BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy11293
         (111 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|3SEK|C Chain C, Crystal Structure Of The Myostatin:follistatin-Like 3
           Complex
          Length = 209

 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 7/94 (7%)

Query: 13  ILDFLYACYIFPPELTNPCQENTCQYGAKCIPSEDGTSYKCECPQECPNYGDHTGSRPVC 72
           +L FL   +  P    + C    C  G  C     G   +CEC  +C           VC
Sbjct: 48  LLGFLGLVHCLP--CKDSCDGVECGPGKAC--RMLGGRPRCECAPDCSGL---PARLQVC 100

Query: 73  GSNGVDYKDLCEFQRASCSTKTNLTIKYYGKCGK 106
           GS+G  Y+D CE + A C    +L++ Y G+C K
Sbjct: 101 GSDGATYRDECELRAARCRGHPDLSVMYRGRCRK 134



 Score = 29.3 bits (64), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 16/74 (21%), Positives = 35/74 (47%), Gaps = 1/74 (1%)

Query: 31  CQENTCQYGAKCIPSEDGTSYKCECPQECPNYGDHTGSRPVCGSNGVDYKDLCEFQRASC 90
           C+   C     C+  + G+++   C +  P     +  + +CG+N V Y   C  ++A+C
Sbjct: 136 CEHVVCPRPQSCVVDQTGSAHCVVC-RAAPCPVPSSPGQELCGNNNVTYISSCHMRQATC 194

Query: 91  STKTNLTIKYYGKC 104
               ++ +++ G C
Sbjct: 195 FLGRSIGVRHAGSC 208


>pdb|3B4V|C Chain C, X-Ray Structure Of Activin In Complex With Fstl3
 pdb|3B4V|D Chain D, X-Ray Structure Of Activin In Complex With Fstl3
 pdb|3B4V|G Chain G, X-Ray Structure Of Activin In Complex With Fstl3
 pdb|3B4V|H Chain H, X-Ray Structure Of Activin In Complex With Fstl3
          Length = 237

 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 7/94 (7%)

Query: 13  ILDFLYACYIFPPELTNPCQENTCQYGAKCIPSEDGTSYKCECPQECPNYGDHTGSRPVC 72
           +L FL   +  P    + C    C  G  C     G   +CEC  +C           VC
Sbjct: 57  LLGFLGLVHCLP--CKDSCDGVECGPGKAC--RMLGGRPRCECAPDCSGL---PARLQVC 109

Query: 73  GSNGVDYKDLCEFQRASCSTKTNLTIKYYGKCGK 106
           GS+G  Y+D CE + A C    +L++ Y G+C K
Sbjct: 110 GSDGATYRDECELRAARCRGHPDLSVMYRGRCRK 143



 Score = 28.9 bits (63), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 16/74 (21%), Positives = 35/74 (47%), Gaps = 1/74 (1%)

Query: 31  CQENTCQYGAKCIPSEDGTSYKCECPQECPNYGDHTGSRPVCGSNGVDYKDLCEFQRASC 90
           C+   C     C+  + G+++   C +  P     +  + +CG+N V Y   C  ++A+C
Sbjct: 145 CEHVVCPRPQSCVVDQTGSAHCVVC-RAAPCPVPSSPGQELCGNNNVTYISSCHMRQATC 203

Query: 91  STKTNLTIKYYGKC 104
               ++ +++ G C
Sbjct: 204 FLGRSIGVRHAGSC 217


>pdb|2KCX|A Chain A, Solution Nmr Structure Of Kazal-1 Domain Of Human
           Follistatin-Related Protein 3 (Fstl-3). Northeast
           Structural Genomics Target Hr6186a
          Length = 74

 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 7/72 (9%)

Query: 39  GAKCIPSED----GTSYKCECPQECPNYGDHTGSRPVCGSNGVDYKDLCEFQRASCSTKT 94
           G +C P +     G   +CEC  +C           VCGS+G  Y+D CE + A C    
Sbjct: 6   GVECGPGKACRMLGGRPRCECAPDCSGL---PARLQVCGSDGATYRDECELRAARCRGHP 62

Query: 95  NLTIKYYGKCGK 106
           +L++ Y G+C K
Sbjct: 63  DLSVMYRGRCRK 74


>pdb|2ARP|F Chain F, Activin A In Complex With Fs12 Fragment Of Follistatin
          Length = 152

 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 4/81 (4%)

Query: 31  CQENTCQYGAKCIPSEDGTSYKCECPQECPNYGDHTGSRPVCGSNGVDYKDLCEFQRASC 90
           C+   C  G KC  ++     +C C  +C N    T   PVCG +G  Y++ C   +A C
Sbjct: 6   CENVDCGPGKKCRMNKKNKP-RCVCAPDCSNI---TWKGPVCGLDGKTYRNECALLKARC 61

Query: 91  STKTNLTIKYYGKCGKWILEI 111
             +  L ++Y GKC K   ++
Sbjct: 62  KEQPELEVQYQGKCKKTCRDV 82



 Score = 36.2 bits (82), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)

Query: 31  CQENTCQYGAKCIPSEDGTSYKCECPQECPNYGDHTGSRPVCGSNGVDYKDLCEFQRASC 90
           C++  C   + C+  +   +Y   C + CP     +  + +CG++GV Y   C  ++A+C
Sbjct: 79  CRDVFCPGSSTCVVDQTNNAYCVTCNRICPE--PSSSEQSLCGNDGVTYSSACHLRKATC 136

Query: 91  STKTNLTIKYYGKCGK 106
               ++ + Y GKC K
Sbjct: 137 LLGRSIGLAYEGKCIK 152


>pdb|2P6A|D Chain D, The Structure Of The Activin:follistatin 315 Complex
 pdb|2P6A|C Chain C, The Structure Of The Activin:follistatin 315 Complex
          Length = 315

 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 4/81 (4%)

Query: 31  CQENTCQYGAKCIPSEDGTSYKCECPQECPNYGDHTGSRPVCGSNGVDYKDLCEFQRASC 90
           C+   C  G KC  ++     +C C  +C N    T   PVCG +G  Y++ C   +A C
Sbjct: 66  CENVDCGPGKKCRMNKKNKP-RCVCAPDCSNI---TWKGPVCGLDGKTYRNECALLKARC 121

Query: 91  STKTNLTIKYYGKCGKWILEI 111
             +  L ++Y G+C K   ++
Sbjct: 122 KEQPELEVQYQGRCKKTCRDV 142



 Score = 37.4 bits (85), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 31  CQENTCQYGAKCIPSEDGTSYKCE-CPQECPNYGDHTGSRPVCGSNGVDYKDLCEFQRAS 89
           C++  C  G KC+        +C  C + CP   D     PVC S+   Y   C  + A+
Sbjct: 216 CEDIQCTGGKKCLWDFKVGRGRCSLCDELCP---DSKSDEPVCASDNATYASECAMKEAA 272

Query: 90  CSTKTNLTIKYYGKC 104
           CS+   L +K+ G C
Sbjct: 273 CSSGVLLEVKHSGSC 287



 Score = 35.8 bits (81), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)

Query: 31  CQENTCQYGAKCIPSEDGTSYKCECPQECPNYGDHTGSRPVCGSNGVDYKDLCEFQRASC 90
           C++  C   + C+  +   +Y   C + CP     +  + +CG++GV Y   C  ++A+C
Sbjct: 139 CRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPA--SSEQYLCGNDGVTYSSACHLRKATC 196

Query: 91  STKTNLTIKYYGKCGK 106
               ++ + Y GKC K
Sbjct: 197 LLGRSIGLAYEGKCIK 212


>pdb|2B0U|C Chain C, The Structure Of The Follistatin:activin Complex
 pdb|2B0U|D Chain D, The Structure Of The Follistatin:activin Complex
 pdb|3HH2|C Chain C, Crystal Structure Of The Myostatin:follistatin 288 Complex
 pdb|3HH2|D Chain D, Crystal Structure Of The Myostatin:follistatin 288 Complex
          Length = 288

 Score = 38.5 bits (88), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 4/81 (4%)

Query: 31  CQENTCQYGAKCIPSEDGTSYKCECPQECPNYGDHTGSRPVCGSNGVDYKDLCEFQRASC 90
           C+   C  G KC  ++     +C C  +C N    T   PVCG +G  Y++ C   +A C
Sbjct: 66  CENVDCGPGKKCRMNKKNKP-RCVCAPDCSNI---TWKGPVCGLDGKTYRNECALLKARC 121

Query: 91  STKTNLTIKYYGKCGKWILEI 111
             +  L ++Y G+C K   ++
Sbjct: 122 KEQPELEVQYQGRCKKTCRDV 142



 Score = 36.6 bits (83), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 31  CQENTCQYGAKCIPSEDGTSYKCE-CPQECPNYGDHTGSRPVCGSNGVDYKDLCEFQRAS 89
           C++  C  G KC+        +C  C + CP   D     PVC S+   Y   C  + A+
Sbjct: 216 CEDIQCTGGKKCLWDFKVGRGRCSLCDELCP---DSKSDEPVCASDNATYASECAMKEAA 272

Query: 90  CSTKTNLTIKYYGKC 104
           CS+   L +K+ G C
Sbjct: 273 CSSGVLLEVKHSGSC 287



 Score = 35.0 bits (79), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)

Query: 31  CQENTCQYGAKCIPSEDGTSYKCECPQECPNYGDHTGSRPVCGSNGVDYKDLCEFQRASC 90
           C++  C   + C+  +   +Y   C + CP     +  + +CG++GV Y   C  ++A+C
Sbjct: 139 CRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPA--SSEQYLCGNDGVTYSSACHLRKATC 196

Query: 91  STKTNLTIKYYGKCGK 106
               ++ + Y GKC K
Sbjct: 197 LLGRSIGLAYEGKCIK 212


>pdb|1LR7|A Chain A, Crystal Structure Of Fs1, The Heparin-Binding Domain Of
           Follistatin, Complexed With The Heparin Analogue Sucrose
           Octasulphate (Sos)
 pdb|1LR8|A Chain A, Crystal Structure Of Fs1, The Heparin-Binding Domain Of
           Follistatin, Complexed With The Heparin Analogue D-Myo-
           Inositol Hexasulphate (Ins6s)
 pdb|1LR9|A Chain A, Structure Of Fs1, The Heparin-Binding Domain Of
           Follistatin
          Length = 74

 Score = 38.5 bits (88), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 4/74 (5%)

Query: 31  CQENTCQYGAKCIPSEDGTSYKCECPQECPNYGDHTGSRPVCGSNGVDYKDLCEFQRASC 90
           C+   C  G KC  ++     +C C  +C N    T   PVCG +G  Y++ C   +A C
Sbjct: 4   CENVDCGPGKKCRMNKKNKP-RCVCAPDCSNI---TWKGPVCGLDGKTYRNECALLKARC 59

Query: 91  STKTNLTIKYYGKC 104
             +  L ++Y GKC
Sbjct: 60  KEQPELEVQYQGKC 73


>pdb|1Y1B|A Chain A, Solution Structure Of Anemonia Elastase Inhibitor
          Length = 48

 Score = 35.0 bits (79), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 14/35 (40%), Positives = 22/35 (62%)

Query: 70  PVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           PVCGS+G+ Y + C    ASC + T + + + G+C
Sbjct: 14  PVCGSDGITYGNACMLLGASCRSDTPIELVHKGRC 48


>pdb|1OVO|A Chain A, Crystallographic Refinement Of Japanese Quail Ovomucoid, A
           Kazal-Type Inhibitor, And Model Building Studies Of
           Complexes With Serine Proteases
 pdb|1OVO|B Chain B, Crystallographic Refinement Of Japanese Quail Ovomucoid, A
           Kazal-Type Inhibitor, And Model Building Studies Of
           Complexes With Serine Proteases
 pdb|1OVO|C Chain C, Crystallographic Refinement Of Japanese Quail Ovomucoid, A
           Kazal-Type Inhibitor, And Model Building Studies Of
           Complexes With Serine Proteases
 pdb|1OVO|D Chain D, Crystallographic Refinement Of Japanese Quail Ovomucoid, A
           Kazal-Type Inhibitor, And Model Building Studies Of
           Complexes With Serine Proteases
 pdb|3OVO|A Chain A, Refined X-Ray Crystal Structures Of The Reactive Site
           Modified Ovomucoid Inhibitor Third Domains From Silver
           Pheasant (Omsvp3(Asterisk)) And From Japanese Quail
           (Omjpq3(Asterisk))
          Length = 56

 Score = 34.7 bits (78), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RPVCGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 21  RPVCGSDNKTYSNKCNFCNAVVESNGTLTLNHFGKC 56


>pdb|2GKT|I Chain I, Crystal Structure Of The P14'-Ala32 Variant Of The N-
           Terminally Truncated Omtky3-Del(1-5)
 pdb|2GKV|A Chain A, Crystal Structure Of The Sgpb:p14'-Ala32 Omtky3-Del(1-5)
           Complex
 pdb|2GKV|B Chain B, Crystal Structure Of The Sgpb:p14'-Ala32 Omtky3-Del(1-5)
           Complex
          Length = 51

 Score = 33.5 bits (75), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 16  RPLCGSDNKTYANKCNFCNAVVESNGTLTLSHFGKC 51


>pdb|2OVO|A Chain A, The Crystal And Molecular Structure Of The Third Domain Of
           Silver Pheasant Ovomucoid (Omsvp3)
          Length = 56

 Score = 33.1 bits (74), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 21  RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 56


>pdb|1CHO|I Chain I, Crystal And Molecular Structures Of The Complex Of Alpha-
           Chymotrypsin With Its Inhibitor Turkey Ovomucoid Third
           Domain At 1.8 Angstroms Resolution
 pdb|3SGB|I Chain I, Structure Of The Complex Of Streptomyces Griseus Protease
           B And The Third Domain Of The Turkey Ovomucoid Inhibitor
           At 1.8 Angstroms Resolution
 pdb|1PPF|I Chain I, X-Ray Crystal Structure Of The Complex Of Human Leukocyte
           Elastase (Pmn Elastase) And The Third Domain Of The
           Turkey Ovomucoid Inhibitor
 pdb|1OMT|A Chain A, Solution Structure Of Ovomucoid (Third Domain) From
           Domestic Turkey (298k, Ph 4.1) (Nmr, 50 Structures)
           (Standard Noesy Analysis)
 pdb|1OMU|A Chain A, Solution Structure Of Ovomucoid (Third Domain) From
           Domestic Turkey (298k, Ph 4.1) (Nmr, 50 Structures)
           (Refined Model Using Network Editing Analysis)
 pdb|1TUR|A Chain A, Solution Structure Of Turkey Ovomucoid Third Domain As
           Determined From Nuclear Magnetic Resonance Data
 pdb|1TUS|A Chain A, Solution Structure Of Reactive-Site Hydrolyzed Turkey
           Ovomucoid Third Domain By Nuclear Magnetic Resonance And
           Distance Geometry Methods
          Length = 56

 Score = 33.1 bits (74), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 21  RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 56


>pdb|4OVO|A Chain A, Refined X-Ray Crystal Structures Of The Reactive Site
           Modified Ovomucoid Inhibitor Third Domains From Silver
           Pheasant (Omsvp3(Asterisk)) And From Japanese Quail
           (Omjpq3(Asterisk))
          Length = 56

 Score = 33.1 bits (74), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 21  RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 56


>pdb|1IY5|A Chain A, Solution Structure Of Wild Type Omsvp3
          Length = 54

 Score = 33.1 bits (74), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 19  RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 54


>pdb|2NU1|I Chain I, Molecular Structures Of The Complexes Of Sgpb With Omtky3
           Aromatic P1 Variants Trp18i, His18i, Phe18i And Tyr18i
          Length = 51

 Score = 33.1 bits (74), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 16  RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51


>pdb|1M8B|A Chain A, Solution Structure Of The C State Of Turkey Ovomucoid At
           Ph 2.5
 pdb|1M8C|A Chain A, Solution Structure Of The T State Of Turkey Ovomucoid At
           Ph 2.5
          Length = 56

 Score = 33.1 bits (74), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 21  RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 56


>pdb|1SGE|I Chain I, Glu 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
           Complexed With Streptomyces Griseus Proteinase B At Ph
           6.5
 pdb|2SGE|I Chain I, Glu 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
           Complexed With Streptomyces Griseus Proteinase B At Ph
           10.7
          Length = 51

 Score = 33.1 bits (74), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 16  RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51


>pdb|2NU0|I Chain I, Molecular Structures Of The Complexes Of Sgpb With Omtky3
           Aromatic P1 Variants Trp18i, His18i, Phe18i, And Tyr18i
          Length = 51

 Score = 33.1 bits (74), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 16  RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51


>pdb|1SGP|I Chain I, Ala 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
           Complexed With Streptomyces Griseus Proteinase B
          Length = 51

 Score = 33.1 bits (74), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 16  RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51


>pdb|1CSO|I Chain I, Crystal Structure Of The Omtky3 P1 Variant Omtky3-Ile18i
           In Complex With Sgpb
          Length = 51

 Score = 33.1 bits (74), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 16  RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51


>pdb|1SGR|I Chain I, Leu 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
           Complexed With Streptomyces Griseus Proteinase B
 pdb|1R0R|I Chain I, 1.1 Angstrom Resolution Structure Of The Complex Between
           The Protein Inhibitor, Omtky3, And The Serine Protease,
           Subtilisin Carlsberg
 pdb|2GKR|I Chain I, Crystal Structure Of The N-Terminally Truncated Omtky3-
           Del(1-5)
          Length = 51

 Score = 33.1 bits (74), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 16  RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51


>pdb|2SGQ|I Chain I, Gln 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
           Complexed With Streptomyces Griseus Proteinase B At Ph
           6.5
 pdb|3SGQ|I Chain I, Gln 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
           Complexed With Streptomyces Griseus Proteinase B At Ph
           10.7
          Length = 51

 Score = 33.1 bits (74), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 16  RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51


>pdb|2SGF|I Chain I, Phe 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
           Complexed With Streptomyces Griseus Proteinase B
          Length = 51

 Score = 33.1 bits (74), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 16  RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51


>pdb|1CT4|I Chain I, Crystal Structure Of The Omtky3 P1 Variant Omtky3-Val18i
           In Complex With Sgpb
          Length = 51

 Score = 33.1 bits (74), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 16  RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51


>pdb|2SGP|I Chain I, Pro 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
           Complexed With Streptomyces Griseus Proteinase B At Ph
           6.5
          Length = 51

 Score = 33.1 bits (74), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 16  RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51


>pdb|1DS2|I Chain I, Crystal Structure Of Sgpb:omtky3-Coo-Leu18i
          Length = 51

 Score = 33.1 bits (74), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 16  RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51


>pdb|1CT0|I Chain I, Crystal Structure Of The Omtky3 P1 Variant Omtky3-Ser18i
           In Complex With Sgpb
          Length = 51

 Score = 33.1 bits (74), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 16  RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51


>pdb|1SGQ|I Chain I, Gly 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
           Complexed With Streptomyces Griseus Proteinase B
          Length = 51

 Score = 33.1 bits (74), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 16  RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51


>pdb|1SGN|I Chain I, Asn 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
           Complexed With Streptomyces Griseus Proteinase B
          Length = 51

 Score = 33.1 bits (74), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 16  RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51


>pdb|1YU6|C Chain C, Crystal Structure Of The Subtilisin Carlsberg:omtky3
           Complex
 pdb|1YU6|D Chain D, Crystal Structure Of The Subtilisin Carlsberg:omtky3
           Complex
          Length = 185

 Score = 33.1 bits (74), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 150 RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 185



 Score = 28.1 bits (61), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 13/87 (14%)

Query: 37  QYGAKCIPSEDGTSYKCECPQECPNYGDHTGSR------------PVCGSNGVDYKDLCE 84
           +YG       DG   +   P +C  Y + T               PVCG++GV Y + C 
Sbjct: 48  EYGTNISKEHDGECRE-AVPMDCSRYPNTTSEEGKVMILCNKALNPVCGTDGVTYDNECV 106

Query: 85  FQRASCSTKTNLTIKYYGKCGKWILEI 111
               +    T++  K+ G+C K +  +
Sbjct: 107 LCAHNLEQGTSVGKKHDGECRKELAAV 133


>pdb|1CT2|I Chain I, Crystal Structure Of The Omtky3 P1 Variant Omtky3-Thr18i
           In Complex With Sgpb
          Length = 51

 Score = 33.1 bits (74), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 16  RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51


>pdb|1SGD|I Chain I, Asp 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
           Complexed With Streptomyces Griseus Proteinase B At Ph
           6.5
 pdb|2SGD|I Chain I, Asp 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
           Complexed With Streptomyces Griseus Proteinase B At Ph
           10.7
          Length = 51

 Score = 33.1 bits (74), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 16  RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51


>pdb|1SGY|I Chain I, Tyr 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
           Complexed With Streptomyces Griseus Proteinase B At Ph
           6.5
          Length = 51

 Score = 33.1 bits (74), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 16  RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51


>pdb|1DS3|I Chain I, Crystal Structure Of Omtky3-Ch2-Asp19i
          Length = 51

 Score = 32.7 bits (73), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 16  RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51


>pdb|1HJA|I Chain I, Lys 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
           Complexed With Alpha-Chymotrypsin
 pdb|2NU3|I Chain I, Accommodation Of Positively-Charged Residues In A
           Hydrophobic Specificity Pocket: Crystal Structures Of
           Sgpb In Complex With Omtky3 Variants Lys18i And Arg18i
 pdb|2NU4|I Chain I, Accommodation Of Positively-Charged Residues In A
           Hydrophobic Specificity Pocket: Crystal Structures Of
           Sgpb In Complex With Omtky3 Variants Lys18i And Arg18i
          Length = 51

 Score = 32.7 bits (73), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 16  RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51


>pdb|2NU2|I Chain I, Accommodation Of Positively-Charged Residues In A
           Hydrophobic Specificity Pocket: Crystal Structures Of
           Sgpb In Complex With Omtky3 Variants Lys18i And Arg18i
          Length = 51

 Score = 32.7 bits (73), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 16  RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51


>pdb|1BUS|A Chain A, Solution Conformation Of Proteinase Inhibitor Iia From
           Bull Seminal Plasma By 1h Nuclear Magnetic Resonance And
           Distance Geometry
 pdb|2BUS|A Chain A, Solution Conformation Of Proteinase Inhibitor Iia From
           Bull Seminal Plasma By 1h Nuclear Magnetic Resonance And
           Distance Geometry
          Length = 57

 Score = 32.3 bits (72), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 68  SRPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           S P CGSNG  Y + C F +A   +   + +K+ GKC
Sbjct: 21  SNPHCGSNGETYGNKCAFCKAVMKSGGKINLKHRGKC 57


>pdb|1TBR|R Chain R, Crystal Structure Of Insect Derived Double Domain Kazal
           Inhibitor Rhodniin In Complex With Thrombin
 pdb|1TBR|S Chain S, Crystal Structure Of Insect Derived Double Domain Kazal
           Inhibitor Rhodniin In Complex With Thrombin
 pdb|1TBQ|R Chain R, Crystal Structure Of Insect Derived Double Domain Kazal
           Inhibitor Rhodniin In Complex With Thrombin
 pdb|1TBQ|S Chain S, Crystal Structure Of Insect Derived Double Domain Kazal
           Inhibitor Rhodniin In Complex With Thrombin
          Length = 103

 Score = 32.0 bits (71), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 19/87 (21%)

Query: 28  TNPCQENTCQYGAK----------CIPSEDGTSYKCECPQECPNYGDHTGSRPVCGSNGV 77
           +NPC  N  ++  K          C P ED         QEC    D    +PVCGS+ +
Sbjct: 24  SNPCTLNCAKFNGKPELVKVHDGPCEPDEDEDVC-----QEC----DGDEYKPVCGSDDI 74

Query: 78  DYKDLCEFQRASCSTKTNLTIKYYGKC 104
            Y + C  + AS S+   + +K+ G C
Sbjct: 75  TYDNNCRLECASISSSPGVELKHEGPC 101


>pdb|1IY6|A Chain A, Solution Structure Of Omsvp3 Variant, P14cN39C
          Length = 54

 Score = 31.6 bits (70), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           RP+CGS+   Y + C F  A   +   LT+ ++GKC
Sbjct: 19  RPLCGSDNKTYGNKCNFCCAVVESNGTLTLSHFGKC 54


>pdb|1Y1C|A Chain A, Solution Structure Of Anemonia Elastase Inhibitor Analogue
          Length = 48

 Score = 31.2 bits (69), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 13/35 (37%), Positives = 21/35 (60%)

Query: 70  PVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           PVCGS+G+ Y + C    AS  + T + + + G+C
Sbjct: 14  PVCGSDGITYGNACMLLCASARSDTPIELVHKGRC 48


>pdb|2V53|A Chain A, Crystal Structure Of A Sparc-Collagen Complex
          Length = 230

 Score = 30.8 bits (68), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 8/84 (9%)

Query: 27  LTNPCQENTCQYGAKCIPSEDGTSY-KCECPQECPNYGDHTGSRPVCGSNGVDYKDLCEF 85
           L NPCQ + C++G  C   E+ T    C+ P  CP          VC ++   +   C F
Sbjct: 3   LANPCQNHHCKHGKVCELDENNTPMCVCQDPTSCP--APIGEFEKVCSNDNKTFDSSCHF 60

Query: 86  QRASCSTK-----TNLTIKYYGKC 104
               C+ +       L + Y G C
Sbjct: 61  FATKCTLEGTKKGHKLHLDYIGPC 84


>pdb|2VRK|A Chain A, Structure Of A Seleno-Methionyl Derivative Of Wild Type
           Arabinofuranosidase From Thermobacillus Xylanilyticus
 pdb|2VRK|B Chain B, Structure Of A Seleno-Methionyl Derivative Of Wild Type
           Arabinofuranosidase From Thermobacillus Xylanilyticus
 pdb|2VRK|C Chain C, Structure Of A Seleno-Methionyl Derivative Of Wild Type
           Arabinofuranosidase From Thermobacillus Xylanilyticus
          Length = 496

 Score = 30.4 bits (67), Expect = 0.29,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%)

Query: 61  NYGDHTGSRPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKCGKW 107
           NYGD+   +  CG+N  DY       + +      L++ YY   G W
Sbjct: 202 NYGDNKLHKIACGANTADYHWTEVLXKQAAPFXHGLSLHYYTVPGPW 248


>pdb|2VRQ|A Chain A, Structure Of An Inactive Mutant Of Arabinofuranosidase
           From Thermobacillus Xylanilyticus In Complex With A
           Pentasaccharide
 pdb|2VRQ|B Chain B, Structure Of An Inactive Mutant Of Arabinofuranosidase
           From Thermobacillus Xylanilyticus In Complex With A
           Pentasaccharide
 pdb|2VRQ|C Chain C, Structure Of An Inactive Mutant Of Arabinofuranosidase
           From Thermobacillus Xylanilyticus In Complex With A
           Pentasaccharide
          Length = 496

 Score = 30.0 bits (66), Expect = 0.32,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%)

Query: 61  NYGDHTGSRPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKCGKW 107
           NYGD+   +  CG+N  DY       + +      L++ YY   G W
Sbjct: 202 NYGDNKLHKIACGANTADYHWTEVLMKQAAPFMHGLSLHYYTVPGPW 248


>pdb|1PCE|A Chain A, Solution Structure And Dynamics Of Pec-60, A Protein Of
           The Kazal Type Inhibitor Family, Determined By Nuclear
           Magnetic Resonance Spectroscopy
          Length = 60

 Score = 29.3 bits (64), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 70  PVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           PVCG++GV Y+  C+   A    K ++ I   G+C
Sbjct: 26  PVCGTDGVTYESECKLCLARIENKQDIQIVKDGEC 60


>pdb|1UVG|A Chain A, Solution Structure Of The 15th Domain Of Lekti
          Length = 78

 Score = 28.5 bits (62), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           +PVCG +G  Y + C     +   +TN  I+  GKC
Sbjct: 25  KPVCGDDGQTYNNPCMLCHENLIRQTNTHIRSTGKC 60


>pdb|1UVF|A Chain A, Solution Structure Of The Structured Part Of The 15th
           Domain Of Lekti
          Length = 61

 Score = 28.5 bits (62), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
           +PVCG +G  Y + C     +   +TN  I+  GKC
Sbjct: 25  KPVCGDDGQTYNNPCMLCHENLIRQTNTHIRSTGKC 60


>pdb|2ERW|A Chain A, Crystal Structure Of Infestin 4, A Factor Xiia Inhibitor
          Length = 56

 Score = 27.3 bits (59), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 70  PVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKCGKWILE 110
           PVCGS+G  Y + C    A+ +    L + + G+C +  +E
Sbjct: 14  PVCGSDGKTYGNPCMLNCAAQTKVPGLKLVHEGRCQRSNVE 54


>pdb|1BMO|A Chain A, Bm-40, FsEC DOMAIN PAIR
 pdb|1BMO|B Chain B, Bm-40, FsEC DOMAIN PAIR
          Length = 233

 Score = 26.9 bits (58), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 8/81 (9%)

Query: 30  PCQENTCQYGAKCIPSEDGTSY-KCECPQECPNYGDHTGSRPVCGSNGVDYKDLCEFQRA 88
           PCQ + C++G  C   E+ T    C+ P  CP          VC ++   +   C F   
Sbjct: 1   PCQNHHCKHGKVCELDENNTPMCVCQDPTSCP--APIGEFEKVCSNDNKTFDSSCHFFAT 58

Query: 89  SCSTK-----TNLTIKYYGKC 104
            C+ +       L + Y G C
Sbjct: 59  KCTLEGTKKGHKLHLDYIGPC 79


>pdb|3TJQ|A Chain A, N-Domain Of Htra1
          Length = 140

 Score = 26.9 bits (58), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 4/43 (9%)

Query: 68  SRPVCGSNGVDYKDLCEFQRASCST----KTNLTIKYYGKCGK 106
           S PVCGS+   Y +LC+ + AS  +    +  + +   G CG 
Sbjct: 97  SEPVCGSDANTYANLCQLRAASRRSERLHRPPVIVLQRGACGN 139


>pdb|1NUB|A Chain A, Helix C Deletion Mutant Of Bm-40 Fs-Ec Domain Pair
 pdb|1NUB|B Chain B, Helix C Deletion Mutant Of Bm-40 Fs-Ec Domain Pair
          Length = 229

 Score = 26.9 bits (58), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 8/81 (9%)

Query: 30  PCQENTCQYGAKCIPSEDGTSY-KCECPQECPNYGDHTGSRPVCGSNGVDYKDLCEFQRA 88
           PCQ + C++G  C   E+ T    C+ P  CP          VC ++   +   C F   
Sbjct: 5   PCQNHHCKHGKVCELDENNTPMCVCQDPTSCP--APIGEFEKVCSNDNKTFDSSCHFFAT 62

Query: 89  SCSTK-----TNLTIKYYGKC 104
            C+ +       L + Y G C
Sbjct: 63  KCTLEGTKKGHKLHLDYIGPC 83


>pdb|4D90|A Chain A, Crystal Structure Of Del-1 Egf Domains
 pdb|4D90|B Chain B, Crystal Structure Of Del-1 Egf Domains
          Length = 143

 Score = 26.6 bits (57), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 31 CQENTCQYGAKCIPSEDGTSYKCECPQ 57
          C  N C+ G  C+P     S+ CECP 
Sbjct: 3  CDPNPCENGGICLPGLADGSFSCECPD 29


>pdb|1Z7K|B Chain B, Crystal Structure Of Trypsin- Ovomucoid Turkey Egg White
           Inhibitor Complex
          Length = 62

 Score = 26.2 bits (56), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 12/36 (33%), Positives = 20/36 (55%)

Query: 69  RPVCGSNGVDYKDLCEFQRASCSTKTNLTIKYYGKC 104
            PVCG++GV Y + C     +    T++  K+ G+C
Sbjct: 27  NPVCGTDGVTYDNECVLCAHNLEQGTSVGKKHDGEC 62


>pdb|4DG6|A Chain A, Crystal Structure Of Domains 1 And 2 Of Lrp6
          Length = 616

 Score = 25.8 bits (55), Expect = 5.7,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 14/32 (43%)

Query: 25  PELTNPCQENTCQYGAKCIPSEDGTSYKCECP 56
           P  TNPC  +       C+ S     Y+C CP
Sbjct: 261 PNATNPCGIDNGGCSHLCLMSPVKPFYQCACP 292


>pdb|3S94|A Chain A, Crystal Structure Of Lrp6-E1e2
 pdb|3S94|B Chain B, Crystal Structure Of Lrp6-E1e2
          Length = 619

 Score = 25.8 bits (55), Expect = 5.7,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 14/32 (43%)

Query: 25  PELTNPCQENTCQYGAKCIPSEDGTSYKCECP 56
           P  TNPC  +       C+ S     Y+C CP
Sbjct: 269 PNATNPCGIDNGGCSHLCLMSPVKPFYQCACP 300


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.323    0.141    0.486 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,840,730
Number of Sequences: 62578
Number of extensions: 155747
Number of successful extensions: 344
Number of sequences better than 100.0: 88
Number of HSP's better than 100.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 269
Number of HSP's gapped (non-prelim): 101
length of query: 111
length of database: 14,973,337
effective HSP length: 75
effective length of query: 36
effective length of database: 10,279,987
effective search space: 370079532
effective search space used: 370079532
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 45 (21.9 bits)