RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11287
(112 letters)
>d1z7kb1 g.68.1.1 (B:2-63) Ovomucoid domains {Turkey (Meleagris
gallopavo) [TaxId: 9103]}
Length = 62
Score = 57.3 bits (138), Expect = 4e-13
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 28 CRNDGHCVVKNGKAVCKCPSCSAEYNPVCGSDGISYENECKLNLEACQHSRQISVLYIGL 87
C + + GK + C NPVCG+DG++Y+NEC L + + + G
Sbjct: 5 CSRYPNTTSEEGKVMILCNK---ALNPVCGTDGVTYDNECVLCAHNLEQGTSVGKKHDGE 61
Query: 88 C 88
C
Sbjct: 62 C 62
>d1hpta_ g.68.1.1 (A:) Secretory trypsin inhibitor {Human (Homo
sapiens) [TaxId: 9606]}
Length = 56
Score = 56.1 bits (135), Expect = 1e-12
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 37 KNGKAVCKCPSCSAEYNPVCGSDGISYENECKLNLEACQHSRQISVLYIGLC 88
+ K + C+ EY PVCG+DG +Y NEC L E + I + G C
Sbjct: 5 REAKCYNELNGCTYEYRPVCGTDGDTYPNECVLCFENRKRQTSILIQKSGPC 56
>d1pcea_ g.68.1.1 (A:) PEC-60 peptide {Pig (Sus scrofa) [TaxId:
9823]}
Length = 60
Score = 55.7 bits (134), Expect = 2e-12
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 43 CKCPSCSAEYNPVCGSDGISYENECKLNLEACQHSRQISVLYIGLC 88
+ P CS Y+PVCG+DG++YE+ECKL L ++ + I ++ G C
Sbjct: 15 TESPDCSRIYDPVCGTDGVTYESECKLCLARIENKQDIQIVKDGEC 60
>d1tgsi_ g.68.1.1 (I:) Secretory trypsin inhibitor {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 56
Score = 55.0 bits (132), Expect = 2e-12
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 37 KNGKAVCKCPSCSAEYNPVCGSDGISYENECKLNLEACQHSRQISVLYIGLC 88
+ + C YNPVCG+DGI+Y NEC L E + + + G C
Sbjct: 5 REATCTSEVSGCPKIYNPVCGTDGITYSNECVLCSENKKRQTPVLIQKSGPC 56
>d1r0ri_ g.68.1.1 (I:) Ovomucoid domains {Turkey (Meleagris
gallopavo) [TaxId: 9103]}
Length = 51
Score = 52.6 bits (126), Expect = 2e-11
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 43 CKCPSCSAEYNPVCGSDGISYENECKLNLEACQHSRQISVLYIGLC 88
P+C+ EY P+CGSD +Y N+C + + +++ + G C
Sbjct: 6 YPKPACTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
>d1tbrr2 g.68.1.1 (R:52-103) Blood-sucking insect-derived tryptase
inhibitor {Bug (Rhodnius prolixus), rhodniin [TaxId:
13249]}
Length = 52
Score = 51.0 bits (122), Expect = 8e-11
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 43 CKCP-SCSAEYNPVCGSDGISYENECKLNLEACQHSRQISVLYIGLC 88
C EY PVCGSD I+Y+N C+L + S + + + G C
Sbjct: 4 DVCQECDGDEYKPVCGSDDITYDNNCRLECASISSSPGVELKHEGPC 50
>d2busa_ g.68.1.1 (A:) Seminal plasma inhibitor IIa {Cow (Bos
taurus) [TaxId: 9913]}
Length = 57
Score = 50.7 bits (121), Expect = 1e-10
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 46 PSCSAEYNPVCGSDGISYENECKLNLEACQHSRQISVLYIGLC 88
C+ E NP CGS+G +Y N+C + +I++ + G C
Sbjct: 15 VYCTRESNPHCGSNGETYGNKCAFCKAVMKSGGKINLKHRGKC 57
>d2erwa1 g.68.1.1 (A:4-56) Blood-sucking insect-derived tryptase
inhibitor {Triatoma infestans [TaxId: 30076]}
Length = 53
Score = 49.1 bits (117), Expect = 5e-10
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 47 SCSAEYNPVCGSDGISYENECKLNLEACQHSRQISVLYIGLCSK 90
+C Y PVCGSDG +Y N C LN A + +++ G C +
Sbjct: 4 ACFRNYVPVCGSDGKTYGNPCMLNCAAQTKVPGLKLVHEGRCQR 47
>d2f3ci1 g.68.1.1 (I:5-50) Blood-sucking insect-derived tryptase
inhibitor {Triatoma infestans [TaxId: 30076]}
Length = 46
Score = 47.5 bits (113), Expect = 2e-09
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 47 SCSAEYNPVCGSDGISYENECKLNLEACQHSRQISVLYIGLC 88
+C + VCGSDG +Y N C L+ + + ++ G C
Sbjct: 3 ACPRVLHRVCGSDGNTYSNPCTLDCAKHEGKPDLVQVHEGPC 44
>d1lr7a2 g.68.1.1 (A:89-136) Domain of follistatin {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 48
Score = 47.6 bits (113), Expect = 2e-09
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 47 SCSAEYNPVCGSDGISYENECKLNLEACQHSRQISVLYIGLC 88
S PVCG DG +Y NEC L C+ ++ V Y G C
Sbjct: 6 SNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKC 47
>d1nuba3 g.68.1.1 (A:78-135) Domain of BM-40/SPARC/osteonectin
{Human (Homo sapiens) [TaxId: 9606]}
Length = 58
Score = 45.3 bits (107), Expect = 1e-08
Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 5/50 (10%)
Query: 44 KCPSCSAEYNPVCGSDGISYENECKLNLEACQHS-----RQISVLYIGLC 88
CP+ E+ VC +D ++++ C C ++ + YIG C
Sbjct: 6 SCPAPIGEFEKVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPC 55
>d1h0za_ g.68.1.2 (A:) Serine proteinase inhibitor lekti {Human
(Homo sapiens) [TaxId: 9606]}
Length = 68
Score = 44.5 bits (105), Expect = 4e-08
Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
Query: 36 VKNGKAVCKCPSCSAEYNPVCGSDGISYENECKLNLEACQHSRQISVLYIGLCS 89
V+NGK +C+ E +P+ G DG + N C + Q + G
Sbjct: 19 VRNGKL-----ACTRENDPIQGPDGKVHGNTCSMCEVFFQAEEEEKKKKEGESR 67
>d1hdla_ g.68.1.2 (A:) Serine proteinase inhibitor lekti {Human
(Homo sapiens) [TaxId: 9606]}
Length = 55
Score = 35.9 bits (83), Expect = 6e-05
Identities = 10/32 (31%), Positives = 14/32 (43%), Gaps = 5/32 (15%)
Query: 36 VKNGKAVCKCPSCSAEYNPVCGSDGISYENEC 67
+KNGK C + DGI + N+C
Sbjct: 15 MKNGKL-----FCPQDKKFFQSLDGIMFINKC 41
>d1ldtl_ g.68.1.1 (L:) Leech derived tryptase inhibitor (LDTI-C)
{Medicinal leech (Hirudo medicinalis) [TaxId: 6421]}
Length = 46
Score = 33.6 bits (77), Expect = 4e-04
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
Query: 47 SCSAEYNPVCGSDGISYENECKLNLEACQHSRQISVLYIGLCSKGLL 93
+C PVCGSDG +Y N C +S+ G C G+L
Sbjct: 5 ACPKILKPVCGSDGRTYANSCIAR------CNGVSIKSEGSCPTGIL 45
>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 32.4 bits (74), Expect = 8e-04
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 20 TGPCSSNPCRNDGHCVVKNGKAVCKCP 46
T C++ C G CV CKC
Sbjct: 1 TAACTNTSCSGHGECVETINNYTCKCD 27
>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 40
Score = 31.7 bits (72), Expect = 0.002
Identities = 8/27 (29%), Positives = 9/27 (33%)
Query: 20 TGPCSSNPCRNDGHCVVKNGKAVCKCP 46
T C C G C+ G C C
Sbjct: 1 TASCQDMSCSKQGECLETIGNYTCSCY 27
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 39
Score = 31.6 bits (72), Expect = 0.002
Identities = 11/26 (42%), Positives = 11/26 (42%)
Query: 22 PCSSNPCRNDGHCVVKNGKAVCKCPS 47
C SNPC N G C C CP
Sbjct: 5 QCESNPCLNGGSCKDDINSYECWCPF 30
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog
protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 31.2 bits (71), Expect = 0.002
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 22 PCSSNPCRNDGHCVVKNGKAVCKCPS 47
C SNPC+ND C+ + G+ C C
Sbjct: 3 ECVSNPCQNDATCLDQIGEFQCICMP 28
>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 37
Score = 30.4 bits (69), Expect = 0.005
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 22 PCSSNPCRNDGHCVVKNGKAVCKCPS 47
C+S+PC+N G C + +C C
Sbjct: 4 QCASSPCQNGGSCKDQLQSYICFCLP 29
>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human
(Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 30.4 bits (69), Expect = 0.006
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 22 PCSSNPCRNDGHCVVKNGKAVCKCPS 47
C ++PC+N G C G+ C C
Sbjct: 2 QCETSPCQNQGKCKDGLGEYTCTCLE 27
>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog
protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 35
Score = 30.0 bits (68), Expect = 0.007
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 22 PCSSNPCRNDGHCVVKNGKAVCKCPS 47
C+S+PC ++G C+ K + C+CP+
Sbjct: 2 ECASSPCLHNGRCLDKINEFQCECPT 27
>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like
module {Mouse (Mus musculus) [TaxId: 10090]}
Length = 41
Score = 29.0 bits (65), Expect = 0.021
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 22 PCSSNPCRNDGHCVV-KNGKAVCKCP 46
PC SNPC+N G C+ + C C
Sbjct: 3 PCCSNPCQNRGECMSTGFDQYKCDCT 28
>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin
IIa) {Human (Homo sapiens) [TaxId: 9606]}
Length = 48
Score = 29.0 bits (65), Expect = 0.025
Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Query: 22 PCSSNPCRNDGHCVVKNGKAVCKCPS 47
PC+S C + G C+ G C C S
Sbjct: 10 PCASLCCGH-GTCIDGIGSFSCDCRS 34
>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type),
t-PA {Human (Homo sapiens) [TaxId: 9606]}
Length = 41
Score = 28.7 bits (64), Expect = 0.027
Identities = 9/37 (24%), Positives = 10/37 (27%)
Query: 23 CSSNPCRNDGHCVVKNGKAVCKCPSCSAEYNPVCGSD 59
CS C N G C + C C D
Sbjct: 1 CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEID 37
>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like
module {Sheep (Ovis aries) [TaxId: 9940]}
Length = 42
Score = 27.9 bits (62), Expect = 0.051
Identities = 9/26 (34%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 22 PCSSNPCRNDGHCVVKN-GKAVCKCP 46
PC PC++ G CV + C C
Sbjct: 4 PCCYYPCQHQGICVRFGLDRYQCDCT 29
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog
protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 42
Score = 27.8 bits (62), Expect = 0.055
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 23 CSSNPCRNDGHCVVKNGKAVCKCPS 47
+NPC + G C+ G C+C
Sbjct: 8 LGANPCEHAGKCINTLGSFECQCLQ 32
>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 53
Score = 27.9 bits (62), Expect = 0.067
Identities = 6/31 (19%), Positives = 7/31 (22%), Gaps = 2/31 (6%)
Query: 19 ETGPCSSNPCRNDGHCVVKNGKA--VCKCPS 47
C N G C+ C C
Sbjct: 5 GCPSSYDGYCLNGGVCMHIESLDSYTCNCVI 35
>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo
sapiens) [TaxId: 9606]}
Length = 48
Score = 27.5 bits (61), Expect = 0.076
Identities = 6/27 (22%), Positives = 8/27 (29%)
Query: 19 ETGPCSSNPCRNDGHCVVKNGKAVCKC 45
E C +DG C+ C
Sbjct: 3 ECPLSHDGYCLHDGVCMYIEALDKYAC 29
>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 22.8 bits (49), Expect = 3.6
Identities = 7/25 (28%), Positives = 10/25 (40%)
Query: 23 CSSNPCRNDGHCVVKNGKAVCKCPS 47
C G C+ +G C+CP
Sbjct: 8 CKEPDVCKHGQCINTDGSYRCECPF 32
>d1p35a_ b.28.1.1 (A:) Baculovirus p35 protein {AcMNPV (Autographa
californica nuclear polyhedrosis virus) [TaxId: 46015]}
Length = 299
Score = 24.5 bits (53), Expect = 3.7
Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
Query: 29 RNDGH---CVVKNGKAVCKCPSCSAEYNPVCG 57
RND + CV+K G S EYNP+
Sbjct: 144 RNDYYVAVCVLKPGFENGSNQVLSFEYNPIGN 175
>d2fiya1 e.59.1.1 (A:19-308) FdhE homolog PA4809 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 290
Score = 24.5 bits (53), Expect = 3.8
Identities = 11/77 (14%), Positives = 19/77 (24%), Gaps = 23/77 (29%)
Query: 5 LASRFQFDSVGYLGETGPCSSNPC----------RNDGHCVVKNGKAVCKCPSCSAEYN- 53
+ +V C P R G + G C C+ E++
Sbjct: 149 WLLGLEEGAVVETESRTLC---PACGSPPMAGMIRQGGK---ETGLRYLSCSLCACEWHY 202
Query: 54 -----PVCGS-DGISYE 64
C ++Y
Sbjct: 203 VRIKCSHCEESKHLAYL 219
>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 63
Score = 23.0 bits (49), Expect = 4.2
Identities = 7/31 (22%), Positives = 10/31 (32%), Gaps = 5/31 (16%)
Query: 22 PCSSNPCRNDGHCVVKN-----GKAVCKCPS 47
C N G C + + +CKC
Sbjct: 8 EKEKTFCVNGGECFMVKDLSNPSRYLCKCQP 38
>d1y0ua_ a.4.5.5 (A:) Putative arsenical resistance operon repressor
AF0168 {Archaeoglobus fulgidus [TaxId: 2234]}
Length = 89
Score = 23.4 bits (50), Expect = 5.1
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 76 HSRQISVLYIGLCSKGLLREIDKARQENEI 105
H R + + + +LR +DK R E EI
Sbjct: 21 HKRYNYAVTNPV-RRKILRMLDKGRSEEEI 49
>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 50
Score = 22.1 bits (47), Expect = 7.5
Identities = 5/34 (14%), Positives = 7/34 (20%), Gaps = 1/34 (2%)
Query: 15 GYLGETGPCSSNPCRNDGHCVVKN-GKAVCKCPS 47
G+ + C V C C
Sbjct: 3 GHFSRCPKQYKHYCIKGRCRFVVAEQTPSCVCDE 36
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.136 0.429
Gapped
Lambda K H
0.267 0.0607 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 420,541
Number of extensions: 18851
Number of successful extensions: 113
Number of sequences better than 10.0: 1
Number of HSP's gapped: 110
Number of HSP's successfully gapped: 68
Length of query: 112
Length of database: 2,407,596
Length adjustment: 71
Effective length of query: 41
Effective length of database: 1,432,766
Effective search space: 58743406
Effective search space used: 58743406
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.1 bits)