BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11285
(189 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q90404|AGRIN_DIPOM Agrin (Fragment) OS=Diplobatis ommata GN=AGRN PE=2 SV=1
Length = 1328
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 84/130 (64%), Gaps = 5/130 (3%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
C S YGCC DN T AQG AGCPSTC CN+ GS C + QC CK GVGGLKCDR
Sbjct: 52 CSRSVYGCCRDNVTAAQGVGLAGCPSTCECNRYGSYSKTCSPSSGQCSCKPGVGGLKCDR 111
Query: 68 CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDP 127
CEPG+W I + + GC C C G+VR+DCEQM+G C CK G+ G KCN+C P
Sbjct: 112 CEPGFWNFRGIVT--DEKSGCTPCNCYPLGAVRDDCEQMSGLCSCKAGISGMKCNQC--P 167
Query: 128 N-KKLGPNGC 136
N KLGP+GC
Sbjct: 168 NGSKLGPSGC 177
>sp|P31696|AGRIN_CHICK Agrin OS=Gallus gallus GN=AGRN PE=1 SV=3
Length = 2081
Score = 130 bits (327), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 83/133 (62%), Gaps = 5/133 (3%)
Query: 5 LKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLK 64
+ C + YGCCPDN TLA G AGCPSTC CN GS C T QC CK GVGGLK
Sbjct: 763 VVHCSQTIYGCCPDNMTLALGVGAAGCPSTCQCNPYGSYGGTCDPATGQCSCKPGVGGLK 822
Query: 65 CDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
CDRCEPG+W I + + GC C C GSVR+DCEQMTG C CK G+ G KCN+C
Sbjct: 823 CDRCEPGFWNFRGIVTDSK--SGCTPCNCDPVGSVRDDCEQMTGLCSCKTGITGMKCNQC 880
Query: 125 LDPN-KKLGPNGC 136
PN K+G GC
Sbjct: 881 --PNGSKMGMAGC 891
>sp|P25304|AGRIN_RAT Agrin OS=Rattus norvegicus GN=Agrn PE=1 SV=2
Length = 1959
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/165 (47%), Positives = 92/165 (55%), Gaps = 14/165 (8%)
Query: 3 IYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGG 62
+ C + YGCC DN T AQG AGCPSTC CN GS C T QC C+ GVGG
Sbjct: 656 VAFPHCAQTPYGCCQDNFTAAQGVGLAGCPSTCHCNPHGSYSGTCDPATGQCSCRPGVGG 715
Query: 63 LKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN 122
L+CDRCEPG+W I + GC C C G+VR+DCEQMTG C C+PGV G KC
Sbjct: 716 LRCDRCEPGFWNFRGIVTDG--HSGCTPCSCDPRGAVRDDCEQMTGLCSCRPGVAGPKCG 773
Query: 123 ECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGAN 167
+C D + LG GC E P PV T VE+ C GA+
Sbjct: 774 QCPD-GQVLGHLGC----EADPMT---PV----TCVEIHCEFGAS 806
>sp|O00468|AGRIN_HUMAN Agrin OS=Homo sapiens GN=AGRN PE=1 SV=5
Length = 2067
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/129 (53%), Positives = 79/129 (61%), Gaps = 3/129 (2%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
C + YGCC DN T A+G AGCPS C CN GS C T QC C+ GVGGL+CDR
Sbjct: 766 CAQTPYGCCQDNITAARGVGLAGCPSACQCNPHGSYGGTCDPATGQCSCRPGVGGLRCDR 825
Query: 68 CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDP 127
CEPG+W I + GC C C G+VR+DCEQMTG C CKPGV G KC +C D
Sbjct: 826 CEPGFWNFRGIVTDG--RSGCTPCSCDPQGAVRDDCEQMTGLCSCKPGVAGPKCGQCPD- 882
Query: 128 NKKLGPNGC 136
+ LGP GC
Sbjct: 883 GRALGPAGC 891
>sp|A2ASQ1|AGRIN_MOUSE Agrin OS=Mus musculus GN=Agrn PE=1 SV=1
Length = 1950
Score = 124 bits (310), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 91/160 (56%), Gaps = 14/160 (8%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
C + YGCC DN T AQG AGCPSTC CN GS C T QC C+ GVGGL+CDR
Sbjct: 661 CAQTPYGCCQDNVTAAQGVGLAGCPSTCHCNPHGSYSGTCDPVTGQCSCRPGVGGLRCDR 720
Query: 68 CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDP 127
CEPG+W I + GC C C G+VR+DCEQMTG C C+PGV G KC +C D
Sbjct: 721 CEPGFWNFRGIVTDG--HSGCTPCSCDPRGAVRDDCEQMTGLCSCRPGVAGPKCGQCPD- 777
Query: 128 NKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGAN 167
+ LG GC E P PV T VE+ C GA+
Sbjct: 778 GQALGHLGC----EADPTT---PV----TCVEMHCEFGAS 806
>sp|Q9Y6N6|LAMC3_HUMAN Laminin subunit gamma-3 OS=Homo sapiens GN=LAMC3 PE=1 SV=3
Length = 1575
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 34 TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
+C C+ LGS ED C T QC C+ GV G CDRC+ G++G S I GC C C
Sbjct: 916 SCKCHPLGSQEDQCHPKTGQCTCRPGVTGQACDRCQLGFFGFS--------IKGCRACRC 967
Query: 94 SQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
S G+ C + G CVC+PG +G KC+ C D
Sbjct: 968 SPLGAASAQCHE-NGTCVCRPGFEGYKCDRCHD 999
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 51/100 (51%), Gaps = 10/100 (10%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C GS C +DT C CK V G KCDRC PG+ LS+ GC C C+
Sbjct: 383 CDCQSAGSLHLQC-DDTGTCACKPTVTGWKCDRCLPGFHSLSE--------GGCRPCTCN 433
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN 134
GS+ + C+ +GRC CK V+G+ C+ C L P+
Sbjct: 434 PAGSL-DTCDPRSGRCPCKENVEGNLCDRCRPGTFNLQPH 472
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 55/126 (43%), Gaps = 16/126 (12%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDA--CIEDTEQCKCKQ 58
+G + + C + +YG LA P + P C C+ GS + C T QC C
Sbjct: 839 TGDHCEHCQEGFYG-----SALAPRPADKCMP--CSCHPQGSVSEQMPCDPVTGQCSCLP 891
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
V C RC PG++ L GC C C GS + C TG+C C+PGV G
Sbjct: 892 HVTARDCSRCYPGFFDLQPGR-------GCRSCKCHPLGSQEDQCHPKTGQCTCRPGVTG 944
Query: 119 SKCNEC 124
C+ C
Sbjct: 945 QACDRC 950
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 55 KCKQGVGGLKCDRCEPGYWGLSKISSYAPD-IDGCLKCGCSQFGSVRED--CEQMTGRCV 111
+C G C+ C+ G++G S+ AP D C+ C C GSV E C+ +TG+C
Sbjct: 833 RCLHNTTGDHCEHCQEGFYG----SALAPRPADKCMPCSCHPQGSVSEQMPCDPVTGQCS 888
Query: 112 CKPGVKGSKCNECLDPNKKLGP 133
C P V C+ C L P
Sbjct: 889 CLPHVTARDCSRCYPGFFDLQP 910
Score = 34.7 bits (78), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 46/109 (42%), Gaps = 10/109 (9%)
Query: 19 NKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKI 78
+ + QG A C C CN+ G+ C +T C C G C+RC PG++G
Sbjct: 692 KREMPQGGPYASC-VPCTCNQHGT----CDPNTGICVCSHHTEGPSCERCLPGFYG---- 742
Query: 79 SSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNECLD 126
+ +A D C C C + E C C PG +G +C C D
Sbjct: 743 NPFAGQADDCQPCPCPGQSACTTIPESREVVCTHCPPGQRGRRCEVCDD 791
Score = 32.0 bits (71), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
Query: 34 TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C C+ LG+ C E+ C C+ G G KCDRC ++ D C +C
Sbjct: 964 ACRCSPLGAASAQCHENGT-CVCRPGFEGYKCDRCHDNFF-------LTADGTHCQQCP- 1014
Query: 94 SQFGSVREDCEQMTGRCVCKPG-VKGSKC 121
S + V+E+ ++ R G ++GS C
Sbjct: 1015 SCYALVKEEAAKLKARLTLTEGWLQGSDC 1043
>sp|Q1LVF0|LAMC1_DANRE Laminin subunit gamma-1 OS=Danio rerio GN=lamc1 PE=2 SV=2
Length = 1593
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 60/111 (54%), Gaps = 19/111 (17%)
Query: 34 TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
+CGCN +GS C ++T +C CK GV G KCDRC+PGY LS+ GC C C
Sbjct: 381 SCGCNPVGSLSTQC-DNTGRCSCKPGVMGDKCDRCQPGYHSLSEA--------GCRPCSC 431
Query: 94 SQFGSVREDCEQMTGRCVCKPGVKGSKCNEC------LDPNKKLGPNGCMP 138
+ GS +E C+ TGRC CK V G C+ C LDP P GC P
Sbjct: 432 NPAGSTQE-CDVQTGRCQCKENVDGFNCDRCKLGYFNLDPQ---NPQGCTP 478
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C CN +GST C + QC+C+ GV G C+RCE ++G S GC C C
Sbjct: 919 CNCNPIGSTNGQCDIVSGQCECQPGVTGQHCERCEVNFFGFSS--------SGCKPCDCD 970
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
GS C++ GRC C+PG GS+C+ C
Sbjct: 971 PEGSESAQCKE-DGRCHCRPGFVGSRCDMC 999
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
C G KC+RC Y+ + CL CGC+ GS+ C+ TGRC CKPG
Sbjct: 354 CADNTDGPKCERCLANYYREASGQR-------CLSCGCNPVGSLSTQCDN-TGRCSCKPG 405
Query: 116 VKGSKCNECLDPNKKLGPNGCMP 138
V G KC+ C L GC P
Sbjct: 406 VMGDKCDRCQPGYHSLSEAGCRP 428
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 55 KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSV--REDCEQMTGRCVC 112
KC G+ CDRC+ G++G ++ ++ A D C C CS +G+V + C Q+TG+C C
Sbjct: 835 KCIYNTAGVFCDRCKQGFYGDARAANVA---DKCKPCKCSPYGTVDRQTACSQVTGQCPC 891
Query: 113 KPGVKGSKCNEC 124
P V C C
Sbjct: 892 LPHVINRDCGAC 903
Score = 33.9 bits (76), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISS 80
C CN D C +T C C+ GL C+RC+ G++G S + S
Sbjct: 708 CNCN---GHSDTCDPETGMCNCQHNTAGLSCERCKDGFYGDSTVGS 750
Score = 30.4 bits (67), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 14/80 (17%)
Query: 51 TEQCKCKQGVGGLKCDRCEPGYWG----LSKISSYAPDIDGCLKCGCSQFGSVREDCEQM 106
E+C C QG G C++C+ G+ L + S+ C +C C+ C+
Sbjct: 671 VEKCTCPQGYLGQHCEQCDQGFRRSRPELRRFST-------CERCNCNGHSDT---CDPE 720
Query: 107 TGRCVCKPGVKGSKCNECLD 126
TG C C+ G C C D
Sbjct: 721 TGMCNCQHNTAGLSCERCKD 740
>sp|P11046|LAMB1_DROME Laminin subunit beta-1 OS=Drosophila melanogaster GN=LanB1 PE=1 SV=4
Length = 1788
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 12/110 (10%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C ++ +A G GC S C C+ +G+ + C T QC+CK G GG C++C+ YWG
Sbjct: 1078 CAENHWKIASG---EGCES-CNCDPIGALHEQCNSYTGQCQCKPGFGGRACNQCQAHYWG 1133
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
P+ + C C C QFG+ C++ TG CVC G+ G KCNEC
Sbjct: 1134 -------NPN-EKCQPCECDQFGAADFQCDRETGNCVCHEGIGGYKCNEC 1175
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 33 STCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
S C CN GS C + C+CK V G +CD+C PG +G + P +GC C
Sbjct: 787 SMCNCNPTGSLSKVCESNGGYCQCKPNVVGRQCDQCAPGTYG------FGP--EGCKACD 838
Query: 93 CSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C+ GS + C+ +TG+C C P G +CN+C
Sbjct: 839 CNSIGSKDKYCDLITGQCQCVPNTYGRECNQC 870
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 55/106 (51%), Gaps = 14/106 (13%)
Query: 35 CGCNKLGS--TEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
C C+ LG+ T C T QC C V G++CD+C +W KI+S +GC C
Sbjct: 1043 CECDFLGTNNTIAHCDRFTGQCPCLPNVQGVRCDQCAENHW---KIASG----EGCESCN 1095
Query: 93 CSQFGSVREDCEQMTGRCVCKPGVKGSKCNECL-----DPNKKLGP 133
C G++ E C TG+C CKPG G CN+C +PN+K P
Sbjct: 1096 CDPIGALHEQCNSYTGQCQCKPGFGGRACNQCQAHYWGNPNEKCQP 1141
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 7/90 (7%)
Query: 35 CGCNKLGSTEDA-CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C CN LG+ ++ C+ T +CKCK+ V G C++C P +GLS+ +P+ GC C C
Sbjct: 478 CTCNPLGTLNNSGCVMRTGECKCKKYVTGKDCNQCMPETYGLSE----SPE--GCSLCNC 531
Query: 94 SQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
GS C+ ++G+C C+P + G C++
Sbjct: 532 DAGGSYDNYCDVISGQCRCRPHMTGRSCSQ 561
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 37 CNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQF 96
C+ L E+ + C CK V G +C++C+ GYW L + + +GC C C+
Sbjct: 431 CDSLNELEEGAVAGA--CHCKAFVTGRRCNQCKDGYWNLQ-----SDNPEGCEPCTCNPL 483
Query: 97 GSVRED-CEQMTGRCVCKPGVKGSKCNECLDPNKKL--GPNGC 136
G++ C TG C CK V G CN+C+ L P GC
Sbjct: 484 GTLNNSGCVMRTGECKCKKYVTGKDCNQCMPETYGLSESPEGC 526
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 17/107 (15%)
Query: 21 TLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISS 80
T GP+ GC + C CN +GS + C T QC+C G +C++C+PGYW +
Sbjct: 826 TYGFGPE--GCKA-CDCNSIGSKDKYCDLITGQCQCVPNTYGRECNQCQPGYWNFPE--- 879
Query: 81 YAPDIDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNECLD 126
C C C+ + C+ + G C+ C+ G C+ CLD
Sbjct: 880 -------CRVCQCNGHAAT---CDPIQGTCIDCQDSTTGYSCDSCLD 916
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 49 EDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTG 108
+D E+ CK + + + +P L I S DG C C+ GS+ + CE G
Sbjct: 749 KDYEKYNCKSSLYDMNY-KSDPKCQNLDNILSVFVH-DGASMCNCNPTGSLSKVCESNGG 806
Query: 109 RCVCKPGVKGSKCNECLDPNKKLGPNGC 136
C CKP V G +C++C GP GC
Sbjct: 807 YCQCKPNVVGRQCDQCAPGTYGFGPEGC 834
Score = 37.7 bits (86), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C C++ G+ + C +T C C +G+GG KC+ C GY G
Sbjct: 1142 CECDQFGAADFQCDRETGNCVCHEGIGGYKCNECARGYIG 1181
Score = 30.4 bits (67), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 53/128 (41%), Gaps = 19/128 (14%)
Query: 7 SCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ----CKCKQGVGG 62
SCLD +YG + P CP T + D C DT C C++G G
Sbjct: 913 SCLDGYYGNPLFGSEIGCRP--CRCPETVASGLAHA--DGCSLDTRNNNMLCHCQEGYSG 968
Query: 63 LKCDRCEPGYWGLSKISSYAPDIDG-CLKCGCSQFGSVRE--DCEQMTGRCV-CKPGVKG 118
+C+ C ++G PD G C KC CS + + +C++ TG C+ C G
Sbjct: 969 SRCEICADNFFG-------NPDNGGTCSKCECSNNVDLYDTGNCDRQTGACLKCLYQTTG 1021
Query: 119 SKCNECLD 126
C C D
Sbjct: 1022 DHCELCKD 1029
>sp|P24043|LAMA2_HUMAN Laminin subunit alpha-2 OS=Homo sapiens GN=LAMA2 PE=1 SV=4
Length = 3122
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 65/136 (47%), Gaps = 18/136 (13%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
+G Y + C D ++G D K C CN GS + C T QC+C+ V
Sbjct: 894 TGRYCELCADGYFGDAVDAKNC----------QPCRCNAGGSFSEVCHSQTGQCECRANV 943
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSK 120
G +CD+C+ G +GL GC+ C C+ FGS DCE+ +G+C C+PGV G K
Sbjct: 944 QGQRCDKCKAGTFGLQSAR-------GCVPCNCNSFGSKSFDCEE-SGQCWCQPGVTGKK 995
Query: 121 CNECLDPNKKLGPNGC 136
C+ C GC
Sbjct: 996 CDRCAHGYFNFQEGGC 1011
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 47/99 (47%), Gaps = 21/99 (21%)
Query: 35 CGCNKLGSTEDACIEDTEQ---------CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
C C+ +GS + C++D + C CK G GG+ CDRC GY G PD
Sbjct: 414 CHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGYTGY-------PD- 465
Query: 86 DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C C CS GS ED G C+CK V+G C+ C
Sbjct: 466 --CKACNCSGLGSKNED--PCFGPCICKENVEGGDCSRC 500
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
Query: 33 STCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
+ C C+ LG+ C T +C C G KC +C P WG S + GC C
Sbjct: 1012 TACECSHLGNN---CDPKTGRCICPPNTIGEKCSKCAPNTWGHSITT-------GCKACN 1061
Query: 93 CSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
CS GS+ C TG+C C P G+KC EC
Sbjct: 1062 CSTVGSLDFQCNVNTGQCNCHPKFSGAKCTEC 1093
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 48 IEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG--CLKCGCSQFGSVREDCEQ 105
++D C +G G C+RC PGY G +P G C +C C +GS+ C+
Sbjct: 1489 LDDYRCTACPRGYEGQYCERCAPGYTG-------SPGNPGGSCQECECDPYGSLPVPCDP 1541
Query: 106 MTGRCVCKPGVKGSKCNEC 124
+TG C C+PG G KC+ C
Sbjct: 1542 VTGFCTCRPGATGRKCDGC 1560
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 11/91 (12%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
CK G G C+ C GY+G A D C C C+ GS E C TG+C C+
Sbjct: 889 CKPGTTGRYCELCADGYFG------DAVDAKNCQPCRCNAGGSFSEVCHSQTGQCECRAN 942
Query: 116 VKGSKCNECLDPNKKLGPNGCMPGMEVKPCN 146
V+G +C++C K G G PCN
Sbjct: 943 VQGQRCDKC-----KAGTFGLQSARGCVPCN 968
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 19/99 (19%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISS---YAPDIDGCL-- 89
C C+ +GS + C +T QC C G KC C G+W + + + P D
Sbjct: 1060 CNCSTVGSLDFQCNVNTGQCNCHPKFSGAKCTECSRGHWNYPRCNLCDCFLPGTDATTCD 1119
Query: 90 ----KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
KC CS TG+C CK V+G C+ C
Sbjct: 1120 SETKKCSCSD----------QTGQCTCKVNVEGIHCDRC 1148
Score = 37.0 bits (84), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 46 ACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRE 101
+C + T QC CK V G+ CDRC PG +GL A + GC C C FG+ +
Sbjct: 1126 SCSDQTGQCTCKVNVEGIHCDRCRPGKFGLD-----AKNPLGCSSCYC--FGTTTQ 1174
Score = 30.8 bits (68), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 12/104 (11%)
Query: 41 GSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKI---SSYAPDIDGCLKCGCSQFG 97
G+T + E+C C G GL C+ C PG++ L + P + C+ C C+
Sbjct: 1367 GTTMTPPADLIEKCDCPLGYSGLSCEACLPGFYRLRSQPGGRTPGPTLGTCVPCQCNGHS 1426
Query: 98 SVREDCEQMTGRCV-CKPGVKGSKCNECLDPNKKLGPNGCMPGM 140
S+ C+ T C C+ G C C LG G + G+
Sbjct: 1427 SL---CDPETSICQNCQHHTAGDFCERC-----ALGYYGIVKGL 1462
Score = 30.4 bits (67), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 11/78 (14%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQ---------M 106
C Q G+ C+ C G++ +S P C C C GS+ E C +
Sbjct: 381 CTQNTAGINCETCTDGFFRPKGVSPNYP--RPCQPCHCDPIGSLNEVCVKDEKHARRGLA 438
Query: 107 TGRCVCKPGVKGSKCNEC 124
G C CK G G C+ C
Sbjct: 439 PGSCHCKTGFGGVSCDRC 456
>sp|Q9R0B6|LAMC3_MOUSE Laminin subunit gamma-3 OS=Mus musculus GN=Lamc3 PE=2 SV=2
Length = 1581
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 34 TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
+C C+ LGS E+ C T QC C+ GV G CDRC+ G++G S I GC C C
Sbjct: 927 SCKCHPLGSLENKCHPKTGQCPCRPGVTGQACDRCQLGFFGFS--------IKGCRDCRC 978
Query: 94 SQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
S G+ C + CVC+PG G KC+ C D
Sbjct: 979 SPLGAASSQCHE-NSTCVCRPGFVGYKCDRCQD 1010
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 57/125 (45%), Gaps = 15/125 (12%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGS-TEDACIEDTEQCKCKQG 59
+G + + C + +YG +A P + P C C+ GS +E C T QC C
Sbjct: 851 TGAHCEHCREGFYG-----SAVATRPVDKCAP--CSCDLRGSVSEKTCNPVTGQCVCLPY 903
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGS 119
V G C RC PG++ L GC C C GS+ C TG+C C+PGV G
Sbjct: 904 VSGRDCSRCSPGFYDLQSGR-------GCQSCKCHPLGSLENKCHPKTGQCPCRPGVTGQ 956
Query: 120 KCNEC 124
C+ C
Sbjct: 957 ACDRC 961
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ GS C +++ C CK V G KCDRC PG+ LS+ GC C C+
Sbjct: 392 CDCHPAGSLSLQC-DNSGVCPCKPTVTGWKCDRCLPGFHSLSE--------GGCRPCACN 442
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN 134
GS+ C+ +G C CK V+GS C+ C L P+
Sbjct: 443 VAGSL-GTCDPRSGNCPCKENVEGSLCDRCRPGTFNLQPH 481
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 55 KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKP 114
+C+ G C+RCE Y+ + S P C C C GS+ C+ +G C CKP
Sbjct: 363 RCRDHTTGPHCERCEKNYY---RWSPKTP----CQPCDCHPAGSLSLQCDN-SGVCPCKP 414
Query: 115 GVKGSKCNECLDPNKKLGPNGCMP 138
V G KC+ CL L GC P
Sbjct: 415 TVTGWKCDRCLPGFHSLSEGGCRP 438
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ LG+ C E++ C C+ G G KCDRC+ ++ A GC +C
Sbjct: 976 CRCSPLGAASSQCHENST-CVCRPGFVGYKCDRCQDNFF-------LADGDTGCQECPTC 1027
Query: 95 QFGSVREDCEQMTGRCVCKPG 115
+ V+E+ ++ R + G
Sbjct: 1028 -YALVKEEAAKLKARLMLMEG 1047
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 51 TEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRC 110
E C C QG G C+ C GY +I P + C+ C C+Q G+ C+ TG C
Sbjct: 682 VETCLCPQGYTGQFCEFCALGY--KREIPHGGPYAN-CIPCTCNQHGT----CDPNTGIC 734
Query: 111 VCKPGVKGSKCNECL 125
+C +G C C+
Sbjct: 735 LCGHHTEGPSCERCM 749
Score = 32.0 bits (71), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P +L++G GC C CN GS C + C CK+ V G CDRC PG +
Sbjct: 424 CLPGFHSLSEG----GC-RPCACNVAGSL-GTCDPRSGNCPCKENVEGSLCDRCRPGTFN 477
Query: 75 L 75
L
Sbjct: 478 L 478
Score = 32.0 bits (71), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 9/93 (9%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C CN+ G+ C +T C C G C+RC PG++G ++++ D C C C
Sbjct: 719 CTCNQHGT----CDPNTGICLCGHHTEGPSCERCMPGFYG----NAFSGRADDCQPCPCP 770
Query: 95 QFGSVREDCEQMTGRCV-CKPGVKGSKCNECLD 126
+ E C C PG +G +C C D
Sbjct: 771 GQSACATIPESGDVVCTHCPPGQRGRRCESCED 803
Score = 30.0 bits (66), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 54 CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C+C+ G+ C+RC P + A D + CL C CS
Sbjct: 299 CRCQHNTTGVDCERCLPFFQDRPWARGTAEDANECLPCNCS 339
>sp|A0JP86|LAMC1_XENTR Laminin subunit gamma-1 OS=Xenopus tropicalis GN=lamc1 PE=2 SV=1
Length = 1592
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 64/139 (46%), Gaps = 16/139 (11%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGST--EDACIEDTEQCKCKQG 59
G Y C D +YG LAQ PD C + C CN G+ + C + T QC+C
Sbjct: 841 GFYCDRCRDGFYG-----NPLAQNPD-LKCRA-CSCNPYGTVKGQSGCNQVTGQCECLPH 893
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGS 119
V C CEPG++ L GC +C C GS C+ TG+C C PG+ G
Sbjct: 894 VTERDCSACEPGFYNLLSGR-------GCERCDCHSLGSTSGQCDVRTGQCECHPGISGQ 946
Query: 120 KCNECLDPNKKLGPNGCMP 138
+C +C + GP GC P
Sbjct: 947 QCQQCEPNHFGFGPEGCKP 965
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ LGST C T QC+C G+ G +C +CEP ++G + P+ GC C C
Sbjct: 918 CDCHSLGSTSGQCDVRTGQCECHPGISGQQCQQCEPNHFG------FGPE--GCKPCDCD 969
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
GS C++ GRC CK G G++C++C
Sbjct: 970 PEGSGSLQCKE-DGRCECKSGFVGTRCDQC 998
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 55 KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVR--EDCEQMTGRCVC 112
KC GG CDRC G++G + PD+ C C C+ +G+V+ C Q+TG+C C
Sbjct: 834 KCIYNTGGFYCDRCRDGFYG--NPLAQNPDLK-CRACSCNPYGTVKGQSGCNQVTGQCEC 890
Query: 113 KPGVKGSKCNEC 124
P V C+ C
Sbjct: 891 LPHVTERDCSAC 902
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 29 AGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
AGC C CN GST D C +T +C CK V G C+RC+PG++ L + + GC
Sbjct: 423 AGC-RPCACNPAGST-DECNVETGRCSCKDNVEGFNCERCKPGFFHLDEANPR-----GC 475
Query: 89 LKCGCSQFGSV 99
C C SV
Sbjct: 476 TPCFCYGHSSV 486
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
C G C+RC Y+ + + C C C+ GS+ C+ GRC CKPG
Sbjct: 353 CADNTDGPNCERCRENYY-------RQDNNEPCHACQCNPVGSLSTQCDNY-GRCSCKPG 404
Query: 116 VKGSKCNECLDPNKKLGPNGCMP 138
V G KC+ C L GC P
Sbjct: 405 VMGEKCDRCQPGFHSLTEAGCRP 427
Score = 31.2 bits (69), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C C+ GS C ED +C+CK G G +CD+CE Y+
Sbjct: 966 CDCDPEGSGSLQCKEDG-RCECKSGFVGTRCDQCEENYF 1003
>sp|O75445|USH2A_HUMAN Usherin OS=Homo sapiens GN=USH2A PE=1 SV=3
Length = 5202
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 12/108 (11%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C CN GS C + QC+CK+ GL+CD C ++GL D+ C C C
Sbjct: 747 CQCNLHGSVNKFCNPHSGQCECKKEAKGLQCDTCRENFYGL--------DVTNCKACDCD 798
Query: 95 QFGSVR-EDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNG---CMP 138
GS+ C TG+C+CKP V+G +CN+CL+ N L N C+P
Sbjct: 799 TAGSLPGTVCNAKTGQCICKPNVEGRQCNKCLEGNFYLRQNNSFLCLP 846
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 8/129 (6%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQG-VGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C C+ G+ C T QC C+ + G +CD+C+ Y+G + P C C C
Sbjct: 951 CSCHTTGAVNHICNSLTGQCVCQDASIAGQRCDQCKDHYFG------FDPQTGRCQPCNC 1004
Query: 94 SQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVIN 153
G++ E C +TG+C CK V GSKC+ C+ L N + G P PP
Sbjct: 1005 HLSGALNETCHLVTGQCFCKQFVTGSKCDACVPSASHLDVNNLL-GCSKTPFQQPPPRGQ 1063
Query: 154 LQTGVELDC 162
+Q+ ++
Sbjct: 1064 VQSSSAINL 1072
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
Query: 35 CGCNKLGSTEDACI--EDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
C C+K G+ + + + T QC CK GV GL+C++CEP + L+ + C C
Sbjct: 847 CNCDKTGTINGSLLCNKSTGQCPCKLGVTGLRCNQCEPHRYNLT-----IDNFQHCQMCE 901
Query: 93 CSQFGSVR-EDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGP---NGCMP 138
C G++ C+ ++G+C+C P +G +CN+C P + P GC+P
Sbjct: 902 CDSLGTLPGTICDPISGQCLCVPNRQGRRCNQC-QPGFYISPGNATGCLP 950
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 55/103 (53%), Gaps = 8/103 (7%)
Query: 24 QGPDNAGCPSTCGCNKLGSTE--DACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSY 81
Q D GC S C CN G+ + C +++ QCKCK V GL+CD C G+ L +
Sbjct: 684 QELDPDGC-SPCNCNTSGTVDGDITCHQNSGQCKCKANVIGLRCDHCNFGFKFLRSFN-- 740
Query: 82 APDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
D+ GC C C+ GSV + C +G+C CK KG +C+ C
Sbjct: 741 --DV-GCEPCQCNLHGSVNKFCNPHSGQCECKKEAKGLQCDTC 780
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 35 CGCNKLGSTEDACIEDTE--QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
C C+ +G+ + + D QC CK+ V G +C++C+ G++ L ++ D DGC C
Sbjct: 641 CDCDTVGTRNGSILCDQIGGQCNCKRHVSGRQCNQCQNGFYNLQEL-----DPDGCSPCN 695
Query: 93 CSQFGSVRED--CEQMTGRCVCKPGVKGSKCNEC 124
C+ G+V D C Q +G+C CK V G +C+ C
Sbjct: 696 CNTSGTVDGDITCHQNSGQCKCKANVIGLRCDHC 729
>sp|P55268|LAMB2_HUMAN Laminin subunit beta-2 OS=Homo sapiens GN=LAMB2 PE=1 SV=2
Length = 1798
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 68/158 (43%), Gaps = 16/158 (10%)
Query: 14 GCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C P +L+ N P C CN GS C QC CK GV G +CD C PGY+
Sbjct: 764 ACAPLLISLSTLIYNGALP--CQCNPQGSLSSECNPHGGQCLCKPGVVGRRCDLCAPGYY 821
Query: 74 GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGP 133
G GC C CS G++ CE+ +G+C+C+ G G +C+ C + G
Sbjct: 822 GFGPT--------GCQACQCSHEGALSSLCEKTSGQCLCRTGAFGLRCDRC--QRGQWGF 871
Query: 134 NGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
C P + CNG N TG L C E C
Sbjct: 872 PSCRPCV----CNGHADECNTHTGACLGCRDHTGGEHC 905
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 27 DNAGCPSTCGCNKLGST--EDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
D GC C CN G+ C ++ C CK+ V G CDRC PG+WGLS D
Sbjct: 463 DRLGC-RRCQCNARGTVPGSTPCDPNSGSCYCKRLVTGRGCDRCLPGHWGLSH------D 515
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
+ GC C C G++ C++ TG+C C+ + G +C +
Sbjct: 516 LLGCRPCDCDVGGALDPQCDEGTGQCHCRQHMVGRRCEQ 554
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 12/110 (10%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P+ L G GC C C+ + C E T QC C+ G GG C C+ +WG
Sbjct: 1079 CAPNFWNLTSG---HGC-QPCACHPSRARGPTCNEFTGQCHCRAGFGGRTCSECQELHWG 1134
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
+ C C C G C + TG C C+PGV G +C++C
Sbjct: 1135 DPGLQ--------CHACDCDSRGIDTPQCHRFTGHCSCRPGVSGVRCDQC 1176
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 41/98 (41%), Gaps = 15/98 (15%)
Query: 35 CGCNKLGSTEDACIEDTE--------QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
C CN LG+ C + QC C V G CDRC P +W L+
Sbjct: 1038 CTCNLLGTNPQQCPSPDQCHCDPSSGQCPCLPNVQGPSCDRCAPNFWNLTSGH------- 1090
Query: 87 GCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
GC C C + C + TG+C C+ G G C+EC
Sbjct: 1091 GCQPCACHPSRARGPTCNEFTGQCHCRAGFGGRTCSEC 1128
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 53 QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSV--REDCEQMTGRC 110
QC+CK+ V G +C +C G++GLS IS D GC +C C+ G+V C+ +G C
Sbjct: 437 QCRCKEHVVGTRCQQCRDGFFGLS-IS----DRLGCRRCQCNARGTVPGSTPCDPNSGSC 491
Query: 111 VCKPGVKGSKCNECLDPNKKLGPN--GCMP 138
CK V G C+ CL + L + GC P
Sbjct: 492 YCKRLVTGRGCDRCLPGHWGLSHDLLGCRP 521
Score = 34.7 bits (78), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C C+ G+ + C E T QC C+Q + G +C++ +PGY+
Sbjct: 522 CDCDVGGALDPQCDEGTGQCHCRQHMVGRRCEQVQPGYF 560
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 34 TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGL 75
C C+ G C T C C+ GV G++CD+C G+ G+
Sbjct: 1142 ACDCDSRGIDTPQCHRFTGHCSCRPGVSGVRCDQCARGFSGI 1183
>sp|Q8JHV6|LAMB4_DANRE Laminin subunit beta-4 OS=Danio rerio GN=lamb4 PE=2 SV=1
Length = 1827
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 27 DNAGCPSTCGCNKLGSTE--DACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
D +GC C CN LG+ + + C T +C C+ G +CD+C PGYWGL
Sbjct: 442 DPSGC-QLCRCNFLGTIQVGNPCDPTTGRCICEHFAYGSQCDQCLPGYWGLGNT------ 494
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGP--------NGC 136
+ GC+ C C G+++ +C + G+C C+P + G KCN+ P L P
Sbjct: 495 VYGCIPCDCDIGGALKTECSSVDGQCKCRPNMVGQKCNDPA-PGYFLAPLDFYIYEAENA 553
Query: 137 MPGMEVKPCNGEPPVINLQTGV 158
P + P G PP + G+
Sbjct: 554 APLAVISPFIGPPPFVYPTEGI 575
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 53 QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVR--EDCEQMTGRC 110
QC CKQ + G +CDRC+ G++G S+ D GC C C+ G+++ C+ TGRC
Sbjct: 416 QCVCKQNIEGERCDRCKVGFYGFSR-----DDPSGCQLCRCNFLGTIQVGNPCDPTTGRC 470
Query: 111 VCKPGVKGSKCNECLDPNKKLGPN--GCMP 138
+C+ GS+C++CL LG GC+P
Sbjct: 471 ICEHFAYGSQCDQCLPGYWGLGNTVYGCIP 500
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C CN+ + C + T QC C+ GG CD C P ++G PD+ C+ C C+
Sbjct: 1163 CNCNREHALNYICDKITGQCLCQPEYGGRICDECGPNHFG-------NPDLQ-CMFCDCN 1214
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
G+V C+ TG C+CKPGV G C+EC
Sbjct: 1215 LEGTVHPACDAYTGECLCKPGVTGPFCDEC 1244
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 34 TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
+C C+ +G+ +C + QC+CK V G CD C P +GL +GC C C
Sbjct: 852 SCNCHHVGAYGSSCSKFGGQCQCKPNVIGRCCDSCAPLTYGLGP--------NGCSPCDC 903
Query: 94 SQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
+ GS E C+Q TG+C C+ G+ G +CN C
Sbjct: 904 DRSGSTTELCDQTTGQCSCRDGITGLQCNRC 934
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 17/105 (16%)
Query: 21 TLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISS 80
T GP+ GC S C C++ GST + C + T QC C+ G+ GL+C+RC PGY+G
Sbjct: 890 TYGLGPN--GC-SPCDCDRSGSTTELCDQTTGQCSCRDGITGLQCNRCYPGYYGFPL--- 943
Query: 81 YAPDIDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNEC 124
C +C C++ + C+ +TG C+ C+ G C C
Sbjct: 944 -------CRRCQCNRLADI---CDPITGDCLDCREHSAGRNCERC 978
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 15/101 (14%)
Query: 24 QGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAP 83
+G D++ CP+ C C +DT QC C+ GV G C+ C+ GYW + Y
Sbjct: 1111 RGTDDSKCPAGSPC--------FCDQDTGQCPCRPGVQGALCNECDDGYWNMD--GDY-- 1158
Query: 84 DIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
GC C C++ ++ C+++TG+C+C+P G C+EC
Sbjct: 1159 ---GCQPCNCNREHALNYICDKITGQCLCQPEYGGRICDEC 1196
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 17/104 (16%)
Query: 45 DACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED- 102
DAC T +C +C G +C C+ GY+G ++ A D C +C C + G+
Sbjct: 1066 DACDPVTGECLRCLHNTEGPRCQSCKRGYYG----NALAQD---CKECSCDRRGTDDSKC 1118
Query: 103 -------CEQMTGRCVCKPGVKGSKCNECLDPNKKL-GPNGCMP 138
C+Q TG+C C+PGV+G+ CNEC D + G GC P
Sbjct: 1119 PAGSPCFCDQDTGQCPCRPGVQGALCNECDDGYWNMDGDYGCQP 1162
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%)
Query: 86 DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP 138
+G + C C G+ C + G+C CKP V G C+ C LGPNGC P
Sbjct: 848 NGAVSCNCHHVGAYGSSCSKFGGQCQCKPNVIGRCCDSCAPLTYGLGPNGCSP 900
Score = 35.4 bits (80), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Query: 53 QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVC 112
+C C+ G C+RC+ Y D D C +C C S E C R +
Sbjct: 296 RCVCQHNTAGYNCERCQDFYHDAPWRPGGKADSDVCKRCNCH---SHSEKCHFELARYLA 352
Query: 113 KPGVKGSKCNECLDPNKKLGP 133
GV G C++C N ++GP
Sbjct: 353 TGGVSGGVCDDCR--NNRIGP 371
>sp|P07942|LAMB1_HUMAN Laminin subunit beta-1 OS=Homo sapiens GN=LAMB1 PE=1 SV=2
Length = 1786
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 9/99 (9%)
Query: 27 DNAGCPSTCGCNKLGSTE--DACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
D GC S C CN LG+ + C +T C CK+ V G CD+C P +WGLS D
Sbjct: 451 DPFGCKS-CACNPLGTIPGGNPCDSETGHCYCKRLVTGQHCDQCLPEHWGLSN------D 503
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
+DGC C C G++ C +G+C C+P + G +CNE
Sbjct: 504 LDGCRPCDCDLGGALNNSCFAESGQCSCRPHMIGRQCNE 542
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 55/110 (50%), Gaps = 12/110 (10%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P+ LA G GC C CN S +C E T QC+C G GG C C+ +WG
Sbjct: 1068 CAPNTWQLASG---TGC-DPCNCNAAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWG 1123
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
PD++ C C C G C+Q TG+CVC GV+G +C++C
Sbjct: 1124 -------DPDVE-CRACDCDPRGIETPQCDQSTGQCVCVEGVEGPRCDKC 1165
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 45/97 (46%), Gaps = 14/97 (14%)
Query: 35 CGCNKLGSTED-------ACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
C CN LG+ ++ C + T QC C V G CDRC P W L+ + G
Sbjct: 1028 CVCNYLGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGT-------G 1080
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C C C+ S C + TG+C C PG G C+EC
Sbjct: 1081 CDPCNCNAAHSFGPSCNEFTGQCQCMPGFGGRTCSEC 1117
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 34 TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C C+ GS C + QC+C+ V G C+RC PG +G + P GC C C
Sbjct: 772 ACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFG------FGP--SGCKPCEC 823
Query: 94 SQFGSVREDCEQMTGRCVCKPGVKGSKCNECL 125
GSV C +TG+C C GV +C+ CL
Sbjct: 824 HLQGSVNAFCNPVTGQCHCFQGVYARQCDRCL 855
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 53 QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVR--EDCEQMTGRC 110
QC+CK V G CD C+ G++ LS + D GC C C+ G++ C+ TG C
Sbjct: 425 QCRCKLNVEGEHCDVCKEGFYDLS-----SEDPFGCKSCACNPLGTIPGGNPCDSETGHC 479
Query: 111 VCKPGVKGSKCNECLDPNKKLG--PNGCMP 138
CK V G C++CL + L +GC P
Sbjct: 480 YCKRLVTGQHCDQCLPEHWGLSNDLDGCRP 509
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 21 TLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISS 80
T GP +GC C C+ GS C T QC C QGV +CDRC PG+WG
Sbjct: 810 TFGFGP--SGC-KPCECHLQGSVNAFCNPVTGQCHCFQGVYARQCDRCLPGHWGFP---- 862
Query: 81 YAPDIDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNECL 125
C C C+ +DC+ +TG C+ C+ G C CL
Sbjct: 863 ------SCQPCQCNGHA---DDCDPVTGECLNCQDYTMGHNCERCL 899
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 17/111 (15%)
Query: 38 NKLGSTE-DACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQ 95
N + +T+ +AC ++T +C KC G C C GY+G + D C KC C+
Sbjct: 980 NNIDTTDPEACDKETGRCLKCLYHTEGEHCQFCRFGYYG----DALQQD---CRKCVCNY 1032
Query: 96 FGSVRE-------DCEQMTGRCVCKPGVKGSKCNECLDPNKKLGP-NGCMP 138
G+V+E C++ TG+C+C P V G C+ C +L GC P
Sbjct: 1033 LGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGTGCDP 1083
Score = 37.0 bits (84), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 25/50 (50%)
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP 138
L C C GS+ C+ G+C C+P V G CN C GP+GC P
Sbjct: 771 LACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPSGCKP 820
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C P++ L+ D GC C C+ G+ ++C ++ QC C+ + G +C+ EPGY+
Sbjct: 493 CLPEHWGLSNDLD--GC-RPCDCDLGGALNNSCFAESGQCSCRPHMIGRQCNEVEPGYY 548
>sp|P02469|LAMB1_MOUSE Laminin subunit beta-1 OS=Mus musculus GN=Lamb1 PE=1 SV=3
Length = 1786
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 27 DNAGCPSTCGCNKLGSTE--DACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
D GC S C CN LG+ + C +T C CK+ V G +CD+C P +WGLS D
Sbjct: 451 DPYGCKS-CACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSN------D 503
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
+DGC C C G++ C + +G+C C P + G +CNE
Sbjct: 504 LDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNE 542
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 55/110 (50%), Gaps = 12/110 (10%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P+ LA G GC C CN S +C E T QC+C G GG C C+ +WG
Sbjct: 1068 CAPNTWQLASG---TGC-GPCNCNAAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWG 1123
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
PD++ C C C G C+Q TG+CVC GV+G +C++C
Sbjct: 1124 -------DPDVE-CRACDCDPRGIETPQCDQSTGQCVCVEGVEGPRCDKC 1165
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 45/97 (46%), Gaps = 14/97 (14%)
Query: 35 CGCNKLGSTEDAC-------IEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
C CN LG+ ++ C + T QC C V G CDRC P W L+ + G
Sbjct: 1028 CVCNYLGTVKEHCNGSDCHCDKATGQCSCLPNVIGQNCDRCAPNTWQLASGT-------G 1080
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C C C+ S C + TG+C C PG G C+EC
Sbjct: 1081 CGPCNCNAAHSFGPSCNEFTGQCQCMPGFGGRTCSEC 1117
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 34 TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C C+ GS C + QC+C+ V G C+RC PG +G + P +GC C C
Sbjct: 772 ACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFG------FGP--NGCKPCDC 823
Query: 94 SQFGSVREDCEQMTGRCVCKPGVKGSKCNECL 125
GS C+ +TG+C C G+ +C+ CL
Sbjct: 824 HLQGSASAFCDAITGQCHCFQGIYARQCDRCL 855
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 53 QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVR--EDCEQMTGRC 110
QC+CK V G +CD C+ G++ LS A D GC C C+ G++ C+ TG C
Sbjct: 425 QCRCKLHVEGERCDVCKEGFYDLS-----AEDPYGCKSCACNPLGTIPGGNPCDSETGYC 479
Query: 111 VCKPGVKGSKCNECLDPNKKLG--PNGCMP 138
CK V G +C++CL + L +GC P
Sbjct: 480 YCKRLVTGQRCDQCLPQHWGLSNDLDGCRP 509
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 21 TLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISS 80
T GP+ GC C C+ GS C T QC C QG+ +CDRC PGYWG
Sbjct: 810 TFGFGPN--GC-KPCDCHLQGSASAFCDAITGQCHCFQGIYARQCDRCLPGYWGFP---- 862
Query: 81 YAPDIDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNECL 125
C C C+ DC+ +TG C+ C+ G C CL
Sbjct: 863 ------SCQPCQCNGHAL---DCDTVTGECLSCQDYTTGHNCERCL 899
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 16/116 (13%)
Query: 32 PSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLK 90
P C N + +AC ++T +C KC G C C+ GY+G + C K
Sbjct: 975 PCQCHHNIDTTDPEACDKETGRCLKCLYHTEGDHCQLCQYGYYGDALRQD-------CRK 1027
Query: 91 CGCSQFGSVRE-------DCEQMTGRCVCKPGVKGSKCNECLDPNKKLGP-NGCMP 138
C C+ G+V+E C++ TG+C C P V G C+ C +L GC P
Sbjct: 1028 CVCNYLGTVKEHCNGSDCHCDKATGQCSCLPNVIGQNCDRCAPNTWQLASGTGCGP 1083
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 25/50 (50%)
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP 138
L C C GS+ C+ G+C C+P V G CN C GPNGC P
Sbjct: 771 LACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPNGCKP 820
Score = 30.0 bits (66), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSY 81
C C+ G+ ++C ED+ QC C + G +C+ E GY+ + + Y
Sbjct: 510 CDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNEVESGYY-FTTLDHY 555
>sp|Q60675|LAMA2_MOUSE Laminin subunit alpha-2 OS=Mus musculus GN=Lama2 PE=1 SV=1
Length = 3106
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 51/94 (54%), Gaps = 13/94 (13%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C CN GS C E + QC C+ GV G KCDRC GY+ + GC+ C CS
Sbjct: 963 CNCNSFGSKSFDC-EASGQCWCQPGVAGKKCDRCAHGYFNFQE--------GGCIACDCS 1013
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPN 128
G+ +C+ TG+C+C P G KC+ECL PN
Sbjct: 1014 HLGN---NCDPKTGQCICPPNTTGEKCSECL-PN 1043
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 63/137 (45%), Gaps = 18/137 (13%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
+G Y + C D ++G + K C C+ GS + C T QC+C+ V
Sbjct: 890 TGRYCELCADGYFGDAVNTKNC----------QPCRCDINGSFSEDCHTRTGQCECRPNV 939
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSK 120
G CD C+P +GL GCL C C+ FGS DCE +G+C C+PGV G K
Sbjct: 940 QGRHCDECKPETFGLQLGR-------GCLPCNCNSFGSKSFDCE-ASGQCWCQPGVAGKK 991
Query: 121 CNECLDPNKKLGPNGCM 137
C+ C GC+
Sbjct: 992 CDRCAHGYFNFQEGGCI 1008
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ LG+ C T QC C G KC C P WG S ++ GC C CS
Sbjct: 1010 CDCSHLGNN---CDPKTGQCICPPNTTGEKCSECLPNTWGHSIVT-------GCKVCNCS 1059
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
GS+ C TG+C C P G KC+EC
Sbjct: 1060 TVGSLASQCNVNTGQCSCHPKFSGMKCSEC 1089
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 45/99 (45%), Gaps = 21/99 (21%)
Query: 35 CGCNKLGSTEDACIEDTE---------QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
C C+ GS + C++D + C CK G GG+ CDRC GY G PD
Sbjct: 410 CHCDPTGSLSEVCVKDEKYAQRGLKPGSCHCKTGFGGVNCDRCVRGYHGY-------PD- 461
Query: 86 DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C C CS GS ED G C CK V+G C+ C
Sbjct: 462 --CQPCNCSGLGSTNED--PCVGPCSCKENVEGEDCSRC 496
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 48 IEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG--CLKCGCSQFGSVREDCEQ 105
+ED C +G G C+RC PGY G +P G C +C C +GS+ C++
Sbjct: 1485 LEDYRCTACPRGYEGQYCERCAPGYTG-------SPSSPGGSCQECECDPYGSLPVPCDR 1537
Query: 106 MTGRCVCKPGVKGSKCNEC 124
+TG C C+PG G KC+ C
Sbjct: 1538 VTGLCTCRPGATGRKCDGC 1556
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
CK G G C+ C GY+G A + C C C GS EDC TG+C C+P
Sbjct: 885 CKPGTTGRYCELCADGYFG------DAVNTKNCQPCRCDINGSFSEDCHTRTGQCECRPN 938
Query: 116 VKGSKCNEC 124
V+G C+EC
Sbjct: 939 VQGRHCDEC 947
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 19/100 (19%)
Query: 34 TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISS---YAPDIDGCL- 89
C C+ +GS C +T QC C G+KC C G+W + + P D
Sbjct: 1055 VCNCSTVGSLASQCNVNTGQCSCHPKFSGMKCSECSRGHWNYPLCTLCDCFLPGTDATTC 1114
Query: 90 -----KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
KC CS TG+C CK V+G C+ C
Sbjct: 1115 DLETRKCSCS----------DQTGQCSCKVNVEGVHCDRC 1144
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 9/61 (14%)
Query: 35 CGCNKLGST-EDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C C+ LGST ED C+ C CK+ V G C RC+ G++ L + + GC +C C
Sbjct: 465 CNCSGLGSTNEDPCVG---PCSCKENVEGEDCSRCKSGFFNLQEDNQ-----KGCEECFC 516
Query: 94 S 94
S
Sbjct: 517 S 517
Score = 30.8 bits (68), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 43/104 (41%), Gaps = 18/104 (17%)
Query: 43 TEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG--CLKCGCSQFGSVR 100
T+ D E C+C G G C+ C P + ++ I G C C C
Sbjct: 709 TDRRIATDVEVCQCPPGYSGSSCETCWPRHRRVNGT------IFGGICEPCQCFAHA--- 759
Query: 101 EDCEQMTGRCV-CKPGVKGSKCNECL-----DPNKKLGPNGCMP 138
E C+ +TG C+ CK G CNECL DP + P C P
Sbjct: 760 EACDDITGECLNCKDHTGGPYCNECLPGFYGDPTRG-SPEDCQP 802
Score = 30.0 bits (66), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 52 EQCKCKQGVGGLKCDRCEPGYWGLSKI---SSYAPDIDGCLKCGCSQFGSVREDCEQMTG 108
E+C C G GL C+ C PG++ L + P + C+ C C+ S C+ T
Sbjct: 1374 ERCDCPPGYSGLSCETCAPGFYRLRSEPGGRTPGPTLGTCVPCQCNGHSS---QCDPETS 1430
Query: 109 RCV-CKPGVKGSKCNECLDPNKKLGPNGCMPGM 140
C C+ G C C LG G + G+
Sbjct: 1431 VCQNCQHHTAGDFCERC-----ALGYYGIVRGL 1458
>sp|P02468|LAMC1_MOUSE Laminin subunit gamma-1 OS=Mus musculus GN=Lamc1 PE=1 SV=2
Length = 1607
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 63/140 (45%), Gaps = 16/140 (11%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTED--ACIEDTEQCKCKQ 58
+G Y C + ++G LA P+ A C CN G+ + +C T QC+C
Sbjct: 855 AGFYCDRCKEGFFG-----NPLA--PNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLP 907
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
V G C C+PGY+ L GC +C C GS C+ TG+C C+PG+ G
Sbjct: 908 HVSGRDCGTCDPGYYNLQSGQ-------GCERCDCHALGSTNGQCDIRTGQCECQPGITG 960
Query: 119 SKCNECLDPNKKLGPNGCMP 138
C C + GP GC P
Sbjct: 961 QHCERCETNHFGFGPEGCKP 980
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 53/109 (48%), Gaps = 13/109 (11%)
Query: 33 STCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
S C C+ +GS C + +C CK GV G KCDRC+PG+ L++ GC C
Sbjct: 394 SPCHCSPVGSLSTQC-DSYGRCSCKPGVMGDKCDRCQPGFHSLTEA--------GCRPCS 444
Query: 93 CSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKL---GPNGCMP 138
C GS E C TGRCVCK V+G C C L P GC P
Sbjct: 445 CDLRGSTDE-CNVETGRCVCKDNVEGFNCERCKPGFFNLESSNPKGCTP 492
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ LGST C T QC+C+ G+ G C+RCE ++G + P+ GC C C
Sbjct: 933 CDCHALGSTNGQCDIRTGQCECQPGITGQHCERCETNHFG------FGPE--GCKPCDCH 984
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
GS+ C+ GRC C+ G G++C++C
Sbjct: 985 HEGSLSLQCKD-DGRCECREGFVGNRCDQC 1013
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
C+ G KC+RC ++ L + + C C CS GS+ C+ GRC CKPG
Sbjct: 368 CRDNTDGAKCERCRENFFRLG-------NTEACSPCHCSPVGSLSTQCDSY-GRCSCKPG 419
Query: 116 VKGSKCNECLDPNKKLGPNGCMP 138
V G KC+ C L GC P
Sbjct: 420 VMGDKCDRCQPGFHSLTEAGCRP 442
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 55 KCKQGVGGLKCDRCEPGYWGLSKISSYAPD-IDGCLKCGCSQFGSVRED--CEQMTGRCV 111
KC G CDRC+ G++G + AP+ D C C C+ +G+V++ C +TG+C
Sbjct: 849 KCIYNTAGFYCDRCKEGFFG----NPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQ 904
Query: 112 CKPGVKGSKCNECLDP 127
C P V G C C DP
Sbjct: 905 CLPHVSGRDCGTC-DP 919
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 29 AGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
AGC C C+ GST D C +T +C CK V G C+RC+PG++ L + + GC
Sbjct: 438 AGC-RPCSCDLRGST-DECNVETGRCVCKDNVEGFNCERCKPGFFNLE-----SSNPKGC 490
Query: 89 LKCGCSQFGSV 99
C C SV
Sbjct: 491 TPCFCFGHSSV 501
Score = 34.3 bits (77), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Query: 51 TEQCKCKQGVGGLKCDRCEPGYWGLS-KISSYAPDIDGCLKCGCSQFGSVREDCEQMTGR 109
E C C G GG C+ C PGY + + Y+P C+ C C+ E C+ TG
Sbjct: 685 VESCTCPVGYGGQFCETCLPGYRRETPSLGPYSP----CVLCTCNGHS---ETCDPETGV 737
Query: 110 CVCKPGVKGSKCNECLD 126
C C+ G C +C D
Sbjct: 738 CDCRDNTAGPHCEKCSD 754
Score = 30.4 bits (67), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C C+ GS C +D +C+C++G G +CD+CE Y+
Sbjct: 981 CDCHHEGSLSLQCKDDG-RCECREGFVGNRCDQCEENYF 1018
>sp|Q8K3K1|USH2A_RAT Usherin OS=Rattus norvegicus GN=Ush2a PE=1 SV=1
Length = 1512
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 35 CGCNKLGSTE--DACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
C CN G+ + C ++ QC CK V GL+CDRC G+ L +++ DGC C
Sbjct: 690 CDCNPSGTVDGDITCHHNSGQCSCKANVIGLRCDRCSFGFKFLRSLNA-----DGCEPCH 744
Query: 93 CSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C+ GSV + C+ ++G+CVCK KG +C+ C
Sbjct: 745 CNLHGSVNQLCDPLSGQCVCKKEAKGLRCDVC 776
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
Query: 34 TCGCNKLGSTE-DACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
C CN+ G+ C +T QC CK VGG +C C+ GY+ L + S+ CL C
Sbjct: 790 VCDCNRAGTQAGTVCDAETGQCVCKPSVGGRRCSECKEGYFNLRQNDSHL-----CLPCN 844
Query: 93 CSQFGSVRED--CEQMTGRCVCKPGVKGSKCNECLDPNKKL---GPNGC 136
C + G+V C++ TG+C CK GV G +C++C L P GC
Sbjct: 845 CEKTGTVNGSLLCDKSTGQCPCKLGVTGLRCHQCKPHRFNLTMDNPQGC 893
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C CN GS C + QC CK+ GL+CD C ++GL C C C+
Sbjct: 743 CHCNLHGSVNQLCDPLSGQCVCKKEAKGLRCDVCRENFYGLP--------WSACEVCDCN 794
Query: 95 QFGS-VREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNG---CMP 138
+ G+ C+ TG+CVCKP V G +C+EC + L N C+P
Sbjct: 795 RAGTQAGTVCDAETGQCVCKPSVGGRRCSECKEGYFNLRQNDSHLCLP 842
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 18/140 (12%)
Query: 6 KSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDT--EQCKCKQGVGGL 63
+SC D +Y + + P + C CN+ G+ + + D +QC CK+ V G
Sbjct: 614 ESCQDYFY------RPIGADPADPEVCKHCDCNRDGTRNGSLLCDLVGDQCDCKRRVSGR 667
Query: 64 KCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED--CEQMTGRCVCKPGVKGSKC 121
+C RC G++GL + D D C C C+ G+V D C +G+C CK V G +C
Sbjct: 668 RCFRCHIGFYGLQAL-----DPDCCRPCDCNPSGTVDGDITCHHNSGQCSCKANVIGLRC 722
Query: 122 NEC---LDPNKKLGPNGCMP 138
+ C + L +GC P
Sbjct: 723 DRCSFGFKFLRSLNADGCEP 742
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 35 CGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
C C K G+ + C + T QC CK GV GL+C +C+P + L+ + GC C
Sbjct: 843 CNCEKTGTVNGSLLCDKSTGQCPCKLGVTGLRCHQCKPHRFNLT-----MDNPQGCQACD 897
Query: 93 CSQFGSVR-EDCEQMTGRCVCKPGVKGSKCNEC 124
C G++ C+ ++G+C+C P + +C +C
Sbjct: 898 CDSLGTLLGSMCDPVSGQCLCLPHRQERRCVQC 930
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 54/138 (39%), Gaps = 8/138 (5%)
Query: 25 GPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQ-GVGGLKCDRCEPGYWGLSKISSYAP 83
P NA C C+ + + C T C C GL +C+ Y+ + P
Sbjct: 937 SPSNATGCLPCLCHTVATKNCICNSVTGHCYCPDPSTTGLSWHQCQDRYF------RFDP 990
Query: 84 DIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVK 143
C C C G+ C+ +TG+C CK V GSKC+ C+ L N +
Sbjct: 991 LTGRCRPCHCHVAGASNGTCDAVTGQCFCKEFVTGSKCDTCVPGASHLDVNNLL-ACSKT 1049
Query: 144 PCNGEPPVINLQTGVELD 161
P PP +Q+ ++
Sbjct: 1050 PSQQPPPRGRVQSSSAIN 1067
>sp|Q8BH27|MEGF9_MOUSE Multiple epidermal growth factor-like domains protein 9 OS=Mus
musculus GN=Megf9 PE=2 SV=1
Length = 600
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 17 PDNKTLAQGPDNAGCPSTCGCNKLGSTE-DACIEDTEQCKCKQGVGGLKCDRCEPGYWGL 75
P + + P + C C+++GS + C + T QC C G GL CD C+ G++
Sbjct: 184 PPTAPVTEAPTSPPPEHMCNCSEVGSLDVKRCNQTTGQCDCHVGYQGLHCDTCKEGFY-- 241
Query: 76 SKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNG 135
+ CL C CS G+V C +G C CK GV GS C++C D + G G
Sbjct: 242 -----LNHTVGLCLPCHCSPHGAVSILCNS-SGNCQCKVGVTGSMCDKCQDGHYGFGKTG 295
Query: 136 CMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
C+P CN ++ TG L+C + E C
Sbjct: 296 CLPCQ----CNNRSDSCDVHTGACLNCQENSKGEHC 327
>sp|P11047|LAMC1_HUMAN Laminin subunit gamma-1 OS=Homo sapiens GN=LAMC1 PE=1 SV=3
Length = 1609
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 63/140 (45%), Gaps = 16/140 (11%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGST--EDACIEDTEQCKCKQ 58
+G Y C D ++G LA P+ A C CN G+ + +C T QC+C
Sbjct: 857 AGFYCDRCKDGFFG-----NPLA--PNPADKCKACNCNLYGTMKQQSSCNPVTGQCECLP 909
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
V G C C+PG++ L GC +C C GS C+ TG+C C+PG+ G
Sbjct: 910 HVTGQDCGACDPGFYNLQSGQ-------GCERCDCHALGSTNGQCDIRTGQCECQPGITG 962
Query: 119 SKCNECLDPNKKLGPNGCMP 138
C C + GP GC P
Sbjct: 963 QHCERCEVNHFGFGPEGCKP 982
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 58/115 (50%), Gaps = 14/115 (12%)
Query: 27 DNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
+N C S+C C+ +GS C + +C CK GV G KCDRC+PG+ L++
Sbjct: 391 NNEAC-SSCHCSPVGSLSTQC-DSYGRCSCKPGVMGDKCDRCQPGFHSLTEA-------- 440
Query: 87 GCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKL---GPNGCMP 138
GC C C GS+ E C TGRCVCK V+G C C L P GC P
Sbjct: 441 GCRPCSCDPSGSIDE-CNIETGRCVCKDNVEGFNCERCKPGFFNLESSNPRGCTP 494
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ LGST C T QC+C+ G+ G C+RCE ++G + P+ GC C C
Sbjct: 935 CDCHALGSTNGQCDIRTGQCECQPGITGQHCERCEVNHFG------FGPE--GCKPCDCH 986
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
GS+ C+ GRC C+ G G++C++C
Sbjct: 987 PEGSLSLQCKD-DGRCECREGFVGNRCDQC 1015
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
C+ G C+RC ++ L + + C C CS GS+ C+ GRC CKPG
Sbjct: 370 CQDNTDGAHCERCRENFFRLG-------NNEACSSCHCSPVGSLSTQCDSY-GRCSCKPG 421
Query: 116 VKGSKCNECLDPNKKLGPNGCMP 138
V G KC+ C L GC P
Sbjct: 422 VMGDKCDRCQPGFHSLTEAGCRP 444
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 55 KCKQGVGGLKCDRCEPGYWGLSKISSYAPD-IDGCLKCGCSQFGSVRED--CEQMTGRCV 111
KC G CDRC+ G++G + AP+ D C C C+ +G++++ C +TG+C
Sbjct: 851 KCIYNTAGFYCDRCKDGFFG----NPLAPNPADKCKACNCNLYGTMKQQSSCNPVTGQCE 906
Query: 112 CKPGVKGSKCNECLDP 127
C P V G C C DP
Sbjct: 907 CLPHVTGQDCGAC-DP 921
Score = 37.4 bits (85), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 29 AGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
AGC C C+ GS ++ IE T +C CK V G C+RC+PG++ L + + GC
Sbjct: 440 AGC-RPCSCDPSGSIDECNIE-TGRCVCKDNVEGFNCERCKPGFFNLE-----SSNPRGC 492
Query: 89 LKCGCSQFGSV 99
C C SV
Sbjct: 493 TPCFCFGHSSV 503
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 43/110 (39%), Gaps = 23/110 (20%)
Query: 18 DNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLS- 76
D+ TLA G P+T E C C G GG C+ C GY +
Sbjct: 669 DDVTLASARPGPGVPATW---------------VESCTCPVGYGGQFCEMCLSGYRRETP 713
Query: 77 KISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
+ Y+P C+ C C+ E C+ TG C C+ G C +C D
Sbjct: 714 NLGPYSP----CVLCACNGHS---ETCDPETGVCNCRDNTAGPHCEKCSD 756
>sp|Q61087|LAMB3_MOUSE Laminin subunit beta-3 OS=Mus musculus GN=Lamb3 PE=2 SV=2
Length = 1168
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 77/158 (48%), Gaps = 20/158 (12%)
Query: 35 CGCNKLGSTEDA-CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C C+ G+ + A C T QC CK+ V G +CD C+PG+ GL+ + GC C C
Sbjct: 376 CECDPDGAVQGAPCDRLTGQCVCKEYVQGERCDLCKPGFTGLT-----FANPKGCHACDC 430
Query: 94 SQFGSVRED--CEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN-GCMPGMEVKPCNGEPP 150
S G+ R+D CE+ TGRC+C P V G KC++C + KL GC P P N
Sbjct: 431 SILGA-RKDMPCEEETGRCLCLPNVVGPKCDQCAPSHWKLASGLGCEP-CACDPRNSLSS 488
Query: 151 VINLQTGV--------ELDCGSGANREDCPSDAYCHIT 180
N TG L C S A R+ CP Y H+
Sbjct: 489 QCNQFTGQCPCREGFGGLTCSSAAIRQ-CPDQTYGHVA 525
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P + LA G GC C C+ S C + T QC C++G GGL C
Sbjct: 462 CAPSHWKLASG---LGC-EPCACDPRNSLSSQCNQFTGQCPCREGFGGLTCSSA-----A 512
Query: 75 LSK--ISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
+ + +Y GC C C G+ C++ +GRC+C+PG G +C++C
Sbjct: 513 IRQCPDQTYGHVATGCRACDCDFRGTEGPGCDKASGRCLCRPGFTGPRCDQC 564
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVR-EDCEQMTGRCVCKP 114
C+ G C+RC+ Y+ + S AP + C+ C C G+V+ C+++TG+CVCK
Sbjct: 343 CRDHTEGKNCERCQLHYFRNRRPS--APIHETCIPCECDPDGAVQGAPCDRLTGQCVCKE 400
Query: 115 GVKGSKCNEC 124
V+G +C+ C
Sbjct: 401 YVQGERCDLC 410
>sp|O15230|LAMA5_HUMAN Laminin subunit alpha-5 OS=Homo sapiens GN=LAMA5 PE=1 SV=8
Length = 3695
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 11/90 (12%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ G +D C DT QC+C+ G G CDRC PGY+ C CGCS
Sbjct: 541 CQCSSPGVADDRCDPDTGQCRCRVGFEGATCDRCAPGYFHFPL----------CQLCGCS 590
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
G++ E C++ GRC+C+P G C+ C
Sbjct: 591 PAGTLPEGCDE-AGRCLCQPEFAGPHCDRC 619
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 34 TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
+C L + A E C C+ V G CDRC+PG+WGLS + +GC +C C
Sbjct: 724 SCHPAGLAPVDPALPEAQVPCMCRAHVEGPSCDRCKPGFWGLSP-----SNPEGCTRCSC 778
Query: 94 SQFGSV--REDCEQMTGRCVCKPGVKGSKCNECLD 126
G++ +C+ TG+C CKP V G C C D
Sbjct: 779 DLRGTLGGVAECQPGTGQCFCKPHVCGQACASCKD 813
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 18/107 (16%)
Query: 26 PDNAGCPSTCGCNK--------LGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSK 77
P GC GC + T+ C D+ QCKC+ V G +CD C PG+ G +
Sbjct: 1514 PQTFGCHPLVGCEECNCSGPGIQELTDPTCDTDSGQCKCRPNVTGRRCDTCSPGFHGYPR 1573
Query: 78 ISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C C C + G+ C+ +TG+C CK V+G KC++C
Sbjct: 1574 ----------CRPCDCHEAGTAPGVCDPLTGQCYCKENVQGPKCDQC 1610
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 16/104 (15%)
Query: 32 PSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKC 91
P CG GS C + QC C+ G G +C C PGYWGL + GC +C
Sbjct: 2069 PCACGPAAEGSE---CHPQSGQCHCRPGTMGPQCRECAPGYWGLPE--------QGCRRC 2117
Query: 92 GCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNG 135
C C+ TGRC C PG+ G +C+ C ++ P G
Sbjct: 2118 QCPG-----GRCDPHTGRCNCPPGLSGERCDTCSQQHQVPVPGG 2156
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 54 CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCK 113
C+C+ G G C C PG+ G C+ C CS GS+ C+ +G+C C+
Sbjct: 650 CRCRPGYTGTACQECSPGFHGFPS----------CVPCHCSAEGSLHAACDPRSGQCSCR 699
Query: 114 PGVKGSKCNECL 125
P V G +C+ C+
Sbjct: 700 PRVTGLRCDTCV 711
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 45 DACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCE 104
+AC + C CK GV G +CDRC+ G++G GC C C E C
Sbjct: 2031 EACDPHSGHCLCKAGVTGRRCDRCQEGHFGFDGCG-------GCRPCACGPAAEGSE-CH 2082
Query: 105 QMTGRCVCKPGVKGSKCNEC 124
+G+C C+PG G +C EC
Sbjct: 2083 PQSGQCHCRPGTMGPQCREC 2102
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 47 CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQM 106
C T QC CK V G C C+ G++GL + D GC C C G++ + CE
Sbjct: 790 CQPGTGQCFCKPHVCGQACASCKDGFFGLDQA-----DYFGCRSCRCDIGGALGQSCEPR 844
Query: 107 TGRCVCKPGVKGSKCNE 123
TG C C+P +G C+E
Sbjct: 845 TGVCRCRPNTQGPTCSE 861
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
CGC+ G+ + C ++ +C C+ G CDRC PGY G C C C
Sbjct: 587 CGCSPAGTLPEGC-DEAGRCLCQPEFAGPHCDRCRPGYHGFPN----------CQACTCD 635
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
G++ + C G C C+PG G+ C EC
Sbjct: 636 PRGALDQLC-GAGGLCRCRPGYTGTACQEC 664
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
CGC+++G+T C QC C V G C RC GYWG C C C
Sbjct: 1438 CGCHEVGATGPTCEPFGGQCPCHAHVIGRDCSRCATGYWGFPN----------CRPCDCG 1487
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINL 154
C+++TG+C+C P C C P GC P + + CN P I
Sbjct: 1488 A-----RLCDELTGQCICPPRTIPPDCLLC-QPQT----FGCHPLVGCEECNCSGPGIQE 1537
Query: 155 QTGVELDCGSG 165
T D SG
Sbjct: 1538 LTDPTCDTDSG 1548
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC-SQFGSVREDCEQMTGRCVCKP 114
C+ G+ C+RC PG++ +P + C +C C S F CE +TGRC C+P
Sbjct: 396 CQHHTTGVNCERCLPGFYRSPNHPLDSPHV--CRRCNCESDFTD--GTCEDLTGRCYCRP 451
Query: 115 GVKGSKCNECLD 126
G +C+ C +
Sbjct: 452 NFSGERCDVCAE 463
Score = 35.0 bits (79), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 12/94 (12%)
Query: 43 TEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSK---ISSYAPDID-------GCLKCG 92
T+ C + T +C C+ G +CD C G+ G S + D + C
Sbjct: 436 TDGTCEDLTGRCYCRPNFSGERCDVCAEGFTGFPSCYPTPSSSNDTREQVLPAGQIVNCD 495
Query: 93 CSQFGSVREDCEQ--MTGRCVCKPGVKGSKCNEC 124
CS G+ C + GRC+CKP +G+ C C
Sbjct: 496 CSAAGTQGNACRKDPRVGRCLCKPNFQGTHCELC 529
Score = 35.0 bits (79), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Query: 53 QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGS---VREDCEQMTGR 109
QC CK G G C+RC PG++G + C C CS G + DC+ +TG
Sbjct: 1936 QCLCKPGYAGASCERCAPGFFGNPLVLG-----SSCQPCDCSGNGDPNLLFSDCDPLTGA 1990
Query: 110 CV-CKPGVKGSKCNEC 124
C C G +C C
Sbjct: 1991 CRGCLRHTTGPRCEIC 2006
>sp|Q13751|LAMB3_HUMAN Laminin subunit beta-3 OS=Homo sapiens GN=LAMB3 PE=1 SV=1
Length = 1172
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 7/90 (7%)
Query: 51 TEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRE-DCEQMTGR 109
T QC CK+ V G +CD C+PG+ GL+ YA + GC +C C+ GS R+ C++ +GR
Sbjct: 396 TGQCVCKEHVQGERCDLCKPGFTGLT----YA-NPQGCHRCDCNILGSRRDMPCDEESGR 450
Query: 110 CVCKPGVKGSKCNECLDPNKKLGP-NGCMP 138
C+C P V G KC++C + KL GC P
Sbjct: 451 CLCLPNVVGPKCDQCAPYHWKLASGQGCEP 480
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P + LA G GC C C+ S C + T QC C++G GGL C
Sbjct: 465 CAPYHWKLASG---QGC-EPCACDPHNSLSPQCNQFTGQCPCREGFGGLMCS---AAAIR 517
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
+Y GC C C G+ C++ +GRC+C+PG+ G +C++C
Sbjct: 518 QCPDRTYGDVATGCRACDCDFRGTEGPGCDKASGRCLCRPGLTGPRCDQC 567
Score = 34.3 bits (77), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVR-EDCEQMTGRCVCKP 114
C+ G C+RC+ Y+ + + + C+ C C G+V C+ +TG+CVCK
Sbjct: 346 CRDHTEGKNCERCQLHYFRNRRPGASIQET--CISCECDPDGAVPGAPCDPVTGQCVCKE 403
Query: 115 GVKGSKCNEC 124
V+G +C+ C
Sbjct: 404 HVQGERCDLC 413
>sp|Q21313|EPI1_CAEEL Laminin-like protein epi-1 OS=Caenorhabditis elegans GN=epi-1 PE=1
SV=1
Length = 3672
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 29 AGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
AGC C C+ GS C T QC+CK GL CD+C+ GY+G D C
Sbjct: 514 AGCVE-CVCDATGSEHGNCSASTGQCECKPAYAGLSCDKCQVGYFG-----------DDC 561
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C C G+ C+Q TG+C+CK G G KC+ C
Sbjct: 562 KFCNCDPMGTEGGVCDQTTGQCLCKEGFAGDKCDRC 597
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 14/106 (13%)
Query: 20 KTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKIS 79
K + D +C C GS C + QCKCK GV G +C+RC PGY+ +
Sbjct: 1400 KIFSLTTDFNAAALSCDCVAQGSESFQCEQYGGQCKCKPGVIGRRCERCAPGYYNFPE-- 1457
Query: 80 SYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECL 125
C+KC C + + C++ TG+C C P V+G C+ C+
Sbjct: 1458 --------CIKCQC----NAGQQCDERTGQCFCPPHVEGQTCDRCV 1491
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C CN G+ D C+ + QC CK G GG C+ C GY ++ GC++C C
Sbjct: 472 CECNVNGTIGDVCLPEDGQCPCKAGFGGTFCETCADGYTNVTA---------GCVECVCD 522
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
GS +C TG+C CKP G C++C
Sbjct: 523 ATGSEHGNCSASTGQCECKPAYAGLSCDKC 552
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 53 QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVC 112
QC C+ G G++C+ CE GYW + GC KC C S+ C+ TG+C C
Sbjct: 2054 QCTCRPGATGMRCEHCEHGYWNYGE--------HGCDKCDCEADLSMGTVCDVRTGQCHC 2105
Query: 113 KPGVKGSKCNECLDPNKKLGPNGC 136
+ G GS+C++CL ++ GC
Sbjct: 2106 QEGATGSRCDQCLPSYLRIPTYGC 2129
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 35 CGCNKLGSTEDAC----IEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLK 90
C CN G T D + E C C++ V G CD+C+P +W L DGC
Sbjct: 701 CNCNPSGVTRDFQGCDKVSPGELCSCRKHVTGRICDQCKPTFWDLQYHHE-----DGCRS 755
Query: 91 CGCSQFGSVR--EDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCM 137
C C+ G++ C+ TG+C+CK G +C++C D +L M
Sbjct: 756 CDCNVNGTISGLNTCDLKTGQCMCKKNADGRRCDQCADGFYRLNSYNQM 804
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 30 GCPSTCGCNKLGSTE--DACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
GC S C CN G+ + C T QC CK+ G +CD+C G++ L+ + G
Sbjct: 752 GCRS-CDCNVNGTISGLNTCDLKTGQCMCKKNADGRRCDQCADGFYRLNSYNQM-----G 805
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
C C C G++R +C+ +G+C C+P V G +C++ ++
Sbjct: 806 CESCHCDIGGALRAECDITSGQCKCRPRVTGLRCDQPIE 844
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 33 STCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
S+C C++ GS C + C+CK V G CDRC+P +WG SK GC C
Sbjct: 1988 SSCECSQCGS--QYCDNKSGGCECKINVEGDSCDRCKPDHWGFSKCQ-------GCQGCH 2038
Query: 93 CSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGC 136
C + C G+C C+PG G +C C G +GC
Sbjct: 2039 CGT-AAFNTQCNVENGQCTCRPGATGMRCEHCEHGYWNYGEHGC 2081
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 35 CGCNKLGSTEDACIEDTE--QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
CGC+ GS + D E QC C++ +GG +CDRC G++G C C
Sbjct: 1506 CGCHPQGSEGGNLVCDPESGQCLCRESMGGRQCDRCLAGFYGFPH----------CYGCS 1555
Query: 93 CSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C++ G+ E C+ +C CK V G +C C
Sbjct: 1556 CNRAGTTEEICDATNAQCKCKENVYGGRCEAC 1587
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ +G+ C + T QC CK+G G KCDRC+ ++G C C C
Sbjct: 564 CNCDPMGTEGGVCDQTTGQCLCKEGFAGDKCDRCDIAFYGYP----------NCKACACD 613
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
G +C+ +G+C C G C++C
Sbjct: 614 GAGITSPECDATSGQCPCNGNFTGRTCDKC 643
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C CN+ G+TE+ C QCKCK+ V G +C+ C+ G + LS A + GC+ C C
Sbjct: 1554 CSCNRAGTTEEICDATNAQCKCKENVYGGRCEACKAGTFDLS-----AENPLGCVNCFC 1607
Score = 38.9 bits (89), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Query: 46 ACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQ 105
AC E+T +C+C G CD+C GY+ D C C C+ G++ + C
Sbjct: 437 ACAEETGKCECLPRFVGEDCDQCASGYY----------DAPKCKPCECNVNGTIGDVCLP 486
Query: 106 MTGRCVCKPGVKGSKCNECLD 126
G+C CK G G+ C C D
Sbjct: 487 EDGQCPCKAGFGGTFCETCAD 507
Score = 35.0 bits (79), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ G T C + QC C G CD+C G++ PD C C C
Sbjct: 610 CACDGAGITSPECDATSGQCPCNGNFTGRTCDKCAAGFYNY-------PD---CRGCECL 659
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
G+ + C+ G+C CK +G +C+ C
Sbjct: 660 LSGAKGQTCDS-NGQCYCKGNFEGERCDRC 688
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 53 QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRE--DCEQMTGRC 110
QC CK G G +CDRC G++G +IS + C C C+ ++ + C +G C
Sbjct: 1904 QCNCKPGYTGDRCDRCASGFFGHPQISG-----ESCSPCQCNGNNNLTDSRSCHPNSGDC 1958
Query: 111 -VCKPGVKGSKCNEC 124
+C+ G C C
Sbjct: 1959 YLCEQNTDGRHCESC 1973
Score = 31.6 bits (70), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
C+Q G C+ C ++G A C C CSQ GS + C+ +G C CK
Sbjct: 1961 CEQNTDGRHCESCAAWFYG------DAVTAKNCSSCECSQCGS--QYCDNKSGGCECKIN 2012
Query: 116 VKGSKCNEC 124
V+G C+ C
Sbjct: 2013 VEGDSCDRC 2021
>sp|Q2QI47|USH2A_MOUSE Usherin OS=Mus musculus GN=Ush2A PE=1 SV=2
Length = 5193
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
Query: 34 TCGCNKLGSTE-DACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
C C+K GS C +T QC CK VGG +C +C+ GY+ L Y D CL C
Sbjct: 791 VCDCSKAGSQPGTVCDTETGQCVCKPNVGGRQCSQCKAGYFNL-----YQNDSHLCLTCN 845
Query: 93 CSQFGSVR--EDCEQMTGRCVCKPGVKGSKCNEC 124
C + G+V C++ TG+C CK GV G +C++C
Sbjct: 846 CEKMGTVNGSLRCDKSTGQCPCKLGVTGLRCHQC 879
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 16 CPDNKTLAQGPDNAGCPSTCGCNKLGSTE--DACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C D Q D GC C CN G+ + C +++ QC CK V GL+C+RC G+
Sbjct: 673 CQDGFYDLQALDPDGC-RPCNCNPSGTVDGDITCHQNSGQCSCKANVIGLRCNRCNFGFK 731
Query: 74 GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
L + DGC C C+ GSV + C+ ++G+C CK KG KC+ C
Sbjct: 732 FLQSFNG-----DGCEPCQCNLHGSVNQLCDPLSGQCACKKEAKGLKCDSC 777
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 12/111 (10%)
Query: 34 TCGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKC 91
TC C K+G+ + C + T QC CK GV GL+C +C+P + L+ + GC C
Sbjct: 843 TCNCEKMGTVNGSLRCDKSTGQCPCKLGVTGLRCHQCKPHRFNLT-----MDNPQGCQAC 897
Query: 92 GCSQFGSVR-EDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN---GCMP 138
C G++ C+ ++G+C+C P +G +C +C P P+ GC+P
Sbjct: 898 DCDSLGTLPGSMCDPISGQCLCLPHRQGRRCEQC-QPGFYSSPSNATGCLP 947
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 35 CGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
C CN+ G+ + C QC CK+ V G +C +C+ G++ L + D DGC C
Sbjct: 638 CDCNRAGTRNGSLHCDPIGGQCDCKRRVSGRQCLQCQDGFYDLQAL-----DPDGCRPCN 692
Query: 93 CSQFGSVRED--CEQMTGRCVCKPGVKGSKCNEC 124
C+ G+V D C Q +G+C CK V G +CN C
Sbjct: 693 CNPSGTVDGDITCHQNSGQCSCKANVIGLRCNRC 726
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 48/118 (40%), Gaps = 13/118 (11%)
Query: 22 LAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQ-GVGGLKCDRCEPGYWGLSKISS 80
P NA C C+ G+ C T QC C G C +C+ Y+
Sbjct: 935 FYSSPSNATGCLPCLCHTAGAVSHICNSVTGQCSCHDPSTTGRSCHQCQESYF------R 988
Query: 81 YAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC------LDPNKKLG 132
+ P C C C G+ C+ +TG+C CK V GSKC+ C LD N LG
Sbjct: 989 FDPLTGRCRPCHCHVAGASNGTCDAVTGQCFCKEFVTGSKCDTCVPGASHLDVNNLLG 1046
Score = 31.2 bits (69), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVR--EDCEQMTGRCVCK 113
C+ G C+ C+ ++ APD C C C++ G+ C+ + G+C CK
Sbjct: 605 CQHHTTGRHCESCQDYFYRPVGADPAAPD--ACKLCDCNRAGTRNGSLHCDPIGGQCDCK 662
Query: 114 PGVKGSKCNECLD---PNKKLGPNGCMP 138
V G +C +C D + L P+GC P
Sbjct: 663 RRVSGRQCLQCQDGFYDLQALDPDGCRP 690
>sp|Q18823|LAM2_CAEEL Laminin-like protein lam-2 OS=Caenorhabditis elegans GN=lam-2 PE=1
SV=3
Length = 1633
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 53 QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVC 112
QC C V G++CD+C G++ ++ GC +C C GS C+ TG+C C
Sbjct: 915 QCDCLPNVIGIQCDQCAHGFYNITSGL-------GCQECNCDPLGSEGNTCDVNTGQCQC 967
Query: 113 KPGVKGSKCNECLDPNKKLGPNGCMP 138
KPGV G +C+ C D + NGC P
Sbjct: 968 KPGVTGQRCDRCADYHFGFSANGCQP 993
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
C+ G+ C++C +W P + C+ CGC++ GS+ C+ G+C CKPG
Sbjct: 375 CQGNTQGVHCEQCIANHW-------RRPGENYCVACGCNEIGSLSTQCDN-EGKCQCKPG 426
Query: 116 VKGSKCNECLDPNKKLGPNGC 136
V G C++CLD NGC
Sbjct: 427 VTGRFCDQCLDGFYDFSTNGC 447
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
CGCN++GS C ++ +C+CK GV G CD+C G++ S +GC CGC
Sbjct: 403 CGCNEIGSLSTQC-DNEGKCQCKPGVTGRFCDQCLDGFYDFS--------TNGCKNCGCE 453
Query: 95 QFGSVRED--CEQMTGRCVCKPGVKGSKCNEC 124
GS+ C+ +G C CK V+G +C++C
Sbjct: 454 TSGSLNNQPRCDSSSGSCSCKLNVEGRQCDKC 485
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 52 EQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV 111
E C+C G G C+ CE G+ + + + + C+KC C + CE +G C+
Sbjct: 700 EHCECLPGFVGQFCESCESGF---RRETKFGGPFNHCIKCDCHNHSN---SCEAESGSCI 753
Query: 112 CKPGVKGSKCNEC 124
C+ G C C
Sbjct: 754 CEHNTAGDTCERC 766
Score = 30.0 bits (66), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Query: 57 KQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSV 99
K V G +CD+C+PGY+ LS + + GC C C S+
Sbjct: 474 KLNVEGRQCDKCKPGYFDLSTENQF-----GCTPCFCFGHSSI 511
>sp|Q00174|LAMA_DROME Laminin subunit alpha OS=Drosophila melanogaster GN=LanA PE=1 SV=2
Length = 3712
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 24/125 (19%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
+G Y K C + +YG P+ K C CNK+GS + C T +CKC
Sbjct: 475 AGAYCKQCAEGYYGF-PECKA-------------CECNKIGSITNDCNVTTGECKCLTNF 520
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSK 120
GG C+RC+ GY+ C C C G+ E C + +G+C+C+ G G +
Sbjct: 521 GGDNCERCKHGYFNYPT----------CSYCDCDNQGTESEICNKQSGQCICREGFGGPR 570
Query: 121 CNECL 125
C++CL
Sbjct: 571 CDQCL 575
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 49/108 (45%), Gaps = 14/108 (12%)
Query: 26 PDNAGCPSTCGCNK----LGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSY 81
PD+ G S GC S C T C CK GV G +CDRC +W K
Sbjct: 2003 PDHYGFESGVGCRACDCGAASNSTQCDPHTGHCACKSGVTGRQCDRCAVDHWKYEK---- 2058
Query: 82 APDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNK 129
DGC C C+Q S C TG+C C PGV G +C+ C PN+
Sbjct: 2059 ----DGCTPCNCNQGYSRGFGCNPNTGKCQCLPGVIGDRCDAC--PNR 2100
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 52 EQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVR--EDCEQMTGR 109
E CKCK+ V G C+ C+P YW L+ + +GC C C G++ + C +G+
Sbjct: 698 ELCKCKERVTGRICNECKPLYWNLN-----ISNTEGCEICDCWTDGTISALDTCTSKSGQ 752
Query: 110 CVCKPGVKGSKCNECLD 126
C CKP +G +C EC D
Sbjct: 753 CPCKPHTQGRRCQECRD 769
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
Query: 34 TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
+C C+ LG+ C C C + V G +CDRC+P ++G GC C C
Sbjct: 1969 SCDCDDLGT--QTCDPFVGVCTCHENVIGDRCDRCKPDHYGFESGV-------GCRACDC 2019
Query: 94 SQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP 138
S C+ TG C CK GV G +C+ C + K +GC P
Sbjct: 2020 GA-ASNSTQCDPHTGHCACKSGVTGRQCDRCAVDHWKYEKDGCTP 2063
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 15/107 (14%)
Query: 35 CGCNKLGSTE--DACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
C CN +G C C+C+Q + G CD C GY+ C +C
Sbjct: 1466 CACNPMGIANGNSQCDLFNGTCECRQNIEGRACDVCSNGYFNFPH----------CEQCS 1515
Query: 93 CSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKL---GPNGC 136
C + G+ E C+++ G C CK V G C++C+D L P+GC
Sbjct: 1516 CHKPGTELEVCDKIDGACFCKKNVVGRDCDQCVDGTYNLQESNPDGC 1562
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Query: 33 STCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
S C C+ G+ + C + + QC C++G GG +CD+C PG++ PD C C
Sbjct: 539 SYCDCDNQGTESEICNKQSGQCICREGFGGPRCDQCLPGFYNY-------PD---CKPCN 588
Query: 93 CSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
CS GS C+ TG+C C G +C C
Sbjct: 589 CSSTGSSAITCDN-TGKCNCLNNFAGKQCTLC 619
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 42 STEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRE 101
S D C + QC CK G +C C G + L S + GC C C GS +
Sbjct: 741 SALDTCTSKSGQCPCKPHTQGRRCQECRDGTFDLDSASLF-----GCKDCSCDVGGSWQS 795
Query: 102 DCEQMTGRCVCKPGVKGSKCNECL 125
C++++G+C C P + G C + L
Sbjct: 796 VCDKISGQCKCHPRITGLACTQPL 819
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 12/90 (13%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ GS+ C ++T +C C G +C C GY+ SY PD CL C C
Sbjct: 587 CNCSSTGSSAITC-DNTGKCNCLNNFAGKQCTLCTAGYY------SY-PD---CLPCHCD 635
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
GS C G+C+C+P G +C+ C
Sbjct: 636 SHGSQGVSCNS-DGQCLCQPNFDGRQCDSC 664
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 36/90 (40%), Gaps = 14/90 (15%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ GST C QC+CK V C C Y+G PD C C C
Sbjct: 1375 CNCDYAGSTSFECHPFGGQCQCKPNVIERTCGACRSRYYGF-------PD---CKPCKCP 1424
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
CE TG C+C P V G C +C
Sbjct: 1425 NSAM----CEPTTGECMCPPNVIGDLCEKC 1450
Score = 34.7 bits (78), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
Query: 33 STCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
S C C+ ST C E+T C+C+ CD C GY+G C +C
Sbjct: 401 SPCQCDYFFST-GHCEEETGNCECRAAFQPPSCDSCAYGYYGYP----------NCRECE 449
Query: 93 CSQFGSVREDCEQMTG-RCVCKPGVKGSKCNECLD 126
C+ G+ CE +G +C CK G+ C +C +
Sbjct: 450 CNLNGTNGYHCEAESGQQCPCKINFAGAYCKQCAE 484
Score = 34.7 bits (78), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Query: 51 TEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSV--REDCEQMTG 108
T +C C V G C++C P +G ++ GC +C C+ G C+ G
Sbjct: 1433 TGECMCPPNVIGDLCEKCAPNTYGFHQVI-------GCEECACNPMGIANGNSQCDLFNG 1485
Query: 109 RCVCKPGVKGSKCNEC 124
C C+ ++G C+ C
Sbjct: 1486 TCECRQNIEGRACDVC 1501
Score = 34.3 bits (77), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
C+ G+ C++C+P Y+ + + D C C C F S CE+ TG C C+
Sbjct: 370 CQHNTVGINCNKCKPKYY--RPKGKHWNETDVCSPCQCDYFFSTGH-CEEETGNCECRAA 426
Query: 116 VKGSKCNEC 124
+ C+ C
Sbjct: 427 FQPPSCDSC 435
Score = 31.6 bits (70), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 55 KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC------SQFGS---VREDCEQ 105
KC+ G G C+RC GY+G ++ P C+ C C + F + + E +Q
Sbjct: 1827 KCQHGTEGDHCERCVSGYYG--NATNGTP--GDCMICACPLPFDSNNFATSCEISESGDQ 1882
Query: 106 MTGRCVCKPGVKGSKCNEC 124
+ C CKPG G +C C
Sbjct: 1883 I--HCECKPGYTGPRCESC 1899
>sp|Q9V5N8|STAN_DROME Protocadherin-like wing polarity protein stan OS=Drosophila
melanogaster GN=stan PE=1 SV=4
Length = 3579
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 23/138 (16%)
Query: 14 GCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQG------VGGLKCDR 67
G C N +L +G D C CN D C ++ +Q C G G +CD
Sbjct: 2011 GVCRANTSLPRGYD-------CECNSSSRHGDYCEKELQQ-PCPGGWWGERVCGPCRCDL 2062
Query: 68 CEPGYWGLSKISSYA---------PDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
+ + +K + P+ CL C C GS C +TG+C C+ GV G
Sbjct: 2063 AQGYHPDCNKTTGQCYCKTNHYQPPNETACLSCDCYSIGSFSGACNPLTGQCECREGVIG 2122
Query: 119 SKCNECLDPNKKLGPNGC 136
+C+ C +P ++ +GC
Sbjct: 2123 RRCDSCSNPYAEVTLSGC 2140
>sp|P15215|LAMC1_DROME Laminin subunit gamma-1 OS=Drosophila melanogaster GN=LanB2 PE=2 SV=2
Length = 1639
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 12/109 (11%)
Query: 35 CGCNKLGSTEDA-----CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
C C + G+ +D C + T QC+CK V G C C+PGY+ + +GC
Sbjct: 902 CSCYEAGTEQDEQSITRCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSG-------NGCE 954
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP 138
C C GS C++ +G+C C+PGV G +C++C + GC P
Sbjct: 955 NCLCDPVGSYNSTCDRYSGQCHCRPGVMGQRCDQCENYFYGFSSEGCKP 1003
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 54/106 (50%), Gaps = 17/106 (16%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ +GS C +C+CK GV G KCDRC+ Y+ + P GC +CGC
Sbjct: 414 CACDPVGSRSLQC-NSHGKCQCKPGVTGDKCDRCDNNYY------QFGPH--GCQQCGCD 464
Query: 95 QFGSVRED--CEQMTGRCVCKPGVKGSKCNEC------LDPNKKLG 132
GS + C+ TG C CK V+G +CNEC LD N + G
Sbjct: 465 SGGSHQNTPACDTETGICFCKENVEGRRCNECKPGFFNLDKNNRFG 510
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ +GS C + QC C+ GV G +CD+CE ++G S +GC C C
Sbjct: 956 CLCDPVGSYNSTCDRYSGQCHCRPGVMGQRCDQCENYFYGFSS--------EGCKPCECD 1007
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCM 137
+ GS C+Q G+C C V+G +C+ C + NK GC+
Sbjct: 1008 ESGSKGFQCDQ-NGQCPCNDNVEGRRCDRCKE-NKYDRHRGCI 1048
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
C++ G C+RC+ + Y D C+ C C GS C G+C CKPG
Sbjct: 387 CRENRDGPNCERCKENF--------YMRDDGYCVNCACDPVGSRSLQCNSH-GKCQCKPG 437
Query: 116 VKGSKCNECLDPNKKLGPNGCM 137
V G KC+ C + + GP+GC
Sbjct: 438 VTGDKCDRCDNNYYQFGPHGCQ 459
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 55 KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED-----CEQMTGR 109
KC G CD+C G++G A C +C C + G+ +++ C+Q+TG+
Sbjct: 870 KCIHNTAGEHCDQCLSGHFG----DPLALPHGRCDRCSCYEAGTEQDEQSITRCDQVTGQ 925
Query: 110 CVCKPGVKGSKCNEC 124
C CKP V G C EC
Sbjct: 926 CQCKPNVIGRDCGEC 940
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 20/100 (20%)
Query: 18 DNKTLAQGPDNAGCPSTCGCNKLGSTED--ACIEDTEQCKCKQGVGGLKCDRCEPGYWGL 75
DN GP GC CGC+ GS ++ AC +T C CK+ V G +C+ C+PG++ L
Sbjct: 447 DNNYYQFGPH--GC-QQCGCDSGGSHQNTPACDTETGICFCKENVEGRRCNECKPGFFNL 503
Query: 76 SKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
K + + GC C C +G T C+ PG
Sbjct: 504 DKNNRF-----GCTPCFC--YGH--------TSECMTAPG 528
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Query: 52 EQCKCKQGVGGLKCDRCEPGY-WGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRC 110
EQC C +G G C+ C PGY ++ + P C+ C C + C+ TGRC
Sbjct: 708 EQCTCPEGYLGQFCESCAPGYRHSPARGGPFMP----CIPCDCHGHADI---CDSETGRC 760
Query: 111 VCKPGVKGSKCNEC 124
+C+ G C++C
Sbjct: 761 ICQHNTHGDNCDQC 774
Score = 30.4 bits (67), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 45 DACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCE 104
D C +T +C C+ G CD+C G++G ++ + C +C C G+ + E
Sbjct: 751 DICDSETGRCICQHNTHGDNCDQCAKGFYG----NALGGTPNDCKRCPCPNDGACLQINE 806
Query: 105 QMTGRCVCKPGVKGSKCNECLD 126
C G GS+C +C D
Sbjct: 807 DTVICTECPKGYFGSRCEQCSD 828
>sp|Q61001|LAMA5_MOUSE Laminin subunit alpha-5 OS=Mus musculus GN=Lama5 PE=1 SV=4
Length = 3718
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 18/107 (16%)
Query: 26 PDNAGCPSTCGCNK--------LGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSK 77
P + GC GC + T+ C D+ QC+C+ V G +CD C PG++G
Sbjct: 1519 PQSFGCHPLVGCEECNCSGPGVQELTDPTCDMDSGQCRCRPNVAGRRCDTCAPGFYGYPS 1578
Query: 78 ISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C C C + G++ C+ +TG+C CK V+GS+C++C
Sbjct: 1579 ----------CRPCDCHEAGTMASVCDPLTGQCHCKENVQGSRCDQC 1615
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ G C ++ QC C+ G G +CD C GY+ C CGCS
Sbjct: 547 CQCSSPGVANSLCDPESGQCMCRTGFEGDRCDHCALGYFHFPL----------CQLCGCS 596
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECL 125
G++ E C++ GRC C+PG G C+ CL
Sbjct: 597 PAGTLPEGCDE-AGRCQCRPGFDGPHCDRCL 626
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 34 TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
+C L A E C C+ V G CDRC+PGYWGLS A + +GC +C C
Sbjct: 730 SCHPAGLAPANPALPETQAPCMCRAHVEGPSCDRCKPGYWGLS-----ASNPEGCTRCSC 784
Query: 94 SQFGSVREDCE-QMTGRCVCKPGVKGSKCNECLD 126
G++ E Q G+C CK V G C C D
Sbjct: 785 DPRGTLGGVTECQGNGQCFCKAHVCGKTCAACKD 818
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 13/78 (16%)
Query: 47 CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQM 106
C + QC C+ G G +C C PGYWGL + GC +C C R C+
Sbjct: 2083 CHPQSGQCHCQPGTTGPQCLECAPGYWGLPE--------KGCRRCQCP-----RGHCDPH 2129
Query: 107 TGRCVCKPGVKGSKCNEC 124
TG C C PG+ G +C+ C
Sbjct: 2130 TGHCTCPPGLSGERCDTC 2147
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 12/90 (13%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
CGC+ G+ + C ++ +C+C+ G G CDRC PGY G PD C C C
Sbjct: 593 CGCSPAGTLPEGC-DEAGRCQCRPGFDGPHCDRCLPGYHGY-------PD---CHACACD 641
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
G++ + C + G C C+PG G+ C EC
Sbjct: 642 PRGALDQQCG-VGGLCHCRPGYTGATCQEC 670
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 10/72 (13%)
Query: 54 CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCK 113
C C+ G G C C PG++G C+ C CS GS+ C+ TG+C C+
Sbjct: 656 CHCRPGYTGATCQECSPGFYGFPS----------CIPCHCSADGSLHTTCDPTTGQCRCR 705
Query: 114 PGVKGSKCNECL 125
P V G C+ C+
Sbjct: 706 PRVTGLHCDMCV 717
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 13/98 (13%)
Query: 29 AGCPSTCGCNKLGSTEDACIEDTE--QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
AG C CN G+ +AC +D +C CK G C+ C PG+ G S
Sbjct: 494 AGQIVNCDCNAAGTQGNACRKDPRLGRCVCKPNFRGAHCELCAPGFHGPS---------- 543
Query: 87 GCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C C CS G C+ +G+C+C+ G +G +C+ C
Sbjct: 544 -CHPCQCSSPGVANSLCDPESGQCMCRTGFEGDRCDHC 580
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
C + G C+RC PG++G + + C +C CS G+ E C+ +GRC+CK G
Sbjct: 1996 CLRHTTGPHCERCAPGFYGNALLPG------NCTRCDCSPCGT--ETCDPQSGRCLCKAG 2047
Query: 116 VKGSKCNECLD 126
V G +C+ CL+
Sbjct: 2048 VTGQRCDRCLE 2058
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 45 DACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCE 104
+ C + +C CK GV G +CDRC GY+G + GC C C E C
Sbjct: 2033 ETCDPQSGRCLCKAGVTGQRCDRCLEGYFGFEQC-------QGCRPCACGPAAKGSE-CH 2084
Query: 105 QMTGRCVCKPGVKGSKCNEC 124
+G+C C+PG G +C EC
Sbjct: 2085 PQSGQCHCQPGTTGPQCLEC 2104
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 53 QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVC 112
QC CK V G C C+ G++GL YA D GC C C G++ + CE TG C C
Sbjct: 801 QCFCKAHVCGKTCAACKDGFFGLD----YA-DYFGCRSCRCDVGGALGQGCEPKTGACRC 855
Query: 113 KPGVKGSKCNE 123
+P +G C+E
Sbjct: 856 RPNTQGPTCSE 866
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 17/104 (16%)
Query: 21 TLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISS 80
+L+ +N P CGC+++G+ C QC C+ V G C RC GYWG
Sbjct: 1431 SLSLFYNNGALP--CGCHEVGAVSPTCEPFGGQCPCRGHVIGRDCSRCATGYWGFPN--- 1485
Query: 81 YAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C C C C+++TG+C+C P C C
Sbjct: 1486 -------CRPCDCGA-----RLCDELTGQCICPPRTVPPDCLVC 1517
Score = 38.5 bits (88), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC-SQFGSVREDCEQMTGRCVCKP 114
C+ G+ C+RC PG++ +P + C C C S F CE +TGRC C+P
Sbjct: 401 CQHHTTGINCERCLPGFFRAPDQPLDSPHV--CRPCDCESDF--TDGTCEDLTGRCYCRP 456
Query: 115 GVKGSKCNECLD 126
G C C +
Sbjct: 457 NFTGELCAACAE 468
>sp|P15800|LAMB2_RAT Laminin subunit beta-2 OS=Rattus norvegicus GN=Lamb2 PE=2 SV=1
Length = 1801
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 58/124 (46%), Gaps = 17/124 (13%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTE--DACIEDTEQCKCKQG 59
G + C D ++G N GC C CN G+ C + C CK+
Sbjct: 449 GTRCQQCRDGFFGLSASNPR--------GC-QRCQCNSRGTVPGGTPCDSSSGTCFCKRL 499
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGS 119
V G CDRC PG+WGLS D+ GC C C G++ C++ TG+C C+P + G
Sbjct: 500 VTGDGCDRCLPGHWGLSH------DLLGCRPCDCDVGGALDPQCDEATGQCPCRPHMIGR 553
Query: 120 KCNE 123
+C +
Sbjct: 554 RCEQ 557
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ GS C QC+CK GV G +CD C GY+G GC C CS
Sbjct: 786 CQCDPQGSLSSECNPHGGQCRCKPGVVGRRCDACATGYYGFGPA--------GCQACQCS 837
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
G++ CE +G+C+C+ G G +C+ C
Sbjct: 838 PDGALSALCEGTSGQCLCRTGAFGLRCDHC 867
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ + C E T QC C G GG C C+ +WG + C C C
Sbjct: 1098 CACHPSRARGPTCNEFTGQCHCHAGFGGRTCSECQELHWGDPGLQ--------CRACDCD 1149
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
G + C + TG C C+PGV G +C++C
Sbjct: 1150 PRGIDKPQCHRSTGHCSCRPGVSGVRCDQC 1179
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 55/129 (42%), Gaps = 21/129 (16%)
Query: 25 GPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
G D CPST C+ C T QC C V GL CDRC P +W +
Sbjct: 1047 GTDPQRCPSTDLCH--------CDPSTGQCPCLPHVQGLSCDRCAPNFWNFTSGR----- 1093
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKP 144
GC C C + C + TG+C C G G C+EC + + PG++ +
Sbjct: 1094 --GCQPCACHPSRARGPTCNEFTGQCHCHAGFGGRTCSECQELHWG------DPGLQCRA 1145
Query: 145 CNGEPPVIN 153
C+ +P I+
Sbjct: 1146 CDCDPRGID 1154
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 53 QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVR--EDCEQMTGRC 110
QC+CK+ V G +C +C G++GLS A + GC +C C+ G+V C+ +G C
Sbjct: 440 QCRCKEHVVGTRCQQCRDGFFGLS-----ASNPRGCQRCQCNSRGTVPGGTPCDSSSGTC 494
Query: 111 VCKPGVKGSKCNECLDPNKKLGPN--GCMP 138
CK V G C+ CL + L + GC P
Sbjct: 495 FCKRLVTGDGCDRCLPGHWGLSHDLLGCRP 524
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 78 ISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGC 136
IS+ + +G L C C GS+ +C G+C CKPGV G +C+ C GP GC
Sbjct: 773 ISASSLVYNGALPCQCDPQGSLSSECNPHGGQCRCKPGVVGRRCDACATGYYGFGPAGC 831
Score = 33.5 bits (75), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 34 TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGL 75
C C+ G + C T C C+ GV G++CD+C G+ G+
Sbjct: 1145 ACDCDPRGIDKPQCHRSTGHCSCRPGVSGVRCDQCARGFSGV 1186
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 11/93 (11%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P + L+ D GC C C+ G+ + C E T QC C+ + G +C++ +PGY
Sbjct: 508 CLPGHWGLSH--DLLGC-RPCDCDVGGALDPQCDEATGQCPCRPHMIGRRCEQVQPGY-- 562
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMT 107
+ P +D G V E E++
Sbjct: 563 ------FRPFLDHLTWEAEGAHGQVLEVVERLV 589
>sp|P19137|LAMA1_MOUSE Laminin subunit alpha-1 OS=Mus musculus GN=Lama1 PE=1 SV=1
Length = 3084
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C++ GS C +T C CK V G +CD+C GY+GL GC+ C CS
Sbjct: 909 CDCHENGSLSGVCHLETGLCDCKPHVTGQQCDQCLSGYYGLDTGL-------GCVPCNCS 961
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP 138
GSV ++C + G+C C PGV G +C+ C GC P
Sbjct: 962 VEGSVSDNCTE-EGQCHCGPGVSGKQCDRCSHGFYAFQDGGCTP 1004
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 41 GSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVR 100
T++ C + +C C GLKC+ CE YWGL P+ GC C CS GS
Sbjct: 1008 AHTQNNCDPASGECLCPPHTQGLKCEECEEAYWGLD------PE-QGCQACNCSAVGSTS 1060
Query: 101 EDCEQMTGRCVCKPGVKGSKCNEC 124
C+ ++G C CK G G C++C
Sbjct: 1061 AQCDVLSGHCPCKKGFGGQSCHQC 1084
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ GS D C E+ QC C GV G +CDRC G+ YA GC C C+
Sbjct: 958 CNCSVEGSVSDNCTEEG-QCHCGPGVSGKQCDRCSHGF--------YAFQDGGCTPCDCA 1008
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGP 133
+ +C+ +G C+C P +G KC EC + L P
Sbjct: 1009 H---TQNNCDPASGECLCPPHTQGLKCEECEEAYWGLDP 1044
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
C G G C+RC GY G + + C C C+ GSV DC++ +G+CVCKPG
Sbjct: 1486 CLPGYEGQYCERCSAGYHGNPRAAG-----GSCQTCDCNPQGSVHSDCDRASGQCVCKPG 1540
Query: 116 VKGSKCNECLDPNKKLGPNGCM 137
G C +CL P L + C+
Sbjct: 1541 ATGLHCEKCL-PRHILMESDCV 1561
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 65/151 (43%), Gaps = 34/151 (22%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE-------- 52
+GI ++C+D +Y + P + C C+ +GS CI+D
Sbjct: 376 TGINCETCIDQYY------RPHKVSPYDDHPCRPCNCDPVGSLSSVCIKDDRHADLANGK 429
Query: 53 ---QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED-CEQMTG 108
QC C++G G KCDRC+ GY G C+ C C GS+ ED C +
Sbjct: 430 WPGQCPCRKGYAGDKCDRCQFGYRGFP----------NCIPCDCRTVGSLNEDPCIE--- 476
Query: 109 RCVCKPGVKGSKCNEC---LDPNKKLGPNGC 136
C+CK V+G C+ C K+ P GC
Sbjct: 477 PCLCKKNVEGKNCDRCKPGFYNLKERNPEGC 507
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 33/149 (22%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVG 61
G+ + C ++++G P+ GC + C C+ +GST C + C CK+G G
Sbjct: 1029 GLKCEECEEAYWGLDPEQ----------GCQA-CNCSAVGSTSAQCDVLSGHCPCKKGFG 1077
Query: 62 GLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCE---------QMTGRCVC 112
G C +C GY PD C+ CGC G++ + C+ + +G C C
Sbjct: 1078 GQSCHQCSLGYRSF-------PD---CVPCGCDLRGTLPDTCDLEQGLCSCSEDSGTCSC 1127
Query: 113 KPGVKGSKCNECLDPNKKL---GPNGCMP 138
K V G +C++C L P GC P
Sbjct: 1128 KENVVGPQCSKCQAGTFALRGDNPQGCSP 1156
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 61/147 (41%), Gaps = 19/147 (12%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQG 59
SG + + C D +YG N T+ P P C N C T +C KC
Sbjct: 831 SGSWCERCADGYYG----NPTV---PGGTCVPCNCSGNVDPLEAGHCDSVTGECLKCLWN 883
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGS 119
G C+RC G++G A C C C + GS+ C TG C CKP V G
Sbjct: 884 TDGAHCERCADGFYG------DAVTAKNCRACDCHENGSLSGVCHLETGLCDCKPHVTGQ 937
Query: 120 KCNECLDPNKKLGPNGCMPGMEVKPCN 146
+C++CL G G G+ PCN
Sbjct: 938 QCDQCLS-----GYYGLDTGLGCVPCN 959
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 35 CGCNKLGS-TEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C C +GS ED CIE C CK+ V G CDRC+PG++ L + + +GC +C C
Sbjct: 461 CDCRTVGSLNEDPCIEP---CLCKKNVEGKNCDRCKPGFYNLKE-----RNPEGCSECFC 512
Query: 94 SQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNK 129
FG V C+ +T + G + + NK
Sbjct: 513 --FG-VSGVCDSLTWSISQVTNMSGWLVTDLMSTNK 545
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 41/113 (36%), Gaps = 37/113 (32%)
Query: 46 ACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCE- 104
A D E C+C QG G C+ C PGY+ +DG L FG + + CE
Sbjct: 708 AVAADVEHCECPQGYTGTSCEACLPGYY----------RVDGIL------FGGICQPCEC 751
Query: 105 -------QMTGRC-VCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEP 149
+ G C VC G C +CL PG P G P
Sbjct: 752 HGHASECDIHGICSVCTHNTTGDHCEQCL------------PGFYGTPSRGTP 792
>sp|Q61292|LAMB2_MOUSE Laminin subunit beta-2 OS=Mus musculus GN=Lamb2 PE=2 SV=2
Length = 1799
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 60/137 (43%), Gaps = 14/137 (10%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ GS C QC+CK GV G +CD C GY+G GC C CS
Sbjct: 784 CQCDPQGSLSSECSPHGGQCRCKPGVVGRRCDVCATGYYGFGPA--------GCQACQCS 835
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINL 154
G++ CE +G+C C+PG G +C+ C + G C P + CNG +
Sbjct: 836 PDGALSALCEGTSGQCPCRPGAFGLRCDHC--QRGQWGFPNCRPCV----CNGRADECDT 889
Query: 155 QTGVELDCGSGANREDC 171
TG L C E C
Sbjct: 890 HTGACLGCRDYTGGEHC 906
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 17/124 (13%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGST--EDACIEDTEQCKCKQG 59
G + C D ++G D GC C CN G+ C + C CK+
Sbjct: 449 GTRCQQCRDGFFGL--------SASDPRGC-QRCQCNSRGTVPGSSPCDSSSGTCFCKRL 499
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGS 119
V G CDRC PG+WGLS D+ GC C C G++ C++ TG+C C+ + G
Sbjct: 500 VTGHGCDRCLPGHWGLSH------DLLGCRPCDCDVGGALDPQCDEATGQCRCRQHMIGR 553
Query: 120 KCNE 123
+C +
Sbjct: 554 RCEQ 557
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ + C E T QC C G GG C C+ YWG + C C C
Sbjct: 1096 CACHPSRARGPTCNEFTGQCHCHAGFGGRTCSECQELYWGDPGLQ--------CRACDCD 1147
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
G + C + TG C C+PGV G +C++C
Sbjct: 1148 PRGIDKPQCHRSTGHCSCRPGVSGVRCDQC 1177
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 53 QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSV--REDCEQMTGRC 110
QC+CK+ V G +C +C G++GLS A D GC +C C+ G+V C+ +G C
Sbjct: 440 QCRCKEHVVGTRCQQCRDGFFGLS-----ASDPRGCQRCQCNSRGTVPGSSPCDSSSGTC 494
Query: 111 VCKPGVKGSKCNECLDPNKKLGPN--GCMP 138
CK V G C+ CL + L + GC P
Sbjct: 495 FCKRLVTGHGCDRCLPGHWGLSHDLLGCRP 524
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 41/100 (41%), Gaps = 15/100 (15%)
Query: 25 GPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
G D CPST C+ C T QC C V GL CD C P +W +
Sbjct: 1045 GTDPRRCPSTDLCH--------CDPSTGQCPCLPHVQGLNCDHCAPNFWNFTSGR----- 1091
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
GC C C + C + TG+C C G G C+EC
Sbjct: 1092 --GCQPCACHPSRARGPTCNEFTGQCHCHAGFGGRTCSEC 1129
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 30/59 (50%)
Query: 78 ISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGC 136
IS A +G L C C GS+ +C G+C CKPGV G +C+ C GP GC
Sbjct: 771 ISVSALIYNGALPCQCDPQGSLSSECSPHGGQCRCKPGVVGRRCDVCATGYYGFGPAGC 829
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C P + L+ D GC C C+ G+ + C E T QC+C+Q + G +C++ +PGY+
Sbjct: 508 CLPGHWGLSH--DLLGC-RPCDCDVGGALDPQCDEATGQCRCRQHMIGRRCEQVQPGYF 563
Score = 33.5 bits (75), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 34 TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGL 75
C C+ G + C T C C+ GV G++CD+C G+ G+
Sbjct: 1143 ACDCDPRGIDKPQCHRSTGHCSCRPGVSGVRCDQCARGFSGV 1184
Score = 30.0 bits (66), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 54 CKCKQGVGGLKCDRCEPGYWG 74
C+C++G GL+C+ C PG++G
Sbjct: 955 CQCREGYTGLRCEACAPGHFG 975
>sp|O35161|CELR1_MOUSE Cadherin EGF LAG seven-pass G-type receptor 1 OS=Mus musculus
GN=Celsr1 PE=2 SV=3
Length = 3034
Score = 57.0 bits (136), Expect = 7e-08, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 60/168 (35%), Gaps = 45/168 (26%)
Query: 8 CLDSW--YGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE-----QCKCKQGV 60
C D+W Y C D +G C C N AC+ C+C G
Sbjct: 1902 CRDTWDSYSCICD-----RGYFGKKCVDACLLNPCKHVA-ACVRSPNTPRGYSCECGPGH 1955
Query: 61 GGLKCDR-----CEPGYWG--------LSKISSYAPDI-------------------DGC 88
G C+ C G+WG + + PD D C
Sbjct: 1956 YGQYCENKVDLPCPKGWWGNPVCGPCHCAVSQGFDPDCNKTNGQCQCKENYYKPPAQDAC 2015
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGC 136
L C C GS C+ TG+C CKPGV G +CN C +P ++ GC
Sbjct: 2016 LPCDCFPHGSHSRACDMDTGQCACKPGVIGRQCNRCDNPFAEVTSLGC 2063
>sp|Q9NYQ6|CELR1_HUMAN Cadherin EGF LAG seven-pass G-type receptor 1 OS=Homo sapiens
GN=CELSR1 PE=1 SV=1
Length = 3014
Score = 57.0 bits (136), Expect = 8e-08, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 52/136 (38%), Gaps = 22/136 (16%)
Query: 4 YLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCG---CNKLGSTEDACIEDTEQCKCKQGV 60
Y+ C S YG +NK P CG C + C + QC+CK+
Sbjct: 1932 YVCECGPSHYGPYCENKLDLPCPRGWWGNPVCGPCHCAVSKGFDPDCNKTNGQCQCKENY 1991
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSK 120
L D CL C C GS C+ TG+C CKPGV G +
Sbjct: 1992 YKLLAQ-------------------DTCLPCDCFPHGSHSRTCDMATGQCACKPGVIGRQ 2032
Query: 121 CNECLDPNKKLGPNGC 136
CN C +P ++ GC
Sbjct: 2033 CNRCDNPFAEVTTLGC 2048
>sp|Q91ZI0|CELR3_MOUSE Cadherin EGF LAG seven-pass G-type receptor 3 OS=Mus musculus
GN=Celsr3 PE=2 SV=2
Length = 3301
Score = 56.6 bits (135), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 53/137 (38%), Gaps = 24/137 (17%)
Query: 4 YLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCG---CNKLGSTEDACIEDTEQCKCKQGV 60
Y C+ ++G +++ Q P TCG C+ + C + QC CK+
Sbjct: 1995 YTCDCVSGYFGQHCEHRVDQQCPRGWWGSPTCGPCNCDVHKGFDPNCNKTNGQCHCKE-- 2052
Query: 61 GGLKCDRCEPGYWGLSKISSYAP-DIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGS 119
Y P D CL C C GS C +G+C C+PG G
Sbjct: 2053 ------------------FHYRPRGSDSCLPCDCYPVGSTSRSCAPHSGQCPCRPGALGR 2094
Query: 120 KCNECLDPNKKLGPNGC 136
+CN C P ++ +GC
Sbjct: 2095 QCNSCDSPFAEVTASGC 2111
>sp|O88278|CELR3_RAT Cadherin EGF LAG seven-pass G-type receptor 3 OS=Rattus norvegicus
GN=Celsr3 PE=2 SV=1
Length = 3313
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 53/137 (38%), Gaps = 24/137 (17%)
Query: 4 YLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCG---CNKLGSTEDACIEDTEQCKCKQGV 60
Y C ++G +++ Q P TCG C+ + C + + QC CK+
Sbjct: 1997 YTCDCASGYFGQHCEHRMDQQCPRGWWGSPTCGPCNCDVHKGFDPNCNKTSGQCHCKE-- 2054
Query: 61 GGLKCDRCEPGYWGLSKISSYAP-DIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGS 119
Y P D CL C C GS C +G+C C+PG G
Sbjct: 2055 ------------------FHYRPRGSDSCLPCDCYPVGSTSRSCAPHSGQCPCRPGALGR 2096
Query: 120 KCNECLDPNKKLGPNGC 136
+CN C P ++ +GC
Sbjct: 2097 QCNSCDSPFAEVTASGC 2113
Score = 31.6 bits (70), Expect = 2.9, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 17/85 (20%)
Query: 58 QGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTG--RCVCKPG 115
Q + GL+C RC PG+ G ++D C C G+ C + G CVC+P
Sbjct: 1405 QPIAGLRC-RCPPGFTG----DFCETELDLCYSNPCRNGGA----CARREGGYTCVCRPR 1455
Query: 116 VKGSKCNECLDPNKKLGPNGCMPGM 140
G C + + C+PG+
Sbjct: 1456 FTGEDCELDTEAGR------CVPGV 1474
>sp|Q9NYQ7|CELR3_HUMAN Cadherin EGF LAG seven-pass G-type receptor 3 OS=Homo sapiens
GN=CELSR3 PE=1 SV=2
Length = 3312
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 53/137 (38%), Gaps = 24/137 (17%)
Query: 4 YLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCG---CNKLGSTEDACIEDTEQCKCKQGV 60
Y C+ ++G +++ Q P TCG C+ + C + QC CK+
Sbjct: 2006 YTCDCVGGYFGHHCEHRMDQQCPRGWWGSPTCGPCNCDVHKGFDPNCNKTNGQCHCKE-- 2063
Query: 61 GGLKCDRCEPGYWGLSKISSYAP-DIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGS 119
Y P D CL C C GS C +G+C C+PG G
Sbjct: 2064 ------------------FHYRPRGSDSCLPCDCYPVGSTSRSCAPHSGQCPCRPGALGR 2105
Query: 120 KCNECLDPNKKLGPNGC 136
+CN C P ++ +GC
Sbjct: 2106 QCNSCDSPFAEVTASGC 2122
Score = 31.6 bits (70), Expect = 3.2, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 17/85 (20%)
Query: 58 QGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTG--RCVCKPG 115
Q + GL+C RC PG+ G ++D C C G+ C + G CVC+P
Sbjct: 1414 QPIAGLRC-RCPPGFTG----DFCETELDLCYSNPCRNGGA----CARREGGYTCVCRPR 1464
Query: 116 VKGSKCNECLDPNKKLGPNGCMPGM 140
G C + + C+PG+
Sbjct: 1465 FTGEDCELDTEAGR------CVPGV 1483
>sp|Q16787|LAMA3_HUMAN Laminin subunit alpha-3 OS=Homo sapiens GN=LAMA3 PE=1 SV=2
Length = 3333
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 14/108 (12%)
Query: 29 AGCPSTCGCNKLGSTEDA---CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
AGC C C++ G+ E A C D+ QC+CK + G +CDRC G++ +
Sbjct: 1351 AGCEG-CNCSRRGTIEAAMPECDRDSGQCRCKPRITGRQCDRCASGFYRFPE-------- 1401
Query: 86 DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGP 133
C+ C C++ G+ C+ TG C+CK V+G++CN C + + L P
Sbjct: 1402 --CVPCNCNRDGTEPGVCDPGTGACLCKENVEGTECNVCREGSFHLDP 1447
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 29 AGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
AG C CN G + C + +C C+ GV G +CD C G++ C
Sbjct: 485 AGDIKGCDCNLEGVLPEIC-DAHGRCLCRPGVEGPRCDTCRSGFYSFPI----------C 533
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECL 125
C CS GS + C +TG+C C+PGV G +C+ CL
Sbjct: 534 QACWCSALGSYQMPCSSVTGQCECRPGVTGQRCDRCL 570
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 29 AGCPSTCGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
+GC S C C+K G+ C + C CK VGG CD CE GY+ L K + +
Sbjct: 626 SGC-SECKCHKAGTVSGTGECRQGDGDCHCKSHVGGDSCDTCEDGYFALEKSNYF----- 679
Query: 87 GCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
GC C C G++ C +G C C+ V G C
Sbjct: 680 GCQGCQCDIGGALSSMCSGPSGVCQCREHVVGKVCQR 716
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
C+ G+ C++C GY+ + APD GC+ C C + + CEQ +GRC CKP
Sbjct: 393 CQHNTAGVNCEQCAKGYYRPYGVPVDAPD--GCIPCSCDPEHA--DGCEQGSGRCHCKPN 448
Query: 116 VKGSKCNEC 124
G C +C
Sbjct: 449 FHGDNCEKC 457
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 54 CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRE--DCEQMTGRCV 111
C+CK V G C RC+ YW L K + GC +C C + G+V +C Q G C
Sbjct: 599 CQCKLHVEGPTCSRCKLLYWNLDK-----ENPSGCSECKCHKAGTVSGTGECRQGDGDCH 653
Query: 112 CKPGVKGSKCNECLD 126
CK V G C+ C D
Sbjct: 654 CKSHVGGDSCDTCED 668
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 15/99 (15%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ G+T C + QC C+ V G +C RC G++G + C C C
Sbjct: 1266 CECHPTGATGPHCSPEGGQCPCQPNVIGRQCTRCATGHYGFPR----------CKPCSCG 1315
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGP 133
R CE+MTG+C C P +C C + P
Sbjct: 1316 -----RRLCEEMTGQCRCPPRTVRPQCEVCETHSFSFHP 1349
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 45 DACIEDTEQCKCKQGVGGLKCDRCEPGYWGL-----------SKISSYAPDIDGCLKCGC 93
D C + + +C CK G C++C GY+ S SS P C C
Sbjct: 434 DGCEQGSGRCHCKPNFHGDNCEKCAIGYYNFPFCLRIPIFPVSTPSSEDPVAGDIKGCDC 493
Query: 94 SQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
+ G + E C+ GRC+C+PGV+G +C+ C
Sbjct: 494 NLEGVLPEICDAH-GRCLCRPGVEGPRCDTC 523
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 12/90 (13%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ LGS + C T QC+C+ GV G +CDRC G + P G C
Sbjct: 536 CWCSALGSYQMPCSSVTGQCECRPGVTGQRCDRCLSGAYDF-------PHCQGS-SSACD 587
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
G++ + G C CK V+G C+ C
Sbjct: 588 PAGTINSNL----GYCQCKLHVEGPTCSRC 613
Score = 37.4 bits (85), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 47 CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRE---DC 103
C E T QC+C +C+ CE + S+ P + GC C CS+ G++ +C
Sbjct: 1319 CEEMTGQCRCPPRTVRPQCEVCETHSF------SFHP-MAGCEGCNCSRRGTIEAAMPEC 1371
Query: 104 EQMTGRCVCKPGVKGSKCNEC 124
++ +G+C CKP + G +C+ C
Sbjct: 1372 DRDSGQCRCKPRITGRQCDRC 1392
Score = 34.7 bits (78), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 10/76 (13%)
Query: 53 QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG--CLKCGCSQFGSVREDCEQMTGRC 110
+C CK G G +C+RC PGY+G P G C C C+ G + C +TG C
Sbjct: 1754 RCSCKAGYTGTQCERCAPGYFG-------NPQKFGGSCQPCSCNSNGQL-GSCHPLTGDC 1805
Query: 111 VCKPGVKGSKCNECLD 126
+ + S EC D
Sbjct: 1806 INQEPKDSSPAEECDD 1821
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 9/73 (12%)
Query: 54 CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTG--RCV 111
C+ G C+RC+ GY+G + S C C C S C G RC
Sbjct: 1704 VNCQHNTAGEHCERCQEGYYGNAVHGS-------CRACPCPHTNSFATGCVVNGGDVRCS 1756
Query: 112 CKPGVKGSKCNEC 124
CK G G++C C
Sbjct: 1757 CKAGYTGTQCERC 1769
>sp|Q9H1U4|MEGF9_HUMAN Multiple epidermal growth factor-like domains protein 9 OS=Homo
sapiens GN=MEGF9 PE=2 SV=3
Length = 602
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 35 CGCNKLGSTE-DACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C C+ +GS + C + T QC+C+ G GL C+ C+ G++ L+ S C C C
Sbjct: 204 CNCSVVGSLNVNRCNQTTGQCECRPGYQGLHCETCKEGFY-LNYTSGL------CQPCDC 256
Query: 94 SQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP 138
S G++ C +G+C CK GV GS C+ C D NGC+P
Sbjct: 257 SPHGALSIPCNS-SGKCQCKVGVIGSICDRCQDGYYGFSKNGCLP 300
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 13/91 (14%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ G+ C + +C+CK GV G CDRC+ GY+G SK +GCL C C+
Sbjct: 254 CDCSPHGALSIPC-NSSGKCQCKVGVIGSICDRCQDGYYGFSK--------NGCLPCQCN 304
Query: 95 QFGSVREDCEQMTGRCV-CKPGVKGSKCNEC 124
+ C+ +TG C+ C+ KG+ C EC
Sbjct: 305 NRSA---SCDALTGACLNCQENSKGNHCEEC 332
>sp|P25391|LAMA1_HUMAN Laminin subunit alpha-1 OS=Homo sapiens GN=LAMA1 PE=1 SV=2
Length = 3075
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 43 TEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED 102
T++ C +T +C C G+KC+ CE G+WG Y ++ GC C CS GS
Sbjct: 1003 TQNTCDPETGECVCPPHTQGVKCEECEDGHWG------YDAEV-GCQACNCSLVGSTHHR 1055
Query: 103 CEQMTGRCVCKPGVKGSKCNEC 124
C+ +TG C CK G C++C
Sbjct: 1056 CDVVTGHCQCKSKFGGRACDQC 1077
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ GS C +T C CK V G +CD+C GY+GL GC C CS
Sbjct: 902 CECHVKGSHSAVCHLETGLCDCKPNVTGQQCDQCLHGYYGLDS-------GHGCRPCNCS 954
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
GSV + C G+C C PGV G +C+ C
Sbjct: 955 VAGSVSDGCTD-EGQCHCVPGVAGKRCDRC 983
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 53/116 (45%), Gaps = 26/116 (22%)
Query: 35 CGCNKLGSTEDACIEDTE-----------QCKCKQGVGGLKCDRCEPGYWGLSKISSYAP 83
C C+ +GS CI+D QC CK+G G KCDRC+ GY
Sbjct: 397 CNCDPVGSLSSVCIKDDLHSDLHNGKQPGQCPCKEGYTGEKCDRCQLGY----------K 446
Query: 84 DIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC---LDPNKKLGPNGC 136
D C+ CGC+ GS + E TG CVCK V+G C+ C K+ P GC
Sbjct: 447 DYPTCVSCGCNPVGSASD--EPCTGPCVCKENVEGKACDRCKPGFYNLKEKNPRGC 500
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG--CLKCGCSQFGSVREDCEQMTGRCVCK 113
C G G C+RC Y+G P G C KC C+ GSV DC++ +G+CVC+
Sbjct: 1479 CLLGYEGKHCERCSSSYYG-------NPQTPGGSCQKCDCNPHGSVHGDCDRTSGQCVCR 1531
Query: 114 PGVKGSKCNECLDPNKKLGPNGCM 137
G G +C+EC +P L C+
Sbjct: 1532 LGASGLRCDEC-EPRHILMETDCV 1554
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 49/116 (42%), Gaps = 22/116 (18%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ +GST C T C+CK GG CD+C GY D C+ C C
Sbjct: 1044 CNCSLVGSTHHRCDVVTGHCQCKSKFGGRACDQCSLGY----------RDFPDCVPCDCD 1093
Query: 95 QFGSVREDCE---------QMTGRCVCKPGVKGSKCNECLDPNKKL---GPNGCMP 138
G+ + C + TG C CK V G +CNEC + L P GC P
Sbjct: 1094 LRGTSGDACNLEQGLCGCVEETGACPCKENVFGPQCNECREGTFALRADNPLGCSP 1149
Score = 37.7 bits (86), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 34 TCGCNKLGSTEDA-CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSK 77
+CGCN +GS D C T C CK+ V G CDRC+PG++ L +
Sbjct: 453 SCGCNPVGSASDEPC---TGPCVCKENVEGKACDRCKPGFYNLKE 494
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 40/109 (36%), Gaps = 37/109 (33%)
Query: 50 DTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCE----- 104
D E C+C QG G C+ C GY+ +DG L FG + + CE
Sbjct: 705 DVEHCECPQGYTGTSCESCLSGYY----------RVDGIL------FGGICQPCECHGHA 748
Query: 105 ---QMTGRCV-CKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEP 149
+ G C+ C G C +CL PG +P G P
Sbjct: 749 AECNVHGVCIACAHNTTGVHCEQCL------------PGFYGEPSRGTP 785
Score = 30.0 bits (66), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 14/69 (20%)
Query: 35 CGCNKLGSTEDAC---------IEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
C C+ G++ DAC +E+T C CK+ V G +C+ C G + L A +
Sbjct: 1090 CDCDLRGTSGDACNLEQGLCGCVEETGACPCKENVFGPQCNECREGTFALR-----ADNP 1144
Query: 86 DGCLKCGCS 94
GC C CS
Sbjct: 1145 LGCSPCFCS 1153
>sp|A4D0S4|LAMB4_HUMAN Laminin subunit beta-4 OS=Homo sapiens GN=LAMB4 PE=2 SV=1
Length = 1761
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTED-ACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C P++ L+ D GC C CN LGS C DT QC C V G C+ C GYW
Sbjct: 437 CKPNHYGLS-ATDPLGC-QPCDCNPLGSLPFLTCDVDTGQCLCLSYVTGAHCEECTVGYW 494
Query: 74 GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
GL + GC C C G+ C G+C C+P V G C+E
Sbjct: 495 GLGN------HLHGCSPCDCDIGGAYSNVCSPKNGQCECRPHVTGRSCSE 538
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 51 TEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRC 110
T C C V GL CDRC GYW L P GC C C S C+Q+TG+C
Sbjct: 1047 TGACPCLPNVTGLACDRCADGYWNL------VPG-RGCQSCDCDPRTSQSSHCDQLTGQC 1099
Query: 111 VCKPGVKGSKCNECLDPNKKLGPNGCMP 138
CK G G +C+EC + P C+P
Sbjct: 1100 PCKLGYGGKRCSECQENYYGDPPGRCIP 1127
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 53 QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSV-REDCEQMTGRCV 111
QC CK+ V G KCD+C+P ++GLS A D GC C C+ GS+ C+ TG+C+
Sbjct: 422 QCLCKENVEGAKCDQCKPNHYGLS-----ATDPLGCQPCDCNPLGSLPFLTCDVDTGQCL 476
Query: 112 CKPGVKGSKCNEC 124
C V G+ C EC
Sbjct: 477 CLSYVTGAHCEEC 489
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG-C 88
GC S C C+ S C + T QC CK G GG +C C+ Y+G D G C
Sbjct: 1076 GCQS-CDCDPRTSQSSHCDQLTGQCPCKLGYGGKRCSECQENYYG---------DPPGRC 1125
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
+ C C++ G+ + C+ TG C C+ GV G +C+ C
Sbjct: 1126 IPCDCNRAGTQKPICDPDTGMCRCREGVSGQRCDRC 1161
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 38/87 (43%), Gaps = 14/87 (16%)
Query: 41 GSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVR 100
GS + C + T QC C V G +CDRC GY+G C C C++F
Sbjct: 823 GSKDTVCDQVTGQCPCHGEVSGRRCDRCLAGYFGFP----------SCHPCPCNRFA--- 869
Query: 101 EDCEQMTGRCV-CKPGVKGSKCNECLD 126
E C+ TG C C G C C+D
Sbjct: 870 ELCDPETGSCFNCGGFTTGRNCERCID 896
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGY 72
C CN+ G+ + C DT C+C++GV G +CDRC G+
Sbjct: 1128 CDCNRAGTQKPICDPDTGMCRCREGVSGQRCDRCARGH 1165
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 62/146 (42%), Gaps = 17/146 (11%)
Query: 34 TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C C+ GS +C QC+CK V G CDRC G + L + C C
Sbjct: 768 ACKCHPQGSVGSSCSRLGGQCQCKPLVVGRCCDRCSTGSYDLGHHGCHP--------CHC 819
Query: 94 SQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVIN 153
GS C+Q+TG+C C V G +C+ CL G C P PCN + +
Sbjct: 820 HPQGSKDTVCDQVTGQCPCHGEVSGRRCDRCL--AGYFGFPSCHPC----PCNRFAELCD 873
Query: 154 LQTGVELDCG---SGANREDCPSDAY 176
+TG +CG +G N E C Y
Sbjct: 874 PETGSCFNCGGFTTGRNCERCIDGYY 899
Score = 35.4 bits (80), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 20/98 (20%)
Query: 56 CKQGVGGLKCDRCEPGYWG--LSKISSYAPDIDGCLKCGCSQFGSVR---------EDCE 104
C+ G CDRC P ++ L IS D C+ C C G++
Sbjct: 362 CQHNTEGQHCDRCRPLFYRDPLKTIS----DPYACIPCECDPDGTISGGICVSHSDPALG 417
Query: 105 QMTGRCVCKPGVKGSKCNECLDPNK----KLGPNGCMP 138
+ G+C+CK V+G+KC++C PN P GC P
Sbjct: 418 SVAGQCLCKENVEGAKCDQC-KPNHYGLSATDPLGCQP 454
Score = 35.0 bits (79), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 20/85 (23%)
Query: 54 CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVR--EDCEQMTGRC- 110
C C QG G +C C G++G +IS AP C C C+ V E C ++TG C
Sbjct: 938 CNCLQGYTGTQCGECSTGFYGNPRISG-AP----CQPCACNNNIDVTDPESCSRVTGECL 992
Query: 111 ------------VCKPGVKGSKCNE 123
+CKPG GS N+
Sbjct: 993 RCLHNTQGANCQLCKPGHYGSALNQ 1017
Score = 34.3 bits (77), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 78 ISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
IS A DG + C C GSV C ++ G+C CKP V G C+ C
Sbjct: 756 ISMSAKLHDGAVACKCHPQGSVGSSCSRLGGQCQCKPLVVGRCCDRC 802
>sp|Q61092|LAMC2_MOUSE Laminin subunit gamma-2 OS=Mus musculus GN=Lamc2 PE=1 SV=2
Length = 1191
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ GS C +++ QC+CK GV G +CDRC+PG+ L+ KC C
Sbjct: 84 CNCHSKGSLSAGC-DNSGQCRCKPGVTGQRCDRCQPGFHMLTDAGCTRDQGQLDSKCDCD 142
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
G + C+ +GRCVCKP V G +C+ C
Sbjct: 143 PAG-ISGPCD--SGRCVCKPAVTGERCDRC 169
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 50/135 (37%), Gaps = 21/135 (15%)
Query: 12 WYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCK----------CKQGVG 61
W CC L C CN C+ D E + C
Sbjct: 5 WLSCCLGVALLLPAAQATSRREVCDCN---GKSRQCVFDQELHRQTGSGFRCLNCNDNTA 61
Query: 62 GLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
G+ C+RC G++ D D CL C C GS+ C+ +G+C CKPGV G +C
Sbjct: 62 GVHCERCREGFY-------RHRDRDRCLPCNCHSKGSLSAGCDN-SGQCRCKPGVTGQRC 113
Query: 122 NECLDPNKKLGPNGC 136
+ C L GC
Sbjct: 114 DRCQPGFHMLTDAGC 128
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 55 KCKQGVGGLKCDRCEPGYWGLSKISSYAPD-IDGCLKCGCSQFGSVREDCEQMTGRCVCK 113
KC G+ CD+C+ GY+G AP+ D C C CS GS +C + G CVCK
Sbjct: 540 KCIYNTAGVYCDQCKAGYFG----DPLAPNPADKCRACNCSPMGSEPGEC-RGDGSCVCK 594
Query: 114 PGVKGSKCNEC 124
PG G C+
Sbjct: 595 PGFGGLNCDHA 605
>sp|P34710|UNC6_CAEEL Netrin unc-6 OS=Caenorhabditis elegans GN=unc-6 PE=1 SV=1
Length = 612
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
C+ G C C+PG+ + S C CGC GS+ + C Q +G+CVCKPG
Sbjct: 377 CRHNTAGRNCHLCKPGF--VRDTSLPMTHRKACKSCGCHPVGSLGKSCNQSSGQCVCKPG 434
Query: 116 VKGSKCNEC 124
V G+ CN C
Sbjct: 435 VTGTTCNRC 443
Score = 38.1 bits (87), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 34 TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGY 72
+CGC+ +GS +C + + QC CK GV G C+RC GY
Sbjct: 409 SCGCHPVGSLGKSCNQSSGQCVCKPGVTGTTCNRCAKGY 447
>sp|Q61789|LAMA3_MOUSE Laminin subunit alpha-3 OS=Mus musculus GN=Lama3 PE=1 SV=3
Length = 3333
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 13/109 (11%)
Query: 29 AGCPSTCGCNKLGSTEDACIE---DTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
AGC C C++ G+ E A E D+ QC+CK V G +CD+C PG P
Sbjct: 1349 AGC-DVCNCSRKGTIEAAVSECDRDSGQCRCKPRVTGQQCDKCAPGLL---------PVP 1398
Query: 86 DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN 134
C+ C C++ G+ C+ TG C+CK V+G +C C + + L P
Sbjct: 1399 LKCVPCSCNRDGTEPSVCDPETGACMCKENVEGPQCQLCREGSFYLDPT 1447
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 60/132 (45%), Gaps = 18/132 (13%)
Query: 1 SGIYLKSCLDSWYGC-----CPDNKTLAQGPDN--AGCPSTCGCNKLGSTEDACIEDTEQ 53
SG Y ++C D +Y P P++ AG C CN G + C +D +
Sbjct: 447 SGDYCETCADGYYNFPFCLRIPVFPNYTPSPEDPVAGNIKGCDCNLEGVLPEIC-DDRGR 505
Query: 54 CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCK 113
C C+ GV G +CD C G SY+ I C C CS GS C+ G+C C
Sbjct: 506 CLCRPGVEGPQCDSCRSG--------SYSFPI--CQACQCSTIGSYPVPCDPGNGQCDCL 555
Query: 114 PGVKGSKCNECL 125
PG+ G +C+ CL
Sbjct: 556 PGITGRQCDRCL 567
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 54 CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRE--DCEQMTGRCV 111
C+CKQ V C C+P YW L+K + GC +C C + G++ +C Q G C
Sbjct: 596 CQCKQHVASPTCSVCKPLYWNLAK-----ENPRGCSECQCHEAGTLSGIGECGQEDGDCS 650
Query: 112 CKPGVKGSKCNECLD 126
CK V G C+ C D
Sbjct: 651 CKAHVTGDACDTCED 665
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 12/91 (13%)
Query: 45 DACIEDTEQCKCKQGVGGLKCDRCEPGYWG------LSKISSYAPD----IDGCLK-CGC 93
D C + + C CK G C+ C GY+ + +Y P + G +K C C
Sbjct: 431 DDCDQGSGHCHCKPNFSGDYCETCADGYYNFPFCLRIPVFPNYTPSPEDPVAGNIKGCDC 490
Query: 94 SQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
+ G + E C+ GRC+C+PGV+G +C+ C
Sbjct: 491 NLEGVLPEICDD-RGRCLCRPGVEGPQCDSC 520
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
C+ G+ C++C GY+ + A + GC+ C C +DC+Q +G C CKP
Sbjct: 390 CQHNTAGVNCEKCAKGYFRPHGVPVDA--LHGCIPCSCDP--ERADDCDQGSGHCHCKPN 445
Query: 116 VKGSKCNECLD 126
G C C D
Sbjct: 446 FSGDYCETCAD 456
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 33 STCGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLK 90
S C C++ G+ C ++ C CK V G CD CE G++ L K + + GC
Sbjct: 626 SECQCHEAGTLSGIGECGQEDGDCSCKAHVTGDACDTCEDGFFSLEKSNYF-----GCQG 680
Query: 91 CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
C C G++ C +G C C+ V+G +C
Sbjct: 681 CQCDIGGALTTMCSGPSGVCQCREHVEGKQCQR 713
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 53 QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG--CLKCGCSQFGSVREDCEQMTGRC 110
+C CK G G +C+RC PGY+G P G C C C+ G + C+ +TG C
Sbjct: 1754 RCACKPGYTGTQCERCAPGYFG-------NPQKFGGSCQPCNCNSNGQL-GPCDPLTGDC 1805
Query: 111 VCKPGVKGSKCNECLD 126
V + GS EC D
Sbjct: 1806 VNQEPKDGSPAEECDD 1821
>sp|Q9R0M0|CELR2_MOUSE Cadherin EGF LAG seven-pass G-type receptor 2 OS=Mus musculus
GN=Celsr2 PE=1 SV=2
Length = 2920
Score = 51.6 bits (122), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 54/136 (39%), Gaps = 22/136 (16%)
Query: 4 YLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCG---CNKLGSTEDACIEDTEQCKCKQGV 60
Y+ CL ++ G + + P TCG C+ + C + + +C CK+
Sbjct: 1854 YICECLPNYLGPYCETRIDQPCPRGWWGHPTCGPCNCDVSKGFDPDCNKTSGECHCKEK- 1912
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSK 120
P CL C C GS+ C+ G+C CKPGV G +
Sbjct: 1913 ------------------HYRPPGSPTCLLCDCYPTGSLSRVCDPEDGQCPCKPGVIGRQ 1954
Query: 121 CNECLDPNKKLGPNGC 136
C+ C +P ++ NGC
Sbjct: 1955 CDRCDNPFAEVTTNGC 1970
>sp|Q9HCU4|CELR2_HUMAN Cadherin EGF LAG seven-pass G-type receptor 2 OS=Homo sapiens
GN=CELSR2 PE=1 SV=1
Length = 2923
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 19/102 (18%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ + C + + +C CK+ + P P CL C C
Sbjct: 1887 CNCDVSKGFDPDCNKTSGECHCKE-------NHYRP------------PGSPTCLLCDCY 1927
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGC 136
GS+ C+ G+C CKPGV G +C+ C +P ++ NGC
Sbjct: 1928 PTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPFAEVTTNGC 1969
>sp|Q13753|LAMC2_HUMAN Laminin subunit gamma-2 OS=Homo sapiens GN=LAMC2 PE=1 SV=2
Length = 1193
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 55/135 (40%), Gaps = 21/135 (15%)
Query: 12 WYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCK----------CKQGVG 61
W GCC L C CN CI D E + C
Sbjct: 5 WLGCCLCFSLLLPAARATSRREVCDCN---GKSRQCIFDRELHRQTGNGFRCLNCNDNTD 61
Query: 62 GLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
G+ C++C+ G++ + D CL C C+ GS+ C+ +GRC CKPGV G++C
Sbjct: 62 GIHCEKCKNGFY-------RHRERDRCLPCNCNSKGSLSARCDN-SGRCSCKPGVTGARC 113
Query: 122 NECLDPNKKLGPNGC 136
+ CL L GC
Sbjct: 114 DRCLPGFHMLTDAGC 128
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C CN GS C +++ +C CK GV G +CDRC PG+ L+ KC C
Sbjct: 84 CNCNSKGSLSARC-DNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCD 142
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
G + C+ GRCVCKP V G +C+ C
Sbjct: 143 PAG-IAGPCD--AGRCVCKPAVTGERCDRC 169
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 55 KCKQGVGGLKCDRCEPGYWGLSKISSYAPD-IDGCLKCGCSQFGSVREDCEQMTGRCVCK 113
KC G+ CD+C+ GY+G AP+ D C C C+ GS C + G CVCK
Sbjct: 540 KCIHNTAGIYCDQCKAGYFG----DPLAPNPADKCRACNCNPMGSEPVGC-RSDGTCVCK 594
Query: 114 PGVKGSKCNE 123
PG G C
Sbjct: 595 PGFGGPNCEH 604
Score = 31.2 bits (69), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
Query: 50 DTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
D +C CK V G +CDRC GY+ L + +GC +C C
Sbjct: 151 DAGRCVCKPAVTGERCDRCRSGYYNLD-----GGNPEGCTQCFC 189
>sp|Q8HZI9|LAMC2_HORSE Laminin subunit gamma-2 OS=Equus caballus GN=LAMC2 PE=2 SV=1
Length = 1190
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
C G+ C+RC+ G++ + D CL C C+ GS+ C+ +GRC CKPG
Sbjct: 56 CNDNTDGIHCERCKAGFY-------RQRERDRCLPCNCNSKGSLSARCDN-SGRCSCKPG 107
Query: 116 VKGSKCNECLDPNKKLGPNGC 136
V G +C+ CL L GC
Sbjct: 108 VTGDRCDRCLPGFHTLTDAGC 128
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C CN GS C +++ +C CK GV G +CDRC PG+ L+ KC C
Sbjct: 84 CNCNSKGSLSARC-DNSGRCSCKPGVTGDRCDRCLPGFHTLTDAGCAQDQRLLDSKCDCD 142
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
G + C+ +GRCVCKP V G +C+ C
Sbjct: 143 PAG-ISGPCD--SGRCVCKPAVTGERCDRC 169
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 55 KCKQGVGGLKCDRCEPGYWGLSKISSYAPD-IDGCLKCGCSQFGSVREDCEQMTGRCVCK 113
KC G+ CD+C+ GY+G AP+ D C C C+ GS +C + G CVCK
Sbjct: 541 KCIHNTAGVHCDQCKAGYYG----DPLAPNPADKCRACNCNPVGSEPVEC-RSDGSCVCK 595
Query: 114 PGVKGSKCNEC 124
PG G C
Sbjct: 596 PGFGGLSCEHA 606
Score = 33.9 bits (76), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 50 DTEQCKCKQGVGGLKCDRCEPGYWGL 75
D+ +C CK V G +CDRC PGY+ L
Sbjct: 151 DSGRCVCKPAVTGERCDRCRPGYYHL 176
Score = 31.2 bits (69), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFG--SVREDCEQMTGRCV-C 112
C QGV G +C+ C GY+G P + C C C+ S +C+++TGRC+ C
Sbjct: 485 CPQGVTGARCELCADGYFG-DPFGERGP-VRPCQPCQCNNNVDPSASGNCDRLTGRCLKC 542
Query: 113 KPGVKGSKCNEC 124
G C++C
Sbjct: 543 IHNTAGVHCDQC 554
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.139 0.488
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,922,706
Number of Sequences: 539616
Number of extensions: 3495118
Number of successful extensions: 10458
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 339
Number of HSP's that attempted gapping in prelim test: 7234
Number of HSP's gapped (non-prelim): 2209
length of query: 189
length of database: 191,569,459
effective HSP length: 111
effective length of query: 78
effective length of database: 131,672,083
effective search space: 10270422474
effective search space used: 10270422474
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)