RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11294
(111 letters)
>d1nuba3 g.68.1.1 (A:78-135) Domain of BM-40/SPARC/osteonectin
{Human (Homo sapiens) [TaxId: 9606]}
Length = 58
Score = 45.0 bits (106), Expect = 2e-08
Identities = 10/46 (21%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Query: 53 CECPQECPNYGDHTGSRPVCGSNGVDYKDLCEFQRASCSTKMLSRG 98
C+ P CP VC ++ + C F C+ + +G
Sbjct: 1 CQDPTSCPAPIGE--FEKVCSNDNKTFDSSCHFFATKCTLEGTKKG 44
>d1pcea_ g.68.1.1 (A:) PEC-60 peptide {Pig (Sus scrofa) [TaxId:
9823]}
Length = 60
Score = 39.2 bits (91), Expect = 4e-06
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 53 CECPQECPNYGDHTGSRPVCGSNGVDYKDLCEFQRASCSTKM 94
CE E P+ PVCG++GV Y+ C+ A K
Sbjct: 11 CEHMTESPDCSRI--YDPVCGTDGVTYESECKLCLARIENKQ 50
>d1tbrr2 g.68.1.1 (R:52-103) Blood-sucking insect-derived tryptase
inhibitor {Bug (Rhodnius prolixus), rhodniin [TaxId:
13249]}
Length = 52
Score = 37.5 bits (87), Expect = 1e-05
Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 5/43 (11%)
Query: 52 KCECPQECPNYGDHTGSRPVCGSNGVDYKDLCEFQRASCSTKM 94
+ C + + PVCGS+ + Y + C + AS S+
Sbjct: 3 EDVCQECDGDEYK-----PVCGSDDITYDNNCRLECASISSSP 40
>d1lr7a2 g.68.1.1 (A:89-136) Domain of follistatin {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 48
Score = 37.6 bits (87), Expect = 1e-05
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Query: 55 CPQECPNYGDHTGSRPVCGSNGVDYKDLCEFQRASCSTKM 94
C +C N PVCG +G Y++ C +A C +
Sbjct: 1 CAPDCSNITW---KGPVCGLDGKTYRNECALLKARCKEQP 37
>d1tgsi_ g.68.1.1 (I:) Secretory trypsin inhibitor {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 56
Score = 35.7 bits (82), Expect = 7e-05
Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 6/44 (13%)
Query: 52 KCECP-QECPNYGDHTGSRPVCGSNGVDYKDLCEFQRASCSTKM 94
C CP + PVCG++G+ Y + C + +
Sbjct: 8 TCTSEVSGCPKIYN-----PVCGTDGITYSNECVLCSENKKRQT 46
>d1hpta_ g.68.1.1 (A:) Secretory trypsin inhibitor {Human (Homo
sapiens) [TaxId: 9606]}
Length = 56
Score = 34.9 bits (80), Expect = 2e-04
Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 6/43 (13%)
Query: 52 KCECPQE-CPNYGDHTGSRPVCGSNGVDYKDLCEFQRASCSTK 93
KC C RPVCG++G Y + C + +
Sbjct: 8 KCYNELNGCTYE-----YRPVCGTDGDTYPNECVLCFENRKRQ 45
>d1z7kb1 g.68.1.1 (B:2-63) Ovomucoid domains {Turkey (Meleagris
gallopavo) [TaxId: 9103]}
Length = 62
Score = 34.5 bits (79), Expect = 2e-04
Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 5/52 (9%)
Query: 42 CIPSEDGTSYKCECPQECPNYGDHTGSRPVCGSNGVDYKDLCEFQRASCSTK 93
C + TS + + C PVCG++GV Y + C +
Sbjct: 5 CSRYPNTTSEEGKVMILCNKA-----LNPVCGTDGVTYDNECVLCAHNLEQG 51
>d2f3ci1 g.68.1.1 (I:5-50) Blood-sucking insect-derived tryptase
inhibitor {Triatoma infestans [TaxId: 30076]}
Length = 46
Score = 33.7 bits (77), Expect = 4e-04
Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 9/41 (21%)
Query: 53 CECPQECPNYGDHTGSRPVCGSNGVDYKDLCEFQRASCSTK 93
C CP+ VCGS+G Y + C A K
Sbjct: 2 CACPRVL---------HRVCGSDGNTYSNPCTLDCAKHEGK 33
>d2busa_ g.68.1.1 (A:) Seminal plasma inhibitor IIa {Cow (Bos
taurus) [TaxId: 9913]}
Length = 57
Score = 33.0 bits (75), Expect = 0.001
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 9/42 (21%)
Query: 52 KCECPQECPNYGDHTGSRPVCGSNGVDYKDLCEFQRASCSTK 93
K C +E S P CGSNG Y + C F +A +
Sbjct: 14 KVYCTRE---------SNPHCGSNGETYGNKCAFCKAVMKSG 46
>d1r0ri_ g.68.1.1 (I:) Ovomucoid domains {Turkey (Meleagris
gallopavo) [TaxId: 9103]}
Length = 51
Score = 31.8 bits (72), Expect = 0.002
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 57 QECPNYGDHTGSRPVCGSNGVDYKDLCEFQRASCSTK 93
E P RP+CGS+ Y + C F A +
Sbjct: 4 SEYPKPACTLEYRPLCGSDNKTYGNKCNFCNAVVESN 40
>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 53
Score = 30.6 bits (69), Expect = 0.006
Identities = 8/29 (27%), Positives = 10/29 (34%)
Query: 29 NPCQENTCQYGAKCIPSEDGTSYKCECPQ 57
+ C G C+ E SY C C
Sbjct: 7 PSSYDGYCLNGGVCMHIESLDSYTCNCVI 35
>d2erwa1 g.68.1.1 (A:4-56) Blood-sucking insect-derived tryptase
inhibitor {Triatoma infestans [TaxId: 30076]}
Length = 53
Score = 30.6 bits (69), Expect = 0.006
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 9/41 (21%)
Query: 53 CECPQECPNYGDHTGSRPVCGSNGVDYKDLCEFQRASCSTK 93
C C + PVCGS+G Y + C A+ +
Sbjct: 3 CACFRNY---------VPVCGSDGKTYGNPCMLNCAAQTKV 34
>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo
sapiens) [TaxId: 9606]}
Length = 48
Score = 29.8 bits (67), Expect = 0.010
Identities = 6/28 (21%), Positives = 9/28 (32%)
Query: 29 NPCQENTCQYGAKCIPSEDGTSYKCECP 56
+ C + C+ E Y C C
Sbjct: 5 PLSHDGYCLHDGVCMYIEALDKYACNCV 32
>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like
module {Mouse (Mus musculus) [TaxId: 10090]}
Length = 41
Score = 29.0 bits (65), Expect = 0.017
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 29 NPCQENTCQYGAKCIPSEDGTSYKCECPQ 57
NPC N CQ +C+ + YKC+C +
Sbjct: 2 NPCCSNPCQNRGECMSTGFD-QYKCDCTR 29
>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type),
t-PA {Human (Homo sapiens) [TaxId: 9606]}
Length = 41
Score = 28.7 bits (64), Expect = 0.021
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 31 CQENTCQYGAKCIPSEDGTSYKCECPQ 57
C E C G C + + + C+CP+
Sbjct: 1 CSEPRCFNGGTCQQALYFSDFVCQCPE 27
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 39
Score = 28.9 bits (65), Expect = 0.023
Identities = 9/29 (31%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Query: 28 TNPCQENTCQYGAKCIPSEDGTSYKCECP 56
+ C+ N C G C + Y+C CP
Sbjct: 3 GDQCESNPCLNGGSCKDDINS--YECWCP 29
>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 28.6 bits (64), Expect = 0.023
Identities = 7/29 (24%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Query: 28 TNPCQENTCQYGAKCIPSEDGTSYKCECP 56
T C +C +C+ + + Y C+C
Sbjct: 1 TAACTNTSCSGHGECVETINN--YTCKCD 27
>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 40
Score = 28.2 bits (63), Expect = 0.032
Identities = 8/29 (27%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Query: 28 TNPCQENTCQYGAKCIPSEDGTSYKCECP 56
T CQ+ +C +C+ + Y C C
Sbjct: 1 TASCQDMSCSKQGECLETIGN--YTCSCY 27
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog
protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 27.7 bits (62), Expect = 0.054
Identities = 9/28 (32%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
Query: 29 NPCQENTCQYGAKCIPSEDGTSYKCECP 56
N C N CQ A C+ ++C C
Sbjct: 2 NECVSNPCQNDATCLDQIGE--FQCICM 27
>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human
(Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 27.7 bits (62), Expect = 0.056
Identities = 8/28 (28%), Positives = 11/28 (39%), Gaps = 2/28 (7%)
Query: 29 NPCQENTCQYGAKCIPSEDGTSYKCECP 56
+ C+ + CQ KC Y C C
Sbjct: 1 DQCETSPCQNQGKCKDGLGE--YTCTCL 26
>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like
module {Sheep (Ovis aries) [TaxId: 9940]}
Length = 42
Score = 27.5 bits (61), Expect = 0.078
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 29 NPCQENTCQYGAKCIPSEDGTSYKCECPQE 58
NPC CQ+ C+ Y+C+C +
Sbjct: 3 NPCCYYPCQHQGICVRFGLD-RYQCDCTRT 31
>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 37
Score = 27.0 bits (60), Expect = 0.096
Identities = 8/28 (28%), Positives = 10/28 (35%), Gaps = 2/28 (7%)
Query: 29 NPCQENTCQYGAKCIPSEDGTSYKCECP 56
+ C + CQ G C Y C C
Sbjct: 3 DQCASSPCQNGGSCKDQLQS--YICFCL 28
>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog
protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 35
Score = 26.6 bits (59), Expect = 0.12
Identities = 7/28 (25%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 29 NPCQENTCQYGAKCIPSEDGTSYKCECP 56
+ C + C + +C+ + ++CECP
Sbjct: 1 DECASSPCLHNGRCLDKINE--FQCECP 26
>d1h0za_ g.68.1.2 (A:) Serine proteinase inhibitor lekti {Human
(Homo sapiens) [TaxId: 9606]}
Length = 68
Score = 27.6 bits (61), Expect = 0.13
Identities = 7/42 (16%), Positives = 14/42 (33%), Gaps = 9/42 (21%)
Query: 52 KCECPQECPNYGDHTGSRPVCGSNGVDYKDLCEFQRASCSTK 93
K C +E + P+ G +G + + C +
Sbjct: 23 KLACTRE---------NDPIQGPDGKVHGNTCSMCEVFFQAE 55
>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 63
Score = 24.2 bits (52), Expect = 1.8
Identities = 7/32 (21%), Positives = 13/32 (40%), Gaps = 3/32 (9%)
Query: 29 NPCQENTCQYGAKCIPSED---GTSYKCECPQ 57
++ C G +C +D + Y C+C
Sbjct: 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQP 38
>d1ep3a_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Lactococcus
lactis, isozyme B [TaxId: 1358]}
Length = 311
Score = 25.0 bits (53), Expect = 2.8
Identities = 11/104 (10%), Positives = 21/104 (20%), Gaps = 2/104 (1%)
Query: 4 SFYCYQIFLILDFLYACYIFPPELTNPCQENTCQYGAKCIPSEDGTSYKCECPQECPNYG 63
D L + S G + K +
Sbjct: 180 PIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLS--GPAIKPVALKLIHQVA 237
Query: 64 DHTGSRPVCGSNGVDYKDLCEFQRASCSTKMLSRGFLLDIWIPP 107
+ + +D+ E A S + D ++ P
Sbjct: 238 QDVDIPIIGMGGVANAQDVLEMYMAGASAVAVGTANFADPFVCP 281
>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin
IIa) {Human (Homo sapiens) [TaxId: 9606]}
Length = 48
Score = 22.8 bits (49), Expect = 3.6
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 5/37 (13%)
Query: 20 CYIFPPELTNPCQENTCQYGAKCIPSEDGTSYKCECP 56
C + P E +PC C +G + S+ C+C
Sbjct: 2 CLVLPLE--HPCASLCCGHGTCI---DGIGSFSCDCR 33
>d1kqfb1 d.58.1.5 (B:2-245) Formate dehydrogenase N, iron-sulfur
(beta) subunit {Escherichia coli [TaxId: 562]}
Length = 244
Score = 24.0 bits (51), Expect = 4.7
Identities = 8/47 (17%), Positives = 15/47 (31%)
Query: 36 CQYGAKCIPSEDGTSYKCECPQECPNYGDHTGSRPVCGSNGVDYKDL 82
C + + ED YKC + + G C + + +
Sbjct: 142 CPFNIPRLNKEDNRVYKCTLCVDRVSVGQEPACVKTCPTGAIHFGTK 188
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog
protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 42
Score = 22.4 bits (48), Expect = 5.5
Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 4/30 (13%)
Query: 29 NPCQE--NTCQYGAKCIPSEDGTSYKCECP 56
+ C N C++ KCI + S++C+C
Sbjct: 4 DECSLGANPCEHAGKCINTLG--SFECQCL 31
>d1hdla_ g.68.1.2 (A:) Serine proteinase inhibitor lekti {Human
(Homo sapiens) [TaxId: 9606]}
Length = 55
Score = 22.1 bits (47), Expect = 8.0
Identities = 2/18 (11%), Positives = 7/18 (38%)
Query: 68 SRPVCGSNGVDYKDLCEF 85
+ +G+ + + C
Sbjct: 26 KKFFQSLDGIMFINKCAT 43
>d1wida_ b.142.1.2 (A:) DNA-binding protein RAV1 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 117
Score = 23.0 bits (49), Expect = 8.3
Identities = 7/48 (14%), Positives = 15/48 (31%)
Query: 52 KCECPQECPNYGDHTGSRPVCGSNGVDYKDLCEFQRASCSTKMLSRGF 99
+ +Y G + D+ F R++ + L G+
Sbjct: 60 RYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIGW 107
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.324 0.141 0.491
Gapped
Lambda K H
0.267 0.0423 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 461,621
Number of extensions: 20754
Number of successful extensions: 129
Number of sequences better than 10.0: 1
Number of HSP's gapped: 118
Number of HSP's successfully gapped: 72
Length of query: 111
Length of database: 2,407,596
Length adjustment: 70
Effective length of query: 41
Effective length of database: 1,446,496
Effective search space: 59306336
Effective search space used: 59306336
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 47 (22.7 bits)