BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11297
(132 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P31696|AGRIN_CHICK Agrin OS=Gallus gallus GN=AGRN PE=1 SV=3
Length = 2081
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 58/101 (57%), Gaps = 8/101 (7%)
Query: 33 PCLSHPCQNGATCQDEEDGL-FECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSHIVMKTL 91
PC SHPC +G TC+D DG F C C G +C P Y P+F G S++ K +
Sbjct: 1350 PCDSHPCLHGGTCED--DGREFTCRCPAGKGGAVCEK---PIRYFIPSFGGKSYLAFKMM 1404
Query: 92 KAYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132
KAY+ + I +EF+ + G+LLYN QN DF+SLA+V
Sbjct: 1405 KAYHTVRIAMEFRATELSGLLLYNGQNRG--KDFISLALVG 1443
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
Query: 21 SQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCH--TRAPPKLYDTP 78
S P E +PC PC ATC +G C C G C T + P
Sbjct: 1594 SYTGPTCADERNPCDPTPCHISATCLVLPEGGAMCACPMGREGEFCERVTEQDHTMPFLP 1653
Query: 79 AFNGSSHIVMKTLKAY----NKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAI 130
FNG S++ + L+ ++S+E+ F G++ YN Q DG GDFVSLA+
Sbjct: 1654 EFNGFSYLELNGLQTLFLTCRQMSMEVVFLAKSPSGMIFYNGQKTDGKGDFVSLAL 1709
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 31/129 (24%)
Query: 33 PCLS--HPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKL---YDTPAFNGSSHI- 86
PC +PCQNG TC + +EC C F+G C K + AF+G +++
Sbjct: 1835 PCTQKPNPCQNGGTCSPRLES-YECACQRGFSGAHCEKVIIEKAAGDAEAIAFDGRTYME 1893
Query: 87 ----VMKTL-------------------KAYNKLSIEIEFKTNKNDGILLYNQQNLDGTG 123
V K+ KA E+ KT G++L++ + L+ +
Sbjct: 1894 YHNAVTKSHLSNEIPAPDALDYPAEPSEKALQSNHFELSIKTEATQGLILWSGKGLERS- 1952
Query: 124 DFVSLAIVN 132
D+++LAIV+
Sbjct: 1953 DYIALAIVD 1961
>sp|P25304|AGRIN_RAT Agrin OS=Rattus norvegicus GN=Agrn PE=1 SV=2
Length = 1959
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 6/110 (5%)
Query: 24 SPNLRLEESPCLSHPCQNGATCQDEEDGL-FECLCSPEFTGYLCHTRAPPKLYDTPAFNG 82
+P + C S PC +G TCQD++ G F C C+ G +C PP + PAF G
Sbjct: 1214 TPGHQQPSKSCDSQPCLHGGTCQDQDSGKGFTCSCTAGRGGSVCEKVQPPSM---PAFKG 1270
Query: 83 SSHIVMKTLKAYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132
S + TL+AY+ L + +EF+ + +G+LLYN N G DF++LA+++
Sbjct: 1271 HSFLAFPTLRAYHTLRLALEFRALETEGLLLYN-GNARGK-DFLALALLD 1318
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 59/119 (49%), Gaps = 13/119 (10%)
Query: 24 SPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHT-----RAPPKLYDTP 78
P E+SPC +PC A C+ G +C C +G C T + P L D
Sbjct: 1473 GPTCADEKSPCQPNPCHGAAPCRVLSSGGAKCECPLGRSGTFCQTVLETAGSRPFLAD-- 1530
Query: 79 AFNGSSHIVMKTLKAYN-----KLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132
FNG S++ +K L + K+++E+ F G+LLYN Q DG GDFVSLA+ N
Sbjct: 1531 -FNGFSYLELKGLHTFERDLGEKMALEMVFLARGPSGLLLYNGQKTDGKGDFVSLALHN 1588
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 35/146 (23%)
Query: 17 VVQSSQASPNLRLEESPC---LSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPK 73
V+++ SP + PC L +PC NG +C E +ECLC F+G C K
Sbjct: 1699 VLRAVDVSP---FADHPCTQALGNPCLNGGSCVPRE-ATYECLCPGGFSGLHCEKGLVEK 1754
Query: 74 LY---DTPAFNGSSHI------------------------VMKTLKAYNKLSIEIEFKTN 106
+T AF+G ++I + + KA E+ +T
Sbjct: 1755 SVGDLETLAFDGRTYIEYLNAVIESELTNEIPAPETLDSRALFSEKALQSNHFELSLRTE 1814
Query: 107 KNDGILLYNQQNLDGTGDFVSLAIVN 132
G++L+ + + D+++LAIV+
Sbjct: 1815 ATQGLVLWIGKAAE-RADYMALAIVD 1839
>sp|O00468|AGRIN_HUMAN Agrin OS=Homo sapiens GN=AGRN PE=1 SV=5
Length = 2067
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 59/120 (49%), Gaps = 13/120 (10%)
Query: 21 SQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAP-----PKLY 75
+ P E+SPC +PC A C+ +G +C C G C T + P L
Sbjct: 1579 GRVGPTCADEKSPCQPNPCHGAAPCRVLPEGGAQCECPLGREGTFCQTASGQDGSGPFLA 1638
Query: 76 DTPAFNGSSHIVMKTLKAY-----NKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAI 130
D FNG SH+ ++ L + K+++E+ F G+LLYN Q DG GDFVSLA+
Sbjct: 1639 D---FNGFSHLELRGLHTFARDLGEKMALEVVFLARGPSGLLLYNGQKTDGKGDFVSLAL 1695
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 34 CLSHPCQNGATCQDEE-DGLFECLCSPEFTGYLCHT--RAPPKLYDTPAFNGSSHIVMKT 90
C S PC +G TCQD G F C C G +C AP PAF G S + T
Sbjct: 1333 CDSQPCFHGGTCQDWALGGGFTCSCPAGRGGAVCEKVLGAP-----VPAFEGRSFLAFPT 1387
Query: 91 LKAYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132
L+AY+ L + +EF+ + G+LLYN N G DF++LA+++
Sbjct: 1388 LRAYHTLRLALEFRALEPQGLLLYN-GNARGK-DFLALALLD 1427
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 28/123 (22%)
Query: 36 SHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKL---YDTPAFNGSSHI------ 86
HPC NGA+C E + CLC F+G C K DT AF+G + +
Sbjct: 1827 GHPCLNGASCVPRE-AAYVCLCPGGFSGPHCEKGLVEKSAGDVDTLAFDGRTFVEYLNAV 1885
Query: 87 ----------VMKTL-------KAYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLA 129
V +TL KA E+ +T G++L++ + + D+V+LA
Sbjct: 1886 TESELANEIPVPETLDSGALHEKALQSNHFELSLRTEATQGLVLWSGKATE-RADYVALA 1944
Query: 130 IVN 132
IV+
Sbjct: 1945 IVD 1947
>sp|A2ASQ1|AGRIN_MOUSE Agrin OS=Mus musculus GN=Agrn PE=1 SV=1
Length = 1950
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
Query: 24 SPNLRLEESPCLSHPCQNGATCQDEEDGL-FECLCSPEFTGYLCHTRAPPKLYDTPAFNG 82
+P + C S PC +G TCQD + G F C C+ G +C +L PAF G
Sbjct: 1205 TPGPQRPPKSCDSQPCLHGGTCQDLDSGKGFSCSCTAGRAGTVCEKV---QLPSVPAFKG 1261
Query: 83 SSHIVMKTLKAYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132
S + TL+AY+ L + +EF+ + +G+LLYN N G DF++LA+++
Sbjct: 1262 HSFLAFPTLRAYHTLRLALEFRALETEGLLLYN-GNARGK-DFLALALLD 1309
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 24 SPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHT-----RAPPKLYDTP 78
P E++PC +PC A C G +C C +G C T + P L D
Sbjct: 1464 GPTCADEKNPCQPNPCHGSAPCHVLSRGGAKCACPLGRSGSFCETVLENAGSRPFLAD-- 1521
Query: 79 AFNGSSHIVMKTLKAYN-----KLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132
FNG S++ +K L + K+++E+ F G+LLYN Q DG GDFVSLA+ N
Sbjct: 1522 -FNGFSYLELKGLHTFERDLGEKMALEMVFLARGPSGLLLYNGQKTDGKGDFVSLALHN 1579
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 29/125 (23%)
Query: 35 LSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLY---DTPAFNGSSHI----- 86
+ +PC NG +C E +ECLC F+G C K +T AF+G ++I
Sbjct: 1708 VDNPCLNGGSCIPRE-ATYECLCPGGFSGLHCEKGIVEKSVGDLETLAFDGRTYIEYLNA 1766
Query: 87 -------------------VMKTLKAYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVS 127
+ + KA E+ +T G++L+ + + D+++
Sbjct: 1767 VTESELTNEIPAPETLDSRALFSEKALQSNHFELSLRTEATQGLVLWIGK-VGERADYMA 1825
Query: 128 LAIVN 132
LAIV+
Sbjct: 1826 LAIVD 1830
>sp|Q90404|AGRIN_DIPOM Agrin (Fragment) OS=Diplobatis ommata GN=AGRN PE=2 SV=1
Length = 1328
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 23 ASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYD-----T 77
+ P + +PC +PC A C +G +C C G LC R D
Sbjct: 858 SGPTCADKHNPCDPNPCHQSANCMVLPEGGSKCECPMGREGELCE-RVSEAEQDQGKAFI 916
Query: 78 PAFNGSSHIVMKTLKAY-----NKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAI 130
P FNG S++ M + + KLS+E+ F +G++ YN Q DG GDFVSL +
Sbjct: 917 PEFNGLSYLEMNGIHTFVSDLLQKLSMEVIFLAKDPNGMIFYNGQKTDGRGDFVSLNL 974
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 33 PCLSHPCQNGATCQDEEDGL-FECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSHIVMKTL 91
PC S PC +G TC+D DG+ + C C G +C +Y P F G S++ KT+
Sbjct: 611 PCDSQPCLHGGTCED--DGVSYTCSCPAGRGGAVCERTI---VYFIPEFGGRSYLAFKTM 665
Query: 92 KAYNKLSIEIEFKTNKNDGILL 113
KAY + I +EF+ + DG+ L
Sbjct: 666 KAYYTVRISMEFRASNLDGLPL 687
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Query: 7 MKRMGCLSASVVQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
+K + L ++++ N R +PCQNG C ++C+C F+G C
Sbjct: 1076 LKSIPLLKKENIRNAMEISNFRWHACTKTRNPCQNGGVCSPRLR-EYDCMCQRGFSGPQC 1134
Query: 67 HTRAPPKLY---DTPAFNGSSHI-----VMKTLKAYNKLSIEIEFKTNKNDGILLYNQQN 118
K ++ AFNG + I V ++ KA E+ KT G++L++ +
Sbjct: 1135 EKALEEKSASGSESVAFNGRTFIEYHNTVTRSEKAVQVNYFEMSIKTEATKGLILWSGKI 1194
Query: 119 LDGTGDFVSLAIVN 132
+ + D+++LA+V+
Sbjct: 1195 AEKS-DYIALAVVD 1207
>sp|Q05793|PGBM_MOUSE Basement membrane-specific heparan sulfate proteoglycan core protein
OS=Mus musculus GN=Hspg2 PE=1 SV=1
Length = 3707
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 39/138 (28%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAP----PKLY-------------- 75
C PCQNG CQD E + C+C FT + R P P L+
Sbjct: 3166 CQDRPCQNGGQCQDSESSSYTCVCPAGFTAAAVNIRKPCTATPSLWADATCVNRPDGRGY 3225
Query: 76 -------------------DTPAFNGS-SHIVMKTL-KAYNKLSIEIEFKTNKNDGILLY 114
TP+ +G+ S++ + L +++L +++EFK + +GILL+
Sbjct: 3226 TCRCHLGRSGVRCEEGVTVTTPSMSGAGSYLALPALTNTHHELRLDVEFKPLEPNGILLF 3285
Query: 115 NQQNLDGTGDFVSLAIVN 132
+ DFVSLA+V
Sbjct: 3286 SGGKSGPVEDFVSLAMVG 3303
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 30 EESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC-HTRAPPKLYDTPAFNGSS 84
+ SPC PC+NGATC + F+CLC F G LC H P +L++ P NG +
Sbjct: 3421 DSSPCERQPCRNGATCMPAGEYEFQCLCQDGFKGDLCEHEENPCQLHE-PCLNGGT 3475
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 11/71 (15%)
Query: 69 RAPPKLYDTPAFNGSSHIVMKTLK-AYNKLSIEIEFKTNKNDGILLYNQQNLDGTG---- 123
R P TP S + + T+K AY K I+I F+ + DG+LLYN Q T
Sbjct: 2982 RVIPYFTQTPY----SFLPLPTIKDAYRKFEIKITFRPDSADGMLLYNGQKRSPTNLANR 3037
Query: 124 --DFVSLAIVN 132
DF+S +V
Sbjct: 3038 QPDFISFGLVG 3048
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 32/127 (25%)
Query: 30 EESPCLSH-PCQNGATCQDEEDGLFECLCSPEFTGYLCH-------------------TR 69
EE+PC H PC NG TC+ CLC P F+G C
Sbjct: 3460 EENPCQLHEPCLNGGTCRGA-----RCLCLPGFSGPRCQQGAGYGVVESDWHPEGSGGND 3514
Query: 70 APPK----LYDTPAFNGSSHIVMKTLKAYNKLSIEIEFKTNKNDGILLYNQ--QNLDGTG 123
AP + YD + ++L + +IE E +T+ DG+LL+ + +
Sbjct: 3515 APGQYGAYFYDNGFLGLPGNSFSRSLPEVPE-TIEFEVRTSTADGLLLWQGVVREASRSK 3573
Query: 124 DFVSLAI 130
DF+SL +
Sbjct: 3574 DFISLGL 3580
>sp|Q63HQ2|EGFLA_HUMAN Pikachurin OS=Homo sapiens GN=EGFLAM PE=1 SV=2
Length = 1017
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 28 RLEESPCLSHPCQNGATC-QDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSHI 86
RL + PC C + C D G C C+ G C + P F G S++
Sbjct: 341 RLFDMPCDETLCSADSFCVNDYTWGGSRCQCTLGKGGESCSEDI---VIQYPQFFGHSYV 397
Query: 87 VMKTLK-AYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIV 131
+ LK +Y I +EF+ DG+LLY +N G GDF+SLAI+
Sbjct: 398 TFEPLKNSYQAFQITLEFRAEAEDGLLLYCGENEHGRGDFMSLAII 443
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 14/118 (11%)
Query: 26 NLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDT-------P 78
N+ PC+ PC +G +C+ ++G ++C C F G C +T P
Sbjct: 780 NVENAAHPCVRAPCAHGGSCRPRKEG-YDCDCPLGFEGLHCQKECGNYCLNTIIEAIEIP 838
Query: 79 AFNGSSHIVMKTLKAYNKLS-----IEIEFKTNKNDGILLYNQQN-LDGTGDFVSLAI 130
F G S++ ++S + + FKT DG+LL+ + + DF+SL +
Sbjct: 839 QFIGRSYLTYDNPDILKRVSGSRSNVFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGL 896
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCH---TRAPPKLYDTPAFNGSSHIVMKT 90
C C +G TC + + CLC F G C T P+ ++ ++ ++
Sbjct: 569 CDEASCIHGGTCTAIKADSYICLCPLGFKGRHCEDAFTLTIPQFRESLRSYAATPWPLEP 628
Query: 91 LKAYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132
+ + EI F+ + DG+LLY+ G+ DF+S+ +
Sbjct: 629 QHYLSFMEFEITFRPDSGDGVLLYSYDT--GSKDFLSINLAG 668
>sp|P98160|PGBM_HUMAN Basement membrane-specific heparan sulfate proteoglycan core protein
OS=Homo sapiens GN=HSPG2 PE=1 SV=4
Length = 4391
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 59/139 (42%), Gaps = 40/139 (28%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC-HTRA---PPK---------------- 73
C PCQNG C D E + C+C FTG C H++A P+
Sbjct: 3848 CRDRPCQNGGQCHDSESSSYVCVCPAGFTGSRCEHSQALHCHPEACGPDATCVNRPDGRG 3907
Query: 74 ------------------LYDTPAFNGS-SHIVMKTL-KAYNKLSIEIEFKTNKNDGILL 113
TP+ +G+ S++ + L +++L +++EFK DG+LL
Sbjct: 3908 YTCRCHLGRSGLRCEEGVTVTTPSLSGAGSYLALPALTNTHHELRLDVEFKPLAPDGVLL 3967
Query: 114 YNQQNLDGTGDFVSLAIVN 132
++ DFVSLA+V
Sbjct: 3968 FSGGKSGPVEDFVSLAMVG 3986
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 33/128 (25%)
Query: 30 EESPC-LSHPCQNGATCQDEEDGLFECLCSPEFTGYLC-----HTRAPPKLY-------D 76
EE+PC L PC +G TCQ CLC P F+G C H A + D
Sbjct: 4143 EENPCQLREPCLHGGTCQGT-----RCLCLPGFSGPRCQQGSGHGIAESDWHLEGSGGND 4197
Query: 77 TPAFNGS-----------SHIVMKTLKAYNKLSIEIEFKTNKNDGILLYNQQNLDGTG-- 123
P G+ H+ ++L + +IE+E +T+ G+LL+ + G
Sbjct: 4198 APGQYGAYFHDDGFLAFPGHVFSRSLPEVPE-TIELEVRTSTASGLLLWQGVEVGEAGQG 4256
Query: 124 -DFVSLAI 130
DF+SL +
Sbjct: 4257 KDFISLGL 4264
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 27/55 (49%)
Query: 30 EESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSS 84
+ SPC PCQ+GATC + F+CLC F G LC P P +G +
Sbjct: 4104 DSSPCERQPCQHGATCMPAGEYEFQCLCRDGFKGDLCEHEENPCQLREPCLHGGT 4158
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 14/74 (18%)
Query: 69 RAPPKLYDTPAFNGSSHIVMKTLK-AYNKLSIEIEFKTNKNDGILLYN-QQNLDGT---- 122
R P TP S + + T+K AY K I+I F+ + DG+LLYN Q+ + G+
Sbjct: 3661 RVVPYFTQTPY----SFLPLPTIKDAYRKFEIKITFRPDSADGMLLYNGQKRVPGSPTNL 3716
Query: 123 ----GDFVSLAIVN 132
DF+S +V
Sbjct: 3717 ANRQPDFISFGLVG 3730
>sp|Q9NYQ7|CELR3_HUMAN Cadherin EGF LAG seven-pass G-type receptor 3 OS=Homo sapiens
GN=CELSR3 PE=1 SV=2
Length = 3312
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 27 LRLEESPCLSHPCQNGATCQDEEDGLFECLCSP--EFTGYLCHTRAPPKLYDTPAFNGSS 84
L E C+ C+NG TC D +G F C C F G C A +F SS
Sbjct: 1472 LDTEAGRCVPGVCRNGGTCTDAPNGGFRCQCPAGGAFEGPRCEVAA-------RSFPPSS 1524
Query: 85 HIVMKTLKAYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIV 131
++ + L+ L++ + F T + G+L YN + L+ DF++L +V
Sbjct: 1525 FVMFRGLRQRFHLTLSLSFATVQQSGLLFYNGR-LNEKHDFLALELV 1570
>sp|A3KN33|EGFLA_BOVIN Pikachurin OS=Bos taurus GN=EGFLAM PE=2 SV=1
Length = 1018
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 28 RLEESPCLSHPCQNGATC-QDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSHI 86
RL ++ C C + C D G C C+ G C + P F G S++
Sbjct: 350 RLFDTSCDETVCSADSFCVSDYTWGGSRCHCNLGKGGESCSEDI---VIQYPQFFGHSYV 406
Query: 87 VMKTLK-AYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132
+ LK +Y I +EF+ DG+LLY +N G GDF+SLA++
Sbjct: 407 TFEPLKNSYQAFQITLEFRAEAEDGLLLYCGENEHGRGDFMSLAVIR 453
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Query: 26 NLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSH 85
N+ PC+ PC +G +C+ ++G +EC C F G C +A + + P F G S+
Sbjct: 789 NVENAAHPCVGSPCAHGGSCRPRKEG-YECDCPLGFEGLHCQ-KAITEAIEIPQFIGRSY 846
Query: 86 IVMKTLKAYNKLSIE-----IEFKTNKNDGILLYNQQN-LDGTGDFVSLAI 130
+ ++S + FKT DG+LL+ + + DF+SL +
Sbjct: 847 LTYDNPDILKRVSGSRSNAFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGL 897
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCH---TRAPPKLYDTPAFNGSSHIVMKT 90
C C NG TC + + CLC F G C T P+ ++ ++ ++
Sbjct: 578 CDEASCINGGTCMASKADSYICLCPLGFRGRHCEDAFTLTIPQFKESLRSYAATPWPLEP 637
Query: 91 LKAYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSL 128
+ + E+ F+ + DG+LLY+ G+ DF+S+
Sbjct: 638 RHYLSFMEFEVTFRPDSEDGVLLYSYDT--GSKDFLSI 673
>sp|Q9V5N8|STAN_DROME Protocadherin-like wing polarity protein stan OS=Drosophila
melanogaster GN=stan PE=1 SV=4
Length = 3579
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 32/127 (25%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHT------------------------- 68
C S PCQNG TC E G + C+C TG C T
Sbjct: 1486 CYSDPCQNGGTCVRREGG-YTCVCPSTHTGQNCETGVGHLRPCPSETCEGGLSCLSNYPS 1544
Query: 69 RAPPKLYDT-----PAFNGSSHIVMKTLKAYNKLSIEIEFKTNKNDGILLYNQQNLDGTG 123
PP T AF +S + ++LK ++ ++++ F T + +G+LLYN + +
Sbjct: 1545 SQPPPYTATCELRARAFGRNSFLTFESLKQRHRFNLKLRFATVQENGLLLYNGR-YNELH 1603
Query: 124 DFVSLAI 130
DF++L I
Sbjct: 1604 DFIALEI 1610
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 7/85 (8%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSHIVMKTLKA 93
C S PC NG TC+ E G + C C + G C P F+G + L
Sbjct: 1760 CQSEPCFNGGTCR-EGWGTYSCECPEGYAGNSCQDNIPAPW----RFSGDGSLSFNPLLR 1814
Query: 94 YNKLSIEIEF--KTNKNDGILLYNQ 116
+L F +T + + LL Q
Sbjct: 1815 PIQLPWTTSFSLRTRQKEAFLLQIQ 1839
>sp|B4F785|EGFLA_RAT Pikachurin OS=Rattus norvegicus GN=Egflam PE=2 SV=1
Length = 1005
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Query: 26 NLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSH 85
N+ PC+ PC +G +C+ ++G +EC C F G C +A + + P F G S+
Sbjct: 776 NVENAAHPCVGAPCAHGGSCRPRKEG-YECDCPLGFEGLNCQ-KAITEAIEIPQFIGRSY 833
Query: 86 IVMKTLKAYNKLSIE-----IEFKTNKNDGILLYNQQN-LDGTGDFVSLAI 130
+ ++S + FKT DG+LL+ + + DF+SL +
Sbjct: 834 LTYDNPNILKRVSGSRSNAFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGL 884
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 58/132 (43%), Gaps = 13/132 (9%)
Query: 2 VPLVRMKRMGCLSASVVQSSQASPNLRLEESPCLSHPCQNGATC-QDEEDGLFECLCSPE 60
VP +R G S +V+ RL + C C + C D G C C+
Sbjct: 319 VPPTPAQRKGKNSVAVMS--------RLFDMSCDETLCSADSFCVNDYAWGGSRCHCNLG 370
Query: 61 FTGYLCHTRAPPKLYDTPAFNGSSHIVMKTLK-AYNKLSIEIEFKTNKNDGILLYNQQNL 119
G C + P F G S++ + LK +Y I +EF+ DG+LLY ++
Sbjct: 371 KGGEAC---SEDIFIQYPQFFGHSYVTFEPLKNSYQAFQITLEFRAEAEDGLLLYCGESE 427
Query: 120 DGTGDFVSLAIV 131
G GDF+SLA++
Sbjct: 428 HGRGDFMSLALI 439
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCH---TRAPPKLYDTPAFNGSSHIVMKT 90
C C NG TC + + CLC F G C T P+ ++ ++ ++
Sbjct: 565 CDEASCINGGTCAAIKADSYICLCPLGFRGRHCEDAFTLTIPQFRESLRSYAATPWPLEP 624
Query: 91 LKAYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIV 131
+ EI F+ + DG+LLY+ + DF+S+ +
Sbjct: 625 QHYLSFTEFEITFRPDSGDGVLLYSYDT--SSKDFLSIIMA 663
>sp|Q9NR61|DLL4_HUMAN Delta-like protein 4 OS=Homo sapiens GN=DLL4 PE=1 SV=1
Length = 685
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 26 NLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSS 84
+ LE S C S+PC+NG +C+D+EDG + CLC P + G C + D+P FNG S
Sbjct: 320 DCELELSECDSNPCRNGGSCKDQEDG-YHCLCPPGYYGLHCE-HSTLSCADSPCFNGGS 376
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 29 LEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAP-PKLYDTPAFN 81
L S C +PC +G TC D E+GL C C F+G C R +P FN
Sbjct: 439 LHVSDCARNPCAHGGTCHDLENGLM-CTCPAGFSGRRCEVRTSIDACASSPCFN 491
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 34 CLSHPCQNGATCQDEEDGL-FECLCSPEFTGYLCHTRAPPKLYDTPAFNG 82
C PC NG +C++ G + C C P FTG C + + P NG
Sbjct: 366 CADSPCFNGGSCRERNQGANYACECPPNFTGSNCEKKV-DRCTSNPCANG 414
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSHIVMKTL 91
C S+PC NG C + C C P FTG C + A G+ H + L
Sbjct: 406 CTSNPCANGGQCLNRGPSRM-CRCRPGFTGTYCELHVSDCARNPCAHGGTCHDLENGL 462
>sp|O75093|SLIT1_HUMAN Slit homolog 1 protein OS=Homo sapiens GN=SLIT1 PE=2 SV=4
Length = 1534
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Query: 12 CLSASVVQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAP 71
C Q + P+L +SPC CQNGA C D+ + C C P F G C
Sbjct: 1109 CAEGYSGQLCEIPPHLPAPKSPCEGTECQNGANCVDQGNRPV-CQCLPGFGGPECE---- 1163
Query: 72 PKLYDTPAFNGSSHIVMKTLKAYNKLSIEIEFKTNKNDGILLYNQQN 118
KL + +++ L+ + + +I ++ T +++GILLYN N
Sbjct: 1164 -KLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDNGILLYNGDN 1209
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 34 CLSHPCQNGATC--QDEEDGLFECLCSPEFTGYLC 66
C S PC+NG TC Q+ ED F C C F G C
Sbjct: 968 CSSGPCENGGTCHAQEGEDAPFTCSCPTGFEGPTC 1002
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHT 68
CLS PCQN TC ++ ++ C C + G C
Sbjct: 929 CLSSPCQNQGTCHNDPLEVYRCACPSGYKGRDCEV 963
>sp|Q9NYQ6|CELR1_HUMAN Cadherin EGF LAG seven-pass G-type receptor 1 OS=Homo sapiens
GN=CELSR1 PE=1 SV=1
Length = 3014
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSP-EFTGYLCHTRAPPKLYDTPAFNGSSHIVMKTLK 92
C + C+NG TC + G F C+C P E+ C T +F S + + L+
Sbjct: 1407 CANGVCKNGGTCVNLLIGGFHCVCPPGEYERPYCEV-------TTRSFPPQSFVTFRGLR 1459
Query: 93 AYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132
+I + F T + +G+LLYN + + DF++L IV+
Sbjct: 1460 QRFHFTISLTFATQERNGLLLYNGR-FNEKHDFIALEIVD 1498
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAP-PKLYDTPAFNGSSHIVMKTLK 92
C CQNG TC + + ++ C C F G C P P+L F+G S + L
Sbjct: 1653 CDGRRCQNGGTCVNRWN-MYLCECPLRFGGKNCEQAMPHPQL-----FSGESVVSWSDLN 1706
Query: 93 AYNKLS--IEIEFKTNKNDGILL 113
+ + + F+T K D +L+
Sbjct: 1707 IIISVPWYLGLMFRTRKEDSVLM 1729
>sp|O88278|CELR3_RAT Cadherin EGF LAG seven-pass G-type receptor 3 OS=Rattus norvegicus
GN=Celsr3 PE=2 SV=1
Length = 3313
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 27 LRLEESPCLSHPCQNGATCQDEEDGLFECLCSP--EFTGYLCHTRAPPKLYDTPAFNGSS 84
L E C+ C+NG TC + +G F C C F G C A +F SS
Sbjct: 1463 LDTEAGRCVPGVCRNGGTCTNAPNGGFRCQCPAGGAFEGPRCEVAA-------RSFPPSS 1515
Query: 85 HIVMKTLKAYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIV 131
++ + L+ L++ + F T + G+L YN + L+ DF++L +V
Sbjct: 1516 FVMFRGLRQRFHLTLSLSFATVQPSGLLFYNGR-LNEKHDFLALELV 1561
Score = 32.3 bits (72), Expect = 0.84, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 13/82 (15%)
Query: 3 PLVRMKRMGCLS-----------ASVVQSSQASPNLRLEESPCLSHPCQNGATCQDEEDG 51
P+ R +GC+ A+ V ++ + + + C S PC+NG C + G
Sbjct: 1675 PVSRKDFIGCMRDLHIDGRRVDMAAFVANNGTTAGCQAKSHFCASGPCKNGGLCSERWGG 1734
Query: 52 LFECLCSPEFTGYLCH-TRAPP 72
F C C F G C T A P
Sbjct: 1735 -FSCDCPVGFGGKDCRLTMAHP 1755
Score = 30.0 bits (66), Expect = 4.9, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 34 CLSHPCQNGATCQDEEDGL--FECLCSPEFTGYLCHTR 69
CL +PCQN +C+ + G + C C+ + G C R
Sbjct: 1976 CLLNPCQNQGSCRHLQGGPHGYTCDCASGYFGQHCEHR 2013
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 32 SPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
+PC S PC A C+D F C C P + G C
Sbjct: 1939 NPCASGPCPPHANCKDLWQ-TFSCTCWPGYYGPGC 1972
>sp|Q91ZI0|CELR3_MOUSE Cadherin EGF LAG seven-pass G-type receptor 3 OS=Mus musculus
GN=Celsr3 PE=2 SV=2
Length = 3301
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 27 LRLEESPCLSHPCQNGATCQDEEDGLFECLCSP--EFTGYLCHTRAPPKLYDTPAFNGSS 84
L E C+ C+NG TC + +G F C C F G C A +F SS
Sbjct: 1461 LDTEAGRCVPGVCRNGGTCTNAPNGGFRCQCPAGGAFEGPRCEVAA-------RSFPPSS 1513
Query: 85 HIVMKTLKAYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIV 131
++ + L+ L++ + F T + G+L YN + L+ DF++L +V
Sbjct: 1514 FVMFRGLRQRFHLTLSLSFATVQPSGLLFYNGR-LNEKHDFLALELV 1559
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 32 SPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
+PC S PC A C+D F C C P + G C
Sbjct: 1937 NPCASGPCPPHADCKDLWQ-TFSCTCRPGYYGPGC 1970
>sp|O88280|SLIT3_RAT Slit homolog 3 protein OS=Rattus norvegicus GN=Slit3 PE=2 SV=1
Length = 1523
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 25 PNLRLEESPCLSHPCQNGATC---QDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFN 81
P + L+ SPC + CQNGA C Q E C C P F G C KL
Sbjct: 1114 PMVLLQTSPCDQYECQNGAQCIVVQQEP----TCRCPPGFAGPRCE-----KLITVNFVG 1164
Query: 82 GSSHIVMKTLKAYNKLSIEIEFKTNKNDGILLYNQQN 118
S++ + + K + +I ++ T+K++GILLY N
Sbjct: 1165 KDSYVELASAKVRPQANISLQVATDKDNGILLYKGDN 1201
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 28 RLEESP--CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
R E +P C + C+N ATC D + + C+C P +TG LC
Sbjct: 992 RCEINPDDCEDNDCENSATCVDGINN-YACVCPPNYTGELC 1031
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Query: 34 CLSHPCQNGATC---QDEEDGLFECLCSPEFTGYLC 66
C+ +PCQ+G TC + DG F C C F G C
Sbjct: 959 CVQNPCQHGGTCHLSESHRDG-FSCSCPLGFEGQRC 993
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 26 NLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
N+ + + CLS PC+N TC + + C C + G C
Sbjct: 912 NIVAKCNACLSSPCKNNGTCSQDPVEQYRCTCPYSYKGKDC 952
>sp|Q9WVB4|SLIT3_MOUSE Slit homolog 3 protein OS=Mus musculus GN=Slit3 PE=2 SV=2
Length = 1523
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 25 PNLRLEESPCLSHPCQNGATC---QDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFN 81
P + L+ SPC + CQNGA C Q E C C P F G C KL
Sbjct: 1114 PMVLLQTSPCDQYECQNGAQCIVVQQEP----TCRCPPGFAGPRCE-----KLITVNFVG 1164
Query: 82 GSSHIVMKTLKAYNKLSIEIEFKTNKNDGILLYNQQN 118
S++ + + K + +I ++ T+K++GILLY N
Sbjct: 1165 KDSYVELASAKVRPQANISLQVATDKDNGILLYKGDN 1201
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 28 RLEESP--CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
R E +P C + C+N ATC D + + CLC P +TG LC
Sbjct: 992 RCEINPDDCEDNDCENSATCVDGINN-YACLCPPNYTGELC 1031
>sp|O75094|SLIT3_HUMAN Slit homolog 3 protein OS=Homo sapiens GN=SLIT3 PE=2 SV=3
Length = 1523
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 25 PNLRLEESPCLSHPCQNGATC---QDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFN 81
P + L+ SPC + CQNGA C Q E C C P F G C KL
Sbjct: 1114 PMVLLQTSPCDQYECQNGAQCIVVQQEP----TCRCPPGFAGPRCE-----KLITVNFVG 1164
Query: 82 GSSHIVMKTLKAYNKLSIEIEFKTNKNDGILLYNQQN 118
S++ + + K + +I ++ T+K++GILLY N
Sbjct: 1165 KDSYVELASAKVRPQANISLQVATDKDNGILLYKGDN 1201
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 26 NLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
N+ + + CLS PC+N TC + L+ C C + G C
Sbjct: 912 NIVAKCNACLSSPCKNNGTCTQDPVELYRCACPYSYKGKDC 952
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 28 RLEESP--CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
R E +P C + C+N ATC D + + C+C P +TG LC
Sbjct: 992 RCEINPDDCEDNDCENNATCVDGINN-YVCICPPNYTGELC 1031
>sp|Q9QYP2|CELR2_RAT Cadherin EGF LAG seven-pass G-type receptor 2 (Fragment) OS=Rattus
norvegicus GN=Celsr2 PE=2 SV=1
Length = 2144
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLC-SPEFTGYLCHTRAPPKLYDTPAFNGSSHIVMKTLK 92
C C+NG TC + G F+C C S +F C T +F S I + L+
Sbjct: 557 CTPGVCKNGGTCVNLLVGGFKCDCPSGDFEKPFCQV-------TTRSFPARSFITFRGLR 609
Query: 93 AYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIV 131
++ + F T + DG+LLYN + + DFV+L ++
Sbjct: 610 QRFHFTLALSFATKERDGLLLYNGR-FNEKHDFVALEVI 647
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 19/123 (15%)
Query: 5 VRMKR-MGCLS-----------ASVVQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGL 52
VRM+ +GC+ A + ++ P +++ C S+ C NG TC ++ D
Sbjct: 762 VRMRHFVGCMKNLQVDSRHVDMADFIANNGTVPGCPTKKNVCDSNTCHNGGTCVNQWDA- 820
Query: 53 FECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSHIVMK--TLKAYNKLSIEIEFKTNKNDG 110
F C C F G C ++ + F GSS + +L + + F+T + DG
Sbjct: 821 FSCECPLGFGGKSCAQ----EMANPQRFLGSSLVAWHGLSLPISQPWHLSLMFRTRQADG 876
Query: 111 ILL 113
+LL
Sbjct: 877 VLL 879
>sp|P55066|NCAN_MOUSE Neurocan core protein OS=Mus musculus GN=Ncan PE=2 SV=1
Length = 1268
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 23 ASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
A N ++ CL PC+NG TC DE +G F CLC P + G LC
Sbjct: 991 AGENCEIDIDDCLCSPCENGGTCIDEVNG-FICLCLPSYGGSLC 1033
>sp|P55067|NCAN_RAT Neurocan core protein OS=Rattus norvegicus GN=Ncan PE=1 SV=1
Length = 1257
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 23 ASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
A N ++ CL PC+NG TC DE +G F CLC P + G LC
Sbjct: 980 AGENCEIDIDDCLCSPCENGGTCIDEVNG-FICLCLPSYGGNLC 1022
Score = 29.3 bits (64), Expect = 8.2, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
Query: 18 VQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
V S Q P PC ++PC +G TC+ ++ C C + G C
Sbjct: 942 VASGQEDPT-----DPCENNPCLHGGTCR-TNGTMYGCSCDQGYAGENC 984
>sp|Q4VBE4|EGFLA_MOUSE Pikachurin OS=Mus musculus GN=Egflam PE=1 SV=1
Length = 1017
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 78 PAFNGSSHIVMKTLK-AYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIV 131
P F G S++ + LK +Y + +EF+ DG+LLY ++ G GDF+SLA++
Sbjct: 389 PQFFGHSYVTFEPLKNSYQAFQVTLEFRAEAEDGLLLYCGESEHGRGDFMSLALI 443
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 14/118 (11%)
Query: 26 NLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDT-------P 78
N+ PC+ PC +G +C+ ++G +EC C F G C +T P
Sbjct: 780 NVENAAHPCVGAPCAHGGSCRPRKEG-YECDCPLGFEGLNCQKECGNHCLNTIIEAIEIP 838
Query: 79 AFNGSSHIVMKTLKAYNKLSIE-----IEFKTNKNDGILLYNQQN-LDGTGDFVSLAI 130
F G S++ ++S + FKT DG+LL+ + + DF+SL +
Sbjct: 839 QFIGRSYLTYDNPNILKRVSGSRSNAFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGL 896
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 11/101 (10%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSHIVMKT--- 90
C C +G TC + + CLC F G C + P F S T
Sbjct: 569 CDEASCIHGGTCAAIKADSYICLCPLGFRGRHCEDAFALTI---PQFRESLRSYAATPWP 625
Query: 91 LKAYNKLS---IEIEFKTNKNDGILLYNQQNLDGTGDFVSL 128
L+ + LS EI F+ + DG+LLY+ G+ DF+S+
Sbjct: 626 LEPQHYLSFTEFEITFRPDSGDGVLLYSYDT--GSKDFLSI 664
>sp|O35161|CELR1_MOUSE Cadherin EGF LAG seven-pass G-type receptor 1 OS=Mus musculus
GN=Celsr1 PE=2 SV=3
Length = 3034
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSP-EFTGYLCHTRAPPKLYDTPAFNGSSHIVMKTLK 92
C S C+NG TC + G F C+C P E+ C T +F S + + L+
Sbjct: 1422 CASGVCKNGGTCVNLLIGGFHCVCPPGEYEHPYCEV-------STRSFPPQSFVTFRGLR 1474
Query: 93 AYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIV 131
++ + F T + +LLYN + + DF++L IV
Sbjct: 1475 QRFHFTVSLAFATQDRNALLLYNGR-FNEKHDFIALEIV 1512
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 12/102 (11%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAP-PKLYDTPAFNGSSHIVMKTLK 92
C CQNG TC + + + C C F G C P P+ F G S ++ L
Sbjct: 1668 CDGTSCQNGGTCVNRWN-TYLCECPLRFGGKNCEQAMPHPQ-----RFTGESVVLWSDLD 1721
Query: 93 AYNKLS--IEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132
+ + + F+T K DG+L+ + GT + L I+N
Sbjct: 1722 ITISVPWYLGLMFRTRKEDGVLM---EATAGTSSRLHLQILN 1760
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 31 ESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
E PC S PC + C+D D + C+C + G C
Sbjct: 1888 EDPCASSPCPPHSHCRDTWDS-YSCICDRGYFGKKC 1922
>sp|Q9HCU4|CELR2_HUMAN Cadherin EGF LAG seven-pass G-type receptor 2 OS=Homo sapiens
GN=CELSR2 PE=1 SV=1
Length = 2923
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLC-SPEFTGYLCHTRAPPKLYDTPAFNGSSHIVMKTLK 92
C C+NG TC + G F+C C S +F C T +F S I + L+
Sbjct: 1332 CTPGVCKNGGTCVNLLVGGFKCDCPSGDFEKPYCQV-------TTRSFPAHSFITFRGLR 1384
Query: 93 AYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIV 131
++ + F T + DG+LLYN + + DFV+L ++
Sbjct: 1385 QRFHFTLALSFATKERDGLLLYNGR-FNEKHDFVALEVI 1422
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 33/130 (25%)
Query: 5 VRMKR-MGCLS-----------ASVVQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGL 52
VRM++ +GC+ A + ++ P +++ C S+ C NG TC ++ D
Sbjct: 1537 VRMRQFVGCMRNLQVDSRHIDMADFIANNGTVPGCPAKKNVCDSNTCHNGGTCVNQWDA- 1595
Query: 53 FECLCSPEFTGYLC-HTRAPPKLYDTPAFNGSSHIVMKTLKAYNKLSIEIE--------F 103
F C C F G C A P+ H + +L A++ LS+ I F
Sbjct: 1596 FSCECPLGFGGKSCAQEMANPQ-----------HFLGSSLVAWHGLSLPISQPWYLSLMF 1644
Query: 104 KTNKNDGILL 113
+T + DG+LL
Sbjct: 1645 RTRQADGVLL 1654
>sp|Q5IS41|NCAN_PANTR Neurocan core protein OS=Pan troglodytes GN=NCAN PE=2 SV=1
Length = 1321
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 23 ASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
A N ++ CL PC+NG TC DE +G F CLC P + G C
Sbjct: 1039 AGENCEIDIDDCLCSPCENGGTCIDEVNG-FVCLCLPSYGGSFC 1081
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 29 LEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
+ PC ++PC +G TC + ++ C C F G C
Sbjct: 1007 VHSDPCENNPCLHGGTC-NANGTMYGCSCDQGFAGENC 1043
>sp|O14594|NCAN_HUMAN Neurocan core protein OS=Homo sapiens GN=NCAN PE=2 SV=3
Length = 1321
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 23 ASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
A N ++ CL PC+NG TC DE +G F CLC P + G C
Sbjct: 1039 AGENCEIDIDDCLCSPCENGGTCIDEVNG-FVCLCLPSYGGSFC 1081
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 29 LEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
+ PC ++PC +G TC + ++ C C F G C
Sbjct: 1007 VHSDPCENNPCLHGGTC-NANGTMYGCSCDQGFAGENC 1043
>sp|Q28343|PGCA_CANFA Aggrecan core protein OS=Canis familiaris GN=ACAN PE=2 SV=2
Length = 2333
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Query: 19 QSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
+S+ A P++ CLS PC NGATC D D F CLC P + G LC
Sbjct: 2074 ESAPAIPDI----DECLSSPCLNGATCVDAIDS-FTCLCLPSYRGDLC 2116
>sp|Q61483|DLL1_MOUSE Delta-like protein 1 OS=Mus musculus GN=Dll1 PE=1 SV=2
Length = 722
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 26 NLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGS 83
N LE C PC+NGA+C D ED F C C P F G +C A D P FNG
Sbjct: 323 NCELEVDECAPSPCKNGASCTDLEDS-FSCTCPPGFYGKVCELSA-MTCADGPCFNGG 378
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 34 CLSH-PCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSS 84
C H PC+NGATC + G + C C P +TG C + +P NG+S
Sbjct: 291 CTHHKPCRNGATCTNTGQGSYTCSCRPGYTGANCELEV-DECAPSPCKNGAS 341
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAP-PKLYDTPAFNGSS 84
C S PC NG TC+D + F C C P +TG C AP + P NG++
Sbjct: 446 CASSPCANGGTCRDSVND-FSCTCPPGYTGKNC--SAPVSRCEHAPCHNGAT 494
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTR 69
C PC NG C D DG + C C F+G+ C +
Sbjct: 369 CADGPCFNGGRCSDNPDGGYTCHCPLGFSGFNCEKK 404
>sp|P10079|FBP1_STRPU Fibropellin-1 OS=Strongylocentrotus purpuratus GN=EGF1 PE=1 SV=2
Length = 1064
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 26 NLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSS 84
N + C S PCQNGATC D+ +G + C C P +TG LC T + P NG +
Sbjct: 514 NCETDTDECASFPCQNGATCTDQVNG-YVCTCVPGYTGVLCETDI-NECASFPCLNGGT 570
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGS 83
C S PCQNGA C D +G F C CS +TG LC T + P NG
Sbjct: 446 CASRPCQNGAVCVDGVNG-FVCTCSAGYTGVLCETDI-NECASMPCLNGG 493
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 12/105 (11%)
Query: 6 RMKRMGCLSASVVQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYL 65
R+ C+ A+ + + N+ C S PCQNG C D +G + C C+P +TG
Sbjct: 688 RVDSYECVCAAGYTAVRCQINI----DECASAPCQNGGVCVDGVNG-YVCNCAPGYTGDN 742
Query: 66 CHTRAPPKLYDTPAFNGSSHIVM------KTLKAYNKLSIEIEFK 104
C T + P NG + I M + + Y + E +
Sbjct: 743 CETEI-DECASMPCLNGGACIEMVNGYTCQCVAGYTGVICETDID 786
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTR-----APPKLYDTPAFNGSSHIVM 88
C S PCQNG C D +G + C C P FTG C T + P L +G + V
Sbjct: 788 CASAPCQNGGVCTDTING-YICACVPGFTGSNCETNIDECASDPCLNGGICVDGVNGFVC 846
Query: 89 KTLKAYNKLSIEIEFKTNK 107
+ Y+ EI +
Sbjct: 847 QCPPNYSGTYCEISLDACR 865
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 26 NLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSH 85
N + C S PC NG C D+ + + C C P FTG C T + +P NG
Sbjct: 628 NCEINTDECASSPCMNGGLCVDQVNS-YVCFCLPGFTGIHCGTEI-DECASSPCLNGGQC 685
Query: 86 I 86
I
Sbjct: 686 I 686
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 6/89 (6%)
Query: 17 VVQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRA-----P 71
V P C S PCQNG C D +G + C C P +TG C T P
Sbjct: 353 VCAPGWTGPTCADNIDECASAPCQNGGVCIDGVNG-YMCDCQPGYTGTHCETDIDECARP 411
Query: 72 PKLYDTPAFNGSSHIVMKTLKAYNKLSIE 100
P +G + V ++ L+ E
Sbjct: 412 PCQNGGDCVDGVNGYVCICAPGFDGLNCE 440
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 6/84 (7%)
Query: 26 NLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCH-----TRAPPKLYDTPAF 80
N C S PC NG C D +G F C C P ++G C R+ P
Sbjct: 818 NCETNIDECASDPCLNGGICVDGVNG-FVCQCPPNYSGTYCEISLDACRSMPCQNGATCV 876
Query: 81 NGSSHIVMKTLKAYNKLSIEIEFK 104
N + V + + Y + EI+
Sbjct: 877 NVGADYVCECVPGYAGQNCEIDIN 900
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 6/84 (7%)
Query: 26 NLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTR-----APPKLYDTPAF 80
N ++ C S PCQNG C D +G + C C P F G C + P L
Sbjct: 210 NCEIDIDECASDPCQNGGACVDGVNG-YVCNCVPGFDGDECENNINECASSPCLNGGICV 268
Query: 81 NGSSHIVMKTLKAYNKLSIEIEFK 104
+G + L + + E+
Sbjct: 269 DGVNMFECTCLAGFTGVRCEVNID 292
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSHIVMKTLKA 93
C S PC NG C D + +FEC C FTG C + P NG I + +
Sbjct: 256 CASSPCLNGGICVDGVN-MFECTCLAGFTGVRCEVNI-DECASAPCQNGG--ICIDGING 311
Query: 94 Y 94
Y
Sbjct: 312 Y 312
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSHI------V 87
C S PC NG TC D+ +G + C+C+ + + C T + P NG + + V
Sbjct: 560 CASFPCLNGGTCNDQVNG-YVCVCAQDTSVSTCETDR-DECASAPCLNGGACMDVVNGFV 617
Query: 88 MKTLKAYNKLSIEI 101
L + + EI
Sbjct: 618 CTCLPGWEGTNCEI 631
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 26 NLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
N + C S PC NG TC D + + C+C+P +TG C
Sbjct: 324 NCENNDDECSSIPCLNGGTCVDLVN-AYMCVCAPGWTGPTC 363
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Query: 27 LRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGS 83
+ C S PC NG C D +G F C C P + G C + +P NG
Sbjct: 591 CETDRDECASAPCLNGGACMDVVNG-FVCTCLPGWEGTNCEINT-DECASSPCMNGG 645
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 29/80 (36%), Gaps = 6/80 (7%)
Query: 30 EESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTR-----APPKLYDTPAFNGSS 84
E C S PC NG C D D +EC+C+ +T C + P +G +
Sbjct: 670 EIDECASSPCLNGGQCIDRVDS-YECVCAAGYTAVRCQINIDECASAPCQNGGVCVDGVN 728
Query: 85 HIVMKTLKAYNKLSIEIEFK 104
V Y + E E
Sbjct: 729 GYVCNCAPGYTGDNCETEID 748
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSHI 86
C S PCQNG C D +G + C C F+G C + P NG + +
Sbjct: 294 CASAPCQNGGICIDGING-YTCSCPLGFSGDNCENN-DDECSSIPCLNGGTCV 344
>sp|Q9QXX0|JAG1_MOUSE Protein jagged-1 OS=Mus musculus GN=Jag1 PE=1 SV=1
Length = 1218
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 23 ASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHT 68
+ PN + E CLS PC N +C++ G FEC CSP +TG C T
Sbjct: 329 SGPNCEIAEHACLSDPCHNRGSCKETSSG-FECECSPGWTGPTCST 373
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 23 ASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCH 67
A P+ R+ + C S PC GATC DE +G ++C+C P +G CH
Sbjct: 813 AGPDCRININECQSSPCAFGATCVDEING-YQCICPPGHSGAKCH 856
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCH 67
C S+PC NG CQ+E + F+CLC F+G LC
Sbjct: 491 CASNPCLNGGHCQNEIN-RFQCLCPTGFSGNLCQ 523
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 30 EESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSHIV 87
+S C C NG TC DE D F+C+C + G C+ P NG + +V
Sbjct: 705 RDSQCDEATCNNGGTCYDEVD-TFKCMCPGGWEGTTCNIARNSSCLPNPCHNGGTCVV 761
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRA 70
C + C +G TCQD +G F+C+C P++TG C A
Sbjct: 378 CSPNNCSHGGTCQDLVNG-FKCVCPPQWTGKTCQLDA 413
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 17 VVQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
V + P + C HPC N TC D D + C C+P F G C
Sbjct: 769 VCKEGWEGPICTQNTNDCSPHPCYNSGTCVD-GDNWYRCECAPGFAGPDC 817
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 32 SPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
S CL +PC NG TC D F C+C + G +C
Sbjct: 746 SSCLPNPCHNGGTCVVNGDS-FTCVCKEGWEGPIC 779
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
C S+PC+NG TC D + ++C+CS + G C
Sbjct: 633 CESNPCKNGGTCIDGVNS-YKCICSDGWEGAHC 664
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 26 NLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNG 82
N + + CL CQN A+C+D +G + C+C P + G C R + P NG
Sbjct: 446 NCDININDCLGQ-CQNDASCRDLVNG-YRCICPPGYAGDHCE-RDIDECASNPCLNG 499
>sp|Q63722|JAG1_RAT Protein jagged-1 OS=Rattus norvegicus GN=Jag1 PE=1 SV=2
Length = 1219
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 23 ASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHT 68
+ PN + E CLS PC N +C++ G FEC CSP +TG C T
Sbjct: 329 SGPNCEIAEHACLSDPCHNRGSCKETSSG-FECECSPGWTGPTCST 373
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 23 ASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCH 67
A P+ R+ + C S PC GATC DE +G ++C+C P +G CH
Sbjct: 813 AGPDCRININECQSSPCAFGATCVDEING-YQCICPPGHSGAKCH 856
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCH 67
C S+PC NG CQ+E + F+CLC F+G LC
Sbjct: 491 CASNPCLNGGHCQNEIN-RFQCLCPTGFSGNLCQ 523
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 30 EESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSHIV 87
+S C C NG TC DE D F+C+C + G C+ P NG + +V
Sbjct: 705 RDSQCDEATCNNGGTCYDEVD-TFKCMCPGGWEGTTCNIARNSSCLPNPCHNGGTCVV 761
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRA 70
C + C +G TCQD +G F+C+C P++TG C A
Sbjct: 378 CSPNNCSHGGTCQDLVNG-FKCVCPPQWTGKTCQLDA 413
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 17 VVQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
V + P + C HPC N TC D D + C C+P F G C
Sbjct: 769 VCKEGWEGPICTQNTNDCSPHPCYNSGTCVD-GDNWYRCECAPGFAGPDC 817
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 32 SPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
S CL +PC NG TC D F C+C + G +C
Sbjct: 746 SSCLPNPCHNGGTCVVNGDS-FTCVCKEGWEGPIC 779
>sp|P21783|NOTCH_XENLA Neurogenic locus notch protein homolog OS=Xenopus laevis GN=notch1
PE=1 SV=3
Length = 2524
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 32 SPCLSHPCQNGATCQ-DEEDGLFECLCSPEFTGYLCH 67
SPC SHPC NG TCQ E+ F+C C F G CH
Sbjct: 1388 SPCASHPCYNGGTCQFFAEEPFFQCFCPKNFNGLFCH 1424
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 23 ASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHT 68
A P ++ + CLS+PCQN +TC D+ G F+C+C P + G C T
Sbjct: 444 AGPRCEIDVNECLSNPCQNDSTCLDQI-GEFQCICMPGYEGLYCET 488
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 25 PNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSS 84
P + + C S+PC+NGA C D + + C C P F+G C + P ++ FNG +
Sbjct: 939 PKCEEDINECASNPCKNGANCTDCVNS-YTCTCQPGFSGIHCESNT-PDCTESSCFNGGT 996
Query: 85 HI 86
I
Sbjct: 997 CI 998
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 28 RLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
++ + C++ PC+NGATCQ+ +G ++C C P +TG C
Sbjct: 866 EIDMNECVNRPCRNGATCQN-TNGSYKCNCKPGYTGRNC 903
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 33 PCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
PC PC NG TC+ +D ++C C P F+G C
Sbjct: 220 PCNPSPCLNGGTCRQTDDTSYDCTCLPGFSGQNC 253
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 26 NLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSH 85
N+ + E C S+PC+NG TC+D+ +G F C+C + ++C + + P +G+ H
Sbjct: 675 NININE--CDSNPCRNGGTCKDQING-FTCVCPDGYHDHMCLSEV-NECNSNPCIHGACH 730
Query: 86 IVMKTLK 92
+ K
Sbjct: 731 DGVNGYK 737
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 32 SPCLSHPCQNGATCQDEED-GLFECLCSPEFTGYLC 66
+PC PC+NG C++ ED F C C P + G C
Sbjct: 830 APCAGSPCKNGGRCKESEDFETFSCECPPGWQGQTC 865
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 18 VQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHT 68
++ + N + + C S+PC NG TC+D G + C C F+G C T
Sbjct: 740 CEAGWSGSNCDINNNECESNPCMNGGTCKDMT-GAYICTCKAGFSGPNCQT 789
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTR 69
CLS PC NG C D E+G + C C TG C T+
Sbjct: 606 CLSKPCLNGGQCTDRENG-YICTCPKGTTGVNCETK 640
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCH 67
C S PC NG TCQD G ++C C +TG C
Sbjct: 1024 CDSKPCLNGGTCQDSY-GTYKCTCPQGYTGLNCQ 1056
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 15/22 (68%)
Query: 26 NLRLEESPCLSHPCQNGATCQD 47
N E + CLSHPCQNG TC D
Sbjct: 1178 NCSEEINECLSHPCQNGGTCID 1199
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 23 ASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNG 82
+ PN + + C S+PC N TC D+ G ++C C +TG +C P +P NG
Sbjct: 783 SGPNCQTNINECSSNPCLNHGTCIDDVAG-YKCNCMLPYTGAICEAVLAP-CAGSPCKNG 840
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 26 NLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCH 67
N + C S+ C NG C D+ DG +EC C P +TG LC+
Sbjct: 636 NCETKIDDCASNLCDNGK-CIDKIDG-YECTCEPGYTGKLCN 675
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
C S+ C+NG TC D + + C C P++TG C
Sbjct: 260 CPSNNCRNGGTCVDGVN-TYNCQCPPDWTGQYC 291
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 31 ESPCLSHPCQNGATCQ-DEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNG 82
++ C+++PC+NG TC+ ++C C P +TG C P P NG
Sbjct: 103 DNACVNNPCRNGGTCELLNSVTEYKCRCPPGWTGDSCQQADP--CASNPCANG 153
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSS 84
C +PC+NG C +E G + C C FTG C P +P NG +
Sbjct: 183 CSQNPCKNGGQCINEF-GSYRCTCQNRFTGRNCDEPYVP-CNPSPCLNGGT 231
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
C S PC+NGA C D + + C C+ FTG C
Sbjct: 531 CTSTPCKNGAKCLDGPNS-YTCQCTEGFTGRHC 562
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
C+ PC G TC+D F CLC P +TG LC
Sbjct: 569 CIPDPCHYG-TCKDGI-ATFTCLCRPGYTGRLC 599
>sp|P13611|CSPG2_HUMAN Versican core protein OS=Homo sapiens GN=VCAN PE=1 SV=3
Length = 3396
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Query: 29 LEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSHIVM 88
L+ C S+PC+NGATC D + F CLC P + G LC Y F G +
Sbjct: 3126 LDFDECHSNPCRNGATCVDGFN-TFRCLCLPSYVGALCEQDTETCDYGWHKFQGQCYKYF 3184
Query: 89 KTLKAYNKLSIEIEFKTNKNDGILLYNQQ 117
+ ++ E + IL + +Q
Sbjct: 3185 AHRRTWDAAERECRLQGAHLTSILSHEEQ 3213
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSS 84
C +PC NG TC E + C C P ++G C + + P NG++
Sbjct: 3093 CKMNPCLNGGTCYPTETS-YVCTCVPGYSGDQCELDF-DECHSNPCRNGAT 3141
>sp|P46531|NOTC1_HUMAN Neurogenic locus notch homolog protein 1 OS=Homo sapiens GN=NOTCH1
PE=1 SV=4
Length = 2555
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 25/50 (50%)
Query: 17 VVQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
V +++ PN PC PCQNG TC+ D EC C P FTG C
Sbjct: 205 VCRATHTGPNCERPYVPCSPSPCQNGGTCRPTGDVTHECACLPGFTGQNC 254
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 24 SPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
P ++ + C+S+PCQN ATC D+ G F+C+C P + G C
Sbjct: 446 GPRCEIDVNECVSNPCQNDATCLDQI-GEFQCICMPGYEGVHC 487
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 24 SPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCH 67
PN + C S PC +G TC D+ DG +EC C P +TG +C+
Sbjct: 635 GPNCEINLDDCASSPCDSG-TCLDKIDG-YECACEPGYTGSMCN 676
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSHI 86
C S PC+NGA C D D + C C F+G C P ++ FNG + +
Sbjct: 949 CASDPCRNGANCTDCVDS-YTCTCPAGFSGIHCENNT-PDCTESSCFNGGTCV 999
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 32 SPCLS-HPCQNGATCQ-DEEDGLFECLCSPEFTGYLCH 67
SPCL +PC N TC+ E + CLC +F G LCH
Sbjct: 1389 SPCLGGNPCYNQGTCEPTSESPFYRCLCPAKFNGLLCH 1426
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 26 NLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHT 68
N + + C S+PC NG TC+D G + C C F+G C T
Sbjct: 749 NCDINNNECESNPCVNGGTCKDMTSG-YVCTCREGFSGPNCQT 790
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 26 NLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
N E CLSHPCQNG TC D + ++C C G C
Sbjct: 1179 NCSEEIDECLSHPCQNGGTCLDLPN-TYKCSCPRGTQGVHC 1218
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 31 ESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGS 83
++ CL++PC+NG TC ++C C P ++G C P P NG
Sbjct: 103 DNACLTNPCRNGGTCDLLTLTEYKCRCPPGWSGKSCQQADP--CASNPCANGG 153
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 30 EESPCLSHPCQNGATCQ-DEEDGL--FECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSHI 86
+ +PCLS PC+N TC + G+ + C C+ F+G LC T P NG +
Sbjct: 59 DPNPCLSTPCKNAGTCHVVDRRGVADYACSCALGFSGPLCLTPLDNACLTNPCRNGGTCD 118
Query: 87 VMKTLKAY 94
++ TL Y
Sbjct: 119 LL-TLTEY 125
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 32 SPCLSHPCQNGATCQDEED-GLFECLCSPEFTGYLC 66
+PC PC+NG C+ ED F C+C + G C
Sbjct: 831 APCAPSPCRNGGECRQSEDYESFSCVCPTGWQGQTC 866
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 18 VQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
Q+ + N + C +PC NG +C D + F C C P F G C
Sbjct: 895 CQAGYSGRNCETDIDDCRPNPCHNGGSCTDGINTAF-CDCLPGFRGTFC 942
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
C S PC+NGA C D + + C+C+ +TG C
Sbjct: 532 CASTPCKNGAKCLDGPN-TYTCVCTEGYTGTHC 563
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCH 67
C C NG TC D + F CLC P FTG C
Sbjct: 987 CTESSCFNGGTCVDGINS-FTCLCPPGFTGSYCQ 1019
Score = 28.9 bits (63), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSS 84
C+ PC++GA+CQ+ G + C C ++G C T P NG S
Sbjct: 873 CVLSPCRHGASCQNTHGG-YRCHCQAGYSGRNCETDI-DDCRPNPCHNGGS 921
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 23 ASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNG 82
+ PN + + C S+PC N TC D+ G ++C C +TG C P +P NG
Sbjct: 784 SGPNCQTNINECASNPCLNQGTCIDDVAG-YKCNCLLPYTGATCEVVLAP-CAPSPCRNG 841
Query: 83 S 83
Sbjct: 842 G 842
>sp|P55068|PGCB_RAT Brevican core protein OS=Rattus norvegicus GN=Bcan PE=1 SV=2
Length = 883
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
C+ PC NG TC +E++G F CLC P + G LC
Sbjct: 626 CIPSPCHNGGTCLEEKEG-FRCLCVPGYGGDLC 657
>sp|Q61361|PGCB_MOUSE Brevican core protein OS=Mus musculus GN=Bcan PE=1 SV=2
Length = 883
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
C+ PC NG TC +E++G F CLC P + G LC
Sbjct: 626 CIPSPCHNGGTCLEEKEG-FRCLCLPGYGGDLC 657
>sp|Q90953|CSPG2_CHICK Versican core protein OS=Gallus gallus GN=VCAN PE=2 SV=1
Length = 3562
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Query: 29 LEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSHIVM 88
L+ C S+PC+NGATC D + F CLC P + G LC Y F G +
Sbjct: 3291 LDIDECQSNPCRNGATCIDGLN-TFTCLCLPSYIGALCEQDTETCDYGWHKFQGQCYKYF 3349
Query: 89 KTLKAYNKLSIEIEFKTNKNDGILLYNQQ 117
+ ++ E + IL + +Q
Sbjct: 3350 AHRRTWDTAERECRLQGAHLTSILSHEEQ 3378
Score = 35.8 bits (81), Expect = 0.089, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 31 ESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
+ PC S+PC NG TC + C C P F G C
Sbjct: 3255 QDPCKSNPCLNGGTCY-PRGSFYICTCLPGFNGEQC 3289
>sp|P81282|CSPG2_BOVIN Versican core protein OS=Bos taurus GN=VCAN PE=1 SV=2
Length = 3381
Score = 43.1 bits (100), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Query: 29 LEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSHIVM 88
L+ C S+PC+NGATC D + F CLC P + G LC Y F G +
Sbjct: 3111 LDFDECHSNPCRNGATCIDGFN-TFRCLCLPSYVGALCEQDTETCDYGWHKFQGQCYKYF 3169
Query: 89 KTLKAYNKLSIEIEFKTNKNDGILLYNQQ 117
+ ++ E + IL + +Q
Sbjct: 3170 AHRRTWDAAERECRLQGAHLTSILSHEEQ 3198
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSHI 86
C +PC NG TC E + C C P ++G C + + P NG++ I
Sbjct: 3078 CKMNPCLNGGTCYPTETS-YVCTCVPGYSGDRCELDF-DECHSNPCRNGATCI 3128
>sp|P80370|DLK1_HUMAN Protein delta homolog 1 OS=Homo sapiens GN=DLK1 PE=1 SV=3
Length = 383
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 20/83 (24%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC----------HTRAP----------PK 73
C S PCQNG TC +ECLC PEFTG C TR P P
Sbjct: 212 CASSPCQNGGTCLQHTQVSYECLCKPEFTGLTCVKKRALSPQQVTRLPSGYGLAYRLTPG 271
Query: 74 LYDTPAFNGSSHIVMKTLKAYNK 96
+++ P I+ ++K NK
Sbjct: 272 VHELPVQQPEHRILKVSMKELNK 294
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYD-TPAFNGSSHI 86
C S PC N TC +DGL+EC C+P ++G C + P + + +P +G + +
Sbjct: 92 CSSAPCANNRTCVSLDDGLYECSCAPGYSGKDCQKKDGPCVINGSPCQHGGTCV 145
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 26 NLRLEESPCL--SHPCQNGATCQDEED--GLFECLCSPEFTGYLCHTRA 70
+ + ++ PC+ PCQ+G TC D+E CLC P F+G C A
Sbjct: 123 DCQKKDGPCVINGSPCQHGGTCVDDEGRASHASCLCPPGFSGNFCEIVA 171
>sp|Q70E20|SNED1_MOUSE Sushi, nidogen and EGF-like domain-containing protein 1 OS=Mus
musculus GN=Sned1 PE=2 SV=2
Length = 1403
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 12 CLSASVVQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTR 69
C+ + Q L SPCLS+PCQNG TC D ++G + C C F G C R
Sbjct: 411 CICVEPFEGPQCETGSYLVPSPCLSNPCQNGGTCVDADEG-YVCECPEGFMGLDCRER 467
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 29 LEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCH 67
+ SPC PC NG TC+D F C C P +TG+ C
Sbjct: 656 IAPSPCFRSPCMNGGTCEDLGTD-FSCYCQPGYTGHRCQ 693
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSS--HIVMK 89
C S PC+NG TC++ D + C C FTG C P P NG + H + K
Sbjct: 584 CSSGPCRNGGTCKEMGD-EYRCTCPYRFTGRHCEIGKPDSCASGPCHNGGTCFHYIGK 640
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSS 84
C S PC NG TC G ++C C P F+G C AP + +P NG +
Sbjct: 623 CASGPCHNGGTCF-HYIGKYKCDCPPGFSGRHCEI-APSPCFRSPCMNGGT 671
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 30 EESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPP 72
E C S PCQ+G C+D G + C+C F GY C T + P
Sbjct: 829 EVDACASSPCQHGGRCED-GGGAYLCVCPEGFFGYNCETVSDP 870
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 29 LEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPP 72
L+ + C SHPCQNG TC + F C C F G C + P
Sbjct: 310 LDVNECASHPCQNGGTCTHGVNS-FSCQCPAGFKGPTCESAQSP 352
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 32 SPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSS 84
SPC S PC NG +C ED + C C F G C P P NG +
Sbjct: 543 SPCDSDPCFNGGSCDAHEDS-YTCECPRGFHGRHCEKARPHLCSSGPCRNGGT 594
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 19 QSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
Q + P +E C S PC +G +CQD ++CLCSP + G C
Sbjct: 742 QGVWSQPPQCIEVDECRSQPCLHGGSCQD-LIADYQCLCSPGYEGVHC 788
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 25 PNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHT 68
P +SPC + CQNG CQ E C+C +TG C T
Sbjct: 344 PTCESAQSPCDNKVCQNGGQCQAESSSAV-CVCQAGYTGATCET 386
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Query: 17 VVQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRA---PPK 73
V Q+ + C S PCQNG +C D G + C+C F G C T + P
Sbjct: 374 VCQAGYTGATCETDVDECSSDPCQNGGSCVDLV-GNYSCICVEPFEGPQCETGSYLVPSP 432
Query: 74 LYDTPAFNGSSHI 86
P NG + +
Sbjct: 433 CLSNPCQNGGTCV 445
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 29 LEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHT 68
LE C + PC+NG +C+D F C C F G C T
Sbjct: 790 LETDECQAQPCRNGGSCRDLPRA-FICQCPEGFVGIHCET 828
>sp|P13608|PGCA_BOVIN Aggrecan core protein OS=Bos taurus GN=ACAN PE=1 SV=3
Length = 2364
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTR 69
CLS PC NGATC D D F CLC P + G +C +
Sbjct: 2117 CLSSPCLNGATCVDAIDS-FTCLCLPSYQGDVCEIQ 2151
>sp|Q9JI71|DLL4_MOUSE Delta-like protein 4 OS=Mus musculus GN=Dll4 PE=2 SV=2
Length = 686
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 32 SPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSS 84
S C S+PC+NG +C+D+E+ + CLC P + G C + D+P FNG S
Sbjct: 327 SKCASNPCRNGGSCKDQENS-YHCLCPPGYYGQHCE-HSTLTCADSPCFNGGS 377
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 29 LEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTR-APPKLYDTPAFNGSS 84
L S C PC +G TC D E+G C C F+G C R P FNG++
Sbjct: 440 LHISDCARSPCAHGGTCHDLENGPV-CTCPAGFSGRRCEVRITHDACASGPCFNGAT 495
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 34 CLSHPCQNGATCQDEEDG-LFECLCSPEFTGYLCHTRAPPKLYDTPAFNG 82
C PC NG +C++ G + C C P FTG C + + P NG
Sbjct: 367 CADSPCFNGGSCRERNQGSSYACECPPNFTGSNCEKKV-DRCTSNPCANG 415
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 34 CLSH-PCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSS 84
C H PC+NG+TC + + C C P +TG C K P NG S
Sbjct: 289 CTHHSPCKNGSTCSNSGPKGYTCTCLPGYTGEHCEL-GLSKCASNPCRNGGS 339
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
C S+PC NG CQ+ C C P FTG C
Sbjct: 407 CTSNPCANGGQCQNRGPSR-TCRCRPGFTGTHC 438
>sp|Q90Y57|JAG1A_DANRE Protein jagged-1a OS=Danio rerio GN=jag1a PE=2 SV=1
Length = 1242
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 30 EESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSHIV 87
ES C C NG TC DE D F+CLCSP + G C+ P NG++ +V
Sbjct: 708 RESQCDEDTCNNGGTCSDEGDS-FKCLCSPGWEGATCNIAKNSSCLPNPCENGATCVV 764
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCH 67
C S PC NG CQD +G F+CLC P F+G C
Sbjct: 492 CASRPCLNGGRCQDTLNG-FQCLCPPGFSGATCQ 524
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 20 SSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCH 67
S A P+ R+ + C S PC G+TC DE +G + CLC P TG C
Sbjct: 813 SGFAGPDCRININECQSSPCAFGSTCVDEING-YRCLCPPGRTGPRCQ 859
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 30 EESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
+ S CL +PC+NGATC DG F C+C + G C
Sbjct: 747 KNSSCLPNPCENGATCVVTGDG-FTCVCKEGWEGPTC 782
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 20 SSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPA 79
+ P+ + E C +PC + C D DG F+C+C ++TG C A + ++P
Sbjct: 365 AGWTGPSCNINEDDCSPNPCNHSGVCVDLVDG-FKCICPVQWTGKTCLIDA-NECEESPC 422
Query: 80 FNGSS 84
N S
Sbjct: 423 VNAHS 427
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 26 NLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCH 67
N ++ CLS PC NG C + G FEC C+ +TG C+
Sbjct: 333 NCERADNACLSEPCLNGGLCVESSLG-FECQCAAGWTGPSCN 373
>sp|Q28062|PGCB_BOVIN Brevican core protein OS=Bos taurus GN=BCAN PE=1 SV=1
Length = 912
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
C+ PC NG TC +EE+G+ CLC P + G LC
Sbjct: 651 CVPSPCHNGGTCLEEEEGV-RCLCLPGYGGDLC 682
>sp|P78504|JAG1_HUMAN Protein jagged-1 OS=Homo sapiens GN=JAG1 PE=1 SV=3
Length = 1218
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 23 ASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHT 68
+ PN + E CLS PC N +C++ G FEC CSP +TG C T
Sbjct: 329 SGPNCEIAEHACLSDPCHNRGSCKETSLG-FECECSPGWTGPTCST 373
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 23 ASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCH 67
A P+ R+ + C S PC GATC DE +G + C+C P +G C
Sbjct: 813 AGPDCRININECQSSPCAFGATCVDEING-YRCVCPPGHSGAKCQ 856
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 30 EESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSHIV 87
+S C C NG TC DE D F+C+C + G C+ P NG + +V
Sbjct: 705 RDSQCDEATCNNGGTCYDEGDA-FKCMCPGGWEGTTCNIARNSSCLPNPCHNGGTCVV 761
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCH 67
C S+PC NG CQ+E + F+CLC F+G LC
Sbjct: 491 CASNPCLNGGHCQNEIN-RFQCLCPTGFSGNLCQ 523
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRA 70
C + C +G TCQD +G F+C+C P++TG C A
Sbjct: 378 CSPNNCSHGGTCQDLVNG-FKCVCPPQWTGKTCQLDA 413
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 17 VVQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
V + P + C HPC N TC D D + C C+P F G C
Sbjct: 769 VCKEGWEGPICAQNTNDCSPHPCYNSGTCVD-GDNWYRCECAPGFAGPDC 817
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHT 68
C S+PC+NG TC D + ++C+CS + G C T
Sbjct: 633 CESNPCRNGGTCIDGVNS-YKCICSDGWEGAYCET 666
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTR 69
C +PC NG TC+D + + C C + G CH+R
Sbjct: 671 CSQNPCHNGGTCRDLVNDFY-CDCKNGWKGKTCHSR 705
>sp|Q96GW7|PGCB_HUMAN Brevican core protein OS=Homo sapiens GN=BCAN PE=1 SV=2
Length = 911
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLC 66
C+ PC NG TC +EE+G+ CLC P + G LC
Sbjct: 650 CVPSPCHNGGTCLEEEEGV-RCLCLPGYGGDLC 681
>sp|Q09163|DLK1_MOUSE Protein delta homolog 1 OS=Mus musculus GN=Dlk1 PE=1 SV=1
Length = 385
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYD-TPAFNGSSHI 86
C S PC N TC D E G +EC C+P F+G C +A P + + +P +G + +
Sbjct: 92 CTSTPCANNGTCVDLEKGQYECSCTPGFSGKDCQHKAGPCVINGSPCQHGGACV 145
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 33/85 (38%), Gaps = 20/85 (23%)
Query: 32 SPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHT--------------------RAP 71
S C S PCQNG TC FECLC P F G C R
Sbjct: 212 SNCASGPCQNGGTCLQHTQVSFECLCKPPFMGPTCAKKRGASPVQVTHLPSGYGLTYRLT 271
Query: 72 PKLYDTPAFNGSSHIVMKTLKAYNK 96
P +++ P HI+ ++K NK
Sbjct: 272 PGVHELPVQQPEQHILKVSMKELNK 296
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 26 NLRLEESPCL--SHPCQNGATCQDEED--GLFECLCSPEFTGYLCHTRA 70
+ + + PC+ PCQ+G C D+E CLC P F+G C A
Sbjct: 123 DCQHKAGPCVINGSPCQHGGACVDDEGQASHASCLCPPGFSGNFCEIVA 171
>sp|P97677|DLL1_RAT Delta-like protein 1 OS=Rattus norvegicus GN=Dll1 PE=2 SV=1
Length = 714
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 26 NLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGS 83
N LE C PC+NG +C D ED + C C P F G +C A D P FNG
Sbjct: 323 NCELEVDECAPSPCRNGGSCTDLEDS-YSCTCPPGFYGKVCELSA-MTCADGPCFNGG 378
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 34 CLSH-PCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSS 84
C H PC+NGATC + G + C C P +TG C + +P NG S
Sbjct: 291 CTHHKPCRNGATCTNTGQGSYTCSCRPGYTGANCELEV-DECAPSPCRNGGS 341
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTR 69
C PC NG C D DG + C C F+G+ C +
Sbjct: 369 CADGPCFNGGRCSDNPDGGYTCHCPAGFSGFNCEKK 404
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 34 CLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAP-PKLYDTPAFNGSS 84
C S PC NG TC+D + F C C P +TG C AP + P NG++
Sbjct: 446 CASSPCANGGTCRDSVND-FSCTCPPGYTGRNC--SAPVSRCEHAPCHNGAT 494
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,492,703
Number of Sequences: 539616
Number of extensions: 1985439
Number of successful extensions: 6233
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 151
Number of HSP's that attempted gapping in prelim test: 4109
Number of HSP's gapped (non-prelim): 1826
length of query: 132
length of database: 191,569,459
effective HSP length: 98
effective length of query: 34
effective length of database: 138,687,091
effective search space: 4715361094
effective search space used: 4715361094
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)