RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11289
(159 letters)
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 108 bits (271), Expect = 3e-31
Identities = 48/143 (33%), Positives = 72/143 (50%), Gaps = 2/143 (1%)
Query: 3 IESYFVTDYDPTIEDSY-TKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVF 61
E F + + TI + + +D +L I DTAGQE F + Y R G +LV+
Sbjct: 27 SEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVY 86
Query: 62 SVTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPY 121
+T+ SF+ I + R I D M+ +GNK D++ +RQVS + +A I +
Sbjct: 87 DITNEKSFDNIRNWIRNIEEHASADVEKMI-LGNKCDVNDKRQVSKERGEKLALDYGIKF 145
Query: 122 IECSAKVRINVDQAFHELVRIVL 144
+E SAK INV+ AF L R +
Sbjct: 146 METSAKANINVENAFFTLARDIK 168
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 104 bits (261), Expect = 7e-30
Identities = 47/143 (32%), Positives = 77/143 (53%), Gaps = 3/143 (2%)
Query: 3 IESYFVTDYDPTIEDSYTKQCV-IDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVF 61
+E F + TI + + V I+ +L I DTAGQE F + Y R G +LV+
Sbjct: 23 VEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQERFRTITTAYYRGAMGIILVY 82
Query: 62 SVTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPY 121
+TD +F I ++ + + DE +L+VGNK+D R V++ + +A++L IP+
Sbjct: 83 DITDERTFTNIKQWFKTV-NEHANDEAQLLLVGNKSD-METRVVTADQGEALAKELGIPF 140
Query: 122 IECSAKVRINVDQAFHELVRIVL 144
IE SAK NV++ F L +++
Sbjct: 141 IESSAKNDDNVNEIFFTLAKLIQ 163
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 99.9 bits (248), Expect = 6e-28
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 2/147 (1%)
Query: 3 IESYFVTDYDPTI-EDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVF 61
+ F TI D K I+ +L I DTAGQE F ++ + Y RS +L +
Sbjct: 26 TQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTY 85
Query: 62 SVTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPY 121
+T SF + ++ R+I + ++VGNK DL +R+VS A+ + + Y
Sbjct: 86 DITCEESFRCLPEWLREIEQYASNK-VITVLVGNKIDLAERREVSQQRAEEFSEAQDMYY 144
Query: 122 IECSAKVRINVDQAFHELVRIVLLHTK 148
+E SAK NV++ F +L ++ +
Sbjct: 145 LETSAKESDNVEKLFLDLACRLISEAR 171
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 99.6 bits (247), Expect = 1e-27
Identities = 44/159 (27%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 3 IESYFVTDYDPTIEDSYTKQCVI-----------DDIPARLDILDTAGQEEFSAMREQYM 51
++ F + T+ + ++ V+ L + DTAGQE F ++ +
Sbjct: 26 TDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFF 85
Query: 52 RSGEGFLLVFSVTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQ 111
R GFLL+F +T + SF + + Q+ + ++++GNKADL QR+V+ A+
Sbjct: 86 RDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREVNERQAR 145
Query: 112 NVARQLRIPYIECSAKVRINVDQAFHELVRIVLLHTKQC 150
+A + IPY E SA NV++A L+ +++ +QC
Sbjct: 146 ELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQC 184
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 98.4 bits (244), Expect = 3e-27
Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 2/143 (1%)
Query: 3 IESYFVTDYDPTIE-DSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVF 61
+ F + TI D K +D A+L I DTAGQE F + Y R +G +LV+
Sbjct: 28 TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVY 87
Query: 62 SVTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPY 121
VT R++F ++ + ++ R++ ++VGNK D R+V + AR+ + +
Sbjct: 88 DVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID-KENREVDRNEGLKFARKHSMLF 146
Query: 122 IECSAKVRINVDQAFHELVRIVL 144
IE SAK V AF ELV ++
Sbjct: 147 IEASAKTCDGVQCAFEELVEKII 169
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 93.4 bits (231), Expect = 2e-25
Identities = 61/139 (43%), Positives = 100/139 (71%)
Query: 3 IESYFVTDYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFS 62
+ F+ YDPTIED Y K+ +D P+ L+ILDTAG E+F++MR+ Y+++G+GF+LV+S
Sbjct: 24 VTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYS 83
Query: 63 VTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPYI 122
+ ++ SF++I QI+RVK ++ P+++VGNK DL+ +R+VSS + + +A + P++
Sbjct: 84 LVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSSEGRALAEEWGCPFM 143
Query: 123 ECSAKVRINVDQAFHELVR 141
E SAK + VD+ F E+VR
Sbjct: 144 ETSAKSKTMVDELFAEIVR 162
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 93.0 bits (230), Expect = 3e-25
Identities = 38/143 (26%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Query: 3 IESYFVTDYDPTIEDSYTKQCV-IDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVF 61
+ F + TI + + + +D + I DTAGQE + + Y R G LLV+
Sbjct: 25 TRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRRITSAYYRGAVGALLVY 84
Query: 62 SVTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPY 121
+ ++E + ++ +++ D + +++VGNK+DL H R V + +A+ A + + +
Sbjct: 85 DIAKHLTYENVERWLKELRDHADSN-IVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSF 143
Query: 122 IECSAKVRINVDQAFHELVRIVL 144
IE SA NV++AF ++ +
Sbjct: 144 IETSALDSTNVEEAFKNILTEIY 166
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 92.8 bits (229), Expect = 4e-25
Identities = 95/147 (64%), Positives = 115/147 (78%)
Query: 3 IESYFVTDYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFS 62
I+SYFV+DYDPTIEDSYTK C +D IPARLDILDTAGQEEF AMREQYMR+G GFLLVF+
Sbjct: 27 IQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAGHGFLLVFA 86
Query: 63 VTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPYI 122
+ DR SF E+ K QILRVKDRD+FP+++VGNKADL+ QRQV +A + Y
Sbjct: 87 INDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLESQRQVPRSEASAFGASHHVAYF 146
Query: 123 ECSAKVRINVDQAFHELVRIVLLHTKQ 149
E SAK+R+NVD+AF +LVR V + +Q
Sbjct: 147 EASAKLRLNVDEAFEQLVRAVRKYQEQ 173
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 92.6 bits (229), Expect = 4e-25
Identities = 42/139 (30%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 4 ESYFVTDYDPTIEDSYTKQCV-IDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFS 62
++ + T+ + + + +D + +L + DTAGQE F ++ Y R LL++
Sbjct: 29 GAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYD 88
Query: 63 VTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPYI 122
VT++ SF+ I + +I D ML +GNK D H+R V D + +A++ +P++
Sbjct: 89 VTNKASFDNIQAWLTEIHEYAQHDVALML-LGNKVDSAHERVVKREDGEKLAKEYGLPFM 147
Query: 123 ECSAKVRINVDQAFHELVR 141
E SAK +NVD AF + +
Sbjct: 148 ETSAKTGLNVDLAFTAIAK 166
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 92.2 bits (228), Expect = 6e-25
Identities = 42/142 (29%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Query: 3 IESYFVTDYDPTIEDSYTKQCV-IDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVF 61
E F+ D TI + + + + +L I DTAGQE F A+ Y R G L+V+
Sbjct: 25 TEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVY 84
Query: 62 SVTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPY 121
+T R+++ + + + + + ++++GNKADL+ QR V+ +A+ A + + +
Sbjct: 85 DITRRSTYNHLSSWLTDARNLTNPN-TVIILIGNKADLEAQRDVTYEEAKQFAEENGLLF 143
Query: 122 IECSAKVRINVDQAFHELVRIV 143
+E SAK NV+ AF E + +
Sbjct: 144 LEASAKTGENVEDAFLEAAKKI 165
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 92.3 bits (228), Expect = 6e-25
Identities = 72/142 (50%), Positives = 99/142 (69%)
Query: 3 IESYFVTDYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFS 62
+ FV DY+PT DSY K+ V+D ++DILDTAGQE+++A+R+ Y RSGEGFL VFS
Sbjct: 25 MYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFS 84
Query: 63 VTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPYI 122
+T+ SF F QILRVK+ + P L+VGNK+DL+ +RQVS +A+N A Q + Y+
Sbjct: 85 ITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDKRQVSVEEAKNRADQWNVNYV 144
Query: 123 ECSAKVRINVDQAFHELVRIVL 144
E SAK R NVD+ F +L+R +
Sbjct: 145 ETSAKTRANVDKVFFDLMREIR 166
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 92.6 bits (229), Expect = 8e-25
Identities = 47/148 (31%), Positives = 71/148 (47%), Gaps = 2/148 (1%)
Query: 3 IESYFVTDYDPTIEDSY-TKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVF 61
+ + DY TI + K +D +L I DTAGQE F + Y R G ++V+
Sbjct: 27 SDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVY 86
Query: 62 SVTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPY 121
VTD+ SF + + ++I R L+VGNK DL +R V A+ A ++P+
Sbjct: 87 DVTDQESFNGVKMWLQEIDR-YATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPF 145
Query: 122 IECSAKVRINVDQAFHELVRIVLLHTKQ 149
+E SA NV+ AF + R + Q
Sbjct: 146 LETSALDSTNVEDAFLTMARQIKESMSQ 173
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 91.3 bits (225), Expect = 1e-24
Identities = 115/142 (80%), Positives = 130/142 (91%)
Query: 3 IESYFVTDYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFS 62
I+SYFVTDYDPTIEDSYTKQCVIDD ARLDILDTAGQEEF AMREQYMR+GEGFLLVFS
Sbjct: 26 IQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTGEGFLLVFS 85
Query: 63 VTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPYI 122
VTDR SFEEIYKF RQILRVKDRDEFPM+++GNKADLDHQRQV+ + Q +ARQL++ Y+
Sbjct: 86 VTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADLDHQRQVTQEEGQQLARQLKVTYM 145
Query: 123 ECSAKVRINVDQAFHELVRIVL 144
E SAK+R+NVDQAFHELVR++
Sbjct: 146 EASAKIRMNVDQAFHELVRVIR 167
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 90.0 bits (222), Expect = 3e-24
Identities = 84/144 (58%), Positives = 106/144 (73%), Gaps = 1/144 (0%)
Query: 3 IESYFVTDYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFS 62
I+++FV +YDPTIEDSY KQ VID LDILDTAGQEE+SAMR+QYMR+GEGFL VF+
Sbjct: 24 IQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFA 83
Query: 63 VTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPYI 122
+ + SFE+I+++ QI RVKD D+ PM++VGNK D R V S AQ++AR IPYI
Sbjct: 84 INNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCD-LAARTVESRQAQDLARSYGIPYI 142
Query: 123 ECSAKVRINVDQAFHELVRIVLLH 146
E SAK R V+ AF+ LVR + H
Sbjct: 143 ETSAKTRQGVEDAFYTLVREIRQH 166
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 89.6 bits (221), Expect = 6e-24
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 2/142 (1%)
Query: 3 IESYFVTDYDPTIEDSYTKQCVI-DDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVF 61
+ F Y TI + + + +D RL + DTAGQE F ++ Y+R ++V+
Sbjct: 21 MYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVY 80
Query: 62 SVTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPY 121
+T+ NSF++ K+ + + D ML VGNK DL +RQVS + + A++L + +
Sbjct: 81 DITNVNSFQQTTKWIDDVRTERGSDVIIML-VGNKTDLADKRQVSIEEGERKAKELNVMF 139
Query: 122 IECSAKVRINVDQAFHELVRIV 143
IE SAK NV Q F + +
Sbjct: 140 IETSAKAGYNVKQLFRRVAAAL 161
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 89.2 bits (220), Expect = 9e-24
Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 2/143 (1%)
Query: 3 IESYFVTDYDPTIEDSY-TKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVF 61
+ F + T+ + K +D +L I DTAGQE + + Y R GF+L++
Sbjct: 26 ADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMY 85
Query: 62 SVTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPY 121
+T+ SF + + QI + D +L+VGNK D++ +R VSS + +A L +
Sbjct: 86 DITNEESFNAVQDWSTQI-KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEF 144
Query: 122 IECSAKVRINVDQAFHELVRIVL 144
E SAK INV Q F LV ++
Sbjct: 145 FEASAKDNINVKQTFERLVDVIC 167
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 88.8 bits (219), Expect = 2e-23
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 2/143 (1%)
Query: 3 IESYFVTDYDPTIEDSYTKQCVIDDI-PARLDILDTAGQEEFSAMREQYMRSGEGFLLVF 61
IE F D + TI + + + +L I DTAGQE F ++ Y R G LLV+
Sbjct: 26 IEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVY 85
Query: 62 SVTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPY 121
+T R ++ + + + +++ GNK DLD R+V+ ++A A++ + +
Sbjct: 86 DITSRETYNALTNWLTDARMLAS-QNIVIILCGNKKDLDADREVTFLEASRFAQENELMF 144
Query: 122 IECSAKVRINVDQAFHELVRIVL 144
+E SA NV++AF + R +L
Sbjct: 145 LETSALTGENVEEAFVQCARKIL 167
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 88.4 bits (218), Expect = 2e-23
Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Query: 3 IESYFVTDYDPTI-EDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVF 61
+ F +D TI + + ID +L I DTAGQE F ++ Y R G LLV+
Sbjct: 24 TDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVY 83
Query: 62 SVTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPY 121
+T R +F + + R ++++GNK+DL+ +R V + + AR+ + +
Sbjct: 84 DITRRETFNHLTSWLEDA-RQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIF 142
Query: 122 IECSAKVRINVDQAFHELVRIVLLHTKQ 149
+E SAK NV++AF + + +Q
Sbjct: 143 METSAKTACNVEEAFINTAKEIYRKIQQ 170
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 85.5 bits (210), Expect = 2e-22
Identities = 85/143 (59%), Positives = 109/143 (76%), Gaps = 1/143 (0%)
Query: 3 IESYFVTDYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFS 62
+ FV DYDPTIEDSY K ID+ A LD+LDTAGQEEFSAMREQYMR+G+GFL+V+S
Sbjct: 25 FQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYS 84
Query: 63 VTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPYI 122
VTD+ SFE + +FH+ ILRVKDR+ FPM++V NK DL H R+V+ + +A + IPYI
Sbjct: 85 VTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIPYI 144
Query: 123 ECSAKVR-INVDQAFHELVRIVL 144
E SAK +NVD+ FH+LVR++
Sbjct: 145 ETSAKDPPLNVDKTFHDLVRVIR 167
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 83.9 bits (206), Expect = 1e-21
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 3 IESYFVTDYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFS 62
+ F +Y PT+ D+Y+ ++D P L + DTAGQE++ +R + L+ FS
Sbjct: 26 TTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVSLICFS 85
Query: 63 VTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSS------------MDA 110
+ SFE + +R P+++VG K DL +
Sbjct: 86 LVSPASFENVRAKWYPEVR-HHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQG 144
Query: 111 QNVARQL-RIPYIECSAKVRINVDQAFHELVRIVL 144
+A+++ + Y+ECSA + + F E +R VL
Sbjct: 145 LAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 179
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 81.9 bits (201), Expect = 6e-21
Identities = 40/143 (27%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Query: 3 IESYFVTDYDPTIEDSYT-KQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVF 61
E+ F + T+ S+ K+ I L I DTAGQE F A+ Y R G +LV+
Sbjct: 24 CENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVY 83
Query: 62 SVTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPY 121
+TD +SF+++ + +++ ++ + ++ GNK DL+ +R VS +A++ A + +
Sbjct: 84 DITDEDSFQKVKNWVKELRKMLGNEICLCIV-GNKIDLEKERHVSIQEAESYAESVGAKH 142
Query: 122 IECSAKVRINVDQAFHELVRIVL 144
SAK +++ F +L + ++
Sbjct: 143 YHTSAKQNKGIEELFLDLCKRMI 165
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 80.0 bits (196), Expect = 3e-20
Identities = 69/142 (48%), Positives = 101/142 (71%), Gaps = 1/142 (0%)
Query: 3 IESYFVTDYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFS 62
++ FV YDPTIEDSY KQ +D L+ILDTAG E+F+AMR+ YM++G+GF LV+S
Sbjct: 24 VQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYS 83
Query: 63 VTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLR-IPY 121
+T +++F ++ QILRVKD ++ PM++VGNK DL+ +R V QN+ARQ +
Sbjct: 84 ITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAF 143
Query: 122 IECSAKVRINVDQAFHELVRIV 143
+E SAK +INV++ F++LVR +
Sbjct: 144 LESSAKSKINVNEIFYDLVRQI 165
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 80.0 bits (196), Expect = 4e-20
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 14/155 (9%)
Query: 3 IESYFVTDYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFS 62
F +Y PT+ D Y + L + DTAGQE++ +R + FL+ FS
Sbjct: 30 ANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFS 89
Query: 63 VTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQ------------VSSMDA 110
V + SF+ + + L+ + P L++G + DL + +
Sbjct: 90 VVNPASFQNVKEEWVPELK-EYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPICVEQG 148
Query: 111 QNVARQLR-IPYIECSAKVRINVDQAFHELVRIVL 144
Q +A+++ Y+ECSA + + F E + +L
Sbjct: 149 QKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 183
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 79.6 bits (195), Expect = 4e-20
Identities = 46/146 (31%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
Query: 3 IESYFVTDYDPTIEDSYTK-QCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVF 61
+ + F T TI + +D + I DTAGQE F ++R + R + LL F
Sbjct: 27 VTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTF 86
Query: 62 SVTDRNSFEEIYKFHRQILR---VKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLR 118
SV D SF+ + + ++ + VK+ + FP +++GNK D+ ++ +
Sbjct: 87 SVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDISERQVSTEEAQAWCRDNGD 146
Query: 119 IPYIECSAKVRINVDQAFHELVRIVL 144
PY E SAK NV AF E VR VL
Sbjct: 147 YPYFETSAKDATNVAAAFEEAVRRVL 172
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 79.7 bits (195), Expect = 6e-20
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 14/164 (8%)
Query: 3 IESYFVTDYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFS 62
+ F ++Y PT+ D+Y +I P L + DTAGQE++ +R + FL+ FS
Sbjct: 24 TTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFS 83
Query: 63 VTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSM------------DA 110
V +SFE + + + + P L+VG + DL A
Sbjct: 84 VVSPSSFENVKEKWVPEIT-HHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETA 142
Query: 111 QNVARQLR-IPYIECSAKVRINVDQAFHELVRIVLLHTKQCKNS 153
+ +AR L+ + Y+ECSA + + F E + L + K+
Sbjct: 143 EKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKSR 186
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 76.2 bits (186), Expect = 8e-19
Identities = 40/143 (27%), Positives = 75/143 (52%), Gaps = 2/143 (1%)
Query: 3 IESYFVTDYDPTIEDSYTKQCV-IDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVF 61
++ F + TI ++ Q V +DD + +I DTAGQE + ++ Y R + ++V+
Sbjct: 27 VKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVY 86
Query: 62 SVTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPY 121
+T+ SF K + L+ + + + GNKADL ++R V +AQ+ A + +
Sbjct: 87 DITNEESFARA-KNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLF 145
Query: 122 IECSAKVRINVDQAFHELVRIVL 144
+E SAK +NV++ F + + +
Sbjct: 146 METSAKTSMNVNEIFMAIAKKLP 168
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 75.8 bits (185), Expect = 1e-18
Identities = 51/142 (35%), Positives = 80/142 (56%), Gaps = 1/142 (0%)
Query: 3 IESYFVTDYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFS 62
++ F Y PT+ED+Y + D L I DT G +F AM+ + G F+LV+S
Sbjct: 23 VKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQFPAMQRLSISKGHAFILVYS 82
Query: 63 VTDRNSFEEIYKFHRQILRVK-DRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPY 121
+T R S EE+ + QI +K D + P+++VGNK D R+V S +A+ +AR + +
Sbjct: 83 ITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESPSREVQSSEAEALARTWKCAF 142
Query: 122 IECSAKVRINVDQAFHELVRIV 143
+E SAK+ NV + F EL+ +
Sbjct: 143 METSAKLNHNVKELFQELLNLE 164
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 73.1 bits (178), Expect = 1e-17
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Query: 3 IESYFVTDYDPTIEDSY-TKQCVIDDIPARLDILDTAGQEEF-SAMREQYMRSGEGFLLV 60
F + TI + + ID ++ + DTAGQE F +M + Y R+ + V
Sbjct: 23 CAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFV 82
Query: 61 FSVTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIP 120
+ +T+ SF + + + + ++ P ++VGNK DL QV + AQ A +P
Sbjct: 83 YDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMP 142
Query: 121 YIECSAKVR---INVDQAFHEL 139
E SAK +V+ F L
Sbjct: 143 LFETSAKNPNDNDHVEAIFMTL 164
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 73.1 bits (178), Expect = 2e-17
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 14/155 (9%)
Query: 3 IESYFVTDYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFS 62
+ F Y PT+ ++Y +D L + DTAG E++ +R + L+ FS
Sbjct: 23 SKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGLEDYDRLRPLSYPDTDVILMCFS 82
Query: 63 VTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSM------------DA 110
+ +S E I + ++ P+++VGNK DL + +
Sbjct: 83 IDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEG 141
Query: 111 QNVARQLR-IPYIECSAKVRINVDQAFHELVRIVL 144
+++A ++ Y+ECSAK + V + F R L
Sbjct: 142 RDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 176
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 73.2 bits (178), Expect = 2e-17
Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 7/149 (4%)
Query: 3 IESYFVTDYDPTIEDSYTKQCVI--DDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLV 60
+ + Y TI + + V D A + + DTAGQE F ++ + R + +LV
Sbjct: 23 VNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLGVAFYRGADCCVLV 82
Query: 61 FSVTDRNSFEEIYKFHRQILR---VKDRDEFPMLMVGNKADLDHQRQVSS-MDAQNVARQ 116
+ VT+ +SFE I + + L V + FP +++GNK D + +++ S AQ +A+
Sbjct: 83 YDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKIDAEESKKIVSEKSAQELAKS 142
Query: 117 L-RIPYIECSAKVRINVDQAFHELVRIVL 144
L IP SAK INVD AF E+ R L
Sbjct: 143 LGDIPLFLTSAKNAINVDTAFEEIARSAL 171
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 71.6 bits (174), Expect = 6e-17
Identities = 56/143 (39%), Positives = 84/143 (58%), Gaps = 2/143 (1%)
Query: 3 IESYFVTDYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFS 62
+ F+ +YDPT+E +Y Q IDD ++I +E + RE +MR GEGF+LV+
Sbjct: 23 LTKRFIWEYDPTLESTYRHQATIDDEVVSMEI-LDTAGQEDTIQREGHMRWGEGFVLVYD 81
Query: 63 VTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPYI 122
+TDR SFEE+ + +K +++VGNKADLDH RQVS+ + + +A +L +
Sbjct: 82 ITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADLDHSRQVSTEEGEKLATELACAFY 141
Query: 123 ECSAKV-RINVDQAFHELVRIVL 144
ECSA N+ + F+EL R V
Sbjct: 142 ECSACTGEGNITEIFYELCREVR 164
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 70.8 bits (172), Expect = 1e-16
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 3 IESYFVTDYDPTIE-DSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVF 61
+E F + +PTI TK + + I DTAG E F A+ Y R ++V+
Sbjct: 25 VEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGLERFRALAPMYYRGSAAAIIVY 84
Query: 62 SVTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPY 121
+T +F + K + LR + + GNK DL R+V DA++ A + +
Sbjct: 85 DITKEETFSTL-KNWVRELRQHGPPSIVVAIAGNKCDLTDVREVMERDAKDYADSIHAIF 143
Query: 122 IECSAKVRINVDQAFHELVRIV 143
+E SAK IN+++ F E+ R +
Sbjct: 144 VETSAKNAININELFIEISRRI 165
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 69.3 bits (168), Expect = 4e-16
Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 5/147 (3%)
Query: 3 IESYFVTDYDPTIEDSYTKQCVIDD-IPARLDILDTAGQEEFSAMREQYMRSGEGFLLVF 61
+ + F + +PTI ++ Q V + + +I DTAGQE F+++ Y R+ + L+V+
Sbjct: 24 VSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQAALVVY 83
Query: 62 SVTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDH---QRQVSSMDAQNVARQLR 118
VT SF + + L + + + +VGNK D+ +R+V+ + + +A +
Sbjct: 84 DVTKPQSFI-KARHWVKELHEQASKDIIIALVGNKIDMLQEGGERKVAREEGEKLAEEKG 142
Query: 119 IPYIECSAKVRINVDQAFHELVRIVLL 145
+ + E SAK NV+ F + + L
Sbjct: 143 LLFFETSAKTGENVNDVFLGIGEKIPL 169
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 69.3 bits (168), Expect = 5e-16
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 3 IESYFVTDYDPTIEDSYTKQC-VIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVF 61
+ F Y TI + + ++DD + I DTAGQE F ++ + R + +LVF
Sbjct: 23 VNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVF 82
Query: 62 SVTDRNSFEEIYKFHRQILRVK---DRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLR 118
VT N+F+ + + + L D + FP +++GNK DL++++ + +
Sbjct: 83 DVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNN 142
Query: 119 IPYIECSAKVRINVDQAFHELVRIVLLHTKQ 149
IPY E SAK INV+QAF + R L +
Sbjct: 143 IPYFETSAKEAINVEQAFQTIARNALKQETE 173
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 68.4 bits (166), Expect = 1e-15
Identities = 20/142 (14%), Positives = 45/142 (31%), Gaps = 3/142 (2%)
Query: 3 IESYFVTDYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFS 62
+ + TI + + ++ D GQ++ + Y +G + V
Sbjct: 29 LYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVD 88
Query: 63 VTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQR---QVSSMDAQNVARQLRI 119
DR+ +E + +I+ ++ + +L+ NK DL ++ R
Sbjct: 89 CADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNW 148
Query: 120 PYIECSAKVRINVDQAFHELVR 141
A + + L
Sbjct: 149 YVQPSCATSGDGLYEGLTWLTS 170
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 67.4 bits (163), Expect = 2e-15
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 15/156 (9%)
Query: 3 IESYFVTDYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFS 62
+ F +Y PT+ ++YT ID L + DT+G + +R + L+ F
Sbjct: 23 AKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFD 82
Query: 63 VTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADL------------DHQRQVSSMDA 110
++ + + + K + ++ ML+VG K+DL Q VS
Sbjct: 83 ISRPETLDSVLKKWKGEIQEFC-PNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQG 141
Query: 111 QNVARQLRI-PYIECSAKVRIN-VDQAFHELVRIVL 144
N+A+Q+ YIECSA N V FH +
Sbjct: 142 ANMAKQIGAATYIECSALQSENSVRDIFHVATLACV 177
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 66.7 bits (161), Expect = 4e-15
Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 3/143 (2%)
Query: 3 IESYFVTDYDPTI-EDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVF 61
+ F DY TI D +Q ++D RL + DTAGQEEF A+ + Y R + +LVF
Sbjct: 23 CKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVF 82
Query: 62 SVTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPY 121
S TDR SFE I + + V + + P +V NK DL + + +A+ +A++L++ +
Sbjct: 83 STTDRESFEAISSWREK--VVAEVGDIPTALVQNKIDLLDDSCIKNEEAEGLAKRLKLRF 140
Query: 122 IECSAKVRINVDQAFHELVRIVL 144
S K +NV + F L L
Sbjct: 141 YRTSVKEDLNVSEVFKYLAEKHL 163
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 65.8 bits (159), Expect = 6e-15
Identities = 18/135 (13%), Positives = 44/135 (32%), Gaps = 3/135 (2%)
Query: 10 DYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFSVTDRNSF 69
+ TI ++ + D GQ++ + Y ++ +G + V DR
Sbjct: 24 EIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERV 83
Query: 70 EEIYKFHRQILRVKDRDEFPMLMVGNK---ADLDHQRQVSSMDAQNVARQLRIPYIECSA 126
E + ++L + + +L+ NK + + +++ + R A
Sbjct: 84 NEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCA 143
Query: 127 KVRINVDQAFHELVR 141
+ + L
Sbjct: 144 TSGDGLYEGLDWLSN 158
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 64.4 bits (155), Expect = 3e-14
Identities = 47/139 (33%), Positives = 78/139 (56%)
Query: 3 IESYFVTDYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFS 62
+E FV YDPTIE+++TK ++ L ++DTAGQ+E+S + Y G++LV+S
Sbjct: 25 VEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQDEYSIFPQTYSIDINGYILVYS 84
Query: 63 VTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPYI 122
VT SFE I H ++L + + + P+++VGNK DL +R +S + + +A ++
Sbjct: 85 VTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHMERVISYEEGKALAESWNAAFL 144
Query: 123 ECSAKVRINVDQAFHELVR 141
E SAK F ++
Sbjct: 145 ESSAKENQTAVDVFRRIIL 163
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 61.9 bits (149), Expect = 3e-13
Identities = 23/142 (16%), Positives = 48/142 (33%), Gaps = 3/142 (2%)
Query: 3 IESYFVTDYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFS 62
+ + + + T + I R + D GQE + Y + E ++V
Sbjct: 32 LYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVD 91
Query: 63 VTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQ---RQVSSMDAQNVARQLRI 119
TDR + ++L +D + +L+ NK D+ ++S + +
Sbjct: 92 STDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQW 151
Query: 120 PYIECSAKVRINVDQAFHELVR 141
C A + Q ++
Sbjct: 152 HIQACCALTGEGLCQGLEWMMS 173
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 61.7 bits (148), Expect = 3e-13
Identities = 41/139 (29%), Positives = 69/139 (49%)
Query: 7 FVTDYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFSVTDR 66
+Y + V+D A L + D Q+ + M G+ +++V+SVTD+
Sbjct: 25 EDGPEAEAAGHTYDRSIVVDGEEASLMVYDIWEQDGGRWLPGHCMAMGDAYVIVYSVTDK 84
Query: 67 NSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPYIECSA 126
SFE+ + Q+ R + D+ P+++VGNK+DL R+VS + + A +IE SA
Sbjct: 85 GSFEKASELRVQLRRARQTDDVPIILVGNKSDLVRSREVSVDEGRACAVVFDCKFIETSA 144
Query: 127 KVRINVDQAFHELVRIVLL 145
+ NV F +VR + L
Sbjct: 145 ALHHNVQALFEGVVRQIRL 163
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 61.5 bits (148), Expect = 4e-13
Identities = 20/144 (13%), Positives = 45/144 (31%), Gaps = 3/144 (2%)
Query: 3 IESYFVTDYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFS 62
+ + + T + +L++ D GQ Y + V
Sbjct: 34 LYRLQIGEVVTTKPTIGFNVETLSYKNLKLNVWDLGGQTSIRPYWRCYYADTAAVIFVVD 93
Query: 63 VTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQ---RQVSSMDAQNVARQLRI 119
TD++ K +L+ ++ + +L+ NK D +VS +
Sbjct: 94 STDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPGALSASEVSKELNLVELKDRSW 153
Query: 120 PYIECSAKVRINVDQAFHELVRIV 143
+ SA + + L+ ++
Sbjct: 154 SIVASSAIKGEGITEGLDWLIDVI 177
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 59.0 bits (141), Expect = 3e-12
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 1/147 (0%)
Query: 1 MKIESYFVTDYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGE-GFLL 59
+ +D + ED+Y + ++D A + +LD + + + +L+
Sbjct: 24 AGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMWENKGENEWLHDHCMQVGDAYLI 83
Query: 60 VFSVTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRI 119
V+S+TDR SFE+ + Q+ R + ++ P+++VGNK+DL R+VS + + A
Sbjct: 84 VYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKSDLVRCREVSVSEGRACAVVFDC 143
Query: 120 PYIECSAKVRINVDQAFHELVRIVLLH 146
+IE SA V+ NV + F +VR V L
Sbjct: 144 KFIETSAAVQHNVKELFEGIVRQVRLR 170
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 58.4 bits (140), Expect = 5e-12
Identities = 20/99 (20%), Positives = 34/99 (34%), Gaps = 3/99 (3%)
Query: 46 MREQYMRSGEGFLLVFSVTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQV 105
Y + + + V DR FEE + ++L + P+L+ NK DL
Sbjct: 76 YWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLTAAPA 135
Query: 106 SSMD---AQNVARQLRIPYIECSAKVRINVDQAFHELVR 141
S + + R CSA V + + +
Sbjct: 136 SEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCK 174
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 58.1 bits (139), Expect = 5e-12
Identities = 26/143 (18%), Positives = 49/143 (34%), Gaps = 6/143 (4%)
Query: 2 KIESYFVTDYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVF 61
K V PT+ + +L+I D GQ+ + Y S +G + V
Sbjct: 21 KFNGEDVDTISPTLGFNIKTLEHRGF---KLNIWDVGGQKSLRSYWRNYFESTDGLIWVV 77
Query: 62 SVTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMD---AQNVARQLR 118
DR ++ + + +L + +L+ NK DL +++ + R
Sbjct: 78 DSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHH 137
Query: 119 IPYIECSAKVRINVDQAFHELVR 141
CSA ++ L+
Sbjct: 138 WRIQGCSAVTGEDLLPGIDWLLD 160
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 57.7 bits (138), Expect = 1e-11
Identities = 35/143 (24%), Positives = 72/143 (50%), Gaps = 5/143 (3%)
Query: 3 IESYFVTDYDPTI-EDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVF 61
+ F Y T+ + + + P + ++ DTAGQE+F +R+ Y + +++F
Sbjct: 24 LTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMF 83
Query: 62 SVTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRIPY 121
VT R +++ + +HR ++RV + P+++ GNK D+ ++ + R+ + Y
Sbjct: 84 DVTSRVTYKNVPNWHRDLVRVCE--NIPIVLCGNKVDIKDRKVKAKSIVF--HRKKNLQY 139
Query: 122 IECSAKVRINVDQAFHELVRIVL 144
+ SAK N ++ F L R ++
Sbjct: 140 YDISAKSNYNFEKPFLWLARKLI 162
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 55.8 bits (133), Expect = 6e-11
Identities = 32/145 (22%), Positives = 62/145 (42%), Gaps = 10/145 (6%)
Query: 10 DYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFSVTDRNSF 69
+ T + Y K+ ++D + I +EE A ++ + + VFS+ D NSF
Sbjct: 32 VLEKTESEQYKKEMLVDGQTHLVLI-----REEAGAPDAKFSGWADAVIFVFSLEDENSF 86
Query: 70 EEIYKFHRQILRVKDRDEFPMLM----VGNKADLDHQRQVSSMDAQNVARQL-RIPYIEC 124
+ + + H Q+ ++ + + ++ R V A+ + + R Y E
Sbjct: 87 QAVSRLHGQLSSLRGEGRGGLALALVGTQDRISASSPRVVGDARARALCADMKRCSYYET 146
Query: 125 SAKVRINVDQAFHELVRIVLLHTKQ 149
A +NVD+ F E+ + V+ KQ
Sbjct: 147 CATYGLNVDRVFQEVAQKVVTLRKQ 171
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 51.6 bits (122), Expect = 2e-09
Identities = 29/142 (20%), Positives = 51/142 (35%), Gaps = 6/142 (4%)
Query: 3 IESYFVTDYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFS 62
F D PT+ I + + D GQ F +M E+Y R + +
Sbjct: 23 ASGQFNEDMIPTV---GFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVD 79
Query: 63 VTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADL---DHQRQVSSMDAQNVARQLRI 119
D+ E +L P+L++GNK DL ++++ + + I
Sbjct: 80 AADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGALDEKELIEKMNLSAIQDREI 139
Query: 120 PYIECSAKVRINVDQAFHELVR 141
S K + N+D L++
Sbjct: 140 CCYSISCKEKDNIDITLQWLIQ 161
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 50.1 bits (118), Expect = 7e-09
Identities = 20/137 (14%), Positives = 43/137 (31%), Gaps = 3/137 (2%)
Query: 10 DYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFSVTDRNSF 69
+ TI + + + D G Y + + + V DR+
Sbjct: 29 EVVTTIPTIGFNVETVTYKNLKFQVWDLGGLTSIRPYWRCYYSNTDAVIYVVDSCDRDRI 88
Query: 70 EEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMD---AQNVARQLRIPYIECSA 126
+L ++ + +++ NK D++ S M + + + SA
Sbjct: 89 GISKSELVAMLEEEELRKAILVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSA 148
Query: 127 KVRINVDQAFHELVRIV 143
+D+A LV +
Sbjct: 149 TKGTGLDEAMEWLVETL 165
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 49.3 bits (116), Expect = 1e-08
Identities = 22/150 (14%), Positives = 53/150 (35%), Gaps = 13/150 (8%)
Query: 2 KIESYFVTDYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVF 61
+++ + PT + + + + + D G + + + Y G + +
Sbjct: 19 MLKNDRLATLQPTWHPTSEELAIGNI---KFTTFDLGGHIQARRLWKDYFPEVNGIVFLV 75
Query: 62 SVTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSM----------DAQ 111
D F+E + + + + P +++GNK D + + + +Q
Sbjct: 76 DAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSEAELRSALGLLNTTGSQ 135
Query: 112 NVARQLRIPYIECSAKVRINVDQAFHELVR 141
+ Q + CS +R +AF L +
Sbjct: 136 RIEGQRPVEVFMCSVVMRNGYLEAFQWLSQ 165
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 45.1 bits (105), Expect = 5e-07
Identities = 16/150 (10%), Positives = 40/150 (26%), Gaps = 15/150 (10%)
Query: 9 TDYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFSVTDRNS 68
+ + + D G + + + Y+ + G + + D
Sbjct: 36 DRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHIQARRVWKNYLPAINGIVFLVDCADHER 95
Query: 69 FEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSM---------------DAQNV 113
E + ++ + P+L++GNK D + +
Sbjct: 96 LLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKE 155
Query: 114 ARQLRIPYIECSAKVRINVDQAFHELVRIV 143
+ CS R + F + + +
Sbjct: 156 LNARPLEVFMCSVLKRQGYGEGFRWMAQYI 185
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 39.9 bits (92), Expect = 3e-05
Identities = 20/174 (11%), Positives = 38/174 (21%), Gaps = 39/174 (22%)
Query: 7 FVTDYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFSVTDR 66
++ + + D GQ + +++D
Sbjct: 22 MKIIHEAGT---GIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDY 78
Query: 67 ----------NSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSS--------- 107
N E K I K + +++ NK DL ++ S
Sbjct: 79 DLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEY 138
Query: 108 -----------------MDAQNVARQLRIPYIECSAKVRINVDQAFHELVRIVL 144
D I A NV F + +++
Sbjct: 139 AGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVII 192
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 32.7 bits (73), Expect = 0.012
Identities = 21/114 (18%), Positives = 45/114 (39%), Gaps = 9/114 (7%)
Query: 8 VTDYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSA-MREQYMRSGEGFLLVFSVTDR 66
D +I DS V ++ L ++D G E + +++ S + V
Sbjct: 25 YRDTQTSITDSSAIYKVNNNRGNSLTLIDLPGHESLRFQLLDRFKSSARAVVFVVDSAAF 84
Query: 67 NSF-EEIYKFHRQILRVKD--RDEFPMLMVGNKADLDHQRQVSSMDAQNVARQL 117
+++ +F Q+L ++ +L+ NK D+ + A+ + +QL
Sbjct: 85 QREVKDVAEFLYQVLIDSMALKNSPSLLIACNKQDI-----AMAKSAKLIQQQL 133
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 32.2 bits (72), Expect = 0.015
Identities = 22/171 (12%), Positives = 41/171 (23%), Gaps = 39/171 (22%)
Query: 10 DYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFSVTD---- 65
PT D ++D GQ + + + ++++
Sbjct: 28 SGVPTTGIIEYP---FDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQV 84
Query: 66 ------RNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQ-------- 111
N EE R I+ +++ NK DL ++ + S
Sbjct: 85 LVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGP 144
Query: 112 ------------------NVARQLRIPYIECSAKVRINVDQAFHELVRIVL 144
N I A N+ F + +L
Sbjct: 145 QRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTIL 195
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Sulfolobus solfataricus [TaxId:
2287]}
Length = 205
Score = 30.3 bits (67), Expect = 0.079
Identities = 20/114 (17%), Positives = 40/114 (35%), Gaps = 6/114 (5%)
Query: 31 RLDILDTAGQEEFSAMREQYMRSGEGFLLVFSVTDRNSFEEIYKFHRQILRVKDRDEFPM 90
R+ +D G E A +G +LV + + + + + + ++ +
Sbjct: 87 RISFIDAPGHEVLMATMLSGAALMDGAILVVAANEPFPQPQTREHFVALGIIGVKNLIIV 146
Query: 91 L----MVGNKADLDHQRQVSSMDAQNVARQLRIPYIECSAKVRINVDQAFHELV 140
+V + L RQ+ A +P I SA +IN+D +
Sbjct: 147 QNKVDVVSKEEALSQYRQIKQFTKGTWAEN--VPIIPVSALHKINIDSLIEGIE 198
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 28.5 bits (62), Expect = 0.26
Identities = 10/87 (11%), Positives = 28/87 (32%), Gaps = 4/87 (4%)
Query: 61 FSVTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADL----DHQRQVSSMDAQNVARQ 116
+ R + + + P ++ NK D + + +
Sbjct: 95 PEIIKRWEKRGEIPIDVEFYQFLRELDIPTIVAVNKLDKIKNVQEVINFLAEKFEVPLSE 154
Query: 117 LRIPYIECSAKVRINVDQAFHELVRIV 143
+ +I SAK N+++ + + ++
Sbjct: 155 IDKVFIPISAKFGDNIERLKNRIFEVI 181
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 204
Score = 27.6 bits (61), Expect = 0.58
Identities = 7/35 (20%), Positives = 12/35 (34%)
Query: 31 RLDILDTAGQEEFSAMREQYMRSGEGFLLVFSVTD 65
+D G ++ +G +LV S D
Sbjct: 68 HYSHVDCPGHADYIKNMITGAAQMDGAILVVSAAD 102
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal
(G) domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 341
Score = 27.4 bits (60), Expect = 0.91
Identities = 20/100 (20%), Positives = 42/100 (42%), Gaps = 6/100 (6%)
Query: 3 IESYFVT-DYDPTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVF 61
I+S ++ + + ED + D ++++D+ G +FS+ +R +G L+V
Sbjct: 68 IKSTAISLYSEMSDEDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVV 127
Query: 62 SVTDRNSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDH 101
+ E + +LR + ++V NK D
Sbjct: 128 D-----TIEGVCVQTETVLRQALGERIKPVVVINKVDRAL 162
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 25.5 bits (54), Expect = 2.6
Identities = 13/81 (16%), Positives = 32/81 (39%), Gaps = 5/81 (6%)
Query: 67 NSFEEIYKFHRQILRVKDRDEFPMLMVGNKADLDHQRQVSSMDAQNVARQLRI----PYI 122
+ Q+ P++++ KAD + + A+ V + L I I
Sbjct: 114 DLRHAPSNDDVQMYEFLKYYGIPVIVIATKADKIPKGKWDK-HAKVVRQTLNIDPEDELI 172
Query: 123 ECSAKVRINVDQAFHELVRIV 143
S++ + D+A+ + +++
Sbjct: 173 LFSSETKKGKDEAWGAIKKMI 193
>d2o70a1 a.288.1.1 (A:2-166) OHCU decarboxylase, UraD {Zebrafish
(Brachydanio rerio) [TaxId: 7955]}
Length = 165
Score = 25.3 bits (55), Expect = 2.7
Identities = 10/67 (14%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Query: 13 PTIEDSYTKQCVIDDIPARLDILDTAGQEEFSAMREQYMRSGEGFLLVFSVTDRNSFEEI 72
+ T + + A + LD+A + +Y GF V N + +
Sbjct: 73 DLQSGTLTPESQEEQSQAGMTTLDSAEIVHMYRLNSEYKER-FGFPFVICARLNNKADIV 131
Query: 73 YKFHRQI 79
+ ++
Sbjct: 132 RQLSERL 138
>d1st6a4 a.24.9.1 (A:372-488) Vinculin {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 117
Score = 25.1 bits (55), Expect = 2.9
Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Query: 83 KDRDEFPML------MVGNKADLDHQRQVSSMDAQNVARQLR 118
K+RD+ + +DL + S +A+ +A+Q+
Sbjct: 55 KERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALAKQIA 96
>d1hcza2 b.84.2.2 (A:168-230) Cytochrome f, small domain {Turnip
(Brassica rapa) [TaxId: 3711]}
Length = 63
Score = 23.8 bits (52), Expect = 3.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 11 YDPTIEDSYTKQCVIDDIPARLDILDTAGQE 41
Y+ TI D+ ++ VID IP L++L + G+
Sbjct: 23 YEITIVDASNERQVIDIIPRGLELLVSEGES 53
>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis
semifasciata) [TaxId: 30493]}
Length = 109
Score = 24.5 bits (53), Expect = 3.7
Identities = 14/90 (15%), Positives = 30/90 (33%), Gaps = 9/90 (10%)
Query: 26 DDIPARLDILDTAGQ---EEFSAMREQYMRSGEGFLLVFSVTDRN-----SFEEIYKFHR 77
DDI + G + F + ++ VF + D++ EE+ +
Sbjct: 9 DDINKAISAFKDPGTFDYKRFFHLVGLKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLK 68
Query: 78 QILRV-KDRDEFPMLMVGNKADLDHQRQVS 106
+D ++ + D DH ++
Sbjct: 69 GFSAHGRDLNDTETKALLAAGDSDHDGKIG 98
>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId:
8010]}
Length = 109
Score = 23.7 bits (51), Expect = 8.1
Identities = 19/92 (20%), Positives = 29/92 (31%), Gaps = 13/92 (14%)
Query: 26 DDIPARLDILDTAGQ---EEFSAMREQYMRSGEGFLLVFSVTDRN-----SFEEIYKFHR 77
DDI LD + G ++F A+ S VF D + EE+ +
Sbjct: 9 DDIKKALDAVKAEGSFNHKKFFALVGLKAMSANDVKKVFKAIDADASGFIEEEELKFVLK 68
Query: 78 QIL---RVKDRDEFPMLMVGNKADLDHQRQVS 106
R E + AD D ++
Sbjct: 69 SFAADGRDLTDAETKAFL--KAADKDGDGKIG 98
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.324 0.137 0.393
Gapped
Lambda K H
0.267 0.0576 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 586,191
Number of extensions: 25294
Number of successful extensions: 179
Number of sequences better than 10.0: 1
Number of HSP's gapped: 150
Number of HSP's successfully gapped: 73
Length of query: 159
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 81
Effective length of database: 1,336,656
Effective search space: 108269136
Effective search space used: 108269136
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 49 (23.0 bits)