335 TIGRFAMs:TIGR01369 GO:GO:0004087
GO:GO:0072341 GO:GO:0050667 EMBL:D90282 EMBL:Y15793 EMBL:AF154830
EMBL:AY317138 EMBL:AY167007 EMBL:AY166970 EMBL:AY166971
EMBL:AY166972 EMBL:AY166973 EMBL:AY166974 EMBL:AY166975
EMBL:AY166976 EMBL:AY166977 EMBL:AY166978 EMBL:AY166979
EMBL:AY166980 EMBL:AY166981 EMBL:AY166982 EMBL:AY166983
EMBL:AY166984 EMBL:AY166985 EMBL:AY166986 EMBL:AY166987
EMBL:AY166988 EMBL:AY166989 EMBL:AY166990 EMBL:AY166991
EMBL:AY166992 EMBL:AY166993 EMBL:AY166994 EMBL:AY166995
EMBL:AY166996 EMBL:AY166997 EMBL:AY166998 EMBL:AY166999
EMBL:AY167000 EMBL:AY167001 EMBL:AY167002 EMBL:AY167003
EMBL:AY167004 EMBL:AY167005 EMBL:AY167006 EMBL:AF536523
EMBL:AK302778 EMBL:AC008172 EMBL:BC140943 EMBL:BX640601
IPI:IPI00011062 IPI:IPI00397498 PIR:JQ1348 RefSeq:NP_001116105.1
RefSeq:NP_001116106.1 RefSeq:NP_001866.2 UniGene:Hs.149252 PDB:2YVQ
PDBsum:2YVQ ProteinModelPortal:P31327 SMR:P31327 IntAct:P31327
MINT:MINT-4991575 STRING:P31327 MEROPS:C26.951 PhosphoSite:P31327
DMDM:4033707 PaxDb:P31327 PRIDE:P31327 Ensembl:ENST00000233072
Ensembl:ENST00000451903 GeneID:1373 KEGG:hsa:1373 UCSC:uc002vee.4
CTD:1373 GeneCards:GC02P211342 HGNC:HGNC:2323 HPA:CAB003781
HPA:HPA021400 MIM:237300 MIM:608307 neXtProt:NX_P31327 Orphanet:147
PharmGKB:PA26840 HOVERGEN:HBG000279 InParanoid:P31327 KO:K01948
OrthoDB:EOG45MN4G PhylomeDB:P31327 BioCyc:MetaCyc:HS00415-MONOMER
BRENDA:6.3.4.16 SABIO-RK:P31327 ChiTaRS:CPS1
EvolutionaryTrace:P31327 GenomeRNAi:1373 NextBio:5565
ArrayExpress:P31327 Bgee:P31327 CleanEx:HS_CPS1
Genevestigator:P31327 GermOnline:ENSG00000021826 GO:GO:0016595
GO:GO:0019240 Uniprot:P31327
Length = 1500
Score = 416 (151.5 bits), Expect = 1.1e-67, Sum P(3) = 1.1e-67
Identities = 86/186 (46%), Positives = 118/186 (63%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDK-DEHGILKYFESHRIWISGL 62
VF TG+ GYPEA+TDP+Y QIL + P+IGN G P DE G+ KY ES+ I +SGL
Sbjct: 72 VFNTGLGGYPEAITDPAYKGQILTMANPIIGNGGAPDTTALDELGLSKYLESNGIKVSGL 131
Query: 63 IVGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPL 122
+V D +HW + +LG+WL+ +PA+ VDTR LTK IR+ G + GKI P+
Sbjct: 132 LVLDYSKDYNHWLATKSLGQWLQEEKVPAIYGVDTRMLTKIIRDKGTMLGKIEFEG-QPV 190
Query: 123 AVTVEDLVFVDPNRGNLVDQVSTKEVVTYNPTGSVHLCVVDCGLKYNQLRCLIQRGAKLS 182
D FVDPN+ NL+ +VSTK+V Y + VDCG+K N +R L++RGA++
Sbjct: 191 -----D--FVDPNKQNLIAEVSTKDVKVYGKGNPTKVVAVDCGIKNNVIRLLVKRGAEVH 243
Query: 183 VIPWNH 188
++PWNH
Sbjct: 244 LVPWNH 249
Score = 212 (79.7 bits), Expect = 1.1e-67, Sum P(3) = 1.1e-67
Identities = 48/112 (42%), Positives = 62/112 (55%)
Query: 192 VPQGWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRDSKTR 251
+P GW+PLF N ND TNEGI+HES PFF+VQFHPE T GP D E LFD F + ++ K
Sbjct: 345 LPAGWKPLFVNVNDQTNEGIMHESKPFFAVQFHPEVTPGPIDTEYLFDSFFSLIKKGKAT 404
Query: 252 T-----PVPPI---RKTIYDTLVPKDEALI---AKSFQTPKKTSVRKMREDN 292
T P P + R + L+ L A F +V+ M+E+N
Sbjct: 405 TITSVLPKPALVASRVEVSKVLILGSGGLSIGQAGEFDYSGSQAVKAMKEEN 456
Score = 131 (51.2 bits), Expect = 1.1e-67, Sum P(3) = 1.1e-67
Identities = 24/45 (53%), Positives = 32/45 (71%)
Query: 282 KTSVRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDL 326
+ R++R I P+ KQIDTLAAE+P+ TNYLY+TYN HD+
Sbjct: 925 EAQTRELRLKKNIHPWVKQIDTLAAEYPSVTNYLYVTYNGQEHDV 969
Score = 37 (18.1 bits), Expect = 3.0e-38, Sum P(2) = 3.0e-38
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 278 QTPKKTSVRKMREDNGI 294
Q P +S+RK+ D I
Sbjct: 1416 QNPSLSSIRKLIRDGSI 1432
>UNIPROTKB|J3KQL0 [details] [associations]
symbol:CPS1 "Carbamoyl-phosphate synthase [ammonia],
mitochondrial" species:9606 "Homo sapiens" [GO:0006543 "glutamine
catabolic process" evidence=IEA] [GO:0070409 "carbamoyl phosphate
biosynthetic process" evidence=IEA] [GO:0000050 "urea cycle"
evidence=IEA] [GO:0004087 "carbamoyl-phosphate synthase (ammonia)
activity" evidence=IEA] [GO:0004175 "endopeptidase activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007494 "midgut development" evidence=IEA]
[GO:0009636 "response to toxic substance" evidence=IEA] [GO:0010043
"response to zinc ion" evidence=IEA] [GO:0014075 "response to amine
stimulus" evidence=IEA] [GO:0016595 "glutamate binding"
evidence=IEA] [GO:0032094 "response to food" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0032496
"response to lipopolysaccharide" evidence=IEA] [GO:0042493
"response to drug" evidence=IEA] [GO:0042594 "response to
starvation" evidence=IEA] [GO:0043200 "response to amino acid
stimulus" evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0044344 "cellular response to fibroblast growth factor
stimulus" evidence=IEA] [GO:0055081 "anion homeostasis"
evidence=IEA] [GO:0060416 "response to growth hormone stimulus"
evidence=IEA] [GO:0070365 "hepatocyte differentiation"
evidence=IEA] [GO:0071320 "cellular response to cAMP" evidence=IEA]
[GO:0071377 "cellular response to glucagon stimulus" evidence=IEA]
[GO:0071400 "cellular response to oleic acid" evidence=IEA]
[GO:0071548 "response to dexamethasone stimulus" evidence=IEA]
HAMAP:MF_01209 InterPro:IPR005479 InterPro:IPR005481
InterPro:IPR005483 InterPro:IPR006274 InterPro:IPR006275
InterPro:IPR011761 InterPro:IPR013815 InterPro:IPR013816
Pfam:PF00289 Pfam:PF02786 PRINTS:PR00098 PROSITE:PS00866
PROSITE:PS00867 PROSITE:PS50975 InterPro:IPR016185 Pfam:PF00117
Pfam:PF02787 GO:GO:0005524 GO:GO:0003824 GO:GO:0046872
Gene3D:3.30.1490.20 Gene3D:3.30.470.20 Gene3D:3.40.50.20
SUPFAM:SSF52440 GO:GO:0070409 GO:GO:0006543 Gene3D:3.50.30.20
InterPro:IPR002474 InterPro:IPR017926 Pfam:PF00988 SMART:SM01097
SUPFAM:SSF52021 TIGRFAMs:TIGR01368 PROSITE:PS51273
Gene3D:1.10.1030.10 Gene3D:3.40.50.1380 InterPro:IPR005480
InterPro:IPR011607 Pfam:PF02142 SMART:SM01096 SMART:SM00851
SUPFAM:SSF48108 SUPFAM:SSF52335 TIGRFAMs:TIGR01369 EMBL:AC008172
RefSeq:NP_001116105.1 UniGene:Hs.149252 GeneID:1373 KEGG:hsa:1373
CTD:1373 HGNC:HGNC:2323 KO:K01948 ChiTaRS:CPS1 EMBL:AC007970
ProteinModelPortal:J3KQL0 Ensembl:ENST00000430249 Uniprot:J3KQL0
Length = 1506
Score = 416 (151.5 bits), Expect = 1.1e-67, Sum P(3) = 1.1e-67
Identities = 86/186 (46%), Positives = 118/186 (63%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDK-DEHGILKYFESHRIWISGL 62
VF TG+ GYPEA+TDP+Y QIL + P+IGN G P DE G+ KY ES+ I +SGL
Sbjct: 78 VFNTGLGGYPEAITDPAYKGQILTMANPIIGNGGAPDTTALDELGLSKYLESNGIKVSGL 137
Query: 63 IVGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPL 122
+V D +HW + +LG+WL+ +PA+ VDTR LTK IR+ G + GKI P+
Sbjct: 138 LVLDYSKDYNHWLATKSLGQWLQEEKVPAIYGVDTRMLTKIIRDKGTMLGKIEFEG-QPV 196
Query: 123 AVTVEDLVFVDPNRGNLVDQVSTKEVVTYNPTGSVHLCVVDCGLKYNQLRCLIQRGAKLS 182
D FVDPN+ NL+ +VSTK+V Y + VDCG+K N +R L++RGA++
Sbjct: 197 -----D--FVDPNKQNLIAEVSTKDVKVYGKGNPTKVVAVDCGIKNNVIRLLVKRGAEVH 249
Query: 183 VIPWNH 188
++PWNH
Sbjct: 250 LVPWNH 255
Score = 212 (79.7 bits), Expect = 1.1e-67, Sum P(3) = 1.1e-67
Identities = 48/112 (42%), Positives = 62/112 (55%)
Query: 192 VPQGWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRDSKTR 251
+P GW+PLF N ND TNEGI+HES PFF+VQFHPE T GP D E LFD F + ++ K
Sbjct: 351 LPAGWKPLFVNVNDQTNEGIMHESKPFFAVQFHPEVTPGPIDTEYLFDSFFSLIKKGKAT 410
Query: 252 T-----PVPPI---RKTIYDTLVPKDEALI---AKSFQTPKKTSVRKMREDN 292
T P P + R + L+ L A F +V+ M+E+N
Sbjct: 411 TITSVLPKPALVASRVEVSKVLILGSGGLSIGQAGEFDYSGSQAVKAMKEEN 462
Score = 131 (51.2 bits), Expect = 1.1e-67, Sum P(3) = 1.1e-67
Identities = 24/45 (53%), Positives = 32/45 (71%)
Query: 282 KTSVRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDL 326
+ R++R I P+ KQIDTLAAE+P+ TNYLY+TYN HD+
Sbjct: 931 EAQTRELRLKKNIHPWVKQIDTLAAEYPSVTNYLYVTYNGQEHDV 975
Score = 37 (18.1 bits), Expect = 3.1e-38, Sum P(2) = 3.1e-38
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 278 QTPKKTSVRKMREDNGI 294
Q P +S+RK+ D I
Sbjct: 1422 QNPSLSSIRKLIRDGSI 1438
>UNIPROTKB|F1SSS0 [details] [associations]
symbol:CPS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070409 "carbamoyl phosphate biosynthetic process"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006543 "glutamine catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] HAMAP:MF_01209 InterPro:IPR005479 InterPro:IPR005481
InterPro:IPR005483 InterPro:IPR006274 InterPro:IPR006275
InterPro:IPR011761 InterPro:IPR013815 InterPro:IPR013816
Pfam:PF00289 Pfam:PF02786 PRINTS:PR00098 PROSITE:PS00866
PROSITE:PS00867 PROSITE:PS50975 InterPro:IPR016185 Pfam:PF00117
Pfam:PF02787 GO:GO:0005524 GO:GO:0003824 GO:GO:0046872
Gene3D:3.30.1490.20 Gene3D:3.30.470.20 Gene3D:3.40.50.20
SUPFAM:SSF52440 GO:GO:0070409 GO:GO:0006543 Gene3D:3.50.30.20
InterPro:IPR002474 InterPro:IPR017926 Pfam:PF00988 SMART:SM01097
SUPFAM:SSF52021 TIGRFAMs:TIGR01368 PROSITE:PS51273 OMA:PMANLAT
Gene3D:1.10.1030.10 Gene3D:3.40.50.1380 InterPro:IPR005480
InterPro:IPR011607 Pfam:PF02142 SMART:SM01096 SMART:SM00851
SUPFAM:SSF48108 SUPFAM:SSF52335 TIGRFAMs:TIGR01369
GeneTree:ENSGT00390000015604 EMBL:FP102483 EMBL:FP565740
Ensembl:ENSSSCT00000017594 Uniprot:F1SSS0
Length = 1458
Score = 417 (151.9 bits), Expect = 1.5e-67, Sum P(3) = 1.5e-67
Identities = 83/186 (44%), Positives = 116/186 (62%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDK-DEHGILKYFESHRIWISGL 62
VF TG+ GYPEA+TDP+Y QIL + P++GN G P DE G+ KY ES I ++GL
Sbjct: 30 VFNTGLAGYPEALTDPAYKGQILTMANPIVGNGGAPDTTALDELGLSKYMESDGIKVAGL 89
Query: 63 IVGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPL 122
+V + D HW + +LG+WL+ +PA+ VDTR LTK IR+ G + GKI
Sbjct: 90 LVLNYSDDYHHWLATKSLGQWLQEEKVPAVYGVDTRMLTKIIRDKGTMLGKIEFEG---- 145
Query: 123 AVTVEDLVFVDPNRGNLVDQVSTKEVVTYNPTGSVHLCVVDCGLKYNQLRCLIQRGAKLS 182
+ + FVDPN+ NL+ +VSTK+V Y + VDCG+K N +R L++RGA++
Sbjct: 146 ----QSVDFVDPNKQNLIAEVSTKDVKVYGKGNPTKVVAVDCGIKNNVIRLLVKRGAEVH 201
Query: 183 VIPWNH 188
V+PWNH
Sbjct: 202 VVPWNH 207
Score = 205 (77.2 bits), Expect = 1.5e-67, Sum P(3) = 1.5e-67
Identities = 43/87 (49%), Positives = 54/87 (62%)
Query: 192 VPQGWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRDSK-- 249
+P GW+PLF N ND TNEGI+HES PFF VQFHPE + GP D E LFD F + ++ K
Sbjct: 303 LPAGWKPLFVNVNDQTNEGIMHESKPFFGVQFHPEVSPGPLDTEYLFDSFFSLIKKGKGT 362
Query: 250 TRTPVPPIRKTIYDTLVPKDEALIAKS 276
T T V P + + + V + LI S
Sbjct: 363 TITSVLP-KPALVASRVEVSKVLILGS 388
Score = 135 (52.6 bits), Expect = 1.5e-67, Sum P(3) = 1.5e-67
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 282 KTSVRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDLAVKETVSIIKG 337
+ R++R I P+ KQIDTLAAE+P+ TNYLY+TYN HD+ E ++ G
Sbjct: 883 EAQTRELRLKKNIHPWVKQIDTLAAEYPSVTNYLYVTYNGQEHDINFDEHGMMVLG 938
Score = 37 (18.1 bits), Expect = 2.7e-57, Sum P(3) = 2.7e-57
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 278 QTPKKTSVRKMREDNGI 294
Q P +S+RK+ D I
Sbjct: 1374 QNPSLSSIRKLIRDGSI 1390
>UNIPROTKB|F1PJF3 [details] [associations]
symbol:CPS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0072341 "modified amino acid binding"
evidence=IEA] [GO:0050667 "homocysteine metabolic process"
evidence=IEA] [GO:0046209 "nitric oxide metabolic process"
evidence=IEA] [GO:0045909 "positive regulation of vasodilation"
evidence=IEA] [GO:0042645 "mitochondrial nucleoid" evidence=IEA]
[GO:0019433 "triglyceride catabolic process" evidence=IEA]
[GO:0005980 "glycogen catabolic process" evidence=IEA] [GO:0004087
"carbamoyl-phosphate synthase (ammonia) activity" evidence=IEA]
[GO:0070409 "carbamoyl phosphate biosynthetic process"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006543 "glutamine catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] HAMAP:MF_01209 InterPro:IPR005479
InterPro:IPR005481 InterPro:IPR005483 InterPro:IPR006274
InterPro:IPR006275 InterPro:IPR011761 InterPro:IPR013815
InterPro:IPR013816 Pfam:PF00289 Pfam:PF02786 PRINTS:PR00098
PROSITE:PS00866 PROSITE:PS00867 PROSITE:PS50975 InterPro:IPR016185
Pfam:PF00117 Pfam:PF02787 GO:GO:0005524 GO:GO:0046872 GO:GO:0045909
GO:GO:0019433 Gene3D:3.30.1490.20 Gene3D:3.30.470.20
Gene3D:3.40.50.20 SUPFAM:SSF52440 GO:GO:0042645 GO:GO:0005980
GO:GO:0046209 GO:GO:0070409 GO:GO:0006543 Gene3D:3.50.30.20
InterPro:IPR002474 InterPro:IPR017926 Pfam:PF00988 SMART:SM01097
SUPFAM:SSF52021 TIGRFAMs:TIGR01368 PROSITE:PS51273 OMA:PMANLAT
Gene3D:1.10.1030.10 Gene3D:3.40.50.1380 InterPro:IPR005480
InterPro:IPR011607 Pfam:PF02142 SMART:SM01096 SMART:SM00851
SUPFAM:SSF48108 SUPFAM:SSF52335 TIGRFAMs:TIGR01369 GO:GO:0004087
GeneTree:ENSGT00390000015604 GO:GO:0072341 GO:GO:0050667 CTD:1373
KO:K01948 EMBL:AAEX03018087 RefSeq:XP_545627.2
Ensembl:ENSCAFT00000022222 GeneID:488506 KEGG:cfa:488506
Uniprot:F1PJF3
Length = 1500
Score = 416 (151.5 bits), Expect = 3.5e-67, Sum P(3) = 3.5e-67
Identities = 83/186 (44%), Positives = 116/186 (62%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDK-DEHGILKYFESHRIWISGL 62
VF TG+ GYPEA+TDP+Y QIL + P+IGN G P DE G+ KY ES I ++GL
Sbjct: 72 VFNTGLAGYPEALTDPAYKGQILTMANPIIGNGGAPDTTALDELGLSKYLESDGIKVAGL 131
Query: 63 IVGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPL 122
+V + D HW + +LG+WL+ +PA+ VDTR LTK IR+ G + GKI
Sbjct: 132 LVLNYSDDYHHWLATKSLGQWLQEEKVPAIYGVDTRMLTKIIRDKGTMLGKIEFEG---- 187
Query: 123 AVTVEDLVFVDPNRGNLVDQVSTKEVVTYNPTGSVHLCVVDCGLKYNQLRCLIQRGAKLS 182
+ + FVDPN+ NL+ +VSTK+V Y + VDCG+K N +R L++RGA++
Sbjct: 188 ----QSVDFVDPNKQNLIAEVSTKDVKVYGKGNPTKVVAVDCGIKNNVIRLLVKRGAEVH 243
Query: 183 VIPWNH 188
++PWNH
Sbjct: 244 LVPWNH 249
Score = 206 (77.6 bits), Expect = 3.5e-67, Sum P(3) = 3.5e-67
Identities = 43/87 (49%), Positives = 54/87 (62%)
Query: 192 VPQGWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRDSK-- 249
+P GW+PLF N ND TNEGI+HES PFF VQFHPE + GP D E LFD F + ++ K
Sbjct: 345 LPAGWKPLFVNVNDQTNEGIMHESKPFFGVQFHPEVSPGPTDTEYLFDSFFSLIKKGKGT 404
Query: 250 TRTPVPPIRKTIYDTLVPKDEALIAKS 276
T T V P + + + V + LI S
Sbjct: 405 TITSVLP-KPALVASRVEVSKVLILGS 430
Score = 132 (51.5 bits), Expect = 3.5e-67, Sum P(3) = 3.5e-67
Identities = 24/45 (53%), Positives = 32/45 (71%)
Query: 282 KTSVRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDL 326
+ R++R I P+ KQIDTLAAE+P+ TNYLY+TYN HD+
Sbjct: 925 EAQTRELRLKKNIHPWVKQIDTLAAEYPSVTNYLYVTYNGQEHDI 969
Score = 39 (18.8 bits), Expect = 1.9e-57, Sum P(3) = 1.9e-57
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 278 QTPKKTSVRKMREDNGI 294
Q P +S+RK+ D I
Sbjct: 1416 QNPSLSSIRKLMRDGSI 1432
>UNIPROTKB|F1MVC0 [details] [associations]
symbol:CAD "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019899 "enzyme binding" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0070409 "carbamoyl phosphate biosynthetic process"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016812 "hydrolase activity, acting on carbon-nitrogen (but not
peptide) bonds, in cyclic amides" evidence=IEA] [GO:0016597 "amino
acid binding" evidence=IEA] [GO:0006543 "glutamine catabolic
process" evidence=IEA] [GO:0006207 "'de novo' pyrimidine nucleobase
biosynthetic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004070 "aspartate carbamoyltransferase activity"
evidence=IEA] HAMAP:MF_00001 HAMAP:MF_01209 InterPro:IPR002082
InterPro:IPR002195 InterPro:IPR005479 InterPro:IPR005481
InterPro:IPR005483 InterPro:IPR006130 InterPro:IPR006131
InterPro:IPR006132 InterPro:IPR006274 InterPro:IPR006275
InterPro:IPR011059 InterPro:IPR011761 InterPro:IPR013815
InterPro:IPR013816 Pfam:PF00185 Pfam:PF00289 Pfam:PF02729
Pfam:PF02786 PRINTS:PR00098 PRINTS:PR00100 PRINTS:PR00101
PROSITE:PS00097 PROSITE:PS00482 PROSITE:PS00483 PROSITE:PS00866
PROSITE:PS00867 PROSITE:PS50975 InterPro:IPR016185 Pfam:PF00117
Pfam:PF02787 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
GO:GO:0016597 Gene3D:3.30.1490.20 Gene3D:3.30.470.20
Gene3D:3.40.50.20 SUPFAM:SSF52440 SUPFAM:SSF51338 GO:GO:0016363
GO:GO:0070409 GO:GO:0006543 Gene3D:3.50.30.20 InterPro:IPR002474
InterPro:IPR017926 Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021
TIGRFAMs:TIGR01368 PROSITE:PS51273 GO:GO:0006207
Gene3D:1.10.1030.10 InterPro:IPR005480 InterPro:IPR011607
Pfam:PF02142 SMART:SM01096 SUPFAM:SSF48108 SUPFAM:SSF52335
TIGRFAMs:TIGR01369 GeneTree:ENSGT00390000015604 GO:GO:0016812
SUPFAM:SSF53671 OMA:QRPVHIC GO:GO:0004070 TIGRFAMs:TIGR00670
EMBL:DAAA02031594 EMBL:DAAA02031595 IPI:IPI01017661
Ensembl:ENSBTAT00000023783 Uniprot:F1MVC0
Length = 2225
Score = 579 (208.9 bits), Expect = 4.1e-67, Sum P(2) = 4.1e-67
Identities = 110/203 (54%), Positives = 142/203 (69%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLI 63
VFQTGMVGYPEA+TDPSY QILVLTYPLIGNYG+PP + DE G+ K+FES I ++GL+
Sbjct: 28 VFQTGMVGYPEALTDPSYKAQILVLTYPLIGNYGIPPDEVDEFGLSKWFESSGIHVAGLV 87
Query: 64 VGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPLA 123
VG+ C TPSHW+++ TL EWL+ H IP L VDTR LTK +RE G + GK+V P
Sbjct: 88 VGECCPTPSHWSASCTLHEWLQQHGIPGLQGVDTRELTKKLREQGSLLGKLVQDGTEP-- 145
Query: 124 VTVEDLVFVDPNRGNLVDQVSTKEVVTYNPTGSVHLCVVDCGLKYNQLRCLIQRGAKLSV 183
L F+DPN LV +VSTK +N G+ + +DCGLKYNQ+RCL QRGA+++V
Sbjct: 146 ---STLPFLDPNARPLVPEVSTKVPQVFNAGGTPRILALDCGLKYNQVRCLCQRGAEVTV 202
Query: 184 IPWNHPIKVPQGWQPLFTNANDG 206
+PW+H + Q ++ LF + G
Sbjct: 203 VPWDHALD-SQEYEGLFLSNGPG 224
Score = 252 (93.8 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 50/91 (54%), Positives = 61/91 (67%)
Query: 168 YNQLRCLIQRGAKLSVIPWNHPIKV-----PQGWQPLFTNANDGTNEGIVHESLPFFSVQ 222
+NQ CL+ + + NH V P W PLFTNAND +NEGIVHESLPFFSVQ
Sbjct: 276 HNQ-PCLLVGSGRCFLTSQNHGFAVETDSLPASWLPLFTNANDHSNEGIVHESLPFFSVQ 334
Query: 223 FHPEHTAGPADLELLFDIFINAVRDSKTRTP 253
FHPEH AGP+D+ELLFDIF+ V+++ P
Sbjct: 335 FHPEHQAGPSDMELLFDIFLETVKETAAGNP 365
Score = 152 (58.6 bits), Expect = 4.1e-67, Sum P(2) = 4.1e-67
Identities = 31/54 (57%), Positives = 39/54 (72%)
Query: 284 SVRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDLAVKETVSIIKG 337
+VRK+R++ GI P KQIDT+AAE PAQTNYLYLTY T HDL + ++ G
Sbjct: 887 AVRKLRQELGICPAVKQIDTVAAEWPAQTNYLYLTYWGTTHDLTFRTPHVLVLG 940
>UNIPROTKB|F1ML89 [details] [associations]
symbol:CPS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006543 "glutamine catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0072341 "modified amino
acid binding" evidence=IEA] [GO:0050667 "homocysteine metabolic
process" evidence=IEA] [GO:0046209 "nitric oxide metabolic process"
evidence=IEA] [GO:0045909 "positive regulation of vasodilation"
evidence=IEA] [GO:0042645 "mitochondrial nucleoid" evidence=IEA]
[GO:0019433 "triglyceride catabolic process" evidence=IEA]
[GO:0005980 "glycogen catabolic process" evidence=IEA] [GO:0004087
"carbamoyl-phosphate synthase (ammonia) activity" evidence=IEA]
[GO:0070409 "carbamoyl phosphate biosynthetic process"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
HAMAP:MF_01209 InterPro:IPR005479 InterPro:IPR005481
InterPro:IPR005483 InterPro:IPR006274 InterPro:IPR006275
InterPro:IPR011761 InterPro:IPR013815 InterPro:IPR013816
Pfam:PF00289 Pfam:PF02786 PRINTS:PR00098 PROSITE:PS00866
PROSITE:PS00867 PROSITE:PS50975 InterPro:IPR016185 Pfam:PF00117
Pfam:PF02787 GO:GO:0005524 GO:GO:0046872 GO:GO:0045909
GO:GO:0019433 Gene3D:3.30.1490.20 Gene3D:3.30.470.20
Gene3D:3.40.50.20 SUPFAM:SSF52440 GO:GO:0042645 GO:GO:0005980
GO:GO:0046209 GO:GO:0070409 GO:GO:0006543 Gene3D:3.50.30.20
InterPro:IPR002474 InterPro:IPR017926 Pfam:PF00988 SMART:SM01097
SUPFAM:SSF52021 TIGRFAMs:TIGR01368 PROSITE:PS51273 OMA:PMANLAT
Gene3D:1.10.1030.10 Gene3D:3.40.50.1380 InterPro:IPR005480
InterPro:IPR011607 Pfam:PF02142 SMART:SM01096 SMART:SM00851
SUPFAM:SSF48108 SUPFAM:SSF52335 TIGRFAMs:TIGR01369 GO:GO:0004087
GeneTree:ENSGT00390000015604 GO:GO:0072341 GO:GO:0050667 CTD:1373
KO:K01948 EMBL:DAAA02005750 EMBL:DAAA02005751 EMBL:DAAA02005752
EMBL:DAAA02005753 EMBL:DAAA02005754 EMBL:DAAA02005755
IPI:IPI00716914 RefSeq:NP_001179187.1 UniGene:Bt.57999
ProteinModelPortal:F1ML89 Ensembl:ENSBTAT00000022158 GeneID:510506
KEGG:bta:510506 NextBio:20869479 Uniprot:F1ML89
Length = 1500
Score = 416 (151.5 bits), Expect = 4.5e-67, Sum P(3) = 4.5e-67
Identities = 82/186 (44%), Positives = 117/186 (62%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDK-DEHGILKYFESHRIWISGL 62
VF TG+ GYPEA+TDP+Y QIL + P++GN G P DE G+ KY ES I ++GL
Sbjct: 72 VFNTGLAGYPEALTDPAYKGQILTMANPIVGNGGAPDTAALDELGLSKYLESDGIKVAGL 131
Query: 63 IVGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPL 122
+V + D HW + +LG+WLR +PA+ VDTR LTK IR+ G + GKI
Sbjct: 132 LVLNYSDDYHHWLATKSLGQWLREEKVPAIYGVDTRMLTKIIRDKGTMLGKIEFEG---- 187
Query: 123 AVTVEDLVFVDPNRGNLVDQVSTKEVVTYNPTGSVHLCVVDCGLKYNQLRCLIQRGAKLS 182
+ + FVDPN+ NL+ ++STK+V Y + + VDCG+K + +R L++RGA++
Sbjct: 188 ----QSVDFVDPNKQNLIAEISTKDVKVYGKGNPMKVVAVDCGIKNSVIRLLVKRGAEVH 243
Query: 183 VIPWNH 188
V+PWNH
Sbjct: 244 VVPWNH 249
Score = 205 (77.2 bits), Expect = 4.5e-67, Sum P(3) = 4.5e-67
Identities = 39/67 (58%), Positives = 46/67 (68%)
Query: 192 VPQGWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRDSK-- 249
+P GW+PLF N ND TNEGI+HES PFF VQFHPE GP D E LFD F++ ++ K
Sbjct: 345 LPAGWKPLFVNVNDQTNEGIMHESKPFFGVQFHPEVGPGPTDTEYLFDSFVSLIKKEKGT 404
Query: 250 TRTPVPP 256
T T V P
Sbjct: 405 TITSVLP 411
Score = 132 (51.5 bits), Expect = 4.5e-67, Sum P(3) = 4.5e-67
Identities = 24/45 (53%), Positives = 32/45 (71%)
Query: 282 KTSVRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDL 326
+ R++R I P+ KQIDTLAAE+P+ TNYLY+TYN HD+
Sbjct: 925 EAQTRELRLKKNIHPWVKQIDTLAAEYPSVTNYLYVTYNGQEHDI 969
>MGI|MGI:891996 [details] [associations]
symbol:Cps1 "carbamoyl-phosphate synthetase 1" species:10090
"Mus musculus" [GO:0000050 "urea cycle" evidence=ISO;IC]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004087 "carbamoyl-phosphate
synthase (ammonia) activity" evidence=ISO;IMP] [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005509 "calcium ion
binding" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005543 "phospholipid
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0005980 "glycogen catabolic process"
evidence=ISO] [GO:0006543 "glutamine catabolic process"
evidence=IEA] [GO:0006807 "nitrogen compound metabolic process"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IMP]
[GO:0016595 "glutamate binding" evidence=ISO] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0019433 "triglyceride catabolic
process" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032496 "response to lipopolysaccharide"
evidence=ISO] [GO:0042645 "mitochondrial nucleoid" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045909 "positive
regulation of vasodilation" evidence=ISO] [GO:0046209 "nitric oxide
metabolic process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050667 "homocysteine metabolic process"
evidence=ISO] [GO:0055081 "anion homeostasis" evidence=ISO]
[GO:0070409 "carbamoyl phosphate biosynthetic process"
evidence=ISO] [GO:0072341 "modified amino acid binding"
evidence=ISO] InterPro:IPR005479 InterPro:IPR005481
InterPro:IPR005483 InterPro:IPR006274 InterPro:IPR006275
InterPro:IPR011761 InterPro:IPR013815 InterPro:IPR013816
Pfam:PF00289 Pfam:PF02786 PRINTS:PR00098 PROSITE:PS00866
PROSITE:PS00867 PROSITE:PS50975 InterPro:IPR016185 Pfam:PF00117
Pfam:PF02787 MGI:MGI:891996 GO:GO:0005739 GO:GO:0005524
GO:GO:0043234 GO:GO:0005730 GO:GO:0005743 GO:GO:0071320
GO:GO:0044344 GO:GO:0042493 GO:GO:0005543 GO:GO:0010043
GO:GO:0032496 GO:GO:0005509 GO:GO:0045909 GO:GO:0042594
GO:GO:0007494 GO:GO:0019433 GO:GO:0055081 GO:GO:0071400
Gene3D:3.30.1490.20 Gene3D:3.30.470.20 Gene3D:3.40.50.20
SUPFAM:SSF52440 GO:GO:0042645 GO:GO:0004175 GO:GO:0032094
GO:GO:0071377 GO:GO:0005980 GO:GO:0043200 GO:GO:0070365
GO:GO:0000050 GO:GO:0014075 GO:GO:0060416 GO:GO:0071548
GO:GO:0046209 GO:GO:0070409 GO:GO:0006543 Gene3D:3.50.30.20
InterPro:IPR002474 InterPro:IPR017926 Pfam:PF00988 SMART:SM01097
SUPFAM:SSF52021 TIGRFAMs:TIGR01368 PROSITE:PS51273 eggNOG:COG0458
HOGENOM:HOG000234583 Gene3D:1.10.1030.10 Gene3D:3.40.50.1380
InterPro:IPR005480 InterPro:IPR011607 Pfam:PF02142 SMART:SM01096
SMART:SM00851 SUPFAM:SSF48108 SUPFAM:SSF52335 TIGRFAMs:TIGR01369
GO:GO:0004087 OMA:SEFFEIV GeneTree:ENSGT00390000015604
GO:GO:0072341 GO:GO:0050667 CTD:1373 HOVERGEN:HBG000279 KO:K01948
OrthoDB:EOG45MN4G GO:GO:0016595 EMBL:AC101854 EMBL:AC133187
EMBL:BC067211 EMBL:BC126969 EMBL:AK028683 IPI:IPI00111908
RefSeq:NP_001074278.1 UniGene:Mm.343942 ProteinModelPortal:Q8C196
SMR:Q8C196 IntAct:Q8C196 STRING:Q8C196 PhosphoSite:Q8C196
PaxDb:Q8C196 PRIDE:Q8C196 Ensembl:ENSMUST00000027144 GeneID:227231
KEGG:mmu:227231 UCSC:uc007biy.1 InParanoid:A0JNU4 SABIO-RK:Q8C196
NextBio:378522 Bgee:Q8C196 CleanEx:MM_CPS1 Genevestigator:Q8C196
GermOnline:ENSMUSG00000025991 Uniprot:Q8C196
Length = 1500
Score = 408 (148.7 bits), Expect = 9.6e-67, Sum P(3) = 9.6e-67
Identities = 81/186 (43%), Positives = 118/186 (63%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQD-KDEHGILKYFESHRIWISGL 62
VF TG+ GYPEA+TDP+Y QIL + P+IGN G P +DE G+ KY ES I ++GL
Sbjct: 72 VFNTGLGGYPEALTDPAYKGQILTMANPIIGNGGAPDTTARDELGLNKYMESDGIKVAGL 131
Query: 63 IVGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPL 122
+V + + +HW + +LG+WL+ +PA+ VDTR LTK IR+ G + GKI
Sbjct: 132 LVLNYSNDYNHWLATKSLGQWLQEEKVPAIYGVDTRMLTKIIRDKGTMLGKIEFEG---- 187
Query: 123 AVTVEDLVFVDPNRGNLVDQVSTKEVVTYNPTGSVHLCVVDCGLKYNQLRCLIQRGAKLS 182
+ + FVDPN+ NL+ +VSTK+V + + VDCG+K N +R L++RGA++
Sbjct: 188 ----QSVDFVDPNKQNLIAEVSTKDVKVFGKGNPTKVVAVDCGIKNNVIRLLVKRGAEVH 243
Query: 183 VIPWNH 188
++PWNH
Sbjct: 244 LVPWNH 249
Score = 207 (77.9 bits), Expect = 9.6e-67, Sum P(3) = 9.6e-67
Identities = 43/87 (49%), Positives = 55/87 (63%)
Query: 192 VPQGWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRDSK-- 249
+P GW+PLF N ND TNEGI+HES PFF+VQFHPE + GP D E LFD F + ++ K
Sbjct: 345 LPAGWKPLFVNVNDQTNEGIMHESKPFFAVQFHPEVSPGPTDTEYLFDSFFSLIKKGKGT 404
Query: 250 TRTPVPPIRKTIYDTLVPKDEALIAKS 276
T T V P + + + V + LI S
Sbjct: 405 TITSVLP-KPALVASRVEVSKVLILGS 430
Score = 135 (52.6 bits), Expect = 9.6e-67, Sum P(3) = 9.6e-67
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 282 KTSVRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDLAVKETVSIIKG 337
+ R++R I P+ KQIDTLAAE+P+ TNYLY+TYN HD+ E ++ G
Sbjct: 925 EAQTRELRLKKNIHPWVKQIDTLAAEYPSVTNYLYVTYNGQEHDIKFDEHGIMVLG 980
Score = 37 (18.1 bits), Expect = 1.7e-56, Sum P(3) = 1.7e-56
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 278 QTPKKTSVRKMREDNGI 294
Q P +S+RK+ D I
Sbjct: 1416 QNPSLSSIRKLIRDGSI 1432
>UNIPROTKB|F8VPD4 [details] [associations]
symbol:CAD "CAD protein" species:9606 "Homo sapiens"
[GO:0004070 "aspartate carbamoyltransferase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006207 "'de novo'
pyrimidine nucleobase biosynthetic process" evidence=IEA]
[GO:0006543 "glutamine catabolic process" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0016812 "hydrolase activity,
acting on carbon-nitrogen (but not peptide) bonds, in cyclic
amides" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0070409 "carbamoyl phosphate biosynthetic process"
evidence=IEA] HAMAP:MF_00001 HAMAP:MF_01209 InterPro:IPR002082
InterPro:IPR002195 InterPro:IPR005479 InterPro:IPR005481
InterPro:IPR005483 InterPro:IPR006130 InterPro:IPR006131
InterPro:IPR006132 InterPro:IPR006274 InterPro:IPR006275
InterPro:IPR011059 InterPro:IPR011761 InterPro:IPR013816
Pfam:PF00185 Pfam:PF00289 Pfam:PF02729 Pfam:PF02786 PRINTS:PR00098
PRINTS:PR00100 PRINTS:PR00101 PROSITE:PS00097 PROSITE:PS00482
PROSITE:PS00483 PROSITE:PS00866 PROSITE:PS00867 PROSITE:PS50975
InterPro:IPR016185 Pfam:PF00117 Pfam:PF02787 GO:GO:0005524
GO:GO:0046872 GO:GO:0016597 EMBL:AC013403 Gene3D:3.30.470.20
Gene3D:3.40.50.20 SUPFAM:SSF52440 SUPFAM:SSF51338 GO:GO:0070409
GO:GO:0006543 Gene3D:3.50.30.20 InterPro:IPR002474
InterPro:IPR017926 Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021
TIGRFAMs:TIGR01368 PROSITE:PS51273 GO:GO:0006207
Gene3D:1.10.1030.10 Gene3D:3.40.50.1380 InterPro:IPR005480
InterPro:IPR011607 Pfam:PF02142 SMART:SM01096 SMART:SM00851
SUPFAM:SSF48108 SUPFAM:SSF52335 TIGRFAMs:TIGR01369 EMBL:AC013413
GO:GO:0016812 SUPFAM:SSF53671 GO:GO:0004070 TIGRFAMs:TIGR00670
HGNC:HGNC:1424 ChiTaRS:cad IPI:IPI00893035
ProteinModelPortal:F8VPD4 Ensembl:ENST00000403525 UCSC:uc010eyw.3
ArrayExpress:F8VPD4 Bgee:F8VPD4 Uniprot:F8VPD4
Length = 2162
Score = 571 (206.1 bits), Expect = 2.1e-66, Sum P(2) = 2.1e-66
Identities = 108/203 (53%), Positives = 139/203 (68%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLI 63
VFQTGMVGYPEA+TDPSY QILVLTYPLIGNYG+PP + DE G+ K+FES I ++ L+
Sbjct: 28 VFQTGMVGYPEALTDPSYKAQILVLTYPLIGNYGIPPDEMDEFGLCKWFESSGIHVAALV 87
Query: 64 VGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPLA 123
VG+ C TPSHW++ TL EWL+ H IP L VDTR LTK +RE G + GK+V P
Sbjct: 88 VGECCPTPSHWSATRTLHEWLQQHGIPGLQGVDTRELTKKLREQGSLLGKLVQNGTEP-- 145
Query: 124 VTVEDLVFVDPNRGNLVDQVSTKEVVTYNPTGSVHLCVVDCGLKYNQLRCLIQRGAKLSV 183
L F+DPN LV +VS K +N G+ + +DCGLKYNQ+RCL QRGA+++V
Sbjct: 146 ---SSLPFLDPNARPLVPEVSIKTPRVFNTGGAPRILALDCGLKYNQIRCLCQRGAEVTV 202
Query: 184 IPWNHPIKVPQGWQPLFTNANDG 206
+PW+H + Q ++ LF + G
Sbjct: 203 VPWDHALD-SQEYEGLFLSNGPG 224
Score = 263 (97.6 bits), Expect = 5.4e-21, P = 5.4e-21
Identities = 55/124 (44%), Positives = 72/124 (58%)
Query: 168 YNQLRCLIQRGAKLSVIPWNHPIKV-----PQGWQPLFTNANDGTNEGIVHESLPFFSVQ 222
+NQ CL+ + + NH V P W PLFTNANDG+NEGIVH SLPFFSVQ
Sbjct: 276 HNQ-PCLLVGSGRCFLTSQNHGFAVETDSLPADWAPLFTNANDGSNEGIVHNSLPFFSVQ 334
Query: 223 FHPEHTAGPADLELLFDIFINAVRDSKTRTPV-PPIRKTIYDTLVPKDEALIAKSFQTPK 281
FHPEH AGP+D+ELLFDIF+ V+++ P +R+ + + L P P+
Sbjct: 335 FHPEHQAGPSDMELLFDIFLETVKEATAGNPGGQTVRERLTERLCPPGIPTPGSGLPPPR 394
Query: 282 KTSV 285
K +
Sbjct: 395 KVLI 398
Score = 153 (58.9 bits), Expect = 2.1e-66, Sum P(2) = 2.1e-66
Identities = 37/85 (43%), Positives = 49/85 (57%)
Query: 253 PVPPIRKTIYDTLVPKDEALIAKSFQTPKKTSVRKMREDNGIRPYNKQIDTLAAEHPAQT 312
P+PP L D+ + T + +VRK+R++ GI P KQIDT+AAE PAQT
Sbjct: 794 PLPPDLLQQAKCLGFSDKQIALAVLST--ELAVRKLRQELGICPAVKQIDTVAAEWPAQT 851
Query: 313 NYLYLTYNATAHDLAVKETVSIIKG 337
NYLYLTY T HDL + ++ G
Sbjct: 852 NYLYLTYWGTTHDLTFRTPHVLVLG 876
>UNIPROTKB|P27708 [details] [associations]
symbol:CAD "CAD protein" species:9606 "Homo sapiens"
[GO:0006543 "glutamine catabolic process" evidence=IEA] [GO:0070409
"carbamoyl phosphate biosynthetic process" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006228 "UTP
biosynthetic process" evidence=IEA] [GO:0007565 "female pregnancy"
evidence=IEA] [GO:0007595 "lactation" evidence=IEA] [GO:0009790
"embryo development" evidence=IEA] [GO:0014075 "response to amine
stimulus" evidence=IEA] [GO:0031000 "response to caffeine"
evidence=IEA] [GO:0031100 "organ regeneration" evidence=IEA]
[GO:0033574 "response to testosterone stimulus" evidence=IEA]
[GO:0035690 "cellular response to drug" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0071364 "cellular response to epidermal
growth factor stimulus" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0044205 "'de novo' UMP biosynthetic process"
evidence=IEA] [GO:0004070 "aspartate carbamoyltransferase activity"
evidence=ISS;TAS] [GO:0004088 "carbamoyl-phosphate synthase
(glutamine-hydrolyzing) activity" evidence=ISS;TAS] [GO:0004151
"dihydroorotase activity" evidence=ISS;TAS] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0006206 "pyrimidine nucleobase metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0046134 "pyrimidine nucleoside
biosynthetic process" evidence=TAS] [GO:0055086
"nucleobase-containing small molecule metabolic process"
evidence=TAS] [GO:0016363 "nuclear matrix" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0004672 "protein kinase
activity" evidence=ISS] [GO:0006541 "glutamine metabolic process"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0018107
"peptidyl-threonine phosphorylation" evidence=ISS] [GO:0046777
"protein autophosphorylation" evidence=ISS] [GO:0006207 "'de novo'
pyrimidine nucleobase biosynthetic process" evidence=ISS]
[GO:0070335 "aspartate binding" evidence=ISS] [GO:0017144 "drug
metabolic process" evidence=ISS] [GO:0042802 "identical protein
binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043195 "terminal bouton" evidence=ISS]
[GO:0042995 "cell projection" evidence=ISS] Reactome:REACT_111217
InterPro:IPR002082 InterPro:IPR002195 InterPro:IPR005479
InterPro:IPR005481 InterPro:IPR005483 InterPro:IPR006130
InterPro:IPR006131 InterPro:IPR006132 InterPro:IPR006274
InterPro:IPR006275 InterPro:IPR011059 InterPro:IPR011761
InterPro:IPR013815 InterPro:IPR013816 Pfam:PF00185 Pfam:PF00289
Pfam:PF02729 Pfam:PF02786 PRINTS:PR00098 PRINTS:PR00100
PRINTS:PR00101 PROSITE:PS00097 PROSITE:PS00482 PROSITE:PS00483
PROSITE:PS00866 PROSITE:PS00867 PROSITE:PS50975 UniPathway:UPA00070
InterPro:IPR016185 Pfam:PF00117 Pfam:PF02787 GO:GO:0005829
GO:GO:0005524 EMBL:CH471053 GO:GO:0043234 GO:GO:0046872
GO:GO:0031100 GO:GO:0043025 GO:GO:0017144 GO:GO:0007565
GO:GO:0043195 GO:GO:0031000 DrugBank:DB00130 GO:GO:0046777
DrugBank:DB00128 GO:GO:0009790 GO:GO:0004672 Gene3D:3.30.1490.20
Gene3D:3.30.470.20 Gene3D:3.40.50.20 SUPFAM:SSF52440 GO:GO:0042802
GO:GO:0018107 SUPFAM:SSF51338 GO:GO:0033574 GO:GO:0016363
GO:GO:0014075 GO:GO:0006541 CTD:790 CleanEx:HS_CAD GO:GO:0004088
GO:GO:0044205 GO:GO:0070409 GO:GO:0006543 Gene3D:3.50.30.20
InterPro:IPR002474 InterPro:IPR017926 Pfam:PF00988 SMART:SM01097
SUPFAM:SSF52021 TIGRFAMs:TIGR01368 PROSITE:PS51273 GO:GO:0006207
eggNOG:COG0458 Gene3D:1.10.1030.10 Gene3D:3.40.50.1380
InterPro:IPR005480 InterPro:IPR011607 Pfam:PF02142 SMART:SM01096
SMART:SM00851 SUPFAM:SSF48108 SUPFAM:SSF52335 TIGRFAMs:TIGR01369
HOVERGEN:HBG000279 GO:GO:0046134 SUPFAM:SSF53671 KO:K11540
GO:GO:0004070 GO:GO:0004151 TIGRFAMs:TIGR00670 HOGENOM:HOG000234584
EMBL:D78586 EMBL:BC065510 EMBL:M38561 IPI:IPI00301263 PIR:A36240
RefSeq:NP_004332.2 UniGene:Hs.377010 ProteinModelPortal:P27708
SMR:P27708 DIP:DIP-39484N IntAct:P27708 MINT:MINT-5000537
STRING:P27708 MEROPS:C26.952 PhosphoSite:P27708 DMDM:50403731
PaxDb:P27708 PeptideAtlas:P27708 PRIDE:P27708
Ensembl:ENST00000264705 GeneID:790 KEGG:hsa:790 UCSC:uc002rji.3
GeneCards:GC02P027440 HGNC:HGNC:1424 HPA:CAB007781 MIM:114010
neXtProt:NX_P27708 PharmGKB:PA26023 InParanoid:P27708
OrthoDB:EOG46WZ7G PhylomeDB:P27708
BioCyc:MetaCyc:ENSG00000084774-MONOMER BRENDA:3.5.2.3
BindingDB:P27708 ChEMBL:CHEMBL3093 ChiTaRS:cad GenomeRNAi:790
NextBio:3214 PMAP-CutDB:P27708 ArrayExpress:P27708 Bgee:P27708
Genevestigator:P27708 GermOnline:ENSG00000084774 GO:GO:0070335
Uniprot:P27708
Length = 2225
Score = 571 (206.1 bits), Expect = 2.3e-66, Sum P(2) = 2.3e-66
Identities = 108/203 (53%), Positives = 139/203 (68%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLI 63
VFQTGMVGYPEA+TDPSY QILVLTYPLIGNYG+PP + DE G+ K+FES I ++ L+
Sbjct: 28 VFQTGMVGYPEALTDPSYKAQILVLTYPLIGNYGIPPDEMDEFGLCKWFESSGIHVAALV 87
Query: 64 VGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPLA 123
VG+ C TPSHW++ TL EWL+ H IP L VDTR LTK +RE G + GK+V P
Sbjct: 88 VGECCPTPSHWSATRTLHEWLQQHGIPGLQGVDTRELTKKLREQGSLLGKLVQNGTEP-- 145
Query: 124 VTVEDLVFVDPNRGNLVDQVSTKEVVTYNPTGSVHLCVVDCGLKYNQLRCLIQRGAKLSV 183
L F+DPN LV +VS K +N G+ + +DCGLKYNQ+RCL QRGA+++V
Sbjct: 146 ---SSLPFLDPNARPLVPEVSIKTPRVFNTGGAPRILALDCGLKYNQIRCLCQRGAEVTV 202
Query: 184 IPWNHPIKVPQGWQPLFTNANDG 206
+PW+H + Q ++ LF + G
Sbjct: 203 VPWDHALD-SQEYEGLFLSNGPG 224
Score = 263 (97.6 bits), Expect = 5.6e-21, P = 5.6e-21
Identities = 55/124 (44%), Positives = 72/124 (58%)
Query: 168 YNQLRCLIQRGAKLSVIPWNHPIKV-----PQGWQPLFTNANDGTNEGIVHESLPFFSVQ 222
+NQ CL+ + + NH V P W PLFTNANDG+NEGIVH SLPFFSVQ
Sbjct: 276 HNQ-PCLLVGSGRCFLTSQNHGFAVETDSLPADWAPLFTNANDGSNEGIVHNSLPFFSVQ 334
Query: 223 FHPEHTAGPADLELLFDIFINAVRDSKTRTPV-PPIRKTIYDTLVPKDEALIAKSFQTPK 281
FHPEH AGP+D+ELLFDIF+ V+++ P +R+ + + L P P+
Sbjct: 335 FHPEHQAGPSDMELLFDIFLETVKEATAGNPGGQTVRERLTERLCPPGIPTPGSGLPPPR 394
Query: 282 KTSV 285
K +
Sbjct: 395 KVLI 398
Score = 153 (58.9 bits), Expect = 2.3e-66, Sum P(2) = 2.3e-66
Identities = 37/85 (43%), Positives = 49/85 (57%)
Query: 253 PVPPIRKTIYDTLVPKDEALIAKSFQTPKKTSVRKMREDNGIRPYNKQIDTLAAEHPAQT 312
P+PP L D+ + T + +VRK+R++ GI P KQIDT+AAE PAQT
Sbjct: 857 PLPPDLLQQAKCLGFSDKQIALAVLST--ELAVRKLRQELGICPAVKQIDTVAAEWPAQT 914
Query: 313 NYLYLTYNATAHDLAVKETVSIIKG 337
NYLYLTY T HDL + ++ G
Sbjct: 915 NYLYLTYWGTTHDLTFRTPHVLVLG 939
>RGD|2395 [details] [associations]
symbol:Cps1 "carbamoyl-phosphate synthetase 1" species:10116
"Rattus norvegicus" [GO:0000050 "urea cycle" evidence=IDA]
[GO:0001101 "response to acid" evidence=IEP] [GO:0001889 "liver
development" evidence=IEP] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004087 "carbamoyl-phosphate synthase (ammonia)
activity" evidence=ISO;IDA] [GO:0004175 "endopeptidase activity"
evidence=IMP] [GO:0005509 "calcium ion binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA;IDA] [GO:0005543 "phospholipid
binding" evidence=IDA;IPI] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0005980 "glycogen catabolic process"
evidence=IEA;ISO] [GO:0006543 "glutamine catabolic process"
evidence=IEA] [GO:0007494 "midgut development" evidence=IEP]
[GO:0008152 "metabolic process" evidence=ISO] [GO:0009636 "response
to toxic substance" evidence=IEP] [GO:0010043 "response to zinc ion"
evidence=IEP] [GO:0014075 "response to amine stimulus" evidence=IEP]
[GO:0016595 "glutamate binding" evidence=IPI] [GO:0019433
"triglyceride catabolic process" evidence=IEA;ISO] [GO:0032094
"response to food" evidence=IEP] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0032496 "response to lipopolysaccharide"
evidence=IEP;ISO] [GO:0033762 "response to glucagon stimulus"
evidence=IEP] [GO:0034201 "response to oleic acid" evidence=IEP]
[GO:0042493 "response to drug" evidence=IEP] [GO:0042594 "response to
starvation" evidence=IEP] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA;ISO] [GO:0043200 "response to amino acid stimulus"
evidence=IEP] [GO:0043234 "protein complex" evidence=IDA] [GO:0044344
"cellular response to fibroblast growth factor stimulus"
evidence=IEP] [GO:0045909 "positive regulation of vasodilation"
evidence=IEA;ISO] [GO:0046209 "nitric oxide metabolic process"
evidence=IEA;ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048545 "response to steroid hormone stimulus" evidence=IEP]
[GO:0050667 "homocysteine metabolic process" evidence=IEA;ISO]
[GO:0051384 "response to glucocorticoid stimulus" evidence=IEP]
[GO:0051591 "response to cAMP" evidence=IEP] [GO:0055081 "anion
homeostasis" evidence=IDA] [GO:0060416 "response to growth hormone
stimulus" evidence=IEP] [GO:0070365 "hepatocyte differentiation"
evidence=IEP] [GO:0070409 "carbamoyl phosphate biosynthetic process"
evidence=IEA;ISO] [GO:0071320 "cellular response to cAMP"
evidence=IEP] [GO:0071377 "cellular response to glucagon stimulus"
evidence=IEP] [GO:0071400 "cellular response to oleic acid"
evidence=IEP] [GO:0071548 "response to dexamethasone stimulus"
evidence=IEP] [GO:0072341 "modified amino acid binding"
evidence=IEA;ISO] InterPro:IPR005479 InterPro:IPR005481
InterPro:IPR005483 InterPro:IPR006274 InterPro:IPR006275
InterPro:IPR011761 InterPro:IPR013815 InterPro:IPR013816 Pfam:PF00289
Pfam:PF02786 PRINTS:PR00098 PROSITE:PS00866 PROSITE:PS00867
PROSITE:PS50975 InterPro:IPR016185 Pfam:PF00117 Pfam:PF02787 RGD:2395
GO:GO:0005524 GO:GO:0043234 GO:GO:0005730 GO:GO:0032403 GO:GO:0005743
GO:GO:0071320 GO:GO:0044344 GO:GO:0042493 GO:GO:0005543 GO:GO:0010043
GO:GO:0032496 GO:GO:0005509 GO:GO:0045909 GO:GO:0042594 GO:GO:0007494
GO:GO:0019433 GO:GO:0055081 GO:GO:0071400 Gene3D:3.30.1490.20
Gene3D:3.30.470.20 Gene3D:3.40.50.20 SUPFAM:SSF52440 GO:GO:0042645
GO:GO:0004175 GO:GO:0032094 GO:GO:0071377 GO:GO:0005980 GO:GO:0043200
GO:GO:0070365 GO:GO:0000050 GO:GO:0014075 GO:GO:0060416 GO:GO:0071548
GO:GO:0046209 GO:GO:0070409 GO:GO:0006543 Gene3D:3.50.30.20
InterPro:IPR002474 InterPro:IPR017926 Pfam:PF00988 SMART:SM01097
SUPFAM:SSF52021 TIGRFAMs:TIGR01368 PROSITE:PS51273 eggNOG:COG0458
HOGENOM:HOG000234583 Gene3D:1.10.1030.10 Gene3D:3.40.50.1380
InterPro:IPR005480 InterPro:IPR011607 Pfam:PF02142 SMART:SM01096
SMART:SM00851 SUPFAM:SSF48108 SUPFAM:SSF52335 TIGRFAMs:TIGR01369
GO:GO:0004087 GO:GO:0072341 GO:GO:0050667 MEROPS:C26.951 CTD:1373
HOVERGEN:HBG000279 KO:K01948 OrthoDB:EOG45MN4G GO:GO:0016595
EMBL:M12335 EMBL:M11710 EMBL:M12318 EMBL:M12319 EMBL:M12320
EMBL:M12321 EMBL:M12322 EMBL:M12323 EMBL:M12324 EMBL:M12325
EMBL:M12326 EMBL:M12327 EMBL:M12328 EMBL:J02805 IPI:IPI00210644
PIR:A28481 RefSeq:NP_058768.1 UniGene:Rn.53968
ProteinModelPortal:P07756 SMR:P07756 STRING:P07756 PhosphoSite:P07756
PRIDE:P07756 GeneID:497840 KEGG:rno:497840 UCSC:RGD:2395
InParanoid:P07756 SABIO-RK:P07756 NextBio:697797 ArrayExpress:P07756
Genevestigator:P07756 GermOnline:ENSRNOG00000013704 Uniprot:P07756
Length = 1500
Score = 398 (145.2 bits), Expect = 1.1e-65, Sum P(3) = 1.1e-65
Identities = 80/186 (43%), Positives = 116/186 (62%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQD-KDEHGILKYFESHRIWISGL 62
VF TG+ GY EA+TDP+Y QIL + P+IGN G P +DE G+ KY ES I ++GL
Sbjct: 72 VFNTGLGGYSEALTDPAYKGQILTMANPIIGNGGAPDTTARDELGLNKYMESDGIKVAGL 131
Query: 63 IVGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPL 122
+V + +HW + +LG+WL+ +PA+ VDTR LTK IR+ G + GKI
Sbjct: 132 LVLNYSHDYNHWLATKSLGQWLQEEKVPAIYGVDTRMLTKIIRDKGTMLGKIEFEG---- 187
Query: 123 AVTVEDLVFVDPNRGNLVDQVSTKEVVTYNPTGSVHLCVVDCGLKYNQLRCLIQRGAKLS 182
+ + FVDPN+ NL+ +VSTK+V + + VDCG+K N +R L++RGA++
Sbjct: 188 ----QSVDFVDPNKQNLIAEVSTKDVKVFGKGNPTKVVAVDCGIKNNVIRLLVKRGAEVH 243
Query: 183 VIPWNH 188
++PWNH
Sbjct: 244 LVPWNH 249
Score = 207 (77.9 bits), Expect = 1.1e-65, Sum P(3) = 1.1e-65
Identities = 43/87 (49%), Positives = 55/87 (63%)
Query: 192 VPQGWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRDSK-- 249
+P GW+PLF N ND TNEGI+HES PFF+VQFHPE + GP D E LFD F + ++ K
Sbjct: 345 LPAGWKPLFVNVNDQTNEGIMHESKPFFAVQFHPEVSPGPTDTEYLFDSFFSLIKKGKGT 404
Query: 250 TRTPVPPIRKTIYDTLVPKDEALIAKS 276
T T V P + + + V + LI S
Sbjct: 405 TITSVLP-KPALVASRVEVSKVLILGS 430
Score = 135 (52.6 bits), Expect = 1.1e-65, Sum P(3) = 1.1e-65
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 282 KTSVRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDLAVKETVSIIKG 337
+ R++R I P+ KQIDTLAAE+P+ TNYLY+TYN HD+ E ++ G
Sbjct: 925 EAQTRELRLKKNIHPWVKQIDTLAAEYPSVTNYLYVTYNGQEHDIKFDEHGIMVLG 980
Score = 37 (18.1 bits), Expect = 2.0e-55, Sum P(3) = 2.0e-55
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 278 QTPKKTSVRKMREDNGI 294
Q P +S+RK+ D I
Sbjct: 1416 QNPSLSSIRKLIRDGSI 1432
>UNIPROTKB|P07756 [details] [associations]
symbol:Cps1 "Carbamoyl-phosphate synthase [ammonia],
mitochondrial" species:10116 "Rattus norvegicus" [GO:0006543
"glutamine catabolic process" evidence=IEA] [GO:0070409 "carbamoyl
phosphate biosynthetic process" evidence=IEA] InterPro:IPR005479
InterPro:IPR005481 InterPro:IPR005483 InterPro:IPR006274
InterPro:IPR006275 InterPro:IPR011761 InterPro:IPR013815
InterPro:IPR013816 Pfam:PF00289 Pfam:PF02786 PRINTS:PR00098
PROSITE:PS00866 PROSITE:PS00867 PROSITE:PS50975 InterPro:IPR016185
Pfam:PF00117 Pfam:PF02787 RGD:2395 GO:GO:0005524 GO:GO:0043234
GO:GO:0005730 GO:GO:0032403 GO:GO:0005743 GO:GO:0071320
GO:GO:0044344 GO:GO:0042493 GO:GO:0005543 GO:GO:0010043
GO:GO:0032496 GO:GO:0005509 GO:GO:0045909 GO:GO:0042594
GO:GO:0007494 GO:GO:0019433 GO:GO:0055081 GO:GO:0071400
Gene3D:3.30.1490.20 Gene3D:3.30.470.20 Gene3D:3.40.50.20
SUPFAM:SSF52440 GO:GO:0042645 GO:GO:0004175 GO:GO:0032094
GO:GO:0071377 GO:GO:0005980 GO:GO:0043200 GO:GO:0070365
GO:GO:0000050 GO:GO:0014075 GO:GO:0060416 GO:GO:0071548
GO:GO:0046209 GO:GO:0070409 GO:GO:0006543 Gene3D:3.50.30.20
InterPro:IPR002474 InterPro:IPR017926 Pfam:PF00988 SMART:SM01097
SUPFAM:SSF52021 TIGRFAMs:TIGR01368 PROSITE:PS51273 eggNOG:COG0458
HOGENOM:HOG000234583 Gene3D:1.10.1030.10 Gene3D:3.40.50.1380
InterPro:IPR005480 InterPro:IPR011607 Pfam:PF02142 SMART:SM01096
SMART:SM00851 SUPFAM:SSF48108 SUPFAM:SSF52335 TIGRFAMs:TIGR01369
GO:GO:0004087 GO:GO:0072341 GO:GO:0050667 MEROPS:C26.951 CTD:1373
HOVERGEN:HBG000279 KO:K01948 OrthoDB:EOG45MN4G GO:GO:0016595
EMBL:M12335 EMBL:M11710 EMBL:M12318 EMBL:M12319 EMBL:M12320
EMBL:M12321 EMBL:M12322 EMBL:M12323 EMBL:M12324 EMBL:M12325
EMBL:M12326 EMBL:M12327 EMBL:M12328 EMBL:J02805 IPI:IPI00210644
PIR:A28481 RefSeq:NP_058768.1 UniGene:Rn.53968
ProteinModelPortal:P07756 SMR:P07756 STRING:P07756
PhosphoSite:P07756 PRIDE:P07756 GeneID:497840 KEGG:rno:497840
UCSC:RGD:2395 InParanoid:P07756 SABIO-RK:P07756 NextBio:697797
ArrayExpress:P07756 Genevestigator:P07756
GermOnline:ENSRNOG00000013704 Uniprot:P07756
Length = 1500
Score = 398 (145.2 bits), Expect = 1.1e-65, Sum P(3) = 1.1e-65
Identities = 80/186 (43%), Positives = 116/186 (62%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQD-KDEHGILKYFESHRIWISGL 62
VF TG+ GY EA+TDP+Y QIL + P+IGN G P +DE G+ KY ES I ++GL
Sbjct: 72 VFNTGLGGYSEALTDPAYKGQILTMANPIIGNGGAPDTTARDELGLNKYMESDGIKVAGL 131
Query: 63 IVGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPL 122
+V + +HW + +LG+WL+ +PA+ VDTR LTK IR+ G + GKI
Sbjct: 132 LVLNYSHDYNHWLATKSLGQWLQEEKVPAIYGVDTRMLTKIIRDKGTMLGKIEFEG---- 187
Query: 123 AVTVEDLVFVDPNRGNLVDQVSTKEVVTYNPTGSVHLCVVDCGLKYNQLRCLIQRGAKLS 182
+ + FVDPN+ NL+ +VSTK+V + + VDCG+K N +R L++RGA++
Sbjct: 188 ----QSVDFVDPNKQNLIAEVSTKDVKVFGKGNPTKVVAVDCGIKNNVIRLLVKRGAEVH 243
Query: 183 VIPWNH 188
++PWNH
Sbjct: 244 LVPWNH 249
Score = 207 (77.9 bits), Expect = 1.1e-65, Sum P(3) = 1.1e-65
Identities = 43/87 (49%), Positives = 55/87 (63%)
Query: 192 VPQGWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRDSK-- 249
+P GW+PLF N ND TNEGI+HES PFF+VQFHPE + GP D E LFD F + ++ K
Sbjct: 345 LPAGWKPLFVNVNDQTNEGIMHESKPFFAVQFHPEVSPGPTDTEYLFDSFFSLIKKGKGT 404
Query: 250 TRTPVPPIRKTIYDTLVPKDEALIAKS 276
T T V P + + + V + LI S
Sbjct: 405 TITSVLP-KPALVASRVEVSKVLILGS 430
Score = 135 (52.6 bits), Expect = 1.1e-65, Sum P(3) = 1.1e-65
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 282 KTSVRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDLAVKETVSIIKG 337
+ R++R I P+ KQIDTLAAE+P+ TNYLY+TYN HD+ E ++ G
Sbjct: 925 EAQTRELRLKKNIHPWVKQIDTLAAEYPSVTNYLYVTYNGQEHDIKFDEHGIMVLG 980
Score = 37 (18.1 bits), Expect = 2.0e-55, Sum P(3) = 2.0e-55
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 278 QTPKKTSVRKMREDNGI 294
Q P +S+RK+ D I
Sbjct: 1416 QNPSLSSIRKLIRDGSI 1432
>UNIPROTKB|P08955 [details] [associations]
symbol:CAD "CAD protein" species:10036 "Mesocricetus
auratus" [GO:0002134 "UTP binding" evidence=IDA] [GO:0004070
"aspartate carbamoyltransferase activity" evidence=IDA] [GO:0004088
"carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity"
evidence=IDA] [GO:0004151 "dihydroorotase activity" evidence=IDA]
[GO:0004672 "protein kinase activity" evidence=IDA] [GO:0005524
"ATP binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006207 "'de
novo' pyrimidine nucleobase biosynthetic process" evidence=IC;IDA]
[GO:0006541 "glutamine metabolic process" evidence=IDA] [GO:0016363
"nuclear matrix" evidence=IDA] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0046777 "protein
autophosphorylation" evidence=IDA] [GO:0070335 "aspartate binding"
evidence=IDA] InterPro:IPR002082 InterPro:IPR002195
InterPro:IPR005479 InterPro:IPR005481 InterPro:IPR005483
InterPro:IPR006130 InterPro:IPR006131 InterPro:IPR006132
InterPro:IPR006274 InterPro:IPR006275 InterPro:IPR011059
InterPro:IPR011761 InterPro:IPR013815 InterPro:IPR013816
Pfam:PF00185 Pfam:PF00289 Pfam:PF02729 Pfam:PF02786 PRINTS:PR00098
PRINTS:PR00100 PRINTS:PR00101 PROSITE:PS00097 PROSITE:PS00482
PROSITE:PS00483 PROSITE:PS00866 PROSITE:PS00867 PROSITE:PS50975
UniPathway:UPA00070 InterPro:IPR016185 Pfam:PF00117 Pfam:PF02787
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 GO:GO:0046872
GO:GO:0046777 GO:GO:0004672 Gene3D:3.30.1490.20 Gene3D:3.30.470.20
Gene3D:3.40.50.20 SUPFAM:SSF52440 GO:GO:0018107 SUPFAM:SSF51338
GO:GO:0016363 GO:GO:0006541 GO:GO:0004088 GO:GO:0044205
GO:GO:0070409 GO:GO:0006543 Gene3D:3.50.30.20 InterPro:IPR002474
InterPro:IPR017926 Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021
TIGRFAMs:TIGR01368 PROSITE:PS51273 GO:GO:0006207
Gene3D:1.10.1030.10 Gene3D:3.40.50.1380 InterPro:IPR005480
InterPro:IPR011607 Pfam:PF02142 SMART:SM01096 SMART:SM00851
SUPFAM:SSF48108 SUPFAM:SSF52335 TIGRFAMs:TIGR01369
HOVERGEN:HBG000279 GO:GO:0002134 SUPFAM:SSF53671 GO:GO:0004070
GO:GO:0004151 TIGRFAMs:TIGR00670 MEROPS:M38.972 BRENDA:3.5.2.3
GO:GO:0070335 EMBL:J05503 EMBL:M28866 EMBL:M60078 EMBL:M11242
EMBL:M23652 EMBL:M21927 PIR:A38653 ProteinModelPortal:P08955
PRIDE:P08955 SABIO-RK:P08955 Uniprot:P08955
Length = 2225
Score = 569 (205.4 bits), Expect = 2.6e-65, Sum P(2) = 2.6e-65
Identities = 108/203 (53%), Positives = 137/203 (67%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLI 63
VFQTGMVGYPEA+TDPSY QILVLTYPLIGNYG+P ++DE G+ K+FES ++GL+
Sbjct: 28 VFQTGMVGYPEALTDPSYKAQILVLTYPLIGNYGIPSDEEDEFGLSKWFESSENHVAGLV 87
Query: 64 VGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPLA 123
VG+ C TPSHW++ TL EWL+ H IP L VDTR LTK +RE G + GK+V P
Sbjct: 88 VGECCPTPSHWSATCTLHEWLQQHGIPGLQGVDTRELTKKLREQGSLLGKLVQSGTEP-- 145
Query: 124 VTVEDLVFVDPNRGNLVDQVSTKEVVTYNPTGSVHLCVVDCGLKYNQLRCLIQRGAKLSV 183
L FVDPN L +VS K +N G+ +C +DCGLKYNQ+RCL Q GA+++V
Sbjct: 146 ---STLPFVDPNARPLAPEVSIKTPRVFNAGGAPRICALDCGLKYNQIRCLCQLGAEVTV 202
Query: 184 IPWNHPIKVPQGWQPLFTNANDG 206
+PWNH + Q + LF + G
Sbjct: 203 VPWNHELD-SQKYDGLFLSNGPG 224
Score = 261 (96.9 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 54/124 (43%), Positives = 73/124 (58%)
Query: 168 YNQLRCLIQRGAKLSVIPWNHPIKV-----PQGWQPLFTNANDGTNEGIVHESLPFFSVQ 222
+NQ CL+ + + NH V P GW PLFTNAND +NEGIVH+SLPFFSVQ
Sbjct: 276 HNQ-PCLLVGTGRCFLTSQNHGFAVDADSLPAGWTPLFTNANDCSNEGIVHDSLPFFSVQ 334
Query: 223 FHPEHTAGPADLELLFDIFINAVRDSKTRTPV-PPIRKTIYDTLVPKDEALIAKSFQTPK 281
FHPEH AGP+D+ELLFD+F+ VR++ P +++ + L P + P+
Sbjct: 335 FHPEHRAGPSDMELLFDVFLETVREAVAGNPGGQTVKERLVQRLCPPGLLIPGSGLPPPR 394
Query: 282 KTSV 285
K +
Sbjct: 395 KVLI 398
Score = 145 (56.1 bits), Expect = 2.6e-65, Sum P(2) = 2.6e-65
Identities = 30/54 (55%), Positives = 38/54 (70%)
Query: 284 SVRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDLAVKETVSIIKG 337
+VRK+R++ GI P KQIDT+AAE PAQTNYLYLTY HDL + ++ G
Sbjct: 886 AVRKLRQELGICPAVKQIDTVAAEWPAQTNYLYLTYWGNTHDLDFRTPHVLVLG 939
>UNIPROTKB|E2RAV2 [details] [associations]
symbol:CAD "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070409 "carbamoyl phosphate biosynthetic
process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016812 "hydrolase activity, acting on
carbon-nitrogen (but not peptide) bonds, in cyclic amides"
evidence=IEA] [GO:0016597 "amino acid binding" evidence=IEA]
[GO:0006543 "glutamine catabolic process" evidence=IEA] [GO:0006207
"'de novo' pyrimidine nucleobase biosynthetic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004070
"aspartate carbamoyltransferase activity" evidence=IEA]
HAMAP:MF_00001 HAMAP:MF_01209 InterPro:IPR002082 InterPro:IPR002195
InterPro:IPR005479 InterPro:IPR005481 InterPro:IPR005483
InterPro:IPR006130 InterPro:IPR006131 InterPro:IPR006132
InterPro:IPR006274 InterPro:IPR006275 InterPro:IPR011059
InterPro:IPR011761 InterPro:IPR013815 InterPro:IPR013816
Pfam:PF00185 Pfam:PF00289 Pfam:PF02729 Pfam:PF02786 PRINTS:PR00098
PRINTS:PR00100 PRINTS:PR00101 PROSITE:PS00097 PROSITE:PS00482
PROSITE:PS00483 PROSITE:PS00866 PROSITE:PS00867 PROSITE:PS50975
InterPro:IPR016185 Pfam:PF00117 Pfam:PF02787 GO:GO:0005524
GO:GO:0046872 GO:GO:0016597 Gene3D:3.30.1490.20 Gene3D:3.30.470.20
Gene3D:3.40.50.20 SUPFAM:SSF52440 SUPFAM:SSF51338 GO:GO:0070409
GO:GO:0006543 Gene3D:3.50.30.20 InterPro:IPR002474
InterPro:IPR017926 Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021
TIGRFAMs:TIGR01368 PROSITE:PS51273 GO:GO:0006207
Gene3D:1.10.1030.10 Gene3D:3.40.50.1380 InterPro:IPR005480
InterPro:IPR011607 Pfam:PF02142 SMART:SM01096 SMART:SM00851
SUPFAM:SSF48108 SUPFAM:SSF52335 TIGRFAMs:TIGR01369
GeneTree:ENSGT00390000015604 GO:GO:0016812 SUPFAM:SSF53671
OMA:QRPVHIC GO:GO:0004070 TIGRFAMs:TIGR00670 EMBL:AAEX03010804
Ensembl:ENSCAFT00000007712 Uniprot:E2RAV2
Length = 2228
Score = 562 (202.9 bits), Expect = 2.6e-65, Sum P(2) = 2.6e-65
Identities = 107/203 (52%), Positives = 140/203 (68%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLI 63
VFQTGMVGYPEA+TDPSY QILVLTYPLIGNYG+P + DE G+ K+FES I ++GL+
Sbjct: 28 VFQTGMVGYPEALTDPSYKAQILVLTYPLIGNYGIPTDEVDEFGLSKWFESSGIHVAGLV 87
Query: 64 VGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPLA 123
VG+ C TPSHW++ TL +WL+ H IP L VDTR LTK +RE G + GK+V P A
Sbjct: 88 VGECCPTPSHWSATRTLHQWLQQHGIPGLQGVDTRELTKKLREQGSLLGKLVQDGTEPSA 147
Query: 124 VTVEDLVFVDPNRGNLVDQVSTKEVVTYNPTGSVHLCVVDCGLKYNQLRCLIQRGAKLSV 183
L F+DPN LV +VS K +N G+ + +DCGLKYNQ+RCL QRGA+++V
Sbjct: 148 -----LPFLDPNARPLVPEVSIKAPRVFNAGGTPRILALDCGLKYNQIRCLCQRGAEVTV 202
Query: 184 IPWNHPIKVPQGWQPLFTNANDG 206
+PW+H + Q ++ +F + G
Sbjct: 203 VPWDHTLD-SQEYEGVFLSNGPG 224
Score = 260 (96.6 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 56/118 (47%), Positives = 71/118 (60%)
Query: 168 YNQLRCLIQRGAKLSVIPWNHPIKV-----PQGWQPLFTNANDGTNEGIVHESLPFFSVQ 222
+NQ CL+ + + NH V P GW PLFTNAND +NEGIVH+SLPFFSVQ
Sbjct: 276 HNQ-PCLLVGSGRCFLTSQNHGFAVETDSLPAGWLPLFTNANDRSNEGIVHDSLPFFSVQ 334
Query: 223 FHPEHTAGPADLELLFDIFINAVRDSKTRTPVPPIRKTIYDTLVPKDEALIAKSFQTP 280
FHPEH AGP+D+ELLFDIF+ V+++ P T+ + L+ E L TP
Sbjct: 335 FHPEHQAGPSDMELLFDIFLETVKEATAGNPGGWTGSTVRERLI---ERLCPPGIPTP 389
Score = 152 (58.6 bits), Expect = 2.6e-65, Sum P(2) = 2.6e-65
Identities = 31/54 (57%), Positives = 39/54 (72%)
Query: 284 SVRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDLAVKETVSIIKG 337
+VRK+R++ GI P KQIDT+AAE PAQTNYLYLTY T HDL + ++ G
Sbjct: 889 AVRKLRQELGICPAVKQIDTVAAEWPAQTNYLYLTYWGTTHDLTFRTPHVLVLG 942
>UNIPROTKB|F1N9N8 [details] [associations]
symbol:CPS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003824 "catalytic activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006543 "glutamine catabolic
process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070409 "carbamoyl phosphate biosynthetic
process" evidence=IEA] InterPro:IPR005479 InterPro:IPR005481
InterPro:IPR005483 InterPro:IPR006274 InterPro:IPR006275
InterPro:IPR011761 InterPro:IPR013815 InterPro:IPR013816
Pfam:PF00289 Pfam:PF02786 PRINTS:PR00098 PROSITE:PS00866
PROSITE:PS00867 PROSITE:PS50975 InterPro:IPR016185 Pfam:PF00117
Pfam:PF02787 GO:GO:0005524 GO:GO:0003824 GO:GO:0046872
Gene3D:3.30.1490.20 Gene3D:3.30.470.20 Gene3D:3.40.50.20
SUPFAM:SSF52440 GO:GO:0070409 GO:GO:0006543 Gene3D:3.50.30.20
InterPro:IPR002474 InterPro:IPR017926 Pfam:PF00988 SMART:SM01097
SUPFAM:SSF52021 TIGRFAMs:TIGR01368 PROSITE:PS51273
Gene3D:1.10.1030.10 Gene3D:3.40.50.1380 InterPro:IPR005480
InterPro:IPR011607 Pfam:PF02142 SMART:SM01096 SMART:SM00851
SUPFAM:SSF48108 SUPFAM:SSF52335 TIGRFAMs:TIGR01369
GeneTree:ENSGT00390000015604 EMBL:AADN02034519 EMBL:AADN02034517
EMBL:AADN02034518 IPI:IPI00583887 Ensembl:ENSGALT00000004656
Uniprot:F1N9N8
Length = 1446
Score = 416 (151.5 bits), Expect = 3.7e-65, Sum P(3) = 3.7e-65
Identities = 87/186 (46%), Positives = 117/186 (62%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDK-DEHGILKYFESHRIWISGL 62
VF TG+ GY EA+TDPSY QIL L P++GN GVP DE G+ ++ ES I +SGL
Sbjct: 17 VFNTGISGYTEALTDPSYKGQILTLANPVVGNGGVPDTAALDEIGLRRFLESDGIKVSGL 76
Query: 63 IVGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPL 122
+V D + SHW +A +LGEWL+ +PAL VDTR L+K IR+ G V GKI
Sbjct: 77 LVLDYSNEYSHWQAARSLGEWLQEEKVPALYGVDTRMLSKLIRDKGTVLGKIEFEG---- 132
Query: 123 AVTVEDLVFVDPNRGNLVDQVSTKEVVTYNPTGSVHLCVVDCGLKYNQLRCLIQRGAKLS 182
+ F DPN+ NL+ +VSTKEV Y V + VDCGLK N +R L+++GA++
Sbjct: 133 ----QPTEFADPNKQNLIAEVSTKEVKVYGKGNPVKVVAVDCGLKNNVIRLLVKQGAEVH 188
Query: 183 VIPWNH 188
++PW+H
Sbjct: 189 LVPWDH 194
Score = 192 (72.6 bits), Expect = 3.7e-65, Sum P(3) = 3.7e-65
Identities = 34/61 (55%), Positives = 43/61 (70%)
Query: 192 VPQGWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRDSKTR 251
+P GW+PLF NAND TNEGI+HE+ P F+ QF+P+ GP D E LFD FI+ V+ K
Sbjct: 291 LPPGWRPLFVNANDQTNEGIMHETRPIFTAQFYPDANPGPTDTEFLFDSFISLVKRGKGT 350
Query: 252 T 252
T
Sbjct: 351 T 351
Score = 126 (49.4 bits), Expect = 3.7e-65, Sum P(3) = 3.7e-65
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 286 RKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDLAVKETVSIIKG 337
R++R + P+ K+IDTLAAE+PA TNYLY+TYN HD+ + ++ G
Sbjct: 875 RQLRLRKNVVPWVKKIDTLAAEYPAVTNYLYVTYNGQEHDIKFDDCGVMVLG 926
>UNIPROTKB|F1N9P0 [details] [associations]
symbol:CPS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006543
"glutamine catabolic process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0070409 "carbamoyl phosphate
biosynthetic process" evidence=IEA] [GO:0004087
"carbamoyl-phosphate synthase (ammonia) activity" evidence=IEA]
[GO:0005980 "glycogen catabolic process" evidence=IEA] [GO:0019433
"triglyceride catabolic process" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] [GO:0045909 "positive
regulation of vasodilation" evidence=IEA] [GO:0046209 "nitric oxide
metabolic process" evidence=IEA] [GO:0050667 "homocysteine
metabolic process" evidence=IEA] [GO:0072341 "modified amino acid
binding" evidence=IEA] HAMAP:MF_01209 InterPro:IPR005479
InterPro:IPR005481 InterPro:IPR005483 InterPro:IPR006274
InterPro:IPR006275 InterPro:IPR011761 InterPro:IPR013815
InterPro:IPR013816 Pfam:PF00289 Pfam:PF02786 PRINTS:PR00098
PROSITE:PS00866 PROSITE:PS00867 PROSITE:PS50975 InterPro:IPR016185
Pfam:PF00117 Pfam:PF02787 GO:GO:0005524 GO:GO:0046872 GO:GO:0045909
GO:GO:0019433 Gene3D:3.30.1490.20 Gene3D:3.30.470.20
Gene3D:3.40.50.20 SUPFAM:SSF52440 GO:GO:0042645 GO:GO:0005980
GO:GO:0046209 GO:GO:0070409 GO:GO:0006543 Gene3D:3.50.30.20
InterPro:IPR002474 InterPro:IPR017926 Pfam:PF00988 SMART:SM01097
SUPFAM:SSF52021 TIGRFAMs:TIGR01368 PROSITE:PS51273
Gene3D:1.10.1030.10 Gene3D:3.40.50.1380 InterPro:IPR005480
InterPro:IPR011607 Pfam:PF02142 SMART:SM01096 SMART:SM00851
SUPFAM:SSF48108 SUPFAM:SSF52335 TIGRFAMs:TIGR01369 GO:GO:0004087
GeneTree:ENSGT00390000015604 GO:GO:0072341 GO:GO:0050667
EMBL:AADN02034519 EMBL:AADN02034517 EMBL:AADN02034518
IPI:IPI00577482 Ensembl:ENSGALT00000004655 OMA:IQANDER
Uniprot:F1N9P0
Length = 1510
Score = 416 (151.5 bits), Expect = 4.5e-65, Sum P(3) = 4.5e-65
Identities = 87/186 (46%), Positives = 117/186 (62%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDK-DEHGILKYFESHRIWISGL 62
VF TG+ GY EA+TDPSY QIL L P++GN GVP DE G+ ++ ES I +SGL
Sbjct: 80 VFNTGISGYTEALTDPSYKGQILTLANPVVGNGGVPDTAALDEIGLRRFLESDGIKVSGL 139
Query: 63 IVGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPL 122
+V D + SHW +A +LGEWL+ +PAL VDTR L+K IR+ G V GKI
Sbjct: 140 LVLDYSNEYSHWQAARSLGEWLQEEKVPALYGVDTRMLSKLIRDKGTVLGKIEFEG---- 195
Query: 123 AVTVEDLVFVDPNRGNLVDQVSTKEVVTYNPTGSVHLCVVDCGLKYNQLRCLIQRGAKLS 182
+ F DPN+ NL+ +VSTKEV Y V + VDCGLK N +R L+++GA++
Sbjct: 196 ----QPTEFADPNKQNLIAEVSTKEVKVYGKGNPVKVVAVDCGLKNNVIRLLVKQGAEVH 251
Query: 183 VIPWNH 188
++PW+H
Sbjct: 252 LVPWDH 257
Score = 192 (72.6 bits), Expect = 4.5e-65, Sum P(3) = 4.5e-65
Identities = 34/61 (55%), Positives = 43/61 (70%)
Query: 192 VPQGWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRDSKTR 251
+P GW+PLF NAND TNEGI+HE+ P F+ QF+P+ GP D E LFD FI+ V+ K
Sbjct: 354 LPPGWRPLFVNANDQTNEGIMHETRPIFTAQFYPDANPGPTDTEFLFDSFISLVKRGKGT 413
Query: 252 T 252
T
Sbjct: 414 T 414
Score = 126 (49.4 bits), Expect = 4.5e-65, Sum P(3) = 4.5e-65
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 286 RKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDLAVKETVSIIKG 337
R++R + P+ K+IDTLAAE+PA TNYLY+TYN HD+ + ++ G
Sbjct: 938 RQLRLRKNVVPWVKKIDTLAAEYPAVTNYLYVTYNGQEHDIKFDDCGVMVLG 989
>RGD|1588606 [details] [associations]
symbol:Cad "carbamoyl-phosphate synthetase 2, aspartate
transcarbamylase, and dihydroorotase" species:10116 "Rattus
norvegicus" [GO:0004070 "aspartate carbamoyltransferase activity"
evidence=IDA] [GO:0004088 "carbamoyl-phosphate synthase
(glutamine-hydrolyzing) activity" evidence=IDA] [GO:0004151
"dihydroorotase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005829
"cytosol" evidence=IEA;ISO] [GO:0006207 "'de novo' pyrimidine
nucleobase biosynthetic process" evidence=IDA] [GO:0006228 "UTP
biosynthetic process" evidence=IDA] [GO:0006541 "glutamine
metabolic process" evidence=IEP] [GO:0006543 "glutamine catabolic
process" evidence=IEA] [GO:0007565 "female pregnancy" evidence=IEP]
[GO:0007595 "lactation" evidence=IEP] [GO:0009790 "embryo
development" evidence=IEP] [GO:0014075 "response to amine stimulus"
evidence=IEP] [GO:0016363 "nuclear matrix" evidence=IEA;ISO]
[GO:0016597 "amino acid binding" evidence=IEA] [GO:0017144 "drug
metabolic process" evidence=IMP] [GO:0019899 "enzyme binding"
evidence=IEA;ISO] [GO:0031000 "response to caffeine" evidence=IEP]
[GO:0031100 "organ regeneration" evidence=IEP] [GO:0033574
"response to testosterone stimulus" evidence=IEP] [GO:0035690
"cellular response to drug" evidence=IEP] [GO:0042802 "identical
protein binding" evidence=IDA] [GO:0042995 "cell projection"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043234 "protein
complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051414 "response to cortisol stimulus"
evidence=IEP] [GO:0070409 "carbamoyl phosphate biosynthetic
process" evidence=IEA] [GO:0071364 "cellular response to epidermal
growth factor stimulus" evidence=IEP] HAMAP:MF_00001 HAMAP:MF_01209
InterPro:IPR002082 InterPro:IPR002195 InterPro:IPR005479
InterPro:IPR005481 InterPro:IPR005483 InterPro:IPR006130
InterPro:IPR006131 InterPro:IPR006132 InterPro:IPR006274
InterPro:IPR006275 InterPro:IPR011059 InterPro:IPR011761
InterPro:IPR013815 InterPro:IPR013816 Pfam:PF00185 Pfam:PF00289
Pfam:PF02729 Pfam:PF02786 PRINTS:PR00098 PRINTS:PR00100
PRINTS:PR00101 PROSITE:PS00097 PROSITE:PS00482 PROSITE:PS00483
PROSITE:PS00866 PROSITE:PS00867 PROSITE:PS50975 InterPro:IPR016185
Pfam:PF00117 Pfam:PF02787 RGD:1588606 GO:GO:0005829 GO:GO:0005524
GO:GO:0043234 GO:GO:0046872 GO:GO:0031100 GO:GO:0043025
GO:GO:0017144 GO:GO:0007565 GO:GO:0043195 GO:GO:0031000
GO:GO:0016597 GO:GO:0009790 Gene3D:3.30.1490.20 Gene3D:3.30.470.20
Gene3D:3.40.50.20 SUPFAM:SSF52440 GO:GO:0042802 GO:GO:0035690
SUPFAM:SSF51338 GO:GO:0033574 GO:GO:0016363 GO:GO:0071364
GO:GO:0007595 GO:GO:0014075 GO:GO:0006541 CTD:790 GO:GO:0004088
GO:GO:0070409 GO:GO:0006543 Gene3D:3.50.30.20 InterPro:IPR002474
InterPro:IPR017926 Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021
TIGRFAMs:TIGR01368 PROSITE:PS51273 GO:GO:0006207
Gene3D:1.10.1030.10 Gene3D:3.40.50.1380 InterPro:IPR005480
InterPro:IPR011607 Pfam:PF02142 SMART:SM01096 SMART:SM00851
SUPFAM:SSF48108 SUPFAM:SSF52335 TIGRFAMs:TIGR01369
GeneTree:ENSGT00390000015604 GO:GO:0051414 GO:GO:0006228
SUPFAM:SSF53671 KO:K11540 OMA:QRPVHIC GO:GO:0004070 GO:GO:0004151
TIGRFAMs:TIGR00670 OrthoDB:EOG46WZ7G IPI:IPI00365582
RefSeq:NP_001099180.2 ProteinModelPortal:D4A8A0 PRIDE:D4A8A0
Ensembl:ENSRNOT00000039709 GeneID:24240 KEGG:rno:24240
Uniprot:D4A8A0
Length = 2225
Score = 565 (203.9 bits), Expect = 8.7e-65, Sum P(2) = 8.7e-65
Identities = 109/203 (53%), Positives = 138/203 (67%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLI 63
VFQTGMVGYPEA+TDPSY QILVLTYPLIGNYG+P ++DE G+ K+FES I ++GL+
Sbjct: 28 VFQTGMVGYPEALTDPSYKAQILVLTYPLIGNYGIPSDEEDEFGLSKWFESSEIHVAGLV 87
Query: 64 VGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPLA 123
VG+ C TPSHW++ TL EWL+ H IP L VDTR LTK +RE G + GK+V P A
Sbjct: 88 VGECCPTPSHWSATCTLHEWLQQHGIPGLQGVDTRELTKKLREQGSLLGKLVQKGTEPSA 147
Query: 124 VTVEDLVFVDPNRGNLVDQVSTKEVVTYNPTGSVHLCVVDCGLKYNQLRCLIQRGAKLSV 183
L FVDPN L +VS K +N G+ + VDCGLKYNQ+RCL Q GA+++V
Sbjct: 148 -----LPFVDPNARPLAPEVSIKTPRVFNAGGAPRIFAVDCGLKYNQIRCLCQLGAEVTV 202
Query: 184 IPWNHPIKVPQGWQPLFTNANDG 206
+PWNH + + + LF + G
Sbjct: 203 VPWNHELD-SRKYDGLFLSNGPG 224
Score = 260 (96.6 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 54/124 (43%), Positives = 73/124 (58%)
Query: 168 YNQLRCLIQRGAKLSVIPWNHPIKV-----PQGWQPLFTNANDGTNEGIVHESLPFFSVQ 222
+NQ CL+ + + NH V P GW PLFTNAND +NEGIVH++LPFFSVQ
Sbjct: 276 HNQ-PCLLVGTGRCFLTSQNHGFAVDADSLPAGWAPLFTNANDCSNEGIVHDNLPFFSVQ 334
Query: 223 FHPEHTAGPADLELLFDIFINAVRDSKT-RTPVPPIRKTIYDTLVPKDEALIAKSFQTPK 281
FHPEH AGP+D+ELLFD+F+ VRD+ +R+ + L P + + P+
Sbjct: 335 FHPEHRAGPSDMELLFDVFLETVRDTVAGNAEGRTVRERLAQRLCPPELPIPGSGLPPPR 394
Query: 282 KTSV 285
K +
Sbjct: 395 KVLI 398
Score = 144 (55.7 bits), Expect = 8.7e-65, Sum P(2) = 8.7e-65
Identities = 30/53 (56%), Positives = 37/53 (69%)
Query: 285 VRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDLAVKETVSIIKG 337
VRK+R++ GI P KQIDT+AAE PAQTNYLYLTY HDL + ++ G
Sbjct: 887 VRKLRQELGICPAVKQIDTVAAEWPAQTNYLYLTYWGNTHDLDFRTPHVLVLG 939
>SGD|S000003666 [details] [associations]
symbol:URA2 "Bifunctional carbamoylphosphate
synthetase/aspartate transcarbamylase" species:4932 "Saccharomyces
cerevisiae" [GO:0004070 "aspartate carbamoyltransferase activity"
evidence=IEA;IMP;IDA] [GO:0004088 "carbamoyl-phosphate synthase
(glutamine-hydrolyzing) activity" evidence=IEA;IDA] [GO:0016021
"integral to membrane" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006541 "glutamine metabolic process" evidence=IDA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006221
"pyrimidine nucleotide biosynthetic process" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006207 "'de novo' pyrimidine nucleobase biosynthetic process"
evidence=IEA;IDA;IMP] [GO:0045984 "negative regulation of
pyrimidine nucleobase metabolic process" evidence=IDA] [GO:0006520
"cellular amino acid metabolic process" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0016743 "carboxyl- or
carbamoyltransferase activity" evidence=IEA] [GO:0006543 "glutamine
catabolic process" evidence=IEA] [GO:0006807 "nitrogen compound
metabolic process" evidence=IEA] [GO:0070409 "carbamoyl phosphate
biosynthetic process" evidence=IEA] [GO:0044205 "'de novo' UMP
biosynthetic process" evidence=IEA] InterPro:IPR002082
InterPro:IPR005479 InterPro:IPR005481 InterPro:IPR005483
InterPro:IPR006130 InterPro:IPR006131 InterPro:IPR006132
InterPro:IPR006274 InterPro:IPR006275 InterPro:IPR011761
InterPro:IPR013815 InterPro:IPR013816 Pfam:PF00185 Pfam:PF00289
Pfam:PF02729 Pfam:PF02786 PRINTS:PR00098 PRINTS:PR00100
PRINTS:PR00101 PROSITE:PS00097 PROSITE:PS00866 PROSITE:PS00867
PROSITE:PS50975 UniPathway:UPA00070 InterPro:IPR016185
SGD:S000003666 Pfam:PF00117 Pfam:PF02787 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 EMBL:BK006943 GO:GO:0046872
GO:GO:0016597 Gene3D:3.30.1490.20 Gene3D:3.30.470.20
Gene3D:3.40.50.20 SUPFAM:SSF52440 EMBL:X87371 EMBL:M27174
GO:GO:0006541 GO:GO:0004088 GO:GO:0044205 GO:GO:0070409
GO:GO:0006543 Gene3D:3.50.30.20 InterPro:IPR002474
InterPro:IPR017926 Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021
TIGRFAMs:TIGR01368 PROSITE:PS51273 GO:GO:0006207 eggNOG:COG0458
Gene3D:1.10.1030.10 Gene3D:3.40.50.1380 InterPro:IPR005480
InterPro:IPR011607 Pfam:PF02142 SMART:SM01096 SMART:SM00851
SUPFAM:SSF48108 SUPFAM:SSF52335 TIGRFAMs:TIGR01369 SUPFAM:SSF53671
GO:GO:0004070 TIGRFAMs:TIGR00670 MEROPS:C26.956
HOGENOM:HOG000234584 KO:K11541 OrthoDB:EOG48WG90 OMA:NVKCAKL
EMBL:Z49405 EMBL:X05553 EMBL:DQ881452 EMBL:EF123133 EMBL:D28139
EMBL:J04711 PIR:S56911 RefSeq:NP_012405.2 DIP:DIP-7215N
IntAct:P07259 MINT:MINT-1323915 STRING:P07259 PaxDb:P07259
PeptideAtlas:P07259 PRIDE:P07259 EnsemblFungi:YJL130C GeneID:853311
KEGG:sce:YJL130C CYGD:YJL130c GeneTree:ENSGT00700000104680
NextBio:973648 Genevestigator:P07259 GermOnline:YJL130C
GO:GO:0045984 Uniprot:P07259
Length = 2214
Score = 349 (127.9 bits), Expect = 4.5e-64, Sum P(3) = 4.5e-64
Identities = 86/194 (44%), Positives = 116/194 (59%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQD-KDE--HGILKYFESHRIWIS 60
VFQTGMVGYPE++TDPSY QILV+TYPL+GNYGVP +DE + +YFES+RI I+
Sbjct: 48 VFQTGMVGYPESVTDPSYEGQILVITYPLVGNYGVPDMHLRDELVEELPRYFESNRIHIA 107
Query: 61 GLIVGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIV---HG 117
GL++ D SH+ + S+LG+WL+ IPA+ VDTR LTKH+R+ G + G++ G
Sbjct: 108 GLVISHYTDEYSHYLAKSSLGKWLQNEGIPAVYGVDTRSLTKHLRDAGSMLGRLSLEKSG 167
Query: 118 SVAPLAVTVE-----DLV-FVDPNRGNLVDQVSTKEVVTYNPTGSVHLCVVDCGLKYNQL 171
S ++ + D+ +VDPN NLV +VS E Y P + G L
Sbjct: 168 SDRTISRSSSWRSAFDVPEWVDPNVQNLVSKVSINEPKLYVPPADNKHIELQTGPDGKVL 227
Query: 172 RCL-IQRGAKLSVI 184
R L I G K + I
Sbjct: 228 RILAIDVGMKYNQI 241
Score = 218 (81.8 bits), Expect = 4.5e-64, Sum P(3) = 4.5e-64
Identities = 39/63 (61%), Positives = 46/63 (73%)
Query: 195 GWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRDSKTRTPV 254
GW+PLF NAND +NEGI H LP+FSVQFHPE T GP D E LFD+FI AV++ K +
Sbjct: 357 GWKPLFVNANDDSNEGIYHSELPYFSVQFHPESTPGPRDTEFLFDVFIQAVKEFKYTQVL 416
Query: 255 PPI 257
PI
Sbjct: 417 KPI 419
Score = 165 (63.1 bits), Expect = 4.5e-64, Sum P(3) = 4.5e-64
Identities = 32/69 (46%), Positives = 49/69 (71%)
Query: 269 DEALIAKSFQTPKKTSVRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDLAV 328
D+ IA+ F + ++R++R++ GI P+ KQIDT+AAE PA TNYLY+TYNA +HDL+
Sbjct: 919 DDRQIAR-FLDSNEVAIRRLRKEYGITPFVKQIDTVAAEFPAYTNYLYMTYNADSHDLSF 977
Query: 329 KETVSIIKG 337
+ ++ G
Sbjct: 978 DDHGVMVLG 986
Score = 135 (52.6 bits), Expect = 7.6e-37, Sum P(3) = 7.6e-37
Identities = 33/90 (36%), Positives = 46/90 (51%)
Query: 131 FVDPNRGNLVDQVSTKEVVTY-------------NPTGSV-HLCVVDCGLKYNQLRCLIQ 176
+VDPN NLV +VS E Y P G V + +D G+KYNQ+RC I+
Sbjct: 187 WVDPNVQNLVSKVSINEPKLYVPPADNKHIELQTGPDGKVLRILAIDVGMKYNQIRCFIK 246
Query: 177 RGAKLSVIPWNHPIKVPQGWQPLFTNANDG 206
RG +L V+PWN+ + + LF + G
Sbjct: 247 RGVELKVVPWNYDF-TKEDYDGLFISNGPG 275
Score = 37 (18.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 16/54 (29%), Positives = 20/54 (37%)
Query: 85 RAHNIPALANVDTR-RLTKHIRECGVVSGKIVHGSVAPLAVTVEDLVFVDPNRG 137
R HNIP + + R +T V + G PL V D D N G
Sbjct: 324 RGHNIPCTSTISGRCYITSQNHGFAVDVDTLTSGW-KPLFVNAND----DSNEG 372
>UNIPROTKB|J9P266 [details] [associations]
symbol:CAD "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070409 "carbamoyl phosphate biosynthetic
process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016812 "hydrolase activity, acting on
carbon-nitrogen (but not peptide) bonds, in cyclic amides"
evidence=IEA] [GO:0016597 "amino acid binding" evidence=IEA]
[GO:0006543 "glutamine catabolic process" evidence=IEA] [GO:0006207
"'de novo' pyrimidine nucleobase biosynthetic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004070
"aspartate carbamoyltransferase activity" evidence=IEA]
InterPro:IPR002082 InterPro:IPR002195 InterPro:IPR005479
InterPro:IPR005481 InterPro:IPR005483 InterPro:IPR006130
InterPro:IPR006131 InterPro:IPR006132 InterPro:IPR006274
InterPro:IPR006275 InterPro:IPR011059 InterPro:IPR011761
InterPro:IPR013815 InterPro:IPR013816 Pfam:PF00185 Pfam:PF00289
Pfam:PF02729 Pfam:PF02786 PRINTS:PR00098 PRINTS:PR00100
PRINTS:PR00101 PROSITE:PS00482 PROSITE:PS00483 PROSITE:PS00866
PROSITE:PS00867 PROSITE:PS50975 InterPro:IPR016185 Pfam:PF00117
Pfam:PF02787 GO:GO:0005524 GO:GO:0046872 GO:GO:0016597
Gene3D:3.30.1490.20 Gene3D:3.30.470.20 Gene3D:3.40.50.20
SUPFAM:SSF52440 SUPFAM:SSF51338 GO:GO:0070409 GO:GO:0006543
Gene3D:3.50.30.20 InterPro:IPR002474 InterPro:IPR017926
Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021 TIGRFAMs:TIGR01368
PROSITE:PS51273 GO:GO:0006207 Gene3D:1.10.1030.10
Gene3D:3.40.50.1380 InterPro:IPR005480 InterPro:IPR011607
Pfam:PF02142 SMART:SM01096 SMART:SM00851 SUPFAM:SSF48108
SUPFAM:SSF52335 TIGRFAMs:TIGR01369 GeneTree:ENSGT00390000015604
GO:GO:0016812 SUPFAM:SSF53671 GO:GO:0004070 TIGRFAMs:TIGR00670
EMBL:AAEX03010804 Ensembl:ENSCAFT00000049604 Uniprot:J9P266
Length = 2162
Score = 536 (193.7 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
Identities = 102/198 (51%), Positives = 135/198 (68%)
Query: 9 MVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLIVGDMC 68
MVGYPEA+TDPSY QILVLTYPLIGNYG+P + DE G+ K+FES I ++GL+VG+ C
Sbjct: 1 MVGYPEALTDPSYKAQILVLTYPLIGNYGIPTDEVDEFGLSKWFESSGIHVAGLVVGECC 60
Query: 69 DTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPLAVTVED 128
TPSHW++ TL +WL+ H IP L VDTR LTK +RE G + GK+V P A
Sbjct: 61 PTPSHWSATRTLHQWLQQHGIPGLQGVDTRELTKKLREQGSLLGKLVQDGTEPSA----- 115
Query: 129 LVFVDPNRGNLVDQVSTKEVVTYNPTGSVHLCVVDCGLKYNQLRCLIQRGAKLSVIPWNH 188
L F+DPN LV +VS K +N G+ + +DCGLKYNQ+RCL QRGA+++V+PW+H
Sbjct: 116 LPFLDPNARPLVPEVSIKAPRVFNAGGTPRILALDCGLKYNQIRCLCQRGAEVTVVPWDH 175
Query: 189 PIKVPQGWQPLFTNANDG 206
+ Q ++ +F + G
Sbjct: 176 TLD-SQEYEGVFLSNGPG 192
Score = 263 (97.6 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 55/124 (44%), Positives = 73/124 (58%)
Query: 168 YNQLRCLIQRGAKLSVIPWNHPIKV-----PQGWQPLFTNANDGTNEGIVHESLPFFSVQ 222
+NQ CL+ + + NH V P GW PLFTNAND +NEGIVH+SLPFFSVQ
Sbjct: 244 HNQ-PCLLVGSGRCFLTSQNHGFAVETDSLPAGWLPLFTNANDRSNEGIVHDSLPFFSVQ 302
Query: 223 FHPEHTAGPADLELLFDIFINAVRDSKTRTPVP-PIRKTIYDTLVPKDEALIAKSFQTPK 281
FHPEH AGP+D+ELLFDIF+ V+++ P +R+ + + L P P+
Sbjct: 303 FHPEHQAGPSDMELLFDIFLETVKEATAGNPGGWTVRERLIERLCPPGIPTPGSGLPPPR 362
Query: 282 KTSV 285
K +
Sbjct: 363 KVLI 366
Score = 152 (58.6 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
Identities = 31/54 (57%), Positives = 39/54 (72%)
Query: 284 SVRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDLAVKETVSIIKG 337
+VRK+R++ GI P KQIDT+AAE PAQTNYLYLTY T HDL + ++ G
Sbjct: 854 AVRKLRQELGICPAVKQIDTVAAEWPAQTNYLYLTYWGTTHDLTFRTPHVLVLG 907
>ZFIN|ZDB-GENE-021030-4 [details] [associations]
symbol:cad "carbamoyl-phosphate synthetase 2,
aspartate transcarbamylase, and dihydroorotase" species:7955 "Danio
rerio" [GO:0016743 "carboxyl- or carbamoyltransferase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0004070
"aspartate carbamoyltransferase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006207 "'de novo' pyrimidine
nucleobase biosynthetic process" evidence=IEA;IMP] [GO:0006520
"cellular amino acid metabolic process" evidence=IEA] [GO:0006807
"nitrogen compound metabolic process" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0016810 "hydrolase activity,
acting on carbon-nitrogen (but not peptide) bonds" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0070409
"carbamoyl phosphate biosynthetic process" evidence=IEA]
[GO:0006543 "glutamine catabolic process" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0016812 "hydrolase activity,
acting on carbon-nitrogen (but not peptide) bonds, in cyclic
amides" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] [GO:0016740 "transferase activity"
evidence=IEA] HAMAP:MF_00001 HAMAP:MF_01209 InterPro:IPR002082
InterPro:IPR002195 InterPro:IPR005479 InterPro:IPR005481
InterPro:IPR005483 InterPro:IPR006130 InterPro:IPR006131
InterPro:IPR006132 InterPro:IPR006274 InterPro:IPR006275
InterPro:IPR006680 InterPro:IPR011059 InterPro:IPR011761
InterPro:IPR013815 InterPro:IPR013816 Pfam:PF00185 Pfam:PF00289
Pfam:PF01979 Pfam:PF02729 Pfam:PF02786 PRINTS:PR00098
PRINTS:PR00100 PRINTS:PR00101 PROSITE:PS00097 PROSITE:PS00482
PROSITE:PS00483 PROSITE:PS00866 PROSITE:PS00867 PROSITE:PS50975
InterPro:IPR016185 Pfam:PF00117 Pfam:PF02787 ZFIN:ZDB-GENE-021030-4
GO:GO:0005524 GO:GO:0046872 GO:GO:0016597 Gene3D:3.30.1490.20
Gene3D:3.30.470.20 Gene3D:3.40.50.20 SUPFAM:SSF52440 GO:GO:0060041
SUPFAM:SSF51338 CTD:790 GO:GO:0070409 GO:GO:0006543
Gene3D:3.50.30.20 InterPro:IPR002474 InterPro:IPR017926
Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021 TIGRFAMs:TIGR01368
PROSITE:PS51273 GO:GO:0006207 Gene3D:1.10.1030.10
Gene3D:3.40.50.1380 InterPro:IPR005480 InterPro:IPR011607
Pfam:PF02142 SMART:SM01096 SMART:SM00851 SUPFAM:SSF48108
SUPFAM:SSF52335 TIGRFAMs:TIGR01369 HOVERGEN:HBG000279 GO:GO:0016812
SUPFAM:SSF53671 KO:K11540 GO:GO:0004070 TIGRFAMs:TIGR00670
HOGENOM:HOG000234584 EMBL:AY751464 IPI:IPI00931537
RefSeq:NP_001009884.1 UniGene:Dr.2668 ProteinModelPortal:Q5XLV0
STRING:Q5XLV0 PRIDE:Q5XLV0 GeneID:266992 KEGG:dre:266992
InParanoid:Q5XLV0 NextBio:20804852 ArrayExpress:Q5XLV0 Bgee:Q5XLV0
Uniprot:Q5XLV0
Length = 2230
Score = 540 (195.1 bits), Expect = 1.3e-61, Sum P(2) = 1.3e-61
Identities = 104/207 (50%), Positives = 141/207 (68%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLI 63
VFQTGMVGYPEA+TDPSY QIL LTYP+IGNYG+P + E G+ K+FES +I + LI
Sbjct: 28 VFQTGMVGYPEALTDPSYKSQILTLTYPMIGNYGIPKDEDGEFGLSKWFESSQIHAAALI 87
Query: 64 VGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGK-IVHGSVAPL 122
VG++ + PSHW++A +L EWLR IP L VDTR LTK IRE G + GK +V G+ A
Sbjct: 88 VGEVSENPSHWSAAKSLDEWLREQGIPGLQGVDTRCLTKKIREKGTMLGKLVVEGTPA-- 145
Query: 123 AVTVEDLVFVDPNRGNLVDQVSTKEVVTYNPTGSVHLCVVDCGLKYNQLRCLIQRGAKLS 182
+++ F +P+ NLV +VS K +NP G+V + +DCG+KYNQ+RCL QRGA+++
Sbjct: 146 ----DNIPFDNPDARNLVKEVSMKAPKVFNPEGTVRITAIDCGIKYNQIRCLCQRGARVT 201
Query: 183 VIPWNHPIKVPQGWQPLFTNANDGTNE 209
V+PW+ P+ + LF + G E
Sbjct: 202 VVPWDQPLD-SNDFDGLFISNGPGNPE 227
Score = 214 (80.4 bits), Expect = 7.4e-24, Sum P(2) = 7.4e-24
Identities = 44/87 (50%), Positives = 56/87 (64%)
Query: 168 YNQLRCLIQRGAKLSVIPWNH-----PIKVPQGWQPLFTNANDGTNEGIVHESLPFFSVQ 222
+NQ C+ + ++ + NH P +P+ W LFTNAND T+EGIVH P FSVQ
Sbjct: 276 HNQ-PCIHKGTSRCYITSQNHGFAVDPETLPKDWDVLFTNANDQTSEGIVHNHKPLFSVQ 334
Query: 223 FHPEHTAGPADLELLFDIFINAVRDSK 249
FHPEH AGP DL LFD+F++ VRD K
Sbjct: 335 FHPEHMAGPTDLVGLFDVFLDTVRDVK 361
Score = 139 (54.0 bits), Expect = 1.3e-61, Sum P(2) = 1.3e-61
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 273 IAKSFQTPKKTSVRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDLAVKETV 332
IA++ Q+ + +VRK+R D I P KQIDT+AAE PAQTNYLYLTY+ + D+ ++
Sbjct: 881 IAQAVQSTE-LAVRKLRRDWKIFPVVKQIDTVAAEWPAQTNYLYLTYHGSESDVVFEQPH 939
Query: 333 SIIKG 337
++ G
Sbjct: 940 VMVIG 944
>CGD|CAL0000759 [details] [associations]
symbol:URA2 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003922
"GMP synthase (glutamine-hydrolyzing) activity" evidence=IEA]
[GO:0004151 "dihydroorotase activity" evidence=IEA] [GO:0004070
"aspartate carbamoyltransferase activity" evidence=IEA] [GO:0004088
"carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity"
evidence=IEA] [GO:0070409 "carbamoyl phosphate biosynthetic
process" evidence=IEA] [GO:0006543 "glutamine catabolic process"
evidence=IEA] [GO:0006541 "glutamine metabolic process"
evidence=IEA] [GO:0045984 "negative regulation of pyrimidine
nucleobase metabolic process" evidence=IEA] [GO:0006207 "'de novo'
pyrimidine nucleobase biosynthetic process" evidence=IEA]
HAMAP:MF_00001 HAMAP:MF_01209 InterPro:IPR002082 InterPro:IPR005479
InterPro:IPR005481 InterPro:IPR005483 InterPro:IPR006130
InterPro:IPR006131 InterPro:IPR006132 InterPro:IPR006274
InterPro:IPR006275 InterPro:IPR011761 InterPro:IPR013815
InterPro:IPR013816 Pfam:PF00185 Pfam:PF00289 Pfam:PF02729
Pfam:PF02786 PRINTS:PR00098 PRINTS:PR00100 PRINTS:PR00101
PROSITE:PS00097 PROSITE:PS00866 PROSITE:PS00867 PROSITE:PS50975
InterPro:IPR016185 CGD:CAL0000759 Pfam:PF00117 Pfam:PF02787
GO:GO:0005524 GO:GO:0046872 GO:GO:0016597 Gene3D:3.30.1490.20
Gene3D:3.30.470.20 Gene3D:3.40.50.20 SUPFAM:SSF52440 GO:GO:0070409
GO:GO:0006543 Gene3D:3.50.30.20 InterPro:IPR002474
InterPro:IPR017926 Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021
TIGRFAMs:TIGR01368 PROSITE:PS51273 GO:GO:0006207 eggNOG:COG0458
Gene3D:1.10.1030.10 Gene3D:3.40.50.1380 InterPro:IPR005480
InterPro:IPR011607 Pfam:PF02142 SMART:SM01096 SMART:SM00851
SUPFAM:SSF48108 SUPFAM:SSF52335 TIGRFAMs:TIGR01369 SUPFAM:SSF53671
GO:GO:0004070 TIGRFAMs:TIGR00670 KO:K11541 EMBL:AACQ01000150
RefSeq:XP_712650.1 ProteinModelPortal:Q59SN3 STRING:Q59SN3
GeneID:3645728 KEGG:cal:CaO19.2360 Uniprot:Q59SN3
Length = 2216
Score = 332 (121.9 bits), Expect = 2.7e-60, Sum P(3) = 2.7e-60
Identities = 65/115 (56%), Positives = 85/115 (73%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQ---DKD-EHGILKYFESHRIWI 59
VFQTGMVGYPE++TDPSY QILV+TYPL+GNYGVP + D+D E + KYFES++I I
Sbjct: 46 VFQTGMVGYPESITDPSYEGQILVITYPLVGNYGVPDRELLDEDYEPALPKYFESNKIHI 105
Query: 60 SGLIVGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKI 114
+GL+V + SHW + S+LG+WL+ IPA+ VDTR LTK +RE G G++
Sbjct: 106 AGLVVAHYTEEYSHWLAKSSLGKWLQEQGIPAIYGVDTRSLTKRLREKGSTLGRL 160
Score = 211 (79.3 bits), Expect = 2.7e-60, Sum P(3) = 2.7e-60
Identities = 38/53 (71%), Positives = 42/53 (79%)
Query: 195 GWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRD 247
GW+ LF NANDG+NEGI HES PFFSVQFHPE T GP D E LFD+FI +V D
Sbjct: 360 GWKELFVNANDGSNEGIYHESKPFFSVQFHPESTPGPRDTEFLFDVFIKSVVD 412
Score = 153 (58.9 bits), Expect = 2.7e-60, Sum P(3) = 2.7e-60
Identities = 32/69 (46%), Positives = 47/69 (68%)
Query: 269 DEALIAKSFQTPKKTSVRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDLAV 328
++ IAK F + ++R++R+D GI P+ KQIDT+AAE PA TNYLY+TYNA + D+
Sbjct: 924 EDRQIAK-FLGSNEVAIRRLRKDAGIIPFVKQIDTVAAEFPAFTNYLYVTYNADSSDVKF 982
Query: 329 KETVSIIKG 337
+ I+ G
Sbjct: 983 DDNGVIVLG 991
Score = 134 (52.2 bits), Expect = 3.1e-52, Sum P(3) = 3.1e-52
Identities = 31/88 (35%), Positives = 47/88 (53%)
Query: 131 FVDPNRGNLVDQVSTKEVVTYNP-----------TGS-VHLCVVDCGLKYNQLRCLIQRG 178
F DPN NLV +VST + + Y P G + + VD G+KYNQ+RC ++RG
Sbjct: 192 FDDPNVKNLVAKVSTDKPILYTPKKTNENIKLGKNGKPIRILAVDVGMKYNQIRCFVRRG 251
Query: 179 AKLSVIPWNHPIKVPQGWQPLFTNANDG 206
+L V+PW++ + + LF + G
Sbjct: 252 VELLVVPWDYDFTTEE-YDGLFISNGPG 278
Score = 39 (18.8 bits), Expect = 1.1e-24, Sum P(3) = 1.1e-24
Identities = 13/57 (22%), Positives = 22/57 (38%)
Query: 42 DKDEHGILKYFESHRIWISGLIVGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTR 98
DK + K + + + G+ +G + S L R HNIP + + R
Sbjct: 284 DKTVERLQKILKEGKTPVFGICLGHQLLARATGASTLKLKFGNRGHNIPCTSTISGR 340
>ASPGD|ASPL0000042502 [details] [associations]
symbol:cpa species:162425 "Emericella nidulans"
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=RCA] [GO:0004070 "aspartate carbamoyltransferase activity"
evidence=RCA] [GO:0004088 "carbamoyl-phosphate synthase
(glutamine-hydrolyzing) activity" evidence=IEA;RCA] [GO:0006525
"arginine metabolic process" evidence=RCA] [GO:0005951
"carbamoyl-phosphate synthase complex" evidence=IEA] [GO:0070409
"carbamoyl phosphate biosynthetic process" evidence=IEA]
[GO:0006543 "glutamine catabolic process" evidence=IEA] [GO:0006526
"arginine biosynthetic process" evidence=IEA] InterPro:IPR006274
UniPathway:UPA00068 Pfam:PF00117 GO:GO:0005524 GO:GO:0005737
EMBL:BN001307 GO:GO:0006526 EMBL:AACD01000036 eggNOG:COG0505
HOGENOM:HOG000038087 KO:K01956 GO:GO:0004088 GO:GO:0070409
GO:GO:0006543 Gene3D:3.50.30.20 InterPro:IPR002474
InterPro:IPR017926 Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021
TIGRFAMs:TIGR01368 PROSITE:PS51273 HSSP:P0A6F1 EMBL:AJ224085
RefSeq:XP_659847.1 ProteinModelPortal:Q5BB37 STRING:Q5BB37
GeneID:2875485 KEGG:ani:AN2243.2 OMA:RATFTIR OrthoDB:EOG4N8VDH
Uniprot:Q5BB37
Length = 454
Score = 444 (161.4 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 91/207 (43%), Positives = 128/207 (61%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLI 63
VF T +VGYPE++TDPSY QILV T PLIGNYGVP ++D HG+LKYFES + +G++
Sbjct: 67 VFTTSLVGYPESLTDPSYRGQILVFTQPLIGNYGVPSTERDRHGLLKYFESPNLQAAGVV 126
Query: 64 VGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPLA 123
V D+ + SHW + +LGEW +PA++ VDTR + ++RE G +I G
Sbjct: 127 VADVAEQYSHWTAVQSLGEWCAREGVPAISGVDTRAIVTYLREQGSSLARITVGEEYDAD 186
Query: 124 VTVEDLVFVDPNRGNLVDQVSTK---EVVTYNPTGSVHLCVVDCGLKYNQLRCLIQRGAK 180
+D F DP + +LV QVSTK V +P H+ V+DCG+K N LR L+ RGA
Sbjct: 187 ---QDEAFTDPEQIHLVRQVSTKAPFHVSAADP--QCHVAVLDCGVKENILRSLVSRGAS 241
Query: 181 LSVIPWNHPI-KVPQGWQPLFTNANDG 206
++V P+++PI KV + +F + G
Sbjct: 242 ITVFPFDYPIHKVAHHFDGVFISNGPG 268
Score = 189 (71.6 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 38/88 (43%), Positives = 54/88 (61%)
Query: 192 VPQGWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRDSK-T 250
+P W+P F N ND +NEG++H+S P FS QFHPE GP D LFDI+I++V+ K +
Sbjct: 347 LPSDWKPYFVNLNDSSNEGMIHKSRPIFSTQFHPEAKGGPLDSSYLFDIYIDSVKKYKNS 406
Query: 251 RTPVPPIRKTIYDTLV----PKDEALIA 274
+ P R+TI L+ PK+ +A
Sbjct: 407 QLAFHPSRETIPSPLLVDLLPKERVDVA 434
Score = 47 (21.6 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 41 QDKDEHGILKYFESHRIWISGLIVGDMCDTPSHWNSASTLGEWLRAHNIPAL 92
QD H + + E+ ++ I G+ +G + L RAHNIPAL
Sbjct: 274 QDTTYH-LRRLMETSQVPIFGICLGHQLLALAAGARTVKLKYGNRAHNIPAL 324
>POMBASE|SPAC22G7.06c [details] [associations]
symbol:ura1 "carbamoyl-phosphate synthase (glutamine
hydrolyzing), aspartate carbamoyltransferase Ura1" species:4896
"Schizosaccharomyces pombe" [GO:0000050 "urea cycle" evidence=IC]
[GO:0003922 "GMP synthase (glutamine-hydrolyzing) activity"
evidence=IGI] [GO:0004070 "aspartate carbamoyltransferase activity"
evidence=IGI] [GO:0004088 "carbamoyl-phosphate synthase
(glutamine-hydrolyzing) activity" evidence=IGI] [GO:0004151
"dihydroorotase activity" evidence=IGI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006207 "'de
novo' pyrimidine nucleobase biosynthetic process" evidence=IGI]
[GO:0006221 "pyrimidine nucleotide biosynthetic process"
evidence=IEA] [GO:0006541 "glutamine metabolic process"
evidence=IGI] [GO:0006543 "glutamine catabolic process"
evidence=IEA] [GO:0016597 "amino acid binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0070409
"carbamoyl phosphate biosynthetic process" evidence=IEA]
InterPro:IPR002082 InterPro:IPR005479 InterPro:IPR005481
InterPro:IPR005483 InterPro:IPR006130 InterPro:IPR006131
InterPro:IPR006132 InterPro:IPR006274 InterPro:IPR006275
InterPro:IPR011059 InterPro:IPR011761 InterPro:IPR013815
InterPro:IPR013816 Pfam:PF00185 Pfam:PF00289 Pfam:PF02729
Pfam:PF02786 PRINTS:PR00098 PRINTS:PR00100 PRINTS:PR00101
PROSITE:PS00097 PROSITE:PS00866 PROSITE:PS00867 PROSITE:PS50975
UniPathway:UPA00070 InterPro:IPR016185 PomBase:SPAC22G7.06c
Pfam:PF00117 Pfam:PF02787 GO:GO:0005829 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0016597
Gene3D:3.30.1490.20 Gene3D:3.30.470.20 Gene3D:3.40.50.20
SUPFAM:SSF52440 SUPFAM:SSF51338 GO:GO:0000050 GO:GO:0006541
GO:GO:0004088 GO:GO:0044205 GO:GO:0070409 GO:GO:0006543
Gene3D:3.50.30.20 InterPro:IPR002474 InterPro:IPR017926
Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021 TIGRFAMs:TIGR01368
PROSITE:PS51273 GO:GO:0006207 eggNOG:COG0458 Gene3D:1.10.1030.10
Gene3D:3.40.50.1380 InterPro:IPR005480 InterPro:IPR011607
Pfam:PF02142 SMART:SM01096 SMART:SM00851 SUPFAM:SSF48108
SUPFAM:SSF52335 TIGRFAMs:TIGR01369 GO:GO:0003922 SUPFAM:SSF53671
GO:GO:0004070 GO:GO:0004151 TIGRFAMs:TIGR00670 HOGENOM:HOG000234584
KO:K11541 OrthoDB:EOG48WG90 EMBL:X81841 PIR:S65074 PIR:T11616
RefSeq:NP_593055.1 ProteinModelPortal:Q09794 DIP:DIP-59121N
STRING:Q09794 PRIDE:Q09794 EnsemblFungi:SPAC22G7.06c.1
GeneID:2541544 KEGG:spo:SPAC22G7.06c OMA:NVKCAKL NextBio:20802641
Uniprot:Q09794
Length = 2244
Score = 336 (123.3 bits), Expect = 5.9e-60, Sum P(3) = 5.9e-60
Identities = 73/165 (44%), Positives = 102/165 (61%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQD-KDE-HGILKYFESHRIWISG 61
VFQTGMVGYPE++TDPSY QILV T+P +GNYGVP + DE G+ KYFES++I ++
Sbjct: 85 VFQTGMVGYPESLTDPSYRGQILVFTFPTVGNYGVPDRRILDEISGLPKYFESNQIHVAA 144
Query: 62 LIVGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIV----HG 117
+I+ SH+ + S+LGEWL+ IP + +DTR LTK IR+ G + G+++
Sbjct: 145 IIISSYSQNYSHFLAHSSLGEWLKEQGIPGIFGIDTRALTKKIRDQGSMLGRLLIQKDES 204
Query: 118 SVAPLAVT---------VEDLVFVDPNRGNLVDQVSTKEVVTYNP 153
+ P ++T ED+ + +PN NL QVS KE Y P
Sbjct: 205 PINPSSITGLGKDWSTAFEDIPWKNPNTENLTSQVSIKEPKLYEP 249
Score = 201 (75.8 bits), Expect = 5.9e-60, Sum P(3) = 5.9e-60
Identities = 41/99 (41%), Positives = 54/99 (54%)
Query: 165 GLKYNQLRCLIQRGAKLSVIPWNHPIKVP-----QGWQPLFTNANDGTNEGIVHESLPFF 219
G + + + C + + NH V GW+ LF NANDG+NEGI + PFF
Sbjct: 358 GNRGHNIPCTCMISGRCYITSQNHGYAVDASSLSNGWKELFVNANDGSNEGIYNTEYPFF 417
Query: 220 SVQFHPEHTAGPADLELLFDIFINAVRDSKTRTPVPPIR 258
SVQFHPE T GP D E LFD+FI+ V+ S + P +
Sbjct: 418 SVQFHPESTPGPRDTEFLFDVFIDVVKRSADAKSLQPFK 456
Score = 156 (60.0 bits), Expect = 5.9e-60, Sum P(3) = 5.9e-60
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 276 SFQTPKKTSVRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDLAVKETVSII 335
+F + +VR++R + GIRP+ KQIDT+AAE PA TNYLY TYNA HD+ + ++
Sbjct: 959 AFMNSTELAVRRIRTEAGIRPFVKQIDTVAAEFPAFTNYLYTTYNAVEHDIHFNDKGVMV 1018
Query: 336 KG 337
G
Sbjct: 1019 LG 1020
Score = 142 (55.0 bits), Expect = 3.1e-17, Sum P(2) = 3.1e-17
Identities = 32/90 (35%), Positives = 48/90 (53%)
Query: 127 EDLVFVDPNRGNLVDQVSTKEVVTYNP---------TGSV-HLCVVDCGLKYNQLRCLIQ 176
ED+ + +PN NL QVS KE Y P G + + V+D G+KYNQ+RC +
Sbjct: 223 EDIPWKNPNTENLTSQVSIKEPKLYEPHPTTAIKKADGKIIRILVIDVGMKYNQIRCFLN 282
Query: 177 RGAKLSVIPWNHPIKVPQGWQPLFTNANDG 206
RG +L V+PW++ + + LF + G
Sbjct: 283 RGVELLVVPWDYDF-TKETYDGLFISNGPG 311
Score = 46 (21.3 bits), Expect = 1.8e-48, Sum P(3) = 1.8e-48
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 270 EALIAKSFQTPKKT---SVRKMREDNGIRPYNKQI 301
+A+I+ F+ PKK S+ +E + PY K++
Sbjct: 1383 KAMISTGFRLPKKNILISIGSYKEKAELLPYVKKL 1417
Score = 38 (18.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 11/51 (21%), Positives = 20/51 (39%)
Query: 48 ILKYFESHRIWISGLIVGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTR 98
+ + ES + + G+ G + S + + R HNIP + R
Sbjct: 323 VKRVLESKTVPVFGICFGHQIMARAAGASTTKMKFGNRGHNIPCTCMISGR 373
>ASPGD|ASPL0000059511 [details] [associations]
symbol:pyrABCN species:162425 "Emericella nidulans"
[GO:0004088 "carbamoyl-phosphate synthase (glutamine-hydrolyzing)
activity" evidence=ISA;RCA;IMP] [GO:0004070 "aspartate
carbamoyltransferase activity" evidence=ISA;RCA;IMP] [GO:0006207
"'de novo' pyrimidine nucleobase biosynthetic process"
evidence=ISA;IMP] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=RCA] [GO:0006525 "arginine metabolic
process" evidence=RCA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0070409 "carbamoyl phosphate biosynthetic process"
evidence=IEA] [GO:0006543 "glutamine catabolic process"
evidence=IEA] [GO:0071949 "FAD binding" evidence=IEA] [GO:0009882
"blue light photoreceptor activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003922 "GMP synthase (glutamine-hydrolyzing)
activity" evidence=IEA] [GO:0004151 "dihydroorotase activity"
evidence=IEA] [GO:0006541 "glutamine metabolic process"
evidence=IEA] InterPro:IPR002082 InterPro:IPR005479
InterPro:IPR005481 InterPro:IPR005483 InterPro:IPR006130
InterPro:IPR006131 InterPro:IPR006132 InterPro:IPR006274
InterPro:IPR006275 InterPro:IPR011761 InterPro:IPR013815
InterPro:IPR013816 Pfam:PF00185 Pfam:PF00289 Pfam:PF02729
Pfam:PF02786 PRINTS:PR00098 PRINTS:PR00100 PRINTS:PR00101
PROSITE:PS00097 PROSITE:PS00866 PROSITE:PS00867 PROSITE:PS50975
UniPathway:UPA00070 InterPro:IPR016185 Pfam:PF00117 Pfam:PF02787
GO:GO:0005524 GO:GO:0006520 EMBL:BN001308 GO:GO:0046872
GO:GO:0016597 EMBL:AACD01000007 Gene3D:3.30.1490.20
Gene3D:3.30.470.20 Gene3D:3.40.50.20 SUPFAM:SSF52440 GO:GO:0004088
GO:GO:0044205 GO:GO:0070409 GO:GO:0006543 Gene3D:3.50.30.20
InterPro:IPR002474 InterPro:IPR017926 Pfam:PF00988 SMART:SM01097
SUPFAM:SSF52021 TIGRFAMs:TIGR01368 PROSITE:PS51273 GO:GO:0006207
eggNOG:COG0458 Gene3D:1.10.1030.10 Gene3D:3.40.50.1380
InterPro:IPR005480 InterPro:IPR011607 Pfam:PF02142 SMART:SM01096
SMART:SM00851 SUPFAM:SSF48108 SUPFAM:SSF52335 TIGRFAMs:TIGR01369
SUPFAM:SSF53671 GO:GO:0004070 TIGRFAMs:TIGR00670 EMBL:AF112473
RefSeq:XP_658169.1 ProteinModelPortal:O93937 STRING:O93937
MEROPS:C26.956 PRIDE:O93937 EnsemblFungi:CADANIAT00002113
GeneID:2876339 KEGG:ani:AN0565.2 HOGENOM:HOG000234584 KO:K11541
OMA:VTKASIA OrthoDB:EOG48WG90 Uniprot:O93937
Length = 2275
Score = 328 (120.5 bits), Expect = 6.3e-60, Sum P(3) = 6.3e-60
Identities = 78/171 (45%), Positives = 110/171 (64%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDK-DE--HGILKYFESHRIWIS 60
VFQTGMVGYPE++TDPSY QILV+T+PL+GNYGVP ++ DE + K+FES I I+
Sbjct: 86 VFQTGMVGYPESITDPSYRGQILVITFPLVGNYGVPSRETMDELLKTLPKHFESTEIHIA 145
Query: 61 GLIVGDMC-DTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIV-H-G 117
L+V + SH+ + S+LG+WL+ +PA+ VDTR LTK IR+ G + G+++ H
Sbjct: 146 ALVVATYAGENYSHFLAESSLGQWLKEQGVPAIHGVDTRALTKRIRQKGSMLGRLLLHKA 205
Query: 118 SVAP----LAV-----TVEDLVFVDPNRGNLVDQVSTKEVVTYNPTGSVHL 159
VA LA + E + +VDPN NLV +VS +E ++P +V L
Sbjct: 206 DVAETDAALAQDTWKSSFEQIDWVDPNTKNLVSEVSIREPKLFSPPENVAL 256
Score = 217 (81.4 bits), Expect = 6.3e-60, Sum P(3) = 6.3e-60
Identities = 38/57 (66%), Positives = 45/57 (78%)
Query: 192 VPQGWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRDS 248
+P WQ LF NANDG+NEGI H S P+FSVQFHPE T GP D E LFD+FINA++D+
Sbjct: 394 LPSDWQELFVNANDGSNEGIRHVSRPYFSVQFHPESTPGPRDTEYLFDVFINAIKDT 450
Score = 148 (57.2 bits), Expect = 6.3e-60, Sum P(3) = 6.3e-60
Identities = 30/65 (46%), Positives = 45/65 (69%)
Query: 273 IAKSFQTPKKTSVRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDLAVKETV 332
+AK F + + ++R++R + GI P KQIDT+AAE P+ TNYLYLTYNA+ HD+ +
Sbjct: 963 LAK-FLSSNELAIRRLRVEAGIIPIVKQIDTVAAEFPSVTNYLYLTYNASEHDVRFDDNG 1021
Query: 333 SIIKG 337
++ G
Sbjct: 1022 IMVLG 1026
Score = 142 (55.0 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 35/93 (37%), Positives = 53/93 (56%)
Query: 127 EDLVFVDPNRGNLVDQVSTKEVVTYNPTGSV---H--------LCVVDCGLKYNQLRCLI 175
E + +VDPN NLV +VS +E ++P +V H LC+ D GLK+NQLRCL+
Sbjct: 224 EQIDWVDPNTKNLVSEVSIREPKLFSPPENVALKHPSSRPIRVLCL-DVGLKFNQLRCLV 282
Query: 176 QRGAKLSVIPWNH--PIKVPQGWQPLFTNANDG 206
RG ++ V+PW++ P + + LF + G
Sbjct: 283 ARGVEVLVVPWDYDFPTLAGKDYDGLFVSNGPG 315
Score = 37 (18.1 bits), Expect = 2.5e-48, Sum P(3) = 2.5e-48
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 270 EALIAKSFQTPKKTSVRKMREDNGI-----RPY 297
E +IA+ ++ PKK + D+ + RPY
Sbjct: 1796 EDIIARLYENPKKIFELHDQSDSSVEVEIDRPY 1828
>UNIPROTKB|O93937 [details] [associations]
symbol:pyrABCN "Protein pyrABCN" species:227321
"Aspergillus nidulans FGSC A4" [GO:0004070 "aspartate
carbamoyltransferase activity" evidence=TAS] [GO:0004088
"carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity"
evidence=TAS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006207 "'de novo' pyrimidine nucleobase biosynthetic process"
evidence=TAS] [GO:0006520 "cellular amino acid metabolic process"
evidence=IDA] [GO:0006807 "nitrogen compound metabolic process"
evidence=IDA] InterPro:IPR002082 InterPro:IPR005479
InterPro:IPR005481 InterPro:IPR005483 InterPro:IPR006130
InterPro:IPR006131 InterPro:IPR006132 InterPro:IPR006274
InterPro:IPR006275 InterPro:IPR011761 InterPro:IPR013815
InterPro:IPR013816 Pfam:PF00185 Pfam:PF00289 Pfam:PF02729
Pfam:PF02786 PRINTS:PR00098 PRINTS:PR00100 PRINTS:PR00101
PROSITE:PS00097 PROSITE:PS00866 PROSITE:PS00867 PROSITE:PS50975
UniPathway:UPA00070 InterPro:IPR016185 Pfam:PF00117 Pfam:PF02787
GO:GO:0005524 GO:GO:0006520 EMBL:BN001308 GO:GO:0046872
GO:GO:0016597 EMBL:AACD01000007 Gene3D:3.30.1490.20
Gene3D:3.30.470.20 Gene3D:3.40.50.20 SUPFAM:SSF52440 GO:GO:0004088
GO:GO:0044205 GO:GO:0070409 GO:GO:0006543 Gene3D:3.50.30.20
InterPro:IPR002474 InterPro:IPR017926 Pfam:PF00988 SMART:SM01097
SUPFAM:SSF52021 TIGRFAMs:TIGR01368 PROSITE:PS51273 GO:GO:0006207
eggNOG:COG0458 Gene3D:1.10.1030.10 Gene3D:3.40.50.1380
InterPro:IPR005480 InterPro:IPR011607 Pfam:PF02142 SMART:SM01096
SMART:SM00851 SUPFAM:SSF48108 SUPFAM:SSF52335 TIGRFAMs:TIGR01369
SUPFAM:SSF53671 GO:GO:0004070 TIGRFAMs:TIGR00670 EMBL:AF112473
RefSeq:XP_658169.1 ProteinModelPortal:O93937 STRING:O93937
MEROPS:C26.956 PRIDE:O93937 EnsemblFungi:CADANIAT00002113
GeneID:2876339 KEGG:ani:AN0565.2 HOGENOM:HOG000234584 KO:K11541
OMA:VTKASIA OrthoDB:EOG48WG90 Uniprot:O93937
Length = 2275
Score = 328 (120.5 bits), Expect = 6.3e-60, Sum P(3) = 6.3e-60
Identities = 78/171 (45%), Positives = 110/171 (64%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDK-DE--HGILKYFESHRIWIS 60
VFQTGMVGYPE++TDPSY QILV+T+PL+GNYGVP ++ DE + K+FES I I+
Sbjct: 86 VFQTGMVGYPESITDPSYRGQILVITFPLVGNYGVPSRETMDELLKTLPKHFESTEIHIA 145
Query: 61 GLIVGDMC-DTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIV-H-G 117
L+V + SH+ + S+LG+WL+ +PA+ VDTR LTK IR+ G + G+++ H
Sbjct: 146 ALVVATYAGENYSHFLAESSLGQWLKEQGVPAIHGVDTRALTKRIRQKGSMLGRLLLHKA 205
Query: 118 SVAP----LAV-----TVEDLVFVDPNRGNLVDQVSTKEVVTYNPTGSVHL 159
VA LA + E + +VDPN NLV +VS +E ++P +V L
Sbjct: 206 DVAETDAALAQDTWKSSFEQIDWVDPNTKNLVSEVSIREPKLFSPPENVAL 256
Score = 217 (81.4 bits), Expect = 6.3e-60, Sum P(3) = 6.3e-60
Identities = 38/57 (66%), Positives = 45/57 (78%)
Query: 192 VPQGWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRDS 248
+P WQ LF NANDG+NEGI H S P+FSVQFHPE T GP D E LFD+FINA++D+
Sbjct: 394 LPSDWQELFVNANDGSNEGIRHVSRPYFSVQFHPESTPGPRDTEYLFDVFINAIKDT 450
Score = 148 (57.2 bits), Expect = 6.3e-60, Sum P(3) = 6.3e-60
Identities = 30/65 (46%), Positives = 45/65 (69%)
Query: 273 IAKSFQTPKKTSVRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDLAVKETV 332
+AK F + + ++R++R + GI P KQIDT+AAE P+ TNYLYLTYNA+ HD+ +
Sbjct: 963 LAK-FLSSNELAIRRLRVEAGIIPIVKQIDTVAAEFPSVTNYLYLTYNASEHDVRFDDNG 1021
Query: 333 SIIKG 337
++ G
Sbjct: 1022 IMVLG 1026
Score = 142 (55.0 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 35/93 (37%), Positives = 53/93 (56%)
Query: 127 EDLVFVDPNRGNLVDQVSTKEVVTYNPTGSV---H--------LCVVDCGLKYNQLRCLI 175
E + +VDPN NLV +VS +E ++P +V H LC+ D GLK+NQLRCL+
Sbjct: 224 EQIDWVDPNTKNLVSEVSIREPKLFSPPENVALKHPSSRPIRVLCL-DVGLKFNQLRCLV 282
Query: 176 QRGAKLSVIPWNH--PIKVPQGWQPLFTNANDG 206
RG ++ V+PW++ P + + LF + G
Sbjct: 283 ARGVEVLVVPWDYDFPTLAGKDYDGLFVSNGPG 315
Score = 37 (18.1 bits), Expect = 2.5e-48, Sum P(3) = 2.5e-48
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 270 EALIAKSFQTPKKTSVRKMREDNGI-----RPY 297
E +IA+ ++ PKK + D+ + RPY
Sbjct: 1796 EDIIARLYENPKKIFELHDQSDSSVEVEIDRPY 1828
>UNIPROTKB|G4MVB1 [details] [associations]
symbol:MGG_01743 "Carbamoyl-phosphate synthase subunit
arginine-specific small" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] HAMAP:MF_01209
InterPro:IPR006274 Pfam:PF00117 GO:GO:0006526 EMBL:CM001232
KO:K01956 GO:GO:0004088 GO:GO:0070409 GO:GO:0006543
Gene3D:3.50.30.20 InterPro:IPR002474 InterPro:IPR017926
Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021 TIGRFAMs:TIGR01368
PROSITE:PS51273 GO:GO:0005951 RefSeq:XP_003714740.1
EnsemblFungi:MGG_01743T0 GeneID:2679181 KEGG:mgr:MGG_01743
Uniprot:G4MVB1
Length = 471
Score = 452 (164.2 bits), Expect = 7.8e-56, Sum P(2) = 7.8e-56
Identities = 92/205 (44%), Positives = 127/205 (61%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLI 63
VF T +VGYPE+MTDPSY QILV T PLIGNYGVP +++DE+ +LKYFES I +G++
Sbjct: 99 VFTTSLVGYPESMTDPSYRGQILVFTQPLIGNYGVPSKERDEYNLLKYFESPHIQCAGVV 158
Query: 64 VGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPLA 123
V D+ + SHW + L EW +P ++ VDTR + H+RE G +I G
Sbjct: 159 VSDIAEKYSHWTAVEGLNEWCAREGVPIISGVDTRAIVTHLREQGSSLARITIGQEYDAD 218
Query: 124 VTVEDLVFVDPNRGNLVDQVSTKE-VVTYNPTGSVHLCVVDCGLKYNQLRCLIQRGAKLS 182
ED FVDP NLV +VSTK V +P + H+ ++DCG+K N LR L+ RGA ++
Sbjct: 219 ---EDESFVDPGLINLVKRVSTKAPFVVESPDPTFHIGLIDCGVKENILRSLVSRGASVT 275
Query: 183 VIPWNHPI-KVPQGWQPLFTNANDG 206
V P+++PI KV + +F + G
Sbjct: 276 VFPYDYPIHKVASNFDGVFISNGPG 300
Score = 141 (54.7 bits), Expect = 7.8e-56, Sum P(2) = 7.8e-56
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 192 VPQGWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRDSKTR 251
+P + F N NDG+NEG++H++ P FS QFHPE GP D LFD ++ V+ K
Sbjct: 379 LPSEFIEYFVNLNDGSNEGMMHKTRPIFSTQFHPEAKGGPMDSSFLFDKYLANVKMFKNS 438
Query: 252 TPV 254
V
Sbjct: 439 EKV 441
Score = 42 (19.8 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 8/8 (100%), Positives = 8/8 (100%)
Query: 85 RAHNIPAL 92
RAHNIPAL
Sbjct: 349 RAHNIPAL 356
>FB|FBgn0003189 [details] [associations]
symbol:r "rudimentary" species:7227 "Drosophila melanogaster"
[GO:0006207 "'de novo' pyrimidine nucleobase biosynthetic process"
evidence=NAS;IMP] [GO:0004070 "aspartate carbamoyltransferase
activity" evidence=ISS;IDA;IMP] [GO:0004088 "carbamoyl-phosphate
synthase (glutamine-hydrolyzing) activity" evidence=IDA;IMP]
[GO:0004151 "dihydroorotase activity" evidence=ISS;IDA;IMP]
[GO:0006541 "glutamine metabolic process" evidence=IC;IMP]
[GO:0070406 "glutamine binding" evidence=IC] [GO:0005524 "ATP
binding" evidence=IEA;IC] [GO:0004087 "carbamoyl-phosphate synthase
(ammonia) activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0006543 "glutamine catabolic process"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0070409 "carbamoyl phosphate biosynthetic process"
evidence=IEA] [GO:0016597 "amino acid binding" evidence=IEA]
InterPro:IPR002082 InterPro:IPR002195 InterPro:IPR005479
InterPro:IPR005481 InterPro:IPR005483 InterPro:IPR006130
InterPro:IPR006131 InterPro:IPR006132 InterPro:IPR006274
InterPro:IPR006275 InterPro:IPR006680 InterPro:IPR011059
InterPro:IPR011761 InterPro:IPR013815 InterPro:IPR013816
Pfam:PF00185 Pfam:PF00289 Pfam:PF01979 Pfam:PF02729 Pfam:PF02786
PRINTS:PR00098 PRINTS:PR00100 PRINTS:PR00101 PROSITE:PS00097
PROSITE:PS00482 PROSITE:PS00483 PROSITE:PS00866 PROSITE:PS00867
PROSITE:PS50975 UniPathway:UPA00070 InterPro:IPR016185 Pfam:PF00117
Pfam:PF02787 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
EMBL:AE014298 GO:GO:0016597 Gene3D:3.30.1490.20 Gene3D:3.30.470.20
Gene3D:3.40.50.20 SUPFAM:SSF52440 SUPFAM:SSF51338 GO:GO:0006541
GO:GO:0004088 GO:GO:0044205 GO:GO:0070409 GO:GO:0006543
Gene3D:3.50.30.20 InterPro:IPR002474 InterPro:IPR017926
Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021 TIGRFAMs:TIGR01368
PROSITE:PS51273 GO:GO:0006207 eggNOG:COG0458 Gene3D:1.10.1030.10
Gene3D:3.40.50.1380 InterPro:IPR005480 InterPro:IPR011607
Pfam:PF02142 SMART:SM01096 SMART:SM00851 SUPFAM:SSF48108
SUPFAM:SSF52335 TIGRFAMs:TIGR01369 GeneTree:ENSGT00390000015604
SUPFAM:SSF53671 KO:K11540 OMA:QRPVHIC GO:GO:0004070 GO:GO:0004151
TIGRFAMs:TIGR00670 EMBL:X04813 EMBL:X03875 EMBL:X03876 EMBL:X03877
EMBL:X03878 EMBL:X03879 EMBL:BT046159 EMBL:M37783 EMBL:AY089560
EMBL:AF129814 EMBL:S74010 PIR:A29106 RefSeq:NP_523377.1
RefSeq:NP_996488.1 UniGene:Dm.4956 ProteinModelPortal:P05990
SMR:P05990 IntAct:P05990 MINT:MINT-889416 STRING:P05990
MEROPS:M38.972 PaxDb:P05990 PRIDE:P05990 EnsemblMetazoa:FBtr0089734
GeneID:32640 KEGG:dme:Dmel_CG18572 CTD:32640 FlyBase:FBgn0003189
InParanoid:P05990 OrthoDB:EOG4547DF PhylomeDB:P05990 ChiTaRS:R
GenomeRNAi:32640 NextBio:779598 Bgee:P05990 GermOnline:CG18572
Uniprot:P05990
Length = 2224
Score = 481 (174.4 bits), Expect = 8.9e-56, Sum P(2) = 8.9e-56
Identities = 99/210 (47%), Positives = 134/210 (63%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHR--IWISG 61
VFQTGMVGY EA+TD SY QILVLTYPLIGNYGVP D+DEHG+ +FE + + +
Sbjct: 39 VFQTGMVGYTEALTDRSYSGQILVLTYPLIGNYGVPAPDEDEHGLPLHFEWMKGVVQATA 98
Query: 62 LIVGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAP 121
L+VG++ + HW TL +WL+ H +P + ++DTR LTK +RE G + GKIV+ P
Sbjct: 99 LVVGEVAEEAFHWRKWKTLPDWLKQHKVPGIQDIDTRALTKKLREQGSMLGKIVYEK--P 156
Query: 122 LAVTVEDLVFVDPNRGNLVDQVSTKEVVTY-NPTGS-VHLCVVDCGLKYNQLRCLIQRGA 179
+ FVDPN NL + S KE Y NP G + ++DCGLK NQLRCL+QRGA
Sbjct: 157 PVEGLPKSSFVDPNVRNLAKECSVKERQVYGNPNGKGPRIAILDCGLKLNQLRCLLQRGA 216
Query: 180 KLSVIPWNHPIKVPQGWQPLFTNANDGTNE 209
++++PW+ ++ Q + LF + G E
Sbjct: 217 SVTLLPWSARLEDEQ-FDALFLSNGPGNPE 245
Score = 227 (85.0 bits), Expect = 4.8e-26, Sum P(2) = 4.8e-26
Identities = 45/94 (47%), Positives = 56/94 (59%)
Query: 165 GLKYNQLRCLIQRGAKLSVIPWNHPIKV-----PQGWQPLFTNANDGTNEGIVHESLPFF 219
G + + L CL + + + NH V P GW LF NANDGTNEGIVH S P+F
Sbjct: 289 GNRGHNLPCLHRATGRCLMTSQNHGYAVDLEQLPDGWSELFVNANDGTNEGIVHASKPYF 348
Query: 220 SVQFHPEHTAGPADLELLFDIFINAVRDSKTRTP 253
SVQFHPEH AGP D E LFD+F+ +++ P
Sbjct: 349 SVQFHPEHHAGPQDTEFLFDVFMESIQQKDLTIP 382
Score = 143 (55.4 bits), Expect = 8.9e-56, Sum P(2) = 8.9e-56
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 273 IAKSFQTPKKTSVRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDLAVKETV 332
IAK ++ + +VR R++ GIRP+ KQIDT+A E PA TNYLY TYN + HD+
Sbjct: 890 IAKYIKSTE-LAVRHQRQEFGIRPHVKQIDTVAGEWPASTNYLYHTYNGSEHDVDFPGGH 948
Query: 333 SIIKG 337
+I+ G
Sbjct: 949 TIVVG 953
>CGD|CAL0003663 [details] [associations]
symbol:CPA1 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005951 "carbamoyl-phosphate
synthase complex" evidence=IEA] [GO:0006526 "arginine biosynthetic
process" evidence=IEA] [GO:0070409 "carbamoyl phosphate
biosynthetic process" evidence=IEA] [GO:0006543 "glutamine
catabolic process" evidence=IEA] [GO:0004088 "carbamoyl-phosphate
synthase (glutamine-hydrolyzing) activity" evidence=IEA]
InterPro:IPR006274 UniPathway:UPA00068 CGD:CAL0003663 Pfam:PF00117
GO:GO:0005739 GO:GO:0005524 EMBL:AACQ01000005 EMBL:AACQ01000006
GO:GO:0006526 eggNOG:COG0505 KO:K01956 GO:GO:0004088 GO:GO:0070409
GO:GO:0006543 Gene3D:3.50.30.20 InterPro:IPR002474
InterPro:IPR017926 Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021
TIGRFAMs:TIGR01368 PROSITE:PS51273 RefSeq:XP_722702.1
RefSeq:XP_722848.1 HSSP:P0A6F1 ProteinModelPortal:Q5AML6
STRING:Q5AML6 GeneID:3635569 GeneID:3635715 KEGG:cal:CaO19.12100
KEGG:cal:CaO19.4630 Uniprot:Q5AML6
Length = 430
Score = 413 (150.4 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 88/209 (42%), Positives = 123/209 (58%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQD-KDEHGILKYFESHRIWISGL 62
VF T +VGYPE+MTDPSY QIL T PLIGNYGVP KD+ +LKY ES ++ G+
Sbjct: 63 VFTTSLVGYPESMTDPSYRGQILCFTQPLIGNYGVPSSTAKDQFNLLKYMESPKVQCIGI 122
Query: 63 IVGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPL 122
+V D SHW + +L +W + + A+ VDTR+L ++R+ G G+I G
Sbjct: 123 VVADAALEYSHWTAVESLQQWCKRSGVAAITGVDTRQLVSYLRDKGSSLGRITIGEEYDA 182
Query: 123 AVTVEDLVFVDPNRGNLVDQVSTKEV--VTYNPTGS--VHLCVVDCGLKYNQLRCLIQRG 178
ED F DP NLV +V+TK + P S +H+ V+DCG K N LRCL++RG
Sbjct: 183 D---EDAAFEDPGAINLVHKVTTKAPFHIACPPQYSKGIHIAVLDCGAKENILRCLVERG 239
Query: 179 AKLSVIPWNHPI-KVPQGWQPLFTNANDG 206
A L+V P+++PI K+ + +F + G
Sbjct: 240 ASLTVFPYDYPIDKIANKFDGIFISNGPG 268
Score = 177 (67.4 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 34/79 (43%), Positives = 47/79 (59%)
Query: 194 QGWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIF---INAVRDSKT 250
+ WQP FTN ND +NEG++H+ P FS QFHPE GP D LFD F IN + S
Sbjct: 350 ENWQPYFTNLNDLSNEGMIHKYQPIFSTQFHPEAKGGPLDTSFLFDKFFDNINVYKKSNG 409
Query: 251 RTPVPPIRKTIYDTLVPKD 269
+PP+ ++ ++PK+
Sbjct: 410 LN-LPPVENSLLVDILPKE 427
Score = 40 (19.1 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 7/8 (87%), Positives = 8/8 (100%)
Query: 85 RAHNIPAL 92
RAHNIPA+
Sbjct: 318 RAHNIPAI 325
>UNIPROTKB|Q5AML6 [details] [associations]
symbol:CPA1 "Carbamoyl-phosphate synthase arginine-specific
small chain" species:237561 "Candida albicans SC5314" [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR006274
UniPathway:UPA00068 CGD:CAL0003663 Pfam:PF00117 GO:GO:0005739
GO:GO:0005524 EMBL:AACQ01000005 EMBL:AACQ01000006 GO:GO:0006526
eggNOG:COG0505 KO:K01956 GO:GO:0004088 GO:GO:0070409 GO:GO:0006543
Gene3D:3.50.30.20 InterPro:IPR002474 InterPro:IPR017926
Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021 TIGRFAMs:TIGR01368
PROSITE:PS51273 RefSeq:XP_722702.1 RefSeq:XP_722848.1 HSSP:P0A6F1
ProteinModelPortal:Q5AML6 STRING:Q5AML6 GeneID:3635569
GeneID:3635715 KEGG:cal:CaO19.12100 KEGG:cal:CaO19.4630
Uniprot:Q5AML6
Length = 430
Score = 413 (150.4 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 88/209 (42%), Positives = 123/209 (58%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQD-KDEHGILKYFESHRIWISGL 62
VF T +VGYPE+MTDPSY QIL T PLIGNYGVP KD+ +LKY ES ++ G+
Sbjct: 63 VFTTSLVGYPESMTDPSYRGQILCFTQPLIGNYGVPSSTAKDQFNLLKYMESPKVQCIGI 122
Query: 63 IVGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPL 122
+V D SHW + +L +W + + A+ VDTR+L ++R+ G G+I G
Sbjct: 123 VVADAALEYSHWTAVESLQQWCKRSGVAAITGVDTRQLVSYLRDKGSSLGRITIGEEYDA 182
Query: 123 AVTVEDLVFVDPNRGNLVDQVSTKEV--VTYNPTGS--VHLCVVDCGLKYNQLRCLIQRG 178
ED F DP NLV +V+TK + P S +H+ V+DCG K N LRCL++RG
Sbjct: 183 D---EDAAFEDPGAINLVHKVTTKAPFHIACPPQYSKGIHIAVLDCGAKENILRCLVERG 239
Query: 179 AKLSVIPWNHPI-KVPQGWQPLFTNANDG 206
A L+V P+++PI K+ + +F + G
Sbjct: 240 ASLTVFPYDYPIDKIANKFDGIFISNGPG 268
Score = 177 (67.4 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 34/79 (43%), Positives = 47/79 (59%)
Query: 194 QGWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIF---INAVRDSKT 250
+ WQP FTN ND +NEG++H+ P FS QFHPE GP D LFD F IN + S
Sbjct: 350 ENWQPYFTNLNDLSNEGMIHKYQPIFSTQFHPEAKGGPLDTSFLFDKFFDNINVYKKSNG 409
Query: 251 RTPVPPIRKTIYDTLVPKD 269
+PP+ ++ ++PK+
Sbjct: 410 LN-LPPVENSLLVDILPKE 427
Score = 40 (19.1 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 7/8 (87%), Positives = 8/8 (100%)
Query: 85 RAHNIPAL 92
RAHNIPA+
Sbjct: 318 RAHNIPAI 325
>POMBASE|SPBC56F2.09c [details] [associations]
symbol:arg5 "arginine specific carbamoyl-phosphate
synthase subunit Arg5 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0000050 "urea cycle" evidence=IC]
[GO:0004088 "carbamoyl-phosphate synthase (glutamine-hydrolyzing)
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005951
"carbamoyl-phosphate synthase complex" evidence=ISO] [GO:0006526
"arginine biosynthetic process" evidence=ISO] [GO:0006543
"glutamine catabolic process" evidence=IEA] [GO:0070409 "carbamoyl
phosphate biosynthetic process" evidence=IEA] InterPro:IPR006274
UniPathway:UPA00068 Pfam:PF00117 PomBase:SPBC56F2.09c GO:GO:0005524
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006526 GO:GO:0000050
eggNOG:COG0505 HOGENOM:HOG000038087 KO:K01956 GO:GO:0004088
GO:GO:0070409 GO:GO:0006543 Gene3D:3.50.30.20 InterPro:IPR002474
InterPro:IPR017926 Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021
TIGRFAMs:TIGR01368 PROSITE:PS51273 HSSP:P0A6F1 GO:GO:0005951
OrthoDB:EOG4N8VDH PIR:T40535 RefSeq:NP_596708.1
ProteinModelPortal:O60060 STRING:O60060 PRIDE:O60060
EnsemblFungi:SPBC56F2.09c.1 GeneID:2541060 KEGG:spo:SPBC56F2.09c
OMA:TKERYEW NextBio:20802174 Uniprot:O60060
Length = 415
Score = 413 (150.4 bits), Expect = 5.4e-53, Sum P(2) = 5.4e-53
Identities = 89/210 (42%), Positives = 127/210 (60%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPP-QDKDEHGILKYFESHRIWISGL 62
VF T VGY E++TDPSY QQIL+ T PLIGNYGVP + +DE+G+L++FES I +G+
Sbjct: 72 VFTTSPVGYVESLTDPSYKQQILIFTQPLIGNYGVPDCKKRDENGLLRHFESPHIQCAGV 131
Query: 63 IVGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPL 122
+V D SHW + +LGEW + A+ VDTR + +RE G KI S+
Sbjct: 132 VVNDYATKYSHWTAVESLGEWCAREGVAAITGVDTRAIVTFLREQGSSLAKI---SIGEE 188
Query: 123 AVTVEDLVFVDPNRGNLVDQVSTKE-VVTYNPTGSVHLCVVDCGLKYNQLRCLIQRGAKL 181
+D F++P NLV QVST+E G +++ V+DCG+K N LR L+ RGA +
Sbjct: 189 YDANDDEAFINPEEVNLVSQVSTREPFFVSGGDGMLNIAVIDCGVKENILRSLVSRGASV 248
Query: 182 SVIPWNHPIK-VPQGWQPLF-TNA-NDGTN 208
+V P+++PI+ V + +F TN D T+
Sbjct: 249 TVFPFDYPIQNVASNYDGIFLTNGPGDPTH 278
Score = 153 (58.9 bits), Expect = 5.4e-53, Sum P(2) = 5.4e-53
Identities = 31/62 (50%), Positives = 39/62 (62%)
Query: 192 VPQGWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFIN-AVRDSKT 250
+P W+ +TN ND +NEGI H S P SVQFHPE GP D LFD +I A++ K+
Sbjct: 353 LPAEWKATWTNLNDQSNEGIAHVSRPISSVQFHPEARGGPMDTFYLFDNYIKEAIKYQKS 412
Query: 251 RT 252
RT
Sbjct: 413 RT 414
Score = 38 (18.4 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 85 RAHNIPAL 92
R HNIPAL
Sbjct: 323 RGHNIPAL 330
>DICTYBASE|DDB_G0276335 [details] [associations]
symbol:pyr1-3 "glutamine-dependent
carbamoyl-phosphate synthase" species:44689 "Dictyostelium
discoideum" [GO:0006541 "glutamine metabolic process" evidence=IDA]
[GO:0004151 "dihydroorotase activity" evidence=IEA;IDA] [GO:0004088
"carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity"
evidence=IEA;IDA] [GO:0004070 "aspartate carbamoyltransferase
activity" evidence=IEA;IDA] [GO:0070409 "carbamoyl phosphate
biosynthetic process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016812 "hydrolase activity, acting on
carbon-nitrogen (but not peptide) bonds, in cyclic amides"
evidence=IEA] [GO:0016810 "hydrolase activity, acting on
carbon-nitrogen (but not peptide) bonds" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016743 "carboxyl- or
carbamoyltransferase activity" evidence=IEA] [GO:0016597 "amino
acid binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0006807 "nitrogen compound metabolic process"
evidence=IEA] [GO:0006543 "glutamine catabolic process"
evidence=IEA] [GO:0006520 "cellular amino acid metabolic process"
evidence=IEA] [GO:0006207 "'de novo' pyrimidine nucleobase
biosynthetic process" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0006221 "pyrimidine
nucleotide biosynthetic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044205 "'de novo' UMP biosynthetic process"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR002082 InterPro:IPR002195 InterPro:IPR005479
InterPro:IPR005481 InterPro:IPR005483 InterPro:IPR006130
InterPro:IPR006131 InterPro:IPR006132 InterPro:IPR006274
InterPro:IPR006275 InterPro:IPR006680 InterPro:IPR011059
InterPro:IPR011761 InterPro:IPR013815 InterPro:IPR013816
Pfam:PF00185 Pfam:PF00289 Pfam:PF01979 Pfam:PF02729 Pfam:PF02786
PRINTS:PR00098 PRINTS:PR00100 PRINTS:PR00101 PROSITE:PS00097
PROSITE:PS00482 PROSITE:PS00483 PROSITE:PS00866 PROSITE:PS00867
PROSITE:PS50975 UniPathway:UPA00070 InterPro:IPR016185
dictyBase:DDB_G0276335 Pfam:PF00117 Pfam:PF02787 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 EMBL:AAFI02000014
GenomeReviews:CM000151_GR GO:GO:0016597 Gene3D:3.30.1490.20
Gene3D:3.30.470.20 Gene3D:3.40.50.20 SUPFAM:SSF52440
SUPFAM:SSF51338 GO:GO:0006541 GO:GO:0004088 GO:GO:0044205
GO:GO:0070409 GO:GO:0006543 Gene3D:3.50.30.20 InterPro:IPR002474
InterPro:IPR017926 Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021
TIGRFAMs:TIGR01368 PROSITE:PS51273 GO:GO:0006207 eggNOG:COG0458
Gene3D:1.10.1030.10 Gene3D:3.40.50.1380 InterPro:IPR005480
InterPro:IPR011607 Pfam:PF02142 SMART:SM01096 SMART:SM00851
SUPFAM:SSF48108 SUPFAM:SSF52335 TIGRFAMs:TIGR01369 SUPFAM:SSF53671
EMBL:X14633 EMBL:X14634 EMBL:X55433 PIR:S02800 PIR:S23738
RefSeq:XP_643196.1 ProteinModelPortal:P20054 STRING:P20054
PRIDE:P20054 EnsemblProtists:DDB0201646 GeneID:8620470
KEGG:ddi:DDB_G0276335 KO:K11540 OMA:QRPVHIC ProtClustDB:CLSZ2430906
GO:GO:0004070 GO:GO:0004151 TIGRFAMs:TIGR00670 Uniprot:P20054
Length = 2225
Score = 409 (149.0 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 87/199 (43%), Positives = 120/199 (60%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPP-QDKD-EHGILKYFESHRIWISG 61
VF TGMVGY E+++DPSY QILV ++PLIGNYGVP +++D E G+ FES + +
Sbjct: 35 VFSTGMVGYNESISDPSYTGQILVFSFPLIGNYGVPSFRERDPESGLAVNFESDKAHVQA 94
Query: 62 LIVGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAP 121
+I + CD SHW + +L EWL+ NIP L +DTR L IRE G + GK++ G
Sbjct: 95 IICSEYCDEYSHWAAEKSLSEWLKESNIPGLYGIDTRALITKIREKGSLKGKVIIGDFDE 154
Query: 122 LAVTVEDLVFVDPNRGNLVDQVSTKEVVTYNP------TGSVH----LCVVDCGLKYNQL 171
+ ED+ N NLV +VSTKE+ Y TG + V+DCG+K NQ+
Sbjct: 155 SKLEFEDI-----NLRNLVAEVSTKEIKEYKAAENNKKTGEKRKNKKVIVLDCGIKNNQI 209
Query: 172 RCLIQRGAKLSVIPWNHPI 190
RCL+ RG L V+PW++ +
Sbjct: 210 RCLLNRGVDLKVVPWDYDV 228
Score = 185 (70.2 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 55/163 (33%), Positives = 78/163 (47%)
Query: 172 RCLIQRGAKLSVIPWNHPIKVPQGWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGP 231
RC I VI N + GW+ F NAND +NEGI HES P+FSVQFHPE AGP
Sbjct: 310 RCHITSQNHGFVIDSNS-LPAGSGWKTYFINANDASNEGIYHESKPWFSVQFHPEAMAGP 368
Query: 232 ADLELLFDIFI-NAVRDSKTRTPVPPIR-----KTIYDTLVPKDEALI---AKSFQTPKK 282
D E LFD F+ N + + ++P+ + K I L+ L A F
Sbjct: 369 TDTEYLFDNFVDNVCGEQQHKSPMNKSKIIDCPKGINKVLILGSGGLSIGQAGEFDYSGS 428
Query: 283 TSVRKMREDNGIRPY--NKQIDTLAAEHPAQTNYLYLTYNATA 323
+++ ++E+ GI+ N I T+ +L NA++
Sbjct: 429 QAIKALKEE-GIKTILINPNIATVQTSPGLADKVYFLPVNASS 470
Score = 134 (52.2 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
Identities = 30/65 (46%), Positives = 40/65 (61%)
Query: 273 IAKSFQTPKKTSVRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDLAVKETV 332
IA++ T + +VR R+ GI P K IDT+AAE PAQ NYLY+TYN +D+ + E
Sbjct: 890 IARAVGTTE-LNVRDYRKKMGIIPCTKHIDTVAAEFPAQNNYLYMTYNGETNDVNINEKS 948
Query: 333 SIIKG 337
I G
Sbjct: 949 YITLG 953
>SGD|S000005829 [details] [associations]
symbol:CPA1 "Small subunit of carbamoyl phosphate synthetase"
species:4932 "Saccharomyces cerevisiae" [GO:0004088
"carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity"
evidence=IEA;IMP;IDA] [GO:0005951 "carbamoyl-phosphate synthase
complex" evidence=ISS;IDA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0070409 "carbamoyl phosphate biosynthetic
process" evidence=IEA] [GO:0006543 "glutamine catabolic process"
evidence=IEA] [GO:0006526 "arginine biosynthetic process"
evidence=IEA;IMP] [GO:0008652 "cellular amino acid biosynthetic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR006274 UniPathway:UPA00068
SGD:S000005829 Pfam:PF00117 GO:GO:0005524 EMBL:BK006948 EMBL:X01764
EMBL:M16690 GO:GO:0006526 eggNOG:COG0505 HOGENOM:HOG000038087
KO:K01956 OMA:RDSHYLF GO:GO:0004088 GO:GO:0070409 GO:GO:0006543
Gene3D:3.50.30.20 InterPro:IPR002474 InterPro:IPR017926
Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021 TIGRFAMs:TIGR01368
PROSITE:PS51273 GO:GO:0005951 OrthoDB:EOG4N8VDH EMBL:K02132
EMBL:Z75211 PIR:S67207 RefSeq:NP_014947.3 RefSeq:NP_014949.3
ProteinModelPortal:P07258 SMR:P07258 DIP:DIP-1024N IntAct:P07258
MINT:MINT-412445 STRING:P07258 PaxDb:P07258 PeptideAtlas:P07258
PRIDE:P07258 EnsemblFungi:YOR303W GeneID:854479 GeneID:854481
KEGG:sce:YOR303W KEGG:sce:YOR304C-A CYGD:YOR303w
GeneTree:ENSGT00700000105356 NextBio:976789 Genevestigator:P07258
GermOnline:YOR303W Uniprot:P07258
Length = 411
Score = 402 (146.6 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 85/211 (40%), Positives = 129/211 (61%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQD-KDEHGILKYFESHRIWISGL 62
VF T +VGYPE+MTDPSY QILV T PLIGNYGVP + +DE+ +LKYFES I + G+
Sbjct: 34 VFTTSLVGYPESMTDPSYRGQILVFTQPLIGNYGVPSGEARDEYNLLKYFESPHIHVVGI 93
Query: 63 IVGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPL 122
+V + SHW + +L +W + + A+ VDTR L +++RE G G+I P+
Sbjct: 94 VVAEYAYQYSHWTAVESLAQWCQREGVAAITGVDTRELVQYLREQGSSLGRITLADHDPV 153
Query: 123 AVTVEDLVFVDPNRGNLVDQVSTKEV--VTYNP-TGSVHLCVVDCGLKYNQLRCLIQRGA 179
+V+P + NLV QV+TK+ V+ P ++ ++DCG+K N +RCL++RGA
Sbjct: 154 P-------YVNPMKTNLVAQVTTKKPFHVSALPGKAKANVALIDCGVKENIIRCLVKRGA 206
Query: 180 KLSVIPWNHPIK-VPQGWQPLFTNANDGTNE 209
++V P+++ I+ V + +F + G E
Sbjct: 207 NVTVFPYDYRIQDVASEFDGIFLSNGPGNPE 237
Score = 150 (57.9 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 27/58 (46%), Positives = 36/58 (62%)
Query: 189 PIKVPQG-WQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAV 245
P +P+ W+P F N ND +NEG++H P FS QFHPE GP D +LFD F + +
Sbjct: 313 PETLPKDQWKPYFVNLNDKSNEGMIHLQRPIFSTQFHPEAKGGPLDTAILFDKFFDNI 370
Score = 40 (19.1 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 7/8 (87%), Positives = 8/8 (100%)
Query: 85 RAHNIPAL 92
RAHNIPA+
Sbjct: 286 RAHNIPAM 293
>GENEDB_PFALCIPARUM|PF13_0044 [details] [associations]
symbol:cpsSII "carbamoyl phosphate synthetase,
putative" species:5833 "Plasmodium falciparum" [GO:0004088
"carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity"
evidence=ISS] [GO:0006207 "'de novo' pyrimidine nucleobase
biosynthetic process" evidence=ISS] [GO:0006538 "glutamate
catabolic process" evidence=ISS] InterPro:IPR005479
InterPro:IPR005481 InterPro:IPR005483 InterPro:IPR011761
InterPro:IPR013816 Pfam:PF00289 Pfam:PF02786 PRINTS:PR00098
PROSITE:PS00866 PROSITE:PS00867 PROSITE:PS50975 InterPro:IPR016185
Pfam:PF00117 Pfam:PF02787 GO:GO:0005524 GO:GO:0046872
Gene3D:3.30.470.20 Gene3D:3.40.50.20 SUPFAM:SSF52440 GO:GO:0006538
EMBL:AL844509 GO:GO:0004088 Gene3D:3.50.30.20 InterPro:IPR002474
InterPro:IPR017926 Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021
PROSITE:PS51273 GO:GO:0006207 HSSP:P00968 HOGENOM:HOG000234583
Gene3D:1.10.1030.10 Gene3D:3.40.50.1380 InterPro:IPR005480
InterPro:IPR011607 Pfam:PF02142 SMART:SM01096 SMART:SM00851
SUPFAM:SSF48108 SUPFAM:SSF52335 GenomeReviews:AL844509_GR
RefSeq:XP_001349809.1 ProteinModelPortal:Q8IEN3 IntAct:Q8IEN3
MINT:MINT-1603468 PRIDE:Q8IEN3 EnsemblProtists:PF13_0044:mRNA
GeneID:814023 KEGG:pfa:PF13_0044 EuPathDB:PlasmoDB:PF3D7_1308200
KO:K01954 ProtClustDB:CLSZ2500716 Uniprot:Q8IEN3
Length = 2375
Score = 301 (111.0 bits), Expect = 2.8e-46, Sum P(4) = 2.8e-46
Identities = 58/113 (51%), Positives = 78/113 (69%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDE-HGILKYFESHRIWISGL 62
+F T MVGYPEA+TDPSY QILVLT+P IGNYG+ DE G+++ FES++I + GL
Sbjct: 94 IFNTAMVGYPEALTDPSYFGQILVLTFPSIGNYGIEKVKHDETFGLVQNFESNKIQVQGL 153
Query: 63 IVGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIV 115
++ + H+NS TL EWL+ + IP + +DTR LTK +RE G + GKIV
Sbjct: 154 VICEYSKQSYHYNSYITLSEWLKIYKIPCIGGIDTRALTKLLREKGSMLGKIV 206
Score = 123 (48.4 bits), Expect = 2.8e-46, Sum P(4) = 2.8e-46
Identities = 25/45 (55%), Positives = 30/45 (66%)
Query: 282 KTSVRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDL 326
+ V K RE G+ P+ K IDTL+AE PA TNYLYLTY HD+
Sbjct: 1191 ENDVMKYREKLGLFPHIKVIDTLSAEFPALTNYLYLTYQGQEHDV 1235
Score = 113 (44.8 bits), Expect = 2.8e-46, Sum P(4) = 2.8e-46
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 200 FTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRDSK 249
+ NAND + EGI H++ F+SVQFHPE GP D LF F+ + + K
Sbjct: 612 YINANDKSIEGISHKNGRFYSVQFHPEGNNGPEDTSFLFKNFLLDIFNKK 661
Score = 50 (22.7 bits), Expect = 2.8e-46, Sum P(4) = 2.8e-46
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 159 LCVVDCGLKYNQLRCLIQRGAKL 181
+ +VDCG+K + ++ LI+ G L
Sbjct: 474 IVIVDCGIKNSIIKNLIRHGMDL 496
>UNIPROTKB|Q8IEN3 [details] [associations]
symbol:cpsSII "Carbamoyl phosphate synthetase"
species:36329 "Plasmodium falciparum 3D7" [GO:0004088
"carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity"
evidence=ISS] [GO:0006207 "'de novo' pyrimidine nucleobase
biosynthetic process" evidence=ISS] [GO:0006538 "glutamate
catabolic process" evidence=ISS] InterPro:IPR005479
InterPro:IPR005481 InterPro:IPR005483 InterPro:IPR011761
InterPro:IPR013816 Pfam:PF00289 Pfam:PF02786 PRINTS:PR00098
PROSITE:PS00866 PROSITE:PS00867 PROSITE:PS50975 InterPro:IPR016185
Pfam:PF00117 Pfam:PF02787 GO:GO:0005524 GO:GO:0046872
Gene3D:3.30.470.20 Gene3D:3.40.50.20 SUPFAM:SSF52440 GO:GO:0006538
EMBL:AL844509 GO:GO:0004088 Gene3D:3.50.30.20 InterPro:IPR002474
InterPro:IPR017926 Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021
PROSITE:PS51273 GO:GO:0006207 HSSP:P00968 HOGENOM:HOG000234583
Gene3D:1.10.1030.10 Gene3D:3.40.50.1380 InterPro:IPR005480
InterPro:IPR011607 Pfam:PF02142 SMART:SM01096 SMART:SM00851
SUPFAM:SSF48108 SUPFAM:SSF52335 GenomeReviews:AL844509_GR
RefSeq:XP_001349809.1 ProteinModelPortal:Q8IEN3 IntAct:Q8IEN3
MINT:MINT-1603468 PRIDE:Q8IEN3 EnsemblProtists:PF13_0044:mRNA
GeneID:814023 KEGG:pfa:PF13_0044 EuPathDB:PlasmoDB:PF3D7_1308200
KO:K01954 ProtClustDB:CLSZ2500716 Uniprot:Q8IEN3
Length = 2375
Score = 301 (111.0 bits), Expect = 2.8e-46, Sum P(4) = 2.8e-46
Identities = 58/113 (51%), Positives = 78/113 (69%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDE-HGILKYFESHRIWISGL 62
+F T MVGYPEA+TDPSY QILVLT+P IGNYG+ DE G+++ FES++I + GL
Sbjct: 94 IFNTAMVGYPEALTDPSYFGQILVLTFPSIGNYGIEKVKHDETFGLVQNFESNKIQVQGL 153
Query: 63 IVGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIV 115
++ + H+NS TL EWL+ + IP + +DTR LTK +RE G + GKIV
Sbjct: 154 VICEYSKQSYHYNSYITLSEWLKIYKIPCIGGIDTRALTKLLREKGSMLGKIV 206
Score = 123 (48.4 bits), Expect = 2.8e-46, Sum P(4) = 2.8e-46
Identities = 25/45 (55%), Positives = 30/45 (66%)
Query: 282 KTSVRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDL 326
+ V K RE G+ P+ K IDTL+AE PA TNYLYLTY HD+
Sbjct: 1191 ENDVMKYREKLGLFPHIKVIDTLSAEFPALTNYLYLTYQGQEHDV 1235
Score = 113 (44.8 bits), Expect = 2.8e-46, Sum P(4) = 2.8e-46
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 200 FTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRDSK 249
+ NAND + EGI H++ F+SVQFHPE GP D LF F+ + + K
Sbjct: 612 YINANDKSIEGISHKNGRFYSVQFHPEGNNGPEDTSFLFKNFLLDIFNKK 661
Score = 50 (22.7 bits), Expect = 2.8e-46, Sum P(4) = 2.8e-46
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 159 LCVVDCGLKYNQLRCLIQRGAKL 181
+ +VDCG+K + ++ LI+ G L
Sbjct: 474 IVIVDCGIKNSIIKNLIRHGMDL 496
>TIGR_CMR|BA_4026 [details] [associations]
symbol:BA_4026 "carbamoyl-phosphate synthase, small
subunit" species:198094 "Bacillus anthracis str. Ames" [GO:0004088
"carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity"
evidence=ISS] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=ISS] HAMAP:MF_01209 InterPro:IPR006274
UniPathway:UPA00068 UniPathway:UPA00070 Pfam:PF00117 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006526
RefSeq:NP_846267.1 RefSeq:YP_020668.1 RefSeq:YP_029989.1
ProteinModelPortal:Q81WF1 MEROPS:C26.954 DNASU:1086653
EnsemblBacteria:EBBACT00000008201 EnsemblBacteria:EBBACT00000016646
EnsemblBacteria:EBBACT00000020118 GeneID:1086653 GeneID:2819581
GeneID:2852140 KEGG:ban:BA_4026 KEGG:bar:GBAA_4026 KEGG:bat:BAS3738
eggNOG:COG0505 HOGENOM:HOG000038087 KO:K01956 OMA:RDSHYLF
ProtClustDB:PRK12564 BioCyc:BANT260799:GJAJ-3796-MONOMER
BioCyc:BANT261594:GJ7F-3914-MONOMER GO:GO:0004088 GO:GO:0044205
GO:GO:0070409 GO:GO:0006543 Gene3D:3.50.30.20 InterPro:IPR002474
InterPro:IPR017926 Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021
TIGRFAMs:TIGR01368 PROSITE:PS51273 Uniprot:Q81WF1
Length = 365
Score = 310 (114.2 bits), Expect = 6.5e-39, Sum P(2) = 6.5e-39
Identities = 75/187 (40%), Positives = 112/187 (59%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLI 63
VF TGM GY E ++DPSY QI+ TYPLIGNYG+ ++D+ FES ++GLI
Sbjct: 29 VFTTGMTGYQETLSDPSYCGQIVTFTYPLIGNYGI---NRDD------FESIHPSVNGLI 79
Query: 64 VGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVH--GSVAP 121
V ++CD PS++ + +L ++L+ NIP LA +DTR+LT+ IR+ G + G++ + V
Sbjct: 80 VNEICDHPSNFRNEISLNDYLKERNIPGLAGIDTRKLTRKIRQYGTLRGRLCNMDADVEY 139
Query: 122 LAVTVEDLVFVDPNRGNLVDQVSTKEVVTYNPTGSVHLCV-VDCGLKYNQLRCLIQRGAK 180
+ ++ VF D V +VSTK+ Y G H V VD G+K+ LR L +R
Sbjct: 140 IVSQLKATVFTDH-----VKRVSTKD--PYPSPGRGHRVVLVDFGMKHGILRELNKRDCD 192
Query: 181 LSVIPWN 187
+ V+P+N
Sbjct: 193 VIVVPYN 199
Score = 122 (48.0 bits), Expect = 6.5e-39, Sum P(2) = 6.5e-39
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 204 NDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRDSK 249
NDGT EG+ H+ P F+VQ+HPE +AGP D LF+ F+ + + K
Sbjct: 310 NDGTVEGLRHKKFPAFTVQYHPEASAGPEDANDLFEDFLTMIENFK 355
>TIGR_CMR|CHY_1500 [details] [associations]
symbol:CHY_1500 "carbamoyl-phosphate synthase, small
subunit" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004088 "carbamoyl-phosphate synthase (glutamine-hydrolyzing)
activity" evidence=ISS] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=ISS] HAMAP:MF_01209
InterPro:IPR006274 UniPathway:UPA00068 UniPathway:UPA00070
Pfam:PF00117 GO:GO:0005524 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006526 eggNOG:COG0505 HOGENOM:HOG000038087 KO:K01956
GO:GO:0004088 GO:GO:0044205 GO:GO:0070409 GO:GO:0006543
Gene3D:3.50.30.20 InterPro:IPR002474 InterPro:IPR017926
Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021 TIGRFAMs:TIGR01368
PROSITE:PS51273 OMA:RATFTIR RefSeq:YP_360332.1
ProteinModelPortal:Q3AC02 STRING:Q3AC02 GeneID:3726959
KEGG:chy:CHY_1500 PATRIC:21276129
BioCyc:CHYD246194:GJCN-1499-MONOMER Uniprot:Q3AC02
Length = 362
Score = 309 (113.8 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
Identities = 75/183 (40%), Positives = 103/183 (56%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLI 63
VF TGM GY E +TDPSY QI+V+TYPLIGNYG P+DK E + ++ GL+
Sbjct: 30 VFNTGMTGYQEILTDPSYAGQIVVMTYPLIGNYGFIPEDK---------EREKSFVRGLV 80
Query: 64 VGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPLA 123
V ++CD PS+W L +L I LA VDTR +TK +R GV+ G I+ A
Sbjct: 81 VRELCDFPSNWRQKERLEHFLNEEKIVTLAGVDTREITKKLRLYGVMKG-IISAFPEKRA 139
Query: 124 VTVEDLVFVDPNRGN-LVDQVSTKEVVTYNPTGSVHLCVVDCGLKYNQLRCLIQRGAKLS 182
E + V G L QV+ EV+ Y P + +VD G K + L+ L++RGA++
Sbjct: 140 EYQEKVKLVPDISGQKLAYQVAGDEVLHY-PGQKPRVVLVDYGAKNSILQSLLKRGAEVF 198
Query: 183 VIP 185
V+P
Sbjct: 199 VVP 201
Score = 109 (43.4 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 195 GWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAV 245
G + F N ND T EG+ SVQFHPE GP D + +FD+F+ +
Sbjct: 305 GLEIWFRNLNDNTIEGLRSRYSKILSVQFHPEAAPGPNDADFIFDLFLEMI 355
>TIGR_CMR|DET_1201 [details] [associations]
symbol:DET_1201 "carbamoyl-phosphate synthase, small
subunit" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0004088 "carbamoyl-phosphate synthase (glutamine-hydrolyzing)
activity" evidence=ISS] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=ISS] HAMAP:MF_01209
InterPro:IPR006274 UniPathway:UPA00068 UniPathway:UPA00070
Pfam:PF00117 GO:GO:0005524 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0006526 eggNOG:COG0505 HOGENOM:HOG000038087 KO:K01956
ProtClustDB:PRK12564 GO:GO:0004088 GO:GO:0044205 GO:GO:0070409
GO:GO:0006543 Gene3D:3.50.30.20 InterPro:IPR002474
InterPro:IPR017926 Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021
TIGRFAMs:TIGR01368 PROSITE:PS51273 OMA:RATFTIR RefSeq:YP_181914.1
ProteinModelPortal:Q3Z785 STRING:Q3Z785 GeneID:3229506
KEGG:det:DET1201 PATRIC:21609437
BioCyc:DETH243164:GJNF-1202-MONOMER Uniprot:Q3Z785
Length = 364
Score = 268 (99.4 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 68/187 (36%), Positives = 98/187 (52%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLI 63
VF T M GY E +TDPSY QI+V TYPLIGNYGV P D ES I +
Sbjct: 31 VFNTSMNGYQEMLTDPSYTGQIIVPTYPLIGNYGVNPFDN---------ESACIRATAFG 81
Query: 64 VGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPLA 123
V + C P+H+ + T+ +L IP ++ +DTR +T+ +R GV+ G I A
Sbjct: 82 VHEECLLPNHYQNNQTIHSFLEESGIPGISGIDTRAITRKLRSAGVMRGMITTTKTPEEA 141
Query: 124 V-TVEDLVFVDPNRGNLVDQVSTKEVVTYN---PT-GSVHLCVVDCGLKYNQLRCLIQRG 178
+ T+ D + + V ++ST + P+ H+ V+DCGLKY+ L L G
Sbjct: 142 LKTIRSAP--DYGQIDFVRKISTPSAYEWQKEKPSFAGFHIAVLDCGLKYSILNQLKSHG 199
Query: 179 AKLSVIP 185
K++V+P
Sbjct: 200 CKVTVLP 206
Score = 130 (50.8 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 189 PIKVPQGWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRDS 248
P + +G + N NDGT EG+ H LP FS+Q+H E + GP D LF F+ ++ +
Sbjct: 303 PATLKEGLEVSHINLNDGTVEGLRHRELPVFSIQYHSEASPGPMDSTYLFKQFVEMIKQT 362
Query: 249 K 249
K
Sbjct: 363 K 363
>TIGR_CMR|CBU_1282 [details] [associations]
symbol:CBU_1282 "carbamoyl-phosphate synthase, small
subunit" species:227377 "Coxiella burnetii RSA 493" [GO:0004088
"carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity"
evidence=ISS] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=ISS] HAMAP:MF_01209 InterPro:IPR006274
UniPathway:UPA00068 UniPathway:UPA00070 Pfam:PF00117 GO:GO:0005524
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0006526
MEROPS:C26.954 HOGENOM:HOG000038087 KO:K01956 OMA:RDSHYLF
ProtClustDB:PRK12564 GO:GO:0004088 GO:GO:0044205 GO:GO:0070409
GO:GO:0006543 Gene3D:3.50.30.20 InterPro:IPR002474
InterPro:IPR017926 Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021
TIGRFAMs:TIGR01368 PROSITE:PS51273 RefSeq:NP_820275.2
ProteinModelPortal:Q83C49 GeneID:1209187 KEGG:cbu:CBU_1282
PATRIC:17931299 BioCyc:CBUR227377:GJ7S-1271-MONOMER Uniprot:Q83C49
Length = 402
Score = 264 (98.0 bits), Expect = 2.8e-32, Sum P(2) = 2.8e-32
Identities = 67/195 (34%), Positives = 101/195 (51%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLI 63
+F T + GY E +TDPSY +QI+ TYP IGN GV D+ ES RIW +GLI
Sbjct: 59 IFNTTLTGYQEILTDPSYAEQIITFTYPHIGNVGVNMDDQ---------ESRRIWAAGLI 109
Query: 64 VGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPLA 123
+ ++ S+W + L ++L++ I +A +DTRRL + IRE G + G IV G A
Sbjct: 110 IRELSPIVSNWRAQQALSDYLKSEEIIGIAGIDTRRLVRLIREKGALHGCIVAGDGAQAE 169
Query: 124 VTVEDLVFVDPNRG-NLVDQVSTKEVVTY-----NPTGSVH-------LCVVDCGLKYNQ 170
++ + +G +L VST T+ N + H + V D GLK
Sbjct: 170 QALKKARAYEGLKGKDLAKAVSTTRAQTWQERSWNQASAPHASSRAYQVVVYDFGLKQQI 229
Query: 171 LRCLIQRGAKLSVIP 185
LR L+ +G ++++P
Sbjct: 230 LRLLVDQGCLVTIVP 244
Score = 107 (42.7 bits), Expect = 2.8e-32, Sum P(2) = 2.8e-32
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 175 IQRGAKLSVIPWNHPIKVPQGWQPL---FTNAN--DGTNEGIVHESLPFFSVQFHPEHTA 229
++ G ++ + NH V + P T+ + DGT +GI H++ P + Q HPE +
Sbjct: 324 VETG-RVFITSQNHSFSVDENSLPATLRVTHRSLFDGTLQGIAHKTKPAIAFQGHPEASP 382
Query: 230 GPADLELLFDIFINAVRDS 248
GP D+ +F+ F+ +RDS
Sbjct: 383 GPHDMRRVFEEFVKLMRDS 401
>TIGR_CMR|GSU_1273 [details] [associations]
symbol:GSU_1273 "carbamoyl-phosphate synthase, small
subunit" species:243231 "Geobacter sulfurreducens PCA" [GO:0004088
"carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity"
evidence=ISS] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=ISS] HAMAP:MF_01209 InterPro:IPR006274
UniPathway:UPA00068 UniPathway:UPA00070 Pfam:PF00117 GO:GO:0005524
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0006526
HOGENOM:HOG000038087 KO:K01956 ProtClustDB:PRK12564 GO:GO:0004088
GO:GO:0044205 GO:GO:0070409 GO:GO:0006543 Gene3D:3.50.30.20
InterPro:IPR002474 InterPro:IPR017926 Pfam:PF00988 SMART:SM01097
SUPFAM:SSF52021 TIGRFAMs:TIGR01368 PROSITE:PS51273 OMA:TKERYEW
HSSP:P00907 RefSeq:NP_952326.1 ProteinModelPortal:Q74DP3 SMR:Q74DP3
GeneID:2686571 KEGG:gsu:GSU1273 PATRIC:22025317
BioCyc:GSUL243231:GH27-1226-MONOMER Uniprot:Q74DP3
Length = 374
Score = 249 (92.7 bits), Expect = 8.1e-32, Sum P(2) = 8.1e-32
Identities = 70/223 (31%), Positives = 109/223 (48%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLI 63
VF T M GY E +TDPSY Q++ +TY IGN G+ P+D ES ++++SG I
Sbjct: 29 VFNTAMTGYQEVLTDPSYRGQMVTMTYTQIGNTGINPED---------IESKQLYLSGFI 79
Query: 64 VGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIV-----HGS 118
V + D S+W + +L +L+ + + + +DTR LT+H+R+ G +G I H S
Sbjct: 80 VKEYHDCYSNWRATMSLDAYLKENGVVGIQGLDTRALTRHLRDKGAQNGVISTVDSDHES 139
Query: 119 VAPLAVTVEDLVFVDPNRGNLVDQVS--TKEV----VTYN---PTGSVHLCVV-DCGLKY 168
+ A V + +D G D+ T+++ Y P + V D G+KY
Sbjct: 140 LVKKARAVPSMAGLDLATGVSCDKPYHWTEKLWDLEAGYTAATPDELKYKVVAYDFGIKY 199
Query: 169 NQLRCLIQRGAKLSVIPWNHPIKVPQGWQP--LFTNANDGTNE 209
N LRCL+ G ++V+P P P +F + G E
Sbjct: 200 NILRCLVSAGCDVTVVPATFPADEALAMNPDGIFLSNGPGDPE 242
Score = 116 (45.9 bits), Expect = 8.1e-32, Sum P(2) = 8.1e-32
Identities = 23/48 (47%), Positives = 28/48 (58%)
Query: 202 NANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRDSK 249
N ND T EG+ H+ LP FSVQ HPE + GP D LF F+ + K
Sbjct: 326 NLNDQTVEGMKHKDLPIFSVQHHPEASPGPHDSHYLFGRFVELMEKEK 373
>UNIPROTKB|P0A6F1 [details] [associations]
symbol:carA species:83333 "Escherichia coli K-12"
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0004088
"carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity"
evidence=IEA;IMP] [GO:0006541 "glutamine metabolic process"
evidence=IEA;IMP] [GO:0006526 "arginine biosynthetic process"
evidence=IEA;IMP] [GO:0006207 "'de novo' pyrimidine nucleobase
biosynthetic process" evidence=IMP] [GO:0070409 "carbamoyl
phosphate biosynthetic process" evidence=IEA] [GO:0006543
"glutamine catabolic process" evidence=IEA] [GO:0044205 "'de novo'
UMP biosynthetic process" evidence=IEA] [GO:0005951
"carbamoyl-phosphate synthase complex" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006221 "pyrimidine nucleotide
biosynthetic process" evidence=IEA] HAMAP:MF_01209
InterPro:IPR006274 UniPathway:UPA00068 UniPathway:UPA00070
Pfam:PF00117 GO:GO:0005829 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006526
GO:GO:0006541 MEROPS:C26.954 eggNOG:COG0505 HOGENOM:HOG000038087
KO:K01956 OMA:RDSHYLF ProtClustDB:PRK12564 GO:GO:0004088
GO:GO:0044205 GO:GO:0070409 GO:GO:0006543 Gene3D:3.50.30.20
InterPro:IPR002474 InterPro:IPR017926 Pfam:PF00988 SMART:SM01097
SUPFAM:SSF52021 TIGRFAMs:TIGR01368 PROSITE:PS51273 EMBL:J01597
EMBL:X70017 PIR:A01128 PIR:B85484 RefSeq:NP_414573.1
RefSeq:YP_488338.1 PDB:1A9X PDB:1BXR PDB:1C30 PDB:1C3O PDB:1CE8
PDB:1CS0 PDB:1JDB PDB:1KEE PDB:1M6V PDB:1T36 PDBsum:1A9X
PDBsum:1BXR PDBsum:1C30 PDBsum:1C3O PDBsum:1CE8 PDBsum:1CS0
PDBsum:1JDB PDBsum:1KEE PDBsum:1M6V PDBsum:1T36
ProteinModelPortal:P0A6F1 SMR:P0A6F1 DIP:DIP-35412N IntAct:P0A6F1
SWISS-2DPAGE:P0A6F1 PaxDb:P0A6F1 PRIDE:P0A6F1
EnsemblBacteria:EBESCT00000002116 EnsemblBacteria:EBESCT00000002117
EnsemblBacteria:EBESCT00000016355 GeneID:12934451 GeneID:949025
KEGG:ecj:Y75_p0032 KEGG:eco:b0032 PATRIC:32115157 EchoBASE:EB0132
EcoGene:EG10134 BioCyc:EcoCyc:CARBPSYN-SMALL
BioCyc:ECOL316407:JW0030-MONOMER BioCyc:MetaCyc:CARBPSYN-SMALL
SABIO-RK:P0A6F1 EvolutionaryTrace:P0A6F1 Genevestigator:P0A6F1
GO:GO:0005951 GO:GO:0006207 Uniprot:P0A6F1
Length = 382
Score = 242 (90.2 bits), Expect = 2.3e-31, Sum P(3) = 2.3e-31
Identities = 57/149 (38%), Positives = 85/149 (57%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLI 63
VF T M GY E +TDPSY +QI+ LTYP IGN G D DE ES ++ GL+
Sbjct: 31 VFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGT--NDADE-------ESSQVHAQGLV 81
Query: 64 VGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPLA 123
+ D+ S++ + L +L+ HNI A+A++DTR+LT+ +RE G +G I+ G A
Sbjct: 82 IRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAA 141
Query: 124 VTVEDL-VFVDPNRGNLVDQVSTKEVVTY 151
+ +E F N +L +V+T E ++
Sbjct: 142 LALEKARAFPGLNGMDLAKEVTTAEAYSW 170
Score = 91 (37.1 bits), Expect = 2.3e-31, Sum P(3) = 2.3e-31
Identities = 20/41 (48%), Positives = 23/41 (56%)
Query: 205 DGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAV 245
DGT +GI P FS Q HPE + GP D LFD FI +
Sbjct: 334 DGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELI 374
Score = 68 (29.0 bits), Expect = 2.3e-31, Sum P(3) = 2.3e-31
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 158 HLCVVDCGLKYNQLRCLIQRGAKLSVIP 185
H+ D G K N LR L+ RG +L+++P
Sbjct: 193 HVVAYDFGAKRNILRMLVDRGCRLTIVP 220
>UNIPROTKB|P71811 [details] [associations]
symbol:carA "Carbamoyl-phosphate synthase small chain"
species:1773 "Mycobacterium tuberculosis" [GO:0040007 "growth"
evidence=IMP] HAMAP:MF_01209 InterPro:IPR006274 UniPathway:UPA00068
UniPathway:UPA00070 Pfam:PF00117 GO:GO:0005524 GO:GO:0040007
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842576 GO:GO:0006526 eggNOG:COG0505 HOGENOM:HOG000038087
KO:K01956 OMA:RDSHYLF ProtClustDB:PRK12564 GO:GO:0004088
GO:GO:0044205 GO:GO:0070409 GO:GO:0006543 Gene3D:3.50.30.20
InterPro:IPR002474 InterPro:IPR017926 Pfam:PF00988 SMART:SM01097
SUPFAM:SSF52021 TIGRFAMs:TIGR01368 PROSITE:PS51273 PIR:D70959
RefSeq:NP_215899.1 RefSeq:NP_335878.1 RefSeq:YP_006514763.1
ProteinModelPortal:P71811 SMR:P71811 PRIDE:P71811
EnsemblBacteria:EBMYCT00000002477 EnsemblBacteria:EBMYCT00000070163
GeneID:13319972 GeneID:886761 GeneID:924557 KEGG:mtc:MT1427
KEGG:mtu:Rv1383 KEGG:mtv:RVBD_1383 PATRIC:18124908
TubercuList:Rv1383 Uniprot:P71811
Length = 376
Score = 251 (93.4 bits), Expect = 5.3e-31, Sum P(2) = 5.3e-31
Identities = 65/189 (34%), Positives = 94/189 (49%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLI 63
VF TGM GY E +TDPSYH+QI+V T P IGN G +D + G RIW++G
Sbjct: 30 VFSTGMSGYQETLTDPSYHRQIVVATAPQIGNTGWNGEDSESRG-------ERIWVAGYA 82
Query: 64 VGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVV-SGKIVHGSVAPL 122
V D S+W + TL + L I +A +DTR + +H+R G + +G G++A
Sbjct: 83 VRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVRHLRSRGSMKAGVFSDGALAEP 142
Query: 123 AVTVEDLVFVDPNRG-NLVDQVSTKEVVTYNPTGS-----VHLCVVDCGLKYNQLRCLIQ 176
A + + G +L +VST E P G + +D G+K N R +
Sbjct: 143 ADLIARVRAQQSMLGADLAGEVSTAEPYVVEPDGPPGVSRFTVAALDLGIKTNTPRNFAR 202
Query: 177 RGAKLSVIP 185
RG + V+P
Sbjct: 203 RGIRCHVLP 211
Score = 106 (42.4 bits), Expect = 5.3e-31, Sum P(2) = 5.3e-31
Identities = 23/42 (54%), Positives = 26/42 (61%)
Query: 201 TNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFI 242
T ANDG EG+ FSVQ+HPE AGP D E LFD F+
Sbjct: 327 TCANDGVVEGVKLVDGRAFSVQYHPEAAAGPHDAEYLFDQFV 368
>UNIPROTKB|I3LLT2 [details] [associations]
symbol:CAD "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019899 "enzyme binding" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016812
"hydrolase activity, acting on carbon-nitrogen (but not peptide)
bonds, in cyclic amides" evidence=IEA] [GO:0006807 "nitrogen
compound metabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002195 InterPro:IPR005479
InterPro:IPR005481 InterPro:IPR005483 InterPro:IPR006680
InterPro:IPR011059 InterPro:IPR011761 InterPro:IPR013816
Pfam:PF00289 Pfam:PF01979 Pfam:PF02786 PRINTS:PR00098
PROSITE:PS00482 PROSITE:PS00866 PROSITE:PS00867 PROSITE:PS50975
InterPro:IPR016185 Pfam:PF00117 Pfam:PF02787 GO:GO:0005829
GO:GO:0005524 GO:GO:0046872 Gene3D:3.30.470.20 Gene3D:3.40.50.20
SUPFAM:SSF52440 SUPFAM:SSF51338 GO:GO:0016363 GO:GO:0006807
Gene3D:3.50.30.20 InterPro:IPR002474 InterPro:IPR017926
PROSITE:PS51273 Gene3D:1.10.1030.10 InterPro:IPR005480
SMART:SM01096 SUPFAM:SSF48108 GeneTree:ENSGT00390000015604
GO:GO:0016812 Ensembl:ENSSSCT00000024601 OMA:NANDATN Uniprot:I3LLT2
Length = 1699
Score = 243 (90.6 bits), Expect = 2.9e-30, Sum P(2) = 2.9e-30
Identities = 48/91 (52%), Positives = 60/91 (65%)
Query: 168 YNQLRCLIQRGAKLSVIPWNHPIKV-----PQGWQPLFTNANDGTNEGIVHESLPFFSVQ 222
+NQ CL+ + + NH V P W PLFTNAND +NEG VH+SLPFFSVQ
Sbjct: 161 HNQ-PCLLVGSGRCFLTSQNHGFAVETDSLPASWLPLFTNANDRSNEGSVHDSLPFFSVQ 219
Query: 223 FHPEHTAGPADLELLFDIFINAVRDSKTRTP 253
FHPEH AGP+D+ELLFDIF+ V+++ P
Sbjct: 220 FHPEHQAGPSDMELLFDIFLETVKEATAGNP 250
Score = 229 (85.7 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 48/106 (45%), Positives = 65/106 (61%)
Query: 92 LANVDTRRLTKHIRECGVVSGKIVHGSVAPLAVTVEDLVFVDPNRGNLVDQVSTKEVVTY 151
L VDTR LTK +RE G + GK+V P L F+DPN LV +VS K +
Sbjct: 1 LTGVDTRELTKKLREQGSLLGKLVQDGTEP-----STLPFLDPNARPLVPEVSVKVPRVF 55
Query: 152 NPTGSVHLCVVDCGLKYNQLRCLIQRGAKLSVIPWNHPI--KVPQG 195
N G+ + +DCGLKYNQ+RCL +RGA+++V+PW+H + K P G
Sbjct: 56 NAGGAPRILALDCGLKYNQIRCLCRRGAEVTVVPWDHALAAKSPXG 101
Score = 153 (58.9 bits), Expect = 2.9e-30, Sum P(2) = 2.9e-30
Identities = 37/85 (43%), Positives = 49/85 (57%)
Query: 253 PVPPIRKTIYDTLVPKDEALIAKSFQTPKKTSVRKMREDNGIRPYNKQIDTLAAEHPAQT 312
P+PP L D+ + T + +VRK+R++ GI P KQIDT+AAE PAQT
Sbjct: 696 PLPPDLLQQAKRLGFSDKQIALAVLST--ELAVRKLRQELGICPAVKQIDTVAAEWPAQT 753
Query: 313 NYLYLTYNATAHDLAVKETVSIIKG 337
NYLYLTY T HDL + ++ G
Sbjct: 754 NYLYLTYWGTTHDLTFRTPHVLVLG 778
>UNIPROTKB|Q9KPH8 [details] [associations]
symbol:carA "Carbamoyl-phosphate synthase small chain"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004088 "carbamoyl-phosphate synthase (glutamine-hydrolyzing)
activity" evidence=ISS] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=ISS] HAMAP:MF_01209
InterPro:IPR006274 UniPathway:UPA00068 UniPathway:UPA00070
Pfam:PF00117 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0006526 MEROPS:C26.954 eggNOG:COG0505 KO:K01956 OMA:RDSHYLF
ProtClustDB:PRK12564 GO:GO:0004088 GO:GO:0044205 GO:GO:0070409
GO:GO:0006543 Gene3D:3.50.30.20 InterPro:IPR002474
InterPro:IPR017926 Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021
TIGRFAMs:TIGR01368 PROSITE:PS51273 PIR:E82083 RefSeq:NP_232020.1
ProteinModelPortal:Q9KPH8 SMR:Q9KPH8 PRIDE:Q9KPH8 DNASU:2613059
GeneID:2613059 KEGG:vch:VC2390 PATRIC:20083803 GO:GO:0009220
Uniprot:Q9KPH8
Length = 379
Score = 254 (94.5 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 70/199 (35%), Positives = 102/199 (51%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLI 63
VF T M GY E +TDPSY QQI+ LTYP IGN G +D+ ES I GL+
Sbjct: 31 VFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNTGTNSEDE---------ESTAIHAQGLV 81
Query: 64 VGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPLA 123
+ D+ S++ S +L ++L++ NI +A++DTR+LT+ +RE G +G I+ G A
Sbjct: 82 IRDLPLIASNFRSEQSLSDYLKSQNIVGIADIDTRKLTRILREKGAQNGCIMAGDNLDEA 141
Query: 124 VTVEDLVFVDPNRG-NLVDQVSTKEVVTYN----------PTGSV------HLCVVDCGL 166
+ + +G +L VSTKE + P H+ D G
Sbjct: 142 LALAKAKEFPGLKGMDLAKVVSTKEAYAWKQGSWTLEGGLPEAKADSELPYHVVAYDFGA 201
Query: 167 KYNQLRCLIQRGAKLSVIP 185
K N LR L+ RG +L+V+P
Sbjct: 202 KRNILRMLVDRGCRLTVVP 220
Score = 89 (36.4 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 205 DGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVR 246
DG+ +GI P FS Q HPE + GP D LFD FI ++
Sbjct: 334 DGSLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIK 375
>TIGR_CMR|VC_2390 [details] [associations]
symbol:VC_2390 "carbamoyl-phosphate synthase, small
subunit" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004088
"carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity"
evidence=ISS] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=ISS] HAMAP:MF_01209 InterPro:IPR006274
UniPathway:UPA00068 UniPathway:UPA00070 Pfam:PF00117 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006526
MEROPS:C26.954 eggNOG:COG0505 KO:K01956 OMA:RDSHYLF
ProtClustDB:PRK12564 GO:GO:0004088 GO:GO:0044205 GO:GO:0070409
GO:GO:0006543 Gene3D:3.50.30.20 InterPro:IPR002474
InterPro:IPR017926 Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021
TIGRFAMs:TIGR01368 PROSITE:PS51273 PIR:E82083 RefSeq:NP_232020.1
ProteinModelPortal:Q9KPH8 SMR:Q9KPH8 PRIDE:Q9KPH8 DNASU:2613059
GeneID:2613059 KEGG:vch:VC2390 PATRIC:20083803 GO:GO:0009220
Uniprot:Q9KPH8
Length = 379
Score = 254 (94.5 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 70/199 (35%), Positives = 102/199 (51%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLI 63
VF T M GY E +TDPSY QQI+ LTYP IGN G +D+ ES I GL+
Sbjct: 31 VFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNTGTNSEDE---------ESTAIHAQGLV 81
Query: 64 VGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPLA 123
+ D+ S++ S +L ++L++ NI +A++DTR+LT+ +RE G +G I+ G A
Sbjct: 82 IRDLPLIASNFRSEQSLSDYLKSQNIVGIADIDTRKLTRILREKGAQNGCIMAGDNLDEA 141
Query: 124 VTVEDLVFVDPNRG-NLVDQVSTKEVVTYN----------PTGSV------HLCVVDCGL 166
+ + +G +L VSTKE + P H+ D G
Sbjct: 142 LALAKAKEFPGLKGMDLAKVVSTKEAYAWKQGSWTLEGGLPEAKADSELPYHVVAYDFGA 201
Query: 167 KYNQLRCLIQRGAKLSVIP 185
K N LR L+ RG +L+V+P
Sbjct: 202 KRNILRMLVDRGCRLTVVP 220
Score = 89 (36.4 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 205 DGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVR 246
DG+ +GI P FS Q HPE + GP D LFD FI ++
Sbjct: 334 DGSLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIK 375
>TIGR_CMR|CPS_3459 [details] [associations]
symbol:CPS_3459 "carbamoyl-phosphate synthase, small
subunit" species:167879 "Colwellia psychrerythraea 34H" [GO:0004088
"carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity"
evidence=ISS] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=ISS] HAMAP:MF_01209 InterPro:IPR006274
UniPathway:UPA00068 UniPathway:UPA00070 Pfam:PF00117 GO:GO:0005524
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0006526
eggNOG:COG0505 HOGENOM:HOG000038087 KO:K01956 OMA:RDSHYLF
ProtClustDB:PRK12564 GO:GO:0004088 GO:GO:0044205 GO:GO:0070409
GO:GO:0006543 Gene3D:3.50.30.20 InterPro:IPR002474
InterPro:IPR017926 Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021
TIGRFAMs:TIGR01368 PROSITE:PS51273 RefSeq:YP_270133.1
ProteinModelPortal:Q47YI7 SMR:Q47YI7 STRING:Q47YI7 GeneID:3519280
KEGG:cps:CPS_3459 PATRIC:21469865
BioCyc:CPSY167879:GI48-3487-MONOMER Uniprot:Q47YI7
Length = 383
Score = 255 (94.8 bits), Expect = 2.8e-29, Sum P(2) = 2.8e-29
Identities = 74/204 (36%), Positives = 103/204 (50%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLI 63
VF T M GY E +TDPSY +QI+ LTYP IGN G +DK ES+ I GL+
Sbjct: 31 VFNTSMTGYQEILTDPSYAEQIITLTYPHIGNTGTNSEDK---------ESNSIVAKGLV 81
Query: 64 VGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIV---HGSVA 120
+ D+ S++ + L ++L AHNI +A++DTR+LT+ +RE G +G I+ S
Sbjct: 82 IRDLPLLASNFRNEQNLSDYLIAHNILGIADIDTRKLTRILREKGAQNGCILTLDDSSDE 141
Query: 121 PLAVTVEDLVFVDPN-RG-NLVDQVSTKEVVTYN------------PTG-SVHLCVVDCG 165
L P +G +L VSTKE + P H+ D G
Sbjct: 142 SLQADALTQAKAFPGLKGMDLAKVVSTKEQYQWTDGSWELGKGFTKPDNLEFHVVAYDFG 201
Query: 166 LKYNQLRCLIQRGAKLSVIPWNHP 189
K+N LR L+ RG KL+V+P P
Sbjct: 202 AKHNILRMLVDRGCKLTVVPAQTP 225
Score = 86 (35.3 bits), Expect = 2.8e-29, Sum P(2) = 2.8e-29
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 205 DGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRDSKT 250
D + +GI P FS Q HPE + GP D LFD FI+ ++ K+
Sbjct: 335 DDSLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIDLIKTYKS 380
>TIGR_CMR|SO_1141 [details] [associations]
symbol:SO_1141 "carbamoyl-phosphate synthase, small
subunit" species:211586 "Shewanella oneidensis MR-1" [GO:0004088
"carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity"
evidence=ISS] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=ISS] HAMAP:MF_01209 InterPro:IPR006274
UniPathway:UPA00068 UniPathway:UPA00070 Pfam:PF00117 GO:GO:0005524
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0006526
eggNOG:COG0505 HOGENOM:HOG000038087 KO:K01956 OMA:RDSHYLF
ProtClustDB:PRK12564 GO:GO:0004088 GO:GO:0044205 GO:GO:0070409
GO:GO:0006543 Gene3D:3.50.30.20 InterPro:IPR002474
InterPro:IPR017926 Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021
TIGRFAMs:TIGR01368 PROSITE:PS51273 RefSeq:NP_716766.1
ProteinModelPortal:Q8EHS6 SMR:Q8EHS6 GeneID:1168971
KEGG:son:SO_1141 PATRIC:23521924 Uniprot:Q8EHS6
Length = 386
Score = 231 (86.4 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 65/203 (32%), Positives = 104/203 (51%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLI 63
VF T M GY E +TDPSY +QI+ LTYP IGN G +D + +G+ H GLI
Sbjct: 35 VFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNTGTNNEDVESNGV------HAC---GLI 85
Query: 64 VGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGS-VAPL 122
+ D+ S + + L ++L+A+N+ +A++DTR+LT+ +RE G +G I+ G+ + +
Sbjct: 86 IRDLPLIASSFRNQQNLSDYLKANNVVGIADIDTRKLTRILREKGAQAGCIMAGADLDEV 145
Query: 123 AVTVEDLVFVDPNRGNLVDQVSTKEVVTYN--------------PTGSVHLCVV--DCGL 166
F +L +V+T + + P ++ VV D G+
Sbjct: 146 KALAAAKAFPGLKGMDLAKEVTTDKAYPWRKGSWRLVGGLPADTPAEALKYKVVAYDYGV 205
Query: 167 KYNQLRCLIQRGAKLSVIPWNHP 189
K N LR L+ RG ++V+P P
Sbjct: 206 KQNILRMLVDRGCDVTVVPAKTP 228
Score = 84 (34.6 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 205 DGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAV 245
DG+ +GI P FS Q HPE + GP D LFD FI +
Sbjct: 338 DGSLQGIHLTDKPAFSFQGHPEASPGPNDAAPLFDHFIELI 378
>TAIR|locus:2089149 [details] [associations]
symbol:CARA "AT3G27740" species:3702 "Arabidopsis
thaliana" [GO:0004088 "carbamoyl-phosphate synthase
(glutamine-hydrolyzing) activity" evidence=ISS;IDA] [GO:0006543
"glutamine catabolic process" evidence=IEA] [GO:0070409 "carbamoyl
phosphate biosynthetic process" evidence=IEA] [GO:0016036 "cellular
response to phosphate starvation" evidence=IEP] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA] [GO:0005951
"carbamoyl-phosphate synthase complex" evidence=IDA] [GO:0001510
"RNA methylation" evidence=RCA] [GO:0006164 "purine nucleotide
biosynthetic process" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA] HAMAP:MF_01209
InterPro:IPR006274 Pfam:PF00117 GO:GO:0009570 EMBL:CP002686
GO:GO:0016036 EMBL:AB018114 HOGENOM:HOG000038087 KO:K01956
GO:GO:0004088 GO:GO:0070409 GO:GO:0006543 Gene3D:3.50.30.20
InterPro:IPR002474 InterPro:IPR017926 Pfam:PF00988 SMART:SM01097
SUPFAM:SSF52021 TIGRFAMs:TIGR01368 PROSITE:PS51273 GO:GO:0005951
OMA:RATFTIR EMBL:AY046004 EMBL:AY079315 IPI:IPI00537790
RefSeq:NP_566824.1 UniGene:At.8030 HSSP:P00907
ProteinModelPortal:Q9LVW7 SMR:Q9LVW7 IntAct:Q9LVW7 STRING:Q9LVW7
MEROPS:C26.A04 PRIDE:Q9LVW7 EnsemblPlants:AT3G27740.1 GeneID:822396
KEGG:ath:AT3G27740 TAIR:At3g27740 InParanoid:Q9LVW7
PhylomeDB:Q9LVW7 ProtClustDB:PLN02771 ArrayExpress:Q9LVW7
Genevestigator:Q9LVW7 Uniprot:Q9LVW7
Length = 430
Score = 202 (76.2 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 64/216 (29%), Positives = 108/216 (50%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLI 63
VF T + GY E +TDPSY Q +++T P IGN GV P D+ ES + +++GL+
Sbjct: 84 VFNTSLTGYQEILTDPSYAGQFVLMTNPQIGNTGVNPDDE---------ESGQCFLTGLV 134
Query: 64 VGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKI-VHGSVAP- 121
+ ++ + S+W TL ++L +I + ++DTR +T+ +RE G + G + S
Sbjct: 135 IRNLSISTSNWRCTKTLADYLTERDIMGVYDLDTRAITRRLREDGSLIGVLSTEQSKTDD 194
Query: 122 --LAVTVE-DLVFVD-------PNRGNLVDQVSTK-EVVTYNPTG-SVHLCVVDCGLKYN 169
L ++ D+V +D + VD+ + + + T + G S + D G+K N
Sbjct: 195 ELLQMSRSWDIVGIDLISDVSCKSPYEWVDKTNAEWDFNTNSRDGKSYKVIAYDFGIKQN 254
Query: 170 QLRCLIQRGAKLSVIPWNHPIKVPQGWQP---LFTN 202
LR L G +++V+P P P LF+N
Sbjct: 255 ILRRLSSYGCQITVVPSTFPAAEALKMNPDGILFSN 290
Score = 100 (40.3 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 189 PIKVPQGWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRDS 248
P +P G + N NDG+ G+ + S+Q+HPE + GP D + F FI ++ S
Sbjct: 367 PASLPGGVEVTHVNLNDGSCAGLSFPEMNVMSLQYHPEASPGPHDSDNAFREFIELMKRS 426
Query: 249 K 249
K
Sbjct: 427 K 427
>TIGR_CMR|SPO_1377 [details] [associations]
symbol:SPO_1377 "carbamoyl-phosphate synthase, small
subunit" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004088
"carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity"
evidence=ISS] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=ISS] HAMAP:MF_01209 InterPro:IPR006274
UniPathway:UPA00068 UniPathway:UPA00070 Pfam:PF00117 GO:GO:0005524
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006526
eggNOG:COG0505 HOGENOM:HOG000038087 KO:K01956 OMA:RDSHYLF
ProtClustDB:PRK12564 GO:GO:0004088 GO:GO:0044205 GO:GO:0070409
GO:GO:0006543 Gene3D:3.50.30.20 InterPro:IPR002474
InterPro:IPR017926 Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021
TIGRFAMs:TIGR01368 PROSITE:PS51273 HSSP:P0A6F1 RefSeq:YP_166619.1
ProteinModelPortal:Q5LTN6 SMR:Q5LTN6 GeneID:3193092
KEGG:sil:SPO1377 PATRIC:23376073 Uniprot:Q5LTN6
Length = 388
Score = 197 (74.4 bits), Expect = 3.7e-20, Sum P(2) = 3.7e-20
Identities = 65/197 (32%), Positives = 89/197 (45%)
Query: 5 FQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLIV 64
F T M GY E MTDPSY QI+ T+P IGN GV P+D DE + + +G++V
Sbjct: 38 FNTAMTGYQEIMTDPSYAGQIVTFTFPHIGNVGVTPED-DE-------TTDPV-AAGMVV 88
Query: 65 GDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVH---GSVAP 121
S+W +A L WL A+ VDTRRLT+ IR+ G + H G
Sbjct: 89 KWDPTAASNWRAAEELKGWLARRGRIAIGGVDTRRLTRAIRQQGAPHVALAHDPEGKFDL 148
Query: 122 LAVTVEDLVFVDPNRGNLVDQVSTKEVVTYN------PTGSV------HLCV-VDCGLKY 168
A+ F +L V+ + ++ P G H V +D G K
Sbjct: 149 AALIAAARGFAGLEGMDLAKDVTCAQSYRWDEMRWAWPEGYARQEAPKHKVVAIDYGAKR 208
Query: 169 NQLRCLIQRGAKLSVIP 185
N LRCL G ++V+P
Sbjct: 209 NILRCLASSGCDVTVLP 225
Score = 101 (40.6 bits), Expect = 3.7e-20, Sum P(2) = 3.7e-20
Identities = 27/75 (36%), Positives = 36/75 (48%)
Query: 180 KLSVIPWNHPIKV-----PQGWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADL 234
K+ + NH V P+G + DG+N GI P FSVQ+HPE + GP D
Sbjct: 311 KVEITSMNHGFAVDAQSLPEGVVETHRSLFDGSNCGIRMSERPVFSVQYHPEASPGPQDS 370
Query: 235 ELLFDIFINAVRDSK 249
LF+ F A+ K
Sbjct: 371 FYLFERFAAAMDAQK 385
>TIGR_CMR|ECH_0503 [details] [associations]
symbol:ECH_0503 "carbamoyl-phosphate synthase, small
subunit" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0004088 "carbamoyl-phosphate synthase (glutamine-hydrolyzing)
activity" evidence=ISS] [GO:0005951 "carbamoyl-phosphate synthase
complex" evidence=ISS] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=ISS] HAMAP:MF_01209
InterPro:IPR006274 UniPathway:UPA00068 UniPathway:UPA00070
Pfam:PF00117 GO:GO:0005524 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0006526 eggNOG:COG0505 HOGENOM:HOG000038087 KO:K01956
ProtClustDB:PRK12564 GO:GO:0004088 GO:GO:0044205 GO:GO:0070409
GO:GO:0006543 Gene3D:3.50.30.20 InterPro:IPR002474
InterPro:IPR017926 Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021
TIGRFAMs:TIGR01368 PROSITE:PS51273 RefSeq:YP_507318.1
ProteinModelPortal:Q2GGW5 STRING:Q2GGW5 GeneID:3927146
KEGG:ech:ECH_0503 PATRIC:20576478 OMA:DITIFPY
BioCyc:ECHA205920:GJNR-505-MONOMER Uniprot:Q2GGW5
Length = 371
Score = 190 (71.9 bits), Expect = 7.0e-20, Sum P(2) = 7.0e-20
Identities = 58/188 (30%), Positives = 93/188 (49%)
Query: 5 FQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLIV 64
F T M GY +TDPS+ QI+ T+P IGN G+ +D FE +I G+IV
Sbjct: 37 FTTSMTGYQHTITDPSFAGQIITFTFPHIGNVGINYKD---------FEDRKILTHGIIV 87
Query: 65 GDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPLAV 124
+ + SH +S S L W+ +N+ ++ +DTR LT H+R+ G +G I H ++
Sbjct: 88 KTISED-SHSSSYSNLELWMIENNLTGISEIDTRALTCHLRQHGSQNGIIYHFDNIN-SI 145
Query: 125 TVEDLVFVDPNRGNLVDQVSTKEVVT-YNPTGS----VHLCVVDCGLKYNQLRCLIQRGA 179
+ L ++ N D S+ V YN T ++ V++ G+K + L L +
Sbjct: 146 NLAKLQ-KKASQYNYRDHCSSISFVNNYNSTDDDTLLYNIVVINFGIKLSILDALSKLRC 204
Query: 180 KLSVIPWN 187
K+ +I N
Sbjct: 205 KIHMISGN 212
Score = 106 (42.4 bits), Expect = 7.0e-20, Sum P(2) = 7.0e-20
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 192 VPQGWQPLFTNANDGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRDS 248
+P Q + D T EGI P SVQ+HPE + GP D +F+ FIN +R++
Sbjct: 314 LPTNVQVTHRSLFDNTIEGIQVNDYPIISVQYHPEGSPGPNDASYIFNHFINLIREN 370
>TIGR_CMR|APH_0381 [details] [associations]
symbol:APH_0381 "carbamoyl-phosphate synthase, small
subunit" species:212042 "Anaplasma phagocytophilum HZ" [GO:0004088
"carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity"
evidence=ISS] [GO:0005951 "carbamoyl-phosphate synthase complex"
evidence=ISS] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=ISS] HAMAP:MF_01209 InterPro:IPR006274
UniPathway:UPA00068 UniPathway:UPA00070 Pfam:PF00117 GO:GO:0005524
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0006526
eggNOG:COG0505 HOGENOM:HOG000038087 KO:K01956 OMA:RDSHYLF
ProtClustDB:PRK12564 GO:GO:0004088 GO:GO:0044205 GO:GO:0070409
GO:GO:0006543 Gene3D:3.50.30.20 InterPro:IPR002474
InterPro:IPR017926 Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021
TIGRFAMs:TIGR01368 PROSITE:PS51273 RefSeq:YP_504987.1
ProteinModelPortal:Q2GKW4 STRING:Q2GKW4 GeneID:3930752
KEGG:aph:APH_0381 PATRIC:20949368
BioCyc:APHA212042:GHPM-409-MONOMER Uniprot:Q2GKW4
Length = 365
Score = 200 (75.5 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 54/181 (29%), Positives = 91/181 (50%)
Query: 5 FQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLIV 64
F TG+ GY +TDPS+ QI+ T+P IGN G+ +D FE ++ G++V
Sbjct: 35 FTTGVTGYQYTITDPSFAGQIVTFTFPHIGNVGINSKD---------FECEQVLAKGIVV 85
Query: 65 GDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPLAV 124
++ SH +S L W+ +N ++ VDTR L H+RE G + G I H AV
Sbjct: 86 REISGA-SHVSSHIDLNSWIEQNNFTGISGVDTRALAIHLRENGTLGGVIHHFDDIG-AV 143
Query: 125 TVEDLVFVD-PNRGNLVDQVSTKEVVTYNPTGSVHLCVVDCGLKYNQLRCLIQRGAKLSV 183
+++L V ++ +L ++ +++ G +CV+D G K+ L + G + V
Sbjct: 144 HIQELQNVARTHKKSLATELPHLMDHSHHVDGH-SVCVIDFGAKHGIFSALTRIGCAVHV 202
Query: 184 I 184
+
Sbjct: 203 V 203
Score = 86 (35.3 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 205 DGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAV 245
DGT EGI + P SVQ+HPE GP D +F F + +
Sbjct: 320 DGTVEGIKMTNRPVLSVQYHPEGCPGPNDSHYIFRKFADLI 360
>TIGR_CMR|CJE_1667 [details] [associations]
symbol:CJE_1667 "carbamoyl-phosphate synthase, small
subunit" species:195099 "Campylobacter jejuni RM1221" [GO:0004088
"carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity"
evidence=ISS] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=ISS] HAMAP:MF_01209 InterPro:IPR006274
UniPathway:UPA00068 UniPathway:UPA00070 Pfam:PF00117 GO:GO:0005524
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0006526
eggNOG:COG0505 HOGENOM:HOG000038087 KO:K01956 ProtClustDB:PRK12564
GO:GO:0004088 GO:GO:0044205 GO:GO:0070409 GO:GO:0006543
Gene3D:3.50.30.20 InterPro:IPR002474 InterPro:IPR017926
Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021 TIGRFAMs:TIGR01368
PROSITE:PS51273 OMA:DITIFPY RefSeq:YP_179648.1
ProteinModelPortal:Q5HST7 STRING:Q5HST7 GeneID:3232295
KEGG:cjr:CJE1667 PATRIC:20045129
BioCyc:CJEJ195099:GJC0-1697-MONOMER Uniprot:Q5HST7
Length = 372
Score = 167 (63.8 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 58/202 (28%), Positives = 97/202 (48%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLI 63
VF T + GY E ++DPSY Q +V + P IG G D ES I+ SG++
Sbjct: 29 VFNTSLTGYQEIISDPSYAGQFIVFSMPEIGIVGTNENDN---------ESKEIFASGVL 79
Query: 64 VGDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECG----VVSGKIVHGSV 119
+ ++ + S++ + +L ++L H + +DTR L K IR G V+S +I +
Sbjct: 80 MRELSSSFSNFRAKESLQDYLEKHGKIGIYELDTRYLVKMIRNNGNLRAVISTEI--SNK 137
Query: 120 APLAVTVEDLVFVDPNRGNLVDQVSTKEVVTY-----NPT---------GSVHLCVVDCG 165
L + +E +D N V +VSTK+ ++ N + + V+D G
Sbjct: 138 EDLKIALEKSAKID--EVNFVKEVSTKKNYSHKQGVWNASFQKFNDAKRSEKKVAVIDYG 195
Query: 166 LKYNQLRCLIQRGAKLSVIPWN 187
+K N L L++ G ++ V P+N
Sbjct: 196 VKTNILNELVEVGFEVEVYPYN 217
Score = 90 (36.7 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 187 NHPIKVPQGWQPL--FTNAN-DGTN-EGIVHESLPFFSVQFHPEHTAGPADLELLFDIFI 242
NH VP+ + T+ N G N EG+ ++ P SVQ HPE ++GP + + +F F+
Sbjct: 310 NHNYNVPEELAQVAHITHRNLFGDNVEGVRYKDYPIISVQHHPESSSGPHESKYIFKEFM 369
Query: 243 N 243
N
Sbjct: 370 N 370
>UNIPROTKB|E7EWJ3 [details] [associations]
symbol:CPS1 "Carbamoyl-phosphate synthase [ammonia],
mitochondrial" species:9606 "Homo sapiens" [GO:0000050 "urea cycle"
evidence=IEA] [GO:0004087 "carbamoyl-phosphate synthase (ammonia)
activity" evidence=IEA] [GO:0004175 "endopeptidase activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007494 "midgut development" evidence=IEA]
[GO:0009636 "response to toxic substance" evidence=IEA] [GO:0010043
"response to zinc ion" evidence=IEA] [GO:0014075 "response to amine
stimulus" evidence=IEA] [GO:0016595 "glutamate binding"
evidence=IEA] [GO:0032094 "response to food" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0032496
"response to lipopolysaccharide" evidence=IEA] [GO:0042493
"response to drug" evidence=IEA] [GO:0042594 "response to
starvation" evidence=IEA] [GO:0043200 "response to amino acid
stimulus" evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0044344 "cellular response to fibroblast growth factor
stimulus" evidence=IEA] [GO:0055081 "anion homeostasis"
evidence=IEA] [GO:0060416 "response to growth hormone stimulus"
evidence=IEA] [GO:0070365 "hepatocyte differentiation"
evidence=IEA] [GO:0071320 "cellular response to cAMP" evidence=IEA]
[GO:0071377 "cellular response to glucagon stimulus" evidence=IEA]
[GO:0071400 "cellular response to oleic acid" evidence=IEA]
[GO:0071548 "response to dexamethasone stimulus" evidence=IEA]
GO:GO:0005524 GO:GO:0043234 GO:GO:0005743 GO:GO:0071320
GO:GO:0044344 GO:GO:0042493 GO:GO:0005543 GO:GO:0010043
GO:GO:0032496 GO:GO:0005509 GO:GO:0042594 GO:GO:0007494
GO:GO:0055081 GO:GO:0071400 GO:GO:0004175 GO:GO:0032094
GO:GO:0071377 GO:GO:0043200 GO:GO:0070365 GO:GO:0000050
GO:GO:0014075 GO:GO:0060416 GO:GO:0071548 Gene3D:3.50.30.20
InterPro:IPR002474 Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021
GO:GO:0004087 EMBL:AC008172 HGNC:HGNC:2323 ChiTaRS:CPS1
GO:GO:0016595 EMBL:AC007970 IPI:IPI00926199
ProteinModelPortal:E7EWJ3 SMR:E7EWJ3 Ensembl:ENST00000523702
ArrayExpress:E7EWJ3 Bgee:E7EWJ3 Uniprot:E7EWJ3
Length = 157
Score = 192 (72.6 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 39/80 (48%), Positives = 52/80 (65%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDK-DEHGILKYFESHRIWISGL 62
VF TG+ GYPEA+TDP+Y QIL + P+IGN G P DE G+ KY ES+ I +SGL
Sbjct: 78 VFNTGLGGYPEAITDPAYKGQILTMANPIIGNGGAPDTTALDELGLSKYLESNGIKVSGL 137
Query: 63 IVGDMCDTPSHWNSASTLGE 82
+V D +HW + +LG+
Sbjct: 138 LVLDYSKDYNHWLATKSLGQ 157
>TIGR_CMR|NSE_0502 [details] [associations]
symbol:NSE_0502 "carbamoyl-phosphate synthase, small
subunit" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0004088 "carbamoyl-phosphate synthase (glutamine-hydrolyzing)
activity" evidence=ISS] [GO:0005951 "carbamoyl-phosphate synthase
complex" evidence=ISS] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=ISS] HAMAP:MF_01209
InterPro:IPR006274 UniPathway:UPA00068 UniPathway:UPA00070
Pfam:PF00117 GO:GO:0005524 GO:GO:0006526 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0505 HOGENOM:HOG000038087
KO:K01956 GO:GO:0004088 GO:GO:0044205 GO:GO:0070409 GO:GO:0006543
Gene3D:3.50.30.20 InterPro:IPR002474 InterPro:IPR017926
Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021 TIGRFAMs:TIGR01368
PROSITE:PS51273 OMA:RATFTIR MEROPS:C26.A04 RefSeq:YP_506386.1
ProteinModelPortal:Q2GDR0 STRING:Q2GDR0 GeneID:3931583
KEGG:nse:NSE_0502 PATRIC:22681053 ProtClustDB:CLSK2528150
BioCyc:NSEN222891:GHFU-522-MONOMER Uniprot:Q2GDR0
Length = 365
Score = 151 (58.2 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 52/175 (29%), Positives = 76/175 (43%)
Query: 5 FQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDKDEHGILKYFESHRIWISGLIV 64
F TGM GY +TDPS+ QI++ +P IGN + D ES RI+ GL+
Sbjct: 32 FTTGMTGYQHTITDPSFSGQIILFAFPHIGNVAINSCDN---------ESSRIFARGLVF 82
Query: 65 GDMCDTPSHWNSASTLGEWLRAHNIPALANVDTRRLTKHIRECGVVSGKIVHGSVAPLAV 124
+ H + WL +N+ A+ VDTR +T+ +R G G I V +++
Sbjct: 83 REGPQDFLHHLRMRSFSSWLEDNNVTAIYGVDTRAITRLVRLKGNQGGIIF--PVNDISI 140
Query: 125 TVEDLVF---VDPNRGNLVDQVSTKEVVTYNPTGSVH--LCVVDCGLKYNQLRCL 174
L+ D N L S + G +CVVD G+K +R L
Sbjct: 141 DEAILLLRETEDMNGNELATSASGNARCSPCCVGDKRKKVCVVDFGIKDGIVRNL 195
Score = 91 (37.1 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 205 DGTNEGIVHESLPFFSVQFHPEHTAGPADLELLFDIFINAV 245
DG+ EGI + FSVQ+HPE + GP D +F F N +
Sbjct: 322 DGSVEGIKIKDRKIFSVQYHPEGSPGPHDSHYIFSKFFNEI 362
>UNIPROTKB|C9JTA4 [details] [associations]
symbol:CPS1 "Carbamoyl-phosphate synthase [ammonia],
mitochondrial" species:9606 "Homo sapiens" [GO:0010043 "response to
zinc ion" evidence=IEA] [GO:0014075 "response to amine stimulus"
evidence=IEA] [GO:0016595 "glutamate binding" evidence=IEA]
[GO:0032094 "response to food" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0032496 "response to
lipopolysaccharide" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042594 "response to starvation" evidence=IEA]
[GO:0043200 "response to amino acid stimulus" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044344 "cellular
response to fibroblast growth factor stimulus" evidence=IEA]
[GO:0055081 "anion homeostasis" evidence=IEA] [GO:0060416 "response
to growth hormone stimulus" evidence=IEA] [GO:0070365 "hepatocyte
differentiation" evidence=IEA] [GO:0071320 "cellular response to
cAMP" evidence=IEA] [GO:0071377 "cellular response to glucagon
stimulus" evidence=IEA] [GO:0071400 "cellular response to oleic
acid" evidence=IEA] [GO:0071548 "response to dexamethasone
stimulus" evidence=IEA] [GO:0000050 "urea cycle" evidence=IEA]
[GO:0004087 "carbamoyl-phosphate synthase (ammonia) activity"
evidence=IEA] [GO:0004175 "endopeptidase activity" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007494 "midgut development" evidence=IEA]
[GO:0009636 "response to toxic substance" evidence=IEA]
GO:GO:0005524 GO:GO:0043234 GO:GO:0005743 GO:GO:0071320
GO:GO:0044344 GO:GO:0042493 GO:GO:0005543 GO:GO:0010043
GO:GO:0032496 GO:GO:0005509 GO:GO:0042594 GO:GO:0007494
GO:GO:0055081 GO:GO:0071400 GO:GO:0004175 GO:GO:0032094
GO:GO:0071377 GO:GO:0043200 GO:GO:0070365 GO:GO:0000050
GO:GO:0014075 GO:GO:0060416 GO:GO:0071548 Gene3D:3.50.30.20
InterPro:IPR002474 Pfam:PF00988 SMART:SM01097 SUPFAM:SSF52021
GO:GO:0004087 EMBL:AC008172 HGNC:HGNC:2323 ChiTaRS:CPS1
GO:GO:0016595 EMBL:AC007970 IPI:IPI01014091 SMR:C9JTA4
STRING:C9JTA4 Ensembl:ENST00000417946 Ensembl:ENST00000518043
Uniprot:C9JTA4
Length = 121
Score = 134 (52.2 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 27/49 (55%), Positives = 33/49 (67%)
Query: 4 VFQTGMVGYPEAMTDPSYHQQILVLTYPLIGNYGVPPQDK-DEHGILKY 51
VF TG+ GYPEA+TDP+Y QIL + P+IGN G P DE G+ KY
Sbjct: 72 VFNTGLGGYPEAITDPAYKGQILTMANPIIGNGGAPDTTALDELGLSKY 120
>ASPGD|ASPL0000006265 [details] [associations]
symbol:AN5999 species:162425 "Emericella nidulans"
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=RCA] [GO:0004070 "aspartate carbamoyltransferase activity"
evidence=RCA] [GO:0004088 "carbamoyl-phosphate synthase
(glutamine-hydrolyzing) activity" evidence=RCA] [GO:0006525
"arginine metabolic process" evidence=RCA] [GO:0097308 "cellular
response to farnesol" evidence=IEP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR005479 InterPro:IPR005481 InterPro:IPR005483
InterPro:IPR006275 InterPro:IPR011761 InterPro:IPR013815
InterPro:IPR013816 Pfam:PF00289 Pfam:PF02786 PRINTS:PR00098
PROSITE:PS00866 PROSITE:PS00867 PROSITE:PS50975 InterPro:IPR016185
Pfam:PF02787 GO:GO:0005524 GO:GO:0003824 GO:GO:0046872
EMBL:BN001301 Gene3D:3.30.1490.20 Gene3D:3.30.470.20
Gene3D:3.40.50.20 SUPFAM:SSF52440 GO:GO:0006807 EMBL:AACD01000102
GO:GO:0005951 eggNOG:COG0458 HOGENOM:HOG000234583 KO:K01955
Gene3D:1.10.1030.10 InterPro:IPR005480 InterPro:IPR011607
SMART:SM01096 SUPFAM:SSF48108 SUPFAM:SSF52335 TIGRFAMs:TIGR01369
OrthoDB:EOG4T7CBC OMA:SSPTAYM RefSeq:XP_663603.1
ProteinModelPortal:Q5B0D1 STRING:Q5B0D1
EnsemblFungi:CADANIAT00007019 GeneID:2871108 KEGG:ani:AN5999.2
Uniprot:Q5B0D1
Length = 1173
Score = 157 (60.3 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 32/53 (60%), Positives = 39/53 (73%)
Query: 285 VRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDLAVKETVSIIKG 337
VR R+ GIRP+ K+IDTLAAE PA TNYLY TYNAT+HD+ + +II G
Sbjct: 594 VRARRKGFGIRPWVKKIDTLAAEFPADTNYLYTTYNATSHDVTFDDHGTIILG 646
>SGD|S000003870 [details] [associations]
symbol:CPA2 "Large subunit of carbamoyl phosphate synthetase"
species:4932 "Saccharomyces cerevisiae" [GO:0006807 "nitrogen
compound metabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0006526 "arginine biosynthetic process" evidence=IEA;IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0004088
"carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity"
evidence=IEA;IMP;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005951 "carbamoyl-phosphate synthase complex" evidence=IDA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0008652 "cellular
amino acid biosynthetic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] InterPro:IPR005479 InterPro:IPR005481
InterPro:IPR005483 InterPro:IPR006275 InterPro:IPR011761
InterPro:IPR013815 InterPro:IPR013816 Pfam:PF00289 Pfam:PF02786
PRINTS:PR00098 PROSITE:PS00866 PROSITE:PS00867 PROSITE:PS50975
UniPathway:UPA00068 InterPro:IPR016185 SGD:S000003870 Pfam:PF02787
GO:GO:0005524 EMBL:BK006943 GO:GO:0046872 Gene3D:3.30.1490.20
Gene3D:3.30.470.20 Gene3D:3.40.50.20 SUPFAM:SSF52440 GO:GO:0006526
GO:GO:0004088 GO:GO:0005951 eggNOG:COG0458 HOGENOM:HOG000234583
KO:K01955 Gene3D:1.10.1030.10 Gene3D:3.40.50.1380
InterPro:IPR005480 InterPro:IPR011607 Pfam:PF02142 SMART:SM01096
SUPFAM:SSF48108 SUPFAM:SSF52335 TIGRFAMs:TIGR01369
OrthoDB:EOG4T7CBC EMBL:K01178 EMBL:Z49609 PIR:A01199
RefSeq:NP_012643.3 RefSeq:NP_012646.3 ProteinModelPortal:P03965
SMR:P03965 DIP:DIP-1023N IntAct:P03965 MINT:MINT-639311
STRING:P03965 PaxDb:P03965 PeptideAtlas:P03965 PRIDE:P03965
EnsemblFungi:YJR109C GeneID:853573 GeneID:853576 KEGG:sce:YJR109C
KEGG:sce:YJR112W CYGD:YJR109c GeneTree:ENSGT00390000015604
KO:K11562 OMA:SSPTAYM NextBio:974349 Genevestigator:P03965
GermOnline:YJR109C Uniprot:P03965
Length = 1118
Score = 149 (57.5 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 29/53 (54%), Positives = 38/53 (71%)
Query: 285 VRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDLAVKETVSIIKG 337
+R +R+ GI P+ K+IDTLAAE PAQTNYLY TYNAT +D+ E ++ G
Sbjct: 533 IRSLRKTLGIIPFVKRIDTLAAEFPAQTNYLYTTYNATKNDVEFNENGMLVLG 585
>CGD|CAL0003247 [details] [associations]
symbol:CPA2 species:5476 "Candida albicans" [GO:0005951
"carbamoyl-phosphate synthase complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0004088 "carbamoyl-phosphate
synthase (glutamine-hydrolyzing) activity" evidence=IEA]
[GO:0006807 "nitrogen compound metabolic process" evidence=IEA]
[GO:0006526 "arginine biosynthetic process" evidence=IEA]
InterPro:IPR005479 InterPro:IPR005481 InterPro:IPR005483
InterPro:IPR006275 InterPro:IPR011761 InterPro:IPR013815
InterPro:IPR013816 Pfam:PF00289 Pfam:PF02786 PRINTS:PR00098
PROSITE:PS00866 PROSITE:PS00867 PROSITE:PS50975 InterPro:IPR016185
CGD:CAL0003247 Pfam:PF02787 GO:GO:0005524 GO:GO:0003824
GO:GO:0046872 Gene3D:3.30.1490.20 Gene3D:3.30.470.20
Gene3D:3.40.50.20 SUPFAM:SSF52440 GO:GO:0006807 EMBL:AACQ01000049
EMBL:AACQ01000048 eggNOG:COG0458 HOGENOM:HOG000234583 KO:K01955
Gene3D:1.10.1030.10 InterPro:IPR005480 InterPro:IPR011607
SMART:SM01096 SUPFAM:SSF48108 SUPFAM:SSF52335 TIGRFAMs:TIGR01369
RefSeq:XP_717847.1 RefSeq:XP_717912.1 ProteinModelPortal:Q5A8A6
STRING:Q5A8A6 GeneID:3640385 GeneID:3640443 KEGG:cal:CaO19.10732
KEGG:cal:CaO19.3221 Uniprot:Q5A8A6
Length = 1149
Score = 146 (56.5 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 28/53 (52%), Positives = 40/53 (75%)
Query: 285 VRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDLAVKETVSIIKG 337
VR++R++ GI P+ K+IDTLAAE PA TNYLY TYNAT+ D+ + +++ G
Sbjct: 558 VRRVRKELGIIPFVKKIDTLAAEFPANTNYLYTTYNATSSDIDFNDKGTMVLG 610
>POMBASE|SPBC215.08c [details] [associations]
symbol:arg4 "arginine specific carbamoyl-phosphate
synthase Arg4 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0000050 "urea cycle" evidence=IC] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005951
"carbamoyl-phosphate synthase complex" evidence=ISO] [GO:0006526
"arginine biosynthetic process" evidence=ISO] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0004088 "carbamoyl-phosphate
synthase (glutamine-hydrolyzing) activity" evidence=ISO]
InterPro:IPR005479 InterPro:IPR005481 InterPro:IPR005483
InterPro:IPR006275 InterPro:IPR011761 InterPro:IPR013815
InterPro:IPR013816 Pfam:PF00289 Pfam:PF02786 PRINTS:PR00098
PROSITE:PS00866 PROSITE:PS00867 PROSITE:PS50975 UniPathway:UPA00068
InterPro:IPR016185 PomBase:SPBC215.08c Pfam:PF02787 GO:GO:0005739
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GenomeReviews:CU329671_GR
Gene3D:3.30.1490.20 Gene3D:3.30.470.20 Gene3D:3.40.50.20
SUPFAM:SSF52440 GO:GO:0006526 GO:GO:0000050 GO:GO:0004088
GO:GO:0005951 eggNOG:COG0458 HOGENOM:HOG000234583 KO:K01955
Gene3D:1.10.1030.10 InterPro:IPR005480 InterPro:IPR011607
SMART:SM01096 SUPFAM:SSF48108 SUPFAM:SSF52335 TIGRFAMs:TIGR01369
OMA:SEFFEIV PIR:T39898 RefSeq:NP_596685.1 ProteinModelPortal:O94313
DIP:DIP-59124N STRING:O94313 EnsemblFungi:SPBC215.08c.1
GeneID:2540729 KEGG:spo:SPBC215.08c OrthoDB:EOG4T7CBC
NextBio:20801851 Uniprot:O94313
Length = 1160
Score = 134 (52.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 285 VRKMREDNGIRPYNKQIDTLAAEHPAQTNYLYLTYNATAHDLAVKETVSIIKG 337
VR R+ + P+ K+IDTLAAE PA TNYLY +YNA++HD+ E +++ G
Sbjct: 583 VRARRKRLDVHPWVKKIDTLAAEFPAHTNYLYTSYNASSHDIDFNEHGTMVLG 635
>UNIPROTKB|I3LIW0 [details] [associations]
symbol:I3LIW0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0006807
"nitrogen compound metabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] InterPro:IPR005479 InterPro:IPR005481
InterPro:IPR005483 InterPro:IPR011761 InterPro:IPR013816
Pfam:PF00289 Pfam:PF02786 PRINTS:PR00098 PROSITE:PS00866
PROSITE:PS50975 InterPro:IPR016185 Pfam:PF00117 GO:GO:0005524
GO:GO:0003824 GO:GO:0046872 Gene3D:3.30.470.20 Gene3D:3.40.50.20
SUPFAM:SSF52440 GO:GO:0006807 InterPro:IPR017926 PROSITE:PS51273
GeneTree:ENSGT00390000015604 EMBL:CU582948
Ensembl:ENSSSCT00000031099 Uniprot:I3LIW0
Length = 248
Score = 121 (47.7 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 29/67 (43%), Positives = 38/67 (56%)
Query: 212 VHESLPFFSVQFHPEHTAGPADLELLFDIFINAVRDSK--TRTPVPPIRKTIYDTLVPKD 269
+HES PFF VQFHPE + GP D E LFD F + ++ K T T V P + + + V
Sbjct: 1 MHESKPFFGVQFHPEVSPGPLDTEYLFDSFFSLIKKGKGTTITSVLP-KPALVASRVEVS 59
Query: 270 EALIAKS 276
+ LI S
Sbjct: 60 KVLILGS 66
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.421 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 337 337 0.00093 116 3 11 22 0.40 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 60
No. of states in DFA: 617 (66 KB)
Total size of DFA: 253 KB (2136 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.92u 0.09s 27.01t Elapsed: 00:00:03
Total cpu time: 26.93u 0.09s 27.02t Elapsed: 00:00:03
Start: Thu Aug 15 15:07:47 2013 End: Thu Aug 15 15:07:50 2013