RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy11286
(335 letters)
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 267 bits (684), Expect = 1e-84
Identities = 110/275 (40%), Positives = 163/275 (59%), Gaps = 28/275 (10%)
Query: 13 VGFHKFLPKHIVDTSKPKTLRKTLQAHFKKIAQLSEKDCIMKFFEILKSQYKFDQELFRC 72
VG +F PK ++D+ K KTLRK +Q F++ A L+ ++ I+KFFEIL Y+FD+E F+C
Sbjct: 171 VGLRRFFPKSLLDSVKAKTLRKLIQQTFRQFANLNREESILKFFEILSPVYRFDKECFKC 230
Query: 73 ALGSGWSIPVDLVIGPDVGISYVTNRAPEPLKIADFSKIESIQTIFTKPDGTEKALLQLR 132
ALGS W I V+L IGP+ GISY+T++ P +ADF+++++IQ D K +LQL+
Sbjct: 231 ALGSSWIISVELAIGPEEGISYLTDKGANPTHLADFNQVQTIQY-SNSEDKDRKGMLQLK 289
Query: 133 VAGTPEVLIITCPSVSEAQSLAHLVNGYCRLHNNDAKSLWSKKGSRK------------- 179
+AG PE L +T PS++ A+++A L++GYCRL N +S +
Sbjct: 290 IAGAPEPLTVTAPSLTIAENMADLIDGYCRLVNGATQSFIIRPQKEGERALPSIPKLANN 349
Query: 180 QSQGDDHNGGSLLSSPAY-------------NDRNYELNRSQIELGEKIGDGQFGDVHRG 226
+ QG + S+ + Y + R+YE+ R +IELG IG+GQFGDVH+G
Sbjct: 350 EKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQG 409
Query: 227 VFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS 261
++ P+ + VA+KTCK T EKFL EA
Sbjct: 410 IYMS-PENPAMAVAIKTCKNCTSDSVREKFLQEAL 443
>4eku_A Protein-tyrosine kinase 2-beta; proline-rich tyrosine kinase 2,
FERM domain, transferase; 3.25A {Homo sapiens}
Length = 392
Score = 156 bits (396), Expect = 8e-45
Identities = 73/196 (37%), Positives = 105/196 (53%), Gaps = 10/196 (5%)
Query: 13 VGFHKFLPKHIVDTSKPKTLRKTLQAHFKKIAQLSEKDCIMKFFEILKSQYKFDQELFRC 72
VG F PK + + KPK RK +Q F++ A L E++C+MKFF L DQE +RC
Sbjct: 191 VGLDLFFPKQMQENLKPKQFRKMIQQTFQQYASLREEECVMKFFNTLAGFANIDQETYRC 250
Query: 73 ALGSGWSIPVDLVIGPDVGISYVTNRAPEPLKIADFSKIESIQTIFTKPDGTEKALLQLR 132
L GW+I VDLVIGP GI +T++ +P +A+F +I SI+ P +A+LQL
Sbjct: 251 ELIQGWNITVDLVIGPK-GIRQLTSQDAKPTCLAEFKQIRSIR---CLPLEEGQAVLQLG 306
Query: 133 VAGTPEVLIITCPSVSEAQSLAHLVNGYCRLHNNDAKSLWSKKGSRKQSQGDDHNGGSLL 192
+ G P+ L I S++EA+++A L++GYCRL SL + D SL
Sbjct: 307 IEGAPQALSIKTSSLAEAENMADLIDGYCRLQGEHQGSLII------HPRKDGEKRNSLP 360
Query: 193 SSPAYNDRNYELNRSQ 208
P N + S+
Sbjct: 361 QIPMLNLEARRSHLSE 376
>2al6_A Focal adhesion kinase 1; transferase; 2.35A {Gallus gallus} SCOP:
a.11.2.1 b.55.1.5 d.15.1.4 PDB: 2j0m_A* 2aeh_A
Length = 375
Score = 155 bits (392), Expect = 2e-44
Identities = 74/170 (43%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Query: 13 VGFHKFLPKHIVDTSKPKTLRKTLQAHFKKIAQLSEKDCIMKFFEILKSQYKFDQELFRC 72
VG +F PK ++D+ K KTLRK +Q F++ A L+ ++ I+KFFEIL Y+FD+E F+C
Sbjct: 171 VGLRRFFPKSLLDSVKAKTLRKLIQQTFRQFANLNREESILKFFEILSPVYRFDKECFKC 230
Query: 73 ALGSGWSIPVDLVIGPDVGISYVTNRAPEPLKIADFSKIESIQTIFTKPDGTEKALLQLR 132
ALGS W I V+L IGP+ GISY+T++ P +ADF+++++IQ D K +LQL+
Sbjct: 231 ALGSSWIISVELAIGPEEGISYLTDKGANPTHLADFNQVQTIQ-YSNSEDKDRKGMLQLK 289
Query: 133 VAGTPEVLIITCPSVSEAQSLAHLVNGYCRLHNNDAKSLWSKKGSRKQSQ 182
+AG PE L +T PS++ A+++A L++GYCRL N +S + +
Sbjct: 290 IAGAPEPLTVTAPSLTIAENMADLIDGYCRLVNGATQSFIIRPQKEGERA 339
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 85.7 bits (213), Expect = 4e-19
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 204 LNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS-- 261
L ++ + + +G G FG V++G++ P +K I VA+K + T P+ ++ LDEA
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 262 -----PNVC--LPCCTG 271
P+VC L C
Sbjct: 72 ASVDNPHVCRLLGICLT 88
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 84.6 bits (210), Expect = 5e-19
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 202 YELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS 261
Y + R + L +G+G FG+V+ GV+ INVAVKTCK D + EKF+ EA
Sbjct: 7 YGIAREDVVLNRILGEGFFGEVYEGVYTN-HKGEKINVAVKTCKKDCTLDNKEKFMSEAV 65
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 84.7 bits (210), Expect = 7e-19
Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 9/78 (11%)
Query: 203 ELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS- 261
+++ + +G G FG VH+GV+ P + I V +K + + ++ + D
Sbjct: 9 IFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLA 68
Query: 262 ------PNVC--LPCCTG 271
++ L C G
Sbjct: 69 IGSLDHAHIVRLLGLCPG 86
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 84.2 bits (209), Expect = 7e-19
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 197 YNDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKF 256
+ R+YE+ R +IELG IG+GQFGDVH+G++ P+ + VA+KTCK T EKF
Sbjct: 5 SSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMS-PENPALAVAIKTCKNCTSDSVREKF 63
Query: 257 LDEAS 261
L EA
Sbjct: 64 LQEAL 68
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 83.1 bits (206), Expect = 3e-18
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 196 AYNDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEK 255
A E++ S + + IG G+FG+V++G+ + K + VA+KT K +
Sbjct: 33 AVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD 92
Query: 256 FLDEAS 261
FL EA
Sbjct: 93 FLGEAG 98
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 81.5 bits (202), Expect = 6e-18
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 199 DRNYELNRSQIELGE-KIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFL 257
D+ L R + + + ++G G FG V +GV+R R + I+VA+K K T+ E+ +
Sbjct: 1 DKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQ--IDVAIKVLKQGTEKADTEEMM 58
Query: 258 DEAS 261
EA
Sbjct: 59 REAQ 62
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 82.0 bits (203), Expect = 7e-18
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 204 LNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS-- 261
L ++ + + +G G FG V++G++ P +K I VA+K + T P+ ++ LDEA
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 262 -----PNVC--LPCCTG 271
P+VC L C
Sbjct: 72 ASVDNPHVCRLLGICLT 88
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 81.2 bits (201), Expect = 1e-17
Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 9/85 (10%)
Query: 203 ELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS- 261
++ ++ +G+G FG V + P D + VAVK K D P+ + E
Sbjct: 27 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDI 86
Query: 262 ------PNVC--LPCCTGRYSESVL 278
++ CC + S+
Sbjct: 87 LRTLYHEHIIKYKGCCEDAGAASLQ 111
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 81.2 bits (201), Expect = 1e-17
Identities = 19/102 (18%), Positives = 33/102 (32%), Gaps = 13/102 (12%)
Query: 189 GSLLSSP---AYNDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCK 245
G ++S D + ++ +G+G FG V + P D + VAVK+ K
Sbjct: 1 GDIVSEKKPATEVDPT-HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLK 59
Query: 246 GDTDPETAEKFLDEAS-------PNVC--LPCCTGRYSESVL 278
++ E N+ CT +
Sbjct: 60 PESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 101
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 81.2 bits (201), Expect = 1e-17
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 196 AYNDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEK 255
A E+ S+I + + IG G G+V G R P + + VA+K K
Sbjct: 38 AGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRV-PGQRDVPVAIKALKAGYTERQRRD 96
Query: 256 FLDEAS 261
FL EAS
Sbjct: 97 FLSEAS 102
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 80.0 bits (198), Expect = 2e-17
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
Query: 195 PAYNDRN----YELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDT-- 248
A + + L EK+GDG FG V RG + P ++VAVK K D
Sbjct: 2 SAGEGPLQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDA-PSGKTVSVAVKCLKPDVLS 60
Query: 249 DPETAEKFLDEAS 261
PE + F+ E +
Sbjct: 61 QPEAMDDFIREVN 73
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 79.3 bits (196), Expect = 4e-17
Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 10/84 (11%)
Query: 203 ELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS- 261
+ ++ +++G G FG V + P D + VAVK + T E F E
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEI 64
Query: 262 ------PNVC--LPCCTGRYSESV 277
N+ C ++
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNL 88
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 79.7 bits (197), Expect = 4e-17
Identities = 20/98 (20%), Positives = 35/98 (35%), Gaps = 11/98 (11%)
Query: 189 GSLLSSPAYNDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDT 248
G++ S+ D + ++ +++G G FG V + P D + VAVK + T
Sbjct: 24 GAMGSAFEDRDP-TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST 82
Query: 249 DPETAEKFLDEAS-------PNVC--LPCCTGRYSESV 277
E F E N+ C ++
Sbjct: 83 -EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 80.1 bits (198), Expect = 5e-17
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 203 ELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS 261
EL+ + I + + +G G+FG+V G + P K I+VA+KT K + FL EAS
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKL-PSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 77.6 bits (192), Expect = 2e-16
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 188 GGSLLSSPAYNDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGD 247
GGS+ + + + LN +++L + IG G+FGDV G +R VAVK K D
Sbjct: 2 GGSVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNK------VAVKCIKND 55
Query: 248 TDPETAEKFLDEAS 261
TA+ FL EAS
Sbjct: 56 A---TAQAFLAEAS 66
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 78.5 bits (194), Expect = 2e-16
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 178 RKQSQGDDHNGGSLLSSPAYNDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVI 237
Q G +L D+ + LN + LGE+IG G FG+V G R
Sbjct: 86 LSTQQPLTKKSGVVLHRAVPKDK-WVLNHEDLVLGEQIGRGNFGEVFSGRLRADN----T 140
Query: 238 NVAVKTCKGDTDPETAEKFLDEAS 261
VAVK+C+ P+ KFL EA
Sbjct: 141 LVAVKSCRETLPPDLKAKFLQEAR 164
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 77.3 bits (191), Expect = 2e-16
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 199 DRNYELNRSQIELGEK-IGDGQFGDVHRGVFRPRPDKSVINVAVKTCK-GDTDPETAEKF 256
+ L+R + L +K +G G FG V +G ++ + K V VAVK K DP ++
Sbjct: 8 PKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMK--KVVKTVAVKILKNEANDPALKDEL 65
Query: 257 LDEAS 261
L EA+
Sbjct: 66 LAEAN 70
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 77.3 bits (191), Expect = 3e-16
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 10/94 (10%)
Query: 187 NGGSLLSSPAYNDRNYELNRSQIELGEKIGDGQFGDVHRGVFR-PRPDKSVINVAVKTCK 245
N ++ Y +E+ R +I + ++G G FG V+ GV + D+ VA+KT
Sbjct: 5 NPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN 64
Query: 246 GDTDPETAEKFLDEAS-------PNV--CLPCCT 270
+FL+EAS +V L +
Sbjct: 65 EAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 76.2 bits (188), Expect = 8e-16
Identities = 16/84 (19%), Positives = 28/84 (33%), Gaps = 10/84 (11%)
Query: 203 ELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS- 261
++ ++G G FG V + P D + VAVK + + P+ F E
Sbjct: 19 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ-HSGPDQQRDFQREIQI 77
Query: 262 ------PNVC--LPCCTGRYSESV 277
+ G +S+
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSL 101
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 74.9 bits (185), Expect = 1e-15
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 10/78 (12%)
Query: 203 ELNRSQIELGEKIGDGQFGDVHRGV-FRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS 261
E++ S + E++G+ +FG V++G F P P + VA+KT K + E+F EA
Sbjct: 5 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 64
Query: 262 -------PNV--CLPCCT 270
PNV L T
Sbjct: 65 LRARLQHPNVVCLLGVVT 82
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 75.0 bits (185), Expect = 1e-15
Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 4/63 (6%)
Query: 202 YELNRSQIELGEKIGDGQFGDVHRGVFRP---RPDKSVINVAVKTCKGDTDPETAEKFLD 258
+++ + E +G G F + +GV R V +K +E F +
Sbjct: 3 HKIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-RNYSESFFE 61
Query: 259 EAS 261
AS
Sbjct: 62 AAS 64
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 75.1 bits (185), Expect = 2e-15
Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 11/91 (12%)
Query: 190 SLLSSPAYNDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGD-T 248
+ + + Q LG +G G+FG V + D S + VAVK K D
Sbjct: 6 GISDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQ-EDGSFVKVAVKMLKADII 64
Query: 249 DPETAEKFLDEAS-------PNV--CLPCCT 270
E+FL EA+ P+V +
Sbjct: 65 ASSDIEEFLREAACMKEFDHPHVAKLVGVSL 95
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 75.6 bits (186), Expect = 2e-15
Identities = 33/129 (25%), Positives = 45/129 (34%), Gaps = 17/129 (13%)
Query: 157 VNGYCRLHNNDAKSLWSKKGSRKQSQGDDHNGGSLLSS------PAYNDRNYELNRSQIE 210
++G C + SL+ K GS + LS+ A + +
Sbjct: 34 LDGICSIEELS-TSLYKKAGSENLYFQGANTVHIDLSALNPELVQAVQHVVIGPSSLIVH 92
Query: 211 LGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS-------PN 263
E IG G FG V+ G D I+ AVK+ TD +FL E PN
Sbjct: 93 FNEVIGRGHFGCVYHGTLLD-NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 264 V--CLPCCT 270
V L C
Sbjct: 152 VLSLLGICL 160
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 74.7 bits (184), Expect = 3e-15
Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 10/82 (12%)
Query: 199 DRNYELNRSQIELGEKIGDGQFGDVHRG-VFRPRPDKSVINVAVKTCKGDTDPETAEKFL 257
+ E R+ IE IG+G FG V + P + VAVK K + + F
Sbjct: 39 LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQ 98
Query: 258 DEAS-------PNV--CLPCCT 270
EA+ PN+ L C
Sbjct: 99 REAALMAEFDNPNIVKLLGVCA 120
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 75.1 bits (185), Expect = 3e-15
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
Query: 195 PAYNDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAE 254
+ + LN +++L + IG G+FGDV G +R VAVK K D TA+
Sbjct: 181 DEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNK------VAVKCIKNDA---TAQ 231
Query: 255 KFLDEAS 261
FL EAS
Sbjct: 232 AFLAEAS 238
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 73.9 bits (182), Expect = 4e-15
Identities = 23/102 (22%), Positives = 36/102 (35%), Gaps = 18/102 (17%)
Query: 186 HNGGSLLSSPAYNDRNY-------ELNRSQIELGEKIGDGQFGDVHRG-VFRPRPDKSVI 237
GS L + Y + R I L ++G+G FG V P++ +
Sbjct: 13 EGKGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKM 72
Query: 238 NVAVKTCKGDTDPETAEKFLDEAS-------PNV--CLPCCT 270
VAVK K ++ + F EA ++ CT
Sbjct: 73 LVAVKALKEASESARQD-FQREAELLTMLQHQHIVRFFGVCT 113
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 73.5 bits (181), Expect = 4e-15
Identities = 23/77 (29%), Positives = 29/77 (37%), Gaps = 10/77 (12%)
Query: 203 ELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS- 261
+ + E IG G FG V+ G D I+ AVK+ TD +FL E
Sbjct: 21 GPSSLIVHFNEVIGRGHFGCVYHGTLLD-NDGKKIHCAVKSLNRITDIGEVSQFLTEGII 79
Query: 262 ------PNV--CLPCCT 270
PNV L C
Sbjct: 80 MKDFSHPNVLSLLGICL 96
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET;
nucleotide-binding, hirschsprung disease,
phosphorylation, disease mutation; HET: ACK; 2.00A {Homo
sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A*
2ivv_A*
Length = 314
Score = 73.8 bits (182), Expect = 5e-15
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 14/96 (14%)
Query: 189 GSLLSSPA----YNDRNYELNRSQIELGEKIGDGQFGDVHRG-VFRPRPDKSVINVAVKT 243
G L S D +E R + LG+ +G+G+FG V + F + VAVK
Sbjct: 1 GPLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM 60
Query: 244 CKGDTDPETAEKFLDEAS-------PNV--CLPCCT 270
K + P L E + P+V C+
Sbjct: 61 LKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACS 96
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 74.6 bits (183), Expect = 6e-15
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 199 DRNYELNRSQIELGE-KIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFL 257
D+ L R + + + ++G G FG V +GV+R R K I+VA+K K T+ E+ +
Sbjct: 327 DKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMR--KKQIDVAIKVLKQGTEKADTEEMM 384
Query: 258 DEAS-------PNVC 265
EA P +
Sbjct: 385 REAQIMHQLDNPYIV 399
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 73.0 bits (180), Expect = 6e-15
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 198 NDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFL 257
N +E+ R+ I + K+G GQ+G+V+ GV++ + VAVKT K DT E+FL
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS----LTVAVKTLKEDT--MEVEEFL 57
Query: 258 DEAS 261
EA+
Sbjct: 58 KEAA 61
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 72.7 bits (179), Expect = 9e-15
Identities = 20/78 (25%), Positives = 29/78 (37%), Gaps = 11/78 (14%)
Query: 203 ELNRSQIELGEKIGDGQFGDVHRG-VFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS 261
+ R I L ++G+G FG V + P K + VAVK K T + F EA
Sbjct: 11 HIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKD-FQREAE 69
Query: 262 -------PNV--CLPCCT 270
++ C
Sbjct: 70 LLTNLQHEHIVKFYGVCG 87
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 72.3 bits (178), Expect = 1e-14
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 15/99 (15%)
Query: 186 HNGGSLLSSPA----YNDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAV 241
H+ L+ + + ++R+ + LG+ +G+G+FG V G + + D + + VAV
Sbjct: 9 HHSSGLVPRGSEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLK-QEDGTSLKVAV 67
Query: 242 KTCKGD-TDPETAEKFLDEAS-------PNV--CLPCCT 270
KT K D + E+FL EA+ PNV L C
Sbjct: 68 KTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 72.3 bits (178), Expect = 1e-14
Identities = 23/88 (26%), Positives = 32/88 (36%), Gaps = 10/88 (11%)
Query: 193 SSPAYNDRNYELNRSQIELGEKIGDGQFGDVHRGVFR-PRPDKSVINVAVKTCKGDTDPE 251
+ E+ R I L +G G FG+V+ G D S + VAVKT +
Sbjct: 16 GKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ 75
Query: 252 TAEKFLDEAS-------PNV--CLPCCT 270
FL EA N+ C+
Sbjct: 76 DELDFLMEALIISKFNHQNIVRCIGVSL 103
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition,
juxtamembrane domain, transferase; 2.10A {Homo sapiens}
SCOP: d.144.1.7
Length = 344
Score = 72.3 bits (178), Expect = 1e-14
Identities = 25/109 (22%), Positives = 37/109 (33%), Gaps = 11/109 (10%)
Query: 173 SKKGSRKQSQGDDHNGGSLLSSPAYNDRNYELNRSQIELGEKIGDGQFGDVHRG-VFRPR 231
S+ + + D+ + D +E R +E G+ +G G FG V +
Sbjct: 11 SQLQMVQVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGIS 70
Query: 232 PDKSVINVAVKTCKGDTDPETAEKFLDEAS--------PNV--CLPCCT 270
I VAVK K D E + E N+ L CT
Sbjct: 71 KTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT 119
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 72.4 bits (178), Expect = 2e-14
Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 10/88 (11%)
Query: 193 SSPAYNDRNYELNRSQIELGEKIGDGQFGDVHRG-VFRPRPDKSVINVAVKTCKGDTDPE 251
+ E+ R I L +G G FG+V+ G V D S + VAVKT +
Sbjct: 57 GKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ 116
Query: 252 TAEKFLDEAS-------PNV--CLPCCT 270
FL EA N+ C+
Sbjct: 117 DELDFLMEALIISKFNHQNIVRCIGVSL 144
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 71.5 bits (176), Expect = 2e-14
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 195 PAYNDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAE 254
P + D +E+ R ++L E++G GQFG+V G + VAVK+ K + + +
Sbjct: 2 PWWEDE-WEVPRETLKLVERLGAGQFGEVWMGYYNGH-----TKVAVKSLKQGS--MSPD 53
Query: 255 KFLDEAS 261
FL EA+
Sbjct: 54 AFLAEAN 60
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 72.5 bits (178), Expect = 2e-14
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 192 LSSPAYNDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPE 251
+ + N +E+ R+ I + K+G GQ+G+V+ GV++ + VAVKT K DT
Sbjct: 205 IYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS----LTVAVKTLKEDT--M 258
Query: 252 TAEKFLDEAS 261
E+FL EA+
Sbjct: 259 EVEEFLKEAA 268
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; 2.40A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1xr0_A
Length = 370
Score = 72.0 bits (177), Expect = 3e-14
Identities = 25/111 (22%), Positives = 38/111 (34%), Gaps = 13/111 (11%)
Query: 173 SKKGSRKQSQGDDHNGGSLLSSPAYNDRNYELNRSQIELGEKIGDGQFGDVHRGV---FR 229
+ +R S D + D +E R ++ LG+ +G+G FG V
Sbjct: 47 VRITTRLSSTADTPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGID 106
Query: 230 PRPDKSVINVAVKTCKGDTDPETAEKFLDEAS--------PNV--CLPCCT 270
K + VAVK K D + + E N+ L CT
Sbjct: 107 KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 157
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 70.7 bits (174), Expect = 4e-14
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Query: 203 ELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS 261
EL R +I L +++G GQFG V G ++ + +VAVK K + E ++F EA
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWKGQ-----YDVAVKMIKEGSMSE--DEFFQEAQ 55
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 70.3 bits (173), Expect = 4e-14
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 202 YELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS 261
+ ++ S++ ++IG GQFG VH G + + VA+KT + + E F++EA
Sbjct: 3 WVIDPSELTFVQEIGSGQFGLVHLGYWLNK-----DKVAIKTIREGA--MSEEDFIEEAE 55
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 69.9 bits (172), Expect = 6e-14
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 202 YELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS 261
+E++ + +++G GQFG V G +R + +VA+K K + + ++F++EA
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQ-----YDVAIKMIKEGS--MSEDEFIEEAK 71
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis,
nucleotide-binding, inhibitor, phosphorylation receptor,
transferase, transmembrane; HET: 00J; 1.50A {Homo
sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A*
3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A*
2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A*
3cpc_A* ...
Length = 316
Score = 70.4 bits (173), Expect = 6e-14
Identities = 22/85 (25%), Positives = 31/85 (36%), Gaps = 11/85 (12%)
Query: 197 YNDRNYELNRSQIELGEKIGDGQFGDVHRG-VFRPRPDKSVINVAVKTCKGDTDPETAEK 255
Y+ +E R +++LG+ +G G FG V F + VAVK K
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 256 FLDEAS--------PNV--CLPCCT 270
+ E NV L CT
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACT 101
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; HET: PTR ACP; 1.80A
{Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A*
2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A*
3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A*
3js2_A* 3ky2_A ...
Length = 334
Score = 70.4 bits (173), Expect = 7e-14
Identities = 28/111 (25%), Positives = 38/111 (34%), Gaps = 15/111 (13%)
Query: 173 SKKGSRKQSQGDDHNGGSLLSSPAYNDRNYELNRSQIELGEKIGDGQFGDVHRGV---FR 229
S SQ G S P D +E R ++ LG+ +G+G FG V
Sbjct: 3 SSHHHHHHSQDPMLAGVSEYELP--EDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGID 60
Query: 230 PRPDKSVINVAVKTCKGDTDPETAEKFLDEAS--------PNV--CLPCCT 270
K + VAVK K D + + E N+ L CT
Sbjct: 61 KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene
homolog; kinase, structure, inhibitor, STI-571, gleevec,
transferase activator; HET: STI; 1.60A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Length = 313
Score = 70.0 bits (172), Expect = 9e-14
Identities = 21/96 (21%), Positives = 35/96 (36%), Gaps = 11/96 (11%)
Query: 186 HNGGSLLSSPAYNDRNYELNRSQIELGEKIGDGQFGDVHRG-VFRPRPDKSVINVAVKTC 244
+N + + D +E R+++ G+ +G G FG V + + + VAVK
Sbjct: 2 NNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML 61
Query: 245 KGDTDPETAEKFLDEAS--------PNV--CLPCCT 270
K E + E N+ L CT
Sbjct: 62 KPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT 97
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain,
kinase inhibitor complex, transferase; HET: 5CN; 1.80A
{Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A*
3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Length = 333
Score = 69.6 bits (171), Expect = 1e-13
Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 11/98 (11%)
Query: 184 DDHNGGSLLSSPAYNDRNYELNRSQIELGEKIGDGQFGDVHRG-VFRPRPDKSVINVAVK 242
+ ++ + + + +E R+ ++ G+ +G G FG V F + +V+ VAVK
Sbjct: 23 EGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK 82
Query: 243 TCKGDTDPETAEKFLDEAS--------PNV--CLPCCT 270
K + E + E N+ L CT
Sbjct: 83 MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT 120
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 69.2 bits (170), Expect = 1e-13
Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 10/74 (13%)
Query: 206 RSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS---- 261
R IG G FG V+ G + ++ I A+K+ T+ + E FL E
Sbjct: 20 RVVTHSDRVIGKGHFGVVYHGEYID-QAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRG 78
Query: 262 ---PNV--CLPCCT 270
PNV +
Sbjct: 79 LNHPNVLALIGIML 92
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A
{Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A*
2p4i_A* 3l8p_A* 2wqb_A*
Length = 327
Score = 69.2 bits (170), Expect = 2e-13
Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 12/78 (15%)
Query: 203 ELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS- 261
L+ + I+ + IG+G FG V + + D ++ A+K K + F E
Sbjct: 21 VLDWNDIKFQDVIGEGNFGQVLKARI--KKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 78
Query: 262 -------PNV--CLPCCT 270
PN+ L C
Sbjct: 79 LCKLGHHPNIINLLGACE 96
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 69.8 bits (171), Expect = 2e-13
Identities = 28/111 (25%), Positives = 42/111 (37%), Gaps = 19/111 (17%)
Query: 151 QSLAHLVNGYCRLHNNDAKSLWSKKGSRKQSQGDDHNGGSLLSSPAYNDRNYELNRSQIE 210
SL LV Y ++ A L + + + + +E+ R +
Sbjct: 140 NSLQQLVA-Y---YSKHADGLCHRLTTVCPTSKP--------QTQGLAKDAWEIPRESLR 187
Query: 211 LGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS 261
L K+G G FG+V G + VA+KT K T + E FL EA
Sbjct: 188 LEVKLGQGCFGEVWMGTWNGT-----TRVAIKTLKPGT--MSPEAFLQEAQ 231
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET: 07J;
2.80A {Homo sapiens}
Length = 382
Score = 69.3 bits (170), Expect = 2e-13
Identities = 23/87 (26%), Positives = 32/87 (36%), Gaps = 13/87 (14%)
Query: 197 YNDRNYELNRSQIELGEKIGDGQFGDVHRGV---FRPRPDKSVINVAVKTCKGDTDPETA 253
D +EL R ++ LG+ +G+G FG V V VAVK K D +
Sbjct: 59 PEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL 118
Query: 254 EKFLDEAS--------PNV--CLPCCT 270
+ E N+ L CT
Sbjct: 119 SDLISEMEMMKMIGKHKNIINLLGACT 145
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 68.0 bits (166), Expect = 8e-13
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Query: 202 YELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS 261
+E+ R + L K+G G FG+V G + VA+KT K T + E FL EA
Sbjct: 262 WEIPRESLRLEVKLGQGCFGEVWMGTWNGT-----TRVAIKTLKPGT--MSPEAFLQEAQ 314
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 67.0 bits (164), Expect = 2e-12
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 195 PAYNDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAE 254
+ +E+ R ++L +K+G GQFG+V + VAVKT K + + E
Sbjct: 176 KPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKH-----TKVAVKTMKPGS--MSVE 228
Query: 255 KFLDEAS 261
FL EA+
Sbjct: 229 AFLAEAN 235
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 63.5 bits (155), Expect = 1e-11
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 15/73 (20%)
Query: 202 YELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCK-GDTDPETAEKFLDEA 260
+E+ S++ L +IG G FG V++G + +VAVK K D PE + F +E
Sbjct: 31 WEIEASEVMLSTRIGSGSFGTVYKGKWH-------GDVAVKILKVVDPTPEQFQAFRNEV 83
Query: 261 S-------PNVCL 266
+ N+ L
Sbjct: 84 AVLRKTRHVNILL 96
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 61.2 bits (149), Expect = 6e-11
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 15/73 (20%)
Query: 202 YELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCK-GDTDPETAEKFLDEA 260
+E+ QI +G++IG G FG V++G + +VAVK P+ + F +E
Sbjct: 19 WEIPDGQITVGQRIGSGSFGTVYKGKWHG-------DVAVKMLNVTAPTPQQLQAFKNEV 71
Query: 261 S-------PNVCL 266
N+ L
Sbjct: 72 GVLRKTRHVNILL 84
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 60.7 bits (147), Expect = 1e-10
Identities = 22/85 (25%), Positives = 31/85 (36%), Gaps = 11/85 (12%)
Query: 197 YNDRNYELNRSQIELGEKIGDGQFGDVHRG-VFRPRPDKSVINVAVKTCKGDTDPETAEK 255
Y+ +E R +++LG+ +G G FG V F + VAVK K
Sbjct: 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 71
Query: 256 FLDEAS--------PNVC--LPCCT 270
+ E NV L CT
Sbjct: 72 LMSELKILIHIGHHLNVVNLLGACT 96
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 60.4 bits (147), Expect = 2e-10
Identities = 18/71 (25%), Positives = 25/71 (35%), Gaps = 12/71 (16%)
Query: 203 ELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS- 261
S + GE +G G FG + R ++ + +K D ET FL E
Sbjct: 6 IFRPSDLIHGEVLGKGCFGQAIKVTHR----ETGEVMVMKELI-RFDEETQRTFLKEVKV 60
Query: 262 ------PNVCL 266
PNV
Sbjct: 61 MRCLEHPNVLK 71
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 60.1 bits (146), Expect = 2e-10
Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 15/98 (15%)
Query: 177 SRKQSQGDDHNGGSLLSSPAYNDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSV 236
S + S + + +++ Q+E+GE IG G+FG V+ G +
Sbjct: 3 EMNLSLLSARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGE----- 57
Query: 237 INVAVKTCK-GDTDPETAEKFLDEAS-------PNVCL 266
VA++ + + + F E NV L
Sbjct: 58 --VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVL 93
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 59.6 bits (145), Expect = 2e-10
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 16/74 (21%)
Query: 203 ELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETA---EKFLDE 259
E++ +++ L E IG G FG V+R + VAVK + D D + + E E
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRAFWIGDE------VAVKAARHDPDEDISQTIENVRQE 56
Query: 260 AS-------PNVCL 266
A PN+
Sbjct: 57 AKLFAMLKHPNIIA 70
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 58.1 bits (141), Expect = 7e-10
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 14/85 (16%)
Query: 190 SLLSSPAYNDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCK-GDT 248
+L A + + ++ + + EKIG G FG VHR + VAVK D
Sbjct: 20 NLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSD------VAVKILMEQDF 73
Query: 249 DPETAEKFLDEAS-------PNVCL 266
E +FL E + PN+ L
Sbjct: 74 HAERVNEFLREVAIMKRLRHPNIVL 98
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 57.7 bits (140), Expect = 9e-10
Identities = 22/101 (21%), Positives = 34/101 (33%), Gaps = 24/101 (23%)
Query: 189 GSLLSSPAYNDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDT 248
G++ S R L ++IE ++IG G FG VH+G VA+K+
Sbjct: 1 GAMGGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDK----SVVAIKSLILGD 56
Query: 249 DPETA------EKFLDEAS-------PNVCL-------PCC 269
++F E PN+ P
Sbjct: 57 SEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR 97
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 56.9 bits (138), Expect = 2e-09
Identities = 13/76 (17%), Positives = 29/76 (38%), Gaps = 14/76 (18%)
Query: 199 DRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCK-GDTDPETAEKFL 257
+++ ++ Q+ K+ + G++ +G ++ + VK K D + F
Sbjct: 2 NKHSGIDFKQLNFLTKLNENHSGELWKGRWQGND------IVVKVLKVRDWSTRKSRDFN 55
Query: 258 DEAS-------PNVCL 266
+E PNV
Sbjct: 56 EECPRLRIFSHPNVLP 71
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 48.5 bits (116), Expect = 1e-06
Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 23/82 (28%)
Query: 202 YELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS 261
+ ++ +IE+ E +G G FG V + +R + VA+K + + F+ E
Sbjct: 3 HMIDYKEIEVEEVVGRGAFGVVCKAKWRAKD------VAIKQIE---SESERKAFIVELR 53
Query: 262 -------PNVCL-------PCC 269
PN+ P C
Sbjct: 54 QLSRVNHPNIVKLYGACLNPVC 75
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 45.1 bits (107), Expect = 2e-05
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Query: 193 SSPAYNDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVK 242
S QI++ ++IG G++G+V G +R VAVK
Sbjct: 23 SGSGLPLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWRGEK------VAVK 66
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 44.4 bits (105), Expect = 3e-05
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Query: 201 NYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVK 242
L+ ++L E IG G++G V++G RP VAVK
Sbjct: 7 EPSLDLDNLKLLELIGRGRYGAVYKGSLDERP------VAVK 42
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 44.7 bits (105), Expect = 4e-05
Identities = 72/400 (18%), Positives = 123/400 (30%), Gaps = 120/400 (30%)
Query: 4 LFLYKTLLLVGFHKFLPKH---IVDTSKPKTLRKTLQAHFKK-IAQLSEKDCIMKFFEIL 59
F + L F+K LP+ +P T + L F ++ L E + +F ++L
Sbjct: 26 SFFIASQLQEQFNKILPEPTEGFAADDEPTTPAE-LVGKFLGYVSSLVEPSKVGQFDQVL 84
Query: 60 KSQYK-FDQELFRC----ALGSGWSIPVDLVIGPDVGI--SYVTNR--APEPLKIADFSK 110
F+ AL + D + + +Y+T R A P S
Sbjct: 85 NLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSA 144
Query: 111 -IESIQ-------TIFTKPDG----TEKALLQLR---VAGTPEV--LIITCPSVSEAQSL 153
++ IF G T+ +LR V LI A++L
Sbjct: 145 LFRAVGEGNAQLVAIF----GGQGNTDDYFEELRDLYQTYHVLVGDLIKFS-----AETL 195
Query: 154 AHLVNGYCRLHNNDAKSLWSKKGSRKQSQGDDHNGGSLLSSPAYN-DRNYELNRSQIELG 212
+ L+ DA+ ++ +QG + L +P+ D++Y L I
Sbjct: 196 SELIR-----TTLDAEKVF--------TQGLNI--LEWLENPSNTPDKDY-LLSIPISCP 239
Query: 213 EKIGDGQFG---------DVHRGVFRPRP------DKSVINVAVKTCKGDTDP---ETAE 254
IG Q G R + ++ AV + D+ +
Sbjct: 240 -LIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLV-TAVAIAETDSWESFFVSVR 297
Query: 255 KFLD----------EASPNVCLPCCTGRYSESVLYGDSLVAKTGAIASESNVEVEE---- 300
K + EA PN LP E ++E E
Sbjct: 298 KAITVLFFIGVRCYEAYPNTSLP---------------------PSILEDSLENNEGVPS 336
Query: 301 --LE-RRLRQQQLES--EEDSKWLAEEE---INLRFDRRN 332
L L Q+Q++ + + L + I+L +N
Sbjct: 337 PMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKN 376
Score = 37.3 bits (86), Expect = 0.007
Identities = 23/128 (17%), Positives = 38/128 (29%), Gaps = 40/128 (31%)
Query: 20 PKHIVDTSKPKTLRKTLQAHFKKIAQLSEKD------------CIMKFFEILK---SQY- 63
K++V + P++L L +K S D +F + S
Sbjct: 374 AKNLVVSGPPQSLY-GLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHLL 432
Query: 64 -----KFDQELFRCAL---GSGWSIPV-DLVIGPDVGISYVTNRAPEPLKIADFSKIESI 114
+++L + + IPV D G D L++ S E I
Sbjct: 433 VPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSD-------------LRVLSGSISERI 479
Query: 115 -QTIFTKP 121
I P
Sbjct: 480 VDCIIRLP 487
Score = 33.5 bits (76), Expect = 0.10
Identities = 39/179 (21%), Positives = 60/179 (33%), Gaps = 56/179 (31%)
Query: 22 HIVDTSK-----PKTLRKTLQA---HFKKI---AQLSEKDCIMKFFEILKSQYKFDQELF 70
H V T+K P LR L+ H + + ++E D FF ++ LF
Sbjct: 248 HYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITV---LF 304
Query: 71 RCALGSGW----SIPVDLVIGPDVGISYVTNR--APEP-LKIADFSKIESIQTIFTK--- 120
G + P + P + + N P P L I++ ++ E +Q K
Sbjct: 305 FI----GVRCYEAYPN-TSLPPSILEDSLENNEGVPSPMLSISNLTQ-EQVQDYVNKTNS 358
Query: 121 --PDGTEKALLQLR-------VAGTPEVLIITCPSVSEAQSLAHLVNGYCRLHNNDAKS 170
P G ++ + L V+G P QSL L L A S
Sbjct: 359 HLPAG-KQVEISLVNGAKNLVVSGPP-------------QSLYGLNL---TLRKAKAPS 400
Score = 28.1 bits (62), Expect = 6.1
Identities = 19/127 (14%), Positives = 34/127 (26%), Gaps = 56/127 (44%)
Query: 12 LVGFHKFLPKHIVDTSKPKTLRKTLQAHF-----KKIAQLSEKDCIMKFFEILKSQYK-- 64
L ++FLP + P F + L KD + +
Sbjct: 414 LKFSNRFLP-----VASP----------FHSHLLVPASDLINKDLVKNNVSFNAKDIQIP 458
Query: 65 -FD---------------QELFRCALGSGWSIPVD------------LVIGPDV--GISY 94
+D + + C + +PV L GP G+
Sbjct: 459 VYDTFDGSDLRVLSGSISERIVDCII----RLPVKWETTTQFKATHILDFGPGGASGLGV 514
Query: 95 VTNRAPE 101
+T+R +
Sbjct: 515 LTHRNKD 521
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 42.8 bits (101), Expect = 8e-05
Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 6/50 (12%)
Query: 193 SSPAYNDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVK 242
S I L E IG G+FG+V RG +R VAVK
Sbjct: 28 SGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKWRGEE------VAVK 71
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 42.0 bits (99), Expect = 2e-04
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 6/35 (17%)
Query: 208 QIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVK 242
I L E IG G+FG+V RG +R VAVK
Sbjct: 4 TIVLQESIGKGRFGEVWRGKWRGEE------VAVK 32
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 41.9 bits (99), Expect = 2e-04
Identities = 22/92 (23%), Positives = 33/92 (35%), Gaps = 17/92 (18%)
Query: 199 DRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLD 258
+ +NR EL E IG G V P+ +K VA+K + + ++ L
Sbjct: 7 ALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEK----VAIKRINLEKCQTSMDELLK 62
Query: 259 EA-------SPNVCLPCCTGRYSESVLYGDSL 283
E PN+ Y S + D L
Sbjct: 63 EIQAMSQCHHPNIV------SYYTSFVVKDEL 88
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 41.6 bits (98), Expect = 2e-04
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 6/35 (17%)
Query: 208 QIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVK 242
I L E +G G++G+V RG ++ VAVK
Sbjct: 9 DITLLECVGKGRYGEVWRGSWQGEN------VAVK 37
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 40.1 bits (94), Expect = 6e-04
Identities = 13/57 (22%), Positives = 18/57 (31%), Gaps = 6/57 (10%)
Query: 186 HNGGSLLSSPAYNDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVK 242
H+ S N ++L E G+FG V + VAVK
Sbjct: 3 HHHHHHSSGVDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNE------YVAVK 53
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 38.8 bits (91), Expect = 0.002
Identities = 14/76 (18%), Positives = 33/76 (43%), Gaps = 12/76 (15%)
Query: 198 NDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFL 257
+++++ ++ +IG G +G V++ V +P S +AVK + D + ++ L
Sbjct: 13 PEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKP----SGQIMAVKRIRSTVDEKEQKQLL 68
Query: 258 DE--------ASPNVC 265
+ P +
Sbjct: 69 MDLDVVMRSSDCPYIV 84
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 38.7 bits (90), Expect = 0.002
Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 11/96 (11%)
Query: 177 SRKQSQGDDHNGGSLLSSPAYNDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSV 236
++ + D+ L + + EL E ++G G G V + +P S
Sbjct: 3 KLEELELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKP----SG 58
Query: 237 INVAVKTCKGDTDPETAEKFLDE-------ASPNVC 265
+ +A K + P + + E SP +
Sbjct: 59 LVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 39.1 bits (91), Expect = 0.002
Identities = 11/53 (20%), Positives = 19/53 (35%), Gaps = 7/53 (13%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVIN--VAVKTCKGDTDPETAEKFLDEA 260
E+ I G G ++ + D++V V +K D E + E
Sbjct: 83 EVKGCIAHGGLGWIYLAL-----DRNVNGRPVVLKGLVHSGDAEAQAMAMAER 130
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 38.1 bits (89), Expect = 0.003
Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 12/76 (15%)
Query: 198 NDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFL 257
++N+E+ +E ++G G +G V + P S +AVK + + + ++ L
Sbjct: 42 GNQNFEVKADDLEPIMELGRGAYGVVEKMRHVP----SGQIMAVKRIRATVNSQEQKRLL 97
Query: 258 DE--------ASPNVC 265
+ P
Sbjct: 98 MDLDISMRTVDCPFTV 113
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 37.8 bits (88), Expect = 0.003
Identities = 22/85 (25%), Positives = 30/85 (35%), Gaps = 9/85 (10%)
Query: 143 TCPSVSEAQSLAHLVNGYCRLHNNDAKSLWSKKGSRKQSQGDDHNGGSLLSSPAYNDRNY 202
S +A SLA L S S K R + +D+ G L D Y
Sbjct: 3 GSVSSGQAHSLASLAK---------TWSSGSAKLQRLGPETEDNEGVLLTEKLKPVDYEY 53
Query: 203 ELNRSQIELGEKIGDGQFGDVHRGV 227
+ ++G G FG+VHR
Sbjct: 54 REEVHWMTHQPRVGRGSFGEVHRMK 78
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 37.6 bits (88), Expect = 0.003
Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 12/73 (16%)
Query: 201 NYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDE- 259
+ E+ +E ++G G +G V + P S +AVK + + + ++ L +
Sbjct: 1 SMEVKADDLEPIMELGRGAYGVVEKMRHVP----SGQIMAVKRIRATVNSQEQKRLLMDL 56
Query: 260 -------ASPNVC 265
P
Sbjct: 57 DISMRTVDCPFTV 69
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 37.0 bits (86), Expect = 0.006
Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 12/76 (15%)
Query: 198 NDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFL 257
+ Y+ + +E ++G G G V + FR + +AVK + + E ++ L
Sbjct: 16 GGQRYQAEINDLENLGEMGSGTCGQVWKMRFRK----TGHVIAVKQMRRSGNKEENKRIL 71
Query: 258 DE--------ASPNVC 265
+ P +
Sbjct: 72 MDLDVVLKSHDCPYIV 87
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 35.4 bits (82), Expect = 0.017
Identities = 21/81 (25%), Positives = 28/81 (34%), Gaps = 17/81 (20%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDE-------ASP 262
EKIG G FG+V +G+ VA+K + + E E SP
Sbjct: 25 TKLEKIGKGSFGEVFKGIDNRTQKV----VAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 80
Query: 263 NVCLPCCTGRYSESVLYGDSL 283
V +Y S L L
Sbjct: 81 YVT------KYYGSYLKDTKL 95
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 35.6 bits (82), Expect = 0.021
Identities = 13/97 (13%), Positives = 33/97 (34%), Gaps = 6/97 (6%)
Query: 164 HNNDAKSLWSKKGSRKQSQGDDHNGGSLLSSPAYNDRNYELNRSQIELGEKIGDGQFGDV 223
+ K + K R+ D + + + + + ++IG G V
Sbjct: 13 RGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKV 72
Query: 224 HRGVFRPRPDKSVINVAVKT-CKGDTDPETAEKFLDE 259
+ + ++ A+K + D +T + + +E
Sbjct: 73 FQVL-----NEKKQIYAIKYVNLEEADNQTLDSYRNE 104
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 35.4 bits (82), Expect = 0.022
Identities = 13/80 (16%), Positives = 30/80 (37%), Gaps = 16/80 (20%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAE-----KFLDE-ASPN 263
E+ ++GDG FG V++ + ++ A K + ++ E + + L P
Sbjct: 22 EIVGELGDGAFGKVYKAKNK----ETGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 77
Query: 264 VCLPCCTGRYSESVLYGDSL 283
+ + + + L
Sbjct: 78 IV------KLLGAYYHDGKL 91
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 35.0 bits (81), Expect = 0.023
Identities = 12/76 (15%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
Query: 185 DHNGGSLLSSPAYNDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKT- 243
H+ G L + ++ + + ++IG G V + + ++ A+K
Sbjct: 6 HHSSGVDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVL-----NEKKQIYAIKYV 60
Query: 244 CKGDTDPETAEKFLDE 259
+ D +T + + +E
Sbjct: 61 NLEEADNQTLDSYRNE 76
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein
cargo binding, cargo proteins, motor protein-protein
transport complex; 2.80A {Mus musculus}
Length = 655
Score = 35.3 bits (80), Expect = 0.029
Identities = 20/179 (11%), Positives = 56/179 (31%), Gaps = 15/179 (8%)
Query: 16 HKFLPKHIVDTSKP--KTLRKTLQAHFKKIA---QLSEKDCIMKFFEILKSQYK-FDQEL 69
++P + K K + + AH K I + + + ++
Sbjct: 420 PTYIPDREITPLKNLEKWAQLAIAAHKKGIYAQRRTDSQKVKEDVVNYARFKWPLLFSRF 479
Query: 70 FRCALGS-GWSIPVDLVIGPD-VGISYVTNRAPEPLKIADFSKIESIQTIFTKPDGTEKA 127
+ S D+++ + G+ +V + L+++ F +I ++ + A
Sbjct: 480 YEAYKFSGPPLPKSDVIVAVNWTGVYFVDEQEQVLLELS-FPEIMAVSSS---RGTKMMA 535
Query: 128 LLQLRVAGTPEVLIITCPSVSEAQSLAHLVNGYCRLHNNDAKSLWSKKGSRKQSQGDDH 186
+ T A+ + LV + +K + + + + + +
Sbjct: 536 PSFTLATIKGDEYTFTSS---NAEDIRDLVVTFLEGLRKRSKYVVALQDNPNPAGEESG 591
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 35.0 bits (81), Expect = 0.030
Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 7/79 (8%)
Query: 165 NNDAKSLWSKKGSRKQSQGDDHNGGSLLSSPAYN-DRNYELNRSQIELGEKIGDGQFGDV 223
N + R+ S + L SP Y+ R + + ++G G +G+V
Sbjct: 16 ENLYFQSMHQLQPRRVSFRGE--ASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEV 73
Query: 224 HRGVFRPRPDKSVINVAVK 242
+ R + D + AVK
Sbjct: 74 FKV--RSKEDGRL--YAVK 88
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 34.5 bits (80), Expect = 0.032
Identities = 15/55 (27%), Positives = 20/55 (36%), Gaps = 10/55 (18%)
Query: 210 ELGEKIGDGQFGDVHRG--VFRPRPDKSVINVAVKTCKGD--TDPETAEKFLDEA 260
L +G G GDV+ R R VA+K +DP + EA
Sbjct: 37 RLRRLVGRGGMGDVYEAEDTVRERI------VALKLMSETLSSDPVFRTRMQREA 85
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 33.8 bits (78), Expect = 0.060
Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 14/57 (24%)
Query: 210 ELGEKIGDGQFGDVHRGV----FRPRPDKSVINVAVKTCKGD--TDPETAEKFLDEA 260
ELGE +G G +VH R VAVK + D DP +F EA
Sbjct: 15 ELGEILGFGGMSEVHLARDLRDHRD--------VAVKVLRADLARDPSFYLRFRREA 63
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 33.4 bits (77), Expect = 0.075
Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 6/53 (11%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGD--TDPETAEKFLDEA 260
++ +K+G G V+ + VA+K ET ++F E
Sbjct: 14 KIVDKLGGGGMSTVYLAEDT-ILNI---KVAIKAIFIPPREKEETLKRFEREV 62
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 33.5 bits (76), Expect = 0.099
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDE 259
E+ E++G G FG V R + + ++ VA+K C+ + P+ E++ E
Sbjct: 17 EMKERLGTGGFGYVLRWIHQDTGEQ----VAIKQCRQELSPKNRERWCLE 62
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 32.7 bits (75), Expect = 0.13
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPE 251
EL E +G+G +G V++G K+ A+K D E
Sbjct: 27 ELVELVGNGTYGQVYKGRHV----KTGQLAAIKVMDVTGDEE 64
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 32.4 bits (74), Expect = 0.15
Identities = 8/66 (12%), Positives = 14/66 (21%), Gaps = 17/66 (25%)
Query: 210 ELGEKIGDGQFGDVHRGV--FRPRPDKSVINVAVKTCKGD--TDPETAEKFLDEA----- 260
L G + + R VA+ + ++ L
Sbjct: 34 RLLIFHGGVPPLQFWQALDTALDRQ------VALTFVDPQGVLPDDVLQETLSRTLRLSR 87
Query: 261 --SPNV 264
P V
Sbjct: 88 IDKPGV 93
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 32.8 bits (75), Expect = 0.16
Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 13/63 (20%)
Query: 198 NDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKT-CKGDTDPETAEKF 256
R Y + ++IG G V + + ++ A+K + D +T + +
Sbjct: 7 KGRIYSI-------LKQIGSGGSSKVFQVL-----NEKKQIYAIKYVNLEEADNQTLDSY 54
Query: 257 LDE 259
+E
Sbjct: 55 RNE 57
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 32.9 bits (75), Expect = 0.16
Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 8/76 (10%)
Query: 174 KKGSRKQSQGDDHNGGSLLSSPAYNDRNYELNRSQI----ELGEKIGDGQFGDVHRGVFR 229
K K + +++ Y + E+ + ++ E++G G FG VHR R
Sbjct: 120 KIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTER 179
Query: 230 PRPDKSVINVAVKTCK 245
+ N A K
Sbjct: 180 ----ATGNNFAAKFVM 191
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 32.3 bits (74), Expect = 0.17
Identities = 26/123 (21%), Positives = 36/123 (29%), Gaps = 26/123 (21%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS-------P 262
E +G G FG V + R D A+K K E L E
Sbjct: 9 EEIAVLGQGAFGQVVKA--RNALDSRY--YAIK--KIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 263 NVCLPCCTGRYSESVLYGDSLVAKTGAIASESN-------VEVEELERRLRQQQLESEED 315
V RY + L + V A+ +S E L + + L + D
Sbjct: 63 YVV------RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRD 116
Query: 316 SKW 318
W
Sbjct: 117 EYW 119
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 32.7 bits (75), Expect = 0.17
Identities = 14/64 (21%), Positives = 21/64 (32%), Gaps = 12/64 (18%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKT-CKGDTDPETAEKFLDEAS------- 261
+ +G G FG+V + R + AVK K + L E
Sbjct: 25 NIVCMLGKGSFGEVLKCKDR----ITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 262 PNVC 265
PN+
Sbjct: 81 PNIM 84
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 32.3 bits (74), Expect = 0.19
Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 19/83 (22%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKT--CKGDTDPETAEKFLDEA------- 260
+ +KIG GQF +V+R D VA+K D + + E
Sbjct: 35 RIEKKIGRGQFSEVYRA--ACLLDGVP--VALKKVQIFDLMDAKARADCIKEIDLLKQLN 90
Query: 261 SPNVCLPCCTGRYSESVLYGDSL 283
PNV +Y S + + L
Sbjct: 91 HPNVI------KYYASFIEDNEL 107
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 32.2 bits (74), Expect = 0.19
Identities = 14/63 (22%), Positives = 21/63 (33%), Gaps = 12/63 (19%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKT-CKGDTDPETAEKFLDEAS------- 261
+ +G G FG+V + R + AVK K + L E
Sbjct: 25 NIVCMLGKGSFGEVLKCKDR----ITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 262 PNV 264
PN+
Sbjct: 81 PNI 83
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 32.4 bits (74), Expect = 0.20
Identities = 10/50 (20%), Positives = 18/50 (36%), Gaps = 4/50 (8%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDE 259
L + +G G +V RG + D A+K + + + E
Sbjct: 12 LLSDILGQGATANVFRGRHKKTGDL----FAIKVFNNISFLRPVDVQMRE 57
>3lez_A Beta-lactamase; antibiotic resistance, halotolerant, DEEP- SEA
bacterium, hydrolase; HET: EPE; 1.25A {Oceanobacillus
iheyensis}
Length = 260
Score = 32.2 bits (73), Expect = 0.20
Identities = 13/54 (24%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 209 IELGEKIGDGQFGDVH-RGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS 261
+G+K G G +G + G+ P D+ I +A+ + + + D + +K +++A+
Sbjct: 198 WTVGDKTGAGGYGTRNDIGIIWPEGDEEPIVIAIMSSRDEEDADYDDKLIEKAT 251
>1bsg_A Beta lactamase, penicillinase; hydrolase, antibiotic resistance;
1.85A {Streptomyces albus} SCOP: e.3.1.1
Length = 266
Score = 31.9 bits (72), Expect = 0.23
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 209 IELGEKIGDGQFGDVHR-GVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS 261
LG+K G G++G + GV P P ++ I + V T K + D + + +A+
Sbjct: 206 WTLGDKTGAGRYGTNNDAGVTWP-PGRAPIVLTVLTAKTEQDAARDDGLVADAA 258
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 32.1 bits (73), Expect = 0.26
Identities = 10/50 (20%), Positives = 18/50 (36%), Gaps = 4/50 (8%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDE 259
L + +G G +V RG + D A+K + + + E
Sbjct: 12 LLSDILGQGATANVFRGRHKKTGDL----FAIKVFNNISFLRPVDVQMRE 57
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 31.3 bits (70), Expect = 0.27
Identities = 11/57 (19%), Positives = 25/57 (43%), Gaps = 10/57 (17%)
Query: 284 VAKTGAIASESNVEV-----EELERRLRQQQLESEED-SKWL--AEEEINLRFDRRN 332
+A+ + E E EE +RL++ S+ +W A++++ R++
Sbjct: 74 IAQADRLTQEP--ESIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQS 128
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein
kinase, transferase; HET: SEP TPO ANP; 2.20A
{Arabidopsis thaliana} PDB: 3tl8_A*
Length = 326
Score = 31.4 bits (72), Expect = 0.34
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
Query: 214 KIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDE 259
+G G FG V++G D ++ VAVK K + +F E
Sbjct: 37 ILGRGGFGKVYKGRL---ADGTL--VAVKRLKEERTQGGELQFQTE 77
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 31.4 bits (72), Expect = 0.36
Identities = 12/36 (33%), Positives = 15/36 (41%), Gaps = 4/36 (11%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCK 245
+ E +G G+FG VHR V S K K
Sbjct: 8 MIAEDLGRGEFGIVHRCVET----SSKKTYMAKFVK 39
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 31.2 bits (71), Expect = 0.40
Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 8/76 (10%)
Query: 174 KKGSRKQSQGDDHNGGSLLSSPAYNDRNYELNRSQI----ELGEKIGDGQFGDVHRGVFR 229
+G + +D++ Y + E+ + + ++ E++G G FG VHR V +
Sbjct: 14 VRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEK 73
Query: 230 PRPDKSVINVAVKTCK 245
+ K
Sbjct: 74 ----ATGRVFVAKFIN 85
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 31.6 bits (72), Expect = 0.40
Identities = 13/65 (20%), Positives = 20/65 (30%), Gaps = 13/65 (20%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTC--KGDTDPETAEKFLDEAS------ 261
+ +G G FG+V + + AVK + E L E
Sbjct: 29 KGQRVLGKGSFGEVILCKDK----ITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 262 -PNVC 265
PN+
Sbjct: 85 HPNIM 89
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 31.2 bits (70), Expect = 0.45
Identities = 9/55 (16%), Positives = 18/55 (32%), Gaps = 6/55 (10%)
Query: 208 QIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVK--TCKGDTDPETAEKFLDEA 260
+++L E + G V R + A+K T + E+ +
Sbjct: 63 KLKLVEPLRVGDRSVVFLVRDVERLED----FALKVFTMGAENSRSELERLHEAT 113
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 31.1 bits (70), Expect = 0.50
Identities = 8/47 (17%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Query: 200 RNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVIN-VAVKTCK 245
++L + + +G+G F V+ D +K K
Sbjct: 58 TEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQK 104
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 31.2 bits (71), Expect = 0.51
Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 4/34 (11%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKT 243
K+G G +G+V + A+K
Sbjct: 39 FKVRKLGSGAYGEVLLCKEK----NGHSEKAIKV 68
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 31.1 bits (71), Expect = 0.52
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKT 243
EL E IG G F V R + R ++ AVK
Sbjct: 27 ELCEVIGKGPFSVVRRCINR----ETGQQFAVKI 56
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 31.2 bits (71), Expect = 0.56
Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 12/64 (18%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKT-CKGDTDPETAEKFLDEAS------- 261
+ +K+G G +G+V + + + A+K K + K L+E +
Sbjct: 40 QRVKKLGSGAYGEVLLCRDK----VTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95
Query: 262 PNVC 265
PN+
Sbjct: 96 PNIM 99
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding,
membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Length = 345
Score = 30.9 bits (70), Expect = 0.61
Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 4/35 (11%)
Query: 211 LGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCK 245
LG+KIG G FG ++ P A K
Sbjct: 41 LGKKIGSGGFGLIYLA----FPTNKPEKDARHVVK 71
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase,
CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo
sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A*
2wb8_A
Length = 336
Score = 30.6 bits (68), Expect = 0.63
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Query: 204 LNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVK 242
L +++ EKIG+G FG+V + + P VA+K
Sbjct: 17 LPTEKLQRCEKIGEGVFGEVFQTIADHTP------VAIK 49
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 30.8 bits (70), Expect = 0.64
Identities = 10/34 (29%), Positives = 13/34 (38%), Gaps = 4/34 (11%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKT 243
+ + IG G V R V R + AVK
Sbjct: 97 DPKDVIGRGVSSVVRRCVHR----ATGHEFAVKI 126
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 30.4 bits (69), Expect = 0.69
Identities = 19/83 (22%), Positives = 28/83 (33%), Gaps = 19/83 (22%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVK-TCKGDTDPETAEKFLDEA-------- 260
EKIG G+FG V + R D + A+K + K + L E
Sbjct: 14 HELEKIGSGEFGSVFKC--VKRLDGCI--YAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 261 SPNVCLPCCTGRYSESVLYGDSL 283
+V RY + D +
Sbjct: 70 HSHVV------RYFSAWAEDDHM 86
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 30.6 bits (70), Expect = 0.70
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 210 ELGEKIGDGQFGDVHRGV 227
E+GE++G GQF V +
Sbjct: 8 EMGEELGSGQFAIVRKCR 25
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 30.3 bits (69), Expect = 0.70
Identities = 15/50 (30%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDE 259
K+G G FGDVH R S + +KT D E+ E
Sbjct: 25 IFKRKLGSGAFGDVHLVEER----SSGLERVIKTINKDRSQVPMEQIEAE 70
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 30.3 bits (69), Expect = 0.81
Identities = 11/55 (20%), Positives = 22/55 (40%), Gaps = 9/55 (16%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKT-----CKGDTDPETAEKFLDE 259
++GE++G GQF V + + + + A K + + E+ E
Sbjct: 15 DIGEELGSGQFAIVKKCREK----STGLEYAAKFIKKRQSRASRRGVSREEIERE 65
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 30.4 bits (69), Expect = 0.84
Identities = 15/92 (16%), Positives = 26/92 (28%), Gaps = 12/92 (13%)
Query: 181 SQGDDHNGGSLLSSPAYNDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVA 240
G + + ++ E++G G F V R V + + + A
Sbjct: 3 HMASMTGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHK----TTGLEFA 58
Query: 241 VKT-CKGDTDPETAEKFLDEAS-------PNV 264
K +K EA PN+
Sbjct: 59 AKIINTKKLSARDFQKLEREARICRKLQHPNI 90
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 30.4 bits (69), Expect = 0.85
Identities = 16/80 (20%), Positives = 27/80 (33%), Gaps = 17/80 (21%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS-------P 262
E + +G G FG V + + D A+K + EK + E P
Sbjct: 8 EPIQCLGRGGFGVVFEA--KNKVDDCN--YAIKRIRLPNRELAREKVMREVKALAKLEHP 63
Query: 263 NVCLPCCTGRYSESVLYGDS 282
+ RY + L ++
Sbjct: 64 GIV------RYFNAWLEKNT 77
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 30.3 bits (69), Expect = 0.88
Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 9/55 (16%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKT-----CKGDTDPETAEKFLDE 259
+ GE++G GQF V + + + + A K K + E E
Sbjct: 14 DTGEELGSGQFAVVKKCREK----STGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 30.0 bits (68), Expect = 0.91
Identities = 17/78 (21%), Positives = 36/78 (46%), Gaps = 14/78 (17%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEK---FLDE-ASPNVC 265
++ EK+G+G +G V++ + + ++ VA+K ++D + K + + SP+V
Sbjct: 32 DVLEKLGEGSYGSVYKAIHK----ETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVV 87
Query: 266 LPCCTGRYSESVLYGDSL 283
+Y S L
Sbjct: 88 ------KYYGSYFKNTDL 99
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 30.0 bits (68), Expect = 0.92
Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 18/81 (22%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDE-------ASP 262
EKIG G G V+ + + VA++ P+ E ++E +P
Sbjct: 23 TRFEKIGQGASGTVYTAMDV----ATGQEVAIRQMNLQQQPKK-ELIINEILVMRENKNP 77
Query: 263 NVCLPCCTGRYSESVLYGDSL 283
N+ Y +S L GD L
Sbjct: 78 NIV------NYLDSYLVGDEL 92
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 30.2 bits (69), Expect = 0.92
Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 12/63 (19%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKT-CKGDTDPETAEKFLDEAS------- 261
++ E++G G F V R V + + + A K +K EA
Sbjct: 9 DVKEELGKGAFSVVRRCVHK----TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 262 PNV 264
PN+
Sbjct: 65 PNI 67
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 30.1 bits (68), Expect = 0.94
Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 19/83 (22%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAE--------KFLDE-A 260
+IG G FG V+ ++ VA+K + +FL +
Sbjct: 57 SDLREIGHGSFGAVYFARDV----RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112
Query: 261 SPNVCLPCCTGRYSESVLYGDSL 283
PN +Y L +
Sbjct: 113 HPNTI------QYRGCYLREHTA 129
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 30.3 bits (69), Expect = 0.97
Identities = 14/63 (22%), Positives = 20/63 (31%), Gaps = 12/63 (19%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKT-CKGDTDPETAEKFLDEAS------- 261
+L E++G G F V R V + A +K EA
Sbjct: 14 QLFEELGKGAFSVVRRCVKV----LAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 262 PNV 264
PN+
Sbjct: 70 PNI 72
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 30.6 bits (68), Expect = 1.00
Identities = 58/388 (14%), Positives = 108/388 (27%), Gaps = 117/388 (30%)
Query: 16 HKFLPKHIVDTSKPKTLRKTLQAHFKKIAQLSEKDCI----MKFF-------EILKS--- 61
F ++ LR+ L +L + + ++ S
Sbjct: 124 QVFAKYNVSRLQPYLKLRQALL-------ELRPAKNVLIDGVLGSGKTWVALDVCLSYKV 176
Query: 62 QYKFDQELFRCALGSGW------SIPVDLV---------IGPDVGISYVTNRAPEPLKIA 106
Q K D ++F W + P ++ I P+ S + + L+I
Sbjct: 177 QCKMDFKIF-------WLNLKNCNSPETVLEMLQKLLYQIDPN-WTSRSDHSSNIKLRIH 228
Query: 107 DFSKIESIQTIFTKPDGTEKALLQLR-VAGTPEV----------LIIT-CPSVSEAQSLA 154
++ + E LL L V + L+ T V++ S A
Sbjct: 229 SIQ--AELRRLLKSKPY-ENCLLVLLNVQ-NAKAWNAFNLSCKILLTTRFKQVTDFLSAA 284
Query: 155 H-----LVNGYCRLHNNDAKSLWSKK-GSRKQS---QGDDHN-------GGSLLSSPAYN 198
L + L ++ KSL K R Q + N S+ A
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATW 344
Query: 199 D--RNYELNR--SQIE-----LGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCK---G 246
D ++ ++ + IE L F + VF S ++
Sbjct: 345 DNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRL--SVFP----PSA-HIPTILLSLIWF 397
Query: 247 DTDPETAEKFLDEASPNVCLPCCTGRYSESVLYGDSLVAKTGAIASESNVEVEELERRLR 306
D +++ L+ SLV K ES + + + L+
Sbjct: 398 DVIKSDVMVVVNK------------------LHKYSLVEKQP---KESTISIPSIYLELK 436
Query: 307 QQQLESEEDSKWLAEE-EINLRFDRRNC 333
+ + + + I FD +
Sbjct: 437 VKLENEYALHRSIVDHYNIPKTFDSDDL 464
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 30.0 bits (68), Expect = 1.0
Identities = 19/81 (23%), Positives = 25/81 (30%), Gaps = 18/81 (22%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDE-------ASP 262
+ KIG+G G V + S VAVK E +E
Sbjct: 48 DSYVKIGEGSTGIVCLAREK----HSGRQVAVKMMDLRKQQRR-ELLFNEVVIMRDYQHF 102
Query: 263 NVCLPCCTGRYSESVLYGDSL 283
NV +S L G+ L
Sbjct: 103 NVV------EMYKSYLVGEEL 117
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 30.0 bits (68), Expect = 1.0
Identities = 11/55 (20%), Positives = 21/55 (38%), Gaps = 9/55 (16%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKT-----CKGDTDPETAEKFLDE 259
++GE++G GQF V + + + + A K + E+ E
Sbjct: 15 DIGEELGSGQFAIVKKCREK----STGLEYAAKFIKKRQSRASRRGVCREEIERE 65
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 29.8 bits (67), Expect = 1.1
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 4/34 (11%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKT 243
L IG G +G V + ++ A+K
Sbjct: 29 HLKGAIGQGSYGVVRVAIEN----QTRAIRAIKI 58
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 29.8 bits (67), Expect = 1.2
Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 211 LGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETA 253
G K+G G +G V++ + D A+K +G +A
Sbjct: 25 EGCKVGRGTYGHVYKAKRKDGKDDKD--YALKQIEGTGISMSA 65
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 29.9 bits (68), Expect = 1.2
Identities = 9/34 (26%), Positives = 13/34 (38%), Gaps = 4/34 (11%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKT 243
E E +G G V R + + + AVK
Sbjct: 20 EPKEILGRGVSSVVRRCIHK----PTCKEYAVKI 49
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 29.2 bits (66), Expect = 1.9
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKT 243
E+ E IG G + R + + + + AVK
Sbjct: 25 EVKEDIGVGSYSVCKRCIHK----ATNMEFAVKI 54
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 29.3 bits (66), Expect = 1.9
Identities = 11/70 (15%), Positives = 21/70 (30%), Gaps = 18/70 (25%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVK-------TCKGDTDPETAEKFLDEAS- 261
+ + +G G G+V R K+ VA++ + + A E
Sbjct: 138 IMSKTLGSGACGEVKLAFER----KTCKKVAIRIISKRKFAIGSAREADPALNVETEIEI 193
Query: 262 ------PNVC 265
P +
Sbjct: 194 LKKLNHPCII 203
>2p74_A Beta-lactamase CTX-M-9A; ultra-high resolution, acylation, ESBL,
hydrolase; HET: PO4; 0.88A {Escherichia coli} PDB:
3g2y_A* 4dds_A* 4ddy_A* 4de0_A* 4de1_A* 4de2_A* 4de3_A*
1ylj_A* 1yly_A* 1ym1_A* 1yms_A* 1ymx_A* 3g2z_A* 3g30_A*
3g31_A* 3g32_A* 3g34_A* 3g35_A* 1ylt_A* 1ylz_A* ...
Length = 263
Score = 29.2 bits (65), Expect = 2.0
Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 209 IELGEKIGDGQFGDVHR-GVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS 261
G+K G G +G + V P ++ + + + + E+ L A+
Sbjct: 204 WTAGDKTGSGDYGTTNDIAVIWP-QGRAPLVLVTYFTQPQQNAESRRDVLASAA 256
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 29.1 bits (66), Expect = 2.1
Identities = 8/33 (24%), Positives = 12/33 (36%), Gaps = 4/33 (12%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVK 242
E +G G F +V R + A+K
Sbjct: 12 IFMEVLGSGAFSEVFLVKQR----LTGKLFALK 40
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily.,
cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Length = 231
Score = 29.0 bits (64), Expect = 2.1
Identities = 15/88 (17%), Positives = 26/88 (29%), Gaps = 3/88 (3%)
Query: 117 IFTKPDGTEKALLQLRVAGTPEVLIITC-PSVSEAQSLAHLVNGYCRLHNN--DAKSLWS 173
+ GT +A +L V PE ++ + C N K W
Sbjct: 96 VRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWY 155
Query: 174 KKGSRKQSQGDDHNGGSLLSSPAYNDRN 201
+ G R + + + G + S
Sbjct: 156 RNGQRLEVPVEMNPEGYMTSRTVREASG 183
>3mol_A Heme acquisition protein hasap; hemophore, heme transport, H32A
mutation, holo protein, heme protein, transport protein;
HET: HEM; 1.20A {Pseudomonas aeruginosa} PDB: 3mom_A*
3mok_A 3ell_A
Length = 184
Score = 28.5 bits (63), Expect = 2.2
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 163 LHNNDAKSLWSKKGSRKQSQGDDHNGGSLLSSPAYNDRNYELNRSQIELGEKIGDGQFGD 222
L +N + +LW K S + GD GG+ SS Y + E++ S + L I G+ G
Sbjct: 77 LFSNPSHTLWGKLDS--IALGDTLTGGA--SSGGYALDSQEVSFSNLGLDSPIAQGRDGT 132
Query: 223 VHRGVF 228
VH+ V+
Sbjct: 133 VHKVVY 138
>1hwt_C Protein (heme activator protein); transcription factor, asymmetry,
GAL4, complex activator/DNA, gene regulation/DNA
complex; HET: DNA; 2.50A {Saccharomyces cerevisiae}
SCOP: g.38.1.1 h.1.3.1 PDB: 2hap_C* 1qp9_A* 1pyc_A
Length = 81
Score = 27.1 bits (60), Expect = 2.2
Identities = 9/50 (18%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Query: 264 VCLPCCTGRYSESVLYGDSLVAKTGAIASESNVEVEELERRLRQQQLESE 313
C C + Y + A+ + E+++L R++ LE
Sbjct: 26 HCQQCTKTGVAHLCHYMEQTWAEEAEKELLKDNELKKLRERVK--SLEKT 73
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A
{Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A*
2csn_A*
Length = 298
Score = 28.9 bits (65), Expect = 2.3
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 211 LGEKIGDGQFGDVHRGV 227
+G +IG+G FG + G
Sbjct: 14 VGRRIGEGSFGVIFEGT 30
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 28.8 bits (65), Expect = 2.5
Identities = 12/69 (17%), Positives = 21/69 (30%), Gaps = 18/69 (26%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVK-------TCKGDTDPETAEKFLDEAS- 261
+ + +G G G+V R K+ VA+K + + A E
Sbjct: 13 IMSKTLGSGACGEVKLAFER----KTCKKVAIKIISKRKFAIGSAREADPALNVETEIEI 68
Query: 262 ------PNV 264
P +
Sbjct: 69 LKKLNHPCI 77
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 28.8 bits (65), Expect = 2.5
Identities = 6/73 (8%), Positives = 22/73 (30%), Gaps = 6/73 (8%)
Query: 164 HNNDAKSLWSKKGSRKQSQGDDHNGGSLLSSPAYNDRNYELNRSQI------ELGEKIGD 217
H++ + + + + + + + ++ E+ ++G
Sbjct: 4 HHHHSSGVDLGTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGR 63
Query: 218 GQFGDVHRGVFRP 230
G V+R +
Sbjct: 64 GATSIVYRCKQKG 76
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor,
PF670462, transferase-transferase I complex; HET: 0CK;
1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Length = 296
Score = 28.5 bits (64), Expect = 2.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 211 LGEKIGDGQFGDVHRGV 227
LG KIG G FGD++ G
Sbjct: 13 LGRKIGSGSFGDIYLGT 29
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol,
transferase; 2.00A {Oryza sativa japonica group}
Length = 483
Score = 28.8 bits (64), Expect = 2.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 211 LGEKIGDGQFGDVHRGV 227
LG KIG G FG+++ G
Sbjct: 11 LGRKIGSGSFGEIYLGT 27
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp
contractIle protein-transport protein complex; 24.00A
{Gallus gallus}
Length = 1080
Score = 28.9 bits (65), Expect = 2.9
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 281 DSLVAKTGAIASESNVEVEELERRLRQQQLESEEDSKW-LAEEEINLRFDRRN 332
+ LV++ + E EEL RR+ Q E E + L EE L D +
Sbjct: 1022 EQLVSELKEQNTLLKTEKEELNRRIHDQAKEITETMEKKLVEETKQLELDLND 1074
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 28.3 bits (64), Expect = 2.9
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 4/34 (11%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKT 243
L IG G +G+V V + + I A K
Sbjct: 12 TLENTIGRGSWGEVKIAVQK----GTRIRRAAKK 41
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 28.4 bits (64), Expect = 3.2
Identities = 6/34 (17%), Positives = 13/34 (38%), Gaps = 4/34 (11%)
Query: 210 ELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKT 243
+ +G G G V + + ++ A+K
Sbjct: 21 VTSQVLGLGINGKVLQIFNK----RTQEKFALKM 50
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 28.4 bits (64), Expect = 3.3
Identities = 7/35 (20%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 193 SSPAYNDRNYELNRSQIELGEKIGDGQFGDVHRGV 227
+ +YE + + +G G +G V+ G
Sbjct: 10 CESDLLEYDYEYDENG--DRVVLGKGTYGIVYAGR 42
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino
acid sequence, binding sites, domain, models, molecular;
HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Length = 364
Score = 28.6 bits (64), Expect = 3.4
Identities = 10/41 (24%), Positives = 13/41 (31%), Gaps = 1/41 (2%)
Query: 211 LGEKIGDGQFGDVHRGVFRPRPDKSV-INVAVKTCKGDTDP 250
+G IG G FG ++ VK D P
Sbjct: 39 VGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGP 79
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3;
transferase, pseudo kinase domain, vaccinia related
kinase, ATP-binding; 2.00A {Homo sapiens}
Length = 352
Score = 28.2 bits (63), Expect = 4.1
Identities = 3/36 (8%), Positives = 7/36 (19%), Gaps = 4/36 (11%)
Query: 211 LGEKIGDGQFGDVHRGV----FRPRPDKSVINVAVK 242
L G ++ ++K
Sbjct: 46 LKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLK 81
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK,
transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB:
2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Length = 307
Score = 27.9 bits (63), Expect = 4.4
Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 6/46 (13%)
Query: 206 RSQIELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPE 251
R G K+G+G FG V++G VAVK D
Sbjct: 30 RPISVGGNKMGEGGFGVVYKGYVNNTT------VAVKKLAAMVDIT 69
>3qe9_Y Exonuclease 1; exonuclease, hydrolase-DNA complex; HET: DNA; 2.51A
{Homo sapiens} PDB: 3qeb_Z* 3qea_Z*
Length = 352
Score = 28.0 bits (62), Expect = 5.1
Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Query: 230 PRPDKSVINVAVKTCKGDTDPETAEKFLDEASPNVCLP 267
D S+ A++ G+ D T E+ D+ +P+ +P
Sbjct: 315 QYVDDSI---ALQIALGNKDINTFEQI-DDYNPDTAMP 348
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 27.2 bits (59), Expect = 5.1
Identities = 7/33 (21%), Positives = 16/33 (48%), Gaps = 7/33 (21%)
Query: 293 ESNVEVEELERRLRQQQLESEEDSKWLAEEEIN 325
E +++L+ L+ L +++ + LA I
Sbjct: 18 EKQ-ALKKLQASLK---LYADDSAPALA---IK 43
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase,
transferase, ATP- binding, phosphorylation,
nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB:
2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Length = 330
Score = 27.7 bits (62), Expect = 5.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 210 ELGEKIGDGQFGDVHRGV 227
+G+KIG G FG++ G
Sbjct: 12 RVGKKIGCGNFGELRLGK 29
>1g6a_A Beta-lactamase PSE-4; class A beta-lactamase, carbenicillinase,
R234K mutant, hydrolase; 1.75A {Pseudomonas aeruginosa}
SCOP: e.3.1.1 PDB: 1g68_A
Length = 271
Score = 27.6 bits (61), Expect = 5.3
Identities = 9/54 (16%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Query: 209 IELGEKIGDGQFGDVHR-GVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS 261
+ +K G G FG V ++ I V++ + E + +
Sbjct: 207 WNIADKSGAGGFGARSITAVVWS-EHQAPIIVSIYLAQTQASMEERNDAIVKIG 259
>1m40_A TEM-1, beta-lactamase TEM; acylation mechanism, ultra- high
resolution, hydrolase; HET: CB4; 0.85A {Escherichia
coli} SCOP: e.3.1.1 PDB: 1jwp_A* 1nxy_A* 1ny0_A* 1nym_A*
1nyy_A* 1pzo_A* 1erm_A* 1ero_A* 1erq_A* 1s0w_A 1xpb_A
1li0_A 1htz_A 1jtd_A 1esu_A 1jwz_A* 1li9_A 1jwv_A*
1jtg_A 1axb_A* ...
Length = 263
Score = 27.6 bits (61), Expect = 5.8
Identities = 8/53 (15%), Positives = 15/53 (28%)
Query: 209 IELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS 261
+ +K G G+ G K V + T + + + E
Sbjct: 204 WFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 256
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization,
acetylation, ATP-binding, nucleotide-binding,
phosphoprotein, transferase; 1.80A {Saccharomyces
cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A
2zzy_A
Length = 186
Score = 27.1 bits (61), Expect = 6.1
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 298 VEELERRLRQQQLESEE 314
VE+L++RL + E+EE
Sbjct: 125 VEDLKKRLEGRGTETEE 141
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin
domain, microsome, protein disulfide isomerase,
thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo
sapiens}
Length = 401
Score = 27.7 bits (60), Expect = 6.7
Identities = 15/99 (15%), Positives = 33/99 (33%), Gaps = 8/99 (8%)
Query: 118 FTKPDGTEKALLQLRVAGTPEVLIITCPSVSEAQSLAHLVNGYCRLHN----NDAKSLWS 173
P + L+L V P+V + +++ A C + + + W
Sbjct: 273 IHLPYLQGQVTLELAVYKPPKVS-LMPATLARAAPGEAPPELLCLVSHFYPSGGLEVEWE 331
Query: 174 KKGSRKQSQGDDHNGGSLLSSPAYN-DRNYELNRSQIEL 211
+G + G LS+ ++ D + L ++
Sbjct: 332 LRG-GPGGRSQKAEGQRWLSALRHHSDGSVSL-SGHLQP 368
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex,
layered beta- sheets, transferas; HET: SEP TPO; 3.20A
{Solanum pimpinellifolium} PDB: 3hgk_A*
Length = 321
Score = 27.6 bits (62), Expect = 6.9
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 5/29 (17%)
Query: 214 KIGDGQFGDVHRGVFRPRPDKSVINVAVK 242
IG G FG V++GV D + VA+K
Sbjct: 46 LIGHGVFGKVYKGVL---RDGAK--VALK 69
>1n9b_A Penicillinase, beta-lactamase SHV-2; beta-lactam hydrolase,
detergent binding, drug design, radiation damage; HET:
MA4 EPE; 0.90A {Klebsiella pneumoniae} SCOP: e.3.1.1
PDB: 3d4f_A* 2zd8_A* 1q2p_A* 1shv_A* 1vm1_A* 2g2u_A
2h5s_A* 1ong_A* 3c4o_A 3c4p_A 3mke_A* 3mkf_A* 3mxr_A*
3mxs_A* 3n4i_A 2a3u_A* 3opr_A* 3opl_A* 3oph_A* 3opp_A*
...
Length = 265
Score = 27.2 bits (60), Expect = 7.4
Identities = 5/53 (9%), Positives = 13/53 (24%)
Query: 209 IELGEKIGDGQFGDVHRGVFRPRPDKSVINVAVKTCKGDTDPETAEKFLDEAS 261
+ +K G + G +K+ V + + +
Sbjct: 204 WFIADKTGASERGARGIVALLGPNNKAERIVVIYLRDTPASMAERNQQIAGIG 256
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 27.4 bits (61), Expect = 7.9
Identities = 10/71 (14%), Positives = 20/71 (28%), Gaps = 10/71 (14%)
Query: 173 SKKGSRKQSQGDDHNGGSLLSSPAYNDRNYELNRSQIELGEKIGDGQFGDVHRGVFRPRP 232
Q H L +Y++ + +G G G V + +
Sbjct: 34 QPPPPPPQQFPQFHVKSGLQIKKNAIIDDYKV------TSQVLGLGINGKVLQIFNK--- 84
Query: 233 DKSVINVAVKT 243
++ A+K
Sbjct: 85 -RTQEKFALKM 94
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.317 0.135 0.397
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 4,992,552
Number of extensions: 290080
Number of successful extensions: 1108
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1043
Number of HSP's successfully gapped: 194
Length of query: 335
Length of database: 6,701,793
Length adjustment: 94
Effective length of query: 241
Effective length of database: 4,077,219
Effective search space: 982609779
Effective search space used: 982609779
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (25.9 bits)