Your job contains 1 sequence.
>psy11285
SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV
GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSK
CNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSDAYCHIT
QNFARCCRK
The BLAST search returned 15 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11285
(189 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-030131-1033 - symbol:agrn "agrin" species:7... 420 1.0e-37 1
UNIPROTKB|F1P3E3 - symbol:AGRN "Agrin" species:9031 "Gall... 408 1.8e-36 1
UNIPROTKB|F1NWQ6 - symbol:AGRN "Agrin" species:9031 "Gall... 408 1.9e-36 1
UNIPROTKB|P31696 - symbol:AGRN "Agrin" species:9031 "Gall... 408 2.0e-36 1
UNIPROTKB|F1MSI2 - symbol:AGRN "Uncharacterized protein" ... 400 1.4e-35 1
UNIPROTKB|I3LGD9 - symbol:I3LGD9 "Uncharacterized protein... 394 5.9e-35 1
UNIPROTKB|F1Q2Z6 - symbol:AGRN "Uncharacterized protein" ... 392 9.7e-35 1
UNIPROTKB|O00468 - symbol:AGRN "Agrin" species:9606 "Homo... 385 1.9e-34 2
MGI|MGI:87961 - symbol:Agrn "agrin" species:10090 "Mus mu... 389 1.9e-34 1
RGD|2067 - symbol:Agrn "agrin" species:10116 "Rattus norv... 389 1.9e-34 1
WB|WBGene00018304 - symbol:agr-1 species:6239 "Caenorhabd... 281 4.0e-23 1
WB|WBGene00002248 - symbol:lam-3 species:6239 "Caenorhabd... 247 4.1e-19 1
UNIPROTKB|F1N8P9 - symbol:LAMA1 "Uncharacterized protein"... 242 1.4e-18 1
UNIPROTKB|F1NM47 - symbol:LAMA1 "Uncharacterized protein"... 242 1.4e-18 1
UNIPROTKB|P24043 - symbol:LAMA2 "Laminin subunit alpha-2"... 229 1.4e-18 2
MGI|MGI:99915 - symbol:Lamb3 "laminin, beta 3" species:10... 233 3.8e-18 1
ZFIN|ZDB-GENE-021226-3 - symbol:lamc1 "laminin, gamma 1" ... 234 4.5e-18 1
UNIPROTKB|F1MMT2 - symbol:LAMA2 "Uncharacterized protein"... 222 7.5e-18 2
MGI|MGI:1918264 - symbol:Megf9 "multiple EGF-like-domains... 224 1.2e-17 1
FB|FBgn0261800 - symbol:LanB1 "LanB1" species:7227 "Droso... 229 1.8e-17 1
UNIPROTKB|Q9Y6N6 - symbol:LAMC3 "Laminin subunit gamma-3"... 227 2.5e-17 1
UNIPROTKB|Q13751 - symbol:LAMB3 "Laminin subunit beta-3" ... 225 2.8e-17 1
UNIPROTKB|P55268 - symbol:LAMB2 "Laminin subunit beta-2" ... 227 2.9e-17 1
UNIPROTKB|F1MMK1 - symbol:LAMB3 "Uncharacterized protein"... 223 4.5e-17 1
UNIPROTKB|F1NI05 - symbol:LAMC1 "Uncharacterized protein"... 222 4.7e-17 1
MGI|MGI:1344394 - symbol:Lamc3 "laminin gamma 3" species:... 223 6.6e-17 1
UNIPROTKB|F1S663 - symbol:LAMC1 "Uncharacterized protein"... 222 8.6e-17 1
MGI|MGI:99914 - symbol:Lamc1 "laminin, gamma 1" species:1... 222 8.6e-17 1
UNIPROTKB|F1NK49 - symbol:LAMC1 "Uncharacterized protein"... 222 8.6e-17 1
UNIPROTKB|F1PHK9 - symbol:LAMC1 "Uncharacterized protein"... 221 1.0e-16 1
UNIPROTKB|F1P420 - symbol:LAMA2 "Uncharacterized protein"... 219 1.0e-16 2
UNIPROTKB|F1S0X0 - symbol:LAMC3 "Uncharacterized protein"... 221 1.1e-16 1
ZFIN|ZDB-GENE-060503-794 - symbol:ush2a "Usher syndrome 2... 226 1.2e-16 1
UNIPROTKB|F1PJ02 - symbol:LAMA1 "Uncharacterized protein"... 223 1.4e-16 1
UNIPROTKB|F1LPI5 - symbol:Lamb3 "Protein Lamb3" species:1... 218 1.5e-16 1
UNIPROTKB|F1SAE9 - symbol:LAMB1 "Uncharacterized protein"... 210 1.7e-16 2
UNIPROTKB|P11047 - symbol:LAMC1 "Laminin subunit gamma-1"... 219 1.8e-16 1
UNIPROTKB|F1PFM5 - symbol:LAMB3 "Uncharacterized protein"... 217 2.0e-16 1
UNIPROTKB|O75445 - symbol:USH2A "Usherin" species:9606 "H... 224 2.0e-16 1
WB|WBGene00001328 - symbol:epi-1 species:6239 "Caenorhabd... 213 2.0e-16 2
RGD|1309399 - symbol:Lamc3 "laminin gamma 3" species:1011... 218 2.3e-16 1
RGD|628777 - symbol:Ush2a "Usher syndrome 2A (autosomal r... 216 3.5e-16 1
UNIPROTKB|F1MAA7 - symbol:Lamc1 "Protein Lamc1" species:1... 216 3.8e-16 1
UNIPROTKB|F1NZ77 - symbol:USH2A "Uncharacterized protein"... 221 4.1e-16 1
UNIPROTKB|F1NJ23 - symbol:LAMB1 "Laminin subunit beta-1" ... 216 4.3e-16 1
UNIPROTKB|F1MD77 - symbol:LAMC1 "Uncharacterized protein"... 215 4.8e-16 1
MGI|MGI:1341292 - symbol:Ush2a "Usher syndrome 2A (autoso... 220 5.3e-16 1
MGI|MGI:99909 - symbol:Lama3 "laminin, alpha 3" species:1... 182 5.4e-16 2
MGI|MGI:96743 - symbol:Lamb1 "laminin B1" species:10090 "... 215 5.4e-16 1
RGD|1306311 - symbol:Lamb1 "laminin, beta 1" species:1011... 215 5.6e-16 1
UNIPROTKB|Q9H1U4 - symbol:MEGF9 "Multiple epidermal growt... 208 6.4e-16 1
FB|FBgn0261563 - symbol:wb "wing blister" species:7227 "D... 217 6.9e-16 1
MGI|MGI:99912 - symbol:Lama2 "laminin, alpha 2" species:1... 216 8.0e-16 1
UNIPROTKB|F1NCH8 - symbol:F1NCH8 "Uncharacterized protein... 212 8.8e-16 1
UNIPROTKB|P07942 - symbol:LAMB1 "Laminin subunit beta-1" ... 213 8.9e-16 1
ZFIN|ZDB-GENE-021226-1 - symbol:lamb1a "laminin, beta 1a"... 201 9.1e-16 2
RGD|1308889 - symbol:Lama2 "laminin, alpha 2" species:101... 210 1.2e-15 2
UNIPROTKB|A4D0S4 - symbol:LAMB4 "Laminin subunit beta-4" ... 211 1.4e-15 1
MGI|MGI:99916 - symbol:Lamb2 "laminin, beta 2" species:10... 211 1.5e-15 1
UNIPROTKB|F1NZZ2 - symbol:LAMA5 "Uncharacterized protein"... 213 2.0e-15 1
ZFIN|ZDB-GENE-081030-4 - symbol:lamb2 "laminin, beta 2 (l... 208 3.0e-15 1
ZFIN|ZDB-GENE-030131-9823 - symbol:lama5 "laminin, alpha ... 211 3.3e-15 1
ZFIN|ZDB-GENE-060118-1 - symbol:lama1 "laminin, alpha 1" ... 210 3.4e-15 1
RGD|2988 - symbol:Lamb2 "laminin, beta 2" species:10116 "... 207 3.9e-15 1
ZFIN|ZDB-GENE-021226-2 - symbol:lamb4 "laminin, beta 4" s... 206 5.1e-15 1
UNIPROTKB|E1C700 - symbol:LAMB2 "Uncharacterized protein"... 204 8.0e-15 1
UNIPROTKB|F1MNT4 - symbol:LAMB1 "Uncharacterized protein"... 204 8.1e-15 1
UNIPROTKB|F1PEZ5 - symbol:LAMA2 "Uncharacterized protein"... 206 9.2e-15 1
UNIPROTKB|F1PVY5 - symbol:LAMA2 "Uncharacterized protein"... 206 9.3e-15 1
WB|WBGene00002247 - symbol:lam-1 species:6239 "Caenorhabd... 203 1.0e-14 1
UNIPROTKB|F1MC13 - symbol:LAMA5 "Uncharacterized protein"... 206 1.1e-14 1
RGD|1307207 - symbol:Lama1 "laminin, alpha 1" species:101... 205 1.2e-14 1
UNIPROTKB|E1BXK1 - symbol:LAMC2 "Uncharacterized protein"... 199 1.6e-14 1
UNIPROTKB|E1BP05 - symbol:USH2A "Uncharacterized protein"... 205 2.1e-14 1
UNIPROTKB|E2R4J1 - symbol:LAMB2 "Uncharacterized protein"... 200 2.2e-14 1
WB|WBGene00016913 - symbol:lam-2 species:6239 "Caenorhabd... 199 2.5e-14 1
UNIPROTKB|F1MEG3 - symbol:LAMA1 "Uncharacterized protein"... 201 3.1e-14 1
FB|FBgn0002526 - symbol:LanA "Laminin A" species:7227 "Dr... 192 3.9e-14 2
UNIPROTKB|E1BDK6 - symbol:LAMB2 "Uncharacterized protein"... 197 4.5e-14 1
FB|FBgn0002528 - symbol:LanB2 "Laminin B2" species:7227 "... 196 5.2e-14 1
UNIPROTKB|F1SPT5 - symbol:LAMB2 "Uncharacterized protein"... 196 5.2e-14 1
UNIPROTKB|F1NQ51 - symbol:LAMA3 "Uncharacterized protein"... 199 5.6e-14 1
ZFIN|ZDB-GENE-040724-213 - symbol:lama4 "laminin, alpha 4... 188 6.0e-14 2
MGI|MGI:99892 - symbol:Lama1 "laminin, alpha 1" species:1... 198 6.5e-14 1
MGI|MGI:99913 - symbol:Lamc2 "laminin, gamma 2" species:1... 193 7.3e-14 1
UNIPROTKB|O15230 - symbol:LAMA5 "Laminin subunit alpha-5"... 196 1.3e-13 1
ZFIN|ZDB-GENE-060119-1 - symbol:lama2 "laminin, alpha 2" ... 193 2.2e-13 1
UNIPROTKB|F1LRH4 - symbol:Lamc2 "Protein Lamc2" species:1... 187 3.2e-13 1
UNIPROTKB|F1LU77 - symbol:F1LU77 "Uncharacterized protein... 190 4.7e-13 1
UNIPROTKB|F1MDD5 - symbol:Bt.12589 "Uncharacterized prote... 190 4.9e-13 1
MGI|MGI:105382 - symbol:Lama5 "laminin, alpha 5" species:... 190 5.6e-13 1
UNIPROTKB|Q16787 - symbol:LAMA3 "Laminin subunit alpha-3"... 189 6.4e-13 1
UNIPROTKB|Q13753 - symbol:LAMC2 "Laminin subunit gamma-2"... 184 6.6e-13 1
UNIPROTKB|P25391 - symbol:LAMA1 "Laminin subunit alpha-1"... 188 7.5e-13 1
UNIPROTKB|F1MAN8 - symbol:Lama5 "Protein Lama5" species:1... 181 1.4e-12 2
UNIPROTKB|F1LWS0 - symbol:Lama5 "Protein Lama5" species:1... 181 2.2e-12 1
UNIPROTKB|E2RPP1 - symbol:LAMA3 "Uncharacterized protein"... 180 5.8e-12 1
UNIPROTKB|E1B7Q3 - symbol:LAMC2 "Uncharacterized protein"... 175 6.0e-12 1
UNIPROTKB|F1NLU4 - symbol:LAMB3 "Uncharacterized protein"... 174 7.5e-12 1
UNIPROTKB|F1NQC4 - symbol:F1NQC4 "Uncharacterized protein... 160 8.2e-12 1
WARNING: Descriptions of 266 database sequences were not reported due to the
limiting value of parameter V = 100.
>ZFIN|ZDB-GENE-030131-1033 [details] [associations]
symbol:agrn "agrin" species:7955 "Danio rerio"
[GO:0005605 "basal lamina" evidence=IEA] [GO:0043113 "receptor
clustering" evidence=IEA] [GO:0007213 "G-protein coupled
acetylcholine receptor signaling pathway" evidence=IEA] [GO:0043236
"laminin binding" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IMP] [GO:0007417 "central nervous system development"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IMP] [GO:0007422 "peripheral nervous system
development" evidence=IMP] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR002350
InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050 Pfam:PF03146
Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121 SMART:SM00181
SMART:SM00280 ZFIN:ZDB-GENE-030131-1033 GO:GO:0009952 GO:GO:0007422
GO:GO:0007417 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113 GO:GO:0007213
GO:GO:0007409 PROSITE:PS01186 HOGENOM:HOG000033860
HOVERGEN:HBG080471 KO:K06254 InterPro:IPR002049 InterPro:IPR003645
InterPro:IPR001791 InterPro:IPR000082 InterPro:IPR008993
Pfam:PF00053 Pfam:PF00054 Pfam:PF01390 SMART:SM00180 SMART:SM00274
SMART:SM00282 SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024 InterPro:IPR011497
EMBL:EU716327 IPI:IPI00897584 RefSeq:NP_001170923.1
UniGene:Dr.44162 ProteinModelPortal:B3GQ72 GeneID:565373
KEGG:dre:565373 eggNOG:NOG291045 NextBio:20885851 Uniprot:B3GQ72
Length = 2028
Score = 420 (152.9 bits), Expect = 1.0e-37, P = 1.0e-37
Identities = 77/139 (55%), Positives = 86/139 (61%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
C + YGCC DNKT A G AGCPS C CN GS C T QC CK GVGGLKCDR
Sbjct: 764 CSQTVYGCCEDNKTAALGVGLAGCPSMCQCNHYGSYGGTCDPSTGQCSCKPGVGGLKCDR 823
Query: 68 CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDP 127
CEPG+W I + ++ GC C C GSVR+DCEQM+G C CKPGVKG KCN C D
Sbjct: 824 CEPGFWNFRGIVT--ENMSGCTPCNCDGLGSVRDDCEQMSGLCSCKPGVKGMKCNVCPD- 880
Query: 128 NKKLGPNGCMPGMEV-KPC 145
K+G NGC G + K C
Sbjct: 881 GSKMGVNGCDKGPKAPKSC 899
>UNIPROTKB|F1P3E3 [details] [associations]
symbol:AGRN "Agrin" species:9031 "Gallus gallus"
[GO:0005605 "basal lamina" evidence=IEA] [GO:0007213 "G-protein
coupled acetylcholine receptor signaling pathway" evidence=IEA]
[GO:0043113 "receptor clustering" evidence=IEA] [GO:0043236
"laminin binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR002350 InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050
Pfam:PF03146 Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121
SMART:SM00181 SMART:SM00280 InterPro:IPR000152 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113
GO:GO:0007213 PROSITE:PS01186 IPI:IPI00603573 InterPro:IPR002049
InterPro:IPR003645 InterPro:IPR001791 InterPro:IPR000082
InterPro:IPR008993 Pfam:PF00053 Pfam:PF00054 Pfam:PF01390
SMART:SM00180 SMART:SM00274 SMART:SM00282 SMART:SM00200
SUPFAM:SSF50242 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 InterPro:IPR011497
GeneTree:ENSGT00530000063501 EMBL:AADN02040845 EMBL:AADN02040846
EMBL:AADN02040847 EMBL:AADN02040848 EMBL:AADN02040849
EMBL:AADN02040850 EMBL:AADN02077829 Ensembl:ENSGALT00000003171
Uniprot:F1P3E3
Length = 1952
Score = 408 (148.7 bits), Expect = 1.8e-36, P = 1.8e-36
Identities = 87/182 (47%), Positives = 99/182 (54%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
C + YGCCPDN TLA G AGCPSTC CN GS C T QC CK GVGGLKCDR
Sbjct: 649 CSQTIYGCCPDNMTLALGVGAAGCPSTCQCNPYGSYGGTCDPATGQCSCKPGVGGLKCDR 708
Query: 68 CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDP 127
CEPG+W I + + GC C C GSVR+DCEQMTG C CK G+ G KCN+C P
Sbjct: 709 CEPGFWNFRGIVTDSKS--GCTPCNCDPVGSVRDDCEQMTGLCSCKTGITGMKCNQC--P 764
Query: 128 N-KKLGPNGCMPGMEV-KPCNGEPPVINLQTGVELDCGSGANREDCPSDAYCHITQNFAR 185
N K+G GC K C E T VE++ G +CPS C N +
Sbjct: 765 NGSKMGMAGCEKDPSAPKSCE-EMSCEFGATCVEVN---GFAHCECPSPL-CS-EANMTK 818
Query: 186 CC 187
C
Sbjct: 819 VC 820
>UNIPROTKB|F1NWQ6 [details] [associations]
symbol:AGRN "Agrin" species:9031 "Gallus gallus"
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=IEA] [GO:0043236 "laminin binding" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0043113 "receptor
clustering" evidence=IEA] InterPro:IPR000742 InterPro:IPR002350
InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050 Pfam:PF03146
Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121 SMART:SM00181
SMART:SM00280 InterPro:IPR000152 GO:GO:0005615 GO:GO:0009986
GO:GO:0043525 GO:GO:0045944 GO:GO:0007009 GO:GO:0045202
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605
GO:GO:0043113 GO:GO:0007213 PROSITE:PS01186 GO:GO:0030548
GO:GO:2000541 GO:GO:0032314 InterPro:IPR002049 InterPro:IPR003645
InterPro:IPR001791 InterPro:IPR000082 InterPro:IPR008993
Pfam:PF00053 Pfam:PF00054 Pfam:PF01390 SMART:SM00180 SMART:SM00274
SMART:SM00282 SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS00010
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
OMA:TNRWLRV GO:GO:0001934 InterPro:IPR011497
GeneTree:ENSGT00530000063501 EMBL:AADN02040845 EMBL:AADN02040846
EMBL:AADN02040847 EMBL:AADN02040848 EMBL:AADN02040849
EMBL:AADN02040850 EMBL:AADN02077829 IPI:IPI01017232
Ensembl:ENSGALT00000040179 Uniprot:F1NWQ6
Length = 1998
Score = 408 (148.7 bits), Expect = 1.9e-36, P = 1.9e-36
Identities = 87/182 (47%), Positives = 99/182 (54%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
C + YGCCPDN TLA G AGCPSTC CN GS C T QC CK GVGGLKCDR
Sbjct: 699 CSQTIYGCCPDNMTLALGVGAAGCPSTCQCNPYGSYGGTCDPATGQCSCKPGVGGLKCDR 758
Query: 68 CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDP 127
CEPG+W I + + GC C C GSVR+DCEQMTG C CK G+ G KCN+C P
Sbjct: 759 CEPGFWNFRGIVTDSKS--GCTPCNCDPVGSVRDDCEQMTGLCSCKTGITGMKCNQC--P 814
Query: 128 N-KKLGPNGCMPGMEV-KPCNGEPPVINLQTGVELDCGSGANREDCPSDAYCHITQNFAR 185
N K+G GC K C E T VE++ G +CPS C N +
Sbjct: 815 NGSKMGMAGCEKDPSAPKSCE-EMSCEFGATCVEVN---GFAHCECPSPL-CS-EANMTK 868
Query: 186 CC 187
C
Sbjct: 869 VC 870
>UNIPROTKB|P31696 [details] [associations]
symbol:AGRN "Agrin" species:9031 "Gallus gallus"
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007171 "activation of transmembrane receptor protein tyrosine
kinase activity" evidence=IDA] [GO:0035374 "chondroitin sulfate
binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0045202 "synapse" evidence=ISS] [GO:0045887 "positive
regulation of synaptic growth at neuromuscular junction"
evidence=ISS] [GO:0043236 "laminin binding" evidence=IDA]
[GO:0032321 "positive regulation of Rho GTPase activity"
evidence=ISS] [GO:0051491 "positive regulation of filopodium
assembly" evidence=ISS] [GO:0033691 "sialic acid binding"
evidence=IDA] [GO:0043395 "heparan sulfate proteoglycan binding"
evidence=IDA] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0002162
"dystroglycan binding" evidence=IDA] [GO:0043113 "receptor
clustering" evidence=ISS;IDA] [GO:0030548 "acetylcholine receptor
regulator activity" evidence=IDA] [GO:0030297 "transmembrane
receptor protein tyrosine kinase activator activity" evidence=IDA]
[GO:0005605 "basal lamina" evidence=ISS] InterPro:IPR000742
InterPro:IPR002350 InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050
Pfam:PF03146 PROSITE:PS50026 PROSITE:PS51121 PROSITE:PS51465
SMART:SM00181 SMART:SM00280 InterPro:IPR000152 GO:GO:0007275
GO:GO:0005615 GO:GO:0009986 GO:GO:0030154 GO:GO:0043525
GO:GO:0045887 GO:GO:0045944 GO:GO:0007009 GO:GO:0008201
GO:GO:0045202 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043236 GO:GO:0043113
GO:GO:0007213 PROSITE:PS01186 GO:GO:0033691 GO:GO:0002162
EMBL:U35613 EMBL:M94271 EMBL:M97371 EMBL:M97372 EMBL:U07271
IPI:IPI00579891 IPI:IPI00590466 IPI:IPI00592771 IPI:IPI00597536
IPI:IPI00603573 IPI:IPI00786263 PIR:JH0591 RefSeq:NP_990858.1
UniGene:Gga.4448 UniGene:Gga.48948 PDB:1JB3 PDB:1JC7 PDB:1PXU
PDB:1PZ7 PDB:1PZ8 PDB:1PZ9 PDB:1Q56 PDB:3I70 PDBsum:1JB3
PDBsum:1JC7 PDBsum:1PXU PDBsum:1PZ7 PDBsum:1PZ8 PDBsum:1PZ9
PDBsum:1Q56 PDBsum:3I70 ProteinModelPortal:P31696 SMR:P31696
IntAct:P31696 STRING:P31696 PRIDE:P31696 GeneID:396538
KEGG:gga:396538 CTD:375790 eggNOG:NOG312635 HOGENOM:HOG000033860
HOVERGEN:HBG080471 KO:K06254 OrthoDB:EOG4HQDHD
EvolutionaryTrace:P31696 NextBio:20816574 GO:GO:0030548
GO:GO:0035374 GO:GO:0043395 GO:GO:0030297 GO:GO:0051491
GO:GO:2000541 GO:GO:0032321 GO:GO:0032314 InterPro:IPR002049
InterPro:IPR003645 InterPro:IPR001791 InterPro:IPR000082
InterPro:IPR008993 Pfam:PF00053 Pfam:PF00054 Pfam:PF01390
SMART:SM00180 SMART:SM00274 SMART:SM00282 SMART:SM00200
SUPFAM:SSF50242 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 Uniprot:P31696
Length = 2081
Score = 408 (148.7 bits), Expect = 2.0e-36, P = 2.0e-36
Identities = 87/182 (47%), Positives = 99/182 (54%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
C + YGCCPDN TLA G AGCPSTC CN GS C T QC CK GVGGLKCDR
Sbjct: 766 CSQTIYGCCPDNMTLALGVGAAGCPSTCQCNPYGSYGGTCDPATGQCSCKPGVGGLKCDR 825
Query: 68 CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDP 127
CEPG+W I + + GC C C GSVR+DCEQMTG C CK G+ G KCN+C P
Sbjct: 826 CEPGFWNFRGIVTDSKS--GCTPCNCDPVGSVRDDCEQMTGLCSCKTGITGMKCNQC--P 881
Query: 128 N-KKLGPNGCMPGMEV-KPCNGEPPVINLQTGVELDCGSGANREDCPSDAYCHITQNFAR 185
N K+G GC K C E T VE++ G +CPS C N +
Sbjct: 882 NGSKMGMAGCEKDPSAPKSCE-EMSCEFGATCVEVN---GFAHCECPSPL-CS-EANMTK 935
Query: 186 CC 187
C
Sbjct: 936 VC 937
>UNIPROTKB|F1MSI2 [details] [associations]
symbol:AGRN "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043113 "receptor clustering" evidence=IEA] [GO:0005605
"basal lamina" evidence=IEA] [GO:0043236 "laminin binding"
evidence=IEA] [GO:0007213 "G-protein coupled acetylcholine receptor
signaling pathway" evidence=IEA] InterPro:IPR000742
InterPro:IPR002350 InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050
Pfam:PF03146 Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121
SMART:SM00181 SMART:SM00280 GO:GO:0005615 GO:GO:0009986
GO:GO:0043525 GO:GO:0007528 GO:GO:0045944 GO:GO:0007009
GO:GO:0045202 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113 GO:GO:0007213
PROSITE:PS01186 GO:GO:0030548 GO:GO:2000541 GO:GO:0032314
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
InterPro:IPR000082 InterPro:IPR008993 Pfam:PF00053 Pfam:PF00054
Pfam:PF01390 SMART:SM00180 SMART:SM00274 SMART:SM00282
SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 OMA:TNRWLRV GO:GO:0045213
GO:GO:0001934 InterPro:IPR011497 GeneTree:ENSGT00530000063501
GO:GO:0008582 EMBL:DAAA02043249 IPI:IPI00708223
Ensembl:ENSBTAT00000017563 Uniprot:F1MSI2
Length = 2032
Score = 400 (145.9 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 80/170 (47%), Positives = 96/170 (56%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
C + YGCC DN T+AQG AGCPS+C CN GS C T QC C+ GVGGLKCDR
Sbjct: 757 CAQTPYGCCQDNITVAQGVGLAGCPSSCQCNPHGSYGGTCDPVTGQCSCRPGVGGLKCDR 816
Query: 68 CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDP 127
CEPG+W I + GC C C G+VR+DCEQMTG C CKPGV G KC +C D
Sbjct: 817 CEPGFWNFRGIVTDGRS--GCTPCSCDPRGAVRDDCEQMTGLCSCKPGVAGPKCGQCPD- 873
Query: 128 NKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSDAYC 177
+ LGP GC + PP +T E+ C GA+ + A+C
Sbjct: 874 GRALGPAGC-------ETDSSPP----KTCAEMLCEFGASCVEEAGSAHC 912
>UNIPROTKB|I3LGD9 [details] [associations]
symbol:I3LGD9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043236 "laminin binding" evidence=IEA] [GO:0043113
"receptor clustering" evidence=IEA] [GO:0007213 "G-protein coupled
acetylcholine receptor signaling pathway" evidence=IEA] [GO:0005605
"basal lamina" evidence=IEA] InterPro:IPR000742 InterPro:IPR002350
InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050 Pfam:PF03146
Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121 SMART:SM00181
SMART:SM00280 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113 GO:GO:0007213
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR003645
InterPro:IPR001791 InterPro:IPR000082 InterPro:IPR008993
Pfam:PF00053 Pfam:PF00054 Pfam:PF01390 SMART:SM00180 SMART:SM00274
SMART:SM00282 SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024 OMA:TNRWLRV
InterPro:IPR011497 GeneTree:ENSGT00530000063501 EMBL:FP565685
Ensembl:ENSSSCT00000026215 Uniprot:I3LGD9
Length = 2039
Score = 394 (143.8 bits), Expect = 5.9e-35, P = 5.9e-35
Identities = 80/170 (47%), Positives = 95/170 (55%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
C + YGCC DN T A+G AGCPS+C CN GS C T QC C+ GVGGLKCDR
Sbjct: 769 CAQAPYGCCQDNITAARGVGLAGCPSSCQCNPHGSYSGTCDPATGQCSCRPGVGGLKCDR 828
Query: 68 CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDP 127
CEPG+W I + GC C C G+VR+DCEQMTG C CKPGV G KC +C D
Sbjct: 829 CEPGFWNFRGIVTDGRS--GCTPCSCDPQGAVRDDCEQMTGLCSCKPGVAGPKCGQCPDG 886
Query: 128 NKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSDAYC 177
+ LGP GC E P P +T E+ C GA+ + A+C
Sbjct: 887 HA-LGPAGC----ETDP---SAP----KTCAEMPCEFGASCVEEAGSAHC 924
>UNIPROTKB|F1Q2Z6 [details] [associations]
symbol:AGRN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043113 "receptor clustering" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0043236 "laminin
binding" evidence=IEA] [GO:0007213 "G-protein coupled acetylcholine
receptor signaling pathway" evidence=IEA] InterPro:IPR000742
InterPro:IPR002350 InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050
Pfam:PF03146 Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121
SMART:SM00181 SMART:SM00280 GO:GO:0005615 GO:GO:0009986
GO:GO:0043525 GO:GO:0007528 GO:GO:0045944 GO:GO:0007009
GO:GO:0045202 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113 GO:GO:0007213
PROSITE:PS01186 CTD:375790 KO:K06254 GO:GO:0030548 GO:GO:2000541
GO:GO:0032314 InterPro:IPR002049 InterPro:IPR003645
InterPro:IPR001791 InterPro:IPR000082 InterPro:IPR008993
Pfam:PF00053 Pfam:PF00054 Pfam:PF01390 SMART:SM00180 SMART:SM00274
SMART:SM00282 SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024 OMA:TNRWLRV
GO:GO:0045213 GO:GO:0001934 InterPro:IPR011497
GeneTree:ENSGT00530000063501 GO:GO:0008582 EMBL:AAEX03003837
EMBL:AAEX03003838 RefSeq:XP_536713.3 Ensembl:ENSCAFT00000030741
GeneID:479574 KEGG:cfa:479574 Uniprot:F1Q2Z6
Length = 2046
Score = 392 (143.0 bits), Expect = 9.7e-35, P = 9.7e-35
Identities = 70/129 (54%), Positives = 80/129 (62%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
C + YGCC DN T A+G AGCPS+C CN GS C T QC C+ GVGGLKCDR
Sbjct: 768 CTQTPYGCCQDNVTAARGVGLAGCPSSCQCNPHGSYSGTCDPTTGQCSCRPGVGGLKCDR 827
Query: 68 CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDP 127
CEPG+W I + GC C C G+VR+DCEQMTG C CKPGV G KC +C D
Sbjct: 828 CEPGFWNFRGIVTDGRS--GCTPCSCDPRGAVRDDCEQMTGLCSCKPGVAGPKCGQCPDG 885
Query: 128 NKKLGPNGC 136
+ LGP GC
Sbjct: 886 HA-LGPGGC 893
>UNIPROTKB|O00468 [details] [associations]
symbol:AGRN "Agrin" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0043236 "laminin binding" evidence=TAS]
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=TAS] [GO:0045162 "clustering of voltage-gated
sodium channels" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043113 "receptor clustering" evidence=IDA;IMP]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0005605 "basal
lamina" evidence=IDA] [GO:0050808 "synapse organization"
evidence=TAS] [GO:0005200 "structural constituent of cytoskeleton"
evidence=TAS] [GO:0031012 "extracellular matrix" evidence=IDA;TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0045202 "synapse"
evidence=ISS] [GO:0045887 "positive regulation of synaptic growth
at neuromuscular junction" evidence=ISS] [GO:0032321 "positive
regulation of Rho GTPase activity" evidence=ISS] [GO:0051491
"positive regulation of filopodium assembly" evidence=ISS]
[GO:0035374 "chondroitin sulfate binding" evidence=ISS] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISS] [GO:0005509
"calcium ion binding" evidence=ISS] [GO:0033691 "sialic acid
binding" evidence=ISS] [GO:0002162 "dystroglycan binding"
evidence=ISS] [GO:0005796 "Golgi lumen" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0005975 "carbohydrate metabolic
process" evidence=TAS] [GO:0006024 "glycosaminoglycan biosynthetic
process" evidence=TAS] [GO:0006027 "glycosaminoglycan catabolic
process" evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
[GO:0030203 "glycosaminoglycan metabolic process" evidence=TAS]
[GO:0030204 "chondroitin sulfate metabolic process" evidence=TAS]
[GO:0043202 "lysosomal lumen" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR000742 InterPro:IPR002350 InterPro:IPR004850
Pfam:PF00008 Pfam:PF00050 Pfam:PF03146 Pfam:PF07648 PROSITE:PS50026
PROSITE:PS51121 PROSITE:PS51465 SMART:SM00181 SMART:SM00280
GO:GO:0005886 Reactome:REACT_111045 Reactome:REACT_116125
GO:GO:0007411 GO:GO:0005615 GO:GO:0009986 GO:GO:0043525
GO:GO:0005200 GO:GO:0005975 GO:GO:0007528 GO:GO:0045887
GO:GO:0045944 GO:GO:0007009 GO:GO:0050808 GO:GO:0045202
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0007416 GO:GO:0005605 GO:GO:0043236
GO:GO:0043113 Orphanet:98913 GO:GO:0007213 PROSITE:PS01186
GO:GO:0033691 GO:GO:0043202 GO:GO:0002162 CTD:375790
eggNOG:NOG312635 HOGENOM:HOG000033860 HOVERGEN:HBG080471 KO:K06254
OrthoDB:EOG4HQDHD GO:GO:0030548 GO:GO:0035374 GO:GO:0043395
GO:GO:0051491 GO:GO:2000541 GO:GO:0032321 GO:GO:0032314
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
InterPro:IPR000082 InterPro:IPR008993 Pfam:PF00053 Pfam:PF00054
Pfam:PF01390 SMART:SM00180 SMART:SM00274 SMART:SM00282
SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 EMBL:U84406 EMBL:AB191264
EMBL:AL645608 EMBL:AF016903 EMBL:BC004220 EMBL:BC007649
EMBL:BC034009 EMBL:BC063620 IPI:IPI00374563 RefSeq:NP_940978.2
UniGene:Hs.273330 ProteinModelPortal:O00468 SMR:O00468
IntAct:O00468 MINT:MINT-4053526 STRING:O00468 PhosphoSite:O00468
PaxDb:O00468 PRIDE:O00468 Ensembl:ENST00000379370 GeneID:375790
KEGG:hsa:375790 UCSC:uc001ack.2 GeneCards:GC01P000946 HGNC:HGNC:329
HPA:HPA040090 MIM:103320 MIM:254300 neXtProt:NX_O00468
PharmGKB:PA24626 InParanoid:O00468 OMA:TNRWLRV GenomeRNAi:375790
NextBio:100617 ArrayExpress:O00468 Bgee:O00468 CleanEx:HS_AGRN
Genevestigator:O00468 GermOnline:ENSG00000188157 GO:GO:0005796
GO:GO:0030204 GO:GO:0045162 GO:GO:0006024 GO:GO:0006027
GO:GO:0045213 GO:GO:0001934 InterPro:IPR011497 Uniprot:O00468
Length = 2067
Score = 385 (140.6 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 69/129 (53%), Positives = 79/129 (61%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
C + YGCC DN T A+G AGCPS C CN GS C T QC C+ GVGGL+CDR
Sbjct: 766 CAQTPYGCCQDNITAARGVGLAGCPSACQCNPHGSYGGTCDPATGQCSCRPGVGGLRCDR 825
Query: 68 CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDP 127
CEPG+W I + GC C C G+VR+DCEQMTG C CKPGV G KC +C D
Sbjct: 826 CEPGFWNFRGIVTDGRS--GCTPCSCDPQGAVRDDCEQMTGLCSCKPGVAGPKCGQCPD- 882
Query: 128 NKKLGPNGC 136
+ LGP GC
Sbjct: 883 GRALGPAGC 891
Score = 36 (17.7 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 127 PNKKLGPNGCMPGMEVKPCNGEP 149
P++ G P KPC+ +P
Sbjct: 1315 PSRVPGRRPPAPQQPPKPCDSQP 1337
>MGI|MGI:87961 [details] [associations]
symbol:Agrn "agrin" species:10090 "Mus musculus" [GO:0001932
"regulation of protein phosphorylation" evidence=ISO] [GO:0001934
"positive regulation of protein phosphorylation" evidence=IDA]
[GO:0002162 "dystroglycan binding" evidence=ISO] [GO:0005509
"calcium ion binding" evidence=ISO] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=ISO;IDA]
[GO:0005615 "extracellular space" evidence=IDA;TAS] [GO:0007009
"plasma membrane organization" evidence=IMP] [GO:0007268 "synaptic
transmission" evidence=ISO;IDA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007416 "synapse
assembly" evidence=ISO] [GO:0007528 "neuromuscular junction
development" evidence=IGI] [GO:0008582 "regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0009986 "cell
surface" evidence=IDA] [GO:0010469 "regulation of receptor
activity" evidence=IDA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030548 "acetylcholine receptor regulator
activity" evidence=IDA] [GO:0031012 "extracellular matrix"
evidence=ISO] [GO:0032314 "regulation of Rac GTPase activity"
evidence=IDA] [GO:0032321 "positive regulation of Rho GTPase
activity" evidence=ISO] [GO:0043113 "receptor clustering"
evidence=IGI;ISO;IMP;IDA] [GO:0043525 "positive regulation of
neuron apoptotic process" evidence=IMP] [GO:0045202 "synapse"
evidence=ISO;IDA] [GO:0045213 "neurotransmitter receptor metabolic
process" evidence=IDA] [GO:0045887 "positive regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0051491 "positive regulation of
filopodium assembly" evidence=ISO] [GO:2000541 "positive regulation
of protein geranylgeranylation" evidence=IMP] Reactome:REACT_112621
InterPro:IPR000742 InterPro:IPR002350 Pfam:PF00008 Pfam:PF00050
Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51465 SMART:SM00181
SMART:SM00280 MGI:MGI:87961 GO:GO:0005615 GO:GO:0009986
GO:GO:0043525 GO:GO:0007528 GO:GO:0045887 GO:GO:0045944
GO:GO:0007009 GO:GO:0045202 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007416 GO:GO:0005605
GO:GO:0043113 PROSITE:PS01186 Reactome:REACT_118324 GO:GO:0033691
GO:GO:0002162 eggNOG:NOG312635 HOGENOM:HOG000033860
HOVERGEN:HBG080471 GO:GO:0030548 GO:GO:0035374 GO:GO:0043395
GO:GO:0051491 GO:GO:2000541 GO:GO:0032321 GO:GO:0032314
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054 Pfam:PF01390
SMART:SM00180 SMART:SM00274 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
OMA:TNRWLRV GO:GO:0005796 GO:GO:0045213 GO:GO:0001934
InterPro:IPR011497 EMBL:AL928667 EMBL:BC150703 IPI:IPI00378698
IPI:IPI00648938 IPI:IPI00874558 UniGene:Mm.273098 PDB:3PVE
PDBsum:3PVE ProteinModelPortal:A2ASQ1 SMR:A2ASQ1 STRING:A2ASQ1
PaxDb:A2ASQ1 PRIDE:A2ASQ1 Ensembl:ENSMUST00000071248
Ensembl:ENSMUST00000075787 Ensembl:ENSMUST00000105574
Ensembl:ENSMUST00000105575 UCSC:uc008wgf.1
GeneTree:ENSGT00530000063501 InParanoid:A2ASQ1
Reactome:REACT_115433 ChiTaRS:AGRN EvolutionaryTrace:A2ASQ1
Bgee:A2ASQ1 Genevestigator:A2ASQ1 Uniprot:A2ASQ1
Length = 1950
Score = 389 (142.0 bits), Expect = 1.9e-34, P = 1.9e-34
Identities = 81/170 (47%), Positives = 94/170 (55%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
C + YGCC DN T AQG AGCPSTC CN GS C T QC C+ GVGGL+CDR
Sbjct: 661 CAQTPYGCCQDNVTAAQGVGLAGCPSTCHCNPHGSYSGTCDPVTGQCSCRPGVGGLRCDR 720
Query: 68 CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDP 127
CEPG+W I + GC C C G+VR+DCEQMTG C C+PGV G KC +C D
Sbjct: 721 CEPGFWNFRGIVTDGHS--GCTPCSCDPRGAVRDDCEQMTGLCSCRPGVAGPKCGQCPD- 777
Query: 128 NKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSDAYC 177
+ LG GC E P PV T VE+ C GA+ + A C
Sbjct: 778 GQALGHLGC----EADPTT---PV----TCVEMHCEFGASCVEEAGFAQC 816
>RGD|2067 [details] [associations]
symbol:Agrn "agrin" species:10116 "Rattus norvegicus" [GO:0001932
"regulation of protein phosphorylation" evidence=IDA] [GO:0001934
"positive regulation of protein phosphorylation" evidence=ISO]
[GO:0002162 "dystroglycan binding" evidence=IDA] [GO:0005509 "calcium
ion binding" evidence=ISS;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005578 "proteinaceous extracellular matrix"
evidence=TAS] [GO:0005604 "basement membrane" evidence=ISO;IDA]
[GO:0005605 "basal lamina" evidence=ISO;ISS] [GO:0005615
"extracellular space" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007009 "plasma membrane organization"
evidence=ISO] [GO:0007268 "synaptic transmission" evidence=ISO;IMP]
[GO:0007416 "synapse assembly" evidence=IMP] [GO:0007528
"neuromuscular junction development" evidence=ISO;TAS] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=ISO] [GO:0009986 "cell surface" evidence=ISO] [GO:0010469
"regulation of receptor activity" evidence=ISO] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030548 "acetylcholine receptor regulator activity" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=ISO] [GO:0032314
"regulation of Rac GTPase activity" evidence=ISO] [GO:0032321
"positive regulation of Rho GTPase activity" evidence=IDA]
[GO:0033691 "sialic acid binding" evidence=ISS] [GO:0035374
"chondroitin sulfate binding" evidence=ISS] [GO:0043113 "receptor
clustering" evidence=ISO;ISS;IDA] [GO:0043395 "heparan sulfate
proteoglycan binding" evidence=ISS] [GO:0043525 "positive regulation
of neuron apoptotic process" evidence=ISO] [GO:0045202 "synapse"
evidence=ISO;IDA] [GO:0045213 "neurotransmitter receptor metabolic
process" evidence=ISO] [GO:0045887 "positive regulation of synaptic
growth at neuromuscular junction" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0051491 "positive regulation of
filopodium assembly" evidence=IDA] [GO:2000541 "positive regulation
of protein geranylgeranylation" evidence=ISO] InterPro:IPR000742
InterPro:IPR002350 Pfam:PF00008 Pfam:PF00050 Pfam:PF07648
PROSITE:PS50026 PROSITE:PS51465 SMART:SM00181 SMART:SM00280 RGD:2067
GO:GO:0005615 GO:GO:0009986 GO:GO:0043525 GO:GO:0007528 GO:GO:0045887
GO:GO:0045944 GO:GO:0007009 GO:GO:0045202 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007416
GO:GO:0005605 GO:GO:0043113 PROSITE:PS01186 GO:GO:0033691
GO:GO:0002162 CTD:375790 eggNOG:NOG312635 HOGENOM:HOG000033860
HOVERGEN:HBG080471 KO:K06254 GO:GO:0030548 GO:GO:0035374
GO:GO:0043395 GO:GO:0051491 GO:GO:2000541 GO:GO:0032321 GO:GO:0032314
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054 Pfam:PF01390
SMART:SM00180 SMART:SM00274 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
GO:GO:0045213 GO:GO:0001934 InterPro:IPR011497 EMBL:M64780
EMBL:S44194 IPI:IPI00188885 IPI:IPI00231249 IPI:IPI00231250
IPI:IPI00231251 IPI:IPI00231252 PIR:JH0399 RefSeq:NP_786930.1
UniGene:Rn.2163 PDB:3V64 PDB:3V65 PDBsum:3V64 PDBsum:3V65
ProteinModelPortal:P25304 SMR:P25304 IntAct:P25304 STRING:P25304
PRIDE:P25304 GeneID:25592 KEGG:rno:25592 InParanoid:P25304
NextBio:607271 ArrayExpress:P25304 Genevestigator:P25304
GermOnline:ENSRNOG00000020205 GO:GO:0001932 Uniprot:P25304
Length = 1959
Score = 389 (142.0 bits), Expect = 1.9e-34, P = 1.9e-34
Identities = 81/170 (47%), Positives = 94/170 (55%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
C + YGCC DN T AQG AGCPSTC CN GS C T QC C+ GVGGL+CDR
Sbjct: 661 CAQTPYGCCQDNFTAAQGVGLAGCPSTCHCNPHGSYSGTCDPATGQCSCRPGVGGLRCDR 720
Query: 68 CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDP 127
CEPG+W I + GC C C G+VR+DCEQMTG C C+PGV G KC +C D
Sbjct: 721 CEPGFWNFRGIVTDGHS--GCTPCSCDPRGAVRDDCEQMTGLCSCRPGVAGPKCGQCPD- 777
Query: 128 NKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSDAYC 177
+ LG GC E P PV T VE+ C GA+ + A C
Sbjct: 778 GQVLGHLGC----EADPMT---PV----TCVEIHCEFGASCVEKAGFAQC 816
>WB|WBGene00018304 [details] [associations]
symbol:agr-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0005605 "basal lamina" evidence=IDA] InterPro:IPR000742
InterPro:IPR002350 Pfam:PF00050 Pfam:PF07648 SMART:SM00181
SMART:SM00280 GO:GO:0009792 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605 KO:K06254
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00274 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 InterPro:IPR011497
GeneTree:ENSGT00530000063501 Pfam:PF02210 EMBL:AM773423
EMBL:FO081361 RefSeq:NP_001022152.3 UniGene:Cel.24197
ProteinModelPortal:G5EG68 SMR:G5EG68 EnsemblMetazoa:F41G3.12
GeneID:3565243 KEGG:cel:CELE_F41G3.12 CTD:3565243 WormBase:F41G3.12
OMA:SARICGE NextBio:955733 Uniprot:G5EG68
Length = 1473
Score = 281 (104.0 bits), Expect = 4.0e-23, P = 4.0e-23
Identities = 53/115 (46%), Positives = 68/115 (59%)
Query: 32 PSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKC 91
P +C CN++GS C ++T QCKC+ GV G+KCD C P +WG+ I+ A C C
Sbjct: 668 PDSCQCNRVGSFGHTC-DETGQCKCRPGVAGIKCDHCLPSFWGIHLIAQGALS---CRPC 723
Query: 92 GCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPN-KKLGPNGCM-PGMEVKP 144
GCS FGS R DCEQ TG+C CK G G KC+ C PN + GC+ P + P
Sbjct: 724 GCSAFGSSRSDCEQTTGKCECKNGALGDKCDLC--PNGSMMTAGGCVSPAVYKTP 776
>WB|WBGene00002248 [details] [associations]
symbol:lam-3 species:6239 "Caenorhabditis elegans"
[GO:0005604 "basement membrane" evidence=IEA;IDA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0030155 GO:GO:0010171
GO:GO:0040011 GO:GO:0040018 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604
HSSP:P02468 Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 KO:K05637 GO:GO:0005606 EMBL:Z81125
EMBL:AF074902 EMBL:AL008585 PIR:F87908 PIR:T23064 PIR:T43291
RefSeq:NP_492775.2 UniGene:Cel.19655 ProteinModelPortal:G5ECE3
SMR:G5ECE3 EnsemblMetazoa:T22A3.8 GeneID:172952
KEGG:cel:CELE_T22A3.8 CTD:172952 WormBase:T22A3.8 OMA:TAINEAH
NextBio:877661 Uniprot:G5ECE3
Length = 3102
Score = 247 (92.0 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 61/165 (36%), Positives = 83/165 (50%)
Query: 28 NAGCPSTCGCNKLGSTEDA-CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
+AGC C CN GS ED C + T +C+C++ V G C++C GY+ ++ S D
Sbjct: 1030 DAGC-QFCHCNIYGSIEDGKCDQTTGKCECRENVEGTMCEKCADGYFNIT--SG-----D 1081
Query: 87 GCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPN-KKLGPNGCMPGMEVKPC 145
GC CGC GS C +TG+CVCKPGV G KC+ CL PN L GC E +PC
Sbjct: 1082 GCEDCGCDPTGSEDVSCNLVTGQCVCKPGVTGLKCDSCL-PNFYGLTSEGCT---ECEPC 1137
Query: 146 NGEPPVINLQTGVELDCGS---GANREDCPSDAYCHITQNFARCC 187
V + G C G E+C ++A+ + N + C
Sbjct: 1138 PAPGQVCDPIDG-SCVCPPNTVGEMCENCTTNAWDYHPLNGCKLC 1181
Score = 199 (75.1 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 48/153 (31%), Positives = 74/153 (48%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
CGC+ G+ C E+ +C+CK+ G +CDRC+ + + +GC C C+
Sbjct: 941 CGCHTQGAVNPQCSEENGECECKENYIGAQCDRCKENHGDVE---------NGCPACDCN 991
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCN--G--EPP 150
GS+ DC+Q++G+C CK GV G +C++C GC + CN G E
Sbjct: 992 DTGSIGSDCDQVSGQCNCKQGVFGKQCDQCRPSYFNFTDAGC----QFCHCNIYGSIEDG 1047
Query: 151 VINLQTGVELDCGS---GANREDCPSDAYCHIT 180
+ TG + +C G E C +D Y +IT
Sbjct: 1048 KCDQTTG-KCECRENVEGTMCEKC-ADGYFNIT 1078
Score = 168 (64.2 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 50/150 (33%), Positives = 67/150 (44%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ-------- 53
G + C D +Y P L+ ++A C TC C+ +GS DAC+ D +
Sbjct: 396 GFNCERCKDGYYR--PSG--LSHYREDA-C-RTCECDPVGSVSDACVRDDQSAENGQKPG 449
Query: 54 -CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED-CEQMTGRCV 111
C CK G GG +C+RC PGY P C C C++ GSV D C+ + C
Sbjct: 450 DCICKPGFGGRRCERCAPGYRN-------HPT---CEPCPCNRAGSVNFDTCDGAS--CQ 497
Query: 112 CKPGVKGSKCNECLDPNKKLG---PNGCMP 138
CK V+G C+ C L P GC P
Sbjct: 498 CKANVEGIYCDRCKAGTIHLSASNPLGCQP 527
Score = 165 (63.1 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 47/142 (33%), Positives = 58/142 (40%)
Query: 38 NKLGSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQF 96
NK T + E +C +C G C+RC+ GY+ S +S Y D C C C
Sbjct: 371 NKWSITPEGVYEGGGRCLECAHNTEGFNCERCKDGYYRPSGLSHYRED--ACRTCECDPV 428
Query: 97 GSVREDCE---------QMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNG 147
GSV + C Q G C+CKPG G +C C P + P C P PCN
Sbjct: 429 GSVSDACVRDDQSAENGQKPGDCICKPGFGGRRCERCA-PGYRNHPT-CEPC----PCNR 482
Query: 148 EPPVINLQTGVELDCGSGANRE 169
V N T C AN E
Sbjct: 483 AGSV-NFDTCDGASCQCKANVE 503
Score = 154 (59.3 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 36/101 (35%), Positives = 46/101 (45%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC C C+ +GS C T QCKCK GLKCD C G++ P C
Sbjct: 1177 GC-KLCDCSDIGSDGGMCNTFTGQCKCKAAYVGLKCDLCTHGFFNF-------PT---CE 1225
Query: 90 KCGCSQFGSVREDCEQ------MTGRCVCKPGVKGSKCNEC 124
CGC+ G+ C+ G C CK V G+KC++C
Sbjct: 1226 PCGCNAAGTDPLQCKDGQCLCNEIGECPCKKNVHGTKCDQC 1266
Score = 148 (57.2 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 43/130 (33%), Positives = 61/130 (46%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKL-GSTEDACIE-DTEQ---CK- 55
G + + CL + G D + +G NA C + C C + S D+C+ D + C
Sbjct: 1565 GDFCEHCLPGYIG---DAR---EGGANA-C-TKCACPLVENSFSDSCVAVDHGRGYVCNS 1616
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG-CLKCGCSQFGSVREDCEQMTGRCVCKP 114
CK G G C+ C GY+G + I G C C C GS+ C ++G+C CKP
Sbjct: 1617 CKPGYTGQYCETCVAGYYGDPQ------HIGGTCSPCDCHPDGSLHGACNPLSGQCECKP 1670
Query: 115 GVKGSKCNEC 124
GV G C+ C
Sbjct: 1671 GVTGRTCSMC 1680
Score = 143 (55.4 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 42/162 (25%), Positives = 71/162 (43%)
Query: 35 CGCNKLGSTEDACIE--DTEQCKCKQGVG---GLKCDRCEPGYWGLSKISSYAPDIDGCL 89
C CN G+ + I D+E KC + +G G C+ C+ +WG +++ + C
Sbjct: 889 CTCN--GNIDPMGIGNCDSETGKCLKCIGHTTGDSCESCKEHHWGNAQLHT-------CK 939
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEP 149
CGC G+V C + G C CK G++C+ C + + + NGC P + CN
Sbjct: 940 PCGCHTQGAVNPQCSEENGECECKENYIGAQCDRCKENHGDV-ENGC-PACD---CNDTG 994
Query: 150 PVINL--QTGVELDCGSGANREDCPS--DAYCHITQNFARCC 187
+ + Q + +C G + C +Y + T + C
Sbjct: 995 SIGSDCDQVSGQCNCKQGVFGKQCDQCRPSYFNFTDAGCQFC 1036
Score = 134 (52.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 41/138 (29%), Positives = 64/138 (46%)
Query: 43 TEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED 102
T+D + E C+C + G C+ C PGY ++ Y C KC C G+ E+
Sbjct: 730 TQDTLMGGVEVCECPENFAGNSCESCVPGYRRVNN-QLYG---GRCEKCDCH--GN-SEE 782
Query: 103 CEQMTGRCV-CKPGVKGSKCNECL-----DPNK--KLGP-NGC-MPGMEVKPCNGEPPVI 152
C+ TG C+ C+ GS+C C +P++ +LG C P +++ P P I
Sbjct: 783 CDPFTGECLNCRHNTTGSRCELCKPGHVGNPSRGGELGACEQCECPSLDLNP---NPECI 839
Query: 153 NLQTGVELDCGSGANRED 170
+ + V GS A+ ED
Sbjct: 840 STELAV---LGSVASNED 854
Score = 118 (46.6 bits), Expect = 0.00059, P = 0.00059
Identities = 47/164 (28%), Positives = 64/164 (39%)
Query: 22 LAQGPDNA--GCPSTCGCNKLGSTEDACIEDTEQCK-CKQGVGGLKCDRCEPGYWGLSKI 78
L Q D A G C C+ G ++ C DT C C+ G C+ C PGY G ++
Sbjct: 1525 LNQADDIALIGWSEPCSCH--GHSQ-TCNPDTSVCTDCEHNTFGDFCEHCLPGYIGDARE 1581
Query: 79 SSYAPDIDGCLKCGCSQF-GSVREDCEQMT-GR---C-VCKPGVKGSKCNECL-----DP 127
+ C KC C S + C + GR C CKPG G C C+ DP
Sbjct: 1582 GG----ANACTKCACPLVENSFSDSCVAVDHGRGYVCNSCKPGYTGQYCETCVAGYYGDP 1637
Query: 128 NKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
+ +G C P + P N +G + +C G C
Sbjct: 1638 -QHIGGT-CSP-CDCHPDGSLHGACNPLSG-QCECKPGVTGRTC 1677
>UNIPROTKB|F1N8P9 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 EMBL:AADN02048198
EMBL:AADN02048199 EMBL:AADN02048200 EMBL:AADN02048201
EMBL:AADN02048202 EMBL:AADN02048203 EMBL:AADN02048204
EMBL:AADN02048205 EMBL:AADN02048206 EMBL:AADN02048207
EMBL:AADN02048208 EMBL:AADN02048209 EMBL:AADN02048210
EMBL:AADN02048211 EMBL:AADN02048212 EMBL:AADN02048213
EMBL:AADN02048214 EMBL:AADN02048215 IPI:IPI00823129
Ensembl:ENSGALT00000023564 ArrayExpress:F1N8P9 Uniprot:F1N8P9
Length = 3060
Score = 242 (90.2 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 51/138 (36%), Positives = 70/138 (50%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
+G++ + C D +YG K+ C + C C+ GS C +T C CK V
Sbjct: 859 AGLHCEKCADGYYGDAVTEKS---------CRA-CECHVNGSLSSVCHHETGICDCKSDV 908
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSK 120
G KCD+C G++GL ++ GC+ C CSQFGS+ EDC G+C C PGV G K
Sbjct: 909 IGQKCDKCLNGFYGL--LTGL-----GCIPCNCSQFGSISEDCNHQ-GQCHCLPGVAGEK 960
Query: 121 CNECLDPNKKLGPNGCMP 138
C+ C L +GC P
Sbjct: 961 CDRCAHGFHSLQKSGCTP 978
Score = 180 (68.4 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 38/108 (35%), Positives = 52/108 (48%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC C C++ GS + C QC C GV G KCDRC G+ L K GC
Sbjct: 928 GC-IPCNCSQFGSISEDC-NHQGQCHCLPGVAGEKCDRCAHGFHSLQK--------SGCT 977
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN-GC 136
C C+ + +C +G+C+C P +G KC+ C + + L P GC
Sbjct: 978 PCDCAH---TQNNCNADSGQCICPPHTRGPKCDLCEENHWGLSPKLGC 1022
Score = 179 (68.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 37/96 (38%), Positives = 48/96 (50%)
Query: 29 AGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
+GC + C C T++ C D+ QC C G KCD CE +WGLS P + GC
Sbjct: 974 SGC-TPCDC---AHTQNNCNADSGQCICPPHTRGPKCDLCEENHWGLS------PKL-GC 1022
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C CS GS C+ +TG+C CK G C+ C
Sbjct: 1023 KACNCSDSGSDSLQCDVLTGQCQCKAEFGGQNCSRC 1058
Score = 176 (67.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 50/152 (32%), Positives = 71/152 (46%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ------- 53
+GI + C D ++ P ++ D+ P CGC+ GS C++D Q
Sbjct: 350 TGINCEMCADGYFR--PQK--VSPYDDHPCYP--CGCDPFGSLSSVCVKDERQSDSQHGT 403
Query: 54 ----CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED-CEQMTG 108
C+C+ G G KCDRC GY G Y P+ CL+C CS GS+ ED C +
Sbjct: 404 WPGQCQCRDGYTGEKCDRCAFGYRG------Y-PN---CLRCNCSLIGSINEDPCAEP-- 451
Query: 109 RCVCKPGVKGSKCNECLDPN----KKLGPNGC 136
C+CK V+G C+ C P ++ P GC
Sbjct: 452 -CLCKENVEGENCDLC-KPGFYNLQERNPEGC 481
Score = 164 (62.8 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 45/144 (31%), Positives = 63/144 (43%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLG--STEDACI----EDTEQCK 55
G Y +C +YG K + D C S C C + S C+ +D
Sbjct: 1409 GDYCSACAPGYYG-----KVIGSVND---C-SLCACPRANPVSFSPTCVLKGVQDYHCDA 1459
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG--CLKCGCSQFGSVREDCEQMTGRCVCK 113
C G G C++C GY+G P + G C C C+ GSV +C+++TG+C CK
Sbjct: 1460 CLPGYEGQYCEKCSLGYYG-------DPQLPGGSCHLCQCNPSGSVHVNCDRVTGKCPCK 1512
Query: 114 PGVKGSKCNECLDPNKKLGPNGCM 137
GV G C EC +P L C+
Sbjct: 1513 QGVTGQLCEEC-EPRHLLLEEECV 1535
Score = 161 (61.7 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 45/121 (37%), Positives = 53/121 (43%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC + C C+ GS C T QC+CK GG C RC GY Y PD C+
Sbjct: 1021 GCKA-CNCSDSGSDSLQCDVLTGQCQCKAEFGGQNCSRCALGY------RDY-PD---CV 1069
Query: 90 KCGCSQFGSVRE--D-------CEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN---GCM 137
C C G+ E D CE+ TG C CK V G +C+EC L N GC
Sbjct: 1070 ACDCDLSGTKAEMCDDTKGLCGCEEETGICACKENVFGLQCSECKPGTFALSANNALGCT 1129
Query: 138 P 138
P
Sbjct: 1130 P 1130
Score = 145 (56.1 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 48/178 (26%), Positives = 72/178 (40%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQG 59
+G + CL +YG P T + CP + N T + C KC G
Sbjct: 746 TGPFCDQCLPGFYGS-PSQGT-PEDCQPCACPLSSAANNFSPTCQLSEGEGIVCDKCLPG 803
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED--CEQMTGRCV-CKPGV 116
G +C+RC GY+G + P C+ C C+ + +ED C+ +TG+C+ C
Sbjct: 804 YTGSRCERCANGYYG----NPLVPG-QSCVPCECNGNVNPQEDGYCDTITGQCLKCVGNT 858
Query: 117 KGSKCNECLDP--NKKLGPNGCMPGMEVKPCNGE-PPVINLQTGVELDCGSGANREDC 171
G C +C D + C E NG V + +TG+ DC S + C
Sbjct: 859 AGLHCEKCADGYYGDAVTEKSCR-ACECH-VNGSLSSVCHHETGI-CDCKSDVIGQKC 913
Score = 136 (52.9 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 63/207 (30%), Positives = 83/207 (40%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ-C-KCKQ 58
+GI +SCL +Y G G C CN +TE C DT+ C C+
Sbjct: 697 TGISCESCLPGYYR--------VDGILFGGICQPCKCNG-HATE--C--DTQGVCFACQH 743
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC---SQFGSVREDCEQMTGRCV---- 111
G CD+C PG++G S P+ D C C C S + C+ G +
Sbjct: 744 NTTGPFCDQCLPGFYGSP--SQGTPE-D-CQPCACPLSSAANNFSPTCQLSEGEGIVCDK 799
Query: 112 CKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPC--NG-----EPPVINLQTGVELDC-G 163
C PG GS+C C N G N +PG PC NG E + TG L C G
Sbjct: 800 CLPGYTGSRCERCA--NGYYG-NPLVPGQSCVPCECNGNVNPQEDGYCDTITGQCLKCVG 856
Query: 164 S--GANREDCPSDAYCH-ITQNFARCC 187
+ G + E C Y +T+ R C
Sbjct: 857 NTAGLHCEKCADGYYGDAVTEKSCRAC 883
Score = 132 (51.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 28/80 (35%), Positives = 38/80 (47%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDC---EQMT----- 107
C Q G+ C+ C GY+ K+S Y D C CGC FGS+ C E+ +
Sbjct: 345 CSQHTTGINCEMCADGYFRPQKVSPY--DDHPCYPCGCDPFGSLSSVCVKDERQSDSQHG 402
Query: 108 ---GRCVCKPGVKGSKCNEC 124
G+C C+ G G KC+ C
Sbjct: 403 TWPGQCQCRDGYTGEKCDRC 422
Score = 129 (50.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 29/74 (39%), Positives = 42/74 (56%)
Query: 35 CGCNKLGS-TEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C C+ +GS ED C E C CK+ V G CD C+PG++ L + + P+ GC +C C
Sbjct: 435 CNCSLIGSINEDPC---AEPCLCKENVEGENCDLCKPGFYNLQERN---PE--GCTECFC 486
Query: 94 SQFGSVREDCEQMT 107
FG V + C+ +T
Sbjct: 487 --FG-VSDVCDSLT 497
Score = 120 (47.3 bits), Expect = 0.00032, P = 0.00032
Identities = 24/78 (30%), Positives = 34/78 (43%)
Query: 52 EQCKCKQGVGGLKCDRCEPGYWGLS----KISSYAPDIDGCLKCGCSQFGSVREDCEQMT 107
EQC+C G G C C PGY+ + I C+ C C+ E C+ T
Sbjct: 1341 EQCRCPAGYAGFSCQNCAPGYYREKPKEFSVRETHTIIAPCVPCQCNNHS---ETCDPET 1397
Query: 108 GRCV-CKPGVKGSKCNEC 124
G+C+ C+ G C+ C
Sbjct: 1398 GKCLNCRDNTVGDYCSAC 1415
Score = 37 (18.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 16/66 (24%), Positives = 25/66 (37%)
Query: 112 CKPGVKGSKCNE--CLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANRE 169
C PG K E + + + P C+P CN + +TG L+C +
Sbjct: 1357 CAPGYYREKPKEFSVRETHTIIAP--CVPCQ----CNNHSETCDPETGKCLNCRDNTVGD 1410
Query: 170 DCPSDA 175
C + A
Sbjct: 1411 YCSACA 1416
>UNIPROTKB|F1NM47 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005608 "laminin-3 complex" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005911
"cell-cell junction" evidence=IEA] [GO:0007166 "cell surface
receptor signaling pathway" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060445 "branching involved
in salivary gland morphogenesis" evidence=IEA] [GO:0061304 "retinal
blood vessel morphogenesis" evidence=IEA] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0005615
GO:GO:0030155 GO:GO:0007155 GO:GO:0005911 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0005201
GO:GO:0043208 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
OMA:EPFYWRL GO:GO:0005606 GO:GO:0005608 EMBL:AADN02048198
EMBL:AADN02048199 EMBL:AADN02048200 EMBL:AADN02048201
EMBL:AADN02048202 EMBL:AADN02048203 EMBL:AADN02048204
EMBL:AADN02048205 EMBL:AADN02048206 EMBL:AADN02048207
EMBL:AADN02048208 EMBL:AADN02048209 EMBL:AADN02048210
EMBL:AADN02048211 EMBL:AADN02048212 EMBL:AADN02048213
EMBL:AADN02048214 EMBL:AADN02048215 IPI:IPI00587004
Ensembl:ENSGALT00000036890 ArrayExpress:F1NM47 Uniprot:F1NM47
Length = 3061
Score = 242 (90.2 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 51/138 (36%), Positives = 70/138 (50%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
+G++ + C D +YG K+ C + C C+ GS C +T C CK V
Sbjct: 859 AGLHCEKCADGYYGDAVTEKS---------CRA-CECHVNGSLSSVCHHETGICDCKSDV 908
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSK 120
G KCD+C G++GL ++ GC+ C CSQFGS+ EDC G+C C PGV G K
Sbjct: 909 IGQKCDKCLNGFYGL--LTGL-----GCIPCNCSQFGSISEDCNHQ-GQCHCLPGVAGEK 960
Query: 121 CNECLDPNKKLGPNGCMP 138
C+ C L +GC P
Sbjct: 961 CDRCAHGFHSLQKSGCTP 978
Score = 180 (68.4 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 38/108 (35%), Positives = 52/108 (48%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC C C++ GS + C QC C GV G KCDRC G+ L K GC
Sbjct: 928 GC-IPCNCSQFGSISEDC-NHQGQCHCLPGVAGEKCDRCAHGFHSLQK--------SGCT 977
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN-GC 136
C C+ + +C +G+C+C P +G KC+ C + + L P GC
Sbjct: 978 PCDCAH---TQNNCNADSGQCICPPHTRGPKCDLCEENHWGLSPKLGC 1022
Score = 179 (68.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 37/96 (38%), Positives = 48/96 (50%)
Query: 29 AGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
+GC + C C T++ C D+ QC C G KCD CE +WGLS P + GC
Sbjct: 974 SGC-TPCDC---AHTQNNCNADSGQCICPPHTRGPKCDLCEENHWGLS------PKL-GC 1022
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C CS GS C+ +TG+C CK G C+ C
Sbjct: 1023 KACNCSDSGSDSLQCDVLTGQCQCKAEFGGQNCSRC 1058
Score = 176 (67.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 50/152 (32%), Positives = 71/152 (46%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ------- 53
+GI + C D ++ P ++ D+ P CGC+ GS C++D Q
Sbjct: 350 TGINCEMCADGYFR--PQK--VSPYDDHPCYP--CGCDPFGSLSSVCVKDERQSDSQHGT 403
Query: 54 ----CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED-CEQMTG 108
C+C+ G G KCDRC GY G Y P+ CL+C CS GS+ ED C +
Sbjct: 404 WPGQCQCRDGYTGEKCDRCAFGYRG------Y-PN---CLRCNCSLIGSINEDPCAEP-- 451
Query: 109 RCVCKPGVKGSKCNECLDPN----KKLGPNGC 136
C+CK V+G C+ C P ++ P GC
Sbjct: 452 -CLCKENVEGENCDLC-KPGFYNLQERNPEGC 481
Score = 164 (62.8 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 45/144 (31%), Positives = 63/144 (43%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLG--STEDACI----EDTEQCK 55
G Y +C +YG K + D C S C C + S C+ +D
Sbjct: 1409 GDYCSACAPGYYG-----KVIGSVND---C-SLCACPRANPVSFSPTCVLKGVQDYHCDA 1459
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG--CLKCGCSQFGSVREDCEQMTGRCVCK 113
C G G C++C GY+G P + G C C C+ GSV +C+++TG+C CK
Sbjct: 1460 CLPGYEGQYCEKCSLGYYG-------DPQLPGGSCHLCQCNPSGSVHVNCDRVTGKCPCK 1512
Query: 114 PGVKGSKCNECLDPNKKLGPNGCM 137
GV G C EC +P L C+
Sbjct: 1513 QGVTGQLCEEC-EPRHLLLEEECV 1535
Score = 161 (61.7 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 45/121 (37%), Positives = 53/121 (43%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC + C C+ GS C T QC+CK GG C RC GY Y PD C+
Sbjct: 1021 GCKA-CNCSDSGSDSLQCDVLTGQCQCKAEFGGQNCSRCALGY------RDY-PD---CV 1069
Query: 90 KCGCSQFGSVRE--D-------CEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN---GCM 137
C C G+ E D CE+ TG C CK V G +C+EC L N GC
Sbjct: 1070 ACDCDLSGTKAEMCDDTKGLCGCEEETGICACKENVFGLQCSECKPGTFALSANNALGCT 1129
Query: 138 P 138
P
Sbjct: 1130 P 1130
Score = 145 (56.1 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 48/178 (26%), Positives = 72/178 (40%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQG 59
+G + CL +YG P T + CP + N T + C KC G
Sbjct: 746 TGPFCDQCLPGFYGS-PSQGT-PEDCQPCACPLSSAANNFSPTCQLSEGEGIVCDKCLPG 803
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED--CEQMTGRCV-CKPGV 116
G +C+RC GY+G + P C+ C C+ + +ED C+ +TG+C+ C
Sbjct: 804 YTGSRCERCANGYYG----NPLVPG-QSCVPCECNGNVNPQEDGYCDTITGQCLKCVGNT 858
Query: 117 KGSKCNECLDP--NKKLGPNGCMPGMEVKPCNGE-PPVINLQTGVELDCGSGANREDC 171
G C +C D + C E NG V + +TG+ DC S + C
Sbjct: 859 AGLHCEKCADGYYGDAVTEKSCR-ACECH-VNGSLSSVCHHETGI-CDCKSDVIGQKC 913
Score = 136 (52.9 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 63/207 (30%), Positives = 83/207 (40%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ-C-KCKQ 58
+GI +SCL +Y G G C CN +TE C DT+ C C+
Sbjct: 697 TGISCESCLPGYYR--------VDGILFGGICQPCKCNG-HATE--C--DTQGVCFACQH 743
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC---SQFGSVREDCEQMTGRCV---- 111
G CD+C PG++G S P+ D C C C S + C+ G +
Sbjct: 744 NTTGPFCDQCLPGFYGSP--SQGTPE-D-CQPCACPLSSAANNFSPTCQLSEGEGIVCDK 799
Query: 112 CKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPC--NG-----EPPVINLQTGVELDC-G 163
C PG GS+C C N G N +PG PC NG E + TG L C G
Sbjct: 800 CLPGYTGSRCERCA--NGYYG-NPLVPGQSCVPCECNGNVNPQEDGYCDTITGQCLKCVG 856
Query: 164 S--GANREDCPSDAYCH-ITQNFARCC 187
+ G + E C Y +T+ R C
Sbjct: 857 NTAGLHCEKCADGYYGDAVTEKSCRAC 883
Score = 132 (51.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 28/80 (35%), Positives = 38/80 (47%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDC---EQMT----- 107
C Q G+ C+ C GY+ K+S Y D C CGC FGS+ C E+ +
Sbjct: 345 CSQHTTGINCEMCADGYFRPQKVSPY--DDHPCYPCGCDPFGSLSSVCVKDERQSDSQHG 402
Query: 108 ---GRCVCKPGVKGSKCNEC 124
G+C C+ G G KC+ C
Sbjct: 403 TWPGQCQCRDGYTGEKCDRC 422
Score = 129 (50.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 29/74 (39%), Positives = 42/74 (56%)
Query: 35 CGCNKLGS-TEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C C+ +GS ED C E C CK+ V G CD C+PG++ L + + P+ GC +C C
Sbjct: 435 CNCSLIGSINEDPC---AEPCLCKENVEGENCDLCKPGFYNLQERN---PE--GCTECFC 486
Query: 94 SQFGSVREDCEQMT 107
FG V + C+ +T
Sbjct: 487 --FG-VSDVCDSLT 497
Score = 120 (47.3 bits), Expect = 0.00032, P = 0.00032
Identities = 24/78 (30%), Positives = 34/78 (43%)
Query: 52 EQCKCKQGVGGLKCDRCEPGYWGLS----KISSYAPDIDGCLKCGCSQFGSVREDCEQMT 107
EQC+C G G C C PGY+ + I C+ C C+ E C+ T
Sbjct: 1341 EQCRCPAGYAGFSCQNCAPGYYREKPKEFSVRETHTIIAPCVPCQCNNHS---ETCDPET 1397
Query: 108 GRCV-CKPGVKGSKCNEC 124
G+C+ C+ G C+ C
Sbjct: 1398 GKCLNCRDNTVGDYCSAC 1415
Score = 37 (18.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 16/66 (24%), Positives = 25/66 (37%)
Query: 112 CKPGVKGSKCNE--CLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANRE 169
C PG K E + + + P C+P CN + +TG L+C +
Sbjct: 1357 CAPGYYREKPKEFSVRETHTIIAP--CVPCQ----CNNHSETCDPETGKCLNCRDNTVGD 1410
Query: 170 DCPSDA 175
C + A
Sbjct: 1411 YCSACA 1416
>UNIPROTKB|P24043 [details] [associations]
symbol:LAMA2 "Laminin subunit alpha-2" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=TAS] [GO:0007517 "muscle organ development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0031012
"extracellular matrix" evidence=ISS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0007411 GO:GO:0030155 GO:GO:0005198
GO:GO:0007155 GO:GO:0042383 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0007517 PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0005604
Pfam:PF02210 GO:GO:0045995 GO:GO:0032224 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
HOGENOM:HOG000293201 HOVERGEN:HBG052298 KO:K05637 GO:GO:0005606
EMBL:Z26653 EMBL:U66796 EMBL:U66733 EMBL:U66734 EMBL:U66735
EMBL:U66736 EMBL:U66737 EMBL:U66738 EMBL:U66739 EMBL:U66740
EMBL:U66741 EMBL:U66742 EMBL:U66743 EMBL:U66745 EMBL:U66746
EMBL:U66747 EMBL:U66748 EMBL:U66749 EMBL:U66750 EMBL:U66751
EMBL:U66752 EMBL:U66753 EMBL:U66754 EMBL:U66755 EMBL:U66756
EMBL:U66757 EMBL:U66758 EMBL:U66759 EMBL:U66760 EMBL:U66761
EMBL:U66762 EMBL:U66763 EMBL:U66764 EMBL:U66765 EMBL:U66766
EMBL:U66768 EMBL:U66769 EMBL:U66770 EMBL:U66771 EMBL:U66772
EMBL:U66773 EMBL:U66774 EMBL:U66775 EMBL:U66776 EMBL:U66777
EMBL:U66778 EMBL:U66779 EMBL:U66780 EMBL:U66781 EMBL:U66782
EMBL:U66783 EMBL:U66784 EMBL:U66785 EMBL:U66786 EMBL:U66787
EMBL:U66788 EMBL:U66789 EMBL:U66790 EMBL:U66791 EMBL:U66792
EMBL:U66793 EMBL:U66794 EMBL:U66795 EMBL:AL583853 EMBL:AL356124
EMBL:AL445439 EMBL:AL513527 EMBL:AL590613 EMBL:AL669984
EMBL:AL589927 EMBL:M59832 IPI:IPI00873889 PIR:PX0082
RefSeq:NP_000417.2 RefSeq:NP_001073291.1 UniGene:Hs.200841
ProteinModelPortal:P24043 SMR:P24043 DIP:DIP-42562N IntAct:P24043
MINT:MINT-2635209 STRING:P24043 PhosphoSite:P24043 DMDM:215274259
PaxDb:P24043 PRIDE:P24043 DNASU:3908 Ensembl:ENST00000421865
GeneID:3908 KEGG:hsa:3908 UCSC:uc003qbn.3 CTD:3908
GeneCards:GC06P129246 HGNC:HGNC:6482 HPA:CAB040310 MIM:156225
MIM:607855 neXtProt:NX_P24043 Orphanet:258 PharmGKB:PA30271
eggNOG:COG0419 OMA:NCNSFGS OrthoDB:EOG4RFKRM PhylomeDB:P24043
GenomeRNAi:3908 NextBio:15339 ArrayExpress:P24043 Bgee:P24043
CleanEx:HS_LAMA2 Genevestigator:P24043 GermOnline:ENSG00000196569
Uniprot:P24043
Length = 3122
Score = 229 (85.7 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 48/136 (35%), Positives = 66/136 (48%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
+G Y + C D ++G D K C C CN GS + C T QC+C+ V
Sbjct: 894 TGRYCELCADGYFGDAVDAKN---------C-QPCRCNAGGSFSEVCHSQTGQCECRANV 943
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSK 120
G +CD+C+ G +GL GC+ C C+ FGS DCE+ +G+C C+PGV G K
Sbjct: 944 QGQRCDKCKAGTFGLQSAR-------GCVPCNCNSFGSKSFDCEE-SGQCWCQPGVTGKK 995
Query: 121 CNECLDPNKKLGPNGC 136
C+ C GC
Sbjct: 996 CDRCAHGYFNFQEGGC 1011
Score = 179 (68.1 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 43/123 (34%), Positives = 57/123 (46%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC + C C+ LG+ C T +C C G KC +C P WG S I++ GC
Sbjct: 1010 GC-TACECSHLGNN---CDPKTGRCICPPNTIGEKCSKCAPNTWGHS-ITT------GCK 1058
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGP-NGC---MPGMEVKPC 145
C CS GS+ C TG+C C P G+KC EC + N C +PG + C
Sbjct: 1059 ACNCSTVGSLDFQCNVNTGQCNCHPKFSGAKCTECSRGHWNYPRCNLCDCFLPGTDATTC 1118
Query: 146 NGE 148
+ E
Sbjct: 1119 DSE 1121
Score = 174 (66.3 bits), Expect = 9.6e-16, Sum P(2) = 9.6e-16
Identities = 43/133 (32%), Positives = 60/133 (45%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ------- 53
+GI ++C D ++ + P+ C C+ +GS + C++D +
Sbjct: 386 AGINCETCTDGFF------RPKGVSPNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAP 439
Query: 54 --CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV 111
C CK G GG+ CDRC GY G Y PD C C CS GS ED G C+
Sbjct: 440 GSCHCKTGFGGVSCDRCARGYTG------Y-PD---CKACNCSGLGSKNED--PCFGPCI 487
Query: 112 CKPGVKGSKCNEC 124
CK V+G C+ C
Sbjct: 488 CKENVEGGDCSRC 500
Score = 169 (64.5 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 40/125 (32%), Positives = 55/125 (44%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCK-CKQG 59
+G + + C +YG K L CP N + A D +C C +G
Sbjct: 1444 AGDFCERCALGYYGIV---KGLPNDCQQCACPLISSSNNFSPSCVAEGLDDYRCTACPRG 1500
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGS 119
G C+RC PGY G S P C +C C +GS+ C+ +TG C C+PG G
Sbjct: 1501 YEGQYCERCAPGYTG----SPGNPG-GSCQECECDPYGSLPVPCDPVTGFCTCRPGATGR 1555
Query: 120 KCNEC 124
KC+ C
Sbjct: 1556 KCDGC 1560
Score = 158 (60.7 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 34/113 (30%), Positives = 49/113 (43%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC + C C+ +GS + C +T QC C G KC C G+W + + + G
Sbjct: 1056 GCKA-CNCSTVGSLDFQCNVNTGQCNCHPKFSGAKCTECSRGHWNYPRCNLCDCFLPGTD 1114
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC------LDPNKKLGPNGC 136
C + + C TG+C CK V+G C+ C LD LG + C
Sbjct: 1115 ATTCDS-ETKKCSCSDQTGQCTCKVNVEGIHCDRCRPGKFGLDAKNPLGCSSC 1166
Score = 158 (60.7 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 39/122 (31%), Positives = 51/122 (41%)
Query: 26 PDNAGCPSTCGCNKLGSTEDACIEDTEQCK-CKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
P + P C N S +C + C CK G G C+ C GY+G A D
Sbjct: 858 PGGSCQPCQCNDNLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGYFG------DAVD 911
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKP 144
C C C+ GS E C TG+C C+ V+G +C++C K G G P
Sbjct: 912 AKNCQPCRCNAGGSFSEVCHSQTGQCECRANVQGQRCDKC-----KAGTFGLQSARGCVP 966
Query: 145 CN 146
CN
Sbjct: 967 CN 968
Score = 146 (56.5 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 52/185 (28%), Positives = 71/185 (38%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ---CK-CK 57
G Y CL +YG K ++ CP N T C D C C
Sbjct: 782 GPYCDKCLPGFYG--EPTKGTSEDCQPCACPLNIPSNNFSPT---CHLDRSLGLICDGCP 836
Query: 58 QGVGGLKCDRCEPGYWGLSKISSYAPDIDG--CLKCGCSQ---FGSVREDCEQMTGRC-V 111
G G +C+RC GY+G P + G C C C+ F S+ C+ ++G C +
Sbjct: 837 VGYTGPRCERCAEGYFG-------QPSVPGGSCQPCQCNDNLDF-SIPGSCDSLSGSCLI 888
Query: 112 CKPGVKGSKCNECLDP--NKKLGPNGCMPGMEVKPCN--GE-PPVINLQTGVELDCGSGA 166
CKPG G C C D + C P CN G V + QTG + +C +
Sbjct: 889 CKPGTTGRYCELCADGYFGDAVDAKNCQPCR----CNAGGSFSEVCHSQTG-QCECRANV 943
Query: 167 NREDC 171
+ C
Sbjct: 944 QGQRC 948
Score = 115 (45.5 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 25/63 (39%), Positives = 33/63 (52%)
Query: 46 ACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQ 105
+C + T QC CK V G+ CDRC PG +GL A + GC C C FG+ + C +
Sbjct: 1126 SCSDQTGQCTCKVNVEGIHCDRCRPGKFGLD-----AKNPLGCSSCYC--FGTTTQ-CSE 1177
Query: 106 MTG 108
G
Sbjct: 1178 AKG 1180
Score = 73 (30.8 bits), Expect = 9.6e-16, Sum P(2) = 9.6e-16
Identities = 23/84 (27%), Positives = 35/84 (41%)
Query: 110 CVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCN--GEPPVINLQTGVELDCGS--- 164
C C PG GS C C ++++ NG + G +PC G + TG L+C
Sbjct: 724 CQCPPGYTGSSCESCWPRHRRV--NGTIFGGICEPCQCFGHAESCDDVTGECLNCKDHTG 781
Query: 165 GANREDCPSDAYCHITQNFARCCR 188
G + C Y T+ + C+
Sbjct: 782 GPYCDKCLPGFYGEPTKGTSEDCQ 805
Score = 45 (20.9 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 135 GCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSD 174
GC+ +++ G+P +N +EL G CP++
Sbjct: 3086 GCIRSLKLTKGTGKPLEVNFAKALEL---RGVQPVSCPAN 3122
Score = 35 (17.4 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 8/22 (36%), Positives = 9/22 (40%)
Query: 129 KKLGPNGCMPGMEVKPCNGEPP 150
KKL G P + P PP
Sbjct: 2658 KKLFVGGAPPEFQPSPLRNIPP 2679
>MGI|MGI:99915 [details] [associations]
symbol:Lamb3 "laminin, beta 3" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISS;IDA] [GO:0005610 "laminin-5
complex" evidence=IDA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=ISO] [GO:0050873
"brown fat cell differentiation" evidence=IDA] MGI:MGI:99915
GO:GO:0050873 GO:GO:0007155 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 EMBL:CH466555 GO:GO:0005610
GeneTree:ENSGT00620000087753 CTD:3914 eggNOG:NOG289025
HOGENOM:HOG000113279 HOVERGEN:HBG052302 KO:K06244 OMA:RSQMEED
OrthoDB:EOG4JDH5Z ChiTaRS:LAMB3 EMBL:U43298 EMBL:AK155769
EMBL:BC008516 IPI:IPI00117093 RefSeq:NP_032510.2 UniGene:Mm.435441
ProteinModelPortal:Q61087 SMR:Q61087 STRING:Q61087
PhosphoSite:Q61087 PaxDb:Q61087 PRIDE:Q61087
Ensembl:ENSMUST00000016315 Ensembl:ENSMUST00000159955 GeneID:16780
KEGG:mmu:16780 InParanoid:Q91V90 NextBio:290632 Bgee:Q61087
CleanEx:MM_LAMB3 Genevestigator:Q61087
GermOnline:ENSMUSG00000026639 Uniprot:Q61087
Length = 1168
Score = 233 (87.1 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 62/164 (37%), Positives = 81/164 (49%)
Query: 35 CGCNKLGSTEDA-CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C C+ G+ + A C T QC CK+ V G +CD C+PG+ GL+ +A + GC C C
Sbjct: 376 CECDPDGAVQGAPCDRLTGQCVCKEYVQGERCDLCKPGFTGLT----FA-NPKGCHACDC 430
Query: 94 SQFGSVRED--CEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN-GCMPGMEVKPCNGEPP 150
S G+ R+D CE+ TGRC+C P V G KC++C + KL GC P P N
Sbjct: 431 SILGA-RKDMPCEEETGRCLCLPNVVGPKCDQCAPSHWKLASGLGCEP-CACDPRNSLSS 488
Query: 151 VINLQTGV----E----LDCGSGANREDCPSDAYCHITQNFARC 186
N TG E L C S A R+ CP Y H+ C
Sbjct: 489 QCNQFTGQCPCREGFGGLTCSSAAIRQ-CPDQTYGHVATGCRAC 531
Score = 181 (68.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 36/110 (32%), Positives = 51/110 (46%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P + LA G GC C C+ S C + T QC C++G GGL C
Sbjct: 462 CAPSHWKLASG---LGC-EPCACDPRNSLSSQCNQFTGQCPCREGFGGLTCSSAAIRQ-- 515
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
+Y GC C C G+ C++ +GRC+C+PG G +C++C
Sbjct: 516 -CPDQTYGHVATGCRACDCDFRGTEGPGCDKASGRCLCRPGFTGPRCDQC 564
Score = 145 (56.1 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 40/127 (31%), Positives = 58/127 (45%)
Query: 23 AQGPDNAGCPSTCGCNKLGST--EDACIEDTEQ------C-KCKQGVGGLKCDRCEPGYW 73
A+G D C C CN T D + Q C C+ G C+RC+ Y+
Sbjct: 302 AEGQDTHEC-QRCDCNGHSETCHFDPAVFAASQGTNGGVCDNCRDHTEGKNCERCQLHYF 360
Query: 74 GLSKISSYAPDIDGCLKCGCSQFGSVR-EDCEQMTGRCVCKPGVKGSKCNECLDPNKKL- 131
+ S AP + C+ C C G+V+ C+++TG+CVCK V+G +C+ C L
Sbjct: 361 RNRRPS--APIHETCIPCECDPDGAVQGAPCDRLTGQCVCKEYVQGERCDLCKPGFTGLT 418
Query: 132 --GPNGC 136
P GC
Sbjct: 419 FANPKGC 425
>ZFIN|ZDB-GENE-021226-3 [details] [associations]
symbol:lamc1 "laminin, gamma 1" species:7955 "Danio
rerio" [GO:0007519 "skeletal muscle tissue development"
evidence=IMP] [GO:0007634 "optokinetic behavior" evidence=IMP]
[GO:0050908 "detection of light stimulus involved in visual
perception" evidence=IMP] [GO:0007517 "muscle organ development"
evidence=IMP] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IMP] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] ZFIN:ZDB-GENE-021226-3 GO:GO:0007155
PROSITE:PS00022 GO:GO:0007517 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0050908 GO:GO:0031290 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0007634 eggNOG:NOG235720 GeneTree:ENSGT00690000102103
HOGENOM:HOG000019301 EMBL:AF468048 EMBL:BX681417 EMBL:BX571812
IPI:IPI00496826 RefSeq:NP_775384.1 UniGene:Dr.132970
ProteinModelPortal:Q1LVF0 SMR:Q1LVF0 STRING:Q1LVF0
Ensembl:ENSDART00000004277 GeneID:286832 KEGG:dre:286832 CTD:3915
HOVERGEN:HBG100808 InParanoid:Q8JHV8 KO:K05635 OMA:EATDYPW
OrthoDB:EOG49GKFS NextBio:20806483 ArrayExpress:Q1LVF0 Bgee:Q1LVF0
Uniprot:Q1LVF0
Length = 1593
Score = 234 (87.4 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 49/111 (44%), Positives = 60/111 (54%)
Query: 34 TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
+CGCN +GS C ++T +C CK GV G KCDRC+PGY LS+ GC C C
Sbjct: 381 SCGCNPVGSLSTQC-DNTGRCSCKPGVMGDKCDRCQPGYHSLSEA--------GCRPCSC 431
Query: 94 SQFGSVREDCEQMTGRCVCKPGVKGSKCNEC------LDPNKKLGPNGCMP 138
+ GS +E C+ TGRC CK V G C+ C LDP P GC P
Sbjct: 432 NPAGSTQE-CDVQTGRCQCKENVDGFNCDRCKLGYFNLDPQN---PQGCTP 478
Score = 197 (74.4 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 40/95 (42%), Positives = 52/95 (54%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC C CN +GST C + QC+C+ GV G C+RCE ++G S SS GC
Sbjct: 915 GC-ERCNCNPIGSTNGQCDIVSGQCECQPGVTGQHCERCEVNFFGFS--SS------GCK 965
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C C GS C++ GRC C+PG GS+C+ C
Sbjct: 966 PCDCDPEGSESAQCKE-DGRCHCRPGFVGSRCDMC 999
Score = 182 (69.1 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 54/170 (31%), Positives = 71/170 (41%)
Query: 12 WYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE---------QCK-CKQGVG 61
+Y P + A+ P N P C CN G + + C D E C+ C
Sbjct: 306 FYNDRPWRRATAENP-NECLP--CNCN--GKSAE-CYFDPELYRATGHGGHCRNCADNTD 359
Query: 62 GLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
G KC+RC Y+ + S CL CGC+ GS+ C+ TGRC CKPGV G KC
Sbjct: 360 GPKCERCLANYY--REASGQR-----CLSCGCNPVGSLSTQCDN-TGRCSCKPGVMGDKC 411
Query: 122 NECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
+ C L GC P P G ++QTG C + +C
Sbjct: 412 DRCQPGYHSLSEAGCRP-CSCNPA-GSTQECDVQTG-RCQCKENVDGFNC 458
Score = 177 (67.4 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 45/151 (29%), Positives = 66/151 (43%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTE--DACIEDTEQCKCKQ 58
+G++ C +YG D + A D C C C+ G+ + AC + T QC C
Sbjct: 841 AGVFCDRCKQGFYG---DARA-ANVADK--C-KPCKCSPYGTVDRQTACSQVTGQCPCLP 893
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
V C CE G++ L GC +C C+ GS C+ ++G+C C+PGV G
Sbjct: 894 HVINRDCGACELGFYNLQSGK-------GCERCNCNPIGSTNGQCDIVSGQCECQPGVTG 946
Query: 119 SKCNECLDPNKKLGPNGCMPGMEVKPCNGEP 149
C C +GC KPC+ +P
Sbjct: 947 QHCERCEVNFFGFSSSGC------KPCDCDP 971
Score = 171 (65.3 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 48/157 (30%), Positives = 73/157 (46%)
Query: 24 QGPDNAGCPSTCGCNKL--GSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISS 80
+GP A C + C CN + C ++ +C KC G+ CDRC+ G++G ++ ++
Sbjct: 803 KGPVRA-CRA-CSCNNNIDPNAVGNCNRESGECLKCIYNTAGVFCDRCKQGFYGDARAAN 860
Query: 81 YAPDIDGCLKCGCSQFGSV-RED-CEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP 138
A D C C CS +G+V R+ C Q+TG+C C P V C C +LG
Sbjct: 861 VA---DKCKPCKCSPYGTVDRQTACSQVTGQCPCLPHVINRDCGAC-----ELGFYNLQS 912
Query: 139 GMEVKPCNGEP-PVINLQTGV---ELDCGSGANREDC 171
G + CN P N Q + + +C G + C
Sbjct: 913 GKGCERCNCNPIGSTNGQCDIVSGQCECQPGVTGQHC 949
Score = 153 (58.9 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 38/99 (38%), Positives = 50/99 (50%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P +L++ AGC C CN GST++ C T +C+CK+ V G CDRC+ GY+
Sbjct: 414 CQPGYHSLSE----AGC-RPCSCNPAGSTQE-CDVQTGRCQCKENVDGFNCDRCKLGYFN 467
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCK 113
L + P GC C C Q +V CE G V K
Sbjct: 468 LDPQN---PQ--GCTPCFCFQHSTV---CESADGYSVHK 498
Score = 140 (54.3 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 41/139 (29%), Positives = 59/139 (42%)
Query: 33 STCG-CNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKC 91
STC CN G + D C +T C C+ GL C+RC+ G++G S + S + D C C
Sbjct: 703 STCERCNCNGHS-DTCDPETGMCNCQHNTAGLSCERCKDGFYGDSTVGS-SSDCKAC-PC 759
Query: 92 GCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNECLDP--NKKLGPNGCMPGMEVKPCNG- 147
+V ++ C C G G +C C D LG G + CN
Sbjct: 760 PAGATCAVVPKTNEVV--CTNCPTGTTGKRCELCDDGFFGDPLGEKGPVRACRACSCNNN 817
Query: 148 -EPPVI---NLQTGVELDC 162
+P + N ++G L C
Sbjct: 818 IDPNAVGNCNRESGECLKC 836
>UNIPROTKB|F1MMT2 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042383 "sarcolemma" evidence=IEA] [GO:0032224
"positive regulation of synaptic transmission, cholinergic"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0007411 GO:GO:0030155 GO:GO:0007155 GO:GO:0042383
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 OMA:NCNSFGS
EMBL:DAAA02026607 EMBL:DAAA02026593 EMBL:DAAA02026594
EMBL:DAAA02026595 EMBL:DAAA02026596 EMBL:DAAA02026597
EMBL:DAAA02026598 EMBL:DAAA02026599 EMBL:DAAA02026600
EMBL:DAAA02026601 EMBL:DAAA02026602 EMBL:DAAA02026603
EMBL:DAAA02026604 EMBL:DAAA02026605 EMBL:DAAA02026606
IPI:IPI00924129 Ensembl:ENSBTAT00000061257 Uniprot:F1MMT2
Length = 3085
Score = 222 (83.2 bits), Expect = 7.5e-18, Sum P(2) = 7.5e-18
Identities = 45/121 (37%), Positives = 57/121 (47%)
Query: 16 CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGL 75
C D D C C CN GS + C T QC+CK V G +CD C+P +GL
Sbjct: 864 CADGY-FGDAVDAKNC-QPCHCNANGSFSEVCHAQTGQCECKPNVQGRRCDECKPETFGL 921
Query: 76 SKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNG 135
GC+ C C+ FGS DCE+ +G+C C+PGV G KC+ C G
Sbjct: 922 QSAR-------GCIPCNCNSFGSKSFDCEE-SGQCWCQPGVTGKKCDRCAHGYFNFQEGG 973
Query: 136 C 136
C
Sbjct: 974 C 974
Score = 204 (76.9 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 43/110 (39%), Positives = 56/110 (50%)
Query: 16 CPDNKTLAQGPDNA-GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C + K G +A GC C CN GS C E++ QC C+ GV G KCDRC GY+
Sbjct: 911 CDECKPETFGLQSARGC-IPCNCNSFGSKSFDC-EESGQCWCQPGVTGKKCDRCAHGYFN 968
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
+ GC C CS G+ +C+ TGRC+C P G KC++C
Sbjct: 969 FQE--------GGCTACDCSHLGN---NCDPKTGRCICPPNTIGEKCSKC 1007
Score = 171 (65.3 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 36/95 (37%), Positives = 47/95 (49%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC + C C+ LG+ C T +C C G KC +C P WG S I++ GC
Sbjct: 973 GC-TACDCSHLGNN---CDPKTGRCICPPNTIGEKCSKCAPRTWGHS-ITT------GCK 1021
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C CS GS+ C+ G+C C P G+KC EC
Sbjct: 1022 ACNCSSVGSLDFQCDLNMGQCKCHPKFSGAKCTEC 1056
Score = 170 (64.9 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 40/115 (34%), Positives = 51/115 (44%)
Query: 26 PDNAGCPSTCGCNKLGSTEDACIEDTEQCK-CKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
P + P C N S +C + C CK G G C+ C GY+G A D
Sbjct: 821 PGGSCQPCQCNDNLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGYFG------DAVD 874
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKL-GPNGCMP 138
C C C+ GS E C TG+C CKP V+G +C+EC L GC+P
Sbjct: 875 AKNCQPCHCNANGSFSEVCHAQTGQCECKPNVQGRRCDECKPETFGLQSARGCIP 929
Score = 162 (62.1 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 45/151 (29%), Positives = 62/151 (41%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIE---DTEQCK-C 56
+G + + C +YG K L CP N + CI D +C C
Sbjct: 1407 AGDFCERCALGYYGIV---KGLPNDCQQCACPLISSSNNFSPS---CIMEGLDDYRCTAC 1460
Query: 57 KQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGV 116
+G G C+RC PGY G S +P C +C C GS+ C+ + G C C+PG
Sbjct: 1461 PRGYEGKYCERCAPGYAG----SPSSPG-GSCQECECDPHGSLPVPCDPVMGICTCRPGA 1515
Query: 117 KGSKCNECLDPNKKLGPNGCMPGMEVKPCNG 147
G KC+ C + + G G E C G
Sbjct: 1516 TGPKCDGCEQGHAREGMECVFCGDE---CTG 1543
Score = 161 (61.7 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 42/133 (31%), Positives = 59/133 (44%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ------- 53
+GI ++C+D ++ + P+ C C+ +GS + C++D +
Sbjct: 349 AGINCETCIDGFF------RPKGVSPNYPRPCQPCHCDPVGSLNEVCVKDEKHARRGLAP 402
Query: 54 --CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV 111
C CK G G+ CDRC GY G Y PD C C CS GS ED G C
Sbjct: 403 GSCHCKPGFRGVSCDRCARGYIG------Y-PD---CKPCNCSGAGSTNED--PCFGPCN 450
Query: 112 CKPGVKGSKCNEC 124
CK V+G C+ C
Sbjct: 451 CKENVEGGDCSRC 463
Score = 156 (60.0 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 35/113 (30%), Positives = 48/113 (42%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC + C C+ +GS + C + QCKC G KC C G+W S + G
Sbjct: 1019 GCKA-CNCSSVGSLDFQCDLNMGQCKCHPKFSGAKCTECTRGHWNYPHCSPCDCFLSGTD 1077
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC------LDPNKKLGPNGC 136
C + + C TG+C CK V+G C+ C L+ LG N C
Sbjct: 1078 DSTCD-LETKKCSCIDQTGQCTCKVNVEGIHCDRCRPGKFGLEAKNPLGCNSC 1129
Score = 149 (57.5 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 52/191 (27%), Positives = 73/191 (38%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ---C-KCK 57
G Y CL +YG K + CP N T C D C +C
Sbjct: 745 GPYCDKCLPGFYG--DPTKGTSDDCQPCACPLNSPSNNFSPT---CHMDRSLGLICDECP 799
Query: 58 QGVGGLKCDRCEPGYWGLSKISSYAPDIDG--CLKCGCSQ---FGSVREDCEQMTGRC-V 111
G G +C+RC GY+G P + G C C C+ F S+ C+ ++G C +
Sbjct: 800 VGYSGQRCERCAEGYFG-------QPSVPGGSCQPCQCNDNLDF-SIPGSCDSLSGSCLI 851
Query: 112 CKPGVKGSKCNECLDP--NKKLGPNGCMPGMEVKPCNGE-PPVINLQTGVELDCG---SG 165
CKPG G C C D + C P NG V + QTG + +C G
Sbjct: 852 CKPGTTGRYCELCADGYFGDAVDAKNCQP-CHCN-ANGSFSEVCHAQTG-QCECKPNVQG 908
Query: 166 ANREDCPSDAY 176
++C + +
Sbjct: 909 RRCDECKPETF 919
Score = 128 (50.1 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 38/110 (34%), Positives = 49/110 (44%)
Query: 1 SGIYLKSCLDS-W-YGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQ 58
SG C W Y C G D+ STC L + + +CI+ T QC CK
Sbjct: 1049 SGAKCTECTRGHWNYPHCSPCDCFLSGTDD----STCD---LETKKCSCIDQTGQCTCKV 1101
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTG 108
V G+ CDRC PG +GL A + GC C C FG+ + C + G
Sbjct: 1102 NVEGIHCDRCRPGKFGLE-----AKNPLGCNSCYC--FGATTQ-CSEAKG 1143
Score = 45 (20.9 bits), Expect = 7.5e-18, Sum P(2) = 7.5e-18
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 135 GCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSD 174
GC+ +++ G+P +N +EL G CP++
Sbjct: 3049 GCIRSLKLTKGTGKPLEVNFAKALEL---RGVQPVSCPAN 3085
>MGI|MGI:1918264 [details] [associations]
symbol:Megf9 "multiple EGF-like-domains 9" species:10090
"Mus musculus" [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001368
SMART:SM00208 MGI:MGI:1918264 GO:GO:0016021 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 CTD:1955 eggNOG:NOG302694
HOVERGEN:HBG080442 EMBL:AK035987 EMBL:AK039319 EMBL:AK052434
EMBL:AK122378 IPI:IPI00221701 RefSeq:NP_766282.1 UniGene:Mm.251188
ProteinModelPortal:Q8BH27 SMR:Q8BH27 STRING:Q8BH27
PhosphoSite:Q8BH27 PaxDb:Q8BH27 PRIDE:Q8BH27
Ensembl:ENSMUST00000107359 GeneID:230316 KEGG:mmu:230316
GeneTree:ENSGT00680000100051 HOGENOM:HOG000203602 InParanoid:Q8BH27
OMA:NGCLPCQ NextBio:379877 Bgee:Q8BH27 CleanEx:MM_MEGF9
Genevestigator:Q8BH27 GermOnline:ENSMUSG00000039270 Uniprot:Q8BH27
Length = 600
Score = 224 (83.9 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 50/156 (32%), Positives = 73/156 (46%)
Query: 17 PDNKTLAQGPDNAGCPSTCGCNKLGSTE-DACIEDTEQCKCKQGVGGLKCDRCEPGYWGL 75
P + + P + C C+++GS + C + T QC C G GL CD C+ G++ L
Sbjct: 184 PPTAPVTEAPTSPPPEHMCNCSEVGSLDVKRCNQTTGQCDCHVGYQGLHCDTCKEGFY-L 242
Query: 76 SKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNG 135
+ + CL C CS G+V C +G C CK GV GS C++C D + G G
Sbjct: 243 NHT------VGLCLPCHCSPHGAVSILCNS-SGNCQCKVGVTGSMCDKCQDGHYGFGKTG 295
Query: 136 CMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
C+P CN ++ TG L+C + E C
Sbjct: 296 CLPCQ----CNNRSDSCDVHTGACLNCQENSKGEHC 327
Score = 115 (45.5 bits), Expect = 0.00021, P = 0.00021
Identities = 32/109 (29%), Positives = 47/109 (43%)
Query: 26 PDNAGCPSTCGCNKLGSTEDACIEDTE---QC-KCKQGVGGLKCDRCEPGYWGLSKISSY 81
PD A C C+ + ST + IE E C +CK G G C++CE GY+ I
Sbjct: 338 PDAAKQCHRCPCSAVTSTGNCTIESGELEPTCDQCKDGYTGQNCNKCENGYYNSDSI--- 394
Query: 82 APDIDGCLKCGC-SQFGSVRED--CEQMTGRCV-CKPGVKGSKCNECLD 126
C +C C ++ C+ +G C+ C G C +CL+
Sbjct: 395 ------CTQCECHGHVDPIKTPKICKPESGECINCLHNTTGFWCEKCLE 437
>FB|FBgn0261800 [details] [associations]
symbol:LanB1 "LanB1" species:7227 "Drosophila melanogaster"
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0005604
"basement membrane" evidence=ISS;NAS;IDA] [GO:0005605 "basal
lamina" evidence=IDA] [GO:0009888 "tissue development"
evidence=NAS] [GO:0009887 "organ morphogenesis" evidence=NAS]
[GO:0048598 "embryonic morphogenesis" evidence=NAS] [GO:0016477
"cell migration" evidence=IMP] [GO:0070831 "basement membrane
assembly" evidence=IMP] [GO:0048513 "organ development"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
GO:GO:0016477 GO:GO:0008406 EMBL:AE014134 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0005605 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 eggNOG:NOG241384 EMBL:M95811 EMBL:M19525
EMBL:BT015222 EMBL:AY095001 PIR:A28783 RefSeq:NP_476618.1
RefSeq:NP_723319.1 ProteinModelPortal:P11046 SMR:P11046
IntAct:P11046 MINT:MINT-749338 STRING:P11046 PaxDb:P11046
PRIDE:P11046 EnsemblMetazoa:FBtr0079490 EnsemblMetazoa:FBtr0079491
GeneID:34068 KEGG:dme:Dmel_CG7123 CTD:34068 FlyBase:FBgn0261800
GeneTree:ENSGT00620000087753 InParanoid:P11046 KO:K05636
OMA:DQCAENH OrthoDB:EOG4ZPC92 PhylomeDB:P11046 ChiTaRS:LanB1
GenomeRNAi:34068 NextBio:786713 Bgee:P11046 GermOnline:CG7123
GO:GO:0070831 InterPro:IPR013015 PROSITE:PS51116 Uniprot:P11046
Length = 1788
Score = 229 (85.7 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 48/122 (39%), Positives = 65/122 (53%)
Query: 8 CLDSWYG--C--CPDNK-TLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGG 62
CL + G C C +N +A G GC S C C+ +G+ + C T QC+CK G GG
Sbjct: 1066 CLPNVQGVRCDQCAENHWKIASGE---GCES-CNCDPIGALHEQCNSYTGQCQCKPGFGG 1121
Query: 63 LKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN 122
C++C+ YWG P+ + C C C QFG+ C++ TG CVC G+ G KCN
Sbjct: 1122 RACNQCQAHYWG-------NPN-EKCQPCECDQFGAADFQCDRETGNCVCHEGIGGYKCN 1173
Query: 123 EC 124
EC
Sbjct: 1174 EC 1175
Score = 214 (80.4 bits), Expect = 7.0e-16, P = 7.0e-16
Identities = 49/146 (33%), Positives = 65/146 (44%)
Query: 33 STCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
S C CN GS C + C+CK V G +CD+C PG +G + P+ GC C
Sbjct: 787 SMCNCNPTGSLSKVCESNGGYCQCKPNVVGRQCDQCAPGTYG------FGPE--GCKACD 838
Query: 93 CSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVI 152
C+ GS + C+ +TG+C C P G +CN+C P P C V CNG
Sbjct: 839 CNSIGSKDKYCDLITGQCQCVPNTYGRECNQC-QPGYWNFPE-C----RVCQCNGHAATC 892
Query: 153 NLQTGVELDCGSGANREDCPS--DAY 176
+ G +DC C S D Y
Sbjct: 893 DPIQGTCIDCQDSTTGYSCDSCLDGY 918
Score = 201 (75.8 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 41/109 (37%), Positives = 55/109 (50%)
Query: 35 CGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
C C+ LG+ C T QC C V G++CD+C +W KI+S +GC C
Sbjct: 1043 CECDFLGTNNTIAHCDRFTGQCPCLPNVQGVRCDQCAENHW---KIASG----EGCESCN 1095
Query: 93 CSQFGSVREDCEQMTGRCVCKPGVKGSKCNECL-----DPNKKLGPNGC 136
C G++ E C TG+C CKPG G CN+C +PN+K P C
Sbjct: 1096 CDPIGALHEQCNSYTGQCQCKPGFGGRACNQCQAHYWGNPNEKCQPCEC 1144
Score = 189 (71.6 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 38/109 (34%), Positives = 59/109 (54%)
Query: 16 CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDA-CIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C D Q + GC C CN LG+ ++ C+ T +CKCK+ V G C++C P +G
Sbjct: 460 CKDGYWNLQSDNPEGC-EPCTCNPLGTLNNSGCVMRTGECKCKKYVTGKDCNQCMPETYG 518
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
LS+ +P+ GC C C GS C+ ++G+C C+P + G C++
Sbjct: 519 LSE----SPE--GCSLCNCDAGGSYDNYCDVISGQCRCRPHMTGRSCSQ 561
Score = 177 (67.4 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 40/114 (35%), Positives = 56/114 (49%)
Query: 35 CGCNKLGSTEDA-C--IEDTEQ------CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
C C+ GS++D C + + E+ C CK V G +C++C+ GYW L S P+
Sbjct: 418 CDCDPQGSSDDGICDSLNELEEGAVAGACHCKAFVTGRRCNQCKDGYWNLQ---SDNPE- 473
Query: 86 DGCLKCGCSQFGSVRED-CEQMTGRCVCKPGVKGSKCNECLDPNKKLG--PNGC 136
GC C C+ G++ C TG C CK V G CN+C+ L P GC
Sbjct: 474 -GCEPCTCNPLGTLNNSGCVMRTGECKCKKYVTGKDCNQCMPETYGLSESPEGC 526
Score = 173 (66.0 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 42/129 (32%), Positives = 59/129 (45%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P T GP+ GC + C CN +GS + C T QC+C G +C++C+PGYW
Sbjct: 822 CAPG--TYGFGPE--GCKA-CDCNSIGSKDKYCDLITGQCQCVPNTYGRECNQCQPGYWN 876
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNECLDP---NKK 130
P+ C C C+ + C+ + G C+ C+ G C+ CLD N
Sbjct: 877 F-------PE---CRVCQCNGHAAT---CDPIQGTCIDCQDSTTGYSCDSCLDGYYGNPL 923
Query: 131 LGPN-GCMP 138
G GC P
Sbjct: 924 FGSEIGCRP 932
Score = 161 (61.7 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 51/191 (26%), Positives = 74/191 (38%)
Query: 8 CLDSWYG--C--CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDA--CIEDTEQC-KCKQGV 60
C + + G C C DN PDN G S C C+ D C T C KC
Sbjct: 962 CQEGYSGSRCEICADN--FFGNPDNGGTCSKCECSNNVDLYDTGNCDRQTGACLKCLYQT 1019
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRE--DCEQMTGRCVCKPGVKG 118
G C+ C+ G++G + C +C C G+ C++ TG+C C P V+G
Sbjct: 1020 TGDHCELCKDGFFG-DALQQ------NCQQCECDFLGTNNTIAHCDRFTGQCPCLPNVQG 1072
Query: 119 SKCNECLDPNKKLGPN-GCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSDAYC 177
+C++C + + K+ GC P N TG + C G C +
Sbjct: 1073 VRCDQCAENHWKIASGEGC-ESCNCDPIGALHEQCNSYTG-QCQCKPGFGGRAC-NQCQA 1129
Query: 178 HITQNFARCCR 188
H N C+
Sbjct: 1130 HYWGNPNEKCQ 1140
Score = 136 (52.9 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 34/123 (27%), Positives = 51/123 (41%)
Query: 49 EDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTG 108
+D E+ CK + + + +P L I S DG C C+ GS+ + CE G
Sbjct: 749 KDYEKYNCKSSLYDMNY-KSDPKCQNLDNILSVFVH-DGASMCNCNPTGSLSKVCESNGG 806
Query: 109 RCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANR 168
C CKP V G +C++C GP GC + + +L TG + C
Sbjct: 807 YCQCKPNVVGRQCDQCAPGTYGFGPEGCK-ACDCNSIGSKDKYCDLITG-QCQCVPNTYG 864
Query: 169 EDC 171
+C
Sbjct: 865 REC 867
Score = 132 (51.5 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 39/134 (29%), Positives = 55/134 (41%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ----CKC 56
+G SCLD +YG + P CP T + D C DT C C
Sbjct: 907 TGYSCDSCLDGYYGNPLFGSEIGCRP--CRCPETVASGLAHA--DGCSLDTRNNNMLCHC 962
Query: 57 KQGVGGLKCDRCEPGYWGLSKISSYAPDIDG-CLKCGCSQFGSVRE--DCEQMTGRCV-C 112
++G G +C+ C ++G PD G C KC CS + + +C++ TG C+ C
Sbjct: 963 QEGYSGSRCEICADNFFG-------NPDNGGTCSKCECSNNVDLYDTGNCDRQTGACLKC 1015
Query: 113 KPGVKGSKCNECLD 126
G C C D
Sbjct: 1016 LYQTTGDHCELCKD 1029
>UNIPROTKB|Q9Y6N6 [details] [associations]
symbol:LAMC3 "Laminin subunit gamma-3" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0000904
"cell morphogenesis involved in differentiation" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0014002
"astrocyte development" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=TAS] [GO:0005198 "structural molecule activity"
evidence=TAS] [GO:0016020 "membrane" evidence=TAS] [GO:0005576
"extracellular region" evidence=TAS]
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0016020
GO:GO:0005198 GO:GO:0007601 GO:GO:0005578 GO:GO:0007155
PROSITE:PS00022 GO:GO:0060041 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 eggNOG:NOG235720 HOGENOM:HOG000019301
HOVERGEN:HBG100808 EMBL:AF041835 EMBL:AL583807 EMBL:AL355872
EMBL:AB208887 IPI:IPI00914899 RefSeq:NP_006050.3 UniGene:Hs.201805
ProteinModelPortal:Q9Y6N6 SMR:Q9Y6N6 IntAct:Q9Y6N6
MINT:MINT-7034525 STRING:Q9Y6N6 DMDM:308153586 PaxDb:Q9Y6N6
PRIDE:Q9Y6N6 DNASU:10319 Ensembl:ENST00000361069 GeneID:10319
KEGG:hsa:10319 UCSC:uc004caa.1 CTD:10319 GeneCards:GC09P133884
H-InvDB:HIX0008477 HGNC:HGNC:6494 MIM:604349 MIM:614115
neXtProt:NX_Q9Y6N6 Orphanet:280640 PharmGKB:PA30282 KO:K06247
OrthoDB:EOG498TZW ChiTaRS:LAMC3 GenomeRNAi:10319 NextBio:39119
ArrayExpress:Q9Y6N6 Bgee:Q9Y6N6 CleanEx:HS_LAMC3
Genevestigator:Q9Y6N6 GermOnline:ENSG00000050555 Uniprot:Q9Y6N6
Length = 1575
Score = 227 (85.0 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 44/97 (45%), Positives = 54/97 (55%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC S C C+ LGS ED C T QC C+ GV G CDRC+ G++G S I GC
Sbjct: 913 GCRS-CKCHPLGSQEDQCHPKTGQCTCRPGVTGQACDRCQLGFFGFS--------IKGCR 963
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
C CS G+ C + G CVC+PG +G KC+ C D
Sbjct: 964 ACRCSPLGAASAQCHE-NGTCVCRPGFEGYKCDRCHD 999
Score = 189 (71.6 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 43/117 (36%), Positives = 56/117 (47%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C GS C +DT C CK V G KCDRC PG+ LS+ GC C C+
Sbjct: 383 CDCQSAGSLHLQC-DDTGTCACKPTVTGWKCDRCLPGFHSLSE--------GGCRPCTCN 433
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC------LDPNKKLGPNGCMPGMEVKPC 145
GS+ + C+ +GRC CK V+G+ C+ C L P+ G + C K C
Sbjct: 434 PAGSL-DTCDPRSGRCPCKENVEGNLCDRCRPGTFNLQPHNPAGCSSCFCYGHSKVC 489
Score = 184 (69.8 bits), Expect = 9.3e-13, P = 9.3e-13
Identities = 42/126 (33%), Positives = 56/126 (44%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDA--CIEDTEQCKCKQ 58
+G + + C + +YG LA P + P C C+ GS + C T QC C
Sbjct: 839 TGDHCEHCQEGFYG-----SALAPRPADKCMP--CSCHPQGSVSEQMPCDPVTGQCSCLP 891
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
V C RC PG++ L P GC C C GS + C TG+C C+PGV G
Sbjct: 892 HVTARDCSRCYPGFFDLQ------PG-RGCRSCKCHPLGSQEDQCHPKTGQCTCRPGVTG 944
Query: 119 SKCNEC 124
C+ C
Sbjct: 945 QACDRC 950
Score = 151 (58.2 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 42/152 (27%), Positives = 64/152 (42%)
Query: 30 GCPSTCG-CNKLGSTEDACIEDTE----QC-KCKQGVGGLKCDRCEPGYWGLSKISSYAP 83
G P C C G+ + + + + C +C G C+ C+ G++G S+ AP
Sbjct: 802 GHPQPCHQCQCSGNVDPNAVGNCDPLSGHCLRCLHNTTGDHCEHCQEGFYG----SALAP 857
Query: 84 -DIDGCLKCGCSQFGSVRED--CEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN-GCMPG 139
D C+ C C GSV E C+ +TG+C C P V C+ C L P GC
Sbjct: 858 RPADKCMPCSCHPQGSVSEQMPCDPVTGQCSCLPHVTARDCSRCYPGFFDLQPGRGCR-S 916
Query: 140 MEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
+ P + + +TG + C G + C
Sbjct: 917 CKCHPLGSQEDQCHPKTG-QCTCRPGVTGQAC 947
Score = 143 (55.4 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 41/136 (30%), Positives = 57/136 (41%)
Query: 15 CCP--DNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE---------QCK-CKQGVGG 62
C P ++ A+G A CN G +E+ C D E +C C+ G
Sbjct: 304 CLPFFQDRPWARGTAEAA-HECLPCNCSGRSEE-CTFDRELFRSTGHGGRCHHCRDHTAG 361
Query: 63 LKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN 122
C+RC+ ++ + P + C C C GS+ C+ TG C CKP V G KC+
Sbjct: 362 PHCERCQENFY------HWDPRMP-CQPCDCQSAGSLHLQCDD-TGTCACKPTVTGWKCD 413
Query: 123 ECLDPNKKLGPNGCMP 138
CL L GC P
Sbjct: 414 RCLPGFHSLSEGGCRP 429
Score = 140 (54.3 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 36/114 (31%), Positives = 48/114 (42%)
Query: 15 CCPDNKT-LAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C P K + QG A C C CN+ G+ C +T C C G C+RC PG++
Sbjct: 687 CAPGYKREMPQGGPYASCVP-CTCNQHGT----CDPNTGICVCSHHTEGPSCERCLPGFY 741
Query: 74 GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNECLD 126
G + +A D C C C + E C C PG +G +C C D
Sbjct: 742 G----NPFAGQADDCQPCPCPGQSACTTIPESREVVCTHCPPGQRGRRCEVCDD 791
Score = 131 (51.2 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 35/113 (30%), Positives = 47/113 (41%)
Query: 52 EQCKCKQGVGGLKCDRCEPGYWG-LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRC 110
E C C G G C+ C PGY + + YA C+ C C+Q G+ C+ TG C
Sbjct: 671 EICSCPTGYTGQFCESCAPGYKREMPQGGPYA----SCVPCTCNQHGT----CDPNTGIC 722
Query: 111 VCKPGVKGSKCNECLDPNKKLGP-NGCMPGMEVKPCNGEPPVINLQTGVELDC 162
VC +G C CL P P G + PC G+ + E+ C
Sbjct: 723 VCSHHTEGPSCERCL-PGFYGNPFAGQADDCQPCPCPGQSACTTIPESREVVC 774
Score = 122 (48.0 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 30/79 (37%), Positives = 38/79 (48%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P +L++G GC C CN GS D C + +C CK+ V G CDRC PG +
Sbjct: 415 CLPGFHSLSEG----GC-RPCTCNPAGSL-DTCDPRSGRCPCKENVEGNLCDRCRPGTFN 468
Query: 75 LSKISSYAPDIDGCLKCGC 93
L + P GC C C
Sbjct: 469 LQP---HNPA--GCSSCFC 482
>UNIPROTKB|Q13751 [details] [associations]
symbol:LAMB3 "Laminin subunit beta-3" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] [GO:0050873 "brown fat cell
differentiation" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=NAS] [GO:0008544 "epidermis development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0031581
"hemidesmosome assembly" evidence=TAS] [GO:0034329 "cell junction
assembly" evidence=TAS] Reactome:REACT_118779
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0005576 EMBL:CH471100 GO:GO:0005198
GO:GO:0050873 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Reactome:REACT_111155 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0008544
GO:GO:0031581 MIM:226650 Orphanet:79402 EMBL:AL031316
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
EMBL:AL023754 MIM:226700 Orphanet:79404 GO:GO:0005610 EMBL:L25541
EMBL:U17760 EMBL:U17745 EMBL:U17746 EMBL:U17747 EMBL:U17748
EMBL:U17749 EMBL:U17750 EMBL:U17751 EMBL:U17752 EMBL:U17753
EMBL:U17754 EMBL:U17755 EMBL:U17756 EMBL:U17757 EMBL:U17758
EMBL:U17759 EMBL:D37766 EMBL:AY035783 EMBL:BC075838 IPI:IPI00299404
PIR:A53612 RefSeq:NP_000219.2 RefSeq:NP_001017402.1
RefSeq:NP_001121113.1 UniGene:Hs.497636 ProteinModelPortal:Q13751
SMR:Q13751 MINT:MINT-4053402 STRING:Q13751 PhosphoSite:Q13751
DMDM:2497600 PaxDb:Q13751 PRIDE:Q13751 DNASU:3914
Ensembl:ENST00000356082 Ensembl:ENST00000367030
Ensembl:ENST00000391911 Ensembl:ENST00000455193 GeneID:3914
KEGG:hsa:3914 UCSC:uc001hhg.3 CTD:3914 GeneCards:GC01M209788
HGNC:HGNC:6490 HPA:HPA008069 MIM:150310 neXtProt:NX_Q13751
PharmGKB:PA30278 eggNOG:NOG289025 HOGENOM:HOG000113279
HOVERGEN:HBG052302 InParanoid:Q13751 KO:K06244 OMA:RSQMEED
OrthoDB:EOG4JDH5Z PhylomeDB:Q13751 ChiTaRS:LAMB3 GenomeRNAi:3914
NextBio:15375 PMAP-CutDB:Q13751 ArrayExpress:Q13751 Bgee:Q13751
CleanEx:HS_LAMB3 Genevestigator:Q13751 GermOnline:ENSG00000196878
Uniprot:Q13751
Length = 1172
Score = 225 (84.3 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 59/164 (35%), Positives = 81/164 (49%)
Query: 34 TCGCNKLGSTEDA-CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
+C C+ G+ A C T QC CK+ V G +CD C+PG+ GL+ YA + GC +C
Sbjct: 378 SCECDPDGAVPGAPCDPVTGQCVCKEHVQGERCDLCKPGFTGLT----YA-NPQGCHRCD 432
Query: 93 CSQFGSVRE-DCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN-GCMPGMEVKPCNGEPP 150
C+ GS R+ C++ +GRC+C P V G KC++C + KL GC P P N P
Sbjct: 433 CNILGSRRDMPCDEESGRCLCLPNVVGPKCDQCAPYHWKLASGQGCEP-CACDPHNSLSP 491
Query: 151 VINLQTGV----E----LDCGSGANREDCPSDAYCHITQNFARC 186
N TG E L C + A R+ CP Y + C
Sbjct: 492 QCNQFTGQCPCREGFGGLMCSAAAIRQ-CPDRTYGDVATGCRAC 534
Score = 178 (67.7 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 36/110 (32%), Positives = 52/110 (47%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P + LA G GC C C+ S C + T QC C++G GGL C
Sbjct: 465 CAPYHWKLASGQ---GC-EPCACDPHNSLSPQCNQFTGQCPCREGFGGLMCSAAAIRQ-- 518
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
+Y GC C C G+ C++ +GRC+C+PG+ G +C++C
Sbjct: 519 -CPDRTYGDVATGCRACDCDFRGTEGPGCDKASGRCLCRPGLTGPRCDQC 567
Score = 128 (50.1 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 37/127 (29%), Positives = 54/127 (42%)
Query: 23 AQGPDNAGCPSTCGCNKLGST--EDACIEDTEQ------C-KCKQGVGGLKCDRCEPGYW 73
A+G D C C CN T D + Q C C+ G C+RC+ Y+
Sbjct: 305 AEGQDAHEC-QRCDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYF 363
Query: 74 GLSKISSYAPDIDGCLKCGCSQFGSVR-EDCEQMTGRCVCKPGVKGSKCNECLDPNKKL- 131
+ + + C+ C C G+V C+ +TG+CVCK V+G +C+ C L
Sbjct: 364 RNRRPGASIQET--CISCECDPDGAVPGAPCDPVTGQCVCKEHVQGERCDLCKPGFTGLT 421
Query: 132 --GPNGC 136
P GC
Sbjct: 422 YANPQGC 428
>UNIPROTKB|P55268 [details] [associations]
symbol:LAMB2 "Laminin subunit beta-2" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005178
"integrin binding" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0014044
"Schwann cell development" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0048677 "axon extension involved in regeneration"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0072249 "metanephric glomerular visceral
epithelial cell development" evidence=IEA] [GO:0072274 "metanephric
glomerular basement membrane development" evidence=IEA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0005608 "laminin-3 complex"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=NAS] [GO:0005605 "basal lamina" evidence=TAS] [GO:0005576
"extracellular region" evidence=TAS] [GO:0031012 "extracellular
matrix" evidence=ISS;IDA] [GO:0043260 "laminin-11 complex"
evidence=TAS] Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
GO:GO:0007411 GO:GO:0005198 GO:GO:0007528 GO:GO:0007601
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0060041
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0014044
GO:GO:0014002 Orphanet:98915 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0005608 GO:GO:0043260
eggNOG:NOG241384 HOGENOM:HOG000007552 InterPro:IPR013015
PROSITE:PS51116 HOVERGEN:HBG052301 EMBL:Z68155 EMBL:Z68156
EMBL:X79683 EMBL:S77512 IPI:IPI00296922 PIR:A55677 PIR:S53869
RefSeq:NP_002283.3 UniGene:Hs.439726 ProteinModelPortal:P55268
SMR:P55268 DIP:DIP-42106N IntAct:P55268 MINT:MINT-1197111
STRING:P55268 PhosphoSite:P55268 DMDM:156630892 PaxDb:P55268
PRIDE:P55268 DNASU:3913 Ensembl:ENST00000305544
Ensembl:ENST00000418109 GeneID:3913 KEGG:hsa:3913 UCSC:uc003cwe.3
CTD:3913 GeneCards:GC03M049133 HGNC:HGNC:6487 HPA:CAB000053
HPA:HPA001895 MIM:150325 MIM:609049 MIM:614199 neXtProt:NX_P55268
Orphanet:2670 PharmGKB:PA164741827 InParanoid:P55268 KO:K06243
OMA:QPYCIVS OrthoDB:EOG4KSPHW PhylomeDB:P55268 ChiTaRS:LAMB2
GenomeRNAi:3913 NextBio:15371 ArrayExpress:P55268 Bgee:P55268
CleanEx:HS_LAMB2 Genevestigator:P55268 GermOnline:ENSG00000172037
GO:GO:0048677 GO:GO:0072274 GO:GO:0072249 Uniprot:P55268
Length = 1798
Score = 227 (85.0 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 54/157 (34%), Positives = 70/157 (44%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P +L+ N P C CN GS C QC CK GV G +CD C PGY+G
Sbjct: 765 CAPLLISLSTLIYNGALP--CQCNPQGSLSSECNPHGGQCLCKPGVVGRRCDLCAPGYYG 822
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN 134
+ P GC C CS G++ CE+ +G+C+C+ G G +C+ C + G
Sbjct: 823 ------FGPT--GCQACQCSHEGALSSLCEKTSGQCLCRTGAFGLRCDRC--QRGQWGFP 872
Query: 135 GCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
C P + CNG N TG L C E C
Sbjct: 873 SCRPCV----CNGHADECNTHTGACLGCRDHTGGEHC 905
Score = 182 (69.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 36/99 (36%), Positives = 52/99 (52%)
Query: 27 DNAGCPSTCGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
D GC C CN G+ + C ++ C CK+ V G CDRC PG+WGLS D
Sbjct: 463 DRLGC-RRCQCNARGTVPGSTPCDPNSGSCYCKRLVTGRGCDRCLPGHWGLSH------D 515
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
+ GC C C G++ C++ TG+C C+ + G +C +
Sbjct: 516 LLGCRPCDCDVGGALDPQCDEGTGQCHCRQHMVGRRCEQ 554
Score = 182 (69.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 40/124 (32%), Positives = 53/124 (42%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P+ L G GC C C+ + C E T QC C+ G GG C C+ +WG
Sbjct: 1079 CAPNFWNLTSGH---GC-QPCACHPSRARGPTCNEFTGQCHCRAGFGGRTCSECQELHWG 1134
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN 134
P + C C C G C + TG C C+PGV G +C++C + P
Sbjct: 1135 -------DPGLQ-CHACDCDSRGIDTPQCHRFTGHCSCRPGVSGVRCDQCARGFSGIFP- 1185
Query: 135 GCMP 138
C P
Sbjct: 1186 ACHP 1189
Score = 163 (62.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 44/125 (35%), Positives = 62/125 (49%)
Query: 27 DNAGCPSTCGCNKLGSTEDA-CIEDTE--------QCKCKQGVGGLKCDRCEPGYWGLSK 77
D A C S C C+ +GS + C + QC+CK+ V G +C +C G++GLS
Sbjct: 403 DPAVCRS-CDCDPMGSQDGGRCDSHDDPALGLVSGQCRCKEHVVGTRCQQCRDGFFGLS- 460
Query: 78 ISSYAPDIDGCLKCGCSQFGSV--REDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN- 134
IS D GC +C C+ G+V C+ +G C CK V G C+ CL + L +
Sbjct: 461 IS----DRLGCRRCQCNARGTVPGSTPCDPNSGSCYCKRLVTGRGCDRCLPGHWGLSHDL 516
Query: 135 -GCMP 138
GC P
Sbjct: 517 LGCRP 521
Score = 157 (60.3 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 35/98 (35%), Positives = 45/98 (45%)
Query: 35 CGCNKLGS------TEDACIEDTE--QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
C CN LG+ + D C D QC C V G CDRC P +W L+ S +
Sbjct: 1038 CTCNLLGTNPQQCPSPDQCHCDPSSGQCPCLPNVQGPSCDRCAPNFWNLT--SGH----- 1090
Query: 87 GCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
GC C C + C + TG+C C+ G G C+EC
Sbjct: 1091 GCQPCACHPSRARGPTCNEFTGQCHCRAGFGGRTCSEC 1128
Score = 144 (55.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 48/169 (28%), Positives = 67/169 (39%)
Query: 23 AQGPDNAGCPSTCG-----CNKLGSTE----DACIEDTEQC-KCKQGVGGLKCDRCEPGY 72
A P + G PS G C G+ + DAC T QC +C G C C+PG+
Sbjct: 967 ACAPGHFGDPSRPGGRCQLCECSGNIDPMDPDACDPHTGQCLRCLHHTEGPHCAHCKPGF 1026
Query: 73 WGLSKISSYAPDIDGCLKCGCSQFGSVREDC--------EQMTGRCVCKPGVKGSKCNEC 124
G + S C +C C+ G+ + C + +G+C C P V+G C+ C
Sbjct: 1027 HGQAARQS-------CHRCTCNLLGTNPQQCPSPDQCHCDPSSGQCPCLPNVQGPSCDRC 1079
Query: 125 LDPN--KKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
PN +GC P P P N TG + C +G C
Sbjct: 1080 A-PNFWNLTSGHGCQP-CACHPSRARGPTCNEFTG-QCHCRAGFGGRTC 1125
Score = 106 (42.4 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C P + L+ D GC C C+ G+ + C E T QC C+Q + G +C++ +PGY+
Sbjct: 505 CLPGHWGLSH--DLLGC-RPCDCDVGGALDPQCDEGTGQCHCRQHMVGRRCEQVQPGYF 560
Score = 61 (26.5 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 35/130 (26%), Positives = 49/130 (37%)
Query: 68 CEPGYWGLSKISSYAPDIDG--------CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGS 119
C GY GL + + AP G C C CS G++ + M C P
Sbjct: 956 CRAGYTGL-RCEACAPGHFGDPSRPGGRCQLCECS--GNI----DPMDPDA-CDPHT--G 1005
Query: 120 KCNECLDPNKKLGPN--GCMPGMEVKPCNGEPPVINLQTGVELDCGS-GANREDCPSDAY 176
+C CL + GP+ C PG +G+ Q+ C G N + CPS
Sbjct: 1006 QCLRCLHHTE--GPHCAHCKPGF-----HGQAA---RQSCHRCTCNLLGTNPQQCPSPDQ 1055
Query: 177 CHITQNFARC 186
CH + +C
Sbjct: 1056 CHCDPSSGQC 1065
>UNIPROTKB|F1MMK1 [details] [associations]
symbol:LAMB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050873 "brown fat cell differentiation" evidence=IEA]
[GO:0005610 "laminin-5 complex" evidence=IEA] GO:GO:0050873
InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005610
GeneTree:ENSGT00620000087753 OMA:RSQMEED EMBL:DAAA02043815
EMBL:DAAA02043816 IPI:IPI00712889 UniGene:Bt.16740
Ensembl:ENSBTAT00000022005 Uniprot:F1MMK1
Length = 1172
Score = 223 (83.6 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 56/144 (38%), Positives = 74/144 (51%)
Query: 35 CGCNKLGSTEDA-CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C C+ G+ A C T QC CK+ V G +CD C+PG+ GL+ S+ P GC +C C
Sbjct: 379 CECDPDGAVPGAPCDPLTGQCVCKEHVQGERCDLCKPGFTGLT-FSN--PQ--GCHRCDC 433
Query: 94 SQFGSVRE-DCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN-GCMPGMEVKPCNGEPPV 151
S G+ R+ C++ TGRCVC P V G KC++C + KL GC P P N P
Sbjct: 434 SVLGARRDVPCDEETGRCVCLPHVVGPKCDQCAPHHWKLASGRGCEP-CACDPHNSLGPQ 492
Query: 152 INLQTGVELDCGSGANREDCPSDA 175
N TG + C G C + A
Sbjct: 493 CNQFTG-QCACREGFGGLTCRAAA 515
Score = 176 (67.0 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 36/110 (32%), Positives = 52/110 (47%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P + LA G GC C C+ S C + T QC C++G GGL C
Sbjct: 465 CAPHHWKLASG---RGC-EPCACDPHNSLGPQCNQFTGQCACREGFGGLTCRAAAIRQ-- 518
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
+Y GC C C G+ C++ +GRC+C+PG+ G +C++C
Sbjct: 519 -CPDRTYGDAAAGCRACDCDFRGTEGPGCDKASGRCLCRPGLTGPRCDQC 567
Score = 128 (50.1 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 38/127 (29%), Positives = 54/127 (42%)
Query: 23 AQGPDNAGCPSTCGCNKLGST--EDACIEDTEQ------C-KCKQGVGGLKCDRCEPGYW 73
A+ D C C CN T D + Q C C+ G C+RC+ Y+
Sbjct: 305 AEDQDPHEC-QRCDCNGHSETCHFDPAVFAASQGAHGGVCDNCRDHTEGRNCERCQLHYF 363
Query: 74 GLSKISSYAPDIDGCLKCGCSQFGSVR-EDCEQMTGRCVCKPGVKGSKCNECLDPNKKL- 131
+ AP + C+ C C G+V C+ +TG+CVCK V+G +C+ C L
Sbjct: 364 RNRRPG--APIQETCIPCECDPDGAVPGAPCDPLTGQCVCKEHVQGERCDLCKPGFTGLT 421
Query: 132 --GPNGC 136
P GC
Sbjct: 422 FSNPQGC 428
>UNIPROTKB|F1NI05 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0022617
"extracellular matrix disassembly" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] GO:GO:0016477 GO:GO:0006461 GO:GO:0007155
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
PROSITE:PS51115 PROSITE:PS51117 GeneTree:ENSGT00690000102103
GO:GO:0043259 EMBL:AADN02034183 EMBL:AADN02034182 IPI:IPI00822825
Ensembl:ENSGALT00000039414 ArrayExpress:F1NI05 Uniprot:F1NI05
Length = 1007
Score = 222 (83.2 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 55/143 (38%), Positives = 67/143 (46%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVG 61
G + + C DS+Y G + GC C CN +GS C + QC CK GV
Sbjct: 131 GAHCERCRDSFYRL---------GSEE-GC-LPCSCNPVGSLSTQC-DSYGQCSCKPGVM 178
Query: 62 GLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
G KCDRC+PG+ LS+ GC C C+ GS E C TGRC CK V+G C
Sbjct: 179 GEKCDRCQPGFHSLSEA--------GCRPCSCNPAGSTGE-CNMETGRCTCKDNVEGFHC 229
Query: 122 NEC------LDPNKKLGPNGCMP 138
C LDP+ P GC P
Sbjct: 230 ERCKPGFFHLDPSN---PRGCTP 249
Score = 220 (82.5 bits), Expect = 7.6e-17, P = 7.6e-17
Identities = 50/151 (33%), Positives = 71/151 (47%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGST--EDACIEDTEQCKCKQ 58
+G Y C D ++G LA P + C + C CN G+ + +C + T QC+C
Sbjct: 612 AGFYCDRCKDGFFG-----NPLATNPADK-CRA-CHCNPYGTVNQQTSCNQVTGQCECLS 664
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
V C CEPG++ L GC +C C GS C+ TG+C C+PGV G
Sbjct: 665 HVTERDCSACEPGFFNLQSGR-------GCERCDCHALGSTNGQCDIWTGQCECQPGVTG 717
Query: 119 SKCNECLDPNKKLGPNGCMPGMEVKPCNGEP 149
+C+ C + GP GC KPC+ +P
Sbjct: 718 QRCDRCEANHFGFGPEGC------KPCDCDP 742
Score = 199 (75.1 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 40/95 (42%), Positives = 52/95 (54%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC C C+ LGST C T QC+C+ GV G +CDRCE ++G + P+ GC
Sbjct: 686 GC-ERCDCHALGSTNGQCDIWTGQCECQPGVTGQRCDRCEANHFG------FGPE--GCK 736
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C C GS C + GRC CK G GS+C++C
Sbjct: 737 PCDCDPEGSRALQCRE-DGRCECKEGFVGSRCDQC 770
Score = 148 (57.2 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 49/173 (28%), Positives = 77/173 (44%)
Query: 8 CLDSWYGCCPDNKTLAQGPDN-AGCPSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKC 65
C D+++G P + A P C N +G+ C T +C KC G C
Sbjct: 562 CDDAYFGD-PLGENGAVRPCRLCQCNDNIDPNAVGN----CNRQTGECLKCIYNTAGFYC 616
Query: 66 DRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED--CEQMTGRCVCKPGVKGSKCNE 123
DRC+ G++G ++ A D C C C+ +G+V + C Q+TG+C C V C+
Sbjct: 617 DRCKDGFFGNPLATNPA---DKCRACHCNPYGTVNQQTSCNQVTGQCECLSHVTERDCSA 673
Query: 124 CLDP---NKKLGPNGC--MPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
C +P N + G GC + NG+ ++ TG + +C G + C
Sbjct: 674 C-EPGFFNLQSG-RGCERCDCHALGSTNGQ---CDIWTG-QCECQPGVTGQRC 720
Score = 142 (55.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 48/158 (30%), Positives = 64/158 (40%)
Query: 15 CCPD--NKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGY 72
C P +T GP + P C CN G +E C +T C C+ G C++C GY
Sbjct: 459 CSPGYRRETPGLGPYSPCVP--CTCN--GHSE-TCDPETGMCDCRDNTAGSHCEKCSDGY 513
Query: 73 WGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNECLDP--NK 129
+G + A D C G S V E + C C+ G G +C C D
Sbjct: 514 YG-DATAGTALDCQPCPCPGGSSCAVVPRTKEVV---CTSCQTGTTGKRCELCDDAYFGD 569
Query: 130 KLGPNGCMPGMEVKPCNG--EPPVI---NLQTGVELDC 162
LG NG + + CN +P + N QTG L C
Sbjct: 570 PLGENGAVRPCRLCQCNDNIDPNAVGNCNRQTGECLKC 607
Score = 139 (54.0 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 44/146 (30%), Positives = 59/146 (40%)
Query: 52 EQCKCKQGVGGLKCDRCEPGYWGLSK-ISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRC 110
E C C G G C+RC PGY + + Y+P C+ C C+ E C+ TG C
Sbjct: 443 ESCSCPAGYEGQFCERCSPGYRRETPGLGPYSP----CVPCTCNGHS---ETCDPETGMC 495
Query: 111 VCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGS---GAN 167
C+ GS C +C D G + PC G + E+ C S G
Sbjct: 496 DCRDNTAGSHCEKCSDGYYGDATAGTALDCQPCPCPGGSSCAVVPRTKEVVCTSCQTGTT 555
Query: 168 REDCP--SDAYCH--ITQNFA-RCCR 188
+ C DAY + +N A R CR
Sbjct: 556 GKRCELCDDAYFGDPLGENGAVRPCR 581
Score = 124 (48.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 45/193 (23%), Positives = 73/193 (37%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
+G + + C D +YG L P CP C + T++ C+ G
Sbjct: 502 AGSHCEKCSDGYYGDATAGTALDCQP--CPCPGGSSCAVVPRTKEVVCTS-----CQTGT 554
Query: 61 GGLKCDRCEPGYWG--LSKISSYAPDIDGCLKCGCSQF--GSVREDCEQMTGRCV-CKPG 115
G +C+ C+ Y+G L + + P C C C+ + +C + TG C+ C
Sbjct: 555 TGKRCELCDDAYFGDPLGENGAVRP----CRLCQCNDNIDPNAVGNCNRQTGECLKCIYN 610
Query: 116 VKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEP-PVINLQTGVELDCGSGANREDCPSD 174
G C+ C D P P + + C+ P +N QT C + +C S
Sbjct: 611 TAGFYCDRCKDGFFG-NPLATNPADKCRACHCNPYGTVNQQTS----CNQVTGQCECLS- 664
Query: 175 AYCHITQNFARCC 187
H+T+ C
Sbjct: 665 ---HVTERDCSAC 674
>MGI|MGI:1344394 [details] [associations]
symbol:Lamc3 "laminin gamma 3" species:10090 "Mus musculus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=IGI] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005604 "basement membrane" evidence=IDA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007601 "visual perception"
evidence=IGI] [GO:0014002 "astrocyte development" evidence=IGI]
[GO:0060041 "retina development in camera-type eye" evidence=IGI]
MGI:MGI:1344394 GO:GO:0007601 GO:GO:0007155 PROSITE:PS00022
GO:GO:0060041 PROSITE:PS01186 EMBL:CH466542 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
GeneTree:ENSGT00690000102103 HOGENOM:HOG000019301
HOVERGEN:HBG100808 CTD:10319 KO:K06247 OrthoDB:EOG498TZW
EMBL:AF083372 EMBL:AL928893 EMBL:BX511243 EMBL:BC096366
EMBL:AF079520 IPI:IPI00756854 RefSeq:NP_035966.2 UniGene:Mm.302362
ProteinModelPortal:Q9R0B6 SMR:Q9R0B6 STRING:Q9R0B6 PaxDb:Q9R0B6
PRIDE:Q9R0B6 Ensembl:ENSMUST00000028187 GeneID:23928 KEGG:mmu:23928
OMA:QRGRRCE NextBio:303725 Bgee:Q9R0B6 CleanEx:MM_LAMC3
Genevestigator:Q9R0B6 GermOnline:ENSMUSG00000026840 Uniprot:Q9R0B6
Length = 1581
Score = 223 (83.6 bits), Expect = 6.6e-17, P = 6.6e-17
Identities = 51/124 (41%), Positives = 61/124 (49%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P L G GC S C C+ LGS E+ C T QC C+ GV G CDRC+ G++G
Sbjct: 912 CSPGFYDLQSG---RGCQS-CKCHPLGSLENKCHPKTGQCPCRPGVTGQACDRCQLGFFG 967
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKL--G 132
S I GC C CS G+ C + CVC+PG G KC+ C D N L G
Sbjct: 968 FS--------IKGCRDCRCSPLGAASSQCHE-NSTCVCRPGFVGYKCDRCQD-NFFLADG 1017
Query: 133 PNGC 136
GC
Sbjct: 1018 DTGC 1021
Score = 192 (72.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 42/125 (33%), Positives = 57/125 (45%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGS-TEDACIEDTEQCKCKQG 59
+G + + C + +YG +A P + P C C+ GS +E C T QC C
Sbjct: 851 TGAHCEHCREGFYG-----SAVATRPVDKCAP--CSCDLRGSVSEKTCNPVTGQCVCLPY 903
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGS 119
V G C RC PG++ L GC C C GS+ C TG+C C+PGV G
Sbjct: 904 VSGRDCSRCSPGFYDLQSGR-------GCQSCKCHPLGSLENKCHPKTGQCPCRPGVTGQ 956
Query: 120 KCNEC 124
C+ C
Sbjct: 957 ACDRC 961
Score = 179 (68.1 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 48/153 (31%), Positives = 67/153 (43%)
Query: 2 GIYLKSCLDSWYG--CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQG 59
G + + C D G C K + C C C+ GS C +++ C CK
Sbjct: 358 GGHCQRCRDHTTGPHCERCEKNYYRWSPKTPC-QPCDCHPAGSLSLQC-DNSGVCPCKPT 415
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGS 119
V G KCDRC PG+ LS+ GC C C+ GS+ C+ +G C CK V+GS
Sbjct: 416 VTGWKCDRCLPGFHSLSE--------GGCRPCACNVAGSLGT-CDPRSGNCPCKENVEGS 466
Query: 120 KCNEC------LDPNKKLGPNGCMPGMEVKPCN 146
C+ C L P+ +G + C K C+
Sbjct: 467 LCDRCRPGTFNLQPHNPVGCSSCFCYGHSKVCS 499
Score = 141 (54.7 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 38/112 (33%), Positives = 49/112 (43%)
Query: 37 CNKLGSTEDACIEDTE---------QC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
CN G +E+ C D E C +C+ G C+RCE Y+ + S P
Sbjct: 336 CNCSGHSEE-CTFDRELYRSTGHGGHCQRCRDHTTGPHCERCEKNYY---RWSPKTP--- 388
Query: 87 GCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP 138
C C C GS+ C+ +G C CKP V G KC+ CL L GC P
Sbjct: 389 -CQPCDCHPAGSLSLQCDN-SGVCPCKPTVTGWKCDRCLPGFHSLSEGGCRP 438
Score = 128 (50.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 38/131 (29%), Positives = 55/131 (41%)
Query: 20 KTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKIS 79
+ + G A C C CN+ G+ C +T C C G C+RC PG++G + S
Sbjct: 705 REIPHGGPYANC-IPCTCNQHGT----CDPNTGICLCGHHTEGPSCERCMPGFYG-NAFS 758
Query: 80 SYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNECLDP--NKKLGPNGC 136
A D C G S ++ E + + C C PG +G +C C D LG +G
Sbjct: 759 GRADDCQPCPCPGQSACATIPESGDVV---CTHCPPGQRGRRCESCEDGFFGDPLGLSGA 815
Query: 137 MPGMEVKPCNG 147
C+G
Sbjct: 816 PQPCRRCQCSG 826
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 41/160 (25%), Positives = 61/160 (38%)
Query: 21 TLAQGPDNAGCPSTCGCNKLGSTEDACIED----TEQCKCKQGVGGLKCDRCEPGYWGLS 76
T QGP ++G C + + E C C QG G C+ C GY
Sbjct: 648 TSGQGPGHSGQVLLCEVQLTSAWPQRELAPPASWVETCLCPQGYTGQFCEFCALGY--KR 705
Query: 77 KISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGC 136
+I P + C+ C C+Q G+ C+ TG C+C +G C C+ +G
Sbjct: 706 EIPHGGPYAN-CIPCTCNQHGT----CDPNTGICLCGHHTEGPSCERCMPGFYGNAFSGR 760
Query: 137 MPGMEVKPCNGEPPVINL-QTG--VELDCGSGANREDCPS 173
+ PC G+ + ++G V C G C S
Sbjct: 761 ADDCQPCPCPGQSACATIPESGDVVCTHCPPGQRGRRCES 800
>UNIPROTKB|F1S663 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0022617 "extracellular
matrix disassembly" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] GO:GO:0016477 GO:GO:0006461 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446 GO:GO:0031175
GO:GO:0031581 GO:GO:0022617 GO:GO:0005201 GO:GO:0043208
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GeneTree:ENSGT00690000102103
GO:GO:0043259 OMA:EATDYPW EMBL:CU914232 Ensembl:ENSSSCT00000016945
Uniprot:F1S663
Length = 1606
Score = 222 (83.2 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 58/183 (31%), Positives = 82/183 (44%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGST--EDACIEDTEQCKCKQ 58
+G Y C D ++G LA P + C + C CN G+ + +C T QC+C
Sbjct: 856 AGFYCDRCKDGFFG-----NPLAPNPADK-CKA-CDCNPYGTVKQQSSCNPVTGQCECLP 908
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
V G C C+PG++ L S GC +C C GS C+ TG+C C+PG+ G
Sbjct: 909 HVTGRDCGACDPGFYNLQ--SG-----QGCKRCECHALGSTNGQCDVHTGQCECQPGITG 961
Query: 119 SKCNECLDPNKKLGPNGCMPGMEVKPCNGEPP-VINLQTGVE--LDCGSG--ANREDCPS 173
C C + GP GC KPC+ P ++LQ + +C G NR D
Sbjct: 962 QHCERCEVNHFGFGPEGC------KPCDCHPEGALSLQCKDDGRCECREGFVGNRCDQCE 1015
Query: 174 DAY 176
+ Y
Sbjct: 1016 ENY 1018
Score = 212 (79.7 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 54/145 (37%), Positives = 70/145 (48%)
Query: 2 GIYLKSCLDSWYG--C--CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCK 57
G + +C D+ G C C +N G A C S C C+ +GS C + +C CK
Sbjct: 363 GGHCTNCQDNTDGPNCERCRENY-FRLGNREA-C-SPCHCSPVGSLSTQC-DSYGRCSCK 418
Query: 58 QGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVK 117
GV G KCDRC+PGY L++ GC C C+ GS ++C TGRCVCK V+
Sbjct: 419 PGVMGDKCDRCQPGYHSLTEA--------GCRPCSCNPSGST-DECNVETGRCVCKDNVE 469
Query: 118 GSKCNECLDPN----KKLGPNGCMP 138
G C C P + P GC P
Sbjct: 470 GFNCERC-KPGFFNLESSNPRGCTP 493
Score = 163 (62.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 45/146 (30%), Positives = 65/146 (44%)
Query: 35 CGCNKL--GSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPD-IDGCLK 90
C CN + C T +C KC G CDRC+ G++G + AP+ D C
Sbjct: 827 CQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFG----NPLAPNPADKCKA 882
Query: 91 CGCSQFGSVRED--CEQMTGRCVCKPGVKGSKCNECLDP---NKKLGPNGCMPGMEVKPC 145
C C+ +G+V++ C +TG+C C P V G C C DP N + G GC E
Sbjct: 883 CDCNPYGTVKQQSSCNPVTGQCECLPHVTGRDCGAC-DPGFYNLQSG-QGCKR-CECHAL 939
Query: 146 NGEPPVINLQTGVELDCGSGANREDC 171
++ TG + +C G + C
Sbjct: 940 GSTNGQCDVHTG-QCECQPGITGQHC 964
Score = 133 (51.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 42/157 (26%), Positives = 67/157 (42%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ--C-KCK 57
+G + + C D +YG + T+ D CP C G + A + T++ C C
Sbjct: 746 AGPHCEKCSDGYYG----DSTVGTSSDCQPCP--CP----GGSSCAVVPKTQEVVCTNCP 795
Query: 58 QGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQF--GSVREDCEQMTGRCV-CKP 114
G G +C+ C+ GY+G + P + C C C+ + +C ++TG C+ C
Sbjct: 796 TGTTGKRCELCDDGYFG-DPLGRNGP-VRLCRLCQCNDNIDPNAVGNCNRLTGECLKCIY 853
Query: 115 GVKGSKCNECLDP--NKKLGPNGCMPGMEVKPCNGEP 149
G C+ C D L PN P + K C+ P
Sbjct: 854 NTAGFYCDRCKDGFFGNPLAPN---PADKCKACDCNP 887
Score = 125 (49.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 48/169 (28%), Positives = 70/169 (41%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVG 61
G + + CL + +T + GP + C C CN G +E C +T C C+
Sbjct: 697 GQFCEMCLSGYR-----RETPSLGPYSP-CV-LCTCN--GHSE-TCDPETGVCNCRDNTA 746
Query: 62 GLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSK 120
G C++C GY+G S + + + D C G S V + E + C C G G +
Sbjct: 747 GPHCEKCSDGYYGDSTVGT-SSDCQPCPCPGGSSCAVVPKTQEVV---CTNCPTGTTGKR 802
Query: 121 CNECLDP--NKKLGPNGCMPGMEVKPCNG--EPPVI---NLQTGVELDC 162
C C D LG NG + + CN +P + N TG L C
Sbjct: 803 CELCDDGYFGDPLGRNGPVRLCRLCQCNDNIDPNAVGNCNRLTGECLKC 851
Score = 122 (48.0 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 37/131 (28%), Positives = 50/131 (38%)
Query: 52 EQCKCKQGVGGLKCDRCEPGYWGLS-KISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRC 110
E C C G GG C+ C GY + + Y+P C+ C C+ E C+ TG C
Sbjct: 687 ESCTCPVGYGGQFCEMCLSGYRRETPSLGPYSP----CVLCTCNGHS---ETCDPETGVC 739
Query: 111 VCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPP---VINLQTGVELDCGSGAN 167
C+ G C +C D G + PC G V Q V +C +G
Sbjct: 740 NCRDNTAGPHCEKCSDGYYGDSTVGTSSDCQPCPCPGGSSCAVVPKTQEVVCTNCPTGTT 799
Query: 168 REDCP--SDAY 176
+ C D Y
Sbjct: 800 GKRCELCDDGY 810
>MGI|MGI:99914 [details] [associations]
symbol:Lamc1 "laminin, gamma 1" species:10090 "Mus musculus"
[GO:0005201 "extracellular matrix structural constituent"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISO] [GO:0005604
"basement membrane" evidence=ISO;IDA] [GO:0005605 "basal lamina"
evidence=IDA] [GO:0005606 "laminin-1 complex" evidence=ISO]
[GO:0006461 "protein complex assembly" evidence=ISO] [GO:0007155
"cell adhesion" evidence=ISO] [GO:0016477 "cell migration"
evidence=ISO] [GO:0022617 "extracellular matrix disassembly"
evidence=ISO] [GO:0031012 "extracellular matrix" evidence=ISO]
[GO:0031175 "neuron projection development" evidence=IDA]
[GO:0031581 "hemidesmosome assembly" evidence=ISO] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=ISO]
[GO:0043208 "glycosphingolipid binding" evidence=IDA] [GO:0043259
"laminin-10 complex" evidence=IPI] [GO:0070062 "extracellular
vesicular exosome" evidence=ISO] MGI:MGI:99914 GO:GO:0016477
GO:GO:0006461 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Reactome:REACT_127416 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0031175 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
HOGENOM:HOG000019301 GO:GO:0043259 HOVERGEN:HBG100808
OrthoDB:EOG49GKFS EMBL:X05211 EMBL:J03484 EMBL:J02930 EMBL:J03749
IPI:IPI00400016 PIR:A28469 PIR:S55783 UniGene:Mm.1249 PDB:1KLO
PDB:1NPE PDB:1TLE PDB:4AQT PDBsum:1KLO PDBsum:1NPE PDBsum:1TLE
PDBsum:4AQT ProteinModelPortal:P02468 SMR:P02468 MINT:MINT-1031545
STRING:P02468 PhosphoSite:P02468 PaxDb:P02468 PRIDE:P02468
UCSC:uc007czu.1 InParanoid:P02468 EvolutionaryTrace:P02468
CleanEx:MM_LAMC1 Genevestigator:P02468
GermOnline:ENSMUSG00000026478 Uniprot:P02468
Length = 1607
Score = 222 (83.2 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 47/140 (33%), Positives = 65/140 (46%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTED--ACIEDTEQCKCKQ 58
+G Y C + ++G LA P + C + C CN G+ + +C T QC+C
Sbjct: 855 AGFYCDRCKEGFFG-----NPLAPNPADK-CKA-CACNPYGTVQQQSSCNPVTGQCQCLP 907
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
V G C C+PGY+ L S GC +C C GS C+ TG+C C+PG+ G
Sbjct: 908 HVSGRDCGTCDPGYYNLQ--SG-----QGCERCDCHALGSTNGQCDIRTGQCECQPGITG 960
Query: 119 SKCNECLDPNKKLGPNGCMP 138
C C + GP GC P
Sbjct: 961 QHCERCETNHFGFGPEGCKP 980
Score = 193 (73.0 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 40/110 (36%), Positives = 56/110 (50%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P L G GC C C+ LGST C T QC+C+ G+ G C+RCE ++G
Sbjct: 917 CDPGYYNLQSGQ---GC-ERCDCHALGSTNGQCDIRTGQCECQPGITGQHCERCETNHFG 972
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
+ P+ GC C C GS+ C+ GRC C+ G G++C++C
Sbjct: 973 ------FGPE--GCKPCDCHHEGSLSLQCKD-DGRCECREGFVGNRCDQC 1013
Score = 173 (66.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 51/173 (29%), Positives = 78/173 (45%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCD 66
C D ++G + + GP P C N + C T +C KC G CD
Sbjct: 805 CDDGYFG----DPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCD 860
Query: 67 RCEPGYWGLSKISSYAPD-IDGCLKCGCSQFGSVRED--CEQMTGRCVCKPGVKGSKCNE 123
RC+ G++G + AP+ D C C C+ +G+V++ C +TG+C C P V G C
Sbjct: 861 RCKEGFFG----NPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGT 916
Query: 124 CLDP---NKKLGPNGC--MPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
C DP N + G GC + NG+ +++TG + +C G + C
Sbjct: 917 C-DPGYYNLQSG-QGCERCDCHALGSTNGQ---CDIRTG-QCECQPGITGQHC 963
Score = 169 (64.5 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 54/183 (29%), Positives = 78/183 (42%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE--------- 52
G+ + CL ++ P + A+ + P C CN G +++ C D E
Sbjct: 311 GVDCEKCLP-FFNDRPWRRATAESASES-LP--CDCN--GRSQE-CYFDPELYRSTGHGG 363
Query: 53 QC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV 111
C C+ G KC+RC ++ L + + C C CS GS+ C+ GRC
Sbjct: 364 HCTNCRDNTDGAKCERCRENFFRLG-------NTEACSPCHCSPVGSLSTQCDSY-GRCS 415
Query: 112 CKPGVKGSKCNECLDPNKKLGPNGCMP-GMEVKPCNGEPPVINLQTG--VELDCGSGANR 168
CKPGV G KC+ C L GC P +++ G N++TG V D G N
Sbjct: 416 CKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDLR---GSTDECNVETGRCVCKDNVEGFNC 472
Query: 169 EDC 171
E C
Sbjct: 473 ERC 475
Score = 135 (52.6 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 43/157 (27%), Positives = 67/157 (42%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ--CK-CK 57
+G + + C D +YG + TL D CP C G + A + T++ C C
Sbjct: 745 AGPHCEKCSDGYYG----DSTLGTSSDCQPCP--CP----GGSSCAIVPKTKEVVCTHCP 794
Query: 58 QGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQF--GSVREDCEQMTGRCV-CKP 114
G G +C+ C+ GY+G + S P + C C C+ + +C ++TG C+ C
Sbjct: 795 TGTAGKRCELCDDGYFG-DPLGSNGP-VRLCRPCQCNDNIDPNAVGNCNRLTGECLKCIY 852
Query: 115 GVKGSKCNECLDP--NKKLGPNGCMPGMEVKPCNGEP 149
G C+ C + L PN P + K C P
Sbjct: 853 NTAGFYCDRCKEGFFGNPLAPN---PADKCKACACNP 886
Score = 134 (52.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 33/83 (39%), Positives = 40/83 (48%)
Query: 29 AGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
AGC C C+ GST D C +T +C CK V G C+RC+PG++ L S P GC
Sbjct: 438 AGC-RPCSCDLRGST-DECNVETGRCVCKDNVEGFNCERCKPGFFNLE---SSNPK--GC 490
Query: 89 LKCGCSQFGSVREDCEQMTGRCV 111
C C SV C G V
Sbjct: 491 TPCFCFGHSSV---CTNAVGYSV 510
Score = 128 (50.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 49/160 (30%), Positives = 67/160 (41%)
Query: 15 CCPD--NKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGY 72
C P +T + GP + C C CN G +E C +T C C+ G C++C GY
Sbjct: 702 CLPGYRRETPSLGPYSP-CV-LCTCN--GHSE-TCDPETGVCDCRDNTAGPHCEKCSDGY 756
Query: 73 WGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNECLDP--NK 129
+G S + + + D C G S V + E + C C G G +C C D
Sbjct: 757 YGDSTLGT-SSDCQPCPCPGGSSCAIVPKTKEVV---CTHCPTGTAGKRCELCDDGYFGD 812
Query: 130 KLGPNGCMPGMEVKPC----NGEPPVI---NLQTGVELDC 162
LG NG P +PC N +P + N TG L C
Sbjct: 813 PLGSNG--PVRLCRPCQCNDNIDPNAVGNCNRLTGECLKC 850
Score = 127 (49.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 33/101 (32%), Positives = 44/101 (43%)
Query: 52 EQCKCKQGVGGLKCDRCEPGYWGLS-KISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRC 110
E C C G GG C+ C PGY + + Y+P C+ C C+ E C+ TG C
Sbjct: 686 ESCTCPVGYGGQFCETCLPGYRRETPSLGPYSP----CVLCTCNGHS---ETCDPETGVC 738
Query: 111 VCKPGVKGSKCNECLDP---NKKLGPNG-CMPGMEVKPCNG 147
C+ G C +C D + LG + C P PC G
Sbjct: 739 DCRDNTAGPHCEKCSDGYYGDSTLGTSSDCQPC----PCPG 775
>UNIPROTKB|F1NK49 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0022617
"extracellular matrix disassembly" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] GO:GO:0016477 GO:GO:0006461 GO:GO:0007155
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 GO:GO:0043259 OMA:EATDYPW
EMBL:AADN02034183 EMBL:AADN02034182 IPI:IPI00596936
Ensembl:ENSGALT00000007355 ArrayExpress:F1NK49 Uniprot:F1NK49
Length = 1608
Score = 222 (83.2 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 55/143 (38%), Positives = 67/143 (46%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVG 61
G + + C DS+Y G + GC C CN +GS C + QC CK GV
Sbjct: 375 GAHCERCRDSFYRL---------GSEE-GC-LPCSCNPVGSLSTQC-DSYGQCSCKPGVM 422
Query: 62 GLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
G KCDRC+PG+ LS+ GC C C+ GS E C TGRC CK V+G C
Sbjct: 423 GEKCDRCQPGFHSLSEA--------GCRPCSCNPAGSTGE-CNMETGRCTCKDNVEGFHC 473
Query: 122 NEC------LDPNKKLGPNGCMP 138
C LDP+ P GC P
Sbjct: 474 ERCKPGFFHLDPSN---PRGCTP 493
Score = 220 (82.5 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 50/151 (33%), Positives = 71/151 (47%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGST--EDACIEDTEQCKCKQ 58
+G Y C D ++G LA P + C + C CN G+ + +C + T QC+C
Sbjct: 856 AGFYCDRCKDGFFG-----NPLATNPADK-CRA-CHCNPYGTVNQQTSCNQVTGQCECLS 908
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
V C CEPG++ L GC +C C GS C+ TG+C C+PGV G
Sbjct: 909 HVTERDCSACEPGFFNLQSGR-------GCERCDCHALGSTNGQCDIWTGQCECQPGVTG 961
Query: 119 SKCNECLDPNKKLGPNGCMPGMEVKPCNGEP 149
+C+ C + GP GC KPC+ +P
Sbjct: 962 QRCDRCEANHFGFGPEGC------KPCDCDP 986
Score = 199 (75.1 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 40/95 (42%), Positives = 52/95 (54%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC C C+ LGST C T QC+C+ GV G +CDRCE ++G + P+ GC
Sbjct: 930 GC-ERCDCHALGSTNGQCDIWTGQCECQPGVTGQRCDRCEANHFG------FGPE--GCK 980
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C C GS C + GRC CK G GS+C++C
Sbjct: 981 PCDCDPEGSRALQCRE-DGRCECKEGFVGSRCDQC 1014
Score = 148 (57.2 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 49/173 (28%), Positives = 77/173 (44%)
Query: 8 CLDSWYGCCPDNKTLAQGPDN-AGCPSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKC 65
C D+++G P + A P C N +G+ C T +C KC G C
Sbjct: 806 CDDAYFGD-PLGENGAVRPCRLCQCNDNIDPNAVGN----CNRQTGECLKCIYNTAGFYC 860
Query: 66 DRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED--CEQMTGRCVCKPGVKGSKCNE 123
DRC+ G++G ++ A D C C C+ +G+V + C Q+TG+C C V C+
Sbjct: 861 DRCKDGFFGNPLATNPA---DKCRACHCNPYGTVNQQTSCNQVTGQCECLSHVTERDCSA 917
Query: 124 CLDP---NKKLGPNGC--MPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
C +P N + G GC + NG+ ++ TG + +C G + C
Sbjct: 918 C-EPGFFNLQSG-RGCERCDCHALGSTNGQ---CDIWTG-QCECQPGVTGQRC 964
Score = 142 (55.0 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 48/158 (30%), Positives = 64/158 (40%)
Query: 15 CCPD--NKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGY 72
C P +T GP + P C CN G +E C +T C C+ G C++C GY
Sbjct: 703 CSPGYRRETPGLGPYSPCVP--CTCN--GHSE-TCDPETGMCDCRDNTAGSHCEKCSDGY 757
Query: 73 WGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNECLDP--NK 129
+G + A D C G S V E + C C+ G G +C C D
Sbjct: 758 YG-DATAGTALDCQPCPCPGGSSCAVVPRTKEVV---CTSCQTGTTGKRCELCDDAYFGD 813
Query: 130 KLGPNGCMPGMEVKPCNG--EPPVI---NLQTGVELDC 162
LG NG + + CN +P + N QTG L C
Sbjct: 814 PLGENGAVRPCRLCQCNDNIDPNAVGNCNRQTGECLKC 851
Score = 139 (54.0 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 44/146 (30%), Positives = 59/146 (40%)
Query: 52 EQCKCKQGVGGLKCDRCEPGYWGLSK-ISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRC 110
E C C G G C+RC PGY + + Y+P C+ C C+ E C+ TG C
Sbjct: 687 ESCSCPAGYEGQFCERCSPGYRRETPGLGPYSP----CVPCTCNGHS---ETCDPETGMC 739
Query: 111 VCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGS---GAN 167
C+ GS C +C D G + PC G + E+ C S G
Sbjct: 740 DCRDNTAGSHCEKCSDGYYGDATAGTALDCQPCPCPGGSSCAVVPRTKEVVCTSCQTGTT 799
Query: 168 REDCP--SDAYCH--ITQNFA-RCCR 188
+ C DAY + +N A R CR
Sbjct: 800 GKRCELCDDAYFGDPLGENGAVRPCR 825
Score = 124 (48.7 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 45/193 (23%), Positives = 73/193 (37%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
+G + + C D +YG L P CP C + T++ C+ G
Sbjct: 746 AGSHCEKCSDGYYGDATAGTALDCQP--CPCPGGSSCAVVPRTKEVVCTS-----CQTGT 798
Query: 61 GGLKCDRCEPGYWG--LSKISSYAPDIDGCLKCGCSQF--GSVREDCEQMTGRCV-CKPG 115
G +C+ C+ Y+G L + + P C C C+ + +C + TG C+ C
Sbjct: 799 TGKRCELCDDAYFGDPLGENGAVRP----CRLCQCNDNIDPNAVGNCNRQTGECLKCIYN 854
Query: 116 VKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEP-PVINLQTGVELDCGSGANREDCPSD 174
G C+ C D P P + + C+ P +N QT C + +C S
Sbjct: 855 TAGFYCDRCKDGFFG-NPLATNPADKCRACHCNPYGTVNQQTS----CNQVTGQCECLS- 908
Query: 175 AYCHITQNFARCC 187
H+T+ C
Sbjct: 909 ---HVTERDCSAC 918
>UNIPROTKB|F1PHK9 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043259 "laminin-10 complex" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IEA]
[GO:0031581 "hemidesmosome assembly" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0022617
"extracellular matrix disassembly" evidence=IEA] [GO:0016477 "cell
migration" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] GO:GO:0016477 GO:GO:0006461
InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 GO:GO:0043259 OMA:EATDYPW
EMBL:AAEX03005149 EMBL:AAEX03005150 Ensembl:ENSCAFT00000020993
Uniprot:F1PHK9
Length = 1487
Score = 221 (82.9 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 58/183 (31%), Positives = 82/183 (44%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGST--EDACIEDTEQCKCKQ 58
+G Y C D ++G LA P + C + C CN G+ + +C T QC+C
Sbjct: 735 AGFYCDRCKDGFFG-----NPLAPNPADK-CRA-CACNPYGTVKQQSSCNPVTGQCECLP 787
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
V G C C+PG++ L S GC +C C GS C+ TG+C C+PG+ G
Sbjct: 788 HVTGRDCGACDPGFYNLQ--SG-----QGCERCDCHALGSTNGQCDIRTGQCECQPGITG 840
Query: 119 SKCNECLDPNKKLGPNGCMPGMEVKPCNGEPP-VINLQTGVE--LDCGSG--ANREDCPS 173
C C + GP GC KPC+ P ++LQ + +C G NR D
Sbjct: 841 QHCEHCEVNHFGFGPEGC------KPCDCHPEGSVSLQCKDDGRCECKQGFVGNRCDQCE 894
Query: 174 DAY 176
+ Y
Sbjct: 895 ENY 897
Score = 213 (80.0 bits), Expect = 7.1e-16, P = 7.1e-16
Identities = 44/110 (40%), Positives = 57/110 (51%)
Query: 33 STCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
S C C+ +GS C + +C CK GV G KCDRC+PGY L++ GC C
Sbjct: 274 SPCHCSPVGSLSTQC-DSYGRCSCKPGVMGEKCDRCQPGYHSLTEA--------GCRPCS 324
Query: 93 CSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPN----KKLGPNGCMP 138
C+ GS+ ++C TGRCVCK V+G C C P + P GC P
Sbjct: 325 CNPAGSI-DECNVETGRCVCKDNVEGFNCERC-KPGFFNLESSNPRGCTP 372
Score = 164 (62.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 46/148 (31%), Positives = 69/148 (46%)
Query: 35 CGCNKL--GSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPD-IDGCLK 90
C CN + C T +C KC G CDRC+ G++G + AP+ D C
Sbjct: 706 CQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFG----NPLAPNPADKCRA 761
Query: 91 CGCSQFGSVRED--CEQMTGRCVCKPGVKGSKCNECLDP---NKKLGPNGC--MPGMEVK 143
C C+ +G+V++ C +TG+C C P V G C C DP N + G GC +
Sbjct: 762 CACNPYGTVKQQSSCNPVTGQCECLPHVTGRDCGAC-DPGFYNLQSG-QGCERCDCHALG 819
Query: 144 PCNGEPPVINLQTGVELDCGSGANREDC 171
NG+ +++TG + +C G + C
Sbjct: 820 STNGQ---CDIRTG-QCECQPGITGQHC 843
Score = 164 (62.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 58/198 (29%), Positives = 81/198 (40%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE--------- 52
G+ + CL ++ P + A+ P C CN G +++ C D E
Sbjct: 191 GVDCEKCLP-FFNDRPWRRATAESASEC-LP--CDCN--GRSQE-CYFDPELYRSTGHGG 243
Query: 53 QC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV 111
C C+ G C+RC ++ L +S A C C CS GS+ C+ GRC
Sbjct: 244 HCTNCQGNTDGANCERCRENFFRL--VSHEA-----CSPCHCSPVGSLSTQCDSY-GRCS 295
Query: 112 CKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTG--VELDCGSGANRE 169
CKPGV G KC+ C L GC P P G N++TG V D G N E
Sbjct: 296 CKPGVMGEKCDRCQPGYHSLTEAGCRP-CSCNPA-GSIDECNVETGRCVCKDNVEGFNCE 353
Query: 170 DCPSDAYCHITQNFARCC 187
C + ++ + R C
Sbjct: 354 RC-KPGFFNLESSNPRGC 370
Score = 126 (49.4 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 41/157 (26%), Positives = 65/157 (41%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ--C-KCK 57
+G + + C D +YG + T D CP C G + A + T++ C C
Sbjct: 625 AGPHCEKCSDGYYG----DSTTGSSSDCQPCP--CP----GGSSCAVVPKTQEVVCTNCP 674
Query: 58 QGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQF--GSVREDCEQMTGRCV-CKP 114
G G +C+ C+ GY+G + P + C C C+ + +C ++TG C+ C
Sbjct: 675 TGTTGKRCELCDDGYFG-DPLGRNGP-VRLCRLCQCNDNIDPNAVGNCNRLTGECLKCIY 732
Query: 115 GVKGSKCNECLDP--NKKLGPNGCMPGMEVKPCNGEP 149
G C+ C D L PN P + + C P
Sbjct: 733 NTAGFYCDRCKDGFFGNPLAPN---PADKCRACACNP 766
Score = 125 (49.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 37/131 (28%), Positives = 50/131 (38%)
Query: 52 EQCKCKQGVGGLKCDRCEPGYWGLS-KISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRC 110
E C C G GG C+ C GY + + Y+P C+ C C+ E C+ TG C
Sbjct: 566 ESCTCPVGYGGQFCEMCLSGYRRETPSLGPYSP----CVLCTCNGHS---ETCDPETGVC 618
Query: 111 VCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPP---VINLQTGVELDCGSGAN 167
C+ G C +C D G + PC G V Q V +C +G
Sbjct: 619 DCRDNTAGPHCEKCSDGYYGDSTTGSSSDCQPCPCPGGSSCAVVPKTQEVVCTNCPTGTT 678
Query: 168 REDCP--SDAY 176
+ C D Y
Sbjct: 679 GKRCELCDDGY 689
Score = 123 (48.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 49/169 (28%), Positives = 69/169 (40%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVG 61
G + + CL + +T + GP + C C CN G +E C +T C C+
Sbjct: 576 GQFCEMCLSGYR-----RETPSLGPYSP-CV-LCTCN--GHSE-TCDPETGVCDCRDNTA 625
Query: 62 GLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSK 120
G C++C GY+G S S + D C G S V + E + C C G G +
Sbjct: 626 GPHCEKCSDGYYGDSTTGS-SSDCQPCPCPGGSSCAVVPKTQEVV---CTNCPTGTTGKR 681
Query: 121 CNECLDP--NKKLGPNGCMPGMEVKPCNG--EPPVI---NLQTGVELDC 162
C C D LG NG + + CN +P + N TG L C
Sbjct: 682 CELCDDGYFGDPLGRNGPVRLCRLCQCNDNIDPNAVGNCNRLTGECLKC 730
>UNIPROTKB|F1P420 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0032224
"positive regulation of synaptic transmission, cholinergic"
evidence=IEA] [GO:0042383 "sarcolemma" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 GO:GO:0042383 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0032224
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:NCNSFGS EMBL:AADN02049678 EMBL:AADN02049679 EMBL:AADN02049680
EMBL:AADN02049681 EMBL:AADN02049682 EMBL:AADN02049683
EMBL:AADN02049684 EMBL:AADN02049685 EMBL:AADN02049686
EMBL:AADN02049687 EMBL:AADN02049688 EMBL:AADN02049689
EMBL:AADN02049690 EMBL:AADN02049691 EMBL:AADN02049692
EMBL:AADN02049693 EMBL:AADN02049694 EMBL:AADN02049695
EMBL:AADN02049696 EMBL:AADN02049697 EMBL:AADN02049698
EMBL:AADN02049699 EMBL:AADN02049700 EMBL:AADN02049701
EMBL:AADN02049702 EMBL:AADN02049703 EMBL:AADN02049704
EMBL:AADN02049705 EMBL:AADN02049706 EMBL:AADN02049707
IPI:IPI00582275 Ensembl:ENSGALT00000022704 Uniprot:F1P420
Length = 3090
Score = 219 (82.2 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 49/138 (35%), Positives = 66/138 (47%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
+G Y + C D ++G D + C C C+ GS + C T QC+CK V
Sbjct: 857 TGQYCERCADGYFGDALDARN---------C-QPCRCHVNGSISEICDSQTGQCECKANV 906
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSK 120
G +CD C+P +GL SS GC+ C C+ FGS DC+ G+C C+PGV G K
Sbjct: 907 IGRQCDTCKPETFGLQ--SSR-----GCVPCNCNSFGSKSFDCDG-NGQCYCQPGVTGKK 958
Query: 121 CNECLDPNKKLGPNGCMP 138
C+ C GC P
Sbjct: 959 CDRCAHGFYNFEEGGCTP 976
Score = 171 (65.3 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 33/98 (33%), Positives = 47/98 (47%)
Query: 27 DNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
+ GC + C C++ G+ C + +C C G CD+C P +WG I +
Sbjct: 970 EEGGC-TPCACSQFGNN---CDPVSGRCICPPNTIGEMCDKCAPNHWG-HDI------VH 1018
Query: 87 GCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
GC C CS G++ C+ TG C C+P G KC EC
Sbjct: 1019 GCKPCDCSLIGALSAQCDLNTGCCFCRPEFSGDKCTEC 1056
Score = 170 (64.9 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 53/159 (33%), Positives = 67/159 (42%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ-------- 53
GI ++C+D ++ P L PD C C C+ GS + C++D +
Sbjct: 349 GINCETCVDGYFR--PKG-VLPDSPDP--C-QPCSCDPNGSLHETCVKDEKHAEGDMLPG 402
Query: 54 -CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVC 112
C CK G G C RC GY G Y PD CL C CS GS D G CVC
Sbjct: 403 FCHCKTGYAGEHCSRCALGYTG------Y-PD---CLPCNCSVEGSANID--PCVGLCVC 450
Query: 113 KPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPV 151
K V+G C+ C L N G E C+G+ V
Sbjct: 451 KEHVEGENCDRCKSGFFNLQQNN-PKGCEECFCSGKTNV 488
Score = 160 (61.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 40/128 (31%), Positives = 56/128 (43%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE---QCK-C 56
+G + + C +YG + Q P CP + N + C+ + +C C
Sbjct: 1409 AGQHCERCALGFYGIIQGSPEDCQ-P--CACPLSISSNNFSPS---CVVEGPSDYRCTAC 1462
Query: 57 KQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGV 116
G G C+RC PGY G + P C +C C Q+GS+ C+ TG C CKPG
Sbjct: 1463 PPGYEGQYCERCSPGYTG----NPQTPG-GSCQECECDQYGSMPVPCDPATGVCTCKPGF 1517
Query: 117 KGSKCNEC 124
G KC C
Sbjct: 1518 TGWKCAGC 1525
Score = 144 (55.7 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 51/183 (27%), Positives = 68/183 (37%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ---C-KCK 57
G Y CL +YG K A+ CP N T C D C +C
Sbjct: 745 GSYCDRCLPGFYG--DPTKGTAEDCQLCACPLNIPSNNFSPT---CHFDQSHGLICDECP 799
Query: 58 QGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQ---FGSVREDCEQMTGRC-VCK 113
G G +C+RC GY+G I C C C+ F S+ C+ ++G C +CK
Sbjct: 800 VGYVGPRCERCAEGYFGQPLIPG-----GSCQPCQCNNNLDF-SIPGSCDSLSGACLICK 853
Query: 114 PGVKGSKCNECLDP--NKKLGPNGCMPGMEVKPC--NGE-PPVINLQTGVELDCGSGANR 168
G G C C D L C P C NG + + QTG + +C +
Sbjct: 854 SGTTGQYCERCADGYFGDALDARNCQPCR----CHVNGSISEICDSQTG-QCECKANVIG 908
Query: 169 EDC 171
C
Sbjct: 909 RQC 911
Score = 137 (53.3 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 33/111 (29%), Positives = 46/111 (41%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC C C+ +G+ C +T C C+ G KC C GYW + + + G
Sbjct: 1019 GC-KPCDCSLIGALSAQCDLNTGCCFCRPEFSGDKCTECRSGYWNYPQCIACQCVLSGTD 1077
Query: 90 KCGC-SQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLG---PNGC 136
C + G+ C TG+C CK V+G C+ C L P GC
Sbjct: 1078 PRSCETDLGTC--SCVNHTGQCSCKVNVEGVHCDRCKSGTFGLSARNPLGC 1126
Score = 129 (50.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 55/194 (28%), Positives = 74/194 (38%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGYW 73
C P ++ + G G + C C G E +C + T +C CK GG CDRC PG++
Sbjct: 701 CWPQHRRV-NGTIFGGVCTPCTC--FGHAE-SCDDITGECLDCKHNTGGSYCDRCLPGFY 756
Query: 74 GLSKISSYAPDIDGCLKCGCS---QFGSVREDC--EQMTGR-C-VCKPGVKGSKCNECLD 126
G A D C C C + C +Q G C C G G +C C +
Sbjct: 757 G-DPTKGTAED---CQLCACPLNIPSNNFSPTCHFDQSHGLICDECPVGYVGPRCERCAE 812
Query: 127 P--NKKLGPNG-CMPGMEVKPCNGE-----PPVINLQTGVELDCGSGANREDCP--SDAY 176
+ L P G C P CN P + +G L C SG + C +D Y
Sbjct: 813 GYFGQPLIPGGSCQPCQ----CNNNLDFSIPGSCDSLSGACLICKSGTTGQYCERCADGY 868
Query: 177 CHITQNFARC--CR 188
+ C CR
Sbjct: 869 FGDALDARNCQPCR 882
Score = 120 (47.3 bits), Expect = 0.00032, P = 0.00032
Identities = 38/134 (28%), Positives = 51/134 (38%)
Query: 42 STEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG-CLKCGCSQFGSVR 100
ST E C C G G C+ C P + +++ G C C C FG
Sbjct: 675 STGRKLASPVELCDCPPGYAGTSCEYCWPQH---RRVNGTI--FGGVCTPCTC--FGHA- 726
Query: 101 EDCEQMTGRCV-CKPGVKGSKCNECLDPNKKLGPN-GCMPGMEVKPCNGEPPVINLQTGV 158
E C+ +TG C+ CK GS C+ CL P P G ++ C P N
Sbjct: 727 ESCDDITGECLDCKHNTGGSYCDRCL-PGFYGDPTKGTAEDCQLCACPLNIPSNNFSPTC 785
Query: 159 ELDCGSGANREDCP 172
D G ++CP
Sbjct: 786 HFDQSHGLICDECP 799
Score = 37 (18.1 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 135 GCMPGMEVKPCNGEPPVINLQTGVEL 160
GC+ +++ +P IN +EL
Sbjct: 3055 GCIRSLKLTKGTAKPQEINFSKALEL 3080
>UNIPROTKB|F1S0X0 [details] [associations]
symbol:LAMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IEA] GO:GO:0007601 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0060041 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GeneTree:ENSGT00690000102103 OMA:QRGRRCE
EMBL:FP236754 EMBL:CU407178 Ensembl:ENSSSCT00000006279
Uniprot:F1S0X0
Length = 1583
Score = 221 (82.9 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 47/112 (41%), Positives = 56/112 (50%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P L G GC S C C+ LGS ED C T QC C+ GV G CDRC+ G++G
Sbjct: 908 CSPGFYDLQPG---RGCRS-CKCHPLGSQEDQCHPKTGQCPCRPGVEGQSCDRCQLGFFG 963
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
S I GC C CS G+ C + CVC+PG G KC+ C D
Sbjct: 964 FS--------IRGCRACRCSPLGAASAQCHE-NSTCVCRPGFVGYKCDRCQD 1006
Score = 194 (73.4 bits), Expect = 8.1e-14, P = 8.1e-14
Identities = 43/117 (36%), Positives = 58/117 (49%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ GS C +D+ CKCK V G KCDRC+PG+ LS+ GC C C+
Sbjct: 389 CDCHPAGSLHLQC-DDSGTCKCKPTVTGWKCDRCQPGFHSLSE--------GGCRPCTCN 439
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC------LDPNKKLGPNGCMPGMEVKPC 145
GS+ C+ +GRC CK V+G+ C+ C L P+ G + C K C
Sbjct: 440 SAGSLGT-CDPRSGRCPCKENVEGNLCDRCRPGTFNLQPHNPAGCSSCFCYGHSKAC 495
Score = 193 (73.0 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 43/126 (34%), Positives = 58/126 (46%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGST--EDACIEDTEQCKCKQ 58
+G + + C + +YG LA P++ P C CN GS + C T QC C
Sbjct: 846 TGAHCERCQEGFYG-----DALASLPEDKCVP--CSCNPGGSVGEQQPCDLVTGQCSCLP 898
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
V G C C PG++ L P GC C C GS + C TG+C C+PGV+G
Sbjct: 899 HVTGRDCGHCSPGFYDLQ------PG-RGCRSCKCHPLGSQEDQCHPKTGQCPCRPGVEG 951
Query: 119 SKCNEC 124
C+ C
Sbjct: 952 QSCDRC 957
Score = 172 (65.6 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 49/168 (29%), Positives = 72/168 (42%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCD 66
C D ++G D L+ P P C N + C T C +C G C+
Sbjct: 796 CDDGFFG---DPLGLSGAPQPCR-PCQCSGNVDPNAVGNCDPLTGHCLRCLHNTTGAHCE 851
Query: 67 RCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED--CEQMTGRCVCKPGVKGSKCNEC 124
RC+ G++G ++S P+ D C+ C C+ GSV E C+ +TG+C C P V G C C
Sbjct: 852 RCQEGFYG-DALASL-PE-DKCVPCSCNPGGSVGEQQPCDLVTGQCSCLPHVTGRDCGHC 908
Query: 125 LDPNKKLGPN-GCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
L P GC + P + + +TG + C G + C
Sbjct: 909 SPGFYDLQPGRGCR-SCKCHPLGSQEDQCHPKTG-QCPCRPGVEGQSC 954
Score = 138 (53.6 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 41/137 (29%), Positives = 59/137 (43%)
Query: 15 CCP--DNKTLAQGPDNAGCPSTC-GCNKLGSTEDACIEDTE---------QC-KCKQGVG 61
C P ++ A+G A + C CN G +E+ CI D E +C C+
Sbjct: 310 CLPFFQDRPWARGTAEAA--NECLPCNCSGHSEE-CIFDRELFRTSGHGGRCLHCRDHTA 366
Query: 62 GLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
G C+RC+ ++ + P + C C C GS+ C+ +G C CKP V G KC
Sbjct: 367 GPHCERCQENFY------RWNPQMP-CQPCDCHPAGSLHLQCDD-SGTCKCKPTVTGWKC 418
Query: 122 NECLDPNKKLGPNGCMP 138
+ C L GC P
Sbjct: 419 DRCQPGFHSLSEGGCRP 435
Score = 134 (52.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 52/175 (29%), Positives = 69/175 (39%)
Query: 15 CCPDNK--TLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGY 72
C P K T GP A C C CN+ G+ C +T C C G C+RC PG+
Sbjct: 694 CAPGYKRETPLGGP-YASCVP-CICNQHGT----CDPNTGICLCGHHTEGPSCERCLPGF 747
Query: 73 WGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNECLDP--NK 129
+G + + D C C C + E C C PG +G +C C D
Sbjct: 748 YG----NPFTGQADDCQPCPCPGQSACTTMPESGEVVCTHCPPGQRGQRCEICDDGFFGD 803
Query: 130 KLGPNGCMPGMEVKPCNG--EPPVI-NLQ--TGVELDC---GSGANREDCPSDAY 176
LG +G C+G +P + N TG L C +GA+ E C Y
Sbjct: 804 PLGLSGAPQPCRPCQCSGNVDPNAVGNCDPLTGHCLRCLHNTTGAHCERCQEGFY 858
Score = 133 (51.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 34/113 (30%), Positives = 47/113 (41%)
Query: 52 EQCKCKQGVGGLKCDRCEPGYWGLSKISS-YAPDIDGCLKCGCSQFGSVREDCEQMTGRC 110
E C C G G C+ C PGY + + YA C+ C C+Q G+ C+ TG C
Sbjct: 678 ETCSCPSGYSGQFCESCAPGYKRETPLGGPYA----SCVPCICNQHGT----CDPNTGIC 729
Query: 111 VCKPGVKGSKCNECLDPNKKLGP-NGCMPGMEVKPCNGEPPVINLQTGVELDC 162
+C +G C CL P P G + PC G+ + E+ C
Sbjct: 730 LCGHHTEGPSCERCL-PGFYGNPFTGQADDCQPCPCPGQSACTTMPESGEVVC 781
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 52/182 (28%), Positives = 68/182 (37%)
Query: 8 CLDSWYGCCPDNKTLAQGPD--NAGCPSTCGCNKLG-STEDACIEDTEQCKCKQGVGGLK 64
CL +YG N Q D CP C + S E C C G G +
Sbjct: 743 CLPGFYG----NPFTGQADDCQPCPCPGQSACTTMPESGEVVCTH------CPPGQRGQR 792
Query: 65 CDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED----CEQMTGRCV-CKPGVKGS 119
C+ C+ G++G S AP C C CS G+V + C+ +TG C+ C G+
Sbjct: 793 CEICDDGFFGDPLGLSGAPQ--PCRPCQCS--GNVDPNAVGNCDPLTGHCLRCLHNTTGA 848
Query: 120 KCNECLD----------PNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANRE 169
C C + P K P C PG V GE +L TG + C
Sbjct: 849 HCERCQEGFYGDALASLPEDKCVPCSCNPGGSV----GEQQPCDLVTG-QCSCLPHVTGR 903
Query: 170 DC 171
DC
Sbjct: 904 DC 905
>ZFIN|ZDB-GENE-060503-794 [details] [associations]
symbol:ush2a "Usher syndrome 2A (autosomal
recessive, mild)" species:7955 "Danio rerio" [GO:0042462 "eye
photoreceptor cell development" evidence=IGI] InterPro:IPR003961
Pfam:PF00041 PROSITE:PS50853 SMART:SM00060 ZFIN:ZDB-GENE-060503-794
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0042462 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 eggNOG:NOG245744 HOGENOM:HOG000124780
HOVERGEN:HBG094138 OMA:EIRIQAC OrthoDB:EOG4B5P57 InterPro:IPR026915
PANTHER:PTHR10574:SF53 EMBL:AL845481 EMBL:CT027582 EMBL:AL928842
EMBL:AL929128 IPI:IPI00882773 UniGene:Dr.118940 UniGene:Dr.158626
Ensembl:ENSDART00000086201 InParanoid:Q1MTD2 Uniprot:Q1MTD2
Length = 5236
Score = 226 (84.6 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 44/112 (39%), Positives = 63/112 (56%)
Query: 30 GCPSTCGCNKLGSTED--ACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
GC + C CN G+ + C +D+ QC+CK V GL CDRC G+ L+ + PD G
Sbjct: 702 GCRA-CNCNTAGTVQPDITCHQDSGQCQCKANVIGLTCDRCNYGFKFLNHTN---PD--G 755
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNG-CMP 138
C+ CGC +GS+ + C TG+C CK GV+G C+ C+ +G C+P
Sbjct: 756 CISCGCDPWGSLHQFCNPFTGQCECKAGVRGLLCDTCIPHFYSQNSSGVCLP 807
Score = 200 (75.5 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 49/161 (30%), Positives = 74/161 (45%)
Query: 8 CLDSWYG--C--CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQ-GVGG 62
CL + YG C C L++ + C C C+ +G+ C + QC C + G
Sbjct: 936 CLPTRYGRDCGTCKPGFFLSEA-GLSEC-EVCECHSVGAMGQVCAAHSGQCVCAHPSLTG 993
Query: 63 LKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN 122
+CD+C+ ++G + P + C CGC G C TG+C+CKP V G KC+
Sbjct: 994 HRCDQCQDLFFGFN------PSVGRCEPCGCDPVGGFNGTCHPQTGQCLCKPFVTGDKCD 1047
Query: 123 ECLDPNKKLGPNGCMPGMEVKPCNGEPP---VINLQTGVEL 160
C++ + PN + G P PP V+N T +EL
Sbjct: 1048 ACVEGASFMDPNNYL-GCSKDPQQQPPPLGRVLN-STTIEL 1086
Score = 181 (68.8 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 41/119 (34%), Positives = 57/119 (47%)
Query: 27 DNAGCPSTCGCNKLGSTED-ACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
+++G C C+ GS +C T QCKCK G +CD C GY L + +S
Sbjct: 800 NSSGVCLPCNCSLNGSVPGTSCDAVTGQCKCKPHTEGRRCDVCRDGYHSLDRSNSL---- 855
Query: 86 DGCLKCGCSQFGSVRED--CEQMTGRCVCKPGVKGSKCNECLDPNKKLGP----NGCMP 138
GCL C C G+V C++ TG+C+CK V+ +CN C L +GC P
Sbjct: 856 -GCLPCQCDLRGTVNGSGVCDKTTGQCLCKNNVESLRCNRCSAHTYNLSSANATHGCQP 913
Score = 181 (68.8 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 51/161 (31%), Positives = 77/161 (47%)
Query: 35 CGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
C C+ G+ + C QCKCK+ V G +C++C+ G++ L S+ A DGC C
Sbjct: 653 CECHSAGTINASLHCEPIGGQCKCKRHVSGRQCNQCQHGFYKLQ--SALA---DGCRACN 707
Query: 93 CSQFGSVRED--CEQMTGRCVCKPGVKGSKCNECLDPNKKLG---PNGCMP-GMEVKPCN 146
C+ G+V+ D C Q +G+C CK V G C+ C K L P+GC+ G + P
Sbjct: 708 CNTAGTVQPDITCHQDSGQCQCKANVIGLTCDRCNYGFKFLNHTNPDGCISCGCD--PWG 765
Query: 147 GEPPVINLQTGVELDCGSGANREDCPSDAYCHITQNFARCC 187
N TG + +C +G C + +QN + C
Sbjct: 766 SLHQFCNPFTG-QCECKAGVRGLLCDTCIPHFYSQNSSGVC 805
Score = 158 (60.7 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 40/134 (29%), Positives = 59/134 (44%)
Query: 16 CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C D ++ GC C C+ G+ + C + T QC CK V L+C+RC +
Sbjct: 842 CRDGYHSLDRSNSLGC-LPCQCDLRGTVNGSGVCDKTTGQCLCKNNVESLRCNRCSAHTY 900
Query: 74 GLSKISSYAPDIDGCLKCGCSQFGSVRED-CEQMTGRCVCKPGVKGSKCNECLDPNKKLG 132
LS ++ GC C C G+V C+ ++G+C+C P G C C P L
Sbjct: 901 NLSSANA----THGCQPCYCDHIGTVPATVCDPVSGQCICLPTRYGRDCGTC-KPGFFLS 955
Query: 133 PNGCMPGMEVKPCN 146
G + EV C+
Sbjct: 956 EAG-LSECEVCECH 968
>UNIPROTKB|F1PJ02 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 OMA:EPFYWRL GO:GO:0005606
EMBL:AAEX03005489 EMBL:AAEX03005490 EMBL:AAEX03005491
Ensembl:ENSCAFT00000029520 Uniprot:F1PJ02
Length = 3034
Score = 223 (83.6 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 52/137 (37%), Positives = 65/137 (47%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVG 61
G + + C D +YG D T C + C C+ GS D C DT C CK V
Sbjct: 832 GAHCERCADGFYG---DAVTAKN------CRA-CECHGKGSISDVCHLDTGLCDCKPHVT 881
Query: 62 GLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
G +CD+C PGY+GL GCL C CS GS+ +DC + G+C C PGV G KC
Sbjct: 882 GQQCDQCLPGYYGLDTGL-------GCLPCNCSASGSMSDDCTE-DGQCHCLPGVAGEKC 933
Query: 122 NECLDPNKKLGPNGCMP 138
+ C GC P
Sbjct: 934 DRCARGFYAYQDGGCTP 950
Score = 187 (70.9 bits), Expect = 9.4e-13, P = 9.4e-13
Identities = 53/151 (35%), Positives = 72/151 (47%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDT---------- 51
GI ++C+D +Y P ++ DN P C C+ GS CI+D
Sbjct: 323 GINCETCIDGYYR--PHK--VSPYEDNPCRP--CDCDPFGSLSSVCIKDELQSGLHKGKQ 376
Query: 52 -EQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED-CEQMTGR 109
QC CK+G G KCDRC+ GY +Y P C++C CS+ GSV ED C +
Sbjct: 377 PGQCPCKEGYAGEKCDRCQFGY------KAY-P---ACIRCECSRAGSVNEDPCSEP--- 423
Query: 110 CVCKPGVKGSKCNECLDPN----KKLGPNGC 136
C+CK V+G C+ C P K+ P GC
Sbjct: 424 CLCKENVEGDNCDLC-KPGFYNLKERNPEGC 453
Score = 183 (69.5 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 41/112 (36%), Positives = 52/112 (46%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P L G GC C C+ GS D C ED QC C GV G KCDRC G+
Sbjct: 888 CLPGYYGLDTG---LGC-LPCNCSASGSMSDDCTEDG-QCHCLPGVAGEKCDRCARGF-- 940
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
YA GC C C+ + C+ +G C+C P +G+ C++C D
Sbjct: 941 ------YAYQDGGCTPCDCAH---TQHTCDPESGACICPPHTRGATCDQCED 983
Score = 182 (69.1 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 35/98 (35%), Positives = 47/98 (47%)
Query: 28 NAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDID- 86
+ GC + C C T+ C ++ C C G CD+CE GYWG D++
Sbjct: 945 DGGC-TPCDC---AHTQHTCDPESGACICPPHTRGATCDQCEDGYWG--------HDLEL 992
Query: 87 GCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
GC C CS GS C+ +TG C CKP G C++C
Sbjct: 993 GCQACNCSAVGSASHGCDALTGHCPCKPAFGGLSCHQC 1030
Score = 167 (63.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 38/112 (33%), Positives = 50/112 (44%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC + C C+ +GS C T C CK GGL C +C GY + D+ G L
Sbjct: 993 GCQA-CNCSAVGSASHGCDALTGHCPCKPAFGGLSCHQCSLGYRDFPDCVACDCDLRGTL 1051
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKL---GPNGCMP 138
C + + C + TG C CK V G +C+EC L P GC+P
Sbjct: 1052 ADTCDEEQGLCS-CAEDTGTCSCKENVLGLQCSECRAGTYALHADDPLGCIP 1102
Score = 166 (63.5 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 39/128 (30%), Positives = 59/128 (46%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE---QCK-CKQGVGGLKCDRCEP 70
C P G + P C + S C+ + + +C C G G C+RC
Sbjct: 1387 CAPGYYGKVTGSASDCSPCACPRSHPASFSPTCVLEGDADFRCDACVLGYEGQYCERCSS 1446
Query: 71 GYWGLSKISSYAPDIDG-CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNK 129
GY G + + G C +C CS GSV DC++ +G+CVC+PG G +C +C +P
Sbjct: 1447 GYHGNPRA------LGGTCQRCDCSPSGSVHGDCDRGSGQCVCRPGATGLRCEQC-EPRH 1499
Query: 130 KLGPNGCM 137
L + C+
Sbjct: 1500 ILLESDCV 1507
Score = 135 (52.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 46/180 (25%), Positives = 67/180 (37%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQG 59
+G + + C +YG P T CP + N T D C +C G
Sbjct: 718 TGDHCEQCAPGFYGL-PSRGTPGDC-QRCACPLSTTSNNFSPTCHLEAGDEVVCDQCAPG 775
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRE----DCEQMTGRCV-CKP 114
G C+RC GY+G + + C+ C CS G+V C+ +TG C+ C
Sbjct: 776 YSGSWCERCADGYYGNPTVPG-----ESCVPCNCS--GNVDPFEAGHCDSVTGECLKCIG 828
Query: 115 GVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGE---PPVINLQTGVELDCGSGANREDC 171
G+ C C D G C+G+ V +L TG+ DC + C
Sbjct: 829 NTDGAHCERCADGF--YGDAVTAKNCRACECHGKGSISDVCHLDTGL-CDCKPHVTGQQC 885
Score = 129 (50.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 40/131 (30%), Positives = 53/131 (40%)
Query: 1 SGIYLKSCLDSWY-GCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQ 58
+G + C ++ G P + P A C C CN + DAC +T +C C
Sbjct: 1322 AGFSCQDCAPGYHRGKLPQGGSRGPRPLLAPCVP-CNCN---NHSDACDPETGKCLNCSH 1377
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTG----RC-VCK 113
G CD C PGY+G K++ A D C C S S C + G RC C
Sbjct: 1378 STTGEHCDVCAPGYYG--KVTGSASDCSPCA-CPRSHPASFSPTCV-LEGDADFRCDACV 1433
Query: 114 PGVKGSKCNEC 124
G +G C C
Sbjct: 1434 LGYEGQYCERC 1444
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 60/206 (29%), Positives = 77/206 (37%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCK-CKQG 59
+GI +SCL +Y G G C C+ G + I C CK
Sbjct: 669 AGISCESCLPGYYR--------VDGILFGGICQPCECH--GHAAECDIHGV--CSVCKHN 716
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC---SQFGSVREDCEQMTGRCV----C 112
G C++C PG++GL S P D C +C C + + C G V C
Sbjct: 717 TTGDHCEQCAPGFYGLP--SRGTPG-D-CQRCACPLSTTSNNFSPTCHLEAGDEVVCDQC 772
Query: 113 KPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQ-------TGVELDC-GS 164
PG GS C C D G N +PG PCN V + TG L C G+
Sbjct: 773 APGYSGSWCERCADGY--YG-NPTVPGESCVPCNCSGNVDPFEAGHCDSVTGECLKCIGN 829
Query: 165 --GANREDCPSDAYCH-ITQNFARCC 187
GA+ E C Y +T R C
Sbjct: 830 TDGAHCERCADGFYGDAVTAKNCRAC 855
Score = 121 (47.7 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 45/147 (30%), Positives = 61/147 (41%)
Query: 46 ACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG-CLKCGCSQFGSVREDCE 104
A + E C+C QG G+ C+ C PGY+ + I G C C C G E C+
Sbjct: 654 ALATEVEHCECPQGYAGISCESCLPGYYRVDGIL-----FGGICQPCECH--GHAAE-CD 705
Query: 105 QMTGRC-VCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPC--------NGEPPVINLQ 155
+ G C VCK G C +C L G PG + + C N P +L+
Sbjct: 706 -IHGVCSVCKHNTTGDHCEQCAPGFYGLPSRGT-PG-DCQRCACPLSTTSNNFSPTCHLE 762
Query: 156 TGVELDCG------SGANREDCPSDAY 176
G E+ C SG+ E C +D Y
Sbjct: 763 AGDEVVCDQCAPGYSGSWCERC-ADGY 788
Score = 113 (44.8 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 46 ACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQ 105
+C EDT C CK+ V GL+C C G + L +A D GC+ C C FG + + C +
Sbjct: 1063 SCAEDTGTCSCKENVLGLQCSECRAGTYAL-----HADDPLGCIPCFC--FG-LSQACSE 1114
Query: 106 MTG 108
+ G
Sbjct: 1115 LEG 1117
Score = 75 (31.5 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 25/90 (27%), Positives = 35/90 (38%)
Query: 109 RCVCKPGVKGSKCNECLDPNKKLG--PNGCMPGME--VKPC-----NGEPPVINLQTGVE 159
+C+C PG G C +C P G P G G + PC N + +TG
Sbjct: 1314 KCLCPPGTAGFSCQDCA-PGYHRGKLPQGGSRGPRPLLAPCVPCNCNNHSDACDPETGKC 1372
Query: 160 LDCGSGANREDCPSDA---YCHITQNFARC 186
L+C E C A Y +T + + C
Sbjct: 1373 LNCSHSTTGEHCDVCAPGYYGKVTGSASDC 1402
Score = 47 (21.6 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 13/45 (28%), Positives = 17/45 (37%)
Query: 7 SCLDSWYGCCPDNKTLAQGPDNAGCPSTCG-CNKLGSTEDACIED 50
+C +S CCP P +TC CN +D C D
Sbjct: 249 TCGESCSRCCPGYHQQPWRPGTVSAGNTCEKCNCHNKAQD-CYYD 292
>UNIPROTKB|F1LPI5 [details] [associations]
symbol:Lamb3 "Protein Lamb3" species:10116 "Rattus
norvegicus" [GO:0005610 "laminin-5 complex" evidence=IEA]
[GO:0050873 "brown fat cell differentiation" evidence=IEA]
RGD:1562668 GO:GO:0050873 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005610 GeneTree:ENSGT00620000087753
OMA:RSQMEED IPI:IPI00363443 UniGene:Rn.49634
ProteinModelPortal:F1LPI5 Ensembl:ENSRNOT00000008440 NextBio:654049
ArrayExpress:F1LPI5 Uniprot:F1LPI5
Length = 1171
Score = 218 (81.8 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 56/145 (38%), Positives = 72/145 (49%)
Query: 35 CGCNKLGSTEDA-CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C C+ G+ A C T QC CK V G +CD C+PG+ GL+ +A + GC C C
Sbjct: 379 CECDPDGAVPGAPCDRLTGQCVCKDHVQGERCDLCKPGFTGLT----FA-NPQGCHPCDC 433
Query: 94 SQFGSVRED--CEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN-GCMPGMEVKPCNGEPP 150
S G+ R+D CE+ TGRC+C P V G KC++C + KL GC P P N
Sbjct: 434 SILGT-RQDMPCEEETGRCLCLPNVVGPKCDQCAPSHWKLASGRGCEP-CACDPRNSLSS 491
Query: 151 VINLQTGVELDCGSGANREDCPSDA 175
N TG + C G C S A
Sbjct: 492 QCNQFTG-QCPCREGFGGLTCSSAA 515
Score = 178 (67.7 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 35/110 (31%), Positives = 52/110 (47%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P + LA G GC C C+ S C + T QC C++G GGL C
Sbjct: 465 CAPSHWKLASG---RGC-EPCACDPRNSLSSQCNQFTGQCPCREGFGGLTCSSAAIRQ-- 518
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
++ GC C C G+ C++ +GRC+C+PG+ G +C++C
Sbjct: 519 -CPDRTHGDVATGCRACDCDFRGTEGPGCDKTSGRCLCRPGLTGPRCDQC 567
Score = 140 (54.3 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 40/129 (31%), Positives = 57/129 (44%)
Query: 23 AQGPDNAGCPSTCGCNKLGST--EDACIEDTEQ------C-KCKQGVGGLKCDRCEPGYW 73
A+G D C C CN T D + Q C C+ G C+RC+ Y+
Sbjct: 305 AEGQDIHEC-QRCDCNGHSETCHFDPAVFAASQGTSGGVCDNCQDHTEGKNCERCQLHYF 363
Query: 74 GLSKISSYAPDIDGCLKCGCSQFGSVR-EDCEQMTGRCVCKPGVKGSKCNECLDPNKKL- 131
+ AP + C+ C C G+V C+++TG+CVCK V+G +C+ C L
Sbjct: 364 RNRRPG--APIHETCIPCECDPDGAVPGAPCDRLTGQCVCKDHVQGERCDLCKPGFTGLT 421
Query: 132 --GPNGCMP 138
P GC P
Sbjct: 422 FANPQGCHP 430
>UNIPROTKB|F1SAE9 [details] [associations]
symbol:LAMB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0042476
"odontogenesis" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0007566 "embryo implantation" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] GO:GO:0048471 GO:GO:0005615 GO:GO:0016477
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0042476 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0005201 GO:GO:0043208 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005606
GO:GO:0043259 GeneTree:ENSGT00620000087753 InterPro:IPR013015
PROSITE:PS51116 OMA:NTWQLAS EMBL:CU929844
Ensembl:ENSSSCT00000016825 Uniprot:F1SAE9
Length = 1799
Score = 210 (79.0 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 40/99 (40%), Positives = 55/99 (55%)
Query: 27 DNAGCPSTCGCNKLGSTE--DACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
D GC S C CN LG+ + C +T C CK+ V G CD+C P +WGLS D
Sbjct: 464 DPFGCKS-CACNPLGTIPGGNPCDSETGYCYCKRLVTGQHCDQCLPEHWGLSN------D 516
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
+DGC C C G++ C +G+C+C+P + G +CNE
Sbjct: 517 LDGCRPCDCDLGGALNNSCSAESGQCLCRPHMIGRQCNE 555
Score = 202 (76.2 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 43/124 (34%), Positives = 59/124 (47%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P+ LA G GC C C+ S +C E T QC+C G GG C C+ +WG
Sbjct: 1081 CAPNTWQLASG---TGC-EPCNCDAAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWG 1136
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN 134
P ++ C C C G C+Q TG+CVC GV+G +C++C + P+
Sbjct: 1137 -------DPSVE-CRACDCDPRGIETPQCDQSTGQCVCVEGVEGPRCDKCTRGYSGVFPD 1188
Query: 135 GCMP 138
C P
Sbjct: 1189 -CTP 1191
Score = 198 (74.8 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 51/145 (35%), Positives = 67/145 (46%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ GS C + QC+C+ V G KCDRC PG +G + P+ GC C C
Sbjct: 786 CECDPQGSLSSVCDPNGGQCQCRPNVVGRKCDRCAPGTFG------FGPN--GCKPCECH 837
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINL 154
GSV C+ +TG+C C GV +C+ CL P P+ C P CNG +
Sbjct: 838 LQGSVNAFCDPVTGQCHCFQGVYARQCDRCL-PGYWGFPS-CQPCQ----CNGHAEDCDS 891
Query: 155 QTGVELDCG---SGANREDCPSDAY 176
TG C +G N E C + Y
Sbjct: 892 VTGECSSCQDYTTGHNCERCLAGYY 916
Score = 176 (67.0 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 44/112 (39%), Positives = 51/112 (45%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P T GP+ GC C C+ GS C T QC C QGV +CDRC PGYWG
Sbjct: 819 CAPG--TFGFGPN--GC-KPCECHLQGSVNAFCDPVTGQCHCFQGVYARQCDRCLPGYWG 873
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNECL 125
P C C C+ G EDC+ +TG C C+ G C CL
Sbjct: 874 F-------PS---CQPCQCN--GHA-EDCDSVTGECSSCQDYTTGHNCERCL 912
Score = 176 (67.0 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 42/125 (33%), Positives = 55/125 (44%)
Query: 35 CGCNKLGSTED-------ACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
C CN LG+ ++ C + T QC C V G CDRC P W L+ + G
Sbjct: 1041 CVCNYLGTVQEHCNGSDCQCDKTTGQCLCLPNVIGQNCDRCAPNTWQLASGT-------G 1093
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECL-----DPNKKLGPNGCMP-GME 141
C C C S C + TG+C C PG G C+EC DP+ + C P G+E
Sbjct: 1094 CEPCNCDAAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPSVECRACDCDPRGIE 1153
Query: 142 VKPCN 146
C+
Sbjct: 1154 TPQCD 1158
Score = 160 (61.4 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 34/90 (37%), Positives = 47/90 (52%)
Query: 53 QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVR--EDCEQMTGRC 110
QC+CK V G CD C+ G++GL+ A D GC C C+ G++ C+ TG C
Sbjct: 438 QCRCKLHVEGEHCDICKEGFYGLT-----AEDPFGCKSCACNPLGTIPGGNPCDSETGYC 492
Query: 111 VCKPGVKGSKCNECLDPNKKLGPN--GCMP 138
CK V G C++CL + L + GC P
Sbjct: 493 YCKRLVTGQHCDQCLPEHWGLSNDLDGCRP 522
Score = 160 (61.4 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 45/153 (29%), Positives = 67/153 (43%)
Query: 30 GCPSTCGCN-KLGSTE-DACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
G C C+ + +T+ +AC ++T +C KC G+ C C GY+G + D
Sbjct: 984 GTCQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGVHCQLCRLGYYG----DALQQD-- 1037
Query: 87 GCLKCGCSQFGSVRE-------DCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN-GCMP 138
C KC C+ G+V+E C++ TG+C+C P V G C+ C +L GC P
Sbjct: 1038 -CRKCVCNYLGTVQEHCNGSDCQCDKTTGQCLCLPNVIGQNCDRCAPNTWQLASGTGCEP 1096
Query: 139 GMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
+ P N TG + C G C
Sbjct: 1097 -CNCDAAHSFGPSCNEFTG-QCQCMPGFGGRTC 1127
Score = 132 (51.5 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 40/110 (36%), Positives = 49/110 (44%)
Query: 26 PDNAGCPST--CGCNKLGSTEDACIEDTEQCK-CKQGVGGLKCDRCEPGYWGLSKISSYA 82
P G PS C CN G ED C T +C C+ G C+RC GY+G + I S
Sbjct: 869 PGYWGFPSCQPCQCN--GHAED-CDSVTGECSSCQDYTTGHNCERCLAGYYGDAIIGSG- 924
Query: 83 PDIDGCLKCGCS-------QFGS-VREDCEQMTGRCVCKPGVKGSKCNEC 124
D C C C QF S +D + CVC PG GS+C +C
Sbjct: 925 ---DHCRPCPCPDGPESGRQFASSCYQDPVTLQLACVCNPGYIGSRCEDC 971
Score = 122 (48.0 bits), Expect = 6.6e-10, Sum P(3) = 6.6e-10
Identities = 21/50 (42%), Positives = 26/50 (52%)
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP 138
L C C GS+ C+ G+C C+P V G KC+ C GPNGC P
Sbjct: 784 LACECDPQGSLSSVCDPNGGQCQCRPNVVGRKCDRCAPGTFGFGPNGCKP 833
Score = 86 (35.3 bits), Expect = 6.6e-10, Sum P(3) = 6.6e-10
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C P++ L+ D GC C C+ G+ ++C ++ QC C+ + G +C+ E G++
Sbjct: 506 CLPEHWGLSNDLD--GC-RPCDCDLGGALNNSCSAESGQCLCRPHMIGRQCNEVESGFY 561
Score = 39 (18.8 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 147 GEPPVINLQTGVELDCGS--GAN--REDCPSDAYCHITQNFARC 186
G+ ++L T EL CG+ GA+ +C C + +C
Sbjct: 1396 GKLQSLDLSTAAELTCGTPPGASCSETEC-GGPNCRTDEGQKKC 1438
>UNIPROTKB|P11047 [details] [associations]
symbol:LAMC1 "Laminin subunit gamma-1" species:9606 "Homo
sapiens" [GO:0043208 "glycosphingolipid binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=NAS;TAS] [GO:0005615
"extracellular space" evidence=NAS] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0007492 "endoderm development" evidence=TAS]
[GO:0016477 "cell migration" evidence=IMP] [GO:0022617
"extracellular matrix disassembly" evidence=IMP] [GO:0006461
"protein complex assembly" evidence=IDA] [GO:0031581 "hemidesmosome
assembly" evidence=IMP] [GO:0005201 "extracellular matrix
structural constituent" evidence=IMP] [GO:0007155 "cell adhesion"
evidence=IDA] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS] [GO:0031012
"extracellular matrix" evidence=ISS;IDA] [GO:0043260 "laminin-11
complex" evidence=TAS] [GO:0043259 "laminin-10 complex"
evidence=TAS] [GO:0034446 "substrate adhesion-dependent cell
spreading" evidence=IDA] Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0007411 GO:GO:0005615 GO:GO:0016477
GO:GO:0006461 GO:GO:0070062 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0007492
DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031 GO:GO:0050679
GO:GO:0031581 DrugBank:DB00015 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
HOGENOM:HOG000019301 GO:GO:0005606 GO:GO:0043259 GO:GO:0043260
CleanEx:HS_LAMB2 CTD:3915 HOVERGEN:HBG100808 KO:K05635 OMA:EATDYPW
OrthoDB:EOG49GKFS EMBL:J03202 EMBL:M55210 EMBL:M55217 EMBL:M55201
EMBL:M55211 EMBL:M55212 EMBL:M55213 EMBL:M55214 EMBL:M55215
EMBL:M55216 EMBL:M55192 EMBL:M55193 EMBL:M55194 EMBL:M55195
EMBL:M55196 EMBL:M55197 EMBL:M55198 EMBL:M55199 EMBL:M55200
EMBL:M55202 EMBL:M55203 EMBL:M55204 EMBL:M55205 EMBL:M55206
EMBL:M55207 EMBL:M55208 EMBL:M55209 EMBL:AL354953 EMBL:AL450304
EMBL:X13939 EMBL:M27654 IPI:IPI00298281 PIR:S13548
RefSeq:NP_002284.3 UniGene:Hs.609663 ProteinModelPortal:P11047
SMR:P11047 IntAct:P11047 MINT:MINT-1184520 STRING:P11047
PhosphoSite:P11047 DMDM:224471885 PaxDb:P11047 PRIDE:P11047
Ensembl:ENST00000258341 GeneID:3915 KEGG:hsa:3915 UCSC:uc001gpy.4
GeneCards:GC01P182992 H-InvDB:HIX0001405 HGNC:HGNC:6492
HPA:CAB004486 HPA:HPA001908 HPA:HPA001909 MIM:150290
neXtProt:NX_P11047 PharmGKB:PA30280 InParanoid:P11047
PhylomeDB:P11047 ChiTaRS:LAMC1 GenomeRNAi:3915 NextBio:15381
Bgee:P11047 CleanEx:HS_LAMC1 Genevestigator:P11047
GermOnline:ENSG00000135862 Uniprot:P11047
Length = 1609
Score = 219 (82.2 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 58/183 (31%), Positives = 82/183 (44%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGST--EDACIEDTEQCKCKQ 58
+G Y C D ++G LA P + C + C CN G+ + +C T QC+C
Sbjct: 857 AGFYCDRCKDGFFG-----NPLAPNPADK-CKA-CNCNLYGTMKQQSSCNPVTGQCECLP 909
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
V G C C+PG++ L S GC +C C GS C+ TG+C C+PG+ G
Sbjct: 910 HVTGQDCGACDPGFYNLQ--SG-----QGCERCDCHALGSTNGQCDIRTGQCECQPGITG 962
Query: 119 SKCNECLDPNKKLGPNGCMPGMEVKPCNGEPP-VINLQTGVE--LDCGSG--ANREDCPS 173
C C + GP GC KPC+ P ++LQ + +C G NR D
Sbjct: 963 QHCERCEVNHFGFGPEGC------KPCDCHPEGSLSLQCKDDGRCECREGFVGNRCDQCE 1016
Query: 174 DAY 176
+ Y
Sbjct: 1017 ENY 1019
Score = 165 (63.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 56/198 (28%), Positives = 81/198 (40%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE--------- 52
G+ + CL ++ P + A+ P C CN G +++ C D E
Sbjct: 313 GVDCEKCLP-FFNDRPWRRATAESASEC-LP--CDCN--GRSQE-CYFDPELYRSTGHGG 365
Query: 53 QC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV 111
C C+ G C+RC ++ L + + C C CS GS+ C+ GRC
Sbjct: 366 HCTNCQDNTDGAHCERCRENFFRLG-------NNEACSSCHCSPVGSLSTQCDSY-GRCS 417
Query: 112 CKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTG--VELDCGSGANRE 169
CKPGV G KC+ C L GC P P +G N++TG V D G N E
Sbjct: 418 CKPGVMGDKCDRCQPGFHSLTEAGCRP-CSCDP-SGSIDECNIETGRCVCKDNVEGFNCE 475
Query: 170 DCPSDAYCHITQNFARCC 187
C + ++ + R C
Sbjct: 476 RC-KPGFFNLESSNPRGC 492
Score = 162 (62.1 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 50/160 (31%), Positives = 75/160 (46%)
Query: 22 LAQGPDNAGCPSTCG-CNKLGSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKIS 79
L Q DN P+ G CN+L T +C KC G CDRC+ G++G +
Sbjct: 827 LCQCSDNID-PNAVGNCNRL----------TGECLKCIYNTAGFYCDRCKDGFFG----N 871
Query: 80 SYAPD-IDGCLKCGCSQFGSVRED--CEQMTGRCVCKPGVKGSKCNECLDP---NKKLGP 133
AP+ D C C C+ +G++++ C +TG+C C P V G C C DP N + G
Sbjct: 872 PLAPNPADKCKACNCNLYGTMKQQSSCNPVTGQCECLPHVTGQDCGAC-DPGFYNLQSG- 929
Query: 134 NGC--MPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
GC + NG+ +++TG + +C G + C
Sbjct: 930 QGCERCDCHALGSTNGQ---CDIRTG-QCECQPGITGQHC 965
Score = 134 (52.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 43/154 (27%), Positives = 65/154 (42%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ--C-KCK 57
+G + + C D +YG + T D CP C G + A + T++ C C
Sbjct: 747 AGPHCEKCSDGYYG----DSTAGTSSDCQPCP--CP----GGSSCAVVPKTKEVVCTNCP 796
Query: 58 QGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQF--GSVREDCEQMTGRCV-CKP 114
G G +C+ C+ GY+G + P + C C CS + +C ++TG C+ C
Sbjct: 797 TGTTGKRCELCDDGYFG-DPLGRNGP-VRLCRLCQCSDNIDPNAVGNCNRLTGECLKCIY 854
Query: 115 GVKGSKCNECLDP--NKKLGPNGCMPGMEVKPCN 146
G C+ C D L PN P + K CN
Sbjct: 855 NTAGFYCDRCKDGFFGNPLAPN---PADKCKACN 885
Score = 127 (49.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 32/83 (38%), Positives = 40/83 (48%)
Query: 29 AGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
AGC C C+ GS ++ IE T +C CK V G C+RC+PG++ L S P GC
Sbjct: 440 AGC-RPCSCDPSGSIDECNIE-TGRCVCKDNVEGFNCERCKPGFFNLE---SSNPR--GC 492
Query: 89 LKCGCSQFGSVREDCEQMTGRCV 111
C C SV C G V
Sbjct: 493 TPCFCFGHSSV---CTNAVGYSV 512
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 35/131 (26%), Positives = 50/131 (38%)
Query: 52 EQCKCKQGVGGLKCDRCEPGYWGLS-KISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRC 110
E C C G GG C+ C GY + + Y+P C+ C C+ E C+ TG C
Sbjct: 688 ESCTCPVGYGGQFCEMCLSGYRRETPNLGPYSP----CVLCACNGHS---ETCDPETGVC 740
Query: 111 VCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVEL---DCGSGAN 167
C+ G C +C D G + PC G + E+ +C +G
Sbjct: 741 NCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPCPCPGGSSCAVVPKTKEVVCTNCPTGTT 800
Query: 168 REDCP--SDAY 176
+ C D Y
Sbjct: 801 GKRCELCDDGY 811
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 40/136 (29%), Positives = 52/136 (38%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C CN G +E C +T C C+ G C++C GY+G S A C C C
Sbjct: 724 CACN--GHSE-TCDPETGVCNCRDNTAGPHCEKCSDGYYG----DSTAGTSSDCQPCPCP 776
Query: 95 QFGSVREDCEQMTGRCV-CKPGVKGSKCNECLDP--NKKLGPNGCMPGMEVKPC--NGEP 149
S + C C G G +C C D LG NG + + C N +P
Sbjct: 777 GGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCSDNIDP 836
Query: 150 PVI---NLQTGVELDC 162
+ N TG L C
Sbjct: 837 NAVGNCNRLTGECLKC 852
>UNIPROTKB|F1PFM5 [details] [associations]
symbol:LAMB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050873 "brown fat cell differentiation"
evidence=IEA] [GO:0005610 "laminin-5 complex" evidence=IEA]
GO:GO:0050873 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0005610 GeneTree:ENSGT00620000087753 OMA:RSQMEED
EMBL:AAEX03005067 EMBL:AAEX03005068 Ensembl:ENSCAFT00000018923
Uniprot:F1PFM5
Length = 1171
Score = 217 (81.4 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 53/144 (36%), Positives = 73/144 (50%)
Query: 35 CGCNKLGSTEDA-CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C C+ G+ C T QC CK+ V G +CD C+PG+ GL+ YA + GC +C C
Sbjct: 379 CECDPDGAVPGVPCDPVTGQCVCKEHVQGERCDLCKPGFTGLT----YA-NPQGCHRCDC 433
Query: 94 SQFGSVRE-DCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN-GCMPGMEVKPCNGEPPV 151
+ GS R+ C++ TG+C+C P V G KC++C + KL GC P P N P
Sbjct: 434 NILGSRRDLPCDEETGQCLCLPHVVGPKCDQCAPYHWKLASGRGCEP-CACDPHNALSPQ 492
Query: 152 INLQTGVELDCGSGANREDCPSDA 175
N TG + C G C + A
Sbjct: 493 CNQFTG-QCPCREGFGGLTCNAAA 515
Score = 175 (66.7 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 35/110 (31%), Positives = 53/110 (48%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P + LA G GC C C+ + C + T QC C++G GGL C+
Sbjct: 465 CAPYHWKLASG---RGC-EPCACDPHNALSPQCNQFTGQCPCREGFGGLTCNAAALRQ-- 518
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
+Y GC C C G+ C++ +GRC+C+PG+ G +C++C
Sbjct: 519 -CPDRTYGDAGSGCRACDCDFRGTEGPGCDKASGRCLCRPGLTGPRCDQC 567
Score = 125 (49.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 28/85 (32%), Positives = 42/85 (49%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRE-DCEQMTGRCVCKP 114
C+ G C+RC+ Y+ + AP + C+ C C G+V C+ +TG+CVCK
Sbjct: 346 CRDHTEGKNCERCQLHYFRNRRPG--APIQETCIPCECDPDGAVPGVPCDPVTGQCVCKE 403
Query: 115 GVKGSKCNECLDPNKKL---GPNGC 136
V+G +C+ C L P GC
Sbjct: 404 HVQGERCDLCKPGFTGLTYANPQGC 428
>UNIPROTKB|O75445 [details] [associations]
symbol:USH2A "Usherin" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0050896
"response to stimulus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0050953 "sensory perception of light stimulus"
evidence=IMP] [GO:0005518 "collagen binding" evidence=IDA]
[GO:0007605 "sensory perception of sound" evidence=IMP] [GO:0048496
"maintenance of organ identity" evidence=IMP] [GO:0045494
"photoreceptor cell maintenance" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0035315 "hair cell differentiation" evidence=ISS]
[GO:0060113 "inner ear receptor cell differentiation" evidence=ISS]
[GO:0017022 "myosin binding" evidence=ISS] [GO:0002142 "stereocilia
ankle link complex" evidence=ISS] [GO:0016324 "apical plasma
membrane" evidence=ISS] [GO:0032421 "stereocilium bundle"
evidence=ISS] [GO:0060171 "stereocilium membrane" evidence=ISS]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
GO:GO:0016021 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016324 SUPFAM:SSF49265 Orphanet:791 GO:GO:0045494
GO:GO:0050896 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005518
GO:GO:0007605 GO:GO:0017022 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604 GO:GO:0060113
Pfam:PF02210 GO:GO:0035315 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 EMBL:AL445650 Orphanet:231178
GO:GO:0002142 GO:GO:0048496 EMBL:AC092799 GO:GO:0060171
InterPro:IPR006558 SMART:SM00560 EMBL:AF055580 EMBL:AF091889
EMBL:AF091873 EMBL:AF091875 EMBL:AF091876 EMBL:AF091874
EMBL:AF091877 EMBL:AF091879 EMBL:AF091881 EMBL:AF091883
EMBL:AF091888 EMBL:AF091887 EMBL:AF091886 EMBL:AF091885
EMBL:AF091884 EMBL:AF091882 EMBL:AF091880 EMBL:AF091878
EMBL:AY481573 EMBL:AC138024 EMBL:AL358858 EMBL:AC093581
EMBL:AC119429 EMBL:AL139259 EMBL:AL358452 EMBL:AL513305
IPI:IPI00289540 IPI:IPI00410150 IPI:IPI00741527 RefSeq:NP_009054.5
RefSeq:NP_996816.2 UniGene:Hs.655974 ProteinModelPortal:O75445
STRING:O75445 PhosphoSite:O75445 PaxDb:O75445 PRIDE:O75445
Ensembl:ENST00000307340 Ensembl:ENST00000366942
Ensembl:ENST00000366943 GeneID:7399 KEGG:hsa:7399 UCSC:uc001hku.1
UCSC:uc001hkv.3 CTD:7399 GeneCards:GC01M215796 H-InvDB:HIX0028527
HGNC:HGNC:12601 MIM:276901 MIM:608400 MIM:613809 neXtProt:NX_O75445
PharmGKB:PA37228 eggNOG:NOG245744 HOGENOM:HOG000124780
HOVERGEN:HBG094138 OMA:EIRIQAC OrthoDB:EOG4B5P57 GenomeRNAi:7399
NextBio:28962 Bgee:O75445 CleanEx:HS_USH2A Genevestigator:O75445
GermOnline:ENSG00000042781 InterPro:IPR026915
PANTHER:PTHR10574:SF53 Uniprot:O75445
Length = 5202
Score = 224 (83.9 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 56/169 (33%), Positives = 77/169 (45%)
Query: 27 DNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
++ GC C CN GS C + QC+CK+ GL+CD C ++GL D+
Sbjct: 740 NDVGC-EPCQCNLHGSVNKFCNPHSGQCECKKEAKGLQCDTCRENFYGL--------DVT 790
Query: 87 GCLKCGCSQFGSVRED-CEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNG---CMPGM-- 140
C C C GS+ C TG+C+CKP V+G +CN+CL+ N L N C+P
Sbjct: 791 NCKACDCDTAGSLPGTVCNAKTGQCICKPNVEGRQCNKCLEGNFYLRQNNSFLCLPCNCD 850
Query: 141 EVKPCNGEPPVINLQTGVELDC--G-SGANREDCPSDAYCHITQNFARC 186
+ NG + N TG + C G +G C Y NF C
Sbjct: 851 KTGTINGSL-LCNKSTG-QCPCKLGVTGLRCNQCEPHRYNLTIDNFQHC 897
Score = 199 (75.1 bits), Expect = 8.9e-14, P = 8.9e-14
Identities = 43/127 (33%), Positives = 59/127 (46%)
Query: 26 PDNA-GCPSTCGCNKLGSTEDACIEDTEQCKCKQG-VGGLKCDRCEPGYWGLSKISSYAP 83
P NA GC C C+ G+ C T QC C+ + G +CD+C+ Y+G + P
Sbjct: 942 PGNATGC-LPCSCHTTGAVNHICNSLTGQCVCQDASIAGQRCDQCKDHYFG------FDP 994
Query: 84 DIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVK 143
C C C G++ E C +TG+C CK V GSKC+ C+ L N + G
Sbjct: 995 QTGRCQPCNCHLSGALNETCHLVTGQCFCKQFVTGSKCDACVPSASHLDVNNLL-GCSKT 1053
Query: 144 PCNGEPP 150
P PP
Sbjct: 1054 PFQQPPP 1060
Score = 199 (75.1 bits), Expect = 8.9e-14, P = 8.9e-14
Identities = 54/180 (30%), Positives = 80/180 (44%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPGY 72
C N L Q +N+ C C+K G+ + C + T QC CK GV GL+C++CEP
Sbjct: 829 CLEGNFYLRQ--NNSFLCLPCNCDKTGTINGSLLCNKSTGQCPCKLGVTGLRCNQCEPHR 886
Query: 73 WGLSKISSYAPDIDGCLKCGCSQFGSVRED-CEQMTGRCVCKPGVKGSKCNECLDPNKKL 131
+ L+ I ++ C C C G++ C+ ++G+C+C P +G +CN+C P +
Sbjct: 887 YNLT-IDNF----QHCQMCECDSLGTLPGTICDPISGQCLCVPNRQGRRCNQC-QPGFYI 940
Query: 132 GPN---GCMPGMEVKPCNGEPPVINLQTG--VELDCGSGANREDCPSDAYCHITQNFARC 186
P GC+P + N TG V D R D D Y RC
Sbjct: 941 SPGNATGCLP-CSCHTTGAVNHICNSLTGQCVCQDASIAGQRCDQCKDHYFGFDPQTGRC 999
Score = 197 (74.4 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 51/166 (30%), Positives = 74/166 (44%)
Query: 27 DNAGCPSTCGCNKLGSTED--ACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
D GC S C CN G+ + C +++ QCKCK V GL+CD C G+ L + D
Sbjct: 687 DPDGC-SPCNCNTSGTVDGDITCHQNSGQCKCKANVIGLRCDHCNFGFKFLRSFN----D 741
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKP 144
+ GC C C+ GSV + C +G+C CK KG +C+ C + L C +
Sbjct: 742 V-GCEPCQCNLHGSVNKFCNPHSGQCECKKEAKGLQCDTCRENFYGLDVTNCK-ACDCDT 799
Query: 145 CNGEP-PVINLQTGVELDCGSGANREDCPS--DAYCHITQNFARCC 187
P V N +TG + C C + ++ QN + C
Sbjct: 800 AGSLPGTVCNAKTG-QCICKPNVEGRQCNKCLEGNFYLRQNNSFLC 844
Score = 178 (67.7 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 45/145 (31%), Positives = 70/145 (48%)
Query: 35 CGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
C C+ +G+ + C + QC CK+ V G +C++C+ G++ L ++ D DGC C
Sbjct: 641 CDCDTVGTRNGSILCDQIGGQCNCKRHVSGRQCNQCQNGFYNLQEL-----DPDGCSPCN 695
Query: 93 CSQFGSVRED--CEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPP 150
C+ G+V D C Q +G+C CK V G +C+ C K L + G E PC
Sbjct: 696 CNTSGTVDGDITCHQNSGQCKCKANVIGLRCDHCNFGFKFLRSFNDV-GCE--PCQ---- 748
Query: 151 VINLQTGVELDCGSGANREDCPSDA 175
NL V C + + +C +A
Sbjct: 749 -CNLHGSVNKFCNPHSGQCECKKEA 772
Score = 127 (49.8 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 27/88 (30%), Positives = 45/88 (51%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED--CEQMTGRCVCK 113
C+ G C+ C+ ++ ++ + ID C C C G+ C+Q+ G+C CK
Sbjct: 608 CEHNTTGRNCELCKDYFF--RQVGADPSAIDVCKPCDCDTVGTRNGSILCDQIGGQCNCK 665
Query: 114 PGVKGSKCNECLDP--N-KKLGPNGCMP 138
V G +CN+C + N ++L P+GC P
Sbjct: 666 RHVSGRQCNQCQNGFYNLQELDPDGCSP 693
>WB|WBGene00001328 [details] [associations]
symbol:epi-1 species:6239 "Caenorhabditis elegans"
[GO:0005604 "basement membrane" evidence=IEA;IDA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007414 "axonal
defasciculation" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0071711 "basement membrane organization"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0009408 "response to heat" evidence=IMP]
[GO:0010950 "positive regulation of endopeptidase activity"
evidence=IMP] [GO:0051788 "response to misfolded protein"
evidence=IMP] InterPro:IPR010307 Pfam:PF06009 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0006915
GO:GO:0001764 GO:GO:0002119 GO:GO:0010171 GO:GO:0040017
GO:GO:0007155 GO:GO:0009408 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042127 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0040035 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0010950
GO:GO:0005604 GO:GO:0071711 GO:GO:0040027 Pfam:PF02210
GO:GO:0051788 EMBL:Z70286 UniGene:Cel.18380 GeneID:177956
KEGG:cel:CELE_K08C7.3 CTD:177956 GeneTree:ENSGT00700000104140
NextBio:899114 GO:GO:0007414 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 EMBL:AB001074
EMBL:AB016806 PIR:T37316 RefSeq:NP_001023281.1 HSSP:Q92956
ProteinModelPortal:G5EEV6 SMR:G5EEV6 PRIDE:G5EEV6
EnsemblMetazoa:K08C7.3a.1 EnsemblMetazoa:K08C7.3a.2
WormBase:K08C7.3a OMA:CHHALLD Uniprot:G5EEV6
Length = 3704
Score = 213 (80.0 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 58/164 (35%), Positives = 74/164 (45%)
Query: 20 KTLAQGPDN--AGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSK 77
+T A G N AGC C C+ GS C T QC+CK GL CD+C+ GY+G
Sbjct: 503 ETCADGYTNVTAGCVE-CVCDATGSEHGNCSASTGQCECKPAYAGLSCDKCQVGYFG--- 558
Query: 78 ISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD------PN-KK 130
D C C C G+ C+Q TG+C+CK G G KC+ C D PN K
Sbjct: 559 --------DDCKFCNCDPMGTEGGVCDQTTGQCLCKEGFAGDKCDRC-DIAFYGYPNCKA 609
Query: 131 LGPNGC-MPGMEVKPCNGEPPVINLQTGVELD-CGSGA-NREDC 171
+G + E +G+ P TG D C +G N DC
Sbjct: 610 CACDGAGITSPECDATSGQCPCNGNFTGRTCDKCAAGFYNYPDC 653
Score = 195 (73.7 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 51/158 (32%), Positives = 69/158 (43%)
Query: 33 STCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
S+C C++ GS C + C+CK V G CDRC+P +WG SK GC CG
Sbjct: 1988 SSCECSQCGS--QYCDNKSGGCECKINVEGDSCDRCKPDHWGFSKCQG----CQGC-HCG 2040
Query: 93 CSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP-GMEVKPCNGEPPV 151
+ F + C G+C C+PG G +C C G +GC E G V
Sbjct: 2041 TAAFNT---QCNVENGQCTCRPGATGMRCEHCEHGYWNYGEHGCDKCDCEADLSMGT--V 2095
Query: 152 INLQTGVELDCGSGANREDCPS--DAYCHI-TQNFARC 186
+++TG + C GA C +Y I T RC
Sbjct: 2096 CDVRTG-QCHCQEGATGSRCDQCLPSYLRIPTYGCRRC 2132
Score = 189 (71.6 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 40/117 (34%), Positives = 54/117 (46%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
CL + G D A G +A C CN G+ D C+ + QC CK G GG C+
Sbjct: 447 CLPRFVG--EDCDQCASGYYDAPKCKPCECNVNGTIGDVCLPEDGQCPCKAGFGGTFCET 504
Query: 68 CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C GY ++ GC++C C GS +C TG+C CKP G C++C
Sbjct: 505 CADGYTNVTA---------GCVECVCDATGSEHGNCSASTGQCECKPAYAGLSCDKC 552
Score = 185 (70.2 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 41/127 (32%), Positives = 61/127 (48%)
Query: 10 DSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCE 69
DS C PD+ ++ GC CG +T+ C + QC C+ G G++C+ CE
Sbjct: 2016 DSCDRCKPDHWGFSKCQGCQGCH--CGTAAF-NTQ--CNVENGQCTCRPGATGMRCEHCE 2070
Query: 70 PGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNK 129
GYW + GC KC C S+ C+ TG+C C+ G GS+C++CL
Sbjct: 2071 HGYWNYGE--------HGCDKCDCEADLSMGTVCDVRTGQCHCQEGATGSRCDQCLPSYL 2122
Query: 130 KLGPNGC 136
++ GC
Sbjct: 2123 RIPTYGC 2129
Score = 183 (69.5 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 40/118 (33%), Positives = 58/118 (49%)
Query: 35 CGCNKLGSTED--AC--IEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLK 90
C CN G T D C + E C C++ V G CD+C+P +W L Y + DGC
Sbjct: 701 CNCNPSGVTRDFQGCDKVSPGELCSCRKHVTGRICDQCKPTFWDLQ----YHHE-DGCRS 755
Query: 91 CGCSQFGSVR--EDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCN 146
C C+ G++ C+ TG+C+CK G +C++C D +L M G E C+
Sbjct: 756 CDCNVNGTISGLNTCDLKTGQCMCKKNADGRRCDQCADGFYRLNSYNQM-GCESCHCD 812
Score = 178 (67.7 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 48/146 (32%), Positives = 66/146 (45%)
Query: 28 NAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
NA S C C GS C + QCKCK GV G +C+RC PGY+ P+
Sbjct: 1409 NAAALS-CDCVAQGSESFQCEQYGGQCKCKPGVIGRRCERCAPGYYNF-------PE--- 1457
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN-GCMP-GMEVKPC 145
C+KC C+ G + C++ TG+C C P V+G C+ C+ P GC G +
Sbjct: 1458 CIKCQCNA-G---QQCDERTGQCFCPPHVEGQTCDRCVSNAFGYDPLIGCQKCGCHPQGS 1513
Query: 146 NGEPPVINLQTGVELDCGSGANREDC 171
G V + ++G L C C
Sbjct: 1514 EGGNLVCDPESGQCL-CRESMGGRQC 1538
Score = 177 (67.4 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 34/99 (34%), Positives = 57/99 (57%)
Query: 30 GCPSTCGCNKLGSTE--DACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
GC S C CN G+ + C T QC CK+ G +CD+C G++ +++SY + G
Sbjct: 752 GCRS-CDCNVNGTISGLNTCDLKTGQCMCKKNADGRRCDQCADGFY---RLNSY--NQMG 805
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
C C C G++R +C+ +G+C C+P V G +C++ ++
Sbjct: 806 CESCHCDIGGALRAECDITSGQCKCRPRVTGLRCDQPIE 844
Score = 170 (64.9 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 38/113 (33%), Positives = 53/113 (46%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTE--QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
GC CGC+ GS + D E QC C++ +GG +CDRC G++G P
Sbjct: 1502 GCQK-CGCHPQGSEGGNLVCDPESGQCLCRESMGGRQCDRCLAGFYGF-------PH--- 1550
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLG---PNGCM 137
C C C++ G+ E C+ +C CK V G +C C L P GC+
Sbjct: 1551 CYGCSCNRAGTTEEICDATNAQCKCKENVYGGRCEACKAGTFDLSAENPLGCV 1603
Score = 140 (54.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 43/146 (29%), Positives = 60/146 (41%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ T AC E+T +C+C G CD+C GY+ K C C C+
Sbjct: 427 CDCDPDKHT-GACAEETGKCECLPRFVGEDCDQCASGYYDAPK----------CKPCECN 475
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLD--PNKKLGPNGCM---PGMEVKPCN--- 146
G++ + C G+C CK G G+ C C D N G C+ G E C+
Sbjct: 476 VNGTIGDVCLPEDGQCPCKAGFGGTFCETCADGYTNVTAGCVECVCDATGSEHGNCSAST 535
Query: 147 GEPPVINLQTGVELD-CGSGANREDC 171
G+ G+ D C G +DC
Sbjct: 536 GQCECKPAYAGLSCDKCQVGYFGDDC 561
Score = 135 (52.6 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 42/145 (28%), Positives = 62/145 (42%)
Query: 33 STCGCNKLGSTEDA--CIEDTEQCK-CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
S C CN + D+ C ++ C C+Q G C+ C ++G +++ C
Sbjct: 1935 SPCQCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYG-DAVTA-----KNCS 1988
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEP 149
C CSQ GS + C+ +G C CK V+G C+ C P+ G + C G + C+
Sbjct: 1989 SCECSQCGS--QYCDNKSGGCECKINVEGDSCDRC-KPDH-WGFSKCQ-GCQ--GCHCGT 2041
Query: 150 PVINLQTGVE---LDCGSGANREDC 171
N Q VE C GA C
Sbjct: 2042 AAFNTQCNVENGQCTCRPGATGMRC 2066
Score = 134 (52.2 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 28/69 (40%), Positives = 39/69 (56%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C CN+ G+TE+ C QCKCK+ V G +C+ C+ G + LS A + GC+ C C
Sbjct: 1554 CSCNRAGTTEEICDATNAQCKCKENVYGGRCEACKAGTFDLS-----AENPLGCVNCFC- 1607
Query: 95 QFGSVREDC 103
FG V + C
Sbjct: 1608 -FG-VTDSC 1614
Score = 122 (48.0 bits), Expect = 0.00021, P = 0.00021
Identities = 35/129 (27%), Positives = 52/129 (40%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCG-CNKLGSTEDACIE-DTEQCKCKQ 58
+G + + C + YG N T D C N + D E QC CK
Sbjct: 1854 NGDHCEFCNEGHYG----NATNGSPYDCMACACPFAPTNNFAKSCDVSEEGQLLQCNCKP 1909
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED--CEQMTGRC-VCKPG 115
G G +CDRC G++G +IS + C C C+ ++ + C +G C +C+
Sbjct: 1910 GYTGDRCDRCASGFFGHPQISG-----ESCSPCQCNGNNNLTDSRSCHPNSGDCYLCEQN 1964
Query: 116 VKGSKCNEC 124
G C C
Sbjct: 1965 TDGRHCESC 1973
Score = 121 (47.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 41/136 (30%), Positives = 60/136 (44%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLA-QGPDN--AGC---PSTCGCNKL--GSTEDACIEDTE 52
+GI C D+ G CP N + D AG P GC L G+ C +
Sbjct: 615 AGITSPEC-DATSGQCPCNGNFTGRTCDKCAAGFYNYPDCRGCECLLSGAKGQTC-DSNG 672
Query: 53 QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRE--DCEQMT-GR 109
QC CK G +CDRC+P ++ P C +C C+ G R+ C++++ G
Sbjct: 673 QCYCKGNFEGERCDRCKPNFYNF-------PI---CEECNCNPSGVTRDFQGCDKVSPGE 722
Query: 110 -CVCKPGVKGSKCNEC 124
C C+ V G C++C
Sbjct: 723 LCSCRKHVTGRICDQC 738
Score = 120 (47.3 bits), Expect = 0.00039, P = 0.00039
Identities = 35/140 (25%), Positives = 55/140 (39%)
Query: 54 CK-CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVC 112
CK C++ G+ C++C GY+ ++ P C C C C + TG+C C
Sbjct: 391 CKNCRENTEGVNCNKCSFGYFRPEGVTWNEPQ--PCKVCDCDPDKHTGA-CAEETGKCEC 447
Query: 113 KPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPC----NGEPPVINLQTGVELDCGSGANR 168
P G C++C +G + KPC NG + L + C +G
Sbjct: 448 LPRFVGEDCDQCA--------SGYYDAPKCKPCECNVNGTIGDVCLPEDGQCPCKAGFGG 499
Query: 169 EDCPS--DAYCHITQNFARC 186
C + D Y ++T C
Sbjct: 500 TFCETCADGYTNVTAGCVEC 519
Score = 66 (28.3 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 17/64 (26%), Positives = 24/64 (37%)
Query: 109 RCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVK-PCNGEPPVINLQTGVELDCGSGAN 167
+C C G C C ++ +G G V CNG + TG+ DC N
Sbjct: 1796 QCQCPAPYTGPSCQLCASGYHRV-QSGSFLGACVPCECNGHSATCDPDTGICTDCEHNTN 1854
Query: 168 REDC 171
+ C
Sbjct: 1855 GDHC 1858
Score = 37 (18.1 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 29 AGCPSTCGCNKL 40
A CPS GC L
Sbjct: 1305 AFCPSISGCRAL 1316
>RGD|1309399 [details] [associations]
symbol:Lamc3 "laminin gamma 3" species:10116 "Rattus norvegicus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=ISO] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0007601 "visual perception" evidence=ISO] [GO:0014002
"astrocyte development" evidence=ISO] [GO:0060041 "retina
development in camera-type eye" evidence=ISO] RGD:1309399
GO:GO:0007601 GO:GO:0060041 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 OrthoDB:EOG498TZW EMBL:AC105586 IPI:IPI00950417
Ensembl:ENSRNOT00000066978 UCSC:RGD:1309399 ArrayExpress:D3ZYW4
Uniprot:D3ZYW4
Length = 1580
Score = 218 (81.8 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 50/124 (40%), Positives = 61/124 (49%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P L G GC S C C+ +GS E+ C T QC C+ GV G CDRC+ G++G
Sbjct: 912 CSPGFYDLQPG---RGCQS-CKCHPVGSLENKCHPKTGQCPCRPGVTGQACDRCQLGFFG 967
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKL--G 132
S I GC C CS G+ C + CVC+PG G KC+ C D N L G
Sbjct: 968 FS--------IKGCRDCRCSPLGAASPQCHE-NSTCVCRPGFVGYKCDRCQD-NFFLVDG 1017
Query: 133 PNGC 136
GC
Sbjct: 1018 DTGC 1021
Score = 195 (73.7 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 43/125 (34%), Positives = 58/125 (46%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGST-EDACIEDTEQCKCKQG 59
+G + + C + +YG LA P + P C C+ GS+ + C T QC C
Sbjct: 851 TGAHCEHCQEGFYG-----SALATRPADKCAP--CSCDPRGSSSQKTCNPATGQCACLPY 903
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGS 119
V G C RC PG++ L P GC C C GS+ C TG+C C+PGV G
Sbjct: 904 VTGRDCSRCSPGFYDLQ------PG-RGCQSCKCHPVGSLENKCHPKTGQCPCRPGVTGQ 956
Query: 120 KCNEC 124
C+ C
Sbjct: 957 ACDRC 961
Score = 170 (64.9 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 47/152 (30%), Positives = 64/152 (42%)
Query: 2 GIYLKSCLDSWYG--CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQG 59
G + + C D G C K + C C C+ GS C +++ C CK
Sbjct: 358 GGHCQRCRDHTAGPHCEHCEKNYYRWDPKTPC-QPCDCHPAGSLSLQC-DNSGTCPCKLT 415
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGS 119
V G KCDRC PG+ LS+ GC C C+ GS+ C+ +G C CK V+G
Sbjct: 416 VTGWKCDRCLPGFHSLSE--------GGCRPCTCNVAGSLGT-CDPRSGNCPCKENVEGG 466
Query: 120 KCNEC------LDPNKKLGPNGCMPGMEVKPC 145
C+ C L P+ G + C K C
Sbjct: 467 LCDRCRPGTFNLQPHNPAGCSSCFCYGHSKVC 498
Score = 125 (49.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 30/93 (32%), Positives = 41/93 (44%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C CN+ G+ C +T C C G C+RC PG++G + S +A D C C C
Sbjct: 719 CTCNQHGT----CDPNTGICLCGHHTEGPSCERCMPGFYG-NAFSGHADD---CQPCPCP 770
Query: 95 QFGSVREDCEQMTGRCV-CKPGVKGSKCNECLD 126
+ E C C PG +G +C C D
Sbjct: 771 GQSACTTIPESRDVVCTHCPPGQRGRRCESCED 803
Score = 118 (46.6 bits), Expect = 0.00029, P = 0.00029
Identities = 30/111 (27%), Positives = 45/111 (40%)
Query: 52 EQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV 111
E C C QG G C+ C GY +I P C+ C C+Q G+ C+ TG C+
Sbjct: 683 ETCLCPQGYTGQFCEFCALGY--KREIPHGGP-YTNCIPCTCNQHGT----CDPNTGICL 735
Query: 112 CKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDC 162
C +G C C+ +G + PC G+ + ++ C
Sbjct: 736 CGHHTEGPSCERCMPGFYGNAFSGHADDCQPCPCPGQSACTTIPESRDVVC 786
Score = 116 (45.9 bits), Expect = 0.00050, P = 0.00050
Identities = 40/155 (25%), Positives = 57/155 (36%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDA-CIEDTEQCKCKQGVGGLKCD 66
C+ +YG A CP C + + D C C G G +C+
Sbjct: 748 CMPGFYGNAFSGH--ADDCQPCPCPGQSACTTIPESRDVVCTH------CPPGQRGRRCE 799
Query: 67 RCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRE--DCEQMTGRCV-CKPGVKGSKCNE 123
CE G++G S AP C +C CS+ + +C+ +GRC+ C G+ C
Sbjct: 800 SCEDGFFGDPLGLSGAPQ--PCRRCQCSRNVDLNAVGNCDPHSGRCLRCLHNTTGAHCEH 857
Query: 124 CLD----------PNKKLGPNGCMP--GMEVKPCN 146
C + P K P C P K CN
Sbjct: 858 CQEGFYGSALATRPADKCAPCSCDPRGSSSQKTCN 892
>RGD|628777 [details] [associations]
symbol:Ush2a "Usher syndrome 2A (autosomal recessive, mild)"
species:10116 "Rattus norvegicus" [GO:0002142 "stereocilia ankle
link complex" evidence=ISO] [GO:0005518 "collagen binding"
evidence=ISO] [GO:0005578 "proteinaceous extracellular matrix"
evidence=NAS] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA;ISO] [GO:0016324 "apical plasma membrane"
evidence=ISO] [GO:0017022 "myosin binding" evidence=ISO]
[GO:0032421 "stereocilium bundle" evidence=ISO] [GO:0045494
"photoreceptor cell maintenance" evidence=ISO] [GO:0048496
"maintenance of organ identity" evidence=ISO] [GO:0050896 "response
to stimulus" evidence=IEA] [GO:0050953 "sensory perception of light
stimulus" evidence=ISO] [GO:0060113 "inner ear receptor cell
differentiation" evidence=ISO] [GO:0060171 "stereocilium membrane"
evidence=ISO] [GO:0001917 "photoreceptor inner segment"
evidence=IDA] [GO:0032391 "photoreceptor connecting cilium"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
RGD:628777 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0007601
SUPFAM:SSF49265 GO:GO:0005578 GO:GO:0050896 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0007605 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 CTD:7399
eggNOG:NOG245744 InterPro:IPR026915 PANTHER:PTHR10574:SF53
EMBL:AY077844 IPI:IPI00202312 RefSeq:NP_001231686.1
RefSeq:NP_742045.2 UniGene:Rn.200477 ProteinModelPortal:Q8K3K1
STRING:Q8K3K1 PhosphoSite:Q8K3K1 PRIDE:Q8K3K1 GeneID:289369
KEGG:rno:289369 UCSC:RGD:628777 NextBio:629723
Genevestigator:Q8K3K1 Uniprot:Q8K3K1
Length = 1512
Score = 216 (81.1 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 58/174 (33%), Positives = 85/174 (48%)
Query: 23 AQGPDNAGCPSTCGCNKLGSTED--ACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISS 80
A PD C C CN G+ + C ++ QC CK V GL+CDRC G+ L +++
Sbjct: 681 ALDPD---CCRPCDCNPSGTVDGDITCHHNSGQCSCKANVIGLRCDRCSFGFKFLRSLNA 737
Query: 81 YAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGM 140
DGC C C+ GSV + C+ ++G+CVCK KG +C+ C + L + C
Sbjct: 738 -----DGCEPCHCNLHGSVNQLCDPLSGQCVCKKEAKGLRCDVCRENFYGLPWSAC---- 788
Query: 141 EVKPCN--GEPP--VINLQTGVELDC--GSGANR-EDCPSDAYCHITQNFARCC 187
EV CN G V + +TG + C G R +C + Y ++ QN + C
Sbjct: 789 EVCDCNRAGTQAGTVCDAETG-QCVCKPSVGGRRCSEC-KEGYFNLRQNDSHLC 840
Score = 201 (75.8 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 41/114 (35%), Positives = 58/114 (50%)
Query: 29 AGCPSTCGCNKLGSTEDA-CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
+ C C CN+ G+ C +T QC CK VGG +C C+ GY+ L + S+
Sbjct: 786 SAC-EVCDCNRAGTQAGTVCDAETGQCVCKPSVGGRRCSECKEGYFNLRQNDSHL----- 839
Query: 88 CLKCGCSQFGSVRED--CEQMTGRCVCKPGVKGSKCNECLDPNKKL---GPNGC 136
CL C C + G+V C++ TG+C CK GV G +C++C L P GC
Sbjct: 840 CLPCNCEKTGTVNGSLLCDKSTGQCPCKLGVTGLRCHQCKPHRFNLTMDNPQGC 893
Score = 178 (67.7 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 45/145 (31%), Positives = 68/145 (46%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDT--EQCKCKQ 58
+G +SC D +Y + + P + C CN+ G+ + + D +QC CK+
Sbjct: 609 TGRNCESCQDYFY------RPIGADPADPEVCKHCDCNRDGTRNGSLLCDLVGDQCDCKR 662
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED--CEQMTGRCVCKPGV 116
V G +C RC G++GL + D D C C C+ G+V D C +G+C CK V
Sbjct: 663 RVSGRRCFRCHIGFYGLQAL-----DPDCCRPCDCNPSGTVDGDITCHHNSGQCSCKANV 717
Query: 117 KGSKCNECLDPNK---KLGPNGCMP 138
G +C+ C K L +GC P
Sbjct: 718 IGLRCDRCSFGFKFLRSLNADGCEP 742
Score = 170 (64.9 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 36/110 (32%), Positives = 57/110 (51%)
Query: 35 CGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
C C K G+ + C + T QC CK GV GL+C +C+P + L+ + P GC C
Sbjct: 843 CNCEKTGTVNGSLLCDKSTGQCPCKLGVTGLRCHQCKPHRFNLTMDN---PQ--GCQACD 897
Query: 93 CSQFGSVRED-CEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN---GCMP 138
C G++ C+ ++G+C+C P + +C +C P P+ GC+P
Sbjct: 898 CDSLGTLLGSMCDPVSGQCLCLPHRQERRCVQC-QPGCYSSPSNATGCLP 946
Score = 139 (54.0 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 37/127 (29%), Positives = 52/127 (40%)
Query: 26 PDNA-GCPSTCGCNKLGSTEDACIEDTEQCKCKQ-GVGGLKCDRCEPGYWGLSKISSYAP 83
P NA GC C C+ + + C T C C GL +C+ Y+ + P
Sbjct: 938 PSNATGC-LPCLCHTVATKNCICNSVTGHCYCPDPSTTGLSWHQCQDRYF------RFDP 990
Query: 84 DIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVK 143
C C C G+ C+ +TG+C CK V GSKC+ C+ L N + +
Sbjct: 991 LTGRCRPCHCHVAGASNGTCDAVTGQCFCKEFVTGSKCDTCVPGASHLDVNNLLACSKT- 1049
Query: 144 PCNGEPP 150
P PP
Sbjct: 1050 PSQQPPP 1056
Score = 124 (48.7 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 38/129 (29%), Positives = 53/129 (41%)
Query: 15 CCPDNKTLAQGPDNA-GCPSTCGCNKLGSTEDA-CIEDTEQCKCKQGVGGLKCDRCEPGY 72
C P L DN GC + C C+ LG+ + C + QC C +C +C+PG
Sbjct: 878 CKPHRFNLTM--DNPQGCQA-CDCDSLGTLLGSMCDPVSGQCLCLPHRQERRCVQCQPGC 934
Query: 73 WGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCK-PGVKGSKCNECLDPNKKL 131
+ S + GCL C C + C +TG C C P G ++C D +
Sbjct: 935 Y------SSPSNATGCLPCLCHTVATKNCICNSVTGHCYCPDPSTTGLSWHQCQDRYFRF 988
Query: 132 GP-NG-CMP 138
P G C P
Sbjct: 989 DPLTGRCRP 997
>UNIPROTKB|F1MAA7 [details] [associations]
symbol:Lamc1 "Protein Lamc1" species:10116 "Rattus
norvegicus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0022617 "extracellular matrix disassembly" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0031581 "hemidesmosome assembly" evidence=IEA] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0043259
"laminin-10 complex" evidence=IEA] RGD:621052 GO:GO:0016477
GO:GO:0006461 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0034446 GO:GO:0031175 GO:GO:0031581 GO:GO:0022617
GO:GO:0005201 GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 GO:GO:0043259 CTD:3915 KO:K05635
OMA:EATDYPW IPI:IPI00363849 RefSeq:NP_446418.1 UniGene:Rn.7145
ProteinModelPortal:F1MAA7 Ensembl:ENSRNOT00000003605 GeneID:117036
KEGG:rno:117036 NextBio:619829 Uniprot:F1MAA7
Length = 1607
Score = 216 (81.1 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 46/140 (32%), Positives = 64/140 (45%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTED--ACIEDTEQCKCKQ 58
+G Y C + ++G LA P + C + C CN G+ + +C T QC+C
Sbjct: 855 AGFYCDRCKEGFFG-----NPLAPNPADK-CKA-CACNPYGTVQQQSSCNPVTGQCQCLP 907
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
V G C C+PG++ L S GC C C GS C+ TG+C C+PG+ G
Sbjct: 908 HVSGRDCGACDPGFYNLQ--SG-----QGCESCDCHALGSTNGQCDIRTGQCECQPGITG 960
Query: 119 SKCNECLDPNKKLGPNGCMP 138
C C + GP GC P
Sbjct: 961 QHCERCETNHFGFGPEGCKP 980
Score = 196 (74.1 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 41/110 (37%), Positives = 57/110 (51%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P L G GC S C C+ LGST C T QC+C+ G+ G C+RCE ++G
Sbjct: 917 CDPGFYNLQSGQ---GCES-CDCHALGSTNGQCDIRTGQCECQPGITGQHCERCETNHFG 972
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
+ P+ GC C C GS+ C+ GRC C+ G G++C++C
Sbjct: 973 ------FGPE--GCKPCDCHHEGSLSLQCKD-DGRCECREGFVGNRCDQC 1013
Score = 174 (66.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 49/171 (28%), Positives = 75/171 (43%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCD 66
C D ++G + + GP P C N + C T +C KC G CD
Sbjct: 805 CDDGYFG----DPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCD 860
Query: 67 RCEPGYWGLSKISSYAPD-IDGCLKCGCSQFGSVRED--CEQMTGRCVCKPGVKGSKCNE 123
RC+ G++G + AP+ D C C C+ +G+V++ C +TG+C C P V G C
Sbjct: 861 RCKEGFFG----NPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGA 916
Query: 124 CLDP---NKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
C DP N + G GC + +++TG + +C G + C
Sbjct: 917 C-DPGFYNLQSG-QGC-ESCDCHALGSTNGQCDIRTG-QCECQPGITGQHC 963
Score = 170 (64.9 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 55/182 (30%), Positives = 77/182 (42%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE--------- 52
G+ + CL ++ P + A+ N P C CN G +++ C D E
Sbjct: 311 GVDCEKCLP-FFNDRPWRRATAESA-NQCLP--CDCN--GRSQE-CYFDPELYRSTGHGG 363
Query: 53 QC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV 111
C C+ G KC+RC ++ L + + C C CS GS+ C+ GRC
Sbjct: 364 HCTNCRDNTDGAKCERCRENFFRLG-------NTEACSPCHCSPVGSLSTQCDSY-GRCS 415
Query: 112 CKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTG--VELDCGSGANRE 169
CKPGV G KC+ C L GC P P +G N++TG V D G + E
Sbjct: 416 CKPGVMGDKCDRCQPGFHSLTEAGCRP-CSCDP-SGSTDECNVETGRCVCKDNVEGFSCE 473
Query: 170 DC 171
C
Sbjct: 474 RC 475
Score = 135 (52.6 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 33/83 (39%), Positives = 40/83 (48%)
Query: 29 AGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
AGC C C+ GST D C +T +C CK V G C+RC+PG++ L S P GC
Sbjct: 438 AGC-RPCSCDPSGST-DECNVETGRCVCKDNVEGFSCERCKPGFFNLE---SSNPK--GC 490
Query: 89 LKCGCSQFGSVREDCEQMTGRCV 111
C C SV C G V
Sbjct: 491 TPCFCFGHSSV---CTNAVGYSV 510
Score = 135 (52.6 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 43/157 (27%), Positives = 67/157 (42%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ--CK-CK 57
+G + + C D +YG + TL D CP C G + A + T++ C C
Sbjct: 745 AGPHCEKCSDGYYG----DSTLGTSSDCQPCP--CP----GGSSCAIVPKTKEVVCTHCP 794
Query: 58 QGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQF--GSVREDCEQMTGRCV-CKP 114
G G +C+ C+ GY+G + S P + C C C+ + +C ++TG C+ C
Sbjct: 795 TGTAGKRCELCDDGYFG-DPLGSNGP-VRLCRPCQCNDNIDPNAVGNCNRLTGECLKCIY 852
Query: 115 GVKGSKCNECLDP--NKKLGPNGCMPGMEVKPCNGEP 149
G C+ C + L PN P + K C P
Sbjct: 853 NTAGFYCDRCKEGFFGNPLAPN---PADKCKACACNP 886
Score = 128 (50.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 49/160 (30%), Positives = 67/160 (41%)
Query: 15 CCPD--NKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGY 72
C P +T + GP + C C CN G +E C +T C C+ G C++C GY
Sbjct: 702 CLPGYRRETPSLGPYSP-CV-LCTCN--GHSE-TCDPETGVCDCRDNTAGPHCEKCSDGY 756
Query: 73 WGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNECLDP--NK 129
+G S + + + D C G S V + E + C C G G +C C D
Sbjct: 757 YGDSTLGT-SSDCQPCPCPGGSSCAIVPKTKEVV---CTHCPTGTAGKRCELCDDGYFGD 812
Query: 130 KLGPNGCMPGMEVKPC----NGEPPVI---NLQTGVELDC 162
LG NG P +PC N +P + N TG L C
Sbjct: 813 PLGSNG--PVRLCRPCQCNDNIDPNAVGNCNRLTGECLKC 850
Score = 127 (49.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 33/101 (32%), Positives = 44/101 (43%)
Query: 52 EQCKCKQGVGGLKCDRCEPGYWGLS-KISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRC 110
E C C G GG C+ C PGY + + Y+P C+ C C+ E C+ TG C
Sbjct: 686 ESCTCPVGYGGQFCETCLPGYRRETPSLGPYSP----CVLCTCNGHS---ETCDPETGVC 738
Query: 111 VCKPGVKGSKCNECLDP---NKKLGPNG-CMPGMEVKPCNG 147
C+ G C +C D + LG + C P PC G
Sbjct: 739 DCRDNTAGPHCEKCSDGYYGDSTLGTSSDCQPC----PCPG 775
>UNIPROTKB|F1NZ77 [details] [associations]
symbol:USH2A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0002142 "stereocilia ankle link complex" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0016324
"apical plasma membrane" evidence=IEA] [GO:0017022 "myosin binding"
evidence=IEA] [GO:0035315 "hair cell differentiation" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0048496 "maintenance of organ identity" evidence=IEA]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IEA]
[GO:0060171 "stereocilium membrane" evidence=IEA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016324
SUPFAM:SSF49265 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604
Pfam:PF02210 GO:GO:0032421 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0002142
GeneTree:ENSGT00700000104042 OMA:EIRIQAC InterPro:IPR026915
PANTHER:PTHR10574:SF53 EMBL:AADN02012097 EMBL:AADN02012098
EMBL:AADN02012099 EMBL:AADN02012100 EMBL:AADN02012101
EMBL:AADN02012102 EMBL:AADN02012103 IPI:IPI00599063
Ensembl:ENSGALT00000015728 ArrayExpress:F1NZ77 Uniprot:F1NZ77
Length = 5217
Score = 221 (82.9 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 64/195 (32%), Positives = 85/195 (43%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTED--ACIEDTEQCKCKQ 58
SG C + +Y N PD GC S C CN G+ C +++ QCKCK
Sbjct: 668 SGRQCNQCQEGFYNLQQSN------PD--GC-SPCNCNTSGTVNGDITCHQNSGQCKCKA 718
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
V G +CD C G+ K Y+ + DGC C C+ GSV + C +TG+C CK VKG
Sbjct: 719 NVIGPRCDSCNFGF----KALRYSNE-DGCEPCWCNSHGSVNQFCNPLTGQCNCKEQVKG 773
Query: 119 SKCNECLDPNKKLGPNGCMPGMEVKPCN--GE--PPVINLQTGVELDCGSGANREDCPS- 173
C+ C+D L GC + CN G V + +TG + C C
Sbjct: 774 LLCDTCVDNFYGLDVTGC----KACECNIAGSFAGTVCDARTG-QCACKPNIGGRQCNEC 828
Query: 174 -DAYCHITQNFARCC 187
D Y I N + C
Sbjct: 829 LDGYHRIQVNHSFVC 843
Score = 197 (74.4 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 44/127 (34%), Positives = 63/127 (49%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGS-TEDACIEDTEQCKCKQGV 60
G+ +C+D++YG D GC + C CN GS C T QC CK +
Sbjct: 773 GLLCDTCVDNFYGL-----------DVTGCKA-CECNIAGSFAGTVCDARTGQCACKPNI 820
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED--CEQMTGRCVCKPGVKG 118
GG +C+ C GY + S+ CL C C + G+V C++ TG+C CK GV G
Sbjct: 821 GGRQCNECLDGYHRIQVNHSFV-----CLPCDCDKAGTVNGSLLCDKSTGQCPCKAGVIG 875
Query: 119 SKCNECL 125
+CN+C+
Sbjct: 876 LQCNQCM 882
Score = 184 (69.8 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 39/110 (35%), Positives = 60/110 (54%)
Query: 35 CGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
C C+K G+ + C + T QC CK GV GL+C++C + LS ++ GC +C
Sbjct: 846 CDCDKAGTVNGSLLCDKSTGQCPCKAGVIGLQCNQCMLHTYNLSM-----RNLLGCQRCD 900
Query: 93 CSQFGSVRED-CEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN---GCMP 138
C G++ C+ ++G+CVC P +G +CNEC P P+ GC+P
Sbjct: 901 CDAKGTLAGTVCDHVSGQCVCLPHRQGRRCNEC-KPGFYFSPSSVTGCLP 949
Score = 173 (66.0 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 38/111 (34%), Positives = 57/111 (51%)
Query: 35 CGCNKLGSTEDACIEDT--EQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
C C G+ + + D QC CK+ V G +C++C+ G++ L + + PD GC C
Sbjct: 640 CDCYATGTKNKSLLCDNIGGQCNCKRHVSGRQCNQCQEGFYNLQQSN---PD--GCSPCN 694
Query: 93 CSQFGSVRED--CEQMTGRCVCKPGVKGSKCNECLDPNKKL---GPNGCMP 138
C+ G+V D C Q +G+C CK V G +C+ C K L +GC P
Sbjct: 695 CNTSGTVNGDITCHQNSGQCKCKANVIGPRCDSCNFGFKALRYSNEDGCEP 745
Score = 170 (64.9 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 38/122 (31%), Positives = 54/122 (44%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQ-GVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
GC C C+ GS C + T QC C+ V G C+RC+ ++G ++ C
Sbjct: 946 GC-LPCLCHTAGSVNQVCDKLTGQCICQDVSVTGRTCERCKEHHFGFDSVTGR------C 998
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGE 148
C C G++ C +TG+CVCK V G KC+ C+ L + G P
Sbjct: 999 QHCNCHPAGAISGTCHLVTGQCVCKQFVTGLKCDNCVPNASNLDVHNLF-GCSKTPFQQP 1057
Query: 149 PP 150
PP
Sbjct: 1058 PP 1059
Score = 159 (61.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 32/98 (32%), Positives = 50/98 (51%)
Query: 30 GCPSTCGCNKLGSTEDA-CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD-IDG 87
GC C C+ G+ C + QC C G +C+ C+PG++ ++P + G
Sbjct: 895 GC-QRCDCDAKGTLAGTVCDHVSGQCVCLPHRQGRRCNECKPGFY-------FSPSSVTG 946
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKP-GVKGSKCNEC 124
CL C C GSV + C+++TG+C+C+ V G C C
Sbjct: 947 CLPCLCHTAGSVNQVCDKLTGQCICQDVSVTGRTCERC 984
>UNIPROTKB|F1NJ23 [details] [associations]
symbol:LAMB1 "Laminin subunit beta-1" species:9031 "Gallus
gallus" [GO:0005178 "integrin binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0007162 "negative
regulation of cell adhesion" evidence=IEA] [GO:0007566 "embryo
implantation" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0030335 "positive regulation of cell migration" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0034446 "substrate adhesion-dependent cell spreading"
evidence=IEA] [GO:0042476 "odontogenesis" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] GO:GO:0048471 GO:GO:0005615 GO:GO:0016477
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005201
GO:GO:0043208 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005606 GO:GO:0043259
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:NTWQLAS EMBL:AADN02036854 EMBL:AADN02036852 EMBL:AADN02036853
IPI:IPI00586930 Ensembl:ENSGALT00000012832 ArrayExpress:F1NJ23
Uniprot:F1NJ23
Length = 1782
Score = 216 (81.1 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 44/122 (36%), Positives = 67/122 (54%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTE--DACIEDTEQCKCKQGVGGLKC 65
C + +YG D D +GC S C CN LG+ + C +T C CK+ V G +C
Sbjct: 431 CKEGFYGLSAD--------DPSGCQS-CACNPLGTHPGGNPCDSETGNCYCKRLVTGKQC 481
Query: 66 DRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECL 125
++C P +WGLS D+DGC C C Q G++ +C +G+C C+P + G +CN+ +
Sbjct: 482 NQCLPEHWGLSN------DMDGCRPCDCDQGGALHNNCSSESGQCECRPHMFGRQCNQ-V 534
Query: 126 DP 127
+P
Sbjct: 535 EP 536
Score = 200 (75.5 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 51/146 (34%), Positives = 67/146 (45%)
Query: 34 TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
+C C+ GS C QC+C+ V G +C+RC PG +G + P GC C C
Sbjct: 764 SCQCDPQGSLSSVCDPSGGQCQCRPNVVGRQCNRCAPGTFG------FGPS--GCRPCEC 815
Query: 94 SQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVIN 153
GS C+ TG+C C PGV G +C+ CL P P+ C P CNG +
Sbjct: 816 HLRGSYNSFCDAETGQCHCFPGVYGRQCDRCL-PGFWGFPS-CQPCH----CNGHADDCS 869
Query: 154 LQTGVELDCG---SGANREDCPSDAY 176
TG L C +G N E C + Y
Sbjct: 870 PYTGECLHCRDHTAGPNCERCEAGYY 895
Score = 196 (74.1 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 42/124 (33%), Positives = 59/124 (47%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P+ LA G GC C C+ S AC E T QC C G GG C C+ +WG
Sbjct: 1061 CAPNTWRLASG---TGC-EPCDCDTARSIGLACNEFTGQCHCMPGFGGRTCRECQELFWG 1116
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN 134
P ++ C C C+ G C++ TG+C+C GV+G +C++C P+
Sbjct: 1117 -------DPSVE-CRACDCNPRGIQTPQCDRATGQCICNEGVEGPRCDKCSRGYSGFFPD 1168
Query: 135 GCMP 138
C+P
Sbjct: 1169 -CVP 1171
Score = 179 (68.1 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 46/140 (32%), Positives = 60/140 (42%)
Query: 35 CGCNKLGSTEDACIEDTE---------QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
C CN LG+ + C +D E QC+C GV G CDRC P W L+ +
Sbjct: 1020 CVCNYLGTVREDC-DDAENCRCEAATGQCRCLPGVVGQTCDRCAPNTWRLASGT------ 1072
Query: 86 DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECL-----DPNKKLGPNGCMP-G 139
GC C C S+ C + TG+C C PG G C EC DP+ + C P G
Sbjct: 1073 -GCEPCDCDTARSIGLACNEFTGQCHCMPGFGGRTCRECQELFWGDPSVECRACDCNPRG 1131
Query: 140 MEVKPCNGEPPVINLQTGVE 159
++ C+ GVE
Sbjct: 1132 IQTPQCDRATGQCICNEGVE 1151
Score = 177 (67.4 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 48/127 (37%), Positives = 59/127 (46%)
Query: 26 PDNAG--CPSTCGCNK-LGSTE-DACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISS 80
PD G C C CN + ST+ +AC + T C KC G C C GY+G S+
Sbjct: 958 PDEVGGAC-QPCQCNNNIDSTDPEACDKRTGTCVKCLYHTEGENCHLCRQGYYG----SA 1012
Query: 81 YAPDIDGCLKCGCSQFGSVREDC--------EQMTGRCVCKPGVKGSKCNECLDPNKKLG 132
D C KC C+ G+VREDC E TG+C C PGV G C+ C +L
Sbjct: 1013 LQQD---CRKCVCNYLGTVREDCDDAENCRCEAATGQCRCLPGVVGQTCDRCAPNTWRLA 1069
Query: 133 PN-GCMP 138
GC P
Sbjct: 1070 SGTGCEP 1076
Score = 175 (66.7 bits), Expect = 9.8e-12, P = 9.8e-12
Identities = 42/117 (35%), Positives = 56/117 (47%)
Query: 35 CGCNKLGSTEDA-CIEDTE--------QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
C C+ GS C T+ QC+CK V G +CD C+ G++GLS A D
Sbjct: 389 CNCDPAGSQNGGVCDRYTDFSTGLIAGQCRCKLFVEGERCDLCKEGFYGLS-----ADDP 443
Query: 86 DGCLKCGCSQFGSVR--EDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN--GCMP 138
GC C C+ G+ C+ TG C CK V G +CN+CL + L + GC P
Sbjct: 444 SGCQSCACNPLGTHPGGNPCDSETGNCYCKRLVTGKQCNQCLPEHWGLSNDMDGCRP 500
Score = 169 (64.5 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 41/111 (36%), Positives = 50/111 (45%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P T GP +GC C C+ GS C +T QC C GV G +CDRC PG+WG
Sbjct: 798 CAPG--TFGFGP--SGC-RPCECHLRGSYNSFCDAETGQCHCFPGVYGRQCDRCLPGFWG 852
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNEC 124
P C C C+ G +DC TG C+ C+ G C C
Sbjct: 853 F-------PS---CQPCHCN--GHA-DDCSPYTGECLHCRDHTAGPNCERC 890
Score = 136 (52.9 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 55/182 (30%), Positives = 71/182 (39%)
Query: 30 GCPST--CGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
G PS C CN G +D C T +C C+ G C+RCE GY+G + S D
Sbjct: 852 GFPSCQPCHCN--GHADD-CSPYTGECLHCRDHTAGPNCERCEAGYYGDPILGSG----D 904
Query: 87 GCLKCGCS-------QFGS-VREDCEQMTGRCVCKPGVKGSKCNECLD-----PNKKLGP 133
C C C QF S +D + CVC G GS+C+EC P++ G
Sbjct: 905 HCRPCPCPDGPESGRQFASGCYQDPVTLQVVCVCSTGYIGSRCDECASGFFGSPDEVGG- 963
Query: 134 NGCMPGMEVKPCNG-----EPPVINLQTGVELDC---GSGANREDCPSDAYCHITQNFAR 185
C P CN +P + +TG + C G N C Y Q R
Sbjct: 964 -ACQPCQ----CNNNIDSTDPEACDKRTGTCVKCLYHTEGENCHLCRQGYYGSALQQDCR 1018
Query: 186 CC 187
C
Sbjct: 1019 KC 1020
Score = 120 (47.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP 138
L C C GS+ C+ G+C C+P V G +CN C GP+GC P
Sbjct: 763 LSCQCDPQGSLSSVCDPSGGQCQCRPNVVGRQCNRCAPGTFGFGPSGCRP 812
Score = 120 (47.3 bits), Expect = 0.00018, P = 0.00018
Identities = 28/85 (32%), Positives = 39/85 (45%)
Query: 8 CLDSWYG-CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCD 66
C+ + G C + + L G + C + C CN G C T QC C +GV G +CD
Sbjct: 1098 CMPGFGGRTCRECQELFWGDPSVECRA-CDCNPRGIQTPQCDRATGQCICNEGVEGPRCD 1156
Query: 67 RCEPGYWGLSKISSYAPDIDGCLKC 91
+C GY S + PD C +C
Sbjct: 1157 KCSRGY------SGFFPDCVPCHQC 1175
Score = 108 (43.1 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 20/62 (32%), Positives = 37/62 (59%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P++ L+ D GC C C++ G+ + C ++ QC+C+ + G +C++ EPGY+
Sbjct: 484 CLPEHWGLSNDMD--GC-RPCDCDQGGALHNNCSSESGQCECRPHMFGRQCNQVEPGYYF 540
Query: 75 LS 76
+S
Sbjct: 541 IS 542
>UNIPROTKB|F1MD77 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0022617 "extracellular
matrix disassembly" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] GO:GO:0016477 GO:GO:0006461 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446 GO:GO:0031175
GO:GO:0031581 GO:GO:0022617 GO:GO:0005201 GO:GO:0043208
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GeneTree:ENSGT00690000102103
GO:GO:0043259 OMA:EATDYPW EMBL:DAAA02043571 EMBL:DAAA02043567
EMBL:DAAA02043568 EMBL:DAAA02043569 EMBL:DAAA02043570
IPI:IPI01018593 UniGene:Bt.19081 Ensembl:ENSBTAT00000015881
Uniprot:F1MD77
Length = 1608
Score = 215 (80.7 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 57/183 (31%), Positives = 82/183 (44%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGST--EDACIEDTEQCKCKQ 58
+G Y C D ++G LA P + C + C CN G+ + +C T QC+C
Sbjct: 856 AGFYCDRCKDGFFG-----NPLAPNPADK-CRA-CDCNPYGTVKQQSSCNPVTGQCECLP 908
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
V G C C+PG++ L S GC +C C GS C+ +G+C C+PG+ G
Sbjct: 909 HVTGRDCGACDPGFYNLQ--SG-----QGCERCDCHALGSTNGQCDVHSGQCECQPGITG 961
Query: 119 SKCNECLDPNKKLGPNGCMPGMEVKPCNGEPP-VINLQTGVE--LDCGSG--ANREDCPS 173
C C + GP GC KPC+ P ++LQ + +C G NR D
Sbjct: 962 QHCEHCEVNHFGFGPEGC------KPCDCHPEGSLSLQCKDDGRCECREGFVGNRCDQCE 1015
Query: 174 DAY 176
+ Y
Sbjct: 1016 ENY 1018
Score = 214 (80.4 bits), Expect = 6.1e-16, P = 6.1e-16
Identities = 54/145 (37%), Positives = 71/145 (48%)
Query: 2 GIYLKSCLDSWYG--C--CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCK 57
G + +C D+ G C C +N G A C S C C+ +GS C + +C CK
Sbjct: 363 GGHCTNCQDNTDGAKCERCREN-FFRLGNREA-C-SPCHCSPVGSLSTQC-DSYGRCSCK 418
Query: 58 QGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVK 117
GV G KCDRC+PGY L++ GC C C+ GS+ ++C TGRCVCK V+
Sbjct: 419 PGVMGDKCDRCQPGYHSLTEA--------GCRPCSCNPSGSI-DECNIETGRCVCKDNVE 469
Query: 118 GSKCNECLDPN----KKLGPNGCMP 138
G C C P + P GC P
Sbjct: 470 GFNCERC-KPGFFNLESSNPRGCTP 493
Score = 174 (66.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 57/198 (28%), Positives = 82/198 (41%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE--------- 52
G+ + CL ++ P + A+ C C CN G +++ C D E
Sbjct: 312 GVDCEKCLP-FFNDRPWRRATAESASE--C-QPCDCN--GRSQE-CYFDPELYRSTGHGG 364
Query: 53 QC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV 111
C C+ G KC+RC ++ L + + C C CS GS+ C+ GRC
Sbjct: 365 HCTNCQDNTDGAKCERCRENFFRLG-------NREACSPCHCSPVGSLSTQCDSY-GRCS 416
Query: 112 CKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTG--VELDCGSGANRE 169
CKPGV G KC+ C L GC P P +G N++TG V D G N E
Sbjct: 417 CKPGVMGDKCDRCQPGYHSLTEAGCRP-CSCNP-SGSIDECNIETGRCVCKDNVEGFNCE 474
Query: 170 DCPSDAYCHITQNFARCC 187
C + ++ + R C
Sbjct: 475 RC-KPGFFNLESSNPRGC 491
Score = 157 (60.3 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 39/111 (35%), Positives = 54/111 (48%)
Query: 35 CGCNKL--GSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPD-IDGCLK 90
C CN + C T +C KC G CDRC+ G++G + AP+ D C
Sbjct: 827 CQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFG----NPLAPNPADKCRA 882
Query: 91 CGCSQFGSVRED--CEQMTGRCVCKPGVKGSKCNECLDP---NKKLGPNGC 136
C C+ +G+V++ C +TG+C C P V G C C DP N + G GC
Sbjct: 883 CDCNPYGTVKQQSSCNPVTGQCECLPHVTGRDCGAC-DPGFYNLQSG-QGC 931
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 39/136 (28%), Positives = 55/136 (40%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C CN G +E C ++ C C+ G C++C GY+G S + +D C C C
Sbjct: 723 CTCN--GHSE-TCDPESGVCNCRDNTAGPNCEKCSDGYYGDSTAGT---SLD-CQPCPCP 775
Query: 95 QFGSVREDCEQMTGRCV-CKPGVKGSKCNECLDPN--KKLGPNGCMPGMEVKPCNG--EP 149
S + C C G G +C C D + LG NG + + CN +P
Sbjct: 776 GGSSCAVVPKTQEVVCTNCPTGTTGRRCELCDDGHFGDPLGSNGPVRLCRLCQCNDNIDP 835
Query: 150 PVI---NLQTGVELDC 162
+ N TG L C
Sbjct: 836 NAVGNCNRLTGECLKC 851
Score = 114 (45.2 bits), Expect = 0.00091, P = 0.00091
Identities = 27/95 (28%), Positives = 41/95 (43%)
Query: 52 EQCKCKQGVGGLKCDRCEPGYWGLS-KISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRC 110
E C C G GG C+ C GY + + Y+P C+ C C+ E C+ +G C
Sbjct: 687 ESCTCPVGYGGQFCEVCLSGYRRETPSLGPYSP----CVLCTCNGHS---ETCDPESGVC 739
Query: 111 VCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPC 145
C+ G C +C D G + ++ +PC
Sbjct: 740 NCRDNTAGPNCEKCSDGY--YGDSTAGTSLDCQPC 772
>MGI|MGI:1341292 [details] [associations]
symbol:Ush2a "Usher syndrome 2A (autosomal recessive, mild)"
species:10090 "Mus musculus" [GO:0001917 "photoreceptor inner
segment" evidence=ISO] [GO:0002141 "stereocilia ankle link"
evidence=NAS] [GO:0002142 "stereocilia ankle link complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005518 "collagen binding" evidence=ISO;IDA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005604 "basement
membrane" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016324 "apical plasma
membrane" evidence=IDA] [GO:0017022 "myosin binding" evidence=IPI]
[GO:0032391 "photoreceptor connecting cilium" evidence=ISO]
[GO:0032421 "stereocilium bundle" evidence=IDA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045494 "photoreceptor cell maintenance"
evidence=ISO;IMP] [GO:0048496 "maintenance of organ identity"
evidence=ISO] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0050953 "sensory perception of light stimulus" evidence=ISO]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IMP]
[GO:0060171 "stereocilium membrane" evidence=IDA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
MGI:MGI:1341292 GO:GO:0016021 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0045494
GO:GO:0050896 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005518
GO:GO:0007605 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0005604 GO:GO:0060113 Pfam:PF02210
GO:GO:0035315 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0002142 GO:GO:0048496 GO:GO:0060171
GeneTree:ENSGT00700000104042 CTD:7399 eggNOG:NOG245744
HOGENOM:HOG000124780 HOVERGEN:HBG094138 OMA:EIRIQAC
OrthoDB:EOG4B5P57 InterPro:IPR026915 PANTHER:PTHR10574:SF53
EMBL:AF151717 EMBL:DQ073638 EMBL:AC121799 EMBL:AC121892
EMBL:AC122122 EMBL:AC129312 EMBL:AC135863 EMBL:AC165230
IPI:IPI00720231 IPI:IPI00742431 IPI:IPI01007786 RefSeq:NP_067383.3
UniGene:Mm.331238 ProteinModelPortal:Q2QI47 STRING:Q2QI47
PhosphoSite:Q2QI47 PRIDE:Q2QI47 Ensembl:ENSMUST00000060479
GeneID:22283 KEGG:mmu:22283 UCSC:uc007eae.1 UCSC:uc007eaf.1
ChiTaRS:USH2A NextBio:302411 Bgee:Q2QI47 Genevestigator:Q2QI47
GermOnline:ENSMUSG00000026609 Uniprot:Q2QI47
Length = 5193
Score = 220 (82.5 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 57/180 (31%), Positives = 82/180 (45%)
Query: 16 CPDNKTLAQGPDNAGCPSTCGCNKLGSTED--ACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C D Q D GC C CN G+ + C +++ QC CK V GL+C+RC G+
Sbjct: 673 CQDGFYDLQALDPDGC-RPCNCNPSGTVDGDITCHQNSGQCSCKANVIGLRCNRCNFGFK 731
Query: 74 GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGP 133
L + DGC C C+ GSV + C+ ++G+C CK KG KC+ C + L
Sbjct: 732 FLQSFNG-----DGCEPCQCNLHGSVNQLCDPLSGQCACKKEAKGLKCDSCRENFYGLPW 786
Query: 134 NGCMPGMEVKPCN--GEPP--VINLQTGVELDCGSGANREDCPS--DAYCHITQNFARCC 187
+ C EV C+ G P V + +TG + C C Y ++ QN + C
Sbjct: 787 SAC----EVCDCSKAGSQPGTVCDTETG-QCVCKPNVGGRQCSQCKAGYFNLYQNDSHLC 841
Score = 207 (77.9 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 50/141 (35%), Positives = 69/141 (48%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDA-CIEDTEQCKCKQGV 60
G+ SC +++YG P +A C C C+K GS C +T QC CK V
Sbjct: 771 GLKCDSCRENFYGL----------PWSA-C-EVCDCSKAGSQPGTVCDTETGQCVCKPNV 818
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED--CEQMTGRCVCKPGVKG 118
GG +C +C+ GY+ L Y D CL C C + G+V C++ TG+C CK GV G
Sbjct: 819 GGRQCSQCKAGYFNL-----YQNDSHLCLTCNCEKMGTVNGSLRCDKSTGQCPCKLGVTG 873
Query: 119 SKCNECLDPNKKL---GPNGC 136
+C++C L P GC
Sbjct: 874 LRCHQCKPHRFNLTMDNPQGC 894
Score = 189 (71.6 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 38/111 (34%), Positives = 60/111 (54%)
Query: 34 TCGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKC 91
TC C K+G+ + C + T QC CK GV GL+C +C+P + L+ + P GC C
Sbjct: 843 TCNCEKMGTVNGSLRCDKSTGQCPCKLGVTGLRCHQCKPHRFNLTMDN---PQ--GCQAC 897
Query: 92 GCSQFGSVRED-CEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN---GCMP 138
C G++ C+ ++G+C+C P +G +C +C P P+ GC+P
Sbjct: 898 DCDSLGTLPGSMCDPISGQCLCLPHRQGRRCEQC-QPGFYSSPSNATGCLP 947
Score = 189 (71.6 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 53/151 (35%), Positives = 72/151 (47%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDA--CIEDTEQCKCKQ 58
+G + +SC D +Y P A PD C C CN+ G+ + C QC CK+
Sbjct: 610 TGRHCESCQDYFYR--PVGADPA-APD--AC-KLCDCNRAGTRNGSLHCDPIGGQCDCKR 663
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED--CEQMTGRCVCKPGV 116
V G +C +C+ G++ L + D DGC C C+ G+V D C Q +G+C CK V
Sbjct: 664 RVSGRQCLQCQDGFYDLQAL-----DPDGCRPCNCNPSGTVDGDITCHQNSGQCSCKANV 718
Query: 117 KGSKCNECLDPNKKLGP-NGCMPGMEVKPCN 146
G +CN C K L NG G E CN
Sbjct: 719 IGLRCNRCNFGFKFLQSFNG--DGCEPCQCN 747
Score = 167 (63.8 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 41/129 (31%), Positives = 60/129 (46%)
Query: 15 CCPDNKTLAQGPDNA-GCPSTCGCNKLGSTEDA-CIEDTEQCKCKQGVGGLKCDRCEPGY 72
C P L DN GC + C C+ LG+ + C + QC C G +C++C+PG+
Sbjct: 879 CKPHRFNLTM--DNPQGCQA-CDCDSLGTLPGSMCDPISGQCLCLPHRQGRRCEQCQPGF 935
Query: 73 WGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCK-PGVKGSKCNECLDPNKKL 131
+ S + GCL C C G+V C +TG+C C P G C++C + +
Sbjct: 936 Y------SSPSNATGCLPCLCHTAGAVSHICNSVTGQCSCHDPSTTGRSCHQCQESYFRF 989
Query: 132 GP-NG-CMP 138
P G C P
Sbjct: 990 DPLTGRCRP 998
Score = 166 (63.5 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 40/127 (31%), Positives = 53/127 (41%)
Query: 26 PDNA-GCPSTCGCNKLGSTEDACIEDTEQCKCKQ-GVGGLKCDRCEPGYWGLSKISSYAP 83
P NA GC C C+ G+ C T QC C G C +C+ Y+ + P
Sbjct: 939 PSNATGC-LPCLCHTAGAVSHICNSVTGQCSCHDPSTTGRSCHQCQESYF------RFDP 991
Query: 84 DIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVK 143
C C C G+ C+ +TG+C CK V GSKC+ C+ L N + G
Sbjct: 992 LTGRCRPCHCHVAGASNGTCDAVTGQCFCKEFVTGSKCDTCVPGASHLDVNNLL-GCSKT 1050
Query: 144 PCNGEPP 150
P PP
Sbjct: 1051 PSQQPPP 1057
>MGI|MGI:99909 [details] [associations]
symbol:Lama3 "laminin, alpha 3" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0005608 "laminin-3 complex" evidence=ISO] [GO:0005610
"laminin-5 complex" evidence=IDA] [GO:0005913 "cell-cell adherens
junction" evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=ISO] [GO:0030056
"hemidesmosome" evidence=ISO] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031581 "hemidesmosome assembly" evidence=ISO]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
MGI:MGI:99909 GO:GO:0030155 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 HOVERGEN:HBG052300 GO:GO:0005610 EMBL:AJ293592
EMBL:U88353 EMBL:X84014 EMBL:X84013 EMBL:L20478 IPI:IPI00125058
IPI:IPI00988354 UniGene:Mm.42012 ProteinModelPortal:Q61789
SMR:Q61789 STRING:Q61789 PhosphoSite:Q61789 PaxDb:Q61789
PRIDE:Q61789 UCSC:uc008ecf.2 UCSC:uc008ech.1 HOGENOM:HOG000048708
CleanEx:MM_LAMA3 Genevestigator:Q61789
GermOnline:ENSMUSG00000024421 Uniprot:Q61789
Length = 3333
Score = 182 (69.1 bits), Expect = 5.4e-16, Sum P(2) = 5.4e-16
Identities = 45/132 (34%), Positives = 61/132 (46%)
Query: 1 SGIYLKSCLDSWYG---CC--PDNKTLAQGPDN--AGCPSTCGCNKLGSTEDACIEDTEQ 53
SG Y ++C D +Y C P P++ AG C CN G + C +D +
Sbjct: 447 SGDYCETCADGYYNFPFCLRIPVFPNYTPSPEDPVAGNIKGCDCNLEGVLPEIC-DDRGR 505
Query: 54 CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCK 113
C C+ GV G +CD C G SY+ I C C CS GS C+ G+C C
Sbjct: 506 CLCRPGVEGPQCDSCRSG--------SYSFPI--CQACQCSTIGSYPVPCDPGNGQCDCL 555
Query: 114 PGVKGSKCNECL 125
PG+ G +C+ CL
Sbjct: 556 PGITGRQCDRCL 567
Score = 180 (68.4 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 40/114 (35%), Positives = 57/114 (50%)
Query: 29 AGCPSTCGCNKLGSTEDA---CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
AGC C C++ G+ E A C D+ QC+CK V G +CD+C PG P
Sbjct: 1349 AGC-DVCNCSRKGTIEAAVSECDRDSGQCRCKPRVTGQQCDKCAPGL---------LPVP 1398
Query: 86 DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKL---GPNGC 136
C+ C C++ G+ C+ TG C+CK V+G +C C + + L P GC
Sbjct: 1399 LKCVPCSCNRDGTEPSVCDPETGACMCKENVEGPQCQLCREGSFYLDPTNPKGC 1452
Score = 150 (57.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 37/109 (33%), Positives = 53/109 (48%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPGY 72
C P LA+ + GC S C C++ G+ C ++ C CK V G CD CE G+
Sbjct: 610 CKPLYWNLAK-ENPRGC-SECQCHEAGTLSGIGECGQEDGDCSCKAHVTGDACDTCEDGF 667
Query: 73 WGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
+ L K S+Y GC C C G++ C +G C C+ V+G +C
Sbjct: 668 FSLEK-SNYF----GCQGCQCDIGGALTTMCSGPSGVCQCREHVEGKQC 711
Score = 145 (56.1 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 33/106 (31%), Positives = 50/106 (47%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG------LSKISSYAP 83
GC C C+ D C + + C CK G C+ C GY+ + +Y P
Sbjct: 419 GC-IPCSCDP--ERADDCDQGSGHCHCKPNFSGDYCETCADGYYNFPFCLRIPVFPNYTP 475
Query: 84 D----IDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
+ G +K C C+ G + E C+ GRC+C+PGV+G +C+ C
Sbjct: 476 SPEDPVAGNIKGCDCNLEGVLPEICDDR-GRCLCRPGVEGPQCDSC 520
Score = 144 (55.7 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 38/117 (32%), Positives = 53/117 (45%)
Query: 54 CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRE--DCEQMTGRCV 111
C+CKQ V C C+P YW L+K + P GC +C C + G++ +C Q G C
Sbjct: 596 CQCKQHVASPTCSVCKPLYWNLAKEN---PR--GCSECQCHEAGTLSGIGECGQEDGDCS 650
Query: 112 CKPGVKGSKCNEC------LDPNKKLGPNGC---MPGMEVKPCNGEPPVINLQTGVE 159
CK V G C+ C L+ + G GC + G C+G V + VE
Sbjct: 651 CKAHVTGDACDTCEDGFFSLEKSNYFGCQGCQCDIGGALTTMCSGPSGVCQCREHVE 707
Score = 139 (54.0 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 46/172 (26%), Positives = 73/172 (42%)
Query: 15 CCPDNKTLAQGPDNAGCPSTC---G------CNKLGSTEDACIEDTEQCKCKQGVGGLKC 65
C P+ + GP ++G + G C C E T +C C +C
Sbjct: 1276 CSPEGGSALAGPMSSGASAAAVRQGYYGFPYCKPCNCGRRLCEEVTGKCLCPPHTVRPQC 1335
Query: 66 DRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVR---EDCEQMTGRCVCKPGVKGSKCN 122
+ CE + ++ P + GC C CS+ G++ +C++ +G+C CKP V G +C+
Sbjct: 1336 EVCEMNSF------NFHP-VAGCDVCNCSRKGTIEAAVSECDRDSGQCRCKPRVTGQQCD 1388
Query: 123 ECLDPNKKLGPNGCMPGMEVKPCN--G-EPPVINLQTGVELDCGSGANREDC 171
+C P P C+P CN G EP V + +TG + C C
Sbjct: 1389 KCA-PGLLPVPLKCVPCS----CNRDGTEPSVCDPETGACM-CKENVEGPQC 1434
Score = 137 (53.3 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 32/99 (32%), Positives = 43/99 (43%)
Query: 30 GCPSTCGCNKLGSTEDACIED--TEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
G C C S C D +C CK G G +C+RC PGY+G + +
Sbjct: 1729 GSCRVCPCPHTNSFATGCAVDGGAVRCACKPGYTGTQCERCAPGYFGNPQ--KFG---GS 1783
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
C C C+ G + C+ +TG CV + GS EC D
Sbjct: 1784 CQPCNCNSNGQLGP-CDPLTGDCVNQEPKDGSPAEECDD 1821
Score = 132 (51.5 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
C+ G+ C++C GY+ + A + GC+ C C + +DC+Q +G C CKP
Sbjct: 390 CQHNTAGVNCEKCAKGYFRPHGVPVDA--LHGCIPCSCDPERA--DDCDQGSGHCHCKPN 445
Query: 116 VKGSKCNECLD 126
G C C D
Sbjct: 446 FSGDYCETCAD 456
Score = 114 (45.2 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 26/70 (37%), Positives = 34/70 (48%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C CN+ G+ C +T C CK+ V G +C C G + L + P GC KC C
Sbjct: 1404 CSCNRDGTEPSVCDPETGACMCKENVEGPQCQLCREGSFYLDPTN---PK--GCTKCFC- 1457
Query: 95 QFGSVREDCE 104
FG V DC+
Sbjct: 1458 -FG-VNTDCQ 1465
Score = 68 (29.0 bits), Expect = 5.4e-16, Sum P(2) = 5.4e-16
Identities = 22/85 (25%), Positives = 31/85 (36%)
Query: 110 CVCKPGVKGSKCNECLD----PNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCG-- 163
C C P G C C NK L C+P CNG +G+ ++C
Sbjct: 1654 CACPPDYTGDSCQGCRPGYYWDNKSLPVGRCVPCN----CNGHSNRCQDGSGICINCQHN 1709
Query: 164 -SGANREDCPSDAYCHITQNFARCC 187
+G + E C + Y + R C
Sbjct: 1710 TAGEHCERCQAGHYGNAIHGSCRVC 1734
>MGI|MGI:96743 [details] [associations]
symbol:Lamb1 "laminin B1" species:10090 "Mus musculus"
[GO:0005178 "integrin binding" evidence=IMP] [GO:0005201
"extracellular matrix structural constituent" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=IDA]
[GO:0005606 "laminin-1 complex" evidence=ISO;IDA] [GO:0005607
"laminin-2 complex" evidence=ISO] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IDA] [GO:0007566
"embryo implantation" evidence=IMP] [GO:0007611 "learning or
memory" evidence=NAS] [GO:0016477 "cell migration" evidence=IMP]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0030335 "positive
regulation of cell migration" evidence=ISO] [GO:0031012
"extracellular matrix" evidence=ISO] [GO:0031175 "neuron projection
development" evidence=ISO;IDA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=ISO] [GO:0042476
"odontogenesis" evidence=ISO] [GO:0043208 "glycosphingolipid
binding" evidence=IDA] [GO:0043256 "laminin complex" evidence=IDA]
[GO:0043257 "laminin-8 complex" evidence=ISO] [GO:0043259
"laminin-10 complex" evidence=ISO;IPI] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA] [GO:0070062 "extracellular
vesicular exosome" evidence=ISO] MGI:MGI:96743 GO:GO:0048471
GO:GO:0016477 GO:GO:0007155 PROSITE:PS00022 GO:GO:0007611
Reactome:REACT_127416 GO:GO:0005178 PROSITE:PS01186 GO:GO:0007162
GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0031175 GO:GO:0042476
GO:GO:0007566 InterPro:IPR009053 SUPFAM:SSF46579 GO:GO:0005201
GO:GO:0043208 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005606 GO:GO:0043259 eggNOG:NOG241384
OrthoDB:EOG44BB1B GO:GO:0005607 GO:GO:0043257
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 ChiTaRS:LAMB1 EMBL:M15525 EMBL:CR974423
EMBL:CT571245 EMBL:X05212 IPI:IPI00988644 PIR:A26413
UniGene:Mm.172674 PDB:4AQS PDBsum:4AQS ProteinModelPortal:P02469
SMR:P02469 MINT:MINT-1206337 STRING:P02469 PhosphoSite:P02469
PaxDb:P02469 PRIDE:P02469 Ensembl:ENSMUST00000169088
InParanoid:P02469 Bgee:P02469 CleanEx:MM_LAMB1-1
Genevestigator:P02469 GermOnline:ENSMUSG00000002900 Uniprot:P02469
Length = 1786
Score = 215 (80.7 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 49/137 (35%), Positives = 65/137 (47%)
Query: 7 SCLDSWYG-----CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVG 61
SCL + G C P+ LA G GC C CN S +C E T QC+C G G
Sbjct: 1055 SCLPNVIGQNCDRCAPNTWQLASG---TGC-GPCNCNAAHSFGPSCNEFTGQCQCMPGFG 1110
Query: 62 GLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
G C C+ +WG PD++ C C C G C+Q TG+CVC GV+G +C
Sbjct: 1111 GRTCSECQELFWG-------DPDVE-CRACDCDPRGIETPQCDQSTGQCVCVEGVEGPRC 1162
Query: 122 NECLDPNKKLGPNGCMP 138
++C + P+ C P
Sbjct: 1163 DKCTRGYSGVFPD-CTP 1178
Score = 208 (78.3 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 40/99 (40%), Positives = 55/99 (55%)
Query: 27 DNAGCPSTCGCNKLGSTE--DACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
D GC S C CN LG+ + C +T C CK+ V G +CD+C P +WGLS D
Sbjct: 451 DPYGCKS-CACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSN------D 503
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
+DGC C C G++ C + +G+C C P + G +CNE
Sbjct: 504 LDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNE 542
Score = 187 (70.9 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 48/145 (33%), Positives = 66/145 (45%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ GS C + QC+C+ V G C+RC PG +G + P+ GC C C
Sbjct: 773 CECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFG------FGPN--GCKPCDCH 824
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINL 154
GS C+ +TG+C C G+ +C+ CL P P+ C P CNG +
Sbjct: 825 LQGSASAFCDAITGQCHCFQGIYARQCDRCL-PGYWGFPS-CQPCQ----CNGHALDCDT 878
Query: 155 QTGVELDCG---SGANREDCPSDAY 176
TG L C +G N E C + Y
Sbjct: 879 VTGECLSCQDYTTGHNCERCLAGYY 903
Score = 180 (68.4 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 60/190 (31%), Positives = 79/190 (41%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P T GP+ GC C C+ GS C T QC C QG+ +CDRC PGYWG
Sbjct: 806 CAPG--TFGFGPN--GC-KPCDCHLQGSASAFCDAITGQCHCFQGIYARQCDRCLPGYWG 860
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNECL-----DPN 128
P C C C+ G DC+ +TG C+ C+ G C CL DP
Sbjct: 861 F-------PS---CQPCQCN--GHAL-DCDTVTGECLSCQDYTTGHNCERCLAGYYGDPI 907
Query: 129 KKLG----PNGCMPGME-----VKPCNGEPPVINLQTGVELDCGS-GANREDCPSDAYCH 178
G P C G + + C +P + LQ D G G+ +DC S + +
Sbjct: 908 IGSGDHCRPCPCPDGPDSGRQFARSCYQDP--VTLQLACVCDPGYIGSRCDDCASGFFGN 965
Query: 179 ITQNFARCCR 188
+F C+
Sbjct: 966 -PSDFGGSCQ 974
Score = 175 (66.7 bits), Expect = 9.8e-12, P = 9.8e-12
Identities = 43/125 (34%), Positives = 56/125 (44%)
Query: 35 CGCNKLGSTEDACI-ED------TEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
C CN LG+ ++ C D T QC C V G CDRC P W L+ + G
Sbjct: 1028 CVCNYLGTVKEHCNGSDCHCDKATGQCSCLPNVIGQNCDRCAPNTWQLASGT-------G 1080
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECL-----DPNKKLGPNGCMP-GME 141
C C C+ S C + TG+C C PG G C+EC DP+ + C P G+E
Sbjct: 1081 CGPCNCNAAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGIE 1140
Query: 142 VKPCN 146
C+
Sbjct: 1141 TPQCD 1145
Score = 162 (62.1 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 34/90 (37%), Positives = 48/90 (53%)
Query: 53 QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVR--EDCEQMTGRC 110
QC+CK V G +CD C+ G++ LS A D GC C C+ G++ C+ TG C
Sbjct: 425 QCRCKLHVEGERCDVCKEGFYDLS-----AEDPYGCKSCACNPLGTIPGGNPCDSETGYC 479
Query: 111 VCKPGVKGSKCNECLDPNKKLGPN--GCMP 138
CK V G +C++CL + L + GC P
Sbjct: 480 YCKRLVTGQRCDQCLPQHWGLSNDLDGCRP 509
Score = 157 (60.3 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 46/156 (29%), Positives = 67/156 (42%)
Query: 27 DNAGCPSTCGCN-KLGSTE-DACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYAP 83
D G C C+ + +T+ +AC ++T +C KC G C C+ GY+G +
Sbjct: 968 DFGGSCQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGDHCQLCQYGYYG----DALRQ 1023
Query: 84 DIDGCLKCGCSQFGSVREDC-------EQMTGRCVCKPGVKGSKCNECLDPNKKLGPN-G 135
D C KC C+ G+V+E C ++ TG+C C P V G C+ C +L G
Sbjct: 1024 D---CRKCVCNYLGTVKEHCNGSDCHCDKATGQCSCLPNVIGQNCDRCAPNTWQLASGTG 1080
Query: 136 CMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
C P + P N TG + C G C
Sbjct: 1081 CGP-CNCNAAHSFGPSCNEFTG-QCQCMPGFGGRTC 1114
Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 52/179 (29%), Positives = 67/179 (37%)
Query: 26 PDNAGCPST--CGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYA 82
P G PS C CN G D C T +C C+ G C+RC GY+G I S
Sbjct: 856 PGYWGFPSCQPCQCN--GHALD-CDTVTGECLSCQDYTTGHNCERCLAGYYGDPIIGSG- 911
Query: 83 PDIDGCLKCGCS-------QFG-SVREDCEQMTGRCVCKPGVKGSKCNECLDP---NKKL 131
D C C C QF S +D + CVC PG GS+C++C N
Sbjct: 912 ---DHCRPCPCPDGPDSGRQFARSCYQDPVTLQLACVCDPGYIGSRCDDCASGFFGNPSD 968
Query: 132 GPNGCMPGM-EVKPCNGEPPVINLQTGVELDCGSGANREDCPSDAYCHITQNFARCCRK 189
C P +P + +TG L C + C Y + + CRK
Sbjct: 969 FGGSCQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGDHCQLCQYGYYGDALRQDCRK 1027
Score = 121 (47.7 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 21/50 (42%), Positives = 25/50 (50%)
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP 138
L C C GS+ C+ G+C C+P V G CN C GPNGC P
Sbjct: 771 LACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPNGCKP 820
Score = 96 (38.9 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C P + L+ D GC C C+ G+ ++C ED+ QC C + G +C+ E GY+
Sbjct: 493 CLPQHWGLSNDLD--GC-RPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNEVESGYY 548
>RGD|1306311 [details] [associations]
symbol:Lamb1 "laminin, beta 1" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005178 "integrin
binding" evidence=ISO] [GO:0005201 "extracellular matrix structural
constituent" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005578 "proteinaceous extracellular matrix"
evidence=ISO] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0005605 "basal lamina" evidence=ISO] [GO:0005606 "laminin-1
complex" evidence=ISO] [GO:0005607 "laminin-2 complex"
evidence=ISO] [GO:0005615 "extracellular space" evidence=ISO]
[GO:0007162 "negative regulation of cell adhesion" evidence=ISO]
[GO:0007566 "embryo implantation" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016477 "cell migration"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0030335 "positive regulation of cell migration" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0031175
"neuron projection development" evidence=ISO] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=ISO]
[GO:0042476 "odontogenesis" evidence=ISO] [GO:0043208
"glycosphingolipid binding" evidence=ISO] [GO:0043256 "laminin
complex" evidence=ISO] [GO:0043257 "laminin-8 complex"
evidence=ISO] [GO:0043259 "laminin-10 complex" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0070062 "extracellular vesicular exosome" evidence=ISO]
RGD:1306311 GO:GO:0048471 GO:GO:0005615 GO:GO:0016477 GO:GO:0007162
GO:GO:0030335 GO:GO:0031012 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0042476 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0005201 GO:GO:0043208 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005606
GO:GO:0043259 OrthoDB:EOG44BB1B GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 IPI:IPI00365542
Ensembl:ENSRNOT00000008321 UCSC:RGD:1306311 ArrayExpress:D3ZQN7
Uniprot:D3ZQN7
Length = 1834
Score = 215 (80.7 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 49/137 (35%), Positives = 65/137 (47%)
Query: 7 SCLDSWYG-----CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVG 61
SCL + G C P LA G GC C CN + S +C E T QC+C G G
Sbjct: 1103 SCLPNVIGQNCDRCAPHTWQLASG---TGC-EPCNCNAVHSFGPSCNEFTGQCQCMPGFG 1158
Query: 62 GLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
G C C+ +WG PD++ C C C G C+Q TG+CVC GV+G +C
Sbjct: 1159 GRTCSECQELFWG-------DPDVE-CRACDCDPRGIETPQCDQSTGQCVCVEGVEGPRC 1210
Query: 122 NECLDPNKKLGPNGCMP 138
++C + P+ C P
Sbjct: 1211 DKCTRGYSGVFPD-CTP 1226
Score = 208 (78.3 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 40/99 (40%), Positives = 55/99 (55%)
Query: 27 DNAGCPSTCGCNKLGSTE--DACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
D GC S C CN LG+ + C +T C CK+ V G +CD+C P +WGLS D
Sbjct: 499 DPFGCKS-CACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSN------D 551
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
+DGC C C G++ C + +G+C C P + G +CNE
Sbjct: 552 LDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNE 590
Score = 192 (72.6 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 49/145 (33%), Positives = 67/145 (46%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ GS C + QC+C+ V G C+RC PG +G + P+ GC C C
Sbjct: 821 CECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFG------FGPN--GCKPCDCH 872
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINL 154
GSV C+ +TG+C C G+ +C+ CL P P+ C P CNG +
Sbjct: 873 LQGSVSAFCDAVTGQCHCFQGIYARQCDRCL-PGFWGFPS-CQPCQ----CNGHAEDCDT 926
Query: 155 QTGVELDCG---SGANREDCPSDAY 176
TG L C +G N E C + Y
Sbjct: 927 VTGECLSCQDYTTGHNCERCLAGYY 951
Score = 178 (67.7 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 59/189 (31%), Positives = 77/189 (40%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P T GP+ GC C C+ GS C T QC C QG+ +CDRC PG+WG
Sbjct: 854 CAPG--TFGFGPN--GC-KPCDCHLQGSVSAFCDAVTGQCHCFQGIYARQCDRCLPGFWG 908
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNECL-----DPN 128
P C C C+ G EDC+ +TG C+ C+ G C CL DP
Sbjct: 909 F-------PS---CQPCQCN--GHA-EDCDTVTGECLSCQDYTTGHNCERCLAGYYGDPI 955
Query: 129 KKLG----PNGCMPGME-----VKPCNGEPPVINLQTGVELDCGSGANREDCPSDAYCHI 179
G P C G + + C +P + LQ D G +R D + Y
Sbjct: 956 IGSGDHCRPCPCPDGPDSGRQFARSCYQDP--VTLQLACVCDPGYIGSRCDGCASGYFGN 1013
Query: 180 TQNFARCCR 188
+F C+
Sbjct: 1014 PSDFGGSCQ 1022
Score = 175 (66.7 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 42/125 (33%), Positives = 55/125 (44%)
Query: 35 CGCNKLGSTEDACI-------EDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
C CN LG+ + C + T QC C V G CDRC P W L+ + G
Sbjct: 1076 CVCNYLGTVREHCNGSDCHCDKTTGQCSCLPNVIGQNCDRCAPHTWQLASGT-------G 1128
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECL-----DPNKKLGPNGCMP-GME 141
C C C+ S C + TG+C C PG G C+EC DP+ + C P G+E
Sbjct: 1129 CEPCNCNAVHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGIE 1188
Query: 142 VKPCN 146
C+
Sbjct: 1189 TPQCD 1193
Score = 162 (62.1 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 34/90 (37%), Positives = 48/90 (53%)
Query: 53 QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVR--EDCEQMTGRC 110
QC+CK V G +CD C+ G++ LS A D GC C C+ G++ C+ TG C
Sbjct: 473 QCRCKLHVEGERCDVCKEGFYDLS-----AEDPFGCKSCACNPLGTIPGGNPCDSETGYC 527
Query: 111 VCKPGVKGSKCNECLDPNKKLGPN--GCMP 138
CK V G +C++CL + L + GC P
Sbjct: 528 YCKRLVTGQRCDQCLPQHWGLSNDLDGCRP 557
Score = 160 (61.4 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 47/156 (30%), Positives = 67/156 (42%)
Query: 27 DNAGCPSTCGCN-KLGSTE-DACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYAP 83
D G C C+ + +T+ +AC ++T +C KC G C C+ GY+G +
Sbjct: 1016 DFGGSCQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGDHCQFCQHGYYG----DALRQ 1071
Query: 84 DIDGCLKCGCSQFGSVREDC-------EQMTGRCVCKPGVKGSKCNECLDPNKKLGPN-G 135
D C KC C+ G+VRE C ++ TG+C C P V G C+ C +L G
Sbjct: 1072 D---CRKCVCNYLGTVREHCNGSDCHCDKTTGQCSCLPNVIGQNCDRCAPHTWQLASGTG 1128
Query: 136 CMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
C P + P N TG + C G C
Sbjct: 1129 CEP-CNCNAVHSFGPSCNEFTG-QCQCMPGFGGRTC 1162
Score = 121 (47.7 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 21/50 (42%), Positives = 25/50 (50%)
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP 138
L C C GS+ C+ G+C C+P V G CN C GPNGC P
Sbjct: 819 LACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPNGCKP 868
Score = 96 (38.9 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C P + L+ D GC C C+ G+ ++C ED+ QC C + G +C+ E GY+
Sbjct: 541 CLPQHWGLSNDLD--GC-RPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNEVESGYY 596
>UNIPROTKB|Q9H1U4 [details] [associations]
symbol:MEGF9 "Multiple epidermal growth factor-like domains
protein 9" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=NAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001368
SMART:SM00208 GO:GO:0016021 EMBL:CH471090 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 EMBL:AL138836 EMBL:AK295380 EMBL:AY358370
EMBL:AB011542 IPI:IPI00401283 RefSeq:NP_001073966.2
UniGene:Hs.741238 ProteinModelPortal:Q9H1U4 SMR:Q9H1U4
STRING:Q9H1U4 PhosphoSite:Q9H1U4 DMDM:116242627 PaxDb:Q9H1U4
PRIDE:Q9H1U4 DNASU:1955 Ensembl:ENST00000373930 GeneID:1955
KEGG:hsa:1955 UCSC:uc022bms.1 CTD:1955 GeneCards:GC09M123363
HGNC:HGNC:3234 HPA:HPA014319 MIM:604268 neXtProt:NX_Q9H1U4
eggNOG:NOG302694 HOGENOM:HOG000234343 HOVERGEN:HBG080442
InParanoid:Q9H1U4 OrthoDB:EOG43R3MN PhylomeDB:Q9H1U4
GenomeRNAi:1955 NextBio:7923 ArrayExpress:Q9H1U4 Bgee:Q9H1U4
CleanEx:HS_MEGF9 Genevestigator:Q9H1U4 GermOnline:ENSG00000106780
Uniprot:Q9H1U4
Length = 602
Score = 208 (78.3 bits), Expect = 6.4e-16, P = 6.4e-16
Identities = 51/169 (30%), Positives = 76/169 (44%)
Query: 24 QGPDNAGCPSTCGCNKLGSTE-DACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYA 82
+ P + C C+ +GS + C + T QC+C+ G GL C+ C+ G++ +Y
Sbjct: 193 EAPSSPPPEYVCNCSVVGSLNVNRCNQTTGQCECRPGYQGLHCETCKEGFY-----LNYT 247
Query: 83 PDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEV 142
+ C C CS G++ C +G+C CK GV GS C+ C D NGC+P
Sbjct: 248 SGL--CQPCDCSPHGALSIPCNS-SGKCQCKVGVIGSICDRCQDGYYGFSKNGCLPCQ-- 302
Query: 143 KPCNGEPPVINLQTGVELDC---GSGANREDCPSDAYCH--ITQNFARC 186
CN + TG L+C G + E+C Y T+ RC
Sbjct: 303 --CNNRSASCDALTGACLNCQENSKGNHCEECKEGFYQSPDATKECLRC 349
Score = 171 (65.3 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 51/171 (29%), Positives = 76/171 (44%)
Query: 29 AGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
+G C C+ G+ C + +C+CK GV G CDRC+ GY+G SK +GC
Sbjct: 248 SGLCQPCDCSPHGALSIPC-NSSGKCQCKVGVIGSICDRCQDGYYGFSK--------NGC 298
Query: 89 LKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCN- 146
L C C+ + C+ +TG C+ C+ KG+ C EC + + P+ + PC+
Sbjct: 299 LPCQCNNRSA---SCDALTGACLNCQENSKGNHCEECKEGFYQ-SPDATKECLRC-PCSA 353
Query: 147 ----GEPPVINLQTGVELD-CGSG---ANREDCPSDAYCHITQNFARCCRK 189
G + + + E D C G N C + Y NF CRK
Sbjct: 354 VTSTGSCSIKSSELEPECDQCKDGYIGPNCNKCENGYY-----NFDSICRK 399
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 33/111 (29%), Positives = 47/111 (42%)
Query: 24 QGPDNAGCPSTCGCNKLGSTEDACIEDTE---QC-KCKQGVGGLKCDRCEPGYWGLSKIS 79
Q PD C C+ + ST I+ +E +C +CK G G C++CE GY+ I
Sbjct: 338 QSPDATKECLRCPCSAVTSTGSCSIKSSELEPECDQCKDGYIGPNCNKCENGYYNFDSI- 396
Query: 80 SYAPDIDGCLKCGC-SQFGSVRED--CEQMTGRCV-CKPGVKGSKCNECLD 126
C KC C V+ C+ +G C+ C G C CL+
Sbjct: 397 --------CRKCQCHGHVDPVKTPKICKPESGECINCLHNTTGFWCENCLE 439
>FB|FBgn0261563 [details] [associations]
symbol:wb "wing blister" species:7227 "Drosophila
melanogaster" [GO:0005605 "basal lamina" evidence=ISS;NAS;IDA]
[GO:0005604 "basement membrane" evidence=ISS] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0007502 "digestive tract mesoderm development" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0008406
EMBL:AE014134 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0007476 Pfam:PF02210 HSSP:P00740 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GO:GO:0007502 GO:GO:0005606 FlyBase:FBgn0261563
ChiTaRS:wb RefSeq:NP_723870.1 ProteinModelPortal:Q8IP51 SMR:Q8IP51
STRING:Q8IP51 PRIDE:Q8IP51 EnsemblMetazoa:FBtr0302731 GeneID:43946
KEGG:dme:Dmel_CG42677 UCSC:CG15288-RB CTD:43946 InParanoid:Q8IP51
OMA:CNCNAYG GenomeRNAi:43946 NextBio:836431 ArrayExpress:Q8IP51
Bgee:Q8IP51 Uniprot:Q8IP51
Length = 3375
Score = 217 (81.4 bits), Expect = 6.9e-16, P = 6.9e-16
Identities = 48/148 (32%), Positives = 61/148 (41%)
Query: 10 DSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCE 69
D W PD + C C C+ +GS C + T QC C V G +CD+C
Sbjct: 1128 DEWE-LVPDTED-PNSESTVACEE-CHCSSVGSLSSDCDKRTGQCACLANVTGRRCDKCR 1184
Query: 70 PGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNK 129
PG+W L+ +GC C C GS +C TG+C CK GV G CNEC +
Sbjct: 1185 PGHWNLTAG-------EGCRDCRCDPHGSRGHECNPWTGQCDCKIGVGGQHCNECTEGFF 1237
Query: 130 KLGPNGCMPGMEVKPCNGEPPVINLQTG 157
GC C E V + G
Sbjct: 1238 GFSTEGCQ---RCSACRSEGQVCDPHNG 1262
Score = 187 (70.9 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 42/118 (35%), Positives = 53/118 (44%)
Query: 10 DSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCE 69
+ W+ C K G GC C C+ GS C QC CK G KCD C+
Sbjct: 996 EGWH--CERCKLGYWGDPAVGC-DPCHCHTEGSESGLCDSTDGQCLCKPRYAGQKCDECD 1052
Query: 70 PGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED-CEQMTGRCVCKPGVKGSKCNECLD 126
GY + C C C GS+ +D C+ TG+C CK GV G+KC+EC D
Sbjct: 1053 VGYANVEL---------RCPSCNCDPLGSLVQDRCDPHTGQCHCKEGVMGAKCHECQD 1101
Score = 176 (67.0 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 46/136 (33%), Positives = 61/136 (44%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE-QCKCKQGV 60
G + C + +YG P++ G CP T N+ + D E C CK G
Sbjct: 1695 GDHCHQCAEGFYGD-PNSP---HGCQACPCPET---NR-NFARGCNVWDGEVSCVCKPGY 1746
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSK 120
G C+RC+ GY+G Y P+ C C C G E C+ TGRC C+ GV G K
Sbjct: 1747 TGRLCERCQAGYFG--DPMRY-PNTT-CQPCNCHPDGIQTEGCDVETGRCYCREGVTGLK 1802
Query: 121 CNECLDPNKKLGPNGC 136
C++C L NGC
Sbjct: 1803 CDKCQAERHHLVDNGC 1818
Score = 170 (64.9 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 42/115 (36%), Positives = 55/115 (47%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC C C+ +GS C QC+C++G G KCD C GY+G Y P+ C
Sbjct: 1290 GCRE-CECDHIGSIGQQCSTGDGQCQCREGYSGRKCDTCAIGYFG------Y-PE---CR 1338
Query: 90 KCGCSQFGSVRE-D----CEQMTGRCVCKPGVKGSKCNECLDPNKKLG---PNGC 136
+CGC GS + D C+ G+C CK V G KC+ C+ L P GC
Sbjct: 1339 RCGCDAEGSFTQADGSIACDS-NGQCPCKSLVVGLKCDTCMQSTFGLSAQNPEGC 1392
Score = 166 (63.5 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 39/112 (34%), Positives = 51/112 (45%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P + L G GC C C+ GS C T QC CK GVGG C+ C G++G
Sbjct: 1183 CRPGHWNLTAGE---GCRD-CRCDPHGSRGHECNPWTGQCDCKIGVGGQHCNECTEGFFG 1238
Query: 75 LSKISSYAPDIDGCLKCG-CSQFGSVREDCEQMTGRCVCKPGVKGSKCNECL 125
S +GC +C C G V C+ GRC+C +G C +C+
Sbjct: 1239 FST--------EGCQRCSACRSEGQV---CDPHNGRCICPKFTRGLGCGQCV 1279
Score = 155 (59.6 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 33/90 (36%), Positives = 42/90 (46%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C CN ST C D C C +G G C+ C PGY+G D C +C C
Sbjct: 506 CSCNPARST-GGCQSDGGSCNCLEGFQGKNCEECAPGYYG-----------DDCKRCECD 553
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
+ GS+ +G C CK V+GS C+EC
Sbjct: 554 ERGSLGST-GSCSGVCQCKLNVEGSTCSEC 582
Score = 153 (58.9 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 41/121 (33%), Positives = 53/121 (43%)
Query: 13 YGC--CPDNKT--LAQGPDNA--GCPSTCG--CNKLGSTEDACIEDTEQC-KCKQGVGGL 63
Y C CP+ T Q D+ G P G C + C T +C C+ G
Sbjct: 939 YICTQCPEGYTGDHCQVCDDGYFGNPRQPGSSCQRCDCAGGPCNVTTGECITCRGNTEGW 998
Query: 64 KCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
C+RC+ GYWG P + GC C C GS C+ G+C+CKP G KC+E
Sbjct: 999 HCERCKLGYWG-------DPAV-GCDPCHCHTEGSESGLCDSTDGQCLCKPRYAGQKCDE 1050
Query: 124 C 124
C
Sbjct: 1051 C 1051
Score = 153 (58.9 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 47/173 (27%), Positives = 70/173 (40%)
Query: 27 DNAGCPSTCGCNKLGSTEDACIEDTEQCK-CKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
D G + C CN G + D C +T C+ C+ GG C +C G++G +P
Sbjct: 1662 DLIGRAAPCHCN--GRSSD-CDRETGVCQNCRGNTGGDHCHQCAEGFYG----DPNSPH- 1713
Query: 86 DGCLKCGCSQFG-SVREDCEQMTGR--CVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEV 142
GC C C + + C G CVCKPG G C C G P
Sbjct: 1714 -GCQACPCPETNRNFARGCNVWDGEVSCVCKPGYTGRLCERC--QAGYFGDPMRYPNTTC 1770
Query: 143 KPCNGEPPVINLQTGVELDCG--------SGANREDCPSDAYCHITQNFARCC 187
+PCN P I + G +++ G +G + C ++ + H+ N + C
Sbjct: 1771 QPCNCHPDGIQTE-GCDVETGRCYCREGVTGLKCDKCQAERH-HLVDNGCKIC 1821
Score = 152 (58.6 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 31/100 (31%), Positives = 42/100 (42%)
Query: 25 GPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
G GC C G C +C C + GL C +C PG WG +
Sbjct: 1238 GFSTEGCQRCSACRSEGQV---CDPHNGRCICPKFTRGLGCGQCVPGTWG------WQAR 1288
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
+ GC +C C GS+ + C G+C C+ G G KC+ C
Sbjct: 1289 L-GCRECECDHIGSIGQQCSTGDGQCQCREGYSGRKCDTC 1327
Score = 151 (58.2 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 50/162 (30%), Positives = 71/162 (43%)
Query: 31 CPSTCGCNKLGS-TEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
CPS C C+ LGS +D C T QC CK+GV G KC C+ GY+G++ ++ Y D L
Sbjct: 1062 CPS-CNCDPLGSLVQDRCDPHTGQCHCKEGVMGAKCHECQDGYFGMNAVA-YRMDDLAAL 1119
Query: 90 KCGCSQFGSVRE---DCE----QMTGRCV-CKPGVKGSKCNECLDPNKKLGPNGCMPGME 141
+ E D E + T C C GS ++C +K+ G C+ +
Sbjct: 1120 RQNSDSDDDEWELVPDTEDPNSESTVACEECHCSSVGSLSSDC---DKRTGQCACLANVT 1176
Query: 142 VKPCNG-EPPVINLQTGVEL-DCGS---GANREDC-PSDAYC 177
+ C+ P NL G DC G+ +C P C
Sbjct: 1177 GRRCDKCRPGHWNLTAGEGCRDCRCDPHGSRGHECNPWTGQC 1218
Score = 123 (48.4 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 33/113 (29%), Positives = 49/113 (43%)
Query: 15 CCP--DNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCK-CKQGVGGLKCDRCEPG 71
CCP ++ G + C C + T D + D C+ C G++C+ CE G
Sbjct: 434 CCPLFQDRPYQMGGECEICQ--CYGHAESCTYDPFL-DKGICQSCSNNTAGIECEFCEMG 490
Query: 72 YWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
++ ++ AP D CL C C+ S C+ G C C G +G C EC
Sbjct: 491 FY--RELD--APLTDPCLPCSCNPARSTG-GCQSDGGSCNCLEGFQGKNCEEC 538
Score = 66 (28.3 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 24/88 (27%), Positives = 34/88 (38%)
Query: 109 RCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVK----PCNGEPPVINLQTGVELDCGS 164
+C+C G G C C K++ N + K PCNG +LQ+G DC
Sbjct: 814 QCLCPAGYTGLSCEGCAFGFKRIYENTSDHQILSKCIPCPCNGHSNSCDLQSGNCGDCMH 873
Query: 165 ---GANREDCPSDAYCHITQNFARCCRK 189
G E C Y + Q C++
Sbjct: 874 NTFGDRCERCQLGYYGNPLQGTPNDCKR 901
Score = 37 (18.1 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 141 EVKPCNGEPPVINL 154
E++ NG P V++L
Sbjct: 2891 EIRNLNGNPTVVSL 2904
Score = 37 (18.1 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 11/51 (21%), Positives = 19/51 (37%)
Query: 135 GCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSDAYCHITQNFAR 185
GCM ++V +P + GVE C + + + Y + R
Sbjct: 2745 GCMKDVQVNGETYDPLESSSYYGVEPSCKNMITKAGFSGNGYLELPSQSLR 2795
>MGI|MGI:99912 [details] [associations]
symbol:Lama2 "laminin, alpha 2" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=ISO;IDA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007411 "axon guidance" evidence=IGI]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0032224 "positive
regulation of synaptic transmission, cholinergic" evidence=IMP]
[GO:0042383 "sarcolemma" evidence=IDA] [GO:0043197 "dendritic
spine" evidence=ISO] [GO:0045995 "regulation of embryonic
development" evidence=IEA] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 MGI:MGI:99912 GO:GO:0007411 GO:GO:0030155
GO:GO:0007155 GO:GO:0042383 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0005605 PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 HOGENOM:HOG000293201
HOVERGEN:HBG052298 GO:GO:0005606 eggNOG:COG0419 EMBL:U12147
EMBL:X69869 EMBL:S75315 IPI:IPI00309999 PIR:I49077
UniGene:Mm.256087 PDB:1DYK PDB:1OKQ PDB:1QU0 PDB:2WJS PDBsum:1DYK
PDBsum:1OKQ PDBsum:1QU0 PDBsum:2WJS ProteinModelPortal:Q60675
SMR:Q60675 STRING:Q60675 PhosphoSite:Q60675 PaxDb:Q60675
PRIDE:Q60675 UCSC:uc007esf.1 ChiTaRS:LAMA2 EvolutionaryTrace:Q60675
CleanEx:MM_LAMA2 Genevestigator:Q60675
GermOnline:ENSMUSG00000019899 Uniprot:Q60675
Length = 3106
Score = 216 (81.1 bits), Expect = 8.0e-16, P = 8.0e-16
Identities = 58/163 (35%), Positives = 77/163 (47%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P+ L G GC C CN GS C E + QC C+ GV G KCDRC GY+
Sbjct: 947 CKPETFGLQLG---RGC-LPCNCNSFGSKSFDC-EASGQCWCQPGVAGKKCDRCAHGYFN 1001
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN 134
+ GC+ C CS G+ +C+ TG+C+C P G KC+ECL PN G +
Sbjct: 1002 FQE--------GGCIACDCSHLGN---NCDPKTGQCICPPNTTGEKCSECL-PNT-WG-H 1047
Query: 135 GCMPGMEVKPCN--GE-PPVINLQTGVELDCG---SGANREDC 171
+ G +V C+ G N+ TG + C SG +C
Sbjct: 1048 SIVTGCKVCNCSTVGSLASQCNVNTG-QCSCHPKFSGMKCSEC 1089
Score = 171 (65.3 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 43/133 (32%), Positives = 59/133 (44%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE-------- 52
+GI ++C+D ++ + P+ C C+ GS + C++D +
Sbjct: 382 AGINCETCVDGFF------RPKGVSPNYPRPCQPCHCDPTGSLSEVCVKDEKYAQRGLKP 435
Query: 53 -QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV 111
C CK G GG+ CDRC GY G Y PD C C CS GS ED G C
Sbjct: 436 GSCHCKTGFGGVNCDRCVRGYHG------Y-PD---CQPCNCSGLGSTNED--PCVGPCS 483
Query: 112 CKPGVKGSKCNEC 124
CK V+G C+ C
Sbjct: 484 CKENVEGEDCSRC 496
Score = 170 (64.9 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 39/125 (31%), Positives = 56/125 (44%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLG-STEDACIEDTEQCKCKQG 59
+G + + C +YG + L CP N S +ED C +G
Sbjct: 1440 AGDFCERCALGYYGIV---RGLPNDCQPCACPLISPSNNFSPSCVLEGLEDYRCTACPRG 1496
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGS 119
G C+RC PGY G S +P C +C C +GS+ C+++TG C C+PG G
Sbjct: 1497 YEGQYCERCAPGYTG----SPSSPG-GSCQECECDPYGSLPVPCDRVTGLCTCRPGATGR 1551
Query: 120 KCNEC 124
KC+ C
Sbjct: 1552 KCDGC 1556
Score = 165 (63.1 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 40/116 (34%), Positives = 52/116 (44%)
Query: 26 PDNAGCPSTCGCNKLGSTEDACIEDTEQCK-CKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
P + P C N S +C + C CK G G C+ C GY+G A +
Sbjct: 854 PGGSCQPCQCNDNLDYSIPGSCDSLSGSCLICKPGTTGRYCELCADGYFG------DAVN 907
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPN--KKLGPNGCMP 138
C C C GS EDC TG+C C+P V+G C+EC +LG GC+P
Sbjct: 908 TKNCQPCRCDINGSFSEDCHTRTGQCECRPNVQGRHCDECKPETFGLQLG-RGCLP 962
Score = 155 (59.6 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 34/113 (30%), Positives = 47/113 (41%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC C C+ +GS C +T QC C G+KC C G+W + + G
Sbjct: 1052 GC-KVCNCSTVGSLASQCNVNTGQCSCHPKFSGMKCSECSRGHWNYPLCTLCDCFLPGTD 1110
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC------LDPNKKLGPNGC 136
C + + C TG+C CK V+G C+ C LD LG + C
Sbjct: 1111 ATTCD-LETRKCSCSDQTGQCSCKVNVEGVHCDRCRPGKFGLDAKNPLGCSSC 1162
Score = 135 (52.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 41/148 (27%), Positives = 56/148 (37%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ---C-KCK 57
G Y CL +YG + + CP N T C D C +C
Sbjct: 778 GPYCNECLPGFYG--DPTRGSPEDCQPCACPLNIPSNNFSPT---CHLDRSLGLICDECP 832
Query: 58 QGVGGLKCDRCEPGYWGLSKISSYAPDIDG--CLKCGCSQF--GSVREDCEQMTGRC-VC 112
G G +C+RC GY+G P + G C C C+ S+ C+ ++G C +C
Sbjct: 833 IGYTGPRCERCAEGYFG-------QPSVPGGSCQPCQCNDNLDYSIPGSCDSLSGSCLIC 885
Query: 113 KPGVKGSKCNECLDP--NKKLGPNGCMP 138
KPG G C C D + C P
Sbjct: 886 KPGTTGRYCELCADGYFGDAVNTKNCQP 913
Score = 129 (50.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 41/136 (30%), Positives = 54/136 (39%)
Query: 43 TEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED 102
T+ D E C+C G G C+ C P + ++ + I C C C F E
Sbjct: 709 TDRRIATDVEVCQCPPGYSGSSCETCWPRHRRVN--GTIFGGI--CEPCQC--FAHA-EA 761
Query: 103 CEQMTGRCV-CKPGVKGSKCNECL-----DPNKKLGPNGCMPGMEVKPCNGEPPVINLQT 156
C+ +TG C+ CK G CNECL DP + P C P C P N
Sbjct: 762 CDDITGECLNCKDHTGGPYCNECLPGFYGDPTRG-SPEDCQPCA----CPLNIPSNNFSP 816
Query: 157 GVELDCGSGANREDCP 172
LD G ++CP
Sbjct: 817 TCHLDRSLGLICDECP 832
>UNIPROTKB|F1NCH8 [details] [associations]
symbol:F1NCH8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA]
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GeneTree:ENSGT00690000102103 OMA:QRGRRCE
EMBL:AADN02026542 EMBL:AADN02026543 IPI:IPI00589777
Ensembl:ENSGALT00000006123 Uniprot:F1NCH8
Length = 1444
Score = 212 (79.7 bits), Expect = 8.8e-16, P = 8.8e-16
Identities = 40/95 (42%), Positives = 51/95 (53%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC S C C+ +GS + C T QC C+ GV GL+CDRCE G++G S GC
Sbjct: 917 GCKS-CECHPVGSQDSGCHAVTGQCSCQPGVTGLRCDRCEHGFFGFSA--------RGCR 967
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C CS GS C + C+C+PG G KC+ C
Sbjct: 968 ACNCSPLGSASAQCHE-NSTCLCRPGFVGYKCDRC 1001
Score = 183 (69.5 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 46/137 (33%), Positives = 57/137 (41%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTE--DACIEDTEQCKCKQGVGGLKCDRCEPGY 72
C P A P AG ++C CN GS + C T QC C V G C C+ GY
Sbjct: 850 CRPGFYGDALAPSPAGKCASCNCNPDGSALGLEGCDPGTGQCLCLPHVLGRTCGLCQHGY 909
Query: 73 WGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLG 132
+GL GC C C GS C +TG+C C+PGV G +C+ C
Sbjct: 910 YGLQAAV-------GCKSCECHPVGSQDSGCHAVTGQCSCQPGVTGLRCDRCEHGFFGFS 962
Query: 133 PNGCMPGMEVKPCNGEP 149
GC + CN P
Sbjct: 963 ARGC------RACNCSP 973
Score = 171 (65.3 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 45/143 (31%), Positives = 60/143 (41%)
Query: 2 GIYLKSCLDSWYG--CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQG 59
G + ++C D+ G C + + A C C C+ G + + C CK
Sbjct: 349 GGHCRNCRDNTAGPRCEQCRQNHYRWEQQAAC-QPCHCHPAGVPLRPQCDSSGTCTCKAN 407
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGS 119
V G KC+RC+ GY LS+ GC C C GSV C+ TG C CK V+G
Sbjct: 408 VTGWKCERCKDGYHSLSE--------GGCRPCTCDPAGSVGT-CDPNTGHCTCKERVEGH 458
Query: 120 KCNEC------LDPNKKLGPNGC 136
CN C L P +G C
Sbjct: 459 LCNRCQPGWFNLQPYNPIGCTSC 481
Score = 147 (56.8 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 55/188 (29%), Positives = 73/188 (38%)
Query: 8 CLDSWYGCCPDNKTLAQ-GPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKC 65
C D ++G L Q GP P C N + C + +C +C G +C
Sbjct: 793 CDDGFFG-----DPLGQRGPVRPCVPCQCHGNVDLNAVGNCDSVSGRCLRCLHNTTGEQC 847
Query: 66 DRCEPGYWGLSKISSYAPDIDG-CLKCGCSQFGSVR--EDCEQMTGRCVCKPGVKGSKCN 122
+C PG++G + AP G C C C+ GS E C+ TG+C+C P V G C
Sbjct: 848 QQCRPGFYG----DALAPSPAGKCASCNCNPDGSALGLEGCDPGTGQCLCLPHVLGRTCG 903
Query: 123 ECLDPNKKL-GPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSDAYCHITQ 181
C L GC E P + + TG + C G C D H
Sbjct: 904 LCQHGYYGLQAAVGCK-SCECHPVGSQDSGCHAVTG-QCSCQPGVTGLRC--DRCEHGFF 959
Query: 182 NF-ARCCR 188
F AR CR
Sbjct: 960 GFSARGCR 967
Score = 140 (54.3 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 37/116 (31%), Positives = 49/116 (42%)
Query: 52 EQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV 111
E+C C G C+ C PG+ I P + C+ C C+Q G DCE ++G C
Sbjct: 675 EECTCPPSYTGSFCESCAPGF--KRDIPFGGPFVT-CVPCTCNQHG----DCEPLSGHCR 727
Query: 112 CKPGVKGSKCNECLDP----NKKLG-PNGCMPGMEVKPCNGEPPVINLQTGVELDC 162
C +G C C P N G P+ C P PC G P L + E+ C
Sbjct: 728 CLHNTEGPSCERC-SPGFYGNPFTGHPDDCKPC----PCPGRSPCTQLPSSGEVVC 778
Score = 128 (50.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 38/118 (32%), Positives = 51/118 (43%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C CN+ G E + C+C G C+RC PG++G + + D C C C
Sbjct: 711 CTCNQHGDCEPL----SGHCRCLHNTEGPSCERCSPGFYG----NPFTGHPDDCKPCPCP 762
Query: 95 QFGSVREDCEQM--TGRCVCK---PGVKGSKCNECLDP--NKKLGPNGCMPGMEVKPC 145
G R C Q+ +G VC PG +G +C C D LG G P V+PC
Sbjct: 763 --G--RSPCTQLPSSGEVVCTHCPPGQRGKRCELCDDGFFGDPLGQRG--P---VRPC 811
Score = 122 (48.0 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 32/115 (27%), Positives = 48/115 (41%)
Query: 35 CGCNKLGSTEDACIEDTE---------QCK-CKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
C C+ G +E+ C D E C+ C+ G +C++C ++ + ++
Sbjct: 327 CDCS--GRSEE-CFYDAELFRRTGRGGHCRNCRDNTAGPRCEQCRQNHYRWEQQAA---- 379
Query: 85 IDGCLKCGCSQFG-SVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP 138
C C C G +R C+ +G C CK V G KC C D L GC P
Sbjct: 380 ---CQPCHCHPAGVPLRPQCDS-SGTCTCKANVTGWKCERCKDGYHSLSEGGCRP 430
Score = 116 (45.9 bits), Expect = 0.00045, P = 0.00045
Identities = 32/91 (35%), Positives = 44/91 (48%)
Query: 6 KSCLDSWYGC--CPDN-KTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGG 62
K+ + W C C D +L++G GC C C+ GS C +T C CK+ V G
Sbjct: 405 KANVTGWK-CERCKDGYHSLSEG----GC-RPCTCDPAGSV-GTCDPNTGHCTCKERVEG 457
Query: 63 LKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C+RC+PG++ L Y P GC C C
Sbjct: 458 HLCNRCQPGWFNLQP---YNPI--GCTSCFC 483
>UNIPROTKB|P07942 [details] [associations]
symbol:LAMB1 "Laminin subunit beta-1" species:9606 "Homo
sapiens" [GO:0005178 "integrin binding" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0007566
"embryo implantation" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0043257
"laminin-8 complex" evidence=IDA;TAS] [GO:0005607 "laminin-2
complex" evidence=IDA;TAS] [GO:0031175 "neuron projection
development" evidence=IDA] [GO:0042476 "odontogenesis"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA;TAS]
[GO:0005198 "structural molecule activity" evidence=NAS]
[GO:0005606 "laminin-1 complex" evidence=IDA;TAS;IPI] [GO:0030335
"positive regulation of cell migration" evidence=IDA] [GO:0043259
"laminin-10 complex" evidence=IDA] [GO:0005615 "extracellular
space" evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IDA] [GO:0007155 "cell adhesion"
evidence=TAS] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IDA]
[GO:0031012 "extracellular matrix" evidence=ISS] GO:GO:0048471
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
GO:GO:0005615 GO:GO:0016477 GO:GO:0070062 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0034446 Pathway_Interaction_DB:amb2_neutrophils_pathway
GO:GO:0042476 DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031
EMBL:CH236947 GO:GO:0050679 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 DrugBank:DB00015 GO:GO:0005201 GO:GO:0043208
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0005606 GO:GO:0043259 eggNOG:NOG241384 HOGENOM:HOG000007552
GO:GO:0005607 GO:GO:0043257 KO:K05636 InterPro:IPR013015
PROSITE:PS51116 EMBL:M61951 EMBL:M58147 EMBL:M61917 EMBL:M61918
EMBL:M61921 EMBL:M61922 EMBL:M61923 EMBL:M61924 EMBL:M61925
EMBL:M61926 EMBL:M61927 EMBL:M61928 EMBL:M61929 EMBL:M61930
EMBL:M61931 EMBL:M61932 EMBL:M61933 EMBL:M61934 EMBL:M61935
EMBL:M61936 EMBL:M61938 EMBL:M61939 EMBL:M61940 EMBL:M61941
EMBL:M61942 EMBL:M61943 EMBL:M61944 EMBL:M61945 EMBL:M61946
EMBL:M61947 EMBL:M61948 EMBL:M61949 EMBL:M61950 EMBL:M55370
EMBL:M55378 EMBL:M55365 EMBL:M55371 EMBL:M55372 EMBL:M55373
EMBL:M55374 EMBL:M55375 EMBL:M55376 EMBL:M55344 EMBL:M55345
EMBL:M55346 EMBL:M55347 EMBL:M55348 EMBL:M55349 EMBL:M55350
EMBL:M55351 EMBL:M55352 EMBL:M55353 EMBL:M55355 EMBL:M55356
EMBL:M55357 EMBL:M55358 EMBL:M55359 EMBL:M55360 EMBL:M55361
EMBL:M55362 EMBL:M55363 EMBL:M55364 EMBL:M55366 EMBL:M55367
EMBL:M55368 EMBL:M55369 EMBL:M61916 EMBL:BC113455 EMBL:M20206
IPI:IPI00013976 PIR:S13547 RefSeq:NP_002282.2 UniGene:Hs.650585
ProteinModelPortal:P07942 SMR:P07942 IntAct:P07942
MINT:MINT-2860329 STRING:P07942 PhosphoSite:P07942 DMDM:126366
PaxDb:P07942 PRIDE:P07942 Ensembl:ENST00000222399 GeneID:3912
KEGG:hsa:3912 UCSC:uc003vev.2 CTD:3912 GeneCards:GC07M107564
H-InvDB:HIX0025323 HGNC:HGNC:6486 HPA:CAB004256 HPA:HPA004056
HPA:HPA004132 MIM:150240 neXtProt:NX_P07942 PharmGKB:PA30275
HOVERGEN:HBG052301 PhylomeDB:P07942 ChiTaRS:LAMB1 GenomeRNAi:3912
NextBio:15367 ArrayExpress:P07942 Bgee:P07942 CleanEx:HS_LAMB1
Genevestigator:P07942 GermOnline:ENSG00000091136 Uniprot:P07942
Length = 1786
Score = 213 (80.0 bits), Expect = 8.9e-16, P = 8.9e-16
Identities = 45/124 (36%), Positives = 60/124 (48%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P+ LA G GC C CN S +C E T QC+C G GG C C+ +WG
Sbjct: 1068 CAPNTWQLASG---TGC-DPCNCNAAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWG 1123
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN 134
PD++ C C C G C+Q TG+CVC GV+G +C++C + P+
Sbjct: 1124 -------DPDVE-CRACDCDPRGIETPQCDQSTGQCVCVEGVEGPRCDKCTRGYSGVFPD 1175
Query: 135 GCMP 138
C P
Sbjct: 1176 -CTP 1178
Score = 206 (77.6 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 41/103 (39%), Positives = 57/103 (55%)
Query: 27 DNAGCPSTCGCNKLGSTE--DACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
D GC S C CN LG+ + C +T C CK+ V G CD+C P +WGLS D
Sbjct: 451 DPFGCKS-CACNPLGTIPGGNPCDSETGHCYCKRLVTGQHCDQCLPEHWGLSN------D 503
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDP 127
+DGC C C G++ C +G+C C+P + G +CNE ++P
Sbjct: 504 LDGCRPCDCDLGGALNNSCFAESGQCSCRPHMIGRQCNE-VEP 545
Score = 190 (71.9 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 50/145 (34%), Positives = 65/145 (44%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ GS C + QC+C+ V G C+RC PG +G + P GC C C
Sbjct: 773 CECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFG------FGPS--GCKPCECH 824
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINL 154
GSV C +TG+C C GV +C+ CL P P+ C P CNG +
Sbjct: 825 LQGSVNAFCNPVTGQCHCFQGVYARQCDRCL-PGHWGFPS-CQPCQ----CNGHADDCDP 878
Query: 155 QTGVELDCGS---GANREDCPSDAY 176
TG L+C G N E C + Y
Sbjct: 879 VTGECLNCQDYTMGHNCERCLAGYY 903
Score = 177 (67.4 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 58/175 (33%), Positives = 74/175 (42%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P T GP +GC C C+ GS C T QC C QGV +CDRC PG+WG
Sbjct: 806 CAPG--TFGFGP--SGC-KPCECHLQGSVNAFCNPVTGQCHCFQGVYARQCDRCLPGHWG 860
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNECL-----DPN 128
P C C C+ G +DC+ +TG C+ C+ G C CL DP
Sbjct: 861 F-------PS---CQPCQCN--GHA-DDCDPVTGECLNCQDYTMGHNCERCLAGYYGDPI 907
Query: 129 KKLG----PNGCMPGME-----VKPCNGEPPVINLQTGVELDCGS-GANREDCPS 173
G P C G + + C +P + LQ D G G+ +DC S
Sbjct: 908 IGSGDHCRPCPCPDGPDSGRQFARSCYQDP--VTLQLACVCDPGYIGSRCDDCAS 960
Score = 175 (66.7 bits), Expect = 9.8e-12, P = 9.8e-12
Identities = 42/125 (33%), Positives = 56/125 (44%)
Query: 35 CGCNKLGSTED-------ACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
C CN LG+ ++ C + T QC C V G CDRC P W L+ + G
Sbjct: 1028 CVCNYLGTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGT-------G 1080
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECL-----DPNKKLGPNGCMP-GME 141
C C C+ S C + TG+C C PG G C+EC DP+ + C P G+E
Sbjct: 1081 CDPCNCNAAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGIE 1140
Query: 142 VKPCN 146
C+
Sbjct: 1141 TPQCD 1145
Score = 163 (62.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 40/117 (34%), Positives = 55/117 (47%)
Query: 35 CGCNKLGS-TEDACIEDTE--------QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
C C+ GS E C T+ QC+CK V G CD C+ G++ LS + D
Sbjct: 398 CTCDPAGSQNEGICDSYTDFSTGLIAGQCRCKLNVEGEHCDVCKEGFYDLS-----SEDP 452
Query: 86 DGCLKCGCSQFGSVR--EDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN--GCMP 138
GC C C+ G++ C+ TG C CK V G C++CL + L + GC P
Sbjct: 453 FGCKSCACNPLGTIPGGNPCDSETGHCYCKRLVTGQHCDQCLPEHWGLSNDLDGCRP 509
Score = 139 (54.0 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 55/182 (30%), Positives = 74/182 (40%)
Query: 26 PDNAGCPST--CGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYA 82
P + G PS C CN G +D C T +C C+ G C+RC GY+G I S
Sbjct: 856 PGHWGFPSCQPCQCN--GHADD-CDPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGSG- 911
Query: 83 PDIDGCLKCGCS-------QFG-SVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN 134
D C C C QF S +D + CVC PG GS+C++C + G N
Sbjct: 912 ---DHCRPCPCPDGPDSGRQFARSCYQDPVTLQLACVCDPGYIGSRCDDCA--SGYFG-N 965
Query: 135 GCMPGMEVKPC---NG----EPPVINLQTGVELDCGSGANREDCPSDAYCHITQNFARCC 187
G +PC N +P + +TG L C E C + + + C
Sbjct: 966 PSEVGGSCQPCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQFCRFGYYGDALQQDC 1025
Query: 188 RK 189
RK
Sbjct: 1026 RK 1027
Score = 117 (46.2 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 27/83 (32%), Positives = 33/83 (39%)
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGE 148
L C C GS+ C+ G+C C+P V G CN C GP+GC P E
Sbjct: 771 LACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPSGCKP-CECHLQGSV 829
Query: 149 PPVINLQTGVELDCGSGANREDC 171
N TG + C G C
Sbjct: 830 NAFCNPVTG-QCHCFQGVYARQC 851
Score = 102 (41.0 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C P++ L+ D GC C C+ G+ ++C ++ QC C+ + G +C+ EPGY+
Sbjct: 493 CLPEHWGLSNDLD--GC-RPCDCDLGGALNNSCFAESGQCSCRPHMIGRQCNEVEPGYY 548
>ZFIN|ZDB-GENE-021226-1 [details] [associations]
symbol:lamb1a "laminin, beta 1a" species:7955 "Danio
rerio" [GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0050908
"detection of light stimulus involved in visual perception"
evidence=IMP] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
ZFIN:ZDB-GENE-021226-1 GO:GO:0048471 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0007517 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 HSSP:P02468
GO:GO:0050908 GO:GO:0031290 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0007634 HOGENOM:HOG000007552
KO:K05636 InterPro:IPR013015 PROSITE:PS51116 HOVERGEN:HBG052301
EMBL:AF468049 IPI:IPI00485526 RefSeq:NP_775382.1 UniGene:Dr.76526
ProteinModelPortal:Q8JHV7 STRING:Q8JHV7 PRIDE:Q8JHV7 GeneID:286830
KEGG:dre:286830 CTD:286830 NextBio:20806481 Bgee:Q8JHV7
Uniprot:Q8JHV7
Length = 1785
Score = 201 (75.8 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 52/145 (35%), Positives = 63/145 (43%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ GS C QC+C+ V G CDRC P + + P GC C CS
Sbjct: 769 CQCDPQGSLSTVCDPSGGQCQCRPNVVGRNCDRCAPATF------LFXPQ--GCRPCDCS 820
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINL 154
GSV C + TG+C C G G +C+ CL P PN C P CNG +
Sbjct: 821 PEGSVHSYCHEATGQCECIAGAYGRQCDRCL-PGYWGFPN-CRPCT----CNGHAEQCDP 874
Query: 155 QTGVELDCG---SGANREDCPSDAY 176
QTG L C +G N E C Y
Sbjct: 875 QTGQCLSCRDHTTGHNCERCLGGYY 899
Score = 195 (73.7 bits), Expect = 9.1e-16, Sum P(2) = 9.1e-16
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 27 DNAGCPSTCGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
D GC C CN LG+ C D+ C CK+ V G CD+C P +WGLS D
Sbjct: 447 DPLGC-QPCTCNALGTVPGGSPCDTDSGNCYCKRLVTGRNCDQCLPQHWGLSN------D 499
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
+DGC C C G++ +C ++G+C C+ + G +C++
Sbjct: 500 MDGCRPCDCDHGGAINNNCSPVSGQCQCREHMFGRRCDQ 538
Score = 191 (72.3 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 39/110 (35%), Positives = 50/110 (45%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C PD +A G GC C C+ S +C E QC CK G GG C C +WG
Sbjct: 1065 CAPDTWNMASGK---GCED-CDCDPNHSFGSSCNEIMGQCSCKPGFGGRTCRECRELFWG 1120
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
P++ C C C G + C ++TG CVC GV G +C+ C
Sbjct: 1121 -------NPEVK-CHACDCDPRGIAEQQCNKVTGHCVCVEGVSGPRCDTC 1162
Score = 174 (66.3 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 44/117 (37%), Positives = 54/117 (46%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC C C+ GS C E T QC+C G G +CDRC PGYWG P+ C
Sbjct: 813 GC-RPCDCSPEGSVHSYCHEATGQCECIAGAYGRQCDRCLPGYWGF-------PN---CR 861
Query: 90 KCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNECL-----DPNKKLGPNGCMPGM 140
C C+ G E C+ TG+C+ C+ G C CL DP G + C P M
Sbjct: 862 PCTCN--GHA-EQCDPQTGQCLSCRDHTTGHNCERCLGGYYGDPVLGSGDH-CRPCM 914
Score = 165 (63.1 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 40/117 (34%), Positives = 58/117 (49%)
Query: 35 CGCNKLGSTEDA-CIEDTE--------QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
C C+ +GS C T+ QC+CK V G +CD+C+ G++GLS+ D
Sbjct: 395 CNCDPVGSLNGGVCDPMTDVSLGLISGQCRCKPNVEGERCDQCKQGHYGLSE------DP 448
Query: 86 DGCLKCGCSQFGSVR--EDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN--GCMP 138
GC C C+ G+V C+ +G C CK V G C++CL + L + GC P
Sbjct: 449 LGCQPCTCNALGTVPGGSPCDTDSGNCYCKRLVTGRNCDQCLPQHWGLSNDMDGCRP 505
Score = 142 (55.0 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 39/124 (31%), Positives = 53/124 (42%)
Query: 26 PDNAG--C-PSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSY 81
P G C P C N ++C T C KC G C+RC GY+G + S
Sbjct: 962 PHEVGGECRPCQCNSNIDMMDPESCDARTGACVKCLYHTEGESCNRCRLGYYGNALTQS- 1020
Query: 82 APDIDGCLKCGCSQFGSVRE--------DCEQMTGRCVCKPGVKGSKCNECL-DPNKKLG 132
C KC C+Q G+V E +C+ +G+C+C P V G C++C D
Sbjct: 1021 ------CRKCVCNQMGTVEEMCPSPGNCNCDLTSGQCLCLPNVVGQHCDQCAPDTWNMAS 1074
Query: 133 PNGC 136
GC
Sbjct: 1075 GKGC 1078
Score = 139 (54.0 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 53/182 (29%), Positives = 71/182 (39%)
Query: 26 PDNAGCPST--CGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYA 82
P G P+ C CN G E C T QC C+ G C+RC GY+G + S
Sbjct: 852 PGYWGFPNCRPCTCN--GHAEQ-CDPQTGQCLSCRDHTTGHNCERCLGGYYGDPVLGSG- 907
Query: 83 PDIDGCLKCGCS-------QF-GSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN 134
D C C C QF G+ + + CVC G KG++C EC P P+
Sbjct: 908 ---DHCRPCMCPDGPGSGRQFSGACYKSPDSSQVFCVCNQGYKGARCEECA-PGYYGNPH 963
Query: 135 GCMPGMEVKPC--NG-----EPPVINLQTGVELDCGSGANREDCPSDAYCHITQNFARCC 187
G E +PC N +P + +TG + C E C + + C
Sbjct: 964 EV--GGECRPCQCNSNIDMMDPESCDARTGACVKCLYHTEGESCNRCRLGYYGNALTQSC 1021
Query: 188 RK 189
RK
Sbjct: 1022 RK 1023
Score = 135 (52.6 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 39/132 (29%), Positives = 54/132 (40%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIE--DTEQ--CKC 56
+G + CL +YG + L G C G AC + D+ Q C C
Sbjct: 887 TGHNCERCLGGYYG----DPVLGSGDHCRPCMCPDGPGSGRQFSGACYKSPDSSQVFCVC 942
Query: 57 KQGVGGLKCDRCEPGYWGLSKISSYAPDIDG-CLKCGCSQFGSVR--EDCEQMTGRCV-C 112
QG G +C+ C PGY+G ++ G C C C+ + E C+ TG CV C
Sbjct: 943 NQGYKGARCEECAPGYYGNPH------EVGGECRPCQCNSNIDMMDPESCDARTGACVKC 996
Query: 113 KPGVKGSKCNEC 124
+G CN C
Sbjct: 997 LYHTEGESCNRC 1008
Score = 114 (45.2 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 25/85 (29%), Positives = 35/85 (41%)
Query: 87 GCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCN 146
G C C GS+ C+ G+C C+P V G C+ C P GC P + P
Sbjct: 765 GVKACQCDPQGSLSTVCDPSGGQCQCRPNVVGRNCDRCAPATFLFXPQGCRP-CDCSPEG 823
Query: 147 GEPPVINLQTGVELDCGSGANREDC 171
+ TG + +C +GA C
Sbjct: 824 SVHSYCHEATG-QCECIAGAYGRQC 847
Score = 113 (44.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 32/108 (29%), Positives = 46/108 (42%)
Query: 7 SCLDSWYG-CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKC 65
SC + G C + + L G C + C C+ G E C + T C C +GV G +C
Sbjct: 1101 SCKPGFGGRTCRECRELFWGNPEVKCHA-CDCDPRGIAEQQCNKVTGHCVCVEGVSGPRC 1159
Query: 66 DRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCK 113
D C GY G P + C +C +++ + D T R V K
Sbjct: 1160 DTCARGYTG------EFPQCERCHQC-FAEWDIIVGDLTNQTHRLVQK 1200
Score = 92 (37.4 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 18/59 (30%), Positives = 32/59 (54%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C P + L+ D GC C C+ G+ + C + QC+C++ + G +CD+ E G++
Sbjct: 489 CLPQHWGLSNDMD--GC-RPCDCDHGGAINNNCSPVSGQCQCREHMFGRRCDQVESGFY 544
Score = 47 (21.6 bits), Expect = 9.1e-16, Sum P(2) = 9.1e-16
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 147 GEPPVINLQTGVELDCGSGANREDCPSDAYC 177
G+ ++L E CGS A E+C +D+ C
Sbjct: 1380 GQLETLDLSELSEKTCGSPAGSENC-ADSRC 1409
>RGD|1308889 [details] [associations]
symbol:Lama2 "laminin, alpha 2" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005604 "basement
membrane" evidence=ISO] [GO:0005605 "basal lamina"
evidence=ISO;IDA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon
guidance" evidence=ISO] [GO:0022011 "myelination in peripheral
nervous system" evidence=IEP] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEP] [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=ISO] [GO:0042383
"sarcolemma" evidence=ISO] [GO:0043197 "dendritic spine"
evidence=IDA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 RGD:1308889 GO:GO:0007411 GO:GO:0030155 GO:GO:0043197
GO:GO:0030198 GO:GO:0007155 GO:GO:0042383 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0005605 GO:GO:0022011 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 IPI:IPI00361301
PRIDE:F1M614 Ensembl:ENSRNOT00000014917 ArrayExpress:F1M614
Uniprot:F1M614
Length = 3085
Score = 210 (79.0 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 58/163 (35%), Positives = 75/163 (46%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P+ L G GC C CN GS C E + QC C+ GV G KCDRC GY+
Sbjct: 914 CKPETFGLQLG---RGC-IPCNCNSFGSKSFDC-EASGQCWCQPGVAGKKCDRCAHGYFN 968
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN 134
+ GC C CS G+ +C TG+C+C P G KC+ECL PN G +
Sbjct: 969 FQE--------GGCTACDCSHLGN---NCNPKTGQCICPPNTIGEKCSECL-PNT-WG-H 1014
Query: 135 GCMPGMEVKPCN--GE-PPVINLQTGVELDCG---SGANREDC 171
+ G +V C+ G N+ TG + C SG +C
Sbjct: 1015 SIVTGCKVCNCSTVGSLSSQCNINTG-QCSCHPKFSGMKCSEC 1056
Score = 181 (68.8 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 44/123 (35%), Positives = 55/123 (44%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC + C C+ LG+ C T QC C G KC C P WG S ++ GC
Sbjct: 973 GC-TACDCSHLGNN---CNPKTGQCICPPNTIGEKCSECLPNTWGHSIVT-------GCK 1021
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDP--NKKL-GPNGC-MPGMEVKPC 145
C CS GS+ C TG+C C P G KC+EC N L C +PG + C
Sbjct: 1022 VCNCSTVGSLSSQCNINTGQCSCHPKFSGMKCSECNRGHWNYPLCSLCDCFLPGTDATTC 1081
Query: 146 NGE 148
+ E
Sbjct: 1082 DSE 1084
Score = 168 (64.2 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 44/148 (29%), Positives = 62/148 (41%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLG-STEDACIEDTEQCKCKQG 59
+G + + C +YG + L CP N S +ED C +G
Sbjct: 1407 AGDFCERCALGYYGIV---RGLPNDCQPCACPLISPSNNFSPSCVLEGLEDYRCTACPRG 1463
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGS 119
G C+RC PGY G S +P C +C C +GS+ C+ +TG C C+PG G
Sbjct: 1464 YEGQYCERCAPGYAG----SPSSPG-GSCQECECDPYGSLPVPCDPVTGLCTCRPGATGR 1518
Query: 120 KCNECLDPNKKLGPNGCMPGMEVKPCNG 147
KC+ C + + G G E C G
Sbjct: 1519 KCDGCEHGHAREGAECVFCGDE---CTG 1543
Score = 167 (63.8 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 43/133 (32%), Positives = 58/133 (43%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ------- 53
+GI ++C+D ++ + P C C+ GS + CI+D +
Sbjct: 349 AGINCETCIDGFF------RPKGVSPSYPRPCQPCHCDPAGSLSEVCIKDEKHTRRGLKP 402
Query: 54 --CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV 111
C CK G GG+ CDRC GY G Y PD C C CS GS +D G C
Sbjct: 403 GSCYCKPGFGGMNCDRCVRGYRG------Y-PD---CQPCNCSGLGSTNQD--PCIGPCS 450
Query: 112 CKPGVKGSKCNEC 124
CK V+G C+ C
Sbjct: 451 CKENVEGEDCSHC 463
Score = 167 (63.8 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 40/116 (34%), Positives = 54/116 (46%)
Query: 26 PDNAGCPSTCGCNKLGSTEDACIEDTEQCK-CKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
P + P C N S +C + C CK G G C+ C GY+G A D
Sbjct: 821 PGGSCQPCLCNDNLDFSIPGSCDSLSGSCLICKPGTTGRFCELCADGYFG------DAVD 874
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPN--KKLGPNGCMP 138
C C C+ GS E C + TG+C C+P V+G +C+EC +LG GC+P
Sbjct: 875 AKNCQPCRCNVNGSFSEICHRKTGQCECRPNVQGQRCDECKPETFGLQLG-RGCIP 929
Score = 157 (60.3 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 36/112 (32%), Positives = 46/112 (41%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC C C+ +GS C +T QC C G+KC C G+W S + G
Sbjct: 1019 GC-KVCNCSTVGSLSSQCNINTGQCSCHPKFSGMKCSECNRGHWNYPLCSLCDCFLPGTD 1077
Query: 90 KCGCSQFGSVRE-DCEQMTGRCVCKPGVKGSKCNECLDPNK----KLGPNGC 136
C R+ C TG+C CK V+G C+ C P K P GC
Sbjct: 1078 ATTCDS--ETRKCSCSDQTGQCTCKVNVEGVHCDRCR-PGKFGLEAKNPLGC 1126
Score = 140 (54.3 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 53/186 (28%), Positives = 74/186 (39%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ---C-KCK 57
G Y CL +YG P T ++ CP N T C D C +C
Sbjct: 745 GPYCNECLPGFYGD-PTRGT-SEDCQPCACPLNIPSNNFSPT---CHLDRSLGLICDECP 799
Query: 58 QGVGGLKCDRCEPGYWGLSKISSYAPDIDG--CLKCGCSQ---FGSVREDCEQMTGRC-V 111
G G +C+RC GY+G P I G C C C+ F S+ C+ ++G C +
Sbjct: 800 VGYTGPRCERCAEGYFG-------QPSIPGGSCQPCLCNDNLDF-SIPGSCDSLSGSCLI 851
Query: 112 CKPGVKGSKCNECLDPNKKLGPNG-CMPGMEVKPC----NGE-PPVINLQTGVELDCGSG 165
CKPG G C C D G G + +PC NG + + +TG + +C
Sbjct: 852 CKPGTTGRFCELCAD-----GYFGDAVDAKNCQPCRCNVNGSFSEICHRKTG-QCECRPN 905
Query: 166 ANREDC 171
+ C
Sbjct: 906 VQGQRC 911
Score = 124 (48.7 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 43/164 (26%), Positives = 67/164 (40%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
+G + + C D ++G D K C C CN GS + C T QC+C+ V
Sbjct: 857 TGRFCELCADGYFGDAVDAKN---------C-QPCRCNVNGSFSEICHRKTGQCECRPNV 906
Query: 61 GGLKCDRCEPGYWGL-----------SKISSYAPDIDGCLKCGCSQFGSVREDCEQMT-- 107
G +CD C+P +GL + S + D + +C C Q G + C++
Sbjct: 907 QGQRCDECKPETFGLQLGRGCIPCNCNSFGSKSFDCEASGQCWC-QPGVAGKKCDRCAHG 965
Query: 108 ------GRCV-CKPGVKGSKCN----ECLDPNKKLGP--NGCMP 138
G C C G+ CN +C+ P +G + C+P
Sbjct: 966 YFNFQEGGCTACDCSHLGNNCNPKTGQCICPPNTIGEKCSECLP 1009
Score = 121 (47.7 bits), Expect = 0.00023, P = 0.00023
Identities = 39/133 (29%), Positives = 52/133 (39%)
Query: 43 TEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG-CLKCGCSQFGSVRE 101
T+ + E C+C G G C+ C P + +++ G C C C FG E
Sbjct: 676 TDRSIASAVEVCQCPPGYSGSSCEACWPRH---RRVNGTI--FGGLCEPCQC--FGHA-E 727
Query: 102 DCEQMTGRCV-CKPGVKGSKCNECLDPNKKLGPN-GCMPGMEVKPCNGEPPVINLQTGVE 159
C +TG C+ CK G CNECL P P G + C P N
Sbjct: 728 ACNDVTGECLSCKDHTGGPYCNECL-PGFYGDPTRGTSEDCQPCACPLNIPSNNFSPTCH 786
Query: 160 LDCGSGANREDCP 172
LD G ++CP
Sbjct: 787 LDRSLGLICDECP 799
Score = 118 (46.6 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 38/111 (34%), Positives = 45/111 (40%)
Query: 1 SGIYLKSC-LDSW-YGCCPDNKTLAQGPDNAGCPS-TCGCNKLGSTEDACIEDTEQCKCK 57
SG+ C W Y C G D C S T C+ C + T QC CK
Sbjct: 1049 SGMKCSECNRGHWNYPLCSLCDCFLPGTDATTCDSETRKCS--------CSDQTGQCTCK 1100
Query: 58 QGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTG 108
V G+ CDRC PG +GL A + GC C C FG V C + G
Sbjct: 1101 VNVEGVHCDRCRPGKFGLE-----AKNPLGCSSCYC--FG-VTSQCSEAKG 1143
Score = 103 (41.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 35 CGCNKLGST-EDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C C+ LGST +D CI C CK+ V G C C+ G++ L + + GC +C C
Sbjct: 432 CNCSGLGSTNQDPCIGP---CSCKENVEGEDCSHCKFGFFNLQEENQ-----KGCEECFC 483
Query: 94 SQFGSVREDCE 104
S V + C+
Sbjct: 484 S---GVSDRCQ 491
Score = 79 (32.9 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 24/84 (28%), Positives = 34/84 (40%)
Query: 110 CVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCN--GEPPVINLQTGVELDCGS--- 164
C C PG GS C C ++++ NG + G +PC G N TG L C
Sbjct: 687 CQCPPGYSGSSCEACWPRHRRV--NGTIFGGLCEPCQCFGHAEACNDVTGECLSCKDHTG 744
Query: 165 GANREDCPSDAYCHITQNFARCCR 188
G +C Y T+ + C+
Sbjct: 745 GPYCNECLPGFYGDPTRGTSEDCQ 768
Score = 44 (20.5 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 135 GCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPS 173
GC+ +++ G+P +N +EL G CP+
Sbjct: 3049 GCIRSLKLTKGTGKPLEVNFAKALEL---RGVQPVSCPT 3084
>UNIPROTKB|A4D0S4 [details] [associations]
symbol:LAMB4 "Laminin subunit beta-4" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
EMBL:CH236947 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 CTD:22798 eggNOG:NOG303831 KO:K06245
EMBL:AF028816 EMBL:AC005048 EMBL:BC045172 EMBL:BC140804
EMBL:BC142619 EMBL:AK075165 IPI:IPI00295437 IPI:IPI00852842
IPI:IPI00927194 RefSeq:NP_031382.2 UniGene:Hs.62022
ProteinModelPortal:A4D0S4 SMR:A4D0S4 IntAct:A4D0S4 STRING:A4D0S4
PhosphoSite:A4D0S4 PaxDb:A4D0S4 PRIDE:A4D0S4
Ensembl:ENST00000205386 Ensembl:ENST00000388780
Ensembl:ENST00000388781 Ensembl:ENST00000422975 GeneID:22798
KEGG:hsa:22798 UCSC:uc003vey.2 GeneCards:GC07M107663 HGNC:HGNC:6491
HPA:HPA020242 HPA:HPA024247 neXtProt:NX_A4D0S4 PharmGKB:PA30279
OMA:CHPQGSK OrthoDB:EOG46DM1W ChiTaRS:LAMB4 GenomeRNAi:22798
NextBio:43142 ArrayExpress:A4D0S4 Bgee:A4D0S4 CleanEx:HS_LAMB4
Genevestigator:A4D0S4 Uniprot:A4D0S4
Length = 1761
Score = 211 (79.3 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 59/187 (31%), Positives = 79/187 (42%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIED--TEQCKCKQG 59
G + C YG N+T + +A S C G AC+ D T C C
Sbjct: 1000 GANCQLCKPGHYGSAL-NQTCRRCSCHASGVSPMECPPGGG---ACLCDPVTGACPCLPN 1055
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGS 119
V GL CDRC GYW L P GC C C S C+Q+TG+C CK G G
Sbjct: 1056 VTGLACDRCADGYWNL------VPG-RGCQSCDCDPRTSQSSHCDQLTGQCPCKLGYGGK 1108
Query: 120 KCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSDAYCHI 179
+C+EC + P C+P + + P+ + TG+ C G + + C A H
Sbjct: 1109 RCSECQENYYGDPPGRCIP-CDCNRAGTQKPICDPDTGM-CRCREGVSGQRCDRCARGH- 1165
Query: 180 TQNFARC 186
+Q F C
Sbjct: 1166 SQEFPTC 1172
Score = 188 (71.2 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 41/110 (37%), Positives = 50/110 (45%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTED-ACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C P++ L+ D GC C CN LGS C DT QC C V G C+ C GYW
Sbjct: 437 CKPNHYGLS-ATDPLGC-QPCDCNPLGSLPFLTCDVDTGQCLCLSYVTGAHCEECTVGYW 494
Query: 74 GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
GL + GC C C G+ C G+C C+P V G C+E
Sbjct: 495 GLGN------HLHGCSPCDCDIGGAYSNVCSPKNGQCECRPHVTGRSCSE 538
Score = 184 (69.8 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 50/145 (34%), Positives = 64/145 (44%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ GS +C QC+CK V G CDRC G + L GC C C
Sbjct: 769 CKCHPQGSVGSSCSRLGGQCQCKPLVVGRCCDRCSTGSYDLGH--------HGCHPCHCH 820
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINL 154
GS C+Q+TG+C C V G +C+ CL G G P PCN + +
Sbjct: 821 PQGSKDTVCDQVTGQCPCHGEVSGRRCDRCL-----AGYFG-FPSCHPCPCNRFAELCDP 874
Query: 155 QTGVELDCG---SGANREDCPSDAY 176
+TG +CG +G N E C D Y
Sbjct: 875 ETGSCFNCGGFTTGRNCERC-IDGY 898
Score = 170 (64.9 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 37/89 (41%), Positives = 49/89 (55%)
Query: 53 QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRE-DCEQMTGRCV 111
QC CK+ V G KCD+C+P ++GLS A D GC C C+ GS+ C+ TG+C+
Sbjct: 422 QCLCKENVEGAKCDQCKPNHYGLS-----ATDPLGCQPCDCNPLGSLPFLTCDVDTGQCL 476
Query: 112 CKPGVKGSKCNECLDPNKKLGPN--GCMP 138
C V G+ C EC LG + GC P
Sbjct: 477 CLSYVTGAHCEECTVGYWGLGNHLHGCSP 505
Score = 157 (60.3 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 54/189 (28%), Positives = 79/189 (41%)
Query: 7 SCLDSWYGC-CPDNKTLAQG-PDNAGCP-STCGCNK-LGSTE-DACIEDTEQC-KCKQGV 60
+CL + G C + T G P +G P C CN + T+ ++C T +C +C
Sbjct: 939 NCLQGYTGTQCGECSTGFYGNPRISGAPCQPCACNNNIDVTDPESCSRVTGECLRCLHNT 998
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFG-SVRED--------CEQMTGRCV 111
G C C+PG++G S ++ C +C C G S E C+ +TG C
Sbjct: 999 QGANCQLCKPGHYG-SALNQT------CRRCSCHASGVSPMECPPGGGACLCDPVTGACP 1051
Query: 112 CKPGVKGSKCNECLDPNKKLGPN-GCMPGMEVKPCNGEPPVINLQTGVELDC--GSGANR 168
C P V G C+ C D L P GC + P + + TG + C G G R
Sbjct: 1052 CLPNVTGLACDRCADGYWNLVPGRGCQ-SCDCDPRTSQSSHCDQLTG-QCPCKLGYGGKR 1109
Query: 169 -EDCPSDAY 176
+C + Y
Sbjct: 1110 CSECQENYY 1118
Score = 154 (59.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 37/113 (32%), Positives = 49/113 (43%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
CC T + + GC C C+ GS + C + T QC C V G +CDRC GY+G
Sbjct: 798 CCDRCSTGSYDLGHHGC-HPCHCHPQGSKDTVCDQVTGQCPCHGEVSGRRCDRCLAGYFG 856
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNECLD 126
P C C C++F + C+ TG C C G C C+D
Sbjct: 857 F-------PS---CHPCPCNRFAEL---CDPETGSCFNCGGFTTGRNCERCID 896
Score = 132 (51.5 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 37/131 (28%), Positives = 57/131 (43%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ----CKC 56
+G + C+D +YG N + Q CP N+ + +C ++ C C
Sbjct: 887 TGRNCERCIDGYYG----NPSSGQPCRPCLCPDDPSSNQYFA--HSCYQNLWSSDVICNC 940
Query: 57 KQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVR--EDCEQMTGRCV-CK 113
QG G +C C G++G +IS AP C C C+ V E C ++TG C+ C
Sbjct: 941 LQGYTGTQCGECSTGFYGNPRISG-AP----CQPCACNNNIDVTDPESCSRVTGECLRCL 995
Query: 114 PGVKGSKCNEC 124
+G+ C C
Sbjct: 996 HNTQGANCQLC 1006
Score = 128 (50.1 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 39/119 (32%), Positives = 52/119 (43%)
Query: 78 ISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCM 137
IS A DG + C C GSV C ++ G+C CKP V G C+ C + LG +GC
Sbjct: 756 ISMSAKLHDGAVACKCHPQGSVGSSCSRLGGQCQCKPLVVGRCCDRCSTGSYDLGHHGCH 815
Query: 138 PGMEVKPCNGEPPVINLQTGVELDC-G--SGANREDCPSDAY----CHIT--QNFARCC 187
P P + V + TG + C G SG + C + + CH FA C
Sbjct: 816 P-CHCHPQGSKDTVCDQVTG-QCPCHGEVSGRRCDRCLAGYFGFPSCHPCPCNRFAELC 872
Score = 126 (49.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 42/138 (30%), Positives = 64/138 (46%)
Query: 54 CK-CKQGVGGLKCDRCEPGYWG--LSKISS-YAPDIDGCLKCGCSQFGSVRED-CEQ--- 105
C+ C+ G CDRC P ++ L IS YA C+ C C G++ C
Sbjct: 359 CEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYA-----CIPCECDPDGTISGGICVSHSD 413
Query: 106 -----MTGRCVCKPGVKGSKCNECLDPN----KKLGPNGCMPGMEVKPCNGEPPVI-NLQ 155
+ G+C+CK V+G+KC++C PN P GC P + P P + ++
Sbjct: 414 PALGSVAGQCLCKENVEGAKCDQC-KPNHYGLSATDPLGCQP-CDCNPLGSLPFLTCDVD 471
Query: 156 TG--VELDCGSGANREDC 171
TG + L +GA+ E+C
Sbjct: 472 TGQCLCLSYVTGAHCEEC 489
Score = 35 (17.4 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 58 QGVGGLKCD 66
QGVG + CD
Sbjct: 176 QGVGDIVCD 184
>MGI|MGI:99916 [details] [associations]
symbol:Lamb2 "laminin, beta 2" species:10090 "Mus musculus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=IGI] [GO:0005178 "integrin binding" evidence=IPI]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISO;IDA] [GO:0005605 "basal lamina"
evidence=IDA] [GO:0005608 "laminin-3 complex" evidence=ISO;IDA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IGI] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0007601 "visual perception"
evidence=IGI] [GO:0014002 "astrocyte development" evidence=IGI]
[GO:0014044 "Schwann cell development" evidence=IDA] [GO:0031175
"neuron projection development" evidence=IDA] [GO:0043256 "laminin
complex" evidence=IDA] [GO:0045202 "synapse" evidence=IDA]
[GO:0048677 "axon extension involved in regeneration" evidence=IMP]
[GO:0050808 "synapse organization" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IGI] [GO:0072249
"metanephric glomerular visceral epithelial cell development"
evidence=IMP] [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IMP] MGI:MGI:99916 GO:GO:0007411
GO:GO:0007528 GO:GO:0007601 GO:GO:0007155 GO:GO:0045202
PROSITE:PS00022 GO:GO:0060041 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
EMBL:CH466560 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
eggNOG:NOG241384 HOGENOM:HOG000007552 GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 HOVERGEN:HBG052301 CTD:3913
KO:K06243 OMA:QPYCIVS OrthoDB:EOG4KSPHW ChiTaRS:LAMB2 GO:GO:0048677
GO:GO:0072274 GO:GO:0072249 EMBL:U43541 EMBL:U42624 EMBL:BC026051
EMBL:X75928 IPI:IPI00119065 PIR:I48749 RefSeq:NP_032509.2
UniGene:Mm.425599 ProteinModelPortal:Q61292 SMR:Q61292
STRING:Q61292 PhosphoSite:Q61292 PaxDb:Q61292 PRIDE:Q61292
Ensembl:ENSMUST00000065014 GeneID:16779 KEGG:mmu:16779
InParanoid:Q8R0Y0 NextBio:290628 Bgee:Q61292 CleanEx:MM_LAMB2
Genevestigator:Q61292 GermOnline:ENSMUSG00000052911 Uniprot:Q61292
Length = 1799
Score = 211 (79.3 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 51/145 (35%), Positives = 66/145 (45%)
Query: 28 NAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
N P C C+ GS C QC+CK GV G +CD C GY+G + P G
Sbjct: 779 NGALP--CQCDPQGSLSSECSPHGGQCRCKPGVVGRRCDVCATGYYG------FGPA--G 828
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLG-PNGCMPGMEVKPCN 146
C C CS G++ CE +G+C C+PG G +C+ C + G PN C P + CN
Sbjct: 829 CQACQCSPDGALSALCEGTSGQCPCRPGAFGLRCDHC--QRGQWGFPN-CRPCV----CN 881
Query: 147 GEPPVINLQTGVELDCGSGANREDC 171
G + TG L C E C
Sbjct: 882 GRADECDTHTGACLGCRDYTGGEHC 906
Score = 182 (69.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 38/110 (34%), Positives = 53/110 (48%)
Query: 16 CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C D D GC C CN G+ + C + C CK+ V G CDRC PG+W
Sbjct: 455 CRDGFFGLSASDPRGC-QRCQCNSRGTVPGSSPCDSSSGTCFCKRLVTGHGCDRCLPGHW 513
Query: 74 GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
GLS D+ GC C C G++ C++ TG+C C+ + G +C +
Sbjct: 514 GLSH------DLLGCRPCDCDVGGALDPQCDEATGQCRCRQHMIGRRCEQ 557
Score = 182 (69.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 37/110 (33%), Positives = 48/110 (43%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P+ G GC C C+ + C E T QC C G GG C C+ YWG
Sbjct: 1080 CAPNFWNFTSG---RGC-QPCACHPSRARGPTCNEFTGQCHCHAGFGGRTCSECQELYWG 1135
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
P + C C C G + C + TG C C+PGV G +C++C
Sbjct: 1136 -------DPGLQ-CRACDCDPRGIDKPQCHRSTGHCSCRPGVSGVRCDQC 1177
Score = 167 (63.8 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 42/125 (33%), Positives = 60/125 (48%)
Query: 27 DNAGCPSTCGCNKLGSTEDA-CIEDTE--------QCKCKQGVGGLKCDRCEPGYWGLSK 77
D A C C C+ +GS + C + QC+CK+ V G +C +C G++GLS
Sbjct: 406 DPAVC-RPCDCDPMGSQDGGRCDSHDDPVLGLVSGQCRCKEHVVGTRCQQCRDGFFGLS- 463
Query: 78 ISSYAPDIDGCLKCGCSQFGSV--REDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN- 134
A D GC +C C+ G+V C+ +G C CK V G C+ CL + L +
Sbjct: 464 ----ASDPRGCQRCQCNSRGTVPGSSPCDSSSGTCFCKRLVTGHGCDRCLPGHWGLSHDL 519
Query: 135 -GCMP 138
GC P
Sbjct: 520 LGCRP 524
Score = 161 (61.7 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 45/152 (29%), Positives = 60/152 (39%)
Query: 25 GPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
G D CPST C+ C T QC C V GL CD C P +W +
Sbjct: 1045 GTDPRRCPSTDLCH--------CDPSTGQCPCLPHVQGLNCDHCAPNFWNFTSGR----- 1091
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKP 144
GC C C + C + TG+C C G G C+EC + G PG++ +
Sbjct: 1092 --GCQPCACHPSRARGPTCNEFTGQCHCHAGFGGRTCSECQE--LYWGD----PGLQCRA 1143
Query: 145 CNGEP-----PVINLQTGVELDCGSGANREDC 171
C+ +P P + TG C G + C
Sbjct: 1144 CDCDPRGIDKPQCHRSTG-HCSCRPGVSGVRC 1174
Score = 142 (55.0 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 51/169 (30%), Positives = 67/169 (39%)
Query: 23 AQGPDNAGCPSTCG-----CNKLGSTE----DACIEDTEQC-KCKQGVGGLKCDRCEPGY 72
A P + G PS G C G+ + DAC T QC +C G C C+PG+
Sbjct: 968 ACAPGHFGDPSKPGGRCQLCECSGNIDPMDPDACDPHTGQCLRCLHNTEGPHCGYCKPGF 1027
Query: 73 WGLSKISSYAPDIDGCLKCGCSQFGS-VRE----D---CEQMTGRCVCKPGVKGSKCNEC 124
G + S C +C C+ G+ R D C+ TG+C C P V+G C+ C
Sbjct: 1028 HGQAARQS-------CHRCTCNLLGTDPRRCPSTDLCHCDPSTGQCPCLPHVQGLNCDHC 1080
Query: 125 LDPN--KKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
PN GC P P P N TG + C +G C
Sbjct: 1081 A-PNFWNFTSGRGCQP-CACHPSRARGPTCNEFTG-QCHCHAGFGGRTC 1126
Score = 125 (49.1 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 35/110 (31%), Positives = 46/110 (41%)
Query: 78 ISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCM 137
IS A +G L C C GS+ +C G+C CKPGV G +C+ C GP GC
Sbjct: 771 ISVSALIYNGALPCQCDPQGSLSSECSPHGGQCRCKPGVVGRRCDVCATGYYGFGPAGCQ 830
Query: 138 PGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSDAYCHITQ-NFARC 186
+ P +G + T + C GA C +C Q F C
Sbjct: 831 -ACQCSP-DGALSALCEGTSGQCPCRPGAFGLRCD---HCQRGQWGFPNC 875
Score = 118 (46.6 bits), Expect = 0.00033, P = 0.00033
Identities = 36/132 (27%), Positives = 57/132 (43%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIED--TEQ--CKCK 57
G + + C+ ++G + L G CP G +C D ++Q C+C+
Sbjct: 903 GEHCERCIAGFHG----DPRLPYGGQCRPCPCPEGPGSQRHFATSCHRDGYSQQIVCQCR 958
Query: 58 QGVGGLKCDRCEPGYWGLSKISSYAPDIDG--CLKCGCS-QFGSVRED-CEQMTGRCV-C 112
+G GL+C+ C PG++G P G C C CS + D C+ TG+C+ C
Sbjct: 959 EGYTGLRCEACAPGHFG-------DPSKPGGRCQLCECSGNIDPMDPDACDPHTGQCLRC 1011
Query: 113 KPGVKGSKCNEC 124
+G C C
Sbjct: 1012 LHNTEGPHCGYC 1023
Score = 107 (42.7 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C P + L+ D GC C C+ G+ + C E T QC+C+Q + G +C++ +PGY+
Sbjct: 508 CLPGHWGLSH--DLLGC-RPCDCDVGGALDPQCDEATGQCRCRQHMIGRRCEQVQPGYF 563
Score = 54 (24.1 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 35/131 (26%), Positives = 50/131 (38%)
Query: 67 RCEPGYWGLSKISSYAPDIDG--------CLKCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
+C GY GL + + AP G C C CS G++ + M C P
Sbjct: 956 QCREGYTGL-RCEACAPGHFGDPSKPGGRCQLCECS--GNI----DPMDPDA-CDPHT-- 1005
Query: 119 SKCNECLDPNKKLGPN-G-CMPGMEVKPCNGEPPVINLQTGVELDCGS-GANREDCPSDA 175
+C CL + GP+ G C PG +G+ Q+ C G + CPS
Sbjct: 1006 GQCLRCLHNTE--GPHCGYCKPGF-----HGQAA---RQSCHRCTCNLLGTDPRRCPSTD 1055
Query: 176 YCHITQNFARC 186
CH + +C
Sbjct: 1056 LCHCDPSTGQC 1066
>UNIPROTKB|F1NZZ2 [details] [associations]
symbol:LAMA5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001738
"morphogenesis of a polarized epithelium" evidence=IEA] [GO:0001755
"neural crest cell migration" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0007229 "integrin-mediated signaling pathway" evidence=IEA]
[GO:0007517 "muscle organ development" evidence=IEA] [GO:0016331
"morphogenesis of embryonic epithelium" evidence=IEA] [GO:0030324
"lung development" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0042384
"cilium assembly" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0060445 "branching involved in salivary
gland morphogenesis" evidence=IEA] [GO:0090002 "establishment of
protein localization to plasma membrane" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0005615 GO:GO:0016477 GO:GO:0030155 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007229 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0090002 InterPro:IPR009030 SUPFAM:SSF57184 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:LRHTTGP GO:GO:0043259 EMBL:AADN02019242
EMBL:AADN02019240 EMBL:AADN02019241 IPI:IPI00578246
Ensembl:ENSGALT00000008535 Uniprot:F1NZZ2
Length = 3668
Score = 213 (80.0 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 48/131 (36%), Positives = 59/131 (45%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ G+ D+C T QC CK GV G CD CE GY+G S GC +C C
Sbjct: 2001 CNCSPCGT--DSCHPQTGQCFCKAGVTGQHCDHCEEGYYGFEGCS-------GCRRCDCD 2051
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP----GMEVKPCNGEPP 150
G++ C TG+C C PGV GS+C +C GC G P GE
Sbjct: 2052 -VGAMGSSCHAQTGQCHCLPGVSGSRCQQCAPGYWGFSERGCRKCECRGGSCDPRTGECT 2110
Query: 151 VINLQTGVELD 161
N TG + D
Sbjct: 2111 CSNGLTGKQCD 2121
Score = 184 (69.8 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 37/97 (38%), Positives = 51/97 (52%)
Query: 29 AGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
+GC C C+ +G+ +C T QC C GV G +C +C PGYWG S+ GC
Sbjct: 2043 SGC-RRCDCD-VGAMGSSCHAQTGQCHCLPGVSGSRCQQCAPGYWGFSE--------RGC 2092
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECL 125
KC C + GS C+ TG C C G+ G +C+ C+
Sbjct: 2093 RKCEC-RGGS----CDPRTGECTCSNGLTGKQCDVCM 2124
Score = 179 (68.1 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 41/113 (36%), Positives = 56/113 (49%)
Query: 30 GCPSTCGCNKLGS---TEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
GC C C++ G TE C D+ QCKCK V G +CD C PGY+ + P
Sbjct: 1505 GCED-CNCSQPGVQELTELGCDVDSGQCKCKPNVIGRRCDLCAPGYY-------HYPS-- 1554
Query: 87 GCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKL---GPNGC 136
C +C C G+ C+ +TG+C CK V+G +C++C L P GC
Sbjct: 1555 -CRRCDCHPDGTEVSVCDPVTGQCHCKENVEGPRCDQCRLGTFSLDASNPKGC 1606
Score = 168 (64.2 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 39/112 (34%), Positives = 55/112 (49%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ G+ ++ C QC+C G C++C G++G Y P C C CS
Sbjct: 615 CSCDSRGAVDNNC-SPAGQCRCHVNFTGHTCNQCALGFYG------Y-PS---CTPCQCS 663
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCN 146
+ GS+ C Q TG+C C+P V G +C+ C+ P G G P EV CN
Sbjct: 664 REGSLHSTCNQETGQCSCRPKVTGLRCDSCV-P----GAYG-FPHCEVGSCN 709
Score = 166 (63.5 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 33/90 (36%), Positives = 45/90 (50%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ G + C +T QC C+ G G CDRC PGY+ +Y C CGCS
Sbjct: 524 CQCSGPGQYDGTCDSETGQCLCRTGFEGQLCDRCAPGYF------NYPL----CQLCGCS 573
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
G++ C+ +GRC CK G +C +C
Sbjct: 574 AVGTLPGGCDS-SGRCFCKAEFAGPRCEQC 602
Score = 162 (62.1 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 34/93 (36%), Positives = 45/93 (48%)
Query: 37 CNKLGS-TEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQ 95
CN G T D + C C+ V G CDRC+P YW L+ + Y GC C C
Sbjct: 708 CNPAGLVTADPSLAPGS-CACRAYVEGPACDRCKPLYWNLTPDNPY-----GCTSCKCET 761
Query: 96 FGSVR--EDCEQMTGRCVCKPGVKGSKCNECLD 126
G++ +C+Q G+C CKP G C+ C D
Sbjct: 762 KGTISGIAECQQGNGQCFCKPNTCGQFCSACKD 794
Score = 153 (58.9 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 38/115 (33%), Positives = 50/115 (43%)
Query: 30 GCPST--CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
G PS C C++ GS C ++T QC C+ V GL+CD C PG +G P
Sbjct: 653 GYPSCTPCQCSREGSLHSTCNQETGQCSCRPKVTGLRCDSCVPGAYGF-------PH--- 702
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC------LDPNKKLGPNGC 136
C C+ G V D G C C+ V+G C+ C L P+ G C
Sbjct: 703 CEVGSCNPAGLVTADPSLAPGSCACRAYVEGPACDRCKPLYWNLTPDNPYGCTSC 757
Score = 152 (58.6 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 32/101 (31%), Positives = 45/101 (44%)
Query: 26 PDNA-GCPSTCGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYA 82
PDN GC S C C G+ C + QC CK G C C+ GY+ + + +
Sbjct: 748 PDNPYGCTS-CKCETKGTISGIAECQQGNGQCFCKPNTCGQFCSACKDGYFSMENTNYF- 805
Query: 83 PDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
GC C C GS+ CE+ +G C C+ +G C +
Sbjct: 806 ----GCQGCRCDVGGSLGPSCEERSGACRCRQNTRGPTCTQ 842
Score = 147 (56.8 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 33/98 (33%), Positives = 45/98 (45%)
Query: 29 AGCPSTCGCNKLGSTEDACIEDTE--QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
AG C C G+ +AC +D C CK G CD+C PG++G P
Sbjct: 471 AGQIINCDCYAGGTEGNACRKDPRVGMCVCKPNFQGTHCDQCTPGHYG--------PL-- 520
Query: 87 GCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C C CS G C+ TG+C+C+ G +G C+ C
Sbjct: 521 -CQPCQCSGPGQYDGTCDSETGQCLCRTGFEGQLCDRC 557
Score = 142 (55.0 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 33/87 (37%), Positives = 41/87 (47%)
Query: 42 STEDACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC-SQFGSV 99
S ED E C C+ G+ C+RC PGY+ +P I C +C C S F
Sbjct: 364 SREDK-FEGGGVCIDCQHHTTGVNCERCIPGYYRSPDHPIDSPYI--CYRCNCKSDFTD- 419
Query: 100 REDCEQMTGRCVCKPGVKGSKCNECLD 126
CE +TGRC CKP G CN C +
Sbjct: 420 -GTCEDLTGRCYCKPNYTGEHCNACAE 445
Score = 139 (54.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 35/110 (31%), Positives = 51/110 (46%)
Query: 16 CPDNK-TLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C D+ +L+ +N P C C++ G+ C QC CK V G +C RC GYWG
Sbjct: 1401 CRDSAISLSLFYNNGAQP--CQCHEAGARGSQCEPFGGQCPCKSNVIGRECSRCATGYWG 1458
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
P+ C C C G+ C+++TG+C+C P +C C
Sbjct: 1459 F-------PN---CRPCDC---GT--RLCDEVTGQCICPPHTLKPECVVC 1493
Score = 136 (52.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 51/189 (26%), Positives = 74/189 (39%)
Query: 1 SGIYLKSCLDSWYG--C--CPDNKTLAQGPDNA----GCPSTCGCNKLGSTEDA--CIE- 49
SGI L +C + G C C D ++ D + GCP C + + S A C+
Sbjct: 1854 SGICL-NCQHNTEGDHCEQCKDGYVGSRNADGSLQCVGCP--CPLS-VASNNFAIGCVHK 1909
Query: 50 -DTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS---QFGSVREDCEQ 105
+ QC CK G G C+RC PGY+G + C C CS + C+
Sbjct: 1910 GSSTQCLCKPGYAGPNCERCAPGYYGNPLVIG-----SSCQPCDCSGNTDPNMLFSSCDS 1964
Query: 106 MTGRCV-CKPGVKGSKCNECLDP--NKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDC 162
+TG C+ C G +C C + C PC + + QTG + C
Sbjct: 1965 LTGTCMGCMHHTAGVRCEVCAPGFYGDAVAAKNCTQ-CNCSPCGTDS--CHPQTG-QCFC 2020
Query: 163 GSGANREDC 171
+G + C
Sbjct: 2021 KAGVTGQHC 2029
Score = 133 (51.9 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 28/90 (31%), Positives = 42/90 (46%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
CGC+ +G+ C + + +C CK G +C++C G+ SY P C C C
Sbjct: 570 CGCSAVGTLPGGC-DSSGRCFCKAEFAGPRCEQCSSGH------HSY-PH---CYACSCD 618
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
G+V +C G+C C G CN+C
Sbjct: 619 SRGAVDNNCSP-AGQCRCHVNFTGHTCNQC 647
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 46/177 (25%), Positives = 70/177 (39%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
+G+ + C+ +Y PD+ D+ C C K T+ C + T +C CK
Sbjct: 383 TGVNCERCIPGYYRS-PDHPI-----DSPYICYRCNC-KSDFTDGTCEDLTGRCYCKPNY 435
Query: 61 GGLKCDRCEPGYWGLSK---ISSYAPDIDG--------CLKCGCSQFGSVREDCEQ--MT 107
G C+ C GY + ++A + G + C C G+ C +
Sbjct: 436 TGEHCNACAEGYLDFPHCYPVPAFAYNDTGEQVLPAGQIINCDCYAGGTEGNACRKDPRV 495
Query: 108 GRCVCKPGVKGSKCNECLDPNKKLGP--NGCM---PGMEVKPCNGEPPVINLQTGVE 159
G CVCKP +G+ C++C P GP C PG C+ E +TG E
Sbjct: 496 GMCVCKPNFQGTHCDQCT-PGH-YGPLCQPCQCSGPGQYDGTCDSETGQCLCRTGFE 550
Score = 120 (47.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 40/109 (36%), Positives = 50/109 (45%)
Query: 47 CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRE----D 102
C E T QC C +C CEP +G P I GC C CSQ G V+E
Sbjct: 1472 CDEVTGQCICPPHTLKPECVVCEPQTFGCH------PLI-GCEDCNCSQPG-VQELTELG 1523
Query: 103 CEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN----GCMP-GMEVKPCN 146
C+ +G+C CKP V G +C+ C P P+ C P G EV C+
Sbjct: 1524 CDVDSGQCKCKPNVIGRRCDLCA-PGYYHYPSCRRCDCHPDGTEVSVCD 1571
Score = 108 (43.1 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ G+ C T QC CK+ V G +CD+C G + L A + GC KC C
Sbjct: 1558 CDCHPDGTEVSVCDPVTGQCHCKENVEGPRCDQCRLGTFSLD-----ASNPKGCTKCFC- 1611
Query: 95 QFGS 98
FG+
Sbjct: 1612 -FGA 1614
Score = 58 (25.5 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 18/70 (25%), Positives = 23/70 (32%)
Query: 110 CVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVK-PCNGEPPVINLQTGVELDCGSGANR 168
C C G C EC P G G + CNG +G+ L+C
Sbjct: 1808 CFCPANYLGDSCQECA-PGYYRDTKGLFLGKCIPCHCNGHSDQCLPGSGICLNCQHNTEG 1866
Query: 169 EDCPS--DAY 176
+ C D Y
Sbjct: 1867 DHCEQCKDGY 1876
Score = 48 (22.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 12/28 (42%), Positives = 13/28 (46%)
Query: 24 QGPDNAG-CPSTCGCNKLGSTEDACIED 50
QG NA CP GC L ED + D
Sbjct: 1307 QGQTNATFCPHGYGCRSLVVAEDQIVLD 1334
>ZFIN|ZDB-GENE-081030-4 [details] [associations]
symbol:lamb2 "laminin, beta 2 (laminin S)"
species:7955 "Danio rerio" [GO:0016203 "muscle attachment"
evidence=IMP] [GO:0070831 "basement membrane assembly"
evidence=IMP] [GO:0061053 "somite development" evidence=IMP]
ZFIN:ZDB-GENE-081030-4 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 eggNOG:NOG241384 HOGENOM:HOG000007552
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 CTD:3913 KO:K06243 OrthoDB:EOG4KSPHW
EMBL:AL953864 IPI:IPI00499348 RefSeq:NP_001229974.1
UniGene:Dr.158661 UniGene:Dr.78258 Ensembl:ENSDART00000012166
Ensembl:ENSDART00000147326 GeneID:337767 KEGG:dre:337767
NextBio:20812405 Uniprot:B7ZDA6
Length = 1782
Score = 208 (78.3 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 45/132 (34%), Positives = 63/132 (47%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P++ LA G GC C C+ + AC E T QC+C+ G GG C C+ +WG
Sbjct: 1063 CAPNSWNLASGQ---GC-EPCACDPNNAYTSACNEFTGQCQCRVGFGGKTCTDCQENHWG 1118
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN 134
++ C C C G C +MTG CVC+ GV G +C++C G +
Sbjct: 1119 DPRVL--------CRACDCDPRGIESSQCNRMTGHCVCQQGVSGVRCDQCAR-----GFS 1165
Query: 135 GCMPGMEVKPCN 146
G P + KPC+
Sbjct: 1166 GTFP--DCKPCH 1175
Score = 203 (76.5 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 49/157 (31%), Positives = 70/157 (44%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ GS C QC+C+ + G +C++C PG +G + P GC C CS
Sbjct: 767 CECDPQGSLSSECDVRGGQCRCRPNISGRRCEKCAPGAYG------FGPS--GCKLCECS 818
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINL 154
GS C+ +G+C C+PG G +C+ C + PN C P CNG +
Sbjct: 819 LEGSQSRFCDLYSGQCPCRPGAYGQRCDGCQAGHWGF-PN-CRPCQ----CNGHADECHQ 872
Query: 155 QTGVELDCGS---GANREDCPSDAYCHITQNFARCCR 188
+TG L+C S G E C + Y + CR
Sbjct: 873 RTGACLNCRSNTAGDKCERCANGYYGNPVLGLGSQCR 909
Score = 182 (69.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 42/123 (34%), Positives = 60/123 (48%)
Query: 53 QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVR--EDCEQMTGRC 110
QC+CK V G +CD+C+PG++GLS A D GC C C G+V C+ ++G C
Sbjct: 421 QCRCKDNVEGSRCDKCKPGFFGLS-----ASDPRGCQPCKCDPRGTVSGSSQCDPVSGDC 475
Query: 111 VCKPGVKGSKCNECLDPNKKLG--PNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANR 168
CK V G CN+CL + L +GC G + +++TG + C S
Sbjct: 476 FCKRLVTGHSCNQCLPEHWALSHDTSGCR-GCDCDVGGATENQCSMETG-QCQCRSHMIG 533
Query: 169 EDC 171
C
Sbjct: 534 RQC 536
Score = 164 (62.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 50/162 (30%), Positives = 63/162 (38%)
Query: 35 CGCNKLGSTEDACI--ED------TEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
C CN LG+ C+ +D T QC+C V G CD C P W L+ S
Sbjct: 1022 CTCNFLGTERSQCLSRDDCVCQRATGQCQCLPNVIGQTCDHCAPNSWNLA--SG-----Q 1074
Query: 87 GCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECL-----DPNKKLGPNGCMP-GM 140
GC C C + C + TG+C C+ G G C +C DP C P G+
Sbjct: 1075 GCEPCACDPNNAYTSACNEFTGQCQCRVGFGGKTCTDCQENHWGDPRVLCRACDCDPRGI 1134
Query: 141 EVKPCN---GEPPVINLQTGVELD-CGSGANREDCPSDAYCH 178
E CN G +GV D C G + P CH
Sbjct: 1135 ESSQCNRMTGHCVCQQGVSGVRCDQCARGFSGT-FPDCKPCH 1175
Score = 154 (59.3 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 32/99 (32%), Positives = 46/99 (46%)
Query: 27 DNAGCPSTCGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
D GC C C+ G+ + C + C CK+ V G C++C P +W LS D
Sbjct: 447 DPRGC-QPCKCDPRGTVSGSSQCDPVSGDCFCKRLVTGHSCNQCLPEHWALSH------D 499
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
GC C C G+ C TG+C C+ + G +CN+
Sbjct: 500 TSGCRGCDCDVGGATENQCSMETGQCQCRSHMIGRQCNQ 538
Score = 146 (56.5 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 48/159 (30%), Positives = 64/159 (40%)
Query: 26 PDNAG--C-PSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSY 81
P G C P C N S ++C + T QC KC G C C GY+G + +
Sbjct: 960 PSKPGGQCQPCRCSNNIDLSDPESCDKRTGQCLKCLYNTEGPDCSVCRSGYYGDASRRN- 1018
Query: 82 APDIDGCLKCGCSQFGSVR------EDC--EQMTGRCVCKPGVKGSKCNECLDPNKKLGP 133
C KC C+ G+ R +DC ++ TG+C C P V G C+ C + L
Sbjct: 1019 ------CRKCTCNFLGTERSQCLSRDDCVCQRATGQCQCLPNVIGQTCDHCAPNSWNLAS 1072
Query: 134 N-GCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
GC P P N N TG + C G + C
Sbjct: 1073 GQGCEP-CACDPNNAYTSACNEFTG-QCQCRVGFGGKTC 1109
Score = 145 (56.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 41/133 (30%), Positives = 58/133 (43%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIED--TEQ--CKC 56
+G + C + +YG N L G CP G N +C +D ++Q C C
Sbjct: 885 AGDKCERCANGYYG----NPVLGLGSQCRPCPCPEGPNSGRHFAASCYQDNRSQQVVCNC 940
Query: 57 KQGVGGLKCDRCEPGYWGLSKISSYAPDIDG--CLKCGCSQFGSVR--EDCEQMTGRCV- 111
QG G +CD C PGY+G P G C C CS + E C++ TG+C+
Sbjct: 941 NQGYTGPRCDECAPGYFG-------DPSKPGGQCQPCRCSNNIDLSDPESCDKRTGQCLK 993
Query: 112 CKPGVKGSKCNEC 124
C +G C+ C
Sbjct: 994 CLYNTEGPDCSVC 1006
Score = 127 (49.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 26/86 (30%), Positives = 40/86 (46%)
Query: 86 DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPC 145
DG L C C GS+ +C+ G+C C+P + G +C +C GP+GC E
Sbjct: 762 DGALACECDPQGSLSSECDVRGGQCRCRPNISGRRCEKCAPGAYGFGPSGCKL-CECSLE 820
Query: 146 NGEPPVINLQTGVELDCGSGANREDC 171
+ +L +G + C GA + C
Sbjct: 821 GSQSRFCDLYSG-QCPCRPGAYGQRC 845
Score = 126 (49.4 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 34/109 (31%), Positives = 58/109 (53%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P++ L+ D +GC C C+ G+TE+ C +T QC+C+ + G +C++ E GY+
Sbjct: 489 CLPEHWALSH--DTSGCRG-CDCDVGGATENQCSMETGQCQCRSHMIGRQCNQVESGYFF 545
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
++ + Y + + K G Q GSV E+ E GR + G ++ E
Sbjct: 546 MA-LDHYIYEAETA-KLG--Q-GSVFEEREYQPGRPISWTGTGFARAPE 589
Score = 126 (49.4 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 47/171 (27%), Positives = 64/171 (37%)
Query: 35 CGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C CN G D C + T C C+ G KC+RC GY+G + + C C C
Sbjct: 861 CQCN--GHA-DECHQRTGACLNCRSNTAGDKCERCANGYYG-NPVLGLGSQ---CRPCPC 913
Query: 94 SQ-------FG-SVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPC 145
+ F S +D C C G G +C+EC P P+ PG + +PC
Sbjct: 914 PEGPNSGRHFAASCYQDNRSQQVVCNCNQGYTGPRCDECA-PGYFGDPS--KPGGQCQPC 970
Query: 146 N-------GEPPVINLQTGVELDCGSGANREDCPSDAYCHITQNFARCCRK 189
+P + +TG L C DC + R CRK
Sbjct: 971 RCSNNIDLSDPESCDKRTGQCLKCLYNTEGPDCSVCRSGYYGDASRRNCRK 1021
>ZFIN|ZDB-GENE-030131-9823 [details] [associations]
symbol:lama5 "laminin, alpha 5" species:7955
"Danio rerio" [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0033333 "fin development" evidence=IMP] [GO:0008104 "protein
localization" evidence=IMP] [GO:0035141 "medial fin morphogenesis"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0035138 "pectoral fin morphogenesis" evidence=IMP] [GO:0033334
"fin morphogenesis" evidence=IMP] InterPro:IPR000742
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
PROSITE:PS50026 ZFIN:ZDB-GENE-030131-9823 GO:GO:0008104
GO:GO:0030155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016337 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
eggNOG:COG0419 HOVERGEN:HBG052300 KO:K06240 CTD:3911
OrthoDB:EOG4VHK5G GO:GO:0035138 EMBL:DQ232730 IPI:IPI00734953
RefSeq:NP_001034260.1 UniGene:Dr.12091 ProteinModelPortal:Q2Q1W5
STRING:Q2Q1W5 PRIDE:Q2Q1W5 GeneID:321243 KEGG:dre:321243
NextBio:20807298 ArrayExpress:Q2Q1W5 Bgee:Q2Q1W5 GO:GO:0035141
Uniprot:Q2Q1W5
Length = 3664
Score = 211 (79.3 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 46/137 (33%), Positives = 64/137 (46%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ G+ C T QC CK GV G +CDRCE G +G + GC KC C
Sbjct: 2004 CNCSPCGTAH--CDSHTGQCHCKPGVVGAQCDRCEHGTFGFDSCT-------GCRKCDCD 2054
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINL 154
++ + C+ + G C C+PGV G C++C + NGC E K +P
Sbjct: 2055 ASAALVQACDPVNGACACQPGVNGPNCHQCAPGHWNYSSNGCRK-CECKGGRCDP----- 2108
Query: 155 QTGVELDCGSGANREDC 171
+TG E C +G + C
Sbjct: 2109 RTG-ECRCTTGLTGKQC 2124
Score = 195 (73.7 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 41/115 (35%), Positives = 61/115 (53%)
Query: 30 GCPSTCGCNKLGSTE-D-ACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
GC C C++ G T D +C + QC+C+ + G +CDRC PG++G Y P+
Sbjct: 1507 GC-EMCNCSRPGVTSMDISCDTNNGQCRCRNNIVGRQCDRCFPGFYG------Y-PN--- 1555
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC------LDPNKKLGPNGC 136
C C C++ G+ C+ TGRC+CK V+G +C++C LDP G C
Sbjct: 1556 CRPCNCNEAGTEMNVCDSFTGRCLCKENVEGPRCDQCKLGTFHLDPTNAKGCTKC 1610
Score = 192 (72.6 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 43/107 (40%), Positives = 55/107 (51%)
Query: 26 PDNAGCPSTC--G-CNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYA 82
P + G P C G CN GS + + C C+ V G+ C+RC+P YW LS
Sbjct: 700 PGSYGFP-LCQLGTCNPAGSVHNDILPTVGSCVCRPYVEGVACERCKPLYWNLS------ 752
Query: 83 PD-IDGCLKCGCSQFGSVRE--DCEQMTGRCVCKPGVKGSKCNECLD 126
PD I GC C C+ G++ E +C Q TG+C CKP V CN C D
Sbjct: 753 PDTIYGCSTCDCNTAGTLSEVAECTQRTGQCFCKPNVCSGTCNVCKD 799
Score = 191 (72.3 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 40/101 (39%), Positives = 54/101 (53%)
Query: 26 PDNA-GCPSTCGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYA 82
PD GC STC CN G+ + C + T QC CK V C+ C+ G++ L K S +
Sbjct: 753 PDTIYGC-STCDCNTAGTLSEVAECTQRTGQCFCKPNVCSGTCNVCKDGFFNLQKDSYF- 810
Query: 83 PDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
GC C C GSV + C++ GRC C+P V+G KC +
Sbjct: 811 ----GCQGCQCDIGGSVGQACDERYGRCRCRPNVEGPKCKQ 847
Score = 177 (67.4 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 36/104 (34%), Positives = 53/104 (50%)
Query: 21 TLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISS 80
T + G + C C C+ G + +C T QC C+ G G C++C PGY+ +
Sbjct: 516 TCSHGYFSINC-QRCQCSGQGCLDGSCDAVTGQCVCRSGFQGYSCEQCAPGYF------N 568
Query: 81 YAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
Y C CGCS GS+ E C+ GRC+C+P G +C++C
Sbjct: 569 YPL----CQYCGCSVVGSIPEMCDP-AGRCLCRPEFTGPRCDQC 607
Score = 174 (66.3 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 40/119 (33%), Positives = 58/119 (48%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ S + +C E +QC C+ G +C +C PGY+ SY P C C CS
Sbjct: 620 CTCDPRTSLDSSCSE-LDQCNCRPNYSGPRCQQCAPGYY------SY-PS---CTPCDCS 668
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVIN 153
GS C+ ++G+CVC P ++G +C+ C P G G P ++ CN V N
Sbjct: 669 VEGSRSSSCDPVSGQCVCLPNIEGQRCDSC-SP----GSYG-FPLCQLGTCNPAGSVHN 721
Score = 169 (64.5 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 38/117 (32%), Positives = 51/117 (43%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC C C+ + AC C C+ GV G C +C PG+W S +GC
Sbjct: 2047 GCRK-CDCDASAALVQACDPVNGACACQPGVNGPNCHQCAPGHWNYSS--------NGCR 2097
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCN 146
KC C G C+ TG C C G+ G +C+ CL + NG M +PC+
Sbjct: 2098 KCECK--GG---RCDPRTGECRCTTGLTGKQCDTCLSQHSVPVQNGA--DMHCQPCD 2147
Score = 158 (60.7 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 31/92 (33%), Positives = 45/92 (48%)
Query: 35 CGCNKLGSTEDACIED--TEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
C CN G+ ++C D T C CK G CD C GY+ ++ C +C
Sbjct: 482 CECNAAGTEGNSCRPDPRTNTCVCKPEFTGEHCDTCSHGYFSIN-----------CQRCQ 530
Query: 93 CSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
CS G + C+ +TG+CVC+ G +G C +C
Sbjct: 531 CSGQGCLDGSCDAVTGQCVCRSGFQGYSCEQC 562
Score = 147 (56.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 35/110 (31%), Positives = 49/110 (44%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C +L+ +N P CGC+++G+ D C QC+C+ V G C +C GY+G
Sbjct: 1403 CLSSAVSLSSFFNNGAVP--CGCHEVGAESDTCESFGGQCRCRPNVIGRDCSQCATGYYG 1460
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
P+ C C C GS CE +TG C+C P C C
Sbjct: 1461 F-------PN---CRPCNC---GS--RLCEPVTGECICPPRTLQPDCVTC 1495
Score = 146 (56.5 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 35/112 (31%), Positives = 46/112 (41%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ GS +C + QC C + G +CD C PG +G C C+
Sbjct: 665 CDCSVEGSRSSSCDPVSGQCVCLPNIEGQRCDSCSPGSYGFPL----------CQLGTCN 714
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCN 146
GSV D G CVC+P V+G C C L P+ + G CN
Sbjct: 715 PAGSVHNDILPTVGSCVCRPYVEGVACERCKPLYWNLSPD-TIYGCSTCDCN 765
Score = 140 (54.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 37/132 (28%), Positives = 54/132 (40%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
+G+ + C+ +Y PD+ + P C S C C TE C + T +C CK
Sbjct: 393 TGVNCERCIPGYYRS-PDHPL--ESP--FAC-SKCQCES-EFTEGTCEDRTGRCYCKPNY 445
Query: 61 GGLKCDRCEPGYWGLSKI------SSYAPDIDGCLKCGCSQFGSVREDC--EQMTGRCVC 112
G CD+C GY + P + + C C+ G+ C + T CVC
Sbjct: 446 TGENCDQCAEGYEHFPECYQVLINGEVRPAGENIIDCECNAAGTEGNSCRPDPRTNTCVC 505
Query: 113 KPGVKGSKCNEC 124
KP G C+ C
Sbjct: 506 KPEFTGEHCDTC 517
Score = 140 (54.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 39/125 (31%), Positives = 57/125 (45%)
Query: 55 KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC-SQFGSVREDCEQMTGRCVCK 113
+C+ G+ C+RC PGY+ +P C KC C S+F CE TGRC CK
Sbjct: 387 ECQHHTTGVNCERCIPGYYRSPDHPLESPF--ACSKCQCESEF--TEGTCEDRTGRCYCK 442
Query: 114 PGVKGSKCNECLDPNKKLGPNGCMPGM---EVKPCNGEPPVINLQTGVELDCGS-GANRE 169
P G C++C + + P C + EV+P GE N+ ++ +C + G
Sbjct: 443 PNYTGENCDQCAEGYEHF-PE-CYQVLINGEVRPA-GE----NI---IDCECNAAGTEGN 492
Query: 170 DCPSD 174
C D
Sbjct: 493 SCRPD 497
Score = 136 (52.9 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 31/104 (29%), Positives = 50/104 (48%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
CGC+ +GS + C + +C C+ G +CD+C+ G+ SY P+ C C C
Sbjct: 575 CGCSVVGSIPEMC-DPAGRCLCRPEFTGPRCDQCQSGF------HSY-PN---CQVCTCD 623
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP 138
S+ C ++ +C C+P G +C +C P P+ C P
Sbjct: 624 PRTSLDSSCSELD-QCNCRPNYSGPRCQQCA-PGYYSYPS-CTP 664
Score = 136 (52.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 55/202 (27%), Positives = 76/202 (37%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCN-KLGSTEDA--CIE--DTEQCK 55
+G + + CL ++ N T+ G + C S+C C ++ S A C+E + +C
Sbjct: 1867 AGNHCEKCLGGFH----HNNTV-DG-HSVSC-SSCPCPLQVASNNFAIRCVEKPNNMRCL 1919
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC---SQFGSVREDCEQMTGRCV- 111
C G G KC+RC PGY+G + C C C S + DC +TG C
Sbjct: 1920 CMPGYAGSKCERCAPGYYGNPVVIGST-----CQPCNCNGNSDPNMLFSDCHPLTGECQS 1974
Query: 112 CKPGVKGSKCNECLDP--NKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANRE 169
C G C C + C PC + TG + C G
Sbjct: 1975 CMHNTAGPHCEICAPGFYGDAITAKNCTR-CNCSPCGTAH--CDSHTG-QCHCKPGVVGA 2030
Query: 170 DCPSDAYCHITQNFARC--CRK 189
C D H T F C CRK
Sbjct: 2031 QC--DRCEHGTFGFDSCTGCRK 2050
Score = 135 (52.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 46/152 (30%), Positives = 66/152 (43%)
Query: 2 GIYL-KSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQG 59
G YL SC G DNK L G C C CN G + D C++ + C C+
Sbjct: 1814 GNYLGDSCQQCAPGYYRDNKGLFLGK----CVP-CNCN--GHS-DQCLDGSGICVNCRHN 1865
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPDIDGC---LKCGCSQFGSVREDCEQMTG--RCVCKP 114
G C++C G+ + + ++ C L+ + F ++R C + RC+C P
Sbjct: 1866 TAGNHCEKCLGGFHHNNTVDGHSVSCSSCPCPLQVASNNF-AIR--CVEKPNNMRCLCMP 1922
Query: 115 GVKGSKCNECLDPNKKLGPNGCMPGMEVKPCN 146
G GSKC C P G N + G +PCN
Sbjct: 1923 GYAGSKCERCA-PGY-YG-NPVVIGSTCQPCN 1951
Score = 113 (44.8 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 30/97 (30%), Positives = 42/97 (43%)
Query: 86 DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPC 145
+G + CGC + G+ + CE G+C C+P V G C++C PN C +PC
Sbjct: 1416 NGAVPCGCHEVGAESDTCESFGGQCRCRPNVIGRDCSQCATGYYGF-PN-C------RPC 1467
Query: 146 NGEPPVINLQTGVELDCGSGANREDC----PSDAYCH 178
N + TG E C + DC P CH
Sbjct: 1468 NCGSRLCEPVTG-ECICPPRTLQPDCVTCEPQTFGCH 1503
Score = 83 (34.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 19/58 (32%), Positives = 26/58 (44%)
Query: 16 CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C D Q GC C C+ GS AC E +C+C+ V G KC + P ++
Sbjct: 797 CKDGFFNLQKDSYFGCQG-CQCDIGGSVGQACDERYGRCRCRPNVEGPKCKQPRPDHY 853
Score = 40 (19.1 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 135 GCMPGMEVKPCNGEPPVI-NLQTGVE 159
GC+ +K N EP ++ +L+T +E
Sbjct: 3242 GCISNFFIKRAN-EPQIVEDLKTALE 3266
Score = 35 (17.4 bits), Expect = 7.7e-14, Sum P(2) = 7.7e-14
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 152 INLQTGVELDCGSG 165
+ +Q V LD GSG
Sbjct: 3511 LEIQLEVRLDSGSG 3524
>ZFIN|ZDB-GENE-060118-1 [details] [associations]
symbol:lama1 "laminin, alpha 1" species:7955 "Danio
rerio" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0030903 "notochord development"
evidence=IMP] [GO:0048514 "blood vessel morphogenesis"
evidence=IGI] [GO:0001568 "blood vessel development" evidence=IGI]
[GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0001764 "neuron migration" evidence=IGI;IMP]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
ZFIN:ZDB-GENE-060118-1 GO:GO:0001764 GO:GO:0030155 GO:GO:0048514
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0043010 GO:GO:0030334
GO:GO:0008045 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031290 Pfam:PF02210
GO:GO:0045995 GO:GO:0030903 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0007634
CTD:284217 HOVERGEN:HBG052298 KO:K05637 OrthoDB:EOG4K3KVB
GO:GO:0005606 EMBL:DQ131910 IPI:IPI00492896 RefSeq:NP_001030158.1
UniGene:Dr.94156 ProteinModelPortal:Q45H72 SMR:Q45H72 STRING:Q45H72
GeneID:569971 KEGG:dre:569971 NextBio:20889926 Uniprot:Q45H72
Length = 3075
Score = 210 (79.0 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 60/190 (31%), Positives = 81/190 (42%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
+G + + C D +YG K C + CGC GS C T QC+CK V
Sbjct: 881 AGPHCERCRDGYYGDAIQEKN---------CQA-CGCYSNGSLSTICNLITGQCECKHNV 930
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSK 120
G CDRC+ GY G++ S +GC C C+Q G++ C++ GRC C GV G K
Sbjct: 931 VGKTCDRCQEGYHGIN--SG-----EGCRPCECNQSGALSASCDE-EGRCQCITGVTGDK 982
Query: 121 CNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGS---GANREDCPSDAYC 177
C+ C NGC + +G N QTG E C G E C +
Sbjct: 983 CDRCHHGYYNFKENGCT-ACDCAHTHGN---CNGQTG-ECICPPHTHGLKCEQCDEGHWG 1037
Query: 178 HITQNFARCC 187
H + + C
Sbjct: 1038 HDGVSGCKVC 1047
Score = 173 (66.0 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 37/97 (38%), Positives = 51/97 (52%)
Query: 33 STCGCNKLG-STEDACIEDTE---QC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
S C C G S C+ + +C +C++G G C+RC GY+G + P
Sbjct: 1454 SLCACPLRGQSFSSTCVLEGAGDFRCDRCEEGYEGRYCERCAVGYFG----NPSEPG-GR 1508
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C C CS+ GSV C+ TGRC CKPGV+G C++C
Sbjct: 1509 CQVCACSESGSVHSVCDAHTGRCECKPGVRGHLCDQC 1545
Score = 160 (61.4 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 46/163 (28%), Positives = 64/163 (39%)
Query: 33 STCGCNKLGSTEDA--CIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
S C CN +A C T +C KC G C+RC GY+G I C
Sbjct: 850 SPCECNGNVDPSEAGRCDTHTGECLKCVGHTAGPHCERCRDGYYG-DAIQE-----KNCQ 903
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCN-GE 148
CGC GS+ C +TG+C CK V G C+ C + G +G G +PC +
Sbjct: 904 ACGCYSNGSLSTICNLITGQCECKHNVVGKTCDRCQE-----GYHGINSGEGCRPCECNQ 958
Query: 149 PPVINLQTGVE--LDCGSGANREDCPS--DAYCHITQNFARCC 187
++ E C +G + C Y + +N C
Sbjct: 959 SGALSASCDEEGRCQCITGVTGDKCDRCHHGYYNFKENGCTAC 1001
Score = 157 (60.3 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 40/118 (33%), Positives = 53/118 (44%)
Query: 25 GPDN-AGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAP 83
G D +GC C C+ +GS+ C + QC C GL CDRC GY + S+
Sbjct: 1037 GHDGVSGC-KVCNCSVVGSSSSQCDLSSGQCVCALQFSGLTCDRCALGYRNFPQCSACDC 1095
Query: 84 DIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPN---KKLGPNGCMP 138
+ +G C + V CE G+C CK V G C+EC + L P GC P
Sbjct: 1096 NPNGTRAQFCDEALGVC-GCEDH-GQCSCKDNVGGRGCDECKSGSFGLSALNPAGCSP 1151
Score = 143 (55.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 48/152 (31%), Positives = 62/152 (40%)
Query: 1 SGIYLKSCLDSWYGCCPDNKT-LAQGPDNAGCPSTCGCNKLGSTEDACIEDTE------- 52
+G+ ++C D +Y P + A+ P C C C+ GS CI D
Sbjct: 376 AGVNCETCADGYYR--PHQVSPYAEEP----CVE-CQCDMRGSVSPVCIRDDNHANPDAG 428
Query: 53 ----QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED-CEQMT 107
QC CK+G G KCDRC G+ D C +C C+ GS D C +
Sbjct: 429 LSPGQCVCKEGFAGEKCDRCAFGF----------RDFPVCSRCECNLDGSHNTDPCME-- 476
Query: 108 GRCVCKPGVKGSKCNECLDPNKKL---GPNGC 136
CVCK V GS C+ C L P GC
Sbjct: 477 --CVCKANVMGSHCDLCKQGFYNLQASNPEGC 506
Score = 126 (49.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 52 EQCKCKQGVGGLKCDRCEPGYW--GLSKISSYA---PDIDGCLKCGCSQFGSVREDCEQM 106
E C+C G GL C C PGY+ +S+++ P I C+ C CS + C+
Sbjct: 1363 EICECPPGYAGLSCQECAPGYYRQAVSELNMKGRNRPLIQPCVPCRCSNHS---QSCDLH 1419
Query: 107 TGRCV-CKPGVKGSKCNEC 124
TG+C+ C+ G C+ C
Sbjct: 1420 TGQCLGCQHNTAGEHCHVC 1438
Score = 119 (46.9 bits), Expect = 0.00043, P = 0.00043
Identities = 49/159 (30%), Positives = 63/159 (39%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C CN +TE C + E C G CD+C PG++G S PD C +C C
Sbjct: 745 CECND-HATE--CDINGECLGCAHNTTGPHCDQCLPGFYG--DASEGTPD--DCQRCSCP 797
Query: 95 ---QFGSVREDCE-QMTGRCVC---KPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPC-- 145
+ C+ Q G +C + G G KC C D G +PG PC
Sbjct: 798 LTLASNNFSPTCQLQAPGEFICDQCQSGYTGDKCQRCADGY--FG-EPVVPGQRCSPCEC 854
Query: 146 NG-----EPPVINLQTGVELDC-G--SGANREDCPSDAY 176
NG E + TG L C G +G + E C D Y
Sbjct: 855 NGNVDPSEAGRCDTHTGECLKCVGHTAGPHCERC-RDGY 892
Score = 113 (44.8 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 30/76 (39%), Positives = 38/76 (50%)
Query: 33 STCGCNKLGS-TEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKC 91
S C CN GS D C+E C CK V G CD C+ G++ L A + +GC +C
Sbjct: 459 SRCECNLDGSHNTDPCME----CVCKANVMGSHCDLCKQGFYNLQ-----ASNPEGCTEC 509
Query: 92 GCSQFGSVREDCEQMT 107
C FG V + CE T
Sbjct: 510 FC--FG-VSDVCESST 522
Score = 57 (25.1 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 20/79 (25%), Positives = 28/79 (35%)
Query: 102 DCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGC-MPGME---VKPC-----NGEPPVI 152
D ++ C C PG G C EC + + M G ++PC +
Sbjct: 1357 DVARLVEICECPPGYAGLSCQECAPGYYRQAVSELNMKGRNRPLIQPCVPCRCSNHSQSC 1416
Query: 153 NLQTGVELDCGSGANREDC 171
+L TG L C E C
Sbjct: 1417 DLHTGQCLGCQHNTAGEHC 1435
Score = 35 (17.4 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 161 DCGSGANREDCP 172
D GSG NR + P
Sbjct: 2185 DAGSGHNRLEYP 2196
>RGD|2988 [details] [associations]
symbol:Lamb2 "laminin, beta 2" species:10116 "Rattus norvegicus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=ISO] [GO:0005178 "integrin binding" evidence=ISO]
[GO:0005604 "basement membrane" evidence=IEA;ISO] [GO:0005605 "basal
lamina" evidence=ISO] [GO:0005608 "laminin-3 complex" evidence=ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon guidance"
evidence=ISO] [GO:0007528 "neuromuscular junction development"
evidence=ISO] [GO:0007601 "visual perception" evidence=ISO]
[GO:0014002 "astrocyte development" evidence=ISO] [GO:0014044
"Schwann cell development" evidence=ISO] [GO:0031175 "neuron
projection development" evidence=ISO] [GO:0043256 "laminin complex"
evidence=ISO] [GO:0045202 "synapse" evidence=ISO] [GO:0048677 "axon
extension involved in regeneration" evidence=ISO] [GO:0050808
"synapse organization" evidence=ISO] [GO:0060041 "retina development
in camera-type eye" evidence=ISO] [GO:0072249 "metanephric glomerular
visceral epithelial cell development" evidence=ISO] [GO:0072274
"metanephric glomerular basement membrane development" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=ISO] RGD:2988
GO:GO:0007155 PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 InterPro:IPR013015 PROSITE:PS51116 HOVERGEN:HBG052301
CTD:3913 KO:K06243 EMBL:X16563 IPI:IPI00212868 PIR:S03539
RefSeq:NP_037106.1 UniGene:Rn.774 ProteinModelPortal:P15800
PhosphoSite:P15800 PRIDE:P15800 GeneID:25473 KEGG:rno:25473
NextBio:606781 Genevestigator:P15800 Uniprot:P15800
Length = 1801
Score = 207 (77.9 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 50/145 (34%), Positives = 66/145 (45%)
Query: 28 NAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
N P C C+ GS C QC+CK GV G +CD C GY+G + P G
Sbjct: 781 NGALP--CQCDPQGSLSSECNPHGGQCRCKPGVVGRRCDACATGYYG------FGPA--G 830
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLG-PNGCMPGMEVKPCN 146
C C CS G++ CE +G+C+C+ G G +C+ C + G PN C P + CN
Sbjct: 831 CQACQCSPDGALSALCEGTSGQCLCRTGAFGLRCDHC--QRGQWGFPN-CRPCV----CN 883
Query: 147 GEPPVINLQTGVELDCGSGANREDC 171
G + TG L C E C
Sbjct: 884 GRADECDAHTGACLGCRDYTGGEHC 908
Score = 189 (71.6 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 42/124 (33%), Positives = 59/124 (47%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDA--CIEDTEQCKCKQG 59
G + C D ++G N P GC C CN G+ C + C CK+
Sbjct: 449 GTRCQQCRDGFFGLSASN------P--RGC-QRCQCNSRGTVPGGTPCDSSSGTCFCKRL 499
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGS 119
V G CDRC PG+WGLS D+ GC C C G++ C++ TG+C C+P + G
Sbjct: 500 VTGDGCDRCLPGHWGLSH------DLLGCRPCDCDVGGALDPQCDEATGQCPCRPHMIGR 553
Query: 120 KCNE 123
+C +
Sbjct: 554 RCEQ 557
Score = 177 (67.4 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 36/110 (32%), Positives = 48/110 (43%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P+ G GC C C+ + C E T QC C G GG C C+ +WG
Sbjct: 1082 CAPNFWNFTSG---RGC-QPCACHPSRARGPTCNEFTGQCHCHAGFGGRTCSECQELHWG 1137
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
P + C C C G + C + TG C C+PGV G +C++C
Sbjct: 1138 -------DPGLQ-CRACDCDPRGIDKPQCHRSTGHCSCRPGVSGVRCDQC 1179
Score = 168 (64.2 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 46/152 (30%), Positives = 62/152 (40%)
Query: 25 GPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
G D CPST C+ C T QC C V GL CDRC P +W +
Sbjct: 1047 GTDPQRCPSTDLCH--------CDPSTGQCPCLPHVQGLSCDRCAPNFWNFTSGR----- 1093
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKP 144
GC C C + C + TG+C C G G C+EC + + G PG++ +
Sbjct: 1094 --GCQPCACHPSRARGPTCNEFTGQCHCHAGFGGRTCSECQELH--WGD----PGLQCRA 1145
Query: 145 CNGEP-----PVINLQTGVELDCGSGANREDC 171
C+ +P P + TG C G + C
Sbjct: 1146 CDCDPRGIDKPQCHRSTG-HCSCRPGVSGVRC 1176
Score = 164 (62.8 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 41/125 (32%), Positives = 60/125 (48%)
Query: 27 DNAGCPSTCGCNKLGSTEDA-CIEDTE--------QCKCKQGVGGLKCDRCEPGYWGLSK 77
D A C C C+ +GS + C + QC+CK+ V G +C +C G++GLS
Sbjct: 406 DPAAC-RPCDCDPMGSQDGGRCDSHDDPVLGLVSGQCRCKEHVVGTRCQQCRDGFFGLS- 463
Query: 78 ISSYAPDIDGCLKCGCSQFGSVR--EDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN- 134
A + GC +C C+ G+V C+ +G C CK V G C+ CL + L +
Sbjct: 464 ----ASNPRGCQRCQCNSRGTVPGGTPCDSSSGTCFCKRLVTGDGCDRCLPGHWGLSHDL 519
Query: 135 -GCMP 138
GC P
Sbjct: 520 LGCRP 524
Score = 140 (54.3 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 44/150 (29%), Positives = 61/150 (40%)
Query: 35 CGCN-KLGSTED-ACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKC 91
C C+ + T+ AC T QC +C G C C+PG+ G + S C +C
Sbjct: 989 CECSGNIDPTDPGACDPHTGQCLRCLHHTEGPHCGHCKPGFHGQAARQS-------CHRC 1041
Query: 92 GCSQFGSVRE-----D---CEQMTGRCVCKPGVKGSKCNECLDPN--KKLGPNGCMPGME 141
C+ G+ + D C+ TG+C C P V+G C+ C PN GC P
Sbjct: 1042 TCNLLGTDPQRCPSTDLCHCDPSTGQCPCLPHVQGLSCDRCA-PNFWNFTSGRGCQP-CA 1099
Query: 142 VKPCNGEPPVINLQTGVELDCGSGANREDC 171
P P N TG + C +G C
Sbjct: 1100 CHPSRARGPTCNEFTG-QCHCHAGFGGRTC 1128
Score = 125 (49.1 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 34/110 (30%), Positives = 48/110 (43%)
Query: 78 ISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCM 137
IS+ + +G L C C GS+ +C G+C CKPGV G +C+ C GP GC
Sbjct: 773 ISASSLVYNGALPCQCDPQGSLSSECNPHGGQCRCKPGVVGRRCDACATGYYGFGPAGCQ 832
Query: 138 PGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSDAYCHITQ-NFARC 186
+ P +G + T + C +GA C +C Q F C
Sbjct: 833 -ACQCSP-DGALSALCEGTSGQCLCRTGAFGLRCD---HCQRGQWGFPNC 877
Score = 98 (39.6 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C P + L+ D GC C C+ G+ + C E T QC C+ + G +C++ +PGY+
Sbjct: 508 CLPGHWGLSH--DLLGC-RPCDCDVGGALDPQCDEATGQCPCRPHMIGRRCEQVQPGYF 563
>ZFIN|ZDB-GENE-021226-2 [details] [associations]
symbol:lamb4 "laminin, beta 4" species:7955 "Danio
rerio" [GO:0005576 "extracellular region" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] ZFIN:ZDB-GENE-021226-2 GO:GO:0007155 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604 HSSP:P02468
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOGENOM:HOG000007552 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 EMBL:AF468050 IPI:IPI00485935 RefSeq:NP_775383.1
UniGene:Dr.120997 ProteinModelPortal:Q8JHV6 STRING:Q8JHV6
PRIDE:Q8JHV6 GeneID:286831 KEGG:dre:286831 CTD:22798
eggNOG:NOG303831 InParanoid:Q8JHV6 KO:K06245 OrthoDB:EOG41G346
NextBio:20806482 ArrayExpress:Q8JHV6 Uniprot:Q8JHV6
Length = 1827
Score = 206 (77.6 bits), Expect = 5.1e-15, P = 5.1e-15
Identities = 45/142 (31%), Positives = 67/142 (47%)
Query: 27 DNAGCPSTCGCNKLGSTE--DACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
D +GC C CN LG+ + + C T +C C+ G +CD+C PGYWGL
Sbjct: 442 DPSGC-QLCRCNFLGTIQVGNPCDPTTGRCICEHFAYGSQCDQCLPGYWGLGNT------ 494
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGP--------NGC 136
+ GC+ C C G+++ +C + G+C C+P + G KCN+ P L P
Sbjct: 495 VYGCIPCDCDIGGALKTECSSVDGQCKCRPNMVGQKCNDPA-PGYFLAPLDFYIYEAENA 553
Query: 137 MPGMEVKPCNGEPPVINLQTGV 158
P + P G PP + G+
Sbjct: 554 APLAVISPFIGPPPFVYPTEGI 575
Score = 197 (74.4 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 50/141 (35%), Positives = 68/141 (48%)
Query: 34 TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
+C C+ +G+ +C + QC+CK V G CD C P +GL P+ GC C C
Sbjct: 852 SCNCHHVGAYGSSCSKFGGQCQCKPNVIGRCCDSCAPLTYGLG------PN--GCSPCDC 903
Query: 94 SQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVIN 153
+ GS E C+Q TG+C C+ G+ G +CN C P G G P CN + +
Sbjct: 904 DRSGSTTELCDQTTGQCSCRDGITGLQCNRCY-P----GYYG-FPLCRRCQCNRLADICD 957
Query: 154 LQTGVELDC---GSGANREDC 171
TG LDC +G N E C
Sbjct: 958 PITGDCLDCREHSAGRNCERC 978
Score = 197 (74.4 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 49/146 (33%), Positives = 67/146 (45%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC C CN+ + C + T QC C+ GG CD C P ++G PD+ C+
Sbjct: 1159 GC-QPCNCNREHALNYICDKITGQCLCQPEYGGRICDECGPNHFG-------NPDLQ-CM 1209
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEP 149
C C+ G+V C+ TG C+CKPGV G C+EC P G N P E PC+
Sbjct: 1210 FCDCNLEGTVHPACDAYTGECLCKPGVTGPFCDECA-P----GHNNNFPACE--PCHACN 1262
Query: 150 PVIN-LQTGVELDCGSGANREDCPSD 174
+ + + + LD CP D
Sbjct: 1263 HLWEKIISDLSLDAERIETMMPCPED 1288
Score = 196 (74.1 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 40/109 (36%), Positives = 59/109 (54%)
Query: 35 CGCNKLGSTEDA-CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C C+ GS + C QC CKQ + G +CDRC+ G++G S+ D GC C C
Sbjct: 397 CDCDLDGSVDRGLCDPVNGQCVCKQNIEGERCDRCKVGFYGFSR-----DDPSGCQLCRC 451
Query: 94 SQFGSVR--EDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN--GCMP 138
+ G+++ C+ TGRC+C+ GS+C++CL LG GC+P
Sbjct: 452 NFLGTIQVGNPCDPTTGRCICEHFAYGSQCDQCLPGYWGLGNTVYGCIP 500
Score = 194 (73.4 bits), Expect = 9.6e-14, P = 9.6e-14
Identities = 38/111 (34%), Positives = 55/111 (49%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
CC L G GC S C C++ GST + C + T QC C+ G+ GL+C+RC PGY+G
Sbjct: 882 CCDSCAPLTYGLGPNGC-SPCDCDRSGSTTELCDQTTGQCSCRDGITGLQCNRCYPGYYG 940
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNEC 124
C +C C++ + C+ +TG C+ C+ G C C
Sbjct: 941 FPL----------CRRCQCNRLADI---CDPITGDCLDCREHSAGRNCERC 978
Score = 193 (73.0 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 44/138 (31%), Positives = 68/138 (49%)
Query: 6 KSCLDSWYGC-----CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
+SC +YG C + +G D++ CP+ C C +DT QC C+ GV
Sbjct: 1088 QSCKRGYYGNALAQDCKECSCDRRGTDDSKCPAGSPC--------FCDQDTGQCPCRPGV 1139
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSK 120
G C+ C+ GYW + Y GC C C++ ++ C+++TG+C+C+P G
Sbjct: 1140 QGALCNECDDGYWNMD--GDY-----GCQPCNCNREHALNYICDKITGQCLCQPEYGGRI 1192
Query: 121 CNECLDPNKKLGPN-GCM 137
C+EC PN P+ CM
Sbjct: 1193 CDEC-GPNHFGNPDLQCM 1209
Score = 166 (63.5 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 40/119 (33%), Positives = 58/119 (48%)
Query: 31 CPSTCGCNKLGSTE-DACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
C C N + + DAC T +C +C G +C C+ GY+G ++ A D C
Sbjct: 1051 CKECCCNNNIDPRDGDACDPVTGECLRCLHNTEGPRCQSCKRGYYG----NALAQD---C 1103
Query: 89 LKCGCSQFGSVREDC--------EQMTGRCVCKPGVKGSKCNECLDPNKKL-GPNGCMP 138
+C C + G+ C +Q TG+C C+PGV+G+ CNEC D + G GC P
Sbjct: 1104 KECSCDRRGTDDSKCPAGSPCFCDQDTGQCPCRPGVQGALCNECDDGYWNMDGDYGCQP 1162
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 26/86 (30%), Positives = 36/86 (41%)
Query: 86 DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPC 145
+G + C C G+ C + G+C CKP V G C+ C LGPNGC P +
Sbjct: 848 NGAVSCNCHHVGAYGSSCSKFGGQCQCKPNVIGRCCDSCAPLTYGLGPNGCSP-CDCDRS 906
Query: 146 NGEPPVINLQTGVELDCGSGANREDC 171
+ + TG + C G C
Sbjct: 907 GSTTELCDQTTG-QCSCRDGITGLQC 931
Score = 123 (48.4 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 41/142 (28%), Positives = 56/142 (39%)
Query: 53 QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVC 112
+C C+ G C+RC+ Y D D C +C C S E C R +
Sbjct: 296 RCVCQHNTAGYNCERCQDFYHDAPWRPGGKADSDVCKRCNCH---SHSEKCHFELARYLA 352
Query: 113 KPGVKGSKCNECLDPNKKLGPNG--CMPGMEVKPCNG-EPPVINLQTGVELDCGSGANRE 169
GV G C++C N ++GP C P P + P + +LD GS +R
Sbjct: 353 TGGVSGGVCDDCR--NNRIGPQCELCGPFYYQDPQRSVDDPYACIPCDCDLD-GS-VDRG 408
Query: 170 DC-PSDAYCHITQNFA--RCCR 188
C P + C QN RC R
Sbjct: 409 LCDPVNGQCVCKQNIEGERCDR 430
>UNIPROTKB|E1C700 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005178 "integrin binding" evidence=IEA] [GO:0005608
"laminin-3 complex" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0014044
"Schwann cell development" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0048677 "axon extension involved in regeneration"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0072249 "metanephric glomerular visceral
epithelial cell development" evidence=IEA] [GO:0072274 "metanephric
glomerular basement membrane development" evidence=IEA]
GO:GO:0050808 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0005608 GeneTree:ENSGT00620000087753 InterPro:IPR013015
PROSITE:PS51116 OMA:QPYCIVS EMBL:AADN02014165 EMBL:AADN02014166
EMBL:AADN02014167 EMBL:AADN02014168 EMBL:AADN02014169
EMBL:AADN02014170 IPI:IPI00820014 ProteinModelPortal:E1C700
Ensembl:ENSGALT00000036239 ArrayExpress:E1C700 Uniprot:E1C700
Length = 1773
Score = 204 (76.9 bits), Expect = 8.0e-15, P = 8.0e-15
Identities = 52/151 (34%), Positives = 66/151 (43%)
Query: 28 NAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
N P C C+ G C QC+CK V G +C RC PG +G + P G
Sbjct: 755 NGALP--CLCDPQGLLSAECQPQGGQCRCKPNVVGRRCHRCSPGTFG------FGPG--G 804
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNG 147
C C CS GS+ C+ +TG+C C+ G GS+C+ C P P C P CNG
Sbjct: 805 CRPCQCSGEGSLSAVCDTITGQCPCRQGAHGSRCDRC-QPGHWGFPT-CRPCQ----CNG 858
Query: 148 EPPVINLQTGVELDCGSGANREDCPSDAYCH 178
+ QTG L C + E C A H
Sbjct: 859 HAEECDPQTGSCLRCRDHTDGERCQRCAAGH 889
Score = 187 (70.9 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 41/134 (30%), Positives = 56/134 (41%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P+ L G GC C C+ S AC + T QC C+ G GG C C+ +WG
Sbjct: 1055 CSPNFWNLGSGQ---GC-EPCACHPQHSLSPACNQFTGQCSCRPGFGGRTCANCQEQHWG 1110
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN 134
++ C C C G C +G C C+PG+ G +C++C P
Sbjct: 1111 DPRLQ--------CRACDCDPRGIASTQCHHGSGHCDCRPGISGVRCDQCARGFSGTFP- 1161
Query: 135 GCMPGMEVKPCNGE 148
C P PC G+
Sbjct: 1162 ACQP---CHPCFGD 1172
Score = 186 (70.5 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 42/117 (35%), Positives = 62/117 (52%)
Query: 35 CGCNKLGSTED-ACIEDTE--------QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
C C+ GS + AC T+ QC+CK+ V G +CDRC+ G +GLS+ D
Sbjct: 392 CDCDPAGSLDGGACDAHTDVALGMIAGQCRCKENVAGPRCDRCQHGAYGLSQ-----GDP 446
Query: 86 DGCLKCGCSQFGSVRE--DCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN--GCMP 138
GC +C C G+V + C+ ++G C+CK V G C++CL + L + GC P
Sbjct: 447 QGCQRCLCDPRGTVADGSQCDPISGDCLCKRLVTGRSCDQCLPEHWALSHDLPGCQP 503
Score = 183 (69.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 45/132 (34%), Positives = 58/132 (43%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P T GP GC C C+ GS C T QC C+QG G +CDRC+PG+WG
Sbjct: 793 CSPG--TFGFGP--GGC-RPCQCSGEGSLSAVCDTITGQCPCRQGAHGSRCDRCQPGHWG 847
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNECLDPNKKLGP 133
P C C C+ G E+C+ TG C+ C+ G +C C + G
Sbjct: 848 F-------PT---CRPCQCN--GHA-EECDPQTGSCLRCRDHTDGERCQRCAAGH--FGN 892
Query: 134 NGCMPGMEVKPC 145
G +PC
Sbjct: 893 PALGSGQHCRPC 904
Score = 169 (64.5 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 40/124 (32%), Positives = 55/124 (44%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVG---------GLKCDRCEPGYWGLSKISSYAPDI 85
C CN LG+ + C +QC+C Q G G CDRC P +W L S
Sbjct: 1015 CSCNTLGTDPNTC--GPQQCQCDQRSGQCHCLPHVEGQSCDRCSPNFWNLG--SG----- 1065
Query: 86 DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPC 145
GC C C S+ C Q TG+C C+PG G C C + + G P ++ + C
Sbjct: 1066 QGCEPCACHPQHSLSPACNQFTGQCSCRPGFGGRTCANCQEQH--WGD----PRLQCRAC 1119
Query: 146 NGEP 149
+ +P
Sbjct: 1120 DCDP 1123
Score = 167 (63.8 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 47/149 (31%), Positives = 65/149 (43%)
Query: 35 CGC-NKLGSTE-DACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKC 91
C C N + +T+ +AC T QC +C G C C+PGY+G + S C +C
Sbjct: 963 CQCHNNIDTTDPEACDRRTGQCLRCLYNTAGPHCAECQPGYYGDAMRHS-------CRRC 1015
Query: 92 GCSQFGSVRE-------DCEQMTGRCVCKPGVKGSKCNECLDPNK-KLGPN-GCMPGMEV 142
C+ G+ C+Q +G+C C P V+G C+ C PN LG GC P
Sbjct: 1016 SCNTLGTDPNTCGPQQCQCDQRSGQCHCLPHVEGQSCDRC-SPNFWNLGSGQGCEP-CAC 1073
Query: 143 KPCNGEPPVINLQTGVELDCGSGANREDC 171
P + P N TG + C G C
Sbjct: 1074 HPQHSLSPACNQFTG-QCSCRPGFGGRTC 1101
Score = 164 (62.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 37/108 (34%), Positives = 53/108 (49%)
Query: 22 LAQGPDNAGCPSTCGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKIS 79
L+QG D GC C C+ G+ D C + C CK+ V G CD+C P +W LS
Sbjct: 441 LSQG-DPQGC-QRCLCDPRGTVADGSQCDPISGDCLCKRLVTGRSCDQCLPEHWALSH-- 496
Query: 80 SYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDP 127
D+ GC C C G+ C TG+C C+ + G +C + ++P
Sbjct: 497 ----DLPGCQPCECDVGGAHDNQCAMETGQCRCRSHIVGRQCEQ-VEP 539
Score = 118 (46.6 bits), Expect = 0.00032, P = 0.00032
Identities = 34/113 (30%), Positives = 45/113 (39%)
Query: 19 NKTLAQGPDNAGCPSTCGCNKLGSTEDACIED--TEQ--CKCKQGVGGLKCDRCEPGYWG 74
N L G CP G +C +D + Q C C G G +CD C PGY+G
Sbjct: 892 NPALGSGQHCRPCPCPDGPGGPRHFAASCYQDGRSRQVVCHCSPGYTGPRCDECAPGYYG 951
Query: 75 LSKISSYAPDIDGCLKCGC-SQFGSVR-EDCEQMTGRCV-CKPGVKGSKCNEC 124
P C C C + + E C++ TG+C+ C G C EC
Sbjct: 952 ----DPLQPG-GHCRPCQCHNNIDTTDPEACDRRTGQCLRCLYNTAGPHCAEC 999
>UNIPROTKB|F1MNT4 [details] [associations]
symbol:LAMB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0042476
"odontogenesis" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0007566 "embryo implantation" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] GO:GO:0048471 GO:GO:0005615 GO:GO:0016477
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0042476 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0005201 GO:GO:0043208 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005606
GO:GO:0043259 GeneTree:ENSGT00620000087753 InterPro:IPR013015
PROSITE:PS51116 EMBL:DAAA02010597 EMBL:DAAA02010596 IPI:IPI01017612
Ensembl:ENSBTAT00000015166 OMA:NTWQLAS Uniprot:F1MNT4
Length = 1798
Score = 204 (76.9 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 39/99 (39%), Positives = 55/99 (55%)
Query: 27 DNAGCPSTCGCNKLGSTE--DACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
D GC S C CN LG+ + C +T C CK+ V G CD+C P +WGLS D
Sbjct: 463 DPFGCKS-CACNPLGTIPGGNPCDSETGYCYCKRLVTGQHCDQCLPEHWGLSN------D 515
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
+DGC C C G++ C +G+C+C+P + G +C+E
Sbjct: 516 LDGCRPCDCDIGGALNNSCSAESGQCLCRPHMIGRQCSE 554
Score = 200 (75.5 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 43/124 (34%), Positives = 58/124 (46%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P+ LA G GC C C+ S +C E T QC C G GG C C+ +WG
Sbjct: 1080 CAPNTWQLASG---TGC-DPCSCDAAHSFGPSCNEFTGQCHCMPGFGGRTCSECQELFWG 1135
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN 134
P ++ C C C G C+Q TG+CVC GV+G +C++C + P+
Sbjct: 1136 -------DPSVE-CRACDCDPRGIETPQCDQSTGQCVCVEGVEGPRCDKCTRGYSGVFPD 1187
Query: 135 GCMP 138
C P
Sbjct: 1188 -CTP 1190
Score = 196 (74.1 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 51/145 (35%), Positives = 67/145 (46%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ GS C + QC+C+ V G +CDRC PG +G + P GC C C
Sbjct: 785 CECDPQGSLSSVCDPNGGQCQCRPNVVGRRCDRCAPGTFG------FGPS--GCKPCECH 836
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINL 154
GSV C+ +TG+C C GV +C+ CL P P+ C P CNG +
Sbjct: 837 LQGSVSAFCDPITGQCHCFQGVYTRQCDRCL-PGFWGFPS-CQPCQ----CNGHADDCDS 890
Query: 155 QTGVELDCG---SGANREDCPSDAY 176
TG L C +G N E C + Y
Sbjct: 891 VTGECLSCQDYTTGHNCERCLAGYY 915
Score = 174 (66.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 42/125 (33%), Positives = 55/125 (44%)
Query: 35 CGCNKLGSTED-------ACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
C CN LG+ ++ C + T QC C V G CDRC P W L+ + G
Sbjct: 1040 CVCNYLGTVQEHCNGSDCQCDKTTGQCLCLPNVIGQNCDRCAPNTWQLASGT-------G 1092
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECL-----DPNKKLGPNGCMP-GME 141
C C C S C + TG+C C PG G C+EC DP+ + C P G+E
Sbjct: 1093 CDPCSCDAAHSFGPSCNEFTGQCHCMPGFGGRTCSECQELFWGDPSVECRACDCDPRGIE 1152
Query: 142 VKPCN 146
C+
Sbjct: 1153 TPQCD 1157
Score = 170 (64.9 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 42/112 (37%), Positives = 52/112 (46%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P T GP +GC C C+ GS C T QC C QGV +CDRC PG+WG
Sbjct: 818 CAPG--TFGFGP--SGC-KPCECHLQGSVSAFCDPITGQCHCFQGVYTRQCDRCLPGFWG 872
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNECL 125
P C C C+ G +DC+ +TG C+ C+ G C CL
Sbjct: 873 F-------PS---CQPCQCN--GHA-DDCDSVTGECLSCQDYTTGHNCERCL 911
Score = 163 (62.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 41/117 (35%), Positives = 55/117 (47%)
Query: 35 CGCNKLGSTEDA-CIEDTE--------QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
C C+ GS C T+ QC+CK V G CD C+ G++GLS A D
Sbjct: 410 CTCDPAGSQNGGICDSYTDFSAGLIAGQCRCKLYVEGEHCDICKEGFYGLS-----AEDP 464
Query: 86 DGCLKCGCSQFGSVR--EDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN--GCMP 138
GC C C+ G++ C+ TG C CK V G C++CL + L + GC P
Sbjct: 465 FGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQHCDQCLPEHWGLSNDLDGCRP 521
Score = 154 (59.3 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 47/156 (30%), Positives = 64/156 (41%)
Query: 27 DNAGCPSTCGCNKLGSTED--ACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYAP 83
D G C C+ T D AC ++T +C KC G C C GY+G +
Sbjct: 980 DVGGTCQPCQCHHNIDTADPEACDKETGRCLKCLYHTEGEHCQLCRFGYYG----DALRQ 1035
Query: 84 DIDGCLKCGCSQFGSVRE-------DCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN-G 135
D C KC C+ G+V+E C++ TG+C+C P V G C+ C +L G
Sbjct: 1036 D---CRKCVCNYLGTVQEHCNGSDCQCDKTTGQCLCLPNVIGQNCDRCAPNTWQLASGTG 1092
Query: 136 CMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
C P + P N TG + C G C
Sbjct: 1093 CDP-CSCDAAHSFGPSCNEFTG-QCHCMPGFGGRTC 1126
Score = 141 (54.7 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 54/178 (30%), Positives = 71/178 (39%)
Query: 30 GCPST--CGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
G PS C CN G +D C T +C C+ G C+RC GY+G I S D
Sbjct: 872 GFPSCQPCQCN--GHADD-CDSVTGECLSCQDYTTGHNCERCLAGYYGDPVIGSG----D 924
Query: 87 GCLKCGCS-------QFGS-VREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP 138
C C C QF S +D + CVC PG GS+C+EC + G N
Sbjct: 925 HCRPCPCPDGPESGRQFASSCYQDPVSLQLACVCNPGYIGSRCDECA--SGFFG-NPSDV 981
Query: 139 GMEVKPCN-------GEPPVINLQTGVELDCGSGANREDCPSDAYCHITQNFARCCRK 189
G +PC +P + +TG L C E C + + + CRK
Sbjct: 982 GGTCQPCQCHHNIDTADPEACDKETGRCLKCLYHTEGEHCQLCRFGYYGDALRQDCRK 1039
Score = 114 (45.2 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP 138
L C C GS+ C+ G+C C+P V G +C+ C GP+GC P
Sbjct: 783 LACECDPQGSLSSVCDPNGGQCQCRPNVVGRRCDRCAPGTFGFGPSGCKP 832
Score = 88 (36.0 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C P++ L+ D GC C C+ G+ ++C ++ QC C+ + G +C E GY+
Sbjct: 505 CLPEHWGLSNDLD--GC-RPCDCDIGGALNNSCSAESGQCLCRPHMIGRQCSEVESGYY 560
>UNIPROTKB|F1PEZ5 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 EMBL:AAEX03000448
EMBL:AAEX03000449 EMBL:AAEX03000450 EMBL:AAEX03000451
EMBL:AAEX03000452 EMBL:AAEX03000453 Ensembl:ENSCAFT00000036090
Uniprot:F1PEZ5
Length = 3085
Score = 206 (77.6 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 55/163 (33%), Positives = 76/163 (46%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P+ L G GC C CN GS C E++ QC C+ GV G KCDRC GY+
Sbjct: 914 CKPETFGLQSG---RGCVP-CKCNSFGSKSFDC-EESGQCWCQPGVTGKKCDRCAHGYFN 968
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN 134
+ GC C CS G+ +C+ TG+C+C P G KC++C PN G +
Sbjct: 969 FQE--------GGCTACDCSHLGN---NCDPKTGQCICPPNTVGEKCSKC-SPNT-WG-H 1014
Query: 135 GCMPGMEVKPCNGEPPV---INLQTGVELDCG---SGANREDC 171
+ G + C+ + N+ TG + C SGA +C
Sbjct: 1015 SIITGCKACNCSTVGSLDFQCNINTG-QCSCHPKFSGAKCTEC 1056
Score = 193 (73.0 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 44/123 (35%), Positives = 57/123 (46%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC + C C+ LG+ C T QC C G KC +C P WG S I+ GC
Sbjct: 973 GC-TACDCSHLGNN---CDPKTGQCICPPNTVGEKCSKCSPNTWGHSIIT-------GCK 1021
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPN---KKLGPNGC-MPGMEVKPC 145
C CS GS+ C TG+C C P G+KC EC + P C +PG + + C
Sbjct: 1022 ACNCSTVGSLDFQCNINTGQCSCHPKFSGAKCTECNQGHWNYPHCSPCECFLPGTDDRTC 1081
Query: 146 NGE 148
+ E
Sbjct: 1082 DPE 1084
Score = 178 (67.7 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 39/115 (33%), Positives = 53/115 (46%)
Query: 26 PDNAGCPSTCGCNKLGSTEDACIEDTEQCK-CKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
P + P C N S +C + C+ CK G G +C+ C GY+G A +
Sbjct: 821 PGGSCQPCQCNDNLDFSIPGSCDSLSGSCRICKPGTAGRRCELCADGYFG------DAVE 874
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKL-GPNGCMP 138
C CGC S+ E C TG+C CKP V+G +C+EC L GC+P
Sbjct: 875 AKNCQPCGCHVNSSLSESCHARTGQCECKPNVQGRRCDECKPETFGLQSGRGCVP 929
Score = 161 (61.7 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 42/133 (31%), Positives = 58/133 (43%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ------- 53
+GI ++C+D ++ + P C C+ +GS + C++D ++
Sbjct: 349 AGINCETCIDGFF------RPKGVSPSYPRPCQPCHCDPVGSLNEVCVKDEKRARRGLAP 402
Query: 54 --CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV 111
C CK G G+ CDRC GY G Y PD C C CS GS ED G C
Sbjct: 403 GSCHCKPGFRGVSCDRCARGYTG------Y-PD---CKPCNCSGAGSTNED--PCFGPCN 450
Query: 112 CKPGVKGSKCNEC 124
CK V+G C C
Sbjct: 451 CKENVEGGDCGRC 463
Score = 155 (59.6 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 35/110 (31%), Positives = 47/110 (42%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC + C C+ +GS + C +T QC C G KC C G+W S + G
Sbjct: 1019 GCKA-CNCSTVGSLDFQCNINTGQCSCHPKFSGAKCTECNQGHWNYPHCSPCECFLPGTD 1077
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKL---GPNGC 136
C + + C TG+C CK V+G C+ C N L P GC
Sbjct: 1078 DRTCDP-ETKKCSCVDQTGQCTCKVNVEGVHCDRCRPGNFGLDAKNPLGC 1126
Score = 155 (59.6 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 46/154 (29%), Positives = 68/154 (44%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTED---ACI-E--DTEQC 54
+G + + C +YG + +G N C C C + S+ + +C+ E D +C
Sbjct: 1407 AGDFCERCALGYYG-------IVRGLPN-DCQQ-CACPLISSSNNFSPSCVLEGLDDYRC 1457
Query: 55 K-CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCK 113
C +G G C+RC GY G S +P C +C C GS+ C+ TG C C+
Sbjct: 1458 TACPRGYEGQYCERCSAGYTG----SPRSPG-GTCQECECDPQGSLPLPCDPATGLCTCR 1512
Query: 114 PGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNG 147
PG G KC+ C + + G G E C G
Sbjct: 1513 PGATGPKCDGCQPGHARQGSECVFCGDE---CTG 1543
Score = 137 (53.3 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 39/129 (30%), Positives = 58/129 (44%)
Query: 43 TEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG-CLKCGCSQFGSVRE 101
T+ + E C+C G G C+ C P + +++ G C C C FG E
Sbjct: 676 TDRSIAAAVEVCQCPPGYSGSSCESCWPRH---RRVNGTV--FGGICEPCQC--FGHA-E 727
Query: 102 DCEQMTGRCV-CKPGVKGSKCNECL-----DPNKKLGPNGCMP-GMEVK-PCNGEPPVIN 153
C+ +TG C+ CK G CN+CL DP+K + C+P + P N P +
Sbjct: 728 SCDDLTGECLNCKDHTGGPHCNQCLPGFYGDPSKGTSED-CLPCACPLSIPSNNFSPTCH 786
Query: 154 LQTGVELDC 162
L+ G+ L C
Sbjct: 787 LERGLGLMC 795
Score = 130 (50.8 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 37/111 (33%), Positives = 49/111 (44%)
Query: 1 SGIYLKSCLDS-W-YGCCPDNKTLAQGPDNAGC-PSTCGCNKLGSTEDACIEDTEQCKCK 57
SG C W Y C + G D+ C P T C+ C++ T QC CK
Sbjct: 1049 SGAKCTECNQGHWNYPHCSPCECFLPGTDDRTCDPETKKCS--------CVDQTGQCTCK 1100
Query: 58 QGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTG 108
V G+ CDRC PG +GL A + GC +C C FG+ + C + G
Sbjct: 1101 VNVEGVHCDRCRPGNFGLD-----AKNPLGCSQCYC--FGATTQ-CSEAKG 1143
Score = 117 (46.2 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 26/77 (33%), Positives = 38/77 (49%)
Query: 52 EQCKCKQGVGGLKCDRCEPGYWGL-SKISSYA--PDIDGCLKCGCSQFGSVREDCEQMTG 108
E+C+C G GL C+ C PG++ L S+ S A P + C+ C C S+ C+ T
Sbjct: 1341 ERCECPAGHSGLSCEACGPGFYRLPSEPGSAAARPALGPCVPCQCHGHSSL---CDPETS 1397
Query: 109 RCV-CKPGVKGSKCNEC 124
+C C+ G C C
Sbjct: 1398 KCQNCQHHTAGDFCERC 1414
Score = 74 (31.1 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 19/64 (29%), Positives = 27/64 (42%)
Query: 110 CVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCN--GEPPVINLQTGVELDCGSGAN 167
C C PG GS C C ++++ NG + G +PC G + TG L+C
Sbjct: 687 CQCPPGYSGSSCESCWPRHRRV--NGTVFGGICEPCQCFGHAESCDDLTGECLNCKDHTG 744
Query: 168 REDC 171
C
Sbjct: 745 GPHC 748
Score = 44 (20.5 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 135 GCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSD 174
GC+ + + G+P +N +EL G CP++
Sbjct: 3049 GCIRSLRLTKGTGKPLEVNFAKALEL---RGVQPVSCPAN 3085
Score = 44 (20.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 18/59 (30%), Positives = 24/59 (40%)
Query: 7 SCLDSWYGC-CPDNKTLAQGPDNAGC-PSTCGC---NKLGSTEDACIEDTEQCKCKQGV 60
SC+D C C N +G C P G N LG ++ C T QC +G+
Sbjct: 1089 SCVDQTGQCTCKVN---VEGVHCDRCRPGNFGLDAKNPLGCSQCYCFGATTQCSEAKGL 1144
>UNIPROTKB|F1PVY5 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 OMA:NCNSFGS
EMBL:AAEX03000448 EMBL:AAEX03000449 EMBL:AAEX03000450
EMBL:AAEX03000451 EMBL:AAEX03000452 EMBL:AAEX03000453
Ensembl:ENSCAFT00000001697 Uniprot:F1PVY5
Length = 3109
Score = 206 (77.6 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 55/163 (33%), Positives = 76/163 (46%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P+ L G GC C CN GS C E++ QC C+ GV G KCDRC GY+
Sbjct: 937 CKPETFGLQSG---RGCVP-CKCNSFGSKSFDC-EESGQCWCQPGVTGKKCDRCAHGYFN 991
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN 134
+ GC C CS G+ +C+ TG+C+C P G KC++C PN G +
Sbjct: 992 FQE--------GGCTACDCSHLGN---NCDPKTGQCICPPNTVGEKCSKC-SPNT-WG-H 1037
Query: 135 GCMPGMEVKPCNGEPPV---INLQTGVELDCG---SGANREDC 171
+ G + C+ + N+ TG + C SGA +C
Sbjct: 1038 SIITGCKACNCSTVGSLDFQCNINTG-QCSCHPKFSGAKCTEC 1079
Score = 193 (73.0 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 44/123 (35%), Positives = 57/123 (46%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC + C C+ LG+ C T QC C G KC +C P WG S I+ GC
Sbjct: 996 GC-TACDCSHLGNN---CDPKTGQCICPPNTVGEKCSKCSPNTWGHSIIT-------GCK 1044
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPN---KKLGPNGC-MPGMEVKPC 145
C CS GS+ C TG+C C P G+KC EC + P C +PG + + C
Sbjct: 1045 ACNCSTVGSLDFQCNINTGQCSCHPKFSGAKCTECNQGHWNYPHCSPCECFLPGTDDRTC 1104
Query: 146 NGE 148
+ E
Sbjct: 1105 DPE 1107
Score = 178 (67.7 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 39/115 (33%), Positives = 53/115 (46%)
Query: 26 PDNAGCPSTCGCNKLGSTEDACIEDTEQCK-CKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
P + P C N S +C + C+ CK G G +C+ C GY+G A +
Sbjct: 844 PGGSCQPCQCNDNLDFSIPGSCDSLSGSCRICKPGTAGRRCELCADGYFG------DAVE 897
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKL-GPNGCMP 138
C CGC S+ E C TG+C CKP V+G +C+EC L GC+P
Sbjct: 898 AKNCQPCGCHVNSSLSESCHARTGQCECKPNVQGRRCDECKPETFGLQSGRGCVP 952
Score = 161 (61.7 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 42/133 (31%), Positives = 58/133 (43%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ------- 53
+GI ++C+D ++ + P C C+ +GS + C++D ++
Sbjct: 354 AGINCETCIDGFF------RPKGVSPSYPRPCQPCHCDPVGSLNEVCVKDEKRARRGLAP 407
Query: 54 --CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV 111
C CK G G+ CDRC GY G Y PD C C CS GS ED G C
Sbjct: 408 GSCHCKPGFRGVSCDRCARGYTG------Y-PD---CKPCNCSGAGSTNED--PCFGPCN 455
Query: 112 CKPGVKGSKCNEC 124
CK V+G C C
Sbjct: 456 CKENVEGGDCGRC 468
Score = 155 (59.6 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 35/110 (31%), Positives = 47/110 (42%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC + C C+ +GS + C +T QC C G KC C G+W S + G
Sbjct: 1042 GCKA-CNCSTVGSLDFQCNINTGQCSCHPKFSGAKCTECNQGHWNYPHCSPCECFLPGTD 1100
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKL---GPNGC 136
C + + C TG+C CK V+G C+ C N L P GC
Sbjct: 1101 DRTCDP-ETKKCSCVDQTGQCTCKVNVEGVHCDRCRPGNFGLDAKNPLGC 1149
Score = 155 (59.6 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 46/154 (29%), Positives = 68/154 (44%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTED---ACI-E--DTEQC 54
+G + + C +YG + +G N C C C + S+ + +C+ E D +C
Sbjct: 1430 AGDFCERCALGYYG-------IVRGLPN-DCQQ-CACPLISSSNNFSPSCVLEGLDDYRC 1480
Query: 55 K-CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCK 113
C +G G C+RC GY G S +P C +C C GS+ C+ TG C C+
Sbjct: 1481 TACPRGYEGQYCERCSAGYTG----SPRSPG-GTCQECECDPQGSLPLPCDPATGLCTCR 1535
Query: 114 PGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNG 147
PG G KC+ C + + G G E C G
Sbjct: 1536 PGATGPKCDGCQPGHARQGSECVFCGDE---CTG 1566
Score = 130 (50.8 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 37/111 (33%), Positives = 49/111 (44%)
Query: 1 SGIYLKSCLDS-W-YGCCPDNKTLAQGPDNAGC-PSTCGCNKLGSTEDACIEDTEQCKCK 57
SG C W Y C + G D+ C P T C+ C++ T QC CK
Sbjct: 1072 SGAKCTECNQGHWNYPHCSPCECFLPGTDDRTCDPETKKCS--------CVDQTGQCTCK 1123
Query: 58 QGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTG 108
V G+ CDRC PG +GL A + GC +C C FG+ + C + G
Sbjct: 1124 VNVEGVHCDRCRPGNFGLD-----AKNPLGCSQCYC--FGATTQ-CSEAKG 1166
Score = 117 (46.2 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 26/77 (33%), Positives = 38/77 (49%)
Query: 52 EQCKCKQGVGGLKCDRCEPGYWGL-SKISSYA--PDIDGCLKCGCSQFGSVREDCEQMTG 108
E+C+C G GL C+ C PG++ L S+ S A P + C+ C C S+ C+ T
Sbjct: 1364 ERCECPAGHSGLSCEACGPGFYRLPSEPGSAAARPALGPCVPCQCHGHSSL---CDPETS 1420
Query: 109 RCV-CKPGVKGSKCNEC 124
+C C+ G C C
Sbjct: 1421 KCQNCQHHTAGDFCERC 1437
Score = 44 (20.5 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 135 GCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSD 174
GC+ + + G+P +N +EL G CP++
Sbjct: 3073 GCIRSLRLTKGTGKPLEVNFAKALEL---RGVQPVSCPAN 3109
Score = 44 (20.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 18/59 (30%), Positives = 24/59 (40%)
Query: 7 SCLDSWYGC-CPDNKTLAQGPDNAGC-PSTCGC---NKLGSTEDACIEDTEQCKCKQGV 60
SC+D C C N +G C P G N LG ++ C T QC +G+
Sbjct: 1112 SCVDQTGQCTCKVN---VEGVHCDRCRPGNFGLDAKNPLGCSQCYCFGATTQCSEAKGL 1167
>WB|WBGene00002247 [details] [associations]
symbol:lam-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0060465 "pharynx development" evidence=IMP]
[GO:0005604 "basement membrane" evidence=IDA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] GO:GO:0009792 GO:GO:0002119
InterPro:IPR016140 SMART:SM00499 GO:GO:0010171 GO:GO:0040011
GO:GO:0040017 GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604 GO:GO:0060465
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOGENOM:HOG000007552 GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 EMBL:FO080652 RefSeq:NP_500734.3
PaxDb:O44565 EnsemblMetazoa:W03F8.5 GeneID:177292
KEGG:cel:CELE_W03F8.5 UCSC:W03F8.5 CTD:177292 WormBase:W03F8.5
NextBio:896146 Uniprot:O44565
Length = 1790
Score = 203 (76.5 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 44/131 (33%), Positives = 64/131 (48%)
Query: 33 STCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
S C C+ GS C QC+CK V G +CD+C G +G + P GC KC
Sbjct: 777 SECNCDATGSVSGICNVQGGQCECKPNVVGRRCDQCAIGTYG------FGPS--GCKKCD 828
Query: 93 CSQFGSVREDCEQMTGRCVCKP-GVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPV 151
C GS+ DC++ +G+CVC+ G+ G +CN+C P G G P CN +
Sbjct: 829 CDAVGSLGNDCDKQSGQCVCREKGIYGRQCNQC-QP----GFWG-FPECRTCQCNDHANI 882
Query: 152 INLQTGVELDC 162
+ +G ++C
Sbjct: 883 CDQSSGACIEC 893
Score = 202 (76.2 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 54/159 (33%), Positives = 77/159 (48%)
Query: 35 CGCNKLGS-TEDACI--EDTEQ------CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
C C+K GS + C ED E+ C CK V G +CDRC+ GYW L++ + +
Sbjct: 407 CECDKAGSQNKGICEGEEDAERGLVAGKCYCKTNVDGNRCDRCKNGYWNLTETN-----V 461
Query: 86 DGCLKCGCSQFGSVR-EDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKP 144
DGC+ C C+ G+ E C++ TG C CK V G C++CL + L + + G +
Sbjct: 462 DGCVACTCNLLGTYNNEGCDKYTGMCTCKRLVTGENCDQCLPEHYGLSEH--VDGCKACD 519
Query: 145 CN--GE-PPVINLQTGVELDC--G-SGANREDCPSDAYC 177
C+ G + TG + C G SG E S YC
Sbjct: 520 CDIGGSYDNTCEITTG-QCKCREGFSGRRCETADSSFYC 557
Score = 195 (73.7 bits), Expect = 7.3e-14, P = 7.3e-14
Identities = 51/129 (39%), Positives = 63/129 (48%)
Query: 8 CLDSWYG--C--CPDNK-TLAQGPDNAGCPSTCGCNKLG---STEDA----CIEDTEQCK 55
C D+ G C C +N LA G AGC + CGC+ G + E C QC+
Sbjct: 1061 CHDNIIGMQCDQCAENHFNLASG---AGCEA-CGCDSNGVVLNHEGVPHLQCNIFDGQCQ 1116
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
CK G GG KCD+CE YWG PD GC +C C+ GS C + G C C+ G
Sbjct: 1117 CKPGRGGRKCDQCEDLYWG----DPTTPD--GCHRCECNPTGSKSLQCHRNNGTCECQAG 1170
Query: 116 VKGSKCNEC 124
G+ CNEC
Sbjct: 1171 SGGALCNEC 1179
Score = 184 (69.8 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 37/93 (39%), Positives = 50/93 (53%)
Query: 30 GCPSTCGCNKLGS-TEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
GC + C CN LG+ + C + T C CK+ V G CD+C P ++GLS+ +DGC
Sbjct: 463 GCVA-CTCNLLGTYNNEGCDKYTGMCTCKRLVTGENCDQCLPEHYGLSE------HVDGC 515
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
C C GS CE TG+C C+ G G +C
Sbjct: 516 KACDCDIGGSYDNTCEITTGQCKCREGFSGRRC 548
Score = 180 (68.4 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 56/176 (31%), Positives = 75/176 (42%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLG--STEDACIEDTEQCKCKQG 59
G + C+D +YG D K C C CN+LG ST+ AC + QC C
Sbjct: 1016 GAQCEHCVDGYYG---DAKLKT-------C-QRCVCNELGTNSTKGACDRVSGQCPCHDN 1064
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRE-------DCEQMTGRCVC 112
+ G++CD+C ++ L+ S A GC CGC G V C G+C C
Sbjct: 1065 IIGMQCDQCAENHFNLA---SGA----GCEACGCDSNGVVLNHEGVPHLQCNIFDGQCQC 1117
Query: 113 KPGVKGSKCNECLDP--NKKLGPNGCMPGMEVKPCNGEPPVINLQTGV-ELDCGSG 165
KPG G KC++C D P+GC E P + + G E GSG
Sbjct: 1118 KPGRGGRKCDQCEDLYWGDPTTPDGCHR-CECNPTGSKSLQCHRNNGTCECQAGSG 1172
Score = 158 (60.7 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 38/138 (27%), Positives = 67/138 (48%)
Query: 30 GCPSTCGCN-KLG-STEDACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
G C CN + + E +C T +C KC G +C+ C GY+G +K+ +
Sbjct: 981 GTCERCDCNGNIDMAMEGSCDAATGECLKCLHHTEGAQCEHCVDGYYGDAKLKT------ 1034
Query: 87 GCLKCGCSQFG--SVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKP 144
C +C C++ G S + C++++G+C C + G +C++C + + L +G G E
Sbjct: 1035 -CQRCVCNELGTNSTKGACDRVSGQCPCHDNIIGMQCDQCAENHFNLA-SGA--GCEACG 1090
Query: 145 CNGEPPVINLQTGVELDC 162
C+ V+N + L C
Sbjct: 1091 CDSNGVVLNHEGVPHLQC 1108
Score = 130 (50.8 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 38/137 (27%), Positives = 56/137 (40%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACI-----EDTEQ-- 53
+G Y C D +YG D + L G CP G D C +T+
Sbjct: 898 TGHYCDRCQDGYYG---DPR-LGVGIPCKPCPCPGGPTSGYQHADTCYLRNSGNNTQDIV 953
Query: 54 CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG-CLKCGCS-QFGSVRE-DCEQMTGRC 110
C CK G G +C C +WG + ++ G C +C C+ E C+ TG C
Sbjct: 954 CNCKSGYQGERCGECAQNHWGSPR------EVGGTCERCDCNGNIDMAMEGSCDAATGEC 1007
Query: 111 V-CKPGVKGSKCNECLD 126
+ C +G++C C+D
Sbjct: 1008 LKCLHHTEGAQCEHCVD 1024
>UNIPROTKB|F1MC13 [details] [associations]
symbol:LAMA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090002 "establishment of protein localization to
plasma membrane" evidence=IEA] [GO:0060445 "branching involved in
salivary gland morphogenesis" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0030324 "lung
development" evidence=IEA] [GO:0016331 "morphogenesis of embryonic
epithelium" evidence=IEA] [GO:0007517 "muscle organ development"
evidence=IEA] [GO:0007229 "integrin-mediated signaling pathway"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005178 "integrin binding" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001738 "morphogenesis of a polarized
epithelium" evidence=IEA] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0045995 "regulation
of embryonic development" evidence=IEA] [GO:0030334 "regulation of
cell migration" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0007229 GO:GO:0042475 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738
GO:GO:0034446 GO:GO:0090002 GO:GO:0016331 GO:GO:0001658
GO:GO:0060445 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:LRHTTGP GO:GO:0043259 EMBL:DAAA02036259 EMBL:DAAA02036256
EMBL:DAAA02036257 EMBL:DAAA02036258 IPI:IPI00717460
Ensembl:ENSBTAT00000003981 Uniprot:F1MC13
Length = 3656
Score = 206 (77.6 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 55/178 (30%), Positives = 79/178 (44%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
+G +SC +YG N L P N C + C C+ G+ +AC + C CK GV
Sbjct: 1960 TGPRCESCAPGFYG----NALL---PGN--C-TRCDCSPCGT--EACDPHSGHCLCKAGV 2007
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSK 120
GL+CDRC+ G++G +GC C C E C +G+C C+PG G +
Sbjct: 2008 TGLRCDRCQEGHFGFE-------GCEGCRPCACGPAAESSE-CHPQSGQCHCRPGTGGPQ 2059
Query: 121 CNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSDAYCH 178
C EC + L GC + C + +L TG C G E C + ++ H
Sbjct: 2060 CRECAPGHWGLPEQGC------RRCQCQGGHCDLHTG-RCTCPPGLGGERCETCSHQH 2110
Score = 186 (70.5 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 38/102 (37%), Positives = 50/102 (49%)
Query: 23 AQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYA 82
A G GC C C+ G + C D+ QC C+ G G CDRC PGY+ +
Sbjct: 513 APGFYGPGC-QPCQCSSPGVVDGTCDRDSGQCTCRTGFEGAACDRCAPGYF-------HF 564
Query: 83 PDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
P C CGCS G++ E C+ GRC+C+P G C+ C
Sbjct: 565 PL---CQLCGCSPVGTLPEGCDD-AGRCLCRPEFNGPHCDRC 602
Score = 184 (69.8 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 41/113 (36%), Positives = 54/113 (47%)
Query: 30 GCPSTCGCNKLGSTE--D-ACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
GC C C+ G E D C D+ QCKC+ V G +CD C PG+ G P
Sbjct: 1489 GCEE-CNCSGPGVQELMDPTCDADSGQCKCRPNVAGRRCDTCAPGFHGF-------PS-- 1538
Query: 87 GCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKL---GPNGC 136
C C C + GS C+ +TG+C CK V+G +C++C L P GC
Sbjct: 1539 -CRPCDCHEAGSAPGTCDPLTGQCYCKENVQGPRCDQCRLGTFSLDAANPKGC 1590
Score = 183 (69.5 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 40/110 (36%), Positives = 53/110 (48%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC C C + + C + QC C+ G GG +C C PG+WGL P+ GC
Sbjct: 2027 GC-RPCACGPAAESSE-CHPQSGQCHCRPGTGGPQCRECAPGHWGL-------PE-QGCR 2076
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPG 139
+C C Q G C+ TGRC C PG+ G +C C ++ P G PG
Sbjct: 2077 RCQC-QGGH----CDLHTGRCTCPPGLGGERCETCSHQHQVPVPGG--PG 2119
Score = 175 (66.7 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 40/118 (33%), Positives = 57/118 (48%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKC 65
C ++G P N P+ GC + C C+ G+ A C QC CK V G C
Sbjct: 741 CKPGFWGLSPSN------PE--GC-TRCNCDPRGTLGGAAQCQLGNGQCFCKPHVCGQTC 791
Query: 66 DRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
C+ G++GL + D GC C C G++ + CE TG C+C+P +GS C+E
Sbjct: 792 AACKDGFFGLDQA-----DYFGCRSCRCDVGGALGQSCELRTGACMCRPNTQGSTCSE 844
Score = 165 (63.1 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 31/75 (41%), Positives = 41/75 (54%)
Query: 54 CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSV--REDCEQMTGRCV 111
C C+ V G CDRC+PG+WGLS + P+ GC +C C G++ C+ G+C
Sbjct: 727 CTCRAHVEGPSCDRCKPGFWGLSPSN---PE--GCTRCNCDPRGTLGGAAQCQLGNGQCF 781
Query: 112 CKPGVKGSKCNECLD 126
CKP V G C C D
Sbjct: 782 CKPHVCGQTCAACKD 796
Score = 158 (60.7 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 38/120 (31%), Positives = 52/120 (43%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ GS + C C+C G G C C PG+ G PD C C CS
Sbjct: 615 CACDPRGSVDQLCGAGG-LCRCCSGYAGSTCQECSPGFHGF-------PD---CAPCHCS 663
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGP----NGCMPGMEVKPCNGEPP 150
GS+ C+ +G+C C+P V G +C+ C+ P P C P + P + PP
Sbjct: 664 PEGSLHAACDPHSGQCSCRPRVTGLRCDMCV-PGAYNFPYCEAGSCHPA-GLAPADRVPP 721
Score = 154 (59.3 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 50/154 (32%), Positives = 65/154 (42%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
CGC+ +G+ + C +D +C C+ G CDRC GY G Y P+ C C C
Sbjct: 570 CGCSPVGTLPEGC-DDAGRCLCRPEFNGPHCDRCRLGYHG------Y-PE---CHACACD 618
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPN----KKLGPNGCMPGMEVK----PCN 146
GSV + C G C C G GS C EC P P C P + P +
Sbjct: 619 PRGSVDQLCGA-GGLCRCCSGYAGSTCQEC-SPGFHGFPDCAPCHCSPEGSLHAACDPHS 676
Query: 147 GEPPVINLQTGVELD-CGSGA-NREDCPSDAYCH 178
G+ TG+ D C GA N C + + CH
Sbjct: 677 GQCSCRPRVTGLRCDMCVPGAYNFPYCEAGS-CH 709
Score = 145 (56.1 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 31/90 (34%), Positives = 42/90 (46%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
CGC+++G+ C QC C+ V G C RC GYWG P C C CS
Sbjct: 1403 CGCHEVGAMSPTCEPFGGQCPCRAHVIGRDCSRCATGYWGF-------PS---CRPCDCS 1452
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
G + C+++TG+C+C P C C
Sbjct: 1453 --GRL---CDELTGQCICPPRTIPPDCLVC 1477
Score = 137 (53.3 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 52/197 (26%), Positives = 78/197 (39%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
+GI + CL +Y PD+ D+ C C T+ C + T +C C+
Sbjct: 383 TGINCEQCLPGFYRS-PDHPL-----DSPHACRRCNCES-DFTDGTCEDLTGRCYCRPNF 435
Query: 61 GGLKCDRCEPGYWGLSK---ISSYAPDIDG--------CLKCGCSQFGSVREDCEQ--MT 107
G +CD C G+ + S + + G + C CS G+ C +
Sbjct: 436 TGARCDACAEGFTDFPHCYPVPSSSHNDTGEQVLPAGHIVNCDCSAAGTQGNACRKDPQV 495
Query: 108 GRCVCKPGVKGSKCNECLDPNKKLGPNGCMP------GMEVKPCNGEPPVINLQTGVELD 161
G CVCKP +G+ C C P GP GC P G+ C+ + +TG E
Sbjct: 496 GHCVCKPNFQGTHCELCA-PGF-YGP-GCQPCQCSSPGVVDGTCDRDSGQCTCRTGFE-- 550
Query: 162 CGSGANREDCPSDAYCH 178
G+ +R C + Y H
Sbjct: 551 -GAACDR--C-APGYFH 563
Score = 134 (52.2 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 53/202 (26%), Positives = 74/202 (36%)
Query: 7 SCLDSWYGCCPDNKTLAQGPDNAGCPSTC-GCNKLGSTEDACIEDTE---------QCKC 56
+C S CCP P + C CN G D C D E Q +
Sbjct: 310 TCGGSCDRCCPGFNQQPWRPATTDSANECQSCNCYGHAHD-CYYDPEVDRRNASQNQDQV 368
Query: 57 KQGVG----------GLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC-SQFGSVREDCEQ 105
QG G G+ C++C PG++ +P C +C C S F CE
Sbjct: 369 YQGGGVCIDCQHHTTGINCEQCLPGFYRSPDHPLDSPH--ACRRCNCESDFTD--GTCED 424
Query: 106 MTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGS- 164
+TGRC C+P G++C+ C + P+ C P + V+ V DC +
Sbjct: 425 LTGRCYCRPNFTGARCDACAEGFTDF-PH-CYPVPSSSHNDTGEQVLPAGHIVNCDCSAA 482
Query: 165 GANREDCPSD---AYCHITQNF 183
G C D +C NF
Sbjct: 483 GTQGNACRKDPQVGHCVCKPNF 504
Score = 133 (51.9 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 37/126 (29%), Positives = 46/126 (36%)
Query: 31 CPSTCGCNKLGSTEDACI--EDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
CP N + CI QC CK G G C+RC PG++G + C
Sbjct: 1876 CPLAVPSNNFAT---GCILRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLG-----SSC 1927
Query: 89 LKCGCSQFGSVR---EDCEQMTGRCV-CKPGVKGSKCNECLDP--NKKLGPNGCMPGMEV 142
C CS G DC+ +TG C C G +C C L P C +
Sbjct: 1928 QPCDCSGNGDPNMLFSDCDPLTGTCRGCLRHTTGPRCESCAPGFYGNALLPGNCTR-CDC 1986
Query: 143 KPCNGE 148
PC E
Sbjct: 1987 SPCGTE 1992
Score = 120 (47.3 bits), Expect = 0.00039, P = 0.00039
Identities = 30/84 (35%), Positives = 40/84 (47%)
Query: 26 PDNAGCPST--CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAP 83
P G PS C C++ GS C T QC CK+ V G +CD+C G + L A
Sbjct: 1531 PGFHGFPSCRPCDCHEAGSAPGTCDPLTGQCYCKENVQGPRCDQCRLGTFSLD-----AA 1585
Query: 84 DIDGCLKCGCSQFGSVREDCEQMT 107
+ GC +C C FG+ + C T
Sbjct: 1586 NPKGCTRCFC--FGAT-DRCRSST 1606
>RGD|1307207 [details] [associations]
symbol:Lama1 "laminin, alpha 1" species:10116 "Rattus
norvegicus" [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISO] [GO:0005604
"basement membrane" evidence=ISO] [GO:0005606 "laminin-1 complex"
evidence=IEA;ISO] [GO:0005608 "laminin-3 complex" evidence=IEA;ISO]
[GO:0005615 "extracellular space" evidence=IEA;ISO] [GO:0005911
"cell-cell junction" evidence=IEA;ISO] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0007166 "cell surface receptor signaling pathway"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0009888 "tissue development" evidence=ISO] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0031012 "extracellular matrix"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=IEA;ISO] [GO:0043208 "glycosphingolipid binding"
evidence=IEA;ISO] [GO:0043256 "laminin complex" evidence=ISO]
[GO:0045198 "establishment of epithelial cell apical/basal
polarity" evidence=IEA;ISO] [GO:0045995 "regulation of embryonic
development" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=ISO] [GO:0060441 "epithelial tube
branching involved in lung morphogenesis" evidence=IEA;ISO]
[GO:0060445 "branching involved in salivary gland morphogenesis"
evidence=IEA;ISO] [GO:0061304 "retinal blood vessel morphogenesis"
evidence=IEA;ISO] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 RGD:1307207 GO:GO:0005615 GO:GO:0030155
GO:GO:0007155 GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0031175 GO:GO:0060441 GO:GO:0060445 Pfam:PF02210
GO:GO:0045198 GO:GO:0045995 GO:GO:0005201 GO:GO:0043208
GO:GO:0002011 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 CTD:284217 KO:K05637 OrthoDB:EOG4K3KVB GO:GO:0005606
GO:GO:0005608 EMBL:AB425340 IPI:IPI00363534 RefSeq:NP_001101707.2
UniGene:Rn.2807 Ensembl:ENSRNOT00000023226 GeneID:316758
KEGG:rno:316758 UCSC:RGD:1307207 NextBio:671215 Uniprot:D4A409
Length = 3083
Score = 205 (77.2 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 47/137 (34%), Positives = 66/137 (48%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVG 61
G + + C D +YG D T C + C C++ GS C +T C CK V
Sbjct: 886 GAHCERCADGFYG---DAVTAKN------CRA-CNCHENGSLSGICHLETGLCDCKPYVT 935
Query: 62 GLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
G +CD+C PGY+GL GC+ C CS GS+ ++C + G+C C PGV G +C
Sbjct: 936 GQQCDQCLPGYYGLDTGL-------GCVPCNCSGEGSISDNCTE-EGQCHCVPGVSGKQC 987
Query: 122 NECLDPNKKLGPNGCMP 138
++C GC P
Sbjct: 988 DQCSHGFYAFQNGGCTP 1004
Score = 196 (74.1 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 36/97 (37%), Positives = 51/97 (52%)
Query: 28 NAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
N GC + C C T++ C D+ +C C GLKC++CE +WGL P+ G
Sbjct: 999 NGGC-TPCDC---AHTQNNCDPDSGECLCPPHTHGLKCEQCEEAFWGLD------PE-QG 1047
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C C CS GS C+ ++G+C CK G G C++C
Sbjct: 1048 CQACNCSVVGSTSPQCDVLSGQCSCKEGFGGQSCHQC 1084
Score = 181 (68.8 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 51/151 (33%), Positives = 70/151 (46%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDT--------- 51
+GI ++C+D +Y P ++ D P C C+ +GS CI+D
Sbjct: 376 TGINCETCIDQYYR--PHK--VSPYEDQPCRP--CDCDPVGSLSSVCIKDDLHADLANGK 429
Query: 52 --EQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGR 109
QC C++G G KCDRC+ GY G P+ C+ C CS GSV ED T
Sbjct: 430 WPGQCPCRKGYAGDKCDRCQFGYRGF-------PN---CVPCDCSTVGSVNED--PCTEP 477
Query: 110 CVCKPGVKGSKCNECLDPN----KKLGPNGC 136
C+CK V+G C+ C P K+ P GC
Sbjct: 478 CLCKKNVEGENCDRC-KPGFYNLKERNPEGC 507
Score = 179 (68.1 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 47/158 (29%), Positives = 65/158 (41%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P L G GC C C+ GS D C E+ QC C GV G +CD+C G+
Sbjct: 942 CLPGYYGLDTG---LGCVP-CNCSGEGSISDNCTEEG-QCHCVPGVSGKQCDQCSHGF-- 994
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN 134
YA GC C C+ + +C+ +G C+C P G KC +C + L P
Sbjct: 995 ------YAFQNGGCTPCDCAH---TQNNCDPDSGECLCPPHTHGLKCEQCEEAFWGLDPE 1045
Query: 135 -GCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
GC P ++ +G + C G + C
Sbjct: 1046 QGCQ-ACNCSVVGSTSPQCDVLSG-QCSCKEGFGGQSC 1081
Score = 178 (67.7 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 45/141 (31%), Positives = 64/141 (45%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ---CK-C 56
+G + + C +YG K + D C TC + S C+ + + C C
Sbjct: 1434 AGDHCELCTAGYYG-----KVIGLPGDCTPC--TCPHHPPFSFSPTCVLEGDSGFWCDAC 1486
Query: 57 KQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGV 116
G G C+RC GY G + + C KC C+ GSV DC++ +G+CVCKPG
Sbjct: 1487 LPGYEGQYCERCSAGYHGNPRAAG-----GSCQKCDCNPQGSVHSDCDRASGQCVCKPGA 1541
Query: 117 KGSKCNECLDPNKKLGPNGCM 137
G C ECL P L + C+
Sbjct: 1542 TGLHCEECL-PRHILMESHCV 1561
Score = 163 (62.4 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 44/149 (29%), Positives = 68/149 (45%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVG 61
G+ + C ++++G P+ GC + C C+ +GST C + QC CK+G G
Sbjct: 1029 GLKCEQCEEAFWGLDPEQ----------GCQA-CNCSVVGSTSPQCDVLSGQCSCKEGFG 1077
Query: 62 GLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCE---------QMTGRCVC 112
G C +C GY S+ PD C+ C C G++ + C+ + +G C C
Sbjct: 1078 GQSCHQCSLGY------RSF-PD---CVPCDCDLRGTLADTCDLEQGLCSCTEDSGTCSC 1127
Query: 113 KPGVKGSKCNECLDPNKKL---GPNGCMP 138
K V G +C++C L P GC P
Sbjct: 1128 KENVLGPQCDKCRAGTFALRADNPLGCSP 1156
Score = 154 (59.3 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 44/127 (34%), Positives = 61/127 (48%)
Query: 12 WYGCCPDNKTLAQGP-DNA-----GCPST--CGCNKLGST-EDACIEDTEQCKCKQGVGG 62
W G CP K A D G P+ C C+ +GS ED C TE C CK+ V G
Sbjct: 430 WPGQCPCRKGYAGDKCDRCQFGYRGFPNCVPCDCSTVGSVNEDPC---TEPCLCKKNVEG 486
Query: 63 LKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN 122
CDRC+PG++ L + + P+ GC +C C FG V + C+ +T + G
Sbjct: 487 ENCDRCKPGFYNLKERN---PE--GCSECFC--FG-VSDVCDSLTWSVSQVTNMSGWLVT 538
Query: 123 ECLDPNK 129
+ + PNK
Sbjct: 539 DLISPNK 545
Score = 135 (52.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 52/186 (27%), Positives = 74/186 (39%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDAC-IEDTEQCKCKQ- 58
+G + + CL +YG P T A CP + N T C + D E+ C Q
Sbjct: 772 TGDHCEQCLPGFYGT-PSRGTPGDCQPCA-CPLSIDSNNFSPT---CHLTDREEVVCDQC 826
Query: 59 --GVGGLKCDRCEPGYWGLSKISSYAPDIDG--CLKCGCSQFGSVRE--DCEQMTGRCV- 111
G G C+RC GY+G P + G C+ C CS E C+ +TG C+
Sbjct: 827 APGYSGAWCERCADGYYG-------NPTVPGGTCVPCNCSGNVDPLEAGHCDSVTGECLK 879
Query: 112 CKPGVKGSKCNECLDPNKKLGPNG-CMPGMEVKPCN----GE-PPVINLQTGVELDCGSG 165
C G+ C C D G G + + CN G + +L+TG+ DC
Sbjct: 880 CLWNTDGAHCERCAD-----GFYGDAVTAKNCRACNCHENGSLSGICHLETGL-CDCKPY 933
Query: 166 ANREDC 171
+ C
Sbjct: 934 VTGQQC 939
Score = 118 (46.6 bits), Expect = 0.00059, P = 0.00059
Identities = 43/137 (31%), Positives = 54/137 (39%)
Query: 52 EQCKCKQGVGGLKCDRCEPGYW-G-LSKISSYAPD--IDGCLKCGCSQFGSVREDCEQMT 107
E C C G G C C PGY G L + S P + C+ C C+ V C+ T
Sbjct: 1367 ELCVCPPGTAGHSCQDCAPGYHRGKLPESSGRGPRPLLAPCVPCNCNNHSDV---CDPET 1423
Query: 108 GRCV-CKPGVKGSKCNECLDP--NKKLG-PNGCMPGMEVKPCNGEPPVINLQTGVELDCG 163
G+C+ C+ G C C K +G P C P C PP T V L+
Sbjct: 1424 GKCLNCRDHTAGDHCELCTAGYYGKVIGLPGDCTPCT----CPHHPPFSFSPTCV-LEGD 1478
Query: 164 SGANREDC-PS--DAYC 177
SG + C P YC
Sbjct: 1479 SGFWCDACLPGYEGQYC 1495
>UNIPROTKB|E1BXK1 [details] [associations]
symbol:LAMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005610 "laminin-5 complex" evidence=IEA] [GO:0008201
"heparin binding" evidence=IEA] GO:GO:0008201 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052 SMART:SM00281
PROSITE:PS51115 GeneTree:ENSGT00690000102103 GO:GO:0005610
OMA:DRCLPCN EMBL:AADN02034184 EMBL:AADN02034183 IPI:IPI00588334
Ensembl:ENSGALT00000007372 ArrayExpress:E1BXK1 Uniprot:E1BXK1
Length = 1175
Score = 199 (75.1 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 48/144 (33%), Positives = 65/144 (45%)
Query: 1 SGIYLKSCLDSWYGC-CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQG 59
+G CL + G C K + C C C+ GS C + +C C+ G
Sbjct: 47 NGYRCLGCLGNTAGAHCERCKEGYYRQQDGDCCLPCRCHPQGSLSTQC-DSNGRCSCRPG 105
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPDIDGCLK--CGCSQFGSVREDCEQMTGRCVCKPGVK 117
V G KCDRC+PG+ LS+ + P C C C G+ DC ++GRC+CK GV
Sbjct: 106 VMGEKCDRCQPGFHSLSE-AGCCPHCPRCRSQLCACDPAGT--GDC--VSGRCICKVGVT 160
Query: 118 GSKCNECLDPNKKL---GPNGCMP 138
G +C+ C L P GC P
Sbjct: 161 GERCDRCKQNFYNLDARNPAGCSP 184
Score = 142 (55.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 32/97 (32%), Positives = 44/97 (45%)
Query: 32 PSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPD-IDGCL 89
P C N + C T +C KC G C+RC+ G++G + AP+ D C
Sbjct: 509 PCQCNSNVEPNAVGNCDRRTGECLKCIYNTAGFHCERCKDGFFG----NPLAPNPADKCR 564
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC--NEC 124
C C+ G+ C G C+CKPG G C +EC
Sbjct: 565 ACNCNSVGAEPLMCRN-DGSCICKPGFGGPNCEQSEC 600
>UNIPROTKB|E1BP05 [details] [associations]
symbol:USH2A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060171 "stereocilium membrane" evidence=IEA]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IEA]
[GO:0048496 "maintenance of organ identity" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0035315 "hair cell differentiation" evidence=IEA] [GO:0017022
"myosin binding" evidence=IEA] [GO:0016324 "apical plasma membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005518 "collagen binding"
evidence=IEA] [GO:0002142 "stereocilia ankle link complex"
evidence=IEA] InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853
SMART:SM00060 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0045494 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007605
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0005604 GO:GO:0060113 Pfam:PF02210 GO:GO:0032421
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0002142 GO:GO:0048496 GeneTree:ENSGT00700000104042
InterPro:IPR006558 SMART:SM00560 OMA:EIRIQAC InterPro:IPR026915
PANTHER:PTHR10574:SF53 EMBL:DAAA02042466 EMBL:DAAA02042467
EMBL:DAAA02042468 EMBL:DAAA02042469 EMBL:DAAA02042470
EMBL:DAAA02042471 EMBL:DAAA02042472 EMBL:DAAA02042473
EMBL:DAAA02042474 EMBL:DAAA02042475 EMBL:DAAA02042476
EMBL:DAAA02042477 EMBL:DAAA02042478 EMBL:DAAA02042479
EMBL:DAAA02042480 EMBL:DAAA02042481 EMBL:DAAA02042482
EMBL:DAAA02042483 IPI:IPI00924139 Ensembl:ENSBTAT00000061112
Uniprot:E1BP05
Length = 5204
Score = 205 (77.2 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 52/166 (31%), Positives = 72/166 (43%)
Query: 27 DNAGCPSTCGCNKLGSTED--ACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
D GC S C CN G+ + C ++ QCKCK V GL+CD C G+ L +
Sbjct: 687 DPDGC-SPCNCNTSGTVDGDITCHPNSGQCKCKANVIGLRCDHCNFGFKFLQSFND---- 741
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKP 144
DGC C C+ GSV C ++G+C CK KG +C+ C + L GC +
Sbjct: 742 -DGCEPCQCNLHGSVNRLCNPLSGQCECKKEAKGLQCDTCREHFYGLDATGCK-ACDCDV 799
Query: 145 CNGEP-PVINLQTGVELDCGSGANREDCPS--DAYCHITQNFARCC 187
P V + TG + C C + Y + QN + C
Sbjct: 800 AGSRPGTVCDAWTG-QCVCKPNVGGRRCSECVEGYFYQPQNRSFLC 844
Score = 190 (71.9 bits), Expect = 8.0e-13, P = 8.0e-13
Identities = 58/185 (31%), Positives = 76/185 (41%)
Query: 25 GPDNAGCPSTCGCNKLGSTEDA-CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAP 83
G D GC + C C+ GS C T QC CK VGG +C C GY+ + S+
Sbjct: 786 GLDATGCKA-CDCDVAGSRPGTVCDAWTGQCVCKPNVGGRRCSECVEGYFYQPQNRSFL- 843
Query: 84 DIDGCLKCGCSQFGSVRED--CEQMTGRCVCKPGVKGSKCNECLDPNKKL--G------- 132
CL C C + G+V C++ TG+C CK GV G CN+C L G
Sbjct: 844 ----CLPCNCDRTGTVNGSLLCDKSTGQCPCKLGVTGLHCNQCESHRYHLTVGSFQGCQM 899
Query: 133 ----PNGCMPGMEVKPCNGEPPVINLQTGVELD-CGSG-----ANREDCPSDAYCHITQN 182
P G +PG P +G+ P + + G + C G N C CH T
Sbjct: 900 CECDPLGTLPGTICDPLSGQCPCLPNRQGRRCNQCQPGFYISPGNATGC-LPCSCHTTGA 958
Query: 183 FARCC 187
C
Sbjct: 959 VNHIC 963
Score = 182 (69.1 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 43/127 (33%), Positives = 58/127 (45%)
Query: 26 PDNA-GCPSTCGCNKLGSTEDACIEDTEQCKCKQG-VGGLKCDRCEPGYWGLSKISSYAP 83
P NA GC C C+ G+ C T QC C+ + G CD C+ Y+G ++
Sbjct: 942 PGNATGC-LPCSCHTTGAVNHICNSLTGQCVCQDASIAGQSCDYCKDLYFGFDSLTGR-- 998
Query: 84 DIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKK----LGPNGCM-- 137
C C C G++ E C +TG+C CK V GSKC+ C+ PN P GC
Sbjct: 999 ----CQPCNCHLSGALNETCHLVTGQCFCKRFVTGSKCDTCV-PNASHLDISNPLGCSKT 1053
Query: 138 PGMEVKP 144
P + P
Sbjct: 1054 PSQQPPP 1060
Score = 174 (66.3 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 38/111 (34%), Positives = 58/111 (52%)
Query: 35 CGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
C C+K+G+ + C + QC CK+ V G +C++C+ G++ L + D DGC C
Sbjct: 641 CDCDKVGTRNSSFLCDQIGGQCNCKRHVSGRQCNQCQNGFYNLQEW-----DPDGCSPCN 695
Query: 93 CSQFGSVRED--CEQMTGRCVCKPGVKGSKCNECLDPNKKL---GPNGCMP 138
C+ G+V D C +G+C CK V G +C+ C K L +GC P
Sbjct: 696 CNTSGTVDGDITCHPNSGQCKCKANVIGLRCDHCNFGFKFLQSFNDDGCEP 746
Score = 127 (49.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 26/88 (29%), Positives = 43/88 (48%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED--CEQMTGRCVCK 113
C+ G C+ C+ ++ ++ + ID C C C + G+ C+Q+ G+C CK
Sbjct: 608 CEHNTAGKNCELCKDYFF--RQVGADPSAIDVCRPCDCDKVGTRNSSFLCDQIGGQCNCK 665
Query: 114 PGVKGSKCNECLDPNKKL---GPNGCMP 138
V G +CN+C + L P+GC P
Sbjct: 666 RHVSGRQCNQCQNGFYNLQEWDPDGCSP 693
Score = 38 (18.4 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 140 MEVKPCNGEPPVINLQTGVE 159
ME P N +PP + + TG E
Sbjct: 4442 MEAPPQNMDPPKLQV-TGSE 4460
>UNIPROTKB|E2R4J1 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0072274 "metanephric glomerular basement
membrane development" evidence=IEA] [GO:0072249 "metanephric
glomerular visceral epithelial cell development" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IEA]
[GO:0048677 "axon extension involved in regeneration" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0014044 "Schwann cell
development" evidence=IEA] [GO:0014002 "astrocyte development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007528 "neuromuscular junction development" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0005608 "laminin-3
complex" evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249
EMBL:AAEX03012231 ProteinModelPortal:E2R4J1
Ensembl:ENSCAFT00000018765 Uniprot:E2R4J1
Length = 1803
Score = 200 (75.5 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 44/137 (32%), Positives = 61/137 (44%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ GS C QC CK V G +CD C PG++G + P GC C CS
Sbjct: 786 CQCDPQGSLSSECNPHGGQCVCKPAVVGRRCDHCAPGFYG------FGPT--GCQACQCS 837
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINL 154
G++ CE+ +G+C C+ G G +C+ C + G C P + CNG +
Sbjct: 838 PEGALSGLCEETSGQCPCRTGAFGLRCDRC--QRGQWGFPSCQPCV----CNGHADECDT 891
Query: 155 QTGVELDCGSGANREDC 171
TG + C E C
Sbjct: 892 HTGACVGCRDHTGGEHC 908
Score = 180 (68.4 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 37/110 (33%), Positives = 49/110 (44%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P+ L G GC C C+ + C E T QC C+ G GG C C+ +WG
Sbjct: 1082 CAPNFWNLTSGH---GC-QPCTCHPSRARGPTCNEFTGQCHCRAGFGGRTCSECQELHWG 1137
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
P + C C C G C + TG C C+PGV G +C++C
Sbjct: 1138 -------DPGLQ-CRACDCDPHGIDTPQCHRSTGHCSCRPGVSGVRCDQC 1179
Score = 171 (65.3 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 45/125 (36%), Positives = 62/125 (49%)
Query: 27 DNAGCPSTCGCNKLGSTEDA-CI--ED------TEQCKCKQGVGGLKCDRCEPGYWGLSK 77
D A C S C C+ +GS + C +D + QC+CK+ V G +C +C G++GLS
Sbjct: 406 DPAMCRS-CDCDPMGSQDGGRCDPHDDPALGLVSGQCRCKEHVVGSRCQQCRDGFFGLS- 463
Query: 78 ISSYAPDIDGCLKCGCSQFGSV--REDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN- 134
A D GC +C C G+V C+ +G C CK V G CN CL + L +
Sbjct: 464 ----ASDPAGCRRCQCDARGTVPGTTSCDPNSGTCFCKRLVTGRGCNHCLPGHWGLSHDL 519
Query: 135 -GCMP 138
GC P
Sbjct: 520 LGCRP 524
Score = 170 (64.9 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 36/110 (32%), Positives = 53/110 (48%)
Query: 16 CPDNKTLAQGPDNAGCPSTCGCNKLGSTED--ACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C D D AGC C C+ G+ +C ++ C CK+ V G C+ C PG+W
Sbjct: 455 CRDGFFGLSASDPAGC-RRCQCDARGTVPGTTSCDPNSGTCFCKRLVTGRGCNHCLPGHW 513
Query: 74 GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
GLS D+ GC C C G++ C + TG+C C+ + G +C +
Sbjct: 514 GLSH------DLLGCRPCDCDVGGALDPQCSEATGQCRCRQHMVGRRCEQ 557
Score = 168 (64.2 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 46/152 (30%), Positives = 64/152 (42%)
Query: 25 GPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
G D CPS CN C + QC C V G CDRC P +W L+ S +
Sbjct: 1047 GTDPQQCPSIDRCN--------CDPSSGQCPCLPNVQGPTCDRCAPNFWNLT--SGH--- 1093
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKP 144
GC C C + C + TG+C C+ G G C+EC + + G PG++ +
Sbjct: 1094 --GCQPCTCHPSRARGPTCNEFTGQCHCRAGFGGRTCSECQELH--WGD----PGLQCRA 1145
Query: 145 CNGEP-----PVINLQTGVELDCGSGANREDC 171
C+ +P P + TG C G + C
Sbjct: 1146 CDCDPHGIDTPQCHRSTG-HCSCRPGVSGVRC 1176
Score = 162 (62.1 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 41/120 (34%), Positives = 54/120 (45%)
Query: 25 GPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
GP GC + C C+ G+ C E + QC C+ G GL+CDRC+ G WG P
Sbjct: 827 GP--TGCQA-CQCSPEGALSGLCEETSGQCPCRTGAFGLRCDRCQRGQWGF-------PS 876
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNECL-----DPNKKLGPNGCMP 138
C C C+ G ++C+ TG CV C+ G C C+ DP G C P
Sbjct: 877 ---CQPCVCN--GHA-DECDTHTGACVGCRDHTGGEHCERCIAGFHGDPRLPYGGQ-CRP 929
Score = 162 (62.1 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 49/168 (29%), Positives = 67/168 (39%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGYW 73
C P + PD P C N DAC T QC +C G C C+PG++
Sbjct: 971 CAPGHFGDPSRPDGQCQPCECNGNIDPMDPDACDPRTGQCLRCLYHTEGPHCAHCKPGFY 1030
Query: 74 GLSKISSYAPDIDGCLKCGCSQFG-------SV-REDCEQMTGRCVCKPGVKGSKCNECL 125
G + S C +C C+ G S+ R +C+ +G+C C P V+G C+ C
Sbjct: 1031 GQAARQS-------CHRCTCNLLGTDPQQCPSIDRCNCDPSSGQCPCLPNVQGPTCDRCA 1083
Query: 126 DPN--KKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
PN +GC P P P N TG + C +G C
Sbjct: 1084 -PNFWNLTSGHGCQP-CTCHPSRARGPTCNEFTG-QCHCRAGFGGRTC 1128
Score = 131 (51.2 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 34/106 (32%), Positives = 48/106 (45%)
Query: 63 LKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN 122
L + C P LS + Y+ G L C C GS+ +C G+CVCKP V G +C+
Sbjct: 763 LPSEACAPLLISLSTLL-YS----GALPCQCDPQGSLSSECNPHGGQCVCKPAVVGRRCD 817
Query: 123 ECLDPNKKLGPNGCMPGMEVKPCNGEPPVINL--QTGVELDCGSGA 166
C GP GC + C+ E + L +T + C +GA
Sbjct: 818 HCAPGFYGFGPTGC----QACQCSPEGALSGLCEETSGQCPCRTGA 859
Score = 116 (45.9 bits), Expect = 0.00058, P = 0.00058
Identities = 35/130 (26%), Positives = 55/130 (42%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIED--TEQ--CKCK 57
G + + C+ ++G + L G CP G +C D ++Q C C+
Sbjct: 905 GEHCERCIAGFHG----DPRLPYGGQCRPCPCPEGPGSQRHFATSCHRDGYSQQIMCHCR 960
Query: 58 QGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS-QFGSVRED-CEQMTGRCV-CKP 114
G GL+C+ C PG++G PD C C C+ + D C+ TG+C+ C
Sbjct: 961 AGYTGLRCEACAPGHFG----DPSRPD-GQCQPCECNGNIDPMDPDACDPRTGQCLRCLY 1015
Query: 115 GVKGSKCNEC 124
+G C C
Sbjct: 1016 HTEGPHCAHC 1025
Score = 109 (43.4 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C P + L+ D GC C C+ G+ + C E T QC+C+Q + G +C++ +PGY+
Sbjct: 508 CLPGHWGLSH--DLLGC-RPCDCDVGGALDPQCSEATGQCRCRQHMVGRRCEQVQPGYF 563
>WB|WBGene00016913 [details] [associations]
symbol:lam-2 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] GO:GO:0008340 GO:GO:0009792 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0040017 GO:GO:0000003
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 EMBL:FO080795
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 PIR:T28811 RefSeq:NP_509204.3
IntAct:Q18823 MINT:MINT-118164 STRING:Q18823 PaxDb:Q18823
EnsemblMetazoa:C54D1.5.1 EnsemblMetazoa:C54D1.5.2 GeneID:180980
KEGG:cel:CELE_C54D1.5 UCSC:C54D1.5 CTD:180980 WormBase:C54D1.5
eggNOG:NOG235720 GeneTree:ENSGT00690000102103 HOGENOM:HOG000019301
InParanoid:Q18823 OMA:DRCKENK NextBio:911826 Uniprot:Q18823
Length = 1633
Score = 199 (75.1 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 52/166 (31%), Positives = 74/166 (44%)
Query: 31 CPSTCGCNKLGS---TED----ACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAP 83
C S CGC G+ D C + QC C V G++CD+C G++ ++ S
Sbjct: 887 CQS-CGCFAAGTRRPNNDYTLLECNQQDGQCDCLPNVIGIQCDQCAHGFYNIT--SGL-- 941
Query: 84 DIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVK 143
GC +C C GS C+ TG+C CKPGV G +C+ C D + NGC P + +
Sbjct: 942 ---GCQECNCDPLGSEGNTCDVNTGQCQCKPGVTGQRCDRCADYHFGFSANGCQP-CDCE 997
Query: 144 PCNGEPPVINLQTGVELDCGS---GANREDCPSDAYCHITQNFARC 186
E ++ +G L C G + C + Y ITQ C
Sbjct: 998 YIGSENQQCDVNSGQCL-CKENVEGRRCDQCAENRY-GITQGCLPC 1041
Score = 187 (70.9 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 44/129 (34%), Positives = 60/129 (46%)
Query: 35 CGCNKLGSTEDACIEDTE-QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
CGCN++GS C D E +C+CK GV G CD+C G++ S +GC CGC
Sbjct: 403 CGCNEIGSLSTQC--DNEGKCQCKPGVTGRFCDQCLDGFYDFST--------NGCKNCGC 452
Query: 94 SQFGSVRED--CEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN---GCMPGMEVKPCNGE 148
GS+ C+ +G C CK V+G +C++C L GC P C G
Sbjct: 453 ETSGSLNNQPRCDSSSGSCSCKLNVEGRQCDKCKPGYFDLSTENQFGCTPCF----CFGH 508
Query: 149 PPVINLQTG 157
+ N G
Sbjct: 509 SSICNTADG 517
Score = 168 (64.2 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 49/180 (27%), Positives = 70/180 (38%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCK-CKQGVGGLKCD 66
C D ++G D + C N +G+ C + T +CK C G C+
Sbjct: 818 CSDGYFGNPKDGTECVE----CACSGNTDPNSIGN----CDKITGECKKCIFNTHGFNCE 869
Query: 67 RCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRE-------DCEQMTGRCVCKPGVKGS 119
C+PGYWG + I P C CGC G+ R +C Q G+C C P V G
Sbjct: 870 NCKPGYWGDALIE---PK-GNCQSCGCFAAGTRRPNNDYTLLECNQQDGQCDCLPNVIGI 925
Query: 120 KCNECLDPNKKLGPN-GCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSDAYCH 178
+C++C + GC P E ++ TG + C G + C A H
Sbjct: 926 QCDQCAHGFYNITSGLGCQE-CNCDPLGSEGNTCDVNTG-QCQCKPGVTGQRCDRCADYH 983
Score = 164 (62.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 38/124 (30%), Positives = 58/124 (46%)
Query: 35 CGCNKLGST---EDACIEDTEQ---C-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
C C++L + + E+T C C+ G+ C++C +W P +
Sbjct: 347 CNCSQLSNRCYFDQQLFEETGHGGHCIDCQGNTQGVHCEQCIANHWR-------RPGENY 399
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP-GMEVK-PC 145
C+ CGC++ GS+ C+ G+C CKPGV G C++CLD NGC G E
Sbjct: 400 CVACGCNEIGSLSTQCDN-EGKCQCKPGVTGRFCDQCLDGFYDFSTNGCKNCGCETSGSL 458
Query: 146 NGEP 149
N +P
Sbjct: 459 NNQP 462
Score = 131 (51.2 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 33/129 (25%), Positives = 50/129 (38%)
Query: 52 EQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV 111
E C+C G G C+ CE G+ + + + + C+KC C + CE +G C+
Sbjct: 700 EHCECLPGFVGQFCESCESGF---RRETKFGGPFNHCIKCDCHNHSN---SCEAESGSCI 753
Query: 112 CKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTG--VELDCGSGANRE 169
C+ G C C G + PC + P I G + +C +G
Sbjct: 754 CEHNTAGDTCERCARGYYGDALQGTEEDCQKCPCPNDGPCILHADGDVICTECPNGYTGR 813
Query: 170 DCP--SDAY 176
C SD Y
Sbjct: 814 RCDECSDGY 822
Score = 130 (50.8 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 34/101 (33%), Positives = 47/101 (46%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGS--TEDACIEDTEQCKCKQ 58
+G + CLD +Y D T N GC + CGC GS + C + C CK
Sbjct: 428 TGRFCDQCLDGFY----DFST------N-GCKN-CGCETSGSLNNQPRCDSSSGSCSCKL 475
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSV 99
V G +CD+C+PGY+ LS + + GC C C S+
Sbjct: 476 NVEGRQCDKCKPGYFDLSTENQF-----GCTPCFCFGHSSI 511
>UNIPROTKB|F1MEG3 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0061304 "retinal blood vessel morphogenesis"
evidence=IEA] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IEA] [GO:0060441 "epithelial tube branching
involved in lung morphogenesis" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0043208 "glycosphingolipid binding" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0005911 "cell-cell junction" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0005615
GO:GO:0030155 GO:GO:0007155 GO:GO:0005911 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0007166 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031175 GO:GO:0060441
GO:GO:0060445 GO:GO:0045198 GO:GO:0045995 GO:GO:0005201
GO:GO:0043208 GO:GO:0002011 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0061304 OMA:EPFYWRL
GO:GO:0005606 GO:GO:0005608 EMBL:DAAA02056788 EMBL:DAAA02056789
EMBL:DAAA02056790 EMBL:DAAA02056791 EMBL:DAAA02056792
IPI:IPI01000434 Ensembl:ENSBTAT00000024169 Uniprot:F1MEG3
Length = 3031
Score = 201 (75.8 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 60/189 (31%), Positives = 80/189 (42%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVG 61
G + + C D +YG D T C + C C+ GS C +T C+CK V
Sbjct: 834 GPHCERCADGFYG---DAVTAKN------CRA-CECHGQGSLSAVCHPETGLCECKPHVT 883
Query: 62 GLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
G +CD+C GY+GL GCL C CS GS+ +DC G C+C PGV G KC
Sbjct: 884 GQRCDQCLYGYYGLETGL-------GCLPCNCSA-GSLSDDCTP-EGHCLCVPGVAGEKC 934
Query: 122 NECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGS---GANREDCPSDAYCH 178
+ C GC P C + +TG E C GA E+C + H
Sbjct: 935 DRCARGFYSYQDGGCTPC----DCAHTQNTCDPETG-ECVCPPHTRGAACEECADGHWGH 989
Query: 179 ITQNFARCC 187
+ + C
Sbjct: 990 DLELGCQAC 998
Score = 188 (71.2 bits), Expect = 7.4e-13, P = 7.4e-13
Identities = 40/112 (35%), Positives = 50/112 (44%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC + C C+ +G+ C T C+CK GG C++C PGY G + D G L
Sbjct: 994 GCQA-CNCSSVGAASQRCDVVTGHCRCKPAFGGRTCEQCSPGYKGFPDCMACDCDPRGTL 1052
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPN---KKLGPNGCMP 138
C Q + C Q TG C CK V G +C EC K P GC P
Sbjct: 1053 ADTCDQEQGLCS-CAQETGACSCKENVAGPQCGECRAGTFALDKADPRGCTP 1103
Score = 183 (69.5 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 42/141 (29%), Positives = 67/141 (47%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE---QCK-C 56
+G + +C +YG K D + C TC + S CI + + +C C
Sbjct: 1381 TGDHCDTCAPGYYG-----KVTGSASDCSPC--TCPHSLPASYSPTCILEGDHDFRCDAC 1433
Query: 57 KQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGV 116
G G C+RC GY+G ++ C +C CS GSV DC++ +G+C+C+PG
Sbjct: 1434 FVGYEGQYCERCSSGYYGNPRMPGST-----CQRCDCSPHGSVHSDCDRGSGQCICRPGA 1488
Query: 117 KGSKCNECLDPNKKLGPNGCM 137
G +C +C +P L + C+
Sbjct: 1489 TGLRCGDC-EPRHILVESDCV 1508
Score = 159 (61.0 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 44/146 (30%), Positives = 62/146 (42%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQGV 60
G + + C D +YG N T+ G C C N +C T +C +C
Sbjct: 780 GDWCERCADGYYG----NPTVP-GDSCVAC--NCSGNVDLLEPGSCDSVTGECLRCLGNT 832
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSK 120
G C+RC G++G +++ C C C GS+ C TG C CKP V G +
Sbjct: 833 DGPHCERCADGFYG-DAVTA-----KNCRACECHGQGSLSAVCHPETGLCECKPHVTGQR 886
Query: 121 CNECLDPNKKLGPNGCMPGMEVKPCN 146
C++CL G G G+ PCN
Sbjct: 887 CDQCL-----YGYYGLETGLGCLPCN 907
Score = 138 (53.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 51/178 (28%), Positives = 70/178 (39%)
Query: 1 SGIYLKSCLDSWY-GCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQ 58
+G+ + C ++ G P+ P A C C CN + D C +T +C C
Sbjct: 1323 AGLSCQDCAPGYHRGKLPEGDGRRPRPLLAPCVP-CNCN---NHSDTCDPETGKCLNCGH 1378
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTG----RC-VCK 113
G CD C PGY+G K++ A D C C S S C + G RC C
Sbjct: 1379 NTTGDHCDTCAPGYYG--KVTGSASDCSPCT-CPHSLPASYSPTCI-LEGDHDFRCDACF 1434
Query: 114 PGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
G +G C C + G N MPG + C+ P V DC G+ + C
Sbjct: 1435 VGYEGQYCERC--SSGYYG-NPRMPGSTCQRCDCSP-----HGSVHSDCDRGSGQCIC 1484
Score = 136 (52.9 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 39/133 (29%), Positives = 56/133 (42%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDAC-IEDTEQCKCKQ- 58
+G + + CL +YG P T A CP + N T C ++D ++ C Q
Sbjct: 720 TGEHCERCLPGFYGL-PSRGTPGDCQPCA-CPLSTASNNFSPT---CHLDDGDEVVCDQC 774
Query: 59 --GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRE--DCEQMTGRCV-CK 113
G G C+RC GY+G + D C+ C CS + E C+ +TG C+ C
Sbjct: 775 APGYMGDWCERCADGYYGNPTVPG-----DSCVACNCSGNVDLLEPGSCDSVTGECLRCL 829
Query: 114 PGVKGSKCNECLD 126
G C C D
Sbjct: 830 GNTDGPHCERCAD 842
Score = 120 (47.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 38/123 (30%), Positives = 51/123 (41%)
Query: 50 DTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG-CLKCGCSQFGSVREDCEQMTG 108
+ E C+C QG G+ C+ C PGY+ + I G C C C G E C+ + G
Sbjct: 660 EVEHCECPQGYAGISCESCLPGYYRVDGIL-----FGGICQPCECH--GHAAE-CD-VHG 710
Query: 109 RC-VCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPC--------NGEPPVINLQTGVE 159
C C+ G C CL L G PG + +PC N P +L G E
Sbjct: 711 VCFACQHNTTGEHCERCLPGFYGLPSRGT-PG-DCQPCACPLSTASNNFSPTCHLDDGDE 768
Query: 160 LDC 162
+ C
Sbjct: 769 VVC 771
Score = 108 (43.1 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 34/115 (29%), Positives = 55/115 (47%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQG-- 59
G+ ++C+D +Y P ++ D+ P C C+ +GS CI+D +G
Sbjct: 371 GVNCETCVDGYYR--PHG--VSPYEDHPCRP--CDCDPVGSLNSVCIKDDLHSDLHRGTC 424
Query: 60 -------VGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMT 107
V G CDRC+PG++ L + + P GC +C C FG V + CE ++
Sbjct: 425 FISVLENVEGSHCDRCKPGFYNLEEKN---PQ--GCSECFC--FG-VSDVCESLS 471
Score = 83 (34.3 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 26/90 (28%), Positives = 38/90 (42%)
Query: 109 RCVCKPGVKGSKCNECLDPNKKLG--P--NGCMPGMEVKPC-----NGEPPVINLQTGVE 159
+CVC PG G C +C P G P +G P + PC N + +TG
Sbjct: 1315 KCVCPPGTAGLSCQDCA-PGYHRGKLPEGDGRRPRPLLAPCVPCNCNNHSDTCDPETGKC 1373
Query: 160 LDCGSGANREDCPSDA---YCHITQNFARC 186
L+CG + C + A Y +T + + C
Sbjct: 1374 LNCGHNTTGDHCDTCAPGYYGKVTGSASDC 1403
Score = 45 (20.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 13/47 (27%), Positives = 17/47 (36%)
Query: 7 SCLDSWYGCCPDNKTLAQGPDNAGCPSTCG-CNKLGSTEDACIEDTE 52
+C D CCP P +TC CN +D C D +
Sbjct: 297 TCGDRCNRCCPGYHQQPWRPGTVSSGNTCEECNCHNKAKD-CYYDED 342
>FB|FBgn0002526 [details] [associations]
symbol:LanA "Laminin A" species:7227 "Drosophila
melanogaster" [GO:0005604 "basement membrane" evidence=ISS;NAS;IDA]
[GO:0007417 "central nervous system development" evidence=NAS]
[GO:0007422 "peripheral nervous system development" evidence=NAS]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0035001 "dorsal trunk
growth, open tracheal system" evidence=IMP] [GO:0007507 "heart
development" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=NAS] [GO:0009888 "tissue development" evidence=NAS]
[GO:0048598 "embryonic morphogenesis" evidence=NAS] [GO:0016321
"female meiosis chromosome segregation" evidence=IMP] [GO:0007498
"mesoderm development" evidence=IEP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0001964 "startle
response" evidence=IMP] [GO:0031987 "locomotion involved in
locomotory behavior" evidence=IMP] [GO:0048854 "brain
morphogenesis" evidence=IMP] [GO:0002121 "inter-male aggressive
behavior" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0035011 "melanotic encapsulation
of foreign target" evidence=IMP] [GO:0036062 "presynaptic
periactive zone" evidence=IDA] [GO:0045886 "negative regulation of
synaptic growth at neuromuscular junction" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0007411 GO:GO:0007507 EMBL:AE014296 GO:GO:0030155
GO:GO:0007498 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605 GO:GO:0002121
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007476 GO:GO:0016321 GO:GO:0048854
Pfam:PF02210 GO:GO:0031987 GO:GO:0001964 GO:GO:0045995
GO:GO:0035011 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0035001 GO:GO:0005606 KO:K06240 EMBL:M96388 EMBL:L07288
EMBL:M75882 PIR:S28399 RefSeq:NP_476617.1 UniGene:Dm.865
ProteinModelPortal:Q00174 SMR:Q00174 MINT:MINT-754541 STRING:Q00174
PaxDb:Q00174 PRIDE:Q00174 GeneID:38723 KEGG:dme:Dmel_CG10236
CTD:38723 FlyBase:FBgn0002526 InParanoid:Q00174 OrthoDB:EOG4KKWHR
ChiTaRS:LanA GenomeRNAi:38723 NextBio:810058 Bgee:Q00174
GermOnline:CG10236 Uniprot:Q00174
Length = 3712
Score = 192 (72.6 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 46/138 (33%), Positives = 68/138 (49%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
+G Y K C + +YG P+ C + C CNK+GS + C T +CKC
Sbjct: 475 AGAYCKQCAEGYYGF----------PE---CKA-CECNKIGSITNDCNVTTGECKCLTNF 520
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSK 120
GG C+RC+ GY+ +Y P C C C G+ E C + +G+C+C+ G G +
Sbjct: 521 GGDNCERCKHGYF------NY-PT---CSYCDCDNQGTESEICNKQSGQCICREGFGGPR 570
Query: 121 CNECLDPNKKLGPNGCMP 138
C++CL P P+ C P
Sbjct: 571 CDQCL-PGFYNYPD-CKP 586
Score = 191 (72.3 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 45/124 (36%), Positives = 55/124 (44%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C PD+ G GC + C C S C T C CK GV G +CDRC +W
Sbjct: 2001 CKPDHYGFESG---VGCRA-CDCGA-ASNSTQCDPHTGHCACKSGVTGRQCDRCAVDHWK 2055
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNK--KLG 132
K DGC C C+Q S C TG+C C PGV G +C+ C PN+ +
Sbjct: 2056 YEK--------DGCTPCNCNQGYSRGFGCNPNTGKCQCLPGVIGDRCDAC--PNRWVLIK 2105
Query: 133 PNGC 136
GC
Sbjct: 2106 DEGC 2109
Score = 174 (66.3 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 58/194 (29%), Positives = 84/194 (43%)
Query: 8 CLDSWYGCCPDN-KTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCD 66
CL ++ G DN + G N S C C+ G+ + C + + QC C++G GG +CD
Sbjct: 516 CLTNFGG---DNCERCKHGYFNYPTCSYCDCDNQGTESEICNKQSGQCICREGFGGPRCD 572
Query: 67 RCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
+C PG++ +Y PD C C CS GS C+ TG+C C G +C C
Sbjct: 573 QCLPGFY------NY-PD---CKPCNCSSTGSSAITCDN-TGKCNCLNNFAGKQCTLCTA 621
Query: 127 PNKKLGPNGCMP------GMEVKPCNGEPPVI---NLQTGVELD-CGSG----ANREDCP 172
P+ C+P G + CN + + N G + D C G + EDC
Sbjct: 622 GYYSY-PD-CLPCHCDSHGSQGVSCNSDGQCLCQPNFD-GRQCDSCKEGFYNFPSCEDCN 678
Query: 173 SDAYCHITQNFARC 186
D + FA C
Sbjct: 679 CDP-AGVIDKFAGC 691
Score = 170 (64.9 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 38/108 (35%), Positives = 50/108 (46%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLK 90
C S C C+ LG+ C C C + V G +CDRC+P ++G S GC
Sbjct: 1967 CQS-CDCDDLGT--QTCDPFVGVCTCHENVIGDRCDRCKPDHYGFE--SGV-----GCRA 2016
Query: 91 CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP 138
C C S C+ TG C CK GV G +C+ C + K +GC P
Sbjct: 2017 CDCGA-ASNSTQCDPHTGHCACKSGVTGRQCDRCAVDHWKYEKDGCTP 2063
Score = 165 (63.1 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 35/98 (35%), Positives = 51/98 (52%)
Query: 35 CGCNKLGSTED--AC--IEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLK 90
C C+ G + C + E CKCK+ V G C+ C+P YW L+ IS+ +GC
Sbjct: 677 CNCDPAGVIDKFAGCGSVPVGELCKCKERVTGRICNECKPLYWNLN-ISN----TEGCEI 731
Query: 91 CGCSQFGSVR--EDCEQMTGRCVCKPGVKGSKCNECLD 126
C C G++ + C +G+C CKP +G +C EC D
Sbjct: 732 CDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQECRD 769
Score = 163 (62.4 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 36/112 (32%), Positives = 52/112 (46%)
Query: 30 GCPSTCGCNKLG--STEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
GC C CN +G + C C+C+Q + G CD C GY+ P
Sbjct: 1462 GCEE-CACNPMGIANGNSQCDLFNGTCECRQNIEGRACDVCSNGYFNF-------PH--- 1510
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKL---GPNGC 136
C +C C + G+ E C+++ G C CK V G C++C+D L P+GC
Sbjct: 1511 CEQCSCHKPGTELEVCDKIDGACFCKKNVVGRDCDQCVDGTYNLQESNPDGC 1562
Score = 149 (57.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 32/98 (32%), Positives = 44/98 (44%)
Query: 30 GCPSTCGCNKLG--STEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
GC C C G S D C + QC CK G +C C G + L S + G
Sbjct: 728 GC-EICDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQECRDGTFDLDSASLF-----G 781
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECL 125
C C C GS + C++++G+C C P + G C + L
Sbjct: 782 CKDCSCDVGGSWQSVCDKISGQCKCHPRITGLACTQPL 819
Score = 135 (52.6 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 49/147 (33%), Positives = 59/147 (40%)
Query: 7 SCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKC 65
SC D C P GP C C CN G +E C T C KC+ G G C
Sbjct: 1786 SCED----CAPGYYRDPSGPYGGYC-IPCECN--GHSE-TCDCATGICSKCQHGTEGDHC 1837
Query: 66 DRCEPGYWGLSKISSYAPDIDGCLKCGCS-QFGS--VREDCE-QMTG---RCVCKPGVKG 118
+RC GY+G ++ P C+ C C F S CE +G C CKPG G
Sbjct: 1838 ERCVSGYYG--NATNGTPG--DCMICACPLPFDSNNFATSCEISESGDQIHCECKPGYTG 1893
Query: 119 SKCNECLDPNKKLGPNGCMPGMEVKPC 145
+C C N G + G KPC
Sbjct: 1894 PRCESCA--NGFYGEPESI-GQVCKPC 1917
Score = 134 (52.2 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 35/101 (34%), Positives = 41/101 (40%)
Query: 28 NAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
N+G C C+ GST C QC+CK V C C Y+G PD
Sbjct: 1369 NSGA-LPCNCDYAGSTSFECHPFGGQCQCKPNVIERTCGACRSRYYGF-------PD--- 1417
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPN 128
C C C CE TG C+C P V G C +C PN
Sbjct: 1418 CKPCKCPNSAM----CEPTTGECMCPPNVIGDLCEKCA-PN 1453
Score = 133 (51.9 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 47/161 (29%), Positives = 69/161 (42%)
Query: 33 STCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
S C C+ ST C E+T C+C+ CD C GY+G Y P+ C +C
Sbjct: 401 SPCQCDYFFSTGH-CEEETGNCECRAAFQPPSCDSCAYGYYG------Y-PN---CRECE 449
Query: 93 CSQFGSVREDCEQMTGR-CVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPV 151
C+ G+ CE +G+ C CK G+ C +C + G G P + CN +
Sbjct: 450 CNLNGTNGYHCEAESGQQCPCKINFAGAYCKQCAE-----GYYG-FPECKACECNKIGSI 503
Query: 152 IN---LQTGVELDCGS---GANREDCPSDAYCHITQNFARC 186
N + TG E C + G N E C + + T ++ C
Sbjct: 504 TNDCNVTTG-ECKCLTNFGGDNCERCKHGYFNYPTCSYCDC 543
Score = 132 (51.5 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 45/184 (24%), Positives = 69/184 (37%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGC-PSTCGCNKLGSTEDACIEDTEQC-KCKQ 58
+G +SC + +YG + +++ Q C P C N + +C T +C +C
Sbjct: 1892 TGPRCESCANGFYG---EPESIGQV-----CKPCECSGNINPEDQGSCDTRTGECLRCLN 1943
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
G C+ C PG++G A + C C C G+ + C+ G C C V G
Sbjct: 1944 NTFGAACNLCAPGFYG------DAIKLKNCQSCDCDDLGT--QTCDPFVGVCTCHENVIG 1995
Query: 119 SKCNECLDPN----KKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSD 174
+C+ C + +G C G +P TG C SG C
Sbjct: 1996 DRCDRCKPDHYGFESGVGCRACDCGAASNSTQCDP-----HTG-HCACKSGVTGRQCDRC 2049
Query: 175 AYCH 178
A H
Sbjct: 2050 AVDH 2053
Score = 102 (41.0 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 24/70 (34%), Positives = 34/70 (48%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+K G+ + C + C CK+ V G CD+C G + L + + PD GC C C
Sbjct: 1514 CSCHKPGTELEVCDKIDGACFCKKNVVGRDCDQCVDGTYNLQESN---PD--GCTTCFC- 1567
Query: 95 QFGSVREDCE 104
FG C+
Sbjct: 1568 -FGKTSR-CD 1575
Score = 92 (37.4 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 20/64 (31%), Positives = 26/64 (40%)
Query: 109 RCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVK-PCNGEPPVINLQTGVELDCGSGAN 167
RC C PG G C +C P P+G G + CNG + TG+ C G
Sbjct: 1775 RCSCPPGYSGHSCEDCA-PGYYRDPSGPYGGYCIPCECNGHSETCDCATGICSKCQHGTE 1833
Query: 168 REDC 171
+ C
Sbjct: 1834 GDHC 1837
Score = 41 (19.5 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 169 EDCPSDAYCHITQNFARCCRK 189
++C D + HIT N + C+K
Sbjct: 1340 QNCGHDHF-HITHNASDFCKK 1359
Score = 37 (18.1 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 148 EPPVINLQTGVELDCGSGANRE 169
EP +++QT EL+ G NR+
Sbjct: 2585 EP--VSVQTPKELEKAHGINRD 2604
Score = 35 (17.4 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 6/16 (37%), Positives = 7/16 (43%)
Query: 171 CPSDAYCHITQNFARC 186
CP+ A C T C
Sbjct: 1423 CPNSAMCEPTTGECMC 1438
Score = 35 (17.4 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 5/7 (71%), Positives = 6/7 (85%)
Query: 31 CPSTCGC 37
CPS+ GC
Sbjct: 1273 CPSSSGC 1279
>UNIPROTKB|E1BDK6 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IEA] [GO:0072249 "metanephric glomerular
visceral epithelial cell development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0048677
"axon extension involved in regeneration" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0014044 "Schwann cell development"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249
EMBL:DAAA02054428 IPI:IPI00904771 UniGene:Bt.7183
Ensembl:ENSBTAT00000057452 NextBio:20873039 ArrayExpress:E1BDK6
Uniprot:E1BDK6
Length = 1802
Score = 197 (74.4 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 49/157 (31%), Positives = 68/157 (43%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P +L+ N P C C+ GS C QC+CK V G +CD C PGY+G
Sbjct: 769 CAPLLISLSTLLYNGALP--CQCDPQGSLSSECNPHGGQCRCKPAVVGRRCDLCAPGYYG 826
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN 134
+ P GC C CS G++ C+ +G+C C+ G G +C+ C + G
Sbjct: 827 ------FGPT--GCQACQCSPEGALSGLCDATSGQCPCRAGAFGLRCDRC--QRGQWGFP 876
Query: 135 GCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
C P + C+G + TG L C E C
Sbjct: 877 SCRPCV----CHGHADECDPNTGTCLGCRDHTGGEHC 909
Score = 185 (70.2 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 38/110 (34%), Positives = 50/110 (45%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P+ L G GC C C+ + AC E T QC C+ G GG C C+ +WG
Sbjct: 1083 CAPNFWNLTSG---RGC-QPCACHPSRARGPACNEFTGQCHCRAGFGGRTCSECQELHWG 1138
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
P + C C C G C + TG C C+PGV G +C++C
Sbjct: 1139 -------DPGLQ-CRACDCDPRGIDTPQCHRSTGHCSCRPGVSGVRCDQC 1180
Score = 179 (68.1 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 47/152 (30%), Positives = 64/152 (42%)
Query: 25 GPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
G D CPST CN C + QC C V GL CDRC P +W L+
Sbjct: 1048 GTDARQCPSTDHCN--------CDPSSGQCPCLPNVQGLSCDRCAPNFWNLTSGR----- 1094
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKP 144
GC C C + C + TG+C C+ G G C+EC + + G PG++ +
Sbjct: 1095 --GCQPCACHPSRARGPACNEFTGQCHCRAGFGGRTCSECQELH--WGD----PGLQCRA 1146
Query: 145 CNGEP-----PVINLQTGVELDCGSGANREDC 171
C+ +P P + TG C G + C
Sbjct: 1147 CDCDPRGIDTPQCHRSTG-HCSCRPGVSGVRC 1177
Score = 170 (64.9 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 39/124 (31%), Positives = 59/124 (47%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDA--CIEDTEQCKCKQG 59
G + C D ++G +N P GC C C+ G+ C ++ C CK+
Sbjct: 450 GSRCQQCRDGFFGLSANN------P--LGC-QRCQCDPRGTVPGGTPCDRNSGACFCKRL 500
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGS 119
V G C+RC PG+WGLS D+ GC C C G++ C + TG+C C+ + G
Sbjct: 501 VTGQGCNRCLPGHWGLSH------DLLGCRPCDCDIGGALDPQCNEATGQCRCRQHMVGR 554
Query: 120 KCNE 123
+C +
Sbjct: 555 RCEQ 558
Score = 164 (62.8 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 44/125 (35%), Positives = 63/125 (50%)
Query: 27 DNAGCPSTCGCNKLGSTEDA-CI--ED------TEQCKCKQGVGGLKCDRCEPGYWGLSK 77
D A C S C C+ +GS + C +D + QC+CK+ V G +C +C G++GLS
Sbjct: 407 DPAVCRS-CDCDPMGSQDGGRCDPHDDPALGLVSGQCRCKEHVVGSRCQQCRDGFFGLS- 464
Query: 78 ISSYAPDIDGCLKCGCSQFGSVR--EDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN- 134
A + GC +C C G+V C++ +G C CK V G CN CL + L +
Sbjct: 465 ----ANNPLGCQRCQCDPRGTVPGGTPCDRNSGACFCKRLVTGQGCNRCLPGHWGLSHDL 520
Query: 135 -GCMP 138
GC P
Sbjct: 521 LGCRP 525
Score = 154 (59.3 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 48/169 (28%), Positives = 67/169 (39%)
Query: 15 CCPDNKTLAQGPDNAGC-PSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGY 72
C P + P GC P C N + DAC + QC C G +C C+PG+
Sbjct: 972 CAPGHFGDPSRP-GGGCQPCECSGNIDPTDPDACDPHSGQCLHCLYHTEGPRCAHCKPGF 1030
Query: 73 WGLSKISSYAPDIDGCLKCGCSQFGS-VRE-------DCEQMTGRCVCKPGVKGSKCNEC 124
G + S C +C C+ G+ R+ +C+ +G+C C P V+G C+ C
Sbjct: 1031 HGQAARQS-------CHRCTCNLLGTDARQCPSTDHCNCDPSSGQCPCLPNVQGLSCDRC 1083
Query: 125 LDPN--KKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
PN GC P P P N TG + C +G C
Sbjct: 1084 A-PNFWNLTSGRGCQP-CACHPSRARGPACNEFTG-QCHCRAGFGGRTC 1129
Score = 151 (58.2 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 39/120 (32%), Positives = 52/120 (43%)
Query: 25 GPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
GP GC + C C+ G+ C + QC C+ G GL+CDRC+ G WG P
Sbjct: 828 GP--TGCQA-CQCSPEGALSGLCDATSGQCPCRAGAFGLRCDRCQRGQWGF-------PS 877
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNECL-----DPNKKLGPNGCMP 138
C C C G ++C+ TG C+ C+ G C C+ DP G C P
Sbjct: 878 ---CRPCVCH--GHA-DECDPNTGTCLGCRDHTGGEHCERCIAGFHGDPRLPYGGQ-CRP 930
Score = 117 (46.2 bits), Expect = 0.00044, P = 0.00044
Identities = 35/130 (26%), Positives = 55/130 (42%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIED--TEQ--CKCK 57
G + + C+ ++G + L G CP G +C D ++Q C C+
Sbjct: 906 GEHCERCIAGFHG----DPRLPYGGQCRPCPCPEGPGSRRHFATSCHRDGYSQQVVCHCR 961
Query: 58 QGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS-QFGSVRED-CEQMTGRCV-CKP 114
G GL+C+ C PG++G P GC C CS D C+ +G+C+ C
Sbjct: 962 AGYTGLRCEACAPGHFG----DPSRPG-GGCQPCECSGNIDPTDPDACDPHSGQCLHCLY 1016
Query: 115 GVKGSKCNEC 124
+G +C C
Sbjct: 1017 HTEGPRCAHC 1026
Score = 107 (42.7 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C P + L+ D GC C C+ G+ + C E T QC+C+Q + G +C++ +PGY+
Sbjct: 509 CLPGHWGLSH--DLLGC-RPCDCDIGGALDPQCNEATGQCRCRQHMVGRRCEQVQPGYF 564
Score = 56 (24.8 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 34/130 (26%), Positives = 48/130 (36%)
Query: 68 CEPGYWGLSKISSYAP----DID----GCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGS 119
C GY GL + + AP D GC C CS G++ T C P
Sbjct: 960 CRAGYTGL-RCEACAPGHFGDPSRPGGGCQPCECS--GNI-----DPTDPDACDP--HSG 1009
Query: 120 KCNECLDPNKKLGPN--GCMPGMEVKPCNGEPPVINLQTGVELDCGS-GANREDCPSDAY 176
+C CL + GP C PG +G+ Q+ C G + CPS +
Sbjct: 1010 QCLHCLYHTE--GPRCAHCKPGF-----HGQAA---RQSCHRCTCNLLGTDARQCPSTDH 1059
Query: 177 CHITQNFARC 186
C+ + +C
Sbjct: 1060 CNCDPSSGQC 1069
>FB|FBgn0002528 [details] [associations]
symbol:LanB2 "Laminin B2" species:7227 "Drosophila
melanogaster" [GO:0005604 "basement membrane" evidence=ISS;NAS;IDA]
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0005605 "basal
lamina" evidence=IDA] [GO:0009887 "organ morphogenesis"
evidence=NAS] [GO:0009888 "tissue development" evidence=NAS]
[GO:0048598 "embryonic morphogenesis" evidence=NAS] EMBL:AE014296
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0005605
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR009030 SUPFAM:SSF57184
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
GeneTree:ENSGT00690000102103 OMA:DRCKENK KO:K05635 EMBL:M58417
EMBL:M25063 EMBL:BT021394 PIR:A31483 RefSeq:NP_524006.1
UniGene:Dm.2551 ProteinModelPortal:P15215 SMR:P15215 DIP:DIP-21994N
IntAct:P15215 MINT:MINT-810240 STRING:P15215 PaxDb:P15215
PRIDE:P15215 EnsemblMetazoa:FBtr0076382 GeneID:39118
KEGG:dme:Dmel_CG3322 CTD:39118 FlyBase:FBgn0002528
HOGENOM:HOG000264193 InParanoid:P15215 OrthoDB:EOG434TMX
PhylomeDB:P15215 GenomeRNAi:39118 NextBio:812009 Bgee:P15215
GermOnline:CG3322 Uniprot:P15215
Length = 1639
Score = 196 (74.1 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 46/131 (35%), Positives = 61/131 (46%)
Query: 27 DNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
D+ C + C C+ +GS C +C+CK GV G KCDRC+ Y+ + P
Sbjct: 407 DDGYCVN-CACDPVGSRSLQC-NSHGKCQCKPGVTGDKCDRCDNNYY------QFGPH-- 456
Query: 87 GCLKCGCSQFGSVRED--CEQMTGRCVCKPGVKGSKCNEC------LDPNKKLGPNGCMP 138
GC +CGC GS + C+ TG C CK V+G +CNEC LD N + G C
Sbjct: 457 GCQQCGCDSGGSHQNTPACDTETGICFCKENVEGRRCNECKPGFFNLDKNNRFGCTPCFC 516
Query: 139 GMEVKPCNGEP 149
C P
Sbjct: 517 YGHTSECMTAP 527
Score = 196 (74.1 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 61/203 (30%), Positives = 89/203 (43%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDA-----CIEDTEQCK 55
+G + CL +G D L G C C C + G+ +D C + T QC+
Sbjct: 876 AGEHCDQCLSGHFG---DPLALPHGR----C-DRCSCYEAGTEQDEQSITRCDQVTGQCQ 927
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
CK V G C C+PGY+ + S +GC C C GS C++ +G+C C+PG
Sbjct: 928 CKPNVIGRDCGECQPGYFNIR--SG-----NGCENCLCDPVGSYNSTCDRYSGQCHCRPG 980
Query: 116 VKGSKCNECLDPNKKLGPNGCMP------GMEVKPC--NGEPPVINLQTGVELD-CGSGA 166
V G +C++C + GC P G + C NG+ P + G D C
Sbjct: 981 VMGQRCDQCENYFYGFSSEGCKPCECDESGSKGFQCDQNGQCPCNDNVEGRRCDRCKENK 1040
Query: 167 -NRE----DCPSDAYCHITQNFA 184
+R DCP D Y ++ Q+ A
Sbjct: 1041 YDRHRGCIDCP-DCY-NLVQDAA 1061
Score = 158 (60.7 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 42/136 (30%), Positives = 58/136 (42%)
Query: 35 CGCNKLGSTEDACIEDTE---------QC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
C CN L D C D C C++ G C+RC+ + Y D
Sbjct: 359 CNCNGLA---DKCFFDANLFNRTGHGGHCLDCRENRDGPNCERCKENF--------YMRD 407
Query: 85 IDG-CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP-GMEV 142
DG C+ C C GS C G+C CKPGV G KC+ C + + GP+GC G +
Sbjct: 408 -DGYCVNCACDPVGSRSLQCNSH-GKCQCKPGVTGDKCDRCDNNYYQFGPHGCQQCGCDS 465
Query: 143 KPCNGEPPVINLQTGV 158
+ P + +TG+
Sbjct: 466 GGSHQNTPACDTETGI 481
Score = 151 (58.2 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 48/148 (32%), Positives = 69/148 (46%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTE-DA---CIEDTEQC-KC 56
G + C D ++G + T G C S C CN G+ + +A C T +C KC
Sbjct: 820 GSRCEQCSDGFFG----DPTGLLGEVQT-CKS-CDCN--GNVDPNAVGNCNRTTGECLKC 871
Query: 57 KQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED-----CEQMTGRCV 111
G CD+C G++G A C +C C + G+ +++ C+Q+TG+C
Sbjct: 872 IHNTAGEHCDQCLSGHFG----DPLALPHGRCDRCSCYEAGTEQDEQSITRCDQVTGQCQ 927
Query: 112 CKPGVKGSKCNECLDP---NKKLGPNGC 136
CKP V G C EC P N + G NGC
Sbjct: 928 CKPNVIGRDCGEC-QPGYFNIRSG-NGC 953
Score = 143 (55.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 42/135 (31%), Positives = 60/135 (44%)
Query: 52 EQCKCKQGVGGLKCDRCEPGY-WGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRC 110
EQC C +G G C+ C PGY ++ + P C+ C C + C+ TGRC
Sbjct: 708 EQCTCPEGYLGQFCESCAPGYRHSPARGGPFMP----CIPCDCHGHADI---CDSETGRC 760
Query: 111 VCKPGVKGSKCNECLDP--NKKLG--PNGCMPGMEVKPC--NGEPPVINLQTGVELDCGS 164
+C+ G C++C LG PN C + PC +G IN T + +C
Sbjct: 761 ICQHNTHGDNCDQCAKGFYGNALGGTPNDC----KRCPCPNDGACLQINEDTVICTECPK 816
Query: 165 G--ANR-EDCPSDAY 176
G +R E C SD +
Sbjct: 817 GYFGSRCEQC-SDGF 830
Score = 132 (51.5 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 33/93 (35%), Positives = 46/93 (49%)
Query: 18 DNKTLAQGPDNAGCPSTCGCNKLGSTED--ACIEDTEQCKCKQGVGGLKCDRCEPGYWGL 75
DN GP GC CGC+ GS ++ AC +T C CK+ V G +C+ C+PG++ L
Sbjct: 447 DNNYYQFGPH--GCQQ-CGCDSGGSHQNTPACDTETGICFCKENVEGRRCNECKPGFFNL 503
Query: 76 SKISSYAPDIDGCLKCGCSQFGSVREDCEQMTG 108
K + + GC C C +G E C G
Sbjct: 504 DKNNRF-----GCTPCFC--YGHTSE-CMTAPG 528
Score = 130 (50.8 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 49/168 (29%), Positives = 71/168 (42%)
Query: 15 CCPDNK-TLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C P + + A+G C C C+ G D C +T +C C+ G CD+C G++
Sbjct: 724 CAPGYRHSPARGGPFMPC-IPCDCH--GHA-DICDSETGRCICQHNTHGDNCDQCAKGFY 779
Query: 74 GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNECLDPNKKLG 132
G + + D C +C C G+ + E T C C G GS+C +C D G
Sbjct: 780 G-NALGGTPND---CKRCPCPNDGACLQINED-TVICTECPKGYFGSRCEQCSDGF--FG 832
Query: 133 -PNGCMPGMEV-KPC--NG--EPPVI---NLQTGVELDCGSGANREDC 171
P G + ++ K C NG +P + N TG L C E C
Sbjct: 833 DPTGLLGEVQTCKSCDCNGNVDPNAVGNCNRTTGECLKCIHNTAGEHC 880
>UNIPROTKB|F1SPT5 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IEA] [GO:0072249 "metanephric glomerular
visceral epithelial cell development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0048677
"axon extension involved in regeneration" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0014044 "Schwann cell development"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249 EMBL:CU856115
Ensembl:ENSSSCT00000012455 ArrayExpress:F1SPT5 Uniprot:F1SPT5
Length = 1642
Score = 196 (74.1 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 47/144 (32%), Positives = 62/144 (43%)
Query: 28 NAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
N P C C+ GS C QC CK V G +C+ C PGY+G + P G
Sbjct: 780 NGALP--CQCDPQGSLSSECNPHGGQCLCKPAVVGRRCNICAPGYYG------FGPT--G 829
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNG 147
C C CS G++ CE +G+C C+ G G +C+ C + G C P + CNG
Sbjct: 830 CQACQCSPEGALSGLCEATSGQCPCRTGAFGLRCDRC--QRGQWGFPSCRPCV----CNG 883
Query: 148 EPPVINLQTGVELDCGSGANREDC 171
+ TG L C E C
Sbjct: 884 HADECDTHTGTCLGCRDHTGGEHC 907
Score = 179 (68.1 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 40/123 (32%), Positives = 52/123 (42%)
Query: 16 CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGL 75
C + L G GC C C+ S C E T QC C+ G GG C C+ +WG
Sbjct: 1079 CAPSWNLTSG---RGC-QPCACHPSRSRGPTCNEFTGQCHCRTGFGGRTCSECQELHWG- 1133
Query: 76 SKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNG 135
P + C C C G C + TG C C+PGV G +C++C + P
Sbjct: 1134 ------DPGLQ-CRACDCDPRGIDTPQCHRSTGHCSCRPGVSGVRCDQCARGFSGIFP-A 1185
Query: 136 CMP 138
C P
Sbjct: 1186 CHP 1188
Score = 167 (63.8 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 38/114 (33%), Positives = 54/114 (47%)
Query: 16 CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C D D GC C C+ G+ C ++ C CK+ V G C+RC PG+W
Sbjct: 454 CRDGFFGLSASDALGC-QRCQCDTRGTVPGGTPCDRNSGACFCKRLVTGRGCNRCLPGHW 512
Query: 74 GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDP 127
GLS D+ GC C C G++ C + TG+C C+ + G +C E + P
Sbjct: 513 GLSH------DLLGCRPCDCDIGGALDPQCNEATGQCRCRQHMVG-RCCEQVQP 559
Score = 167 (63.8 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 44/125 (35%), Positives = 62/125 (49%)
Query: 27 DNAGCPSTCGCNKLGSTEDA-CI--ED------TEQCKCKQGVGGLKCDRCEPGYWGLSK 77
D C S C C+ +GS + C +D + QC+CK+ V G +C +C G++GLS
Sbjct: 405 DPGVCRS-CDCDPMGSQDGGRCDPHDDPALGLVSGQCRCKEHVVGSRCQQCRDGFFGLS- 462
Query: 78 ISSYAPDIDGCLKCGCSQFGSVR--EDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN- 134
A D GC +C C G+V C++ +G C CK V G CN CL + L +
Sbjct: 463 ----ASDALGCQRCQCDTRGTVPGGTPCDRNSGACFCKRLVTGRGCNRCLPGHWGLSHDL 518
Query: 135 -GCMP 138
GC P
Sbjct: 519 LGCRP 523
Score = 155 (59.6 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 44/150 (29%), Positives = 61/150 (40%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVG--------GLKCDRCEPGYWGLSKISSYAPDID 86
C CN LG+ C ++C C Q G L CDRC P W L+
Sbjct: 1039 CNCNLLGTDPQQC-PSPDRCNCDQSSGQCPCLSQRDLSCDRCAPS-WNLTSGR------- 1089
Query: 87 GCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCN 146
GC C C S C + TG+C C+ G G C+EC + + G PG++ + C+
Sbjct: 1090 GCQPCACHPSRSRGPTCNEFTGQCHCRTGFGGRTCSECQELH--WGD----PGLQCRACD 1143
Query: 147 GEP-----PVINLQTGVELDCGSGANREDC 171
+P P + TG C G + C
Sbjct: 1144 CDPRGIDTPQCHRSTG-HCSCRPGVSGVRC 1172
Score = 153 (58.9 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 39/120 (32%), Positives = 53/120 (44%)
Query: 25 GPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
GP GC + C C+ G+ C + QC C+ G GL+CDRC+ G WG P
Sbjct: 826 GP--TGCQA-CQCSPEGALSGLCEATSGQCPCRTGAFGLRCDRCQRGQWGF-------PS 875
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCV-CKPGVKGSKCNECL-----DPNKKLGPNGCMP 138
C C C+ G ++C+ TG C+ C+ G C C+ DP G C P
Sbjct: 876 ---CRPCVCN--GHA-DECDTHTGTCLGCRDHTGGEHCERCIAGFHGDPRLPYGGQ-CRP 928
Score = 133 (51.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 39/147 (26%), Positives = 57/147 (38%)
Query: 35 CGCNKLGSTE-DACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
C C + T+ DAC + QC +C G C C+PG+ G + S C +C
Sbjct: 988 CECGNIDPTDPDACDPHSGQCLRCLHHTEGPHCAHCKPGFHGQAARQS-------CHRCN 1040
Query: 93 CSQFGSV--------REDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKP 144
C+ G+ R +C+Q +G+C C + C+ C GC P P
Sbjct: 1041 CNLLGTDPQQCPSPDRCNCDQSSGQCPCL-SQRDLSCDRCAPSWNLTSGRGCQP-CACHP 1098
Query: 145 CNGEPPVINLQTGVELDCGSGANREDC 171
P N TG + C +G C
Sbjct: 1099 SRSRGPTCNEFTG-QCHCRTGFGGRTC 1124
Score = 129 (50.5 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 33/103 (32%), Positives = 47/103 (45%)
Query: 66 DRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECL 125
+ C+P LS + Y +G L C C GS+ +C G+C+CKP V G +CN C
Sbjct: 765 EACDPLLISLSTLL-Y----NGALPCQCDPQGSLSSECNPHGGQCLCKPAVVGRRCNICA 819
Query: 126 DPNKKLGPNGCMPGMEVKPCNGEPPVINL--QTGVELDCGSGA 166
GP GC + C+ E + L T + C +GA
Sbjct: 820 PGYYGFGPTGC----QACQCSPEGALSGLCEATSGQCPCRTGA 858
Score = 102 (41.0 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C P + L+ D GC C C+ G+ + C E T QC+C+Q + G C++ +PGY+
Sbjct: 507 CLPGHWGLSH--DLLGC-RPCDCDIGGALDPQCNEATGQCRCRQHMVGRCCEQVQPGYF 562
Score = 58 (25.5 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 33/126 (26%), Positives = 49/126 (38%)
Query: 68 CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCE----QMTGRCVCKPGVKGSKCNE 123
C GY GL + + AP G S+ G + CE T C P +C
Sbjct: 958 CRAGYTGL-RCEACAPGHFG----DPSRPGGRCQPCECGNIDPTDPDACDP--HSGQCLR 1010
Query: 124 CLDPNKKLGPN--GCMPGMEVKPCNGEPPVINLQTGVELDCGS-GANREDCPSDAYCHIT 180
CL + GP+ C PG +G+ Q+ +C G + + CPS C+
Sbjct: 1011 CLHHTE--GPHCAHCKPGF-----HGQAA---RQSCHRCNCNLLGTDPQQCPSPDRCNCD 1060
Query: 181 QNFARC 186
Q+ +C
Sbjct: 1061 QSSGQC 1066
Score = 38 (18.4 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 13/44 (29%), Positives = 17/44 (38%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACI----EDTEQC 54
C P L D STCG L + CI +D ++C
Sbjct: 50 CYPATDLLVGRADRLTASSTCG---LHGPQPYCIVSHLQDEKKC 90
>UNIPROTKB|F1NQ51 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005610 "laminin-5 complex" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:DSCQGCS GO:GO:0005610 EMBL:AADN02021360
EMBL:AADN02021358 EMBL:AADN02021359 IPI:IPI00597868
Ensembl:ENSGALT00000024287 Uniprot:F1NQ51
Length = 3356
Score = 199 (75.1 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 44/117 (37%), Positives = 63/117 (53%)
Query: 29 AGCPSTCGCNKLGSTEDA---CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
AGC S C C++ G A C ++ QCKCK G+ G +CDRC PG +Y D
Sbjct: 1362 AGCES-CNCSERGVVNAARPECEKNNGQCKCKPGIRGRQCDRCAPG--------TY--DF 1410
Query: 86 DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC------LDPNKKLGPNGC 136
C+ C C++ G+ + C+ TG C+CK V+G++C+ C LDP+ P GC
Sbjct: 1411 PNCIPCKCNRDGTEPDVCDPQTGICLCKENVEGAECDICRPGSFYLDPSN---PKGC 1464
Score = 181 (68.8 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 55/148 (37%), Positives = 73/148 (49%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
G PS CN G + C + T +C C KC+ CE Y+ SY P + GC
Sbjct: 1316 GFPSCKLCN-CG--QRLCDDLTGKCICPPRTVKPKCEVCERYYF------SYHP-LAGCE 1365
Query: 90 KCGCSQFGSV---REDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCN 146
C CS+ G V R +CE+ G+C CKPG++G +C+ C P PN C+P K CN
Sbjct: 1366 SCNCSERGVVNAARPECEKNNGQCKCKPGIRGRQCDRCA-PGTYDFPN-CIP---CK-CN 1419
Query: 147 --G-EPPVINLQTGVELDCGSGANREDC 171
G EP V + QTG+ L C +C
Sbjct: 1420 RDGTEPDVCDPQTGICL-CKENVEGAEC 1446
Score = 178 (67.7 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 43/124 (34%), Positives = 60/124 (48%)
Query: 29 AGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
AG + C CN +G+ + C + +C C+ GV GL+CD C+PG+ S+ C
Sbjct: 486 AGDITVCECNSVGTQPEVC-DFLGRCLCRSGVVGLQCDSCQPGH------HSFPV----C 534
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD--PNKKL--GPNG-CMPGMEVK 143
C CS GS CE TG+C C+ V G +C+ C+ PN G N C P V
Sbjct: 535 EACQCSPLGSRHSICEPTTGQCECQTNVTGRQCDRCISAAPNFPYCEGINSECNPSGSVD 594
Query: 144 PCNG 147
+G
Sbjct: 595 SHSG 598
Score = 162 (62.1 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 40/127 (31%), Positives = 59/127 (46%)
Query: 19 NKTLAQGPDNAGCPS-TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSK 77
++ ++ P+ C CN GS + + C+C Q V G C +C+P YW L++
Sbjct: 568 DRCISAAPNFPYCEGINSECNPSGSVDS----HSGYCQCLQHVEGPTCSKCKPLYWNLAE 623
Query: 78 ISSYAPDIDGCLKCGCSQFGSVRE--DCEQMTGRCVCKPGVKGSKCNEC------LDPNK 129
+ P+ GC C C G++ +C+Q TGRC CK V G CN C L+
Sbjct: 624 EN---PE--GCTACQCDVSGTLSGVGECQQETGRCYCKSNVCGDFCNTCEAGYYALENKN 678
Query: 130 KLGPNGC 136
G GC
Sbjct: 679 YFGCKGC 685
Score = 155 (59.6 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 38/117 (32%), Positives = 55/117 (47%)
Query: 15 CCPDNKTLAQ-GPDNAGCPSTCGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPG 71
C P LA+ P+ GC + C C+ G+ C ++T +C CK V G C+ CE G
Sbjct: 614 CKPLYWNLAEENPE--GC-TACQCDVSGTLSGVGECQQETGRCYCKSNVCGDFCNTCEAG 670
Query: 72 YWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPN 128
Y+ L + + GC C C GS+ C + +G C C+ V G C E + N
Sbjct: 671 YYALENKNYF-----GCKGCQCDVGGSISFACAEPSGACQCREHVVGKACQERPEKN 722
Score = 148 (57.2 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 35/110 (31%), Positives = 48/110 (43%)
Query: 16 CPDN-KTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C D+ ++L +N P C C+ GS C QC C+ V G +C RC+ GY+G
Sbjct: 1259 CKDSARSLVAFYNNGAVP--CNCHSEGSMSPTCSPLGGQCICRPNVIGRQCSRCQTGYYG 1316
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
P C C C Q C+ +TG+C+C P KC C
Sbjct: 1317 F-------PS---CKLCNCGQ-----RLCDDLTGKCICPPRTVKPKCEVC 1351
Score = 148 (57.2 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 40/139 (28%), Positives = 58/139 (41%)
Query: 7 SCLDSWYGCCPDNKTLAQGPDNAGCPSTCG-CNKLGSTEDACIE-DTEQ----------- 53
+C ++ CCP P AG + C CN G D + D +Q
Sbjct: 324 TCGETCDRCCPGYNQKQWQPATAGNINICEPCNCHGHATDCYYDADVDQRRESLNIHGHY 383
Query: 54 -----C-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMT 107
C C+ G+ C++C GY+ + + APD GC+ C C + E CE+ +
Sbjct: 384 EGGGVCINCQHNTAGVNCEKCAKGYYRPYGVPARAPD--GCISCPCDLERA--EGCEEGS 439
Query: 108 GRCVCKPGVKGSKCNECLD 126
GRC CK +G C C D
Sbjct: 440 GRCFCKWNFQGENCEHCAD 458
Score = 144 (55.7 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 54/199 (27%), Positives = 81/199 (40%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
+G+ + C +Y P A+ PD GC S C C+ L E C E + +C CK
Sbjct: 397 AGVNCEKCAKGYYR--PYGVP-ARAPD--GCIS-CPCD-LERAE-GCEEGSGRCFCKWNF 448
Query: 61 GGLKCDRCEPGYWGL-----SKISSY---APD----IDGCLK-CGCSQFGSVREDCEQMT 107
G C+ C G++ I Y +P+ I G + C C+ G+ E C+ +
Sbjct: 449 QGENCEHCADGFYSFPFCIRKDIPVYPFTSPNPRDAIAGDITVCECNSVGTQPEVCDFL- 507
Query: 108 GRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGAN 167
GRC+C+ GV G +C+ C P P C + P + TG + +C +
Sbjct: 508 GRCLCRSGVVGLQCDSC-QPGHHSFPV-C-EACQCSPLGSRHSICEPTTG-QCECQTNVT 563
Query: 168 REDCPSDAYCHITQNFARC 186
C D NF C
Sbjct: 564 GRQC--DRCISAAPNFPYC 580
Score = 136 (52.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 32/110 (29%), Positives = 48/110 (43%)
Query: 8 CLDSWYGCCPDNKTLAQ----GPDNAGCPSTCGCNKLGSTEDACIEDTE--QCKCKQGVG 61
C++ Y + L + G G C C C+ + QC CK+G
Sbjct: 1716 CINCQYNTAGEKCELCKDGYFGDATQGSCRICPCPYTNRFATGCVANGGEIQCLCKEGYT 1775
Query: 62 GLKCDRCEPGYWGL-SKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRC 110
G++C+RC PGY+G K Y C KC C+ G + C+++TG C
Sbjct: 1776 GVRCERCAPGYFGNPQKYGGY------CQKCNCNNNGQLAS-CDRLTGEC 1818
Score = 121 (47.7 bits), Expect = 0.00026, P = 0.00026
Identities = 36/121 (29%), Positives = 51/121 (42%)
Query: 7 SCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKC 65
SC D G ++K L G C C CN G++ + C + T +C C+ G KC
Sbjct: 1677 SCQDCGLGFYRESKGLFSGR----CVP-CNCN--GNS-NRCHDGTGKCINCQYNTAGEKC 1728
Query: 66 DRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTG--RCVCKPGVKGSKCNE 123
+ C+ GY+G + S C C C C G +C+CK G G +C
Sbjct: 1729 ELCKDGYFGDATQGS-------CRICPCPYTNRFATGCVANGGEIQCLCKEGYTGVRCER 1781
Query: 124 C 124
C
Sbjct: 1782 C 1782
>ZFIN|ZDB-GENE-040724-213 [details] [associations]
symbol:lama4 "laminin, alpha 4" species:7955 "Danio
rerio" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0048514 "blood vessel morphogenesis" evidence=IGI] [GO:0030903
"notochord development" evidence=IGI] [GO:0016203 "muscle
attachment" evidence=IGI;IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 ZFIN:ZDB-GENE-040724-213 GO:GO:0030155
GO:GO:0048514 GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016203
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GO:GO:0030903 GO:GO:0005606 CTD:3910
HOVERGEN:HBG052299 KO:K06241 EMBL:AY862414 IPI:IPI00862172
RefSeq:NP_001034154.1 UniGene:Dr.87613 ProteinModelPortal:Q2TJF5
STRING:Q2TJF5 GeneID:566796 KEGG:dre:566796 NextBio:20888381
Uniprot:Q2TJF5
Length = 1871
Score = 188 (71.2 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 46/134 (34%), Positives = 61/134 (45%)
Query: 8 CLDSWYGCCPDN-KTLAQG--PD--NAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGG 62
CL+ W DN + A G D +A C CNK G+ +C + + C CK GV G
Sbjct: 177 CLNCWGDTAGDNCERCAPGFYGDAISAKDCQECQCNKCGTA--SCDDRSGVCHCKPGVTG 234
Query: 63 LKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN 122
CDRCE G+ G GC +C C+ ++R C +T C C+PG G C
Sbjct: 235 QLCDRCEDGHSGFCTCM-------GCRRCECAS-AALRATCHPLTHSCQCRPGAGGRYCE 286
Query: 123 ECLDPNKKLGPNGC 136
CL P+GC
Sbjct: 287 RCLPGFWDYSPSGC 300
Score = 139 (54.0 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 34/98 (34%), Positives = 46/98 (46%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC C C + C T C+C+ G GG C+RC PG+W Y+P GC
Sbjct: 252 GC-RRCECAS-AALRATCHPLTHSCQCRPGAGGRYCERCLPGFW------DYSPS--GCR 301
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKG-SKCNECLD 126
KC C + E+C+ TG C+ P + S+CN D
Sbjct: 302 KCDCPE-----ENCDLHTGECL--PELSQISECNISCD 332
Score = 123 (48.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 41/137 (29%), Positives = 53/137 (38%)
Query: 1 SGIYLKSCLDSWYG--C--CPDNKTLAQGPDNAGCPSTCGCN-KLGSTEDA--CIEDTE- 52
+GI + C D G C C D PD C C L S A C E
Sbjct: 62 TGICI-DCRDHTLGDFCELCEDRFLPVFLPDGTFMCRPCACPLSLESNNFAAHCDRRGEF 120
Query: 53 -QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC---SQFGSVREDCEQMTG 108
+C C+ G G C+RC PGY+G + C KC C S + +C +TG
Sbjct: 121 LRCVCQDGYAGHYCERCAPGYYGNPMELG-----NSCKKCDCNGNSDPNLIFNECHNVTG 175
Query: 109 RCV-CKPGVKGSKCNEC 124
+C+ C G C C
Sbjct: 176 KCLNCWGDTAGDNCERC 192
Score = 37 (18.1 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 130 KLGPNGCMPGMEVKPCNGEPPVIN 153
KLG + KP + PPV N
Sbjct: 964 KLGEEEVEIPLSSKPVSSWPPVFN 987
>MGI|MGI:99892 [details] [associations]
symbol:Lama1 "laminin, alpha 1" species:10090 "Mus musculus"
[GO:0002011 "morphogenesis of an epithelial sheet" evidence=IMP]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=TAS]
[GO:0005606 "laminin-1 complex" evidence=ISO;IDA] [GO:0005608
"laminin-3 complex" evidence=ISO] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0005911 "cell-cell junction" evidence=IDA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007166 "cell surface
receptor signaling pathway" evidence=IDA] [GO:0009888 "tissue
development" evidence=IMP] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0031175 "neuron projection development" evidence=IDA]
[GO:0043208 "glycosphingolipid binding" evidence=IDA] [GO:0043256
"laminin complex" evidence=IDA] [GO:0045198 "establishment of
epithelial cell apical/basal polarity" evidence=IMP] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0060441
"epithelial tube branching involved in lung morphogenesis"
evidence=IMP] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IMP] [GO:0061304 "retinal blood vessel
morphogenesis" evidence=IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 MGI:MGI:99892 GO:GO:0030155 GO:GO:0007155
GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 Reactome:REACT_127416 GO:GO:0007166
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031175 GO:GO:0060441
GO:GO:0060445 Pfam:PF02210 GO:GO:0045198 GO:GO:0045995
GO:GO:0005201 GO:GO:0043208 GO:GO:0002011 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 CTD:284217 eggNOG:NOG247347 HOGENOM:HOG000293201
HOVERGEN:HBG052298 KO:K05637 OrthoDB:EOG4K3KVB GO:GO:0005606
EMBL:J04064 EMBL:X07737 EMBL:X13459 EMBL:M36775 IPI:IPI00113726
PIR:A31771 RefSeq:NP_032506.2 UniGene:Mm.303386 PDB:2JD4
PDBsum:2JD4 ProteinModelPortal:P19137 SMR:P19137 MINT:MINT-2635122
STRING:P19137 PhosphoSite:P19137 PaxDb:P19137 PRIDE:P19137
GeneID:16772 KEGG:mmu:16772 UCSC:uc008dkh.1 InParanoid:P19137
EvolutionaryTrace:P19137 NextBio:290602 CleanEx:MM_LAMA1
Genevestigator:P19137 GermOnline:ENSMUSG00000032796 Uniprot:P19137
Length = 3084
Score = 198 (74.8 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 47/137 (34%), Positives = 64/137 (46%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVG 61
G + + C D +YG D T C + C C++ GS C +T C CK V
Sbjct: 886 GAHCERCADGFYG---DAVTAKN------CRA-CDCHENGSLSGVCHLETGLCDCKPHVT 935
Query: 62 GLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
G +CD+C GY+GL GC+ C CS GSV ++C + G+C C PGV G +C
Sbjct: 936 GQQCDQCLSGYYGLDTGL-------GCVPCNCSVEGSVSDNCTE-EGQCHCGPGVSGKQC 987
Query: 122 NECLDPNKKLGPNGCMP 138
+ C GC P
Sbjct: 988 DRCSHGFYAFQDGGCTP 1004
Score = 191 (72.3 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 44/145 (30%), Positives = 67/145 (46%)
Query: 28 NAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
+ GC + C C T++ C + +C C GLKC+ CE YWGL P+ G
Sbjct: 999 DGGC-TPCDC---AHTQNNCDPASGECLCPPHTQGLKCEECEEAYWGLD------PE-QG 1047
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP-GMEVKPCN 146
C C CS GS C+ ++G C CK G G C++C + P+ C+P G +++
Sbjct: 1048 CQACNCSAVGSTSAQCDVLSGHCPCKKGFGGQSCHQCSLGYRSF-PD-CVPCGCDLR--G 1103
Query: 147 GEPPVINLQTGVELDCGSGANREDC 171
P +L+ G+ C + C
Sbjct: 1104 TLPDTCDLEQGL-CSCSEDSGTCSC 1127
Score = 184 (69.8 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 40/108 (37%), Positives = 52/108 (48%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC C C+ GS D C E+ QC C GV G +CDRC G+ YA GC
Sbjct: 954 GCVP-CNCSVEGSVSDNCTEEG-QCHCGPGVSGKQCDRCSHGF--------YAFQDGGCT 1003
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN-GC 136
C C+ + +C+ +G C+C P +G KC EC + L P GC
Sbjct: 1004 PCDCAH---TQNNCDPASGECLCPPHTQGLKCEECEEAYWGLDPEQGC 1048
Score = 176 (67.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 50/152 (32%), Positives = 71/152 (46%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE-------- 52
+GI ++C+D +Y P +K D+ C C C+ +GS CI+D
Sbjct: 376 TGINCETCIDQYYR--P-HKVSPY--DDHPC-RPCNCDPVGSLSSVCIKDDRHADLANGK 429
Query: 53 ---QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED-CEQMTG 108
QC C++G G KCDRC+ GY G P+ C+ C C GS+ ED C +
Sbjct: 430 WPGQCPCRKGYAGDKCDRCQFGYRGF-------PN---CIPCDCRTVGSLNEDPCIEP-- 477
Query: 109 RCVCKPGVKGSKCNECLDPN----KKLGPNGC 136
C+CK V+G C+ C P K+ P GC
Sbjct: 478 -CLCKKNVEGKNCDRC-KPGFYNLKERNPEGC 507
Score = 174 (66.3 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 44/141 (31%), Positives = 63/141 (44%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE---QCK-C 56
SG + + C +YG K D C TC + S C+ + + +C C
Sbjct: 1434 SGDHCELCASGYYG-----KVTGLPGDCTPC--TCPHHPPFSFSPTCVVEGDSDFRCNAC 1486
Query: 57 KQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGV 116
G G C+RC GY G + + C C C+ GSV DC++ +G+CVCKPG
Sbjct: 1487 LPGYEGQYCERCSAGYHGNPRAAG-----GSCQTCDCNPQGSVHSDCDRASGQCVCKPGA 1541
Query: 117 KGSKCNECLDPNKKLGPNGCM 137
G C +CL P L + C+
Sbjct: 1542 TGLHCEKCL-PRHILMESDCV 1561
Score = 164 (62.8 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 43/136 (31%), Positives = 62/136 (45%)
Query: 16 CPDNKTLAQGPD-NAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C + + G D GC + C C+ +GST C + C CK+G GG C +C GY
Sbjct: 1032 CEECEEAYWGLDPEQGCQA-CNCSAVGSTSAQCDVLSGHCPCKKGFGGQSCHQCSLGY-- 1088
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCE---------QMTGRCVCKPGVKGSKCNECL 125
S+ PD C+ CGC G++ + C+ + +G C CK V G +C++C
Sbjct: 1089 ----RSF-PD---CVPCGCDLRGTLPDTCDLEQGLCSCSEDSGTCSCKENVVGPQCSKCQ 1140
Query: 126 DPNKKL---GPNGCMP 138
L P GC P
Sbjct: 1141 AGTFALRGDNPQGCSP 1156
Score = 141 (54.7 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 43/127 (33%), Positives = 58/127 (45%)
Query: 12 WYGCCPDNKTLAQGP-DNA-----GCPST--CGCNKLGS-TEDACIEDTEQCKCKQGVGG 62
W G CP K A D G P+ C C +GS ED CIE C CK+ V G
Sbjct: 430 WPGQCPCRKGYAGDKCDRCQFGYRGFPNCIPCDCRTVGSLNEDPCIEP---CLCKKNVEG 486
Query: 63 LKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN 122
CDRC+PG++ L + + P+ GC +C C FG V C+ +T + G
Sbjct: 487 KNCDRCKPGFYNLKERN---PE--GCSECFC--FG-VSGVCDSLTWSISQVTNMSGWLVT 538
Query: 123 ECLDPNK 129
+ + NK
Sbjct: 539 DLMSTNK 545
Score = 135 (52.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 52/183 (28%), Positives = 71/183 (38%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDAC-IEDTEQCKCKQ- 58
+G + + CL +YG P T A CP + N T C + D E+ C Q
Sbjct: 772 TGDHCEQCLPGFYGT-PSRGTPGDCQPCA-CPLSIDSNNFSPT---CHLTDGEEVVCDQC 826
Query: 59 --GVGGLKCDRCEPGYWGLSKISSYAPDIDG--CLKCGCSQFGSVRE--DCEQMTGRCV- 111
G G C+RC GY+G P + G C+ C CS E C+ +TG C+
Sbjct: 827 APGYSGSWCERCADGYYG-------NPTVPGGTCVPCNCSGNVDPLEAGHCDSVTGECLK 879
Query: 112 CKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPC--NGE-PPVINLQTGVELDCGSGANR 168
C G+ C C D G C NG V +L+TG+ DC
Sbjct: 880 CLWNTDGAHCERCADGF--YGDAVTAKNCRACDCHENGSLSGVCHLETGL-CDCKPHVTG 936
Query: 169 EDC 171
+ C
Sbjct: 937 QQC 939
Score = 128 (50.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 46/147 (31%), Positives = 61/147 (41%)
Query: 46 ACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG-CLKCGCSQFGSVREDCE 104
A D E C+C QG G C+ C PGY+ + I G C C C S +C+
Sbjct: 708 AVAADVEHCECPQGYTGTSCEACLPGYYRVDGIL-----FGGICQPCECHGHAS---ECD 759
Query: 105 QMTGRC-VCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPC--------NGEPPVINLQ 155
+ G C VC G C +CL P P+ PG + +PC N P +L
Sbjct: 760 -IHGICSVCTHNTTGDHCEQCL-PGFYGTPSRGTPG-DCQPCACPLSIDSNNFSPTCHLT 816
Query: 156 TGVELDCG------SGANREDCPSDAY 176
G E+ C SG+ E C +D Y
Sbjct: 817 DGEEVVCDQCAPGYSGSWCERC-ADGY 842
>MGI|MGI:99913 [details] [associations]
symbol:Lamc2 "laminin, gamma 2" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=ISO] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005607 "laminin-2 complex" evidence=ISO]
[GO:0005610 "laminin-5 complex" evidence=IDA] [GO:0005615
"extracellular space" evidence=ISO] [GO:0005938 "cell cortex"
evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0008201
"heparin binding" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] MGI:MGI:99913 GO:GO:0008201 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052
SMART:SM00281 PROSITE:PS51115 HOGENOM:HOG000019301 GO:GO:0005610
eggNOG:NOG285700 HOVERGEN:HBG062127 OrthoDB:EOG4ZCT3N EMBL:U43327
IPI:IPI00117115 UniGene:Mm.329272 ProteinModelPortal:Q61092
SMR:Q61092 STRING:Q61092 PhosphoSite:Q61092 PRIDE:Q61092
UCSC:uc007czr.1 InParanoid:Q61092 PMAP-CutDB:Q61092
CleanEx:MM_LAMC2 Genevestigator:Q61092
GermOnline:ENSMUSG00000026479 Uniprot:Q61092
Length = 1191
Score = 193 (73.0 bits), Expect = 7.3e-14, P = 7.3e-14
Identities = 47/141 (33%), Positives = 65/141 (46%)
Query: 1 SGIYLKSCLDSWYG--CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQ 58
SG +C D+ G C + + D C C C+ GS C +++ QC+CK
Sbjct: 49 SGFRCLNCNDNTAGVHCERCREGFYRHRDRDRC-LPCNCHSKGSLSAGC-DNSGQCRCKP 106
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
GV G +CDRC+PG+ L+ KC C G + C+ +GRCVCKP V G
Sbjct: 107 GVTGQRCDRCQPGFHMLTDAGCTRDQGQLDSKCDCDPAG-ISGPCD--SGRCVCKPAVTG 163
Query: 119 SKCNECLDPNKKL---GPNGC 136
+C+ C L P GC
Sbjct: 164 ERCDRCRPGYYHLDRANPEGC 184
Score = 164 (62.8 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 47/166 (28%), Positives = 63/166 (37%)
Query: 12 WYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE---------QC-KCKQGVG 61
W CC L C CN G + C+ D E +C C
Sbjct: 5 WLSCCLGVALLLPAAQATSRREVCDCN--GKSRQ-CVFDQELHRQTGSGFRCLNCNDNTA 61
Query: 62 GLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
G+ C+RC G++ D D CL C C GS+ C+ +G+C CKPGV G +C
Sbjct: 62 GVHCERCREGFYRHR-------DRDRCLPCNCHSKGSLSAGCDN-SGQCRCKPGVTGQRC 113
Query: 122 NECLDPNKKLGPNGCM--PGMEVKPCNGEPPVINLQTGVELDCGSG 165
+ C L GC G C+ +P G+ C SG
Sbjct: 114 DRCQPGFHMLTDAGCTRDQGQLDSKCDCDP------AGISGPCDSG 153
Score = 153 (58.9 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 42/126 (33%), Positives = 58/126 (46%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKL--GSTEDACIEDTEQC-KCK 57
+G + C D ++G P + +GP C C CN + C + T +C KC
Sbjct: 489 TGARCELCADGFFGD-PFGE---RGPVRP-C-QRCQCNNNVDPNASGNCDQLTGRCLKCI 542
Query: 58 QGVGGLKCDRCEPGYWGLSKISSYAPD-IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGV 116
G+ CD+C+ GY+G AP+ D C C CS GS +C G CVCKPG
Sbjct: 543 YNTAGVYCDQCKAGYFG----DPLAPNPADKCRACNCSPMGSEPGECRG-DGSCVCKPGF 597
Query: 117 KGSKCN 122
G C+
Sbjct: 598 GGLNCD 603
Score = 125 (49.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 43/159 (27%), Positives = 65/159 (40%)
Query: 31 CPSTCG--CNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
CP G C+ + TE+ + C GV G +C+ C G++G P + C
Sbjct: 462 CPCHNGFSCSVMPETEEVVCNN-----CPPGVTGARCELCADGFFG-DPFGERGP-VRPC 514
Query: 89 LKCGCSQF--GSVREDCEQMTGRCV-CKPGVKGSKCNEC--------LDPNK--KLGPNG 135
+C C+ + +C+Q+TGRC+ C G C++C L PN K
Sbjct: 515 QRCQCNNNVDPNASGNCDQLTGRCLKCIYNTAGVYCDQCKAGYFGDPLAPNPADKCRACN 574
Query: 136 CMP-GMEVKPCNGEPPVINLQTGVELDCGSGANREDCPS 173
C P G E C G+ + L+C A CP+
Sbjct: 575 CSPMGSEPGECRGDGSCVCKPGFGGLNCDHAA-LTSCPA 612
Score = 116 (45.9 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 27 DNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
D S C C+ G + C D+ +C CK V G +CDRC PGY+ L + + P+
Sbjct: 131 DQGQLDSKCDCDPAGIS-GPC--DSGRCVCKPAVTGERCDRCRPGYYHLDRAN---PE-- 182
Query: 87 GCLKCGC 93
GC +C C
Sbjct: 183 GCTQCFC 189
Score = 80 (33.2 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 30/78 (38%), Positives = 34/78 (43%)
Query: 109 RCVCKPGVKGSKCNECLDPNKK----LGPNG-CMPGMEVKPCNGEPPVINLQTGVELDCG 163
RCVC G KG C EC K+ LGP G C+P C G + TG DC
Sbjct: 381 RCVCPAGYKGQFCQECASGYKRDSARLGPFGACVPCN----CQGGG-ACDPDTG---DCY 432
Query: 164 SG-ANRE----DCPSDAY 176
SG N + DCP Y
Sbjct: 433 SGDENPDIECADCPIGFY 450
>UNIPROTKB|O15230 [details] [associations]
symbol:LAMA5 "Laminin subunit alpha-5" species:9606 "Homo
sapiens" [GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001738
"morphogenesis of a polarized epithelium" evidence=IEA] [GO:0001755
"neural crest cell migration" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0007517 "muscle organ
development" evidence=IEA] [GO:0016331 "morphogenesis of embryonic
epithelium" evidence=IEA] [GO:0030324 "lung development"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IEA] [GO:0090002 "establishment of protein
localization to plasma membrane" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IC] [GO:0016477 "cell
migration" evidence=IDA] [GO:0030154 "cell differentiation"
evidence=NAS] [GO:0008283 "cell proliferation" evidence=NAS]
[GO:0005605 "basal lamina" evidence=NAS] [GO:0048041 "focal
adhesion assembly" evidence=NAS] [GO:0009790 "embryo development"
evidence=NAS] [GO:0045446 "endothelial cell differentiation"
evidence=NAS] [GO:0008037 "cell recognition" evidence=NAS]
[GO:0001525 "angiogenesis" evidence=NAS] [GO:0005178 "integrin
binding" evidence=IDA] [GO:0007229 "integrin-mediated signaling
pathway" evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=NAS] [GO:0043259 "laminin-10 complex" evidence=IDA;TAS]
[GO:0005615 "extracellular space" evidence=IDA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0005576 "extracellular
region" evidence=TAS] [GO:0031012 "extracellular matrix"
evidence=IDA] [GO:0043260 "laminin-11 complex" evidence=TAS]
[GO:0034446 "substrate adhesion-dependent cell spreading"
evidence=IDA] InterPro:IPR001368 InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0007010
GO:GO:0005615 GO:GO:0016477 GO:GO:0030155 GO:GO:0005198
GO:GO:0030324 GO:GO:0008283 GO:GO:0001755 GO:GO:0001525
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009790 GO:GO:0030334 GO:GO:0001942
GO:GO:0007517 GO:GO:0048041 GO:GO:0005178 PROSITE:PS01186
GO:GO:0007229 GO:GO:0042475 EMBL:AL354836 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384
GO:GO:0001738 GO:GO:0034446 GO:GO:0090002
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0016331
GO:GO:0001658 DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031
Pathway_Interaction_DB:syndecan_1_pathway GO:GO:0060445
Pfam:PF02210 GO:GO:0008037 DrugBank:DB00015 GO:GO:0045995
GO:GO:0045446 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240
EMBL:AF443072 EMBL:AB067494 EMBL:AB011105 EMBL:Z95636
IPI:IPI00783665 RefSeq:NP_005551.3 UniGene:Hs.473256
ProteinModelPortal:O15230 SMR:O15230 IntAct:O15230
MINT:MINT-1183475 STRING:O15230 PhosphoSite:O15230 PaxDb:O15230
PRIDE:O15230 DNASU:3911 Ensembl:ENST00000252999 GeneID:3911
KEGG:hsa:3911 UCSC:uc002ycq.3 CTD:3911 GeneCards:GC20M060883
H-InvDB:HIX0015978 HGNC:HGNC:6485 MIM:601033 neXtProt:NX_O15230
PharmGKB:PA30274 InParanoid:O15230 OMA:LRHTTGP OrthoDB:EOG4VHK5G
ChiTaRS:LAMA5 GenomeRNAi:3911 NextBio:15363 ArrayExpress:O15230
Bgee:O15230 CleanEx:HS_LAMA5 Genevestigator:O15230
GermOnline:ENSG00000130702 GO:GO:0043259 GO:GO:0043260
Uniprot:O15230
Length = 3695
Score = 196 (74.1 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 40/102 (39%), Positives = 53/102 (51%)
Query: 23 AQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYA 82
A G GC C C+ G +D C DT QC+C+ G G CDRC PGY+ +
Sbjct: 530 APGFYGPGC-QPCQCSSPGVADDRCDPDTGQCRCRVGFEGATCDRCAPGYF-------HF 581
Query: 83 PDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
P C CGCS G++ E C++ GRC+C+P G C+ C
Sbjct: 582 PL---CQLCGCSPAGTLPEGCDE-AGRCLCQPEFAGPHCDRC 619
Score = 184 (69.8 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 39/113 (34%), Positives = 54/113 (47%)
Query: 30 GCPSTCGCNKLGS---TEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
GC C C+ G T+ C D+ QCKC+ V G +CD C PG+ G +
Sbjct: 1524 GCEE-CNCSGPGIQELTDPTCDTDSGQCKCRPNVTGRRCDTCSPGFHGYPR--------- 1573
Query: 87 GCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKL---GPNGC 136
C C C + G+ C+ +TG+C CK V+G KC++C L P GC
Sbjct: 1574 -CRPCDCHEAGTAPGVCDPLTGQCYCKENVQGPKCDQCSLGTFSLDAANPKGC 1625
Score = 180 (68.4 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 47/143 (32%), Positives = 59/143 (41%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P A P N C + C C G+ +AC + C CK GV G +CDRC+ G++G
Sbjct: 2006 CAPGFYGNALLPGN--C-TRCDCTPCGT--EACDPHSGHCLCKAGVTGRRCDRCQEGHFG 2060
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN 134
GC C C E C +G+C C+PG G +C EC L
Sbjct: 2061 FDGCG-------GCRPCACGPAAEGSE-CHPQSGQCHCRPGTMGPQCRECAPGYWGLPEQ 2112
Query: 135 GCM----PGMEVKPCNGE---PP 150
GC PG P G PP
Sbjct: 2113 GCRRCQCPGGRCDPHTGRCNCPP 2135
Score = 176 (67.0 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 36/95 (37%), Positives = 49/95 (51%)
Query: 34 TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
+C L + A E C C+ V G CDRC+PG+WGLS + P+ GC +C C
Sbjct: 724 SCHPAGLAPVDPALPEAQVPCMCRAHVEGPSCDRCKPGFWGLSPSN---PE--GCTRCSC 778
Query: 94 SQFGSVR--EDCEQMTGRCVCKPGVKGSKCNECLD 126
G++ +C+ TG+C CKP V G C C D
Sbjct: 779 DLRGTLGGVAECQPGTGQCFCKPHVCGQACASCKD 813
Score = 175 (66.7 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 41/107 (38%), Positives = 52/107 (48%)
Query: 30 GC-PSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
GC P CG GS C + QC C+ G G +C C PGYWGL P+ GC
Sbjct: 2066 GCRPCACGPAAEGSE---CHPQSGQCHCRPGTMGPQCRECAPGYWGL-------PE-QGC 2114
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNG 135
+C C G R C+ TGRC C PG+ G +C+ C ++ P G
Sbjct: 2115 RRCQCP--GG-R--CDPHTGRCNCPPGLSGERCDTCSQQHQVPVPGG 2156
Score = 166 (63.5 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 39/118 (33%), Positives = 55/118 (46%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKC 65
C ++G P N P+ GC + C C+ G+ C T QC CK V G C
Sbjct: 758 CKPGFWGLSPSN------PE--GC-TRCSCDLRGTLGGVAECQPGTGQCFCKPHVCGQAC 808
Query: 66 DRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
C+ G++GL + D GC C C G++ + CE TG C C+P +G C+E
Sbjct: 809 ASCKDGFFGLDQA-----DYFGCRSCRCDIGGALGQSCEPRTGVCRCRPNTQGPTCSE 861
Score = 156 (60.0 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 35/104 (33%), Positives = 50/104 (48%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
CGC+ G+ + C ++ +C C+ G CDRC PGY G P+ C C C
Sbjct: 587 CGCSPAGTLPEGC-DEAGRCLCQPEFAGPHCDRCRPGYHGF-------PN---CQACTCD 635
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP 138
G++ + C G C C+PG G+ C EC P P+ C+P
Sbjct: 636 PRGALDQLCGA-GGLCRCRPGYTGTACQEC-SPGFHGFPS-CVP 676
Score = 155 (59.6 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 46/154 (29%), Positives = 65/154 (42%)
Query: 26 PDNAGCPS--TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAP 83
P G P+ C C+ G+ + C C+C+ G G C C PG+ G P
Sbjct: 621 PGYHGFPNCQACTCDPRGALDQLCGAGG-LCRCRPGYTGTACQECSPGFHGF-------P 672
Query: 84 DIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVK 143
C+ C CS GS+ C+ +G+C C+P V G +C+ C+ P P C G
Sbjct: 673 S---CVPCHCSAEGSLHAACDPRSGQCSCRPRVTGLRCDTCV-PGAYNFPY-CEAG-SCH 726
Query: 144 PCNGEPPVINLQTGVELDCGSGANREDCPSDAYC 177
P G PV ++ C A+ E PS C
Sbjct: 727 PA-GLAPVDPALPEAQVPCMCRAHVEG-PSCDRC 758
Score = 139 (54.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 31/90 (34%), Positives = 42/90 (46%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
CGC+++G+T C QC C V G C RC GYWG P+ C C C
Sbjct: 1438 CGCHEVGATGPTCEPFGGQCPCHAHVIGRDCSRCATGYWGF-------PN---CRPCDC- 1486
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
G+ C+++TG+C+C P C C
Sbjct: 1487 --GA--RLCDELTGQCICPPRTIPPDCLLC 1512
Score = 136 (52.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 48/181 (26%), Positives = 66/181 (36%)
Query: 15 CCPDNKTLAQGPDNAGCPSTC-GCNKLGSTEDA-------------CIEDTEQ----C-K 55
CCP P A + C CN G D ++ T Q C
Sbjct: 336 CCPGFNQQPWKPATANSANECQSCNCYGHATDCYYDPEVDRRRASQSLDGTYQGGGVCID 395
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC-SQFGSVREDCEQMTGRCVCKP 114
C+ G+ C+RC PG++ +P + C +C C S F CE +TGRC C+P
Sbjct: 396 CQHHTTGVNCERCLPGFYRSPNHPLDSPHV--CRRCNCESDFTD--GTCEDLTGRCYCRP 451
Query: 115 GVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGS-GANREDCPS 173
G +C+ C + G C P E V+ V DC + G C
Sbjct: 452 NFSGERCDVCAEGFT--GFPSCYPTPSSSNDTREQ-VLPAGQIVNCDCSAAGTQGNACRK 508
Query: 174 D 174
D
Sbjct: 509 D 509
Score = 133 (51.9 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 44/150 (29%), Positives = 61/150 (40%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
+G+ + CL +Y P N L D+ C C T+ C + T +C C+
Sbjct: 401 TGVNCERCLPGFYRS-P-NHPL----DSPHVCRRCNCES-DFTDGTCEDLTGRCYCRPNF 453
Query: 61 GGLKCDRCEPGYWGLSKI----SSYAPDIDGCL------KCGCSQFGSVREDCEQ--MTG 108
G +CD C G+ G SS + L C CS G+ C + G
Sbjct: 454 SGERCDVCAEGFTGFPSCYPTPSSSNDTREQVLPAGQIVNCDCSAAGTQGNACRKDPRVG 513
Query: 109 RCVCKPGVKGSKCNECLDPNKKLGPNGCMP 138
RC+CKP +G+ C C P GP GC P
Sbjct: 514 RCLCKPNFQGTHCELCA-PGF-YGP-GCQP 540
Score = 132 (51.5 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 45/153 (29%), Positives = 64/153 (41%)
Query: 10 DSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCDRC 68
DS C P +G C C C+ G + D C+ + C C+ G C+RC
Sbjct: 1840 DSCQECAPGFYRDVKGLFLGRCVP-CQCH--GHS-DRCLPGSGVCVDCQHNTEGAHCERC 1895
Query: 69 EPGYWGLSKISSYAPDIDGCLKCGCS---QFGSVREDCEQMTGR--CVCKPGVKGSKCNE 123
+ G+ S+ AP C+ C C + E C GR C+CKPG G+ C
Sbjct: 1896 QAGFVS-SRDDPSAP----CVSCPCPLSVPSNNFAEGCVLRGGRTQCLCKPGYAGASCER 1950
Query: 124 CLDPNKKLGPNGCMPGMEVKPC----NGEPPVI 152
C P G N + G +PC NG+P ++
Sbjct: 1951 CA-PGF-FG-NPLVLGSSCQPCDCSGNGDPNLL 1980
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 36/126 (28%), Positives = 47/126 (37%)
Query: 31 CPSTCGCNKLGSTEDACI--EDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
CP + N + C+ QC CK G G C+RC PG++G + C
Sbjct: 1915 CPLSVPSNNFA---EGCVLRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLG-----SSC 1966
Query: 89 LKCGCSQFGSVR---EDCEQMTGRCV-CKPGVKGSKCNECLDP--NKKLGPNGCMPGMEV 142
C CS G DC+ +TG C C G +C C L P C +
Sbjct: 1967 QPCDCSGNGDPNLLFSDCDPLTGACRGCLRHTTGPRCEICAPGFYGNALLPGNCTR-CDC 2025
Query: 143 KPCNGE 148
PC E
Sbjct: 2026 TPCGTE 2031
>ZFIN|ZDB-GENE-060119-1 [details] [associations]
symbol:lama2 "laminin, alpha 2" species:7955 "Danio
rerio" [GO:0030155 "regulation of cell adhesion" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0060538 "skeletal muscle organ
development" evidence=IMP] [GO:0016203 "muscle attachment"
evidence=IGI;IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 ZFIN:ZDB-GENE-060119-1 GO:GO:0030155
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016203 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
EMBL:JN786913 Uniprot:G8IHT9
Length = 3124
Score = 193 (73.0 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 53/164 (32%), Positives = 76/164 (46%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC C CN GS C +++ QC+C+ GV G KCDRC G++ + GC
Sbjct: 947 GCVP-CHCNSFGSKSFDC-DESGQCRCQPGVTGQKCDRCAAGHFSFQE--------GGCT 996
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN---GCMPGMEVKPCN 146
C C+ G+ +C+ TG+C+C P G +C++C PN G + GC P CN
Sbjct: 997 PCQCAHVGN---NCDASTGQCICPPNTVGERCDKCA-PNH-WGHDISTGCKPC----GCN 1047
Query: 147 GEPPVI---NLQTGVELDCGSGANREDCPSDAYCHIT-QNFARC 186
V NL TG + C E C C + ++F +C
Sbjct: 1048 ALGSVAQQCNLNTGCCM-CREQFRGEKCDE---CKLGYRDFPQC 1087
Score = 185 (70.2 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 40/114 (35%), Positives = 57/114 (50%)
Query: 26 PDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPD 84
P + P C N + +C T C +C++G GG C+RC GY+G + I+
Sbjct: 843 PGGSCQPCVCSGNLDQTAPLSCDPLTGACLRCRKGYGGADCERCADGYFGDALIAK---- 898
Query: 85 IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP 138
C C C GSV E C Q TG+C C+ V G +C+EC+ + G GC+P
Sbjct: 899 --NCQACQCHSNGSVSELCHQETGQCQCRQHVIGRQCDECMAGSHLQGALGCVP 950
Score = 170 (64.9 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 45/135 (33%), Positives = 59/135 (43%)
Query: 15 CCPDNKTLAQGPD-NAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C P++ G D + GC CGCN LGS C +T C C++ G KCD C+ GY
Sbjct: 1028 CAPNH----WGHDISTGC-KPCGCNALGSVAQQCNLNTGCCMCREQFRGEKCDECKLGY- 1081
Query: 74 GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQ---------MTGRCVCKPGVKGSKCNEC 124
D C+ C CS GS + C+ +G+C CK V+G KC C
Sbjct: 1082 ---------RDFPQCISCQCSAAGSSLDTCDSESGLCACADRSGQCSCKANVEGQKCERC 1132
Query: 125 LDPNKKLG---PNGC 136
+ L P GC
Sbjct: 1133 KSGSFGLSHRNPLGC 1147
Score = 156 (60.0 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 50/157 (31%), Positives = 68/157 (43%)
Query: 2 GIYLKSCLDSWYGCCPDNKT-LAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ------- 53
GI +SC+D +Y P + L P C + C C+ G+ C+ D Q
Sbjct: 372 GINCQSCIDGFYR--PSGVSPLEPWP----C-TPCTCDLRGALHSTCVPDESQATTDLPV 424
Query: 54 --CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED-CEQMTGRC 110
C CK G G +CDRC GY G + C +C CS GSV +D C+ C
Sbjct: 425 GSCICKPGYAGERCDRCVFGYAGFPQ----------CERCRCSSDGSVNQDPCQPP---C 471
Query: 111 VCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNG 147
VCK V+G C+ C L G + G + C+G
Sbjct: 472 VCKEHVEGRDCDRCKQGFYHLS-GGRVRGCDKCYCSG 507
Score = 154 (59.3 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 35/112 (31%), Positives = 53/112 (47%)
Query: 26 PDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
P+N P+ C G E C C +G G C+RC PG+ G P +
Sbjct: 1453 PENNFSPT---CQTEGFNEYRCTA------CPEGYEGKHCERCAPGFHG-------DPGV 1496
Query: 86 DG--CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNG 135
G C +C C +G+ C+ +G+C C+PG G KC++C++ + GP G
Sbjct: 1497 LGGRCEECKCDPYGAFPSACDSHSGQCQCRPGASGLKCDQCMERHV-CGPEG 1547
Score = 135 (52.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 56/177 (31%), Positives = 73/177 (41%)
Query: 19 NKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCK-CKQGVGGLKCDRCEPGYWGLSK 77
N T+ QG C C C+ G TE C + T C C+ G C +C PGY+G
Sbjct: 731 NGTIYQGV----C-ELCQCH--GHTE-RCDDLTGHCLGCRDHTVGPNCGQCAPGYYG--- 779
Query: 78 ISSYAPDIDGCLKCGC---SQFGSVREDCEQMTGR----CV-CKPGVKGSKCNECLDPNK 129
+ D C C C S + C ++ GR C C PG GS+C+ C N
Sbjct: 780 -DATRGTADDCQPCACPLLSPANNFSPTC-RVDGRGEVICDRCPPGYTGSRCDRC--SNG 835
Query: 130 KLG-PNGCMPGMEVKPC--NGE-----PPVINLQTGVELDCGSGANREDCP--SDAY 176
G PN +PG +PC +G P + TG L C G DC +D Y
Sbjct: 836 YFGRPN--IPGGSCQPCVCSGNLDQTAPLSCDPLTGACLRCRKGYGGADCERCADGY 890
Score = 133 (51.9 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 39/152 (25%), Positives = 63/152 (41%)
Query: 42 STEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG---CLKCGCSQFGS 98
S + E+C C QG GL C+ C G++ LS ++ + G C++C C+
Sbjct: 1345 SQDSEIAHQIEKCVCPQGYAGLSCEECAAGFYRLSVLAGGSASRAGFGSCVRCQCNGHS- 1403
Query: 99 VREDCEQMTGRCV-CKPGVKGSKCNECLDPNKKLGPNGCMPGM--EVKPCNGEPPVINLQ 155
+ C+ T C C+ G KC C G G + G + KPC P++N +
Sbjct: 1404 --DSCDPETSICQNCQHNTVGDKCERCA-----AGFYGVVRGFTDDCKPC--ACPLLNPE 1454
Query: 156 TGVELDCGS-GANREDCPSDAYCHITQNFARC 186
C + G N C + + ++ RC
Sbjct: 1455 NNFSPTCQTEGFNEYRCTACPEGYEGKHCERC 1486
Score = 126 (49.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 37/127 (29%), Positives = 51/127 (40%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCD 66
C +YG + A CP N T C +C G G +CD
Sbjct: 773 CAPGYYGDA--TRGTADDCQPCACPLLSPANNFSPTCRVDGRGEVICDRCPPGYTGSRCD 830
Query: 67 RCEPGYWGLSKISSYAPDIDG--CLKCGCSQFGSVRE----DCEQMTGRCV-CKPGVKGS 119
RC GY+G P+I G C C CS G++ + C+ +TG C+ C+ G G+
Sbjct: 831 RCSNGYFG-------RPNIPGGSCQPCVCS--GNLDQTAPLSCDPLTGACLRCRKGYGGA 881
Query: 120 KCNECLD 126
C C D
Sbjct: 882 DCERCAD 888
Score = 125 (49.1 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 38/145 (26%), Positives = 54/145 (37%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDC----EQMT---- 107
C + GG+ C C G++ S +S P C C C G++ C Q T
Sbjct: 366 CSENTGGINCQSCIDGFYRPSGVSPLEPW--PCTPCTCDLRGALHSTCVPDESQATTDLP 423
Query: 108 -GRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGA 166
G C+CKPG G +C+ C+ G G P E C+ + V C
Sbjct: 424 VGSCICKPGYAGERCDRCV-----FGYAG-FPQCERCRCSSDGSVNQDPCQPPCVCKEHV 477
Query: 167 NREDCP--SDAYCHITQNFARCCRK 189
DC + H++ R C K
Sbjct: 478 EGRDCDRCKQGFYHLSGGRVRGCDK 502
Score = 119 (46.9 bits), Expect = 0.00043, P = 0.00043
Identities = 51/193 (26%), Positives = 74/193 (38%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGP-DNAGCPSTCGCNKLGSTEDACIEDTEQCK-CKQ 58
+G+ + C +Y LA G AG S C G + D+C +T C+ C+
Sbjct: 1364 AGLSCEECAAGFYRL----SVLAGGSASRAGFGSCVRCQCNGHS-DSCDPETSICQNCQH 1418
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFG---SVREDCEQMTG----RCV 111
G KC+RC G++G+ + + D C C C + C Q G RC
Sbjct: 1419 NTVGDKCERCAAGFYGV--VRGFTDD---CKPCACPLLNPENNFSPTC-QTEGFNEYRCT 1472
Query: 112 -CKPGVKGSKCNECLDPNKKLGPNGCMPGM--EVK--PCNGEPPVINLQTGVELDCGSGA 166
C G +G C C P G G + G E K P P + +G + C GA
Sbjct: 1473 ACPEGYEGKHCERCA-PGFH-GDPGVLGGRCEECKCDPYGAFPSACDSHSG-QCQCRPGA 1529
Query: 167 NREDCPSDAYCHI 179
+ C H+
Sbjct: 1530 SGLKCDQCMERHV 1542
Score = 106 (42.4 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 28/74 (37%), Positives = 36/74 (48%)
Query: 29 AGCPST--CGCNKLGST-EDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
AG P C C+ GS +D C C CK+ V G CDRC+ G++ LS +
Sbjct: 446 AGFPQCERCRCSSDGSVNQDPC---QPPCVCKEHVEGRDCDRCKQGFYHLS-----GGRV 497
Query: 86 DGCLKCGCSQFGSV 99
GC KC CS S+
Sbjct: 498 RGCDKCYCSGVASL 511
Score = 67 (28.6 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 24/84 (28%), Positives = 35/84 (41%)
Query: 110 CVCKPGVKGSKCNECLDPNKKLGPNGCM-PGM-EVKPCNGEPPVINLQTGVELDCGS--- 164
C C PG G+ C C +++ NG + G+ E+ C+G + TG L C
Sbjct: 709 CQCPPGYDGTSCEMCALGYRRV--NGTIYQGVCELCQCHGHTERCDDLTGHCLGCRDHTV 766
Query: 165 GANREDCPSDAYCHITQNFARCCR 188
G N C Y T+ A C+
Sbjct: 767 GPNCGQCAPGYYGDATRGTADDCQ 790
>UNIPROTKB|F1LRH4 [details] [associations]
symbol:Lamc2 "Protein Lamc2" species:10116 "Rattus
norvegicus" [GO:0005610 "laminin-5 complex" evidence=IEA]
[GO:0008201 "heparin binding" evidence=IEA] RGD:621053
GO:GO:0008201 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052 SMART:SM00281
PROSITE:PS51115 GeneTree:ENSGT00690000102103 GO:GO:0005610 CTD:3918
KO:K06246 OMA:DRCLPCN IPI:IPI00393413 RefSeq:NP_001094110.1
UniGene:Rn.9278 ProteinModelPortal:F1LRH4
Ensembl:ENSRNOT00000036947 GeneID:192362 KEGG:rno:192362
NextBio:623057 ArrayExpress:F1LRH4 Uniprot:F1LRH4
Length = 1192
Score = 187 (70.9 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 39/105 (37%), Positives = 53/105 (50%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ GS C +++ QC+CK GV G +CDRC+PG+ L+ KC C
Sbjct: 84 CNCHSKGSLGAGC-DNSGQCRCKPGVVGQRCDRCQPGFHMLTDAGCTRDQRQLDSKCDCD 142
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKL---GPNGC 136
G + C+ +GRCVCKP V G +C+ C L P GC
Sbjct: 143 PAG-ISGPCD--SGRCVCKPAVTGERCDRCRAGYYHLDRANPEGC 184
Score = 159 (61.0 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 46/166 (27%), Positives = 62/166 (37%)
Query: 12 WYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE---------QC-KCKQGVG 61
W CC L C CN G + C+ D E +C C
Sbjct: 5 WLSCCLGVALLLPAAQATSRREVCDCN--GKSRQ-CVFDQELHRQTGNGFRCLNCNDNTA 61
Query: 62 GLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
G+ C+RC G++ D D CL C C GS+ C+ +G+C CKPGV G +C
Sbjct: 62 GVHCERCREGFYRQR-------DRDRCLPCNCHSKGSLGAGCDN-SGQCRCKPGVVGQRC 113
Query: 122 NECLDPNKKLGPNGCMPGMEV--KPCNGEPPVINLQTGVELDCGSG 165
+ C L GC C+ +P G+ C SG
Sbjct: 114 DRCQPGFHMLTDAGCTRDQRQLDSKCDCDP------AGISGPCDSG 153
Score = 154 (59.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 42/125 (33%), Positives = 57/125 (45%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKL--GSTEDACIEDTEQC-KCK 57
+G + C D ++G P + +GP C C CN S C + T +C KC
Sbjct: 489 TGARCELCADGFFGD-PFGE---RGPVRP-C-QRCQCNNNVDPSASGNCDQLTGRCLKCI 542
Query: 58 QGVGGLKCDRCEPGYWGLSKISSYAPD-IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGV 116
G+ CD+C+ GY+G AP+ D C C C+ GS +C G CVCKPG
Sbjct: 543 YNTAGIYCDQCKAGYFG----DPLAPNPADKCRACNCNPVGSEPGECRS-DGSCVCKPGF 597
Query: 117 KGSKC 121
G C
Sbjct: 598 GGLNC 602
Score = 129 (50.5 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 43/159 (27%), Positives = 64/159 (40%)
Query: 31 CPSTCG--CNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
CP G C+ + TE+ + C GV G +C+ C G++G P + C
Sbjct: 462 CPCHNGFSCSVMPETEEVVCNN-----CPPGVTGARCELCADGFFG-DPFGERGP-VRPC 514
Query: 89 LKCGCSQF--GSVREDCEQMTGRCV-CKPGVKGSKCNEC--------LDPNK--KLGPNG 135
+C C+ S +C+Q+TGRC+ C G C++C L PN K
Sbjct: 515 QRCQCNNNVDPSASGNCDQLTGRCLKCIYNTAGIYCDQCKAGYFGDPLAPNPADKCRACN 574
Query: 136 CMP-GMEVKPCNGEPPVINLQTGVELDCGSGANREDCPS 173
C P G E C + + L+C A CP+
Sbjct: 575 CNPVGSEPGECRSDGSCVCKPGFGGLNCAHAAALTSCPA 613
Score = 107 (42.7 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 27 DNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
D S C C+ G + C D+ +C CK V G +CDRC GY+ L + + P+
Sbjct: 131 DQRQLDSKCDCDPAGIS-GPC--DSGRCVCKPAVTGERCDRCRAGYYHLDRAN---PE-- 182
Query: 87 GCLKCGC 93
GC +C C
Sbjct: 183 GCTQCFC 189
Score = 80 (33.2 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 30/78 (38%), Positives = 34/78 (43%)
Query: 109 RCVCKPGVKGSKCNECLDPNKK----LGPNG-CMPGMEVKPCNGEPPVINLQTGVELDCG 163
RCVC G KG C EC K+ LGP G C+P C G + TG DC
Sbjct: 381 RCVCPAGYKGQFCQECASGYKRDSARLGPFGTCVPCN----CQGGG-ACDPDTG---DCY 432
Query: 164 SG-ANRE----DCPSDAY 176
SG N + DCP Y
Sbjct: 433 SGDENPDIECADCPIGFY 450
>UNIPROTKB|F1LU77 [details] [associations]
symbol:F1LU77 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 GO:GO:0005610 IPI:IPI00768265
Ensembl:ENSRNOT00000015750 ArrayExpress:F1LU77 Uniprot:F1LU77
Length = 3149
Score = 190 (71.9 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 40/114 (35%), Positives = 61/114 (53%)
Query: 29 AGCPSTCGCNKLGSTEDA---CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
AGC C C++ G+ E A C D+ QC+CK V G +CD+C PG++ + P+
Sbjct: 1255 AGC-EVCNCSRKGTVEAAVSECDRDSGQCRCKPRVTGQQCDKCAPGFY-------HFPE- 1305
Query: 86 DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKL---GPNGC 136
C+ C C++ G+ C+ TG C+CK V+G +C C + + L P GC
Sbjct: 1306 --CVPCSCNRDGTEPGVCDPGTGACMCKENVEGPQCQFCREGSFYLDSANPEGC 1357
Score = 185 (70.2 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 47/133 (35%), Positives = 62/133 (46%)
Query: 1 SGIYLKSCLDSWYG---CC-----PDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE 52
SG + ++C D +Y C PD + P AG C CN G + C +D
Sbjct: 353 SGDFCETCADGYYNFPFCLRIPVFPDYTLNPEDP-MAGNIKGCDCNLEGVLPEIC-DDRG 410
Query: 53 QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVC 112
+C C+ GV G +CD C G SY+ I C C CS GS C+ TG+C C
Sbjct: 411 RCLCRPGVEGPRCDSCRSG--------SYSFPI--CQACQCSTSGSYPVPCDPETGQCEC 460
Query: 113 KPGVKGSKCNECL 125
PGV G +C+ CL
Sbjct: 461 LPGVTGRRCDRCL 473
Score = 150 (57.9 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 32/94 (34%), Positives = 46/94 (48%)
Query: 30 GCPSTCGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
GC S C C++ G+ C ++ C CK V G CD C GY+ L K S+Y G
Sbjct: 530 GC-SECQCHEAGTVSGIGECGQEDGDCSCKAHVTGDACDTCADGYFSLEK-SNYF----G 583
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
C C C G++ C +G C C+ ++G +C
Sbjct: 584 CQGCQCDIGGALTTMCSGPSGECQCREHIEGKQC 617
Score = 150 (57.9 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 54/181 (29%), Positives = 73/181 (40%)
Query: 10 DSWYGCCPDN-KTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCDR 67
DS GC P + + P AG C CN G + + C + + C C+ G C+R
Sbjct: 1567 DSCQGCRPGYYRDIKSFP--AGRCVPCNCN--GHS-NRCQDGSGVCINCQHNTAGEHCER 1621
Query: 68 CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTG--RCVCKPGVKGSKCNECL 125
C+ GY+G S I C C C S C G RC CKPG G++C C
Sbjct: 1622 CQEGYYG-SAIHG------SCRVCPCPHTNSFATGCAVDGGAVRCACKPGYTGAQCERCA 1674
Query: 126 DPNKKLGPNGCMPGMEVKPCN----GEPPVINLQTG--VELDCGSGANREDCPSDAYCHI 179
P P G +PCN G+ + TG V + G+ E+C C +
Sbjct: 1675 -PGYFGNPQKF--GGSCQPCNCNSNGQFGTCDPLTGDCVSQEPKDGSPAEECDDCDSCVM 1731
Query: 180 T 180
T
Sbjct: 1732 T 1732
Score = 142 (55.0 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 50/165 (30%), Positives = 75/165 (45%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLS---KISSYAPD-- 84
GC C C+ D C + + +C CK G C+ C GY+ +I + PD
Sbjct: 325 GC-IPCSCDP--DRADECDQGSGRCHCKPNFSGDFCETCADGYYNFPFCLRIPVF-PDYT 380
Query: 85 ------IDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCM 137
+ G +K C C+ G + E C+ GRC+C+PGV+G +C+ C + G
Sbjct: 381 LNPEDPMAGNIKGCDCNLEGVLPEICDDR-GRCLCRPGVEGPRCDSC-----RSGSYS-F 433
Query: 138 PGMEVKPCN--GEPPV-INLQTGVELDC--GSGANRED-CPSDAY 176
P + C+ G PV + +TG + +C G R D C S AY
Sbjct: 434 PICQACQCSTSGSYPVPCDPETG-QCECLPGVTGRRCDRCLSGAY 477
Score = 134 (52.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 34/96 (35%), Positives = 47/96 (48%)
Query: 33 STCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
S+ C+ G T D+ + C+CK V C C+P YW L+K + P GC +C
Sbjct: 485 SSSVCDPAG-TMDSSLG---YCQCKLHVTSPTCSVCKPLYWDLAKEN---PR--GCSECQ 535
Query: 93 CSQFGSVRE--DCEQMTGRCVCKPGVKGSKCNECLD 126
C + G+V +C Q G C CK V G C+ C D
Sbjct: 536 CHEAGTVSGIGECGQEDGDCSCKAHVTGDACDTCAD 571
Score = 133 (51.9 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
C+ G+ C++C GY+ + A + GC+ C C + ++C+Q +GRC CKP
Sbjct: 296 CQHNTAGVNCEKCAKGYFRPHGVPVEA--LHGCIPCSCDPDRA--DECDQGSGRCHCKPN 351
Query: 116 VKGSKCNECLD 126
G C C D
Sbjct: 352 FSGDFCETCAD 362
Score = 132 (51.5 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 50/169 (29%), Positives = 73/169 (43%)
Query: 14 GCCPDNKTLAQGPDNA-----GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRC 68
G P T ++G +A G P CN G C E T +C C +C+ C
Sbjct: 1188 GGAPAGPTSSEGSAHAVQQYYGFPHCKPCN-CGRR--LCEEVTGKCLCPPNTVRPQCEVC 1244
Query: 69 EPGYWGLSKISSYAPDIDGCLKCGCSQFGSVR---EDCEQMTGRCVCKPGVKGSKCNECL 125
E + ++ P + GC C CS+ G+V +C++ +G+C CKP V G +C++C
Sbjct: 1245 EMNSF------NFHP-VAGCEVCNCSRKGTVEAAVSECDRDSGQCRCKPRVTGQQCDKCA 1297
Query: 126 DPNKKLGPNGCMPGMEVKPCN--G-EPPVINLQTGVELDCGSGANREDC 171
P P C+P CN G EP V + TG + C C
Sbjct: 1298 -PGFYHFPE-CVPCS----CNRDGTEPGVCDPGTGACM-CKENVEGPQC 1339
>UNIPROTKB|F1MDD5 [details] [associations]
symbol:Bt.12589 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005610 "laminin-5 complex" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:DSCQGCS GO:GO:0005610 EMBL:DAAA02056591
EMBL:DAAA02056592 EMBL:DAAA02056593 EMBL:DAAA02056594
EMBL:DAAA02056595 EMBL:DAAA02056596 EMBL:DAAA02056597
EMBL:DAAA02056598 EMBL:DAAA02056599 EMBL:DAAA02056600
EMBL:DAAA02056601 EMBL:DAAA02056602 IPI:IPI00686590
Ensembl:ENSBTAT00000060991 ArrayExpress:F1MDD5 Uniprot:F1MDD5
Length = 3242
Score = 190 (71.9 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 41/114 (35%), Positives = 60/114 (52%)
Query: 29 AGCPSTCGCNKLGS---TEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
AGC C C++ G+ T C D QC+C+ + G +CDRC PG++ P+
Sbjct: 1255 AGCEG-CNCSRTGTDGTTTPECDGDHGQCRCRPRITGRQCDRCAPGFYRF-------PE- 1305
Query: 86 DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKL---GPNGC 136
CL C CS+ G+ C+ TG C+CK V+G++CN C + + L P GC
Sbjct: 1306 --CLPCHCSRDGTEPGVCDPGTGACLCKENVQGTECNMCREGSFYLDPANPKGC 1357
Score = 187 (70.9 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 36/92 (39%), Positives = 50/92 (54%)
Query: 35 CGCNKLGSTEDACIEDTE-QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C CN G + C D + +C C+ GVGG +CD C PG+ Y+ I C C C
Sbjct: 395 CDCNLEGVLPEIC--DAQGRCLCRPGVGGAQCDACRPGF--------YSFPI--CQACQC 442
Query: 94 SQFGSVREDCEQMTGRCVCKPGVKGSKCNECL 125
S GS + C +TG+C C+PG+ G +C+ CL
Sbjct: 443 SALGSYQTPCSPVTGQCECQPGITGQRCDRCL 474
Score = 170 (64.9 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 39/124 (31%), Positives = 57/124 (45%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
C+ G+ C++C GY+ I +APD GC+ C C + EDCEQ +GRC C+P
Sbjct: 296 CQHNTAGVNCEKCAKGYYRPYGIPVHAPD--GCIPCSCHPEHA--EDCEQGSGRCTCRPN 351
Query: 116 VKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVI-NLQTGVELDCG-SGANREDCPS 173
+G C EC +P + + + E PV ++ G DC G E C +
Sbjct: 352 FRGDHCEECAAGYYHFPVCSRIPILPISTPSPEDPVAGDIIKGC--DCNLEGVLPEICDA 409
Query: 174 DAYC 177
C
Sbjct: 410 QGRC 413
Score = 159 (61.0 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 42/110 (38%), Positives = 51/110 (46%)
Query: 15 CCPDNKTLA-QGPDNAGCPSTCGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPG 71
C P LA + PD GC S C C+ G+ C + C CK VGG CD CE G
Sbjct: 517 CKPLYWNLAKENPD--GC-SECRCHVAGTMSGIGECGQLDGDCHCKSHVGGDSCDTCEDG 573
Query: 72 YWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
Y+ L K S+Y GC C C G+V C +G C C+ V G C
Sbjct: 574 YFALEK-SNYF----GCQGCQCDIGGAVTPVCSGRSGVCQCREHVVGKAC 618
Score = 147 (56.8 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 45/145 (31%), Positives = 65/145 (44%)
Query: 19 NKTLAQGPDNAGCPSTCG-CNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSK 77
++ L+ D C + C+ G T D+ + C+CK V C C+P YW L+K
Sbjct: 471 DRCLSGASDFPHCQGSSNVCDPAG-TVDSSLG---HCQCKLHVESPSCSICKPLYWNLAK 526
Query: 78 ISSYAPDIDGCLKCGCSQFGSVRE--DCEQMTGRCVCKPGVKGSKCNEC------LDPNK 129
+ PD GC +C C G++ +C Q+ G C CK V G C+ C L+ +
Sbjct: 527 EN---PD--GCSECRCHVAGTMSGIGECGQLDGDCHCKSHVGGDSCDTCEDGYFALEKSN 581
Query: 130 KLGPNGCMP--GMEVKP-CNGEPPV 151
G GC G V P C+G V
Sbjct: 582 YFGCQGCQCDIGGAVTPVCSGRSGV 606
Score = 140 (54.3 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 45/162 (27%), Positives = 65/162 (40%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ G+T C + QC C+ V G +C RC+ G++G P C C C
Sbjct: 1170 CECHPAGATGHPCSPEGGQCPCRPHVIGRQCTRCQTGFYGF-------PH---CKPCSCG 1219
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC----LDPNKKLGPNGC------MPGMEVKP 144
R CE+ TGRC+C P +C+ C + G GC G
Sbjct: 1220 -----RRLCEETTGRCLCPPLTVRPQCDVCEVHSFSFHPLAGCEGCNCSRTGTDGTTTPE 1274
Query: 145 CNGEPPVINLQ---TGVELD-CGSGANREDCPSDAYCHITQN 182
C+G+ + TG + D C G R P CH +++
Sbjct: 1275 CDGDHGQCRCRPRITGRQCDRCAPGFYR--FPECLPCHCSRD 1314
Score = 139 (54.0 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 56/184 (30%), Positives = 75/184 (40%)
Query: 10 DSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQGV---GGLKC 65
DS GC P +G C C CN G + + C + + C +C G+ GG C
Sbjct: 1567 DSCQGCSPGYYRENKGLYTGWCVP-CNCN--GHS-NRCQDGSGICIECSSGMTIRGGEHC 1622
Query: 66 DRCEPG-YWGLSKISSYAPDIDG-CLKCGCSQFGSVREDCEQMTG---RCVCKPGVKGSK 120
+RC+ G YW I G C C C S C +TG +C CKPG G++
Sbjct: 1623 ERCKEGSYWNT---------IHGSCRVCPCPHSDSFATGCV-VTGENVKCSCKPGYTGTR 1672
Query: 121 CNECL-----DPNKKLG---PNGCMPGMEVKPC---NGEPPVINLQTGVELDCGSGANRE 169
C C +P K G P C ++ C NG+ IN + D G G +
Sbjct: 1673 CERCAPGYFGNPQKFGGSCQPCNCNSNGQLGSCDPLNGD--CINQEPK---DSGPGEECD 1727
Query: 170 DCPS 173
DC S
Sbjct: 1728 DCDS 1731
Score = 138 (53.6 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 41/136 (30%), Positives = 67/136 (49%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
+G+ + C +Y P + PD GC C C+ ED C + + +C C+
Sbjct: 301 AGVNCEKCAKGYYR--PYGIPV-HAPD--GC-IPCSCHP-EHAED-CEQGSGRCTCRPNF 352
Query: 61 GGLKCDRCEPGYWGL---SKI-----SSYAPD--IDG-CLK-CGCSQFGSVREDCEQMTG 108
G C+ C GY+ S+I S+ +P+ + G +K C C+ G + E C+ G
Sbjct: 353 RGDHCEECAAGYYHFPVCSRIPILPISTPSPEDPVAGDIIKGCDCNLEGVLPEICDAQ-G 411
Query: 109 RCVCKPGVKGSKCNEC 124
RC+C+PGV G++C+ C
Sbjct: 412 RCLCRPGVGGAQCDAC 427
Score = 133 (51.9 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 37/105 (35%), Positives = 49/105 (46%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ LGS + C T QC+C+ G+ G +CDRC LS S + P G C
Sbjct: 440 CQCSALGSYQTPCSPVTGQCECQPGITGQRCDRC------LSGASDF-PHCQGSSNV-CD 491
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC--LDPN-KKLGPNGC 136
G+V + G C CK V+ C+ C L N K P+GC
Sbjct: 492 PAGTV----DSSLGHCQCKLHVESPSCSICKPLYWNLAKENPDGC 532
>MGI|MGI:105382 [details] [associations]
symbol:Lama5 "laminin, alpha 5" species:10090 "Mus musculus"
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IMP] [GO:0001738 "morphogenesis of a polarized epithelium"
evidence=IMP] [GO:0001755 "neural crest cell migration"
evidence=IMP] [GO:0001942 "hair follicle development" evidence=IMP]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005178 "integrin
binding" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IDA]
[GO:0005604 "basement membrane" evidence=ISO;IDA] [GO:0005605
"basal lamina" evidence=IDA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005610 "laminin-5 complex" evidence=ISO]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007229 "integrin-mediated signaling
pathway" evidence=ISO] [GO:0007517 "muscle organ development"
evidence=IMP] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0016331 "morphogenesis of embryonic epithelium" evidence=IMP]
[GO:0016477 "cell migration" evidence=ISO] [GO:0030155 "regulation
of cell adhesion" evidence=IEA] [GO:0030324 "lung development"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0034446 "substrate adhesion-dependent cell
spreading" evidence=ISO] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IMP] [GO:0043259 "laminin-10 complex"
evidence=ISO;IPI] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0048754 "branching morphogenesis of an epithelial
tube" evidence=IMP] [GO:0060445 "branching involved in salivary
gland morphogenesis" evidence=IMP] [GO:0090002 "establishment of
protein localization to plasma membrane" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
MGI:MGI:105382 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0005178 PROSITE:PS01186 GO:GO:0007229 GO:GO:0042475
EMBL:AL663027 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738 GO:GO:0034446
GO:GO:0090002 GO:GO:0016331 GO:GO:0001658 GO:GO:0060445
Pfam:PF02210 GO:GO:0045995 eggNOG:NOG292643
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240 CTD:3911
OMA:LRHTTGP OrthoDB:EOG4VHK5G ChiTaRS:LAMA5 GO:GO:0043259
EMBL:AJ293593 EMBL:U37501 IPI:IPI00116913 PIR:T10053
RefSeq:NP_001074640.1 UniGene:Mm.4339 PDB:2Y38 PDBsum:2Y38
ProteinModelPortal:Q61001 SMR:Q61001 STRING:Q61001
PhosphoSite:Q61001 PaxDb:Q61001 PRIDE:Q61001
Ensembl:ENSMUST00000015791 GeneID:16776 KEGG:mmu:16776
InParanoid:A2ABW7 EvolutionaryTrace:Q61001 NextBio:290620
Bgee:Q61001 CleanEx:MM_LAMA5 Genevestigator:Q61001
GermOnline:ENSMUSG00000015647 Uniprot:Q61001
Length = 3718
Score = 190 (71.9 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 40/113 (35%), Positives = 58/113 (51%)
Query: 30 GCPSTCGCNKLGS---TEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
GC C C+ G T+ C D+ QC+C+ V G +CD C PG++G Y P
Sbjct: 1529 GCEE-CNCSGPGVQELTDPTCDMDSGQCRCRPNVAGRRCDTCAPGFYG------Y-PS-- 1578
Query: 87 GCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKL---GPNGC 136
C C C + G++ C+ +TG+C CK V+GS+C++C L P GC
Sbjct: 1579 -CRPCDCHEAGTMASVCDPLTGQCHCKENVQGSRCDQCRVGTFSLDAANPKGC 1630
Score = 175 (66.7 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 38/104 (36%), Positives = 54/104 (51%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
CGC+ G+ + C ++ +C+C+ G G CDRC PGY G Y PD C C C
Sbjct: 593 CGCSPAGTLPEGC-DEAGRCQCRPGFDGPHCDRCLPGYHG------Y-PD---CHACACD 641
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP 138
G++ + C + G C C+PG G+ C EC P P+ C+P
Sbjct: 642 PRGALDQQCG-VGGLCHCRPGYTGATCQEC-SPGFYGFPS-CIP 682
Score = 175 (66.7 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 41/122 (33%), Positives = 54/122 (44%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWG 74
C P A P N C + C C+ G+ + C + +C CK GV G +CDRC GY+G
Sbjct: 2008 CAPGFYGNALLPGN--C-TRCDCSPCGT--ETCDPQSGRCLCKAGVTGQRCDRCLEGYFG 2062
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN 134
+ GC C C E C +G+C C+PG G +C EC L
Sbjct: 2063 FEQCQ-------GCRPCACGPAAKGSE-CHPQSGQCHCQPGTTGPQCLECAPGYWGLPEK 2114
Query: 135 GC 136
GC
Sbjct: 2115 GC 2116
Score = 172 (65.6 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 37/96 (38%), Positives = 46/96 (47%)
Query: 30 GC-PSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
GC P CG GS C + QC C+ G G +C C PGYWGL P+ GC
Sbjct: 2068 GCRPCACGPAAKGSE---CHPQSGQCHCQPGTTGPQCLECAPGYWGL-------PE-KGC 2116
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
+C C R C+ TG C C PG+ G +C+ C
Sbjct: 2117 RRCQCP-----RGHCDPHTGHCTCPPGLSGERCDTC 2147
Score = 168 (64.2 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 36/103 (34%), Positives = 49/103 (47%)
Query: 23 AQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYA 82
A G C C C+ G C ++ QC C+ G G +CD C GY+ +
Sbjct: 536 APGFHGPSC-HPCQCSSPGVANSLCDPESGQCMCRTGFEGDRCDHCALGYF-------HF 587
Query: 83 PDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECL 125
P C CGCS G++ E C++ GRC C+PG G C+ CL
Sbjct: 588 PL---CQLCGCSPAGTLPEGCDE-AGRCQCRPGFDGPHCDRCL 626
Score = 165 (63.1 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 35/93 (37%), Positives = 49/93 (52%)
Query: 37 CNKLG-STEDACIEDTEQ-CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C+ G + + + +T+ C C+ V G CDRC+PGYWGLS A + +GC +C C
Sbjct: 731 CHPAGLAPANPALPETQAPCMCRAHVEGPSCDRCKPGYWGLS-----ASNPEGCTRCSCD 785
Query: 95 QFGSVREDCE-QMTGRCVCKPGVKGSKCNECLD 126
G++ E Q G+C CK V G C C D
Sbjct: 786 PRGTLGGVTECQGNGQCFCKAHVCGKTCAACKD 818
Score = 162 (62.1 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 36/102 (35%), Positives = 50/102 (49%)
Query: 23 AQGPDNAGCPSTCGCNKLGSTEDAC-IEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSY 81
A P+ GC + C C+ G+ + QC CK V G C C+ G++GL Y
Sbjct: 773 ASNPE--GC-TRCSCDPRGTLGGVTECQGNGQCFCKAHVCGKTCAACKDGFFGLD----Y 825
Query: 82 APDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
A D GC C C G++ + CE TG C C+P +G C+E
Sbjct: 826 A-DYFGCRSCRCDVGGALGQGCEPKTGACRCRPNTQGPTCSE 866
Score = 162 (62.1 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 43/145 (29%), Positives = 65/145 (44%)
Query: 35 CGCNKLGSTE---DACIEDTEQCK-CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLK 90
C C+ G C T C+ C + G C+RC PG++G ++ P C +
Sbjct: 1971 CDCSGNGDPNMIFSDCDPLTGACRGCLRHTTGPHCERCAPGFYG----NALLPG--NCTR 2024
Query: 91 CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDP----NKKLG--PNGCMPGMEVKP 144
C CS G+ E C+ +GRC+CK GV G +C+ CL+ + G P C P +
Sbjct: 2025 CDCSPCGT--ETCDPQSGRCLCKAGVTGQRCDRCLEGYFGFEQCQGCRPCACGPAAKGSE 2082
Query: 145 CNGEPPVINLQTGVE----LDCGSG 165
C+ + + Q G L+C G
Sbjct: 2083 CHPQSGQCHCQPGTTGPQCLECAPG 2107
Score = 156 (60.0 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 33/102 (32%), Positives = 46/102 (45%)
Query: 26 PDNAGCPS--TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAP 83
P G P C C+ G+ + C C C+ G G C C PG++G P
Sbjct: 627 PGYHGYPDCHACACDPRGALDQQCGVGG-LCHCRPGYTGATCQECSPGFYGF-------P 678
Query: 84 DIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECL 125
C+ C CS GS+ C+ TG+C C+P V G C+ C+
Sbjct: 679 S---CIPCHCSADGSLHTTCDPTTGQCRCRPRVTGLHCDMCV 717
Score = 145 (56.1 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 44/162 (27%), Positives = 62/162 (38%)
Query: 22 LAQGPDNAGCPS-TCGCNKL---GSTEDACI--EDTEQCKCKQGVGGLKCDRCEPGYWGL 75
++ P N P +C C + D C+ QC C+ G G C+RC PG++G
Sbjct: 1901 VSSDPSNPASPCVSCPCPLAVPSNNFADGCVLRNGRTQCLCRPGYAGASCERCAPGFFGN 1960
Query: 76 SKISSYAPDIDGCLKCGCSQFGS---VREDCEQMTGRCV-CKPGVKGSKCNECLDP--NK 129
+ C C CS G + DC+ +TG C C G C C
Sbjct: 1961 PLVLG-----SSCQPCDCSGNGDPNMIFSDCDPLTGACRGCLRHTTGPHCERCAPGFYGN 2015
Query: 130 KLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
L P C + PC E + Q+G L C +G + C
Sbjct: 2016 ALLPGNCTR-CDCSPCGTE--TCDPQSGRCL-CKAGVTGQRC 2053
Score = 142 (55.0 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 32/98 (32%), Positives = 45/98 (45%)
Query: 27 DNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
+N P CGC+++G+ C QC C+ V G C RC GYWG P+
Sbjct: 1437 NNGALP--CGCHEVGAVSPTCEPFGGQCPCRGHVIGRDCSRCATGYWGF-------PN-- 1485
Query: 87 GCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C C C G+ C+++TG+C+C P C C
Sbjct: 1486 -CRPCDC---GA--RLCDELTGQCICPPRTVPPDCLVC 1517
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 42/140 (30%), Positives = 56/140 (40%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC-SQFGSVREDCEQMTGRCVCKP 114
C+ G+ C+RC PG++ +P + C C C S F CE +TGRC C+P
Sbjct: 401 CQHHTTGINCERCLPGFFRAPDQPLDSPHV--CRPCDCESDFTD--GTCEDLTGRCYCRP 456
Query: 115 GVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTG--VELDCGS-GANREDC 171
G C C + P+ C P + P N + L G V DC + G C
Sbjct: 457 NFTGELCAACAEGYTDF-PH-CYP-LPSFPHNDTREQV-LPAGQIVNCDCNAAGTQGNAC 512
Query: 172 PSD---AYCHITQNF--ARC 186
D C NF A C
Sbjct: 513 RKDPRLGRCVCKPNFRGAHC 532
Score = 122 (48.0 bits), Expect = 0.00021, P = 0.00021
Identities = 34/116 (29%), Positives = 46/116 (39%)
Query: 26 PDNAGCPST--CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAP 83
P G PS C C+ GS C T QC+C+ V GL CD C PG + Y
Sbjct: 672 PGFYGFPSCIPCHCSADGSLHTTCDPTTGQCRCRPRVTGLHCDMCVPGAYNFP----YC- 726
Query: 84 DIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLG---PNGC 136
+ C G + + + C+C+ V+G C+ C L P GC
Sbjct: 727 EAGSCHPAGLAPANPALPETQ---APCMCRAHVEGPSCDRCKPGYWGLSASNPEGC 779
Score = 122 (48.0 bits), Expect = 0.00021, P = 0.00021
Identities = 48/178 (26%), Positives = 68/178 (38%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
+GI + CL ++ PD Q D+ C C T+ C + T +C C+
Sbjct: 406 TGINCERCLPGFFRA-PD-----QPLDSPHVCRPCDCES-DFTDGTCEDLTGRCYCRPNF 458
Query: 61 GGLKCDRCEPGYWGLSK---ISSYAPDID--------G-CLKCGCSQFGSVREDCEQ--M 106
G C C GY + S+ P D G + C C+ G+ C +
Sbjct: 459 TGELCAACAEGYTDFPHCYPLPSF-PHNDTREQVLPAGQIVNCDCNAAGTQGNACRKDPR 517
Query: 107 TGRCVCKPGVKGSKCNECLDP--NKKLGPNGCM-PGMEVKPCNGEPPVINLQTGVELD 161
GRCVCKP +G+ C C P C PG+ C+ E +TG E D
Sbjct: 518 LGRCVCKPNFRGAHCELCAPGFHGPSCHPCQCSSPGVANSLCDPESGQCMCRTGFEGD 575
>UNIPROTKB|Q16787 [details] [associations]
symbol:LAMA3 "Laminin subunit alpha-3" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] [GO:0008544 "epidermis
development" evidence=TAS] [GO:0005198 "structural molecule
activity" evidence=NAS] [GO:0005604 "basement membrane"
evidence=TAS] [GO:0005576 "extracellular region" evidence=TAS]
[GO:0031581 "hemidesmosome assembly" evidence=TAS] [GO:0034329
"cell junction assembly" evidence=TAS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 Reactome:REACT_118779
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0030155 GO:GO:0005198
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
Reactome:REACT_111155 Pathway_Interaction_DB:syndecan_4_pathway
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pathway_Interaction_DB:amb2_neutrophils_pathway
GO:GO:0008544 GO:GO:0005604 DrugBank:DB00009 DrugBank:DB00029
DrugBank:DB00031 InterPro:IPR009030 SUPFAM:SSF57184 Pfam:PF02210
GO:GO:0031581 DrugBank:DB00015 GO:GO:0045995 Orphanet:79402
eggNOG:NOG292643 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
EMBL:L34155 EMBL:AY327115 EMBL:AY327116 EMBL:AB107369 EMBL:AC010754
EMBL:AC067796 EMBL:AC090366 EMBL:X85107 EMBL:X85108 EMBL:X84900
IPI:IPI00377045 IPI:IPI00743994 IPI:IPI00790908 PIR:A55347
RefSeq:NP_000218.2 RefSeq:NP_001121189.1 RefSeq:NP_937762.1
UniGene:Hs.436367 ProteinModelPortal:Q16787 SMR:Q16787
IntAct:Q16787 MINT:MINT-1431248 STRING:Q16787 PhosphoSite:Q16787
DMDM:215274012 PaxDb:Q16787 PRIDE:Q16787 DNASU:3909
Ensembl:ENST00000313654 Ensembl:ENST00000399516 GeneID:3909
KEGG:hsa:3909 UCSC:uc002kuq.3 CTD:3909 GeneCards:GC18P021269
HGNC:HGNC:6483 HPA:CAB010757 HPA:HPA009309 MIM:226700 MIM:245660
MIM:600805 neXtProt:NX_Q16787 Orphanet:79404 Orphanet:2407
PharmGKB:PA30272 HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240
OMA:DSCQGCS OrthoDB:EOG4FBHS0 ChiTaRS:LAMA3 GenomeRNAi:3909
NextBio:15345 PMAP-CutDB:Q6VU68 ArrayExpress:Q16787 Bgee:Q16787
CleanEx:HS_LAMA3 Genevestigator:Q16787 GermOnline:ENSG00000053747
GO:GO:0005610 Uniprot:Q16787
Length = 3333
Score = 189 (71.6 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 40/114 (35%), Positives = 61/114 (53%)
Query: 29 AGCPSTCGCNKLGSTEDA---CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
AGC C C++ G+ E A C D+ QC+CK + G +CDRC G++ P+
Sbjct: 1351 AGCEG-CNCSRRGTIEAAMPECDRDSGQCRCKPRITGRQCDRCASGFYRF-------PE- 1401
Query: 86 DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGP---NGC 136
C+ C C++ G+ C+ TG C+CK V+G++CN C + + L P GC
Sbjct: 1402 --CVPCNCNRDGTEPGVCDPGTGACLCKENVEGTECNVCREGSFHLDPANLKGC 1453
Score = 173 (66.0 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 36/97 (37%), Positives = 49/97 (50%)
Query: 29 AGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
AG C CN G + C + +C C+ GV G +CD C G+ Y+ I C
Sbjct: 485 AGDIKGCDCNLEGVLPEIC-DAHGRCLCRPGVEGPRCDTCRSGF--------YSFPI--C 533
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECL 125
C CS GS + C +TG+C C+PGV G +C+ CL
Sbjct: 534 QACWCSALGSYQMPCSSVTGQCECRPGVTGQRCDRCL 570
Score = 162 (62.1 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 36/95 (37%), Positives = 46/95 (48%)
Query: 29 AGCPSTCGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
+GC S C C+K G+ C + C CK VGG CD CE GY+ L K S+Y
Sbjct: 626 SGC-SECKCHKAGTVSGTGECRQGDGDCHCKSHVGGDSCDTCEDGYFALEK-SNYF---- 679
Query: 87 GCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
GC C C G++ C +G C C+ V G C
Sbjct: 680 GCQGCQCDIGGALSSMCSGPSGVCQCREHVVGKVC 714
Score = 147 (56.8 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 41/136 (30%), Positives = 64/136 (47%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
+G+ + C +Y P + PD GC C C+ D C + + +C CK
Sbjct: 398 AGVNCEQCAKGYYR--PYGVPV-DAPD--GC-IPCSCDP--EHADGCEQGSGRCHCKPNF 449
Query: 61 GGLKCDRCEPGYWG-----------LSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTG 108
G C++C GY+ +S SS P + G +K C C+ G + E C+ G
Sbjct: 450 HGDNCEKCAIGYYNFPFCLRIPIFPVSTPSSEDP-VAGDIKGCDCNLEGVLPEICDAH-G 507
Query: 109 RCVCKPGVKGSKCNEC 124
RC+C+PGV+G +C+ C
Sbjct: 508 RCLCRPGVEGPRCDTC 523
Score = 145 (56.1 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 39/125 (31%), Positives = 53/125 (42%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
C+ G+ C++C GY+ + APD GC+ C C + + CEQ +GRC CKP
Sbjct: 393 CQHNTAGVNCEQCAKGYYRPYGVPVDAPD--GCIPCSCDPEHA--DGCEQGSGRCHCKPN 448
Query: 116 VKGSKCNECLDPNKKLGPNGCM--PGMEVKPCNGEPPVINLQTGVELDCG-SGANREDCP 172
G C +C P C+ P V + E PV G DC G E C
Sbjct: 449 FHGDNCEKCAIGYYNF-PF-CLRIPIFPVSTPSSEDPVAGDIKGC--DCNLEGVLPEICD 504
Query: 173 SDAYC 177
+ C
Sbjct: 505 AHGRC 509
Score = 137 (53.3 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 36/105 (34%), Positives = 48/105 (45%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ LGS + C T QC+C+ GV G +CDRC G + P G C
Sbjct: 536 CWCSALGSYQMPCSSVTGQCECRPGVTGQRCDRCLSGAYDF-------PHCQGS-SSACD 587
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC--LDPN-KKLGPNGC 136
G++ + G C CK V+G C+ C L N K P+GC
Sbjct: 588 PAGTINSNL----GYCQCKLHVEGPTCSRCKLLYWNLDKENPSGC 628
Score = 137 (53.3 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 36/111 (32%), Positives = 51/111 (45%)
Query: 19 NKTLAQGPDNAGCP-STCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSK 77
++ L+ D C S+ C+ G+ + C+CK V G C RC+ YW L K
Sbjct: 567 DRCLSGAYDFPHCQGSSSACDPAGTINS----NLGYCQCKLHVEGPTCSRCKLLYWNLDK 622
Query: 78 ISSYAPDIDGCLKCGCSQFGSVRE--DCEQMTGRCVCKPGVKGSKCNECLD 126
+ P GC +C C + G+V +C Q G C CK V G C+ C D
Sbjct: 623 EN---PS--GCSECKCHKAGTVSGTGECRQGDGDCHCKSHVGGDSCDTCED 668
Score = 136 (52.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 32/103 (31%), Positives = 44/103 (42%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ G+T C + QC C+ V G +C RC G++G + C C C
Sbjct: 1266 CECHPTGATGPHCSPEGGQCPCQPNVIGRQCTRCATGHYGFPR----------CKPCSCG 1315
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN-GC 136
R CE+MTG+C C P +C C + P GC
Sbjct: 1316 -----RRLCEEMTGQCRCPPRTVRPQCEVCETHSFSFHPMAGC 1353
Score = 134 (52.2 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 48/172 (27%), Positives = 67/172 (38%)
Query: 10 DSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCDRC 68
DS GC P +G C C CN G + C + + C C+ G C+RC
Sbjct: 1663 DSCQGCSPGYYRDHKGLYTGRCVP-CNCN--GHSNQ-CQDGSGICVNCQHNTAGEHCERC 1718
Query: 69 EPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTG--RCVCKPGVKGSKCNECLD 126
+ GY+G + S C C C S C G RC CK G G++C C
Sbjct: 1719 QEGYYGNAVHGS-------CRACPCPHTNSFATGCVVNGGDVRCSCKAGYTGTQCERCA- 1770
Query: 127 PNKKLGPNGCMPGMEVKPC----NGEPPVINLQTGVELDCGSGANREDCPSD 174
P P G +PC NG+ + TG DC + ++ P++
Sbjct: 1771 PGYFGNPQKF--GGSCQPCSCNSNGQLGSCHPLTG---DCINQEPKDSSPAE 1817
Score = 128 (50.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 29/99 (29%), Positives = 42/99 (42%)
Query: 30 GCPSTCGCNKLGSTEDACIED--TEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
G C C S C+ + +C CK G G +C+RC PGY+G + +
Sbjct: 1729 GSCRACPCPHTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQ--KFG---GS 1783
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
C C C+ G + C +TG C+ + S EC D
Sbjct: 1784 CQPCSCNSNGQLGS-CHPLTGDCINQEPKDSSPAEECDD 1821
>UNIPROTKB|Q13753 [details] [associations]
symbol:LAMC2 "Laminin subunit gamma-2" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] [GO:0008201 "heparin binding"
evidence=IEA] [GO:0008544 "epidermis development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0031581
"hemidesmosome assembly" evidence=TAS] [GO:0034329 "cell junction
assembly" evidence=TAS] Reactome:REACT_118779 GO:GO:0005938
GO:GO:0048471 Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0005576 GO:GO:0005615 GO:GO:0008201
GO:GO:0007155 EMBL:CH471067 PROSITE:PS00022 Reactome:REACT_111155
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0008544
InterPro:IPR009030 SUPFAM:SSF57184 GO:GO:0031581 Orphanet:79402
InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052 SMART:SM00281
PROSITE:PS51115 MIM:226700 Orphanet:79404 GO:GO:0005610
GO:GO:0005607 EMBL:AL354953 EMBL:Z15008 EMBL:Z15009 EMBL:X73902
EMBL:U31201 EMBL:U31178 EMBL:U31179 EMBL:U31180 EMBL:U31181
EMBL:U31182 EMBL:U31183 EMBL:U31184 EMBL:U31186 EMBL:U31187
EMBL:U31188 EMBL:U31189 EMBL:U31190 EMBL:U31191 EMBL:U31192
EMBL:U31193 EMBL:U31194 EMBL:U31195 EMBL:U31196 EMBL:U31197
EMBL:U31198 EMBL:U31199 EMBL:U31200 EMBL:BC113378 IPI:IPI00015117
IPI:IPI00220572 PIR:A44018 RefSeq:NP_005553.2 RefSeq:NP_061486.2
UniGene:Hs.591484 ProteinModelPortal:Q13753 SMR:Q13753 DIP:DIP-190N
MINT:MINT-4053464 STRING:Q13753 Allergome:8331 PhosphoSite:Q13753
DMDM:90185107 PaxDb:Q13753 PeptideAtlas:Q13753 PRIDE:Q13753
Ensembl:ENST00000264144 Ensembl:ENST00000493293 GeneID:3918
KEGG:hsa:3918 UCSC:uc001gpz.4 UCSC:uc001gqa.2 CTD:3918
GeneCards:GC01P183155 HGNC:HGNC:6493 HPA:CAB004257 HPA:HPA024638
MIM:150292 neXtProt:NX_Q13753 PharmGKB:PA30281 eggNOG:NOG285700
HOVERGEN:HBG062127 InParanoid:Q13753 KO:K06246 OMA:DRCLPCN
OrthoDB:EOG4ZCT3N PhylomeDB:Q13753 ChiTaRS:LAMC2 GenomeRNAi:3918
NextBio:15391 PMAP-CutDB:Q13753 ArrayExpress:Q13753 Bgee:Q13753
CleanEx:HS_LAMC2 Genevestigator:Q13753 GermOnline:ENSG00000058085
Uniprot:Q13753
Length = 1193
Score = 184 (69.8 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 40/107 (37%), Positives = 52/107 (48%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPD--IDGCLKCG 92
C CN GS C +++ +C CK GV G +CDRC PG+ L+ +D KC
Sbjct: 84 CNCNSKGSLSARC-DNSGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDS--KCD 140
Query: 93 CSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKL---GPNGC 136
C G + C+ GRCVCKP V G +C+ C L P GC
Sbjct: 141 CDPAG-IAGPCD--AGRCVCKPAVTGERCDRCRSGYYNLDGGNPEGC 184
Score = 171 (65.3 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 44/150 (29%), Positives = 63/150 (42%)
Query: 12 WYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE---------QC-KCKQGVG 61
W GCC L C CN G + CI D E +C C
Sbjct: 5 WLGCCLCFSLLLPAARATSRREVCDCN--GKSRQ-CIFDRELHRQTGNGFRCLNCNDNTD 61
Query: 62 GLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
G+ C++C+ G++ + D CL C C+ GS+ C+ +GRC CKPGV G++C
Sbjct: 62 GIHCEKCKNGFYRHR-------ERDRCLPCNCNSKGSLSARCDN-SGRCSCKPGVTGARC 113
Query: 122 NECLDPNKKLGPNGCMPGMEV--KPCNGEP 149
+ CL L GC + C+ +P
Sbjct: 114 DRCLPGFHMLTDAGCTQDQRLLDSKCDCDP 143
Score = 159 (61.0 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 41/123 (33%), Positives = 53/123 (43%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQG 59
+G + C D ++G P + GP P C N S C T +C KC
Sbjct: 489 TGARCELCADGYFGD-PFGE---HGPVRPCQPCQCNNNVDPSASGNCDRLTGRCLKCIHN 544
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPD-IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
G+ CD+C+ GY+G AP+ D C C C+ GS C G CVCKPG G
Sbjct: 545 TAGIYCDQCKAGYFG----DPLAPNPADKCRACNCNPMGSEPVGCRS-DGTCVCKPGFGG 599
Query: 119 SKC 121
C
Sbjct: 600 PNC 602
Score = 132 (51.5 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 45/164 (27%), Positives = 67/164 (40%)
Query: 31 CPSTCG--CNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
CP G C+ + TE+ + C GV G +C+ C GY+G + P + C
Sbjct: 462 CPCHNGFSCSVMPETEEVVCNN-----CPPGVTGARCELCADGYFG-DPFGEHGP-VRPC 514
Query: 89 LKCGCSQF--GSVREDCEQMTGRCV-CKPGVKGSKCNECLDP--NKKLGPNGCMPGMEVK 143
C C+ S +C+++TGRC+ C G C++C L PN P + +
Sbjct: 515 QPCQCNNNVDPSASGNCDRLTGRCLKCIHNTAGIYCDQCKAGYFGDPLAPN---PADKCR 571
Query: 144 PCN----GEPPVINLQTGVELDCGSGANREDCPSDAY-CHITQN 182
CN G PV G + C G +C A+ C N
Sbjct: 572 ACNCNPMGSEPVGCRSDGTCV-CKPGFGGPNCEHGAFSCPACYN 614
Score = 102 (41.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 25/73 (34%), Positives = 32/73 (43%)
Query: 33 STCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCG 92
S C C+ G C D +C CK V G +CDRC GY+ L + +GC +C
Sbjct: 137 SKCDCDPAGIA-GPC--DAGRCVCKPAVTGERCDRCRSGYYNLD-----GGNPEGCTQCF 188
Query: 93 C-SQFGSVREDCE 104
C S R E
Sbjct: 189 CYGHSASCRSSAE 201
Score = 71 (30.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 27/78 (34%), Positives = 34/78 (43%)
Query: 109 RCVCKPGVKGSKCNECLDPNKK----LGPNG-CMPGMEVKPCNGEPPVINLQTGVELDCG 163
+C+C G KG C +C K+ LGP G C+P C G + TG DC
Sbjct: 381 QCICPVGYKGQFCQDCASGYKRDSARLGPFGTCIPCN----CQGGG-ACDPDTG---DCY 432
Query: 164 SG-ANRE----DCPSDAY 176
SG N + DCP Y
Sbjct: 433 SGDENPDIECADCPIGFY 450
>UNIPROTKB|P25391 [details] [associations]
symbol:LAMA1 "Laminin subunit alpha-1" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060445 "branching involved
in salivary gland morphogenesis" evidence=IEA] [GO:0061304 "retinal
blood vessel morphogenesis" evidence=IEA] [GO:0005606 "laminin-1
complex" evidence=IDA;IPI] [GO:0005608 "laminin-3 complex"
evidence=IPI] [GO:0005201 "extracellular matrix structural
constituent" evidence=ISS] [GO:0005578 "proteinaceous extracellular
matrix" evidence=ISS] [GO:0007166 "cell surface receptor signaling
pathway" evidence=ISS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] [GO:0031012 "extracellular matrix"
evidence=TAS] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
GO:GO:0005615 GO:GO:0030155
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0007155
Pathway_Interaction_DB:glypican_1pathway GO:GO:0005911
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166
Pathway_Interaction_DB:syndecan_4_pathway PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pathway_Interaction_DB:amb2_neutrophils_pathway
DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031 GO:GO:0060441
GO:GO:0060445 GO:GO:0045198 DrugBank:DB00015 GO:GO:0045995
GO:GO:0005201 GO:GO:0043208 GO:GO:0002011 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 EMBL:AP002409 EMBL:AP005062 EMBL:AP005210 EMBL:X58531
IPI:IPI00375294 PIR:S14458 RefSeq:NP_005550.2 UniGene:Hs.270364
ProteinModelPortal:P25391 SMR:P25391 DIP:DIP-29324N
MINT:MINT-6740485 STRING:P25391 PhosphoSite:P25391 PaxDb:P25391
PRIDE:P25391 Ensembl:ENST00000389658 GeneID:284217 KEGG:hsa:284217
UCSC:uc002knm.3 CTD:284217 GeneCards:GC18M006941 H-InvDB:HIX0014316
HGNC:HGNC:6481 HPA:CAB010179 MIM:150320 neXtProt:NX_P25391
PharmGKB:PA30270 eggNOG:NOG247347 HOGENOM:HOG000293201
HOVERGEN:HBG052298 InParanoid:P25391 KO:K05637 OMA:EPFYWRL
OrthoDB:EOG4K3KVB ChiTaRS:LAMA1 GenomeRNAi:284217 NextBio:94628
ArrayExpress:P25391 Bgee:P25391 CleanEx:HS_LAMA1
Genevestigator:P25391 GermOnline:ENSG00000101680 GO:GO:0005606
GO:GO:0005608 Uniprot:P25391
Length = 3075
Score = 188 (71.2 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 51/150 (34%), Positives = 68/150 (45%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDT---------- 51
GI ++C+D +Y P ++ D P C C+ +GS CI+D
Sbjct: 370 GINCETCIDGYYR--PHK--VSPYEDEPCRP--CNCDPVGSLSSVCIKDDLHSDLHNGKQ 423
Query: 52 -EQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRC 110
QC CK+G G KCDRC+ GY D C+ CGC+ GS + E TG C
Sbjct: 424 PGQCPCKEGYTGEKCDRCQLGY----------KDYPTCVSCGCNPVGSASD--EPCTGPC 471
Query: 111 VCKPGVKGSKCNECLDPN----KKLGPNGC 136
VCK V+G C+ C P K+ P GC
Sbjct: 472 VCKENVEGKACDRC-KPGFYNLKEKNPRGC 500
Score = 188 (71.2 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 47/137 (34%), Positives = 61/137 (44%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVG 61
G + + C D +YG D T C + C C+ GS C +T C CK V
Sbjct: 879 GAHCERCADGFYG---DAVTAKN------CRA-CECHVKGSHSAVCHLETGLCDCKPNVT 928
Query: 62 GLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
G +CD+C GY+GL S + GC C CS GSV + C G+C C PGV G +C
Sbjct: 929 GQQCDQCLHGYYGLD--SGH-----GCRPCNCSVAGSVSDGCTD-EGQCHCVPGVAGKRC 980
Query: 122 NECLDPNKKLGPNGCMP 138
+ C C P
Sbjct: 981 DRCAHGFYAYQDGSCTP 997
Score = 187 (70.9 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 44/144 (30%), Positives = 68/144 (47%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
G + C C T++ C +T +C C G+KC+ CE G+WG Y ++ GC
Sbjct: 993 GSCTPCDCPH---TQNTCDPETGECVCPPHTQGVKCEECEDGHWG------YDAEV-GCQ 1042
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP-GMEVKPCNGE 148
C CS GS C+ +TG C CK G C++C + P+ C+P +++ +G+
Sbjct: 1043 ACNCSLVGSTHHRCDVVTGHCQCKSKFGGRACDQCSLGYRDF-PD-CVPCDCDLRGTSGD 1100
Query: 149 PPVINLQTGVELDCGSGANREDCP 172
NL+ G+ CG CP
Sbjct: 1101 --ACNLEQGL---CGCVEETGACP 1119
Score = 169 (64.5 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 42/141 (29%), Positives = 63/141 (44%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE---QCK-C 56
+G + C +YG K D A C C + S C+ + + +C C
Sbjct: 1427 AGDHCDVCTSGYYG-----KVTGSASDCALC--ACPHSPPASFSPTCVLEGDHDFRCDAC 1479
Query: 57 KQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGV 116
G G C+RC Y+G + P C KC C+ GSV DC++ +G+CVC+ G
Sbjct: 1480 LLGYEGKHCERCSSSYYG----NPQTPG-GSCQKCDCNPHGSVHGDCDRTSGQCVCRLGA 1534
Query: 117 KGSKCNECLDPNKKLGPNGCM 137
G +C+EC +P L C+
Sbjct: 1535 SGLRCDEC-EPRHILMETDCV 1554
Score = 167 (63.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 39/112 (34%), Positives = 50/112 (44%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL 89
GC + C C+ +GST C T C+CK GG CD+C GY D+ G
Sbjct: 1040 GCQA-CNCSLVGSTHHRCDVVTGHCQCKSKFGGRACDQCSLGYRDFPDCVPCDCDLRGTS 1098
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKL---GPNGCMP 138
C+ + C + TG C CK V G +CNEC + L P GC P
Sbjct: 1099 GDACNLEQGLC-GCVEETGACPCKENVFGPQCNECREGTFALRADNPLGCSP 1149
Score = 152 (58.6 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 49/194 (25%), Positives = 71/194 (36%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCK-CKQG 59
+G++ + CL +YG P T A CP T N T D C C G
Sbjct: 765 TGVHCEQCLPGFYGE-PSRGTPGDCQPCA-CPLTIASNNFSPTCHLNDGDEVVCDWCAPG 822
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRE--DCEQMTGRCV-CKPGV 116
G C+RC GY+G + + C+ C CS E C+ +TG C+ C
Sbjct: 823 YSGAWCERCADGYYGNPTVPG-----ESCVPCDCSGNVDPSEAGHCDSVTGECLKCLGNT 877
Query: 117 KGSKCNECLDP--NKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSD 174
G+ C C D + C E V +L+TG+ DC + C
Sbjct: 878 DGAHCERCADGFYGDAVTAKNCR-ACECHVKGSHSAVCHLETGL-CDCKPNVTGQQCDQC 935
Query: 175 AYCHITQNFARCCR 188
+ + + CR
Sbjct: 936 LHGYYGLDSGHGCR 949
Score = 133 (51.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 36/104 (34%), Positives = 50/104 (48%)
Query: 27 DNAGCPSTCGCNKLGSTEDA-CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
D C S CGCN +GS D C T C CK+ V G CDRC+PG++ L + + P
Sbjct: 447 DYPTCVS-CGCNPVGSASDEPC---TGPCVCKENVEGKACDRCKPGFYNLKEKN---PR- 498
Query: 86 DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNK 129
GC +C C FG V + C ++ + G + + P K
Sbjct: 499 -GCSECFC--FG-VSDVCSSLSWPVGQVNSMSGWLVTDLISPRK 538
Score = 118 (46.6 bits), Expect = 0.00059, P = 0.00059
Identities = 45/157 (28%), Positives = 59/157 (37%)
Query: 2 GIYLKSCLDSWY-GCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQG 59
G + C ++ G P P A C C CN + D C +T +C C
Sbjct: 1370 GFSCQDCAPGYHRGKLPAGSDRGPRPLVAPCVP-CSCN---NHSDTCDPNTGKCLNCGDN 1425
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC--SQFGSVREDCEQMTG----RC-VC 112
G CD C GY+G K++ A D C C C S S C + G RC C
Sbjct: 1426 TAGDHCDVCTSGYYG--KVTGSASD---CALCACPHSPPASFSPTCV-LEGDHDFRCDAC 1479
Query: 113 KPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEP 149
G +G C C + G N PG + C+ P
Sbjct: 1480 LLGYEGKHCERC--SSSYYG-NPQTPGGSCQKCDCNP 1513
Score = 93 (37.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 24/79 (30%), Positives = 36/79 (45%)
Query: 35 CGCNKLGSTEDAC---------IEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
C C+ G++ DAC +E+T C CK+ V G +C+ C G + L A +
Sbjct: 1090 CDCDLRGTSGDACNLEQGLCGCVEETGACPCKENVFGPQCNECREGTFALR-----ADNP 1144
Query: 86 DGCLKCGCSQFGSVREDCE 104
GC C CS + + E
Sbjct: 1145 LGCSPCFCSGLSHLCSELE 1163
Score = 87 (35.7 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 29/98 (29%), Positives = 40/98 (40%)
Query: 101 EDCEQMTGRCVCKPGVKGSKCNECLDPNKKLG--PNGCMPGME--VKPC-----NGEPPV 151
E+ + CVC PG G C +C P G P G G V PC N
Sbjct: 1353 EEVASLLENCVCPPGTVGFSCQDCA-PGYHRGKLPAGSDRGPRPLVAPCVPCSCNNHSDT 1411
Query: 152 INLQTGVELDCG---SGANREDCPSDAYCHITQNFARC 186
+ TG L+CG +G + + C S Y +T + + C
Sbjct: 1412 CDPNTGKCLNCGDNTAGDHCDVCTSGYYGKVTGSASDC 1449
>UNIPROTKB|F1MAN8 [details] [associations]
symbol:Lama5 "Protein Lama5" species:10116 "Rattus
norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 RGD:621023 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0007229 GO:GO:0042475 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738
GO:GO:0034446 GO:GO:0090002 GO:GO:0016331 GO:GO:0001658
GO:GO:0060445 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:LRHTTGP GO:GO:0043259 IPI:IPI00190577
Ensembl:ENSRNOT00000008981 ArrayExpress:F1MAN8 Uniprot:F1MAN8
Length = 3719
Score = 181 (68.8 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 39/96 (40%), Positives = 47/96 (48%)
Query: 30 GC-PSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
GC P CG GS C T QC C+ G G +C C PGYWGL P+ GC
Sbjct: 2070 GCHPCACGPAAEGSE---CNPQTGQCHCRPGTTGPQCLECAPGYWGL-------PE-KGC 2118
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
+C C R C+ TGRC C PG+ G +C+ C
Sbjct: 2119 RRCQCP-----RGHCDPHTGRCTCPPGLSGERCDTC 2149
Score = 175 (66.7 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 52/155 (33%), Positives = 69/155 (44%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
CGC+ G+ C +++ C+C+ G G CDRC PGY G Y PD C C C
Sbjct: 592 CGCSPAGTLPQGC-DESGHCQCRPGFDGPHCDRCLPGYHG------Y-PD---CHACACD 640
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP-------GMEVK--PC 145
GS+ + C G C C+PG G+ C EC P P+ C+P M P
Sbjct: 641 PRGSLDQQCGA-GGLCHCRPGYTGATCQEC-SPGFYGFPS-CIPCHCSADGSMHTTCDPT 697
Query: 146 NGEPPVINLQTGVELD-CGSGA-NREDCPSDAYCH 178
G+ TG+ D C GA N C + + CH
Sbjct: 698 TGQCRCRPRVTGLRCDMCVPGAYNFPYCEAGS-CH 731
Score = 173 (66.0 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 49/161 (30%), Positives = 70/161 (43%)
Query: 35 CGCNKLGSTE---DACIEDTEQCK-CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLK 90
C C+ G C T C+ C + G +C+ C PG++G ++ P C +
Sbjct: 1973 CDCSGNGDPNMIFSDCDPLTGACRGCLRHTTGPRCESCAPGFYG----NALLPG--NCTR 2026
Query: 91 CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGP-NGCMPGMEVKPCNGEP 149
C CS G+ E C+ TGRC+CK GV G +C+ CL+ + GC P P E
Sbjct: 2027 CDCSPCGT--ETCDPQTGRCLCKAGVTGQRCDHCLEGHFGFEQCQGCHP-CACGPA-AEG 2082
Query: 150 PVINLQTGVELDCGSGANREDCPSDA--YCHITQNFARCCR 188
N QTG + C G C A Y + + R C+
Sbjct: 2083 SECNPQTG-QCHCRPGTTGPQCLECAPGYWGLPEKGCRRCQ 2122
Score = 163 (62.4 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 37/94 (39%), Positives = 45/94 (47%)
Query: 34 TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
+C L A E C C+ V G CDRC+PGYWGLS S P+ GC +C C
Sbjct: 729 SCHPAGLAPANPALPEAQAPCTCRAHVEGPSCDRCKPGYWGLS---SSNPE--GCTRCSC 783
Query: 94 SQFGSVREDCE-QMTGRCVCKPGVKGSKCNECLD 126
G++ E Q G+C CK V G C C D
Sbjct: 784 DPRGTLGGVTECQGNGQCFCKAHVCGKTCAACKD 817
Score = 163 (62.4 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 34/102 (33%), Positives = 47/102 (46%)
Query: 26 PDNAGCPS--TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAP 83
P G P C C+ GS + C C C+ G G C C PG++G P
Sbjct: 626 PGYHGYPDCHACACDPRGSLDQQCGAGG-LCHCRPGYTGATCQECSPGFYGF-------P 677
Query: 84 DIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECL 125
C+ C CS GS+ C+ TG+C C+P V G +C+ C+
Sbjct: 678 S---CIPCHCSADGSMHTTCDPTTGQCRCRPRVTGLRCDMCV 716
Score = 162 (62.1 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 32/91 (35%), Positives = 46/91 (50%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ G C ++ QC C+ G G KCD C GY+ + P C CGCS
Sbjct: 546 CQCSSPGVANGLCDPESGQCTCRTGFEGDKCDHCALGYF-------HFPL---CQLCGCS 595
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNECL 125
G++ + C++ +G C C+PG G C+ CL
Sbjct: 596 PAGTLPQGCDE-SGHCQCRPGFDGPHCDRCL 625
Score = 161 (61.7 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 39/116 (33%), Positives = 56/116 (48%)
Query: 30 GCPSTCGCNKLGS---TEDACIEDTEQ-C--KCKQGVGGLKCDRCEPGYWGLSKISSYAP 83
GC C C+ G T+ C D+ C +C+ V G +CD C PG++ SY P
Sbjct: 1528 GCEE-CNCSGPGVQELTDPTCDMDSGHLCPHRCRPNVAGRRCDTCAPGFY------SY-P 1579
Query: 84 DIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKL---GPNGC 136
C C C + G++ C+ TG+C CK V+GS+C++C L P GC
Sbjct: 1580 S---CRPCDCHEAGTMASVCDPFTGQCHCKENVQGSRCDQCRVGTFSLDAANPKGC 1632
Score = 158 (60.7 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 32/95 (33%), Positives = 45/95 (47%)
Query: 30 GCPSTCGCNKLGSTEDAC-IEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
GC + C C+ G+ + QC CK V G C C+ G++GL Y GC
Sbjct: 777 GC-TRCSCDPRGTLGGVTECQGNGQCFCKAHVCGKTCAACKDGFFGLDHADYY-----GC 830
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
C C G++ + CE TG C C+P +G C+E
Sbjct: 831 RSCRCDVGGALGQGCEPKTGACRCRPNTQGPSCSE 865
Score = 156 (60.0 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 33/98 (33%), Positives = 46/98 (46%)
Query: 29 AGCPSTCGCNKLGSTEDACIEDTE--QCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
AG C CN G+ +AC +D +C CK G C+ C PG++G S
Sbjct: 493 AGQIVNCDCNAAGTQGNACRKDPRLGRCVCKPNFQGNHCELCAPGFYGPS---------- 542
Query: 87 GCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C C CS G C+ +G+C C+ G +G KC+ C
Sbjct: 543 -CHPCQCSSPGVANGLCDPESGQCTCRTGFEGDKCDHC 579
Score = 151 (58.2 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 47/164 (28%), Positives = 61/164 (37%)
Query: 31 CPSTCGCNKLGSTEDACI--EDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
CP N D CI QC C+ G G C+RC PG++G + C
Sbjct: 1919 CPLAVPSNNFA---DGCILRNGRTQCLCRPGYAGASCERCAPGFFGNPLVLG-----SSC 1970
Query: 89 LKCGCSQFGS---VREDCEQMTGRCV-CKPGVKGSKCNECLDP--NKKLGPNGCMPGMEV 142
C CS G + DC+ +TG C C G +C C L P C +
Sbjct: 1971 QPCDCSGNGDPNMIFSDCDPLTGACRGCLRHTTGPRCESCAPGFYGNALLPGNCTR-CDC 2029
Query: 143 KPCNGEPPVINLQTGVELDCGSGANREDCPSDAYCHITQNFARC 186
PC E + QTG L C +G + C H F +C
Sbjct: 2030 SPCGTE--TCDPQTGRCL-CKAGVTGQRCDHCLEGHF--GFEQC 2068
Score = 140 (54.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 32/98 (32%), Positives = 45/98 (45%)
Query: 27 DNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
+N P CGC+++G+ C QC C+ V G C RC GYWG P+
Sbjct: 1436 NNGALP--CGCHEVGAVGPTCEPFGGQCPCRGHVIGRDCSRCATGYWGF-------PN-- 1484
Query: 87 GCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C C C G+ C+++TG+C+C P C C
Sbjct: 1485 -CRPCDC---GA--RLCDELTGQCICPPRTVPPDCLVC 1516
Score = 137 (53.3 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 38/123 (30%), Positives = 54/123 (43%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC-SQFGSVREDCEQMTGRCVCKP 114
C+ G+ C+RC PG++ +P + C C C S F CE +TGRC C+P
Sbjct: 400 CQHHTTGINCERCVPGFYRAPDQPLDSPHV--CQPCDCESDFTD--GTCEDLTGRCYCRP 455
Query: 115 GVKGSKCNECLDPNKKLGPNGCMPGMEVKPCN--GEPPVINLQTGVELDCGS-GANREDC 171
G +C+ C + P+ C P + P N GE V+ V DC + G C
Sbjct: 456 NFTGERCSACAEGYVDF-PH-CYP-LPSFPHNDTGEQ-VLPAGQIVNCDCNAAGTQGNAC 511
Query: 172 PSD 174
D
Sbjct: 512 RKD 514
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 46/177 (25%), Positives = 68/177 (38%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
+GI + C+ +Y PD Q D+ C C T+ C + T +C C+
Sbjct: 405 TGINCERCVPGFYRA-PD-----QPLDSPHVCQPCDCES-DFTDGTCEDLTGRCYCRPNF 457
Query: 61 GGLKCDRCEPGYWGLSK---ISSYAPDIDG--------CLKCGCSQFGSVREDCEQ--MT 107
G +C C GY + S+ + G + C C+ G+ C +
Sbjct: 458 TGERCSACAEGYVDFPHCYPLPSFPHNDTGEQVLPAGQIVNCDCNAAGTQGNACRKDPRL 517
Query: 108 GRCVCKPGVKGSKCNECLDP--NKKLGPNGCM-PGMEVKPCNGEPPVINLQTGVELD 161
GRCVCKP +G+ C C P C PG+ C+ E +TG E D
Sbjct: 518 GRCVCKPNFQGNHCELCAPGFYGPSCHPCQCSSPGVANGLCDPESGQCTCRTGFEGD 574
Score = 126 (49.4 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 34/117 (29%), Positives = 46/117 (39%)
Query: 26 PDNAGCPST--CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAP 83
P G PS C C+ GS C T QC+C+ V GL+CD C PG + Y
Sbjct: 671 PGFYGFPSCIPCHCSADGSMHTTCDPTTGQCRCRPRVTGLRCDMCVPGAYNFP----YC- 725
Query: 84 DIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPN----KKLGPNGC 136
+ C G + + + C C+ V+G C+ C P P GC
Sbjct: 726 EAGSCHPAGLAPANPALPEAQ---APCTCRAHVEGPSCDRC-KPGYWGLSSSNPEGC 778
Score = 45 (20.9 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 18 DNKTLAQGPDNAG-CPSTCGCNKLGSTEDACIED 50
D + QG NA CP GC L S E + D
Sbjct: 1324 DGGRIWQGHANASFCPHGYGCRTLVSCEGQTMLD 1357
>UNIPROTKB|F1LWS0 [details] [associations]
symbol:Lama5 "Protein Lama5" species:10116 "Rattus
norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 RGD:621023 GO:GO:0030155 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995
InterPro:IPR000034 Pfam:PF00052 PROSITE:PS51115 GO:GO:0005606
IPI:IPI00566251 Ensembl:ENSRNOT00000051597 ArrayExpress:F1LWS0
Uniprot:F1LWS0
Length = 1728
Score = 181 (68.8 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 39/96 (40%), Positives = 47/96 (48%)
Query: 30 GC-PSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
GC P CG GS C T QC C+ G G +C C PGYWGL P+ GC
Sbjct: 194 GCHPCACGPAAEGSE---CNPQTGQCHCRPGTTGPQCLECAPGYWGL-------PE-KGC 242
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
+C C R C+ TGRC C PG+ G +C+ C
Sbjct: 243 RRCQCP-----RGHCDPHTGRCTCPPGLSGERCDTC 273
>UNIPROTKB|E2RPP1 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 CTD:3909 KO:K06240 OMA:DSCQGCS EMBL:AAEX03005452
RefSeq:XP_537297.2 Ensembl:ENSCAFT00000028869 GeneID:480173
KEGG:cfa:480173 Uniprot:E2RPP1
Length = 3337
Score = 180 (68.4 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 39/114 (34%), Positives = 60/114 (52%)
Query: 29 AGCPSTCGCNKLGSTEDA---CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
AGC C C++ G+ A C D QC+CK + G +CDRC G++ + P+
Sbjct: 1354 AGCEG-CNCSRRGTVGAATRECDRDHGQCRCKPRITGRQCDRCASGFY-------HFPE- 1404
Query: 86 DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKL---GPNGC 136
C+ C C++ G+ C+ TG C+CK V+G++CN C + + L P GC
Sbjct: 1405 --CIPCHCNKDGTESGVCDPGTGVCLCKENVEGTECNVCREGSFYLDPANPKGC 1456
Score = 168 (64.2 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 35/97 (36%), Positives = 49/97 (50%)
Query: 29 AGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
AG C CN G + C + +C C+ GV G +CD C G+ Y+ I C
Sbjct: 485 AGDIKGCDCNWEGVLPEIC-DAYGRCLCRPGVEGPRCDACRVGF--------YSFPI--C 533
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECL 125
C CS GS + C +TG+C C+PG+ G +C+ CL
Sbjct: 534 QACQCSVLGSYQTPCNPVTGQCECQPGITGQRCDRCL 570
Score = 153 (58.9 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 40/109 (36%), Positives = 49/109 (44%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDRCEPGY 72
C P LA+ N GC S C C+ G+ C + C CK V G CD CE GY
Sbjct: 613 CKPLYWNLAKENPN-GC-SECQCHVAGTVSGIGECGQRDGDCHCKSHVSGDSCDTCEDGY 670
Query: 73 WGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
+ L K S+Y GC C C G+V C +G C C+ V G C
Sbjct: 671 FALKK-SNYF----GCQGCQCDIGGAVTPMCSGPSGGCHCREHVVGKAC 714
Score = 150 (57.9 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 40/135 (29%), Positives = 65/135 (48%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
+GI ++C +Y P + P GC C CN D C + +C CK
Sbjct: 398 AGINCENCAKGYYR--PYGVPV-DAPH--GC-IPCSCNP--EHADDCEPGSGRCTCKPNF 449
Query: 61 GGLKCDRCEPGYWG--------LSKISSYAPD--IDGCLK-CGCSQFGSVREDCEQMTGR 109
G C++C GY+ + +S+ +P+ + G +K C C+ G + E C+ GR
Sbjct: 450 QGDNCEKCAVGYYNFPFCLRIPIFPVSTPSPEDPVAGDIKGCDCNWEGVLPEICDAY-GR 508
Query: 110 CVCKPGVKGSKCNEC 124
C+C+PGV+G +C+ C
Sbjct: 509 CLCRPGVEGPRCDAC 523
Score = 143 (55.4 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 40/124 (32%), Positives = 54/124 (43%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
C+ G+ C+ C GY+ + AP GC+ C C+ + +DCE +GRC CKP
Sbjct: 393 CQHNTAGINCENCAKGYYRPYGVPVDAPH--GCIPCSCNPEHA--DDCEPGSGRCTCKPN 448
Query: 116 VKGSKCNECLDPNKKLGPNGCM--PGMEVKPCNGEPPVINLQTGVELDCG-SGANREDCP 172
+G C +C P C+ P V + E PV G DC G E C
Sbjct: 449 FQGDNCEKCAVGYYNF-PF-CLRIPIFPVSTPSPEDPVAGDIKGC--DCNWEGVLPEIC- 503
Query: 173 SDAY 176
DAY
Sbjct: 504 -DAY 506
Score = 134 (52.2 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 38/105 (36%), Positives = 48/105 (45%)
Query: 54 CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRE--DCEQMTGRCV 111
C+CK C C+P YW L+K + P+ GC +C C G+V +C Q G C
Sbjct: 599 CQCKPHAESPSCSICKPLYWNLAKEN---PN--GCSECQCHVAGTVSGIGECGQRDGDCH 653
Query: 112 CKPGVKGSKCNECLDPN---KK---LGPNGCMP--GMEVKP-CNG 147
CK V G C+ C D KK G GC G V P C+G
Sbjct: 654 CKSHVSGDSCDTCEDGYFALKKSNYFGCQGCQCDIGGAVTPMCSG 698
Score = 134 (52.2 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 35/105 (33%), Positives = 48/105 (45%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ LGS + C T QC+C+ G+ G +CDRC G + P G + C
Sbjct: 536 CQCSVLGSYQTPCNPVTGQCECQPGITGQRCDRCLSGAYDF-------PHCQGS-RSVCD 587
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC--LDPN-KKLGPNGC 136
G++ + G C CKP + C+ C L N K PNGC
Sbjct: 588 PAGTL----DSSLGYCQCKPHAESPSCSICKPLYWNLAKENPNGC 628
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 30/99 (30%), Positives = 42/99 (42%)
Query: 30 GCPSTCGCNKLGSTEDACIED--TEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG 87
G S C C S C+ +C CK G G +C+RC PGY+G + +
Sbjct: 1732 GSCSVCPCPHSNSFATGCVVTGGNVRCSCKPGYTGTQCERCAPGYFGNPQ--KFG---GS 1786
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
C C C+ G + C +TG C+ + S EC D
Sbjct: 1787 CQPCNCNSNGHL-SSCHPLTGDCINQEPKDDSPAEECDD 1824
Score = 129 (50.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 28/90 (31%), Positives = 39/90 (43%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ G+ C + QC C+ V G +C RC GY+G P C C C
Sbjct: 1269 CECHPTGAIGRPCSPEGGQCPCRPSVIGRQCTRCRMGYYGF-------PH---CKPCNCG 1318
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
C++MTG+C+C P +C C
Sbjct: 1319 P-----RLCDEMTGKCLCPPHTVRPQCEVC 1343
Score = 108 (43.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 28/85 (32%), Positives = 37/85 (43%)
Query: 87 GCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCN 146
G L C C G++ C G+C C+P V G +C C ++G G P KPCN
Sbjct: 1265 GALPCECHPTGAIGRPCSPEGGQCPCRPSVIGRQCTRC-----RMGYYG-FP--HCKPCN 1316
Query: 147 GEPPVINLQTGVELDCGSGANREDC 171
P + + TG L C R C
Sbjct: 1317 CGPRLCDEMTGKCL-CPPHTVRPQC 1340
Score = 69 (29.3 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 16/58 (27%), Positives = 24/58 (41%)
Query: 16 CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C D + + GC C C+ G+ C + C C++ V G C R E Y+
Sbjct: 666 CEDGYFALKKSNYFGCQG-CQCDIGGAVTPMCSGPSGGCHCREHVVGKACQRPENNYY 722
>UNIPROTKB|E1B7Q3 [details] [associations]
symbol:LAMC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008201 "heparin binding" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] GO:GO:0008201 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052 SMART:SM00281
PROSITE:PS51115 GeneTree:ENSGT00690000102103 GO:GO:0005610
OMA:DRCLPCN EMBL:DAAA02043571 IPI:IPI00715486
Ensembl:ENSBTAT00000061289 ArrayExpress:E1B7Q3 Uniprot:E1B7Q3
Length = 1193
Score = 175 (66.7 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 56/185 (30%), Positives = 76/185 (41%)
Query: 12 WY-GCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE---------QC-KCKQGV 60
W GC + L N+ P C CN G + CI D E +C C
Sbjct: 5 WLSGCLCLSLLLPAARANSRTP-VCDCN--GKSRQ-CIFDQELHRLTGNGFRCLHCSDNT 60
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSK 120
GG+ C+RC+ G++ + D CL C C+ GS+ C+ TGRC CKPGV G +
Sbjct: 61 GGIHCERCKEGFYRHR-------ERDRCLPCNCNSKGSLSPRCDN-TGRCSCKPGVTGDR 112
Query: 121 CNECLDPNKKLGPNGCMPGMEV--KPCNGEPPVI--NLQTGVELDCGSGANREDCPS--D 174
C+ CL L GC ++ C+ +P I TG C E C
Sbjct: 113 CDRCLPGFHTLTDAGCTQDRKLLDSKCDCDPAGIVGPCDTG-RCVCKPAVTGERCDRCRP 171
Query: 175 AYCHI 179
Y H+
Sbjct: 172 GYYHL 176
Score = 160 (61.4 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 41/124 (33%), Positives = 54/124 (43%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQG 59
+G + C D ++G P + GP P C N S C T +C KC
Sbjct: 489 TGARCELCADGYFGD-PFGE---HGPVRPCQPCQCSDNVDPSAPGNCDRLTGRCLKCLHN 544
Query: 60 VGGLKCDRCEPGYWGLSKISSYAPD-IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
G CD+C+ GY+G AP+ D C C C+ GS +C G CVCKPG G
Sbjct: 545 TTGAHCDQCKAGYYG----DPLAPNPADKCRACNCNPMGSEPVECRS-DGSCVCKPGFDG 599
Query: 119 SKCN 122
C+
Sbjct: 600 LNCD 603
Score = 140 (54.3 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 38/132 (28%), Positives = 59/132 (44%)
Query: 26 PDNAGCPSTCGCNKLGSTEDACIEDTEQ--CK-CKQGVGGLKCDRCEPGYWGLSKISSYA 82
P + G C C S + + +TE+ C C G+ G +C+ C GY+G +
Sbjct: 453 PHDPGSCKPCPCRNGFSC--SVMPETEEVVCNNCPHGITGARCELCADGYFG-DPFGEHG 509
Query: 83 PDIDGCLKCGCSQF--GSVREDCEQMTGRCV-CKPGVKGSKCNECLDP--NKKLGPNGCM 137
P + C C CS S +C+++TGRC+ C G+ C++C L PN
Sbjct: 510 P-VRPCQPCQCSDNVDPSAPGNCDRLTGRCLKCLHNTTGAHCDQCKAGYYGDPLAPN--- 565
Query: 138 PGMEVKPCNGEP 149
P + + CN P
Sbjct: 566 PADKCRACNCNP 577
Score = 115 (45.5 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 30/82 (36%), Positives = 37/82 (45%)
Query: 15 CCPDNKTLAQG---PDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPG 71
C P TL D S C C+ G C DT +C CK V G +CDRC PG
Sbjct: 116 CLPGFHTLTDAGCTQDRKLLDSKCDCDPAGIV-GPC--DTGRCVCKPAVTGERCDRCRPG 172
Query: 72 YWGLSKISSYAPDIDGCLKCGC 93
Y+ L + P+ GC +C C
Sbjct: 173 YYHLDGRN---PE--GCTQCFC 189
Score = 81 (33.6 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 29/78 (37%), Positives = 34/78 (43%)
Query: 109 RCVCKPGVKGSKCNECLDPNKK----LGPNG-CMPGMEVKPCNGEPPVINLQTGVELDCG 163
+CVC G KG C+EC K+ LGP G C+P C G + TG DC
Sbjct: 381 QCVCPVGYKGQFCHECASGYKRDSARLGPFGTCIPCN----CQGGG-ACDPDTG---DCY 432
Query: 164 SGANR-----EDCPSDAY 176
SG EDCP Y
Sbjct: 433 SGDENPDIECEDCPIGFY 450
>UNIPROTKB|F1NLU4 [details] [associations]
symbol:LAMB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005610 "laminin-5 complex" evidence=IEA] [GO:0050873
"brown fat cell differentiation" evidence=IEA] GO:GO:0050873
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005610 GeneTree:ENSGT00620000087753
OMA:RSQMEED EMBL:AADN02044975 IPI:IPI00592759
Ensembl:ENSGALT00000002051 Uniprot:F1NLU4
Length = 1165
Score = 174 (66.3 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 37/109 (33%), Positives = 51/109 (46%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDA-CIEDTEQCKCKQGVGGLKCDRCEPGYW 73
C P LA + GC C CN LG+ ++ C ++T C C V G CD+C G+W
Sbjct: 411 CKPGFAQLAHA-NPLGC-RRCACNVLGTRQNVPCDDETGSCSCLPNVVGTDCDQCAAGHW 468
Query: 74 GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN 122
++ GC C C+ GS C Q TG+C C+ G G C+
Sbjct: 469 DMASGR-------GCRPCECNPSGSHSIHCNQFTGQCQCREGFTGRTCS 510
Score = 171 (65.3 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 44/145 (30%), Positives = 65/145 (44%)
Query: 7 SCLDSWYG-----CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVG 61
SCL + G C + +A G GC C CN GS C + T QC+C++G
Sbjct: 450 SCLPNVVGTDCDQCAAGHWDMASG---RGC-RPCECNPSGSHSIHCNQFTGQCQCREGFT 505
Query: 62 GLKCDRCEPGYWGLSKISSYAPDID-GCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSK 120
G C + + D+ GC +C C G+ C++ TG C+C+PGV G +
Sbjct: 506 GRTCSAAQQQVCP----DRHFGDVRVGCTECNCDFQGTEDVGCDKSTGHCLCRPGVTGPR 561
Query: 121 CNECLDPNKKLGPNGCMPGMEVKPC 145
C++C + P+ C P PC
Sbjct: 562 CDQCQRDHCSTYPS-CEP---CHPC 582
Score = 166 (63.5 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 41/140 (29%), Positives = 63/140 (45%)
Query: 35 CGCNKLGSTEDA-CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C C+ G+ + C + C CK+ V G +C C+PG+ L+ +A + GC +C C
Sbjct: 377 CECDPDGTVPGSVCDPLSGHCVCKENVQGERCHLCKPGFAQLA----HANPL-GCRRCAC 431
Query: 94 SQFGSVRE-DCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN-GCMPGMEVKPCNGEPPV 151
+ G+ + C+ TG C C P V G+ C++C + + GC P E P
Sbjct: 432 NVLGTRQNVPCDDETGSCSCLPNVVGTDCDQCAAGHWDMASGRGCRP-CECNPSGSHSIH 490
Query: 152 INLQTGVELDCGSGANREDC 171
N TG + C G C
Sbjct: 491 CNQFTG-QCQCREGFTGRTC 509
Score = 126 (49.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 38/138 (27%), Positives = 54/138 (39%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED-CEQMTGRCVCKP 114
C+ G C+RC+ Y+ + P+ C C C G+V C+ ++G CVCK
Sbjct: 344 CQHNTEGNNCERCKTNYFRNQRQDLTHPE--ACQPCECDPDGTVPGSVCDPLSGHCVCKE 401
Query: 115 GVKGSKCNECLDPNKKLG---PNGCMP-GMEVKPCNGEPPVINLQTGVELDCGSGANRED 170
V+G +C+ C +L P GC V P + +TG C D
Sbjct: 402 NVQGERCHLCKPGFAQLAHANPLGCRRCACNVLGTRQNVPCDD-ETG-SCSCLPNVVGTD 459
Query: 171 CPSDAYCHITQNFARCCR 188
C A H R CR
Sbjct: 460 CDQCAAGHWDMASGRGCR 477
>UNIPROTKB|F1NQC4 [details] [associations]
symbol:F1NQC4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
[GO:0046658 "anchored to plasma membrane" evidence=IEA]
InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
GeneTree:ENSGT00700000104042 EMBL:AADN02026516 IPI:IPI00578210
Ensembl:ENSGALT00000005827 OMA:ALADCEC Uniprot:F1NQC4
Length = 175
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 32/85 (37%), Positives = 45/85 (52%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
CK G C C G++ S S+ D + C++C C+Q GS+ + C + TG C CK G
Sbjct: 25 CKHNTRGQHCQHCRLGFYRNS--SAELDDENVCIECNCNQIGSLHDRCNE-TGYCECKEG 81
Query: 116 VKGSKCNECLDPNKKLGPNGCMPGM 140
G KC++CL PN GC P +
Sbjct: 82 ATGPKCDDCL-PNY-YWRQGCFPNV 104
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 35/89 (39%), Positives = 42/89 (47%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C CN++GS D C E T C+CK+G G KCD C P Y+ D D L C
Sbjct: 58 CNCNQIGSLHDRCNE-TGYCECKEGATGPKCDDCLPNYYWRQGCFPNVCD-DELLLC--- 112
Query: 95 QFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
Q G C Q RC+C G KG C +
Sbjct: 113 QNGGT---CYQ-NQRCICPVGFKGVLCQQ 137
>UNIPROTKB|F1LWK9 [details] [associations]
symbol:Ntng1 "Protein Ntng1" species:10116 "Rattus
norvegicus" [GO:0007409 "axonogenesis" evidence=IEA] [GO:0046658
"anchored to plasma membrane" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 RGD:1563465 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
IPI:IPI00948119 Ensembl:ENSRNOT00000066218 ArrayExpress:F1LWK9
Uniprot:F1LWK9
Length = 457
Score = 167 (63.8 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 55/172 (31%), Positives = 78/172 (45%)
Query: 22 LAQGPDNAGCPS--TCG-CNKLG-STEDACIE--DTEQC-KCKQGVGGLKCDRCEPGYWG 74
+ +G N PS + G C G S + I+ +T C CK G C+ C GY+
Sbjct: 264 IPKGTANTCIPSISSIGNCECFGHSNRCSYIDLLNTVICVSCKHNTRGQHCELCRLGYF- 322
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN 134
S+ D + C++C C+ GS+ + C +G C CK G G KC+ECL N
Sbjct: 323 -RNASAQLDDENVCIECYCNPLGSIHDRCNG-SGFCECKTGTTGPKCDECLPGNSWY--Y 378
Query: 135 GCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSDAYCHITQNFARC 186
GC P + C+ E +++ Q G C + R CP DAY I RC
Sbjct: 379 GCQPNV----CDNE--LLHCQNGGT--CHNNV-RCVCP-DAYTGILCEKLRC 420
>MGI|MGI:1934028 [details] [associations]
symbol:Ntng1 "netrin G1" species:10090 "Mus musculus"
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031225
"anchored to membrane" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IDA] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 MGI:MGI:1934028 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007409 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 CTD:22854 eggNOG:NOG286598
HOVERGEN:HBG052676 KO:K07522 EMBL:AB038662 EMBL:AB038663
EMBL:AB038664 EMBL:AB038665 EMBL:AB038666 EMBL:AB038667
EMBL:AF475069 EMBL:AF475070 EMBL:AF475071 EMBL:AF475072
EMBL:AF475073 EMBL:AF475074 EMBL:AF475075 EMBL:AF475076
EMBL:AF475077 EMBL:AF475078 EMBL:AK034465 EMBL:AK173075
EMBL:BC079881 IPI:IPI00323012 IPI:IPI00323015 IPI:IPI00323016
IPI:IPI00323017 IPI:IPI00354768 IPI:IPI00354771 IPI:IPI00354773
IPI:IPI00465860 IPI:IPI00469999 IPI:IPI00742371
RefSeq:NP_001156820.1 RefSeq:NP_001156821.1 RefSeq:NP_001156822.1
RefSeq:NP_001156823.1 RefSeq:NP_109624.1 RefSeq:NP_597995.1
UniGene:Mm.39262 ProteinModelPortal:Q8R4G0 SMR:Q8R4G0 STRING:Q8R4G0
PRIDE:Q8R4G0 Ensembl:ENSMUST00000072596 GeneID:80883 KEGG:mmu:80883
UCSC:uc008rai.2 UCSC:uc008raj.2 UCSC:uc008rak.2 UCSC:uc008ral.2
UCSC:uc008ram.2 UCSC:uc008rao.2 UCSC:uc008rap.1 UCSC:uc008raq.1
UCSC:uc008rar.2 InParanoid:Q8R4G0 NextBio:350195 Bgee:Q8R4G0
CleanEx:MM_NTNG1 Genevestigator:Q8R4G0
GermOnline:ENSMUSG00000059857 Uniprot:Q8R4G0
Length = 539
Score = 168 (64.2 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 55/172 (31%), Positives = 78/172 (45%)
Query: 22 LAQGPDNAGCPS--TCG-CNKLG-STEDACIE--DTEQC-KCKQGVGGLKCDRCEPGYWG 74
+ +G N PS + G C G S + I+ +T C CK G C+ C GY+
Sbjct: 346 IPKGTANTCIPSISSIGNCECFGHSNRCSYIDLLNTVICVSCKHNTRGQHCELCRLGYF- 404
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN 134
S+ D + C++C C+ GS+ + C +G C CK G G KC+ECL N
Sbjct: 405 -RNASAQLDDENVCIECYCNPLGSIHDRCNG-SGFCECKTGTTGPKCDECLPGNSWY--Y 460
Query: 135 GCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSDAYCHITQNFARC 186
GC P + C+ E +++ Q G C + R CP DAY I RC
Sbjct: 461 GCQPNV----CDNE--LLHCQNGGT--CQNNV-RCACP-DAYTGILCEKLRC 502
>UNIPROTKB|F1P4B9 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 EMBL:AADN02005946
EMBL:AADN02005947 EMBL:AADN02005948 EMBL:AADN02005949
EMBL:AADN02005950 IPI:IPI00810572 Ensembl:ENSGALT00000018614
ArrayExpress:F1P4B9 Uniprot:F1P4B9
Length = 551
Score = 168 (64.2 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 50/153 (32%), Positives = 61/153 (39%)
Query: 15 CCP-DNKTLAQGPDN-AGCPSTCGCNKLGSTEDACIEDTEQ-----------C-KCKQGV 60
C P N Q D G P C K D C D + C C+
Sbjct: 240 CAPLYNDRPWQAADGKTGAPRECQSCKCNGHADTCHFDMDAWLASGNRSGGVCDNCQHNT 299
Query: 61 GGLKCDRCEPGYW-GLSKISSYAPDIDGCLKCGCSQFGSV------REDCEQMTGRCVCK 113
G C RC+PG++ L K S APD C C C GS R C+ TG C CK
Sbjct: 300 EGQHCQRCKPGFYRDLRKPFS-APD--ACKPCSCHPLGSAALPLGPRTFCDPSTGDCPCK 356
Query: 114 PGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCN 146
PGV G +C+ CL G +GC P + C+
Sbjct: 357 PGVAGPRCDRCLPGYWGFGTSGCRPCDCARSCH 389
Score = 136 (52.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 37/115 (32%), Positives = 46/115 (40%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGST------EDACIEDTEQCK 55
G + + C +Y D + PD C C C+ LGS C T C
Sbjct: 301 GQHCQRCKPGFYR---DLRKPFSAPD--AC-KPCSCHPLGSAALPLGPRTFCDPSTGDCP 354
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRC 110
CK GV G +CDRC PGYWG GC C C++ C +TG C
Sbjct: 355 CKPGVAGPRCDRCLPGYWGFGT--------SGCRPCDCAR------SCHPLTGDC 395
>MGI|MGI:96257 [details] [associations]
symbol:Hspg2 "perlecan (heparan sulfate proteoglycan 2)"
species:10090 "Mus musculus" [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IMP]
[GO:0002062 "chondrocyte differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0007420 "brain development" evidence=IMP]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008104
"protein localization" evidence=IMP] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0031012 "extracellular
matrix" evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IMP]
[GO:0048738 "cardiac muscle tissue development" evidence=IMP]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IMP] [GO:0070062 "extracellular vesicular
exosome" evidence=ISO] Reactome:REACT_112621 InterPro:IPR000742
InterPro:IPR002172 InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057
PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181
SMART:SM00192 MGI:MGI:96257 GO:GO:0008104 GO:GO:0007420
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0030198 GO:GO:0001525 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0048738 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186
Reactome:REACT_118324 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 InterPro:IPR002049
InterPro:IPR001791 InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 SMART:SM00200 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024 GO:GO:0005796
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704 GO:GO:0002062
GO:GO:0001958 Pfam:PF02210 GO:GO:0060351 InterPro:IPR018031
InterPro:IPR000034 Pfam:PF00052 SMART:SM00281 PROSITE:PS51115
PDB:1GL4 PDBsum:1GL4 CTD:3339 eggNOG:NOG258321 HOGENOM:HOG000049276
HOVERGEN:HBG008174 KO:K06255 EMBL:M77174 EMBL:J04054 EMBL:J04055
IPI:IPI00113824 PIR:S18252 RefSeq:NP_032331.2 UniGene:Mm.273662
ProteinModelPortal:Q05793 SMR:Q05793 IntAct:Q05793 MINT:MINT-215413
STRING:Q05793 PhosphoSite:Q05793 PaxDb:Q05793 PRIDE:Q05793
GeneID:15530 KEGG:mmu:15530 EvolutionaryTrace:Q05793 NextBio:288458
CleanEx:MM_HSPG2 Genevestigator:Q05793
GermOnline:ENSMUSG00000028763 Uniprot:Q05793
Length = 3707
Score = 165 (63.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 45/136 (33%), Positives = 57/136 (41%)
Query: 15 CCPDNKTLAQGPDNAGC-PSTC-GCNKLGSTEDACIEDTE---QC-KCKQGVGGLKCDRC 68
C P AQ C P C G G C DT+ C C G G C+RC
Sbjct: 1190 CQPGYYGDAQRGTPQDCQPCPCYGAPAAGQAAHTCFLDTDGHPTCDSCSPGHSGRHCERC 1249
Query: 69 EPGYWGL-SKISSYAPD--IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECL 125
PGY+G S+ D + L CGC GS+ C+ G+C CK V+G C+ C
Sbjct: 1250 APGYYGNPSQGQPCHRDGQVPEVLGCGCDPHGSISSQCDA-AGQCQCKAQVEGRSCSHCR 1308
Query: 126 DPNKKLG---PNGCMP 138
+ L P GC+P
Sbjct: 1309 PHHFHLSASNPEGCLP 1324
Score = 121 (47.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 43/145 (29%), Positives = 57/145 (39%)
Query: 7 SCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKC 65
SC D C P G C C CN G + D C +T C +C+ G C
Sbjct: 1540 SCQD----CAPGYTRTGSGLYLGQC-ELCECN--GHS-DLCHPETGACSRCQHNTAGEFC 1591
Query: 66 DRCEPGYWGLSKISSYAPDIDGCLKCGC---SQFGSVREDCEQM-TG--RCV-CKPGVKG 118
+ C GY+G ++ P+ C C C + CE + G RC C+PG G
Sbjct: 1592 ELCATGYYG--DATAGTPE--DCQPCACPLTNPENMFSRTCESLGAGGYRCTACEPGYTG 1647
Query: 119 SKCNECL-----DPNKKLGPNGCMP 138
C +C DPN + G C P
Sbjct: 1648 QYCEQCAPGYEGDPNVQGGR--CQP 1670
Score = 119 (46.9 bits), Expect = 0.00052, P = 0.00052
Identities = 41/142 (28%), Positives = 59/142 (41%)
Query: 16 CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGYWG 74
C + T G G S C CN S+ C C C+ G +CD+C+PG++G
Sbjct: 745 CDAHFTRVPGGPYLGTCSGCNCNGHASS---CDPVYGHCLNCQHNTEGPQCDKCKPGFFG 801
Query: 75 -LSKISSYAPDIDGCLKCGCSQFGSVR---EDCEQMT-GR--C-VCKPGVKGSKCNECLD 126
+K ++ A C C C + R + C T G+ C C PG G +C C
Sbjct: 802 DATKATATA-----CRPCPCPYIDASRRFSDTCFLDTDGQATCDACAPGYTGRRCESCA- 855
Query: 127 PNKKLGPNGCMPGMEVKPCNGE 148
P + P PG + +P E
Sbjct: 856 PGYEGNP--IQPGGKCRPTTQE 875
Score = 119 (46.9 bits), Expect = 0.00052, P = 0.00052
Identities = 46/164 (28%), Positives = 61/164 (37%)
Query: 34 TCG-CNKLGSTEDACIEDTEQCK-CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKC 91
TC CN G +E C +T C+ C+ G C++C+PGY+G ++ + D C
Sbjct: 1155 TCERCNCHGHSE-TCEPETGACQSCQHHTEGASCEQCQPGYYGDAQRGT-PQDCQPCPCY 1212
Query: 92 GCSQFGSVREDCEQMT-GR--C-VCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNG 147
G G C T G C C PG G C C PG P G
Sbjct: 1213 GAPAAGQAAHTCFLDTDGHPTCDSCSPGHSGRHCERCA------------PGYYGNPSQG 1260
Query: 148 EPPVINLQTGVELDCGS---GANREDCPSDAYCHI-TQNFARCC 187
+P + Q L CG G+ C + C Q R C
Sbjct: 1261 QPCHRDGQVPEVLGCGCDPHGSISSQCDAAGQCQCKAQVEGRSC 1304
Score = 118 (46.6 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 32/96 (33%), Positives = 43/96 (44%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAG-CPST--CGCNKLGSTEDACIEDTEQCKCK 57
SG + + C +YG N + Q G P CGC+ GS C + QC+CK
Sbjct: 1242 SGRHCERCAPGYYG----NPSQGQPCHRDGQVPEVLGCGCDPHGSISSQC-DAAGQCQCK 1296
Query: 58 QGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
V G C C P ++ LS A + +GCL C C
Sbjct: 1297 AQVEGRSCSHCRPHHFHLS-----ASNPEGCLPCFC 1327
Score = 118 (46.6 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 35/115 (30%), Positives = 49/115 (42%)
Query: 35 CGCNKLGSTE---DACIEDTE---QCK-CKQGVGGLKCDRCEPGYWG--LSKISSYAPDI 85
C C + ++ D C DT+ C C G G +C+ C PGY G + P
Sbjct: 814 CPCPYIDASRRFSDTCFLDTDGQATCDACAPGYTGRRCESCAPGYEGNPIQPGGKCRPTT 873
Query: 86 DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPN---KKLGPNGCM 137
++C + GS+ E C CK V G CNEC D + K P+GC+
Sbjct: 874 QEIVRC--DERGSLGTSGET----CRCKNNVVGRLCNECSDGSFHLSKQNPDGCL 922
Score = 118 (46.6 bits), Expect = 0.00071, P = 0.00071
Identities = 33/106 (31%), Positives = 46/106 (43%)
Query: 50 DTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGR 109
+ EQC C G G C C+ GY +++ S + C +C C E CE TG
Sbjct: 1122 EVEQCTCPPGYRGPSCQDCDTGY---TRVPS-GLYLGTCERCNCHGHS---ETCEPETGA 1174
Query: 110 CV-CKPGVKGSKCNECLDP----NKKLG-PNGCMPGMEVKPCNGEP 149
C C+ +G+ C +C P + + G P C P PC G P
Sbjct: 1175 CQSCQHHTEGASCEQC-QPGYYGDAQRGTPQDCQPC----PCYGAP 1215
Score = 92 (37.4 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 20/42 (47%), Positives = 24/42 (57%)
Query: 52 EQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
E C+CK V G C+ C G + LSK + PD GCLKC C
Sbjct: 890 ETCRCKNNVVGRLCNECSDGSFHLSKQN---PD--GCLKCFC 926
Score = 85 (35.0 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 23/80 (28%), Positives = 32/80 (40%)
Query: 101 EDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGM-EVKPCNGEPPVINLQTGVE 159
+D + +C C PG +G C +C D P+G G E C+G +TG
Sbjct: 1117 QDSAREVEQCTCPPGYRGPSCQDC-DTGYTRVPSGLYLGTCERCNCHGHSETCEPETGAC 1175
Query: 160 LDCG---SGANREDCPSDAY 176
C GA+ E C Y
Sbjct: 1176 QSCQHHTEGASCEQCQPGYY 1195
Score = 75 (31.5 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 17/62 (27%), Positives = 24/62 (38%)
Query: 110 CVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANRE 169
C C PG G C +C + G + E+ CNG + + +TG C E
Sbjct: 1530 CRCPPGYVGLSCQDCAPGYTRTGSGLYLGQCELCECNGHSDLCHPETGACSRCQHNTAGE 1589
Query: 170 DC 171
C
Sbjct: 1590 FC 1591
Score = 52 (23.4 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 109 RCVCKPGVKGSKCNE 123
RC+C PG G +C +
Sbjct: 3480 RCLCLPGFSGPRCQQ 3494
Score = 46 (21.3 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 109 RCVCKPGVKGSKCNECLDPNKKLGPNGCMPG 139
+C+C+ G KG C +P + P C+ G
Sbjct: 3445 QCLCQDGFKGDLCEHEENPCQLHEP--CLNG 3473
Score = 44 (20.5 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 132 GPNGCMPGMEVKPCN-GEPPVINLQTGVELDCGSGANREDCPS 173
G GC+ + + G PP L ++ +GAN CPS
Sbjct: 3667 GITGCIKNLVLHTARPGAPPPQPLD--LQHRAQAGANTRPCPS 3707
Score = 41 (19.5 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 132 GPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANR 168
GP+ +EV+ C P + L DC G R
Sbjct: 1517 GPSSGPRALEVEECRCPPGYVGLSCQ---DCAPGYTR 1550
Score = 41 (19.5 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN 122
C C Q G +D E + CVC G + N
Sbjct: 3166 CQDRPC-QNGGQCQDSESSSYTCVCPAGFTAAAVN 3199
>UNIPROTKB|F1P4C0 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0043237
"laminin-1 binding" evidence=IEA] [GO:0060668 "regulation of
branching involved in salivary gland morphogenesis by extracellular
matrix-epithelial cell signaling" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 OMA:RSQDFGK GO:GO:0060668
EMBL:AADN02005946 EMBL:AADN02005947 EMBL:AADN02005948
EMBL:AADN02005949 EMBL:AADN02005950 IPI:IPI00573187
Ensembl:ENSGALT00000018613 ArrayExpress:F1P4C0 Uniprot:F1P4C0
Length = 603
Score = 168 (64.2 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 50/153 (32%), Positives = 61/153 (39%)
Query: 15 CCP-DNKTLAQGPDN-AGCPSTCGCNKLGSTEDACIEDTEQ-----------C-KCKQGV 60
C P N Q D G P C K D C D + C C+
Sbjct: 281 CAPLYNDRPWQAADGKTGAPRECQSCKCNGHADTCHFDMDAWLASGNRSGGVCDNCQHNT 340
Query: 61 GGLKCDRCEPGYW-GLSKISSYAPDIDGCLKCGCSQFGSV------REDCEQMTGRCVCK 113
G C RC+PG++ L K S APD C C C GS R C+ TG C CK
Sbjct: 341 EGQHCQRCKPGFYRDLRKPFS-APD--ACKPCSCHPLGSAALPLGPRTFCDPSTGDCPCK 397
Query: 114 PGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCN 146
PGV G +C+ CL G +GC P + C+
Sbjct: 398 PGVAGPRCDRCLPGYWGFGTSGCRPCDCARSCH 430
Score = 140 (54.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 41/130 (31%), Positives = 50/130 (38%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGST------EDACIEDTEQCK 55
G + + C +Y D + PD C C C+ LGS C T C
Sbjct: 342 GQHCQRCKPGFYR---DLRKPFSAPD--AC-KPCSCHPLGSAALPLGPRTFCDPSTGDCP 395
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
CK GV G +CDRC PGYWG GC C C++ C +TG C
Sbjct: 396 CKPGVAGPRCDRCLPGYWGFGT--------SGCRPCDCAR------SCHPLTGDCHSSSS 441
Query: 116 VKGSKCNECL 125
V S E L
Sbjct: 442 VDASWQQEVL 451
>UNIPROTKB|F1LX88 [details] [associations]
symbol:Ntng1 "Protein Ntng1" species:10116 "Rattus
norvegicus" [GO:0007409 "axonogenesis" evidence=IEA] [GO:0046658
"anchored to plasma membrane" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 RGD:1563465 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 IPI:IPI00559428 ProteinModelPortal:F1LX88
Ensembl:ENSRNOT00000043455 ArrayExpress:F1LX88 Uniprot:F1LX88
Length = 401
Score = 164 (62.8 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 54/166 (32%), Positives = 73/166 (43%)
Query: 35 CGCNKLGSTEDACIEDTEQ--CKCKQGVGGLKCDRCEPGYWGLS-KISSYAPDIDG---- 87
C CN L +T C+ D + C+C+ G C +C+ Y G SY P G
Sbjct: 215 CKCN-LHAT--MCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANT 271
Query: 88 CL-------KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGM 140
C+ KC C+ GS+ + C +G C CK G G KC+ECL N GC P +
Sbjct: 272 CIPSISSIGKCYCNPLGSIHDRCNG-SGFCECKTGTTGPKCDECLPGNSWY--YGCQPNV 328
Query: 141 EVKPCNGEPPVINLQTGVELDCGSGANREDCPSDAYCHITQNFARC 186
C+ E +++ Q G C + R CP DAY I RC
Sbjct: 329 ----CDNE--LLHCQNGGT--CHNNV-RCVCP-DAYTGILCEKLRC 364
>UNIPROTKB|F1LXY9 [details] [associations]
symbol:Lama2 "Protein Lama2" species:10116 "Rattus
norvegicus" [GO:0005605 "basal lamina" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] RGD:1308889 GO:GO:0007411 GO:GO:0042383
GO:GO:0005605 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0032224 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
IPI:IPI00781912 Ensembl:ENSRNOT00000061512 ArrayExpress:F1LXY9
Uniprot:F1LXY9
Length = 661
Score = 167 (63.8 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 43/133 (32%), Positives = 58/133 (43%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ------- 53
+GI ++C+D ++ + P C C+ GS + CI+D +
Sbjct: 348 AGINCETCIDGFF------RPKGVSPSYPRPCQPCHCDPAGSLSEVCIKDEKHTRRGLKP 401
Query: 54 --CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV 111
C CK G GG+ CDRC GY G Y PD C C CS GS +D G C
Sbjct: 402 GSCYCKPGFGGMNCDRCVRGYRG------Y-PD---CQPCNCSGLGSTNQD--PCIGPCS 449
Query: 112 CKPGVKGSKCNEC 124
CK V+G C+ C
Sbjct: 450 CKENVEGEDCSHC 462
>UNIPROTKB|F1PR66 [details] [associations]
symbol:LAMA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
GO:GO:0005606 OMA:QLDDYNA EMBL:AAEX03008620
Ensembl:ENSCAFT00000006483 Uniprot:F1PR66
Length = 1760
Score = 152 (58.6 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 38/130 (29%), Positives = 58/130 (44%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE--QCKCKQ 58
+G + + CLD + G D+ +GP P C + + ++C +C CK+
Sbjct: 49 TGEHCEKCLDGYIG---DS---IRGPPRFCQPCPCPLPYVANFAESCYRKNGAVRCICKE 102
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGS---VREDCEQMTGRCV-CKP 114
G C+RC PGY+G + C KC CS + EDC+++TG+C C
Sbjct: 103 NYAGPNCERCAPGYYGNPLLIGST-----CKKCDCSGNSDPNLIFEDCDEVTGQCRNCLR 157
Query: 115 GVKGSKCNEC 124
G KC C
Sbjct: 158 NTTGFKCERC 167
Score = 123 (48.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 31/100 (31%), Positives = 51/100 (51%)
Query: 33 STCG-CNKLGSTE-----DACIEDTEQCK-CKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
STC C+ G+++ + C E T QC+ C + G KC+RC PGY+G ++I+
Sbjct: 125 STCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPGYYGDARIAK----- 179
Query: 86 DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECL 125
C C C G C+ +TG C+ + + C++C+
Sbjct: 180 -NCAVCNCG--GG---PCDSVTGECLEEGFEPPTGCDKCI 213
Score = 115 (45.5 bits), Expect = 0.00076, P = 0.00076
Identities = 50/170 (29%), Positives = 69/170 (40%)
Query: 35 CGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C CN G++ D C++ + C C++ G C++C GY G S I P C C C
Sbjct: 25 CVCN--GNS-DECLDGSGFCVHCQRNTTGEHCEKCLDGYIGDS-IRG-PPRF--CQPCPC 77
Query: 94 S--QFGSVREDCEQMTG--RCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPC---- 145
+ E C + G RC+CK G C C P G N + G K C
Sbjct: 78 PLPYVANFAESCYRKNGAVRCICKENYAGPNCERCA-PGY-YG-NPLLIGSTCKKCDCSG 134
Query: 146 NGEPPVI----NLQTGVELDC---GSGANREDCPSDAY--CHITQNFARC 186
N +P +I + TG +C +G E C Y I +N A C
Sbjct: 135 NSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPGYYGDARIAKNCAVC 184
Score = 45 (20.9 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 170 DCPSDAYCHITQN 182
+ P DAYCH++ +
Sbjct: 1387 NAPRDAYCHLSNS 1399
>UNIPROTKB|F1S575 [details] [associations]
symbol:NTNG2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 OMA:YCECFGH
EMBL:CU179665 EMBL:CU407227 Ensembl:ENSSSCT00000007505
Uniprot:F1S575
Length = 469
Score = 161 (61.7 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 55/172 (31%), Positives = 78/172 (45%)
Query: 22 LAQGPDNAGCPS--TCG-CNKLG-STEDACIE--DTEQC-KCKQGVGGLKCDRCEPGYWG 74
+ +G N PS + G C G S + I+ +T C CK G C+ C GY+
Sbjct: 269 IPKGTANTCIPSISSIGNCECFGHSNRCSYIDLLNTVICVSCKHNTRGQHCELCRLGYF- 327
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN 134
S+ D + C++C C+ GSV + C +G C CK G G KC+ECL N
Sbjct: 328 -RNASAELDDENVCIECYCNPLGSVHDRCNG-SGFCECKTGTTGPKCDECLPGNS--WHY 383
Query: 135 GCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSDAYCHITQNFARC 186
GC P + C+ E +++ Q G C + R CP+ AY I RC
Sbjct: 384 GCQPNV----CDNE--LLHCQNGGT--CHNNV-RCLCPA-AYTGILCEKLRC 425
>UNIPROTKB|Q9Y2I2 [details] [associations]
symbol:NTNG1 "Netrin-G1" species:9606 "Homo sapiens"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0046658 "anchored to plasma
membrane" evidence=ISS] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0007409
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 Orphanet:3095 PDB:3ZYJ
PDBsum:3ZYJ EMBL:AB023193 EMBL:AY358365 EMBL:BX538348 EMBL:AL590427
EMBL:AL513187 EMBL:AC114491 EMBL:BC030220 IPI:IPI00412988
IPI:IPI00412989 IPI:IPI00477903 IPI:IPI00478407 IPI:IPI00478746
IPI:IPI00479203 RefSeq:NP_001106697.1 RefSeq:NP_001106699.1
RefSeq:NP_055732.2 UniGene:Hs.732535 ProteinModelPortal:Q9Y2I2
SMR:Q9Y2I2 STRING:Q9Y2I2 PhosphoSite:Q9Y2I2 DMDM:57015420
PRIDE:Q9Y2I2 DNASU:22854 Ensembl:ENST00000294649
Ensembl:ENST00000370065 Ensembl:ENST00000370066
Ensembl:ENST00000370067 Ensembl:ENST00000370068
Ensembl:ENST00000370071 Ensembl:ENST00000370073
Ensembl:ENST00000370074 Ensembl:ENST00000370076 GeneID:22854
KEGG:hsa:22854 UCSC:uc001dvc.4 UCSC:uc001dvd.1 UCSC:uc001dvf.4
UCSC:uc001dvh.4 CTD:22854 GeneCards:GC01P107682 HGNC:HGNC:23319
MIM:608818 neXtProt:NX_Q9Y2I2 PharmGKB:PA164742200 eggNOG:NOG286598
HOVERGEN:HBG052676 KO:K07522 OMA:YCECFGH ChiTaRS:NTNG1
GenomeRNAi:22854 NextBio:43337 ArrayExpress:Q9Y2I2 Bgee:Q9Y2I2
CleanEx:HS_NTNG1 Genevestigator:Q9Y2I2 GermOnline:ENSG00000162631
Uniprot:Q9Y2I2
Length = 539
Score = 161 (61.7 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 54/172 (31%), Positives = 78/172 (45%)
Query: 22 LAQGPDNAGCPS--TCG-CNKLG-STEDACIE--DTEQC-KCKQGVGGLKCDRCEPGYWG 74
+ +G N PS + G C G S + I+ +T C CK G C+ C GY+
Sbjct: 346 IPKGTANTCIPSISSIGNCECFGHSNRCSYIDLLNTVICVSCKHNTRGQHCELCRLGYF- 404
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN 134
S+ D + C++C C+ GS+ + C +G C CK G G KC+ECL N
Sbjct: 405 -RNASAQLDDENVCIECYCNPLGSIHDRCNG-SGFCECKTGTTGPKCDECLPGNS--WHY 460
Query: 135 GCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSDAYCHITQNFARC 186
GC P + C+ E +++ Q G C + R CP+ AY I RC
Sbjct: 461 GCQPNV----CDNE--LLHCQNGGT--CHNNV-RCLCPA-AYTGILCEKLRC 502
>UNIPROTKB|E1BWU4 [details] [associations]
symbol:E1BWU4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
[GO:0046658 "anchored to plasma membrane" evidence=IEA]
InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
OMA:YCECFGH EMBL:AADN02033768 EMBL:AADN02033769 EMBL:AADN02033770
EMBL:AADN02033771 EMBL:AADN02033772 IPI:IPI00587584
ProteinModelPortal:E1BWU4 Ensembl:ENSGALT00000002932 Uniprot:E1BWU4
Length = 541
Score = 161 (61.7 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 56/174 (32%), Positives = 77/174 (44%)
Query: 22 LAQGPDNAGCPS--TCG-CNKLG-STEDACIE--DTEQC-KCKQGVGGLKCDRCEPGYWG 74
+ +G N PS + G C G S + IE +T C CK G C+ C GY+
Sbjct: 348 IPKGTANICIPSISSIGNCECFGHSNRCSYIELLNTVICVSCKHNTRGQHCELCRLGYF- 406
Query: 75 LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN 134
S+ D + C+ C C+ FGSV + C G C CK G G KC++CL P
Sbjct: 407 -RNASAELDDENVCIDCYCNPFGSVHDRCNDR-GFCECKEGASGPKCDKCL-PGYIWHSL 463
Query: 135 GCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSDAYCHITQNFARCCR 188
GC P + C+ E +++ Q G C + R CP AY I +C R
Sbjct: 464 GCQPNV----CDNE--LLHCQNGGT--CINNV-RCQCPP-AYTGILCEKLKCER 507
Score = 130 (50.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 38/103 (36%), Positives = 43/103 (41%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGY-WGLSKISSYAPDIDGCLKCGC 93
C CN GS D C D C+CK+G G KCD+C PGY W D + L C
Sbjct: 422 CYCNPFGSVHDRC-NDRGFCECKEGASGPKCDKCLPGYIWHSLGCQPNVCDNE-LLHC-- 477
Query: 94 SQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGC 136
Q G C RC C P G C E L + P GC
Sbjct: 478 -QNGGT---CINNV-RCQCPPAYTGILC-EKLKCERD--PGGC 512
>UNIPROTKB|F1MER7 [details] [associations]
symbol:HSPG2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060351 "cartilage development involved in endochondral
bone morphogenesis" evidence=IEA] [GO:0048738 "cardiac muscle
tissue development" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0030198 "extracellular
matrix organization" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0002062 "chondrocyte
differentiation" evidence=IEA] [GO:0001958 "endochondral
ossification" evidence=IEA] InterPro:IPR000742 InterPro:IPR002172
InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026
PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181 SMART:SM00192
GO:GO:0005615 GO:GO:0008104 GO:GO:0007420 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 GO:GO:0030198
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0048738
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209
InterPro:IPR002049 InterPro:IPR001791 InterPro:IPR000082
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
GeneTree:ENSGT00530000063501 InterPro:IPR013098 Pfam:PF07679
GO:GO:0048704 GO:GO:0002062 GO:GO:0001958 Pfam:PF02210
GO:GO:0060351 Pfam:PF12661 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 OMA:GVTQQCA
EMBL:DAAA02006470 EMBL:DAAA02006471 IPI:IPI01000857 IntAct:F1MER7
Ensembl:ENSBTAT00000022744 Uniprot:F1MER7
Length = 4374
Score = 159 (61.0 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 45/137 (32%), Positives = 56/137 (40%)
Query: 15 CCPDNKTLAQGPDNAGC-PSTC-GCNKLGSTEDACIEDTE---QCK-CKQGVGGLKCDRC 68
C P AQ C P C G G C DT+ C C G G C+RC
Sbjct: 1169 CQPGYYGDAQRGTPHDCQPCPCHGAPAAGQATHTCFLDTDGHPTCDACSPGHSGRHCERC 1228
Query: 69 EPGYWGLSKISSYAPDIDGCLK----CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
PGY+G G L CGC GSV C+ G+C CK V+G C++C
Sbjct: 1229 APGYYGNPSQGQPCRRSGGQLPEQIGCGCDPQGSVSNQCDP-AGQCQCKAQVEGLTCSQC 1287
Query: 125 LDPNKKLG---PNGCMP 138
+ L P+GC+P
Sbjct: 1288 RPHHFHLSASNPDGCLP 1304
Score = 136 (52.9 bits), Expect = 8.5e-10, Sum P(3) = 8.5e-10
Identities = 34/97 (35%), Positives = 48/97 (49%)
Query: 1 SGIYLKSCLDSWYGCC----PDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKC 56
SG + + C +YG P ++ Q P+ GC GC+ GS + C + QC+C
Sbjct: 1221 SGRHCERCAPGYYGNPSQGQPCRRSGGQLPEQIGC----GCDPQGSVSNQC-DPAGQCQC 1275
Query: 57 KQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
K V GL C +C P ++ LS A + DGCL C C
Sbjct: 1276 KAQVEGLTCSQCRPHHFHLS-----ASNPDGCLPCFC 1307
Score = 136 (52.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 45/154 (29%), Positives = 62/154 (40%)
Query: 7 SCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKC 65
SC D C P G C C CN G + D C +T C +C+ G C
Sbjct: 1520 SCQD----CAPGYTRTGSGLYLGHC-ELCECN--GHS-DLCHPETGACSQCQHHAAGEFC 1571
Query: 66 DRCEPGYWGLSKISSYAPDIDGCLKCGC---SQFGSVREDCEQM-TG--RCV-CKPGVKG 118
++C PGY+G + A + C C C + CE + G RC C+PG G
Sbjct: 1572 EQCAPGYYG----DATAGTPEDCQPCACPLTNPENMFSRTCESLGAGGYRCTACEPGYTG 1627
Query: 119 SKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVI 152
C +C P PN +PG P + P++
Sbjct: 1628 QYCEQCA-PGYVGNPN--VPGGRCLPQADQAPLV 1658
Score = 120 (47.3 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 34/106 (32%), Positives = 47/106 (44%)
Query: 50 DTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGR 109
+ EQC C G G C C+ GY + Y + C +C C G E CE TG
Sbjct: 1101 EVEQCACPPGYRGPSCQDCDAGYTRMPS-GLY---LGTCERCSCH--GHT-EVCEPETGA 1153
Query: 110 CV-CKPGVKGSKCNECLDP----NKKLG-PNGCMPGMEVKPCNGEP 149
C C+ +G +C +C P + + G P+ C P PC+G P
Sbjct: 1154 CQECQHHTEGPRCEQC-QPGYYGDAQRGTPHDCQPC----PCHGAP 1194
Score = 119 (46.9 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 47/167 (28%), Positives = 64/167 (38%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCK-CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
G C C+ G TE C +T C+ C+ G +C++C+PGY+G ++ + D C
Sbjct: 1133 GTCERCSCH--GHTE-VCEPETGACQECQHHTEGPRCEQCQPGYYGDAQRGT-PHDCQPC 1188
Query: 89 LKCGCSQFGSVREDCEQMT-GR--C-VCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKP 144
G G C T G C C PG G C C P P+ G +
Sbjct: 1189 PCHGAPAAGQATHTCFLDTDGHPTCDACSPGHSGRHCERCA-PGYYGNPS---QGQPCRR 1244
Query: 145 CNGEPPVINLQTGVELDC-GSGANREDCPSDAYCHITQNFARC--CR 188
G+ P Q G D GS +N+ D C C CR
Sbjct: 1245 SGGQLPE---QIGCGCDPQGSVSNQCDPAGQCQCKAQVEGLTCSQCR 1288
Score = 89 (36.4 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 23/57 (40%), Positives = 29/57 (50%)
Query: 37 CNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C++ GST + E C CK V G C+ C G + LS A + DGCLKC C
Sbjct: 858 CDERGSTGSS----GEACLCKNNVVGRLCNECVAGSFHLS-----ARNPDGCLKCFC 905
Score = 87 (35.7 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 29/93 (31%), Positives = 36/93 (38%)
Query: 92 GCSQFGSVREDCEQMTGR----CVCKPGVKGSKCNECLDPNKKLGPNGCMPGM-EVKPCN 146
G S +V ED Q R C C PG +G C +C D P+G G E C+
Sbjct: 1083 GISMDVAVPEDTGQDPAREVEQCACPPGYRGPSCQDC-DAGYTRMPSGLYLGTCERCSCH 1141
Query: 147 GEPPVINLQTGVELDCG---SGANREDCPSDAY 176
G V +TG +C G E C Y
Sbjct: 1142 GHTEVCEPETGACQECQHHTEGPRCEQCQPGYY 1174
Score = 56 (24.8 bits), Expect = 8.5e-10, Sum P(3) = 8.5e-10
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 82 APDIDGCLKCG---CSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
A I C C C Q G +D E + CVC G GS+C
Sbjct: 3822 AHGISHCPTCRDRPC-QNGGQCQDSESSSYVCVCPAGFTGSRC 3863
Score = 48 (22.0 bits), Expect = 5.4e-09, Sum P(3) = 5.4e-09
Identities = 14/56 (25%), Positives = 24/56 (42%)
Query: 84 DIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPG 139
D C + C + G+ + +C+C+ G KG C +P + P C+ G
Sbjct: 4087 DSSPCERQPC-RHGATCMPAGEYEFQCLCRDGFKGDLCEHEENPCQLHEP--CLHG 4139
Score = 46 (21.3 bits), Expect = 8.6e-09, Sum P(3) = 8.6e-09
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 110 CVCKPGVKGSKC 121
C+C PG G +C
Sbjct: 4147 CLCPPGFSGPRC 4158
Score = 44 (20.5 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 132 GPNGCMPGM---EVKPCNGEPPV-INLQTGVELDCGSGANREDCPS 173
G GC+ + +P G PP +++Q + +GAN CPS
Sbjct: 4334 GITGCIKNLVLHSARP-GGPPPQPVDMQHRAQ----AGANTRPCPS 4374
Score = 42 (19.8 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGC 37
C+ Y C + A G D A C T C
Sbjct: 276 CIPKDY-VCDGQEDCADGSDEADCGPTPPC 304
Score = 36 (17.7 bits), Expect = 8.6e-08, Sum P(3) = 8.6e-08
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 122 NECLDPNKKLGPNG 135
N+ L+ N ++ PNG
Sbjct: 3043 NQELEDNVRISPNG 3056
>UNIPROTKB|F1N805 [details] [associations]
symbol:LOC416036 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
EMBL:AADN02014130 EMBL:AADN02014129 IPI:IPI00818986
ProteinModelPortal:F1N805 Ensembl:ENSGALT00000036243
ArrayExpress:F1N805 Uniprot:F1N805
Length = 560
Score = 160 (61.4 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 46/153 (30%), Positives = 60/153 (39%)
Query: 15 CCP--DNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ-----------C-KCKQGV 60
C P +++ G G P+ C + + D+C D C CK
Sbjct: 252 CAPLYNDQPWKPGDGKTGAPNECKKCRCHNHADSCHFDLSVWLASGKRSGGVCDNCKHNT 311
Query: 61 GGLKCDRCEPGYW-GLSKISSYAPDIDGCLKCGCSQFGSVRED------CEQMTGRCVCK 113
G +C RC+PGY+ K S A + C C C GS C TG C CK
Sbjct: 312 EGHRCQRCKPGYYRDRGKPMSSA---EVCKPCSCQPMGSANATFSRSWRCHPKTGFCYCK 368
Query: 114 PGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCN 146
PGV G C+ CL G NGC P + C+
Sbjct: 369 PGVAGPNCDRCLMGYWGFGENGCRPCDCARDCD 401
Score = 130 (50.8 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 30/82 (36%), Positives = 36/82 (43%)
Query: 35 CGCNKLGSTEDA------CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
C C +GS C T C CK GV G CDRC GYWG + +GC
Sbjct: 340 CSCQPMGSANATFSRSWRCHPKTGFCYCKPGVAGPNCDRCLMGYWGFGE--------NGC 391
Query: 89 LKCGCSQFGSVREDCEQMTGRC 110
C C++ DC+Q TG C
Sbjct: 392 RPCDCAR------DCDQHTGNC 407
>UNIPROTKB|F1P486 [details] [associations]
symbol:LOC416036 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 EMBL:AADN02014130
EMBL:AADN02014129 IPI:IPI00581824 Ensembl:ENSGALT00000010226
OMA:NCTATFG ArrayExpress:F1P486 Uniprot:F1P486
Length = 613
Score = 160 (61.4 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 46/153 (30%), Positives = 60/153 (39%)
Query: 15 CCP--DNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ-----------C-KCKQGV 60
C P +++ G G P+ C + + D+C D C CK
Sbjct: 285 CAPLYNDQPWKPGDGKTGAPNECKKCRCHNHADSCHFDLSVWLASGKRSGGVCDNCKHNT 344
Query: 61 GGLKCDRCEPGYW-GLSKISSYAPDIDGCLKCGCSQFGSVRED------CEQMTGRCVCK 113
G +C RC+PGY+ K S A + C C C GS C TG C CK
Sbjct: 345 EGHRCQRCKPGYYRDRGKPMSSA---EVCKPCSCQPMGSANATFSRSWRCHPKTGFCYCK 401
Query: 114 PGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCN 146
PGV G C+ CL G NGC P + C+
Sbjct: 402 PGVAGPNCDRCLMGYWGFGENGCRPCDCARDCD 434
Score = 130 (50.8 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 30/82 (36%), Positives = 36/82 (43%)
Query: 35 CGCNKLGSTEDA------CIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC 88
C C +GS C T C CK GV G CDRC GYWG + +GC
Sbjct: 373 CSCQPMGSANATFSRSWRCHPKTGFCYCKPGVAGPNCDRCLMGYWGFGE--------NGC 424
Query: 89 LKCGCSQFGSVREDCEQMTGRC 110
C C++ DC+Q TG C
Sbjct: 425 RPCDCAR------DCDQHTGNC 440
Score = 40 (19.1 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 109 RCVCKPGVKGSKCNEC 124
+CVCK V GS + C
Sbjct: 490 KCVCKEKVLGSVNDFC 505
>UNIPROTKB|P98160 [details] [associations]
symbol:HSPG2 "Basement membrane-specific heparan sulfate
proteoglycan core protein" species:9606 "Homo sapiens" [GO:0001525
"angiogenesis" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0002062 "chondrocyte differentiation" evidence=IEA] [GO:0005605
"basal lamina" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0048738 "cardiac muscle tissue development" evidence=IEA]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070062 "extracellular vesicular exosome" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005796 "Golgi
lumen" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0006024 "glycosaminoglycan biosynthetic process" evidence=TAS]
[GO:0006027 "glycosaminoglycan catabolic process" evidence=TAS]
[GO:0006629 "lipid metabolic process" evidence=TAS] [GO:0030203
"glycosaminoglycan metabolic process" evidence=TAS] [GO:0030204
"chondroitin sulfate metabolic process" evidence=TAS] [GO:0042157
"lipoprotein metabolic process" evidence=TAS] [GO:0043202
"lysosomal lumen" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0031012 "extracellular matrix" evidence=ISS;IDA]
Reactome:REACT_111217 InterPro:IPR000742 InterPro:IPR002172
InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026
PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181 SMART:SM00192
GO:GO:0005886 Reactome:REACT_116125 GO:GO:0005615 GO:GO:0008104
GO:GO:0007420 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0005975 GO:GO:0070062 InterPro:IPR003598 SMART:SM00408
DrugBank:DB00102 GO:GO:0006629 GO:GO:0030198 GO:GO:0001525
GO:GO:0042157 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0048738
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 GO:GO:0043202
InterPro:IPR002049 InterPro:IPR001791 InterPro:IPR000082
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
GO:GO:0005796 GO:GO:0030204 GO:GO:0006024 GO:GO:0006027
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704 GO:GO:0002062
GO:GO:0001958 Pfam:PF02210 GO:GO:0060351 Pfam:PF12661 EMBL:AL590556
DrugBank:DB00039 InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052
SMART:SM00281 PROSITE:PS51115 EMBL:AL590103 EMBL:M85289 EMBL:X62515
EMBL:L22078 EMBL:AL445795 EMBL:S76436 EMBL:M64283 IPI:IPI00024284
PIR:A38096 RefSeq:NP_005520.4 UniGene:Hs.562227 PDB:3SH4 PDB:3SH5
PDBsum:3SH4 PDBsum:3SH5 ProteinModelPortal:P98160 SMR:P98160
IntAct:P98160 MINT:MINT-123304 STRING:P98160 PhosphoSite:P98160
DMDM:218512120 DOSAC-COBS-2DPAGE:P98160 PaxDb:P98160 PRIDE:P98160
Ensembl:ENST00000374695 GeneID:3339 KEGG:hsa:3339 UCSC:uc001bfj.3
CTD:3339 GeneCards:GC01M022148 H-InvDB:HIX0023554
H-InvDB:HIX0023598 HGNC:HGNC:5273 HPA:CAB009820 HPA:CAB020718
HPA:HPA018892 MIM:142461 MIM:224410 MIM:255800 neXtProt:NX_P98160
Orphanet:1865 Orphanet:800 PharmGKB:PA29537 eggNOG:NOG258321
HOGENOM:HOG000049276 HOVERGEN:HBG008174 InParanoid:P98160 KO:K06255
OMA:GVTQQCA OrthoDB:EOG44QT00 ChiTaRS:HSPG2 GenomeRNAi:3339
NextBio:13216 ArrayExpress:P98160 Bgee:P98160 CleanEx:HS_HSPG2
Genevestigator:P98160 GermOnline:ENSG00000142798 Uniprot:P98160
Length = 4391
Score = 156 (60.0 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 41/119 (34%), Positives = 54/119 (45%)
Query: 31 CPSTC-GCNKLGSTEDACIEDTE---QCK-CKQGVGGLKCDRCEPGYWGL-SKISSYAPD 84
CP C G G C DT+ C C G G C+RC PGY+G S+ D
Sbjct: 1209 CP--CYGDPAAGQAAHTCFLDTDGHPTCDACSPGHSGRHCERCAPGYYGNPSQGQPCQRD 1266
Query: 85 --IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLG---PNGCMP 138
+ G + C C GSV C+ G+C CK V+G C+ C + L P+GC+P
Sbjct: 1267 SQVPGPIGCNCDPQGSVSSQCDA-AGQCQCKAQVEGLTCSHCRPHHFHLSASNPDGCLP 1324
Score = 134 (52.2 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 32/93 (34%), Positives = 41/93 (44%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
SG + + C +YG P Q P C C+ GS C + QC+CK V
Sbjct: 1242 SGRHCERCAPGYYGN-PSQGQPCQRDSQVPGPIGCNCDPQGSVSSQC-DAAGQCQCKAQV 1299
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
GL C C P ++ LS A + DGCL C C
Sbjct: 1300 EGLTCSHCRPHHFHLS-----ASNPDGCLPCFC 1327
Score = 127 (49.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 44/154 (28%), Positives = 62/154 (40%)
Query: 7 SCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKC 65
SC D C P G C C CN G + D C +T C +C+ G C
Sbjct: 1540 SCQD----CAPGYTRTGSGLYLGHC-ELCECN--GHS-DLCHPETGACSQCQHNAAGEFC 1591
Query: 66 DRCEPGYWGLSKISSYAPDIDGCLKCGC---SQFGSVREDCEQM-TG--RCV-CKPGVKG 118
+ C PGY+G + A + C C C + CE + G RC C+PG G
Sbjct: 1592 ELCAPGYYG----DATAGTPEDCQPCACPLTNPENMFSRTCESLGAGGYRCTACEPGYTG 1647
Query: 119 SKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVI 152
C +C P +G N + G + P + P++
Sbjct: 1648 QYCEQC-GPGY-VG-NPSVQGGQCLPETNQAPLV 1678
Score = 121 (47.7 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 31/107 (28%), Positives = 43/107 (40%)
Query: 44 EDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDC 103
+D +E EQC C G G C C+ GY Y + C +C C E C
Sbjct: 1117 QDPALE-VEQCSCPPGYRGPSCQDCDTGYTRTPS-GLY---LGTCERCSCHGHS---EAC 1168
Query: 104 EQMTGRCV-CKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEP 149
E TG C C+ +G +C +C G ++ PC G+P
Sbjct: 1169 EPETGACQGCQHHTEGPRCEQCQPGYYGDAQRGTPQDCQLCPCYGDP 1215
Score = 58 (25.5 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 32/109 (29%), Positives = 43/109 (39%)
Query: 84 DIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC----NECL--DPNKKLGP-NG- 135
D C + C Q G+ + +C+C+ G KG C N C +P G G
Sbjct: 4104 DSSPCERQPC-QHGATCMPAGEYEFQCLCRDGFKGDLCEHEENPCQLREPCLHGGTCQGT 4162
Query: 136 ---CMPGMEVKPCN-GEPPVINLQTGVELDCGSGANREDCPSD--AYCH 178
C+PG C G I ++ L+ GSG N D P AY H
Sbjct: 4163 RCLCLPGFSGPRCQQGSGHGI-AESDWHLE-GSGGN--DAPGQYGAYFH 4207
Score = 54 (24.1 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 16/43 (37%), Positives = 18/43 (41%)
Query: 82 APDIDGCLKCG---CSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
A I C C C Q G D E + CVC G GS+C
Sbjct: 3839 AHGISHCPTCRDRPC-QNGGQCHDSESSSYVCVCPAGFTGSRC 3880
Score = 44 (20.5 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 132 GPNGCMPGMEVKPCN-GEPPVINLQTGVELDCGSGANREDCPS 173
G GC+ + + G PP L ++ +GAN CPS
Sbjct: 4351 GITGCVKNLVLHSARPGAPPPQPLD--LQHRAQAGANTRPCPS 4391
Score = 42 (19.8 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 12/37 (32%), Positives = 15/37 (40%)
Query: 132 GPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANR 168
GP+ +EV+ C P I L DC G R
Sbjct: 1517 GPSNRPRALEVEECRCPPGYIGLSCQ---DCAPGYTR 1550
Score = 39 (18.8 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 27 DNAGCPSTCGCNKLGSTEDACIEDTEQC 54
D A CP+ G T+ C+ T C
Sbjct: 355 DEANCPTKRPEEVCGPTQFRCVS-TNMC 381
>UNIPROTKB|G5E6L9 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 EMBL:DAAA02047467
Ensembl:ENSBTAT00000063836 Uniprot:G5E6L9
Length = 446
Score = 141 (54.7 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 31/99 (31%), Positives = 41/99 (41%)
Query: 29 AGCPSTCGCNKLGSTEDACIEDTE-QCKCKQGVGGLKCDRCEPGY--WGLSKISSYAPDI 85
AG C C+ G D +C+C+ G C+ C+P + W + P
Sbjct: 171 AGVRGRCQCH--GHAARCAARDRPPRCRCRHHTTGPGCESCQPSHRDWPWRPATPRHPH- 227
Query: 86 DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
CL C C G+ C Q G+C CK GV G CN C
Sbjct: 228 -PCLPCQCHPIGATGGACNQTNGQCSCKLGVTGLTCNRC 265
Score = 121 (47.7 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 20/38 (52%), Positives = 25/38 (65%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGY 72
C C+ +G+T AC + QC CK GV GL C+RC PGY
Sbjct: 232 CQCHPIGATGGACNQTNGQCSCKLGVTGLTCNRCGPGY 269
Score = 36 (17.7 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 10/22 (45%), Positives = 10/22 (45%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCG 36
C P LA G A CP CG
Sbjct: 49 CLPPVTQLA-GMA-ASCPQACG 68
>WB|WBGene00006746 [details] [associations]
symbol:unc-6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040011
"locomotion" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0008078 "mesodermal cell migration" evidence=IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI;IMP] [GO:0030334
"regulation of cell migration" evidence=IGI;IMP] [GO:0035262 "gonad
morphogenesis" evidence=IGI;IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] [GO:0005102
"receptor binding" evidence=ISS] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0031175 "neuron projection development"
evidence=IMP] Reactome:REACT_86739 InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005737 GO:GO:0030424 GO:GO:0005102
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334 GO:GO:0008045
GO:GO:0030163 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0008078 InterPro:IPR018933 Pfam:PF01759
GO:GO:0035262 SMART:SM00643 GO:GO:0033563 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 KO:K06843
eggNOG:NOG244580 HOGENOM:HOG000286017 CTD:180961
GeneTree:ENSGT00700000104042 EMBL:M80241 EMBL:FO080932 PIR:JH0799
RefSeq:NP_509165.1 ProteinModelPortal:P34710 SMR:P34710
DIP:DIP-24693N MINT:MINT-1057956 STRING:P34710 PaxDb:P34710
EnsemblMetazoa:F41C6.1.1 EnsemblMetazoa:F41C6.1.2 GeneID:180961
KEGG:cel:CELE_F41C6.1 UCSC:F41C6.1.1 WormBase:F41C6.1
InParanoid:P34710 OMA:RAHPASY NextBio:911748 Uniprot:P34710
Length = 612
Score = 158 (60.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 27/69 (39%), Positives = 36/69 (52%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
C+ G C C+PG+ + S C CGC GS+ + C Q +G+CVCKPG
Sbjct: 377 CRHNTAGRNCHLCKPGF--VRDTSLPMTHRKACKSCGCHPVGSLGKSCNQSSGQCVCKPG 434
Query: 116 VKGSKCNEC 124
V G+ CN C
Sbjct: 435 VTGTTCNRC 443
Score = 114 (45.2 bits), Expect = 0.00029, P = 0.00029
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGY 72
C S CGC+ +GS +C + + QC CK GV G C+RC GY
Sbjct: 407 CKS-CGCHPVGSLGKSCNQSSGQCVCKPGVTGTTCNRCAKGY 447
>UNIPROTKB|P34710 [details] [associations]
symbol:unc-6 "Netrin unc-6" species:6239 "Caenorhabditis
elegans" [GO:0005576 "extracellular region" evidence=TAS]
Reactome:REACT_86739 InterPro:IPR001134 PROSITE:PS50189
GO:GO:0005737 GO:GO:0030424 GO:GO:0005102 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0030334 GO:GO:0008045 GO:GO:0030163
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
GO:GO:0008078 InterPro:IPR018933 Pfam:PF01759 GO:GO:0035262
SMART:SM00643 GO:GO:0033563 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 KO:K06843 eggNOG:NOG244580
HOGENOM:HOG000286017 CTD:180961 GeneTree:ENSGT00700000104042
EMBL:M80241 EMBL:FO080932 PIR:JH0799 RefSeq:NP_509165.1
ProteinModelPortal:P34710 SMR:P34710 DIP:DIP-24693N
MINT:MINT-1057956 STRING:P34710 PaxDb:P34710
EnsemblMetazoa:F41C6.1.1 EnsemblMetazoa:F41C6.1.2 GeneID:180961
KEGG:cel:CELE_F41C6.1 UCSC:F41C6.1.1 WormBase:F41C6.1
InParanoid:P34710 OMA:RAHPASY NextBio:911748 Uniprot:P34710
Length = 612
Score = 158 (60.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 27/69 (39%), Positives = 36/69 (52%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
C+ G C C+PG+ + S C CGC GS+ + C Q +G+CVCKPG
Sbjct: 377 CRHNTAGRNCHLCKPGF--VRDTSLPMTHRKACKSCGCHPVGSLGKSCNQSSGQCVCKPG 434
Query: 116 VKGSKCNEC 124
V G+ CN C
Sbjct: 435 VTGTTCNRC 443
Score = 114 (45.2 bits), Expect = 0.00029, P = 0.00029
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGY 72
C S CGC+ +GS +C + + QC CK GV G C+RC GY
Sbjct: 407 CKS-CGCHPVGSLGKSCNQSSGQCVCKPGVTGTTCNRCAKGY 447
>UNIPROTKB|G3N1H6 [details] [associations]
symbol:NTNG2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007409 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
InterPro:IPR013111 Pfam:PF07974 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
OMA:QPRCDPA EMBL:DAAA02032274 EMBL:DAAA02032272 EMBL:DAAA02032273
Ensembl:ENSBTAT00000064483 Uniprot:G3N1H6
Length = 595
Score = 156 (60.0 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 45/133 (33%), Positives = 58/133 (43%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPG-YWGLSKISSYAPDIDGCLKCGC 93
C CN++GS D C E T C+C++G G KCD C P YW + D D L C
Sbjct: 474 CNCNQIGSVHDRCNE-TGFCECREGAAGPKCDDCLPTHYWRQGCYPNVCDD-DQLL---C 528
Query: 94 SQFGSVREDCEQMTGRCVCKPGVKGSKCNE--CLDPNKKLGPNGC--MPGMEVKPCNGEP 149
G+ C Q RC C G G++C + C DP G C PG +P
Sbjct: 529 QNGGT----CVQ-NQRCACPRGYTGARCEQPRC-DPADDEGGLDCDRAPGAAPRPATLLG 582
Query: 150 PVINLQTGVELDC 162
++ L LDC
Sbjct: 583 CLLLLGLAARLDC 595
Score = 153 (58.9 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 30/85 (35%), Positives = 43/85 (50%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
CK G C C GY+ S+ D + C++C C+Q GSV + C + TG C C+ G
Sbjct: 441 CKHNTRGQHCQHCRLGYYRNG--SAELDDENVCIECNCNQIGSVHDRCNE-TGFCECREG 497
Query: 116 VKGSKCNECLDPNKKLGPNGCMPGM 140
G KC++CL + GC P +
Sbjct: 498 AAGPKCDDCLPTH--YWRQGCYPNV 520
>UNIPROTKB|Q96CW9 [details] [associations]
symbol:NTNG2 "Netrin-G2" species:9606 "Homo sapiens"
[GO:0046658 "anchored to plasma membrane" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0007409 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0046658 InterPro:IPR013111 Pfam:PF07974
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
PDB:3ZYI PDBsum:3ZYI eggNOG:NOG286598 HOVERGEN:HBG052676
EMBL:AB058760 EMBL:AY358165 EMBL:AL353631 EMBL:AL159997
EMBL:BC013770 IPI:IPI00432766 IPI:IPI00843936 RefSeq:NP_115925.2
UniGene:Hs.163642 PDB:3TBD PDB:3ZYG PDBsum:3TBD PDBsum:3ZYG
ProteinModelPortal:Q96CW9 SMR:Q96CW9 IntAct:Q96CW9 STRING:Q96CW9
PhosphoSite:Q96CW9 DMDM:34922606 PRIDE:Q96CW9
Ensembl:ENST00000372179 Ensembl:ENST00000393229 GeneID:84628
KEGG:hsa:84628 UCSC:uc004cbh.2 CTD:84628 GeneCards:GC09P135037
H-InvDB:HIX0008489 HGNC:HGNC:14288 neXtProt:NX_Q96CW9
PharmGKB:PA134962540 HOGENOM:HOG000231614 KO:K16359
OrthoDB:EOG47D9FR GenomeRNAi:84628 NextBio:74534
ArrayExpress:Q96CW9 Bgee:Q96CW9 CleanEx:HS_NTNG2
Genevestigator:Q96CW9 GermOnline:ENSG00000196358 Uniprot:Q96CW9
Length = 530
Score = 153 (58.9 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 30/85 (35%), Positives = 43/85 (50%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
CK G C C GY+ S+ D + C++C C+Q GSV + C + TG C C+ G
Sbjct: 376 CKHNTRGQHCQHCRLGYYRNG--SAELDDENVCIECNCNQIGSVHDRCNE-TGFCECREG 432
Query: 116 VKGSKCNECLDPNKKLGPNGCMPGM 140
G KC++CL + GC P +
Sbjct: 433 AAGPKCDDCLPTH--YWRQGCYPNV 455
Score = 143 (55.4 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 41/115 (35%), Positives = 51/115 (44%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPG-YWGLSKISSYAPDIDGCLKCGC 93
C CN++GS D C E T C+C++G G KCD C P YW + D D L C
Sbjct: 409 CNCNQIGSVHDRCNE-TGFCECREGAAGPKCDDCLPTHYWRQGCYPNVCDD-DQLL---C 463
Query: 94 SQFGSVREDCEQMTGRCVCKPGVKGSKCNE--CLDPNKKLGPNGC--MPGMEVKP 144
G+ C Q RC C G G +C + C DP G C PG +P
Sbjct: 464 QNGGT----CLQ-NQRCACPRGYTGVRCEQPRC-DPADDDGGLDCDRAPGAAPRP 512
>UNIPROTKB|F1S0U7 [details] [associations]
symbol:NTNG2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007409 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
InterPro:IPR013111 Pfam:PF07974 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
OMA:QPRCDPA EMBL:CU550727 ProteinModelPortal:F1S0U7
Ensembl:ENSSSCT00000006293 Uniprot:F1S0U7
Length = 532
Score = 153 (58.9 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 30/85 (35%), Positives = 43/85 (50%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
CK G C C GY+ S+ D + C++C C+Q GSV + C + TG C C+ G
Sbjct: 378 CKHNTRGQHCQHCRLGYYRNG--SAELDDENVCIECNCNQIGSVHDRCNE-TGFCECREG 434
Query: 116 VKGSKCNECLDPNKKLGPNGCMPGM 140
G KC++CL + GC P +
Sbjct: 435 AAGPKCDDCLPTH--YWRQGCYPNV 457
Score = 146 (56.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 44/133 (33%), Positives = 56/133 (42%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPG-YWGLSKISSYAPDIDGCLKCGC 93
C CN++GS D C E T C+C++G G KCD C P YW + D D L C
Sbjct: 411 CNCNQIGSVHDRCNE-TGFCECREGAAGPKCDDCLPTHYWRQGCYPNVCDD-DQLL---C 465
Query: 94 SQFGSVREDCEQMTGRCVCKPGVKGSKCNE--CLDPNKKLGPNGC--MPGMEVKPCNGEP 149
G+ C Q RC C G G +C + C DP C PG +P
Sbjct: 466 QNGGT----CVQ-NQRCTCPRGYTGVRCEQPRC-DPADDDSGLDCDRAPGAPPRPATLLG 519
Query: 150 PVINLQTGVELDC 162
++ L LDC
Sbjct: 520 CLLLLGLAARLDC 532
>WB|WBGene00000415 [details] [associations]
symbol:ced-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0043652
"engulfment of apoptotic cell" evidence=IMP] [GO:0043654
"recognition of apoptotic cell" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005044 "scavenger receptor activity"
evidence=ISS;IPI] [GO:0030670 "phagocytic vesicle membrane"
evidence=IDA] [GO:0031260 "pseudopodium membrane" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0001891 "phagocytic
cup" evidence=IDA] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 GO:GO:0016021
GO:GO:0006915 GO:GO:0009986 GO:GO:0030670 GO:GO:0042742
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0045184 GO:GO:0031532
GO:GO:0001891 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 HSSP:P46531 GO:GO:0043652 GO:GO:0012501
GO:GO:0034620 InterPro:IPR006212 SMART:SM00261 GO:GO:0005044
HOGENOM:HOG000294130 GO:GO:0001845 EMBL:AF332568 EMBL:AL032657
PIR:T26972 RefSeq:NP_001021772.1 RefSeq:NP_001021773.1
RefSeq:NP_001076621.1 RefSeq:NP_740922.1 UniGene:Cel.7093
ProteinModelPortal:Q9XWD6 SMR:Q9XWD6 IntAct:Q9XWD6 MINT:MINT-223151
STRING:Q9XWD6 PaxDb:Q9XWD6 PRIDE:Q9XWD6 EnsemblMetazoa:Y47H9C.4a
GeneID:173064 KEGG:cel:CELE_Y47H9C.4 UCSC:Y47H9C.4a CTD:173064
WormBase:Y47H9C.4a WormBase:Y47H9C.4b WormBase:Y47H9C.4c
WormBase:Y47H9C.4d GeneTree:ENSGT00690000101691 InParanoid:Q9XWD6
OMA:VYNDTEQ NextBio:878121 GO:GO:0031260 GO:GO:0043654
Uniprot:Q9XWD6
Length = 1111
Score = 157 (60.3 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 57/188 (30%), Positives = 75/188 (39%)
Query: 14 GCCP--DNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR---- 67
GC P T G A C GC + GS C CKC G KCD+
Sbjct: 525 GCDPITGECTCPAGLQGANCD--IGCPE-GSYGPGC---KLHCKCVNG----KCDKETGE 574
Query: 68 --CEPGYWG--LSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN 122
C+PG++G S S + C L C CS C + TG+C+C G KG C+
Sbjct: 575 CTCQPGFFGSDCSTTCSKGKYGESCELSCPCSD-----ASCSKQTGKCLCPLGTKGVSCD 629
Query: 123 ECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGAN----REDCPSDAYCH 178
+ DPN G C + PC P + GV L C G++ +CP+ +Y
Sbjct: 630 QKCDPNT-FGFL-CQETVTPSPCASTDP----KNGVCLSCPPGSSGIHCEHNCPAGSYGD 683
Query: 179 ITQNFARC 186
Q C
Sbjct: 684 GCQQVCSC 691
Score = 149 (57.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 62/193 (32%), Positives = 79/193 (40%)
Query: 4 YLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGL 63
Y+K C D +Y D+ L PD C C K G CIE + C+C G GG
Sbjct: 101 YVKQCCDGYYQT-KDHFCL---PD---CNPPC---KKGK----CIEPGK-CECDPGYGGK 145
Query: 64 KC-DRCEPGYWGLSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
C C G WGL GC K C C G+ +C+ G C+C G +G +C
Sbjct: 146 YCASSCSVGTWGL-----------GCSKSCDCEN-GA---NCDPELGTCICTSGFQGERC 190
Query: 122 NE-CLDPNKKLGPNGCM---PGMEVKPCNGEPP-VINLQTGVEL---DCGSGANREDCPS 173
+ C P+ K GPN C+ P CN E V + G E C G +C
Sbjct: 191 EKPC--PDNKWGPN-CVKSCPCQNGGKCNKEGKCVCSDGWGGEFCLNKCEEGKFGAECKF 247
Query: 174 DAYCHITQNFARC 186
+ C QN A C
Sbjct: 248 ECNC---QNGATC 257
Score = 148 (57.2 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 47/151 (31%), Positives = 63/151 (41%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGC 88
GC C C S C T +C C G G +CD+ CE GY+G PD C
Sbjct: 771 GCRQVCRCT---SEYKQCNAQTGECSCPAGFQGDRCDKPCEDGYYG--------PD---C 816
Query: 89 LK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE-C------LDPNKKLGPNGCMPGM 140
+K C C G+ C +++G C C PG G C+ C L +K+ +GC G
Sbjct: 817 IKKCKCQ--GTATSSCNRVSGACHCHPGFTGEFCHALCPESTFGLKCSKECPKDGCGDGY 874
Query: 141 EVKPCNGEPPVINLQTGV---ELDCGSGANR 168
E G V + G E + +GA R
Sbjct: 875 ECDAAIGCCHVDQMSCGKAKQEFEALNGAGR 905
Score = 142 (55.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 54/175 (30%), Positives = 71/175 (40%)
Query: 16 CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGL 75
C + K A+ A C TC C + + C +T C+CK G G D CE
Sbjct: 366 CDERKCDAE-QYGADCSKTCTCVRENTL--MCAPNTGFCRCKPGFYG---DNCE---LAC 416
Query: 76 SKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE-CLDPNKKLGPN 134
SK SY P+ C K + E C TG CVCKPG G C+E C P GPN
Sbjct: 417 SK-DSYGPN---CEKQAMCDWNHASE-CNPETGSCVCKPGRTGKNCSEPC--PLDFYGPN 469
Query: 135 GCMPGMEVKPCNGEPPVINLQTG-VELDCGSGANR--EDCPSDAYCHITQNFARC 186
C + CN + G + D G +R CP+D + + +C
Sbjct: 470 -CAHQCQ---CNQRGVGCDGADGKCQCDRGWTGHRCEHHCPADTFGANCEKRCKC 520
Score = 141 (54.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 47/162 (29%), Positives = 65/162 (40%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKC-DRCEPGYWGLSKISSYAPDIDGC 88
GC C C + C T +C C+ G G C ++C G +G Y +D C
Sbjct: 684 GCQQVCSC----ADGHGCDPTTGECICEPGYHGKTCSEKCPDGKYG------YGCALD-C 732
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE-CLDPNKKLGPNGCMPGMEVKPCNG 147
KC GS C+ + G C+C G++G+ C C + NGC +V C
Sbjct: 733 PKCAS---GST---CDHINGLCICPAGLEGALCTRPC---SAGFWGNGCR---QVCRCTS 780
Query: 148 EPPVINLQTGVELDCGSGANREDCPSDAYCHITQNFARCCRK 189
E N QTG E C +G + C D C C +K
Sbjct: 781 EYKQCNAQTG-ECSCPAGFQGDRC--DKPCEDGYYGPDCIKK 819
Score = 123 (48.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 35/117 (29%), Positives = 51/117 (43%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCD- 66
C ++G +N+ + G +GC C C L + C + +CKC G G CD
Sbjct: 266 CKSGYHGALCENEC-SVGFFGSGCTQKCDC--LNNQN--CDSSSGECKCI-GWTGKHCDI 319
Query: 67 RCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
C G +GL + C C +F C+ TG+C C+ G KG KC+E
Sbjct: 320 GCSRGRFGLQCKQN-------CT-CPGLEFSDSNASCDAKTGQCQCESGYKGPKCDE 368
Score = 113 (44.8 bits), Expect = 0.00079, P = 0.00079
Identities = 52/167 (31%), Positives = 65/167 (38%)
Query: 31 CPS-TCG--CNKLGSTEDA--CIEDTEQCKCKQGVGGLKCD-RCEPGYWGLSKISSYAPD 84
CP+ T G C K C T +C C G+ G CD C G SY P
Sbjct: 505 CPADTFGANCEKRCKCPKGIGCDPITGECTCPAGLQGANCDIGCPEG--------SYGP- 555
Query: 85 IDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVK 143
GC L C C V C++ TG C C+PG GS C+ K G + C E+
Sbjct: 556 --GCKLHCKC-----VNGKCDKETGECTCQPGFFGSDCSTTCSKGK-YGES-C----ELS 602
Query: 144 -PCNGEPPVINLQTGVELDCGSGANREDCPSDAYCHITQNFARCCRK 189
PC+ + QTG L C G C D C F C++
Sbjct: 603 CPCSDAS--CSKQTGKCL-CPLGTKGVSC--DQKCD-PNTFGFLCQE 643
>UNIPROTKB|Q9XWD6 [details] [associations]
symbol:ced-1 "Cell death abnormality protein 1"
species:6239 "Caenorhabditis elegans" [GO:0001845 "phagolysosome
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IDA;IMP] [GO:0042742 "defense response to bacterium"
evidence=IMP] [GO:0034620 "cellular response to unfolded protein"
evidence=IDA] [GO:0045184 "establishment of protein localization"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031532 "actin cytoskeleton reorganization" evidence=IDA]
[GO:0012501 "programmed cell death" evidence=IMP] [GO:0009986 "cell
surface" evidence=IDA] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 GO:GO:0016021
GO:GO:0006915 GO:GO:0009986 GO:GO:0030670 GO:GO:0042742
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0045184 GO:GO:0031532
GO:GO:0001891 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 HSSP:P46531 GO:GO:0043652 GO:GO:0012501
GO:GO:0034620 InterPro:IPR006212 SMART:SM00261 GO:GO:0005044
HOGENOM:HOG000294130 GO:GO:0001845 EMBL:AF332568 EMBL:AL032657
PIR:T26972 RefSeq:NP_001021772.1 RefSeq:NP_001021773.1
RefSeq:NP_001076621.1 RefSeq:NP_740922.1 UniGene:Cel.7093
ProteinModelPortal:Q9XWD6 SMR:Q9XWD6 IntAct:Q9XWD6 MINT:MINT-223151
STRING:Q9XWD6 PaxDb:Q9XWD6 PRIDE:Q9XWD6 EnsemblMetazoa:Y47H9C.4a
GeneID:173064 KEGG:cel:CELE_Y47H9C.4 UCSC:Y47H9C.4a CTD:173064
WormBase:Y47H9C.4a WormBase:Y47H9C.4b WormBase:Y47H9C.4c
WormBase:Y47H9C.4d GeneTree:ENSGT00690000101691 InParanoid:Q9XWD6
OMA:VYNDTEQ NextBio:878121 GO:GO:0031260 GO:GO:0043654
Uniprot:Q9XWD6
Length = 1111
Score = 157 (60.3 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 57/188 (30%), Positives = 75/188 (39%)
Query: 14 GCCP--DNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR---- 67
GC P T G A C GC + GS C CKC G KCD+
Sbjct: 525 GCDPITGECTCPAGLQGANCD--IGCPE-GSYGPGC---KLHCKCVNG----KCDKETGE 574
Query: 68 --CEPGYWG--LSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN 122
C+PG++G S S + C L C CS C + TG+C+C G KG C+
Sbjct: 575 CTCQPGFFGSDCSTTCSKGKYGESCELSCPCSD-----ASCSKQTGKCLCPLGTKGVSCD 629
Query: 123 ECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGAN----REDCPSDAYCH 178
+ DPN G C + PC P + GV L C G++ +CP+ +Y
Sbjct: 630 QKCDPNT-FGFL-CQETVTPSPCASTDP----KNGVCLSCPPGSSGIHCEHNCPAGSYGD 683
Query: 179 ITQNFARC 186
Q C
Sbjct: 684 GCQQVCSC 691
Score = 149 (57.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 62/193 (32%), Positives = 79/193 (40%)
Query: 4 YLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGL 63
Y+K C D +Y D+ L PD C C K G CIE + C+C G GG
Sbjct: 101 YVKQCCDGYYQT-KDHFCL---PD---CNPPC---KKGK----CIEPGK-CECDPGYGGK 145
Query: 64 KC-DRCEPGYWGLSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
C C G WGL GC K C C G+ +C+ G C+C G +G +C
Sbjct: 146 YCASSCSVGTWGL-----------GCSKSCDCEN-GA---NCDPELGTCICTSGFQGERC 190
Query: 122 NE-CLDPNKKLGPNGCM---PGMEVKPCNGEPP-VINLQTGVEL---DCGSGANREDCPS 173
+ C P+ K GPN C+ P CN E V + G E C G +C
Sbjct: 191 EKPC--PDNKWGPN-CVKSCPCQNGGKCNKEGKCVCSDGWGGEFCLNKCEEGKFGAECKF 247
Query: 174 DAYCHITQNFARC 186
+ C QN A C
Sbjct: 248 ECNC---QNGATC 257
Score = 148 (57.2 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 47/151 (31%), Positives = 63/151 (41%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGC 88
GC C C S C T +C C G G +CD+ CE GY+G PD C
Sbjct: 771 GCRQVCRCT---SEYKQCNAQTGECSCPAGFQGDRCDKPCEDGYYG--------PD---C 816
Query: 89 LK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE-C------LDPNKKLGPNGCMPGM 140
+K C C G+ C +++G C C PG G C+ C L +K+ +GC G
Sbjct: 817 IKKCKCQ--GTATSSCNRVSGACHCHPGFTGEFCHALCPESTFGLKCSKECPKDGCGDGY 874
Query: 141 EVKPCNGEPPVINLQTGV---ELDCGSGANR 168
E G V + G E + +GA R
Sbjct: 875 ECDAAIGCCHVDQMSCGKAKQEFEALNGAGR 905
Score = 142 (55.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 54/175 (30%), Positives = 71/175 (40%)
Query: 16 CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGL 75
C + K A+ A C TC C + + C +T C+CK G G D CE
Sbjct: 366 CDERKCDAE-QYGADCSKTCTCVRENTL--MCAPNTGFCRCKPGFYG---DNCE---LAC 416
Query: 76 SKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE-CLDPNKKLGPN 134
SK SY P+ C K + E C TG CVCKPG G C+E C P GPN
Sbjct: 417 SK-DSYGPN---CEKQAMCDWNHASE-CNPETGSCVCKPGRTGKNCSEPC--PLDFYGPN 469
Query: 135 GCMPGMEVKPCNGEPPVINLQTG-VELDCGSGANR--EDCPSDAYCHITQNFARC 186
C + CN + G + D G +R CP+D + + +C
Sbjct: 470 -CAHQCQ---CNQRGVGCDGADGKCQCDRGWTGHRCEHHCPADTFGANCEKRCKC 520
Score = 141 (54.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 47/162 (29%), Positives = 65/162 (40%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKC-DRCEPGYWGLSKISSYAPDIDGC 88
GC C C + C T +C C+ G G C ++C G +G Y +D C
Sbjct: 684 GCQQVCSC----ADGHGCDPTTGECICEPGYHGKTCSEKCPDGKYG------YGCALD-C 732
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE-CLDPNKKLGPNGCMPGMEVKPCNG 147
KC GS C+ + G C+C G++G+ C C + NGC +V C
Sbjct: 733 PKCAS---GST---CDHINGLCICPAGLEGALCTRPC---SAGFWGNGCR---QVCRCTS 780
Query: 148 EPPVINLQTGVELDCGSGANREDCPSDAYCHITQNFARCCRK 189
E N QTG E C +G + C D C C +K
Sbjct: 781 EYKQCNAQTG-ECSCPAGFQGDRC--DKPCEDGYYGPDCIKK 819
Score = 123 (48.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 35/117 (29%), Positives = 51/117 (43%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCD- 66
C ++G +N+ + G +GC C C L + C + +CKC G G CD
Sbjct: 266 CKSGYHGALCENEC-SVGFFGSGCTQKCDC--LNNQN--CDSSSGECKCI-GWTGKHCDI 319
Query: 67 RCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
C G +GL + C C +F C+ TG+C C+ G KG KC+E
Sbjct: 320 GCSRGRFGLQCKQN-------CT-CPGLEFSDSNASCDAKTGQCQCESGYKGPKCDE 368
Score = 113 (44.8 bits), Expect = 0.00079, P = 0.00079
Identities = 52/167 (31%), Positives = 65/167 (38%)
Query: 31 CPS-TCG--CNKLGSTEDA--CIEDTEQCKCKQGVGGLKCD-RCEPGYWGLSKISSYAPD 84
CP+ T G C K C T +C C G+ G CD C G SY P
Sbjct: 505 CPADTFGANCEKRCKCPKGIGCDPITGECTCPAGLQGANCDIGCPEG--------SYGP- 555
Query: 85 IDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVK 143
GC L C C V C++ TG C C+PG GS C+ K G + C E+
Sbjct: 556 --GCKLHCKC-----VNGKCDKETGECTCQPGFFGSDCSTTCSKGK-YGES-C----ELS 602
Query: 144 -PCNGEPPVINLQTGVELDCGSGANREDCPSDAYCHITQNFARCCRK 189
PC+ + QTG L C G C D C F C++
Sbjct: 603 CPCSDAS--CSKQTGKCL-CPLGTKGVSC--DQKCD-PNTFGFLCQE 643
>MGI|MGI:2159341 [details] [associations]
symbol:Ntng2 "netrin G2" species:10090 "Mus musculus"
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031225
"anchored to membrane" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IDA] InterPro:IPR000742 Pfam:PF00008
PROSITE:PS50026 SMART:SM00181 MGI:MGI:2159341 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0007409 PROSITE:PS01186 EMBL:CH466542
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0046658 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
eggNOG:NOG286598 HOVERGEN:HBG052676 CTD:84628 HOGENOM:HOG000231614
KO:K16359 OrthoDB:EOG47D9FR EMBL:AB052336 EMBL:AB052337
EMBL:AB052338 EMBL:AF475079 EMBL:AF475080 EMBL:AL772379
IPI:IPI00311068 IPI:IPI00311069 IPI:IPI00625609 RefSeq:NP_598007.1
RefSeq:NP_598008.1 UniGene:Mm.442448 ProteinModelPortal:Q8R4F1
SMR:Q8R4F1 STRING:Q8R4F1 PRIDE:Q8R4F1 Ensembl:ENSMUST00000048455
Ensembl:ENSMUST00000091153 Ensembl:ENSMUST00000102873 GeneID:171171
KEGG:mmu:171171 InParanoid:A2AKX0 OMA:QPRCDPA ChiTaRS:NTNG2
NextBio:370580 Bgee:Q8R4F1 CleanEx:MM_NTNG2 Genevestigator:Q8R4F1
GermOnline:ENSMUSG00000035513 Uniprot:Q8R4F1
Length = 589
Score = 153 (58.9 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 42/115 (36%), Positives = 55/115 (47%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPG-YWGLSKISSYAPDIDGCLKCGC 93
C CN++GS D C E T C+C++G G KCD C P YW + D D L C
Sbjct: 469 CNCNQIGSVHDRCNE-TGFCECREGAVGPKCDDCLPTHYWRQGCYPNVCDD-DQLL---C 523
Query: 94 SQFGSVREDCEQMTGRCVCKPGVKGSKCNE--CLDPNKKLGPNGC--MPGMEVKP 144
G+ C+Q RC C PG G +C + C D GP+ C PG+ +P
Sbjct: 524 QNGGT----CQQ-NQRCACPPGYTGIRCEQPRC-DLADDAGPD-CDRAPGIVPRP 571
Score = 152 (58.6 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 30/85 (35%), Positives = 43/85 (50%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
CK G C C GY+ S+ D + C++C C+Q GSV + C + TG C C+ G
Sbjct: 436 CKHNTRGQHCQHCRLGYYRNG--SAELDDENVCIECNCNQIGSVHDRCNE-TGFCECREG 492
Query: 116 VKGSKCNECLDPNKKLGPNGCMPGM 140
G KC++CL + GC P +
Sbjct: 493 AVGPKCDDCLPTH--YWRQGCYPNV 515
>UNIPROTKB|E5RFQ2 [details] [associations]
symbol:LAMA4 "Laminin subunit alpha-4" species:9606 "Homo
sapiens" [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0050873 "brown fat
cell differentiation" evidence=IEA] GO:GO:0050873 GO:GO:0005605
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0001568 EMBL:Z99289 EMBL:AL590106
HGNC:HGNC:6484 ChiTaRS:LAMA4 IPI:IPI00983822
ProteinModelPortal:E5RFQ2 SMR:E5RFQ2 Ensembl:ENST00000521398
ArrayExpress:E5RFQ2 Bgee:E5RFQ2 Uniprot:E5RFQ2
Length = 331
Score = 148 (57.2 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 50/180 (27%), Positives = 72/180 (40%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE--QCKCKQ 58
+G + + CLD + G D+ +G P C L + ++C +C C +
Sbjct: 106 TGEHCEKCLDGYIG---DS---IRGAPQFCQPCPCPLPHLANFAESCYRKNGAVRCICNE 159
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGS---VREDCEQMTGRCV-CKP 114
G C+RC PGY+G + C KC CS + EDC+++TG+C C
Sbjct: 160 NYAGPNCERCAPGYYGNPLLIGST-----CKKCDCSGNSDPNLIFEDCDEVTGQCRNCLR 214
Query: 115 GVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCG-SGANREDCPS 173
G KC C P G V C G P + TG L+ G DCP+
Sbjct: 215 NTTGFKCERCA-PGY-YGDARIAKNCAVCNCGGGP--CDSVTGECLEEGFEPPTGMDCPT 270
Score = 120 (47.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 49/170 (28%), Positives = 69/170 (40%)
Query: 35 CGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C CN G++ + C++ + C C++ G C++C GY G S I AP C C C
Sbjct: 82 CDCN--GNSNE-CLDGSGYCVHCQRNTTGEHCEKCLDGYIGDS-IRG-APQF--CQPCPC 134
Query: 94 S--QFGSVREDCEQMTG--RCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPC---- 145
+ E C + G RC+C G C C P G N + G K C
Sbjct: 135 PLPHLANFAESCYRKNGAVRCICNENYAGPNCERCA-PGY-YG-NPLLIGSTCKKCDCSG 191
Query: 146 NGEPPVI----NLQTGVELDC---GSGANREDCPSDAY--CHITQNFARC 186
N +P +I + TG +C +G E C Y I +N A C
Sbjct: 192 NSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPGYYGDARIAKNCAVC 241
>RGD|1307089 [details] [associations]
symbol:Ntng2 "netrin G2" species:10116 "Rattus norvegicus"
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0007409
"axonogenesis" evidence=IEA;ISO] [GO:0046658 "anchored to plasma
membrane" evidence=IEA;ISO] InterPro:IPR000742 Pfam:PF00008
PROSITE:PS50026 SMART:SM00181 RGD:1307089 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 EMBL:CH474001
GeneTree:ENSGT00700000104042 CTD:84628 KO:K16359 IPI:IPI00561682
RefSeq:NP_001101295.1 UniGene:Rn.218540 Ensembl:ENSRNOT00000045919
GeneID:311836 KEGG:rno:311836 UCSC:RGD:1307089 NextBio:664255
Uniprot:D4A9F4
Length = 564
Score = 152 (58.6 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 30/85 (35%), Positives = 43/85 (50%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
CK G C C GY+ S+ D + C++C C+Q GSV + C + TG C C+ G
Sbjct: 411 CKHNTRGQHCQHCRLGYYRNG--SAELDDENVCIECNCNQIGSVHDRCNE-TGFCECREG 467
Query: 116 VKGSKCNECLDPNKKLGPNGCMPGM 140
G KC++CL + GC P +
Sbjct: 468 AVGPKCDDCLPTH--YWRQGCYPNV 490
Score = 151 (58.2 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 42/115 (36%), Positives = 54/115 (46%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPG-YWGLSKISSYAPDIDGCLKCGC 93
C CN++GS D C E T C+C++G G KCD C P YW + D D L C
Sbjct: 444 CNCNQIGSVHDRCNE-TGFCECREGAVGPKCDDCLPTHYWRQGCYPNVCDD-DQLL---C 498
Query: 94 SQFGSVREDCEQMTGRCVCKPGVKGSKCNE--CLDPNKKLGPNGC--MPGMEVKP 144
G+ C+Q RC C PG G +C + C D GP+ C PG +P
Sbjct: 499 QNGGT----CQQ-NQRCACPPGYAGIRCEQPRC-DLADDAGPD-CDRAPGTVPRP 546
>UNIPROTKB|A7MB18 [details] [associations]
symbol:NTN4 "NTN4 protein" species:9913 "Bos taurus"
[GO:0060668 "regulation of branching involved in salivary gland
morphogenesis by extracellular matrix-epithelial cell signaling"
evidence=IEA] [GO:0043237 "laminin-1 binding" evidence=IEA]
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0016322 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 CTD:59277
eggNOG:NOG329215 HOVERGEN:HBG082019 KO:K06845 OMA:RSQDFGK
GO:GO:0060668 HOGENOM:HOG000060085 OrthoDB:EOG4M0F17
EMBL:DAAA02013606 EMBL:DAAA02013607 EMBL:BC151286 IPI:IPI00697984
RefSeq:NP_001095673.1 UniGene:Bt.26919 Ensembl:ENSBTAT00000004136
GeneID:537455 KEGG:bta:537455 InParanoid:A7MB18 NextBio:20877139
Uniprot:A7MB18
Length = 627
Score = 152 (58.6 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 43/128 (33%), Positives = 49/128 (38%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQ-----------CK-CKQGVGGLKCDRCEPG-YWGLS 76
G P+ C K DAC D C C+ G C RC+PG YW L
Sbjct: 324 GSPNECRTCKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYWDLR 383
Query: 77 KISSYAPDIDGCLKCGCSQFGSVRED------CEQMTGRCVCKPGVKGSKCNECLDPNKK 130
+ S APD C C C GS C+ G C CKPGV G C C+
Sbjct: 384 RPFS-APD--ACKSCSCHPVGSAVLPFSSVTFCDPSNGDCPCKPGVAGPHCERCMVGYWG 440
Query: 131 LGPNGCMP 138
G GC P
Sbjct: 441 FGDYGCRP 448
Score = 118 (46.6 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 37/116 (31%), Positives = 48/116 (41%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGS------TEDACIEDTEQCK 55
G + + C +Y D + PD C S C C+ +GS + C C
Sbjct: 368 GQHCQRCKPGFYW---DLRRPFSAPD--ACKS-CSCHPVGSAVLPFSSVTFCDPSNGDCP 421
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV 111
CK GV G C+RC GYWG Y GC C C+ GS C+ TG C+
Sbjct: 422 CKPGVAGPHCERCMVGYWGFG---DY-----GCRPCDCA--GS----CDPHTGDCL 463
Score = 37 (18.1 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 107 TGRCVCKPGVKGSKCNEC 124
+G+C CK V G+ C
Sbjct: 502 SGKCECKEQVLGNSKAFC 519
>ZFIN|ZDB-GENE-050310-1 [details] [associations]
symbol:ntn4 "netrin 4" species:7955 "Danio rerio"
[GO:0048514 "blood vessel morphogenesis" evidence=IMP] [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 ZFIN:ZDB-GENE-050310-1 GO:GO:0005576
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG082019 EMBL:BC163582 IPI:IPI00864479
UniGene:Dr.84045 ProteinModelPortal:B3DJR9 HOGENOM:HOG000168430
Uniprot:B3DJR9
Length = 593
Score = 151 (58.2 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 31/85 (36%), Positives = 39/85 (45%)
Query: 54 CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCK 113
C C G C C+ G++ + S APD C C C+ GS C+ G CVCK
Sbjct: 344 CDCLHNTTGQHCQHCQSGFYRDPEKPSTAPD--SCTPCMCNHVGS--SYCKPDNGECVCK 399
Query: 114 PGVKGSKCNECLDPNKKLGPNGCMP 138
PGV G C +C+ L GC P
Sbjct: 400 PGVAGRHCEQCMLGYWGLDEYGCKP 424
Score = 145 (56.1 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 39/113 (34%), Positives = 57/113 (50%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
+G + + C +Y P+ + A PD+ C + C CN +GS+ C D +C CK GV
Sbjct: 351 TGQHCQHCQSGFYRD-PEKPSTA--PDS--C-TPCMCNHVGSSY--CKPDNGECVCKPGV 402
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCK 113
G C++C GYWGL + Y GC C C+ G DC+ TG C+ +
Sbjct: 403 AGRHCEQCMLGYWGLDE---Y-----GCKPCQCA--G----DCDPYTGDCMIR 441
>UNIPROTKB|E1BGE0 [details] [associations]
symbol:E1BGE0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR011489
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
GeneTree:ENSGT00690000101691 OMA:QGAACDP EMBL:DAAA02043188
EMBL:DAAA02043189 EMBL:DAAA02043190 IPI:IPI00703880
Ensembl:ENSBTAT00000027771 Uniprot:E1BGE0
Length = 1572
Score = 154 (59.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 61/195 (31%), Positives = 74/195 (37%)
Query: 16 CPDNKTLAQGPD-NAGCP-----STCG--CNKLGSTEDACIEDTEQCKCKQGVGGLKCD- 66
CP T GP CP CG C+ G + AC + C C G G C
Sbjct: 1193 CPPGFT---GPSCEQACPPGTFGERCGQQCHCPGENQ-ACHPASGTCACAPGYHGAGCQQ 1248
Query: 67 RCEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN-EC 124
RC PG +G P GC L CGC GS C+ +TG C C G G+ C+ C
Sbjct: 1249 RCPPGRFG--------P---GCELLCGCLNGGS----CDAVTGACRCPAGFLGTDCSLAC 1293
Query: 125 LDPNKKLGPN-----GCMPGMEVKPCNGEPPVINLQTGVELDCGS-----GANRE---DC 171
P+ + GP GC G P G +TGV + G G N E C
Sbjct: 1294 --PHGRFGPGCAYVCGCGQGAACDPVTGSCSCPPGRTGVHCEHGCPQNRFGVNCEHACSC 1351
Query: 172 PSDAYCHITQNFARC 186
+ CH T C
Sbjct: 1352 RNGGLCHATNGSCSC 1366
Score = 142 (55.0 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 37/109 (33%), Positives = 49/109 (44%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGC 88
GC + C C + + C T +C C G GL C R C+ G+WG PD
Sbjct: 826 GCQTQCSC----ANDGLCHPVTGRCSCAPGWTGLSCQRACDSGHWG--------PDCS-- 871
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE-CLDPNKKLGPNGC 136
C CS G C+ ++G CVC+ G G +C + C P GP GC
Sbjct: 872 FTCNCSA-G--HGGCDAVSGLCVCEAGYVGPRCEQRC--PQGYFGP-GC 914
Score = 133 (51.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 41/128 (32%), Positives = 55/128 (42%)
Query: 16 CPDNKTLAQGPD-NAGCPST---CGCNKLGSTED---ACIEDTEQCKCKQGVGGLKC-DR 67
CP +T G D A CP GC ++ + AC+ +T C C+ G G +C D
Sbjct: 761 CPPGRT---GDDCGADCPEGRWGLGCQEICPPCEHGAACVPETGACLCRPGFMGSRCQDA 817
Query: 68 CEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
C G++G P GC +C C+ G C +TGRC C PG G C D
Sbjct: 818 CPAGWFG--------P---GCQTQCSCANDGL----CHPVTGRCSCAPGWTGLSCQRACD 862
Query: 127 PNKKLGPN 134
GP+
Sbjct: 863 SGH-WGPD 869
Score = 128 (50.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 57/185 (30%), Positives = 67/185 (36%)
Query: 15 CCPDNKTLAQGPD--NAGCPSTC-------GCNKL-GSTED-ACIEDTEQCKCKQGVGGL 63
C P + T A P AGC C GC L G +C T C+C G G
Sbjct: 1228 CHPASGTCACAPGYHGAGCQQRCPPGRFGPGCELLCGCLNGGSCDAVTGACRCPAGFLGT 1287
Query: 64 KCD-RCEPGYWGLSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
C C G +G P GC CGC Q G+ C+ +TG C C PG G C
Sbjct: 1288 DCSLACPHGRFG--------P---GCAYVCGCGQ-GAA---CDPVTGSCSCPPGRTGVHC 1332
Query: 122 NE-CLDPNKKLGPN-----GCMPGMEVKPCNGEPPVINLQTG--VELDCGSGANREDCPS 173
C P + G N C G NG TG EL C +G C
Sbjct: 1333 EHGC--PQNRFGVNCEHACSCRNGGLCHATNGSCSCGLGWTGPHCELACPAGRYGAACSL 1390
Query: 174 DAYCH 178
+ CH
Sbjct: 1391 ECSCH 1395
Score = 123 (48.4 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 41/112 (36%), Positives = 49/112 (43%)
Query: 31 CPS-TCGCNKLGSTE--DA-CIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDI 85
CP+ T G N GS DA C T QC C G G C C G WGL
Sbjct: 732 CPAGTFGQNCSGSCSCGDAPCDRVTGQCLCPPGRTGDDCGADCPEGRWGL---------- 781
Query: 86 DGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGC 136
GC + C + G+ C TG C+C+PG GS+C + P GP GC
Sbjct: 782 -GCQEICPPCEHGAA---CVPETGACLCRPGFMGSRCQDAC-PAGWFGP-GC 827
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 46/165 (27%), Positives = 69/165 (41%)
Query: 13 YGCC-PDNKTLAQGPDNAG--CPSTC-------GCNKLGSTEDA--CIEDTEQCKCKQGV 60
+G C P + GP G C +C GC + + C + QC C G+
Sbjct: 1397 HGACEPTSGACRCGPGFYGQACEHSCPPGFHGAGCQQTCQCQHGAPCDPVSGQCLCPAGL 1456
Query: 61 GGLKCDR-CEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
G C+R CEPG +G +GC +C C + G C+ +TG C+C PG G
Sbjct: 1457 HGQFCERGCEPGSFG-----------EGCGQQCDC-ELGV---PCDPVTGHCLCPPGRTG 1501
Query: 119 SKCNECLDPNKKL-GPN-----GCMPGMEVKPCNGEPPVINLQTG 157
+ C+ L + GP C G + P +G+ ++ TG
Sbjct: 1502 TTCD--LGCRRGFFGPGCALHCSCGGGADCDPVSGQCLCVDGYTG 1544
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 52/196 (26%), Positives = 73/196 (37%)
Query: 5 LKSCLDSWYGCCPDNKTLAQGPDNAGCPST-CGCNK--LG-STEDACIEDTEQCKCKQGV 60
L++C + YG + L Q + S C C + G + E C+ + C
Sbjct: 1031 LQACPEGLYGEDCQHSCLCQNGGSCDPVSGHCTCPEGWAGLACEKECLPGVFEVGCPHSC 1090
Query: 61 GGLK---CD----RCE-PGYWGLSKISSYAPD-IDGCL---KCGCSQFGSVREDCEQMTG 108
G L CD C P W K S P+ G L +C C ++G+ C +TG
Sbjct: 1091 GCLNGGLCDPHTVHCLCPAGWTGDKCQSSCPEGTFGVLCEERCAC-RWGAA---CHAVTG 1146
Query: 109 RCVCKPGVKGSKCNECLDPN---KKLGPN-GCMPGMEVKPCNGE---PPVINLQTGVELD 161
C+C PG +GS+C P+ + C PG GE PP E
Sbjct: 1147 ACLCPPGWRGSRCESACPPSWFGEACAQRCQCPPGAACHHVTGECHCPPGFT-GPSCEQA 1205
Query: 162 CGSGANREDCPSDAYC 177
C G E C +C
Sbjct: 1206 CPPGTFGERCGQQCHC 1221
Score = 114 (45.2 bits), Expect = 0.00089, P = 0.00089
Identities = 30/94 (31%), Positives = 42/94 (44%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGCL 89
C TC + G T C+ + C C G GL C+ C P +G K S++
Sbjct: 521 CSLTCDDCRNGGT---CLPTLDSCDCPDGWTGLVCNETCPPDTFG--KNCSFS------- 568
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
C C G+ C+ +TG C C PGV G+ C +
Sbjct: 569 -CSCQNGGT----CDPVTGACRCPPGVGGAHCED 597
Score = 114 (45.2 bits), Expect = 0.00089, P = 0.00089
Identities = 51/171 (29%), Positives = 66/171 (38%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQG-----VGGLKCDRCEPGYWGLSKISSYAPDI 85
C S C + G +AC ++C+C G V G +C C PG+ G S + P
Sbjct: 1159 CESACPPSWFG---EAC---AQRCQCPPGAACHHVTG-EC-HCPPGFTGPSCEQACPPGT 1210
Query: 86 DGCLKCG--CSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN-----GCMP 138
G +CG C G + C +G C C PG G+ C + P + GP GC+
Sbjct: 1211 FG-ERCGQQCHCPGE-NQACHPASGTCACAPGYHGAGCQQRCPPGR-FGPGCELLCGCLN 1267
Query: 139 GMEVKPCNG--EPPVINLQTGVELDCGSGANREDCPSDAY-CHITQNFARC 186
G G P L T L C G C AY C Q A C
Sbjct: 1268 GGSCDAVTGACRCPAGFLGTDCSLACPHGRFGPGC---AYVCGCGQG-AAC 1314
>UNIPROTKB|E1BYK5 [details] [associations]
symbol:ATRNL1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0030246 "carbohydrate binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001304 InterPro:IPR002165
InterPro:IPR015915 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0007186 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 OMA:YTQQKVS InterPro:IPR013111 InterPro:IPR003659
Pfam:PF07974 SMART:SM00423 GeneTree:ENSGT00390000001118
EMBL:AADN02030934 IPI:IPI00585255 ProteinModelPortal:E1BYK5
Ensembl:ENSGALT00000014903 Uniprot:E1BYK5
Length = 1242
Score = 144 (55.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 36/104 (34%), Positives = 48/104 (46%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG-CL 89
CP+ C CN G + CI +CK G +C+ C PGY+G P G C
Sbjct: 1014 CPA-CQCN--GHS--TCINSNVCDQCKNLTTGKQCETCMPGYYG-------DPTNGGQCT 1061
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKP-GVKGSKCNECLDPNKKLG 132
C CS ++ C TG+C C G+KG +C C N+ LG
Sbjct: 1062 ACTCSGHANI---CHMQTGKCFCTTKGIKGDQCQLCDSENRYLG 1102
Score = 35 (17.4 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 1 SGIYLKSCLDSWYGCCPD 18
+G L C DSW G PD
Sbjct: 267 TGEKLCVCNDSWQG--PD 282
>MGI|MGI:109321 [details] [associations]
symbol:Lama4 "laminin, alpha 4" species:10090 "Mus musculus"
[GO:0001568 "blood vessel development" evidence=IMP] [GO:0005102
"receptor binding" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0005604 "basement membrane" evidence=ISO;IDA]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0005606 "laminin-1
complex" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0050873
"brown fat cell differentiation" evidence=IDA] [GO:0070062
"extracellular vesicular exosome" evidence=ISO] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 MGI:MGI:109321
GO:GO:0030155 GO:GO:0050873 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0001568
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
eggNOG:NOG247347 GO:GO:0005606 CTD:3910 HOVERGEN:HBG052299
KO:K06241 OMA:QLDDYNA OrthoDB:EOG4QFWCB ChiTaRS:LAMA4 EMBL:U58950
EMBL:Y09827 EMBL:U59865 EMBL:BC115942 EMBL:U88352 EMBL:U69176
IPI:IPI00223446 RefSeq:NP_034811.2 UniGene:Mm.258065
ProteinModelPortal:P97927 SMR:P97927 STRING:P97927
PhosphoSite:P97927 PaxDb:P97927 PRIDE:P97927
Ensembl:ENSMUST00000019992 GeneID:16775 KEGG:mmu:16775
UCSC:uc007evq.2 HOGENOM:HOG000113278 InParanoid:Q14BF2
NextBio:290616 Bgee:P97927 CleanEx:MM_LAMA4 Genevestigator:P97927
GermOnline:ENSMUSG00000019846 Uniprot:P97927
Length = 1816
Score = 145 (56.1 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 38/130 (29%), Positives = 57/130 (43%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE--QCKCKQ 58
+G + + CLD + G D+ +G P C L + ++C +C CK+
Sbjct: 106 TGEHCEKCLDGYIG---DS---IRGTPRFCQPCPCPLPHLANFAESCYRKNGAVRCICKE 159
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGS---VREDCEQMTGRCV-CKP 114
G C+RC PGY+G + C KC CS + EDC+++TG+C C
Sbjct: 160 NYVGPNCERCAPGYYGNPLLIGST-----CKKCDCSGNSDPNLIFEDCDEITGQCRNCLR 214
Query: 115 GVKGSKCNEC 124
G KC C
Sbjct: 215 NTTGFKCERC 224
Score = 37 (18.1 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 4/14 (28%), Positives = 10/14 (71%)
Query: 169 EDCPSDAYCHITQN 182
+ P D++CH++ +
Sbjct: 1442 QKAPRDSHCHLSSS 1455
>ZFIN|ZDB-GENE-030131-8092 [details] [associations]
symbol:atrnl1b "attractin-like 1b" species:7955
"Danio rerio" [GO:0030246 "carbohydrate binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000742 InterPro:IPR001304
InterPro:IPR002165 InterPro:IPR015915 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181
ZFIN:ZDB-GENE-030131-8092 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 Gene3D:2.130.10.80 InterPro:IPR015916
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 EMBL:CU464184 EMBL:BX004794
IPI:IPI00834013 RefSeq:XP_697655.4 UniGene:Dr.81107
ProteinModelPortal:E7F6C7 Ensembl:ENSDART00000042514 GeneID:569196
KEGG:dre:569196 CTD:569196 NextBio:20889561 Bgee:E7F6C7
Uniprot:E7F6C7
Length = 1364
Score = 141 (54.7 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 35/105 (33%), Positives = 52/105 (49%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCK-CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG-C 88
CP+ C CN G + C+ + C+ C+ GL C+ C PGY+G P G C
Sbjct: 995 CPA-CQCN--GHS--TCV-NVSMCEQCRNLTTGLHCETCLPGYYG-------DPTNGGKC 1041
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKP-GVKGSKCNECLDPNKKLG 132
C C+ ++ C ++TG+C C G+KG +C C N+ LG
Sbjct: 1042 QACKCNGHANM---CHELTGKCFCTTKGIKGDQCQLCDSENRYLG 1083
Score = 38 (18.4 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 10/18 (55%), Positives = 10/18 (55%)
Query: 1 SGIYLKSCLDSWYGCCPD 18
SG L C DSW G PD
Sbjct: 245 SGEKLCVCNDSWQG--PD 260
>UNIPROTKB|F1N0T1 [details] [associations]
symbol:Bt.54919 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IEA] GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0014002 GO:GO:0000904
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 OMA:QRGRRCE EMBL:DAAA02032247
EMBL:DAAA02032248 EMBL:DAAA02032249 EMBL:DAAA02032250
EMBL:DAAA02032251 EMBL:DAAA02032252 EMBL:DAAA02032253
EMBL:DAAA02032254 IPI:IPI00698418 Ensembl:ENSBTAT00000023245
Uniprot:F1N0T1
Length = 1585
Score = 153 (58.9 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 44/137 (32%), Positives = 61/137 (44%)
Query: 15 CCP--DNKTLAQGPDNAGCPSTC-GCNKLGSTEDACIEDTE---------QC-KCKQGVG 61
C P ++ A+G A + C CN G +E+ C D E +C C+
Sbjct: 317 CLPFFQDRPWARGTAEAA--NECLPCNCSGHSEE-CTFDRELFRSSGHGGRCLHCRAHTA 373
Query: 62 GLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
G C+RC+ ++ + S P C C C GS+R C+ + G CVCKP V G KC
Sbjct: 374 GPHCERCQENFY---RWSPQTP----CQPCDCHPAGSLRLQCDDL-GTCVCKPTVMGWKC 425
Query: 122 NECLDPNKKLGPNGCMP 138
+ CL L GC P
Sbjct: 426 DRCLSGFHSLSEGGCRP 442
Score = 138 (53.6 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 35/113 (30%), Positives = 48/113 (42%)
Query: 52 EQCKCKQGVGGLKCDRCEPGYWGLSKISS-YAPDIDGCLKCGCSQFGSVREDCEQMTGRC 110
E C C QG G C+ C PGY + + YA C+ C C+Q G+ C+ TG C
Sbjct: 685 ETCSCPQGYTGQFCESCAPGYKRNTPLGGPYA----SCVPCTCNQHGT----CDPNTGVC 736
Query: 111 VCKPGVKGSKCNECLDPNKKLGP-NGCMPGMEVKPCNGEPPVINLQTGVELDC 162
+C +G C CL P P G + PC G+ + E+ C
Sbjct: 737 LCGHHTEGPSCERCL-PGFYGNPFTGQADDCQPCPCPGQSACTTIPESGEVVC 788
>ZFIN|ZDB-GENE-080506-1 [details] [associations]
symbol:megf10 "multiple EGF-like-domains 10"
species:7955 "Danio rerio" [GO:0030239 "myofibril assembly"
evidence=IMP] InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00181 ZFIN:ZDB-GENE-080506-1
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030239 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS50027
Pfam:PF12661 GeneTree:ENSGT00690000101691 EMBL:CR396586
IPI:IPI00512925 Ensembl:ENSDART00000043936 Uniprot:E9QJQ6
Length = 1119
Score = 151 (58.2 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 42/128 (32%), Positives = 53/128 (41%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
CL W G D+ A+G C +C C S C D C+C G G C
Sbjct: 555 CLAGWTGIHCDS-VCAEGRWGPNCSLSCNCKNSAS----CSPDEGACECAPGFRGTTCQH 609
Query: 68 -CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
C PG +G + S P C+ G C +TG+C C PG KG+ CNE
Sbjct: 610 ICSPGVFG-HRCSQACPH---CVHSN----GP----CHHVTGQCECLPGFKGALCNEVC- 656
Query: 127 PNKKLGPN 134
P+ K G N
Sbjct: 657 PSGKFGKN 664
Score = 146 (56.5 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 49/179 (27%), Positives = 70/179 (39%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
C + G + + G C C CN +T +C + +C C+ G GL C+
Sbjct: 337 CEQGYTGESCEERICPDGQYGLKCDRKCPCNT-NNTR-SCHPMSGECSCQSGWSGLYCNE 394
Query: 68 -CEPGYWGLSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECL 125
C PG++G + C + C C Q G+ DC ++G C+C PG KGS C
Sbjct: 395 TCAPGFYG-----------EACQEVCRC-QNGA---DCHSVSGECICAPGYKGSDCAIAC 439
Query: 126 DPNKKLGPN-----GCMPGMEVKPCNGEPPVINLQTGVE--LDCGSGANREDCPSDAYC 177
P G N C G P +G GV+ ++C SG C C
Sbjct: 440 PPGT-YGINCTSLCSCKNGAICSPIDGSCSCQAGWHGVDCSINCPSGTWGLGCNLSCVC 497
Score = 139 (54.0 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 54/186 (29%), Positives = 69/186 (37%)
Query: 15 CCPDNKTLAQGPDNA-GCP-STCG--CNKLGSTEDA--CIEDTEQCKCKQGVGGLKCD-R 67
C P K G D A CP T G C L S ++ C C C+ G G+ C
Sbjct: 426 CAPGYK----GSDCAIACPPGTYGINCTSLCSCKNGAICSPIDGSCSCQAGWHGVDCSIN 481
Query: 68 CEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE-CL 125
C G WGL GC L C C G+ C + G+C C PG +G +C++ C
Sbjct: 482 CPSGTWGL-----------GCNLSCVCGNGGA----CNALDGKCTCTPGWRGDRCDQHCQ 526
Query: 126 DPNKKLGPN---GCMPGMEVKPCNGEPPVINLQTGVELD--CGSGANREDCPSDAYCHIT 180
D L C P G + TG+ D C G +C C
Sbjct: 527 DGTYGLDCRERCDCSHADGCHPSTGHCRCLAGWTGIHCDSVCAEGRWGPNCSLSCNC--- 583
Query: 181 QNFARC 186
+N A C
Sbjct: 584 KNSASC 589
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 43/148 (29%), Positives = 61/148 (41%)
Query: 47 CIEDTEQCKCKQGVGGLKC-DRCEPGYWGLSKISSYAPDIDGCLK-CGCSQFGSVREDCE 104
C T QC C G G +C D+C+ G +G+ GC + C C G+ C
Sbjct: 285 CSPSTGQCVCSSGYTGERCQDQCQVGTYGI-----------GCSQACRCVN-GA---QCY 329
Query: 105 QMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVK-PCN-GEPPVINLQTGVELDC 162
++G C+C+ G G C E + P+ + G C + K PCN + +G E C
Sbjct: 330 HVSGACLCEQGYTGESCEERICPDGQYGLK-C----DRKCPCNTNNTRSCHPMSG-ECSC 383
Query: 163 GSGAN----REDCPSDAYCHITQNFARC 186
SG + E C Y Q RC
Sbjct: 384 QSGWSGLYCNETCAPGFYGEACQEVCRC 411
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 47/191 (24%), Positives = 71/191 (37%)
Query: 1 SG-IYLKSCLDSW-YGCC--PDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKC 56
SG I + C + +G C P+ G A C S C + G + + + C
Sbjct: 98 SGDICVPHCAEKCVHGRCVAPNTCQCEPGWGGADCSSACDRDHWGPHCSSRCQCKNEALC 157
Query: 57 KQGVGGLKCDRCEPGY--WGLSKISSYAPDIDGCL-KCGCSQFGSVREDCEQMTGRCVCK 113
G C C PGY W + ++ + C KC C + C +TG CVC
Sbjct: 158 NPITGA--CI-CAPGYHGWRCEDLCDHSTYGNNCQQKCLCQNNAT----CHHITGECVCS 210
Query: 114 PGVKGSKCNECLDPNK--KLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCG----SGAN 167
PG G+ C + P K + C P C+ + G + CG +G
Sbjct: 211 PGYTGAFCEDLCPPGKHGQQCEERC-PCQNGGVCHHVTGECSCPAGWGMVCGQPCPTGRF 269
Query: 168 REDCPSDAYCH 178
++C + CH
Sbjct: 270 GKNCSQECQCH 280
>ZFIN|ZDB-GENE-060503-252 [details] [associations]
symbol:megf11 "multiple EGF-like-domains 11"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR007527
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS50966 PROSITE:PS51041
SMART:SM00181 ZFIN:ZDB-GENE-060503-252 GO:GO:0008270
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS50027
InterPro:IPR006212 InterPro:IPR009030 SMART:SM00261 SUPFAM:SSF57184
Pfam:PF12661 GeneTree:ENSGT00690000101691 EMBL:BX890618
EMBL:BX908395 EMBL:CR788229 IPI:IPI00785724
Ensembl:ENSDART00000090855 Uniprot:F1Q4V3
Length = 1114
Score = 150 (57.9 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 55/187 (29%), Positives = 69/187 (36%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
CL W G D+ QG + C TC C GS C + C C G G C R
Sbjct: 559 CLPGWTGIHCDS-ICPQGFWGSNCSMTCSCQNGGS----CSPEDGTCVCAPGYRGTSCKR 613
Query: 68 -CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
C PG++G + S P C+ G C +TG C C G GS CN+
Sbjct: 614 ICPPGFYG-HRCSQLCPQ---CVH----STGP----CHHVTGHCECLAGFFGSLCNQVC- 660
Query: 127 PNKKLGPNG-----CMPGMEVKPCNGEPPVINLQTGVELD--CGSGANREDCPSDAYCHI 179
P+ K G C P +G TG + C G DC + CH
Sbjct: 661 PSGKFGKACAEICLCTNNGTCNPIDGSCQCFPGWTGDDCSQICPIGQWGPDCLNSCNCH- 719
Query: 180 TQNFARC 186
N A+C
Sbjct: 720 --NGAQC 724
Score = 147 (56.8 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 48/165 (29%), Positives = 64/165 (38%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGC- 88
C C CN + +C T +C C G GL C+ C PGY+G +GC
Sbjct: 364 CDKYCPCNSTNTI--SCHPLTGECSCTAGWTGLYCNETCPPGYYG-----------EGCG 410
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN-----GCMPGMEVK 143
+ C C+ G+ DC +TG C+C PG G C++ P+ G N C
Sbjct: 411 VPCQCAN-GA---DCHSLTGACICAPGYTGDDCSQTC-PSGLFGTNCTSICHCHNQASCS 465
Query: 144 PCNGEPPVINLQTGVELD--CGSGANREDCPSDAYCHITQNFARC 186
P +G GV+ C SG C C N A C
Sbjct: 466 PIDGSCICKEGWQGVDCSILCSSGTWGLGCNQTCLC---ANGAAC 507
Score = 137 (53.3 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 47/148 (31%), Positives = 66/148 (44%)
Query: 47 CIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQ 105
C+ + C+C+ G GGL C CE GYWG P +C C G++ C
Sbjct: 118 CVSP-DTCQCEPGWGGLDCSSGCESGYWG--------PHCSN--RCQCKN-GAL---CNP 162
Query: 106 MTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSG 165
+TG CVC G +G +C + +P G GC ++ + NG + +TG E C G
Sbjct: 163 ITGACVCTDGYQGWRCEDLCEPGY-YG-KGCQ--LQCQCLNGA--TCHHETG-ECICAPG 215
Query: 166 ANR----EDCPSDAYCHITQNFARC-CR 188
E CPS + H Q RC C+
Sbjct: 216 YMGPICGERCPSGS--HGPQCEQRCPCQ 241
Score = 118 (46.6 bits), Expect = 0.00019, P = 0.00019
Identities = 28/84 (33%), Positives = 35/84 (41%)
Query: 45 DACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDC 103
D C + C+C G G+ CD C G+WG S S + C C GS C
Sbjct: 548 DGCDHVSGLCRCLPGWTGIHCDSICPQGFWG-SNCS---------MTCSCQNGGS----C 593
Query: 104 EQMTGRCVCKPGVKGSKCNECLDP 127
G CVC PG +G+ C P
Sbjct: 594 SPEDGTCVCAPGYRGTSCKRICPP 617
Score = 116 (45.9 bits), Expect = 0.00033, P = 0.00033
Identities = 29/89 (32%), Positives = 42/89 (47%)
Query: 47 CIEDTEQCKCKQGVGGLKCD-RCEPGYWGLSKISSYAPDIDGCLK-CGCSQFGSVREDCE 104
C T QC C+ G G C+ +C PG +G Y GC + C C + C+
Sbjct: 767 CDHITGQCACRTGFIGTNCEQKCPPGTFG------Y-----GCQQLCECMNNAT----CD 811
Query: 105 QMTGRCVCKPGVKGSKCNECLDPNKKLGP 133
+TG C C PG KG +C++ ++L P
Sbjct: 812 YVTGTCYCSPGYKGIRCDQAALVMEELNP 840
>UNIPROTKB|A8XMW6 [details] [associations]
symbol:ced-1 "Cell death abnormality protein 1"
species:6238 "Caenorhabditis briggsae" [GO:0001845 "phagolysosome
assembly" evidence=ISS] [GO:0009986 "cell surface" evidence=ISS]
[GO:0012501 "programmed cell death" evidence=ISS] [GO:0031532
"actin cytoskeleton reorganization" evidence=ISS] [GO:0034620
"cellular response to unfolded protein" evidence=ISS] [GO:0042742
"defense response to bacterium" evidence=ISS] [GO:0043652
"engulfment of apoptotic cell" evidence=ISS] [GO:0045184
"establishment of protein localization" evidence=ISS]
InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00181 GO:GO:0016021 GO:GO:0005886
GO:GO:0006915 GO:GO:0009986 GO:GO:0030670 GO:GO:0042742
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0045184 GO:GO:0031532
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 GO:GO:0043652 GO:GO:0012501 GO:GO:0034620
InterPro:IPR006212 InterPro:IPR009030 SMART:SM00261 SUPFAM:SSF57184
EMBL:HE600911 ProteinModelPortal:A8XMW6 STRING:A8XMW6
EnsemblMetazoa:CBG15845 WormBase:CBG15845 HOGENOM:HOG000294130
GO:GO:0001845 Pfam:PF12661 Uniprot:A8XMW6
Length = 1134
Score = 150 (57.9 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 37/105 (35%), Positives = 47/105 (44%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGC 88
GC C C S C T +C C G G +CD+ CE GY+G PD C
Sbjct: 772 GCRQVCRCT---SEFKQCNAQTGECSCPAGFQGDRCDKPCEDGYYG--------PD---C 817
Query: 89 LK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLG 132
+K C C G+ C ++TG C+C PG G C+ L P G
Sbjct: 818 IKKCKCQ--GTATASCNRVTGVCICHPGFTGEFCH-ALCPESTFG 859
Score = 142 (55.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 55/179 (30%), Positives = 73/179 (40%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
C D W G NK +G A C C C G+T C +C CK G G C++
Sbjct: 223 CTDGWGGEYCLNKC-EEGKFGADCKFECTCQN-GAT---CDNTNGKCLCKSGFHGALCEK 277
Query: 68 -CEPGYWGLSKISSYAPDIDGCL-KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN-EC 124
C G++G GC KC C +DC+ TG C C G G +C+ C
Sbjct: 278 PCSEGFFGA-----------GCTQKCQCLN----NQDCDSETGECKCI-GWTGKQCDIGC 321
Query: 125 LDPNKKLG-PNGCM-PGMEVKPCNGEPPVINLQTGVELDCGSG---ANRED--CPSDAY 176
L C PG+E + N + +TG E C SG AN ++ C +D Y
Sbjct: 322 ARGRFGLQCKQKCTCPGLEFQDSNAS---CDAKTG-ECQCESGYKGANCDERKCSADTY 376
Score = 135 (52.6 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 49/150 (32%), Positives = 61/150 (40%)
Query: 47 CIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGCLK-CGCSQFGSVREDCE 104
C+E + C+C G GG C C G WGL GC K C C G+ +C+
Sbjct: 130 CVEPGK-CECDPGFGGKICSSSCSIGTWGL-----------GCSKKCDCEN-GA---NCD 173
Query: 105 QMTGRCVCKPGVKGSKCNE-CLDPNKKLGPNGCM---PGMEVKPCNGEPPVINLQT-GVE 159
G C+C G +G +C E C P K GPN C+ P CN E + G E
Sbjct: 174 PELGDCICPSGFQGKRCEEEC--PIDKWGPN-CVKSCPCQNGGKCNHEGKCVCTDGWGGE 230
Query: 160 L---DCGSGANREDCPSDAYCHITQNFARC 186
C G DC + C QN A C
Sbjct: 231 YCLNKCEEGKFGADCKFECTC---QNGATC 257
Score = 124 (48.7 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 53/195 (27%), Positives = 72/195 (36%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
C + G D + + A C C C + S C +T C+CK G G D
Sbjct: 357 CESGYKGANCDERKCSADTYGADCSKQCSC--VMSNTVMCAPNTGFCRCKPGFYG---DN 411
Query: 68 CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE-CLD 126
CE SK SY P+ + C + + + G+CVCK G G+ C++ C
Sbjct: 412 CE---LACSK-DSYGPNCEKQAMCDWTH----ASEADPANGKCVCKSGRSGANCSQPC-- 461
Query: 127 PNKKLGPNGCMPGMEVKP----CNGEPPVINLQTGV-----ELDCGS---GANRE---DC 171
P GPN C E C+G N G E C + GAN E C
Sbjct: 462 PIDFYGPN-CALQCECNGRGIGCHGFDGKCNCAPGYTGHRCEHHCPALTFGANCEKRCQC 520
Query: 172 PSDAYCHITQNFARC 186
P+ C+ C
Sbjct: 521 PAGVGCNPITGECEC 535
Score = 123 (48.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 49/165 (29%), Positives = 62/165 (37%)
Query: 23 AQGPDNAGCPSTCGCNKLGSTED--ACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISS 80
A+G C C C L + +C T +C+C+ G G CD + +
Sbjct: 322 ARGRFGLQCKQKCTCPGLEFQDSNASCDAKTGECQCESGYKGANCDERK------CSADT 375
Query: 81 YAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPG 139
Y D C K C C +V C TG C CKPG G C E GPN
Sbjct: 376 YGAD---CSKQCSCVMSNTVM--CAPNTGFCRCKPGFYGDNC-ELACSKDSYGPNCEKQA 429
Query: 140 M-------EVKPCNGEPPVINLQTGVELDCGSGAN-REDCPSDAY 176
M E P NG+ ++G SGAN + CP D Y
Sbjct: 430 MCDWTHASEADPANGK---CVCKSG-----RSGANCSQPCPIDFY 466
Score = 123 (48.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 49/180 (27%), Positives = 68/180 (37%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAG--CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKC 65
C +YG DN LA D+ G C C+ ++E +C CK G G C
Sbjct: 403 CKPGFYG---DNCELACSKDSYGPNCEKQAMCDWTHASE--ADPANGKCVCKSGRSGANC 457
Query: 66 DRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC-NEC 124
+ P I Y P+ L+C C+ G C G+C C PG G +C + C
Sbjct: 458 SQPCP-------IDFYGPNC--ALQCECNGRGI---GCHGFDGKCNCAPGYTGHRCEHHC 505
Query: 125 LDPNKKLGPN-----GCMPGMEVKPCNGEPPVINLQTGVELD--CGSGANREDCPSDAYC 177
P G N C G+ P GE + G++ D C G+ +C C
Sbjct: 506 --PALTFGANCEKRCQCPAGVGCNPITGECECPAGRQGLKCDISCPEGSYGPECKLHCKC 563
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 45/149 (30%), Positives = 63/149 (42%)
Query: 47 CIEDTEQCKCKQGVGGLKCD-RCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQ 105
C T +C+C G GLKCD C G SY P+ L C C V C+
Sbjct: 526 CNPITGECECPAGRQGLKCDISCPEG--------SYGPECK--LHCKC-----VNGKCDP 570
Query: 106 MTGRCVCKPGVKGSKCN-ECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGS 164
TG C C+PG G+ C+ C P K G + C E+ C+ + QTG + C
Sbjct: 571 ETGECSCEPGFGGADCSTSC--PKGKYG-DAC----ELS-CDCSDSYCSRQTG-KCICPL 621
Query: 165 GANR----EDCPSDAY---CHITQNFARC 186
G + C ++ Y C +T ++C
Sbjct: 622 GKKGTLCDQPCEANTYGPQCQLTTTPSQC 650
Score = 117 (46.2 bits), Expect = 0.00026, P = 0.00026
Identities = 52/194 (26%), Positives = 67/194 (34%)
Query: 8 CLDSWYGCCPDNKTLAQ-GPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCD 66
C DS Y K + G C C N G + QC G+ C
Sbjct: 605 CSDS-YCSRQTGKCICPLGKKGTLCDQPCEANTYGP-QCQLTTTPSQCASTDPRNGV-CL 661
Query: 67 RCEPGYWGLSKISSYAPD----IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN 122
C PG G + P D KC C+ G C+ TG C+C+PG G+ C+
Sbjct: 662 TCPPGSSG-HQCEQNCPQGTYGTDCASKCACADGG---HGCDPTTGECICEPGYHGATCS 717
Query: 123 E-CLDPNKKLG----PN--GCMPGMEVKPCNGE---PPVINLQTGVELDCGSGANREDCP 172
E C P+ K G N C G +G+ P + T CG G C
Sbjct: 718 EKC--PDGKFGYACAQNCPKCAAGSSCDHISGQCVCPAGLEGATCTR-PCGVGFWGNGCR 774
Query: 173 SDAYCHITQNFARC 186
C T F +C
Sbjct: 775 Q--VCRCTSEFKQC 786
>UNIPROTKB|F1MYX9 [details] [associations]
symbol:LAMA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050873 "brown fat cell differentiation" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0050873 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0001568 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 GO:GO:0005606 CTD:3910 KO:K06241
OMA:QLDDYNA EMBL:DAAA02025880 EMBL:DAAA02025869 EMBL:DAAA02025870
EMBL:DAAA02025871 EMBL:DAAA02025872 EMBL:DAAA02025873
EMBL:DAAA02025874 EMBL:DAAA02025875 EMBL:DAAA02025876
EMBL:DAAA02025877 EMBL:DAAA02025878 EMBL:DAAA02025879
IPI:IPI01003454 RefSeq:NP_001192894.1 UniGene:Bt.33367
ProteinModelPortal:F1MYX9 PRIDE:F1MYX9 Ensembl:ENSBTAT00000011612
GeneID:529670 KEGG:bta:529670 NextBio:20875080 Uniprot:F1MYX9
Length = 1824
Score = 152 (58.6 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 49/180 (27%), Positives = 71/180 (39%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE--QCKCKQ 58
+G + + CLD + G +GP P C + + ++C +C CK+
Sbjct: 106 TGEHCEKCLDGYIG------DAIRGPPRFCQPCPCPLPHVANFAESCYRKNGAVRCICKE 159
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGS---VREDCEQMTGRCV-CKP 114
G C+RC PGY+G + C KC CS + EDC+++TG+C C
Sbjct: 160 NYAGPNCERCAPGYYGNPLLIGST-----CKKCDCSGNSDPNLIFEDCDEVTGQCRNCLR 214
Query: 115 GVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCG-SGANREDCPS 173
G KC C P G C G P + TG L+ G DCP+
Sbjct: 215 NTTGFKCERCA-PGY-YGDARRAKNCAACNCGGGP--CDSITGECLEEGFESPTGTDCPT 270
>UNIPROTKB|E1C393 [details] [associations]
symbol:MEGF10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001891 "phagocytic cup" evidence=IEA]
[GO:0014719 "satellite cell activation" evidence=IEA] [GO:0014816
"satellite cell differentiation" evidence=IEA] [GO:0014841
"satellite cell proliferation" evidence=IEA] [GO:0034109 "homotypic
cell-cell adhesion" evidence=IEA] [GO:0043654 "recognition of
apoptotic cell" evidence=IEA] [GO:0048641 "regulation of skeletal
muscle tissue development" evidence=IEA] [GO:0051147 "regulation of
muscle cell differentiation" evidence=IEA] [GO:0055001 "muscle cell
development" evidence=IEA] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0034109
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0051147 OMA:FGCNLTC
GO:GO:0014719 GO:GO:0014841 EMBL:AADN02073828 EMBL:AADN02073829
EMBL:AADN02073830 IPI:IPI00580976 ProteinModelPortal:E1C393
Ensembl:ENSGALT00000023694 Uniprot:E1C393
Length = 1132
Score = 148 (57.2 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 43/131 (32%), Positives = 58/131 (44%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
CL W G D+ A+G C +C C K G++ C D C+C G G C R
Sbjct: 561 CLPGWSGIHCDS-VCAEGQWGPNCSLSCYC-KNGAS---CSPDDGICECAPGYRGTTCQR 615
Query: 68 -CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
C PG++G + S P C+ G C +TG C C PG G+ CNE
Sbjct: 616 ICSPGFYG-HRCSQTCPQ---CVHSS----GP----CHHITGLCDCLPGFTGALCNEVC- 662
Query: 127 PNKKLGPNGCM 137
P+ + G N C+
Sbjct: 663 PSGRFGKN-CI 672
Score = 138 (53.6 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 57/195 (29%), Positives = 72/195 (36%)
Query: 7 SCLDSWYGC-CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKC 65
SC W G C N+T + G C C C G+ C T +C C G G C
Sbjct: 388 SCKPGWSGLYC--NETCSPGFYGKSCQQICSCQN-GAD---CDSVTGKCICASGFKGADC 441
Query: 66 DR-CEPGYWGLS-------KISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVK 117
C PG +G++ K + +DG C G DC C G
Sbjct: 442 GTPCLPGTYGVNCSSVCNCKNEAICSSVDGSCTCKAGWHGV---DCS-----INCPSGTW 493
Query: 118 GSKCN---ECLDP---NKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
G CN +CL+ N G C PG + C E P + G +DC A R DC
Sbjct: 494 GLGCNLTCQCLNGGACNALDGTCTCAPGWRGEKC--ELPCQDGTYG--MDC---AERCDC 546
Query: 172 PSDAYCHITQNFARC 186
CH T + RC
Sbjct: 547 SHADGCHPTTGYCRC 561
Score = 127 (49.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 59/209 (28%), Positives = 73/209 (34%)
Query: 2 GIYLKSC---LDSWYGCCPDNKT----LAQGPDNAGC-----PSTCG--CNKLGS--TED 45
G Y KSC G D+ T A G A C P T G C+ + + E
Sbjct: 405 GFYGKSCQQICSCQNGADCDSVTGKCICASGFKGADCGTPCLPGTYGVNCSSVCNCKNEA 464
Query: 46 ACIEDTEQCKCKQGVGGLKCD-RCEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDC 103
C C CK G G+ C C G WGL GC L C C G+ C
Sbjct: 465 ICSSVDGSCTCKAGWHGVDCSINCPSGTWGL-----------GCNLTCQCLNGGA----C 509
Query: 104 EQMTGRCVCKPGVKGSKCN-ECLDPNKKLGPN---GCMPGMEVKPCNGEPPVINLQTGVE 159
+ G C C PG +G KC C D + C P G + +G+
Sbjct: 510 NALDGTCTCAPGWRGEKCELPCQDGTYGMDCAERCDCSHADGCHPTTGYCRCLPGWSGIH 569
Query: 160 LD--CGSGANREDCPSDAYCHITQNFARC 186
D C G +C YC +N A C
Sbjct: 570 CDSVCAEGQWGPNCSLSCYC---KNGASC 595
Score = 123 (48.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 54/194 (27%), Positives = 70/194 (36%)
Query: 8 CLDSW-YGCC--PDNKTLAQGPDNAGCPSTCGCNKLG---STEDACIED------TEQCK 55
C D +G C P+ G C S C + G S+ C T C
Sbjct: 109 CADKCVHGRCIAPNTCQCEPGWGGPNCSSACDSDHWGPHCSSRCQCKNGALCNPITGACH 168
Query: 56 CKQGVGGLKCD-RCEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCK 113
C G G +C+ RC+ G +G + C KC C Q G+ C+ +TG C C
Sbjct: 169 CASGFKGWRCEERCDQGTYG-----------NDCHQKCQC-QNGAT---CDHVTGECRCP 213
Query: 114 PGVKGSKCNECLDPNKKLGPN-----GCMPGMEVKPCNGE---PPVINLQTGV-ELDCGS 164
PG G+ C + P K GP C G GE PP Q V C
Sbjct: 214 PGYTGAFCEDLCPPGKH-GPQCEERCPCQNGGICHHVTGECACPPGWMTQGMVCGQPCPE 272
Query: 165 GANREDCPSDAYCH 178
G +C + CH
Sbjct: 273 GRYGNNCSQECQCH 286
Score = 121 (47.7 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 44/150 (29%), Positives = 53/150 (35%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR--CEPGYWGLSKISSYAPDIDGC 88
C TC C G C + C C+ G G C+ C G +GL K
Sbjct: 322 CAETCQCMNGGK----CYHISGACLCEPGYTGEHCETRLCPEGVYGL-KCDK-------- 368
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGE 148
KC C + C M+G C CKPG G CNE C PG K C
Sbjct: 369 -KCPCHLHNTW--SCHPMSGECSCKPGWSGLYCNET-----------CSPGFYGKSCQ-- 412
Query: 149 PPVINLQTGVELD-------CGSGANREDC 171
+ + Q G + D C SG DC
Sbjct: 413 -QICSCQNGADCDSVTGKCICASGFKGADC 441
>MGI|MGI:2685177 [details] [associations]
symbol:Megf10 "multiple EGF-like-domains 10" species:10090
"Mus musculus" [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006909 "phagocytosis" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007517 "muscle organ
development" evidence=IEA] [GO:0014719 "satellite cell activation"
evidence=IMP] [GO:0014816 "satellite cell differentiation"
evidence=ISO;IMP] [GO:0014841 "satellite cell proliferation"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0034109 "homotypic
cell-cell adhesion" evidence=ISO] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043654 "recognition of apoptotic cell"
evidence=IMP;IDA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=ISO] [GO:0051147 "regulation of muscle cell
differentiation" evidence=ISO] [GO:0055001 "muscle cell
development" evidence=ISO] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 MGI:MGI:2685177
GO:GO:0016021 GO:GO:0016323 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042995 GO:GO:0001891 GO:GO:0048641 PROSITE:PS01186
eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 HOGENOM:HOG000294130
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0043654 HSSP:P01132
GO:GO:0051147 CTD:84466 HOVERGEN:HBG108333 OMA:FGCNLTC
GO:GO:0014719 GO:GO:0014841 EMBL:AK147238 EMBL:AK148084
EMBL:AK166316 EMBL:BC075647 IPI:IPI00453778 RefSeq:NP_001001979.1
UniGene:Mm.297863 ProteinModelPortal:Q6DIB5 SMR:Q6DIB5
STRING:Q6DIB5 PhosphoSite:Q6DIB5 PRIDE:Q6DIB5
Ensembl:ENSMUST00000075770 Ensembl:ENSMUST00000139892 GeneID:70417
KEGG:mmu:70417 UCSC:uc008eyz.2 InParanoid:Q6DIB5 OrthoDB:EOG42JNQJ
ChiTaRS:MEGF10 NextBio:331567 Bgee:Q6DIB5 CleanEx:MM_MEGF10
Genevestigator:Q6DIB5 Uniprot:Q6DIB5
Length = 1147
Score = 148 (57.2 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 42/125 (33%), Positives = 59/125 (47%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGCL 89
C C C+ L +T +C + +C CK G GL C+ C PG++G + C
Sbjct: 364 CDKRCPCH-LDNTH-SCHPMSGECGCKPGWSGLYCNETCSPGFYG-----------EACQ 410
Query: 90 K-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE-CLDPNKKLGPN-----GCMPGMEV 142
+ C C Q G+ DC+ +TGRC C PG KG+ C+ C P + G N GC
Sbjct: 411 QICSC-QNGA---DCDSVTGRCACAPGFKGTDCSTPC--PLGRYGINCSSRCGCKNDAVC 464
Query: 143 KPCNG 147
P +G
Sbjct: 465 SPVDG 469
Score = 144 (55.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 42/128 (32%), Positives = 55/128 (42%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
CL W G D+ A+G C C C K G++ C D C+C G G C R
Sbjct: 559 CLPGWSGVHCDS-VCAEGRWGPNCSLPCYC-KNGAS---CSPDDGICECAPGFRGTTCQR 613
Query: 68 -CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
C PG++G + S P C+ G C +TG C C PG G+ CNE
Sbjct: 614 ICSPGFYG-HRCSQTCPQ---CVHSS----GP----CHHITGLCDCLPGFTGALCNEVC- 660
Query: 127 PNKKLGPN 134
P+ + G N
Sbjct: 661 PSGRFGKN 668
Score = 137 (53.3 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 53/182 (29%), Positives = 69/182 (37%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAG--CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKC 65
C W G N + A D+ G C S C C C T C C G G +C
Sbjct: 126 CEPGWGGT---NCSSACDGDHWGPHCSSRCQCKNRA----LCNPITGACHCAAGYRGWRC 178
Query: 66 -DRCEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
DRCE G +G + C +C C Q G+ C+ +TG C C PG G+ C +
Sbjct: 179 EDRCEQGTYG-----------NDCHQRCQC-QNGAT---CDHITGECRCSPGYTGAFCED 223
Query: 124 CLDPNKKLGPN-----GCMPGMEVKPCNGEP--PVINLQTGVELDCGSGANREDCPSDAY 176
P K GP+ C G GE P + T C G ++C +
Sbjct: 224 LCPPGKH-GPHCEQRCPCQNGGVCHHVTGECSCPSGWMGTVCGQPCPEGRFGKNCSQECQ 282
Query: 177 CH 178
CH
Sbjct: 283 CH 284
Score = 135 (52.6 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 56/186 (30%), Positives = 67/186 (36%)
Query: 15 CCPDNKTLAQGPD-NAGCP-STCGCN---KLGSTEDA-CIEDTEQCKCKQGVGGLKCD-R 67
C P K G D + CP G N + G DA C C CK G G+ C R
Sbjct: 430 CAPGFK----GTDCSTPCPLGRYGINCSSRCGCKNDAVCSPVDGSCICKAGWHGVDCSIR 485
Query: 68 CEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN-ECL 125
C G WG GC L C C G+ C + G C C PG +G+KC C
Sbjct: 486 CPSGTWGF-----------GCNLTCQCLNGGA----CNTLDGTCTCAPGWRGAKCEFPCQ 530
Query: 126 DPNKKLGPN---GCMPGMEVKPCNGEPPVINLQTGVELD--CGSGANREDCPSDAYCHIT 180
D L C P G + +GV D C G +C YC
Sbjct: 531 DGTYGLNCAERCDCSHADGCHPTTGHCRCLPGWSGVHCDSVCAEGRWGPNCSLPCYC--- 587
Query: 181 QNFARC 186
+N A C
Sbjct: 588 KNGASC 593
Score = 125 (49.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 53/173 (30%), Positives = 67/173 (38%)
Query: 8 CLDSW-YGCC--PDNKTLAQGPDNAGCPSTCGCNKLG---------STEDACIEDTEQCK 55
C D +G C P+ G C S C + G C T C
Sbjct: 109 CADKCVHGRCIAPNTCQCEPGWGGTNCSSACDGDHWGPHCSSRCQCKNRALCNPITGACH 168
Query: 56 CKQGVGGLKC-DRCEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCK 113
C G G +C DRCE G +G + C +C C Q G+ C+ +TG C C
Sbjct: 169 CAAGYRGWRCEDRCEQGTYG-----------NDCHQRCQC-QNGAT---CDHITGECRCS 213
Query: 114 PGVKGSKCNECLDPNKKLGPNGCMPGMEVKPC-NGEPPVINLQTGVELDCGSG 165
PG G+ C + P K GP+ C PC NG V + TG E C SG
Sbjct: 214 PGYTGAFCEDLCPPGKH-GPH-CEQRC---PCQNGG--VCHHVTG-ECSCPSG 258
Score = 116 (45.9 bits), Expect = 0.00035, P = 0.00035
Identities = 55/194 (28%), Positives = 68/194 (35%)
Query: 8 CLDSWYGC-CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCD 66
C W G C N+T + G C C C G+ C T +C C G G C
Sbjct: 387 CKPGWSGLYC--NETCSPGFYGEACQQICSCQN-GAD---CDSVTGRCACAPGFKGTDCS 440
Query: 67 R-CEPGYWGLS-------KISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
C G +G++ K + +DG C G DC C G G
Sbjct: 441 TPCPLGRYGINCSSRCGCKNDAVCSPVDGSCICKAGWHGV---DCSIR-----CPSGTWG 492
Query: 119 SKCN---ECLDP---NKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCP 172
CN +CL+ N G C PG C E P + G L+C A R DC
Sbjct: 493 FGCNLTCQCLNGGACNTLDGTCTCAPGWRGAKC--EFPCQDGTYG--LNC---AERCDCS 545
Query: 173 SDAYCHITQNFARC 186
CH T RC
Sbjct: 546 HADGCHPTTGHCRC 559
>UNIPROTKB|F1NEW2 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
GeneTree:ENSGT00700000104042 EMBL:AADN02049477 EMBL:AADN02049478
IPI:IPI01017205 Ensembl:ENSGALT00000014992 OMA:THKKACK
Uniprot:F1NEW2
Length = 336
Score = 140 (54.3 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 31/109 (28%), Positives = 46/109 (42%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
C+ G C C+ G++ +S D C C C G+ + C Q TG+C CK G
Sbjct: 103 CRHNTAGRHCHYCKEGFY--RDLSKSITDRKACKACDCHPVGAAGKTCNQTTGQCPCKDG 160
Query: 116 VKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGS 164
V G CN C ++ + P +++ N P + T DC S
Sbjct: 161 VTGLTCNRCAKGFQQ-SRSPVAPCIKIPAIN--PTSLVTSTEAPADCDS 206
Score = 121 (47.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 40/154 (25%), Positives = 61/154 (39%)
Query: 35 CGCNKLGSTEDACIEDTEQ---CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKC 91
C CN S C++D EQ C CK G +CDRC+P ++ + A + + CL C
Sbjct: 17 CKCNGHASR---CVKDKEQKLVCDCKHNTEGPECDRCKPFHYDRPWQRASAREANECLAC 73
Query: 92 GCSQFGS-VREDCE--QMTGR-----CV-CKPGVKGSKCNECL-----DPNKKLGPNGCM 137
C+ R + E +++GR C+ C+ G C+ C D +K +
Sbjct: 74 NCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKSITDRKAC 133
Query: 138 PGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
+ P N TG + C G C
Sbjct: 134 KACDCHPVGAAGKTCNQTTG-QCPCKDGVTGLTC 166
Score = 113 (44.8 bits), Expect = 0.00015, P = 0.00015
Identities = 33/98 (33%), Positives = 43/98 (43%)
Query: 27 DNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
D C + C C+ +G+ C + T QC CK GV GL C+RC G+ S+ S AP
Sbjct: 129 DRKACKA-CDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAKGFQQ-SR-SPVAP--- 182
Query: 87 GCLKCGCSQFGSVREDCEQMTGRC--VCKPGVKGSKCN 122
C+K S+ E C CKP K N
Sbjct: 183 -CIKIPAINPTSLVTSTEAPAD-CDSYCKPAKGNYKIN 218
>UNIPROTKB|E2RQ32 [details] [associations]
symbol:MEGF10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0055001 "muscle cell development"
evidence=IEA] [GO:0051147 "regulation of muscle cell
differentiation" evidence=IEA] [GO:0048641 "regulation of skeletal
muscle tissue development" evidence=IEA] [GO:0043654 "recognition
of apoptotic cell" evidence=IEA] [GO:0034109 "homotypic cell-cell
adhesion" evidence=IEA] [GO:0014841 "satellite cell proliferation"
evidence=IEA] [GO:0014816 "satellite cell differentiation"
evidence=IEA] [GO:0014719 "satellite cell activation" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 Pfam:PF12661
GeneTree:ENSGT00690000101691 GO:GO:0043654 GO:GO:0051147
OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841 EMBL:AAEX03007755
ProteinModelPortal:E2RQ32 Ensembl:ENSCAFT00000000947 Uniprot:E2RQ32
Length = 1150
Score = 147 (56.8 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 47/157 (29%), Positives = 67/157 (42%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGCL 89
C C C+ L +T +C + +C CK G GL C+ C PG++G + C
Sbjct: 364 CDKRCPCH-LDNTH-SCHPMSGECACKPGWSGLYCNETCSPGFFG-----------EACQ 410
Query: 90 K-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN-ECLDPNKKLGPN-----GCMPGMEV 142
+ C C G+ DC+ +TG+C+C PG KG C+ C P + G N GC
Sbjct: 411 QICSCHN-GA---DCDSVTGKCICAPGFKGIDCSIPC--PLETYGINCSSLCGCKNDAVC 464
Query: 143 KPCNGEPPVINLQTGVE--LDCGSGANREDCPSDAYC 177
P +G GV+ + C SG C C
Sbjct: 465 SPVDGSCTCKAGWHGVDCSISCPSGTWGFSCNLTCQC 501
Score = 144 (55.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 42/128 (32%), Positives = 55/128 (42%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
CL W G D+ A+G C C C K G++ C D C+C G G C R
Sbjct: 559 CLPGWSGVHCDS-VCAEGRWGPNCSLPCYC-KNGAS---CSPDDGICECAPGFRGTTCQR 613
Query: 68 -CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
C PG++G + S P C+ G C +TG C C PG G+ CNE
Sbjct: 614 ICSPGFYG-HRCSQTCPQ---CVHSS----GP----CHHITGLCDCLPGFTGALCNEVC- 660
Query: 127 PNKKLGPN 134
P+ + G N
Sbjct: 661 PSGRFGKN 668
Score = 125 (49.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 53/192 (27%), Positives = 70/192 (36%)
Query: 8 CLDSW-YGCC--PDNKTLAQGPDNAGCPSTCG-------CNKLGSTEDA--CIEDTEQCK 55
C D +G C P+ G C S C C+ ++ C T C
Sbjct: 109 CADKCVHGRCIAPNTCQCEPGWGGTNCSSACDGDHWGPHCSSRCQCKNGALCNPITGACH 168
Query: 56 CKQGVGGLKC-DRCEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCK 113
C G G +C DRCE G +G + C +C C Q G+ C+ +TG C C
Sbjct: 169 CAAGFRGWRCEDRCEQGTYG-----------NDCHQRCQC-QNGAT---CDHVTGECRCP 213
Query: 114 PGVKGSKCNECLDPNKKLGPN-----GCMPGMEVKPCNGEP--PVINLQTGVELDCGSGA 166
PG G+ C + P K GP C G GE P L T C G
Sbjct: 214 PGYTGAFCEDLCPPGKH-GPQCEQRCPCQNGGICHHVTGECSCPSGWLGTVCGQPCPEGR 272
Query: 167 NREDCPSDAYCH 178
++C + CH
Sbjct: 273 FGKNCSQECQCH 284
Score = 122 (48.0 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 51/169 (30%), Positives = 60/169 (35%)
Query: 31 CP-STCG--CNKL-GSTEDA-CIEDTEQCKCKQGVGGLKCD-RCEPGYWGLSKISSYAPD 84
CP T G C+ L G DA C C CK G G+ C C G WG S
Sbjct: 443 CPLETYGINCSSLCGCKNDAVCSPVDGSCTCKAGWHGVDCSISCPSGTWGFS-------- 494
Query: 85 IDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN-ECLDPNKKLGPNGCMPGMEV 142
C L C C G+ C G C C PG +G KC C D L
Sbjct: 495 ---CNLTCQCLHGGA----CNTQDGTCTCAPGWRGDKCELPCQDGTYGLNCAERCDCSHA 547
Query: 143 KPCN---GEPPVINLQTGVELD--CGSGANREDCPSDAYCHITQNFARC 186
C+ G + +GV D C G +C YC +N A C
Sbjct: 548 DGCHSTTGHCRCLPGWSGVHCDSVCAEGRWGPNCSLPCYC---KNGASC 593
Score = 121 (47.7 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 54/185 (29%), Positives = 71/185 (38%)
Query: 7 SCLDSWYGC-CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKC 65
SC W G C + +G C C C+ G T DA T QC C G G +C
Sbjct: 254 SCPSGWLGTVC--GQPCPEGRFGKNCSQECQCHN-GGTCDAA---TGQCHCSPGYTGERC 307
Query: 66 -DRCEPGYWGLSKISSYAPDIDG--CL----KCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
D C G +G+ + + ++G C C C + G E CE +C G+ G
Sbjct: 308 QDECPVGTYGV-RCAETCQCVNGGKCYHVSGSCLC-EAGFAGEHCEAR----LCPEGLYG 361
Query: 119 SKCNE-C---LDPNKKLGP-NG---CMPGMEVKPCNG--EPPVINLQTGVELDCGSGANR 168
KC++ C LD P +G C PG CN P C +GA
Sbjct: 362 IKCDKRCPCHLDNTHSCHPMSGECACKPGWSGLYCNETCSPGFFGEACQQICSCHNGA-- 419
Query: 169 EDCPS 173
DC S
Sbjct: 420 -DCDS 423
Score = 118 (46.6 bits), Expect = 0.00020, P = 0.00020
Identities = 54/195 (27%), Positives = 70/195 (35%)
Query: 7 SCLDSWYGC-CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKC 65
+C W G C N+T + G C C C+ G+ C T +C C G G+ C
Sbjct: 386 ACKPGWSGLYC--NETCSPGFFGEACQQICSCHN-GAD---CDSVTGKCICAPGFKGIDC 439
Query: 66 D-RCEPGYWGLS-------KISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVK 117
C +G++ K + +DG C G DC C G
Sbjct: 440 SIPCPLETYGINCSSLCGCKNDAVCSPVDGSCTCKAGWHGV---DCS-----ISCPSGTW 491
Query: 118 GSKCN---ECLDP---NKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
G CN +CL N + G C PG C E P + G L+C A R DC
Sbjct: 492 GFSCNLTCQCLHGGACNTQDGTCTCAPGWRGDKC--ELPCQDGTYG--LNC---AERCDC 544
Query: 172 PSDAYCHITQNFARC 186
CH T RC
Sbjct: 545 SHADGCHSTTGHCRC 559
>UNIPROTKB|F1NK85 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
GeneTree:ENSGT00700000104042 EMBL:AADN02049477 EMBL:AADN02049478
IPI:IPI00819575 Ensembl:ENSGALT00000039263 Uniprot:F1NK85
Length = 330
Score = 139 (54.0 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 43/139 (30%), Positives = 56/139 (40%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
C+ G C C+ G++ +S D C C C G+ + C Q TG+C CK G
Sbjct: 100 CRHNTAGRHCHYCKEGFY--RDLSKSITDRKACKACDCHPVGAAGKTCNQTTGQCPCKDG 157
Query: 116 VKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSDA 175
V G CN C K P V PC E +T L C S A DC D+
Sbjct: 158 VTGLTCNRCA----KGFQQSRSP---VAPCISESCA---RTTCTL-CSSPA---DC--DS 201
Query: 176 YCHITQ-----NFARCCRK 189
YC + N + C+K
Sbjct: 202 YCKPAKGNYKINMKKYCKK 220
Score = 132 (51.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 34/97 (35%), Positives = 46/97 (47%)
Query: 27 DNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDI- 85
D C + C C+ +G+ C + T QC CK GV GL C+RC G+ S+ S AP I
Sbjct: 126 DRKACKA-CDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAKGFQQ-SR-SPVAPCIS 182
Query: 86 DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN 122
+ C + C+ S DC+ CKP K N
Sbjct: 183 ESCARTTCTLCSSPA-DCDSY-----CKPAKGNYKIN 213
Score = 121 (47.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 40/154 (25%), Positives = 61/154 (39%)
Query: 35 CGCNKLGSTEDACIEDTEQ---CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKC 91
C CN S C++D EQ C CK G +CDRC+P ++ + A + + CL C
Sbjct: 14 CKCNGHASR---CVKDKEQKLVCDCKHNTEGPECDRCKPFHYDRPWQRASAREANECLAC 70
Query: 92 GCSQFGS-VREDCE--QMTGR-----CV-CKPGVKGSKCNECL-----DPNKKLGPNGCM 137
C+ R + E +++GR C+ C+ G C+ C D +K +
Sbjct: 71 NCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKSITDRKAC 130
Query: 138 PGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
+ P N TG + C G C
Sbjct: 131 KACDCHPVGAAGKTCNQTTG-QCPCKDGVTGLTC 163
>UNIPROTKB|J9P5A2 [details] [associations]
symbol:CELSR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001879 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR017983 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205
PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00008 SMART:SM00112 SMART:SM00179 SMART:SM00181
SMART:SM00303 InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624
Pfam:PF12003 Gene3D:2.60.40.60 GeneTree:ENSGT00700000104170
Pfam:PF02210 EMBL:AAEX03007209 EMBL:AAEX03007210 EMBL:AAEX03007211
EMBL:AAEX03007212 EMBL:AAEX03007213 EMBL:AAEX03007214
EMBL:AAEX03007215 Ensembl:ENSCAFT00000048271 Uniprot:J9P5A2
Length = 2668
Score = 139 (54.0 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 25/54 (46%), Positives = 31/54 (57%)
Query: 83 PDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGC 136
PD D CL C C GS C+ TG+CVCK GV G +CN C +P ++ GC
Sbjct: 1712 PDQDACLPCDCFPHGSHSRACDMDTGQCVCKSGVIGRQCNRCDNPFAEVTTLGC 1765
Score = 41 (19.5 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 50 DTEQCKCKQGVGGLKC-DRC 68
D C C +G G KC D C
Sbjct: 1609 DGYSCVCDKGYFGRKCVDVC 1628
Score = 39 (18.8 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 54 CKCKQGVGGLKCDRCEP 70
C+C GG C++ P
Sbjct: 1390 CECPLRFGGKNCEQVMP 1406
>UNIPROTKB|Q90922 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0071944 "cell
periphery" evidence=IDA] InterPro:IPR001134 PROSITE:PS50189
GO:GO:0005578 PROSITE:PS00022 GO:GO:0071944 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 EMBL:L34549 IPI:IPI00570611 PIR:A54665
RefSeq:NP_990750.1 UniGene:Gga.794 ProteinModelPortal:Q90922
IntAct:Q90922 STRING:Q90922 GeneID:396389 KEGG:gga:396389
eggNOG:NOG237372 HOVERGEN:HBG006464 KO:K06843 NextBio:20816431
Uniprot:Q90922
Length = 606
Score = 143 (55.4 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 34/110 (30%), Positives = 49/110 (44%)
Query: 56 CKQGVGGLKCDRCEPGYW-GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKP 114
C+ G C C+ G++ LSK S+ C +C C G+ + C Q TG+C CK
Sbjct: 373 CRHNTAGRHCHYCKEGFYRDLSKPISHRK---ACKECDCHPVGAAGQTCNQTTGQCPCKD 429
Query: 115 GVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGS 164
GV G CN C ++ + P +++ P PP T DC S
Sbjct: 430 GVTGITCNRCAKGYQQ-SRSPIAPCIKI-PA-APPPTAASSTEEPADCDS 476
Score = 110 (43.8 bits), Expect = 0.00087, P = 0.00087
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGY 72
C C+ +G+ C + T QC CK GV G+ C+RC GY
Sbjct: 406 CDCHPVGAAGQTCNQTTGQCPCKDGVTGITCNRCAKGY 443
>UNIPROTKB|F1PLY1 [details] [associations]
symbol:CELSR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001879 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR017983 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205
PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00008 SMART:SM00112 SMART:SM00179 SMART:SM00181
SMART:SM00303 InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624
Pfam:PF12003 Gene3D:2.60.40.60 GeneTree:ENSGT00700000104170
Pfam:PF02210 OMA:NKPNIGH EMBL:AAEX03007209 EMBL:AAEX03007210
EMBL:AAEX03007211 EMBL:AAEX03007212 EMBL:AAEX03007213
EMBL:AAEX03007214 EMBL:AAEX03007215 Ensembl:ENSCAFT00000001204
Uniprot:F1PLY1
Length = 2725
Score = 139 (54.0 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 25/54 (46%), Positives = 31/54 (57%)
Query: 83 PDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGC 136
PD D CL C C GS C+ TG+CVCK GV G +CN C +P ++ GC
Sbjct: 1790 PDQDACLPCDCFPHGSHSRACDMDTGQCVCKSGVIGRQCNRCDNPFAEVTTLGC 1843
Score = 41 (19.5 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 50 DTEQCKCKQGVGGLKC-DRC 68
D C C +G G KC D C
Sbjct: 1687 DGYSCVCDKGYFGRKCVDVC 1706
Score = 39 (18.8 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 54 CKCKQGVGGLKCDRCEP 70
C+C GG C++ P
Sbjct: 1468 CECPLRFGGKNCEQVMP 1484
>UNIPROTKB|F1MAP4 [details] [associations]
symbol:Megf10 "Protein Megf10" species:10116 "Rattus
norvegicus" [GO:0001891 "phagocytic cup" evidence=IEA] [GO:0014719
"satellite cell activation" evidence=IEA] [GO:0014816 "satellite
cell differentiation" evidence=IEA] [GO:0014841 "satellite cell
proliferation" evidence=IEA] [GO:0034109 "homotypic cell-cell
adhesion" evidence=IEA] [GO:0043654 "recognition of apoptotic cell"
evidence=IEA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=IEA] [GO:0051147 "regulation of muscle cell
differentiation" evidence=IEA] [GO:0055001 "muscle cell
development" evidence=IEA] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 RGD:735084
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 Pfam:PF12661
GeneTree:ENSGT00690000101691 GO:GO:0043654 GO:GO:0051147 CTD:84466
OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841 EMBL:AC095558
IPI:IPI00371424 RefSeq:NP_001094127.1 UniGene:Rn.224926
Ensembl:ENSRNOT00000037901 GeneID:291445 KEGG:rno:291445
NextBio:632612 Uniprot:F1MAP4
Length = 1145
Score = 146 (56.5 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 48/157 (30%), Positives = 68/157 (43%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGCL 89
C C C+ L +T +C + +C CK G GL C+ C PG++G + C
Sbjct: 364 CDKRCPCH-LDNTH-SCHPMSGECGCKPGWSGLYCNETCSPGFYG-----------EACQ 410
Query: 90 K-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE-CLDPNKKLGPN-----GCMPGMEV 142
+ C C Q G+ DC+ ++GRC C PG KG+ C+ C P + G N GC
Sbjct: 411 QICSC-QNGA---DCDSVSGRCACAPGFKGTDCSTPC--PLGRYGINCSSRCGCKNDAVC 464
Query: 143 KPCNGEPPVINLQTGVE--LDCGSGANREDCPSDAYC 177
P +G GV+ + C SG C C
Sbjct: 465 SPVDGSCICKAGWHGVDCSISCPSGTWGFGCNLTCQC 501
Score = 144 (55.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 42/128 (32%), Positives = 55/128 (42%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
CL W G D+ A+G C C C K G++ C D C+C G G C R
Sbjct: 559 CLPGWSGVHCDS-VCAEGRWGPNCSLPCYC-KNGAS---CSPDDGICECAPGFRGTTCQR 613
Query: 68 -CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
C PG++G + S P C+ G C +TG C C PG G+ CNE
Sbjct: 614 ICSPGFYG-HRCSQTCPQ---CVHSS----GP----CHHITGLCDCLPGFTGALCNEVC- 660
Query: 127 PNKKLGPN 134
P+ + G N
Sbjct: 661 PSGRFGKN 668
Score = 136 (52.9 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 53/182 (29%), Positives = 68/182 (37%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAG--CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKC 65
C W G N + A D+ G C S C C C T C C G G +C
Sbjct: 126 CEPGWGGT---NCSSACDGDHWGPHCSSRCQCKNRA----LCNPITGACHCAAGYRGWRC 178
Query: 66 -DRCEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
DRCE G +G + C +C C Q G+ C+ +TG C C PG G+ C +
Sbjct: 179 EDRCEQGTYG-----------NDCHQRCQC-QNGAT---CDHITGECRCSPGYTGAFCED 223
Query: 124 CLDPNKKLGPN-----GCMPGMEVKPCNGEP--PVINLQTGVELDCGSGANREDCPSDAY 176
P K GP C G GE P + T C G ++C +
Sbjct: 224 LCPPGKH-GPQCEQRCPCQNGGVCHHVTGECSCPSGWMGTVCGQPCPEGRFGKNCSQECQ 282
Query: 177 CH 178
CH
Sbjct: 283 CH 284
Score = 128 (50.1 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 55/186 (29%), Positives = 65/186 (34%)
Query: 15 CCPDNKTLAQGPD-NAGCP-STCGCN---KLGSTEDA-CIEDTEQCKCKQGVGGLKCD-R 67
C P K G D + CP G N + G DA C C CK G G+ C
Sbjct: 430 CAPGFK----GTDCSTPCPLGRYGINCSSRCGCKNDAVCSPVDGSCICKAGWHGVDCSIS 485
Query: 68 CEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN-ECL 125
C G WG GC L C C G+ C + G C C PG +G KC C
Sbjct: 486 CPSGTWGF-----------GCNLTCQCLNGGA----CNTLDGTCTCAPGWRGEKCEFPCQ 530
Query: 126 DPNKKLGPN---GCMPGMEVKPCNGEPPVINLQTGVELD--CGSGANREDCPSDAYCHIT 180
D L C P G + +GV D C G +C YC
Sbjct: 531 DGTYGLNCAERCDCSHADGCHPTTGHCRCLPGWSGVHCDSVCAEGRWGPNCSLPCYC--- 587
Query: 181 QNFARC 186
+N A C
Sbjct: 588 KNGASC 593
Score = 124 (48.7 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 53/173 (30%), Positives = 66/173 (38%)
Query: 8 CLDSW-YGCC--PDNKTLAQGPDNAGCPSTCGCNKLG---------STEDACIEDTEQCK 55
C D +G C P+ G C S C + G C T C
Sbjct: 109 CADKCVHGRCIAPNTCQCEPGWGGTNCSSACDGDHWGPHCSSRCQCKNRALCNPITGACH 168
Query: 56 CKQGVGGLKC-DRCEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCK 113
C G G +C DRCE G +G + C +C C Q G+ C+ +TG C C
Sbjct: 169 CAAGYRGWRCEDRCEQGTYG-----------NDCHQRCQC-QNGAT---CDHITGECRCS 213
Query: 114 PGVKGSKCNECLDPNKKLGPNGCMPGMEVKPC-NGEPPVINLQTGVELDCGSG 165
PG G+ C + P K GP C PC NG V + TG E C SG
Sbjct: 214 PGYTGAFCEDLCPPGKH-GPQ-CEQRC---PCQNGG--VCHHVTG-ECSCPSG 258
>UNIPROTKB|Q16363 [details] [associations]
symbol:LAMA4 "Laminin subunit alpha-4" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0001568
"blood vessel development" evidence=IEA] [GO:0050873 "brown fat
cell differentiation" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0005201 "extracellular matrix structural
constituent" evidence=TAS] [GO:0005605 "basal lamina" evidence=TAS]
[GO:0031012 "extracellular matrix" evidence=ISS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0030155
GO:GO:0070062 GO:GO:0050873 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0001568
Pathway_Interaction_DB:amb2_neutrophils_pathway
Pathway_Interaction_DB:foxm1pathway Pfam:PF02210 GO:GO:0045995
GO:GO:0005201 eggNOG:NOG247347 GO:GO:0005606 EMBL:S78569
EMBL:X91171 EMBL:X70904 EMBL:AB210027 EMBL:BT006690 EMBL:Z99289
EMBL:AL590106 EMBL:BC004241 EMBL:Y14240 EMBL:X76939 IPI:IPI00024406
IPI:IPI00329482 IPI:IPI00735310 PIR:S68960 RefSeq:NP_001098676.2
RefSeq:NP_001098677.2 RefSeq:NP_001098678.1 RefSeq:NP_001098679.1
RefSeq:NP_002281.3 UniGene:Hs.654572 ProteinModelPortal:Q16363
SMR:Q16363 IntAct:Q16363 MINT:MINT-1200879 STRING:Q16363
PhosphoSite:Q16363 DMDM:292495093 PaxDb:Q16363 PRIDE:Q16363
DNASU:3910 Ensembl:ENST00000230538 Ensembl:ENST00000368638
Ensembl:ENST00000389463 Ensembl:ENST00000424408
Ensembl:ENST00000453937 Ensembl:ENST00000455073
Ensembl:ENST00000522006 Ensembl:ENST00000578470
Ensembl:ENST00000584877 Ensembl:ENST00000584945 GeneID:3910
KEGG:hsa:3910 UCSC:uc003pvt.2 UCSC:uc003pvu.2 UCSC:uc010kdz.1
CTD:3910 GeneCards:GC06M112475 HGNC:HGNC:6484 HPA:HPA015693
MIM:600133 neXtProt:NX_Q16363 PharmGKB:PA30273 HOVERGEN:HBG052299
InParanoid:Q16363 KO:K06241 OMA:QLDDYNA OrthoDB:EOG4QFWCB
PhylomeDB:Q16363 ChiTaRS:LAMA4 GenomeRNAi:3910 NextBio:15351
ArrayExpress:Q16363 Bgee:Q16363 CleanEx:HS_LAMA4
Genevestigator:Q16363 GermOnline:ENSG00000112769 Uniprot:Q16363
Length = 1823
Score = 148 (57.2 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 50/180 (27%), Positives = 72/180 (40%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTE--QCKCKQ 58
+G + + CLD + G D+ +G P C L + ++C +C C +
Sbjct: 106 TGEHCEKCLDGYIG---DS---IRGAPQFCQPCPCPLPHLANFAESCYRKNGAVRCICNE 159
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGS---VREDCEQMTGRCV-CKP 114
G C+RC PGY+G + C KC CS + EDC+++TG+C C
Sbjct: 160 NYAGPNCERCAPGYYGNPLLIGST-----CKKCDCSGNSDPNLIFEDCDEVTGQCRNCLR 214
Query: 115 GVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCG-SGANREDCPS 173
G KC C P G V C G P + TG L+ G DCP+
Sbjct: 215 NTTGFKCERCA-PGY-YGDARIAKNCAVCNCGGGP--CDSVTGECLEEGFEPPTGMDCPT 270
Score = 120 (47.3 bits), Expect = 0.00018, P = 0.00018
Identities = 49/170 (28%), Positives = 69/170 (40%)
Query: 35 CGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGC 93
C CN G++ + C++ + C C++ G C++C GY G S I AP C C C
Sbjct: 82 CDCN--GNSNE-CLDGSGYCVHCQRNTTGEHCEKCLDGYIGDS-IRG-APQF--CQPCPC 134
Query: 94 S--QFGSVREDCEQMTG--RCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPC---- 145
+ E C + G RC+C G C C P G N + G K C
Sbjct: 135 PLPHLANFAESCYRKNGAVRCICNENYAGPNCERCA-PGY-YG-NPLLIGSTCKKCDCSG 191
Query: 146 NGEPPVI----NLQTGVELDC---GSGANREDCPSDAY--CHITQNFARC 186
N +P +I + TG +C +G E C Y I +N A C
Sbjct: 192 NSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPGYYGDARIAKNCAVC 241
>ZFIN|ZDB-GENE-081028-60 [details] [associations]
symbol:atrnl1a "attractin-like 1a" species:7955
"Danio rerio" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0030246 "carbohydrate
binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001304
InterPro:IPR002165 InterPro:IPR006652 InterPro:IPR015915
InterPro:IPR016201 Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181 ZFIN:ZDB-GENE-081028-60
GO:GO:0016021 GO:GO:0007275 GO:GO:0030246 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0004872
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 SUPFAM:SSF103575 EMBL:AL954359
EMBL:CABZ01039684 EMBL:CABZ01039685 EMBL:CABZ01039686
EMBL:CABZ01039687 EMBL:CABZ01039688 EMBL:CABZ01039689
EMBL:CABZ01039690 EMBL:CABZ01039691 EMBL:CABZ01039692
EMBL:CABZ01039693 EMBL:CABZ01039694 EMBL:CABZ01039695
EMBL:CABZ01039696 EMBL:CR762487 EMBL:CT573136 IPI:IPI00836296
Ensembl:ENSDART00000089533 ArrayExpress:F1Q4X2 Bgee:F1Q4X2
Uniprot:F1Q4X2
Length = 1400
Score = 138 (53.6 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 36/104 (34%), Positives = 48/104 (46%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG-CL 89
CP+ C CN G + C+ + +CK GL C C PGY+G P G C
Sbjct: 1033 CPA-CQCN--GHS--TCVNGSVCEQCKNLTAGLHCQFCLPGYYG-------DPTNGGKCQ 1080
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKP-GVKGSKCNECLDPNKKLG 132
C C+ +V C +G+C C GVKG +C C N+ LG
Sbjct: 1081 ACRCNNHANV---CHSSSGKCYCTTKGVKGDQCQLCDSENRYLG 1121
Score = 35 (17.4 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 1 SGIYLKSCLDSWYGCCPD 18
+G L C DSW G PD
Sbjct: 244 TGEKLCVCNDSWQG--PD 259
>UNIPROTKB|F1M1L0 [details] [associations]
symbol:RGD1565947 "Protein RGD1565947" species:10116
"Rattus norvegicus" [GO:0005576 "extracellular region"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0016322
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
InterPro:IPR018933 Pfam:PF01759 InterPro:IPR008211 Pfam:PF00055
PROSITE:PS51117 GO:GO:0060668 IPI:IPI00948933
Ensembl:ENSRNOT00000064724 ArrayExpress:F1M1L0 Uniprot:F1M1L0
Length = 408
Score = 139 (54.0 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 40/144 (27%), Positives = 52/144 (36%)
Query: 15 CCP--DNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ-----------CK-CKQGV 60
C P +++ G P+ C K D C D C C+
Sbjct: 113 CAPLYNDRPWEAADGRTGAPNECRTCKCNGHADTCHFDINVWEASGNRSGGVCNNCQHNT 172
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED------CEQMTGRCVCKP 114
G C RC+PG++ + APD C C C GS C+ G C CKP
Sbjct: 173 EGQHCQRCKPGFYRDLRRPFSAPD--ACKACSCHPVGSAILPFSSVTFCDPSNGDCPCKP 230
Query: 115 GVKGSKCNECLDPNKKLGPNGCMP 138
GV G C+ C+ G GC P
Sbjct: 231 GVAGPHCDRCMVGYWGFGDYGCRP 254
Score = 125 (49.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 37/116 (31%), Positives = 49/116 (42%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGS------TEDACIEDTEQCK 55
G + + C +Y D + PD C + C C+ +GS + C C
Sbjct: 174 GQHCQRCKPGFYR---DLRRPFSAPD--ACKA-CSCHPVGSAILPFSSVTFCDPSNGDCP 227
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV 111
CK GV G CDRC GYWG Y GC C C+ GS C+ +TG C+
Sbjct: 228 CKPGVAGPHCDRCMVGYWGFG---DY-----GCRPCDCA--GS----CDPLTGDCI 269
Score = 36 (17.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 107 TGRCVCKPGVKGS 119
+G+C CK V G+
Sbjct: 309 SGKCECKEQVLGN 321
>UNIPROTKB|O75095 [details] [associations]
symbol:MEGF6 "Multiple epidermal growth factor-like domains
protein 6" species:9606 "Homo sapiens" [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=NAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR011489 InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005576 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS00010 EMBL:AL512413
EMBL:AB011539 EMBL:AB231860 EMBL:AL513320 IPI:IPI00306850
IPI:IPI00788209 RefSeq:NP_001400.3 UniGene:Hs.593645
ProteinModelPortal:O75095 SMR:O75095 IntAct:O75095
MINT:MINT-2797336 STRING:O75095 PhosphoSite:O75095 PaxDb:O75095
PRIDE:O75095 DNASU:1953 Ensembl:ENST00000294599
Ensembl:ENST00000356575 GeneID:1953 KEGG:hsa:1953 UCSC:uc001akk.3
UCSC:uc001akl.3 CTD:1953 GeneCards:GC01M003396 H-InvDB:HIX0000066
HGNC:HGNC:3232 HPA:HPA052129 MIM:604266 neXtProt:NX_O75095
PharmGKB:PA27665 HOGENOM:HOG000097840 HOVERGEN:HBG079790
OMA:QGAACDP GenomeRNAi:1953 NextBio:7915 Bgee:O75095
CleanEx:HS_MEGF6 Genevestigator:O75095 GermOnline:ENSG00000162591
Uniprot:O75095
Length = 1541
Score = 146 (56.5 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 55/175 (31%), Positives = 64/175 (36%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCD-RCEPGYWGLSKISSYAPDIDGCL 89
C C C AC T C C G G C RC PG +G P GC
Sbjct: 1171 CAQMCQCP---GENPACHPATGTCSCAAGYHGPSCQQRCPPGRYG--------P---GCE 1216
Query: 90 K-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN-ECLDPNKKLGPN-----GCMPGMEV 142
+ CGC GS C+ TG C C G G+ CN C P + GPN GC G
Sbjct: 1217 QLCGCLNGGS----CDAATGACRCPTGFLGTDCNLTC--PQGRFGPNCTHVCGCGQGAAC 1270
Query: 143 KPCNGE---PPVINLQTGVELDCGSGANR-----E---DCPSDAYCHITQNFARC 186
P G PP + GV + G NR E C + CH + C
Sbjct: 1271 DPVTGTCLCPPG---RAGVRCERGCPQNRFGVGCEHTCSCRNGGLCHASNGSCSC 1322
Score = 142 (55.0 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 46/135 (34%), Positives = 57/135 (42%)
Query: 8 CLDSWYGC-CPDNKTLAQGPDNAG--CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLK 64
C + W G C N+T PD G C +C C G T C T C+C GV G
Sbjct: 542 CPEGWTGLIC--NETCP--PDTFGKNCSFSCSCQN-GGT---CDSVTGACRCPPGVSGTN 593
Query: 65 C-DRCEPGYWGLSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN 122
C D C GY+G C K C C+ G C ++ G C+C PG+ G C+
Sbjct: 594 CEDGCPKGYYGKH-----------CRKKCNCANRGR----CHRLYGACLCDPGLYGRFCH 638
Query: 123 -ECLDPNKKLGPNGC 136
C P GP GC
Sbjct: 639 LTC--PPWAFGP-GC 650
Score = 129 (50.5 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 35/109 (32%), Positives = 47/109 (43%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGCL 89
C + C C + + C T C C G G C R C+ G+WG PD
Sbjct: 826 CQTRCSC----ANDGHCHPATGHCSCAPGWTGFSCQRACDTGHWG--------PDCSH-- 871
Query: 90 KCGCSQ-FGSVREDCEQMTGRCVCKPGVKGSKCNE-CLDPNKKLGPNGC 136
C CS GS C+ ++G C+C+ G G +C + C P GP GC
Sbjct: 872 PCNCSAGHGS----CDAISGLCLCEAGYVGPRCEQQC--PQGHFGP-GC 913
Score = 122 (48.0 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 54/191 (28%), Positives = 72/191 (37%)
Query: 16 CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQG-----VGGLKCDRCEP 70
CP + +GP C TC + G C ++ C C G V G +C C P
Sbjct: 977 CPAGR---RGPR---CAETCPAHTYGHN---C---SQACACFNGASCDPVHG-QC-HCAP 1022
Query: 71 GYWGLSKISSYAPDI--DGCL-KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN-ECLD 126
G+ G S + + + D C C C G+ C+ ++G C C G G C ECL
Sbjct: 1023 GWMGPSCLQACPAGLYGDNCRHSCLCQNGGT----CDPVSGHCACPEGWAGLACEKECLP 1078
Query: 127 PNKKLG---PNGCMPGMEVKPCNGEPPVINLQTG--VELDCGSG------ANREDCPSDA 175
+ + G GC+ G P G TG + C G A R CP A
Sbjct: 1079 RDVRAGCRHSGGCLNGGLCDPHTGRCLCPAGWTGDKCQSPCLRGWFGEACAQRCSCPPGA 1138
Query: 176 YCHITQNFARC 186
CH RC
Sbjct: 1139 ACHHVTGACRC 1149
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 52/182 (28%), Positives = 70/182 (38%)
Query: 1 SGIYLKSCLDSWYGC-CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ-CKCKQ 58
+G+Y +C S C C + T + CP G L ++ D C+
Sbjct: 1035 AGLYGDNCRHS---CLCQNGGTCDPVSGHCACPE--GWAGLACEKECLPRDVRAGCRHSG 1089
Query: 59 GV--GGLKCD----RCE-PGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED--CEQMTGR 109
G GGL CD RC P W K S P + G C+Q S C +TG
Sbjct: 1090 GCLNGGL-CDPHTGRCLCPAGWTGDKCQS--PCLRGWFGEACAQRCSCPPGAACHHVTGA 1146
Query: 110 CVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANRE 169
C C PG GS C + P G + C ++ C GE P + TG C +G +
Sbjct: 1147 CRCPPGFTGSGCEQACPPGS-FGED-CA---QMCQCPGENPACHPATGT-CSCAAGYHGP 1200
Query: 170 DC 171
C
Sbjct: 1201 SC 1202
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 46/153 (30%), Positives = 63/153 (41%)
Query: 15 CCPDNKTLAQGPDNAG--CPSTC-------GCNKLGSTEDA--CIEDTEQCKCKQGVGGL 63
C P T GP G C C GC L + C + +C C G G
Sbjct: 1356 CEPATGTCRCGPGFYGQACEHPCPPGFHGAGCQGLCWCQHGAPCDPISGRCLCPAGFHGH 1415
Query: 64 KCDR-CEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
C+R CEPG +G +GC +C C G C+ +TG C+C PG G+ C
Sbjct: 1416 FCERGCEPGSFG-----------EGCHQRCDCD--GGA--PCDPVTGLCLCPPGRSGATC 1460
Query: 122 NECLDPNK-KLGPN-----GCMPGMEVKPCNGE 148
N LD + + GP+ C G + P +G+
Sbjct: 1461 N--LDCRRGQFGPSCTLHCDCGGGADCDPVSGQ 1491
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 50/179 (27%), Positives = 62/179 (34%)
Query: 8 CLDSWYG-CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCD 66
C W G C DN C +C C G T C + C C +G GL C+
Sbjct: 1020 CAPGWMGPSCLQACPAGLYGDN--CRHSCLCQN-GGT---CDPVSGHCACPEGWAGLACE 1073
Query: 67 R-CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE-C 124
+ C P + + GCL G C+ TGRC+C G G KC C
Sbjct: 1074 KECLP-----RDVRAGCRHSGGCLNGGL---------CDPHTGRCLCPAGWTGDKCQSPC 1119
Query: 125 LDP--NKKLGPN-GCMPGMEVKPCNGE---PPVINLQTGVELDCGSGANREDCPSDAYC 177
L + C PG G PP +G E C G+ EDC C
Sbjct: 1120 LRGWFGEACAQRCSCPPGAACHHVTGACRCPPGFT-GSGCEQACPPGSFGEDCAQMCQC 1177
Score = 119 (46.9 bits), Expect = 0.00020, P = 0.00020
Identities = 50/168 (29%), Positives = 61/168 (36%)
Query: 24 QGPD-NAGCP-STCG--CNKLGSTEDA-CIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSK 77
QG D CP T G C+ S A C T QC+C G G C+ C G WGL
Sbjct: 723 QGEDCGQECPVGTFGVNCSSSCSCGGAPCHGVTGQCRCPPGRTGEDCEADCPEGRWGL-- 780
Query: 78 ISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN-- 134
GC + C Q + C+ TG C+C PG GS+C + P GP+
Sbjct: 781 ---------GCQEICPACQHAA---RCDPETGACLCLPGFVGSRCQDVC-PAGWYGPSCQ 827
Query: 135 ---GCMPGMEVKPCNGEPPVINLQTGVELD--CGSGANREDCPSDAYC 177
C P G TG C +G DC C
Sbjct: 828 TRCSCANDGHCHPATGHCSCAPGWTGFSCQRACDTGHWGPDCSHPCNC 875
Score = 115 (45.5 bits), Expect = 0.00066, P = 0.00066
Identities = 30/94 (31%), Positives = 43/94 (45%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGCL 89
C TC + G T C+ + C C +G GL C+ C P +G K S++
Sbjct: 520 CSLTCDDCRNGGT---CLLGLDGCDCPEGWTGLICNETCPPDTFG--KNCSFS------- 567
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
C C G+ C+ +TG C C PGV G+ C +
Sbjct: 568 -CSCQNGGT----CDSVTGACRCPPGVSGTNCED 596
>RGD|1565947 [details] [associations]
symbol:Ntn4 "netrin 4" species:10116 "Rattus norvegicus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISO] [GO:0016322 "neuron remodeling"
evidence=ISO] [GO:0043237 "laminin-1 binding" evidence=ISO]
[GO:0060668 "regulation of branching involved in salivary gland
morphogenesis by extracellular matrix-epithelial cell signaling"
evidence=ISO] InterPro:IPR001134 PROSITE:PS50189 RGD:1565947
GO:GO:0016322 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 PROSITE:PS51117
GeneTree:ENSGT00700000104042 GO:GO:0060668 IPI:IPI00359984
Ensembl:ENSRNOT00000007412 ArrayExpress:F1M4Q9 Uniprot:F1M4Q9
Length = 436
Score = 139 (54.0 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 40/144 (27%), Positives = 52/144 (36%)
Query: 15 CCP--DNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ-----------CK-CKQGV 60
C P +++ G P+ C K D C D C C+
Sbjct: 113 CAPLYNDRPWEAADGRTGAPNECRTCKCNGHADTCHFDINVWEASGNRSGGVCNNCQHNT 172
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED------CEQMTGRCVCKP 114
G C RC+PG++ + APD C C C GS C+ G C CKP
Sbjct: 173 EGQHCQRCKPGFYRDLRRPFSAPD--ACKACSCHPVGSAILPFSSVTFCDPSNGDCPCKP 230
Query: 115 GVKGSKCNECLDPNKKLGPNGCMP 138
GV G C+ C+ G GC P
Sbjct: 231 GVAGPHCDRCMVGYWGFGDYGCRP 254
Score = 125 (49.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 37/116 (31%), Positives = 49/116 (42%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGS------TEDACIEDTEQCK 55
G + + C +Y D + PD C + C C+ +GS + C C
Sbjct: 174 GQHCQRCKPGFYR---DLRRPFSAPD--ACKA-CSCHPVGSAILPFSSVTFCDPSNGDCP 227
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV 111
CK GV G CDRC GYWG Y GC C C+ GS C+ +TG C+
Sbjct: 228 CKPGVAGPHCDRCMVGYWGFG---DY-----GCRPCDCA--GS----CDPLTGDCI 269
Score = 36 (17.7 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 107 TGRCVCKPGVKGS 119
+G+C CK V G+
Sbjct: 309 SGKCECKEQVLGN 321
>RGD|1582797 [details] [associations]
symbol:Megf11 "multiple EGF-like-domains 11" species:10116
"Rattus norvegicus" [GO:0010842 "retina layer formation"
evidence=ISO] [GO:0034109 "homotypic cell-cell adhesion"
evidence=ISO] InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00181 RGD:1582797 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS50027 Pfam:PF12661
GeneTree:ENSGT00690000101691 IPI:IPI00959176
Ensembl:ENSRNOT00000050649 Uniprot:F1M370
Length = 1094
Score = 144 (55.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 54/189 (28%), Positives = 70/189 (37%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
C + G + +G GC S C C+ + +C T C C+ G G C+
Sbjct: 333 CEPGYKGPSCQERLCPEGLHGPGCTSPCPCDTENTI--SCHPVTGACTCQPGWSGHYCNE 390
Query: 68 -CEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN-EC 124
C GY+G +GC L C C Q G+ DC +TG C C PG G C C
Sbjct: 391 SCPAGYYG-----------NGCQLPCTC-QNGA---DCHSITGSCTCAPGFMGEVCAVPC 435
Query: 125 LDPNKKLGPN-----GCMPGMEVKPCNGEPPVINLQTGVE--LDCGSGANREDCPSDAYC 177
GPN C G P +G G++ L C SG +C C
Sbjct: 436 AAGT--YGPNCSSVCSCSNGGTCSPVDGSCTCREGWQGLDCSLPCPSGTWGLNCNESCVC 493
Query: 178 HITQNFARC 186
N A C
Sbjct: 494 ---ANGAAC 499
Score = 131 (51.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 41/136 (30%), Positives = 56/136 (41%)
Query: 8 CLDSWYG--CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKC 65
C W G C G D C C C G++ C T +C C+ G G C
Sbjct: 682 CFPGWTGKDCSQGCPAAFFGKD---CGHICQCQN-GAS---CDHITGKCTCRTGFSGRHC 734
Query: 66 D-RCEPGYWGLSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
+ RC PG +G Y GC + C C + C+ +TG C C PG KG +C++
Sbjct: 735 EQRCAPGTFG------Y-----GCQQLCECMNNAT----CDHVTGTCYCSPGFKGIRCDQ 779
Query: 124 C------LDPNKKLGP 133
L+P K+ P
Sbjct: 780 AALMMDELNPYTKISP 795
Score = 130 (50.8 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 53/190 (27%), Positives = 67/190 (35%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
CL W G D+ T G C +C C GS C C+C G G C R
Sbjct: 551 CLAGWTGIRCDS-TCPPGRWGPNCSVSCSCENGGS----CSPVDGSCECAPGFRGPLCQR 605
Query: 68 -CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE-CL 125
C PG++G GC + C R C ++G C C PG G+ CN+ C
Sbjct: 606 ICPPGFYG-----------HGCAQ-PCPLCVHSRGPCHHVSGICECLPGFSGALCNQVCA 653
Query: 126 DPNKKLGPN-----GCMPGMEVKPCNGEPPVINLQTGVELDCGSGANR----EDCPSDAY 176
+ G + C P +G TG DC G +DC
Sbjct: 654 GGH--FGQDCAQLCSCANNGTCSPIDGSCQCFPGWTGK--DCSQGCPAAFFGKDCGHICQ 709
Query: 177 CHITQNFARC 186
C QN A C
Sbjct: 710 C---QNGASC 716
Score = 125 (49.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 48/152 (31%), Positives = 60/152 (39%)
Query: 47 CIEDTEQCKCKQGVGGLKC-DRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQ 105
C T QC C G G +C + C G +G + S +C C G C
Sbjct: 281 CDHVTGQCHCTAGYMGDRCQEECPFGTFGF-RCSQ---------RCDCHNGGQ----CSP 326
Query: 106 MTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPV-INLQTGVELDCGS 164
TG C C+PG KG C E L P GP GC PC+ E + + TG C
Sbjct: 327 ATGACECEPGYKGPSCQERLCPEGLHGP-GCTSPC---PCDTENTISCHPVTGA-CTCQP 381
Query: 165 GAN----REDCPSDAY---CHIT---QNFARC 186
G + E CP+ Y C + QN A C
Sbjct: 382 GWSGHYCNESCPAGYYGNGCQLPCTCQNGADC 413
Score = 121 (47.7 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 52/167 (31%), Positives = 64/167 (38%)
Query: 33 STCGCNKLGSTEDACIE-DTEQCKCKQGVGGLKCDRCEPGYWGLSKISS------YAPDI 85
S C C D CI TE+C + V C CEPG WG SS + P
Sbjct: 84 SQC-CPGYYENGDFCIPLCTEECMHGRCVSPDTC-HCEPG-WGGPDCSSGCDSEHWGPHC 140
Query: 86 DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE-CLDPNKKLGPN---GCMPGME 141
+C C Q G++ C +TG CVC PG +G +C E C G C G
Sbjct: 141 SN--RCQC-QNGAL---CNPITGACVCAPGFRGWRCEEFCAPGTHGKGCQLLCQCHHGAS 194
Query: 142 VKPCNGEPPVINLQTGVELD--CGSGANREDCPSDAYCHITQNFARC 186
P GE TGV + C G++ C C QN C
Sbjct: 195 CDPRTGECLCAPGYTGVYCEELCPPGSHGAHCELRCPC---QNGGTC 238
Score = 121 (47.7 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 51/182 (28%), Positives = 61/182 (33%)
Query: 8 CLDSWYG--CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKC 65
C W G C + GP C + C C G+ C T C C G G +C
Sbjct: 118 CEPGWGGPDCSSGCDSEHWGPH---CSNRCQCQN-GAL---CNPITGACVCAPGFRGWRC 170
Query: 66 DR-CEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
+ C PG G GC L C C S C+ TG C+C PG G C E
Sbjct: 171 EEFCAPGTHG-----------KGCQLLCQCHHGAS----CDPRTGECLCAPGYTGVYCEE 215
Query: 124 CLDPNKKLGPN-----GCMPGMEVKPCNGEPPVINLQTGVEL--DCGSGANREDCPSDAY 176
P G + C G GE TG C G ++C D
Sbjct: 216 LCPPGSH-GAHCELRCPCQNGGTCHHITGECACPPGWTGAVCAQPCPPGTFGQNCSQDCP 274
Query: 177 CH 178
CH
Sbjct: 275 CH 276
>UNIPROTKB|Q9HB63 [details] [associations]
symbol:NTN4 "Netrin-4" species:9606 "Homo sapiens"
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0043237
"laminin-1 binding" evidence=IEA] [GO:0060668 "regulation of
branching involved in salivary gland morphogenesis by extracellular
matrix-epithelial cell signaling" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005886
Reactome:REACT_111045 GO:GO:0007411 GO:GO:0016322 EMBL:CH471054
PROSITE:PS00022 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
EMBL:AF278532 EMBL:AF297711 EMBL:AF119916 EMBL:AY330211
EMBL:AL137540 EMBL:BC013591 EMBL:BC136798 EMBL:BC136799
EMBL:AL833767 EMBL:AK024691 IPI:IPI00328091 IPI:IPI00385236
IPI:IPI00472613 PIR:T46383 RefSeq:NP_067052.2 UniGene:Hs.201034
ProteinModelPortal:Q9HB63 SMR:Q9HB63 DIP:DIP-46274N IntAct:Q9HB63
MINT:MINT-1463888 STRING:Q9HB63 PhosphoSite:Q9HB63 DMDM:76789662
PaxDb:Q9HB63 PRIDE:Q9HB63 Ensembl:ENST00000343702
Ensembl:ENST00000344911 Ensembl:ENST00000538383
Ensembl:ENST00000553059 GeneID:59277 KEGG:hsa:59277 UCSC:uc001tei.3
UCSC:uc009ztf.3 CTD:59277 GeneCards:GC12M095984 HGNC:HGNC:13658
HPA:HPA049832 MIM:610401 neXtProt:NX_Q9HB63 PharmGKB:PA31815
eggNOG:NOG329215 HOVERGEN:HBG082019 InParanoid:Q9HB63 KO:K06845
OMA:RSQDFGK PhylomeDB:Q9HB63 ChiTaRS:NTN4 GenomeRNAi:59277
NextBio:65162 ArrayExpress:Q9HB63 Bgee:Q9HB63 CleanEx:HS_NTN4
Genevestigator:Q9HB63 GermOnline:ENSG00000074527 GO:GO:0060668
Uniprot:Q9HB63
Length = 628
Score = 141 (54.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 40/144 (27%), Positives = 53/144 (36%)
Query: 15 CCP--DNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ-----------CK-CKQGV 60
C P +++ G P+ C K D C D C C+
Sbjct: 307 CAPLYNDRPWEAADGKTGAPNECRTCKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNT 366
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED------CEQMTGRCVCKP 114
G C RC+PG++ + APD C C C GS C+ G C CKP
Sbjct: 367 EGQYCQRCKPGFYRDLRRPFSAPD--ACKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKP 424
Query: 115 GVKGSKCNECLDPNKKLGPNGCMP 138
GV G +C+ C+ G GC P
Sbjct: 425 GVAGRRCDRCMVGYWGFGDYGCRP 448
Score = 132 (51.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 38/116 (32%), Positives = 49/116 (42%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGS------TEDACIEDTEQCK 55
G Y + C +Y D + PD C C C+ +GS + C C
Sbjct: 368 GQYCQRCKPGFYR---DLRRPFSAPD--AC-KPCSCHPVGSAVLPANSVTFCDPSNGDCP 421
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV 111
CK GV G +CDRC GYWG Y GC C C+ GS C+ +TG C+
Sbjct: 422 CKPGVAGRRCDRCMVGYWGFG---DY-----GCRPCDCA--GS----CDPITGDCI 463
>WB|WBGene00013416 [details] [associations]
symbol:Y64G10A.7 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011489 InterPro:IPR018097
Pfam:PF00008 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
InterPro:IPR009030 SUPFAM:SSF57184 InterPro:IPR026823 Pfam:PF12662
Pfam:PF12661 GeneTree:ENSGT00690000101691 EMBL:AL110498
EMBL:AL117206 GeneID:178377 KEGG:cel:CELE_Y64G10A.7 CTD:178377
RefSeq:NP_001255802.1 ProteinModelPortal:G5EFX3 SMR:G5EFX3
EnsemblMetazoa:Y64G10A.7b WormBase:Y64G10A.7b OMA:RIEMEVI
Uniprot:G5EFX3
Length = 1714
Score = 146 (56.5 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 58/191 (30%), Positives = 75/191 (39%)
Query: 8 CLDSWYGC-CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCD 66
C +YG C + + G AGC C C G D D + KC G G CD
Sbjct: 803 CKPGYYGHHC--KRMCSPGLFGAGCAMKCSC-PAGIRCDPVTGDCTK-KCPAGYQGNLCD 858
Query: 67 R-CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED--CEQMTGRCVCKPGVKGSKCNE 123
+ C GY+G Y D + KC C+ S + C +TG C C PG G C++
Sbjct: 859 QPCPAGYFG------Y--DCEQ--KCSCADVASPHKSKVCHHVTGTCTCLPGKTGPLCDQ 908
Query: 124 CLDPNKKLGPN-----GCMPGMEVKPCNGE---PPVINLQTGVELDCGSGANREDCPSDA 175
PN GPN C+ G + +G P T E+ C +G DC
Sbjct: 909 SCAPNT-YGPNCAHTCSCVNGAKCDESDGSCHCTPGFYGATCSEV-CPTGRFGIDCMQLC 966
Query: 176 YCHITQNFARC 186
C QN A C
Sbjct: 967 KC---QNGAIC 974
Score = 138 (53.6 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 60/198 (30%), Positives = 77/198 (38%)
Query: 8 CLDSWYG--C---CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGG 62
C W G C CPD G GC + C C +T D + + +C G
Sbjct: 1069 CRPGWRGKKCDRPCPD------GRFGEGCNAICDCT---TTNDTSMYNPFVARCDHVTG- 1118
Query: 63 LKCDRCEPGYWGLSKISS--YAPDIDGCL-KCGCSQFGSVREDCEQMTGRCVCKPGVKGS 119
+C RC G+ G +S +GC C CS S C+++TG C C G G
Sbjct: 1119 -EC-RCPAGWTGPDCQTSCPLGRHGEGCRHSCQCSNGAS----CDRVTGFCDCPSGFMGK 1172
Query: 120 KC-NECLDPNKKLGPNG-----CMPGMEVKPCNGEPPVINLQTG--VELDCGSGANREDC 171
C +EC P G N CM G E NG+ I+ TG E C G +C
Sbjct: 1173 NCESEC--PEGLWGSNCMKHCLCMHGGECNKENGDCECIDGWTGPSCEFLCPFGQFGRNC 1230
Query: 172 PSDAYCHITQNFARCCRK 189
C +N A C RK
Sbjct: 1231 AQRCNC---KNGASCDRK 1245
Score = 135 (52.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 51/167 (30%), Positives = 68/167 (40%)
Query: 25 GPDNAGCPSTC--G-----CNKLGSTEDA--CIEDTEQCKCKQGVGGLKCD-RCEPGYWG 74
G + C S C G CN+L S E+ C T C C G G KC+ C+ +G
Sbjct: 1383 GHSGSDCKSGCVQGRFGPDCNQLCSCENGGVCDSSTGSCVCPPGYIGTKCEIACQSDRFG 1442
Query: 75 LSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGP 133
P C K C C G+ C+++TG+C C PG G CN+ P + G
Sbjct: 1443 --------PT---CEKICNCENGGT----CDRLTGQCRCLPGFTGMTCNQVC-PEGRFGA 1486
Query: 134 NGCMPGMEVKPCNGEPPVINLQTGVELDCGSGAN----REDCPSDAY 176
GC + + NG N +G E C G + CPS Y
Sbjct: 1487 -GCKE--KCRCANGH---CNASSG-ECKCNLGFTGPSCEQSCPSGKY 1526
Score = 133 (51.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 50/165 (30%), Positives = 66/165 (40%)
Query: 19 NKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSK 77
++T G AGC C C G+T C T C+C+ G G KCDR C G +G
Sbjct: 1036 DETCDSGLFGAGCKGICSCQN-GAT---CDSVTGSCECRPGWRGKKCDRPCPDGRFG--- 1088
Query: 78 ISSYAPDIDGCLK-CGC------SQFGSVREDCEQMTGRCVCKPGVKGSKCN-ECLDPNK 129
+GC C C S + C+ +TG C C G G C C P
Sbjct: 1089 --------EGCNAICDCTTTNDTSMYNPFVARCDHVTGECRCPAGWTGPDCQTSC--PLG 1138
Query: 130 KLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSD 174
+ G GC + NG + TG DC SG ++C S+
Sbjct: 1139 RHG-EGCRHSCQCS--NGAS--CDRVTGF-CDCPSGFMGKNCESE 1177
Score = 130 (50.8 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 47/153 (30%), Positives = 59/153 (38%)
Query: 37 CNKLGSTEDACIEDTEQ--CKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGCLKCGC 93
C +L ++ I DT C+C G G KCD+ C PG +G D KC C
Sbjct: 962 CMQLCKCQNGAICDTSNGSCECAPGWSGKKCDKACAPGTFGK----------DCSKKCDC 1011
Query: 94 SQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNK-KLGPNG---CMPGMEVKPCNGEP 149
+ G C+ G C+C PG KG KC+E D G G C G G
Sbjct: 1012 AD-GM---HCDPSDGECICPPGKKGHKCDETCDSGLFGAGCKGICSCQNGATCDSVTGSC 1067
Query: 150 PVINLQTGVELD--CGSGANREDCPSDAYCHIT 180
G + D C G E C +A C T
Sbjct: 1068 ECRPGWRGKKCDRPCPDGRFGEGC--NAICDCT 1098
>UNIPROTKB|F1MET4 [details] [associations]
symbol:MEGF10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0055001 "muscle cell development" evidence=IEA]
[GO:0051147 "regulation of muscle cell differentiation"
evidence=IEA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=IEA] [GO:0043654 "recognition of apoptotic
cell" evidence=IEA] [GO:0034109 "homotypic cell-cell adhesion"
evidence=IEA] [GO:0014841 "satellite cell proliferation"
evidence=IEA] [GO:0014816 "satellite cell differentiation"
evidence=IEA] [GO:0014719 "satellite cell activation" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS50027 GO:GO:0055001 GO:GO:0034109 GO:GO:0014816
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0043654
GO:GO:0051147 OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841
EMBL:DAAA02019789 EMBL:DAAA02019790 EMBL:DAAA02019791
EMBL:DAAA02019792 IPI:IPI00742600 UniGene:Bt.64852
Ensembl:ENSBTAT00000000434 NextBio:20877803 ArrayExpress:F1MET4
Uniprot:F1MET4
Length = 1136
Score = 144 (55.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 42/128 (32%), Positives = 55/128 (42%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
CL W G D+ A+G C C C K G++ C D C+C G G C R
Sbjct: 559 CLPGWSGVHCDS-VCAEGRWGPNCSLPCYC-KNGAS---CSPDDGICECAPGFRGTTCQR 613
Query: 68 -CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
C PG++G + S P C+ G C +TG C C PG G+ CNE
Sbjct: 614 ICSPGFYG-HRCSQTCPQ---CVHSS----GP----CHHITGLCDCLPGFTGALCNEVC- 660
Query: 127 PNKKLGPN 134
P+ + G N
Sbjct: 661 PSGRFGKN 668
Score = 137 (53.3 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 32/94 (34%), Positives = 49/94 (52%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGCL 89
C C C+ + +T +C + +C CK G GL C+ C PG++G + C
Sbjct: 364 CDKRCPCH-VDNTL-SCHPMSGECACKPGWSGLYCNETCSPGFYG-----------EACQ 410
Query: 90 K-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN 122
+ C C Q G+ DC+ +TG+C+C PG KG C+
Sbjct: 411 QICSC-QNGA---DCDSVTGKCICAPGFKGIDCS 440
Score = 127 (49.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 57/195 (29%), Positives = 72/195 (36%)
Query: 7 SCLDSWYGC-CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKC 65
+C W G C N+T + G C C C G+ C T +C C G G+ C
Sbjct: 386 ACKPGWSGLYC--NETCSPGFYGEACQQICSCQN-GAD---CDSVTGKCICAPGFKGIDC 439
Query: 66 D-RCEPGYWGL--SKISSYAPD-----IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVK 117
C G +G+ S + S D +DG C G DC C G
Sbjct: 440 SIPCPLGTYGINCSSLCSCKNDAVCSPVDGSCTCNAGWHGV---DCS-----ISCPSGTW 491
Query: 118 GSKCN---ECLDP---NKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
G CN +CL+ N G C PG + C E P + G L+C A R DC
Sbjct: 492 GFGCNLTCQCLNGGACNTLDGTCTCAPGWRGEKC--EFPCQDGTYG--LNC---AERCDC 544
Query: 172 PSDAYCHITQNFARC 186
CH T RC
Sbjct: 545 SHADGCHSTTGHCRC 559
Score = 125 (49.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 53/193 (27%), Positives = 71/193 (36%)
Query: 8 CLDSW-YGCC--PDNKTLAQGPDNAGCPSTCG-------CNKLGSTEDA--CIEDTEQCK 55
C D +G C P+ G C S C C+ ++ C T C
Sbjct: 109 CADKCVHGRCIAPNTCQCEPGWGGTNCSSACDGDHWGPHCSSRCQCKNGALCNPITGACH 168
Query: 56 CKQGVGGLKCD-RCEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCK 113
C G G +C+ RCE G +G + C +C C Q G+ C+ +TG C C
Sbjct: 169 CAAGFRGWRCEERCEQGTYG-----------NDCHQRCQC-QNGAT---CDHVTGECRCP 213
Query: 114 PGVKGSKCNECLDPNKKLGPN-----GCMPGMEVKPCNGE---PPVINLQTGVELDCGSG 165
PG G+ C + P K GP C G GE PP L T C G
Sbjct: 214 PGYTGAFCEDLCPPGKH-GPQCEQRCPCQNGGVCHHVTGECSCPPGW-LGTVCGQPCPEG 271
Query: 166 ANREDCPSDAYCH 178
++C + CH
Sbjct: 272 RFGKNCSQECQCH 284
Score = 118 (46.6 bits), Expect = 0.00020, P = 0.00020
Identities = 50/169 (29%), Positives = 61/169 (36%)
Query: 31 CP-STCG--CNKLGSTE-DA-CIEDTEQCKCKQGVGGLKCD-RCEPGYWGLSKISSYAPD 84
CP T G C+ L S + DA C C C G G+ C C G WG
Sbjct: 443 CPLGTYGINCSSLCSCKNDAVCSPVDGSCTCNAGWHGVDCSISCPSGTWGF--------- 493
Query: 85 IDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN-ECLDPNKKLGPNGCMPGMEV 142
GC L C C G+ C + G C C PG +G KC C D L
Sbjct: 494 --GCNLTCQCLNGGA----CNTLDGTCTCAPGWRGEKCEFPCQDGTYGLNCAERCDCSHA 547
Query: 143 KPCN---GEPPVINLQTGVELD--CGSGANREDCPSDAYCHITQNFARC 186
C+ G + +GV D C G +C YC +N A C
Sbjct: 548 DGCHSTTGHCRCLPGWSGVHCDSVCAEGRWGPNCSLPCYC---KNGASC 593
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 31/100 (31%), Positives = 40/100 (40%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR--CEPGYWGLSKISSYAPDIDGC 88
C TC C G C + C C+ G G +C+ C G +G+ C
Sbjct: 320 CAETCQCINGGK----CYHVSGSCLCEAGFSGDRCEARLCPEGLYGIR-----------C 364
Query: 89 LK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDP 127
K C C ++ C M+G C CKPG G CNE P
Sbjct: 365 DKRCPCHVDNTL--SCHPMSGECACKPGWSGLYCNETCSP 402
>UNIPROTKB|Q96KG7 [details] [associations]
symbol:MEGF10 "Multiple epidermal growth factor-like
domains protein 10" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043654 "recognition of apoptotic cell"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
[GO:0016323 "basolateral plasma membrane" evidence=IEA] [GO:0048641
"regulation of skeletal muscle tissue development" evidence=IMP]
[GO:0014719 "satellite cell activation" evidence=ISS] [GO:0014841
"satellite cell proliferation" evidence=ISS] [GO:0034109 "homotypic
cell-cell adhesion" evidence=IDA] [GO:0051147 "regulation of muscle
cell differentiation" evidence=IMP] [GO:0014816 "satellite cell
differentiation" evidence=IMP] [GO:0055001 "muscle cell
development" evidence=IMP] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 GO:GO:0016021
EMBL:CH471062 GO:GO:0016323 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042995 GO:GO:0001891 GO:GO:0048641 PROSITE:PS01186
eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 HOGENOM:HOG000294130
Pfam:PF12661 GO:GO:0043654 HSSP:P01132 GO:GO:0051147 EMBL:AB058676
EMBL:CR749437 EMBL:BC020198 EMBL:BC152478 IPI:IPI00064607
IPI:IPI00873983 RefSeq:NP_001243474.1 RefSeq:NP_115822.1
UniGene:Hs.438709 ProteinModelPortal:Q96KG7 SMR:Q96KG7
IntAct:Q96KG7 STRING:Q96KG7 PhosphoSite:Q96KG7 DMDM:74716908
PaxDb:Q96KG7 PRIDE:Q96KG7 Ensembl:ENST00000274473
Ensembl:ENST00000418761 Ensembl:ENST00000503335
Ensembl:ENST00000508365 GeneID:84466 KEGG:hsa:84466 UCSC:uc003kuh.4
UCSC:uc010jdc.1 CTD:84466 GeneCards:GC05P126654 HGNC:HGNC:29634
HPA:HPA026876 MIM:612453 MIM:614399 neXtProt:NX_Q96KG7
Orphanet:98920 PharmGKB:PA144596410 HOVERGEN:HBG108333
InParanoid:Q96KG7 OMA:FGCNLTC PhylomeDB:Q96KG7 GenomeRNAi:84466
NextBio:74274 Bgee:Q96KG7 CleanEx:HS_MEGF10 Genevestigator:Q96KG7
GO:GO:0014719 GO:GO:0014841 Uniprot:Q96KG7
Length = 1140
Score = 144 (55.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 42/128 (32%), Positives = 55/128 (42%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
CL W G D+ A+G C C C K G++ C D C+C G G C R
Sbjct: 559 CLPGWSGVHCDS-VCAEGRWGPNCSLPCYC-KNGAS---CSPDDGICECAPGFRGTTCQR 613
Query: 68 -CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
C PG++G + S P C+ G C +TG C C PG G+ CNE
Sbjct: 614 ICSPGFYG-HRCSQTCPQ---CVHSS----GP----CHHITGLCDCLPGFTGALCNEVC- 660
Query: 127 PNKKLGPN 134
P+ + G N
Sbjct: 661 PSGRFGKN 668
Score = 141 (54.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 48/157 (30%), Positives = 66/157 (42%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGCL 89
C C C+ L +T +C + +C CK G GL C+ C PG++G + C
Sbjct: 364 CDKRCPCH-LENTH-SCHPMSGECACKPGWSGLYCNETCSPGFYG-----------EACQ 410
Query: 90 K-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE-CLDPNKKLGPN-----GCMPGMEV 142
+ C C Q G+ DC+ +TG+C C PG KG C+ C P G N GC
Sbjct: 411 QICSC-QNGA---DCDSVTGKCTCAPGFKGIDCSTPC--PLGTYGINCSSRCGCKNDAVC 464
Query: 143 KPCNGEPPVINLQTGVE--LDCGSGANREDCPSDAYC 177
P +G GV+ + C SG C C
Sbjct: 465 SPVDGSCTCKAGWHGVDCSIRCPSGTWGFGCNLTCQC 501
Score = 140 (54.3 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 57/186 (30%), Positives = 67/186 (36%)
Query: 15 CCPDNKTLAQGPD-NAGCP-STCGCN---KLGSTEDA-CIEDTEQCKCKQGVGGLKCD-R 67
C P K G D + CP T G N + G DA C C CK G G+ C R
Sbjct: 430 CAPGFK----GIDCSTPCPLGTYGINCSSRCGCKNDAVCSPVDGSCTCKAGWHGVDCSIR 485
Query: 68 CEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN-ECL 125
C G WG GC L C C G+ C + G C C PG +G KC C
Sbjct: 486 CPSGTWGF-----------GCNLTCQCLNGGA----CNTLDGTCTCAPGWRGEKCELPCQ 530
Query: 126 DPNKKLGPN---GCMPGMEVKPCNGEPPVINLQTGVELD--CGSGANREDCPSDAYCHIT 180
D L C P G + +GV D C G +C YC
Sbjct: 531 DGTYGLNCAERCDCSHADGCHPTTGHCRCLPGWSGVHCDSVCAEGRWGPNCSLPCYC--- 587
Query: 181 QNFARC 186
+N A C
Sbjct: 588 KNGASC 593
Score = 139 (54.0 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 55/182 (30%), Positives = 71/182 (39%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAG--CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKC 65
C W G N + A D+ G C S C C K G+ C T C C G G +C
Sbjct: 126 CEPGWGGT---NCSSACDGDHWGPHCTSRCQC-KNGAL---CNPITGACHCAAGFRGWRC 178
Query: 66 -DRCEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
DRCE G +G + C +C C Q G+ C+ +TG C C PG G+ C +
Sbjct: 179 EDRCEQGTYG-----------NDCHQRCQC-QNGAT---CDHVTGECRCPPGYTGAFCED 223
Query: 124 CLDPNKKLGPN-----GCMPGMEVKPCNGEP--PVINLQTGVELDCGSGANREDCPSDAY 176
P K GP C G GE P + T C G ++C +
Sbjct: 224 LCPPGKH-GPQCEQRCPCQNGGVCHHVTGECSCPSGWMGTVCGQPCPEGRFGKNCSQECQ 282
Query: 177 CH 178
CH
Sbjct: 283 CH 284
Score = 125 (49.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 55/195 (28%), Positives = 71/195 (36%)
Query: 7 SCLDSWYGC-CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKC 65
+C W G C N+T + G C C C G+ C T +C C G G+ C
Sbjct: 386 ACKPGWSGLYC--NETCSPGFYGEACQQICSCQN-GAD---CDSVTGKCTCAPGFKGIDC 439
Query: 66 DR-CEPGYWGLS-------KISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVK 117
C G +G++ K + +DG C G DC C G
Sbjct: 440 STPCPLGTYGINCSSRCGCKNDAVCSPVDGSCTCKAGWHGV---DCSIR-----CPSGTW 491
Query: 118 GSKCN---ECLDP---NKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
G CN +CL+ N G C PG + C E P + G L+C A R DC
Sbjct: 492 GFGCNLTCQCLNGGACNTLDGTCTCAPGWRGEKC--ELPCQDGTYG--LNC---AERCDC 544
Query: 172 PSDAYCHITQNFARC 186
CH T RC
Sbjct: 545 SHADGCHPTTGHCRC 559
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 31/100 (31%), Positives = 39/100 (39%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR--CEPGYWGLSKISSYAPDIDGC 88
C TC C G C + C C+ G G +C+ C G +G+ C
Sbjct: 320 CAETCQCVNGGK----CYHVSGACLCEAGFAGERCEARLCPEGLYGIK-----------C 364
Query: 89 LK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDP 127
K C C + C M+G C CKPG G CNE P
Sbjct: 365 DKRCPCHLENT--HSCHPMSGECACKPGWSGLYCNETCSP 402
>UNIPROTKB|Q90923 [details] [associations]
symbol:NTN3 "Netrin-3" species:9031 "Gallus gallus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0007520 "myoblast fusion"
evidence=IDA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0006355 GO:GO:0005578 PROSITE:PS00022 GO:GO:0007520
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 EMBL:L34550 IPI:IPI00581364 PIR:B54665
UniGene:Gga.792 ProteinModelPortal:Q90923 STRING:Q90923
InParanoid:Q90923 OrthoDB:EOG4VHK67 Uniprot:Q90923
Length = 581
Score = 140 (54.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 31/109 (28%), Positives = 46/109 (42%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPG 115
C+ G C C+ G++ +S D C C C G+ + C Q TG+C CK G
Sbjct: 348 CRHNTAGRHCHYCKEGFY--RDLSKSITDRKACKACDCHPVGAAGKTCNQTTGQCPCKDG 405
Query: 116 VKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGS 164
V G CN C ++ + P +++ N P + T DC S
Sbjct: 406 VTGLTCNRCAKGFQQ-SRSPVAPCIKIPAIN--PTSLVTSTEAPADCDS 451
Score = 121 (47.7 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 40/154 (25%), Positives = 61/154 (39%)
Query: 35 CGCNKLGSTEDACIEDTEQ---CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKC 91
C CN S C++D EQ C CK G +CDRC+P ++ + A + + CL C
Sbjct: 262 CKCNGHASR---CVKDKEQKLVCDCKHNTEGPECDRCKPFHYDRPWQRASAREANECLAC 318
Query: 92 GCSQFGS-VREDCE--QMTGR-----CV-CKPGVKGSKCNECL-----DPNKKLGPNGCM 137
C+ R + E +++GR C+ C+ G C+ C D +K +
Sbjct: 319 NCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKSITDRKAC 378
Query: 138 PGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
+ P N TG + C G C
Sbjct: 379 KACDCHPVGAAGKTCNQTTG-QCPCKDGVTGLTC 411
Score = 113 (44.8 bits), Expect = 0.00035, P = 0.00035
Identities = 33/98 (33%), Positives = 43/98 (43%)
Query: 27 DNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
D C + C C+ +G+ C + T QC CK GV GL C+RC G+ S+ S AP
Sbjct: 374 DRKACKA-CDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAKGFQQ-SR-SPVAP--- 427
Query: 87 GCLKCGCSQFGSVREDCEQMTGRC--VCKPGVKGSKCN 122
C+K S+ E C CKP K N
Sbjct: 428 -CIKIPAINPTSLVTSTEAPAD-CDSYCKPAKGNYKIN 463
>RGD|1565197 [details] [associations]
symbol:Ntn5 "netrin 5" species:10116 "Rattus norvegicus"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 RGD:1565197 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 OrthoDB:EOG402WS1
IPI:IPI00367517 Ensembl:ENSRNOT00000028524 UCSC:RGD:1565197
Uniprot:D3ZT86
Length = 448
Score = 138 (53.6 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 41/153 (26%), Positives = 59/153 (38%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGY--WGLSKISSYAPDIDG 87
G C C+ + A +C+C+ G C+ C P + W + P
Sbjct: 168 GVRGRCQCHG-HAARCAARAQPPRCRCRHHTTGPGCESCRPSHRDWPWRPATPQHPH--P 224
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNG 147
CL C C G+ C Q +G+C CK GV G CN C P + + P M PC
Sbjct: 225 CLPCQCHPIGATGGMCNQTSGQCSCKLGVTGLTCNHC-GPGYQQSRS---PRM---PCQR 277
Query: 148 EPPVINLQTGVELDCGSGANREDCPSDAYCHIT 180
P + L A+R D YC+++
Sbjct: 278 IP-----EATTALATTPVASRSDPQCQGYCNVS 305
>UNIPROTKB|F1P0Z5 [details] [associations]
symbol:Gga.39688 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001558 "regulation of cell growth"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005520 "insulin-like growth factor binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR000742
InterPro:IPR000867 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51323
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
GO:GO:0001558 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS00010 InterPro:IPR026823 Pfam:PF12662 Pfam:PF12661
GeneTree:ENSGT00690000101691 OMA:QGAACDP EMBL:AADN02040897
EMBL:AADN02040898 EMBL:AADN02040899 EMBL:AADN02040900
EMBL:AADN02040901 IPI:IPI00584500 ProteinModelPortal:F1P0Z5
Ensembl:ENSGALT00000001544 Uniprot:F1P0Z5
Length = 1296
Score = 137 (53.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 39/124 (31%), Positives = 57/124 (45%)
Query: 7 SCLDSWYGC-CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKC 65
SC W G C + A G GC + C C+ S+ +C T QC C G G +C
Sbjct: 682 SCAPGWTGHDC--RRGCAVGRWGPGCANVCECS---SSTGSCDAVTGQCACDAGYTGSRC 736
Query: 66 D-RCEPGYWGLSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
+ RC G++GL GC + C C + G++ C+ ++G C C G +G+ C
Sbjct: 737 EERCPAGWFGL-----------GCRRRCQC-EHGAM---CDHVSGACTCAEGWRGTFCEH 781
Query: 124 -CLD 126
C D
Sbjct: 782 PCPD 785
Score = 130 (50.8 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 58/203 (28%), Positives = 74/203 (36%)
Query: 8 CLDSWYGC-CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKC- 65
C W G C N+T G C C C G+ E A T C+C GV G+ C
Sbjct: 382 CPAGWSGLLC--NQTCPPGTFGKNCSQLCLCQNGGTCEPA----TGTCRCPPGVAGIHCE 435
Query: 66 DRCEPGYWGLSKISSYAPDIDGCLK-CGCSQFGSVRED-----CEQ-MTGR-C--VCKPG 115
D C G++G C K C C+ G C+ + GR C C
Sbjct: 436 DGCPKGFFGKQ-----------CRKKCNCANRGRCHRIYGACLCDPGLYGRYCHLACPKW 484
Query: 116 VKGSKCNE---CLDPN-----KKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGAN 167
G C+E C+ PN K+ G C PG C + G + C
Sbjct: 485 AFGPGCSEECLCVQPNTQHCDKRDGSCSCKPGYSGVHCETKCEAGRYGEGCKKKCS---- 540
Query: 168 REDCPSDAYC-HITQNFARCCRK 189
CP DA C HIT RC ++
Sbjct: 541 ---CPPDARCDHIT---GRCWKE 557
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 62/215 (28%), Positives = 88/215 (40%)
Query: 6 KSCLDSWYGCCPDNKTLAQGPDNAG-C-PST--CGCNKLGST----EDACIEDT-----E 52
++C + +YG L Q N G C P+T C C +G T E AC E +
Sbjct: 867 QACPEGFYGTGCHQHCLCQ---NGGTCDPTTGHCIC-PMGWTGLACELACAEGHGDGCGQ 922
Query: 53 QCKCKQGVGGLKCD-----RCEPGYWGLSKISSYAPDIDG--CL-KCGCSQFGSVREDCE 104
+C C G G+ CD +C PG+ G S S P G C +C C G+ C+
Sbjct: 923 RCACLNG--GV-CDPQGQCQCPPGWSGSSCESPCLPGAFGKSCAERCACPP-GA---PCD 975
Query: 105 QMTGRCVCKPGVKGSKCNECLDPN---KKLGPN-GCM-PGMEVKPCNGEPPVINLQTG-- 157
+TG+C C PG G+ C P ++ C+ P + P +G + G
Sbjct: 976 HITGQCSCPPGFTGAACETPCPPGTFGERCAQRCRCVGPTQDCHPISGVCVCAPGRHGPD 1035
Query: 158 VELDC-----GSGANRE-DCPSDAYCHITQNFARC 186
EL+C G G R +C + A C T C
Sbjct: 1036 CELECPVGWYGPGCERPCECKNGARCERTTGTCHC 1070
Score = 120 (47.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 50/161 (31%), Positives = 60/161 (37%)
Query: 20 KTLAQGPDNAGCPSTC-------GCNKLGSTEDA-CIEDTEQCKCKQGVGGLKCDR-CEP 70
K QG C C GC L S A C + +C C G G C + C
Sbjct: 556 KECPQGYHGENCDQECPAGRFGAGCLLLCSCGGAPCDAVSRRCVCAPGWTGHDCAQACPE 615
Query: 71 GYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKK 130
G WGL P+ C+ GS C+ TG CVC PG GS+C + P
Sbjct: 616 GRWGLG-CQELCPE--------CANNGS----CDPATGACVCPPGFTGSRCQDVCPPGW- 661
Query: 131 LGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
G + C G E C+ PV TG C G DC
Sbjct: 662 FGQS-CSCGNEGH-CH---PV----TGT-CSCAPGWTGHDC 692
Score = 116 (45.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 41/125 (32%), Positives = 49/125 (39%)
Query: 7 SCLDSWYGC-CPDNKTLAQGPDNAGCP-----STCGCNKLGSTEDACIEDTEQCKCKQGV 60
SC + C CP T ++ D CP +C C G C T C C G
Sbjct: 634 SCDPATGACVCPPGFTGSRCQDV--CPPGWFGQSCSCGNEGH----CHPVTGTCSCAPGW 687
Query: 61 GGLKCDR-CEPGYWGLSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKG 118
G C R C G WG P GC C CS S C+ +TG+C C G G
Sbjct: 688 TGHDCRRGCAVGRWG--------P---GCANVCECS---SSTGSCDAVTGQCACDAGYTG 733
Query: 119 SKCNE 123
S+C E
Sbjct: 734 SRCEE 738
Score = 113 (44.8 bits), Expect = 0.00094, P = 0.00094
Identities = 36/131 (27%), Positives = 58/131 (44%)
Query: 1 SGIYLKSCL-DSWYGCCPDNKTLAQGPDNAGCP-----STCGCNKLGSTEDACIEDTEQC 54
+ I + +CL + +G ++ L G GCP + C + + AC T C
Sbjct: 1179 ANICVGNCLTEEMWGFRGNSSVLLSGCSLPGCPPGFHGTDCQQHCDCAHGAACDPATGHC 1238
Query: 55 KCKQGVGGLKCDR--CEPGYWGLSKISSYAPDIDGCL-KCGCSQFGSVREDCEQMTGRCV 111
C G+ G +C CE G +G +GC +C C G+ C+++TG C+
Sbjct: 1239 HCPVGLRGHRCQEAGCEEGTYG-----------EGCRQRCDC--VGNA--PCDRITGHCL 1283
Query: 112 CKPGVKGSKCN 122
C PG G +C+
Sbjct: 1284 CPPGKTGPRCD 1294
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 17/69 (24%), Positives = 20/69 (28%)
Query: 112 CKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGE---PPVINLQTGVELDCGSGANR 168
C PG G+ C + D C G P G P + E C G
Sbjct: 1210 CPPGFHGTDCQQHCD---------CAHGAACDPATGHCHCPVGLRGHRCQEAGCEEGTYG 1260
Query: 169 EDCPSDAYC 177
E C C
Sbjct: 1261 EGCRQRCDC 1269
Score = 36 (17.7 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 161 DCGSGANREDCPSDAYCH 178
DC GA + P+ +CH
Sbjct: 1224 DCAHGAACD--PATGHCH 1239
>UNIPROTKB|F1MAS4 [details] [associations]
symbol:F1MAS4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0007218
"neuropeptide signaling pathway" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205
PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50221
PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008
SMART:SM00112 SMART:SM00179 SMART:SM00181 SMART:SM00303
InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886 GO:GO:0001764
GO:GO:0009952 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
GO:GO:0007626 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0042472 GO:GO:0001942 PROSITE:PS01186
GO:GO:0007266 GO:GO:0001843 GO:GO:0042060 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0032956 GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624
Pfam:PF12003 Gene3D:2.60.40.60 GeneTree:ENSGT00700000104170
GO:GO:0045176 Pfam:PF02210 GO:GO:0048105 GO:GO:0042249
GO:GO:0060490 GO:GO:0060488 GO:GO:0090179 GO:GO:0060489
GO:GO:0090251 IPI:IPI00361486 ProteinModelPortal:F1MAS4
Ensembl:ENSRNOT00000036025 Uniprot:F1MAS4
Length = 3064
Score = 136 (52.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 26/61 (42%), Positives = 33/61 (54%)
Query: 77 KISSYAPDI-DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNG 135
K + Y P D CL C C GS C+ TG+C CKPGV G +CN C +P ++ G
Sbjct: 2003 KENYYKPPAQDACLPCDCFPHGSHSRACDMDTGQCACKPGVIGRQCNRCDNPFAEVTSLG 2062
Query: 136 C 136
C
Sbjct: 2063 C 2063
Score = 53 (23.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 15/53 (28%), Positives = 22/53 (41%)
Query: 22 LAQGPDNAGCPSTCG-CN-KLGSTEDACIE--DTEQCKCKQGVGGLKCDRCEP 70
+A AGC S C+ L C+ +T C+C GG C++ P
Sbjct: 1652 IANNGTRAGCASQRNFCDGTLCQNGGTCVNRWNTYLCECPLRFGGKNCEQAMP 1704
>UNIPROTKB|I3LI99 [details] [associations]
symbol:LAMB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050873 "brown fat cell differentiation" evidence=IEA]
[GO:0005610 "laminin-5 complex" evidence=IEA] GO:GO:0050873
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005610 GeneTree:ENSGT00620000087753
EMBL:CU856114 Ensembl:ENSSSCT00000026983 Uniprot:I3LI99
Length = 959
Score = 142 (55.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 35/118 (29%), Positives = 51/118 (43%)
Query: 12 WYGCCPDNKTLAQGPDNAGCPSTCGCN--KLGSTEDACIED-TEQCKCKQGVGGLKCDRC 68
W P+ DN G C C+ +L T QC C++G GGL C
Sbjct: 337 WAAAEPEQVAQLHLRDNDG-GGGCHCDPERLAKARGPTHPQFTGQCPCREGFGGLTCSTA 395
Query: 69 EPGYWGLSKISSYAPDIDGC--LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
L +Y GC L C C G+ C++ +GRC+C+PG+ G +C++C
Sbjct: 396 AIR---LCPDRTYEDVAAGCRALACDCDFRGTEGPGCDKASGRCLCRPGLTGPRCDQC 450
>UNIPROTKB|F1N812 [details] [associations]
symbol:SLC26A6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0007218
"neuropeptide signaling pathway" evidence=IEA] [GO:0008271
"secondary active sulfate transmembrane transporter activity"
evidence=IEA] [GO:0008272 "sulfate transport" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0007413 "axonal fasciculation" evidence=IEA]
InterPro:IPR000203 InterPro:IPR000742 InterPro:IPR000832
InterPro:IPR001879 InterPro:IPR001881 InterPro:IPR001902
InterPro:IPR002126 InterPro:IPR011547 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR017983 InterPro:IPR020894
Pfam:PF00002 Pfam:PF00008 Pfam:PF00028 Pfam:PF00916 Pfam:PF01825
PRINTS:PR00205 PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS00650
PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261
PROSITE:PS50268 SMART:SM00008 SMART:SM00112 SMART:SM00179
SMART:SM00181 SMART:SM00303 InterPro:IPR000152 GO:GO:0016021
GO:GO:0005886 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0008272 GO:GO:0007156
SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 OMA:DGRRVDM GO:GO:0008271
Gene3D:3.30.750.24 InterPro:IPR002645 SUPFAM:SSF52091
PROSITE:PS50801 Pfam:PF01740 TIGRFAMs:TIGR00815 EMBL:AADN02014037
EMBL:AADN02014038 EMBL:AADN02014039 EMBL:AADN02014040
IPI:IPI00594732 Ensembl:ENSGALT00000009205 ArrayExpress:F1N812
Uniprot:F1N812
Length = 3737
Score = 148 (57.2 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 46/152 (30%), Positives = 64/152 (42%)
Query: 2 GIYLKSCLDSWY-GCCPDNKTLAQGPDNA-GCPSTCGCNKLGSTEDACIEDTEQCKCKQG 59
G Y C+D+ + C + + P + G CG N G C +Q +C +G
Sbjct: 1634 GYYGGECVDACHLNPCKNKSVCRRKPGSPLGYVCECGGNFFGQY---CEHRMDQ-QCPKG 1689
Query: 60 V-GGLKCDRCE----PGYW-GLSKISS--------YAPD-IDGCLKCGCSQFGSVREDCE 104
G C C G+ +K + Y P D CL C C GS C
Sbjct: 1690 WWGNPSCGPCNCDVSKGFDPDCNKTNGQCHCKDFHYRPKGSDTCLPCDCYPVGSSSRSCN 1749
Query: 105 QMTGRCVCKPGVKGSKCNECLDPNKKLGPNGC 136
+ TGRC C+PGV G +CN C P ++ P+GC
Sbjct: 1750 KETGRCHCRPGVIGRQCNSCDSPFAEVTPSGC 1781
>UNIPROTKB|E2QZY0 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 CTD:59277 KO:K06845
OMA:RSQDFGK EMBL:AAEX03009952 EMBL:AAEX03009953 RefSeq:XP_532655.2
Ensembl:ENSCAFT00000010328 GeneID:475431 KEGG:cfa:475431
Uniprot:E2QZY0
Length = 628
Score = 139 (54.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 30/89 (33%), Positives = 38/89 (42%)
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED------CEQMTGR 109
C+ G C RC+PG++ + APD C C C GS C+ G
Sbjct: 362 CQHNTEGQHCQRCKPGFYRDLRRPFSAPD--ACKMCSCHPVGSAALPFSSVTFCDPSNGD 419
Query: 110 CVCKPGVKGSKCNECLDPNKKLGPNGCMP 138
C CKPGV G C+ C+ G GC P
Sbjct: 420 CPCKPGVAGPHCDRCMVGYWGFGDYGCRP 448
Score = 124 (48.7 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 37/116 (31%), Positives = 47/116 (40%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTE------DACIEDTEQCK 55
G + + C +Y D + PD C C C+ +GS C C
Sbjct: 368 GQHCQRCKPGFYR---DLRRPFSAPD--AC-KMCSCHPVGSAALPFSSVTFCDPSNGDCP 421
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV 111
CK GV G CDRC GYWG Y GC C C+ GS C+ +TG C+
Sbjct: 422 CKPGVAGPHCDRCMVGYWGFG---DY-----GCRPCDCA--GS----CDPLTGDCI 463
Score = 37 (18.1 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 107 TGRCVCKPGVKGSKCNEC 124
+G+C CK V G+ C
Sbjct: 503 SGKCECKEQVLGNSKAFC 520
>ZFIN|ZDB-GENE-030616-78 [details] [associations]
symbol:celsr1a "cadherin EGF LAG seven-pass G-type
receptor 1a" species:7955 "Danio rerio" [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0007156
"homophilic cell adhesion" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0042074 "cell migration
involved in gastrulation" evidence=IGI;IMP] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR020894 Pfam:PF00002 Pfam:PF00028 Pfam:PF01825
Pfam:PF02793 PRINTS:PR00205 PRINTS:PR00249 PROSITE:PS00232
PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261
PROSITE:PS50268 SMART:SM00008 SMART:SM00112 SMART:SM00181
SMART:SM00303 ZFIN:ZDB-GENE-030616-78 GO:GO:0016021 GO:GO:0005886
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0007156
SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 EMBL:CU855579
EMBL:AL645790 IPI:IPI00998840 Ensembl:ENSDART00000123617
ArrayExpress:F1QKG4 Bgee:F1QKG4 Uniprot:F1QKG4
Length = 2699
Score = 146 (56.5 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 47/168 (27%), Positives = 67/168 (39%)
Query: 4 YLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGL 63
Y C +YG +NK + P CP N + + + C + G
Sbjct: 1606 YTCECSQDYYGQYCENKV--EKP----CPRGWWGNPMCGPCNCDVSKGFNPDCNKTTG-- 1657
Query: 64 KCDRCEPGYWGLSKISSYAP-DIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN 122
+C RC+ Y Y P D D C C C G+ C+ TG+C CK GV G +CN
Sbjct: 1658 EC-RCKDNY--------YQPKDSDTCFPCDCFHLGANSRTCDPETGQCPCKAGVIGRQCN 1708
Query: 123 ECLDPNKKLGPNGCMPGMEVKPCNGEP----PVINLQTGVELDCGSGA 166
C +P ++ GC G E P + P N V ++C G+
Sbjct: 1709 RCDNPFSEVTSTGCEVGYEGCPKAFDSGIWWPRTNFGFPVAMNCPKGS 1756
>UNIPROTKB|H7C557 [details] [associations]
symbol:MEGF6 "Multiple epidermal growth factor-like domains
protein 6" species:9606 "Homo sapiens" [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
EMBL:AL512413 Pfam:PF12661 EMBL:AL513320 HGNC:HGNC:3232
ProteinModelPortal:H7C557 Ensembl:ENST00000485002 Uniprot:H7C557
Length = 1156
Score = 142 (55.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 46/135 (34%), Positives = 57/135 (42%)
Query: 8 CLDSWYGC-CPDNKTLAQGPDNAG--CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLK 64
C + W G C N+T PD G C +C C G T C T C+C GV G
Sbjct: 382 CPEGWTGLIC--NETCP--PDTFGKNCSFSCSCQN-GGT---CDSVTGACRCPPGVSGTN 433
Query: 65 C-DRCEPGYWGLSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN 122
C D C GY+G C K C C+ G C ++ G C+C PG+ G C+
Sbjct: 434 CEDGCPKGYYGKH-----------CRKKCNCANRGR----CHRLYGACLCDPGLYGRFCH 478
Query: 123 -ECLDPNKKLGPNGC 136
C P GP GC
Sbjct: 479 LTC--PPWAFGP-GC 490
Score = 129 (50.5 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 35/109 (32%), Positives = 47/109 (43%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGCL 89
C + C C + + C T C C G G C R C+ G+WG PD
Sbjct: 666 CQTRCSC----ANDGHCHPATGHCSCAPGWTGFSCQRACDTGHWG--------PDCSH-- 711
Query: 90 KCGCSQ-FGSVREDCEQMTGRCVCKPGVKGSKCNE-CLDPNKKLGPNGC 136
C CS GS C+ ++G C+C+ G G +C + C P GP GC
Sbjct: 712 PCNCSAGHGS----CDAISGLCLCEAGYVGPRCEQQC--PQGHFGP-GC 753
Score = 119 (46.9 bits), Expect = 0.00015, P = 0.00015
Identities = 50/168 (29%), Positives = 61/168 (36%)
Query: 24 QGPD-NAGCP-STCG--CNKLGSTEDA-CIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSK 77
QG D CP T G C+ S A C T QC+C G G C+ C G WGL
Sbjct: 563 QGEDCGQECPVGTFGVNCSSSCSCGGAPCHGVTGQCRCPPGRTGEDCEADCPEGRWGL-- 620
Query: 78 ISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN-- 134
GC + C Q + C+ TG C+C PG GS+C + P GP+
Sbjct: 621 ---------GCQEICPACQHAA---RCDPETGACLCLPGFVGSRCQDVC-PAGWYGPSCQ 667
Query: 135 ---GCMPGMEVKPCNGEPPVINLQTGVELD--CGSGANREDCPSDAYC 177
C P G TG C +G DC C
Sbjct: 668 TRCSCANDGHCHPATGHCSCAPGWTGFSCQRACDTGHWGPDCSHPCNC 715
Score = 115 (45.5 bits), Expect = 0.00048, P = 0.00048
Identities = 30/94 (31%), Positives = 43/94 (45%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGCL 89
C TC + G T C+ + C C +G GL C+ C P +G K S++
Sbjct: 360 CSLTCDDCRNGGT---CLLGLDGCDCPEGWTGLICNETCPPDTFG--KNCSFS------- 407
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
C C G+ C+ +TG C C PGV G+ C +
Sbjct: 408 -CSCQNGGT----CDSVTGACRCPPGVSGTNCED 436
>ZFIN|ZDB-GENE-990415-168 [details] [associations]
symbol:ntn1b "netrin 1b" species:7955 "Danio rerio"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0016358
"dendrite development" evidence=IGI] InterPro:IPR001134
PROSITE:PS50189 ZFIN:ZDB-GENE-990415-168 GO:GO:0005576
GO:GO:0016358 GO:GO:2001240 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 HSSP:P02468
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 KO:K06843 EMBL:AF017420
IPI:IPI00512636 RefSeq:NP_571073.1 UniGene:Dr.75773
ProteinModelPortal:O42203 STRING:O42203 PRIDE:O42203 GeneID:30192
KEGG:dre:30192 CTD:30192 InParanoid:O42203 NextBio:20806657
ArrayExpress:O42203 Bgee:O42203 Uniprot:O42203
Length = 602
Score = 138 (53.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 26/70 (37%), Positives = 34/70 (48%)
Query: 56 CKQGVGGLKCDRCEPGYW-GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKP 114
C+ G C C+ GY+ +SK S+ C C C G+ + C Q TG+C CK
Sbjct: 370 CRHNTAGRHCHYCKEGYYRDMSKAISHRR---ACKACDCHPVGAAGKTCNQTTGQCPCKD 426
Query: 115 GVKGSKCNEC 124
GV G CN C
Sbjct: 427 GVTGITCNRC 436
Score = 114 (45.2 bits), Expect = 0.00028, P = 0.00028
Identities = 38/154 (24%), Positives = 61/154 (39%)
Query: 35 CGCNKLGSTEDACIEDTEQ---CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKC 91
C CN S C++D E C+CK G +CDRC+P ++ + A + + C+ C
Sbjct: 284 CKCNGHASK---CVKDREGNLVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVAC 340
Query: 92 GCSQFGS-VREDCE--QMTGR-----CV-CKPGVKGSKCNECL-----DPNKKLGPNGCM 137
C+ R + E +++GR C+ C+ G C+ C D +K +
Sbjct: 341 HCNLHARRCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHYCKEGYYRDMSKAISHRRAC 400
Query: 138 PGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
+ P N TG + C G C
Sbjct: 401 KACDCHPVGAAGKTCNQTTG-QCPCKDGVTGITC 433
>UNIPROTKB|E9PTR0 [details] [associations]
symbol:E9PTR0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0005606
IPI:IPI00568879 Ensembl:ENSRNOT00000052028 ArrayExpress:E9PTR0
Uniprot:E9PTR0
Length = 1622
Score = 143 (55.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 52/177 (29%), Positives = 71/177 (40%)
Query: 14 GCCPDN-KTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCDRCEPG 71
GC P + + P AG C CN G + + C + + C C+ G C+RC+ G
Sbjct: 44 GCRPGYYRDIKSFP--AGRCVPCNCN--GHS-NRCQDGSGVCINCQHNTAGEHCERCQEG 98
Query: 72 YWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTG--RCVCKPGVKGSKCNECLDPNK 129
Y+G S I C C C S C G RC CKPG G++C C P
Sbjct: 99 YYG-SAIHG------SCRVCPCPHTNSFATGCAVDGGAVRCACKPGYTGAQCERCA-PGY 150
Query: 130 KLGPNGCMPGMEVKPCN----GEPPVINLQTG--VELDCGSGANREDCPSDAYCHIT 180
P G +PCN G+ + TG V + G+ E+C C +T
Sbjct: 151 FGNPQKF--GGSCQPCNCNSNGQFGTCDPLTGDCVSQEPKDGSPAEECDDCDSCVMT 205
>MGI|MGI:1888978 [details] [associations]
symbol:Ntn4 "netrin 4" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISS;IDA] [GO:0016322 "neuron
remodeling" evidence=IDA] [GO:0043237 "laminin-1 binding"
evidence=IDA] [GO:0060668 "regulation of branching involved in
salivary gland morphogenesis by extracellular matrix-epithelial
cell signaling" evidence=IDA] InterPro:IPR001134 PROSITE:PS50189
MGI:MGI:1888978 GO:GO:0016322 PROSITE:PS00022 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 GO:GO:0043237 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 CTD:59277 eggNOG:NOG329215
HOVERGEN:HBG082019 KO:K06845 OMA:RSQDFGK GO:GO:0060668
EMBL:AF268066 EMBL:AF281278 EMBL:AC124585 EMBL:AC151976
IPI:IPI00119840 RefSeq:NP_067295.2 UniGene:Mm.483868
ProteinModelPortal:Q9JI33 SMR:Q9JI33 STRING:Q9JI33
PhosphoSite:Q9JI33 PRIDE:Q9JI33 Ensembl:ENSMUST00000020204
GeneID:57764 KEGG:mmu:57764 HOGENOM:HOG000060085 InParanoid:Q9JI33
OrthoDB:EOG4M0F17 NextBio:313932 Bgee:Q9JI33 CleanEx:MM_NTN4
Genevestigator:Q9JI33 GermOnline:ENSMUSG00000020019 Uniprot:Q9JI33
Length = 628
Score = 138 (53.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 38/127 (29%), Positives = 47/127 (37%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQ-----------CK-CKQGVGGLKCDRCEPGYWGLSK 77
G P+ C K D C D C C+ G C RC+PG++ +
Sbjct: 324 GAPNECRTCKCNGHADTCHFDVNVWEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDLR 383
Query: 78 ISSYAPDIDGCLKCGCSQFGSVRED------CEQMTGRCVCKPGVKGSKCNECLDPNKKL 131
APD C C C GS C+ G C CKPGV G C+ C+
Sbjct: 384 RPFSAPD--ACKACSCHPVGSAILPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGF 441
Query: 132 GPNGCMP 138
G GC P
Sbjct: 442 GDYGCRP 448
Score = 125 (49.1 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 37/116 (31%), Positives = 49/116 (42%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGS------TEDACIEDTEQCK 55
G + + C +Y D + PD C + C C+ +GS + C C
Sbjct: 368 GQHCQRCKPGFYR---DLRRPFSAPD--ACKA-CSCHPVGSAILPFSSVTFCDPSNGDCP 421
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV 111
CK GV G CDRC GYWG Y GC C C+ GS C+ +TG C+
Sbjct: 422 CKPGVAGPHCDRCMVGYWGFG---DY-----GCRPCDCA--GS----CDPLTGDCI 463
Score = 36 (17.7 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 107 TGRCVCKPGVKGS 119
+G+C CK V G+
Sbjct: 503 SGKCECKEQVLGN 515
>UNIPROTKB|F1SQR3 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060668 "regulation of branching involved in salivary
gland morphogenesis by extracellular matrix-epithelial cell
signaling" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0016322 "neuron remodeling" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0016322 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 KO:K06845 OMA:RSQDFGK
GO:GO:0060668 EMBL:CU442719 RefSeq:XP_003481795.1
Ensembl:ENSSSCT00000000980 GeneID:100516554 KEGG:ssc:100516554
Uniprot:F1SQR3
Length = 628
Score = 138 (53.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 39/127 (30%), Positives = 47/127 (37%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQ-----------CK-CKQGVGGLKCDRCEPGYWGLSK 77
G P C K DAC D C C+ G C RC+PG++ +
Sbjct: 324 GSPKECRTCKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLR 383
Query: 78 ISSYAPDIDGCLKCGCSQFGSVRED------CEQMTGRCVCKPGVKGSKCNECLDPNKKL 131
APD C C C GS C+ G C CKPGV G C+ C+
Sbjct: 384 RPFSAPD--ACKLCSCHPVGSAVLPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGF 441
Query: 132 GPNGCMP 138
G GC P
Sbjct: 442 GEYGCRP 448
Score = 122 (48.0 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 37/115 (32%), Positives = 48/115 (41%)
Query: 2 GIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGS------TEDACIEDTEQCK 55
G + + C +Y D + PD C C C+ +GS + C C
Sbjct: 368 GQHCQRCKPGFYR---DLRRPFSAPD--AC-KLCSCHPVGSAVLPFSSVTFCDPSNGDCP 421
Query: 56 CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRC 110
CK GV G CDRC GYWG + Y GC C C+ GS C+ +TG C
Sbjct: 422 CKPGVAGPHCDRCMVGYWGFGE---Y-----GCRPCDCA--GS----CDPLTGDC 462
Score = 37 (18.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 107 TGRCVCKPGVKGSKCNEC 124
+G+C CK V G+ C
Sbjct: 503 SGKCECKEQVLGNSKAFC 520
>RGD|628776 [details] [associations]
symbol:Lama3 "laminin, alpha 3" species:10116 "Rattus norvegicus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005604 "basement
membrane" evidence=ISO] [GO:0005608 "laminin-3 complex"
evidence=IDA] [GO:0005610 "laminin-5 complex" evidence=ISO]
[GO:0005913 "cell-cell adherens junction" evidence=IDA] [GO:0016337
"cell-cell adhesion" evidence=IMP] [GO:0030056 "hemidesmosome"
evidence=IDA] [GO:0031581 "hemidesmosome assembly" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
RGD:628776 GO:GO:0030155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005913 GO:GO:0030334
GO:GO:0016337 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0030056 Pfam:PF02210
GO:GO:0031581 GO:GO:0045995 eggNOG:NOG292643 GO:GO:0005606
GO:GO:0005608 HOGENOM:HOG000048708 HOVERGEN:HBG100777 EMBL:U61261
IPI:IPI00189741 UniGene:Rn.10597 HSSP:P35070
ProteinModelPortal:P70570 STRING:P70570 PRIDE:P70570
UCSC:RGD:628776 NextBio:657622 Genevestigator:P70570 Uniprot:P70570
Length = 1725
Score = 143 (55.4 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 51/177 (28%), Positives = 70/177 (39%)
Query: 14 GCCPDN-KTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCDRCEPG 71
GC P + + P P C CN G + + C + + C C+ G C+RC+ G
Sbjct: 58 GCRPGYYRDIKSFPAGRSVP--CNCN--GHS-NRCQDGSGVCINCQHNTAGEHCERCKRG 112
Query: 72 YWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTG--RCVCKPGVKGSKCNECLDPNK 129
Y+G S I C C C S C G RC CKPG G++C C P
Sbjct: 113 YYG-SAIHG------SCRVCPCPHTNSFATGCAVDGGAVRCACKPGYTGAQCERCA-PGY 164
Query: 130 KLGPNGCMPGMEVKPCN----GEPPVINLQTG--VELDCGSGANREDCPSDAYCHIT 180
P G +PCN G+ + TG V + G+ E+C C +T
Sbjct: 165 FGNPQKF--GGSCQPCNCNSNGQFGTCDPLTGDCVSQEPKDGSPAEECDDCDSCVMT 219
>FB|FBgn0031981 [details] [associations]
symbol:CG7466 species:7227 "Drosophila melanogaster"
[GO:0016020 "membrane" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002165 InterPro:IPR015915 InterPro:IPR018097
Pfam:PF01437 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
EMBL:AE014134 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 InterPro:IPR009030 SUPFAM:SSF57184
HSSP:P35555 Pfam:PF12661 InterPro:IPR011043 SUPFAM:SSF50965
OMA:GHSMVFH FlyBase:FBgn0031981 RefSeq:NP_609180.2 UniGene:Dm.2153
ProteinModelPortal:Q9VLT6 SMR:Q9VLT6 MINT:MINT-1329221
EnsemblMetazoa:FBtr0079541 GeneID:34099 KEGG:dme:Dmel_CG7466
UCSC:CG7466-RA InParanoid:Q9VLT6 PhylomeDB:Q9VLT6 GenomeRNAi:34099
NextBio:786863 ArrayExpress:Q9VLT6 Bgee:Q9VLT6 Uniprot:Q9VLT6
Length = 2898
Score = 145 (56.1 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 47/142 (33%), Positives = 62/142 (43%)
Query: 7 SCLDSWYGCC-------PDNKTL--AQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KC 56
SC+ + Y C P + T A G A C +CGCN ST C E +C +C
Sbjct: 1227 SCVRTCYELCQNGNCSGPPDYTCRCALGWTGADCGLSCGCNN-HST---CNERLGKCDQC 1282
Query: 57 KQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED---CEQMTGRCVCK 113
+ G KC+RC G +G ++ AP GCL C C+ G+ +D C G C CK
Sbjct: 1283 QDWSEGEKCERCRQGSYG----NATAPH--GCLPCECNGHGN--QDLGVCNVSNGECYCK 1334
Query: 114 PGVKGSKCNECLDPNKKLGPNG 135
+G C C P P G
Sbjct: 1335 DNTQGLNCELCA-PGYYGDPRG 1355
>ZFIN|ZDB-GENE-000329-4 [details] [associations]
symbol:notch2 "notch homolog 2" species:7955 "Danio
rerio" [GO:0030154 "cell differentiation" evidence=IEA] [GO:0050793
"regulation of developmental process" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0060351
"cartilage development involved in endochondral bone morphogenesis"
evidence=IGI] [GO:0060325 "face morphogenesis" evidence=IGI]
[GO:0042246 "tissue regeneration" evidence=IEP] [GO:0001889 "liver
development" evidence=IGI] [GO:0001946 "lymphangiogenesis"
evidence=IMP] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645 Pfam:PF07684
PIRSF:PIRSF002279 PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004 SMART:SM00179
SMART:SM00181 SMART:SM00248 InterPro:IPR000152
ZFIN:ZDB-GENE-000329-4 GO:GO:0016021 GO:GO:0030154
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0007219 GO:GO:0005509 GO:GO:0001889
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001946 PROSITE:PS01186
GO:GO:0042246 PROSITE:PS00010 GO:GO:0050793 GO:GO:0060325
GO:GO:0060351 Pfam:PF12661 GeneTree:ENSGT00700000104305
SUPFAM:SSF90193 InterPro:IPR024600 Pfam:PF11936 InterPro:IPR022336
PRINTS:PR01985 EMBL:CT573380 EMBL:FP016062 IPI:IPI00997919
Ensembl:ENSDART00000032967 Ensembl:ENSDART00000123104
Uniprot:F1R9H8
Length = 2475
Score = 144 (55.7 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 58/195 (29%), Positives = 79/195 (40%)
Query: 7 SCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCK----CK-QGV- 60
+CL S C NK + N TC GS C+ DT++C CK +GV
Sbjct: 148 ACLSS--PCA--NKGICNALPNREYSCTCAPGFHGSR---CLNDTDECVDPLVCKNKGVC 200
Query: 61 ----GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGV 116
G +C+ C+PG+ GL S Y P C C G+ R+ E T C C PG
Sbjct: 201 VNTIGSYRCN-CQPGFTGLDCGSPYFP----CSPSPCQNGGTCRQTTET-TYVCHCLPGF 254
Query: 117 KGSKCNECLD--PNKKLGPNG--CMPGMEVKPCNGEPPVINLQTGVELD-CGSGANREDC 171
G+ C +D P+ + NG CM G+ C P ++D C N C
Sbjct: 255 NGTNCEVNIDDCPDHRC-QNGATCMDGVNTYNCQCPPEWTGQFCTDDVDECRLQPNA--C 311
Query: 172 PSDAYCHITQNFARC 186
+ C T+N C
Sbjct: 312 QNGGTCSNTRNGYNC 326
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 46/182 (25%), Positives = 65/182 (35%)
Query: 16 CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCK----CKQGVGGLKCDRCEPG 71
C N G + CPS + D C+ C+ CK G C+ C PG
Sbjct: 392 CDTNPV--NGKFSCNCPSGYKGSTCAEDIDECVIGPNPCEHGGSCKNTEGSFTCN-CAPG 448
Query: 72 YWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC----NECLDP 127
Y G DI+ C C + + T C+C PG G+ C NECL
Sbjct: 449 YTG----PRCEQDINECGSNPCQNDATCLDQIGDYT--CICMPGFDGTHCENDINECLS- 501
Query: 128 NKKLGPNGCMPGME--VKPC----NGEPPVINLQTGVELDCGSGANREDCPSDAYCHITQ 181
+ L C+ + V C GE +++ C +GA D P+ C +
Sbjct: 502 SPCLNNGRCLDQVSRFVCECPQGFTGETCQVDIDECASTPCHNGAKCLDRPNGYECECAE 561
Query: 182 NF 183
F
Sbjct: 562 GF 563
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 56/204 (27%), Positives = 76/204 (37%)
Query: 6 KSCLDSWYGCC--PDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCK---CKQG- 59
K CL+ C P + P TC C+ G C ED ++CK C+ G
Sbjct: 829 KHCLEKLIPCASQPCQRRGVCQPSLDYTSYTCKCHS-GWEGAQCTEDKDECKKSPCQNGA 887
Query: 60 -----VGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGR--CVC 112
VG +C+ C PGY G + +ID C C G+ C GR C C
Sbjct: 888 RCVNIVGSYRCE-CPPGYSG----DNCQTNIDDCSSNPCRNGGT----CVDKVGRYLCEC 938
Query: 113 KPGVKGSKCNECLDPNKKLGP--NG--CMPGMEVKPCNGEPPV--INLQTGVELDCGSGA 166
+ G G +C E +D P NG C + C P IN + + DC
Sbjct: 939 RAGFYGERCEEEVDECAS-NPCWNGGHCTDYVNSYTCQCPPGYDGINCERDIP-DC---- 992
Query: 167 NREDCPSDAYCHITQNFARC-CRK 189
C ++ C N C CR+
Sbjct: 993 TETSCLNNGTCVDGINHFSCRCRQ 1016
>MGI|MGI:1100883 [details] [associations]
symbol:Celsr1 "cadherin, EGF LAG seven-pass G-type receptor
1 (flamingo homolog, Drosophila)" species:10090 "Mus musculus"
[GO:0001702 "gastrulation with mouth forming second" evidence=NAS]
[GO:0001736 "establishment of planar polarity" evidence=IMP]
[GO:0001764 "neuron migration" evidence=IMP] [GO:0001843 "neural
tube closure" evidence=IGI;IMP] [GO:0001942 "hair follicle
development" evidence=IMP] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=NAS] [GO:0004930 "G-protein coupled receptor
activity" evidence=NAS] [GO:0005509 "calcium ion binding"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=TAS] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0007165 "signal transduction" evidence=NAS] [GO:0007166 "cell
surface receptor signaling pathway" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=NAS]
[GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0007266 "Rho protein signal transduction" evidence=IMP]
[GO:0007267 "cell-cell signaling" evidence=NAS] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007417
"central nervous system development" evidence=NAS] [GO:0007626
"locomotory behavior" evidence=IMP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IMP] [GO:0016020 "membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032956 "regulation of actin cytoskeleton organization"
evidence=IMP] [GO:0042060 "wound healing" evidence=IGI] [GO:0042249
"establishment of planar polarity of embryonic epithelium"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0045176 "apical protein localization" evidence=IMP] [GO:0046928
"regulation of neurotransmitter secretion" evidence=NAS]
[GO:0046983 "protein dimerization activity" evidence=NAS]
[GO:0048105 "establishment of body hair planar orientation"
evidence=IMP] [GO:0060488 "orthogonal dichotomous subdivision of
terminal units involved in lung branching morphogenesis"
evidence=IMP] [GO:0060489 "planar dichotomous subdivision of
terminal units involved in lung branching morphogenesis"
evidence=IMP] [GO:0060490 "lateral sprouting involved in lung
morphogenesis" evidence=IMP] [GO:0090179 "planar cell polarity
pathway involved in neural tube closure" evidence=IGI] [GO:0090251
"protein localization involved in establishment of planar polarity"
evidence=IDA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001879 InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR017981 InterPro:IPR020894
Pfam:PF00002 Pfam:PF00008 Pfam:PF00028 Pfam:PF01825 Pfam:PF02793
PRINTS:PR00205 PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS00649
PROSITE:PS00650 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008 SMART:SM00112
SMART:SM00181 SMART:SM00303 InterPro:IPR000152 MGI:MGI:1100883
GO:GO:0001764 GO:GO:0005887 GO:GO:0009952 GO:GO:0004930
GO:GO:0046928 GO:GO:0007218 GO:GO:0005509 GO:GO:0007267
GO:GO:0007626 GO:GO:0007417 GO:GO:0046983 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0042472 GO:GO:0001942
GO:GO:0001702 PROSITE:PS01186 GO:GO:0007266 GO:GO:0001843
eggNOG:NOG12793 GO:GO:0042060 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS00010
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0032956
GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003
Gene3D:2.60.40.60 GeneTree:ENSGT00700000104170 GO:GO:0045176
Pfam:PF02210 CTD:9620 HOGENOM:HOG000231346 HOVERGEN:HBG050887
KO:K04600 OMA:NKPNIGH OrthoDB:EOG4KKZ23 GO:GO:0048105 GO:GO:0042249
GO:GO:0060490 GO:GO:0060488 GO:GO:0090179 GO:GO:0060489
GO:GO:0090251 EMBL:AF031572 EMBL:AC116764 EMBL:AC139513
IPI:IPI00127701 PIR:T14119 RefSeq:NP_034016.2 UniGene:Mm.22680
STRING:O35161 PhosphoSite:O35161 PaxDb:O35161 PRIDE:O35161
Ensembl:ENSMUST00000016172 GeneID:12614 KEGG:mmu:12614
UCSC:uc007xdt.1 InParanoid:O35161 NextBio:281774 Bgee:O35161
Genevestigator:O35161 GermOnline:ENSMUSG00000016028 Uniprot:O35161
Length = 3034
Score = 136 (52.9 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 26/61 (42%), Positives = 33/61 (54%)
Query: 77 KISSYAPDI-DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNG 135
K + Y P D CL C C GS C+ TG+C CKPGV G +CN C +P ++ G
Sbjct: 2003 KENYYKPPAQDACLPCDCFPHGSHSRACDMDTGQCACKPGVIGRQCNRCDNPFAEVTSLG 2062
Query: 136 C 136
C
Sbjct: 2063 C 2063
Score = 50 (22.7 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 14/53 (26%), Positives = 21/53 (39%)
Query: 22 LAQGPDNAGCPSTCG-CNKLGSTEDA-CIE--DTEQCKCKQGVGGLKCDRCEP 70
+A AGC S C+ C+ +T C+C GG C++ P
Sbjct: 1652 IANNGTRAGCASQRNFCDGTSCQNGGTCVNRWNTYLCECPLRFGGKNCEQAMP 1704
>FB|FBgn0024836 [details] [associations]
symbol:stan "starry night" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=IEA;ISS]
[GO:0007156 "homophilic cell adhesion" evidence=ISS;IDA;TAS]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA;ISS]
[GO:0016339 "calcium-dependent cell-cell adhesion"
evidence=ISS;IMP] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEP;IMP;NAS] [GO:0007409 "axonogenesis" evidence=IMP;NAS]
[GO:0005911 "cell-cell junction" evidence=IDA] [GO:0005057
"receptor signaling protein activity" evidence=ISM;IMP] [GO:0016358
"dendrite development" evidence=IEP] [GO:0007367 "segment polarity
determination" evidence=IEP;IMP] [GO:0016021 "integral to membrane"
evidence=IEA;ISM;ISS;NAS] [GO:0048813 "dendrite morphogenesis"
evidence=IMP;TAS] [GO:0007165 "signal transduction" evidence=ISS]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS] [GO:0050839 "cell adhesion molecule binding"
evidence=ISS] [GO:0005887 "integral to plasma membrane"
evidence=ISS] [GO:0004872 "receptor activity" evidence=ISS]
[GO:0016318 "ommatidial rotation" evidence=IMP;NAS] [GO:0048057
"R3/R4 development" evidence=IMP] [GO:0042067 "establishment of
ommatidial planar polarity" evidence=IMP;TAS] [GO:0007164
"establishment of tissue polarity" evidence=NAS] [GO:0016319
"mushroom body development" evidence=IMP] [GO:0030177 "positive
regulation of Wnt receptor signaling pathway" evidence=NAS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=TAS] [GO:0007464 "R3/R4 cell fate commitment"
evidence=NAS] [GO:0001736 "establishment of planar polarity"
evidence=IMP;TAS] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0001738 "morphogenesis of a polarized epithelium" evidence=IMP]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0050770 "regulation
of axonogenesis" evidence=IDA] [GO:0051963 "regulation of synapse
assembly" evidence=IDA] [GO:0035159 "regulation of tube length,
open tracheal system" evidence=IMP] [GO:0070593 "dendrite
self-avoidance" evidence=IMP] [GO:0090175 "regulation of
establishment of planar polarity" evidence=IGI] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS00649 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00112 SMART:SM00179 SMART:SM00181 SMART:SM00303
EMBL:AE013599 GO:GO:0007411 GO:GO:0005887 GO:GO:0016055
GO:GO:0004930 GO:GO:0007218 GO:GO:0007464 GO:GO:0005509
GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0048813 GO:GO:0050770 GO:GO:0051963
GO:GO:0016319 GO:GO:0005057 PROSITE:PS01186 eggNOG:NOG12793
GO:GO:0050839 GO:GO:0007367 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0016339 GO:GO:0007156
GO:GO:0004888 GO:GO:0030178 GO:GO:0030177 GO:GO:0035159
SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 KO:K04600 OMA:YILRAYA
GO:GO:0070593 EMBL:AF172329 EMBL:AB028498 RefSeq:NP_001188903.1
RefSeq:NP_724962.3 UniGene:Dm.4360 ProteinModelPortal:Q9V5N8
SMR:Q9V5N8 IntAct:Q9V5N8 STRING:Q9V5N8 PaxDb:Q9V5N8
EnsemblMetazoa:FBtr0088214 EnsemblMetazoa:FBtr0303223 GeneID:36125
KEGG:dme:Dmel_CG11895 CTD:36125 FlyBase:FBgn0024836
InParanoid:Q9V5N8 OrthoDB:EOG4X69Q2 PhylomeDB:Q9V5N8
GenomeRNAi:36125 NextBio:796977 Bgee:Q9V5N8 GermOnline:CG11895
GO:GO:0048057 Uniprot:Q9V5N8
Length = 3579
Score = 145 (56.1 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 43/138 (31%), Positives = 61/138 (44%)
Query: 14 GCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLK-CD--RCE- 69
G C N +L +G D C CN D C ++ +Q C G G + C RC+
Sbjct: 2011 GVCRANTSLPRGYD-------CECNSSSRHGDYCEKELQQ-PCPGGWWGERVCGPCRCDL 2062
Query: 70 -PGYW-------G--LSKISSYAPDID-GCLKCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
GY G K + Y P + CL C C GS C +TG+C C+ GV G
Sbjct: 2063 AQGYHPDCNKTTGQCYCKTNHYQPPNETACLSCDCYSIGSFSGACNPLTGQCECREGVIG 2122
Query: 119 SKCNECLDPNKKLGPNGC 136
+C+ C +P ++ +GC
Sbjct: 2123 RRCDSCSNPYAEVTLSGC 2140
>UNIPROTKB|A6BM72 [details] [associations]
symbol:MEGF11 "Multiple epidermal growth factor-like
domains protein 11" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016323 "basolateral
plasma membrane" evidence=IEA] [GO:0010842 "retina layer formation"
evidence=ISS] [GO:0034109 "homotypic cell-cell adhesion"
evidence=ISS] InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00181 GO:GO:0016021 GO:GO:0016323
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0010842
GO:GO:0034109 HOGENOM:HOG000294130 Pfam:PF12661 HOVERGEN:HBG108333
OrthoDB:EOG42JNQJ EMBL:AB058677 EMBL:AB300051 EMBL:AY358226
EMBL:AC011847 EMBL:AC084854 EMBL:AC087382 EMBL:BC117419
EMBL:BC126313 EMBL:AL834326 IPI:IPI00064606 IPI:IPI00432703
IPI:IPI00796004 IPI:IPI00872029 RefSeq:NP_115821.2
UniGene:Hs.712886 ProteinModelPortal:A6BM72 SMR:A6BM72
IntAct:A6BM72 MINT:MINT-2877220 STRING:A6BM72 PhosphoSite:A6BM72
PRIDE:A6BM72 Ensembl:ENST00000288745 Ensembl:ENST00000360698
Ensembl:ENST00000395614 Ensembl:ENST00000395625
Ensembl:ENST00000409699 Ensembl:ENST00000422354 GeneID:84465
KEGG:hsa:84465 UCSC:uc002apl.2 UCSC:uc002apm.2 CTD:84465
GeneCards:GC15M066187 H-InvDB:HIX0018384 HGNC:HGNC:29635
HPA:HPA017982 MIM:612454 neXtProt:NX_A6BM72 PharmGKB:PA144596411
InParanoid:A6BM72 OMA:ECMNNST ChiTaRS:MEGF11 GenomeRNAi:84465
NextBio:74270 ArrayExpress:A6BM72 Bgee:A6BM72 CleanEx:HS_MEGF11
Genevestigator:A6BM72 Uniprot:A6BM72
Length = 1044
Score = 139 (54.0 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 54/189 (28%), Positives = 68/189 (35%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
C + G + +G GC C C+ +C T C C+ G G C+
Sbjct: 335 CEPGYKGPRCQERLCPEGLHGPGCTLPCPCD--ADNTISCHPVTGACTCQPGWSGHHCNE 392
Query: 68 -CEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN-EC 124
C GY+G DGC L C C Q G+ DC +TG C C PG G C C
Sbjct: 393 SCPVGYYG-----------DGCQLPCTC-QNGA---DCHSITGGCTCAPGFMGEVCAVSC 437
Query: 125 LDPNKKLGPN-----GCMPGMEVKPCNGEPPVINLQTGVE--LDCGSGANREDCPSDAYC 177
GPN C G P +G G++ L C SG +C C
Sbjct: 438 AAGT--YGPNCSSICSCNNGGTCSPVDGSCTCKEGWQGLDCTLPCPSGTWGLNCNESCTC 495
Query: 178 HITQNFARC 186
N A C
Sbjct: 496 ---ANGAAC 501
Score = 129 (50.5 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 35/117 (29%), Positives = 46/117 (39%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
CL W G D+ T G C +C C GS C + C+C G G C R
Sbjct: 553 CLAGWTGIRCDS-TCPPGRWGPNCSVSCSCENGGS----CSPEDGSCECAPGFRGPLCQR 607
Query: 68 -CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
C PG++G GC + C C ++G C C PG G+ CN+
Sbjct: 608 ICPPGFYG-----------HGCAQ-PCPLCVHSSRPCHHISGICECLPGFSGALCNQ 652
Score = 122 (48.0 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 48/153 (31%), Positives = 62/153 (40%)
Query: 47 CIEDTEQCKCKQGVGGLKC-DRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQ 105
C T QC C G G +C + C G +G + S + C C G C
Sbjct: 283 CDHVTGQCHCTAGYMGDRCQEECPFGSFGF-QCSQH---------CDCHNGGQ----CSP 328
Query: 106 MTGRCVCKPGVKGSKCNECLDPNKKLGPNGC-MPGMEVKPCNGEPPV-INLQTGVELDCG 163
TG C C+PG KG +C E L P GP GC +P PC+ + + + TG C
Sbjct: 329 TTGACECEPGYKGPRCQERLCPEGLHGP-GCTLPC----PCDADNTISCHPVTGA-CTCQ 382
Query: 164 SGAN----REDCPSDAY---CHIT---QNFARC 186
G + E CP Y C + QN A C
Sbjct: 383 PGWSGHHCNESCPVGYYGDGCQLPCTCQNGADC 415
Score = 122 (48.0 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 52/164 (31%), Positives = 65/164 (39%)
Query: 33 STCGCNKLGSTEDACIE-DTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG--CL 89
S C C + D CI TE+C + V C CEPG+ G S D G C
Sbjct: 86 SQC-CPGYYESGDFCIPLCTEECVHGRCVSPDTC-HCEPGWGGPDCSSGCDSDHWGPHCS 143
Query: 90 -KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE-CLDPNKKLG---PNGCMPGMEVKP 144
+C C Q G++ C +TG CVC G +G +C E C G P C G P
Sbjct: 144 NRCQC-QNGAL---CNPITGACVCAAGFRGWRCEELCAPGTHGKGCQLPCQCRHGASCDP 199
Query: 145 CNGEPPVINLQTGVELD--CGSGANREDCPSDAYCHITQNFARC 186
GE TGV + C G++ C C QN C
Sbjct: 200 RAGECLCAPGYTGVYCEELCPPGSHGAHCELRCPC---QNGGTC 240
Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
Identities = 47/162 (29%), Positives = 63/162 (38%)
Query: 7 SCLDSWYG--C---CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVG 61
SC W G C CPD G C C C S D C T C C G
Sbjct: 509 SCTPGWLGDTCELPCPD------GTFGLNCSEHCDC----SHADGCDPVTGHCCCLAGWT 558
Query: 62 GLKCDR-CEPGYWGLS-KIS-------SYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVC 112
G++CD C PG WG + +S S +P+ DG +C G + C++ +C
Sbjct: 559 GIRCDSTCPPGRWGPNCSVSCSCENGGSCSPE-DGSCECAPGFRGPL---CQR-----IC 609
Query: 113 KPGVKGSKCNE----CLDPNKKL----GPNGCMPGMEVKPCN 146
PG G C + C+ ++ G C+PG CN
Sbjct: 610 PPGFYGHGCAQPCPLCVHSSRPCHHISGICECLPGFSGALCN 651
Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
Identities = 51/182 (28%), Positives = 62/182 (34%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAG--CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKC 65
C W G PD + D+ G C + C C G+ C T C C G G +C
Sbjct: 120 CEPGWGG--PDCSSGCDS-DHWGPHCSNRCQCQN-GAL---CNPITGACVCAAGFRGWRC 172
Query: 66 DR-CEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
+ C PG G GC L C C S C+ G C+C PG G C E
Sbjct: 173 EELCAPGTHG-----------KGCQLPCQCRHGAS----CDPRAGECLCAPGYTGVYCEE 217
Query: 124 CLDPNKKLGPN-----GCMPGMEVKPCNGEPPVINLQTGVEL--DCGSGANREDCPSDAY 176
P G + C G GE TG C G ++C D
Sbjct: 218 LCPPGSH-GAHCELRCPCQNGGTCHHITGECACPPGWTGAVCAQPCPPGTFGQNCSQDCP 276
Query: 177 CH 178
CH
Sbjct: 277 CH 278
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 32/110 (29%), Positives = 51/110 (46%)
Query: 31 CPSTC-G--CNKLGSTED--ACIEDTEQCKCKQGVGGLKCD-RCEPGYWGLSKISSYAPD 84
CP+ G C ++ ++ +C + +C C+ G G C+ RC PG +G Y
Sbjct: 740 CPAAFFGKDCGRVCQCQNGASCDHISGKCTCRTGFTGQHCEQRCAPGTFG------Y--- 790
Query: 85 IDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGP 133
GC + C C C+ +TG C C PG KG +C++ ++L P
Sbjct: 791 --GCQQLCECMN----NSTCDHVTGTCYCSPGFKGIRCDQAALMMEELNP 834
>MGI|MGI:2446294 [details] [associations]
symbol:Megf8 "multiple EGF-like-domains 8" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0060287
"epithelial cilium movement involved in determination of left/right
asymmetry" evidence=IMP] [GO:0061371 "determination of heart
left/right asymmetry" evidence=ISO;IMP] [GO:0071907 "determination
of digestive tract left/right asymmetry" evidence=ISO;IMP]
[GO:1900164 "nodal signaling pathway involved in determination of
lateral mesoderm left/right asymmetry" evidence=ISO]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002165
InterPro:IPR015915 InterPro:IPR018097 Pfam:PF01437 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 MGI:MGI:2446294 GO:GO:0016021 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 CTD:1954 eggNOG:NOG304142
HOVERGEN:HBG108128 OMA:GHSMVFH EMBL:EU723517 EMBL:BC031185
EMBL:BC036727 EMBL:BC051121 EMBL:BC060277 EMBL:AK122377
EMBL:AK030408 IPI:IPI00930841 RefSeq:NP_001153872.1
UniGene:Mm.38527 ProteinModelPortal:P60882 SMR:P60882
PhosphoSite:P60882 PaxDb:P60882 PRIDE:P60882
Ensembl:ENSMUST00000128119 GeneID:269878 KEGG:mmu:269878
UCSC:uc009fsj.2 InParanoid:B3GR00 OrthoDB:EOG4JHCDR NextBio:393077
Bgee:P60882 CleanEx:MM_MEGF8 Genevestigator:P60882
GermOnline:ENSMUSG00000045039 Uniprot:P60882
Length = 2789
Score = 143 (55.4 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 52/181 (28%), Positives = 68/181 (37%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIE-DTEQC-KCKQGVGGLKC 65
C W P T A GP C CGC S C C +C+ G C
Sbjct: 1137 CDLGWTSDLPP-PTPAPGPPAPRCSRDCGC----SFHSHCRRRGPGYCDECQDWTWGEHC 1191
Query: 66 DRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED-CEQMTGRCVCKPGVKGSKCNEC 124
+RC PG +G + S GC C C+ G R C+ +TG C C+ +G+ C C
Sbjct: 1192 ERCRPGSFGNATGSG------GCRPCQCNGHGDPRRGHCDNLTGLCFCQDHTEGAHCQIC 1245
Query: 125 LDPNKKLGPNGCMPGMEVKPCNGEPPVINLQT--------GVELDCGSGANREDCPSDAY 176
P P G + C G + N+ + G L G GA R P +Y
Sbjct: 1246 -SPGYYGDPRA--GGSCFRECGGRALLTNVSSVALGSRRFGGLLPPGGGAARAG-PGLSY 1301
Query: 177 C 177
C
Sbjct: 1302 C 1302
>ZFIN|ZDB-GENE-080807-4 [details] [associations]
symbol:hspg2 "heparan sulfate proteoglycan 2"
species:7955 "Danio rerio" [GO:0007519 "skeletal muscle tissue
development" evidence=IMP] [GO:0001525 "angiogenesis" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068
PROSITE:PS50835 SMART:SM00181 SMART:SM00192 ZFIN:ZDB-GENE-080807-4
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0001525
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 InterPro:IPR002049
InterPro:IPR001791 InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 GeneTree:ENSGT00530000063501
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0007519 Pfam:PF12661 InterPro:IPR018031
InterPro:IPR000034 Pfam:PF00052 SMART:SM00281 PROSITE:PS51115
EMBL:CR936463 EMBL:CR855310 IPI:IPI00889358
Ensembl:ENSDART00000111029 Bgee:F1RCP6 Uniprot:F1RCP6
Length = 3422
Score = 143 (55.4 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 45/143 (31%), Positives = 61/143 (42%)
Query: 7 SCLDSWYGC-CPDNKTLAQGPDNAGCPSTCG-CNKLGSTED---ACI--EDTEQ-CKCKQ 58
+CL + G C + + G G P C C LG T + +C D + C+C
Sbjct: 1099 NCLHNTIGRRCENCISGYYGNPKTGDPQACRPCPCLGQTSNQPSSCYLGSDGQPVCECPA 1158
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKC-GCSQFGSVREDCEQMTGRCVCKPGVK 117
G G +C+RC PGY G ++ C C Q GS E C TG C CK V+
Sbjct: 1159 GYTGRRCERCAPGYIGNPQLGQRCTPGSNNGDCYRCDQSGS--EGCSG-TGVCRCKMNVE 1215
Query: 118 GSKCNECLDPNKKLGP---NGCM 137
G C+ C L P +GC+
Sbjct: 1216 GPTCSSCKQGTFHLSPANKDGCL 1238
Score = 132 (51.5 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 46/186 (24%), Positives = 73/186 (39%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGYW 73
C P + + GP C C CN S AC + C C+ G +C++C+PG++
Sbjct: 670 CSPGFERVP-GPYLGICAG-CNCNGHAS---ACDPVSGHCLSCQHKTEGAQCEKCKPGFF 724
Query: 74 GLSKISSYAPDIDGCLKCGCSQFGSVR---EDC---EQMTGRC-VCKPGVKGSKCNECLD 126
G Y D C C C + R + C C C+ G G +C +C
Sbjct: 725 GDPSRGQY----DDCKPCPCPYTETSRRFSDTCFLDHDNQATCDACREGYTGRRCEKCAP 780
Query: 127 P--NKKLGPNG-CMPGME-VKPCNGEPPVINLQTGVELDCG-SGANREDCPSDAYCHITQ 181
L PNG C+P + C+ + + +GA ++C + A+ H+T
Sbjct: 781 GYVGNPLQPNGKCIPAASPISKCDNRGTINPISKPCYCKSNVAGALCDECKTGAF-HLTA 839
Query: 182 NFARCC 187
+ C
Sbjct: 840 DNPEGC 845
Score = 124 (48.7 bits), Expect = 0.00010, P = 0.00010
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 50 DTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGR 109
+ E+C+C G GL C+ C PG+ ++ P + C C C+ S C+ ++G
Sbjct: 652 EVEECRCPAGYSGLSCESCSPGF---ERVPG--PYLGICAGCNCNGHASA---CDPVSGH 703
Query: 110 CV-CKPGVKGSKCNEC 124
C+ C+ +G++C +C
Sbjct: 704 CLSCQHKTEGAQCEKC 719
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 35/112 (31%), Positives = 46/112 (41%)
Query: 42 STEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRE 101
ST + + E+C C QG G C C+ GY + Y + C KC C S
Sbjct: 1037 STGNERAMEVEECACPQGYSGPSCQDCDVGYTRTPGL--Y---LGTCEKCECHGHAS--- 1088
Query: 102 DCEQMTGRCV-CKPGVKGSKCNECLDP---NKKLG-PNGCMPGMEVKPCNGE 148
C+ TG C+ C G +C C+ N K G P C P PC G+
Sbjct: 1089 SCDSETGDCLNCLHNTIGRRCENCISGYYGNPKTGDPQACRPC----PCLGQ 1136
>UNIPROTKB|D4AA94 [details] [associations]
symbol:Megf6 "Multiple epidermal growth factor-like domains
protein 6" species:10116 "Rattus norvegicus" [GO:0005509 "calcium
ion binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 RGD:621188
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
OrthoDB:EOG4CZBF1 IPI:IPI00776570 ProteinModelPortal:D4AA94
Ensembl:ENSRNOT00000055386 Uniprot:D4AA94
Length = 1193
Score = 138 (53.6 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 45/140 (32%), Positives = 59/140 (42%)
Query: 16 CPDNKTLAQGPD-NAGCPST---CGCNKL-GSTED--ACIEDTEQCKCKQGVGGLKC-DR 67
CP KT G D A CP GC ++ + E +C +T C C G G +C D
Sbjct: 655 CPPGKT---GEDCGADCPEGRWGLGCQEICPACEHGASCNPETGTCLCLPGFVGSRCQDT 711
Query: 68 CEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
C G++G GC ++C C+ G C+ TGRC C PG G C D
Sbjct: 712 CSAGWYGT-----------GCQIRCACANDGH----CDPTTGRCSCAPGWTGLSCQRACD 756
Query: 127 PNKKLGPNGCMPGMEVKPCN 146
GP+ C + PCN
Sbjct: 757 SGH-WGPD-C-----IHPCN 769
Score = 135 (52.6 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 33/105 (31%), Positives = 49/105 (46%)
Query: 21 TLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKIS 79
T + G GC C C + + C T +C C G GL C R C+ G+WG
Sbjct: 711 TCSAGWYGTGCQIRCAC----ANDGHCDPTTGRCSCAPGWTGLSCQRACDSGHWG----- 761
Query: 80 SYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
PD C+ C CS G +C+ ++G C+C+ G +G +C +
Sbjct: 762 ---PD---CIHPCNCSA-G--HGNCDAVSGLCLCEAGYEGPRCEQ 797
Score = 126 (49.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 53/196 (27%), Positives = 71/196 (36%)
Query: 8 CLDSWYGC-CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCD 66
C W G C + +G C C C S C T +C+C G GL C+
Sbjct: 915 CPAGWTGDKC--QSSCPRGWFGEACAQRCLCPPNAS----CHHVTGECRCPPGFTGLSCE 968
Query: 67 R-CEPGYWGLSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN-E 123
+ C G +G P GC C C G+ C+ TG C C G G+ C+
Sbjct: 969 QGCPSGRYG--------P---GCEHICKCLNGGT----CDPATGACYCPAGFLGADCSLA 1013
Query: 124 CLDPNKKLGPN-----GCMPGMEVKPCNGEPPVINLQTGVELD--C-----GSGANRE-D 170
C P + GP+ C G P +G +TGV + C G G +
Sbjct: 1014 C--PQGRFGPSCAHVCACRQGAACDPVSGACICSPGKTGVRCEHGCPQDRFGKGCELKCA 1071
Query: 171 CPSDAYCHITQNFARC 186
C + CH T C
Sbjct: 1072 CRNGGLCHATNGSCSC 1087
Score = 117 (46.2 bits), Expect = 0.00027, P = 0.00027
Identities = 40/123 (32%), Positives = 52/123 (42%)
Query: 7 SCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCD 66
SC W G ++ A G A C C C GS C T C C G G C+
Sbjct: 1086 SCPLGWMGPHCEHACPA-GRYGAACLLECFCQNNGS----CEPTTGACLCGPGFYGQACE 1140
Query: 67 RCEPGYWG----LSKISSY-APDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSK 120
CE WG LS S + P GC + C C Q G+ C+ ++G+C+C G G
Sbjct: 1141 HCE---WGCPLPLSCPSGFHGP---GCQRVCECQQ-GA---PCDPVSGQCLCPAGFHGQF 1190
Query: 121 CNE 123
C +
Sbjct: 1191 CEK 1193
Score = 117 (46.2 bits), Expect = 0.00027, P = 0.00027
Identities = 58/209 (27%), Positives = 72/209 (34%)
Query: 6 KSCLDSWYG-CCPDNKTLAQGP--DNAGCPSTCGCNKLGS-TEDAC------IEDTEQCK 55
+SC +YG C G D+ TC GS E AC ++ C
Sbjct: 797 QSCRQGYYGPSCEQKCRCEHGAACDHVSGACTCPAGWRGSFCEHACPAGFFGLDCDSACN 856
Query: 56 CKQGVGGLKCDR------CEPGYWGLSKISSYAPD--IDGC-LKCGCSQFGSVREDCEQM 106
C G CD C G WG P GC L C C G + C+++
Sbjct: 857 CSAGA---PCDAVTGSCICPAGRWGPRCAQKCLPGHYAAGCQLNCSCLH-GGI---CDRL 909
Query: 107 TGRCVCKPGVKGSKC-NECLDPNKKLGPNG-----CMPGMEVKPCNGE---PPVINLQTG 157
TG C+C G G KC + C P G C P GE PP TG
Sbjct: 910 TGHCLCPAGWTGDKCQSSC--PRGWFGEACAQRCLCPPNASCHHVTGECRCPPGF---TG 964
Query: 158 VELDCGSGANREDCPSDAYCHITQNFARC 186
L C G CPS Y ++ +C
Sbjct: 965 --LSCEQG-----CPSGRYGPGCEHICKC 986
>MGI|MGI:2685330 [details] [associations]
symbol:Ntn5 "netrin 5" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001134 PROSITE:PS50189 MGI:MGI:2685330 GO:GO:0005576
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 EMBL:AC167242 HOGENOM:HOG000286017
GeneTree:ENSGT00700000104042 CTD:126147 eggNOG:NOG327968
HOVERGEN:HBG096704 OMA:GGPFLLT OrthoDB:EOG402WS1 EMBL:AK142898
EMBL:BC150901 IPI:IPI00876295 IPI:IPI00923643 RefSeq:NP_001028528.2
UniGene:Mm.291240 ProteinModelPortal:Q3UQ22 SMR:Q3UQ22 PRIDE:Q3UQ22
Ensembl:ENSMUST00000107742 GeneID:243967 KEGG:mmu:243967
InParanoid:Q3UQ22 NextBio:386070 CleanEx:MM_GM484
Genevestigator:Q3UQ22 Uniprot:Q3UQ22
Length = 452
Score = 137 (53.3 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 35/140 (25%), Positives = 52/140 (37%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGY--WGLSKISSYAPDIDG 87
G C C+ + A +C+C+ G C+ C P + W + P
Sbjct: 168 GVRGRCQCHG-HAARCATRAQPPRCRCRHHTTGPGCESCRPSHRDWPWRPATPQHPH--P 224
Query: 88 CLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNG 147
CL C C G+ C Q +G+C CK GV G CN C P + + MP +
Sbjct: 225 CLPCQCHPIGATGGMCNQTSGQCSCKLGVTGLTCNRC-GPGYQQSRSPRMPCQRIPEATT 283
Query: 148 EPPVINLQTGVELDCGSGAN 167
P + + + C N
Sbjct: 284 TPATTPVASRSDPQCQGYCN 303
>FB|FBgn0003137 [details] [associations]
symbol:Ppn "Papilin" species:7227 "Drosophila melanogaster"
[GO:0005604 "basement membrane" evidence=IDA] [GO:0005578
"proteinaceous extracellular matrix" evidence=NAS] [GO:0030198
"extracellular matrix organization" evidence=IMP] [GO:0005201
"extracellular matrix structural constituent" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0004867
"serine-type endopeptidase inhibitor activity" evidence=IEA]
InterPro:IPR002223 InterPro:IPR007110 InterPro:IPR008197
InterPro:IPR010294 InterPro:IPR010909 InterPro:IPR013273
Pfam:PF00014 Pfam:PF05986 Pfam:PF08686 PRINTS:PR00759
PRINTS:PR01857 PROSITE:PS50279 PROSITE:PS50835 PROSITE:PS50900
PROSITE:PS51390 SMART:SM00131 SMART:SM00217 EMBL:AE014297
GO:GO:0007275 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0004867
GO:GO:0008270 InterPro:IPR003598 SMART:SM00408 GO:GO:0030198
Gene3D:4.10.410.10 InterPro:IPR020901 SUPFAM:SSF57362
PROSITE:PS00280 GO:GO:0004222 GO:GO:0005604 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000884 Pfam:PF00090 SMART:SM00209
SUPFAM:SSF82895 PROSITE:PS50092 eggNOG:NOG242665 GO:GO:0005201
HSSP:P12111 SUPFAM:SSF57256 GeneTree:ENSGT00700000104482
EMBL:AF205357 EMBL:AF529179 EMBL:AF529180 EMBL:BT011127
RefSeq:NP_001163760.1 RefSeq:NP_001163761.1 RefSeq:NP_788751.2
RefSeq:NP_788752.2 UniGene:Dm.7007 ProteinModelPortal:Q868Z9
SMR:Q868Z9 IntAct:Q868Z9 MINT:MINT-330923 STRING:Q868Z9
PaxDb:Q868Z9 EnsemblMetazoa:FBtr0301837 GeneID:43872
KEGG:dme:Dmel_CG33103 UCSC:CG33103-RA CTD:43872 FlyBase:FBgn0003137
InParanoid:Q868Z9 OMA:GCCPDNI OrthoDB:EOG4Q5748 PhylomeDB:Q868Z9
GenomeRNAi:43872 NextBio:836259 Bgee:Q868Z9 GermOnline:CG33103
Uniprot:Q868Z9
Length = 2898
Score = 142 (55.0 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 60/210 (28%), Positives = 81/210 (38%)
Query: 6 KSCLDSWYGCCPDNKTLAQGPDNAGC----PSTCGCNKLGSTEDACIEDTEQCKCKQGVG 61
KSC S +GCCPD +T A+GPD GC P GC +E+ C D + G
Sbjct: 1368 KSCSFSEFGCCPDAETSAKGPDFEGCGLASPVAKGC---AESENGCCPDGQTPA--SGPN 1422
Query: 62 GLKCDRCEPGYWGL---SKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
G C C +G S+ ++ P+ +GC C +QFG ++ G P +G
Sbjct: 1423 GEGCSGCTRERFGCCPDSQTPAHGPNKEGC--CLDTQFGCCPDNILAARG-----PNNEG 1475
Query: 119 SKCNE----CLDPNKKL--GPN-----------GCMPGMEVKPCNGEP----PVINLQTG 157
+C+ C NK G N GC P ++ G P Q G
Sbjct: 1476 CECHYTPYGCCPDNKSAATGYNQEGCACETTQYGCCPD-KITAAKGPKHEGCPCETTQFG 1534
Query: 158 VELDCGSGANREDCPSDAYCHITQNFARCC 187
C G P CH TQ +CC
Sbjct: 1535 C---CPDGLTFAKGPHHHGCHCTQTEFKCC 1561
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 40/134 (29%), Positives = 53/134 (39%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
CLD+ +GCCPDN A+GP+N GC C G C D + G C+
Sbjct: 1453 CLDTQFGCCPDNILAARGPNNEGCE--CHYTPYG-----CCPDNKSAATGYNQEGCACET 1505
Query: 68 CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE---- 123
+ G ++ P +GC C +QFG + G P G C +
Sbjct: 1506 TQYGCCPDKITAAKGPKHEGC-PCETTQFGCCPDGLTFAKG-----PHHHGCHCTQTEFK 1559
Query: 124 CLDPNKK--LGPNG 135
C D K GPNG
Sbjct: 1560 CCDDEKTPAKGPNG 1573
Score = 121 (47.7 bits), Expect = 0.00022, P = 0.00022
Identities = 54/198 (27%), Positives = 74/198 (37%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
C ++ +GCCPD T A G ++ GCP T +TE+ E T + +G G
Sbjct: 1306 CAETLFGCCPDKFTAADGENDEGCPETTTVPPTTTTEETQPETTTEI---EG-SGQDSTT 1361
Query: 68 CEPGYWGLSKISSYA--PDIDGCLKC----GCSQFGSVREDCEQMTGRCVCK----P--G 115
EP S + PD + K GC V + C + C C P G
Sbjct: 1362 SEPDTKKSCSFSEFGCCPDAETSAKGPDFEGCGLASPVAKGCAESENGC-CPDGQTPASG 1420
Query: 116 VKGSKCNECLDPNKKLGPNGCMPGMEVKPCNG---EPPVINLQTGVELD---CGSGANRE 169
G C+ C ++ G C P + P +G E ++ Q G D G N E
Sbjct: 1421 PNGEGCSGCT--RERFG---CCPDSQT-PAHGPNKEGCCLDTQFGCCPDNILAARGPNNE 1474
Query: 170 DCPSDAYCHITQNFARCC 187
C CH T CC
Sbjct: 1475 GCE----CHYTPY--GCC 1486
>ZFIN|ZDB-GENE-090312-12 [details] [associations]
symbol:megf6a "multiple EGF-like-domains 6a"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR011489 InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-090312-12 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
PROSITE:PS50027 InterPro:IPR009030 SUPFAM:SSF57184
InterPro:IPR026823 Pfam:PF12662 Pfam:PF12661
GeneTree:ENSGT00690000101691 EMBL:CR354562 EMBL:CT027543
EMBL:CT027552 IPI:IPI00901902 ProteinModelPortal:E7FFP9
Ensembl:ENSDART00000112424 Bgee:E7FFP9 Uniprot:E7FFP9
Length = 1513
Score = 139 (54.0 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 60/203 (29%), Positives = 75/203 (36%)
Query: 6 KSCLDSWYG-CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIE---------D-TEQC 54
K C + W+G C + G C C LG T D C E D +E C
Sbjct: 1283 KGCAEGWFGENCDQRCNCSNGGVCDALTGHCSCT-LGWTGDTCEEVCPRGRYGSDCSEVC 1341
Query: 55 KCKQGVGGLKCDR------CEPGYWGLSKISSYAPDIDG--C-LKCGCSQFGSVREDCEQ 105
CK CDR C PG++G + G C L C C C+
Sbjct: 1342 DCKNNS---TCDRVTGVCLCSPGFYGHLCQHACPVGFHGHRCQLLCDCG----ANAPCDP 1394
Query: 106 MTGRCVCKPGVKGSKCN-ECLDPNKKLGPNG--CMPGMEVK---PC---NGEPPVINLQT 156
TGRC+C G +G +C EC +LG G C+ + PC NG +T
Sbjct: 1395 ETGRCLCPAGYQGLRCEREC-----ELGTFGADCVHRCDCDGDTPCDPINGRCLCAPGKT 1449
Query: 157 GVELDCGSGANR--EDCPSDAYC 177
G D G G NR DC C
Sbjct: 1450 GSRCDIGCGVNRFGPDCSQRCEC 1472
Score = 131 (51.2 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 48/169 (28%), Positives = 66/169 (39%)
Query: 20 KTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKI 78
K G C C C G++ C T QC C G+ G C+R C+ G +G++
Sbjct: 1110 KVCLPGSYGKRCAHRCQCPH-GTS---CNHVTGQCGCPAGLTGSGCERMCQSGTFGVN-- 1163
Query: 79 SSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN-ECLDPNKKLGPN-- 134
C + C CS+ + C +TG C C PG GSKC EC + GPN
Sbjct: 1164 ---------CNQVCQCSELNQL---CHPVTGVCYCAPGYYGSKCETEC--EAGRYGPNCE 1209
Query: 135 ---GCMPGMEVKPCNGE---PPVINLQTGVELDCGSGANREDCPSDAYC 177
C+ K G PP + + C G +DC + C
Sbjct: 1210 QECQCLNNGVCKSSTGTCSCPPGF-IGPNCNITCPLGRYGQDCAGVSLC 1257
Score = 129 (50.5 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 35/113 (30%), Positives = 52/113 (46%)
Query: 47 CIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQ 105
C +T +C C G GL+C+R CE G +G + +C C G C+
Sbjct: 1392 CDPETGRCLCPAGYQGLRCERECELGTFGADCVH----------RCDCD--GDT--PCDP 1437
Query: 106 MTGRCVCKPGVKGSKCNECLDPNKKLGPN-----GCMPGMEVKPCNGEPPVIN 153
+ GRC+C PG GS+C+ N+ GP+ C+ G + P NG +N
Sbjct: 1438 INGRCLCAPGKTGSRCDIGCGVNR-FGPDCSQRCECLNGGQCDPRNGRCTCLN 1489
Score = 129 (50.5 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 55/186 (29%), Positives = 73/186 (39%)
Query: 8 CLDSWYGC-CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKC- 65
C D W G C N+T +G C TC C G T C + +C+C GV G C
Sbjct: 492 CPDGWTGILC--NQTCPEGTFGKNCSFTCKCRN-GGT---CDPISGKCRCPPGVNGDLCQ 545
Query: 66 DRCEPGYWGLSKISSYAPDIDGCLKCG-CSQ-FGSVREDCEQMTGR-C--VCKPGVKGSK 120
D C G +G + C G C + +G+ D + GR C C GS
Sbjct: 546 DGCPKGMYG-----KHCNKKCNCANNGRCHRTYGACLCD-PGLYGRFCHLPCPKWSYGSG 599
Query: 121 CN-EC-------LDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCP 172
C+ EC L+ +++ G C PG + K CN E G L C CP
Sbjct: 600 CSSECQCVQQNTLECHRRHGTCVCKPGYQGKTCNRECDSGFYGPGCRLKC-------QCP 652
Query: 173 SDAYCH 178
+ CH
Sbjct: 653 AGVSCH 658
Score = 123 (48.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 33/95 (34%), Positives = 42/95 (44%)
Query: 36 GCNKLGSTEDA-CIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGCLK-CG 92
GC + + A C T +C C G G C++ CE G WGL GC + C
Sbjct: 689 GCTQFCDCKGAPCNSVTGKCHCPAGQTGQHCEKECEEGRWGL-----------GCAESCP 737
Query: 93 CSQFGSVREDCEQMTGRCVCKPGVKGSKC-NECLD 126
G V C++ G CVC PG G+ C N C D
Sbjct: 738 SCDNGGV---CDRQNGTCVCSPGFMGNLCQNVCPD 769
Score = 122 (48.0 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 47/171 (27%), Positives = 62/171 (36%)
Query: 20 KTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKI 78
K +G GC +C G C C C G G C C G++GLS +
Sbjct: 721 KECEEGRWGLGCAESCPSCDNGGV---CDRQNGTCVCSPGFMGNLCQNVCPDGHFGLSCL 777
Query: 79 SSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP 138
L+C C G C +TG CVCK G G C + + GPN C
Sbjct: 778 ----------LRCSCQNEGK----CHHVTGLCVCKDGWMGPNCAKACVAGR-WGPN-CAN 821
Query: 139 GMEVKPCNGE-PPVINLQTGVELDCGSGANRED--CPSDAYCHITQNFARC 186
+ + G PVI L + G R D CP + Q+ +C
Sbjct: 822 QCDCRSSVGSCDPVIGL---CHCEAGYMGPRCDQKCPQGFFGQSCQHRCQC 869
Score = 114 (45.2 bits), Expect = 0.00085, P = 0.00085
Identities = 48/169 (28%), Positives = 59/169 (34%)
Query: 8 CLDSWYGC-CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCD 66
C W G C T QG GC C C+ AC T C C G G C+
Sbjct: 1056 CPAGWTGTHCETACT--QGFYGPGCKERCRCDH----NAACHHITGTCLCPAGWRGTHCE 1109
Query: 67 R-CEPGYWGLSKISS-YAPDIDGCL----KCGCSQFGSVREDCEQMTGRCVCKPGVKGSK 120
+ C PG +G P C +CGC G CE+M C+ G G
Sbjct: 1110 KVCLPGSYGKRCAHRCQCPHGTSCNHVTGQCGCPA-GLTGSGCERM-----CQSGTFGVN 1163
Query: 121 CNE---CLDPNKKLGP-NG---CMPGMEVKPCNGEPPVINLQTGVELDC 162
CN+ C + N+ P G C PG C E E +C
Sbjct: 1164 CNQVCQCSELNQLCHPVTGVCYCAPGYYGSKCETECEAGRYGPNCEQEC 1212
>UNIPROTKB|E1BPS6 [details] [associations]
symbol:MEGF8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR015915
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:GHSMVFH EMBL:DAAA02047205
EMBL:DAAA02047206 EMBL:DAAA02047207 EMBL:DAAA02047208
EMBL:DAAA02047209 EMBL:DAAA02047210 IPI:IPI00999849
Ensembl:ENSBTAT00000043858 Uniprot:E1BPS6
Length = 2772
Score = 141 (54.7 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 48/168 (28%), Positives = 66/168 (39%)
Query: 21 TLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ-C-KCKQGVGGLKCDRCEPGYWGLSKI 78
T A GP C CGCN C + C +C+ G C+RC PG +G +
Sbjct: 1132 TPAPGPPAPRCSRDCGCN----FHSHCHKRGPGFCDECQDWTWGEHCERCRPGSFGNATG 1187
Query: 79 SSYAPDIDGCLKCGCSQFGSVRED-CEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCM 137
S GC C C+ G R C+ ++G C C+ +G+ C C P P
Sbjct: 1188 SG------GCRPCQCNGHGDPRRGHCDNLSGLCFCQDHTEGAHCQLC-SPGYYGDPRA-- 1238
Query: 138 PGMEVKPCNGEPPVINLQT--------GVELDCGSGANREDCPSDAYC 177
G + C G + N+ + G L G GA R P +YC
Sbjct: 1239 GGSCFRECGGRALLTNVSSVALGSRRFGGLLPAGGGAARAG-PGLSYC 1285
>UNIPROTKB|F1RGK2 [details] [associations]
symbol:MEGF8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002165 InterPro:IPR015915
InterPro:IPR018097 Pfam:PF01437 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:GHSMVFH EMBL:FP102452
Ensembl:ENSSSCT00000003355 Uniprot:F1RGK2
Length = 2789
Score = 141 (54.7 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 48/168 (28%), Positives = 66/168 (39%)
Query: 21 TLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ-C-KCKQGVGGLKCDRCEPGYWGLSKI 78
T A GP C CGCN C + C +C+ G C+RC PG +G +
Sbjct: 1149 TPAPGPPAPRCSRDCGCN----FHSHCRKRGPGFCDECQDWTWGEHCERCRPGSFGNATG 1204
Query: 79 SSYAPDIDGCLKCGCSQFGSVRED-CEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCM 137
S GC C C+ G R C+ ++G C C+ +G+ C C P P
Sbjct: 1205 SG------GCRPCQCNGHGDPRRGHCDNLSGLCFCQDHTEGAHCQLC-SPGYYGDPRA-- 1255
Query: 138 PGMEVKPCNGEPPVINLQT--------GVELDCGSGANREDCPSDAYC 177
G + C G + N+ + G L G GA R P +YC
Sbjct: 1256 GGSCFRECGGRALLTNVSSVALGSRRVGGLLPAGGGAARAG-PGLSYC 1302
>RGD|621188 [details] [associations]
symbol:Megf6 "multiple EGF-like-domains 6" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011489 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51041
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 RGD:621188
GO:GO:0005576 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 InterPro:IPR026823 Pfam:PF12662
CTD:1953 HOGENOM:HOG000097840 HOVERGEN:HBG079790 EMBL:AB011532
IPI:IPI00207575 PIR:T13954 RefSeq:NP_075244.1 UniGene:Rn.195598
ProteinModelPortal:O88281 PRIDE:O88281 GeneID:65049 KEGG:rno:65049
UCSC:RGD:621188 InParanoid:O88281 NextBio:613892
Genevestigator:O88281 Uniprot:O88281
Length = 1574
Score = 138 (53.6 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 45/140 (32%), Positives = 59/140 (42%)
Query: 16 CPDNKTLAQGPD-NAGCPST---CGCNKL-GSTED--ACIEDTEQCKCKQGVGGLKC-DR 67
CP KT G D A CP GC ++ + E +C +T C C G G +C D
Sbjct: 764 CPPGKT---GEDCGADCPEGRWGLGCQEICPACEHGASCNPETGTCLCLPGFVGSRCQDT 820
Query: 68 CEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
C G++G GC ++C C+ G C+ TGRC C PG G C D
Sbjct: 821 CSAGWYGT-----------GCQIRCACANDGH----CDPTTGRCSCAPGWTGLSCQRACD 865
Query: 127 PNKKLGPNGCMPGMEVKPCN 146
GP+ C + PCN
Sbjct: 866 SGH-WGPD-C-----IHPCN 878
Score = 135 (52.6 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 33/105 (31%), Positives = 49/105 (46%)
Query: 21 TLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKIS 79
T + G GC C C + + C T +C C G GL C R C+ G+WG
Sbjct: 820 TCSAGWYGTGCQIRCAC----ANDGHCDPTTGRCSCAPGWTGLSCQRACDSGHWG----- 870
Query: 80 SYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
PD C+ C CS G +C+ ++G C+C+ G +G +C +
Sbjct: 871 ---PD---CIHPCNCSA-G--HGNCDAVSGLCLCEAGYEGPRCEQ 906
Score = 116 (45.9 bits), Expect = 0.00050, P = 0.00050
Identities = 36/119 (30%), Positives = 47/119 (39%)
Query: 7 SCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCD 66
+C + W G +N+ L G AGC C C G C T C C G G KC
Sbjct: 1066 TCPEGWTGLACENECLP-GHYAAGCQLNCSCLHGG----ICDRLTGHCLCPAGWTGDKCQ 1120
Query: 67 R-CEPGYWGLSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
C G +G+ C + C C + S C +TG C C PG +G C +
Sbjct: 1121 SSCVSGTFGVH-----------CEEHCACRKGAS----CHHVTGACFCPPGWRGPHCEQ 1164
Score = 116 (45.9 bits), Expect = 0.00050, P = 0.00050
Identities = 45/149 (30%), Positives = 58/149 (38%)
Query: 53 QCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRC 110
QC C +G GL C+ C PG+ YA GC L C C G + C+++TG C
Sbjct: 1064 QCTCPEGWTGLACENECLPGH--------YAA---GCQLNCSCLH-GGI---CDRLTGHC 1108
Query: 111 VCKPGVKGSKC-NECLDPNKKLGPN---GCMPGMEVKPCNGE---PPVINLQTGVELDCG 163
+C G G KC + C+ + C G G PP E C
Sbjct: 1109 LCPAGWTGDKCQSSCVSGTFGVHCEEHCACRKGASCHHVTGACFCPPGWR-GPHCEQACP 1167
Query: 164 SG------ANREDCPSDAYCHITQNFARC 186
G A R CP++A CH RC
Sbjct: 1168 RGWFGEACAQRCLCPTNASCHHVTGECRC 1196
Score = 116 (45.9 bits), Expect = 0.00050, P = 0.00050
Identities = 46/164 (28%), Positives = 61/164 (37%)
Query: 30 GCPSTC---GCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAP 83
GCP GC + + C C C G G C+ C G +G + +
Sbjct: 1338 GCPQDRFGKGCELKCACRNGGLCHATNGSCSCPLGWMGPHCEHACPAGRYGAACL----- 1392
Query: 84 DIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC-NECLDPNKKLGPN-----GCM 137
L+C C GS CE TG C+C PG G C + C P+ GP C
Sbjct: 1393 -----LECFCQNNGS----CEPTTGACLCGPGFYGQACEHSC--PSGFHGPGCQRVCECQ 1441
Query: 138 PGMEVKPCNGE---PPVINLQTGVELDCGSGANREDCPSDAYCH 178
G P +G+ P + Q E C SG+ + C CH
Sbjct: 1442 QGAPCDPVSGQCLCPAGFHGQF-CEKGCESGSFGDGCLQQCNCH 1484
Score = 115 (45.5 bits), Expect = 0.00067, P = 0.00067
Identities = 44/147 (29%), Positives = 61/147 (41%)
Query: 5 LKSCLDSWYGCC-PDNKTLAQGPDNAG--CPSTC-------GCNKLGSTEDA--CIEDTE 52
L C G C P GP G C +C GC ++ + C +
Sbjct: 1392 LLECFCQNNGSCEPTTGACLCGPGFYGQACEHSCPSGFHGPGCQRVCECQQGAPCDPVSG 1451
Query: 53 QCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRC 110
QC C G G C++ CE G +G DGCL+ C C G C+ ++G C
Sbjct: 1452 QCLCPAGFHGQFCEKGCESGSFG-----------DGCLQQCNCHT-GV---PCDPISGLC 1496
Query: 111 VCKPGVKGSKCNECLDPNK-KLGPNGC 136
+C PG G+ C+ LD + + GP GC
Sbjct: 1497 LCPPGRTGAACD--LDCRRGRFGP-GC 1520
Score = 115 (45.5 bits), Expect = 0.00067, P = 0.00067
Identities = 51/197 (25%), Positives = 68/197 (34%)
Query: 6 KSCLDSWYG-CCPDNKTLAQGP--DNAGCPSTCGCNKLGS-TEDAC------IEDTEQCK 55
+SC +YG C G D+ TC GS E AC ++ C
Sbjct: 906 QSCRQGYYGPSCEQKCRCEHGAACDHVSGACTCPAGWRGSFCEHACPAGFFGLDCDSACN 965
Query: 56 CKQGVGGLKCDR------CEPGYWGLSKISSYAPDIDGCLKCG--CSQFGSVREDCEQMT 107
C G CD C G WG + + P + L C C+ F C+ +T
Sbjct: 966 CSAGA---PCDAVTGSCICPAGRWG-PRCAQSCPPLTFGLNCSQICTCFNGA--SCDSVT 1019
Query: 108 GRCVCKPGVKGSKCNECLDPNKKLGPNG-----CMPGMEVKPCNGEPPVINLQTGV--EL 160
G+C C PG G C + P G N C G P G+ TG+ E
Sbjct: 1020 GQCHCAPGWMGPTCLQACPPGL-YGKNCQHSCLCRNGGRCDPILGQCTCPEGWTGLACEN 1078
Query: 161 DCGSGANREDCPSDAYC 177
+C G C + C
Sbjct: 1079 ECLPGHYAAGCQLNCSC 1095
Score = 114 (45.2 bits), Expect = 0.00089, P = 0.00089
Identities = 45/180 (25%), Positives = 63/180 (35%)
Query: 8 CLDSWYGC-CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCD 66
C W G C + +G C C C T +C T +C+C G GL C+
Sbjct: 1153 CPPGWRGPHC--EQACPRGWFGEACAQRCLC----PTNASCHHVTGECRCPPGFTGLSCE 1206
Query: 67 R-CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC-NEC 124
+ C+PG +G D + +C + C+ +G C C G G+ C C
Sbjct: 1207 QACQPGTFG--------KDCEHLCQCPGETWA-----CDPASGVCTCAAGYHGTGCLQRC 1253
Query: 125 LDPNKKLGPN-----GCMPGMEVKPCNGEP--PVINLQTGVELDCGSGANREDCPSDAYC 177
P+ + GP C+ G P G P L L C G C C
Sbjct: 1254 --PSGRYGPGCEHICKCLNGGTCDPATGACYCPAGFLGADCSLACPQGRFGPSCAHVCAC 1311
>UNIPROTKB|O88281 [details] [associations]
symbol:Megf6 "Multiple epidermal growth factor-like domains
protein 6" species:10116 "Rattus norvegicus" [GO:0005509 "calcium
ion binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR011489 InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:621188 GO:GO:0005576 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
InterPro:IPR026823 Pfam:PF12662 CTD:1953 HOGENOM:HOG000097840
HOVERGEN:HBG079790 EMBL:AB011532 IPI:IPI00207575 PIR:T13954
RefSeq:NP_075244.1 UniGene:Rn.195598 ProteinModelPortal:O88281
PRIDE:O88281 GeneID:65049 KEGG:rno:65049 UCSC:RGD:621188
InParanoid:O88281 NextBio:613892 Genevestigator:O88281
Uniprot:O88281
Length = 1574
Score = 138 (53.6 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 45/140 (32%), Positives = 59/140 (42%)
Query: 16 CPDNKTLAQGPD-NAGCPST---CGCNKL-GSTED--ACIEDTEQCKCKQGVGGLKC-DR 67
CP KT G D A CP GC ++ + E +C +T C C G G +C D
Sbjct: 764 CPPGKT---GEDCGADCPEGRWGLGCQEICPACEHGASCNPETGTCLCLPGFVGSRCQDT 820
Query: 68 CEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
C G++G GC ++C C+ G C+ TGRC C PG G C D
Sbjct: 821 CSAGWYGT-----------GCQIRCACANDGH----CDPTTGRCSCAPGWTGLSCQRACD 865
Query: 127 PNKKLGPNGCMPGMEVKPCN 146
GP+ C + PCN
Sbjct: 866 SGH-WGPD-C-----IHPCN 878
Score = 135 (52.6 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 33/105 (31%), Positives = 49/105 (46%)
Query: 21 TLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKIS 79
T + G GC C C + + C T +C C G GL C R C+ G+WG
Sbjct: 820 TCSAGWYGTGCQIRCAC----ANDGHCDPTTGRCSCAPGWTGLSCQRACDSGHWG----- 870
Query: 80 SYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
PD C+ C CS G +C+ ++G C+C+ G +G +C +
Sbjct: 871 ---PD---CIHPCNCSA-G--HGNCDAVSGLCLCEAGYEGPRCEQ 906
Score = 116 (45.9 bits), Expect = 0.00050, P = 0.00050
Identities = 36/119 (30%), Positives = 47/119 (39%)
Query: 7 SCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCD 66
+C + W G +N+ L G AGC C C G C T C C G G KC
Sbjct: 1066 TCPEGWTGLACENECLP-GHYAAGCQLNCSCLHGG----ICDRLTGHCLCPAGWTGDKCQ 1120
Query: 67 R-CEPGYWGLSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
C G +G+ C + C C + S C +TG C C PG +G C +
Sbjct: 1121 SSCVSGTFGVH-----------CEEHCACRKGAS----CHHVTGACFCPPGWRGPHCEQ 1164
Score = 116 (45.9 bits), Expect = 0.00050, P = 0.00050
Identities = 45/149 (30%), Positives = 58/149 (38%)
Query: 53 QCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRC 110
QC C +G GL C+ C PG+ YA GC L C C G + C+++TG C
Sbjct: 1064 QCTCPEGWTGLACENECLPGH--------YAA---GCQLNCSCLH-GGI---CDRLTGHC 1108
Query: 111 VCKPGVKGSKC-NECLDPNKKLGPN---GCMPGMEVKPCNGE---PPVINLQTGVELDCG 163
+C G G KC + C+ + C G G PP E C
Sbjct: 1109 LCPAGWTGDKCQSSCVSGTFGVHCEEHCACRKGASCHHVTGACFCPPGWR-GPHCEQACP 1167
Query: 164 SG------ANREDCPSDAYCHITQNFARC 186
G A R CP++A CH RC
Sbjct: 1168 RGWFGEACAQRCLCPTNASCHHVTGECRC 1196
Score = 116 (45.9 bits), Expect = 0.00050, P = 0.00050
Identities = 46/164 (28%), Positives = 61/164 (37%)
Query: 30 GCPSTC---GCNKLGSTEDA--CIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAP 83
GCP GC + + C C C G G C+ C G +G + +
Sbjct: 1338 GCPQDRFGKGCELKCACRNGGLCHATNGSCSCPLGWMGPHCEHACPAGRYGAACL----- 1392
Query: 84 DIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC-NECLDPNKKLGPN-----GCM 137
L+C C GS CE TG C+C PG G C + C P+ GP C
Sbjct: 1393 -----LECFCQNNGS----CEPTTGACLCGPGFYGQACEHSC--PSGFHGPGCQRVCECQ 1441
Query: 138 PGMEVKPCNGE---PPVINLQTGVELDCGSGANREDCPSDAYCH 178
G P +G+ P + Q E C SG+ + C CH
Sbjct: 1442 QGAPCDPVSGQCLCPAGFHGQF-CEKGCESGSFGDGCLQQCNCH 1484
Score = 115 (45.5 bits), Expect = 0.00067, P = 0.00067
Identities = 44/147 (29%), Positives = 61/147 (41%)
Query: 5 LKSCLDSWYGCC-PDNKTLAQGPDNAG--CPSTC-------GCNKLGSTEDA--CIEDTE 52
L C G C P GP G C +C GC ++ + C +
Sbjct: 1392 LLECFCQNNGSCEPTTGACLCGPGFYGQACEHSCPSGFHGPGCQRVCECQQGAPCDPVSG 1451
Query: 53 QCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRC 110
QC C G G C++ CE G +G DGCL+ C C G C+ ++G C
Sbjct: 1452 QCLCPAGFHGQFCEKGCESGSFG-----------DGCLQQCNCHT-GV---PCDPISGLC 1496
Query: 111 VCKPGVKGSKCNECLDPNK-KLGPNGC 136
+C PG G+ C+ LD + + GP GC
Sbjct: 1497 LCPPGRTGAACD--LDCRRGRFGP-GC 1520
Score = 115 (45.5 bits), Expect = 0.00067, P = 0.00067
Identities = 51/197 (25%), Positives = 68/197 (34%)
Query: 6 KSCLDSWYG-CCPDNKTLAQGP--DNAGCPSTCGCNKLGS-TEDAC------IEDTEQCK 55
+SC +YG C G D+ TC GS E AC ++ C
Sbjct: 906 QSCRQGYYGPSCEQKCRCEHGAACDHVSGACTCPAGWRGSFCEHACPAGFFGLDCDSACN 965
Query: 56 CKQGVGGLKCDR------CEPGYWGLSKISSYAPDIDGCLKCG--CSQFGSVREDCEQMT 107
C G CD C G WG + + P + L C C+ F C+ +T
Sbjct: 966 CSAGA---PCDAVTGSCICPAGRWG-PRCAQSCPPLTFGLNCSQICTCFNGA--SCDSVT 1019
Query: 108 GRCVCKPGVKGSKCNECLDPNKKLGPNG-----CMPGMEVKPCNGEPPVINLQTGV--EL 160
G+C C PG G C + P G N C G P G+ TG+ E
Sbjct: 1020 GQCHCAPGWMGPTCLQACPPGL-YGKNCQHSCLCRNGGRCDPILGQCTCPEGWTGLACEN 1078
Query: 161 DCGSGANREDCPSDAYC 177
+C G C + C
Sbjct: 1079 ECLPGHYAAGCQLNCSC 1095
Score = 114 (45.2 bits), Expect = 0.00089, P = 0.00089
Identities = 45/180 (25%), Positives = 63/180 (35%)
Query: 8 CLDSWYGC-CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCD 66
C W G C + +G C C C T +C T +C+C G GL C+
Sbjct: 1153 CPPGWRGPHC--EQACPRGWFGEACAQRCLC----PTNASCHHVTGECRCPPGFTGLSCE 1206
Query: 67 R-CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC-NEC 124
+ C+PG +G D + +C + C+ +G C C G G+ C C
Sbjct: 1207 QACQPGTFG--------KDCEHLCQCPGETWA-----CDPASGVCTCAAGYHGTGCLQRC 1253
Query: 125 LDPNKKLGPN-----GCMPGMEVKPCNGEP--PVINLQTGVELDCGSGANREDCPSDAYC 177
P+ + GP C+ G P G P L L C G C C
Sbjct: 1254 --PSGRYGPGCEHICKCLNGGTCDPATGACYCPAGFLGADCSLACPQGRFGPSCAHVCAC 1311
>ZFIN|ZDB-GENE-050208-554 [details] [associations]
symbol:stab1 "stabilin 1" species:7955 "Danio
rerio" [GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0005540
"hyaluronic acid binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR000538 InterPro:IPR000742
InterPro:IPR001304 Pfam:PF00193 PRINTS:PR01265 PROSITE:PS01241
PROSITE:PS50026 PROSITE:PS50963 SMART:SM00034 SMART:SM00181
SMART:SM00445 Pfam:PF02469 InterPro:IPR000782
ZFIN:ZDB-GENE-050208-554 GO:GO:0030246 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 PROSITE:PS01248 Gene3D:2.30.180.10 SMART:SM00554
SUPFAM:SSF82153 PROSITE:PS50213 GO:GO:0005540 InterPro:IPR024731
Pfam:PF12947 Gene3D:2.40.155.10 InterPro:IPR023413
GeneTree:ENSGT00690000101914 EMBL:BX649457 EMBL:BX908725
EMBL:AB235839 IPI:IPI00483854 RefSeq:NP_001182543.1
UniGene:Dr.55459 Ensembl:ENSDART00000092050 GeneID:570626
KEGG:dre:570626 CTD:570626 NextBio:20890219 Uniprot:E0CZJ3
Length = 2553
Score = 140 (54.3 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 52/187 (27%), Positives = 76/187 (40%)
Query: 5 LKSCLDSW--YGCCPDNKTLAQGPDNAGCPSTCG--CNKLGSTEDACIEDTEQCKCKQGV 60
L CL + + CCP G D CP T C+ G ED + T +C C +G
Sbjct: 1306 LMDCLRTTKDHSCCPGYF----GHDCGKCPGTLDNWCSNNGQCEDG-LHGTGKCLCNEGF 1360
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSK 120
G C+ CEPG +G S +C C + G + E G+C+C G KG K
Sbjct: 1361 HGTACEMCEPGRYGKDCKS----------ECHC-EHGKCLDGLEG-NGQCICFKGWKGVK 1408
Query: 121 CNECLDPNKKLGPNGCMPGME-VKPCNGEPPVINLQTGVELDCGSGANRED---CPSD-A 175
C+ + + G C + +G PP + G + G+G + E+ C D
Sbjct: 1409 CSVVVVDDACGGV--CDVNANCISGDSGTPPTCSCTAGYK---GNGTSCEEINPCAEDNG 1463
Query: 176 YCHITQN 182
C + N
Sbjct: 1464 GCSVNAN 1470
>UNIPROTKB|E2RM39 [details] [associations]
symbol:MEGF8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002165 InterPro:IPR015915
InterPro:IPR018097 Pfam:PF01437 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:GHSMVFH EMBL:AAEX03000913
EMBL:AAEX03000914 Ensembl:ENSCAFT00000007776 Uniprot:E2RM39
Length = 2787
Score = 140 (54.3 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 51/181 (28%), Positives = 69/181 (38%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ-C-KCKQGVGGLKC 65
C W P T A GP C CGCN C + C +C+ G C
Sbjct: 1136 CDLGWTSDLPP-PTPAPGPPAPRCSRDCGCN----FHSHCRKRGPGFCDECQDWTWGEHC 1190
Query: 66 DRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED-CEQMTGRCVCKPGVKGSKCNEC 124
+RC PG +G + S GC C C+ G R C+ ++G C C+ +G+ C C
Sbjct: 1191 ERCRPGSFGNATGSG------GCRPCQCNGHGDPRRGHCDNLSGLCFCQDHTEGAHCQFC 1244
Query: 125 LDPNKKLGPNGCMPGMEVKPCNGEPPVINLQT--------GVELDCGSGANREDCPSDAY 176
P P G + C G + N+ + G L G GA R P +Y
Sbjct: 1245 -SPGYYGDPRA--GGSCFRECGGRALLTNVSSVALGSRRVGGLLPPGGGAARAG-PGLSY 1300
Query: 177 C 177
C
Sbjct: 1301 C 1301
>ZFIN|ZDB-GENE-990415-169 [details] [associations]
symbol:ntn1a "netrin 1a" species:7955 "Danio rerio"
[GO:0033564 "anterior/posterior axon guidance" evidence=IMP]
[GO:0048665 "neuron fate specification" evidence=IMP] [GO:0016525
"negative regulation of angiogenesis" evidence=IMP] [GO:0001569
"patterning of blood vessels" evidence=IMP] [GO:0005576
"extracellular region" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IMP] [GO:0016358 "dendrite development" evidence=IGI]
InterPro:IPR001134 PROSITE:PS50189 ZFIN:ZDB-GENE-990415-169
GO:GO:0005576 GO:GO:0016358 GO:GO:0001569 GO:GO:0016525
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0048665
InterPro:IPR018933 Pfam:PF01759 HSSP:P02468 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 HOVERGEN:HBG006464 KO:K06843
HOGENOM:HOG000286017 OMA:NCHTCDA GO:GO:0033564 EMBL:BX255899
EMBL:AF002717 EMBL:CU638812 IPI:IPI00500311 RefSeq:NP_571104.1
UniGene:Dr.545 STRING:O42140 Ensembl:ENSDART00000027806
Ensembl:ENSDART00000148565 GeneID:30227 KEGG:dre:30227 CTD:30227
InParanoid:O42140 NextBio:20806684 Uniprot:O42140
Length = 603
Score = 137 (53.3 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 26/70 (37%), Positives = 34/70 (48%)
Query: 56 CKQGVGGLKCDRCEPGYW-GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKP 114
C+ G C C+ GY+ +SK S+ C C C G+ + C Q TG+C CK
Sbjct: 370 CRHNTAGRHCHYCKEGYYRDMSKPISHRK---ACKACDCHPVGAAGKTCNQTTGQCPCKD 426
Query: 115 GVKGSKCNEC 124
GV G CN C
Sbjct: 427 GVTGITCNRC 436
Score = 113 (44.8 bits), Expect = 0.00037, P = 0.00037
Identities = 37/154 (24%), Positives = 61/154 (39%)
Query: 35 CGCNKLGSTEDACIEDTEQ---CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKC 91
C CN S C++D + C+CK G +CDRC+P ++ + A + + C+ C
Sbjct: 284 CKCNGHASR---CVKDRDGNLVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVAC 340
Query: 92 GCSQFGS-VREDCE--QMTGR-----CV-CKPGVKGSKCNECL-----DPNKKLGPNGCM 137
C+ R + E +++GR C+ C+ G C+ C D +K +
Sbjct: 341 NCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMSKPISHRKAC 400
Query: 138 PGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
+ P N TG + C G C
Sbjct: 401 KACDCHPVGAAGKTCNQTTG-QCPCKDGVTGITC 433
>ZFIN|ZDB-GENE-090730-1 [details] [associations]
symbol:megf8 "multiple EGF-like-domains 8"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0061371 "determination of heart
left/right asymmetry" evidence=IMP] [GO:0071907 "determination of
digestive tract left/right asymmetry" evidence=IMP] [GO:0007368
"determination of left/right symmetry" evidence=IMP] [GO:1900164
"nodal signaling pathway involved in determination of lateral
mesoderm left/right asymmetry" evidence=IMP] [GO:0042074 "cell
migration involved in gastrulation" evidence=IMP] [GO:0055113
"epiboly involved in gastrulation with mouth forming second"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR006652 InterPro:IPR015915
InterPro:IPR018097 Pfam:PF01344 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-090730-1 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.120.10.80 GO:GO:0007368 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0042074 GO:GO:0055113
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 InterPro:IPR024731 Pfam:PF12947
EMBL:BX571757 EMBL:BX571761 IPI:IPI00933480
Ensembl:ENSDART00000110951 Uniprot:F1R219
Length = 2774
Score = 139 (54.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 48/166 (28%), Positives = 63/166 (37%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGV 60
SG L C S G D TL C CGCN ST +QC+
Sbjct: 1117 SGSPLFECECS-LGWTSDPATLVLS--GVECDVDCGCN-FHSTCITAPGICDQCQGLDWT 1172
Query: 61 GGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED-CEQMTGRCVCKPGVKGS 119
G C+ C+PG +G S+ A DGC+ C C+ G + C TG+C C +G
Sbjct: 1173 TGPHCEHCKPGSFG----SALARG-DGCVPCQCNGHGDPLQGFCHNQTGQCYCTHHTQGP 1227
Query: 120 KCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSG 165
C CL P P G C G +++ + L G
Sbjct: 1228 HCESCL-PGYYGDPRD--NGTCFSQCQGRSVLLSSSVPLSLSSSLG 1270
>UNIPROTKB|Q8WWQ8 [details] [associations]
symbol:STAB2 "Stabilin-2" species:9606 "Homo sapiens"
[GO:0051636 "Gram-negative bacterial cell surface binding"
evidence=IDA] [GO:0006897 "endocytosis" evidence=ISS] [GO:0009897
"external side of plasma membrane" evidence=ISS] [GO:0005041
"low-density lipoprotein receptor activity" evidence=IDA]
[GO:0005044 "scavenger receptor activity" evidence=IDA] [GO:0005887
"integral to plasma membrane" evidence=IDA] [GO:0006898
"receptor-mediated endocytosis" evidence=TAS] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0051635 "bacterial cell surface
binding" evidence=IDA] [GO:0015035 "protein disulfide
oxidoreductase activity" evidence=NAS] [GO:0030169 "low-density
lipoprotein particle binding" evidence=IDA] [GO:0042742 "defense
response to bacterium" evidence=IDA] [GO:0001525 "angiogenesis"
evidence=NAS] [GO:0005540 "hyaluronic acid binding" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0005975
"carbohydrate metabolic process" evidence=TAS] [GO:0030203
"glycosaminoglycan metabolic process" evidence=TAS] [GO:0030212
"hyaluronan metabolic process" evidence=TAS] [GO:0030214
"hyaluronan catabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_111217 InterPro:IPR000538
InterPro:IPR000742 Pfam:PF00193 PROSITE:PS01241 PROSITE:PS50026
PROSITE:PS50963 SMART:SM00181 SMART:SM00445 Pfam:PF02469
InterPro:IPR000782 GO:GO:0005737 Reactome:REACT_116125
GO:GO:0005887 GO:GO:0009897 GO:GO:0044281 GO:GO:0005975
GO:GO:0042742 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0007155 GO:GO:0001525
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0015035
GO:GO:0030169 eggNOG:COG2335 Gene3D:2.30.180.10 SMART:SM00554
SUPFAM:SSF82153 PROSITE:PS50213 GO:GO:0030214 InterPro:IPR009030
SUPFAM:SSF57184 GO:GO:0051636 GO:GO:0005044 GO:GO:0005540
GO:GO:0005041 InterPro:IPR024731 Pfam:PF12947 Gene3D:2.40.155.10
InterPro:IPR023413 HOVERGEN:HBG079218 EMBL:AJ295695 EMBL:AB052958
EMBL:AY311388 EMBL:AK024503 EMBL:AK074051 EMBL:AK160380
EMBL:AY227444 EMBL:AF160476 IPI:IPI00292579 RefSeq:NP_060034.9
UniGene:Hs.408249 ProteinModelPortal:Q8WWQ8 SMR:Q8WWQ8
MINT:MINT-6542238 STRING:Q8WWQ8 PhosphoSite:Q8WWQ8 DMDM:145559531
PaxDb:Q8WWQ8 PRIDE:Q8WWQ8 Ensembl:ENST00000388887 GeneID:55576
KEGG:hsa:55576 UCSC:uc001tjw.3 CTD:55576 GeneCards:GC12P103981
HGNC:HGNC:18629 HPA:HPA026871 MIM:608561 neXtProt:NX_Q8WWQ8
PharmGKB:PA38611 InParanoid:Q8WWQ8 OMA:IPKCCKG OrthoDB:EOG4QNMV8
GenomeRNAi:55576 NextBio:60076 ArrayExpress:Q8WWQ8 Bgee:Q8WWQ8
CleanEx:HS_STAB2 Genevestigator:Q8WWQ8 GermOnline:ENSG00000136011
Uniprot:Q8WWQ8
Length = 2551
Score = 138 (53.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 35/100 (35%), Positives = 44/100 (44%)
Query: 25 GPDNAGCPS--TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYA 82
G D CP CN G D T +CKC G G C+ C PG +G
Sbjct: 1956 GRDCQACPGGPDAPCNNRGVCLDQ-YSATGECKCNTGFNGTACEMCWPGRFG-------- 2006
Query: 83 PDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN 122
PD CL CGCS G +D +G+C+C+ G G C+
Sbjct: 2007 PD---CLPCGCSDHGQC-DDGITGSGQCLCETGWTGPSCD 2042
Score = 121 (47.7 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 44/170 (25%), Positives = 64/170 (37%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCG--CNKLGSTEDACIEDTEQCKCKQGVGGLKCDRC-EPG 71
CCP GPD CP G CN GS + +E C C++G GG C+ C +
Sbjct: 100 CCPGR----WGPDCIECPGGAGSPCNGRGSCAEG-MEGNGTCSCQEGFGGTACETCADDN 154
Query: 72 YWGLSKISSYAPDIDGCLKCG------CSQFGSVR-EDCEQMTGRCVCKPGVKGSKCNEC 124
+G S SS + G G C + + C++ C + S+C+
Sbjct: 155 LFGPS-CSSVCNCVHGVCNSGLDGDGTCECYSAYTGPKCDKPIPECAALLCPENSRCSPS 213
Query: 125 LDPNKKLGPNGCMPGM--EVKPCNGEPPVINLQTGVELDCGS-GANREDC 171
+ KL C+P + K C+ P + C G NR C
Sbjct: 214 TEDENKLECK-CLPNYRGDGKYCDPINPCLRKICHPHAHCTYLGPNRHSC 262
Score = 38 (18.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 6/12 (50%), Positives = 7/12 (58%)
Query: 161 DCGSGANREDCP 172
+CGS N CP
Sbjct: 1901 ECGSCVNTPSCP 1912
>UNIPROTKB|F1PSP7 [details] [associations]
symbol:NTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 OMA:NCHTCDA EMBL:AAEX03003649
EMBL:AAEX03003650 EMBL:AAEX03003651 EMBL:AAEX03003652
EMBL:AAEX03003653 Ensembl:ENSCAFT00000027581 Uniprot:F1PSP7
Length = 603
Score = 136 (52.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 41/140 (29%), Positives = 58/140 (41%)
Query: 56 CKQGVGGLKCDRCEPGYW-GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKP 114
C+ G C C+ GY+ + K ++ C C C G+ + C Q TG+C CK
Sbjct: 371 CRHNTAGRHCHYCKEGYYRDMGKPITHRK---ACKACDCHPVGAAGKTCNQTTGQCPCKD 427
Query: 115 GVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSD 174
GV G CN C ++ P + PC + PV T S EDC D
Sbjct: 428 GVTGITCNRCAKGYQQ----SRSP---IAPCI-KIPVAPPTTAAS----SVEEPEDC--D 473
Query: 175 AYCHITQ-----NFARCCRK 189
+YC ++ N + CRK
Sbjct: 474 SYCKASKGKLKINMKKYCRK 493
Score = 110 (43.8 bits), Expect = 0.00086, P = 0.00086
Identities = 27/72 (37%), Positives = 37/72 (51%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ +G+ C + T QC CK GV G+ C+RC GY S+ S AP I + +
Sbjct: 404 CDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQ-SR-SPIAPCIKIPVAPPTT 461
Query: 95 QFGSVRE--DCE 104
SV E DC+
Sbjct: 462 AASSVEEPEDCD 473
>MGI|MGI:1920951 [details] [associations]
symbol:Megf11 "multiple EGF-like-domains 11" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0010842 "retina layer formation"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0034109 "homotypic
cell-cell adhesion" evidence=IDA] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
MGI:MGI:1920951 GO:GO:0016021 GO:GO:0016323 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 GO:GO:0010842 GO:GO:0034109
HOGENOM:HOG000294130 Pfam:PF12661 GeneTree:ENSGT00690000101691
HSSP:P01132 HOVERGEN:HBG108333 OrthoDB:EOG42JNQJ CTD:84465
EMBL:AK122555 EMBL:AK048840 EMBL:AK051642 EMBL:AK160406
IPI:IPI00654415 IPI:IPI00752960 IPI:IPI00756127 IPI:IPI00986520
RefSeq:NP_001127871.1 RefSeq:NP_766110.3 UniGene:Mm.127721
UniGene:Mm.405602 ProteinModelPortal:Q80T91 SMR:Q80T91
STRING:Q80T91 PhosphoSite:Q80T91 PRIDE:Q80T91
Ensembl:ENSMUST00000068967 Ensembl:ENSMUST00000093829
Ensembl:ENSMUST00000118485 GeneID:214058 KEGG:mmu:214058
UCSC:uc009qby.2 UCSC:uc009qbz.2 UCSC:uc009qca.2 InParanoid:Q80T91
NextBio:374170 Bgee:Q80T91 CleanEx:MM_MEGF11 Genevestigator:Q80T91
Uniprot:Q80T91
Length = 1091
Score = 137 (53.3 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 53/189 (28%), Positives = 69/189 (36%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
C + G + +G GC C C+ + +C T C C+ G G C+
Sbjct: 334 CEPGYKGPSCQERLCPEGLHGPGCTLPCPCDTENTI--SCHPVTGACTCQPGWSGHYCNE 391
Query: 68 -CEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN-EC 124
C GY+G +GC L C C Q G+ DC +TG C C PG G C C
Sbjct: 392 SCPAGYYG-----------NGCQLPCTC-QNGA---DCHSITGSCTCAPGFMGEVCAVPC 436
Query: 125 LDPNKKLGPN-----GCMPGMEVKPCNGEPPVINLQTGVE--LDCGSGANREDCPSDAYC 177
GPN C G P +G G++ L C SG +C C
Sbjct: 437 AAGT--YGPNCSSVCSCSNGGTCSPVDGSCTCREGWQGLDCSLPCPSGTWGLNCNETCIC 494
Query: 178 HITQNFARC 186
N A C
Sbjct: 495 ---ANGAAC 500
Score = 133 (51.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 36/117 (30%), Positives = 47/117 (40%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
CL W G D+ T G C +C C GS C + C+C G G C R
Sbjct: 552 CLAGWTGIRCDS-TCPPGRWGPNCSVSCSCENGGS----CSPEDGSCECAPGFRGPLCQR 606
Query: 68 -CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
C PG++G GC + C R C ++G C C PG G+ CN+
Sbjct: 607 ICPPGFYG-----------HGCAQ-PCPLCVHSRGPCHHISGICECLPGFSGALCNQ 651
Score = 124 (48.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 49/153 (32%), Positives = 62/153 (40%)
Query: 47 CIEDTEQCKCKQGVGGLKC-DRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQ 105
C T QC C G G +C + C G +G + S +C C G C
Sbjct: 282 CDHVTGQCHCTAGYMGDRCQEECPFGTFGF--LCSQ--------RCDCHNGGQ----CSP 327
Query: 106 MTGRCVCKPGVKGSKCNECLDPNKKLGPNGC-MPGMEVKPCNGEPPV-INLQTGVELDCG 163
TG C C+PG KG C E L P GP GC +P PC+ E + + TG C
Sbjct: 328 ATGACECEPGYKGPSCQERLCPEGLHGP-GCTLPC----PCDTENTISCHPVTGA-CTCQ 381
Query: 164 SGAN----REDCPSDAY---CHIT---QNFARC 186
G + E CP+ Y C + QN A C
Sbjct: 382 PGWSGHYCNESCPAGYYGNGCQLPCTCQNGADC 414
Score = 121 (47.7 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 36/116 (31%), Positives = 53/116 (45%)
Query: 31 CPSTC-G--CNKLGSTED--ACIEDTEQCKCKQGVGGLKCD-RCEPGYWGLSKISSYAPD 84
CPS G C + ++ +C T +C C+ G G C+ RC PG +G Y
Sbjct: 739 CPSAFFGKDCGHICQCQNGASCDHITGKCTCRTGFSGRHCEQRCAPGTFG------Y--- 789
Query: 85 IDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC------LDPNKKLGP 133
GC + C C + C+ +TG C C PG KG +C++ L+P K+ P
Sbjct: 790 --GCQQLCECMNNAT----CDHVTGTCYCSPGFKGIRCDQAALMMDELNPYTKISP 839
Score = 121 (47.7 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 52/167 (31%), Positives = 64/167 (38%)
Query: 33 STCGCNKLGSTEDACIE-DTEQCKCKQGVGGLKCDRCEPGYWGLSKISS------YAPDI 85
S C C D CI TE+C + V C CEPG WG SS + P
Sbjct: 85 SQC-CPGYYENGDFCIPLCTEECMHGRCVSPDTC-HCEPG-WGGPDCSSGCDSEHWGPHC 141
Query: 86 DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE-CLDPNKKLGPN---GCMPGME 141
+C C Q G++ C +TG CVC PG +G +C E C G C G
Sbjct: 142 SN--RCQC-QNGAL---CNPITGACVCAPGFRGWRCEELCAPGTHGKGCQLLCQCHHGAS 195
Query: 142 VKPCNGEPPVINLQTGVELD--CGSGANREDCPSDAYCHITQNFARC 186
P GE TGV + C G++ C C QN C
Sbjct: 196 CDPRTGECLCAPGYTGVYCEELCPPGSHGAHCELRCPC---QNGGTC 239
Score = 116 (45.9 bits), Expect = 0.00033, P = 0.00033
Identities = 44/152 (28%), Positives = 60/152 (39%)
Query: 42 STEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVR 100
S D C T C C G G++CD C PG WG P+ + C C GS
Sbjct: 538 SHADGCDPVTGHCCCLAGWTGIRCDSTCPPGRWG--------PNCS--VSCSCENGGS-- 585
Query: 101 EDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPC----NGEPPVINLQT 156
C G C C PG +G C P G +GC +PC + P ++ +
Sbjct: 586 --CSPEDGSCECAPGFRGPLCQRICPPGF-YG-HGC-----AQPCPLCVHSRGPCHHI-S 635
Query: 157 GVELDCGSGANREDCPSD-AYCHITQNFARCC 187
G+ +C G + C A H Q+ A+ C
Sbjct: 636 GI-CECLPGFSGALCNQVCAGGHFGQDCAQLC 666
>UNIPROTKB|E2R6C0 [details] [associations]
symbol:ATRNL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030246 "carbohydrate binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001304 InterPro:IPR002165
InterPro:IPR015915 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0007186 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431
SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 CTD:26033 OMA:YTQQKVS
InterPro:IPR013111 InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
GeneTree:ENSGT00390000001118 EMBL:AAEX03015548 EMBL:AAEX03015549
EMBL:AAEX03015550 EMBL:AAEX03015551 EMBL:AAEX03015552
RefSeq:XP_544031.3 Ensembl:ENSCAFT00000018678 GeneID:486901
KEGG:cfa:486901 NextBio:20860606 Uniprot:E2R6C0
Length = 1381
Score = 136 (52.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 35/104 (33%), Positives = 48/104 (46%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG-CL 89
CP+ C CN G + CI + +CK G +C C PGY+G P G C
Sbjct: 1012 CPA-CQCN--GHS--TCINNNVCEQCKNLTTGKQCQDCMPGYYG-------DPTNGGQCT 1059
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKP-GVKGSKCNECLDPNKKLG 132
C CS ++ C TG+C C G+KG +C C N+ +G
Sbjct: 1060 ACTCSGHANI---CHMHTGKCFCTTKGIKGDQCQLCDSENRYVG 1100
Score = 35 (17.4 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 1 SGIYLKSCLDSWYGCCPD 18
+G L C DSW G PD
Sbjct: 265 TGEKLCVCNDSWQG--PD 280
>WB|WBGene00006787 [details] [associations]
symbol:unc-52 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IGI;IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0061199 "striated muscle contraction involved in
embryonic body morphogenesis" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0016358 "dendrite development" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IMP] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0007173 "epidermal growth factor
receptor signaling pathway" evidence=IGI] [GO:0016477 "cell
migration" evidence=IGI] [GO:0048644 "muscle organ morphogenesis"
evidence=IGI] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005198 "structural molecule activity" evidence=ISS]
[GO:0031581 "hemidesmosome assembly" evidence=IGI] [GO:0040017
"positive regulation of locomotion" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835
SMART:SM00181 SMART:SM00192 EMBL:Z93375 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0007173 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016477 GO:GO:0002119 GO:GO:0048644
GO:GO:0005198 GO:GO:0018996 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0016358 GO:GO:0040017
GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030239 GO:GO:0030163 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GeneTree:ENSGT00530000063501 GO:GO:0005604
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0031581 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 GO:GO:0061199
eggNOG:NOG258321 OMA:GVTQQCA EMBL:L13458 EMBL:Z93395 EMBL:AF132883
PIR:C88369 PIR:F88369 PIR:T19821 RefSeq:NP_001022488.1
RefSeq:NP_497044.3 RefSeq:NP_497045.1 RefSeq:NP_497046.1
RefSeq:NP_497047.1 ProteinModelPortal:Q06561 SMR:Q06561
IntAct:Q06561 STRING:Q06561 PaxDb:Q06561 PRIDE:Q06561
EnsemblMetazoa:ZC101.2e GeneID:175126 KEGG:cel:CELE_ZC101.2
UCSC:ZC101.2e CTD:175126 WormBase:ZC101.2a WormBase:ZC101.2b
WormBase:ZC101.2c WormBase:ZC101.2e WormBase:ZC101.2f
InParanoid:Q06561 NextBio:886870 ArrayExpress:Q06561 Uniprot:Q06561
Length = 3375
Score = 125 (49.1 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 35/107 (32%), Positives = 45/107 (42%)
Query: 43 TEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL-------KCGCSQ 95
T D + EQC C G G C+ C PGY + S Y P + C+ +CG
Sbjct: 623 TPDGLALEVEQCVCPPGYLGTSCEDCAPGY----ERSGYGPYLGTCVPIQPRHQQCGP-- 676
Query: 96 FGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNK----KLGPNGCMP 138
G+V G+C CK V G C+ C PN P GC+P
Sbjct: 677 -GAVAPTAPAQ-GQCQCKASVIGPNCDRCA-PNSFGLAPTNPQGCIP 720
Score = 123 (48.4 bits), Expect = 0.00014, P = 0.00014
Identities = 30/102 (29%), Positives = 45/102 (44%)
Query: 50 DTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGR 109
+ EQC C G G C+ C PGY S+ + C KC C+ S C++ G
Sbjct: 918 EVEQCICPPGYVGTSCEDCAPGY---SRTGG-GLYLGLCEKCECNGHAS---QCDKEYGY 970
Query: 110 CV-CKPGVKGSKCNEC----LDPNKKLGPNGCMPGMEVKPCN 146
C+ C+ +G +C C + ++ PN C P PC+
Sbjct: 971 CLDCQHNTEGDQCERCKPGFVGDARRGTPNDCQPEATRAPCH 1012
Score = 107 (42.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 25/50 (50%), Positives = 31/50 (62%)
Query: 54 CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDC 103
C+CK V G CD+C+PG + LS+ S P+ GCLKC C FG V DC
Sbjct: 400 CECKSQVTGPNCDQCKPGAFHLSEKS---PE--GCLKCFC--FG-VSNDC 441
Score = 101 (40.6 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 37/113 (32%), Positives = 46/113 (40%)
Query: 4 YL-KSCLDSWYGCCPDNKTLAQGPDNAGC-P-----STCGCNKLGSTEDACIEDTEQCKC 56
YL SC D C P + GP C P CG + T A QC+C
Sbjct: 640 YLGTSCED----CAPGYERSGYGPYLGTCVPIQPRHQQCGPGAVAPTAPA----QGQCQC 691
Query: 57 KQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGR 109
K V G CDRC P +GL+ + P GC+ C CS V + C + R
Sbjct: 692 KASVIGPNCDRCAPNSFGLAPTN---PQ--GCIPCFCS---GVTQQCSASSYR 736
Score = 90 (36.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 19/64 (29%), Positives = 28/64 (43%)
Query: 109 RCVCKPGVKGSKCNECLDPNKKLGPNGCMPGM-EVKPCNGEPPVINLQTGVELDCGSGAN 167
+C+C PG G+ C +C + G G G+ E CNG + + G LDC
Sbjct: 921 QCICPPGYVGTSCEDCAPGYSRTG-GGLYLGLCEKCECNGHASQCDKEYGYCLDCQHNTE 979
Query: 168 REDC 171
+ C
Sbjct: 980 GDQC 983
Score = 59 (25.8 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 18/69 (26%), Positives = 28/69 (40%)
Query: 109 RCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANR 168
+CVC PG G+ C +C ++ G G + C + +Q + CG GA
Sbjct: 633 QCVCPPGYLGTSCEDCAPGYERSGY-----GPYLGTC------VPIQPRHQ-QCGPGAVA 680
Query: 169 EDCPSDAYC 177
P+ C
Sbjct: 681 PTAPAQGQC 689
>UNIPROTKB|Q06561 [details] [associations]
symbol:unc-52 "Basement membrane proteoglycan" species:6239
"Caenorhabditis elegans" [GO:0003674 "molecular_function"
evidence=ND] [GO:0030239 "myofibril assembly" evidence=IEP]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IDA]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835
SMART:SM00181 SMART:SM00192 EMBL:Z93375 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0007173 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016477 GO:GO:0002119 GO:GO:0048644
GO:GO:0005198 GO:GO:0018996 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0016358 GO:GO:0040017
GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030239 GO:GO:0030163 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GeneTree:ENSGT00530000063501 GO:GO:0005604
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0031581 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 GO:GO:0061199
eggNOG:NOG258321 OMA:GVTQQCA EMBL:L13458 EMBL:Z93395 EMBL:AF132883
PIR:C88369 PIR:F88369 PIR:T19821 RefSeq:NP_001022488.1
RefSeq:NP_497044.3 RefSeq:NP_497045.1 RefSeq:NP_497046.1
RefSeq:NP_497047.1 ProteinModelPortal:Q06561 SMR:Q06561
IntAct:Q06561 STRING:Q06561 PaxDb:Q06561 PRIDE:Q06561
EnsemblMetazoa:ZC101.2e GeneID:175126 KEGG:cel:CELE_ZC101.2
UCSC:ZC101.2e CTD:175126 WormBase:ZC101.2a WormBase:ZC101.2b
WormBase:ZC101.2c WormBase:ZC101.2e WormBase:ZC101.2f
InParanoid:Q06561 NextBio:886870 ArrayExpress:Q06561 Uniprot:Q06561
Length = 3375
Score = 125 (49.1 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 35/107 (32%), Positives = 45/107 (42%)
Query: 43 TEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCL-------KCGCSQ 95
T D + EQC C G G C+ C PGY + S Y P + C+ +CG
Sbjct: 623 TPDGLALEVEQCVCPPGYLGTSCEDCAPGY----ERSGYGPYLGTCVPIQPRHQQCGP-- 676
Query: 96 FGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNK----KLGPNGCMP 138
G+V G+C CK V G C+ C PN P GC+P
Sbjct: 677 -GAVAPTAPAQ-GQCQCKASVIGPNCDRCA-PNSFGLAPTNPQGCIP 720
Score = 123 (48.4 bits), Expect = 0.00014, P = 0.00014
Identities = 30/102 (29%), Positives = 45/102 (44%)
Query: 50 DTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGR 109
+ EQC C G G C+ C PGY S+ + C KC C+ S C++ G
Sbjct: 918 EVEQCICPPGYVGTSCEDCAPGY---SRTGG-GLYLGLCEKCECNGHAS---QCDKEYGY 970
Query: 110 CV-CKPGVKGSKCNEC----LDPNKKLGPNGCMPGMEVKPCN 146
C+ C+ +G +C C + ++ PN C P PC+
Sbjct: 971 CLDCQHNTEGDQCERCKPGFVGDARRGTPNDCQPEATRAPCH 1012
Score = 107 (42.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 25/50 (50%), Positives = 31/50 (62%)
Query: 54 CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDC 103
C+CK V G CD+C+PG + LS+ S P+ GCLKC C FG V DC
Sbjct: 400 CECKSQVTGPNCDQCKPGAFHLSEKS---PE--GCLKCFC--FG-VSNDC 441
Score = 101 (40.6 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 37/113 (32%), Positives = 46/113 (40%)
Query: 4 YL-KSCLDSWYGCCPDNKTLAQGPDNAGC-P-----STCGCNKLGSTEDACIEDTEQCKC 56
YL SC D C P + GP C P CG + T A QC+C
Sbjct: 640 YLGTSCED----CAPGYERSGYGPYLGTCVPIQPRHQQCGPGAVAPTAPA----QGQCQC 691
Query: 57 KQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGR 109
K V G CDRC P +GL+ + P GC+ C CS V + C + R
Sbjct: 692 KASVIGPNCDRCAPNSFGLAPTN---PQ--GCIPCFCS---GVTQQCSASSYR 736
Score = 90 (36.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 19/64 (29%), Positives = 28/64 (43%)
Query: 109 RCVCKPGVKGSKCNECLDPNKKLGPNGCMPGM-EVKPCNGEPPVINLQTGVELDCGSGAN 167
+C+C PG G+ C +C + G G G+ E CNG + + G LDC
Sbjct: 921 QCICPPGYVGTSCEDCAPGYSRTG-GGLYLGLCEKCECNGHASQCDKEYGYCLDCQHNTE 979
Query: 168 REDC 171
+ C
Sbjct: 980 GDQC 983
Score = 59 (25.8 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 18/69 (26%), Positives = 28/69 (40%)
Query: 109 RCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANR 168
+CVC PG G+ C +C ++ G G + C + +Q + CG GA
Sbjct: 633 QCVCPPGYLGTSCEDCAPGYERSGY-----GPYLGTC------VPIQPRHQ-QCGPGAVA 680
Query: 169 EDCPSDAYC 177
P+ C
Sbjct: 681 PTAPAQGQC 689
>UNIPROTKB|F1N0C7 [details] [associations]
symbol:NTN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060603 "mammary gland duct morphogenesis"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0030517 "negative regulation of axon extension" evidence=IEA]
[GO:0030334 "regulation of cell migration" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005737 GO:GO:0007411 GO:GO:0001764
GO:GO:0008284 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
GO:GO:0016337 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 GO:GO:0030517 SMART:SM00643 GO:GO:0060603
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 KO:K06843 CTD:9423 OMA:NCHTCDA
EMBL:DAAA02048825 EMBL:DAAA02048826 EMBL:DAAA02048827
EMBL:DAAA02048828 EMBL:DAAA02048829 EMBL:DAAA02048830
EMBL:DAAA02048831 IPI:IPI00704401 RefSeq:NP_001179495.1
UniGene:Bt.88333 Ensembl:ENSBTAT00000016103 GeneID:522767
KEGG:bta:522767 NextBio:20873588 Uniprot:F1N0C7
Length = 603
Score = 135 (52.6 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 41/140 (29%), Positives = 58/140 (41%)
Query: 56 CKQGVGGLKCDRCEPGYW-GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKP 114
C+ G C C+ GY+ L K ++ C C C G+ + C Q TG+C CK
Sbjct: 370 CRHNTAGRHCHYCKEGYYRDLGKPITHRK---ACKACDCHPVGAAGKTCNQTTGQCPCKD 426
Query: 115 GVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSD 174
GV G CN C ++ P + PC + PV T S EDC D
Sbjct: 427 GVTGITCNRCAKGYQQ----SRSP---IAPCI-KIPVAPPTTAAS----SVEEPEDC--D 472
Query: 175 AYCHITQ-----NFARCCRK 189
+YC ++ N + C+K
Sbjct: 473 SYCKASKGKLKINMKKYCKK 492
Score = 110 (43.8 bits), Expect = 0.00086, P = 0.00086
Identities = 27/72 (37%), Positives = 37/72 (51%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ +G+ C + T QC CK GV G+ C+RC GY S+ S AP I + +
Sbjct: 403 CDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQ-SR-SPIAPCIKIPVAPPTT 460
Query: 95 QFGSVRE--DCE 104
SV E DC+
Sbjct: 461 AASSVEEPEDCD 472
>FB|FBgn0027594 [details] [associations]
symbol:drpr "draper" species:7227 "Drosophila melanogaster"
[GO:0007155 "cell adhesion" evidence=ISS] [GO:0008345 "larval
locomotory behavior" evidence=IMP] [GO:0006909 "phagocytosis"
evidence=IMP;TAS] [GO:0031224 "intrinsic to membrane" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016322 "neuron
remodeling" evidence=IMP] [GO:0035212 "cell competition in a
multicellular organism" evidence=IMP] [GO:0048190 "wing disc
dorsal/ventral pattern formation" evidence=IGI] [GO:0043277
"apoptotic cell clearance" evidence=IMP] [GO:0035071 "salivary
gland cell autophagic cell death" evidence=IMP] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
GO:GO:0048190 EMBL:AE014296 GO:GO:0016322 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 GO:GO:0008345 GO:GO:0035071
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0031224
GO:GO:0043277 Pfam:PF12661 GO:GO:0035212
GeneTree:ENSGT00690000101914 RefSeq:NP_728660.2 UniGene:Dm.3167
ProteinModelPortal:Q9W0A0 SMR:Q9W0A0 DIP:DIP-19640N
MINT:MINT-7555415 STRING:Q9W0A0 EnsemblMetazoa:FBtr0072799
GeneID:38218 KEGG:dme:Dmel_CG2086 UCSC:CG2086-RB CTD:38218
FlyBase:FBgn0027594 InParanoid:Q9W0A0 OMA:ALCDHIS OrthoDB:EOG4RXWF6
ChiTaRS:drpr GenomeRNAi:38218 NextBio:807575 Bgee:Q9W0A0
Uniprot:Q9W0A0
Length = 1031
Score = 136 (52.9 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 56/187 (29%), Positives = 68/187 (36%)
Query: 8 CLDSWYGC-CPDNKT-LAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKC 65
C W C T L GP+ C TC C K G+ C C C G G C
Sbjct: 380 CSIGWSSAQCTRPCTFLRYGPN---CELTCNC-KNGAK---CSPVNGTCLCAPGWRGPTC 432
Query: 66 DR-CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
+ CEPG +G D L+C C Q G+ CE TG+C+C G K KC+
Sbjct: 433 EESCEPGTFGQ----------DCALRCDC-QNGA---KCEPETGQCLCTAGWKNIKCDRP 478
Query: 125 LDPNKKLGPN-----GCMPGMEVKPCNGEPPVINLQTG--VELDCGSGANREDCPSDAYC 177
D N G + C P NG TG E C +G DC C
Sbjct: 479 CDLNH-FGQDCAKVCDCHNNAACNPQNGSCTCAAGWTGERCERKCDTGKFGHDCAQKCQC 537
Query: 178 HITQNFA 184
+ A
Sbjct: 538 DFNNSLA 544
Score = 132 (51.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 58/196 (29%), Positives = 74/196 (37%)
Query: 8 CLDSWYGCCPD--NKTLAQGPDNAGCPSTC-----G------CNKLGSTEDACIEDTEQC 54
CL++ C PD N + G A C C G C ++ +C T +
Sbjct: 582 CLNN-SSCDPDSGNCICSAGWTGADCAEPCPPGFYGMECKERCPEILHGNKSCDHITGEI 640
Query: 55 KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCK 113
C+ G GL C+ P GL Y P GC LKC C G +C +TG+C C
Sbjct: 641 LCRTGYIGLTCEHPCPA--GL-----YGP---GCKLKCNCEHGG----ECNHVTGQCQCL 686
Query: 114 PGVKGSKCNECLDPNKKLGPNGCMPGMEV---KPCNGEPPVINLQTGVELDCGSGANRED 170
PG GS CNE P G GC K C + +TG G+ + E
Sbjct: 687 PGWTGSNCNESC-PTDTYG-QGCAQRCRCVHHKVCRKADGMCICETGWS---GTRCD-EV 740
Query: 171 CPSDAYCHITQNFARC 186
CP Y N C
Sbjct: 741 CPEGFYGEHCMNTCAC 756
Score = 129 (50.5 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 47/186 (25%), Positives = 67/186 (36%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
C W G + C TC C+ + T D C +T C+C G +C R
Sbjct: 334 CNPGWTGAKCAERICEANKYGLDCNRTCECD-MEHT-DLCHPETGNCQCSIGWSSAQCTR 391
Query: 68 CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDP 127
P Y P+ + L C C G+ C + G C+C PG +G C E +P
Sbjct: 392 --P-----CTFLRYGPNCE--LTCNCKN-GA---KCSPVNGTCLCAPGWRGPTCEESCEP 438
Query: 128 NKKLGPN-----GCMPGMEVKPCNGEPPVINLQTGVELD--CGSGANREDCPSDAYCHIT 180
G + C G + +P G+ ++ D C +DC CH
Sbjct: 439 GT-FGQDCALRCDCQNGAKCEPETGQCLCTAGWKNIKCDRPCDLNHFGQDCAKVCDCH-- 495
Query: 181 QNFARC 186
N A C
Sbjct: 496 -NNAAC 500
Score = 128 (50.1 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 44/149 (29%), Positives = 62/149 (41%)
Query: 47 CIEDTEQCKCKQGVGGLKCD-RCEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCE 104
CI E+CKC G GG CD C PG++G + C ++C C +V CE
Sbjct: 111 CISP-EKCKCDHGYGGPACDINCPPGWYGRN-----------CSMQCDCLN-NAV---CE 154
Query: 105 QMTGRCVCKPGVKGSKCNECLDPNKKLGPN-----GCMPGMEVKPCNGEPPVINLQTG-- 157
+G C C G G++C + + P G N C G + +GE TG
Sbjct: 155 PFSGDCECAKGYTGARCAD-ICPEGFFGANCSEKCRCENGGKCHHVSGECQCAPGFTGPL 213
Query: 158 VELDCGSGANREDCPSDAYCHITQNFARC 186
++ C G + C D C QN +C
Sbjct: 214 CDMRCPDGKHGAQCQQDCPC---QNDGKC 239
>UNIPROTKB|F1N6Y9 [details] [associations]
symbol:CELSR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090251 "protein localization involved in establishment
of planar polarity" evidence=IEA] [GO:0090179 "planar cell polarity
pathway involved in neural tube closure" evidence=IEA] [GO:0060490
"lateral sprouting involved in lung morphogenesis" evidence=IEA]
[GO:0060489 "planar dichotomous subdivision of terminal units
involved in lung branching morphogenesis" evidence=IEA] [GO:0060488
"orthogonal dichotomous subdivision of terminal units involved in
lung branching morphogenesis" evidence=IEA] [GO:0048105
"establishment of body hair planar orientation" evidence=IEA]
[GO:0045176 "apical protein localization" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0042249 "establishment
of planar polarity of embryonic epithelium" evidence=IEA]
[GO:0042060 "wound healing" evidence=IEA] [GO:0032956 "regulation
of actin cytoskeleton organization" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0007266 "Rho
protein signal transduction" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0001843 "neural tube
closure" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001879 InterPro:IPR001881
InterPro:IPR017981 InterPro:IPR017983 Pfam:PF00002 Pfam:PF00008
Pfam:PF01825 Pfam:PF02793 PRINTS:PR00249 PROSITE:PS00650
PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261
SMART:SM00008 SMART:SM00179 SMART:SM00181 SMART:SM00303
InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886 GO:GO:0001764
GO:GO:0009952 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
GO:GO:0007626 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0042472 GO:GO:0001942 GO:GO:0007266
GO:GO:0001843 GO:GO:0042060 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS00010
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0032956
InterPro:IPR022624 Pfam:PF12003 GeneTree:ENSGT00700000104170
GO:GO:0045176 Pfam:PF02210 GO:GO:0048105 GO:GO:0042249
GO:GO:0060490 GO:GO:0060488 GO:GO:0090179 GO:GO:0060489
GO:GO:0090251 EMBL:DAAA02014976 EMBL:DAAA02014977 EMBL:DAAA02014978
EMBL:DAAA02014979 IPI:IPI00694670 Ensembl:ENSBTAT00000010571
OMA:ALRSNLH Uniprot:F1N6Y9
Length = 1675
Score = 137 (53.3 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 46/152 (30%), Positives = 63/152 (41%)
Query: 2 GIYLKSCLDSWY-GCCPDNKTLAQGPDNA-GCPSTCGCNKLGSTEDACIEDTEQCKCKQG 59
G + K C+D+ + C PD+ G CG + G C E+ C +G
Sbjct: 549 GYFGKRCVDACHMNPCRHAAACVHSPDSPRGYVCECGSSHYGQY---C-ENRIDLPCPRG 604
Query: 60 V-GGLKCDRCE----PGYWG-LSKIS-------SY--APDIDGCLKCGCSQFGSVREDCE 104
G C C G+ +K S +Y P D CL C C GS C+
Sbjct: 605 WWGNPVCGPCHCAVSKGFDADCNKTSGQCQCKENYYRPPGQDACLPCDCFPHGSHSRVCD 664
Query: 105 QMTGRCVCKPGVKGSKCNECLDPNKKLGPNGC 136
TG+C CKPGV G +CN C +P ++ GC
Sbjct: 665 MDTGQCSCKPGVIGRQCNRCDNPFAEVTVLGC 696
>UNIPROTKB|F1RIQ1 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 OMA:GGPFLLT
EMBL:CU929759 Ensembl:ENSSSCT00000003491 Uniprot:F1RIQ1
Length = 489
Score = 134 (52.2 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 24/70 (34%), Positives = 31/70 (44%)
Query: 55 KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKP 114
+C+ G C C+PG+W S C C C G+ C Q +G+C CK
Sbjct: 241 RCRHHTAGRHCHYCQPGFW--RDPSQPITSRKACRACQCHPIGATGGTCNQTSGQCSCKI 298
Query: 115 GVKGSKCNEC 124
GV G CN C
Sbjct: 299 GVTGLTCNRC 308
Score = 117 (46.2 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGY 72
C C+ +G+T C + + QC CK GV GL C+RC PGY
Sbjct: 275 CQCHPIGATGGTCNQTSGQCSCKIGVTGLTCNRCGPGY 312
>UNIPROTKB|A0JM12 [details] [associations]
symbol:megf10 "Multiple epidermal growth factor-like
domains protein 10" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0014719 "satellite cell activation" evidence=ISS] [GO:0014816
"satellite cell differentiation" evidence=ISS] [GO:0014841
"satellite cell proliferation" evidence=ISS] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
GO:GO:0016021 GO:GO:0005886 GO:GO:0007155 GO:GO:0006909
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030239 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0014816
Pfam:PF12661 GeneTree:ENSGT00690000101691 CTD:84466
HOVERGEN:HBG108333 OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841
EMBL:BC125696 RefSeq:NP_001072726.1 UniGene:Str.46279
ProteinModelPortal:A0JM12 Ensembl:ENSXETT00000034579 GeneID:780183
KEGG:xtr:780183 Xenbase:XB-GENE-491974 Bgee:A0JM12 Uniprot:A0JM12
Length = 1114
Score = 136 (52.9 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 42/128 (32%), Positives = 55/128 (42%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR 67
CL W G D+ G C +C C K G++ C D C+C G G C R
Sbjct: 558 CLAGWAGMHCDS-VCPGGHWGPNCSLSCDC-KNGAS---CSPDDGICECAPGYRGTTCQR 612
Query: 68 -CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
C PG++G + S C +C S G C +TG+C C G GS CNE
Sbjct: 613 ICSPGFYG-HRCSQ------ACPQCVHSN-GP----CHHVTGQCDCLAGFMGSLCNEVC- 659
Query: 127 PNKKLGPN 134
P+ + G N
Sbjct: 660 PSGRYGKN 667
Score = 132 (51.5 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 42/150 (28%), Positives = 63/150 (42%)
Query: 23 AQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSY 81
++G C C C+ L T+ +C + +C CK G GL C+ C G++G +
Sbjct: 355 SEGTYGMKCDKKCPCH-LQYTQ-SCHPMSGECACKPGRSGLYCNETCSLGFYG-----EF 407
Query: 82 APDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGME 141
I C C Q G+ DC+ +TG+C+C PG G C+ P G N C
Sbjct: 408 CQQI-----CSC-QNGA---DCDSVTGKCICAPGFTGVDCSTACPPGT-YGVN-CS---- 452
Query: 142 VKPCNGEPPVINLQTGVELDCGSGANREDC 171
CN + + C +G + DC
Sbjct: 453 -SLCNCKNNAVCSPVDGSCTCKAGWHGVDC 481
Score = 125 (49.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 36/123 (29%), Positives = 43/123 (34%)
Query: 7 SCLDSWYGC-CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKC 65
+C W G C G C C C S D C T C+C G G+ C
Sbjct: 514 TCAPGWRGLKC--ELPCQDGTYGMNCIERCDC----SHADGCHPATGYCRCLAGWAGMHC 567
Query: 66 DR-CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNEC 124
D C G+WG P+ L C C S C G C C PG +G+ C
Sbjct: 568 DSVCPGGHWG--------PNCS--LSCDCKNGAS----CSPDDGICECAPGYRGTTCQRI 613
Query: 125 LDP 127
P
Sbjct: 614 CSP 616
Score = 123 (48.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 51/181 (28%), Positives = 67/181 (37%)
Query: 19 NKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSK 77
N+T + G C C C G+ C T +C C G G+ C C PG +G++
Sbjct: 396 NETCSLGFYGEFCQQICSCQN-GAD---CDSVTGKCICAPGFTGVDCSTACPPGTYGVN- 450
Query: 78 ISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN-ECLDPNKKLGPN-- 134
SS C C +V C + G C CK G G C+ C + LG N
Sbjct: 451 CSSL---------CNCKN-NAV---CSPVDGSCTCKAGWHGVDCSINCPRGSWGLGCNLT 497
Query: 135 -GCMPGMEVKPCNGEPPVINLQTGV--ELDCGSGA------NREDCPSDAYCHITQNFAR 185
C+ G P +G G+ EL C G R DC CH + R
Sbjct: 498 CQCLNGGACNPLDGTCTCAPGWRGLKCELPCQDGTYGMNCIERCDCSHADGCHPATGYCR 557
Query: 186 C 186
C
Sbjct: 558 C 558
Score = 116 (45.9 bits), Expect = 0.00033, P = 0.00033
Identities = 55/188 (29%), Positives = 72/188 (38%)
Query: 8 CLDSW-YGCC--PDNKTLAQGPDNAGCPSTCGCNKLG---STEDACIED------TEQCK 55
C D +G C P+ G C S C + G S+ C T C
Sbjct: 108 CADKCVHGRCIAPNTCQCEPGWGGPNCSSACDVDHWGPHCSSRCQCKNGALCNPITGACH 167
Query: 56 CKQGVGGLKCD-RCEPGYWGLSKISSYAPDIDGCL-KCGCSQFGSVREDCEQMTGRCVCK 113
C G G +C+ RC+ G +G + C KC C Q G+ C+ +TG C C
Sbjct: 168 CSSGYKGWRCEERCDQGTYG-----------NDCQQKCQC-QNGA---SCDHVTGECRCP 212
Query: 114 PGVKGSKCNECLDPNKKLGPNGCMPGMEVKPC-NGEPPVINLQTGVELDCGSG----ANR 168
PG G+ C + P K G C E PC NG V + TG E C +G
Sbjct: 213 PGYTGAFCEDLCPPGKH-GSQ-CE---ERCPCQNGG--VCHHVTG-ECSCPAGWMGTVCG 264
Query: 169 EDCPSDAY 176
+ CP Y
Sbjct: 265 QPCPEGRY 272
>UNIPROTKB|F1MF28 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 CTD:126147 OMA:GGPFLLT
EMBL:DAAA02047467 IPI:IPI01001483 RefSeq:NP_001193801.1
UniGene:Bt.48155 Ensembl:ENSBTAT00000061223 GeneID:785970
KEGG:bta:785970 NextBio:20927619 Uniprot:F1MF28
Length = 489
Score = 130 (50.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 27/73 (36%), Positives = 33/73 (45%)
Query: 55 KCKQGVGGLKCDRCEPGYW---GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCV 111
+C+ G C C+PG+W G ISS C C C G+ C Q G+C
Sbjct: 241 RCRHHTAGRHCHYCQPGFWRDPG-QPISSRK----ACRACQCHPIGATGGACNQTNGQCS 295
Query: 112 CKPGVKGSKCNEC 124
CK GV G CN C
Sbjct: 296 CKLGVTGLTCNRC 308
Score = 121 (47.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 20/38 (52%), Positives = 25/38 (65%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGY 72
C C+ +G+T AC + QC CK GV GL C+RC PGY
Sbjct: 275 CQCHPIGATGGACNQTNGQCSCKLGVTGLTCNRCGPGY 312
Score = 36 (17.7 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 10/22 (45%), Positives = 10/22 (45%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCG 36
C P LA G A CP CG
Sbjct: 29 CLPPVTQLA-GMA-ASCPQACG 48
>UNIPROTKB|G3MXZ5 [details] [associations]
symbol:CELSR2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001368 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR017981 Pfam:PF00002 Pfam:PF00008
Pfam:PF01825 PRINTS:PR00249 PROSITE:PS50026 PROSITE:PS50221
PROSITE:PS50227 PROSITE:PS50261 SMART:SM00008 SMART:SM00179
SMART:SM00181 SMART:SM00208 SMART:SM00303 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005886 GO:GO:0004930 GO:GO:0007218
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
InterPro:IPR022624 Pfam:PF12003 GeneTree:ENSGT00700000104170
Pfam:PF02210 EMBL:DAAA02007576 Ensembl:ENSBTAT00000063317
Uniprot:G3MXZ5
Length = 1482
Score = 127 (49.8 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 22/54 (40%), Positives = 30/54 (55%)
Query: 83 PDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGC 136
P CL C C GS+ C+ G+C CKPGV G +C+ C +P ++ NGC
Sbjct: 781 PGSPACLLCDCYPTGSLSRVCDPEEGQCPCKPGVIGRQCDRCDNPFAEVTTNGC 834
Score = 53 (23.7 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 30 GCPS---TCGCNKLGSTEDACIE--DTEQCKCKQGVGGLKC 65
GCP+ C N + C+ D C+C G GG C
Sbjct: 435 GCPAKKNVCDSNSCHNG-GTCVNQWDAFSCECPLGFGGKSC 474
>UNIPROTKB|E2RRE4 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 OMA:GGPFLLT
EMBL:AAEX03000816 Ensembl:ENSCAFT00000006331 Uniprot:E2RRE4
Length = 489
Score = 129 (50.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 26/84 (30%), Positives = 35/84 (41%)
Query: 55 KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKP 114
+C+ G C C+PG+W C C C G+ C Q +G+C CK
Sbjct: 241 RCRHHTAGRHCHYCQPGFW--RDPGQPITSRKACRACQCHPIGATGGICNQTSGQCSCKL 298
Query: 115 GVKGSKCNECLDPNKKLGPNGCMP 138
GV G CN C P + + MP
Sbjct: 299 GVTGLTCNRC-GPGYQQSRSPWMP 321
Score = 117 (46.2 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGY 72
C C+ +G+T C + + QC CK GV GL C+RC PGY
Sbjct: 275 CQCHPIGATGGICNQTSGQCSCKLGVTGLTCNRCGPGY 312
Score = 38 (18.4 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGS 42
C P LA G A CP TC + LG+
Sbjct: 29 CLPPVTQLA-GTA-ASCPQTCALS-LGA 53
>UNIPROTKB|Q2HXW4 [details] [associations]
symbol:NTN1 "Netrin-1" species:9823 "Sus scrofa"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0006915 GO:GO:0005578 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 KO:K06843 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4H19V9 EMBL:DQ368597
RefSeq:NP_001038013.1 UniGene:Ssc.22870 ProteinModelPortal:Q2HXW4
STRING:Q2HXW4 GeneID:733599 KEGG:ssc:733599 CTD:180961
Uniprot:Q2HXW4
Length = 600
Score = 134 (52.2 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 41/140 (29%), Positives = 58/140 (41%)
Query: 56 CKQGVGGLKCDRCEPGYW-GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKP 114
C+ G C C+ GY+ L K ++ C C C G+ + C Q TG+C CK
Sbjct: 371 CRHNTAGRHCHYCKEGYFRDLGKPITHRK---ACKACDCHPVGAAGKTCNQTTGQCPCKD 427
Query: 115 GVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSD 174
GV G CN C ++ P + PC + PV T S EDC D
Sbjct: 428 GVTGVTCNRCAKGYQQ----SRSP---IAPCI-KIPVAPPTTAAS----SVEEPEDC--D 473
Query: 175 AYCHITQ-----NFARCCRK 189
+YC ++ N + C+K
Sbjct: 474 SYCKASKGKLKINMKKYCKK 493
>UNIPROTKB|Q8WTR8 [details] [associations]
symbol:NTN5 "Netrin-5" species:9606 "Homo sapiens"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005576 PROSITE:PS00022 PROSITE:PS01186
EMBL:CH471177 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 HSSP:P02468 SMART:SM00643
HOGENOM:HOG000286017 EMBL:BC018654 EMBL:BC018697 EMBL:BC021210
EMBL:BC033207 IPI:IPI00102812 IPI:IPI00645833 RefSeq:NP_665806.1
UniGene:Hs.326217 ProteinModelPortal:Q8WTR8 SMR:Q8WTR8
DMDM:74730628 PaxDb:Q8WTR8 PRIDE:Q8WTR8 Ensembl:ENST00000270235
GeneID:126147 KEGG:hsa:126147 UCSC:uc002pkb.3 UCSC:uc002pkc.3
CTD:126147 GeneCards:GC19M049164 HGNC:HGNC:25208 neXtProt:NX_Q8WTR8
PharmGKB:PA164724232 eggNOG:NOG327968 HOVERGEN:HBG096704
InParanoid:Q8WTR8 OMA:GGPFLLT OrthoDB:EOG402WS1 GenomeRNAi:126147
NextBio:81704 Bgee:Q8WTR8 Genevestigator:Q8WTR8 Uniprot:Q8WTR8
Length = 489
Score = 133 (51.9 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 23/70 (32%), Positives = 32/70 (45%)
Query: 55 KCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKP 114
+C+ G C C+PG+W ++ C C C G+ C Q +G+C CK
Sbjct: 241 RCRHHTAGRHCHYCQPGFWRDPSQPIFSRR--ACRACQCHPIGATGGTCNQTSGQCTCKL 298
Query: 115 GVKGSKCNEC 124
GV G CN C
Sbjct: 299 GVTGLTCNRC 308
Score = 117 (46.2 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGY 72
C C+ +G+T C + + QC CK GV GL C+RC PGY
Sbjct: 275 CQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGY 312
>RGD|621190 [details] [associations]
symbol:Megf8 "multiple EGF-like-domains 8" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0061371 "determination of heart
left/right asymmetry" evidence=ISO] [GO:0071907 "determination of
digestive tract left/right asymmetry" evidence=ISO] [GO:0016020
"membrane" evidence=ISO] [GO:0060287 "epithelial cilium movement
involved in determination of left/right asymmetry" evidence=ISO]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002165
InterPro:IPR015915 InterPro:IPR018097 Pfam:PF01437 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:621190 GO:GO:0016021 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 eggNOG:NOG304142 HOGENOM:HOG000113554
HOVERGEN:HBG108128 OrthoDB:EOG4JHCDR EMBL:AABR03001918
EMBL:AABR03001941 EMBL:AABR03004237 EMBL:AB011534 IPI:IPI00766905
UniGene:Rn.21378 ProteinModelPortal:Q9QYP0 IntAct:Q9QYP0
STRING:Q9QYP0 PhosphoSite:Q9QYP0 PRIDE:Q9QYP0
Ensembl:ENSRNOT00000027831 UCSC:RGD:621190 InParanoid:Q9QYP0
Genevestigator:Q9QYP0 Uniprot:Q9QYP0
Length = 2788
Score = 137 (53.3 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 50/181 (27%), Positives = 67/181 (37%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIE-DTEQC-KCKQGVGGLKC 65
C W P T A GP C CGCN C C +C+ G C
Sbjct: 1137 CDLGWTSDLPP-PTPAPGPPAPRCSRDCGCN----FHSHCRRRGPGYCDECQDWTWGEHC 1191
Query: 66 DRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED-CEQMTGRCVCKPGVKGSKCNEC 124
+RC PG +G + S GC C C+ G R C+ ++G C C+ +G+ C C
Sbjct: 1192 ERCRPGSFGNATGSG------GCRPCQCNGHGDPRRGHCDNLSGLCFCQDHTEGAHCQIC 1245
Query: 125 LDPNKKLGPNGCMPGMEVKPCNGEPPVINLQT--------GVELDCGSGANREDCPSDAY 176
P P G + C G + N+ + G L G G R P +Y
Sbjct: 1246 -SPGYYGDPRA--GGSCFRECGGRALLTNVSSVALGSRRFGGLLPPGGGTARAG-PGLSY 1301
Query: 177 C 177
C
Sbjct: 1302 C 1302
>UNIPROTKB|Q7Z7M0 [details] [associations]
symbol:MEGF8 "Multiple epidermal growth factor-like domains
protein 8" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=NAS] [GO:0005198 "structural molecule activity"
evidence=NAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002165 InterPro:IPR015915 InterPro:IPR018097
Pfam:PF01437 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
GO:GO:0005198 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
InterPro:IPR011043 SUPFAM:SSF50965 EMBL:AB011541 EMBL:AC011497
EMBL:AC024078 EMBL:BC153880 EMBL:AY280362 IPI:IPI00027310
IPI:IPI00607580 PIR:T00209 RefSeq:NP_001258867.1 RefSeq:NP_001401.2
UniGene:Hs.132483 ProteinModelPortal:Q7Z7M0 SMR:Q7Z7M0
IntAct:Q7Z7M0 MINT:MINT-2808456 STRING:Q7Z7M0 PhosphoSite:Q7Z7M0
DMDM:218511690 PaxDb:Q7Z7M0 PRIDE:Q7Z7M0 Ensembl:ENST00000251268
Ensembl:ENST00000334370 GeneID:1954 KEGG:hsa:1954 UCSC:uc002otl.4
UCSC:uc002otm.4 CTD:1954 GeneCards:GC19P042829 HGNC:HGNC:3233
HPA:HPA049248 MIM:604267 neXtProt:NX_Q7Z7M0 PharmGKB:PA27666
eggNOG:NOG304142 HOGENOM:HOG000113554 HOVERGEN:HBG108128
OMA:GHSMVFH ChiTaRS:MEGF8 GenomeRNAi:1954 NextBio:7919
ArrayExpress:Q7Z7M0 Bgee:Q7Z7M0 CleanEx:HS_MEGF8
Genevestigator:Q7Z7M0 GermOnline:ENSG00000105429 Uniprot:Q7Z7M0
Length = 2845
Score = 137 (53.3 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 51/181 (28%), Positives = 69/181 (38%)
Query: 8 CLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQ-C-KCKQGVGGLKC 65
C W P T A GP C CGC S C + C +C+ G C
Sbjct: 1137 CDLGWTSDLPP-PTPAPGPPAPRCSRDCGC----SFHSHCRKRGPGFCDECQDWTWGEHC 1191
Query: 66 DRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED-CEQMTGRCVCKPGVKGSKCNEC 124
+RC PG +G + S GC C C+ G R C+ ++G C C+ +G+ C C
Sbjct: 1192 ERCRPGSFGNATGSR------GCRPCQCNGHGDPRRGHCDNLSGLCFCQDHTEGAHCQLC 1245
Query: 125 LDPNKKLGPNGCMPGMEVKPCNGEPPVINLQT--------GVELDCGSGANREDCPSDAY 176
P P G + C G + N+ + G L G GA R P +Y
Sbjct: 1246 -SPGYYGDPRA--GGSCFRECGGRALLTNVSSVALGSRRVGGLLPPGGGAARAG-PGLSY 1301
Query: 177 C 177
C
Sbjct: 1302 C 1302
>UNIPROTKB|O95631 [details] [associations]
symbol:NTN1 "Netrin-1" species:9606 "Homo sapiens"
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030517 "negative
regulation of axon extension" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0060603 "mammary
gland duct morphogenesis" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005737
Reactome:REACT_111045 GO:GO:0006915 GO:GO:0007411 GO:GO:0001764
GO:GO:0005576 GO:GO:0008284 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0030334 Reactome:REACT_111155 GO:GO:0016337 PROSITE:PS01186
GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933 Pfam:PF01759
GO:GO:0030517 SMART:SM00643 GO:GO:0060603 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464
KO:K06843 EMBL:U75586 EMBL:GU727649 EMBL:AC090610 EMBL:AC005695
IPI:IPI00006732 RefSeq:NP_004813.2 UniGene:Hs.660885
ProteinModelPortal:O95631 SMR:O95631 DIP:DIP-46273N IntAct:O95631
STRING:O95631 PhosphoSite:O95631 PaxDb:O95631 PRIDE:O95631
Ensembl:ENST00000173229 Ensembl:ENST00000538852
Ensembl:ENST00000546090 GeneID:9423 KEGG:hsa:9423 UCSC:uc002glw.4
CTD:9423 GeneCards:GC17P008865 H-InvDB:HIX0039241 HGNC:HGNC:8029
MIM:601614 neXtProt:NX_O95631 PharmGKB:PA31813 eggNOG:NOG244580
HOGENOM:HOG000286017 InParanoid:O95631 OMA:NCHTCDA
OrthoDB:EOG4H19V9 PhylomeDB:O95631 ChEMBL:CHEMBL1741307
GenomeRNAi:9423 NextBio:35298 ArrayExpress:O95631 Bgee:O95631
CleanEx:HS_NTN1 Genevestigator:O95631 GermOnline:ENSG00000065320
Uniprot:O95631
Length = 604
Score = 133 (51.9 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 40/140 (28%), Positives = 58/140 (41%)
Query: 56 CKQGVGGLKCDRCEPGYW-GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKP 114
C+ G C C+ GY+ + K ++ C C C G+ + C Q TG+C CK
Sbjct: 371 CRHNTAGRHCHYCKEGYYRDMGKPITHRK---ACKACDCHPVGAAGKTCNQTTGQCPCKD 427
Query: 115 GVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSD 174
GV G CN C ++ P + PC + PV T S EDC D
Sbjct: 428 GVTGITCNRCAKGYQQ----SRSP---IAPCI-KIPVAPPTTAAS----SVEEPEDC--D 473
Query: 175 AYCHITQ-----NFARCCRK 189
+YC ++ N + C+K
Sbjct: 474 SYCKASKGKLKINMKKYCKK 493
Score = 110 (43.8 bits), Expect = 0.00086, P = 0.00086
Identities = 27/72 (37%), Positives = 37/72 (51%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ +G+ C + T QC CK GV G+ C+RC GY S+ S AP I + +
Sbjct: 404 CDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQ-SR-SPIAPCIKIPVAPPTT 461
Query: 95 QFGSVRE--DCE 104
SV E DC+
Sbjct: 462 AASSVEEPEDCD 473
>ZFIN|ZDB-GENE-050208-404 [details] [associations]
symbol:celsr2l "cadherin, EGF LAG seven-pass G-type
receptor 2, like" species:7955 "Danio rerio" [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0007218
"neuropeptide signaling pathway" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0007166 "cell surface receptor
signaling pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR017981 Pfam:PF00002 Pfam:PF00008
Pfam:PF01825 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 SMART:SM00179 SMART:SM00181 SMART:SM00303
ZFIN:ZDB-GENE-050208-404 GO:GO:0016021 GO:GO:0005886 GO:GO:0004930
GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 InterPro:IPR022624
Pfam:PF12003 GeneTree:ENSGT00700000104170 Pfam:PF02210
EMBL:AL645789 IPI:IPI00502412 Ensembl:ENSDART00000082453
Bgee:F1QT64 Uniprot:F1QT64
Length = 1478
Score = 135 (52.6 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 37/133 (27%), Positives = 60/133 (45%)
Query: 4 YLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGL 63
Y SC +++G + KT P +CG +T+ D + C + G
Sbjct: 459 YTCSCPSNYFGQYCEKKTDLPCPRGWWGEKSCGPCNCDTTKGF---DAD---CNKTNGA- 511
Query: 64 KCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
C RC+ ++ P D C+ C C GS+ C++ G+C CKPGV G +C+
Sbjct: 512 -C-RCKDNHFR-------PPSSDTCVLCDCYAVGSLSRVCDRAVGQCQCKPGVIGRQCDR 562
Query: 124 CLDPNKKLGPNGC 136
C +P ++ +GC
Sbjct: 563 CDNPFAEVSSSGC 575
>UNIPROTKB|D4ABC1 [details] [associations]
symbol:Celsr2 "Cadherin EGF LAG seven-pass G-type receptor
2" species:10116 "Rattus norvegicus" [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001368
InterPro:IPR001879 InterPro:IPR001881 InterPro:IPR017981
Pfam:PF00002 Pfam:PF00008 Pfam:PF01825 PRINTS:PR00249
PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261
SMART:SM00008 SMART:SM00179 SMART:SM00181 SMART:SM00208
SMART:SM00303 InterPro:IPR000152 RGD:69237 GO:GO:0016021
GO:GO:0005886 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 InterPro:IPR022624 Pfam:PF12003
Pfam:PF02210 OrthoDB:EOG4KKZ23 IPI:IPI00779219
ProteinModelPortal:D4ABC1 Ensembl:ENSRNOT00000055873
ArrayExpress:D4ABC1 Uniprot:D4ABC1
Length = 1553
Score = 126 (49.4 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 22/54 (40%), Positives = 30/54 (55%)
Query: 83 PDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGC 136
P CL C C GS+ C+ G+C CKPGV G +C+ C +P ++ NGC
Sbjct: 781 PSSPTCLLCDCYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPFAEVTTNGC 834
Score = 52 (23.4 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 30 GCPS---TCGCNKLGSTEDACIE--DTEQCKCKQGVGGLKC 65
GCP+ C N + C+ D C+C G GG C
Sbjct: 435 GCPTKKNVCDSNTCHNG-GTCVNQWDAFSCECPLGFGGKSC 474
>UNIPROTKB|Q5VV63 [details] [associations]
symbol:ATRNL1 "Attractin-like protein 1" species:9606 "Homo
sapiens" [GO:0030246 "carbohydrate binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001304 InterPro:IPR002165
InterPro:IPR015915 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 PROSITE:PS00615 GO:GO:0007186 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.120.10.80 PROSITE:PS01186
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 EMBL:AY442317 EMBL:AL357059
EMBL:AC022542 EMBL:AC091667 EMBL:AL355530 EMBL:AL356100
EMBL:AL392087 EMBL:AL512304 EMBL:BC047716 EMBL:BC139916
EMBL:BC139923 EMBL:AK127277 EMBL:AB011106 IPI:IPI00297233
IPI:IPI00749514 PIR:T00266 RefSeq:NP_997186.1 UniGene:Hs.501127
HSSP:P02468 ProteinModelPortal:Q5VV63 SMR:Q5VV63 IntAct:Q5VV63
PhosphoSite:Q5VV63 DMDM:189081675 PRIDE:Q5VV63 DNASU:26033
Ensembl:ENST00000355044 GeneID:26033 KEGG:hsa:26033 UCSC:uc001lcf.3
UCSC:uc001lcg.3 CTD:26033 GeneCards:GC10P116843 H-InvDB:HIX0021959
HGNC:HGNC:29063 HPA:HPA038070 MIM:612869 neXtProt:NX_Q5VV63
PharmGKB:PA134961599 eggNOG:NOG242225 HOVERGEN:HBG004312
InParanoid:Q5VV63 OMA:YTQQKVS OrthoDB:EOG4QC14F PhylomeDB:Q5VV63
ChiTaRS:ATRNL1 GenomeRNAi:26033 NextBio:47842 ArrayExpress:Q5VV63
Bgee:Q5VV63 CleanEx:HS_ATRNL1 Genevestigator:Q5VV63
InterPro:IPR013111 InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
Uniprot:Q5VV63
Length = 1379
Score = 134 (52.2 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 35/104 (33%), Positives = 48/104 (46%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG-CL 89
CP+ C CN G + CI + +CK G +C C PGY+G P G C
Sbjct: 1011 CPA-CQCN--GHS--TCINNNVCEQCKNLTTGKQCQDCMPGYYG-------DPTNGGQCT 1058
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKP-GVKGSKCNECLDPNKKLG 132
C CS ++ C TG+C C G+KG +C C N+ +G
Sbjct: 1059 ACTCSGHANI---CHLHTGKCFCTTKGIKGDQCQLCDSENRYVG 1099
Score = 35 (17.4 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 1 SGIYLKSCLDSWYGCCPD 18
+G L C DSW G PD
Sbjct: 264 TGEKLCVCNDSWQG--PD 279
>UNIPROTKB|Q14162 [details] [associations]
symbol:SCARF1 "Scavenger receptor class F member 1"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0030169 "low-density lipoprotein particle binding"
evidence=IDA] [GO:0006898 "receptor-mediated endocytosis"
evidence=TAS] [GO:0004888 "transmembrane signaling receptor
activity" evidence=TAS] [GO:0016021 "integral to membrane"
evidence=IDA] [GO:0005044 "scavenger receptor activity"
evidence=IDA] [GO:0006707 "cholesterol catabolic process"
evidence=IC] [GO:0010976 "positive regulation of neuron projection
development" evidence=ISS] [GO:0016322 "neuron remodeling"
evidence=ISS] [GO:0048680 "positive regulation of axon
regeneration" evidence=ISS] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 GO:GO:0016021 EMBL:CH471108 GO:GO:0006707
EMBL:AC130343 GO:GO:0016358 GO:GO:0016322 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 GO:GO:0048680 GO:GO:0004888
GO:GO:0030169 InterPro:IPR009030 SUPFAM:SSF57184 GO:GO:0005044
Pfam:PF12661 eggNOG:NOG284054 HOGENOM:HOG000015093 EMBL:D86864
EMBL:AB052946 EMBL:AB052947 EMBL:AB052948 EMBL:AB052949
EMBL:AB052950 EMBL:D63483 EMBL:BC039735 IPI:IPI00066367
IPI:IPI00169257 IPI:IPI00169258 IPI:IPI00337750 IPI:IPI00337751
RefSeq:NP_003684.2 RefSeq:NP_663325.1 RefSeq:NP_663327.2
UniGene:Hs.647430 ProteinModelPortal:Q14162 SMR:Q14162
STRING:Q14162 PhosphoSite:Q14162 DMDM:311033530 PaxDb:Q14162
PRIDE:Q14162 Ensembl:ENST00000263071 Ensembl:ENST00000348987
Ensembl:ENST00000434376 Ensembl:ENST00000571272 GeneID:8578
KEGG:hsa:8578 UCSC:uc002fsy.1 UCSC:uc002fsz.1 UCSC:uc010cjv.1
CTD:8578 GeneCards:GC17M001537 H-InvDB:HIX0013404 HGNC:HGNC:16820
HPA:HPA035108 MIM:607873 neXtProt:NX_Q14162 PharmGKB:PA38420
HOVERGEN:HBG099941 InParanoid:Q14162 OMA:GWWGPEC OrthoDB:EOG4S1T6G
GenomeRNAi:8578 NextBio:32179 ArrayExpress:Q14162 Bgee:Q14162
CleanEx:HS_SCARF1 Genevestigator:Q14162 GermOnline:ENSG00000074660
Uniprot:Q14162
Length = 830
Score = 133 (51.9 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 55/177 (31%), Positives = 71/177 (40%)
Query: 10 DSWYGCCPDNKTLAQGPDNAGCPST--CGCNK--LGST-EDACIEDTEQCKCKQGVGGLK 64
D W C A GP P+T C C ST C +T +C+Q G
Sbjct: 123 DRWGARC--EFPCACGPHGRCDPATGVCHCEPGWWSSTCRRPCQCNTAAARCEQATGA-- 178
Query: 65 CDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN-- 122
C C+PG+WG + S+ +C C GS CEQ +GRC C+PG G +C
Sbjct: 179 CV-CKPGWWG--RRCSF--------RCNCH--GS---PCEQDSGRCACRPGWWGPECQQQ 222
Query: 123 -ECLDP--NKKLGPNGCMPGMEVKPCNGEPPVINLQTGVEL--DCGSGANREDCPSD 174
EC+ + G C PG C E P GV+ CG + E C D
Sbjct: 223 CECVRGRCSAASGECTCPPGFRGARC--ELPCPAGSHGVQCAHSCGRCKHNEPCSPD 277
Score = 123 (48.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 59/209 (28%), Positives = 79/209 (37%)
Query: 8 CLDSWYGCCPDNKTLAQ--GPDNAGCPSTCGCNKLGSTEDA-----CIEDT--EQCK--C 56
C ++G ++ Q GPD C +C C+ G E A C D +C+ C
Sbjct: 77 CKPGFFGAHCSSRCPGQYWGPD---CRESCPCHPHGQCEPATGACQCQADRWGARCEFPC 133
Query: 57 KQGVGGLKCD------RCEPGYWGLSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGR 109
G G +CD CEPG+W + C + C C+ + R CEQ TG
Sbjct: 134 ACGPHG-RCDPATGVCHCEPGWWSST-----------CRRPCQCNT-AAAR--CEQATGA 178
Query: 110 CVCKPGVKGSKCN-ECL---DP-NKKLGPNGCMPGMEVKPCNGEPPVINLQTGV---ELD 161
CVCKPG G +C+ C P + G C PG C + + + E
Sbjct: 179 CVCKPGWWGRRCSFRCNCHGSPCEQDSGRCACRPGWWGPECQQQCECVRGRCSAASGECT 238
Query: 162 CGSGANREDC--PSDAYCHITQNFARCCR 188
C G C P A H Q C R
Sbjct: 239 CPPGFRGARCELPCPAGSHGVQCAHSCGR 267
Score = 111 (44.1 bits), Expect = 0.00099, P = 0.00099
Identities = 32/112 (28%), Positives = 43/112 (38%)
Query: 15 CCPDN---KTLAQGPDNAGCPSTCGCNKLG-STEDACIEDTEQCKCKQGVGGLKCDRCEP 70
C PD ++ G + C C G S E C C+ G C RC+P
Sbjct: 274 CSPDTGSCESCEPGWNGTQCQQPCLPGTFGESCEQQCPHCRHGEACEPDTG--HCQRCDP 331
Query: 71 GYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN 122
G+ G + P CG + V+ C+ +TG CVC G G CN
Sbjct: 332 GWLG-PRCEDPCPTGTFGEDCGSTCPTCVQGSCDTVTGDCVCSAGYWGPSCN 382
Score = 111 (44.1 bits), Expect = 0.00099, P = 0.00099
Identities = 50/176 (28%), Positives = 65/176 (36%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCD-RCEPGYWGLSKISSYAPDIDGCL 89
C C K ++ C++ C+CK G G C RC YWG PD C
Sbjct: 57 CEGPDACQK----DEVCVKPG-LCRCKPGFFGAHCSSRCPGQYWG--------PD---CR 100
Query: 90 K-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN-ECL-DPNKKLGP-NG---CMPGMEV 142
+ C C G CE TG C C+ G++C C P+ + P G C PG
Sbjct: 101 ESCPCHPHGQ----CEPATGACQCQADRWGARCEFPCACGPHGRCDPATGVCHCEPGWWS 156
Query: 143 ----KPCNGEPPVINLQ--TGVELDCGSGANREDCPSDAYCH---ITQNFARC-CR 188
+PC + TG + C G C CH Q+ RC CR
Sbjct: 157 STCRRPCQCNTAAARCEQATGACV-CKPGWWGRRCSFRCNCHGSPCEQDSGRCACR 211
>MGI|MGI:105088 [details] [associations]
symbol:Ntn1 "netrin 1" species:10090 "Mus musculus"
[GO:0001764 "neuron migration" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=ISO] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0007409 "axonogenesis" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IDA;IMP] [GO:0008284 "positive
regulation of cell proliferation" evidence=IMP] [GO:0016337
"cell-cell adhesion" evidence=IGI] [GO:0030334 "regulation of cell
migration" evidence=IMP;IDA] [GO:0030517 "negative regulation of
axon extension" evidence=IDA] [GO:0030879 "mammary gland
development" evidence=IGI] [GO:0033564 "anterior/posterior axon
guidance" evidence=IMP] [GO:0040023 "establishment of nucleus
localization" evidence=IDA] [GO:0042472 "inner ear morphogenesis"
evidence=IMP] [GO:0045773 "positive regulation of axon extension"
evidence=IDA] [GO:0060603 "mammary gland duct morphogenesis"
evidence=IGI] [GO:0071944 "cell periphery" evidence=ISO]
InterPro:IPR001134 PROSITE:PS50189 MGI:MGI:105088 GO:GO:0005737
GO:GO:0006915 GO:GO:0007411 GO:GO:0001764 GO:GO:0008284
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
Reactome:REACT_127416 GO:GO:0042472 GO:GO:0071944 GO:GO:0016337
PROSITE:PS01186 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 EMBL:CH466601 GO:GO:0030517 Reactome:REACT_137402
SMART:SM00643 GO:GO:0060603 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00690000102103
HOVERGEN:HBG006464 KO:K06843 CTD:9423 eggNOG:NOG244580
HOGENOM:HOG000286017 OMA:NCHTCDA OrthoDB:EOG4H19V9 EMBL:U65418
EMBL:AF128865 EMBL:AL669842 EMBL:AL606831 EMBL:AL662894
EMBL:BC141294 EMBL:U23505 IPI:IPI00114257 RefSeq:NP_032770.2
UniGene:Mm.39095 ProteinModelPortal:O09118 SMR:O09118 IntAct:O09118
STRING:O09118 PhosphoSite:O09118 PRIDE:O09118
Ensembl:ENSMUST00000021284 Ensembl:ENSMUST00000108674 GeneID:18208
KEGG:mmu:18208 InParanoid:B1ARR0 NextBio:293590 Bgee:O09118
CleanEx:MM_NTN1 Genevestigator:O09118 GermOnline:ENSMUSG00000020902
Uniprot:O09118
Length = 604
Score = 132 (51.5 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 40/140 (28%), Positives = 58/140 (41%)
Query: 56 CKQGVGGLKCDRCEPGYW-GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKP 114
C+ G C C+ G++ + K ++ C C C G+ + C Q TG+C CK
Sbjct: 371 CRHNTAGRHCHYCKEGFYRDMGKPITHRK---ACKACDCHPVGAAGKTCNQTTGQCPCKD 427
Query: 115 GVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSD 174
GV G CN C ++ P + PC + PV T S EDC D
Sbjct: 428 GVTGITCNRCAKGYQQ----SRSP---IAPCI-KIPVAPPTTAAS----SVEEPEDC--D 473
Query: 175 AYCHITQ-----NFARCCRK 189
+YC ++ N + CRK
Sbjct: 474 SYCKASKGKLKMNMKKYCRK 493
Score = 110 (43.8 bits), Expect = 0.00086, P = 0.00086
Identities = 27/72 (37%), Positives = 37/72 (51%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ +G+ C + T QC CK GV G+ C+RC GY S+ S AP I + +
Sbjct: 404 CDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQ-SR-SPIAPCIKIPVAPPTT 461
Query: 95 QFGSVRE--DCE 104
SV E DC+
Sbjct: 462 AASSVEEPEDCD 473
>RGD|619809 [details] [associations]
symbol:Ntn1 "netrin 1" species:10116 "Rattus norvegicus"
[GO:0001764 "neuron migration" evidence=ISO] [GO:0005576
"extracellular region" evidence=TAS] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=ISO] [GO:0007411 "axon guidance" evidence=ISO;NAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO] [GO:0016337 "cell-cell adhesion" evidence=ISO]
[GO:0030334 "regulation of cell migration" evidence=ISO]
[GO:0030517 "negative regulation of axon extension" evidence=ISO]
[GO:0030879 "mammary gland development" evidence=ISO] [GO:0033564
"anterior/posterior axon guidance" evidence=ISO] [GO:0040023
"establishment of nucleus localization" evidence=ISO] [GO:0042472
"inner ear morphogenesis" evidence=ISO] [GO:0045773 "positive
regulation of axon extension" evidence=ISO] [GO:0060603 "mammary
gland duct morphogenesis" evidence=ISO] InterPro:IPR001134
PROSITE:PS50189 RGD:619809 GO:GO:0005737 GO:GO:0006915
GO:GO:0007411 GO:GO:0001764 GO:GO:0008284 GO:GO:0005578
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
Reactome:REACT_127416 Reactome:REACT_96538 GO:GO:0016337
PROSITE:PS01186 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 HSSP:P02468 GO:GO:0030517 SMART:SM00643 GO:GO:0060603
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOVERGEN:HBG006464 CTD:9423 eggNOG:NOG244580 HOGENOM:HOG000286017
OrthoDB:EOG4H19V9 EMBL:AY028417 IPI:IPI00205229 UniGene:Rn.41052
ProteinModelPortal:Q924Z9 IntAct:Q924Z9 STRING:Q924Z9 PRIDE:Q924Z9
UCSC:RGD:619809 InParanoid:Q924Z9 NextBio:618675
ArrayExpress:Q924Z9 Genevestigator:Q924Z9 Uniprot:Q924Z9
Length = 604
Score = 132 (51.5 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 40/140 (28%), Positives = 58/140 (41%)
Query: 56 CKQGVGGLKCDRCEPGYW-GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKP 114
C+ G C C+ G++ + K ++ C C C G+ + C Q TG+C CK
Sbjct: 371 CRHNTAGRHCHYCKEGFYRDMGKPITHRK---ACKACDCHPVGAAGKTCNQTTGQCPCKD 427
Query: 115 GVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSD 174
GV G CN C ++ P + PC + PV T S EDC D
Sbjct: 428 GVTGITCNRCAKGYQQ----SRSP---IAPCI-KIPVAPPTTAAS----SMEEPEDC--D 473
Query: 175 AYCHITQ-----NFARCCRK 189
+YC ++ N + CRK
Sbjct: 474 SYCKASKGKLKMNMKKYCRK 493
>UNIPROTKB|F1LPC8 [details] [associations]
symbol:Ntn1 "Netrin-1" species:10116 "Rattus norvegicus"
[GO:0001764 "neuron migration" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0016337
"cell-cell adhesion" evidence=IEA] [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0030517 "negative regulation of axon
extension" evidence=IEA] [GO:0040023 "establishment of nucleus
localization" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0060603 "mammary gland duct morphogenesis"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 RGD:619809
GO:GO:0005737 GO:GO:0007411 GO:GO:0001764 GO:GO:0008284
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334 GO:GO:0016337
GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933 Pfam:PF01759
GO:GO:0030517 SMART:SM00643 GO:GO:0060603 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 KO:K06843 OMA:NCHTCDA IPI:IPI00205229
RefSeq:NP_446183.2 Ensembl:ENSRNOT00000005255 GeneID:114523
KEGG:rno:114523 ArrayExpress:F1LPC8 Uniprot:F1LPC8
Length = 604
Score = 132 (51.5 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 40/140 (28%), Positives = 58/140 (41%)
Query: 56 CKQGVGGLKCDRCEPGYW-GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKP 114
C+ G C C+ G++ + K ++ C C C G+ + C Q TG+C CK
Sbjct: 371 CRHNTAGRHCHYCKEGFYRDMGKPITHRK---ACKACDCHPVGAAGKTCNQTTGQCPCKD 427
Query: 115 GVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSD 174
GV G CN C ++ P + PC + PV T S EDC D
Sbjct: 428 GVTGITCNRCAKGYQQ----SRSP---IAPCI-KIPVAPPTTAAS----SMEEPEDC--D 473
Query: 175 AYCHITQ-----NFARCCRK 189
+YC ++ N + CRK
Sbjct: 474 SYCKASKGKLKMNMKKYCRK 493
>UNIPROTKB|H9L033 [details] [associations]
symbol:CELSR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0007266 "Rho protein signal transduction" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0032956 "regulation of actin cytoskeleton organization"
evidence=IEA] [GO:0042060 "wound healing" evidence=IEA] [GO:0042249
"establishment of planar polarity of embryonic epithelium"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0045176 "apical protein localization" evidence=IEA] [GO:0048105
"establishment of body hair planar orientation" evidence=IEA]
[GO:0060488 "orthogonal dichotomous subdivision of terminal units
involved in lung branching morphogenesis" evidence=IEA] [GO:0060489
"planar dichotomous subdivision of terminal units involved in lung
branching morphogenesis" evidence=IEA] [GO:0060490 "lateral
sprouting involved in lung morphogenesis" evidence=IEA] [GO:0090179
"planar cell polarity pathway involved in neural tube closure"
evidence=IEA] [GO:0090251 "protein localization involved in
establishment of planar polarity" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR017981 InterPro:IPR017983 Pfam:PF00002 Pfam:PF01825
Pfam:PF02793 PRINTS:PR00249 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 SMART:SM00008
SMART:SM00181 SMART:SM00303 GO:GO:0016021 GO:GO:0005886
GO:GO:0004930 GO:GO:0007218 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
InterPro:IPR022624 Pfam:PF12003 GeneTree:ENSGT00700000104170
Pfam:PF02210 EMBL:AADN02048668 EMBL:AADN02048669 EMBL:AADN02048670
EMBL:AADN02048671 EMBL:AADN02048672 EMBL:AADN02048673
Ensembl:ENSGALT00000021853 OMA:SERRWEL Uniprot:H9L033
Length = 1289
Score = 134 (52.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 77 KISSYAPDI-DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNG 135
K + Y P D C C C GS C+ TG+C CKPGV G +CN C +P ++ G
Sbjct: 244 KANYYRPQSSDTCYPCDCFPSGSHTRSCDMETGQCPCKPGVIGRQCNRCDNPFAEVTARG 303
Query: 136 C 136
C
Sbjct: 304 C 304
>UNIPROTKB|H0YAQ5 [details] [associations]
symbol:LAMA4 "Laminin subunit alpha-4" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 Pfam:PF06008 GO:GO:0030155
GO:GO:0030334 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0045995 GO:GO:0005606
EMBL:Z99289 EMBL:AL590106 HGNC:HGNC:6484 ChiTaRS:LAMA4
Ensembl:ENST00000521732 Uniprot:H0YAQ5
Length = 187
Score = 122 (48.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 31/100 (31%), Positives = 51/100 (51%)
Query: 33 STCG-CNKLGSTE-----DACIEDTEQCK-CKQGVGGLKCDRCEPGYWGLSKISSYAPDI 85
STC C+ G+++ + C E T QC+ C + G KC+RC PGY+G ++I+
Sbjct: 2 STCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPGYYGDARIAK----- 56
Query: 86 DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECL 125
C C C G C+ +TG C+ + + C++C+
Sbjct: 57 -NCAVCNCG--GG---PCDSVTGECLEEGFEPPTGCDKCV 90
>UNIPROTKB|F1PYQ8 [details] [associations]
symbol:MEGF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR011489
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
InterPro:IPR026823 Pfam:PF12662 Pfam:PF12661
GeneTree:ENSGT00690000101691 EMBL:AAEX03003878 EMBL:AAEX03003879
Ensembl:ENSCAFT00000030970 Uniprot:F1PYQ8
Length = 1573
Score = 134 (52.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 38/110 (34%), Positives = 47/110 (42%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGC 88
GC C C + + C T C C G GL C R C+ G WG PD
Sbjct: 826 GCQMRCSC----ANDGLCHPVTGHCSCAPGWTGLSCQRACDGGRWG--------PDCSH- 872
Query: 89 LKCGCSQ-FGSVREDCEQMTGRCVCKPGVKGSKCNE-CLDPNKKLGPNGC 136
C CS GS C+ ++G CVC+ G G +C + C P GP GC
Sbjct: 873 -PCTCSPGHGS----CDAVSGLCVCEAGYTGPRCEQRC--PQGHFGP-GC 914
Score = 133 (51.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 45/141 (31%), Positives = 59/141 (41%)
Query: 16 CPDNKTLAQGPD-NAGCPST---CGCNKL-GSTED--ACIEDTEQCKCKQGVGGLKC-DR 67
CP KT G D A CP GC ++ + E AC T C C+ G G +C D
Sbjct: 761 CPPGKT---GDDCGADCPEGRWGLGCQEICPACEHGAACEPGTGACLCRPGYVGSRCQDT 817
Query: 68 CEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
C G++G P GC ++C C+ G C +TG C C PG G C D
Sbjct: 818 CPAGWFG--------P---GCQMRCSCANDGL----CHPVTGHCSCAPGWTGLSCQRACD 862
Query: 127 PNKKLGPNGCMPGMEVKPCNG 147
+ GP+ C P +G
Sbjct: 863 GGR-WGPD-CSHPCTCSPGHG 881
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 44/127 (34%), Positives = 53/127 (41%)
Query: 16 CPDNKTLAQGPDNAGCPS-TCGCNKLGSTEDA---CIEDTEQCKCKQGVGGLKCDR-CEP 70
CP +G D CP+ T G N GS C T QC C G G C C
Sbjct: 719 CPAGYQ-GKGCDQE-CPAGTFGVNCSGSCYCGGAPCNRVTGQCLCPPGKTGDDCGADCPE 776
Query: 71 GYWGLSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNK 129
G WGL GC + C + G+ CE TG C+C+PG GS+C + P
Sbjct: 777 GRWGL-----------GCQEICPACEHGAA---CEPGTGACLCRPGYVGSRCQDTC-PAG 821
Query: 130 KLGPNGC 136
GP GC
Sbjct: 822 WFGP-GC 827
Score = 123 (48.4 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 55/197 (27%), Positives = 68/197 (34%)
Query: 8 CLDSWYGC-CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCD 66
C W G C + G C TC C G T C + C C +G GL C+
Sbjct: 1021 CGPGWMGSTCLE--ACPTGSYGQNCQHTCLCQH-GGT---CDPVSGHCTCPEGWTGLACE 1074
Query: 67 R-CEPGYWGLSKISSYAPDIDGCL-KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE- 123
C PG +G GC C C G DC++ +GRC+C G G +C
Sbjct: 1075 EECLPGRFGA-----------GCKHSCRCLNGG----DCDRRSGRCLCPAGWTGDQCQSL 1119
Query: 124 CLDPNKKLGPN---GCMPGMEVKPCNGE---PPVINLQTGVELDCGSG------ANREDC 171
C + + C G G PP + E C G A R C
Sbjct: 1120 CAEGTFGVRCEEHCACRRGATCHHVTGACLCPPGWR-GSRCENACPHGWFGEACAQRCQC 1178
Query: 172 PSDAYCHITQNFARCCR 188
P A CH RC R
Sbjct: 1179 PPGAACHHVTGECRCPR 1195
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 32/94 (34%), Positives = 44/94 (46%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGCL 89
C TC + G AC+ + C C +G GL C+ C P +G K S L
Sbjct: 521 CSLTCDDCRNGG---ACLPGLDGCDCPEGWTGLICNETCPPDTFG--KNCS--------L 567
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
CGC G+ C+ +TG C C PGV G++C +
Sbjct: 568 SCGCQNGGT----CDPVTGACRCPPGVGGTRCED 597
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 50/163 (30%), Positives = 64/163 (39%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGC- 88
C C C G+ AC T +C+C +G G C++ C PG +G + C
Sbjct: 1172 CAQRCQCPP-GA---ACHHVTGECRCPRGFTGPGCEQACPPGTFG-----------ESCG 1216
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPC--- 145
KC C G + C G CVC G GS C + P + GP GC +PC
Sbjct: 1217 QKCHCP--GE-NQACHPALGTCVCAAGYHGSGCRQRCPPGR-FGP-GCE-----QPCGCL 1266
Query: 146 NGEPPVINLQTGVELDCGSGANREDCP-SDAYCHITQNFARCC 187
NG + TG L C +G DC S H A C
Sbjct: 1267 NGGS--CDAATGACL-CPAGFLGADCSLSCPQGHFGPGCAHVC 1306
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 50/170 (29%), Positives = 72/170 (42%)
Query: 35 CGCNK-LGST--EDACIEDT--EQC--KCKQGVGGLKCDR------CEPGYWGLSKISSY 81
C C +G T ED C + +QC KC G +C R C+PG +G +
Sbjct: 584 CRCPPGVGGTRCEDGCPKGFYGKQCHKKCHCANRG-RCHRLYGACLCDPGLYGRFCHLAC 642
Query: 82 APDI--DGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKC-NECLDPNKKLGPNGCM 137
P GC + C C Q ++ C++ G C CK G +G +C +EC P GP GC+
Sbjct: 643 PPWAFGPGCSEECQCEQQNTLA--CDRRDGSCSCKAGFQGERCQDECA-PGF-FGP-GCL 697
Query: 138 -----P-GMEVKP----CNGEPPVINLQTGVELDCGSGANREDCPSDAYC 177
P G+ P C + P G + +C +G +C YC
Sbjct: 698 QACTCPQGVACDPISGQCEKQCPAGYQGKGCDQECPAGTFGVNCSGSCYC 747
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 57/193 (29%), Positives = 76/193 (39%)
Query: 8 CLDSWYGC-CPDNKTLAQGPDNAG--CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLK 64
C + W G C N+T PD G C +CGC G T C T C+C GVGG +
Sbjct: 543 CPEGWTGLIC--NETCP--PDTFGKNCSLSCGCQN-GGT---CDPVTGACRCPPGVGGTR 594
Query: 65 C-DRCEPGYWGLSKISSYAPDIDGCLKCG-CSQ-FGSVREDCEQMTGR-C--VCKPGVKG 118
C D C G++G C G C + +G+ D + GR C C P G
Sbjct: 595 CEDGCPKGFYGKQCHKKCH-----CANRGRCHRLYGACLCD-PGLYGRFCHLACPPWAFG 648
Query: 119 SKCNE---CLDPN-----KKLGPNGCMPGMEVKPCNGE-------PPVINLQT---GVEL 160
C+E C N ++ G C G + + C E P + T GV
Sbjct: 649 PGCSEECQCEQQNTLACDRRDGSCSCKAGFQGERCQDECAPGFFGPGCLQACTCPQGVAC 708
Query: 161 DCGSGANREDCPS 173
D SG + CP+
Sbjct: 709 DPISGQCEKQCPA 721
Score = 117 (46.2 bits), Expect = 0.00038, P = 0.00038
Identities = 43/144 (29%), Positives = 62/144 (43%)
Query: 7 SCLDSWYGCC-PDNKTLAQGPDNAG--CPSTC-------GCNKLGSTED--ACIEDTEQC 54
SC ++ G C P GP G C C GC + +C + QC
Sbjct: 1393 SCQNN--GTCEPTTGACRCGPGFYGQACQHACPPGFHGAGCRAACECQHGASCDPVSGQC 1450
Query: 55 KCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVC 112
C G G C++ CEPG +G +GC + C C + G+ C+ +TG+C+C
Sbjct: 1451 VCPAGFYGQLCEKGCEPGSFG-----------EGCREHCDC-EMGAA---CDPITGQCLC 1495
Query: 113 KPGVKGSKCNECLDPNKKLGPNGC 136
PG G+ C+ P+ GP GC
Sbjct: 1496 PPGRTGATCDLDCRPDF-FGP-GC 1517
Score = 116 (45.9 bits), Expect = 0.00050, P = 0.00050
Identities = 53/171 (30%), Positives = 66/171 (38%)
Query: 23 AQGPDNAGCPSTC-------GCNK-LGSTED-ACIEDTEQCKCKQGVGGLKCD-RCEPGY 72
A G +GC C GC + G +C T C C G G C C G+
Sbjct: 1238 AAGYHGSGCRQRCPPGRFGPGCEQPCGCLNGGSCDAATGACLCPAGFLGADCSLSCPQGH 1297
Query: 73 WGLSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE-CLDPNKK 130
+G P GC CGC Q +V C+ +TG C C PG G+ C C P +
Sbjct: 1298 FG--------P---GCAHVCGCGQ--AVT--CDPVTGSCACPPGTTGTHCEHGC--PQNR 1340
Query: 131 LGPNGCMPGMEVKPC-NGEPPVINLQTGVELDCG---SGANRED-CPSDAY 176
G N C V C NG + + G CG +G N E CP Y
Sbjct: 1341 FGVN-CE---HVCSCRNGG--LCHASDG-SCSCGLGWTGPNCEQACPPGHY 1384
>UNIPROTKB|F1PYQ7 [details] [associations]
symbol:MEGF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR011489
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
InterPro:IPR026823 Pfam:PF12662 Pfam:PF12661
GeneTree:ENSGT00690000101691 OMA:RIEMEVI EMBL:AAEX03003878
EMBL:AAEX03003879 Ensembl:ENSCAFT00000030971 Uniprot:F1PYQ7
Length = 1604
Score = 134 (52.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 38/110 (34%), Positives = 47/110 (42%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGC 88
GC C C + + C T C C G GL C R C+ G WG PD
Sbjct: 861 GCQMRCSC----ANDGLCHPVTGHCSCAPGWTGLSCQRACDGGRWG--------PDCSH- 907
Query: 89 LKCGCSQ-FGSVREDCEQMTGRCVCKPGVKGSKCNE-CLDPNKKLGPNGC 136
C CS GS C+ ++G CVC+ G G +C + C P GP GC
Sbjct: 908 -PCTCSPGHGS----CDAVSGLCVCEAGYTGPRCEQRC--PQGHFGP-GC 949
Score = 133 (51.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 45/141 (31%), Positives = 59/141 (41%)
Query: 16 CPDNKTLAQGPD-NAGCPST---CGCNKL-GSTED--ACIEDTEQCKCKQGVGGLKC-DR 67
CP KT G D A CP GC ++ + E AC T C C+ G G +C D
Sbjct: 796 CPPGKT---GDDCGADCPEGRWGLGCQEICPACEHGAACEPGTGACLCRPGYVGSRCQDT 852
Query: 68 CEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLD 126
C G++G P GC ++C C+ G C +TG C C PG G C D
Sbjct: 853 CPAGWFG--------P---GCQMRCSCANDGL----CHPVTGHCSCAPGWTGLSCQRACD 897
Query: 127 PNKKLGPNGCMPGMEVKPCNG 147
+ GP+ C P +G
Sbjct: 898 GGR-WGPD-CSHPCTCSPGHG 916
Score = 127 (49.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 44/127 (34%), Positives = 53/127 (41%)
Query: 16 CPDNKTLAQGPDNAGCPS-TCGCNKLGSTEDA---CIEDTEQCKCKQGVGGLKCDR-CEP 70
CP +G D CP+ T G N GS C T QC C G G C C
Sbjct: 754 CPAGYQ-GKGCDQE-CPAGTFGVNCSGSCYCGGAPCNRVTGQCLCPPGKTGDDCGADCPE 811
Query: 71 GYWGLSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNK 129
G WGL GC + C + G+ CE TG C+C+PG GS+C + P
Sbjct: 812 GRWGL-----------GCQEICPACEHGAA---CEPGTGACLCRPGYVGSRCQDTC-PAG 856
Query: 130 KLGPNGC 136
GP GC
Sbjct: 857 WFGP-GC 862
Score = 123 (48.4 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 55/197 (27%), Positives = 68/197 (34%)
Query: 8 CLDSWYGC-CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCD 66
C W G C + G C TC C G T C + C C +G GL C+
Sbjct: 1056 CGPGWMGSTCLE--ACPTGSYGQNCQHTCLCQH-GGT---CDPVSGHCTCPEGWTGLACE 1109
Query: 67 R-CEPGYWGLSKISSYAPDIDGCL-KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE- 123
C PG +G GC C C G DC++ +GRC+C G G +C
Sbjct: 1110 EECLPGRFGA-----------GCKHSCRCLNGG----DCDRRSGRCLCPAGWTGDQCQSL 1154
Query: 124 CLDPNKKLGPN---GCMPGMEVKPCNGE---PPVINLQTGVELDCGSG------ANREDC 171
C + + C G G PP + E C G A R C
Sbjct: 1155 CAEGTFGVRCEEHCACRRGATCHHVTGACLCPPGWR-GSRCENACPHGWFGEACAQRCQC 1213
Query: 172 PSDAYCHITQNFARCCR 188
P A CH RC R
Sbjct: 1214 PPGAACHHVTGECRCPR 1230
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 32/94 (34%), Positives = 44/94 (46%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGCL 89
C TC + G AC+ + C C +G GL C+ C P +G K S L
Sbjct: 556 CSLTCDDCRNGG---ACLPGLDGCDCPEGWTGLICNETCPPDTFG--KNCS--------L 602
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
CGC G+ C+ +TG C C PGV G++C +
Sbjct: 603 SCGCQNGGT----CDPVTGACRCPPGVGGTRCED 632
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 50/163 (30%), Positives = 64/163 (39%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGC- 88
C C C G+ AC T +C+C +G G C++ C PG +G + C
Sbjct: 1207 CAQRCQCPP-GA---ACHHVTGECRCPRGFTGPGCEQACPPGTFG-----------ESCG 1251
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPGMEVKPC--- 145
KC C G + C G CVC G GS C + P + GP GC +PC
Sbjct: 1252 QKCHCP--GE-NQACHPALGTCVCAAGYHGSGCRQRCPPGR-FGP-GCE-----QPCGCL 1301
Query: 146 NGEPPVINLQTGVELDCGSGANREDCP-SDAYCHITQNFARCC 187
NG + TG L C +G DC S H A C
Sbjct: 1302 NGGS--CDAATGACL-CPAGFLGADCSLSCPQGHFGPGCAHVC 1341
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 50/170 (29%), Positives = 72/170 (42%)
Query: 35 CGCNK-LGST--EDACIEDT--EQC--KCKQGVGGLKCDR------CEPGYWGLSKISSY 81
C C +G T ED C + +QC KC G +C R C+PG +G +
Sbjct: 619 CRCPPGVGGTRCEDGCPKGFYGKQCHKKCHCANRG-RCHRLYGACLCDPGLYGRFCHLAC 677
Query: 82 APDI--DGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKC-NECLDPNKKLGPNGCM 137
P GC + C C Q ++ C++ G C CK G +G +C +EC P GP GC+
Sbjct: 678 PPWAFGPGCSEECQCEQQNTLA--CDRRDGSCSCKAGFQGERCQDECA-PGF-FGP-GCL 732
Query: 138 -----P-GMEVKP----CNGEPPVINLQTGVELDCGSGANREDCPSDAYC 177
P G+ P C + P G + +C +G +C YC
Sbjct: 733 QACTCPQGVACDPISGQCEKQCPAGYQGKGCDQECPAGTFGVNCSGSCYC 782
Score = 118 (46.6 bits), Expect = 0.00029, P = 0.00029
Identities = 57/193 (29%), Positives = 76/193 (39%)
Query: 8 CLDSWYGC-CPDNKTLAQGPDNAG--CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLK 64
C + W G C N+T PD G C +CGC G T C T C+C GVGG +
Sbjct: 578 CPEGWTGLIC--NETCP--PDTFGKNCSLSCGCQN-GGT---CDPVTGACRCPPGVGGTR 629
Query: 65 C-DRCEPGYWGLSKISSYAPDIDGCLKCG-CSQ-FGSVREDCEQMTGR-C--VCKPGVKG 118
C D C G++G C G C + +G+ D + GR C C P G
Sbjct: 630 CEDGCPKGFYGKQCHKKCH-----CANRGRCHRLYGACLCD-PGLYGRFCHLACPPWAFG 683
Query: 119 SKCNE---CLDPN-----KKLGPNGCMPGMEVKPCNGE-------PPVINLQT---GVEL 160
C+E C N ++ G C G + + C E P + T GV
Sbjct: 684 PGCSEECQCEQQNTLACDRRDGSCSCKAGFQGERCQDECAPGFFGPGCLQACTCPQGVAC 743
Query: 161 DCGSGANREDCPS 173
D SG + CP+
Sbjct: 744 DPISGQCEKQCPA 756
Score = 117 (46.2 bits), Expect = 0.00038, P = 0.00038
Identities = 43/144 (29%), Positives = 62/144 (43%)
Query: 7 SCLDSWYGCC-PDNKTLAQGPDNAG--CPSTC-------GCNKLGSTED--ACIEDTEQC 54
SC ++ G C P GP G C C GC + +C + QC
Sbjct: 1428 SCQNN--GTCEPTTGACRCGPGFYGQACQHACPPGFHGAGCRAACECQHGASCDPVSGQC 1485
Query: 55 KCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVC 112
C G G C++ CEPG +G +GC + C C + G+ C+ +TG+C+C
Sbjct: 1486 VCPAGFYGQLCEKGCEPGSFG-----------EGCREHCDC-EMGAA---CDPITGQCLC 1530
Query: 113 KPGVKGSKCNECLDPNKKLGPNGC 136
PG G+ C+ P+ GP GC
Sbjct: 1531 PPGRTGATCDLDCRPDF-FGP-GC 1552
Score = 116 (45.9 bits), Expect = 0.00051, P = 0.00051
Identities = 53/171 (30%), Positives = 66/171 (38%)
Query: 23 AQGPDNAGCPSTC-------GCNK-LGSTED-ACIEDTEQCKCKQGVGGLKCD-RCEPGY 72
A G +GC C GC + G +C T C C G G C C G+
Sbjct: 1273 AAGYHGSGCRQRCPPGRFGPGCEQPCGCLNGGSCDAATGACLCPAGFLGADCSLSCPQGH 1332
Query: 73 WGLSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE-CLDPNKK 130
+G P GC CGC Q +V C+ +TG C C PG G+ C C P +
Sbjct: 1333 FG--------P---GCAHVCGCGQ--AVT--CDPVTGSCACPPGTTGTHCEHGC--PQNR 1375
Query: 131 LGPNGCMPGMEVKPC-NGEPPVINLQTGVELDCG---SGANRED-CPSDAY 176
G N C V C NG + + G CG +G N E CP Y
Sbjct: 1376 FGVN-CE---HVCSCRNGG--LCHASDG-SCSCGLGWTGPNCEQACPPGHY 1419
>UNIPROTKB|Q9NYQ6 [details] [associations]
symbol:CELSR1 "Cadherin EGF LAG seven-pass G-type receptor
1" species:9606 "Homo sapiens" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0007266 "Rho protein signal
transduction" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0032956 "regulation of actin
cytoskeleton organization" evidence=IEA] [GO:0042060 "wound
healing" evidence=IEA] [GO:0042249 "establishment of planar
polarity of embryonic epithelium" evidence=IEA] [GO:0042472 "inner
ear morphogenesis" evidence=IEA] [GO:0045176 "apical protein
localization" evidence=IEA] [GO:0048105 "establishment of body hair
planar orientation" evidence=IEA] [GO:0060488 "orthogonal
dichotomous subdivision of terminal units involved in lung
branching morphogenesis" evidence=IEA] [GO:0060489 "planar
dichotomous subdivision of terminal units involved in lung
branching morphogenesis" evidence=IEA] [GO:0060490 "lateral
sprouting involved in lung morphogenesis" evidence=IEA] [GO:0090179
"planar cell polarity pathway involved in neural tube closure"
evidence=IEA] [GO:0090251 "protein localization involved in
establishment of planar polarity" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=NAS]
[GO:0005887 "integral to plasma membrane" evidence=TAS] [GO:0007417
"central nervous system development" evidence=NAS;TAS] [GO:0004930
"G-protein coupled receptor activity" evidence=NAS] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=TAS] [GO:0046983
"protein dimerization activity" evidence=NAS] [GO:0001736
"establishment of planar polarity" evidence=ISS] [GO:0001843
"neural tube closure" evidence=ISS] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008 Pfam:PF00028
Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS00649 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00008 SMART:SM00112 SMART:SM00181 SMART:SM00303
InterPro:IPR000152 GO:GO:0001764 GO:GO:0005887 GO:GO:0009952
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 GO:GO:0007626
GO:GO:0007417 GO:GO:0046983 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0042472 GO:GO:0001942 PROSITE:PS01186
GO:GO:0007266 GO:GO:0001843 eggNOG:NOG12793 GO:GO:0042060
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0032956 GO:GO:0001736 GO:GO:0007156
SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003 MIM:182940
Gene3D:2.60.40.60 GO:GO:0045176 Pfam:PF02210 EMBL:AF231024
EMBL:AL031588 EMBL:AL031597 EMBL:AL021392 EMBL:BC000059
IPI:IPI00003384 IPI:IPI00874160 RefSeq:NP_055061.1
UniGene:Hs.252387 ProteinModelPortal:Q9NYQ6 SMR:Q9NYQ6
IntAct:Q9NYQ6 MINT:MINT-1413345 STRING:Q9NYQ6 PhosphoSite:Q9NYQ6
DMDM:22095551 PaxDb:Q9NYQ6 PRIDE:Q9NYQ6 Ensembl:ENST00000262738
GeneID:9620 KEGG:hsa:9620 UCSC:uc003bhw.1 CTD:9620
GeneCards:GC22M046755 HGNC:HGNC:1850 MIM:604523 neXtProt:NX_Q9NYQ6
PharmGKB:PA26393 HOGENOM:HOG000231346 HOVERGEN:HBG050887 KO:K04600
OMA:NKPNIGH OrthoDB:EOG4KKZ23 ChiTaRS:CELSR1 GenomeRNAi:9620
NextBio:36101 ArrayExpress:Q9NYQ6 Bgee:Q9NYQ6 CleanEx:HS_CELSR1
Genevestigator:Q9NYQ6 GermOnline:ENSG00000075275 GO:GO:0048105
GO:GO:0042249 GO:GO:0060490 GO:GO:0060488 GO:GO:0090179
GO:GO:0060489 GO:GO:0090251 Uniprot:Q9NYQ6
Length = 3014
Score = 134 (52.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 23/51 (45%), Positives = 29/51 (56%)
Query: 86 DGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGC 136
D CL C C GS C+ TG+C CKPGV G +CN C +P ++ GC
Sbjct: 1998 DTCLPCDCFPHGSHSRTCDMATGQCACKPGVIGRQCNRCDNPFAEVTTLGC 2048
Score = 40 (19.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 54 CKCKQGVGGLKCDRCEP 70
C+C GG C++ P
Sbjct: 1673 CECPLRFGGKNCEQAMP 1689
>UNIPROTKB|I3LV27 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 GO:GO:0005606 EMBL:CU993814
Ensembl:ENSSSCT00000024191 Uniprot:I3LV27
Length = 1668
Score = 134 (52.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 47/171 (27%), Positives = 66/171 (38%)
Query: 14 GCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGY 72
GC P +G C C C+ G + + C + + C C+ G C+RC+ GY
Sbjct: 58 GCSPGYYRDNKGFYTGRCVP-CNCH--GHS-NRCKDGSGICINCQHNTAGEHCERCKEGY 113
Query: 73 WGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTG--RCVCKPGVKGSKCNECL----- 125
+G + S C C C S C G RC+CKPG G+ C C
Sbjct: 114 YGNAIHGS-------CQACLCPHSNSFATGCIVTGGNMRCLCKPGYTGTLCERCAPGYFG 166
Query: 126 DPNKKLG---PNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPS 173
+P K G P C ++ C +P + D G G +DC S
Sbjct: 167 NPQKFGGSCQPCNCNSNGQLVSC--DPLTGDCMNQEPKDSGPGEECDDCDS 215
>MGI|MGI:2147749 [details] [associations]
symbol:Atrnl1 "attractin like 1" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005575
"cellular_component" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IPI] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030246
"carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR015915
Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041 SMART:SM00034
SMART:SM00181 MGI:MGI:2147749 GO:GO:0016021 GO:GO:0005886
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 PROSITE:PS00615 GO:GO:0007186
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 HSSP:P02468 CTD:26033 eggNOG:NOG242225
HOVERGEN:HBG004312 OMA:YTQQKVS OrthoDB:EOG4QC14F ChiTaRS:ATRNL1
InterPro:IPR013111 InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
EMBL:AY688677 EMBL:AK172967 EMBL:AK050882 EMBL:AK147492
EMBL:BC030872 EMBL:BC050020 IPI:IPI00462742 IPI:IPI00874371
IPI:IPI00895221 RefSeq:NP_852080.3 UniGene:Mm.245340
ProteinModelPortal:Q6A051 SMR:Q6A051 STRING:Q6A051
PhosphoSite:Q6A051 PaxDb:Q6A051 PRIDE:Q6A051
Ensembl:ENSMUST00000077282 GeneID:226255 KEGG:mmu:226255
UCSC:uc008iai.2 UCSC:uc008iaj.1 GeneTree:ENSGT00390000001118
HOGENOM:HOG000231727 InParanoid:Q6A051 NextBio:378084 Bgee:Q6A051
Genevestigator:Q6A051 Uniprot:Q6A051
Length = 1378
Score = 133 (51.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 35/104 (33%), Positives = 47/104 (45%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG-CL 89
CP+ C CN G + CI + +CK G +C C PGY+G P G C
Sbjct: 1010 CPA-CQCN--GHS--TCINNNVCEQCKNLTTGRQCQECMPGYYG-------DPTNGGQCT 1057
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKP-GVKGSKCNECLDPNKKLG 132
C C +V C TG+C C G+KG +C C N+ +G
Sbjct: 1058 ACTCGGHANV---CHLHTGKCFCTTKGIKGDQCQLCDSENRYVG 1098
Score = 35 (17.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 1 SGIYLKSCLDSWYGCCPD 18
+G L C DSW G PD
Sbjct: 263 TGEKLCVCNDSWQG--PD 278
>UNIPROTKB|F1SBB3 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
GO:GO:0005606 EMBL:CU993814 Ensembl:ENSSSCT00000004108 OMA:RAANQSS
Uniprot:F1SBB3
Length = 1724
Score = 134 (52.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 47/171 (27%), Positives = 66/171 (38%)
Query: 14 GCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQC-KCKQGVGGLKCDRCEPGY 72
GC P +G C C C+ G + + C + + C C+ G C+RC+ GY
Sbjct: 58 GCSPGYYRDNKGFYTGRCVP-CNCH--GHS-NRCKDGSGICINCQHNTAGEHCERCKEGY 113
Query: 73 WGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTG--RCVCKPGVKGSKCNECL----- 125
+G + S C C C S C G RC+CKPG G+ C C
Sbjct: 114 YGNAIHGS-------CQACLCPHSNSFATGCIVTGGNMRCLCKPGYTGTLCERCAPGYFG 166
Query: 126 DPNKKLG---PNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPS 173
+P K G P C ++ C +P + D G G +DC S
Sbjct: 167 NPQKFGGSCQPCNCNSNGQLVSC--DPLTGDCMNQEPKDSGPGEECDDCDS 215
>UNIPROTKB|E1BJ11 [details] [associations]
symbol:CELSR2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0021591 "ventricular system development" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001368
InterPro:IPR001879 InterPro:IPR001881 InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR017981 InterPro:IPR020894
Pfam:PF00002 Pfam:PF00008 Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205
PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50221
PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008
SMART:SM00112 SMART:SM00179 SMART:SM00181 SMART:SM00208
SMART:SM00303 InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886
GO:GO:0001764 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 OMA:YILRAYA
EMBL:DAAA02007576 IPI:IPI00711984 Ensembl:ENSBTAT00000025033
Uniprot:E1BJ11
Length = 2918
Score = 127 (49.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 22/54 (40%), Positives = 30/54 (55%)
Query: 83 PDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGC 136
P CL C C GS+ C+ G+C CKPGV G +C+ C +P ++ NGC
Sbjct: 1911 PGSPACLLCDCYPTGSLSRVCDPEEGQCPCKPGVIGRQCDRCDNPFAEVTTNGC 1964
Score = 53 (23.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 30 GCPS---TCGCNKLGSTEDACIE--DTEQCKCKQGVGGLKC 65
GCP+ C N + C+ D C+C G GG C
Sbjct: 1565 GCPAKKNVCDSNSCHNG-GTCVNQWDAFSCECPLGFGGKSC 1604
>RGD|69237 [details] [associations]
symbol:Celsr2 "cadherin, EGF LAG seven-pass G-type receptor 2"
species:10116 "Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=ISO] [GO:0003341 "cilium movement" evidence=ISO]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0007156 "homophilic cell adhesion"
evidence=IEA;ISO] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEP]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016055 "Wnt
receptor signaling pathway" evidence=ISO] [GO:0021591 "ventricular
system development" evidence=ISO] [GO:0021999 "neural plate
anterior/posterior regionalization" evidence=ISO] [GO:0022407
"regulation of cell-cell adhesion" evidence=IMP] [GO:0032880
"regulation of protein localization" evidence=ISO] [GO:0033326
"cerebrospinal fluid secretion" evidence=ISO] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001368 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS00649 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00008 SMART:SM00112 SMART:SM00179 SMART:SM00181
SMART:SM00208 SMART:SM00303 InterPro:IPR000152 RGD:69237
GO:GO:0016021 GO:GO:0005886 GO:GO:0001764 GO:GO:0004930
GO:GO:0007218 GO:GO:0005509 GO:GO:0007283 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0048813 PROSITE:PS01186
GO:GO:0022407 eggNOG:NOG12793 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS00010
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0007156
SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
Pfam:PF02210 HOGENOM:HOG000231346 HOVERGEN:HBG050887 EMBL:AB011529
IPI:IPI00373409 UniGene:Rn.222746 ProteinModelPortal:Q9QYP2
STRING:Q9QYP2 PhosphoSite:Q9QYP2 PRIDE:Q9QYP2 UCSC:RGD:69237
InParanoid:Q9QYP2 ArrayExpress:Q9QYP2 Genevestigator:Q9QYP2
GermOnline:ENSRNOG00000020058 Uniprot:Q9QYP2
Length = 2144
Score = 126 (49.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 22/54 (40%), Positives = 30/54 (55%)
Query: 83 PDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGC 136
P CL C C GS+ C+ G+C CKPGV G +C+ C +P ++ NGC
Sbjct: 1141 PSSPTCLLCDCYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPFAEVTTNGC 1194
Score = 52 (23.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 30 GCPS---TCGCNKLGSTEDACIE--DTEQCKCKQGVGGLKC 65
GCP+ C N + C+ D C+C G GG C
Sbjct: 795 GCPTKKNVCDSNTCHNG-GTCVNQWDAFSCECPLGFGGKSC 834
>ZFIN|ZDB-GENE-070122-2 [details] [associations]
symbol:celsr2 "cadherin, EGF LAG seven-pass G-type
receptor 2" species:7955 "Danio rerio" [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0007156
"homophilic cell adhesion" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA;IDA] [GO:0007166 "cell surface receptor signaling
pathway" evidence=IEA] [GO:0021754 "facial nucleus development"
evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IGI;IDA;IMP] [GO:0055113 "epiboly involved in gastrulation
with mouth forming second" evidence=IGI] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0008104 "protein localization"
evidence=IGI] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001879 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008 Pfam:PF00028
Pfam:PF01825 PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00112 SMART:SM00179 SMART:SM00181 SMART:SM00303
ZFIN:ZDB-GENE-070122-2 GO:GO:0016021 GO:GO:0005886 GO:GO:0008104
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0016337 PROSITE:PS01186
eggNOG:NOG12793 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007156 GO:GO:0055113 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60 Pfam:PF02210
HOGENOM:HOG000231346 HOVERGEN:HBG050887 OrthoDB:EOG4KKZ23 CTD:1952
KO:K04601 GO:GO:0021754 EMBL:AB246774 IPI:IPI00502412
RefSeq:NP_001074046.1 UniGene:Dr.110394 ProteinModelPortal:A0JBX1
STRING:A0JBX1 GeneID:560426 KEGG:dre:560426 InParanoid:A0JBX1
NextBio:20883440 Uniprot:A0JBX1
Length = 2941
Score = 135 (52.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 37/133 (27%), Positives = 60/133 (45%)
Query: 4 YLKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGL 63
Y SC +++G + KT P +CG +T+ D + C + G
Sbjct: 1921 YTCSCPSNYFGQYCEKKTDLPCPRGWWGEKSCGPCNCDTTKGF---DAD---CNKTNGA- 1973
Query: 64 KCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE 123
C RC+ ++ P D C+ C C GS+ C++ G+C CKPGV G +C+
Sbjct: 1974 -C-RCKDNHFR-------PPSSDTCVLCDCYAVGSLSRVCDRAVGQCQCKPGVIGRQCDR 2024
Query: 124 CLDPNKKLGPNGC 136
C +P ++ +GC
Sbjct: 2025 CDNPFAEVSSSGC 2037
>MGI|MGI:1919351 [details] [associations]
symbol:Megf6 "multiple EGF-like-domains 6" species:10090
"Mus musculus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005576
"extracellular region" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011489 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51041
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 MGI:MGI:1919351
GO:GO:0005576 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 EMBL:AL627123 InterPro:IPR013111
Pfam:PF07974 InterPro:IPR026823 Pfam:PF12662
GeneTree:ENSGT00690000101691 CTD:1953 HOGENOM:HOG000097840
HOVERGEN:HBG079790 EMBL:BC031402 EMBL:BC039980 EMBL:BC058571
IPI:IPI00676714 RefSeq:NP_001156449.1 UniGene:Mm.275216
ProteinModelPortal:Q80V70 SMR:Q80V70 STRING:Q80V70
PhosphoSite:Q80V70 PRIDE:Q80V70 Ensembl:ENSMUST00000030897
GeneID:230971 KEGG:mmu:230971 UCSC:uc008wbp.2 InParanoid:Q80V70
OrthoDB:EOG4CZBF1 ChiTaRS:MEGF6 NextBio:380326 Bgee:Q80V70
CleanEx:MM_MEGF6 Genevestigator:Q80V70
GermOnline:ENSMUSG00000057751 Uniprot:Q80V70
Length = 1572
Score = 133 (51.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 35/109 (32%), Positives = 50/109 (45%)
Query: 30 GCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGC 88
GC C C + + C T +C C G GL C R C+ G+WG PD C
Sbjct: 827 GCQMRCAC----ANDGHCHPATGRCSCAPGWTGLSCQRACDSGHWG--------PD---C 871
Query: 89 LK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGC 136
+ C CS G +C+ ++G C+C+ G +G +C + GP GC
Sbjct: 872 IHPCNCSA-G--HGNCDAVSGLCLCEAGYEGPQCEQWCRQGY-FGP-GC 915
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 53/196 (27%), Positives = 73/196 (37%)
Query: 1 SGIYLKSCLDSWYGC-CPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQG 59
+G+Y K+C S C C + + CP G L + E+ C+ C+
Sbjct: 1037 AGLYGKNCQHS---CLCRNGGSCDPILGQCTCPE--GWTGL-ACENECLPGHHGAGCRLN 1090
Query: 60 ---VGGLKCDR----CE-PGYWGLSKISSYAPDIDGCLKCGCSQFGSVRED--CEQMTGR 109
+ G CDR C P W K S P + G C + + R+ C +TG
Sbjct: 1091 CSCLNGGTCDRLTGHCRCPAGWTGDKCQS--PCVSGMFGVHCEEHCACRKGATCHHVTGA 1148
Query: 110 CVCKPGVKGSKCNECLDPNKKLGPN-----GCMPGMEVKPCNGE---PPVINLQTGVELD 161
C+C PG +GS C + P G C PG +GE PP G E
Sbjct: 1149 CLCPPGWRGSHCEQAC-PRGWFGEACAQRCHCPPGASCHHVSGECHCPPGFT-GPGCEQA 1206
Query: 162 CGSGANREDCPSDAYC 177
C G +DC C
Sbjct: 1207 CQPGTFGKDCEHPCQC 1222
Score = 125 (49.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 55/197 (27%), Positives = 68/197 (34%)
Query: 8 CLDSWYG-CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCD 66
C W G C + G C +C C GS C QC C +G GL C+
Sbjct: 1022 CAPGWMGPTCL--QACPAGLYGKNCQHSCLCRNGGS----CDPILGQCTCPEGWTGLACE 1075
Query: 67 R-CEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNE- 123
C PG+ G GC L C C G+ C+++TG C C G G KC
Sbjct: 1076 NECLPGHHGA-----------GCRLNCSCLNGGT----CDRLTGHCRCPAGWTGDKCQSP 1120
Query: 124 CLDPNKKLGPN-----GCMPGMEVKPCNGE---PPVINLQTGVELDCGSG------ANRE 169
C+ + G + C G G PP + E C G A R
Sbjct: 1121 CV--SGMFGVHCEEHCACRKGATCHHVTGACLCPPGWR-GSHCEQACPRGWFGEACAQRC 1177
Query: 170 DCPSDAYCHITQNFARC 186
CP A CH C
Sbjct: 1178 HCPPGASCHHVSGECHC 1194
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 60/201 (29%), Positives = 77/201 (38%)
Query: 7 SCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKC- 65
SC W G ++ A G A C C C GS C + C C G G C
Sbjct: 1366 SCPLGWMGPHCEHACPA-GRYGAACLLECSCQNNGS----CEPTSGACLCGPGFYGQACE 1420
Query: 66 DRCEPGYWG-----LSKISSYAP-D-IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKG 118
D C G+ G + + AP D + G +C C G + CE+ G CKPG G
Sbjct: 1421 DTCPAGFHGSGCQRVCECQQGAPCDPVSG--RCLCPA-GFRGQFCER--G---CKPGFFG 1472
Query: 119 SKC-NECLDPNK-KLGP-NG---CMPGMEVKPCNGEPPVINLQTGVEL--DCGSGANRED 170
C +C P P +G C PG C+ + G L DCG GA D
Sbjct: 1473 DGCLQQCNSPTGVPCDPISGLCLCPPGRAGTTCDLDCRRGRFGPGCALRCDCGGGA---D 1529
Query: 171 C-PSDAYCHITQNFAR-CCRK 189
C P CH ++ CR+
Sbjct: 1530 CDPISGQCHCVDSYTGPTCRE 1550
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 49/168 (29%), Positives = 58/168 (34%)
Query: 24 QGPD-NAGCP-STCGCNKLGSTEDA---CIEDTEQCKCKQGVGGLKCDR-CEPGYWGLSK 77
QG D CP T G N GS C T +C C G G C C G WGL
Sbjct: 725 QGEDCGQECPVGTFGVNCSGSCSCVGAPCHRVTGECLCPPGKTGEDCGADCPEGRWGL-- 782
Query: 78 ISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPN-- 134
GC + C + G+ C+ TG C+C PG GS+C + P G
Sbjct: 783 ---------GCQEICPACEHGA---SCDPETGTCLCLPGFVGSRCQDAC-PAGWFGTGCQ 829
Query: 135 ---GCMPGMEVKPCNGEPPVINLQTGVELD--CGSGANREDCPSDAYC 177
C P G TG+ C SG DC C
Sbjct: 830 MRCACANDGHCHPATGRCSCAPGWTGLSCQRACDSGHWGPDCIHPCNC 877
Score = 116 (45.9 bits), Expect = 0.00049, P = 0.00049
Identities = 52/190 (27%), Positives = 72/190 (37%)
Query: 7 SCLDSWYGC-CPDNKTLAQGPDNAGCP-STCG--CNK--LGSTEDACIEDTEQCKCKQGV 60
+C GC CP+ T N CP T G C+ + C + C+C GV
Sbjct: 534 TCFPGLDGCDCPEGWTGIIC--NETCPPDTFGKNCSSPCICQNGGTCDPVSGACRCPPGV 591
Query: 61 GGLKC-DRCEPGYWGLSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKG 118
G C D C G++G C K C C+ G C ++ G C+C PG+ G
Sbjct: 592 SGAHCEDGCPKGFYGKH-----------CRKKCHCANRGR----CHRLYGACLCDPGLYG 636
Query: 119 SKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSDAYCH 178
C+ P GP GC + + N + G C +G E C +A C
Sbjct: 637 RFCHLACPP-WAFGP-GCSEDCLCEQSHTRS--CNSKDG-SCSCKAGFQGERC--EAECE 689
Query: 179 ITQNFARCCR 188
+F CR
Sbjct: 690 -PGSFGPGCR 698
>UNIPROTKB|J9NZ15 [details] [associations]
symbol:CELSR3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001879 InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR017981 InterPro:IPR017983
InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008 Pfam:PF00028
Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS00650 PROSITE:PS50026 PROSITE:PS50221
PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008
SMART:SM00112 SMART:SM00181 SMART:SM00303 GO:GO:0016021
GO:GO:0005886 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624
Pfam:PF12003 Gene3D:2.60.40.60 GeneTree:ENSGT00700000104170
Pfam:PF02210 OMA:DGRRVDM EMBL:AAEX03012233
Ensembl:ENSCAFT00000042870 Uniprot:J9NZ15
Length = 3323
Score = 128 (50.1 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 22/57 (38%), Positives = 29/57 (50%)
Query: 81 YAPD-IDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGC 136
Y P D CL C C GS C +G+C C+PG G +CN C P ++ +GC
Sbjct: 2066 YRPQGSDSCLPCDCYPVGSTSRSCAPHSGQCPCRPGALGRQCNSCDSPFAEVTASGC 2122
Score = 46 (21.3 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 50 DTEQCK----CKQGVGGLKCDRCEPGYWG 74
D+ CK C + GG CD C G+ G
Sbjct: 1727 DSGPCKNSGFCSERWGGFSCD-CPVGFGG 1754
Score = 41 (19.5 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 14 GCCPDNKTLAQGPDNAGCPSTCGCNKLGSTE 44
G C + T A GPD C C G+ E
Sbjct: 1482 GICRNGGTCADGPDGG---FRCQCPAGGAFE 1509
Score = 37 (18.1 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 6/12 (50%), Positives = 6/12 (50%)
Query: 54 CKCKQGVGGLKC 65
C C G GG C
Sbjct: 1746 CDCPVGFGGKDC 1757
>RGD|1306013 [details] [associations]
symbol:Scarf2 "scavenger receptor class F, member 2"
species:10116 "Rattus norvegicus" [GO:0005044 "scavenger receptor
activity" evidence=IEA;ISO] [GO:0007157 "heterophilic cell-cell
adhesion" evidence=IEA;ISO] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 RGD:1306013 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007157 InterPro:IPR009030 SUPFAM:SSF57184 GO:GO:0005044
GeneTree:ENSGT00690000101691 EMBL:CH473999 CTD:91179 OMA:NVCRAPG
OrthoDB:EOG4QJRMT IPI:IPI00569553 RefSeq:NP_001099334.1
UniGene:Rn.22134 Ensembl:ENSRNOT00000000313 GeneID:287949
KEGG:rno:287949 NextBio:627284 Uniprot:D3ZBQ5
Length = 833
Score = 131 (51.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 51/190 (26%), Positives = 73/190 (38%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCD-RCEPGYW 73
CC + L D G + C N S + C+ E C+C+ G G CD +C +W
Sbjct: 56 CCAGWRQLG---DECGI-AVCEGNSTCSENEVCVRPGE-CRCRHGYFGANCDTKCPRQFW 110
Query: 74 GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN---ECLDP--N 128
G PD +C C G CE +TG+C C G++C +C +
Sbjct: 111 G--------PDCKE--RCSCHPHGQ----CEDVTGQCTCHARRWGARCEHACQCQHGTCH 156
Query: 129 KKLGPNGCMPGMEVKPCNGE-----PPVINLQTGVELDCGSGANREDCPSDAYCHIT--- 180
+ G C PG C + QTG L C +G C + C+ +
Sbjct: 157 PRSGACRCEPGWWGAQCASACYCSATSRCDPQTGACL-CHAGWWGRSCNNQCSCNSSPCE 215
Query: 181 QNFARC-CRK 189
Q RC CR+
Sbjct: 216 QQSGRCQCRE 225
Score = 119 (46.9 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 37/124 (29%), Positives = 50/124 (40%)
Query: 8 CLDSWYGCCPDNKTLAQ--GPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKC 65
C ++G D K Q GPD C C C+ G ED T QC C G +C
Sbjct: 92 CRHGYFGANCDTKCPRQFWGPD---CKERCSCHPHGQCEDV----TGQCTCHARRWGARC 144
Query: 66 D---RCEPGYWG-LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
+ +C+ G S P G +C + + S C+ TG C+C G G C
Sbjct: 145 EHACQCQHGTCHPRSGACRCEPGWWGA-QCASACYCSATSRCDPQTGACLCHAGWWGRSC 203
Query: 122 N-EC 124
N +C
Sbjct: 204 NNQC 207
>MGI|MGI:2178743 [details] [associations]
symbol:Stab2 "stabilin 2" species:10090 "Mus musculus"
[GO:0005041 "low-density lipoprotein receptor activity"
evidence=ISO] [GO:0005044 "scavenger receptor activity"
evidence=ISO] [GO:0005540 "hyaluronic acid binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=ISO] [GO:0006897 "endocytosis" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030169
"low-density lipoprotein particle binding" evidence=ISO]
[GO:0042742 "defense response to bacterium" evidence=ISO]
[GO:0051635 "bacterial cell surface binding" evidence=ISO]
[GO:0051636 "Gram-negative bacterial cell surface binding"
evidence=ISO] InterPro:IPR000538 InterPro:IPR000742 Pfam:PF00193
PROSITE:PS01241 PROSITE:PS50026 PROSITE:PS50963 SMART:SM00181
SMART:SM00445 Pfam:PF02469 MGI:MGI:2178743 InterPro:IPR000782
GO:GO:0005737 GO:GO:0005887 GO:GO:0009897 GO:GO:0042742
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0006897 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0030169 eggNOG:COG2335 Gene3D:2.30.180.10 SMART:SM00554
SUPFAM:SSF82153 PROSITE:PS50213 GO:GO:0051636 GO:GO:0005044
GO:GO:0005540 GO:GO:0005041 InterPro:IPR024731 Pfam:PF12947
Gene3D:2.40.155.10 InterPro:IPR023413 GeneTree:ENSGT00690000101914
HOGENOM:HOG000154436 HOVERGEN:HBG079218 CTD:55576 OMA:IPKCCKG
OrthoDB:EOG4QNMV8 EMBL:AF364951 EMBL:AK034522 IPI:IPI00467600
RefSeq:NP_619614.1 UniGene:Mm.279611 ProteinModelPortal:Q8R4U0
SMR:Q8R4U0 STRING:Q8R4U0 PhosphoSite:Q8R4U0 PaxDb:Q8R4U0
PRIDE:Q8R4U0 Ensembl:ENSMUST00000035288 GeneID:192188
KEGG:mmu:192188 UCSC:uc007gqo.1 InParanoid:Q8R4U0 NextBio:371202
Bgee:Q8R4U0 CleanEx:MM_STAB2 Genevestigator:Q8R4U0
GermOnline:ENSMUSG00000035459 Uniprot:Q8R4U0
Length = 2559
Score = 134 (52.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 34/99 (34%), Positives = 44/99 (44%)
Query: 26 PDNAGCPS--TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAP 83
PD CP CN G D + T QC+C G G C+ C PG +G P
Sbjct: 1965 PDCQACPGGPDTPCNNRGMCYDQ-YKPTGQCQCHTGFNGTACELCLPGRFG--------P 2015
Query: 84 DIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN 122
D C CGCS+ G E +G+C+C+ G G C+
Sbjct: 2016 D---CQPCGCSEHGQCDEGITG-SGQCLCEAGWTGRFCD 2050
>UNIPROTKB|F1MZD0 [details] [associations]
symbol:F1MZD0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR011398 InterPro:IPR018097 Pfam:PF00008 Pfam:PF07645
PIRSF:PIRSF036312 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 GO:GO:0005578 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010
InterPro:IPR026823 Pfam:PF12662 GO:GO:0005201 InterPro:IPR024731
Pfam:PF12947 GeneTree:ENSGT00700000104076 Gene3D:3.90.290.10
InterPro:IPR017878 PANTHER:PTHR24039:SF0 Pfam:PF00683
SUPFAM:SSF57581 PROSITE:PS51364 OMA:SVSCMNG EMBL:DAAA02019509
EMBL:DAAA02019510 IPI:IPI00999905 Ensembl:ENSBTAT00000035613
Uniprot:F1MZD0
Length = 2896
Score = 134 (52.2 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 43/145 (29%), Positives = 61/145 (42%)
Query: 5 LKSCLDSWYGCCPDNKTLAQGPDNAGCPSTCGCNKLG-STEDA--CIEDTEQCK---CKQ 58
L C +GC P L P + C G + G S ED C E+ C+ C
Sbjct: 1405 LDECASKEHGCSPRADCL-NAPGSYRCACRLGFSGDGFSCEDRDECAENVALCENGQCLN 1463
Query: 59 GVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTG--RCVCKPGV 116
GG +C+ CE G+ +K D+D C+ FGS CE + G RC+C G
Sbjct: 1464 VPGGYRCE-CEMGF-SPTKDQHACQDVDECVLRNICVFGS----CENLPGMFRCICDEGY 1517
Query: 117 KGSKCN-ECLDPNKKLGPNGCMPGM 140
+ + C D N+ P C+ G+
Sbjct: 1518 ELDRGGGNCTDVNECADPVNCINGL 1542
>UNIPROTKB|Q5VY43 [details] [associations]
symbol:PEAR1 "Platelet endothelial aggregation receptor 1"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
[GO:0043654 "recognition of apoptotic cell" evidence=IEA]
InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00181 GO:GO:0016021 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0001891 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 EMBL:AL356104 HOGENOM:HOG000294130
Pfam:PF12661 GO:GO:0043654 EMBL:AL158169 HOVERGEN:HBG108333
EMBL:AK074121 IPI:IPI00154858 RefSeq:NP_001073940.1
UniGene:Hs.142003 HSSP:P01133 ProteinModelPortal:Q5VY43 SMR:Q5VY43
IntAct:Q5VY43 STRING:Q5VY43 PhosphoSite:Q5VY43 DMDM:74757035
PRIDE:Q5VY43 DNASU:375033 Ensembl:ENST00000292357
Ensembl:ENST00000338302 GeneID:375033 KEGG:hsa:375033
UCSC:uc001fqj.1 CTD:375033 GeneCards:GC01P156865 H-InvDB:HIX0001178
HGNC:HGNC:33631 HPA:HPA035217 MIM:610278 neXtProt:NX_Q5VY43
PharmGKB:PA162399233 eggNOG:NOG320509 InParanoid:Q5VY43 OMA:PPGTWGF
OrthoDB:EOG451DPW GenomeRNAi:375033 NextBio:100378
ArrayExpress:Q5VY43 Bgee:Q5VY43 CleanEx:HS_PEAR1
Genevestigator:Q5VY43 Uniprot:Q5VY43
Length = 1037
Score = 131 (51.2 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 38/108 (35%), Positives = 46/108 (42%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKC-DR-CEPGYWGLSKISSYAPDIDGC 88
C TC C + + C C C+ G G +C DR C G++GLS AP
Sbjct: 315 CAETCDC----APDARCFPANGACLCEHGFTGDRCTDRLCPDGFYGLS---CQAP----- 362
Query: 89 LKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGC 136
C C + S+ C M G C C PG G CNE P GP GC
Sbjct: 363 --CTCDREHSL--SCHPMNGECSCLPGWAGLHCNESC-PQDTHGP-GC 404
Score = 124 (48.7 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 38/140 (27%), Positives = 52/140 (37%)
Query: 45 DACIEDTEQCKCKQGVGGLKCD-RCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDC 103
D C +C+C+ G G +C C G WG++ ++ C C G+ C
Sbjct: 543 DGCDPVHGRCQCQAGWMGARCHLSCPEGLWGVNCSNT----------CTCKNGGT----C 588
Query: 104 EQMTGRCVCKPGVKGSKCNECLDPN---KKLGPNGCMPGMEVKPCNGEPPVINLQTGVEL 160
G CVC PG +G C P K+ P C P NG + TG +
Sbjct: 589 LPENGNCVCAPGFRGPSCQRSCQPGRYGKRCVPCKCANHSFCHPSNGTCYCLAGWTGPDC 648
Query: 161 D--CGSGANREDCPSDAYCH 178
C G E+C CH
Sbjct: 649 SQPCPPGHWGENCAQTCQCH 668
Score = 117 (46.2 bits), Expect = 0.00023, P = 0.00023
Identities = 56/192 (29%), Positives = 68/192 (35%)
Query: 8 CLDSWYGCCPDNKTLAQ------GPDNAG-CP-STCG--CNKLGSTEDA--CIEDTEQCK 55
CL G C L Q GP A CP T G C+ S E+A C +C
Sbjct: 408 CLCLHGGVCQATSGLCQCAPGYTGPHCASLCPPDTYGVNCSARCSCENAIACSPIDGECV 467
Query: 56 CKQGVGGLKCD-RCEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKP 114
CK+G C C PG WG S +S C C+ C TG C C P
Sbjct: 468 CKEGWQRGNCSVPCPPGTWGFSCNAS----------CQCAH----EAVCSPQTGACTCTP 513
Query: 115 GVKGSKCN-ECLDPNKKLGPNGCMPGMEVKPCNGEPPV---INLQTG-----VELDCGSG 165
G G+ C C P + G GC + +G PV Q G L C G
Sbjct: 514 GWHGAHCQLPC--PKGQFG-EGCASRCDCDHSDGCDPVHGRCQCQAGWMGARCHLSCPEG 570
Query: 166 ANREDCPSDAYC 177
+C + C
Sbjct: 571 LWGVNCSNTCTC 582
>UNIPROTKB|F1MHH5 [details] [associations]
symbol:CELSR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007413 "axonal fasciculation" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008 Pfam:PF00028
Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008 SMART:SM00112
SMART:SM00181 SMART:SM00303 GO:GO:0016021 GO:GO:0005886
GO:GO:0001764 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007413 GO:GO:0007156 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 OMA:DGRRVDM
EMBL:DAAA02054431 IPI:IPI00728856 Ensembl:ENSBTAT00000029126
Uniprot:F1MHH5
Length = 3300
Score = 127 (49.8 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 22/57 (38%), Positives = 29/57 (50%)
Query: 81 YAP-DIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGC 136
Y P D CL C C GS C +G+C C+PG G +CN C P ++ +GC
Sbjct: 2048 YRPRGSDSCLPCDCYPVGSTSRSCAPHSGQCPCRPGALGRQCNSCDSPFAEVTASGC 2104
Score = 46 (21.3 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 50 DTEQCK----CKQGVGGLKCDRCEPGYWG 74
D+ CK C + GG CD C G+ G
Sbjct: 1709 DSGPCKNNGICSERWGGFSCD-CPVGFGG 1736
Score = 41 (19.5 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 14 GCCPDNKTLAQGPDNAGCPSTCGCNKLGSTE 44
G C + T A GPD C C G+ E
Sbjct: 1464 GVCRNGGTCANGPDGG---FRCQCPAGGAFE 1491
Score = 37 (18.1 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 6/12 (50%), Positives = 6/12 (50%)
Query: 54 CKCKQGVGGLKC 65
C C G GG C
Sbjct: 1728 CDCPVGFGGKDC 1739
>UNIPROTKB|F1M3T8 [details] [associations]
symbol:Atrnl1 "Protein Atrnl1" species:10116 "Rattus
norvegicus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR015915
Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041 SMART:SM00034
SMART:SM00181 RGD:1563485 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0007186 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431
SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR013111
InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
GeneTree:ENSGT00390000001118 IPI:IPI00358542
Ensembl:ENSRNOT00000023414 ArrayExpress:F1M3T8 Uniprot:F1M3T8
Length = 1199
Score = 131 (51.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 35/104 (33%), Positives = 47/104 (45%)
Query: 31 CPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDG-CL 89
CP+ C CN G + CI + +CK G +C C PGY+G P G C
Sbjct: 992 CPA-CQCN--GHS--TCINNNVCEQCKNLTTGRQCQDCMPGYYG-------DPTNGGQCT 1039
Query: 90 KCGCSQFGSVREDCEQMTGRCVCKP-GVKGSKCNECLDPNKKLG 132
C C +V C TG+C C G+KG +C C N+ +G
Sbjct: 1040 ACTCGGHANV---CHLHTGKCFCTTKGIKGDQCQLCDSENRYVG 1080
Score = 35 (17.4 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 1 SGIYLKSCLDSWYGCCPD 18
+G L C DSW G PD
Sbjct: 246 TGEKLCVCNDSWQG--PD 261
>UNIPROTKB|F1RKL7 [details] [associations]
symbol:MEGF10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055001 "muscle cell development" evidence=IEA]
[GO:0051147 "regulation of muscle cell differentiation"
evidence=IEA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=IEA] [GO:0043654 "recognition of apoptotic
cell" evidence=IEA] [GO:0034109 "homotypic cell-cell adhesion"
evidence=IEA] [GO:0014841 "satellite cell proliferation"
evidence=IEA] [GO:0014816 "satellite cell differentiation"
evidence=IEA] [GO:0014719 "satellite cell activation" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 Pfam:PF07546 PROSITE:PS50026 PROSITE:PS51041
SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891
GO:GO:0048641 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 Pfam:PF12661
GeneTree:ENSGT00690000101691 GO:GO:0043654 GO:GO:0051147
GO:GO:0014719 GO:GO:0014841 EMBL:AEMK01186990 EMBL:CU582932
EMBL:CU914445 Ensembl:ENSSSCT00000015571 OMA:EDCAKEC
ArrayExpress:F1RKL7 Uniprot:F1RKL7
Length = 305
Score = 125 (49.1 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 52/192 (27%), Positives = 68/192 (35%)
Query: 8 CLDSW-YGCC--PDNKTLAQGPDNAGCPSTCGCNKLG---------STEDACIEDTEQCK 55
C D +G C P+ G C S C + G C T C
Sbjct: 109 CADKCVHGRCIAPNTCQCEPGWGGTNCSSACDGDHWGPHCSSRCQCKNRALCNPITGACH 168
Query: 56 CKQGVGGLKCD-RCEPGYWGLSKISSYAPDIDGC-LKCGCSQFGSVREDCEQMTGRCVCK 113
C G G +C+ RCE G +G + C +C C Q G+ C+ +TG C C
Sbjct: 169 CAAGFRGWRCEERCEQGTYG-----------NDCHQRCQC-QNGAT---CDHVTGECRCP 213
Query: 114 PGVKGSKCNECLDPNKKLGPN-----GCMPGMEVKPCNGEPPVIN--LQTGVELDCGSGA 166
PG G+ C + P K GP C G GE P L T C G
Sbjct: 214 PGYTGAFCEDLCPPGKH-GPQCEQRCPCQNGGVCHHVTGECPCPPGWLGTVCGQPCPEGR 272
Query: 167 NREDCPSDAYCH 178
++C + CH
Sbjct: 273 FGKNCSQECQCH 284
>UNIPROTKB|G3V8P3 [details] [associations]
symbol:Celsr2 "Cadherin EGF LAG seven-pass G-type receptor
2" species:10116 "Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007156 "homophilic
cell adhesion" evidence=IEA] [GO:0007218 "neuropeptide signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0021591 "ventricular system development"
evidence=IEA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001368 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008 SMART:SM00112
SMART:SM00179 SMART:SM00181 SMART:SM00208 SMART:SM00303
InterPro:IPR000152 RGD:69237 GO:GO:0016021 GO:GO:0005886
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624
Pfam:PF12003 EMBL:CH473952 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 CTD:1952 KO:K04601
OMA:YILRAYA UniGene:Rn.222746 RefSeq:NP_001178039.1
Ensembl:ENSRNOT00000027263 GeneID:83465 KEGG:rno:83465
NextBio:615853 Uniprot:G3V8P3
Length = 2919
Score = 126 (49.4 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 22/54 (40%), Positives = 30/54 (55%)
Query: 83 PDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGC 136
P CL C C GS+ C+ G+C CKPGV G +C+ C +P ++ NGC
Sbjct: 1916 PSSPTCLLCDCYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPFAEVTTNGC 1969
Score = 52 (23.4 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 30 GCPS---TCGCNKLGSTEDACIE--DTEQCKCKQGVGGLKC 65
GCP+ C N + C+ D C+C G GG C
Sbjct: 1570 GCPTKKNVCDSNTCHNG-GTCVNQWDAFSCECPLGFGGKSC 1609
Score = 44 (20.5 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 12/57 (21%), Positives = 25/57 (43%)
Query: 16 CPDNKT-LAQGPDNAGCPSTCGCNKLGS--TEDACIEDTEQCKCKQGVGGLKCDRCE 69
CP++ + P + GCP +C +G + + ++ C + L+C C+
Sbjct: 94 CPESGAHIPLPPSSEGCPWSCRLLGIGGHLSPQGTLTLPQEHPCLKAPR-LRCQSCK 149
>UNIPROTKB|F1SRK3 [details] [associations]
symbol:F1SRK3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005540
"hyaluronic acid binding" evidence=IEA] InterPro:IPR000538
InterPro:IPR000742 Pfam:PF00193 PROSITE:PS01241 PROSITE:PS50026
PROSITE:PS50963 SMART:SM00181 SMART:SM00445 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR013111 Pfam:PF07974 GO:GO:0005540 InterPro:IPR024731
Pfam:PF12947 Gene3D:2.40.155.10 InterPro:IPR023413
GeneTree:ENSGT00690000101914 EMBL:FP340590
ProteinModelPortal:F1SRK3 Ensembl:ENSSSCT00000000929 OMA:ASGRILX
Uniprot:F1SRK3
Length = 449
Score = 127 (49.8 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 35/99 (35%), Positives = 42/99 (42%)
Query: 26 PDNAGCPS--TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAP 83
PD CP CN G D QCKC G G C+ C PG +G P
Sbjct: 138 PDCQACPGGPDTPCNNRGVCLDQ-YSPMGQCKCNAGFTGTACELCWPGRFG--------P 188
Query: 84 DIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN 122
D C CGCS G +D +G+CVC+ G G C+
Sbjct: 189 D---CQPCGCSDHGQC-DDGITGSGQCVCETGWIGRFCD 223
>UNIPROTKB|E2R4F0 [details] [associations]
symbol:CELSR2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0021591 "ventricular system development"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001368 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008 SMART:SM00112
SMART:SM00179 SMART:SM00181 SMART:SM00208 SMART:SM00303
InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886 GO:GO:0001764
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624
Pfam:PF12003 Gene3D:2.60.40.60 GeneTree:ENSGT00700000104170
Pfam:PF02210 CTD:1952 KO:K04601 OMA:YILRAYA EMBL:AAEX03004736
RefSeq:XP_537042.2 ProteinModelPortal:E2R4F0
Ensembl:ENSCAFT00000031564 GeneID:479916 KEGG:cfa:479916
NextBio:20855025 Uniprot:E2R4F0
Length = 2926
Score = 125 (49.1 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 22/54 (40%), Positives = 30/54 (55%)
Query: 83 PDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGC 136
P CL C C GS+ C+ G+C CKPGV G +C+ C +P ++ NGC
Sbjct: 1919 PGSPTCLLCDCYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPFAEVTTNGC 1972
Score = 53 (23.7 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 16/44 (36%), Positives = 19/44 (43%)
Query: 30 GCPS---TCG---CNKLGSTEDACIE--DTEQCKCKQGVGGLKC 65
GCP+ C CN G T C+ D C+C G GG C
Sbjct: 1573 GCPAKKNVCDSSTCNN-GGT---CVNQWDAFSCECPLGFGGKSC 1612
Score = 48 (22.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 15/49 (30%), Positives = 19/49 (38%)
Query: 35 CGCNKLGSTEDACIEDTEQC---------KCKQGVGGLKCDRCEPGYWG 74
C C G T D C + + C +C+ GG C C GY G
Sbjct: 1277 CRCPP-GFTGDYCETEVDLCYSRPCGPHGRCRSREGGYTC-LCRDGYTG 1323
>ZFIN|ZDB-GENE-050310-2 [details] [associations]
symbol:ntn2 "netrin 2" species:7955 "Danio rerio"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 ZFIN:ZDB-GENE-050310-2 GO:GO:0005576
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4VHK67 GeneTree:ENSGT00700000104042
OMA:RAHPASY EMBL:FP102170 EMBL:CU929347 EMBL:AY928518
IPI:IPI00628796 RefSeq:NP_001032492.1 UniGene:Dr.153063
Ensembl:ENSDART00000112318 GeneID:641469 KEGG:dre:641469 CTD:641469
NextBio:20901575 Uniprot:Q32SK9
Length = 600
Score = 128 (50.1 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 40/140 (28%), Positives = 59/140 (42%)
Query: 56 CKQGVGGLKCDRCEPGYW-GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKP 114
C+ G C C+ G++ + K ++ C C C G+ + C Q TG+C CK
Sbjct: 365 CRHNTAGRHCHYCKEGFYRDMGKAITHRR---ACKACDCHPVGAAGKTCNQTTGQCPCKD 421
Query: 115 GVKGSKCNECLDPNKKLGPNGCMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDCPSD 174
GV G CN C ++ P V PC + PVI T V + DC D
Sbjct: 422 GVTGITCNRCAKGYQQ----SRSP---VAPCI-KIPVIK-PTAV---ISTTEEPADC--D 467
Query: 175 AYC-----HITQNFARCCRK 189
+YC ++ N + C+K
Sbjct: 468 SYCKPLKGNLKINMKKYCKK 487
Score = 114 (45.2 bits), Expect = 0.00028, P = 0.00028
Identities = 33/91 (36%), Positives = 46/91 (50%)
Query: 35 CGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCS 94
C C+ +G+ C + T QC CK GV G+ C+RC GY S+ S AP C+K
Sbjct: 398 CDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQ-SR-SPVAP----CIKIPVI 451
Query: 95 QFGSVREDCEQMTGRC--VCKPGVKGS-KCN 122
+ +V E+ C CKP +KG+ K N
Sbjct: 452 KPTAVISTTEEPAD-CDSYCKP-LKGNLKIN 480
>UNIPROTKB|F1SB08 [details] [associations]
symbol:F1SB08 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050793 "regulation of developmental process"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00023 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645
Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004
SMART:SM00179 SMART:SM00181 SMART:SM00248 InterPro:IPR000152
GO:GO:0016021 GO:GO:0007275 GO:GO:0030154 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007219 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 PROSITE:PS00010 GO:GO:0050793
GeneTree:ENSGT00700000104305 SUPFAM:SSF90193 InterPro:IPR024600
Pfam:PF11936 InterPro:IPR022336 PRINTS:PR01985 OMA:VCMPGFT
EMBL:CU467688 Ensembl:ENSSSCT00000007349 Uniprot:F1SB08
Length = 2175
Score = 133 (51.9 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 38/121 (31%), Positives = 56/121 (46%)
Query: 28 NAGCPSTCGCNKLGSTEDACIEDTEQCK---CKQG------VGGLKCDRCEPGYWGLSKI 78
NAG C C LG T C E ++C C+ G +GG +C+ C PGY G++
Sbjct: 832 NAGNSHHCQC-PLGYTGSYCEEQLDECSSNPCQHGATCRDFIGGYRCE-CVPGYQGVN-- 887
Query: 79 SSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP 138
Y ++D C C G+ + +C C PG +G C E +D + GP+ C+
Sbjct: 888 CEY--EVDECQNQPCQNGGTCIDLVNHF--KCSCPPGTRGLLCEENIDDCAR-GPH-CLN 941
Query: 139 G 139
G
Sbjct: 942 G 942
Score = 35 (17.4 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 160 LDCGSGANRED----CPSDA 175
LD G+ AN +D CP A
Sbjct: 1601 LDAGADANAQDNMGRCPLHA 1620
>UNIPROTKB|Q9HCU4 [details] [associations]
symbol:CELSR2 "Cadherin EGF LAG seven-pass G-type receptor
2" species:9606 "Homo sapiens" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0021591 "ventricular system development" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=NAS]
[GO:0021999 "neural plate anterior/posterior regionalization"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0022407 "regulation of cell-cell
adhesion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0007156 "homophilic
cell adhesion" evidence=ISS] [GO:0016055 "Wnt receptor signaling
pathway" evidence=ISS] [GO:0048813 "dendrite morphogenesis"
evidence=ISS] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001368 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS00649 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00008 SMART:SM00112 SMART:SM00179 SMART:SM00181
SMART:SM00208 SMART:SM00303 InterPro:IPR000152 GO:GO:0016021
GO:GO:0005886 GO:GO:0005737 GO:GO:0001764 GO:GO:0006355
GO:GO:0016055 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
GO:GO:0007283 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0048813 PROSITE:PS01186 GO:GO:0022407
eggNOG:NOG12793 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60 Pfam:PF02210
HOGENOM:HOG000231346 HOVERGEN:HBG050887 OrthoDB:EOG4KKZ23
EMBL:AF234887 EMBL:AB065955 EMBL:AL390252 EMBL:D87469
IPI:IPI00015346 RefSeq:NP_001399.1 UniGene:Hs.57652
ProteinModelPortal:Q9HCU4 SMR:Q9HCU4 IntAct:Q9HCU4
MINT:MINT-1395407 STRING:Q9HCU4 MEROPS:I63.002 PhosphoSite:Q9HCU4
DMDM:22095550 PaxDb:Q9HCU4 PRIDE:Q9HCU4 Ensembl:ENST00000271332
GeneID:1952 KEGG:hsa:1952 UCSC:uc001dxa.4 CTD:1952
GeneCards:GC01P109792 HGNC:HGNC:3231 HPA:HPA013952 MIM:604265
neXtProt:NX_Q9HCU4 PharmGKB:PA26394 InParanoid:Q9HCU4 KO:K04601
OMA:YILRAYA ChiTaRS:CELSR2 GenomeRNAi:1952 NextBio:7911 Bgee:Q9HCU4
CleanEx:HS_CELSR2 Genevestigator:Q9HCU4 GermOnline:ENSG00000143126
GO:GO:0021999 Uniprot:Q9HCU4
Length = 2923
Score = 125 (49.1 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 22/54 (40%), Positives = 30/54 (55%)
Query: 83 PDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGC 136
P CL C C GS+ C+ G+C CKPGV G +C+ C +P ++ NGC
Sbjct: 1916 PGSPTCLLCDCYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPFAEVTTNGC 1969
Score = 52 (23.4 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 30 GCPS---TCGCNKLGSTEDACIE--DTEQCKCKQGVGGLKC 65
GCP+ C N + C+ D C+C G GG C
Sbjct: 1570 GCPAKKNVCDSNTCHNG-GTCVNQWDAFSCECPLGFGGKSC 1609
Score = 48 (22.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 15/49 (30%), Positives = 19/49 (38%)
Query: 35 CGCNKLGSTEDACIEDTEQC---------KCKQGVGGLKCDRCEPGYWG 74
C C G T D C + + C +C+ GG C C GY G
Sbjct: 1274 CRCPP-GFTGDYCETEVDLCYSRPCGPHGRCRSREGGYTC-LCRDGYTG 1320
>UNIPROTKB|G3V6X3 [details] [associations]
symbol:Ntn3 "Netrin 2-like (Chicken)" species:10116 "Rattus
norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] InterPro:IPR001134 PROSITE:PS50189
RGD:619811 GO:GO:0005576 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 EMBL:CH473948
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 CTD:4917 KO:K06844
OMA:TASPLCW GeneTree:ENSGT00700000104042 RefSeq:NP_446184.1
UniGene:Rn.95949 Ensembl:ENSRNOT00000009735 GeneID:114524
KEGG:rno:114524 NextBio:618679 Uniprot:G3V6X3
Length = 580
Score = 127 (49.8 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 24/70 (34%), Positives = 32/70 (45%)
Query: 56 CKQGVGGLKCDRCEPGYW-GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKP 114
C+ G C C G++ ++ S D C C C G+ + C Q TG+C CK
Sbjct: 341 CRHNTAGRHCHYCREGFYRDPGRVLS---DRRACRACDCHPVGAAGKTCNQTTGQCPCKD 397
Query: 115 GVKGSKCNEC 124
GV G CN C
Sbjct: 398 GVTGLTCNRC 407
Score = 122 (48.0 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 32/94 (34%), Positives = 46/94 (48%)
Query: 27 DNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
D C + C C+ +G+ C + T QC CK GV GL C+RC PG+ S+ S AP +
Sbjct: 367 DRRACRA-CDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAPGFQQ-SR-SPVAPCVK 423
Query: 87 GCLKCGCSQFGSVR-EDCEQMTGRCVCKPGVKGS 119
+ + V +DCE C+P +GS
Sbjct: 424 TPVPGPTEESSPVEPQDCESH-----CRPA-RGS 451
Score = 110 (43.8 bits), Expect = 0.00082, P = 0.00082
Identities = 39/154 (25%), Positives = 55/154 (35%)
Query: 35 CGCNKLGSTEDACIEDTEQ---CKCKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKC 91
C CN S C+ DT C C+ G G C RC+P Y + + CL C
Sbjct: 255 CKCNGHSSR---CLMDTHGHLVCDCQHGTEGPDCSRCKPFYCDRPWQRATGQEAHACLAC 311
Query: 92 GCSQFGS-VREDCE--QMTGR-----CV-CKPGVKGSKCNECL-----DPNKKLGPNGCM 137
C+ R + E +++GR C+ C+ G C+ C DP + L
Sbjct: 312 SCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSDRRAC 371
Query: 138 PGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
+ P N TG + C G C
Sbjct: 372 RACDCHPVGAAGKTCNQTTG-QCPCKDGVTGLTC 404
>MGI|MGI:1341188 [details] [associations]
symbol:Ntn3 "netrin 3" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IDA;IPI] [GO:0005576
"extracellular region" evidence=IDA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISA] [GO:0007409 "axonogenesis"
evidence=TAS] [GO:0007520 "myoblast fusion" evidence=ISA]
InterPro:IPR001134 PROSITE:PS50189 MGI:MGI:1341188 GO:GO:0005794
GO:GO:0005576 GO:GO:0006355 GO:GO:0005578 GO:GO:0005102
InterPro:IPR013032 PROSITE:PS00022 Reactome:REACT_127416
GO:GO:0007409 PROSITE:PS01186 GO:GO:0007520 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4VHK67 CTD:4917 KO:K06844
OMA:TASPLCW EMBL:AF152418 EMBL:AK031199 EMBL:AF149094 EMBL:AF128866
IPI:IPI00471207 RefSeq:NP_035077.1 UniGene:Mm.259542
ProteinModelPortal:Q9R1A3 SMR:Q9R1A3 STRING:Q9R1A3
PhosphoSite:Q9R1A3 PRIDE:Q9R1A3 Ensembl:ENSMUST00000024931
GeneID:18209 KEGG:mmu:18209 GeneTree:ENSGT00700000104042
InParanoid:Q9R1A3 NextBio:293594 Bgee:Q9R1A3 Genevestigator:Q9R1A3
GermOnline:ENSMUSG00000036473 Uniprot:Q9R1A3
Length = 580
Score = 127 (49.8 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 24/70 (34%), Positives = 32/70 (45%)
Query: 56 CKQGVGGLKCDRCEPGYW-GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKP 114
C+ G C C G++ ++ S D C C C G+ + C Q TG+C CK
Sbjct: 341 CRHNTAGRHCHYCREGFYRDPGRVLS---DRRACRACDCHPVGAAGKTCNQTTGQCPCKD 397
Query: 115 GVKGSKCNEC 124
GV G CN C
Sbjct: 398 GVTGLTCNRC 407
Score = 122 (48.0 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 32/94 (34%), Positives = 46/94 (48%)
Query: 27 DNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYAPDID 86
D C + C C+ +G+ C + T QC CK GV GL C+RC PG+ S+ S AP +
Sbjct: 367 DRRACRA-CDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAPGFQQ-SR-SPVAPCVK 423
Query: 87 GCLKCGCSQFGSVR-EDCEQMTGRCVCKPGVKGS 119
+ + V +DCE C+P +GS
Sbjct: 424 TPVPGPTEESSPVEPQDCESH-----CRPA-RGS 451
>UNIPROTKB|F1NW88 [details] [associations]
symbol:F1NW88 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005540 "hyaluronic acid binding" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005041 "low-density
lipoprotein receptor activity" evidence=IEA] [GO:0005044 "scavenger
receptor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0030169 "low-density lipoprotein particle
binding" evidence=IEA] [GO:0042742 "defense response to bacterium"
evidence=IEA] [GO:0051636 "Gram-negative bacterial cell surface
binding" evidence=IEA] InterPro:IPR000538 InterPro:IPR000742
Pfam:PF00193 PROSITE:PS50026 PROSITE:PS50963 SMART:SM00181
SMART:SM00445 Pfam:PF02469 InterPro:IPR000782 GO:GO:0005737
GO:GO:0005887 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 PROSITE:PS01248
GO:GO:0030169 Gene3D:2.30.180.10 SMART:SM00554 SUPFAM:SSF82153
PROSITE:PS50213 InterPro:IPR009030 SUPFAM:SSF57184 GO:GO:0051636
GO:GO:0005044 GO:GO:0005540 GO:GO:0005041 InterPro:IPR024731
Pfam:PF12947 Gene3D:2.40.155.10 InterPro:IPR023413
GeneTree:ENSGT00690000101914 OMA:IPKCCKG EMBL:AADN02006314
EMBL:AADN02006315 EMBL:AADN02006316 IPI:IPI00592078
Ensembl:ENSGALT00000020806 Uniprot:F1NW88
Length = 2517
Score = 132 (51.5 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 47/162 (29%), Positives = 56/162 (34%)
Query: 25 GPDNAGCPS--TCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISSYA 82
GPD CP CN G +D T +C C G G C+ C PG +G S
Sbjct: 1926 GPDCQACPGGPETPCNSHGYCDDG-YTGTGECHCYSGFNGTSCELCLPGRYGSS------ 1978
Query: 83 PDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMPG--- 139
C C C G E TGRC C+ G G C L P+ C
Sbjct: 1979 -----CKPCECKNNGQCEEGYSG-TGRCFCETGWTGRLCENKLALTPVCSPS-CSANAVC 2031
Query: 140 MEVKPCNGEPPVINLQTGVELDCGSG----ANREDCPSDAYC 177
ME C +P L G + C + N C A C
Sbjct: 2032 MENNTCQCKP----LYNGDGITCTAADLCKQNNGGCHKAANC 2069
>MGI|MGI:1858430 [details] [associations]
symbol:Scarf2 "scavenger receptor class F, member 2"
species:10090 "Mus musculus" [GO:0005044 "scavenger receptor
activity" evidence=IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007157
"heterophilic cell-cell adhesion" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181
MGI:MGI:1858430 GO:GO:0016021 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0007157 InterPro:IPR009030 SUPFAM:SSF57184
GO:GO:0005044 CTD:91179 eggNOG:NOG284054 HOGENOM:HOG000015093
HOVERGEN:HBG023166 OMA:NVCRAPG EMBL:AF522197 IPI:IPI00177200
RefSeq:NP_722485.1 UniGene:Mm.194950 ProteinModelPortal:P59222
SMR:P59222 STRING:P59222 PhosphoSite:P59222 PaxDb:P59222
PRIDE:P59222 Ensembl:ENSMUST00000012161 GeneID:224024
KEGG:mmu:224024 InParanoid:P59222 OrthoDB:EOG4QJRMT ChiTaRS:SCARF2
NextBio:377021 Bgee:P59222 CleanEx:MM_SCARF2 Genevestigator:P59222
GermOnline:ENSMUSG00000012017 Uniprot:P59222
Length = 833
Score = 128 (50.1 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 51/190 (26%), Positives = 72/190 (37%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCD-RCEPGYW 73
CC + L D G + C N S + C+ E C+C+ G G CD +C +W
Sbjct: 56 CCAGWRQLG---DECGI-AVCEGNSTCSENEVCVRPGE-CRCRHGYFGANCDTKCPRQFW 110
Query: 74 GLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN---ECLDP--N 128
G PD +C C G CE +TG+C C G++C +C +
Sbjct: 111 G--------PDCKE--RCSCHPHGQ----CEDVTGQCTCHARRWGARCEHACQCQHGTCH 156
Query: 129 KKLGPNGCMPGMEVKPCNGE-----PPVINLQTGVELDCGSGANREDCPSDAYCHIT--- 180
+ G C PG C + QTG L C G C + C+ +
Sbjct: 157 PRSGACRCEPGWWGAQCASACYCSATSRCDPQTGACL-CHVGWWGRSCNNQCACNSSPCE 215
Query: 181 QNFARC-CRK 189
Q RC CR+
Sbjct: 216 QQSGRCQCRE 225
Score = 121 (47.7 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 46/160 (28%), Positives = 63/160 (39%)
Query: 34 TCGCNKLGST-EDACIEDTEQCKCKQGVGGLKCDRCEPGYWGLSKISS-YA-------PD 84
TC + G+ E AC C + G C RCEPG+WG S+ Y P
Sbjct: 134 TCHARRWGARCEHACQCQHGTCHPRSGA----C-RCEPGWWGAQCASACYCSATSRCDPQ 188
Query: 85 IDGCLKC-------GCS-QFGSVREDCEQMTGRCVCKPGVKGSKCNE-CLDPNKKLGP-N 134
CL C C+ Q CEQ +GRC C+ + G++C+ C + + P +
Sbjct: 189 TGACL-CHVGWWGRSCNNQCACNSSPCEQQSGRCQCRERMFGARCDRYCQCSHGRCHPVD 247
Query: 135 G---CMPGMEVKPCNGEPPVINLQTGVELDCGSGANREDC 171
G C PG K C P G CG ++ C
Sbjct: 248 GTCACDPGYRGKYCREPCPAGFYGPGCRRRCGQCKGQQPC 287
Score = 118 (46.6 bits), Expect = 0.00014, P = 0.00014
Identities = 37/124 (29%), Positives = 50/124 (40%)
Query: 8 CLDSWYGCCPDNKTLAQ--GPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKC 65
C ++G D K Q GPD C C C+ G ED T QC C G +C
Sbjct: 92 CRHGYFGANCDTKCPRQFWGPD---CKERCSCHPHGQCEDV----TGQCTCHARRWGARC 144
Query: 66 D---RCEPGYWG-LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
+ +C+ G S P G +C + + S C+ TG C+C G G C
Sbjct: 145 EHACQCQHGTCHPRSGACRCEPGWWGA-QCASACYCSATSRCDPQTGACLCHVGWWGRSC 203
Query: 122 N-EC 124
N +C
Sbjct: 204 NNQC 207
>UNIPROTKB|F1ML32 [details] [associations]
symbol:SCARF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048680 "positive regulation of axon regeneration"
evidence=IEA] [GO:0030169 "low-density lipoprotein particle
binding" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0016322 "neuron remodeling" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005044
"scavenger receptor activity" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 GO:GO:0016021 GO:GO:0016358
GO:GO:0016322 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 GO:GO:0048680 GO:GO:0030169 InterPro:IPR009030
SUPFAM:SSF57184 GO:GO:0005044 GeneTree:ENSGT00690000101691
OMA:GWWGPEC EMBL:DAAA02048662 IPI:IPI00711101
Ensembl:ENSBTAT00000015261 Uniprot:F1ML32
Length = 841
Score = 128 (50.1 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 55/192 (28%), Positives = 71/192 (36%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCD-RCEPGYW 73
CCP + + C C + ++ C++ C+CK G G +C+ RC YW
Sbjct: 52 CCPGWRRKDRECTIPICEGLDACRE----DEVCVKPG-LCRCKPGFFGAQCNSRCPGQYW 106
Query: 74 GLSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN-ECL-DPNKK 130
G PD C + C C G CE TG C C+P G +C C P+ +
Sbjct: 107 G--------PD---CREVCACHPHGQ----CEPATGVCHCQPDRWGDRCEFPCACGPHGR 151
Query: 131 LGPN-G---CMPGMEV----KPCNGEPPVINLQ--TGVELDCGSGANREDCPSDAYCH-- 178
P G C PG +PC P TG L C G C CH
Sbjct: 152 CNPETGACRCEPGWWSPTCRRPCQCNPAAARCDQATGSCL-CEPGWWGRRCSFRCACHGS 210
Query: 179 -ITQNFARC-CR 188
Q RC CR
Sbjct: 211 PCAQESGRCACR 222
Score = 121 (47.7 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 51/179 (28%), Positives = 67/179 (37%)
Query: 10 DSWYGCCPDNKTLAQGPDNAGCPSTCGCN-KLGSTEDACIEDTEQCKCKQGVGGLKCDR- 67
D W C A GP P T C + G C C+C +CD+
Sbjct: 134 DRWGDRC--EFPCACGPHGRCNPETGACRCEPGWWSPTC---RRPCQCNPAAA--RCDQA 186
Query: 68 -----CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN 122
CEPG+WG + S+ +C C GS C Q +GRC C+PG G +C
Sbjct: 187 TGSCLCEPGWWG--RRCSF--------RCACH--GS---PCAQESGRCACRPGWWGPECR 231
Query: 123 ---ECLDPNKKL--GPNGCMPGMEVKPCNGEPPVINLQTGVEL--DCGSGANREDCPSD 174
EC+ G C PG + C E P Q G+ CG + C +D
Sbjct: 232 QPCECVRGRCSAVSGQCSCPPGFQGVRC--ELPCPAGQYGLRCRDSCGHCKQNKPCSAD 288
Score = 118 (46.6 bits), Expect = 0.00014, P = 0.00014
Identities = 48/163 (29%), Positives = 66/163 (40%)
Query: 1 SGIYLKSCLDSWYGCCPDNKTLAQGPDNA-GC-PSTCG--CNKL---GSTEDACIEDTEQ 53
+G Y C DS G C NK + + C P G C++ G+ + C +
Sbjct: 265 AGQYGLRCRDSC-GHCKQNKPCSADTGSCEACKPGWNGTQCHQPCPPGTFGENCSQQCPH 323
Query: 54 CK----CKQGVGGLKCDRCEPGYWGLSKISSYAPDIDGCLKCGCSQF--GSVREDCEQMT 107
C+ C+ G C RCEPG+ G + P + G GC V+ C+ +T
Sbjct: 324 CRLGEACQPDTG--HCQRCEPGWRG-PRCED--PCLIGTFGEGCGSTCPTCVQGACDAVT 378
Query: 108 GRCVCKPGVKGSKCN-ECLDPNKKLGPNGCMPGMEVKPCNGEP 149
G CVC G G CN C P+ G N C E N +P
Sbjct: 379 GECVCNAGYWGPSCNTSC--PSGFHG-NNCSVPCECPEGNCDP 418
Score = 117 (46.2 bits), Expect = 0.00018, P = 0.00018
Identities = 46/155 (29%), Positives = 69/155 (44%)
Query: 8 CLDSWYGCCPDNKTLAQ--GPDNAGCPSTCGCNKLGSTEDA-----CIEDT--EQCK--C 56
C ++G +++ Q GPD C C C+ G E A C D ++C+ C
Sbjct: 88 CKPGFFGAQCNSRCPGQYWGPD---CREVCACHPHGQCEPATGVCHCQPDRWGDRCEFPC 144
Query: 57 KQGVGGLKCD------RCEPGYWGLSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGR 109
G G +C+ RCEPG+W +P C + C C+ + R C+Q TG
Sbjct: 145 ACGPHG-RCNPETGACRCEPGWW--------SPT---CRRPCQCNP-AAAR--CDQATGS 189
Query: 110 CVCKPGVKGSKCN-ECL---DP-NKKLGPNGCMPG 139
C+C+PG G +C+ C P ++ G C PG
Sbjct: 190 CLCEPGWWGRRCSFRCACHGSPCAQESGRCACRPG 224
>UNIPROTKB|E1B9M8 [details] [associations]
symbol:SCARF2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007157 "heterophilic cell-cell adhesion" evidence=IEA]
[GO:0005044 "scavenger receptor activity" evidence=IEA]
InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0007157 InterPro:IPR002049 Pfam:PF00053
InterPro:IPR009030 SUPFAM:SSF57184 GO:GO:0005044
GeneTree:ENSGT00690000101691 OMA:NVCRAPG EMBL:DAAA02045750
EMBL:DAAA02045751 EMBL:DAAA02045752 IPI:IPI00690576
Ensembl:ENSBTAT00000025815 Uniprot:E1B9M8
Length = 843
Score = 128 (50.1 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 53/191 (27%), Positives = 75/191 (39%)
Query: 15 CCPDNKTLAQGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCD-RCEPGYW 73
CC + QG D G + C N S + C+ E C+C+ G G CD +C +W
Sbjct: 57 CCAGWRQ--QG-DECGI-AVCEGNSTCSENEVCVRPGE-CRCRHGYFGANCDTKCPRQFW 111
Query: 74 GLSKISSYAPDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN---ECLDP-- 127
G PD C + C C G CE +TG+C C G++C +C
Sbjct: 112 G--------PD---CKELCVCHPHGQ----CEDVTGQCTCHARRWGARCEHACQCQHGAC 156
Query: 128 NKKLGPNGCMPGMEVKPCNGE-----PPVINLQTGVELDCGSGANREDCPSDAYCHIT-- 180
+ + G C PG C + QTG L C +G C + C+ +
Sbjct: 157 HPRSGACRCEPGWWGPQCASACYCSATSRCDPQTGACL-CHAGWWGRSCNNQCACNTSPC 215
Query: 181 -QNFARC-CRK 189
Q RC CR+
Sbjct: 216 EQQSGRCQCRE 226
Score = 113 (44.8 bits), Expect = 0.00057, P = 0.00057
Identities = 35/123 (28%), Positives = 48/123 (39%)
Query: 8 CLDSWYGCCPDNKTLAQ--GPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKC 65
C ++G D K Q GPD C C C+ G ED T QC C G +C
Sbjct: 93 CRHGYFGANCDTKCPRQFWGPD---CKELCVCHPHGQCEDV----TGQCTCHARRWGARC 145
Query: 66 DR-CEPGYWGLSKISSYAPDIDGCL--KCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN 122
+ C+ + S G +C + + S C+ TG C+C G G CN
Sbjct: 146 EHACQCQHGACHPRSGACRCEPGWWGPQCASACYCSATSRCDPQTGACLCHAGWWGRSCN 205
Query: 123 -EC 124
+C
Sbjct: 206 NQC 208
>UNIPROTKB|F1RK83 [details] [associations]
symbol:SCARF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007157 "heterophilic cell-cell adhesion" evidence=IEA]
[GO:0005044 "scavenger receptor activity" evidence=IEA]
InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0007157 InterPro:IPR009030 SUPFAM:SSF57184
GO:GO:0005044 GeneTree:ENSGT00690000101691 OMA:NVCRAPG
EMBL:CU468322 Ensembl:ENSSSCT00000011070 Uniprot:F1RK83
Length = 870
Score = 128 (50.1 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 52/182 (28%), Positives = 72/182 (39%)
Query: 24 QGPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCD-RCEPGYWGLSKISSYA 82
QG D G + C N S + C+ E C+C+ G G CD +C +WG
Sbjct: 71 QG-DECGI-AVCEGNSTCSENEVCVRPGE-CRCRHGYFGANCDTKCPRQFWG-------- 119
Query: 83 PDIDGCLK-CGCSQFGSVREDCEQMTGRCVCKPGVKGSKCN---ECLDP--NKKLGPNGC 136
PD C + C C G CE +TG+C C G++C +C + + G C
Sbjct: 120 PD---CKELCVCHPHGQ----CEDVTGQCTCHARRWGARCEHACQCQHGACHPRSGACRC 172
Query: 137 MPGMEVKPCNGE-----PPVINLQTGVELDCGSGANREDCPSDAYCHIT---QNFARC-C 187
PG C + QTG L C SG C + C+ + Q RC C
Sbjct: 173 EPGWWGAQCASACYCSATSRCDPQTGACL-CHSGWWGRSCNNQCACNSSPCEQQSGRCQC 231
Query: 188 RK 189
R+
Sbjct: 232 RE 233
Score = 116 (45.9 bits), Expect = 0.00025, P = 0.00025
Identities = 37/124 (29%), Positives = 50/124 (40%)
Query: 8 CLDSWYGCCPDNKTLAQ--GPDNAGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKC 65
C ++G D K Q GPD C C C+ G ED T QC C G +C
Sbjct: 100 CRHGYFGANCDTKCPRQFWGPD---CKELCVCHPHGQCEDV----TGQCTCHARRWGARC 152
Query: 66 D---RCEPGYWG-LSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKC 121
+ +C+ G S P G +C + + S C+ TG C+C G G C
Sbjct: 153 EHACQCQHGACHPRSGACRCEPGWWGA-QCASACYCSATSRCDPQTGACLCHSGWWGRSC 211
Query: 122 N-EC 124
N +C
Sbjct: 212 NNQC 215
Score = 113 (44.8 bits), Expect = 0.00059, P = 0.00059
Identities = 41/146 (28%), Positives = 52/146 (35%)
Query: 29 AGCPSTCGCNKLGSTEDACIEDTEQCKCKQGVGGLKCD-RCEPGYWGLSKISSYAPDIDG 87
A C S C C S C T C C G G C+ +C + S +
Sbjct: 179 AQCASACYC----SATSRCDPQTGACLCHSGWWGRSCNNQCACNSSPCEQQSGRCQCRER 234
Query: 88 CLKCGCSQFGSV-REDCEQMTGRCVCKPGVKGSKCNE-CLDPNKKLGPNGCMPGMEVKPC 145
C ++ R C + G C C+PG +G C E C P GP G P C
Sbjct: 235 TFGARCERYCQCFRGRCHPVDGTCSCEPGYRGKYCREPC--PAGFYGP-GLPP--PCGQC 289
Query: 146 NGEPPVINLQTGVELDCGSGANREDC 171
G+ P + G L C G N C
Sbjct: 290 KGQQPC-TVAEGRCLTCEPGWNGTKC 314
>UNIPROTKB|F1NFQ9 [details] [associations]
symbol:TEK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004714 "transmembrane receptor protein tyrosine kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001725 "stress fiber" evidence=IEA] [GO:0002040 "sprouting
angiogenesis" evidence=IEA] [GO:0005884 "actin filament"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0005902 "microvillus" evidence=IEA] [GO:0005911
"cell-cell junction" evidence=IEA] [GO:0007160 "cell-matrix
adhesion" evidence=IEA] [GO:0009925 "basal plasma membrane"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010595
"positive regulation of endothelial cell migration" evidence=IEA]
[GO:0014068 "positive regulation of phosphatidylinositol 3-kinase
cascade" evidence=IEA] [GO:0016324 "apical plasma membrane"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0016525 "negative regulation of angiogenesis" evidence=IEA]
[GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA]
[GO:0030097 "hemopoiesis" evidence=IEA] [GO:0032878 "regulation of
establishment or maintenance of cell polarity" evidence=IEA]
[GO:0033138 "positive regulation of peptidyl-serine
phosphorylation" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0043552 "positive regulation of phosphatidylinositol 3-kinase
activity" evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA]
[GO:0045766 "positive regulation of angiogenesis" evidence=IEA]
[GO:0046777 "protein autophosphorylation" evidence=IEA] [GO:0048014
"Tie receptor signaling pathway" evidence=IEA] [GO:0051259 "protein
oligomerization" evidence=IEA] [GO:0051894 "positive regulation of
focal adhesion assembly" evidence=IEA] [GO:0051897 "positive
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=IEA] [GO:2000251 "positive regulation of actin
cytoskeleton reorganization" evidence=IEA] InterPro:IPR000719
InterPro:IPR000742 InterPro:IPR001245 InterPro:IPR003961
InterPro:IPR007110 InterPro:IPR008266 InterPro:IPR011009
InterPro:IPR017441 InterPro:IPR018941 InterPro:IPR020635
Pfam:PF00041 Pfam:PF07714 Pfam:PF10430 PRINTS:PR00109
PROSITE:PS00107 PROSITE:PS00109 PROSITE:PS50011 PROSITE:PS50026
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 SMART:SM00181
SMART:SM00219 GO:GO:0051259 GO:GO:0005524 GO:GO:0009986
GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016324
GO:GO:0004714 GO:GO:0018108 SUPFAM:SSF49265 SUPFAM:SSF56112
InterPro:IPR003599 SMART:SM00409 GO:GO:0070374 GO:GO:0014068
GO:GO:0046777 GO:GO:0045766 GO:GO:0010595 GO:GO:0005911
GO:GO:0005884 GO:GO:0045121 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0001725 GO:GO:0016337 PROSITE:PS01186 GO:GO:0007160
GO:GO:0051897 GO:GO:0016525 GO:GO:0033138 GO:GO:0005902
GO:GO:0048014 GO:GO:0009925 GO:GO:2000251
GeneTree:ENSGT00670000097694 GO:GO:0043552 GO:GO:0051894
GO:GO:0032878 OMA:VDIFAEN EMBL:AADN02062581 EMBL:AADN02062582
EMBL:AADN02062583 EMBL:AADN02062584 IPI:IPI00596807
Ensembl:ENSGALT00000002845 Uniprot:F1NFQ9
Length = 1128
Score = 129 (50.5 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 53/168 (31%), Positives = 70/168 (41%)
Query: 7 SCLDSWYGCCPDNKTLAQGPDNAG--CPSTCGCNKLGST-EDACIE------------DT 51
SC+++ C D P G C CG N G T E++C E D
Sbjct: 227 SCMNNGI-CHEDTGECICPPGFMGKTCEKACGANTFGKTCEESCKENYGCKNYMFCLPDP 285
Query: 52 EQCKCKQGVGGLKCDR-CEPGYWGLSKISSYAPDIDGCLKCGCSQFGSVREDCEQMTGRC 110
C C G GL+CD+ C+PGY+G D LKC C G+ C++ G C
Sbjct: 286 YGCSCATGWMGLECDKECKPGYYGS----------DCKLKCNCHNRGT----CDRYKG-C 330
Query: 111 VCKPGVKGSKCNE----CLDPNKK--LGPNGCMPGMEVKP-C--NGEP 149
VC G G +C + L P + L P G+E KP C +G P
Sbjct: 331 VCSYGWHGLQCEKEGKPDLSPQIENLLDPVELNSGVEFKPYCIASGMP 378
>UNIPROTKB|Q04721 [details] [associations]
symbol:NOTCH2 "Neurogenic locus notch homolog protein 2"
species:9606 "Homo sapiens" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0002437 "inflammatory response to antigenic
stimulus" evidence=IEA] [GO:0006959 "humoral immune response"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA] [GO:0060674 "placenta blood vessel development"
evidence=IEA] [GO:0072602 "interleukin-4 secretion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0030097 "hemopoiesis"
evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=NAS] [GO:0001709 "cell fate determination" evidence=TAS]
[GO:0009986 "cell surface" evidence=IDA] [GO:0004872 "receptor
activity" evidence=NAS] [GO:0009887 "organ morphogenesis"
evidence=IEP] [GO:0043066 "negative regulation of apoptotic
process" evidence=TAS] [GO:0006917 "induction of apoptosis"
evidence=TAS] [GO:0019827 "stem cell maintenance" evidence=TAS]
[GO:0007050 "cell cycle arrest" evidence=IDA] [GO:0016049 "cell
growth" evidence=IDA] [GO:0046579 "positive regulation of Ras
protein signal transduction" evidence=IDA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IDA] [GO:0007399
"nervous system development" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0046849 "bone remodeling"
evidence=IMP] [GO:0000139 "Golgi membrane" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0007220 "Notch receptor processing" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0003184 "pulmonary
valve morphogenesis" evidence=IMP] [GO:0060413 "atrial septum
morphogenesis" evidence=IMP] [GO:0061314 "Notch signaling involved
in heart development" evidence=IC] Reactome:REACT_2001
Reactome:REACT_691 Reactome:REACT_71 InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR010660 InterPro:IPR011656
InterPro:IPR018097 Pfam:PF00008 Pfam:PF00023 Pfam:PF00066
Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279
PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
SMART:SM00248 InterPro:IPR000152 Reactome:REACT_111102
GO:GO:0043066 GO:GO:0005576 GO:GO:0008285 GO:GO:0007399
GO:GO:0005654 GO:GO:0009986 GO:GO:0000139 GO:GO:0005887
GO:GO:0006917 GO:GO:0006355 GO:GO:0002437 GO:GO:0005789
eggNOG:COG0666 GO:GO:0016049 GO:GO:0046849 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0005509 GO:GO:0004872 GO:GO:0007050 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0030326 GO:GO:0007368 PROSITE:PS01186
GO:GO:0007220 GO:GO:0042246 EMBL:AL359752 GO:GO:0030097
PROSITE:PS00010 GO:GO:0006959 GO:GO:0006367 GO:GO:0001709
GO:GO:0046579 GO:GO:0019827 Reactome:REACT_2155 GO:GO:0060413
GO:GO:0002011 GO:GO:0061314 GO:GO:0072602 SUPFAM:SSF90193
GO:GO:0003184 HOGENOM:HOG000234369 HOVERGEN:HBG052650 KO:K02599
InterPro:IPR024600 Pfam:PF11936 EMBL:AF308601 EMBL:AF315356
EMBL:AL512503 EMBL:AL596222 EMBL:U77493 IPI:IPI00297655
RefSeq:NP_001186930.1 RefSeq:NP_077719.2 UniGene:Hs.487360 PDB:2OO4
PDBsum:2OO4 ProteinModelPortal:Q04721 SMR:Q04721 IntAct:Q04721
MINT:MINT-1187009 STRING:Q04721 PhosphoSite:Q04721 DMDM:143811429
PaxDb:Q04721 PRIDE:Q04721 Ensembl:ENST00000256646
Ensembl:ENST00000581899 GeneID:4853 KEGG:hsa:4853 UCSC:uc001eik.3
CTD:4853 GeneCards:GC01M120454 HGNC:HGNC:7882 MIM:102500 MIM:600275
MIM:610205 neXtProt:NX_Q04721 Orphanet:955 Orphanet:261629
PharmGKB:PA31684 InParanoid:Q04721 OrthoDB:EOG4Q58NH
PhylomeDB:Q04721 ChiTaRS:NOTCH2 EvolutionaryTrace:Q04721
GenomeRNAi:4853 NextBio:18692 ArrayExpress:Q04721 Bgee:Q04721
CleanEx:HS_NOTCH2 Genevestigator:Q04721 GermOnline:ENSG00000134250
InterPro:IPR022336 PRINTS:PR01985 Uniprot:Q04721
Length = 2471
Score = 132 (51.5 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 38/121 (31%), Positives = 56/121 (46%)
Query: 28 NAGCPSTCGCNKLGSTEDACIEDTEQCK---CKQG------VGGLKCDRCEPGYWGLSKI 78
NAG C C LG T C E ++C C+ G +GG +C+ C PGY G++
Sbjct: 1128 NAGNTHYCQC-PLGYTGSYCEEQLDECASNPCQHGATCSDFIGGYRCE-CVPGYQGVN-- 1183
Query: 79 SSYAPDIDGCLKCGCSQFGSVREDCEQMTGRCVCKPGVKGSKCNECLDPNKKLGPNGCMP 138
Y ++D C C G+ + +C C PG +G C E +D + GP+ C+
Sbjct: 1184 CEY--EVDECQNQPCQNGGTCIDLVNHF--KCSCPPGTRGLLCEENIDDCAR-GPH-CLN 1237
Query: 139 G 139
G
Sbjct: 1238 G 1238
Score = 36 (17.7 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 6/13 (46%), Positives = 7/13 (53%)
Query: 162 CGSGANREDCPSD 174
C G N E+C D
Sbjct: 1518 CDQGCNSEECGWD 1530
Score = 35 (17.4 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 160 LDCGSGANRED----CPSDA 175
LD G+ AN +D CP A
Sbjct: 1897 LDAGADANAQDNMGRCPLHA 1916
WARNING: HSPs involving 116 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.139 0.488 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 189 189 0.00089 110 3 12 22 0.48 32
31 0.42 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 366
No. of states in DFA: 553 (59 KB)
Total size of DFA: 152 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.56u 0.13s 16.69t Elapsed: 00:00:03
Total cpu time: 16.71u 0.13s 16.84t Elapsed: 00:00:03
Start: Thu Aug 15 15:19:43 2013 End: Thu Aug 15 15:19:46 2013
WARNINGS ISSUED: 2