Query psy11297
Match_columns 132
No_of_seqs 153 out of 1321
Neff 8.8
Searched_HMMs 29240
Date Fri Aug 16 23:19:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11297.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11297hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3asi_A Neurexin-1-alpha; beta- 99.6 1.2E-14 4E-19 111.3 10.1 100 26-132 180-285 (410)
2 3u7u_G Neuregulin 1; signaling 99.5 2.1E-14 7E-19 80.7 4.2 47 24-71 1-52 (55)
3 3qcw_A Neurexin-1-alpha; synap 99.5 6.1E-14 2.1E-18 119.7 6.1 93 32-132 191-287 (1245)
4 3qcw_A Neurexin-1-alpha; synap 99.4 4.7E-13 1.6E-17 114.3 10.3 100 26-132 1012-1117(1245)
5 1edm_B Factor IX; epidermal gr 99.2 2.6E-11 8.8E-16 63.2 4.7 38 30-68 2-39 (39)
6 2vj3_A Neurogenic locus notch 99.1 1.2E-10 4E-15 76.5 6.9 79 7-88 22-100 (135)
7 1tpg_A T-plasminogen activator 99.1 8.5E-11 2.9E-15 72.4 5.1 53 18-72 36-90 (91)
8 4d90_A EGF-like repeat and dis 99.1 3.8E-10 1.3E-14 74.5 7.4 70 17-88 26-114 (143)
9 1egf_A Epidermal growth factor 99.0 4.7E-10 1.6E-14 62.3 5.0 41 30-71 2-47 (53)
10 1a3p_A Epidermal growth factor 99.0 3.3E-10 1.1E-14 60.8 4.2 38 33-71 2-44 (45)
11 2vj3_A Neurogenic locus notch 99.0 3E-10 1E-14 74.5 4.8 57 17-74 69-125 (135)
12 1hae_A Heregulin-alpha; growth 99.0 1.3E-10 4.3E-15 66.9 2.2 43 31-74 6-53 (63)
13 1k36_A Epiregulin; EGF-like fo 98.9 1.3E-09 4.3E-14 58.8 3.6 39 30-69 2-44 (46)
14 2k2s_B Micronemal protein 6; m 98.9 3.9E-10 1.3E-14 64.4 1.3 40 29-69 9-51 (61)
15 1pz7_A Agrin; structural prote 98.8 5.5E-09 1.9E-13 72.9 6.4 65 60-132 4-84 (204)
16 4d90_A EGF-like repeat and dis 98.8 3.5E-09 1.2E-13 69.8 5.0 53 17-70 83-135 (143)
17 3pve_A Agrin, AGRN protein; mR 98.7 2.7E-08 9.3E-13 68.6 6.4 57 76-132 10-71 (189)
18 1h30_A GAS6, growth-arrest-spe 98.7 2.3E-08 7.8E-13 76.7 5.9 80 33-132 15-96 (422)
19 1nql_B Epidermal growth factor 98.6 1.2E-08 4.1E-13 56.6 2.4 35 35-70 10-46 (53)
20 2c4f_L Coagulation factor VII 98.6 2E-08 7E-13 66.4 3.6 44 29-73 45-88 (142)
21 3h5c_B Vitamin K-dependent pro 98.6 3.4E-08 1.2E-12 72.9 3.8 44 30-74 4-47 (317)
22 1x7a_L Coagulation factor IX, 98.6 6.7E-08 2.3E-12 64.2 4.5 47 25-74 43-89 (146)
23 3v64_A Low-density lipoprotein 98.5 1.7E-07 5.7E-12 64.7 6.1 55 77-132 4-71 (191)
24 2vj2_A Jagged-1; signalling, p 98.5 4E-08 1.4E-12 66.8 2.5 50 18-67 118-168 (169)
25 1emn_A Fibrillin; extracellula 98.5 1.6E-07 5.4E-12 56.4 4.5 56 29-88 3-61 (82)
26 3ca7_A Protein spitz; argos, E 98.5 5.1E-08 1.8E-12 53.7 2.1 34 36-69 13-49 (52)
27 1nfu_B Coagulation factor XA, 98.5 1.9E-08 6.7E-13 69.9 -0.0 48 25-74 37-85 (195)
28 2h0b_A Neurexin-1-alpha; B-san 98.4 4.7E-07 1.6E-11 61.8 6.4 53 76-132 6-61 (184)
29 2gy5_A Angiopoietin-1 receptor 98.4 7E-08 2.4E-12 74.3 2.3 105 18-132 267-388 (423)
30 3nt1_A Prostaglandin-endoperox 98.4 1.2E-07 4.2E-12 75.5 3.7 40 31-70 1-41 (587)
31 1q4g_A Prostaglandin G/H synth 98.4 9.6E-08 3.3E-12 75.8 2.9 39 31-70 2-42 (553)
32 2r16_A Neurexin-1-alpha; beta- 98.4 4.2E-07 1.4E-11 62.2 5.7 55 76-132 6-62 (182)
33 3sh4_A LG3 peptide; actin disa 98.4 8E-07 2.7E-11 61.5 6.9 56 77-132 7-70 (195)
34 2vh0_B Activated factor XA lig 98.4 3.9E-08 1.3E-12 64.4 -0.0 48 25-74 37-85 (134)
35 1yo8_A Thrombospondin-2; EGF, 98.4 7.2E-07 2.4E-11 71.7 7.0 75 13-89 25-122 (634)
36 3asi_A Neurexin-1-alpha; beta- 98.4 1.1E-06 3.7E-11 67.0 7.5 52 78-132 8-60 (410)
37 3ltf_D Protein spitz; receptor 98.4 1.1E-07 3.8E-12 53.6 1.4 33 38-70 15-50 (58)
38 1aut_L Activated protein C; se 98.4 2E-07 6.7E-12 59.3 2.7 44 30-74 5-58 (114)
39 1d2s_A SHBG, sex hormone-bindi 98.3 1E-06 3.6E-11 59.7 6.0 50 80-132 10-61 (170)
40 4fbr_A Lectin, myxobacterial h 98.3 3.7E-09 1.3E-13 76.6 -7.1 49 23-73 92-140 (267)
41 1z1y_A Ookinete surface protei 98.3 1.7E-07 5.9E-12 64.3 1.5 78 7-87 19-107 (186)
42 2bou_A EGF-like module contain 98.3 3E-07 1E-11 60.5 2.6 61 25-88 39-115 (143)
43 1emn_A Fibrillin; extracellula 98.2 7.4E-07 2.5E-11 53.4 3.3 56 6-65 19-77 (82)
44 1yo8_A Thrombospondin-2; EGF, 98.2 1.6E-06 5.4E-11 69.7 5.8 56 30-87 2-65 (634)
45 1g1s_A P-selectin; selectin, l 98.2 6.3E-07 2.1E-11 59.9 2.7 41 32-74 120-160 (162)
46 1z1y_A Ookinete surface protei 98.2 4.4E-07 1.5E-11 62.2 1.7 69 18-89 78-157 (186)
47 2r1b_A Neurexin-1-beta, neurex 98.2 3E-06 1E-10 59.7 6.0 54 78-132 13-71 (220)
48 1tpg_A T-plasminogen activator 98.2 1.5E-06 5E-11 53.2 3.4 60 18-89 6-66 (91)
49 1f5f_A SHBG, sex hormone-bindi 98.1 4.2E-06 1.4E-10 58.2 6.1 46 84-132 28-73 (205)
50 1lmj_A Fibrillin 1; EGF, calci 98.1 1E-06 3.5E-11 53.2 2.6 42 30-74 2-50 (86)
51 2r1d_A Neurexin-1-beta, neurex 98.1 5.1E-06 1.8E-10 58.8 6.4 53 78-132 43-99 (226)
52 1z6c_A Vitamin K-dependent pro 98.1 5.7E-07 1.9E-11 54.5 1.0 47 30-80 2-54 (87)
53 3bod_A Neurexin-1-alpha; neure 98.1 8.4E-06 2.9E-10 55.5 6.8 54 78-132 7-65 (178)
54 4fbr_A Lectin, myxobacterial h 98.1 9.2E-08 3.2E-12 69.3 -3.4 79 4-85 4-90 (267)
55 1dyk_A Laminin alpha 2 chain; 98.1 1.8E-05 6.1E-10 60.0 8.7 49 82-132 42-92 (394)
56 2jd4_A Laminin subunit alpha-1 98.1 1.4E-05 4.6E-10 60.3 7.9 50 81-132 27-78 (383)
57 1z6c_A Vitamin K-dependent pro 98.0 1.1E-06 3.9E-11 53.2 1.3 61 8-74 20-84 (87)
58 2c4f_L Coagulation factor VII 98.0 4E-06 1.4E-10 55.2 3.8 63 7-70 62-131 (142)
59 2jd4_A Laminin subunit alpha-1 98.0 9.9E-06 3.4E-10 61.0 6.1 53 77-132 200-254 (383)
60 1g1t_A E-selectin; EGF, adhesi 97.9 3.2E-06 1.1E-10 56.0 2.2 38 32-70 120-157 (157)
61 2fd6_A Urokinase-type plasmino 97.9 9.5E-06 3.3E-10 52.2 4.3 36 38-73 2-40 (122)
62 1nfu_B Coagulation factor XA, 97.9 5.8E-06 2E-10 57.4 3.1 59 8-70 58-123 (195)
63 2vh0_B Activated factor XA lig 97.9 7E-06 2.4E-10 53.6 3.3 50 18-70 67-123 (134)
64 2w86_A Fibrillin-1, fibrillin1 97.9 5.6E-06 1.9E-10 54.6 2.5 35 28-64 1-35 (147)
65 2wjs_A Laminin subunit alpha-2 97.9 4.2E-05 1.4E-09 61.0 7.8 54 77-132 12-66 (608)
66 2bou_A EGF-like module contain 97.9 5.7E-06 2E-10 54.3 2.3 41 26-68 92-134 (143)
67 2i9a_A Urokinase-type plasmino 97.8 1.4E-05 4.8E-10 53.0 4.0 43 26-71 5-49 (145)
68 1lmj_A Fibrillin 1; EGF, calci 97.8 5.5E-06 1.9E-10 49.9 1.6 38 24-64 40-79 (86)
69 2vj2_A Jagged-1; signalling, p 97.8 3.3E-06 1.1E-10 57.2 0.4 61 18-87 87-148 (169)
70 3fcs_B Integrin beta-3; beta p 97.8 1.8E-05 6.1E-10 64.3 4.6 61 18-86 549-615 (690)
71 3h5c_B Vitamin K-dependent pro 97.8 2.2E-05 7.6E-10 57.7 4.6 49 11-63 24-75 (317)
72 1aut_L Activated protein C; se 97.8 4.5E-05 1.5E-09 48.2 5.3 72 6-86 28-107 (114)
73 2w86_A Fibrillin-1, fibrillin1 97.7 5.7E-06 2E-10 54.6 0.8 46 17-65 91-141 (147)
74 1uzk_A Fibrillin-1; glycoprote 97.7 3.1E-05 1.1E-09 51.8 3.6 40 30-72 2-46 (162)
75 1xdt_R Hbegf, heparin-binding 97.7 1.3E-05 4.6E-10 47.5 1.5 38 31-69 37-78 (79)
76 2wjs_A Laminin subunit alpha-2 97.7 0.0001 3.5E-09 58.8 7.1 53 77-132 389-441 (608)
77 1dx5_I Thrombomodulin; serine 97.7 1E-05 3.5E-10 51.6 0.9 42 33-79 45-89 (118)
78 3p5b_L Low density lipoprotein 97.6 5.9E-05 2E-09 57.2 4.8 54 6-64 14-71 (400)
79 1dyk_A Laminin alpha 2 chain; 97.6 0.00014 4.7E-09 55.1 6.7 52 78-132 214-266 (394)
80 2wg3_C Hedgehog-interacting pr 97.6 9.8E-06 3.4E-10 63.0 0.3 72 4-87 366-438 (463)
81 3cfw_A L-selectin; EGF, cell a 97.6 5.6E-05 1.9E-09 50.4 3.6 37 32-69 120-156 (164)
82 1apq_A Complement protease C1R 97.5 0.00011 3.9E-09 39.8 4.1 32 29-63 2-43 (53)
83 2w2n_E LDL receptor, low-densi 97.5 4.4E-05 1.5E-09 47.9 2.6 52 22-79 22-78 (107)
84 2rnl_A Amphiregulin; AR, color 97.5 0.00015 5.3E-09 39.3 4.1 36 32-68 10-49 (50)
85 1h30_A GAS6, growth-arrest-spe 97.5 0.00016 5.4E-09 55.3 5.7 55 77-132 221-285 (422)
86 3fcs_B Integrin beta-3; beta p 97.5 7.7E-05 2.6E-09 60.6 4.0 64 18-86 462-543 (690)
87 1x7a_L Coagulation factor IX, 97.5 5.8E-05 2E-09 49.9 2.6 59 7-70 63-128 (146)
88 3e50_C Protransforming growth 97.4 0.00015 5E-09 39.3 3.3 32 36-68 13-45 (50)
89 1iox_A Betacellulin; EGF-like 97.4 0.00014 4.8E-09 39.4 3.2 34 36-70 13-47 (50)
90 2ygq_A WIF-1, WNT inhibitory f 97.4 0.00014 4.8E-09 54.0 4.1 45 18-69 169-213 (324)
91 1dx5_I Thrombomodulin; serine 97.3 0.0001 3.5E-09 46.9 2.4 35 29-66 2-37 (118)
92 2w2n_E LDL receptor, low-densi 97.3 3.8E-05 1.3E-09 48.2 0.2 55 5-64 42-100 (107)
93 2ygq_A WIF-1, WNT inhibitory f 97.3 0.00012 4E-09 54.5 2.9 44 18-68 201-244 (324)
94 3v65_B Low-density lipoprotein 97.3 4.4E-05 1.5E-09 57.6 0.3 47 11-62 22-73 (386)
95 2ygo_A WIF-1, WNT inhibitory f 97.2 0.00017 5.7E-09 49.5 2.8 39 25-70 144-182 (188)
96 2wg3_C Hedgehog-interacting pr 97.2 6.2E-05 2.1E-09 58.5 0.6 46 17-69 411-456 (463)
97 3k6s_B Integrin beta-2; cell r 97.1 0.00023 7.8E-09 57.9 3.1 46 18-68 542-592 (687)
98 1uzk_A Fibrillin-1; glycoprote 97.1 0.00011 3.8E-09 49.0 0.9 37 27-65 118-156 (162)
99 3v65_B Low-density lipoprotein 97.0 0.00014 4.7E-09 54.8 0.9 28 51-79 22-53 (386)
100 2gy5_A Angiopoietin-1 receptor 97.0 0.00029 9.8E-09 54.2 2.6 44 18-69 189-232 (423)
101 2p28_B Integrin beta-2; hybrid 97.0 0.00028 9.4E-09 49.7 2.0 43 22-69 168-215 (217)
102 2kl7_A Fibulin-4; secreted, ca 96.9 0.00072 2.5E-08 39.2 3.0 33 30-63 2-37 (71)
103 1gl4_A Nidogen-1, entactin; im 96.9 0.00029 9.9E-09 51.4 1.3 39 29-68 3-45 (285)
104 4aqs_A Laminin subunit beta-1; 96.7 0.00045 1.5E-08 54.3 1.1 51 18-68 464-525 (525)
105 3zyj_B Netrin-G1; cell adhesio 96.6 0.00047 1.6E-08 53.0 0.6 28 37-68 371-398 (426)
106 3k6s_B Integrin beta-2; cell r 96.5 0.0013 4.4E-08 53.5 2.9 52 18-74 450-520 (687)
107 3p5b_L Low density lipoprotein 96.4 0.0012 4.2E-08 49.9 2.0 35 37-75 8-45 (400)
108 2p28_B Integrin beta-2; hybrid 96.2 0.0016 5.5E-08 45.8 1.8 52 18-74 111-181 (217)
109 1klo_A Laminin; glycoprotein; 95.7 0.0066 2.3E-07 40.5 3.0 31 38-68 2-34 (162)
110 1szb_A Mannose binding lectin- 95.5 0.012 4E-07 39.3 3.4 41 24-67 117-166 (170)
111 3m0c_C LDL receptor, low-densi 95.3 0.033 1.1E-06 46.0 6.3 41 32-74 308-356 (791)
112 2jkh_L Factor X light chain; p 95.3 0.015 5E-07 31.7 2.8 38 32-73 2-45 (55)
113 1n7d_A LDL receptor, low-densi 94.9 0.039 1.3E-06 44.7 5.5 30 43-74 306-338 (699)
114 1n7d_A LDL receptor, low-densi 94.5 0.023 8E-07 46.0 3.3 51 9-63 311-364 (699)
115 3m0c_C LDL receptor, low-densi 94.2 0.18 6E-06 41.7 7.7 57 7-68 327-391 (791)
116 4aqs_A Laminin subunit beta-1; 93.8 0.032 1.1E-06 43.8 2.7 50 18-68 423-475 (525)
117 1kli_L Factor VIIA; extrinsic 92.9 0.089 3E-06 30.0 2.9 42 29-73 3-50 (69)
118 3t5o_A Complement component C6 92.8 0.085 2.9E-06 44.2 3.7 40 30-70 496-535 (913)
119 2bz6_L Blood coagulation facto 92.5 0.13 4.4E-06 27.7 3.0 29 44-73 12-44 (53)
120 1nzi_A Complement C1S componen 92.1 0.17 5.7E-06 33.0 3.8 36 29-67 115-157 (159)
121 3u7u_G Neuregulin 1; signaling 91.0 0.26 8.7E-06 26.8 3.2 26 63-89 1-26 (55)
122 1kig_L Factor XA; glycoprotein 90.7 0.1 3.5E-06 27.8 1.4 27 44-72 11-41 (51)
123 1klo_A Laminin; glycoprotein; 88.5 0.081 2.8E-06 35.1 -0.2 48 18-68 80-146 (162)
124 3fby_A COMP, cartilage oligome 87.9 0.36 1.2E-05 38.2 3.1 40 32-71 19-63 (551)
125 1ijq_A LDL receptor, low-densi 86.1 0.66 2.3E-05 33.4 3.6 31 30-62 266-306 (316)
126 1lr7_A Follistatin, FS1; hepar 84.3 1.2 4E-05 25.4 3.4 29 31-59 1-29 (74)
127 2fd6_A Urokinase-type plasmino 83.1 0.42 1.4E-05 30.2 1.2 42 17-68 22-63 (122)
128 2wph_E Coagulation factor IXA 81.9 1.2 4.3E-05 24.2 2.7 25 44-68 12-40 (59)
129 3v64_C Agrin; beta propeller, 81.0 3 0.0001 30.4 5.4 34 32-68 2-40 (349)
130 2e26_A Reelin, reeler protein; 76.7 0.62 2.1E-05 38.1 0.5 48 17-71 521-568 (725)
131 1ob1_C Major merozoite surface 72.3 3 0.0001 25.4 2.6 39 32-70 5-45 (99)
132 3zyj_B Netrin-G1; cell adhesio 70.7 1.6 5.4E-05 33.6 1.4 53 18-70 317-370 (426)
133 1n1i_A Merozoite surface prote 67.2 5.4 0.00018 24.5 3.0 40 32-72 11-52 (105)
134 3v64_C Agrin; beta propeller, 66.0 3.8 0.00013 29.9 2.6 28 32-62 305-334 (349)
135 3sov_A LRP-6, low-density lipo 62.6 8.8 0.0003 27.6 4.0 19 44-62 280-299 (318)
136 4aqt_A Laminin subunit gamma-1 61.0 5.4 0.00018 30.0 2.7 28 43-70 262-289 (375)
137 4aqt_A Laminin subunit gamma-1 58.6 8.3 0.00028 29.0 3.3 16 53-68 334-350 (375)
138 4a0p_A LRP6, LRP-6, low-densit 57.6 8.1 0.00028 30.8 3.3 37 30-68 264-306 (628)
139 3hh2_C Follistatin; protein-pr 57.0 12 0.00042 27.1 3.9 36 24-59 56-91 (288)
140 1nub_A Basement membrane prote 56.9 9 0.00031 26.7 3.1 27 31-57 3-29 (229)
141 2i9a_A Urokinase-type plasmino 55.9 5.7 0.00019 25.7 1.8 41 18-68 35-75 (145)
142 2arp_F Follistatin; cystine kn 55.7 11 0.00039 24.3 3.3 28 32-59 4-31 (152)
143 3f1s_B Vitamin K-dependent pro 54.7 5.3 0.00018 28.3 1.7 34 32-68 3-43 (283)
144 3ojy_A Complement component C8 51.9 10 0.00036 30.0 3.1 38 31-69 464-501 (554)
145 3ojy_B Complement component C8 44.0 16 0.00054 28.8 2.9 37 32-69 447-483 (537)
146 2p26_A Integrin beta-2; hybrid 43.0 9.7 0.00033 27.5 1.5 16 54-69 208-223 (280)
147 3s94_A LRP-6, low-density lipo 42.2 17 0.00057 28.9 2.9 29 31-62 578-608 (619)
148 2y38_A Laminin subunit alpha-5 42.1 20 0.00068 27.3 3.1 17 52-68 356-373 (403)
149 2v73_A CBM40, putative EXO-alp 41.5 80 0.0027 21.4 6.2 41 90-131 35-76 (191)
150 1as5_A Conotoxin Y-PIIIE; neur 41.4 9.3 0.00032 16.8 0.7 11 9-19 13-23 (26)
151 2pe4_A Hyaluronidase-1; hyalur 39.3 14 0.00048 28.3 1.9 19 52-70 396-414 (424)
152 4deq_A Neuropilin-1, vascular 39.2 2.8 9.7E-05 29.1 -1.8 57 4-70 147-203 (218)
153 3s94_A LRP-6, low-density lipo 34.4 43 0.0015 26.6 4.1 25 44-68 285-314 (619)
154 3t3p_B Integrin beta-3; integr 32.4 14 0.00048 28.7 1.0 14 54-67 459-472 (472)
155 3sek_C Follistatin-related pro 32.4 44 0.0015 22.9 3.4 34 25-59 55-88 (209)
156 2e26_A Reelin, reeler protein; 28.8 19 0.00065 29.6 1.2 27 38-68 191-217 (725)
157 1jlp_A PSI-conotoxin PIIIF; mu 28.8 16 0.00056 15.9 0.5 10 9-18 13-22 (26)
158 1nl1_A Prothrombin; hydrolase; 26.6 11 0.00038 24.5 -0.5 29 39-68 61-89 (147)
159 2kgu_A Purotoxin-1; P2X recept 26.5 62 0.0021 15.6 2.4 26 31-57 7-32 (35)
160 4a94_C Carboxypeptidase inhibi 24.5 50 0.0017 16.8 1.9 14 36-49 6-19 (53)
161 1imt_A MIT1, intestinal toxin 24.2 47 0.0016 19.1 2.0 19 38-56 60-78 (80)
162 1b9w_A Protein (merozoite surf 24.1 83 0.0029 18.8 3.1 39 32-70 5-45 (95)
163 4a0p_A LRP6, LRP-6, low-densit 24.1 58 0.002 25.9 3.2 19 44-62 592-610 (628)
164 3v4v_B Integrin beta-7; cell a 23.7 17 0.00057 28.6 0.0 29 41-70 465-496 (503)
165 3b4v_C Follistatin-like 3; lig 21.7 78 0.0027 22.0 3.2 34 25-59 64-97 (237)
166 3g5c_A ADAM 22; alpha/beta fol 20.4 35 0.0012 26.7 1.2 34 33-70 446-483 (510)
No 1
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=99.57 E-value=1.2e-14 Score=111.28 Aligned_cols=100 Identities=26% Similarity=0.476 Sum_probs=77.3
Q ss_pred CcccCCCCCCCCCCCCCCeEeeCCCCceEEeCCC-CccCCcccccCCCCCCCCCCC-CCcceEEecccC----CceeEEE
Q psy11297 26 NLRLEESPCLSHPCQNGATCQDEEDGLFECLCSP-EFTGYLCHTRAPPKLYDTPAF-NGSSHIVMKTLK----AYNKLSI 99 (132)
Q Consensus 26 ~C~~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~-g~~G~~C~~~~~~c~~~~~~~-~g~~~~~~~~~~----~~~~~~i 99 (132)
.|+...+.|.++||.|+|+|++.++ +|+|.|+. +|.|+.|+.... ...| .+++|+.+.... ......+
T Consensus 180 gC~~~~~~C~~~pC~n~g~C~~~~~-~~~C~C~~~~~~G~~C~~~~~-----~~~f~~~~~~~~~~~~~~~~~~~~~~~i 253 (410)
T 3asi_A 180 GCEGPSTTCQEDSCSNQGVCLQQWD-GFSCDCSMTSFSGPLCNDPGT-----TYIFSKGGGQITYKWPPNDRPSTRADRL 253 (410)
T ss_dssp SCCCCSSCCCTTSSSTTCEEEECSS-SEEEECTTTSEESTTSCEECC-----EEEEEEEEEEEEEECCTTCCCCBSEEEE
T ss_pred CCCCCCCCcccccCCCCCEecCCCC-CceEeccCCcccCCCCCCCcc-----cccccCCCceEEEecCCCCCccceeeEE
Confidence 5655567899999999999999986 59999985 999999998652 2234 466788764221 2234589
Q ss_pred EEEEEeCCCCeEEEEeccCCCCCCCeEEEEEcC
Q psy11297 100 EIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132 (132)
Q Consensus 100 ~~~f~t~~~~g~ll~~~~~~~~~~d~~~l~l~~ 132 (132)
+|.|||..++|+|||.+.... ..||++|+|++
T Consensus 254 ~l~frT~~~~GlLl~~~~~~~-~~~~l~l~L~~ 285 (410)
T 3asi_A 254 AIGFSTVQKEAVLVRVDSSSG-LGDYLELHIHQ 285 (410)
T ss_dssp EEEEECCCSEEEEEEEEECTT-CCCEEEEEEET
T ss_pred EEEEEeCCCCEEEEEEecCCC-CCceEEEEEeC
Confidence 999999999999999876422 47999999975
No 2
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=99.49 E-value=2.1e-14 Score=80.67 Aligned_cols=47 Identities=23% Similarity=0.453 Sum_probs=39.2
Q ss_pred CCCcccCCCCCCCCCCCCCCeEe-----eCCCCceEEeCCCCccCCcccccCC
Q psy11297 24 SPNLRLEESPCLSHPCQNGATCQ-----DEEDGLFECLCSPEFTGYLCHTRAP 71 (132)
Q Consensus 24 g~~C~~~~~~C~~~pC~ngg~C~-----~~~~~~~~C~C~~g~~G~~C~~~~~ 71 (132)
|++|+.++++|+++||+|||+|. +..+ +|+|.|++||+|.+||..+.
T Consensus 1 G~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~-~y~C~C~~g~~G~~CE~~v~ 52 (55)
T 3u7u_G 1 GTSHLVKCAEKEKTFCVNGGECFMVKDLSNPS-RYLCKCPNEFTGDRCQNYVM 52 (55)
T ss_dssp --CCEEECCSTTTTTSCTTCEEEEECCC--CC-CEEEEECTTEESTTSCEECC
T ss_pred CCCCcccCCCCcCCCCCCCCCcCCCCccCCCC-CEeEeCCCCCcCCCcCccCc
Confidence 67899999999999999999995 4454 59999999999999998774
No 3
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=99.45 E-value=6.1e-14 Score=119.70 Aligned_cols=93 Identities=27% Similarity=0.455 Sum_probs=44.0
Q ss_pred CCCCCCCCCCCCeEeeCCCCceEEeCCC-CccCCcccccCCCCCCCCCCCCCcceEEecccC---CceeEEEEEEEEeCC
Q psy11297 32 SPCLSHPCQNGATCQDEEDGLFECLCSP-EFTGYLCHTRAPPKLYDTPAFNGSSHIVMKTLK---AYNKLSIEIEFKTNK 107 (132)
Q Consensus 32 ~~C~~~pC~ngg~C~~~~~~~~~C~C~~-g~~G~~C~~~~~~c~~~~~~~~g~~~~~~~~~~---~~~~~~i~~~f~t~~ 107 (132)
++|..+||+|||+|..... .+.|.|+. ||.|++|+..... ..+.|.|.+|+.|+... ......|+|.|||.+
T Consensus 191 ~~~~~~~C~ngg~C~~~~~-~~~C~C~~~g~~G~~Ce~~~~~---~~~~F~G~~~~~y~~~~~~~~~~~~~i~l~FrT~~ 266 (1245)
T 3qcw_A 191 EEGEGGVCLNGGVCSVVDD-QAVCDCSRTGFRGKDCSQGKEE---YIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQ 266 (1245)
T ss_dssp -----------------------------------------C---CEEEECSSCEEEEECTTSCEEESEEEEEEEEECSC
T ss_pred ccCCCCCCCCCCCCccCCC-CceeECCCCCccCCccccCccc---ceeeeCCcEEEEEccccCcccccccEEEEEEEeCC
Confidence 4577789999999998774 59999986 9999999975432 56789999999987543 223568999999999
Q ss_pred CCeEEEEeccCCCCCCCeEEEEEcC
Q psy11297 108 NDGILLYNQQNLDGTGDFVSLAIVN 132 (132)
Q Consensus 108 ~~g~ll~~~~~~~~~~d~~~l~l~~ 132 (132)
++|+|||.+. ..||++|+|++
T Consensus 267 ~~GlLl~~g~----~~d~l~L~L~~ 287 (1245)
T 3qcw_A 267 RNGLMLHTGK----SADYVNLALKN 287 (1245)
T ss_dssp SCEEEEEECS----SSEEEEEEEET
T ss_pred CCceEEEecC----CCCEEEEEEEC
Confidence 9999999976 58999999975
No 4
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=99.43 E-value=4.7e-13 Score=114.32 Aligned_cols=100 Identities=25% Similarity=0.480 Sum_probs=77.4
Q ss_pred CcccCCCCCCCCCCCCCCeEeeCCCCceEEeCC-CCccCCcccccCCCCCCCCCCC-CCcceEEecccC----CceeEEE
Q psy11297 26 NLRLEESPCLSHPCQNGATCQDEEDGLFECLCS-PEFTGYLCHTRAPPKLYDTPAF-NGSSHIVMKTLK----AYNKLSI 99 (132)
Q Consensus 26 ~C~~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~-~g~~G~~C~~~~~~c~~~~~~~-~g~~~~~~~~~~----~~~~~~i 99 (132)
.|....+.|..+||.|+|+|...++ +|.|.|+ ++|+|+.|+.+...+ .| .+++++.|.... .....+|
T Consensus 1012 gC~~~~~~C~~~pC~ngG~C~~~~~-~~~C~C~~~g~~G~~C~~~~~~~-----~f~~~~~~v~y~~~~~~~~~~~~~~i 1085 (1245)
T 3qcw_A 1012 GCEGPSTTCQEDSCSNQGVCLQQWD-GFSCDCSMTSFSGPLCNDPGTTY-----IFSKGGGQITYKWPPNDRPSTRADRL 1085 (1245)
T ss_dssp SSSCCCCCCCTTSSSSSCEEEEETT-EEEEECTTSSCBSTTSCBCCCEE-----EEEEEEEEEEEECCTTCCCCBSEEEE
T ss_pred eeecccCceECCcCCCCCEeCCCCC-CCEEECCCCCCCCCCccCCCceE-----EEcCCCcEEEEecCCCCccccccceE
Confidence 5665567899999999999999996 5999999 699999999865322 23 445777764221 2235689
Q ss_pred EEEEEeCCCCeEEEEeccCCCCCCCeEEEEEcC
Q psy11297 100 EIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132 (132)
Q Consensus 100 ~~~f~t~~~~g~ll~~~~~~~~~~d~~~l~l~~ 132 (132)
+|.|||++++|+|||.++... ..|||+|+|.|
T Consensus 1086 ~l~FrT~~~~g~Ll~~~s~~~-~~~~l~l~l~~ 1117 (1245)
T 3qcw_A 1086 AIGFSTVQKEAVLVRVDSSSG-LGDYLELHIHQ 1117 (1245)
T ss_dssp EEEEEBCCSSEEEEEEEECTT-CCCEEEEEEET
T ss_pred EEEEEEcCCCeEEEEEeccCC-CCceEEEEEEC
Confidence 999999999999999876532 47999999975
No 5
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=99.19 E-value=2.6e-11 Score=63.23 Aligned_cols=38 Identities=37% Similarity=0.929 Sum_probs=34.2
Q ss_pred CCCCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCcccc
Q psy11297 30 EESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHT 68 (132)
Q Consensus 30 ~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~ 68 (132)
++++|.++||.|+|+|++.. ++|+|.|++||+|.+|+.
T Consensus 2 d~d~C~~~pC~ngg~C~~~~-~~~~C~C~~G~~G~~Ce~ 39 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDDI-NSYECWCPFGFEGKNCEL 39 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEET-TEEEEECCTTCCSTTSCC
T ss_pred ccccCCCCCCCCCCEeEcCC-CceEeECCCCCcCCccCC
Confidence 57899999999999999887 469999999999999973
No 6
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.14 E-value=1.2e-10 Score=76.55 Aligned_cols=79 Identities=25% Similarity=0.653 Sum_probs=63.4
Q ss_pred eecCCccCCeecCCCCCCCCcccCCCCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCcccccCCCCCCCCCCCCCcceE
Q psy11297 7 MKRMGCLSASVVQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSHI 86 (132)
Q Consensus 7 ~~~~~~~~~~~cp~~~~g~~C~~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~~~~c~~~~~~~~g~~~~ 86 (132)
+...|=|.. .|+..|.|..|+.++++|..+||.++++|++.. ++|+|.|++||+|..|+.++++|. ..++.+++.++
T Consensus 22 ~~~~g~~~C-~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~-g~~~C~C~~G~~G~~C~~~~~~C~-~~~C~~~g~C~ 98 (135)
T 2vj3_A 22 INTLGSFEC-QCLQGYTGPRCEIDVNECVSNPCQNDATCLDQI-GEFQCICMPGYEGVHCEVNTDECA-SSPCLHNGRCL 98 (135)
T ss_dssp EECSSSEEE-ECCTTEESTTSCEECCTTTTCCCCSSCEEEECS-SCEEEECCTTEESSSSCEECCTTT-TCCSTTTCEEE
T ss_pred ECCCCCEEE-ECCCCCcCCcccccCccCCCCCCCCCCEEeCCC-CCceeeCCCCCcCCcceecCCccc-CCCcCCCCEeE
Confidence 334443333 356666699999889999999999999999987 469999999999999998898887 67888877776
Q ss_pred Ee
Q psy11297 87 VM 88 (132)
Q Consensus 87 ~~ 88 (132)
..
T Consensus 99 ~~ 100 (135)
T 2vj3_A 99 DK 100 (135)
T ss_dssp EC
T ss_pred CC
Confidence 54
No 7
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.11 E-value=8.5e-11 Score=72.42 Aligned_cols=53 Identities=28% Similarity=0.552 Sum_probs=43.7
Q ss_pred cCCCCCCCCcc-cCCCCCCCCCCCCCCeEeeCC-CCceEEeCCCCccCCcccccCCC
Q psy11297 18 VQSSQASPNLR-LEESPCLSHPCQNGATCQDEE-DGLFECLCSPEFTGYLCHTRAPP 72 (132)
Q Consensus 18 cp~~~~g~~C~-~~~~~C~~~pC~ngg~C~~~~-~~~~~C~C~~g~~G~~C~~~~~~ 72 (132)
|+..+. +|+ .++++|.++||.|+|+|++.. .++|+|.|++||+|.+|+.++++
T Consensus 36 C~~G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~ide 90 (91)
T 1tpg_A 36 CNSGRA--QCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTRA 90 (91)
T ss_dssp CSSSCC--BCCEECEEECSSCCSCTTCEEEEESSSSCEEEECCTTCBSSSCCBCSSC
T ss_pred CCCCCc--ccccCcCCcccCCCCCCCCEeecCCCCCCeEeECCCCCcCCcCCcCCCC
Confidence 455553 897 578999999999999999864 13599999999999999987753
No 8
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.08 E-value=3.8e-10 Score=74.45 Aligned_cols=70 Identities=26% Similarity=0.492 Sum_probs=57.8
Q ss_pred ecCCCCCCCCccc------------CCCCCCCCCCCCCCeEee-------CCCCceEEeCCCCccCCcccccCCCCCCCC
Q psy11297 17 VVQSSQASPNLRL------------EESPCLSHPCQNGATCQD-------EEDGLFECLCSPEFTGYLCHTRAPPKLYDT 77 (132)
Q Consensus 17 ~cp~~~~g~~C~~------------~~~~C~~~pC~ngg~C~~-------~~~~~~~C~C~~g~~G~~C~~~~~~c~~~~ 77 (132)
.|+..|.|..|+. .+++|..+||.++++|+. .. ++|+|.|++||.|..|+.++++|. ..
T Consensus 26 ~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~-~~~~C~C~~G~~G~~C~~~i~~C~-~~ 103 (143)
T 4d90_A 26 ECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTF-IGYVCKCPRGFNGIHCQHNINECE-VE 103 (143)
T ss_dssp ECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEE-CCEEEECCTTEESTTSCEECCTTT-TC
T ss_pred ECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCC-CCeEeECcCCCcCCCcccCCCcCC-CC
Confidence 3666667999976 567899999999999993 33 359999999999999998999997 77
Q ss_pred CCCCCcceEEe
Q psy11297 78 PAFNGSSHIVM 88 (132)
Q Consensus 78 ~~~~g~~~~~~ 88 (132)
++.+++.++..
T Consensus 104 ~C~~~~~C~~~ 114 (143)
T 4d90_A 104 PCKNGGICTDL 114 (143)
T ss_dssp CSCTTCEEEEE
T ss_pred CCCCCCEeECC
Confidence 88887777654
No 9
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=99.02 E-value=4.7e-10 Score=62.31 Aligned_cols=41 Identities=29% Similarity=0.650 Sum_probs=34.9
Q ss_pred CCCCCCCC---CCCCCCeEe--eCCCCceEEeCCCCccCCcccccCC
Q psy11297 30 EESPCLSH---PCQNGATCQ--DEEDGLFECLCSPEFTGYLCHTRAP 71 (132)
Q Consensus 30 ~~~~C~~~---pC~ngg~C~--~~~~~~~~C~C~~g~~G~~C~~~~~ 71 (132)
++++|.++ ||+|||+|+ +.. ++|+|.|++||+|.+|+..+.
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~-~~~~C~C~~G~~G~~Ce~~~~ 47 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESL-DSYTCNCVIGYSGDRCQTRDL 47 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSS-SCEEEECCTTCCSSSSCCCSC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCC-CCEEEECCCCCcCCcCCccCc
Confidence 46789887 999999999 555 469999999999999998653
No 10
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=99.02 E-value=3.3e-10 Score=60.84 Aligned_cols=38 Identities=26% Similarity=0.515 Sum_probs=32.1
Q ss_pred CCCCC---CCCCCCeEe--eCCCCceEEeCCCCccCCcccccCC
Q psy11297 33 PCLSH---PCQNGATCQ--DEEDGLFECLCSPEFTGYLCHTRAP 71 (132)
Q Consensus 33 ~C~~~---pC~ngg~C~--~~~~~~~~C~C~~g~~G~~C~~~~~ 71 (132)
+|.++ ||+|+|+|+ +.. ++|+|.|++||+|.+|+.++.
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~-~~~~C~C~~G~~G~~Ce~~~~ 44 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESL-DSYTCNCVIGYSGDRCQTRDL 44 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTT-SSEEEECCTTEETTTTCEECC
T ss_pred CcccCCCCCCCCCCEEEeecCC-CCEEEEcCCCCcCCcCCcccC
Confidence 57777 999999998 444 469999999999999998663
No 11
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.01 E-value=3e-10 Score=74.54 Aligned_cols=57 Identities=26% Similarity=0.599 Sum_probs=48.2
Q ss_pred ecCCCCCCCCcccCCCCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCcccccCCCCC
Q psy11297 17 VVQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKL 74 (132)
Q Consensus 17 ~cp~~~~g~~C~~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~~~~c~ 74 (132)
.|+..|.|..|+.++++|..+||.++++|++.. ++|+|.|++||+|..|+.++++|.
T Consensus 69 ~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~-g~~~C~C~~G~~G~~C~~~i~~C~ 125 (135)
T 2vj3_A 69 ICMPGYEGVHCEVNTDECASSPCLHNGRCLDKI-NEFQCECPTGFTGHLCQVDLHHIL 125 (135)
T ss_dssp ECCTTEESSSSCEECCTTTTCCSTTTCEEEECS-SCEEEECCTTEESSSSCEECC---
T ss_pred eCCCCCcCCcceecCCcccCCCcCCCCEeECCC-CCeEEECCCCCcCCccCccCcccc
Confidence 355566699999889999999999999999987 469999999999999999998875
No 12
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=99.00 E-value=1.3e-10 Score=66.89 Aligned_cols=43 Identities=30% Similarity=0.597 Sum_probs=36.8
Q ss_pred CCCCCCCCCCCCCeEee-----CCCCceEEeCCCCccCCcccccCCCCC
Q psy11297 31 ESPCLSHPCQNGATCQD-----EEDGLFECLCSPEFTGYLCHTRAPPKL 74 (132)
Q Consensus 31 ~~~C~~~pC~ngg~C~~-----~~~~~~~C~C~~g~~G~~C~~~~~~c~ 74 (132)
.++|.++||+|||+|+. .. ++|+|.|++||+|.+|+.+++++.
T Consensus 6 c~~C~~~pC~ngG~C~~~~~~~~~-~~y~C~C~~Gf~G~~Ce~~i~~~~ 53 (63)
T 1hae_A 6 CAEKEKTFCVNGGECFMVKDLSNP-SRYLCKCQPGFTGARCTENVPMKV 53 (63)
T ss_dssp CCHHHHTTSCTTCEEEEEESSSSS-CCEEEECCTTEESTTSCEECCSSC
T ss_pred cCCCCCCcCCCCcEEecCCccCCC-CCEEEECCCCCcCCccCcCcCccc
Confidence 46788999999999996 34 469999999999999999887764
No 13
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=98.89 E-value=1.3e-09 Score=58.82 Aligned_cols=39 Identities=23% Similarity=0.402 Sum_probs=32.3
Q ss_pred CCCCCCC---CCCCCCCeEeeCC-CCceEEeCCCCccCCccccc
Q psy11297 30 EESPCLS---HPCQNGATCQDEE-DGLFECLCSPEFTGYLCHTR 69 (132)
Q Consensus 30 ~~~~C~~---~pC~ngg~C~~~~-~~~~~C~C~~g~~G~~C~~~ 69 (132)
.+++|.+ +||.| |+|.... .++|+|.|++||+|.+|+..
T Consensus 2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~~ 44 (46)
T 1k36_A 2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEHF 44 (46)
T ss_dssp CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCCC
T ss_pred ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCCcc
Confidence 4678888 99999 7999743 13699999999999999864
No 14
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=98.88 E-value=3.9e-10 Score=64.39 Aligned_cols=40 Identities=20% Similarity=0.534 Sum_probs=35.2
Q ss_pred cCCCCCCCCCCCCC--CeEeeCCCCceEEeCCCCcc-CCccccc
Q psy11297 29 LEESPCLSHPCQNG--ATCQDEEDGLFECLCSPEFT-GYLCHTR 69 (132)
Q Consensus 29 ~~~~~C~~~pC~ng--g~C~~~~~~~~~C~C~~g~~-G~~C~~~ 69 (132)
+.+++|.++||.|| |+|++.. ++|+|.|++||+ |.+|+..
T Consensus 9 ~~~d~C~snPC~nga~gtC~~~~-g~y~C~C~~Gy~~G~~C~~~ 51 (61)
T 2k2s_B 9 ETPAACSSNPCGPEAAGTCKETN-SGYICRCNQGYRISLDGTGN 51 (61)
T ss_dssp TSCCHHHHCSSCSSSCCEEEECS-SEEEEECCTTEEEEECSSSC
T ss_pred CCCCcCcCCCCcCCCccccccCC-CceEeECCCCCccCCCCCCC
Confidence 35788999999999 8999987 469999999999 9999753
No 15
>1pz7_A Agrin; structural protein; 1.42A {Gallus gallus} SCOP: b.29.1.4 PDB: 1pz8_A 1pz9_A 1q56_A
Probab=98.85 E-value=5.5e-09 Score=72.87 Aligned_cols=65 Identities=22% Similarity=0.428 Sum_probs=48.8
Q ss_pred CccCCcccccCCCCCCCCCCCCCcceEEecccC-------------C---ceeEEEEEEEEeCCCCeEEEEeccCCCCCC
Q psy11297 60 EFTGYLCHTRAPPKLYDTPAFNGSSHIVMKTLK-------------A---YNKLSIEIEFKTNKNDGILLYNQQNLDGTG 123 (132)
Q Consensus 60 g~~G~~C~~~~~~c~~~~~~~~g~~~~~~~~~~-------------~---~~~~~i~~~f~t~~~~g~ll~~~~~~~~~~ 123 (132)
++.++.|+. ....|+|.+|+.|+... . ....+|+|+|||..++|+|||.+...+ ..
T Consensus 4 ~~e~~~~~~-------~~~~F~G~sy~~~~~~~~~~~~~l~~~~~~~~~~~~~~~is~~frT~~~~GlLl~~g~~~~-~~ 75 (204)
T 1pz7_A 4 IIEKAAGDA-------EAIAFDGRTYMEYHNAVTKSPDALDYPAEPSEKALQSNHFELSIKTEATQGLILWSGKGLE-RS 75 (204)
T ss_dssp ---CTTSSS-------CCEEEESSCCEEEECCSCCC-------CCSSCEEESEEEEEEEEEECCSSEEEEEESCCST-TC
T ss_pred ccccccccc-------cceeECCceeEEEcCcccccccccccccccccccceeEEEEEEEEcCCCCeEEEEeCCCCC-CC
Confidence 456667765 45778999999997542 2 247899999999999999999975322 58
Q ss_pred CeEEEEEcC
Q psy11297 124 DFVSLAIVN 132 (132)
Q Consensus 124 d~~~l~l~~ 132 (132)
||++|+|++
T Consensus 76 dfl~l~L~~ 84 (204)
T 1pz7_A 76 DYIALAIVD 84 (204)
T ss_dssp CEEEEEEET
T ss_pred CeEEEEEEC
Confidence 999999975
No 16
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.84 E-value=3.5e-09 Score=69.75 Aligned_cols=53 Identities=25% Similarity=0.562 Sum_probs=46.4
Q ss_pred ecCCCCCCCCcccCCCCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCcccccC
Q psy11297 17 VVQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRA 70 (132)
Q Consensus 17 ~cp~~~~g~~C~~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~~ 70 (132)
.|+..|.|.+|+.++++|..+||.++++|++.. ++|+|.|++||+|.+|+...
T Consensus 83 ~C~~G~~G~~C~~~i~~C~~~~C~~~~~C~~~~-g~~~C~C~~G~~G~~c~~~~ 135 (143)
T 4d90_A 83 KCPRGFNGIHCQHNINECEVEPCKNGGICTDLV-ANYSCECPGEFMGRNCQYKG 135 (143)
T ss_dssp ECCTTEESTTSCEECCTTTTCCSCTTCEEEEET-TEEEEECCTTCBSTTSCBC-
T ss_pred ECcCCCcCCCcccCCCcCCCCCCCCCCEeECCC-CCeEeECCCCCccCCceecC
Confidence 466667799999899999999999999999987 56999999999999998754
No 17
>3pve_A Agrin, AGRN protein; mRNA splicing, structural genomics, PSI-2, protein structure initiative; 1.40A {Mus musculus}
Probab=98.71 E-value=2.7e-08 Score=68.57 Aligned_cols=57 Identities=44% Similarity=0.653 Sum_probs=45.9
Q ss_pred CCCCCCCcceEEecccCC-----ceeEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEcC
Q psy11297 76 DTPAFNGSSHIVMKTLKA-----YNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132 (132)
Q Consensus 76 ~~~~~~g~~~~~~~~~~~-----~~~~~i~~~f~t~~~~g~ll~~~~~~~~~~d~~~l~l~~ 132 (132)
..+.|.+.+|+.++.... ...++|+|+|||..++|+|||.+...++..||++|+|++
T Consensus 10 ~~~~F~g~syl~~~~~~~~~~~~~~~~~isl~frT~~~~GlLl~~~~~~~~~~d~l~l~L~~ 71 (189)
T 3pve_A 10 FLADFNGFSYLELKGLHTFERDLGEKMALEMVFLARGPSGLLLYNGQKTDGKGDFVSLALHN 71 (189)
T ss_dssp CCEEEESSCEEEECCGGGC-------CEEEEEEEESSSCEEEEEEESCC-CCSCEEEEEEET
T ss_pred eeeEECCCceEEEcCcccccccccceEEEEEEEEeCCCCEEEEEecCCCCCCCCeEEEEEEC
Confidence 457899999999997753 346899999999999999999997544468999999975
No 18
>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A*
Probab=98.69 E-value=2.3e-08 Score=76.69 Aligned_cols=80 Identities=19% Similarity=0.299 Sum_probs=50.7
Q ss_pred CCCCCCCCCCCeEeeCCCCceEEeCCCC-ccCCcccccCCCCCCCCCCCCCcceEEeccc-CCceeEEEEEEEEeCCCCe
Q psy11297 33 PCLSHPCQNGATCQDEEDGLFECLCSPE-FTGYLCHTRAPPKLYDTPAFNGSSHIVMKTL-KAYNKLSIEIEFKTNKNDG 110 (132)
Q Consensus 33 ~C~~~pC~ngg~C~~~~~~~~~C~C~~g-~~G~~C~~~~~~c~~~~~~~~g~~~~~~~~~-~~~~~~~i~~~f~t~~~~g 110 (132)
.|..++|+++++|++.... .+... | ....|.+.+|+.+... ......+|+|+|||..++|
T Consensus 15 ~~~~~~C~~~~~C~p~~~~----~~~~~~~--------------~~~~F~g~~~~~~~f~~~~~~~~~is~~FrT~~~~G 76 (422)
T 1h30_A 15 SQDMDTCEDILPCVPFSVA----KSVKSLY--------------LGRMFSGTPVIRLRFKRLQPTRLVAEFDFRTFDPEG 76 (422)
T ss_dssp ETTTTEEEECCCSSCBCCC----EETTEEE--------------CCC-----CCEEEECCBSSCCCCEEEEEEEECCSSE
T ss_pred ccccCcCCCCCccCCcccc----cCcccce--------------eeeEECCCceEEEEccCCCCCceEEEEEEEeCCCCe
Confidence 3556777777788765422 12221 1 2345666666665321 1255789999999999999
Q ss_pred EEEEeccCCCCCCCeEEEEEcC
Q psy11297 111 ILLYNQQNLDGTGDFVSLAIVN 132 (132)
Q Consensus 111 ~ll~~~~~~~~~~d~~~l~l~~ 132 (132)
+|||.+... ..||++|+|++
T Consensus 77 lLly~~~~~--~~df~~l~L~~ 96 (422)
T 1h30_A 77 ILLFAGGHQ--DSTWIVLALRA 96 (422)
T ss_dssp EEEEEESCT--TSEEEEEEEET
T ss_pred EEEEECCCC--CCcEEEEEEEC
Confidence 999999742 37999999975
No 19
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=98.65 E-value=1.2e-08 Score=56.57 Aligned_cols=35 Identities=20% Similarity=0.544 Sum_probs=29.9
Q ss_pred CCCCCCCCCeEe--eCCCCceEEeCCCCccCCcccccC
Q psy11297 35 LSHPCQNGATCQ--DEEDGLFECLCSPEFTGYLCHTRA 70 (132)
Q Consensus 35 ~~~pC~ngg~C~--~~~~~~~~C~C~~g~~G~~C~~~~ 70 (132)
.++||+|||+|+ +.. ++|+|.|++||+|.+|+..+
T Consensus 10 ~~~pC~nGG~C~~~~~~-~~~~C~C~~GytG~~Ce~~~ 46 (53)
T 1nql_B 10 HDGYCLHDGVCMYIEAL-DKYACNCVVGYIGERCQYRD 46 (53)
T ss_dssp TCCEECTTCEEEEETTT-TEEEEEECTTEESTTSCEEC
T ss_pred CCCCCCCCeEEeeecCC-CCEEEecCCCCcCCCCCcCC
Confidence 368999999998 444 46999999999999999765
No 20
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.63 E-value=2e-08 Score=66.38 Aligned_cols=44 Identities=36% Similarity=0.881 Sum_probs=38.3
Q ss_pred cCCCCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCcccccCCCC
Q psy11297 29 LEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPK 73 (132)
Q Consensus 29 ~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~~~~c 73 (132)
.++++|.++||.|+|+|++.. ++|+|.|++||+|..|+.++++|
T Consensus 45 ~did~C~~~pC~n~g~C~~~~-g~y~C~C~~G~~G~~C~~~~~~c 88 (142)
T 2c4f_L 45 SDGDQCASSPCQNGGSCKDQL-QSYICFCLPAFEGRNCETHKDDQ 88 (142)
T ss_dssp TTCCGGGGCCCCTTCEEEEET-TEEEEECCTTEESTTSCEEGGGC
T ss_pred CccCcCcCCCcCCCCEEeCCC-CCEEeeCCCCccCCccccCcccc
Confidence 367899999999999999987 46999999999999999865543
No 21
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.57 E-value=3.4e-08 Score=72.91 Aligned_cols=44 Identities=34% Similarity=0.755 Sum_probs=29.3
Q ss_pred CCCCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCcccccCCCCC
Q psy11297 30 EESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKL 74 (132)
Q Consensus 30 ~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~~~~c~ 74 (132)
++++|.++||.|+++|.+... +|+|.|++||.|..|+.++++|.
T Consensus 4 d~~~C~~~pC~~~g~C~~~~~-~~~C~C~~g~~g~~C~~~~~eC~ 47 (317)
T 3h5c_B 4 GGSPCISQPCLHNGSCQDSIW-GYTCTCSPGYEGSNCELAKNECH 47 (317)
T ss_dssp --CCTTSCCCTTTCCCCCCSS-SCCCCCSSSCCSSSSCCCSSSCC
T ss_pred cCCcCCCCCCCCCCEeECCCC-CeEEECCCCCcCCccccCcccCC
Confidence 456677777777777776653 47777777777777776666665
No 22
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.55 E-value=6.7e-08 Score=64.23 Aligned_cols=47 Identities=28% Similarity=0.718 Sum_probs=35.9
Q ss_pred CCcccCCCCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCcccccCCCCC
Q psy11297 25 PNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKL 74 (132)
Q Consensus 25 ~~C~~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~~~~c~ 74 (132)
..| .++++|.++||.|+++|++... +|+|.|++||+|..|+.. ++|.
T Consensus 43 ~~c-~dideC~~~pC~n~g~C~~~~~-~y~C~C~~G~~G~~C~~~-deC~ 89 (146)
T 1x7a_L 43 KQY-VDGDQCEPNPCLNGGLCKDDIN-SYECWCQVGFEGKNCELD-ATCN 89 (146)
T ss_dssp --------CCSSCSSCTTCEEEECSS-CEEEECCSSEESTTTCEE-CCTT
T ss_pred ccC-CCcCcCCCCCCCCCCEeECCCC-CEEEecCCCCcCCcCCCC-cccc
Confidence 345 4788999999999999999874 599999999999999865 6665
No 23
>3v64_A Low-density lipoprotein receptor-related protein; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} PDB: 3v65_A
Probab=98.53 E-value=1.7e-07 Score=64.73 Aligned_cols=55 Identities=29% Similarity=0.507 Sum_probs=44.2
Q ss_pred CCCCCCcceEEeccc-------------CCceeEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEcC
Q psy11297 77 TPAFNGSSHIVMKTL-------------KAYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132 (132)
Q Consensus 77 ~~~~~g~~~~~~~~~-------------~~~~~~~i~~~f~t~~~~g~ll~~~~~~~~~~d~~~l~l~~ 132 (132)
...|.|.+|++|+.. +.....+|+|+|||..++|+|||.+...+ ..||++|+|++
T Consensus 4 ~~~F~G~sy~~y~~~~~~~~~~~~~~~~~~~~~~~isl~frT~~~~GlLl~~~~~~~-~~d~l~l~L~~ 71 (191)
T 3v64_A 4 TLAFDGRTYIEYLNAVIESELTNEIPAEKALQSNHFELSLRTEATQGLVLWIGKAAE-RADYMALAIVD 71 (191)
T ss_dssp EEEEESSCCEEEECSCCCHHHHCCCCCCEEESEEEEEEEEECSCSSEEEEEESCCST-TCCEEEEEEET
T ss_pred cceecCceeEEEccccccccccccccccccccceEEEEEEEeCCCCeEEEEeCCCCC-CCcEEEEEEEC
Confidence 356889999998753 23457899999999999999999987432 58999999975
No 24
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=98.51 E-value=4e-08 Score=66.75 Aligned_cols=50 Identities=22% Similarity=0.598 Sum_probs=32.8
Q ss_pred cCCCCCCCCcccCCCCCCC-CCCCCCCeEeeCCCCceEEeCCCCccCCccc
Q psy11297 18 VQSSQASPNLRLEESPCLS-HPCQNGATCQDEEDGLFECLCSPEFTGYLCH 67 (132)
Q Consensus 18 cp~~~~g~~C~~~~~~C~~-~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~ 67 (132)
|+..+.|..|+.++++|.. +||.++|+|++...++|+|.|++||+|.+|+
T Consensus 118 C~~G~~G~~C~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~Ce 168 (169)
T 2vj2_A 118 CETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCE 168 (169)
T ss_dssp ECTTEETTTTCEESCHHHHTCCCCTTCEEEECSTTCEEEECCTTCCSTTSC
T ss_pred CCCCCCCCcccCCCCCCCCCCCCCCCCEEcCCCCCCcEeECCCCCcCcCcC
Confidence 3444457777766667764 6777777777642234777777777777775
No 25
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.49 E-value=1.6e-07 Score=56.42 Aligned_cols=56 Identities=20% Similarity=0.529 Sum_probs=43.1
Q ss_pred cCCCCCCC-CCCCCCCeEeeCCCCceEEeCCCCcc--CCcccccCCCCCCCCCCCCCcceEEe
Q psy11297 29 LEESPCLS-HPCQNGATCQDEEDGLFECLCSPEFT--GYLCHTRAPPKLYDTPAFNGSSHIVM 88 (132)
Q Consensus 29 ~~~~~C~~-~pC~ngg~C~~~~~~~~~C~C~~g~~--G~~C~~~~~~c~~~~~~~~g~~~~~~ 88 (132)
+++++|.. +||.| ++|++.. ++|+|.|++||. |..| +++++|....++.++ .++..
T Consensus 3 ~dideC~~~~~C~~-g~C~n~~-g~y~C~C~~Gy~~~g~~C-~dideC~~~~~C~~~-~C~n~ 61 (82)
T 1emn_A 3 VDMDECKEPDVCKH-GQCINTD-GSYRCECPFGYILAGNEC-VDTDECSVGNPCGNG-TCKNV 61 (82)
T ss_dssp CCCCSSSSTTSCSS-SEECCCS-SCCCEECCTTEEEETTEE-EECCGGGTCCTTSSS-CEEEC
T ss_pred CccccCCCCCCcCC-CEEEecC-CCEEEECCCCeECCCCcc-CCcccccCCCCCCCC-EeECC
Confidence 36789986 89986 7999987 469999999997 8999 568888655667654 45543
No 26
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=98.48 E-value=5.1e-08 Score=53.72 Aligned_cols=34 Identities=26% Similarity=0.625 Sum_probs=28.1
Q ss_pred CCCCCCCCeEeeC---CCCceEEeCCCCccCCccccc
Q psy11297 36 SHPCQNGATCQDE---EDGLFECLCSPEFTGYLCHTR 69 (132)
Q Consensus 36 ~~pC~ngg~C~~~---~~~~~~C~C~~g~~G~~C~~~ 69 (132)
++||+|||+|+.. ..++|+|.|+.||+|.+|+..
T Consensus 13 ~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~~ 49 (52)
T 3ca7_A 13 AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (52)
T ss_dssp HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCEE
T ss_pred CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCccc
Confidence 5699999999962 223599999999999999864
No 27
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.46 E-value=1.9e-08 Score=69.95 Aligned_cols=48 Identities=25% Similarity=0.546 Sum_probs=2.5
Q ss_pred CCcccCCCCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCcccccC-CCCC
Q psy11297 25 PNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRA-PPKL 74 (132)
Q Consensus 25 ~~C~~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~~-~~c~ 74 (132)
..| .++++|.++||.|+|+|++... +|+|.|++||+|..|+..+ ++|.
T Consensus 37 ~~c-~dideC~~~pC~ngg~C~n~~g-~y~C~C~~Gf~G~~Ce~~i~deC~ 85 (195)
T 1nfu_B 37 NKY-KDGDQCETSPCQNQGKCKDGLG-EYTCTCLEGFEGKNCELFTRKLCS 85 (195)
T ss_dssp ----------------------------------------------CCGGG
T ss_pred ccC-CCCcccCCCCCCCCCEeECCCC-CeeEeCCCCceecccccccccccc
Confidence 345 4789999999999999999874 5999999999999999877 6675
No 28
>2h0b_A Neurexin-1-alpha; B-sandwich, cell adhesion; 2.10A {Bos taurus}
Probab=98.43 E-value=4.7e-07 Score=61.84 Aligned_cols=53 Identities=26% Similarity=0.439 Sum_probs=43.4
Q ss_pred CCCCCCCcceEEecccC---CceeEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEcC
Q psy11297 76 DTPAFNGSSHIVMKTLK---AYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132 (132)
Q Consensus 76 ~~~~~~g~~~~~~~~~~---~~~~~~i~~~f~t~~~~g~ll~~~~~~~~~~d~~~l~l~~ 132 (132)
....|.|.+|+.++... .....+|+|+|||..++|+|||.+. ..||++|+|++
T Consensus 6 ~~~~F~G~sy~~~~~~~~~~~~~~~~isl~frT~~~~GlLl~~g~----~~d~l~l~L~~ 61 (184)
T 2h0b_A 6 YIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGK----SADYVNLALKN 61 (184)
T ss_dssp CEEEEESSEEEEEECSSSCEEESEEEEEEEEEESCSCEEEEEECC----TTEEEEEEEET
T ss_pred ceeEECCceEEEEccccCccccCccEEEEEEEeCCCCEEEEEeCC----CCCEEEEEEEC
Confidence 44678999999997543 2246799999999999999999865 58999999975
No 29
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.43 E-value=7e-08 Score=74.34 Aligned_cols=105 Identities=25% Similarity=0.460 Sum_probs=60.6
Q ss_pred cCCCCCCCCcccC------CCCCC-CCCCCCCCeEeeCCCCceEEeCCCCccCCcccccCCCCCCCCCCC-CCcceEEec
Q psy11297 18 VQSSQASPNLRLE------ESPCL-SHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAF-NGSSHIVMK 89 (132)
Q Consensus 18 cp~~~~g~~C~~~------~~~C~-~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~~~~c~~~~~~~-~g~~~~~~~ 89 (132)
|+..+.|.+|+.. ...|. .-+|.|+++|.... .|.|++||+|.+|+...... ..+.+ ....++.++
T Consensus 267 C~~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~----~C~C~~G~~G~~Ce~~~~~~--~~~~~~~~~~~~~c~ 340 (423)
T 2gy5_A 267 CATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQ----GCLCSPGWQGLQCEREGIPR--MTPKIVDLPDHIEVN 340 (423)
T ss_dssp CCBTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCEEETTT----EEECCTTCBSTTSCBCSSCC--CCCEECSCCSBCCEE
T ss_pred eCCCcccccccCccCCCCcCCcccccccCCCCCEecCCC----ceECCCCCcCCCCccCccCC--cCcceecCCCeEEeC
Confidence 4445557777641 11232 12799999998652 49999999999999864321 11221 122222221
Q ss_pred c--------cCCc-eeEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEcC
Q psy11297 90 T--------LKAY-NKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132 (132)
Q Consensus 90 ~--------~~~~-~~~~i~~~f~t~~~~g~ll~~~~~~~~~~d~~~l~l~~ 132 (132)
. .... ....+++.| .+.+|++||.++... .||++|+|++
T Consensus 341 ~g~~g~~C~~~~~~~~~~~~~~~--~~~~G~cl~~~~~~~--~d~ial~l~~ 388 (423)
T 2gy5_A 341 SGKFNPICKASGWPLPTNEEMTL--VKPDGTVLHPKDFNH--TDHFSVAIFT 388 (423)
T ss_dssp SEEECCEEEEECTTCCCGGGEEE--ECTTSCEECCSEEEE--CSSCEEEECC
T ss_pred CCccCCcccccCCcCCCCceEEE--ECCCeEEEeCCCcCc--ccceeeeEEe
Confidence 1 0000 001122222 578999999986533 7999999975
No 30
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=98.42 E-value=1.2e-07 Score=75.54 Aligned_cols=40 Identities=35% Similarity=0.799 Sum_probs=34.0
Q ss_pred CCCCCCCCCCCCCeEeeCCCCceEEeCC-CCccCCcccccC
Q psy11297 31 ESPCLSHPCQNGATCQDEEDGLFECLCS-PEFTGYLCHTRA 70 (132)
Q Consensus 31 ~~~C~~~pC~ngg~C~~~~~~~~~C~C~-~g~~G~~C~~~~ 70 (132)
+++|.++||+|||+|++...++|+|.|+ +||+|.+|+...
T Consensus 1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~~ 41 (587)
T 3nt1_A 1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTPE 41 (587)
T ss_dssp CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCEEC
T ss_pred CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCCch
Confidence 4789999999999999643246999999 999999999853
No 31
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=98.42 E-value=9.6e-08 Score=75.81 Aligned_cols=39 Identities=26% Similarity=0.699 Sum_probs=35.0
Q ss_pred CCCCCCCCCCCCCeEee-CCCCceEEeCC-CCccCCcccccC
Q psy11297 31 ESPCLSHPCQNGATCQD-EEDGLFECLCS-PEFTGYLCHTRA 70 (132)
Q Consensus 31 ~~~C~~~pC~ngg~C~~-~~~~~~~C~C~-~g~~G~~C~~~~ 70 (132)
+++|.++||+|||+|.+ .. ++|+|.|+ .||+|.+||...
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~-~~y~C~C~~~G~~G~~Ce~~~ 42 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGL-DRYQCDCTRTGYSGPNCTIPE 42 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETT-TEEEEECTTSSEETTTTCEEC
T ss_pred CCcCCCCCCCCCCCcCCCCC-CceEeeCCCCCcCCCCCCCCc
Confidence 47899999999999999 76 46999999 999999999865
No 32
>2r16_A Neurexin-1-alpha; beta-sandwich, cell adhesion, splicing; 1.04A {Bos taurus}
Probab=98.41 E-value=4.2e-07 Score=62.20 Aligned_cols=55 Identities=15% Similarity=0.329 Sum_probs=43.7
Q ss_pred CCCCCCCcceEEec--ccCCceeEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEcC
Q psy11297 76 DTPAFNGSSHIVMK--TLKAYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132 (132)
Q Consensus 76 ~~~~~~g~~~~~~~--~~~~~~~~~i~~~f~t~~~~g~ll~~~~~~~~~~d~~~l~l~~ 132 (132)
....|+|.+|+.+. ........+|+|+|||..++|+|||.+... ..||++|+|++
T Consensus 6 ~~~~F~G~sy~~~~~~~~~~~~~~~isl~FrT~~~~GlLl~~~~~~--~~d~l~L~L~~ 62 (182)
T 2r16_A 6 TVLSYDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRD--SADTLRLELDA 62 (182)
T ss_dssp CEEEEESSCCEEEEEEEEEEESEEEEEEEEECSCSSEEEEEEECSS--SCCEEEEEEET
T ss_pred ccEEECCCceEEEECCCcCCccceEEEEEEEECCCCEEEEEeCCCC--CCCEEEEEEEC
Confidence 45678889998764 333455789999999999999999998632 48999999975
No 33
>3sh4_A LG3 peptide; actin disassambly, integrin alpha12 BETA1, metal binding Pro; 1.50A {Homo sapiens} PDB: 3sh5_A
Probab=98.40 E-value=8e-07 Score=61.45 Aligned_cols=56 Identities=21% Similarity=0.362 Sum_probs=43.9
Q ss_pred CCCCCCcceEEecccC-----CceeEEEEEEEEeCCCCeEEEEeccC---CCCCCCeEEEEEcC
Q psy11297 77 TPAFNGSSHIVMKTLK-----AYNKLSIEIEFKTNKNDGILLYNQQN---LDGTGDFVSLAIVN 132 (132)
Q Consensus 77 ~~~~~g~~~~~~~~~~-----~~~~~~i~~~f~t~~~~g~ll~~~~~---~~~~~d~~~l~l~~ 132 (132)
...|.+.+|+.++... .....+|+|+|||..++|+|||.+.. .....||++|+|++
T Consensus 7 ~~~F~G~syl~lp~~~~~~~~~~~~~~is~~frT~~~~GlLl~~~~~~~~~~~~~d~l~l~L~~ 70 (195)
T 3sh4_A 7 GAYFHDDGFLAFPGHVFSRSLPEVPETIELEVRTSTASGLLLWQGVEVGEAGQGKDFISLGLQD 70 (195)
T ss_dssp EEEEEEEEEEEECGGGGCCCSTTCCEEEEEEEEECCSSEEEEEECCCTTCTTSTTCEEEEEEET
T ss_pred cCEECCCEEEEEccccccccccccceEEEEEEEeCCCCcEEEEecccccCCCCCCcEEEEEEeC
Confidence 3568899999998642 12357999999999999999999853 12257999999975
No 34
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.38 E-value=3.9e-08 Score=64.43 Aligned_cols=48 Identities=25% Similarity=0.546 Sum_probs=2.6
Q ss_pred CCcccCCCCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCcccccC-CCCC
Q psy11297 25 PNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRA-PPKL 74 (132)
Q Consensus 25 ~~C~~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~~-~~c~ 74 (132)
..| .++++|.++||.|+|+|++... +|+|.|++||+|..|+..+ ++|.
T Consensus 37 ~~c-~d~d~C~~~pC~n~g~C~~~~~-~y~C~C~~G~~G~~C~~~i~d~C~ 85 (134)
T 2vh0_B 37 NKY-KDGDQCETSPCQNQGKCKDGLG-EYTCTCLEGFEGKNCELFTRKLCS 85 (134)
T ss_dssp ----------------------------------------------CCGGG
T ss_pred ccC-CCcCcCCCCCCCCcCCcccCCC-CEEeeCCCCccCCccccCCCCccc
Confidence 345 3678999999999999999874 5999999999999999877 6675
No 35
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.37 E-value=7.2e-07 Score=71.72 Aligned_cols=75 Identities=17% Similarity=0.348 Sum_probs=58.4
Q ss_pred cCCeecCCCCCC--CCcccCCCCCCCCC--CCCCC---eEeeCCCCceEEe-CCCCccCCccc--------------ccC
Q psy11297 13 LSASVVQSSQAS--PNLRLEESPCLSHP--CQNGA---TCQDEEDGLFECL-CSPEFTGYLCH--------------TRA 70 (132)
Q Consensus 13 ~~~~~cp~~~~g--~~C~~~~~~C~~~p--C~ngg---~C~~~~~~~~~C~-C~~g~~G~~C~--------------~~~ 70 (132)
|....||..|.| ..|+ ++++|..+| |.+++ +|++... +|+|. |++||+|..|+ +++
T Consensus 25 y~C~~C~~GytGdg~~Ce-DiDEC~~~p~~C~~gg~~~~CvNt~g-sY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~di 102 (634)
T 1yo8_A 25 WSCGFCPVGFLGNGTHCE-DLDECALVPDICFSTSKVPRCVNTQP-GFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPE 102 (634)
T ss_dssp EEECCCCTTBCSCSSSCC-BCCTTTTSCCCSCCCSSSCCEEECSS-SEEECCCCTTEEECCCEESSSHHHHSCCCCEEEC
T ss_pred eECCcCCCccCCCCCCcc-ccccccCCCCcccCCccccceeeccC-ceecccCCCCcccCccccccccccccCCCccccc
Confidence 443356777767 7996 889999988 99999 9999874 59999 99999998875 567
Q ss_pred CCCCC-CCCCCCCcceEEec
Q psy11297 71 PPKLY-DTPAFNGSSHIVMK 89 (132)
Q Consensus 71 ~~c~~-~~~~~~g~~~~~~~ 89 (132)
++|.. ..+|.++..++...
T Consensus 103 deC~~~~~pC~~~~~Cvnt~ 122 (634)
T 1yo8_A 103 NPCKDKTHNCHKHAECIYLG 122 (634)
T ss_dssp CTTTTTCCCCCTTEEEEECC
T ss_pred ccccCCCcccccCccccccc
Confidence 88863 25788777777654
No 36
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=98.36 E-value=1.1e-06 Score=67.01 Aligned_cols=52 Identities=35% Similarity=0.657 Sum_probs=44.8
Q ss_pred CCCC-CcceEEecccCCceeEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEcC
Q psy11297 78 PAFN-GSSHIVMKTLKAYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132 (132)
Q Consensus 78 ~~~~-g~~~~~~~~~~~~~~~~i~~~f~t~~~~g~ll~~~~~~~~~~d~~~l~l~~ 132 (132)
..|. +.+|++++.++....++|+|+|||..++|+|||.+.. ..||++|+|++
T Consensus 8 v~F~~~~Syl~~p~~~~~~~~~is~~frT~~~~GlLly~~~~---~~dfi~l~L~~ 60 (410)
T 3asi_A 8 VTFKTKSSYVALATLQAYTSMHLFFQFKTTSLDGLILYNSGD---GNDFIVVELVK 60 (410)
T ss_dssp EEECSTTCEEEESCCCCSSCEEEEEEEECSCSCEEEEEEEBS---TTCEEEEEEET
T ss_pred cEeCCCCeeEEeCCCCCCceEEEEEEEEeCCCCeEEEEeCCC---CCCEEEEEEEC
Confidence 4564 6799999988887889999999999999999998752 58999999975
No 37
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=98.35 E-value=1.1e-07 Score=53.56 Aligned_cols=33 Identities=27% Similarity=0.641 Sum_probs=27.1
Q ss_pred CCCCCCeEeeC---CCCceEEeCCCCccCCcccccC
Q psy11297 38 PCQNGATCQDE---EDGLFECLCSPEFTGYLCHTRA 70 (132)
Q Consensus 38 pC~ngg~C~~~---~~~~~~C~C~~g~~G~~C~~~~ 70 (132)
||+|||+|... ..+.|.|.|++||+|.+||...
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~~ 50 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYKE 50 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEEC
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcccC
Confidence 99999999832 2235999999999999999754
No 38
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.35 E-value=2e-07 Score=59.34 Aligned_cols=44 Identities=27% Similarity=0.650 Sum_probs=35.2
Q ss_pred CCCCCCCCC--------CCCCCeEeeCCCCceEEeCCCCccCCcccccCC--CCC
Q psy11297 30 EESPCLSHP--------CQNGATCQDEEDGLFECLCSPEFTGYLCHTRAP--PKL 74 (132)
Q Consensus 30 ~~~~C~~~p--------C~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~~~--~c~ 74 (132)
++++|..+| |.++|+|++... +|+|.|++||+|..|+...+ +|.
T Consensus 5 d~d~C~~~p~~~~C~~~C~~~g~C~~~~~-~y~C~C~~G~~G~~C~~~~~~~~C~ 58 (114)
T 1aut_L 5 DGDQCLVLPLEHPCASLCCGHGTCIDGIG-SFSCDCRSGWEGRFCQREVSFLNCS 58 (114)
T ss_dssp ---CCCCCSSCCSSSSTTTTSEEECCCSS-CCCEEECTTEESTTSCEECCSSSSS
T ss_pred ecccccCCCccccccccCCCcCCCCCCCC-CcEeeCCCCCcCCCcCcCCcCCcCc
Confidence 567888888 999999998874 59999999999999987654 553
No 39
>1d2s_A SHBG, sex hormone-binding globulin; steroid transport, laminin G-like domain, jellyroll, androgen binding protein (ABP); HET: DHT; 1.55A {Homo sapiens} SCOP: b.29.1.4 PDB: 1kdk_A* 1kdm_A*
Probab=98.32 E-value=1e-06 Score=59.66 Aligned_cols=50 Identities=20% Similarity=0.339 Sum_probs=39.2
Q ss_pred CCCc--ceEEecccCCceeEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEcC
Q psy11297 80 FNGS--SHIVMKTLKAYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132 (132)
Q Consensus 80 ~~g~--~~~~~~~~~~~~~~~i~~~f~t~~~~g~ll~~~~~~~~~~d~~~l~l~~ 132 (132)
|.+. +|+.|+.... ...+|+|+|||..++|+|||.+... ..||++|+|+|
T Consensus 10 F~g~s~~~l~f~~~~~-~~~~is~~FrT~~~~GlLly~~~~~--~~df~~l~L~~ 61 (170)
T 1d2s_A 10 PGQEPIAVMTFDLTKI-TKTSSSFEVRTWDPEGVIFYGDTNP--KDDWFMLGLRD 61 (170)
T ss_dssp TCCSCSEEEEEEGGGC-CCCEEEEEEEESCSSEEEEEEEEET--TTEEEEEEEET
T ss_pred CCCCceEEEEecCCCC-CceEEEEEEEeCCCCEEEEEecCCC--CCCEEEEEEeC
Confidence 4444 4677775554 5679999999999999999998742 37999999975
No 40
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.30 E-value=3.7e-09 Score=76.64 Aligned_cols=49 Identities=6% Similarity=-0.002 Sum_probs=41.9
Q ss_pred CCCCcccCCCCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCcccccCCCC
Q psy11297 23 ASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPK 73 (132)
Q Consensus 23 ~g~~C~~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~~~~c 73 (132)
.|.+|+.. ++|++.||.|+|+|++... +|+|.|+.||+|.+|+.++++|
T Consensus 92 ~G~~c~~~-~eC~s~pC~ngG~C~~~~~-sy~C~C~~Gf~G~~Ce~~~d~C 140 (267)
T 4fbr_A 92 LGARDKQN-IVAVSIKSNDGGKTLTGTT-TYNGEGPIGFKSEVTDGDTYSV 140 (267)
T ss_dssp CCCCSSCC-EEEEEEECSSTTSEEEEEE-EETTSCCEEEEEEECCCCEEEE
T ss_pred ccCccccc-cccCCCCCCCCCEEecCCc-cEEeeCCCCccccCCCCCcccc
Confidence 47777654 4799999999999999874 6999999999999999988774
No 41
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.29 E-value=1.7e-07 Score=64.31 Aligned_cols=78 Identities=13% Similarity=0.189 Sum_probs=56.4
Q ss_pred eecCCccCCeecCCCCCCC---CcccCCCCCC----CCCCCCCCeEeeCCC----CceEEeCCCCccCCcccccCCCCCC
Q psy11297 7 MKRMGCLSASVVQSSQASP---NLRLEESPCL----SHPCQNGATCQDEED----GLFECLCSPEFTGYLCHTRAPPKLY 75 (132)
Q Consensus 7 ~~~~~~~~~~~cp~~~~g~---~C~~~~~~C~----~~pC~ngg~C~~~~~----~~~~C~C~~g~~G~~C~~~~~~c~~ 75 (132)
....|-|... |+..|.|. .|+ ++++|. .+||.++++|++... ++|+|.|++||+|..++-.+++|.
T Consensus 19 ~~~~g~~~C~-C~~G~~g~~~~~C~-~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~~d~C~- 95 (186)
T 1z1y_A 19 VQMSNHFXCM-CNEGLVHLSENTCE-EXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQ- 95 (186)
T ss_dssp EECSSCEEEE-ECTTEEEEETTEEE-ECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEEEEGGGT-
T ss_pred ECCCCCeEeE-CCCCCccCCCCccC-CCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCCCCcCc-
Confidence 3344444443 45555466 786 679999 789999999999872 469999999999986544467786
Q ss_pred CCCCCCCcceEE
Q psy11297 76 DTPAFNGSSHIV 87 (132)
Q Consensus 76 ~~~~~~g~~~~~ 87 (132)
..++.+++.++.
T Consensus 96 ~~~C~~~g~C~~ 107 (186)
T 1z1y_A 96 YXNCGESGECIV 107 (186)
T ss_dssp TCCCCTTEEEEE
T ss_pred CCCCCCCCEEee
Confidence 567877777763
No 42
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.29 E-value=3e-07 Score=60.52 Aligned_cols=61 Identities=15% Similarity=0.388 Sum_probs=46.1
Q ss_pred CCcccCCCCCCCC---CCCCCCeEeeCCCCceEEeCCCCccCC------------cccccCCCCCC-CCCCCCCcceEEe
Q psy11297 25 PNLRLEESPCLSH---PCQNGATCQDEEDGLFECLCSPEFTGY------------LCHTRAPPKLY-DTPAFNGSSHIVM 88 (132)
Q Consensus 25 ~~C~~~~~~C~~~---pC~ngg~C~~~~~~~~~C~C~~g~~G~------------~C~~~~~~c~~-~~~~~~g~~~~~~ 88 (132)
..|+ ++++|... ||.++++|++... +|+|.|++||.|. .|+ ++++|.. ..++.++..++..
T Consensus 39 ~~C~-dideC~~~~~~~C~~~~~C~n~~g-~y~C~C~~Gy~g~~~~~~~~~~~~~~C~-dideC~~~~~~C~~~~~C~n~ 115 (143)
T 2bou_A 39 ETCD-DINECATLSKVSCGKFSDCWNTEG-SYDCVCSPGYEPVSGAKTFKNESENTCQ-DVDECSSGQHQCDSSTVCFNT 115 (143)
T ss_dssp CCCE-ECCGGGC----CCCTTEEEEECSS-CEEEEECTTEEETTCCSCBSSGGGCCEE-ECCHHHHTCCCCCTTSEEEEC
T ss_pred CcCC-ccccccCCCCCCCCCCCEEEcCCC-CeEeECCCCcccCcCccccccCCCCCcC-CccCccCcCCCCCCCCEEECC
Confidence 6884 78999875 9999999999874 6999999999987 454 5677752 3567666666654
No 43
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.24 E-value=7.4e-07 Score=53.43 Aligned_cols=56 Identities=23% Similarity=0.478 Sum_probs=42.4
Q ss_pred EeecCCccCCeecCCCCC--CCCcccCCCCCC-CCCCCCCCeEeeCCCCceEEeCCCCccCCc
Q psy11297 6 RMKRMGCLSASVVQSSQA--SPNLRLEESPCL-SHPCQNGATCQDEEDGLFECLCSPEFTGYL 65 (132)
Q Consensus 6 ~~~~~~~~~~~~cp~~~~--g~~C~~~~~~C~-~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~ 65 (132)
+++..|-|.. .|+..|. |..| +++++|. .+||.| ++|++.. ++|+|.|++||.|..
T Consensus 19 C~n~~g~y~C-~C~~Gy~~~g~~C-~dideC~~~~~C~~-~~C~n~~-g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 19 CINTDGSYRC-ECPFGYILAGNEC-VDTDECSVGNPCGN-GTCKNVI-GGFECTCEEGFEPGP 77 (82)
T ss_dssp ECCCSSCCCE-ECCTTEEEETTEE-EECCGGGTCCTTSS-SCEEECS-SSEEECCSSSSCCCS
T ss_pred EEecCCCEEE-ECCCCeECCCCcc-CCcccccCCCCCCC-CEeECCC-CCEEeECCCCeEeCC
Confidence 4455565665 4666664 8889 4789997 789987 5999987 469999999998743
No 44
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.22 E-value=1.6e-06 Score=69.73 Aligned_cols=56 Identities=32% Similarity=0.681 Sum_probs=44.5
Q ss_pred CCCCCCCCCCCCCCeEeeCCCCceEE-eCCCCccC--CcccccCCCCCCCCC--CCCCc---ceEE
Q psy11297 30 EESPCLSHPCQNGATCQDEEDGLFEC-LCSPEFTG--YLCHTRAPPKLYDTP--AFNGS---SHIV 87 (132)
Q Consensus 30 ~~~~C~~~pC~ngg~C~~~~~~~~~C-~C~~g~~G--~~C~~~~~~c~~~~~--~~~g~---~~~~ 87 (132)
++++|.++||.++++|++...++|+| .|++||+| ..|+ ++++|. ..+ |.++. .++.
T Consensus 2 DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~Ce-DiDEC~-~~p~~C~~gg~~~~CvN 65 (634)
T 1yo8_A 2 DPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCE-DLDECA-LVPDICFSTSKVPRCVN 65 (634)
T ss_dssp --CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCC-BCCTTT-TSCCCSCCCSSSCCEEE
T ss_pred cccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCCCcc-cccccc-CCCCcccCCccccceee
Confidence 57889999999999999987545999 99999998 8997 788896 445 77765 5554
No 45
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=98.20 E-value=6.3e-07 Score=59.93 Aligned_cols=41 Identities=22% Similarity=0.566 Sum_probs=35.0
Q ss_pred CCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCcccccCCCCC
Q psy11297 32 SPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKL 74 (132)
Q Consensus 32 ~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~~~~c~ 74 (132)
++|.++||.++|+|++..+ +|+|.|++||.|..||... +|.
T Consensus 120 ~~c~~~~C~~~g~C~~~~~-~~~c~C~~g~~G~~Ce~~~-~c~ 160 (162)
T 1g1s_A 120 ASCQDMSCSKQGECLETIG-NYTCSCYPGFYGPECEYVR-DDD 160 (162)
T ss_dssp CCCCTTGGGGSEEEEECSS-SEEEEECTTEESTTSCEEC-C--
T ss_pred CCCcCCCCCCCCEEecCCC-CceEeCCCCCcCcccccCc-ccC
Confidence 5799999999999999985 5999999999999999864 563
No 46
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.19 E-value=4.4e-07 Score=62.25 Aligned_cols=69 Identities=10% Similarity=0.135 Sum_probs=52.5
Q ss_pred cCCCCCCCCcccCCCCCCCCCCCCCCeEe----eCCCCceEEeCCCCccC-----Cccccc-CCCCCCCCCC-CCCcceE
Q psy11297 18 VQSSQASPNLRLEESPCLSHPCQNGATCQ----DEEDGLFECLCSPEFTG-----YLCHTR-APPKLYDTPA-FNGSSHI 86 (132)
Q Consensus 18 cp~~~~g~~C~~~~~~C~~~pC~ngg~C~----~~~~~~~~C~C~~g~~G-----~~C~~~-~~~c~~~~~~-~~g~~~~ 86 (132)
|+..|.|..++-.+++|..+||.++++|+ +.. ++|+|.|++||.| ..|+.. .++|. .++ .+++.++
T Consensus 78 C~~G~~g~~~~C~~d~C~~~~C~~~g~C~~~~~~~~-g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~--~~C~~~~~~C~ 154 (186)
T 1z1y_A 78 CIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEI-QSAGCSCAIGXVPNPEDEXXCTXTGETACQ--LXCNTDNEVCX 154 (186)
T ss_dssp ECTTEEEETTEEEEGGGTTCCCCTTEEEEEEEETTE-EEEEEEECTEEEEETTTTTEEEEEECCCCC--CCCCTTTEEEE
T ss_pred CCCCCccCCCCCCCCcCcCCCCCCCCEEeeCCcCCC-CCceEECCCCCcccCCCCCcceEcCCCccc--ccccccCccee
Confidence 55555577665447899999999999999 444 4699999999998 889864 67785 477 6777666
Q ss_pred Eec
Q psy11297 87 VMK 89 (132)
Q Consensus 87 ~~~ 89 (132)
...
T Consensus 155 n~~ 157 (186)
T 1z1y_A 155 NVE 157 (186)
T ss_dssp EET
T ss_pred cCC
Confidence 543
No 47
>2r1b_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 1.72A {Rattus norvegicus} PDB: 3mw2_A* 3b3q_E* 3mw3_A*
Probab=98.18 E-value=3e-06 Score=59.73 Aligned_cols=54 Identities=22% Similarity=0.340 Sum_probs=38.9
Q ss_pred CCCC-CcceEEecccC----CceeEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEcC
Q psy11297 78 PAFN-GSSHIVMKTLK----AYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132 (132)
Q Consensus 78 ~~~~-g~~~~~~~~~~----~~~~~~i~~~f~t~~~~g~ll~~~~~~~~~~d~~~l~l~~ 132 (132)
..|. +.+|+.|...+ .....+|+|.|||..++|+|||.+.... ..||++|+|++
T Consensus 13 ~~F~~g~s~l~y~~~~~~~~~~~~~~isl~FrT~~~~GlLly~~~~~~-~~dfi~LeL~~ 71 (220)
T 2r1b_A 13 YIFSKGGGQITYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSSSG-LGDYLELHIHQ 71 (220)
T ss_dssp EEEEEEEEEEEEECCGGGCCCBSEEEEEEEEECCCSSEEEEEEEESTT-CCCEEEEEEET
T ss_pred EEECCCCeEEEEECCCCCcccccCcEEEEEEEeCCCCEEEEEecCCCC-CCCeEEEEEEC
Confidence 4564 45788764322 2335589999999999999999665322 58999999975
No 48
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.16 E-value=1.5e-06 Score=53.20 Aligned_cols=60 Identities=13% Similarity=0.258 Sum_probs=47.8
Q ss_pred cCCCCCCCCcccCCCCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCccc-ccCCCCCCCCCCCCCcceEEec
Q psy11297 18 VQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCH-TRAPPKLYDTPAFNGSSHIVMK 89 (132)
Q Consensus 18 cp~~~~g~~C~~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~-~~~~~c~~~~~~~~g~~~~~~~ 89 (132)
|+..+.|..|+ +++|...||.|+ . ++|+|.|++||+ .|+ .++++|. +.++.+++.++...
T Consensus 6 C~~g~~g~~c~--~~~c~~~pC~n~------~-~~y~C~C~~G~~--~C~~~~~~~C~-~~pC~ngg~C~~~~ 66 (91)
T 1tpg_A 6 CRDEKTQMIYQ--QHQSWLRPVLRS------N-RVEYCWCNSGRA--QCHSVPVKSCS-EPRCFNGGTCQQAL 66 (91)
T ss_dssp CBCSSSCCBCC--SSCEEEEECSSS------S-CEEEEECSSSCC--BCCEECEEECS-SCCSCTTCEEEEES
T ss_pred CCCCCcCCeEC--CCcccCCccccC------C-CCcEeECCCCCc--ccccCcCCccc-CCCCCCCCEeecCC
Confidence 45556688884 688999998876 2 469999999998 898 5788887 78899998888754
No 49
>1f5f_A SHBG, sex hormone-binding globulin; jellyroll, signaling protein; HET: DHT; 1.70A {Homo sapiens} SCOP: b.29.1.4 PDB: 1lhw_A* 1lho_A* 1lhn_A* 1lhv_A* 1lhu_A*
Probab=98.15 E-value=4.2e-06 Score=58.20 Aligned_cols=46 Identities=22% Similarity=0.399 Sum_probs=37.3
Q ss_pred ceEEecccCCceeEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEcC
Q psy11297 84 SHIVMKTLKAYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132 (132)
Q Consensus 84 ~~~~~~~~~~~~~~~i~~~f~t~~~~g~ll~~~~~~~~~~d~~~l~l~~ 132 (132)
+|+.++.... ...+|+|.|||..++|+|||.+... ..||++|+|+|
T Consensus 28 ~y~~~~~~~~-~~~~is~~frT~~~~GlLly~~~~~--~~d~~~l~L~~ 73 (205)
T 1f5f_A 28 AVMTFDLTKI-TKTSSSFEVRTWDPEGVIFYGDTNP--KDDWFMLGLRD 73 (205)
T ss_dssp EEEEEEGGGC-CCCEEEEEEEESCSSEEEEEEEEET--TTEEEEEEEET
T ss_pred EEEEECCCCC-CceEEEEEEEeCCCCEEEEEeCCCC--CCCEEEEEEEC
Confidence 7788875443 3479999999999999999998742 26999999975
No 50
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=98.15 E-value=1e-06 Score=53.18 Aligned_cols=42 Identities=26% Similarity=0.612 Sum_probs=35.1
Q ss_pred CCCCCCCCC--CCCCCeEeeCCCCceEEeCCCCcc-----CCcccccCCCCC
Q psy11297 30 EESPCLSHP--CQNGATCQDEEDGLFECLCSPEFT-----GYLCHTRAPPKL 74 (132)
Q Consensus 30 ~~~~C~~~p--C~ngg~C~~~~~~~~~C~C~~g~~-----G~~C~~~~~~c~ 74 (132)
++++|+.+| |.++ +|++.. ++|+|.|++||. |..|+ ++++|.
T Consensus 2 dideC~~~~~~C~~g-~C~n~~-g~y~C~C~~Gy~~~~~~g~~C~-dideC~ 50 (86)
T 1lmj_A 2 DIDECRISPDLCGRG-QCVNTP-GDFECKCDEGYESGFMMMKNCM-DIDECQ 50 (86)
T ss_dssp CCCTTTTCSSTTTTS-CEEEET-TEEEECCCSSEEECTTTSSSEE-ECCHHH
T ss_pred ccccccCCCCCCCCC-EEECCC-CCEEeeCCCCcCccCCCCCccC-Cccccc
Confidence 678998876 9765 999988 469999999997 78896 788885
No 51
>2r1d_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 2.60A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3biw_E*
Probab=98.14 E-value=5.1e-06 Score=58.83 Aligned_cols=53 Identities=21% Similarity=0.284 Sum_probs=39.2
Q ss_pred CCCCCcceEEecccC----CceeEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEcC
Q psy11297 78 PAFNGSSHIVMKTLK----AYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132 (132)
Q Consensus 78 ~~~~g~~~~~~~~~~----~~~~~~i~~~f~t~~~~g~ll~~~~~~~~~~d~~~l~l~~ 132 (132)
..|.+ +|+.|...+ .....+|+|.|||..++|+|||.++... ..||++|+|++
T Consensus 43 f~~~g-s~i~y~~~~~~~~~~~~~~isl~FrT~~~~GlLl~~~~~~~-~~dfi~L~L~~ 99 (226)
T 2r1d_A 43 FSKGG-GQITYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSSSG-LGDYLELHIHQ 99 (226)
T ss_dssp EEEEE-EEEEEECCGGGCCCBSEEEEEEEEECCCSSEEEEEEEECTT-CCCEEEEEEET
T ss_pred EecCC-cEEEEECCccccccccccEEEEEEEeCCCCEEEEEecCCCC-CCCEEEEEEEC
Confidence 44566 888765332 2345689999999999999999764322 58999999975
No 52
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.12 E-value=5.7e-07 Score=54.51 Aligned_cols=47 Identities=23% Similarity=0.559 Sum_probs=38.4
Q ss_pred CCCCCCCCC--CCCCCeEeeCCCCceEEeCCCCcc----CCcccccCCCCCCCCCCC
Q psy11297 30 EESPCLSHP--CQNGATCQDEEDGLFECLCSPEFT----GYLCHTRAPPKLYDTPAF 80 (132)
Q Consensus 30 ~~~~C~~~p--C~ngg~C~~~~~~~~~C~C~~g~~----G~~C~~~~~~c~~~~~~~ 80 (132)
++++|+.+| | ++++|++.. ++|+|.|++||. |..|+ ++++|. ..++.
T Consensus 2 dideC~~~~~~C-~~~~C~n~~-g~y~C~C~~G~~~~~~g~~C~-dideC~-~~~C~ 54 (87)
T 1z6c_A 2 DVDECSLKPSIC-GTAVCKNIP-GDFECECPEGYRYNLKSKSCE-DIDECS-ENMCA 54 (87)
T ss_dssp CSCSSSSSSSSB-TTSSCCCBT-TBCCCSSSTTCEEETTTTEEE-CCCHHH-HSCCS
T ss_pred ccccccCCCCCC-CCCEeECCC-CCEEEECCCCceECCCCCcCC-CcCeeC-CCCCC
Confidence 578999888 8 789999987 469999999998 88995 788875 44553
No 53
>3bod_A Neurexin-1-alpha; neurexin1D, LNS6, alternative splicing, calcium, cell adhesion, EGF-like domain, glycoprotein, membrane, metal- binding; 1.70A {Mus musculus} PDB: 2vh8_C 2xb6_C* 2wqz_C* 1c4r_A 3bop_A 3mw4_A*
Probab=98.11 E-value=8.4e-06 Score=55.47 Aligned_cols=54 Identities=24% Similarity=0.380 Sum_probs=39.1
Q ss_pred CCCC-CcceEEecccC----CceeEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEcC
Q psy11297 78 PAFN-GSSHIVMKTLK----AYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132 (132)
Q Consensus 78 ~~~~-g~~~~~~~~~~----~~~~~~i~~~f~t~~~~g~ll~~~~~~~~~~d~~~l~l~~ 132 (132)
..|. +.+|+.+.... .....+|+|+|||..++|+|||..+.. +..||++|+|++
T Consensus 7 ~~F~~~~s~l~y~~~~~~~~~~~~~~isl~FrT~~~~GlLl~~~~~~-~~~dfi~l~L~~ 65 (178)
T 3bod_A 7 YIFSKGGGQITYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSSS-GLGDYLELHIHQ 65 (178)
T ss_dssp EEEEEEEEEEEEECCTTSCCCBSEEEEEEEEECCCSSEEEEEEEESS-SSCCEEEEEEET
T ss_pred EEECCCCcEEEEECCCcCCCCccccEEEEEEEECCCCEEEEEEcCCC-CCCCEEEEEEEC
Confidence 3453 45787764332 234678999999999999999975322 258999999975
No 54
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.10 E-value=9.2e-08 Score=69.34 Aligned_cols=79 Identities=10% Similarity=0.011 Sum_probs=62.0
Q ss_pred eeEeecCCccCCeecCC--CCCCCCcccCCCCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCcccccCCC------CCC
Q psy11297 4 LVRMKRMGCLSASVVQS--SQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPP------KLY 75 (132)
Q Consensus 4 ~~~~~~~~~~~~~~cp~--~~~g~~C~~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~~~~------c~~ 75 (132)
.-.+++.|-+++--.|+ -++|.++++.+..+.. +|.|+|+|++... +|+|.|++||+|.+|+..+++ |.
T Consensus 4 ~~~~n~~Gg~s~~~~pgg~~~~g~~~~~n~~~~~~-~c~ngG~C~~g~~-~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~- 80 (267)
T 4fbr_A 4 YLVQNQWGGSQATWNPGGLWLIGARDKQNVVALDI-KSDDGGKTLKGTM-TYNGEGPIGFRGTLSSANNYTVENQWGGT- 80 (267)
T ss_dssp EEEEEECSSTTSCCEEEEEEECCCCSSCCEEEEEE-ECSSTTSEEEEEE-EETTSCCEEEEEEECSTTEEEEEEESSST-
T ss_pred eeEeecCCcccCCcCCCCceeeccccccccccCCC-CcCCCCeecCCCC-CeEEeCCCCcccccccccccccccccCcC-
Confidence 34578888888877776 1348888877766665 8899999999874 699999999999999998887 44
Q ss_pred CCCCCCCcce
Q psy11297 76 DTPAFNGSSH 85 (132)
Q Consensus 76 ~~~~~~g~~~ 85 (132)
+.|+.+++.+
T Consensus 81 s~pC~nggtc 90 (267)
T 4fbr_A 81 SAPWQPGGVW 90 (267)
T ss_dssp TSCEEEEEEE
T ss_pred CCcccCCCee
Confidence 6666666554
No 55
>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A
Probab=98.07 E-value=1.8e-05 Score=59.97 Aligned_cols=49 Identities=33% Similarity=0.569 Sum_probs=38.2
Q ss_pred CcceEEec--ccCCceeEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEcC
Q psy11297 82 GSSHIVMK--TLKAYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132 (132)
Q Consensus 82 g~~~~~~~--~~~~~~~~~i~~~f~t~~~~g~ll~~~~~~~~~~d~~~l~l~~ 132 (132)
..+|+.++ ........+|+|+|||..++|+|||.+... ..||++|+|++
T Consensus 42 ~~s~~~~~~~~~~~~~~~~is~~frT~~~~GlLly~~~~~--~~dfi~l~L~~ 92 (394)
T 1dyk_A 42 RNSHIAIAFDDTKVKNRLTIELEVRTEAESGLLFYMARIN--HADFATVQLRN 92 (394)
T ss_dssp TTCEEEEECCGGGGSSEEEEEEEEEECCSCEEEEEEECTT--SSSEEEEEEET
T ss_pred CCcEEEEEcCccccccceEEEEEEEeCCCCeEEEEcCCCC--CCceEEEEEEC
Confidence 35666654 334456889999999999999999998642 47999999975
No 56
>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus}
Probab=98.07 E-value=1.4e-05 Score=60.28 Aligned_cols=50 Identities=18% Similarity=0.423 Sum_probs=40.1
Q ss_pred CCcceEEeccc--CCceeEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEcC
Q psy11297 81 NGSSHIVMKTL--KAYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132 (132)
Q Consensus 81 ~g~~~~~~~~~--~~~~~~~i~~~f~t~~~~g~ll~~~~~~~~~~d~~~l~l~~ 132 (132)
.+.+|+.++.. .....++|+|+|||..++|+|||.+... ..||++|+|++
T Consensus 27 ~~~S~~~~~~~~~~~~~~~~is~~frT~~~~GlLly~~~~~--~~d~~~l~L~~ 78 (383)
T 2jd4_A 27 SQNSHLVLPLQQSDVRKRLQVQLSIRTFASSGLIYYVAHQN--QMDYATLQLQE 78 (383)
T ss_dssp STTCEEEEECCSCCCSSEEEEEEEEEECCSCEEEEEEECTT--SSSEEEEEEET
T ss_pred CCCeeEEEeCCchhcccceEEEEEEEcCCCCeEEEEeCCCC--CCcEEEEEEEC
Confidence 34789998743 3345789999999999999999997642 37999999975
No 57
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.04 E-value=1.1e-06 Score=53.16 Aligned_cols=61 Identities=15% Similarity=0.311 Sum_probs=45.3
Q ss_pred ecCCccCCeecCCCCC----CCCcccCCCCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCcccccCCCCC
Q psy11297 8 KRMGCLSASVVQSSQA----SPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKL 74 (132)
Q Consensus 8 ~~~~~~~~~~cp~~~~----g~~C~~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~~~~c~ 74 (132)
+..|-|... |+..|. |..|+ ++++|..+||. ++|++.. ++|+|.|+ ++.|..++.+...|.
T Consensus 20 n~~g~y~C~-C~~G~~~~~~g~~C~-dideC~~~~C~--~~C~n~~-g~y~C~C~-g~~G~~~~~~~~~C~ 84 (87)
T 1z6c_A 20 NIPGDFECE-CPEGYRYNLKSKSCE-DIDECSENMCA--QLCVNYP-GGYTCYCD-GKKGFKLAQDQKSCE 84 (87)
T ss_dssp CBTTBCCCS-SSTTCEEETTTTEEE-CCCHHHHSCCS--SEECCCS-SSCCEECC-SSSCCBCCTTSSSCB
T ss_pred CCCCCEEEE-CCCCceECCCCCcCC-CcCeeCCCCCC--CEEEccC-CCEEEECC-CCcCCcccCCCCcce
Confidence 334444443 444444 78895 88999999997 6999987 46999998 899999887766653
No 58
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.03 E-value=4e-06 Score=55.23 Aligned_cols=63 Identities=16% Similarity=0.306 Sum_probs=46.3
Q ss_pred eecCCccCCeecCCCCCCCCcccCCCCCCCCCCCCCC---eEeeCCCCceEEeCCCCcc----CCcccccC
Q psy11297 7 MKRMGCLSASVVQSSQASPNLRLEESPCLSHPCQNGA---TCQDEEDGLFECLCSPEFT----GYLCHTRA 70 (132)
Q Consensus 7 ~~~~~~~~~~~cp~~~~g~~C~~~~~~C~~~pC~ngg---~C~~~~~~~~~C~C~~g~~----G~~C~~~~ 70 (132)
....|-|.. .|+..|.|.+|+..++.|...+|.+++ +|++...++|+|.|++||. |..|+...
T Consensus 62 ~~~~g~y~C-~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~~~ 131 (142)
T 2c4f_L 62 KDQLQSYIC-FCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTV 131 (142)
T ss_dssp EEETTEEEE-ECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSSCEEESS
T ss_pred eCCCCCEEe-eCCCCccCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCCCCCCCCC
Confidence 334444443 355566699998767777766777777 9998874169999999999 99998654
No 59
>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus}
Probab=98.00 E-value=9.9e-06 Score=61.03 Aligned_cols=53 Identities=30% Similarity=0.444 Sum_probs=43.2
Q ss_pred CCCCCCcceEEe--cccCCceeEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEcC
Q psy11297 77 TPAFNGSSHIVM--KTLKAYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132 (132)
Q Consensus 77 ~~~~~g~~~~~~--~~~~~~~~~~i~~~f~t~~~~g~ll~~~~~~~~~~d~~~l~l~~ 132 (132)
...|.+.+|+.+ +........+|+|+|||..++|+|||.+.. ..||++|+|++
T Consensus 200 g~~F~g~sy~~~~~~~~~~~~~~~isl~frT~~~~GlLl~~~~~---~~d~l~l~L~~ 254 (383)
T 2jd4_A 200 GTFFEGSGYAALVKEGYKVRLDLQITLEFRTTSKNGVLLGISSA---KVDAIGLEIVD 254 (383)
T ss_dssp SEEEEEEEEEEEEEEEECCBSCEEEEEEEEESCSCEEEEEEECS---SSCEEEEEEET
T ss_pred CceECCCeEEEEecCccccCCceEEEEEEEeCCCCEEEEEecCC---CCcEEEEEEEC
Confidence 356788899998 444555578999999999999999998763 57999999975
No 60
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=97.95 E-value=3.2e-06 Score=56.03 Aligned_cols=38 Identities=24% Similarity=0.777 Sum_probs=34.1
Q ss_pred CCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCcccccC
Q psy11297 32 SPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRA 70 (132)
Q Consensus 32 ~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~~ 70 (132)
.+|.++||.+++.|.+.+. .|.|.|.+||+|..||+.+
T Consensus 120 ~~~~~~pc~~~g~C~~~~~-~~~c~C~~g~~g~~Ce~~~ 157 (157)
T 1g1t_A 120 AACTNTSCSGHGECVETIN-NYTCKCDPGFSGLKCEQIV 157 (157)
T ss_dssp CCCCTTGGGGSEEEEEETT-EEEEEECTTEESTTSCEEC
T ss_pred CCCCCCCCCCCCEeecCCC-CeeEECCCCccCccccccC
Confidence 5788899999999999985 6999999999999999753
No 61
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=97.94 E-value=9.5e-06 Score=52.23 Aligned_cols=36 Identities=28% Similarity=0.673 Sum_probs=29.7
Q ss_pred CCCCCCeEeeCC--CCceEEeCCCCccCCcccccCC-CC
Q psy11297 38 PCQNGATCQDEE--DGLFECLCSPEFTGYLCHTRAP-PK 73 (132)
Q Consensus 38 pC~ngg~C~~~~--~~~~~C~C~~g~~G~~C~~~~~-~c 73 (132)
||+|||+|++.. .+.++|.|+.+|+|.+|+.+++ +|
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~~~C 40 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTC 40 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESSCCS
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCcCCC
Confidence 899999999863 3423999999999999999875 44
No 62
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=97.92 E-value=5.8e-06 Score=57.41 Aligned_cols=59 Identities=20% Similarity=0.455 Sum_probs=30.2
Q ss_pred ecCCccCCeecCCCCCCCCcccCC-CCCCC--CCCCCCCeEeeCCCCceEEeCCCCcc----CCcccccC
Q psy11297 8 KRMGCLSASVVQSSQASPNLRLEE-SPCLS--HPCQNGATCQDEEDGLFECLCSPEFT----GYLCHTRA 70 (132)
Q Consensus 8 ~~~~~~~~~~cp~~~~g~~C~~~~-~~C~~--~pC~ngg~C~~~~~~~~~C~C~~g~~----G~~C~~~~ 70 (132)
...|-|... |+..|.|.+|+..+ +.|.. .+|.+ +|++.. ++|.|.|++||. |..|+...
T Consensus 58 n~~g~y~C~-C~~Gf~G~~Ce~~i~deC~~~~~~C~~--~C~n~~-gsy~C~C~~Gy~l~~dG~~C~~~~ 123 (195)
T 1nfu_B 58 DGLGEYTCT-CLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQ-NSVVCSCARGYTLADNGKACIPTG 123 (195)
T ss_dssp ------------------------CCGGGTGGGGCSS--EEEEET-TEEEEECCTTEEECTTSSCEEESS
T ss_pred CCCCCeeEe-CCCCceeccccccccccccCCCCCCCC--EeECCC-CCeEEECCCCceeCCCCCccccCC
Confidence 334444443 45555699998767 78987 46765 999987 569999999999 99998764
No 63
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.91 E-value=7e-06 Score=53.56 Aligned_cols=50 Identities=22% Similarity=0.474 Sum_probs=29.5
Q ss_pred cCCCCCCCCcccCC-CCCCC--CCCCCCCeEeeCCCCceEEeCCCCcc----CCcccccC
Q psy11297 18 VQSSQASPNLRLEE-SPCLS--HPCQNGATCQDEEDGLFECLCSPEFT----GYLCHTRA 70 (132)
Q Consensus 18 cp~~~~g~~C~~~~-~~C~~--~pC~ngg~C~~~~~~~~~C~C~~g~~----G~~C~~~~ 70 (132)
|+..|.|..|+..+ +.|.. .+|.+ +|++.. ++|+|.|++||. |..|+...
T Consensus 67 C~~G~~G~~C~~~i~d~C~~~~~~C~~--~C~~~~-g~y~C~C~~Gy~l~~~g~~C~~~~ 123 (134)
T 2vh0_B 67 CLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQ-NSVVCSCARGYTLADNGKACIPTG 123 (134)
T ss_dssp --------------CCGGGTGGGGCSS--EEEEET-TEEEEECCTTEEECTTSSCEEESS
T ss_pred CCCCccCCccccCCCCccccCCCCCCC--EeECCC-CCEEEECCCCcEECCCCCccCcCC
Confidence 55556699998766 78986 45765 999987 569999999999 99997643
No 64
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=97.88 E-value=5.6e-06 Score=54.63 Aligned_cols=35 Identities=37% Similarity=0.699 Sum_probs=30.3
Q ss_pred ccCCCCCCCCCCCCCCeEeeCCCCceEEeCCCCccCC
Q psy11297 28 RLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGY 64 (132)
Q Consensus 28 ~~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~ 64 (132)
++++++|+++||.| ++|++.. ++|+|.|++||+|.
T Consensus 1 ~~dideC~~~pC~n-g~C~n~~-g~y~C~C~~G~~g~ 35 (147)
T 2w86_A 1 SADIDECESSPCIN-GVCKNSP-GSFICECSSESTLD 35 (147)
T ss_dssp CCCCCGGGGCCSBT-SEEEEET-TEEEEECCTTEEEC
T ss_pred CCcCccCcCCCCCC-CEeECCC-CCEEeECCCCcccC
Confidence 35789999999987 5999987 57999999999875
No 65
>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus}
Probab=97.87 E-value=4.2e-05 Score=61.00 Aligned_cols=54 Identities=19% Similarity=0.206 Sum_probs=40.4
Q ss_pred CCCCCCcceEEeccc-CCceeEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEcC
Q psy11297 77 TPAFNGSSHIVMKTL-KAYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132 (132)
Q Consensus 77 ~~~~~g~~~~~~~~~-~~~~~~~i~~~f~t~~~~g~ll~~~~~~~~~~d~~~l~l~~ 132 (132)
...|+|.+|+.|++. .......|+|+|||..++|+|||.++.. ..|||+|+|++
T Consensus 12 ~~~F~g~~~~~y~p~~~~~~~~~isl~FrT~~~~glLly~~~~~--~~dfl~l~L~~ 66 (608)
T 2wjs_A 12 SVSSGGDCVRTYRPEIKKGSYNNIVVHVKTAVADNLLFYLGSAK--FIDFLAIEMRK 66 (608)
T ss_dssp BCC----CEEEECCCCSCTTEEEEEEEEEESCSCEEEEEEECSS--CSCEEEEEEET
T ss_pred EEEcCCCeEEEecCCCCCcccceEEEEEecCCCceEEEEeCCCC--CCcEEEEEEEC
Confidence 356888899998742 2445788999999999999999999842 48999999975
No 66
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=97.86 E-value=5.7e-06 Score=54.28 Aligned_cols=41 Identities=22% Similarity=0.599 Sum_probs=34.4
Q ss_pred CcccCCCCCCC--CCCCCCCeEeeCCCCceEEeCCCCccCCcccc
Q psy11297 26 NLRLEESPCLS--HPCQNGATCQDEEDGLFECLCSPEFTGYLCHT 68 (132)
Q Consensus 26 ~C~~~~~~C~~--~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~ 68 (132)
.|+ ++++|.. +||.++++|++.. ++|+|.|++||.|..+..
T Consensus 92 ~C~-dideC~~~~~~C~~~~~C~n~~-g~y~C~C~~Gy~g~~~~~ 134 (143)
T 2bou_A 92 TCQ-DVDECSSGQHQCDSSTVCFNTV-GSYSCRCRPGWKPRHGIP 134 (143)
T ss_dssp CEE-ECCHHHHTCCCCCTTSEEEECS-SCEEEECCSSSCBCTTCC
T ss_pred CcC-CccCccCcCCCCCCCCEEECCC-CCEEeeCCCCcccCCCCc
Confidence 564 7888984 8999999999987 569999999999977643
No 67
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=97.85 E-value=1.4e-05 Score=52.97 Aligned_cols=43 Identities=30% Similarity=0.621 Sum_probs=29.4
Q ss_pred CcccCCCCCCCCCCCCCCeEeeCC-CCce-EEeCCCCccCCcccccCC
Q psy11297 26 NLRLEESPCLSHPCQNGATCQDEE-DGLF-ECLCSPEFTGYLCHTRAP 71 (132)
Q Consensus 26 ~C~~~~~~C~~~pC~ngg~C~~~~-~~~~-~C~C~~g~~G~~C~~~~~ 71 (132)
+|....+.| ||+|||+|+... ...+ .|.|+.||.|.+|+.+.+
T Consensus 5 ~~~~~~~~c---pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~ 49 (145)
T 2i9a_A 5 ELHQVPSNC---DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS 49 (145)
T ss_dssp -------CC---CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESS
T ss_pred ccccCCCCC---CCCCCCCcCCCccccCCccccCCCCCCCCceecccc
Confidence 555444556 999999998751 1236 899999999999998775
No 68
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.83 E-value=5.5e-06 Score=49.91 Aligned_cols=38 Identities=29% Similarity=0.753 Sum_probs=32.0
Q ss_pred CCCcccCCCCCCCCC--CCCCCeEeeCCCCceEEeCCCCccCC
Q psy11297 24 SPNLRLEESPCLSHP--CQNGATCQDEEDGLFECLCSPEFTGY 64 (132)
Q Consensus 24 g~~C~~~~~~C~~~p--C~ngg~C~~~~~~~~~C~C~~g~~G~ 64 (132)
|..|+ ++++|..+| |. +++|++.. ++|+|.|++||.+.
T Consensus 40 g~~C~-dideC~~~~~~C~-~~~C~n~~-g~y~C~C~~G~~~~ 79 (86)
T 1lmj_A 40 MKNCM-DIDECQRDPLLCR-GGVCHNTE-GSYRCECPPGHQLS 79 (86)
T ss_dssp SSSEE-ECCHHHHCSSTTT-TSEEEEET-TEEEEESCTTSCCC
T ss_pred CCccC-CcccccCCCCcCC-CCEeEcCC-CCEEEECcCCcccC
Confidence 78896 889998877 65 57999987 57999999999874
No 69
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=97.81 E-value=3.3e-06 Score=57.20 Aligned_cols=61 Identities=26% Similarity=0.585 Sum_probs=43.8
Q ss_pred cCCCCCCCCcccCCCCCCCCC-CCCCCeEeeCCCCceEEeCCCCccCCcccccCCCCCCCCCCCCCcceEE
Q psy11297 18 VQSSQASPNLRLEESPCLSHP-CQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNGSSHIV 87 (132)
Q Consensus 18 cp~~~~g~~C~~~~~~C~~~p-C~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~~~~c~~~~~~~~g~~~~~ 87 (132)
|+..+.|..|+ .|..+| |.|+ +|+ +.|+|.|++||+|..|+.++++|....++.+++.++.
T Consensus 87 C~~G~~G~~C~----~C~~~~~C~~g-~C~----~~~~C~C~~G~~G~~C~~~~~~C~~~~~C~~~g~C~~ 148 (169)
T 2vj2_A 87 CQYGWQGLYCD----KCIPHPGCVHG-ICN----EPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSN 148 (169)
T ss_dssp ECTTEESSSSC----EECCCTTCSSE-ECS----STTCCEECTTEETTTTCEESCHHHHTCCCCTTCEEEE
T ss_pred CCCCCCCCCcc----cCCCCCCCCCC-CcC----CCCEEeCCCCCCCCcccCCCCCCCCCCCCCCCCEEcC
Confidence 44555577775 366666 7765 887 2388999999999999888877753467777776665
No 70
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=97.80 E-value=1.8e-05 Score=64.33 Aligned_cols=61 Identities=18% Similarity=0.371 Sum_probs=30.2
Q ss_pred cCCCCCCCCcc--cCCCCCCC---CCCCCCCeEeeCCCCceEEeC-CCCccCCcccccCCCCCCCCCCCCCcceE
Q psy11297 18 VQSSQASPNLR--LEESPCLS---HPCQNGATCQDEEDGLFECLC-SPEFTGYLCHTRAPPKLYDTPAFNGSSHI 86 (132)
Q Consensus 18 cp~~~~g~~C~--~~~~~C~~---~pC~ngg~C~~~~~~~~~C~C-~~g~~G~~C~~~~~~c~~~~~~~~g~~~~ 86 (132)
|+..+.|.+|+ ...+.|.. .+|.++|+|.. .+|.| ++||+|..|+. -..| +.+|.+++.++
T Consensus 549 C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~-----g~C~C~~~Gy~G~~Ce~-C~~C--~~~C~~~g~Cv 615 (690)
T 3fcs_B 549 CDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCEC-----GSCVCIQPGSYGDTCEK-CPTC--PDACTFKKECV 615 (690)
T ss_dssp ECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEET-----TEEECCSTTCBSTTSCB-CTTS--CCTTTSCCGGG
T ss_pred CcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeC-----CEEECCCCCccCCCcCc-CCCC--CCCCCCCCCcc
Confidence 33344455554 34445554 44555555532 25666 56666666654 1123 34555555554
No 71
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.78 E-value=2.2e-05 Score=57.71 Aligned_cols=49 Identities=16% Similarity=0.410 Sum_probs=39.3
Q ss_pred CccCCeecCCCCCCCCcccCCCCCCC---CCCCCCCeEeeCCCCceEEeCCCCccC
Q psy11297 11 GCLSASVVQSSQASPNLRLEESPCLS---HPCQNGATCQDEEDGLFECLCSPEFTG 63 (132)
Q Consensus 11 ~~~~~~~cp~~~~g~~C~~~~~~C~~---~pC~ngg~C~~~~~~~~~C~C~~g~~G 63 (132)
+-|.. .|+..+.|.+|+.++++|.. +||.+ +|++.. ++|.|.|++||.|
T Consensus 24 ~~~~C-~C~~g~~g~~C~~~~~eC~~~~~~~C~~--~C~~~~-g~~~C~C~~g~~~ 75 (317)
T 3h5c_B 24 WGYTC-TCSPGYEGSNCELAKNECHPERTDGCQH--FCLPGQ-ESYTCSCAQGYRL 75 (317)
T ss_dssp SSCCC-CCSSSCCSSSSCCCSSSCCTTCTTSCSS--EEECCS-SSCEEECCTTEEC
T ss_pred CCeEE-ECCCCCcCCccccCcccCCCCCCCCCcC--ccccCC-CeeEEeccccccc
Confidence 33444 35555669999989999987 89987 999987 4699999999986
No 72
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=97.77 E-value=4.5e-05 Score=48.24 Aligned_cols=72 Identities=21% Similarity=0.407 Sum_probs=45.2
Q ss_pred EeecCCccCCeecCCCCCCCCcccCC--CCCCCC--CCCCCCeEeeCCCCceEEeCCCCcc----CCcccccCCCCCCCC
Q psy11297 6 RMKRMGCLSASVVQSSQASPNLRLEE--SPCLSH--PCQNGATCQDEEDGLFECLCSPEFT----GYLCHTRAPPKLYDT 77 (132)
Q Consensus 6 ~~~~~~~~~~~~cp~~~~g~~C~~~~--~~C~~~--pC~ngg~C~~~~~~~~~C~C~~g~~----G~~C~~~~~~c~~~~ 77 (132)
+....|-|... |+..|.|..|+..+ ++|..+ +|.+ +|++.. ++|+|.|++||+ |..|+... ..
T Consensus 28 C~~~~~~y~C~-C~~G~~G~~C~~~~~~~~C~~~~~~C~~--~C~n~~-g~y~C~C~~G~~~~~~g~~C~~~~-----~~ 98 (114)
T 1aut_L 28 CIDGIGSFSCD-CRSGWEGRFCQREVSFLNCSLDNGGCTH--YCLEEV-GWRRCSCAPGYKLGDDLLQCHPAV-----KF 98 (114)
T ss_dssp ECCCSSCCCEE-ECTTEESTTSCEECCSSSSSSGGGGCSS--EEEECS-SSEEEECCTTEEECTTSSCEEECS-----SS
T ss_pred CCCCCCCcEee-CCCCCcCCCcCcCCcCCcCcCCCCCCCC--EeECCC-CCEEeECCCCeeECCCCCccCcCc-----cc
Confidence 33444545544 44555699998654 378753 4543 999987 469999999998 57776543 44
Q ss_pred CCCCCcceE
Q psy11297 78 PAFNGSSHI 86 (132)
Q Consensus 78 ~~~~g~~~~ 86 (132)
++.+++..+
T Consensus 99 pC~~~~~~i 107 (114)
T 1aut_L 99 PCGRPWKRM 107 (114)
T ss_dssp CTTCCC---
T ss_pred CCCCCCccC
Confidence 555555333
No 73
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=97.75 E-value=5.7e-06 Score=54.57 Aligned_cols=46 Identities=24% Similarity=0.582 Sum_probs=36.5
Q ss_pred ecCCCC---CCCCcccCCCCCCCCC--CCCCCeEeeCCCCceEEeCCCCccCCc
Q psy11297 17 VVQSSQ---ASPNLRLEESPCLSHP--CQNGATCQDEEDGLFECLCSPEFTGYL 65 (132)
Q Consensus 17 ~cp~~~---~g~~C~~~~~~C~~~p--C~ngg~C~~~~~~~~~C~C~~g~~G~~ 65 (132)
.|+..| .|..|+ ++++|..+| |.|+ +|++.. ++|+|.|++||+|..
T Consensus 91 ~C~~Gy~~~~g~~C~-dideC~~~~~~C~~g-~C~n~~-g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 91 ICGKGYSRIKGTQCE-DIDECEVFPGVCKNG-LCVNTR-GSFKCQCPSGMTLDA 141 (147)
T ss_dssp TTCTTEEEEETTEEE-ECCHHHHSTTCSSSS-EEEEET-TEEEEECCTTCCBCT
T ss_pred cCCCccccCCCCccC-ccccccCCCCCCCCC-EEECCC-CCEEeeCCCCCccCC
Confidence 356555 488997 899998555 9975 999987 569999999998753
No 74
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=97.67 E-value=3.1e-05 Score=51.77 Aligned_cols=40 Identities=25% Similarity=0.715 Sum_probs=33.3
Q ss_pred CCCCCC-CCCCCCCCeEeeCCCCceEEeCCCCcc----CCcccccCCC
Q psy11297 30 EESPCL-SHPCQNGATCQDEEDGLFECLCSPEFT----GYLCHTRAPP 72 (132)
Q Consensus 30 ~~~~C~-~~pC~ngg~C~~~~~~~~~C~C~~g~~----G~~C~~~~~~ 72 (132)
++++|+ .+||. +++|++.. ++|+|.|++||. |..|+ ++++
T Consensus 2 dideC~~~~~C~-~~~C~n~~-gsy~C~C~~Gy~~~~~g~~C~-d~~~ 46 (162)
T 1uzk_A 2 DVNECLDPTTCI-SGNCVNTP-GSYICDCPPDFELNPTRVGCV-DTRS 46 (162)
T ss_dssp CCCGGGSTTSSB-TSEEEEET-TEEEEECCTTCEECTTSSBEE-CCCC
T ss_pred ccccCCCCCCCC-CCEeECCC-CCEEEeCCCCCeECCCCCccc-CCCC
Confidence 678998 48997 68999987 579999999998 89997 4544
No 75
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=97.67 E-value=1.3e-05 Score=47.51 Aligned_cols=38 Identities=34% Similarity=0.817 Sum_probs=28.5
Q ss_pred CCCCC---CCCCCCCCeEeeC-CCCceEEeCCCCccCCccccc
Q psy11297 31 ESPCL---SHPCQNGATCQDE-EDGLFECLCSPEFTGYLCHTR 69 (132)
Q Consensus 31 ~~~C~---~~pC~ngg~C~~~-~~~~~~C~C~~g~~G~~C~~~ 69 (132)
.++|. .+.|.|| +|... ..+.+.|.|++||+|.+|+..
T Consensus 37 ~~pC~~~~~~yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE~l 78 (79)
T 1xdt_R 37 RDPCLRKYKDFCIHG-ECKYVKELRAPSCICHPGYHGERCHGL 78 (79)
T ss_dssp --CTTTTTTTCCSSE-EECCBGGGTBCCEEECTTEESTTCCEE
T ss_pred CCCCCccccCcCCCC-EeeeecCCCCeEEEcCCCccccccccc
Confidence 46888 7999997 99522 113589999999999999863
No 76
>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus}
Probab=97.67 E-value=0.0001 Score=58.78 Aligned_cols=53 Identities=15% Similarity=0.301 Sum_probs=42.2
Q ss_pred CCCCCCcceEEecccCCceeEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEcC
Q psy11297 77 TPAFNGSSHIVMKTLKAYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132 (132)
Q Consensus 77 ~~~~~g~~~~~~~~~~~~~~~~i~~~f~t~~~~g~ll~~~~~~~~~~d~~~l~l~~ 132 (132)
...|.+.+|+.++........+++|.|||..++|+|||.+.. ..||++|+|+|
T Consensus 389 ~~~F~~~g~~~~~~~~~~~~~~i~~~FRT~~~~GlLl~~~~~---~~~~l~l~L~~ 441 (608)
T 2wjs_A 389 TVSFPKPGFVELAAVSIDVGTEINLSFSTRNESGIILLGSGG---GQAYYAIFLNK 441 (608)
T ss_dssp EEECSSSCEEEECCCCBCTTEEEEEEEEESCSSEEEEEEC------CCEEEEEEET
T ss_pred ccccCCCCeEEecCccCCCCcEEEEEEEeCCCCeEEEEEcCC---CCceEEEEEEC
Confidence 346788899998765555568999999999999999999764 57999999975
No 77
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=97.65 E-value=1e-05 Score=51.57 Aligned_cols=42 Identities=21% Similarity=0.517 Sum_probs=28.3
Q ss_pred CCCCCCCCCCCeEeeCCCCceEEeCCCCcc---CCcccccCCCCCCCCCC
Q psy11297 33 PCLSHPCQNGATCQDEEDGLFECLCSPEFT---GYLCHTRAPPKLYDTPA 79 (132)
Q Consensus 33 ~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~---G~~C~~~~~~c~~~~~~ 79 (132)
+|...||. ++|++. ++|+|.|++||. |..| +++++|....++
T Consensus 45 ~C~~~~C~--~~C~~~--~~y~C~C~~Gy~~~~g~~C-~dideC~~~~~C 89 (118)
T 1dx5_I 45 FCNQTACP--ADCDPN--TQASCECPEGYILDDGFIC-TDIDECENGGFC 89 (118)
T ss_dssp CCCSSEEE--CEECTT--STTCEECCTTEEEETTTEE-EECCHHHHCSSC
T ss_pred ccCCCCCC--CcccCC--CCeEeECCCCccCCCCCcc-ccccccCCCCCC
Confidence 57777776 577763 347888888877 7777 467776533555
No 78
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.62 E-value=5.9e-05 Score=57.22 Aligned_cols=54 Identities=15% Similarity=0.276 Sum_probs=34.6
Q ss_pred EeecCCccCCeecCCCCC---CCCcccCCCCCC-CCCCCCCCeEeeCCCCceEEeCCCCccCC
Q psy11297 6 RMKRMGCLSASVVQSSQA---SPNLRLEESPCL-SHPCQNGATCQDEEDGLFECLCSPEFTGY 64 (132)
Q Consensus 6 ~~~~~~~~~~~~cp~~~~---g~~C~~~~~~C~-~~pC~ngg~C~~~~~~~~~C~C~~g~~G~ 64 (132)
+.+.+|-|... ||..|. |..|+ ++++|. ..+|.+ +|++.. ++|.|.|.+||.+.
T Consensus 14 C~~~~~~y~C~-C~~G~~~~~~~~C~-dideC~~~~~C~~--~C~n~~-g~~~C~C~~g~~~~ 71 (400)
T 3p5b_L 14 CNDLKIGYECL-CPDGFQLVAQRRCE-DIDECQDPDTCSQ--LCVNLE-GGYKCQCEEGFQLD 71 (400)
T ss_dssp EEECSSSEEEE-CCTTEEECSSSCEE-ECCCCSTTSSCSS--CCBCCS-SSCBCCCCTTCCCC
T ss_pred eECCCCCeEEE-CCCCCCcCCCCccc-CchhhhccCCCCC--ccCCCc-cceeeecccccccc
Confidence 45555555554 444443 67774 777886 367754 787776 45888888888764
No 79
>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A
Probab=97.60 E-value=0.00014 Score=55.07 Aligned_cols=52 Identities=23% Similarity=0.369 Sum_probs=40.6
Q ss_pred CCCCCcceEEec-ccCCceeEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEcC
Q psy11297 78 PAFNGSSHIVMK-TLKAYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132 (132)
Q Consensus 78 ~~~~g~~~~~~~-~~~~~~~~~i~~~f~t~~~~g~ll~~~~~~~~~~d~~~l~l~~ 132 (132)
..|.+.+|+.+. ........+|+|.|||..++|+|||.+.. ..||++|+|+|
T Consensus 214 ~~F~g~gy~~~~~~~~~~~~~~is~~frT~~~~GlLl~~~~~---~~~~l~l~L~~ 266 (394)
T 1dyk_A 214 TYFDGTGFAKAVGGFKVGLDLLVEFEFRTTRPTGVLLGVSSQ---KMDGMGIEMID 266 (394)
T ss_dssp EEEEEEEEEECCSSBCCBSEEEEEEEEEESCSCEEEEEEECS---SSCEEEEEEET
T ss_pred ceeCCCceeEEcCCcccCCceEEEEEEEeCCCCEEEEEecCC---CCCEEEEEEEC
Confidence 457778888764 23344578999999999999999998632 57999999975
No 80
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.60 E-value=9.8e-06 Score=63.01 Aligned_cols=72 Identities=21% Similarity=0.385 Sum_probs=41.8
Q ss_pred eeEeecCCc-cCCeecCCCCCCCCcccCCCCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCcccccCCCCCCCCCCCCC
Q psy11297 4 LVRMKRMGC-LSASVVQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAPPKLYDTPAFNG 82 (132)
Q Consensus 4 ~~~~~~~~~-~~~~~cp~~~~g~~C~~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~~~~c~~~~~~~~g 82 (132)
|.|+..+.+ +....|+..+.|..|+. +.|.. +|.| |+|+.. ++|.|++||+|..|+.. .|. . +|.++
T Consensus 366 I~Ri~~p~~~~~p~~C~~~~~g~~c~~--~~C~~-~C~n-G~C~~~----~~C~C~~G~~G~~C~~~--~C~-~-~C~~~ 433 (463)
T 2wg3_C 366 LYKIVDPKRPLMPEECRATVQPAQTLT--SECSR-LCRN-GYCTPT----GKCCCSPGWEGDFCRTA--KCE-P-ACRHG 433 (463)
T ss_dssp EEEEECTTSCSSCGGGCCCCCCCCCCC--CHHHH-HCCS-EEECTT----SCEEECTTEESTTSCEE--CC---------
T ss_pred EEEecCcccccccccCCCCCcCCCCcc--ccccC-CCCC-CccCCC----CeECCCCCcCCCcCCcC--cCC-C-CCCCC
Confidence 345543333 45567777777888874 56876 6987 699742 58999999999999753 465 4 67676
Q ss_pred cceEE
Q psy11297 83 SSHIV 87 (132)
Q Consensus 83 ~~~~~ 87 (132)
+.|+.
T Consensus 434 g~C~~ 438 (463)
T 2wg3_C 434 GVCVR 438 (463)
T ss_dssp -----
T ss_pred CEECC
Confidence 65554
No 81
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=97.56 E-value=5.6e-05 Score=50.35 Aligned_cols=37 Identities=19% Similarity=0.591 Sum_probs=32.9
Q ss_pred CCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCccccc
Q psy11297 32 SPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTR 69 (132)
Q Consensus 32 ~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~ 69 (132)
.+|..++|.++|+|.+... .|.|.|.+||.|..|+..
T Consensus 120 ~~~~~~~C~~~g~C~~~~~-~~~c~C~~g~~g~~C~~~ 156 (164)
T 3cfw_A 120 ASCQPWSCSGHGECVEIIN-NYTCNCDVGYYGPQCQFV 156 (164)
T ss_dssp CCCCTTSSCSSEEEEEETT-EEEEEECTTCBSSSSCBC
T ss_pred CCCCCCcCCCCCeecccCC-CceeeeCCCccccccccc
Confidence 4688899999999999875 699999999999999864
No 82
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.54 E-value=0.00011 Score=39.84 Aligned_cols=32 Identities=28% Similarity=0.696 Sum_probs=25.5
Q ss_pred cCCCCCCC----------CCCCCCCeEeeCCCCceEEeCCCCccC
Q psy11297 29 LEESPCLS----------HPCQNGATCQDEEDGLFECLCSPEFTG 63 (132)
Q Consensus 29 ~~~~~C~~----------~pC~ngg~C~~~~~~~~~C~C~~g~~G 63 (132)
+++++|.. .+|. .+|++.. ++|.|.|++||.+
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~--~~C~n~~-Gsy~C~C~~Gy~~ 43 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQ--HLCHNYV-GGYFCSCRPGYEL 43 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTS--SEEEEET-TEEEEECSTTCEE
T ss_pred CccccccCcccccccccCCCCC--CEeECCC-CCeEEECCCCCeE
Confidence 46778875 6786 4999988 5799999999974
No 83
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=97.53 E-value=4.4e-05 Score=47.90 Aligned_cols=52 Identities=21% Similarity=0.413 Sum_probs=31.5
Q ss_pred CCCCCcccCCCCCCCC--CCCCCCeEeeCCCCceEEeCCCCccC---CcccccCCCCCCCCCC
Q psy11297 22 QASPNLRLEESPCLSH--PCQNGATCQDEEDGLFECLCSPEFTG---YLCHTRAPPKLYDTPA 79 (132)
Q Consensus 22 ~~g~~C~~~~~~C~~~--pC~ngg~C~~~~~~~~~C~C~~g~~G---~~C~~~~~~c~~~~~~ 79 (132)
+.+..| ++++|..+ +|. .+|++... +|+|.|++||.| ..|+ ++++|....+|
T Consensus 22 ~~~~~C--d~neC~~~~~~C~--~~C~n~~g-~y~C~C~~Gy~g~~g~~C~-dideC~~~~~C 78 (107)
T 2w2n_E 22 YFQGAM--GTNECLDNNGGCS--YVCNDLKI-GYECLCPDGFQLVAQRRCE-DIDECQDPDTC 78 (107)
T ss_dssp CCSCCB--SCCGGGTGGGGCS--SEEECCSB-SCEEECCTTCEEETTTEEE-C----------
T ss_pred cCCCCC--cCccCcCCCCCCC--CEeEeCCC-CeEEECCCCccccCCCccc-cccccCCCCCc
Confidence 346777 45677653 454 48998874 599999999998 8898 88888633444
No 84
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=97.50 E-value=0.00015 Score=39.27 Aligned_cols=36 Identities=31% Similarity=0.724 Sum_probs=27.9
Q ss_pred CCCC---CCCCCCCCeEe-eCCCCceEEeCCCCccCCcccc
Q psy11297 32 SPCL---SHPCQNGATCQ-DEEDGLFECLCSPEFTGYLCHT 68 (132)
Q Consensus 32 ~~C~---~~pC~ngg~C~-~~~~~~~~C~C~~g~~G~~C~~ 68 (132)
++|. .+.|.|| +|. ....+.+.|.|+.+|+|.+|+.
T Consensus 10 ~~C~~~~~~yC~nG-~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 10 NPCNAEFQNFCIHG-ECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp CTTTTTGGGTCSSS-EEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred cccCchhhCcCCCC-EEEEecCCCCeeEECCCCcccccccc
Confidence 5676 3789985 998 2222468999999999999985
No 85
>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A*
Probab=97.49 E-value=0.00016 Score=55.29 Aligned_cols=55 Identities=15% Similarity=0.149 Sum_probs=41.0
Q ss_pred CCCCCCcceEEecccC----------CceeEEEEEEEEeCCCCeEEEEeccCCCCCCCeEEEEEcC
Q psy11297 77 TPAFNGSSHIVMKTLK----------AYNKLSIEIEFKTNKNDGILLYNQQNLDGTGDFVSLAIVN 132 (132)
Q Consensus 77 ~~~~~g~~~~~~~~~~----------~~~~~~i~~~f~t~~~~g~ll~~~~~~~~~~d~~~l~l~~ 132 (132)
...|.+.+|+.|+... ....++|+|.|||..++|+|||.+.. ++..||++|+|+|
T Consensus 221 g~~F~g~s~~~~~~~~~~lp~~~~~~~~~~~~is~~fRT~~~~GlLl~~~~~-~~~~d~l~l~L~~ 285 (422)
T 1h30_A 221 GSFYPGSGFAFYSLDYMRTPLDVGTESTWEVEVVAHIRPAADTGVLFALWAP-DLRAVPLSVALVD 285 (422)
T ss_dssp SEEECSSCCEEECCCCBC--------CCBCEEEEEEEEESSSCEEEEEEEEG-GGTEEEEEEEEES
T ss_pred CceECCCeEEEEecCccccccccccccccceEEEEEEecCCCCEEEEEecCC-CcCCCcEEEEEEc
Confidence 3467888899886321 12367999999999999999998742 1126899999975
No 86
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=97.48 E-value=7.7e-05 Score=60.63 Aligned_cols=64 Identities=14% Similarity=0.242 Sum_probs=48.5
Q ss_pred cCCCCCCCCcccCC--------CCCCC----CCCCCCCeEeeCCCCceEEeCC----CCccCCcccccCCCCCCC--CCC
Q psy11297 18 VQSSQASPNLRLEE--------SPCLS----HPCQNGATCQDEEDGLFECLCS----PEFTGYLCHTRAPPKLYD--TPA 79 (132)
Q Consensus 18 cp~~~~g~~C~~~~--------~~C~~----~pC~ngg~C~~~~~~~~~C~C~----~g~~G~~C~~~~~~c~~~--~~~ 79 (132)
|+..+.|.+|+... +.|.. .+|.++|+|+. +.|.|+ +||+|..|+.+...|... .+|
T Consensus 462 C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~-----g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C 536 (690)
T 3fcs_B 462 CGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLC-----GQCVCHSSDFGKITGKYCECDDFSCVRYKGEMC 536 (690)
T ss_dssp ECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEECS-----SSEEECCCSSCCCBSTTSCBCSSCCCBSSSSBG
T ss_pred eCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEEC-----CeeEeecCCCCCeeCCCcCcccCcCcCCCCCCC
Confidence 55666799998765 67986 45999999982 589999 999999999888777521 356
Q ss_pred CCCcceE
Q psy11297 80 FNGSSHI 86 (132)
Q Consensus 80 ~~g~~~~ 86 (132)
.+++.+.
T Consensus 537 ~~~G~C~ 543 (690)
T 3fcs_B 537 SGHGQCS 543 (690)
T ss_dssp GGSEEEE
T ss_pred CCCCEec
Confidence 5555443
No 87
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=97.46 E-value=5.8e-05 Score=49.88 Aligned_cols=59 Identities=15% Similarity=0.401 Sum_probs=42.3
Q ss_pred eecCCccCCeecCCCCCCCCcccCCCCCCCC--CCCCCCeE-eeCCCCceEEeCCCCcc----CCcccccC
Q psy11297 7 MKRMGCLSASVVQSSQASPNLRLEESPCLSH--PCQNGATC-QDEEDGLFECLCSPEFT----GYLCHTRA 70 (132)
Q Consensus 7 ~~~~~~~~~~~cp~~~~g~~C~~~~~~C~~~--pC~ngg~C-~~~~~~~~~C~C~~g~~----G~~C~~~~ 70 (132)
....|-|.. .|+..|.|..|+. +++|... +|.+ +| ++.. ++|+|.|++||. |..|+...
T Consensus 63 ~~~~~~y~C-~C~~G~~G~~C~~-~deC~~~~~~C~~--~C~~n~~-g~y~C~C~~Gy~l~~dG~~C~~~~ 128 (146)
T 1x7a_L 63 KDDINSYEC-WCQVGFEGKNCEL-DATCNIKNGRCKQ--FCKTGAD-SKVLCSCTTGYRLAPDQKSCKPAV 128 (146)
T ss_dssp EECSSCEEE-ECCSSEESTTTCE-ECCTTSGGGSCSS--BCCCCSS-SCCCCBCCTTEEECTTSSSEEECS
T ss_pred ECCCCCEEE-ecCCCCcCCcCCC-CccccCCCCCCcC--CCCCCCC-CCEEeEcCCCcEeCCCCCcCCCCC
Confidence 334444443 3555566999974 4899874 5765 89 7776 569999999999 89998643
No 88
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=97.41 E-value=0.00015 Score=39.34 Aligned_cols=32 Identities=25% Similarity=0.682 Sum_probs=25.8
Q ss_pred CCCCCCCCeEeeC-CCCceEEeCCCCccCCcccc
Q psy11297 36 SHPCQNGATCQDE-EDGLFECLCSPEFTGYLCHT 68 (132)
Q Consensus 36 ~~pC~ngg~C~~~-~~~~~~C~C~~g~~G~~C~~ 68 (132)
.+.|.|| +|... ....++|.|++||+|.+|+.
T Consensus 13 ~~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 3e50_C 13 TQFCFHG-TCRFLVQEDKPACVCHSGYVGARCEH 45 (50)
T ss_pred cCcccCC-EEeeccCCCCeEEECCCCCcccCCCc
Confidence 4789997 99842 12359999999999999986
No 89
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=97.40 E-value=0.00014 Score=39.43 Aligned_cols=34 Identities=21% Similarity=0.577 Sum_probs=26.6
Q ss_pred CCCCCCCCeEe-eCCCCceEEeCCCCccCCcccccC
Q psy11297 36 SHPCQNGATCQ-DEEDGLFECLCSPEFTGYLCHTRA 70 (132)
Q Consensus 36 ~~pC~ngg~C~-~~~~~~~~C~C~~g~~G~~C~~~~ 70 (132)
.+.|.| |+|. ....+.+.|.|+.||+|.+||...
T Consensus 13 ~~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~~~ 47 (50)
T 1iox_A 13 KHYCIK-GRCRFVVAEQTPSCVCDEGYIGARCERVD 47 (50)
T ss_dssp TTSCTT-CCEEEETTTTEEEECCCTTEETTTTCEEC
T ss_pred cCcccC-CEEEeEcCCCCeEEECCCCcccCCCCeec
Confidence 478999 6996 222346999999999999999753
No 90
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=97.38 E-value=0.00014 Score=54.04 Aligned_cols=45 Identities=27% Similarity=0.612 Sum_probs=30.6
Q ss_pred cCCCCCCCCcccCCCCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCccccc
Q psy11297 18 VQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTR 69 (132)
Q Consensus 18 cp~~~~g~~C~~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~ 69 (132)
|+..+.|.+|+. +.|.+ +|.++|+|+. .+.|.|++||+|..|+..
T Consensus 169 C~~G~~G~~C~~--~~C~~-~C~~~G~C~~----~~~C~C~~G~~G~~C~~~ 213 (324)
T 2ygq_A 169 CPDGFHGPHCEK--ALCTP-RCMNGGLCVT----PGFCICPPGFYGVNCDKA 213 (324)
T ss_dssp CCTTEESSSSCE--ESSSS-CCCTTCEECS----SCCEECCTTCBTTTTCBC
T ss_pred CCCCCcCCCCCC--CCCCC-CCCCCCEEcC----CCEEeCCCCccCCCcccC
Confidence 445556778865 35653 7888888864 257888888888887753
No 91
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=97.33 E-value=0.0001 Score=46.88 Aligned_cols=35 Identities=23% Similarity=0.611 Sum_probs=29.7
Q ss_pred cCCCCCCCCCCCCCCeEeeC-CCCceEEeCCCCccCCcc
Q psy11297 29 LEESPCLSHPCQNGATCQDE-EDGLFECLCSPEFTGYLC 66 (132)
Q Consensus 29 ~~~~~C~~~pC~ngg~C~~~-~~~~~~C~C~~g~~G~~C 66 (132)
+++++|.++||.+ +|++. . ++|+|.|++||.|..+
T Consensus 2 ~dideC~~~pC~~--~C~~~~~-g~y~C~C~~Gy~g~~~ 37 (118)
T 1dx5_I 2 EPVDPCFRANCEY--QCQPLDQ-TSYLCVCAEGFAPIPH 37 (118)
T ss_dssp CCCCGGGGCCCSS--EEEECSS-SCEEEECCTTEEEETT
T ss_pred CccccCCCCCCCC--CCCCCCC-CCEEeECCCCccccCC
Confidence 4678999999985 99998 6 4699999999998744
No 92
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=97.30 E-value=3.8e-05 Score=48.20 Aligned_cols=55 Identities=16% Similarity=0.273 Sum_probs=13.7
Q ss_pred eEeecCCccCCeecCCCCCC---CCcccCCCCCCC-CCCCCCCeEeeCCCCceEEeCCCCccCC
Q psy11297 5 VRMKRMGCLSASVVQSSQAS---PNLRLEESPCLS-HPCQNGATCQDEEDGLFECLCSPEFTGY 64 (132)
Q Consensus 5 ~~~~~~~~~~~~~cp~~~~g---~~C~~~~~~C~~-~pC~ngg~C~~~~~~~~~C~C~~g~~G~ 64 (132)
.+.+..|-|... ||..|.| ..|+ ++++|.. +||. ++|++.. ++|.|.|++||.+.
T Consensus 42 ~C~n~~g~y~C~-C~~Gy~g~~g~~C~-dideC~~~~~C~--~~C~n~~-gsy~C~C~~Gy~~~ 100 (107)
T 2w2n_E 42 VCNDLKIGYECL-CPDGFQLVAQRRCE-DIDECQDPDTCS--QLCVNLE-GGYKCQCEEGFQLD 100 (107)
T ss_dssp EEECCSBSCEEE-CCTTCEEETTTEEE-C-----------------------------------
T ss_pred EeEeCCCCeEEE-CCCCccccCCCccc-cccccCCCCCcC--CeeecCC-CCEEEECCCCceEC
Confidence 344555555554 4544545 7897 8999984 8896 6999987 46999999999864
No 93
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=97.30 E-value=0.00012 Score=54.46 Aligned_cols=44 Identities=27% Similarity=0.577 Sum_probs=29.2
Q ss_pred cCCCCCCCCcccCCCCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCcccc
Q psy11297 18 VQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHT 68 (132)
Q Consensus 18 cp~~~~g~~C~~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~ 68 (132)
|+..+.|.+|+. ..|. .+|.++|+|... ++|.|++||+|..|+.
T Consensus 201 C~~G~~G~~C~~--~~C~-~~C~~~G~C~~~----~~C~C~~G~~G~~C~~ 244 (324)
T 2ygq_A 201 CPPGFYGVNCDK--ANCS-TTCFNGGTCFYP----GKCICPPGLEGEQCEI 244 (324)
T ss_dssp CCTTCBTTTTCB--CCCS-SCCCSSCCBSCS----SCBCCCTTCCTTTTC-
T ss_pred CCCCccCCCccc--CcCC-CCCCCCCeeCCC----CeeeCCCCccCCCCCc
Confidence 444555778864 3464 578887888642 5788888888887764
No 94
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.28 E-value=4.4e-05 Score=57.57 Aligned_cols=47 Identities=21% Similarity=0.664 Sum_probs=13.0
Q ss_pred CccCCeecCCCCC----CCCcccCCCCCC-CCCCCCCCeEeeCCCCceEEeCCCCcc
Q psy11297 11 GCLSASVVQSSQA----SPNLRLEESPCL-SHPCQNGATCQDEEDGLFECLCSPEFT 62 (132)
Q Consensus 11 ~~~~~~~cp~~~~----g~~C~~~~~~C~-~~pC~ngg~C~~~~~~~~~C~C~~g~~ 62 (132)
|-|... |+..|. |..| +++++|. ..||.++ |++.. ++|.|.|++||.
T Consensus 22 g~~~C~-C~~G~~l~~~~~~C-~d~~eC~~~~~C~~~--C~~~~-g~~~C~C~~g~~ 73 (386)
T 3v65_B 22 GAVQCT-CHTGYRLTEDGRTC-QDVNECAEEGYCSQG--CTNSE-GAFQCWCEAGYE 73 (386)
T ss_dssp --------------------------------CCTTE--EC------CCEECCTTEE
T ss_pred CCcEeE-CCCCceECCCCCcc-CccceeCCcCcccCc--CCCCC-CCCeEEECCCce
Confidence 334442 444454 6777 5777885 5777753 87775 788888888887
No 95
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=97.23 E-value=0.00017 Score=49.54 Aligned_cols=39 Identities=26% Similarity=0.631 Sum_probs=30.3
Q ss_pred CCcccCCCCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCcccccC
Q psy11297 25 PNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRA 70 (132)
Q Consensus 25 ~~C~~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~~ 70 (132)
+.|.+ ..|. .+|.|||.|+.. ..|.|+.||+|..|+...
T Consensus 144 K~C~~--~~C~-~~C~ngG~Cv~P----~~C~C~~Gw~G~~C~~~~ 182 (188)
T 2ygo_A 144 KTCQQ--AECP-GGCRNGGFCNER----RICECPDGFHGPHCEGTK 182 (188)
T ss_dssp EEECC--CCCT-TCCCTTCEECTT----SCEECCTTCBTTTTCBC-
T ss_pred ccccC--CccC-CCCCCCCEeCCC----CcccCcCCCCCCCCcCCc
Confidence 35543 3576 689999999963 589999999999999754
No 96
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.22 E-value=6.2e-05 Score=58.50 Aligned_cols=46 Identities=22% Similarity=0.556 Sum_probs=11.5
Q ss_pred ecCCCCCCCCcccCCCCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCccccc
Q psy11297 17 VVQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTR 69 (132)
Q Consensus 17 ~cp~~~~g~~C~~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~ 69 (132)
.|+..+.|..|+. +.|.+ ||.|+|+|+.. ++|.|++||+|..|+..
T Consensus 411 ~C~~G~~G~~C~~--~~C~~-~C~~~g~C~~~----~~C~C~~G~~G~~C~~~ 456 (463)
T 2wg3_C 411 CCSPGWEGDFCRT--AKCEP-ACRHGGVCVRP----NKCLCKKGYLGPQCEQV 456 (463)
T ss_dssp EECTTEESTTSCE--ECC-----------------------------------
T ss_pred CCCCCcCCCcCCc--CcCCC-CCCCCCEECCC----CEEECCCCcccCCCCCC
Confidence 4556677999963 57987 99999999853 69999999999999864
No 97
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=97.13 E-value=0.00023 Score=57.86 Aligned_cols=46 Identities=17% Similarity=0.442 Sum_probs=38.0
Q ss_pred cCCCCCCCCcc--cCCCCCCCC---CCCCCCeEeeCCCCceEEeCCCCccCCcccc
Q psy11297 18 VQSSQASPNLR--LEESPCLSH---PCQNGATCQDEEDGLFECLCSPEFTGYLCHT 68 (132)
Q Consensus 18 cp~~~~g~~C~--~~~~~C~~~---pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~ 68 (132)
|+..+.|.+|+ ...+.|..+ +|.++|+|.. ..|.|.+||+|.+|++
T Consensus 542 C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~-----g~C~C~~Gy~G~~Ce~ 592 (687)
T 3k6s_B 542 CHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRC-----NVCECHSGYQLPLCQE 592 (687)
T ss_dssp ECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCS-----SCBCCSTTCCTTTTCC
T ss_pred cCCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCCC-----CEEECCCCCcCCCCCC
Confidence 56667799998 335788765 8999999975 4699999999999987
No 98
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=97.11 E-value=0.00011 Score=49.04 Aligned_cols=37 Identities=22% Similarity=0.501 Sum_probs=30.0
Q ss_pred cccCCCCCCC--CCCCCCCeEeeCCCCceEEeCCCCccCCc
Q psy11297 27 LRLEESPCLS--HPCQNGATCQDEEDGLFECLCSPEFTGYL 65 (132)
Q Consensus 27 C~~~~~~C~~--~pC~ngg~C~~~~~~~~~C~C~~g~~G~~ 65 (132)
+.+++++|.. ++|.| ++|++.. ++|+|.|++||+|..
T Consensus 118 ~c~dideC~~~~~~C~~-g~C~n~~-gsy~C~C~~Gy~g~~ 156 (162)
T 1uzk_A 118 ILEDIDECQELPGLCQG-GKCINTF-GSFQCRCPTGYYLNE 156 (162)
T ss_dssp CEEECCHHHHCGGGGBT-SEEEECS-SCEEEECCTTCCBCT
T ss_pred ccCccccccCCCCCcCC-CEeEcCC-CCEEeeCCCCccCCC
Confidence 4468899985 56986 6999987 469999999998754
No 99
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.03 E-value=0.00014 Score=54.82 Aligned_cols=28 Identities=18% Similarity=0.460 Sum_probs=0.8
Q ss_pred CceEEeCCCCcc----CCcccccCCCCCCCCCC
Q psy11297 51 GLFECLCSPEFT----GYLCHTRAPPKLYDTPA 79 (132)
Q Consensus 51 ~~~~C~C~~g~~----G~~C~~~~~~c~~~~~~ 79 (132)
++|.|.|++||. |..| +++++|....+|
T Consensus 22 g~~~C~C~~G~~l~~~~~~C-~d~~eC~~~~~C 53 (386)
T 3v65_B 22 GAVQCTCHTGYRLTEDGRTC-QDVNECAEEGYC 53 (386)
T ss_dssp -------------------------------CC
T ss_pred CCcEeECCCCceECCCCCcc-CccceeCCcCcc
Confidence 359999999998 9999 677877533333
No 100
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=97.02 E-value=0.00029 Score=54.23 Aligned_cols=44 Identities=27% Similarity=0.762 Sum_probs=34.9
Q ss_pred cCCCCCCCCcccCCCCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCccccc
Q psy11297 18 VQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTR 69 (132)
Q Consensus 18 cp~~~~g~~C~~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~ 69 (132)
|+..+.|+.|+. .| .||.|+|+|.+. +++|.|++||+|.+|+..
T Consensus 189 C~~g~~G~~C~~---~C--~~C~~~G~C~~~---~g~C~C~~G~~G~~Ce~~ 232 (423)
T 2gy5_A 189 CEAQKWGPECNH---LC--TACMNNGVCHED---TGECICPPGFMGRTCEKA 232 (423)
T ss_dssp SCTTEESTTSCE---EC--CCCCTTCEECTT---TCCEECCTTEESTTSCEE
T ss_pred CCCCCCCCCCCC---CC--CCCCCCCEEECC---CCcEeCCCCccCCCcccc
Confidence 555555888874 45 389999999873 389999999999999975
No 101
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=96.98 E-value=0.00028 Score=49.69 Aligned_cols=43 Identities=23% Similarity=0.538 Sum_probs=36.6
Q ss_pred CCCCCcccCCCCCCCC---CCCCC--CeEeeCCCCceEEeCCCCccCCccccc
Q psy11297 22 QASPNLRLEESPCLSH---PCQNG--ATCQDEEDGLFECLCSPEFTGYLCHTR 69 (132)
Q Consensus 22 ~~g~~C~~~~~~C~~~---pC~ng--g~C~~~~~~~~~C~C~~g~~G~~C~~~ 69 (132)
|.|..|+.+...|..+ +|.++ |+|.. + +|.|.+||+|..|+..
T Consensus 168 ~~G~~Ce~~~~~C~~~~g~~C~~~~~G~C~~---g--~C~C~~G~~G~~C~~~ 215 (217)
T 2p28_B 168 IYGQYCECDTINCERYNGQVCGGPGRGLCFC---G--KCRCHPGFEGSACQHH 215 (217)
T ss_dssp EESTTSCEESSCSCEETTEETTCTTTEEEET---T--EEEECTTEESTTSCEE
T ss_pred EECCCcccCCccCCCCCCCCCCCCCCcEEeC---C--eeECCCCCccCCcCCC
Confidence 5699999777889876 89988 99983 3 8999999999999864
No 102
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.90 E-value=0.00072 Score=39.21 Aligned_cols=33 Identities=24% Similarity=0.603 Sum_probs=25.4
Q ss_pred CCCCCCC--CCCCCCCeEeeCCCCceEEeC-CCCccC
Q psy11297 30 EESPCLS--HPCQNGATCQDEEDGLFECLC-SPEFTG 63 (132)
Q Consensus 30 ~~~~C~~--~pC~ngg~C~~~~~~~~~C~C-~~g~~G 63 (132)
++++|.. ++|.++++|++.. ++|+|.+ ..||.+
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~-Gsy~C~~~~~g~~~ 37 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHY-GGYLCLPRSAAVIN 37 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETT-CCEEEEETTSCCCS
T ss_pred ccccccCCCCCCCCCCEeECCC-CCeEecccCCcccc
Confidence 6788875 6799889999998 5699995 455543
No 103
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=96.86 E-value=0.00029 Score=51.44 Aligned_cols=39 Identities=33% Similarity=0.749 Sum_probs=30.2
Q ss_pred cCCCCCC--CCCCCCCCeEeeCCCCceEEeCCCCcc--CCcccc
Q psy11297 29 LEESPCL--SHPCQNGATCQDEEDGLFECLCSPEFT--GYLCHT 68 (132)
Q Consensus 29 ~~~~~C~--~~pC~ngg~C~~~~~~~~~C~C~~g~~--G~~C~~ 68 (132)
+++++|. .++|..++.|++.. ++|.|.|.+||. |..|..
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~-Gsy~C~C~~Gy~GnG~~C~d 45 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYA-TGFCCRCVANYTGNGRQCVA 45 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECS-SCEEEEECTTEEECSSSEEE
T ss_pred ccchhccCCCCCCCCCCEeEcCC-CCeEEEcCCCCCCCCCcCCC
Confidence 5788997 57899899999998 569999999998 678854
No 104
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=96.65 E-value=0.00045 Score=54.29 Aligned_cols=51 Identities=16% Similarity=0.369 Sum_probs=8.8
Q ss_pred cCCCCCCCCccc----------CCCCCCCCCCCCCCeEeeCCC-CceEEeCCCCccCCcccc
Q psy11297 18 VQSSQASPNLRL----------EESPCLSHPCQNGATCQDEED-GLFECLCSPEFTGYLCHT 68 (132)
Q Consensus 18 cp~~~~g~~C~~----------~~~~C~~~pC~ngg~C~~~~~-~~~~C~C~~g~~G~~C~~ 68 (132)
|+..+.|.+|++ ..+.|.+.+|.+++.|...-+ .++.|.|++||+|.+|++
T Consensus 464 C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ceq 525 (525)
T 4aqs_A 464 CKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNE 525 (525)
T ss_dssp BCTTCCSTTTCC--------------------------------------------------
T ss_pred CCCCCcCCCcccCCCCccCCCCCCCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCCCCC
Confidence 666677999963 456788899999988875421 236899999999999985
No 105
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=96.56 E-value=0.00047 Score=53.00 Aligned_cols=28 Identities=46% Similarity=1.143 Sum_probs=0.0
Q ss_pred CCCCCCCeEeeCCCCceEEeCCCCccCCcccc
Q psy11297 37 HPCQNGATCQDEEDGLFECLCSPEFTGYLCHT 68 (132)
Q Consensus 37 ~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~ 68 (132)
.||+|||+|.+.. +|.|++||+|..|+.
T Consensus 371 ~~C~ngg~C~~~~----~C~C~~G~~G~~Ce~ 398 (426)
T 3zyj_B 371 LHCQNGGTCHNNV----RCLCPAAYTGILCEK 398 (426)
T ss_dssp --------------------------------
T ss_pred ccCCCCCCcCCCC----CCcCCCCCcCCCCcC
Confidence 5899999998753 899999999999975
No 106
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=96.50 E-value=0.0013 Score=53.49 Aligned_cols=52 Identities=19% Similarity=0.411 Sum_probs=39.7
Q ss_pred cCCCCCCCCcccCCC---------CCCCC----CCCCCCeEeeCCCCceEEeCC------CCccCCcccccCCCCC
Q psy11297 18 VQSSQASPNLRLEES---------PCLSH----PCQNGATCQDEEDGLFECLCS------PEFTGYLCHTRAPPKL 74 (132)
Q Consensus 18 cp~~~~g~~C~~~~~---------~C~~~----pC~ngg~C~~~~~~~~~C~C~------~g~~G~~C~~~~~~c~ 74 (132)
|+..+.|.+|+...+ .|... +|.++|+|.. + .|.|+ +||+|..|+.+...|.
T Consensus 450 C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~---G--~C~C~~~~~~~~G~~G~~Ce~~~~~C~ 520 (687)
T 3k6s_B 450 CDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC---G--QCLCHTSDVPGKLIYGQYCECDTINCE 520 (687)
T ss_dssp ECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEET---T--EEEECCCCSTTCCEESTTSCEESSCSC
T ss_pred cCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeC---C--EEEcCCCCCCCCCcccccccccccccc
Confidence 555666999985443 58753 5999999992 3 89999 9999999997666664
No 107
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.39 E-value=0.0012 Score=49.93 Aligned_cols=35 Identities=26% Similarity=0.515 Sum_probs=27.9
Q ss_pred CCCCCCCeEeeCCCCceEEeCCCCcc---CCcccccCCCCCC
Q psy11297 37 HPCQNGATCQDEEDGLFECLCSPEFT---GYLCHTRAPPKLY 75 (132)
Q Consensus 37 ~pC~ngg~C~~~~~~~~~C~C~~g~~---G~~C~~~~~~c~~ 75 (132)
..|. ++|++... +|.|.|++||. |..|+ ++++|..
T Consensus 8 ~~c~--~~C~~~~~-~y~C~C~~G~~~~~~~~C~-dideC~~ 45 (400)
T 3p5b_L 8 GGCS--HVCNDLKI-GYECLCPDGFQLVAQRRCE-DIDECQD 45 (400)
T ss_dssp GGCS--SEEEECSS-SEEEECCTTEEECSSSCEE-ECCCCST
T ss_pred CCCC--CEeECCCC-CeEEECCCCCCcCCCCccc-Cchhhhc
Confidence 4565 38999874 59999999998 89995 7888753
No 108
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=96.24 E-value=0.0016 Score=45.76 Aligned_cols=52 Identities=19% Similarity=0.356 Sum_probs=38.9
Q ss_pred cCCCCCCCCcccCCC---------CCC----CCCCCCCCeEeeCCCCceEEeCCCC------ccCCcccccCCCCC
Q psy11297 18 VQSSQASPNLRLEES---------PCL----SHPCQNGATCQDEEDGLFECLCSPE------FTGYLCHTRAPPKL 74 (132)
Q Consensus 18 cp~~~~g~~C~~~~~---------~C~----~~pC~ngg~C~~~~~~~~~C~C~~g------~~G~~C~~~~~~c~ 74 (132)
|+..+.|.+|+-..+ .|. ..+|.++|+|+. ..|.|.+| |+|..|+.+...|.
T Consensus 111 C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~-----g~C~C~~gw~~~~~~~G~~Ce~~~~~C~ 181 (217)
T 2p28_B 111 CDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-----GQCLCHTSDVPGKLIYGQYCECDTINCE 181 (217)
T ss_dssp ECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET-----TEEEECCCCSTTCCEESTTSCEESSCSC
T ss_pred CCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC-----CceECCCCCCCcccEECCCcccCCccCC
Confidence 455566999975432 364 578999999983 37999999 69999997766664
No 109
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=95.75 E-value=0.0066 Score=40.53 Aligned_cols=31 Identities=26% Similarity=0.651 Sum_probs=26.3
Q ss_pred CCCCCCeEeeCCC-CceEE-eCCCCccCCcccc
Q psy11297 38 PCQNGATCQDEED-GLFEC-LCSPEFTGYLCHT 68 (132)
Q Consensus 38 pC~ngg~C~~~~~-~~~~C-~C~~g~~G~~C~~ 68 (132)
||.|+++|..... +.+.| .|+++|+|.+|+.
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce~ 34 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCEL 34 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEESTTSCE
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcCCCCcC
Confidence 7999999987642 45899 7999999999986
No 110
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=95.46 E-value=0.012 Score=39.26 Aligned_cols=41 Identities=22% Similarity=0.583 Sum_probs=30.5
Q ss_pred CCCcccCCCCCCCCC-----CCCCCeEeeCCCCceEEeCCCCcc----CCccc
Q psy11297 24 SPNLRLEESPCLSHP-----CQNGATCQDEEDGLFECLCSPEFT----GYLCH 67 (132)
Q Consensus 24 g~~C~~~~~~C~~~p-----C~ngg~C~~~~~~~~~C~C~~g~~----G~~C~ 67 (132)
+..+..++++|...+ |.+ .|.+.. ++|.|.|++||. |..|+
T Consensus 117 ~~~~~~di~eC~~~~~~~~~C~~--~C~n~~-g~~~C~C~~Gy~l~~d~~~C~ 166 (170)
T 1szb_A 117 AFYAAEDIDECQVAPGEAPTCDH--HCHNHL-GGFYCSCRAGYVLHRNKRTCS 166 (170)
T ss_dssp EEEEEEECCTTCCCTTSCCSSSS--EEEEET-TEEEEECCTTEEECTTSSCEE
T ss_pred eeeeccccCcccCCCCCCCccCC--ccccCC-CCEEEeCCCCcEECCCCCccc
Confidence 344455778898655 875 799887 569999999997 56664
No 111
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.33 E-value=0.033 Score=45.97 Aligned_cols=41 Identities=24% Similarity=0.570 Sum_probs=31.5
Q ss_pred CCCCCCCCCCCC-----eEeeCCCCceEEeCCCCcc---CCcccccCCCCC
Q psy11297 32 SPCLSHPCQNGA-----TCQDEEDGLFECLCSPEFT---GYLCHTRAPPKL 74 (132)
Q Consensus 32 ~~C~~~pC~ngg-----~C~~~~~~~~~C~C~~g~~---G~~C~~~~~~c~ 74 (132)
..|..++|.++. .|++... +|.|.|++||. |..|+ ++++|.
T Consensus 308 ~~C~~~~C~~~~~~C~~~C~~~~~-~y~C~C~~Gy~l~~g~~C~-dideC~ 356 (791)
T 3m0c_C 308 KECGTNECLDNNGGCSHVCNDLKI-GYECLCPDGFQLVAQRRCE-DIDECQ 356 (791)
T ss_dssp TTBSCCSTTTGGGGCSSEEEECSB-SEEEECCTTCEEETTTEEE-CCCCCS
T ss_pred cccccccccccccCccccccCCCC-CcccCCCCCCccCCCCccc-cCcccC
Confidence 347777777654 8998874 59999999994 88896 677774
No 112
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=95.27 E-value=0.015 Score=31.70 Aligned_cols=38 Identities=26% Similarity=0.660 Sum_probs=26.7
Q ss_pred CCCCC--CCCCCCCeEeeCCCCceEEeCCCCcc----CCcccccCCCC
Q psy11297 32 SPCLS--HPCQNGATCQDEEDGLFECLCSPEFT----GYLCHTRAPPK 73 (132)
Q Consensus 32 ~~C~~--~pC~ngg~C~~~~~~~~~C~C~~g~~----G~~C~~~~~~c 73 (132)
++|.. .+|.+ .|++.. ++|+|.|++||. |..|. ++++|
T Consensus 2 dEC~~~~~~C~~--~C~nt~-Gsy~C~C~~Gy~L~~d~~~C~-didec 45 (55)
T 2jkh_L 2 KLCSLDNGDCDQ--FCHEEQ-NSVVCSCARGYTLADNGKACI-PTGPY 45 (55)
T ss_dssp CCTTTGGGGCSS--EEEEET-TEEEEECCTTEEECTTSSCEE-ESSSS
T ss_pred ccccCCCCCcCc--EeEcCC-CCeEEeCCCCCEECCCCCeec-cCccc
Confidence 45653 45753 899987 579999999995 56775 45544
No 113
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.90 E-value=0.039 Score=44.71 Aligned_cols=30 Identities=27% Similarity=0.535 Sum_probs=23.2
Q ss_pred CeEeeCCCCceEEeCCCCcc---CCcccccCCCCC
Q psy11297 43 ATCQDEEDGLFECLCSPEFT---GYLCHTRAPPKL 74 (132)
Q Consensus 43 g~C~~~~~~~~~C~C~~g~~---G~~C~~~~~~c~ 74 (132)
.+|.+... +|.|.|++||. |..|+ ++++|.
T Consensus 306 ~~C~~~~~-~~~C~C~~G~~~~~~~~C~-dideC~ 338 (699)
T 1n7d_A 306 HVCNDLKI-GYECLCPDGFQLVAQRRCE-DIDECQ 338 (699)
T ss_dssp TTCCCCTT-CCCCCCCSSSCCCSSSCCC-CCCCCS
T ss_pred CCcccCCC-CcEEeCCCCeEcCCCCccc-CccccC
Confidence 47887764 59999999998 77887 677774
No 114
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.54 E-value=0.023 Score=46.02 Aligned_cols=51 Identities=18% Similarity=0.332 Sum_probs=35.8
Q ss_pred cCCccCCeecCCCCC--CCCcccCCCCCC-CCCCCCCCeEeeCCCCceEEeCCCCccC
Q psy11297 9 RMGCLSASVVQSSQA--SPNLRLEESPCL-SHPCQNGATCQDEEDGLFECLCSPEFTG 63 (132)
Q Consensus 9 ~~~~~~~~~cp~~~~--g~~C~~~~~~C~-~~pC~ngg~C~~~~~~~~~C~C~~g~~G 63 (132)
..|-|....-+++.. |..|+ ++++|. ..+|. .+|++.. ++|+|.|++||.+
T Consensus 311 ~~~~~~C~C~~G~~~~~~~~C~-dideC~~~~~C~--~~C~n~~-g~y~C~C~~G~~~ 364 (699)
T 1n7d_A 311 LKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCVNLE-GGYKCQCEEGFQL 364 (699)
T ss_dssp CTTCCCCCCCSSSCCCSSSCCC-CCCCCSSSSSCT--TTCCBCS-SCBCCCCCSSCBC
T ss_pred CCCCcEEeCCCCeEcCCCCccc-CccccCCCCccc--cccccCC-CCeeeeeeccccc
Confidence 334444433344432 77887 889997 57886 4899987 4699999999975
No 115
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=94.16 E-value=0.18 Score=41.68 Aligned_cols=57 Identities=18% Similarity=0.357 Sum_probs=37.7
Q ss_pred eecCCccCCeecCCCC---CCCCcccCCCCCC-CCCCCCCCeEeeCCCCceEEeCCCCccC----Ccccc
Q psy11297 7 MKRMGCLSASVVQSSQ---ASPNLRLEESPCL-SHPCQNGATCQDEEDGLFECLCSPEFTG----YLCHT 68 (132)
Q Consensus 7 ~~~~~~~~~~~cp~~~---~g~~C~~~~~~C~-~~pC~ngg~C~~~~~~~~~C~C~~g~~G----~~C~~ 68 (132)
.+.+|-|... |+..| .|..|+ ++++|. ..+| +.+|++.. ++|+|.|++||.+ ..|..
T Consensus 327 ~~~~~~y~C~-C~~Gy~l~~g~~C~-dideC~~~~~C--~~~C~n~~-gsy~C~C~~Gy~l~~~~~~C~~ 391 (791)
T 3m0c_C 327 NDLKIGYECL-CPDGFQLVAQRRCE-DIDECQDPDTC--SQLCVNLE-GGYKCQCEEGFQLDPHTKACKA 391 (791)
T ss_dssp EECSBSEEEE-CCTTCEEETTTEEE-CCCCCSSSSSC--TTTCCBCS-SCBCCCCCSSEECCSSCCCCEE
T ss_pred cCCCCCcccC-CCCCCccCCCCccc-cCcccCCCCCC--CCeeecCC-CCceeecCCCCEeCCCCceeee
Confidence 3334434333 44444 478896 889997 3455 46899987 4699999999964 55643
No 116
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=93.84 E-value=0.032 Score=43.77 Aligned_cols=50 Identities=18% Similarity=0.274 Sum_probs=33.6
Q ss_pred cCCCCCCCCcccCCCCCCCCCCCCCCeEeeCC---CCceEEeCCCCccCCcccc
Q psy11297 18 VQSSQASPNLRLEESPCLSHPCQNGATCQDEE---DGLFECLCSPEFTGYLCHT 68 (132)
Q Consensus 18 cp~~~~g~~C~~~~~~C~~~pC~ngg~C~~~~---~~~~~C~C~~g~~G~~C~~ 68 (132)
|+..+.|..|+ ....|.+.+|.++++|.... ..++.|.|++||+|.+|++
T Consensus 423 C~~Gy~G~~c~-~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~ 475 (525)
T 4aqs_A 423 CKEGFYDLSAE-DPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQ 475 (525)
T ss_dssp ECTTEECCCTT-STTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC
T ss_pred CCCCCcCCCCC-CCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCccc
Confidence 33333355554 34568777888877776431 1246899999999999974
No 117
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=92.88 E-value=0.089 Score=30.03 Aligned_cols=42 Identities=19% Similarity=0.527 Sum_probs=28.7
Q ss_pred cCCCCCCC--CCCCCCCeEeeCCCCceEEeCCCCcc----CCcccccCCCC
Q psy11297 29 LEESPCLS--HPCQNGATCQDEEDGLFECLCSPEFT----GYLCHTRAPPK 73 (132)
Q Consensus 29 ~~~~~C~~--~pC~ngg~C~~~~~~~~~C~C~~g~~----G~~C~~~~~~c 73 (132)
.++++|.. ..|.+ .|++...++|+|.|+.||. |..|.. +++|
T Consensus 3 ~d~~eC~~~nggC~h--~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d-~dec 50 (69)
T 1kli_L 3 DDQLICVNENGGCEQ--YCSDHTGTKRSCRCHEGYSLLADGVSCTP-TVEY 50 (69)
T ss_dssp SCCCCTTSGGGGCSS--EEEEETTTEEEEECCTTEEECTTSSCEEE-CSSS
T ss_pred cccccccCCCCCcCC--EeEcCCCCCEEEeCCCCCeECCCCCcccC-cccc
Confidence 46778864 34653 7998873269999999984 667753 4443
No 118
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=92.75 E-value=0.085 Score=44.19 Aligned_cols=40 Identities=23% Similarity=0.491 Sum_probs=33.0
Q ss_pred CCCCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCcccccC
Q psy11297 30 EESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRA 70 (132)
Q Consensus 30 ~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~~ 70 (132)
+.++|.-+||+|++++.... ....|.|++++.|..|+...
T Consensus 496 e~~~c~C~PC~ngg~~~l~g-~~C~C~C~~g~~G~~Ce~~~ 535 (913)
T 3t5o_A 496 KFDPCQCAPCPNNGRPTLSG-TECLCVCQSGTYGENCEKQS 535 (913)
T ss_dssp TTCGGGSCCBTTTBEEEEET-TEEEEECCTTBCSTTSCCBC
T ss_pred ccccccCCCCCCCCEeecCC-CceEEEccCCccccCccCcc
Confidence 34567667999999999765 35899999999999998865
No 119
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=92.46 E-value=0.13 Score=27.67 Aligned_cols=29 Identities=21% Similarity=0.512 Sum_probs=21.4
Q ss_pred eEeeCCCCceEEeCCCCcc----CCcccccCCCC
Q psy11297 44 TCQDEEDGLFECLCSPEFT----GYLCHTRAPPK 73 (132)
Q Consensus 44 ~C~~~~~~~~~C~C~~g~~----G~~C~~~~~~c 73 (132)
.|++...++|+|.|++||. |..|. ++++|
T Consensus 12 ~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~-d~dec 44 (53)
T 2bz6_L 12 YCSDHTGTKRSCRCHEGYSLLADGVSCT-PTVEY 44 (53)
T ss_dssp EEEEETTTEEEEECCTTEEECTTSSCEE-ECSSS
T ss_pred EeEcCCCCCEEeeCCCCCEECCCCCccc-CCccc
Confidence 6888773269999999985 67785 45554
No 120
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=92.05 E-value=0.17 Score=33.00 Aligned_cols=36 Identities=28% Similarity=0.669 Sum_probs=26.7
Q ss_pred cCCCCCCC---CCCCCCCeEeeCCCCceEEeCCCCcc----CCccc
Q psy11297 29 LEESPCLS---HPCQNGATCQDEEDGLFECLCSPEFT----GYLCH 67 (132)
Q Consensus 29 ~~~~~C~~---~pC~ngg~C~~~~~~~~~C~C~~g~~----G~~C~ 67 (132)
.++++|.. .+|. ..|.+.. ++|.|.|.+||. |..|+
T Consensus 115 ~d~~eC~~~~~~~C~--~~C~n~~-g~~~C~C~~Gy~l~~~~~~C~ 157 (159)
T 1nzi_A 115 TDINECTDFVDVPCS--HFCNNFI-GGYFCSCPPEYFLHDDMKNCG 157 (159)
T ss_dssp EECCTTTC-CCCCSS--SEEEEET-TEEEEECCTTCEECTTSSCEE
T ss_pred ccCcccCCCCCCCCC--CcccCcC-CCEEEecCCCcEECCCCCccc
Confidence 45678875 3564 5898886 569999999997 56664
No 121
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=90.97 E-value=0.26 Score=26.82 Aligned_cols=26 Identities=23% Similarity=0.254 Sum_probs=21.5
Q ss_pred CCcccccCCCCCCCCCCCCCcceEEec
Q psy11297 63 GYLCHTRAPPKLYDTPAFNGSSHIVMK 89 (132)
Q Consensus 63 G~~C~~~~~~c~~~~~~~~g~~~~~~~ 89 (132)
|..|+.++++|. +.||.+++.+...+
T Consensus 1 G~~c~~~~~eC~-s~pC~NgGtC~~~~ 26 (55)
T 3u7u_G 1 GTSHLVKCAEKE-KTFCVNGGECFMVK 26 (55)
T ss_dssp --CCEEECCSTT-TTTSCTTCEEEEEC
T ss_pred CCCCcccCCCCc-CCCCCCCCCcCCCC
Confidence 678999999998 89999999998754
No 122
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=90.68 E-value=0.1 Score=27.79 Aligned_cols=27 Identities=19% Similarity=0.562 Sum_probs=20.1
Q ss_pred eEeeCCCCceEEeCCCCcc----CCcccccCCC
Q psy11297 44 TCQDEEDGLFECLCSPEFT----GYLCHTRAPP 72 (132)
Q Consensus 44 ~C~~~~~~~~~C~C~~g~~----G~~C~~~~~~ 72 (132)
.|++.. ++|+|.|++||. |..|. ++++
T Consensus 11 ~C~n~~-gs~~C~C~~Gy~L~~d~~tC~-dide 41 (51)
T 1kig_L 11 FCREER-SEVRCSCAHGYVLGDDSKSCV-STER 41 (51)
T ss_dssp CCCEET-TEECCCCCTTEEECTTSSCEE-ECSS
T ss_pred EeEcCC-CCeEEeCCCCcEECCCCCccc-cCCc
Confidence 577776 579999999995 67775 3444
No 123
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=88.46 E-value=0.081 Score=35.14 Aligned_cols=48 Identities=21% Similarity=0.390 Sum_probs=30.9
Q ss_pred cCCCCCCCCccc-------------CCCCCCCCCCCCCC------eEeeCCCCceEEeCCCCccCCcccc
Q psy11297 18 VQSSQASPNLRL-------------EESPCLSHPCQNGA------TCQDEEDGLFECLCSPEFTGYLCHT 68 (132)
Q Consensus 18 cp~~~~g~~C~~-------------~~~~C~~~pC~ngg------~C~~~~~~~~~C~C~~g~~G~~C~~ 68 (132)
|...+.|.+|++ ..+.|.+=+|.+.| +|... +..|.|+++|+|.+|++
T Consensus 80 C~~g~~G~~Ce~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~---tG~C~C~~g~~G~~Cd~ 146 (162)
T 1klo_A 80 CIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPV---TGQCQCLPHVSGRDCGT 146 (162)
T ss_dssp BCTTEETTTTCEECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTT---TCCCCBCTTEESTTCCE
T ss_pred CCCCCcCCCcCcCchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCC---CCEeECCCCCcCCCCCC
Confidence 455556777753 11234444566654 56543 25899999999999985
No 124
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=87.93 E-value=0.36 Score=38.20 Aligned_cols=40 Identities=30% Similarity=0.688 Sum_probs=31.1
Q ss_pred CCCC---CCCCCCCCeEeeCCCCceEEeCCCCccC--CcccccCC
Q psy11297 32 SPCL---SHPCQNGATCQDEEDGLFECLCSPEFTG--YLCHTRAP 71 (132)
Q Consensus 32 ~~C~---~~pC~ngg~C~~~~~~~~~C~C~~g~~G--~~C~~~~~ 71 (132)
+.|. .+||..++.|+....+.|.|.|+.||.| ..|..+.+
T Consensus 19 ~~c~~~~~~~c~~~a~C~~~~~~~~~c~C~~G~ag~G~~c~~D~D 63 (551)
T 3fby_A 19 RFCPDGSPSECHEHADCVLERDGSRSCVCAVGWAGNGILCGRDTD 63 (551)
T ss_dssp CBCTTSSBCCCCTTEEEEECTTSCEEEEECTTEESSSSSCEECTT
T ss_pred ccCCCCCCCCCCCCCeeEeCCCCCEecCCCCCCCCCCcccCccCC
Confidence 4563 4789999999988767789999999975 57776543
No 125
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=86.15 E-value=0.66 Score=33.42 Aligned_cols=31 Identities=23% Similarity=0.473 Sum_probs=20.4
Q ss_pred CCCCCCCC-----CCCCCCeEeeCC-----CCceEEeCCCCcc
Q psy11297 30 EESPCLSH-----PCQNGATCQDEE-----DGLFECLCSPEFT 62 (132)
Q Consensus 30 ~~~~C~~~-----pC~ngg~C~~~~-----~~~~~C~C~~g~~ 62 (132)
..++|..+ .|. ..|.... .++|+|.|+.||.
T Consensus 266 ~~n~C~~~~~~ng~Cs--~~C~~~p~~~~~~~~~~C~C~~g~~ 306 (316)
T 1ijq_A 266 GVNWCERTTLSNGGCQ--YLCLPAPQINPHSPKFTCACPDGML 306 (316)
T ss_dssp CCCTTSSSSSGGGGCS--SEEEECCCCSTTCCSEEEECCTTCE
T ss_pred ccccccccccCCCCcC--cccCCCccccCCCCCeEeeCCCCCE
Confidence 34667655 354 2788653 2369999999984
No 126
>1lr7_A Follistatin, FS1; heparin-binding, cystine-rich, sucrose octasulphate, hormone/growth factor complex; HET: SO4; 1.50A {Rattus norvegicus} SCOP: g.3.11.3 g.68.1.1 PDB: 1lr8_A* 1lr9_A
Probab=84.28 E-value=1.2 Score=25.39 Aligned_cols=29 Identities=24% Similarity=0.714 Sum_probs=23.6
Q ss_pred CCCCCCCCCCCCCeEeeCCCCceEEeCCC
Q psy11297 31 ESPCLSHPCQNGATCQDEEDGLFECLCSP 59 (132)
Q Consensus 31 ~~~C~~~pC~ngg~C~~~~~~~~~C~C~~ 59 (132)
+++|...+|..|..|+....+...|.|+.
T Consensus 1 ~~~C~~~~C~~g~~C~~~~~~~~~C~C~~ 29 (74)
T 1lr7_A 1 METCENVDCGPGKKCRMNKKNKPRCVCAP 29 (74)
T ss_dssp -CCSTTCCCCTTEEEEECTTSCEEEEECC
T ss_pred CCCCCCCcCcCCCEEeECCCCCeeecCCC
Confidence 36899999999999998665667899954
No 127
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=83.09 E-value=0.42 Score=30.19 Aligned_cols=42 Identities=14% Similarity=0.318 Sum_probs=29.9
Q ss_pred ecCCCCCCCCcccCCCCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCcccc
Q psy11297 17 VVQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHT 68 (132)
Q Consensus 17 ~cp~~~~g~~C~~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~ 68 (132)
.||..+.|.+|+.+++ .+|.++ .. ..|++.+..+++|..|+.
T Consensus 22 ~Cp~g~~G~~Ce~~~~----~~C~~g-----~G-~~YrG~~~~t~sG~~Cq~ 63 (122)
T 2fd6_A 22 NCPKKFGGQHCEIDKS----KTCYEG-----NG-HFYRGKASTDTMGRPCLP 63 (122)
T ss_dssp ECCTTEESTTSCEESS----CCSBCS-----SC-TTCCSCCCBBTTSCBBCC
T ss_pred cCCCCCCCccccccCc----CCCccc-----cc-ccceeeccccccCCcccC
Confidence 4677788999987654 234433 12 259999999999999975
No 128
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=81.92 E-value=1.2 Score=24.22 Aligned_cols=25 Identities=20% Similarity=0.630 Sum_probs=19.1
Q ss_pred eEeeCCCCceEEeCCCCcc----CCcccc
Q psy11297 44 TCQDEEDGLFECLCSPEFT----GYLCHT 68 (132)
Q Consensus 44 ~C~~~~~~~~~C~C~~g~~----G~~C~~ 68 (132)
.|++...++|.|.|++||. |..|..
T Consensus 12 ~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d 40 (59)
T 2wph_E 12 FCKNSADNKVVCSCTEGYRLAENQKSCEP 40 (59)
T ss_dssp EEEECSTTCEEEECCTTEEECTTSSCEEE
T ss_pred EeEeCCCCCEEeeCCCCcEECCCCCcccC
Confidence 6888763369999999984 567764
No 129
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=80.95 E-value=3 Score=30.42 Aligned_cols=34 Identities=26% Similarity=0.824 Sum_probs=18.8
Q ss_pred CCCC-CCCCCCCCeEeeCCCCceEEeCCCCcc----CCcccc
Q psy11297 32 SPCL-SHPCQNGATCQDEEDGLFECLCSPEFT----GYLCHT 68 (132)
Q Consensus 32 ~~C~-~~pC~ngg~C~~~~~~~~~C~C~~g~~----G~~C~~ 68 (132)
++|. ...|.+ .|.+.. ++|.|.|++||. +..|..
T Consensus 2 ~ec~~~~~C~~--~C~n~~-g~~~C~C~~g~~l~~d~~~C~~ 40 (349)
T 3v64_C 2 NECAEEGYCSQ--GCTNSE-GAFQCWCEAGYELRPDRRSCKA 40 (349)
T ss_dssp -------CCSS--EECCC----CCEECCTTEEECTTSSCEEE
T ss_pred cccCCCCCCcC--eeecCC-CCeEEECCCCccCCCCCCcccc
Confidence 4564 244654 788877 569999999985 556754
No 130
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=76.67 E-value=0.62 Score=38.11 Aligned_cols=48 Identities=25% Similarity=0.630 Sum_probs=36.7
Q ss_pred ecCCCCCCCCcccCCCCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCcccccCC
Q psy11297 17 VVQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRAP 71 (132)
Q Consensus 17 ~cp~~~~g~~C~~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~~~ 71 (132)
+|...+.|.+|... ..|.. .|..+|.|+. | .|.|.+||+|..|+....
T Consensus 521 ~C~~gw~g~dc~i~-~~Cp~-~C~ghG~C~~---G--~C~Cd~G~~G~~C~~~~~ 568 (725)
T 2e26_A 521 DKQQTWAIDNVYIG-DGCLD-MCSGHGRCVQ---G--SCVCDEQWGGLYCDEPET 568 (725)
T ss_dssp CTTCCEEEEEEEEE-SCSSG-GGGGSEEEET---T--EEEECTTEESTTSCEESS
T ss_pred ccCCCccccccccc-CCCCc-ccCCCcEECC---C--CEeeCCCccCCCcCccCC
Confidence 45566668888722 46765 7999999995 3 799999999999987543
No 131
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=72.27 E-value=3 Score=25.45 Aligned_cols=39 Identities=21% Similarity=0.514 Sum_probs=29.3
Q ss_pred CCCCCCCCCCCCeEeeCCCCceEEeCCCCccC--CcccccC
Q psy11297 32 SPCLSHPCQNGATCQDEEDGLFECLCSPEFTG--YLCHTRA 70 (132)
Q Consensus 32 ~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G--~~C~~~~ 70 (132)
..|..+-|..++.|.....+..+|.|.+||.| ..|....
T Consensus 5 h~C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~ 45 (99)
T 1ob1_C 5 HQCVKKQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENP 45 (99)
T ss_dssp TCCCSCCCCTTEEEECCTTSCCEEEECTTEEEETTEEEECS
T ss_pred eEeccCCCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeCC
Confidence 34666777788899876556799999999974 5676654
No 132
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=70.68 E-value=1.6 Score=33.58 Aligned_cols=53 Identities=9% Similarity=0.204 Sum_probs=18.7
Q ss_pred cCCCCCCCCcccCCCCCCCCCCCCCCeEeeCCCCceEEe-CCCCccCCcccccC
Q psy11297 18 VQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECL-CSPEFTGYLCHTRA 70 (132)
Q Consensus 18 cp~~~~g~~C~~~~~~C~~~pC~ngg~C~~~~~~~~~C~-C~~g~~G~~C~~~~ 70 (132)
|+....|.+|+.-.......|+.+++.|.........|. |+-++.|..|+...
T Consensus 317 C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t 370 (426)
T 3zyj_B 317 CEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNEL 370 (426)
T ss_dssp CCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC-----------
T ss_pred CCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccCc
Confidence 455555666764444444556655533221111124443 33344566665544
No 133
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=67.21 E-value=5.4 Score=24.53 Aligned_cols=40 Identities=25% Similarity=0.402 Sum_probs=30.8
Q ss_pred CCCCCCCCCCCCeEeeCCCCceEEeCCCCcc--CCcccccCCC
Q psy11297 32 SPCLSHPCQNGATCQDEEDGLFECLCSPEFT--GYLCHTRAPP 72 (132)
Q Consensus 32 ~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~--G~~C~~~~~~ 72 (132)
+.|...-|..++.|.....+..+|.|..||. |..|... +.
T Consensus 11 h~C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~~-Np 52 (105)
T 1n1i_A 11 HKCIDTNVPENAACYRYLDGTEEWRCLLGFKEVGGKCVPA-SI 52 (105)
T ss_dssp TSCCSSCCCTTEEEEECTTSCEEEEECTTEEECSSSEEEC-CC
T ss_pred cEecCCCCCCCCCeEECCCCCEeEEEECCeeccCCEEEEC-Cc
Confidence 4577777888899998655778999999996 5577765 44
No 134
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=65.96 E-value=3.8 Score=29.90 Aligned_cols=28 Identities=21% Similarity=0.680 Sum_probs=19.4
Q ss_pred CCCCCCC--CCCCCeEeeCCCCceEEeCCCCcc
Q psy11297 32 SPCLSHP--CQNGATCQDEEDGLFECLCSPEFT 62 (132)
Q Consensus 32 ~~C~~~p--C~ngg~C~~~~~~~~~C~C~~g~~ 62 (132)
++|..+. |. -.|..... +|+|.|+.||.
T Consensus 305 n~C~~~~g~C~--~lCl~~~~-~~~C~C~~g~~ 334 (349)
T 3v64_C 305 NRCGDNNGGCT--HLCLPSGQ-NYTCACPTGFR 334 (349)
T ss_dssp CTTTTGGGGCS--SEEECCTT-SCEEECCTTEE
T ss_pred CcccCCCCCcc--cEeecCCC-CCeeECCCCCc
Confidence 4555433 43 27887775 59999999985
No 135
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=62.63 E-value=8.8 Score=27.63 Aligned_cols=19 Identities=16% Similarity=0.558 Sum_probs=14.4
Q ss_pred eEeeCCCC-ceEEeCCCCcc
Q psy11297 44 TCQDEEDG-LFECLCSPEFT 62 (132)
Q Consensus 44 ~C~~~~~~-~~~C~C~~g~~ 62 (132)
.|.....+ +|+|.|+.||.
T Consensus 280 ~C~~~~~~~~~~C~C~~g~~ 299 (318)
T 3sov_A 280 LCLMSPVKPFYQCACPTGVK 299 (318)
T ss_dssp EEEECSSTTSEEEECSTTCC
T ss_pred EEecCCCCCCeEEECCCCCE
Confidence 68766532 59999999984
No 136
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=61.03 E-value=5.4 Score=30.05 Aligned_cols=28 Identities=21% Similarity=0.423 Sum_probs=20.6
Q ss_pred CeEeeCCCCceEEeCCCCccCCcccccC
Q psy11297 43 ATCQDEEDGLFECLCSPEFTGYLCHTRA 70 (132)
Q Consensus 43 g~C~~~~~~~~~C~C~~g~~G~~C~~~~ 70 (132)
..|.....+++.|.|..++.|..|++-.
T Consensus 262 s~c~~~~~~~~~C~C~~nt~G~~Ce~C~ 289 (375)
T 4aqt_A 262 SECVKNEFDKLMCNCKHNTYGVDCEKCL 289 (375)
T ss_dssp SCEEECTTSCEEECCCTTEESTTSCEEC
T ss_pred cccCCCCCCCeeeeCcCCCcCCCcccCC
Confidence 3454443345899999999999998744
No 137
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=58.56 E-value=8.3 Score=29.02 Aligned_cols=16 Identities=25% Similarity=0.563 Sum_probs=13.7
Q ss_pred eEE-eCCCCccCCcccc
Q psy11297 53 FEC-LCSPEFTGYLCHT 68 (132)
Q Consensus 53 ~~C-~C~~g~~G~~C~~ 68 (132)
-.| .|.++++|.+|+.
T Consensus 334 G~C~~C~~n~~G~~Ce~ 350 (375)
T 4aqt_A 334 GHCTNCRDNTDGAKCER 350 (375)
T ss_dssp EEECSCTTTEESTTSCE
T ss_pred CCCCCCCCCCcCCCCCC
Confidence 578 4999999999975
No 138
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=57.56 E-value=8.1 Score=30.81 Aligned_cols=37 Identities=24% Similarity=0.570 Sum_probs=25.6
Q ss_pred CCCCCCCC--CCCCCCeEeeCCCCceEEeCCCCcc----CCcccc
Q psy11297 30 EESPCLSH--PCQNGATCQDEEDGLFECLCSPEFT----GYLCHT 68 (132)
Q Consensus 30 ~~~~C~~~--pC~ngg~C~~~~~~~~~C~C~~g~~----G~~C~~ 68 (132)
..++|..+ .|. -.|.....++|+|.|+.||. |..|..
T Consensus 264 ~~n~C~~~ng~C~--~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~ 306 (628)
T 4a0p_A 264 GWNECASSNGHCS--HLCLAVPVGGFVCGCPAHYSLNADNRTCSA 306 (628)
T ss_dssp CCCTTTTTGGGCS--SEEEEETTTEEEEECSTTCEECTTSSCEEC
T ss_pred cceEeccCCCCcc--hhhhcCCCCCeeEEcCCCcEecccCCcCcc
Confidence 45677643 454 37887764579999999984 566754
No 139
>3hh2_C Follistatin; protein-protein complex, TB domain, cystine knot motif, TGF- fold, disulfide linked dimer, CLE PAIR of basic residues, cytokine; HET: CIT; 2.15A {Homo sapiens} PDB: 2b0u_C* 2p6a_D
Probab=57.01 E-value=12 Score=27.05 Aligned_cols=36 Identities=25% Similarity=0.635 Sum_probs=28.9
Q ss_pred CCCcccCCCCCCCCCCCCCCeEeeCCCCceEEeCCC
Q psy11297 24 SPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSP 59 (132)
Q Consensus 24 g~~C~~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~ 59 (132)
.++|..-.++|....|..|..|+....+..+|.|+.
T Consensus 56 ~~~C~pckd~C~~v~C~~g~~C~~~~~g~~~CvC~~ 91 (288)
T 3hh2_C 56 APNCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAP 91 (288)
T ss_dssp BSSCEESCSSSTTCCCCTTEEEEECTTSCEEEEECC
T ss_pred CCCCchhcccCCCCcCCCCCEeeECCCCCeeeeCCc
Confidence 346876678999999999999997555668999864
No 140
>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*
Probab=56.94 E-value=9 Score=26.70 Aligned_cols=27 Identities=33% Similarity=0.960 Sum_probs=22.8
Q ss_pred CCCCCCCCCCCCCeEeeCCCCceEEeC
Q psy11297 31 ESPCLSHPCQNGATCQDEEDGLFECLC 57 (132)
Q Consensus 31 ~~~C~~~pC~ngg~C~~~~~~~~~C~C 57 (132)
.++|....|..|..|+....+...|.|
T Consensus 3 ~dpC~~~~C~~g~~C~~~~~~~~~CvC 29 (229)
T 1nub_A 3 LAPCQNHHCKHGKVCELDENNTPMCVC 29 (229)
T ss_dssp -CTTTTCCCCTTEEEEECTTCCEEEEE
T ss_pred CCCCCCCcCCCCCEeeeCCCCCeeeec
Confidence 479999999999999986556689999
No 141
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=55.87 E-value=5.7 Score=25.71 Aligned_cols=41 Identities=15% Similarity=0.341 Sum_probs=25.8
Q ss_pred cCCCCCCCCcccCCCCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCcccc
Q psy11297 18 VQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHT 68 (132)
Q Consensus 18 cp~~~~g~~C~~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~ 68 (132)
||..+.|.+|+.+.+. .|.++ ....|+.......+|..|+.
T Consensus 35 Cp~g~~G~~Cei~~~~----~C~~g------~G~~YrG~~s~T~sG~~Cq~ 75 (145)
T 2i9a_A 35 CPKKFGGQHCEIDKSK----TCYEG------NGHFYRGKASTDTMGRPCLP 75 (145)
T ss_dssp CCTTEESTTSCEESSC----CEECT------TCTTCCSCCCBBTTSCBCCC
T ss_pred CCCCCCCCceeccccc----cCCCC------CccccccceecCCcCCcccC
Confidence 5666778888765432 23322 22358778877788888864
No 142
>2arp_F Follistatin; cystine knot, disulfide rich, EGF domain, kazal domain, PROT complex, hormone-growth factor complex; HET: 1PG; 2.00A {Rattus norvegicus}
Probab=55.72 E-value=11 Score=24.30 Aligned_cols=28 Identities=25% Similarity=0.763 Sum_probs=22.5
Q ss_pred CCCCCCCCCCCCeEeeCCCCceEEeCCC
Q psy11297 32 SPCLSHPCQNGATCQDEEDGLFECLCSP 59 (132)
Q Consensus 32 ~~C~~~pC~ngg~C~~~~~~~~~C~C~~ 59 (132)
++|....|..|..|+....+...|.|+.
T Consensus 4 ~~C~~~~C~~g~~C~~~~~~~~~C~C~~ 31 (152)
T 2arp_F 4 ETCENVDCGPGKKCRMNKKNKPRCVCAP 31 (152)
T ss_dssp -CCTTCCCCTTEEEEECTTSCEEEEECC
T ss_pred CCCCCCcCCCCCEeeeCCCCCeeecCCC
Confidence 6899999999999997655668999864
No 143
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=54.66 E-value=5.3 Score=28.26 Aligned_cols=34 Identities=21% Similarity=0.638 Sum_probs=23.2
Q ss_pred CCCCCC---CCCCCCeEeeCCCCceEEeCCCCcc----CCcccc
Q psy11297 32 SPCLSH---PCQNGATCQDEEDGLFECLCSPEFT----GYLCHT 68 (132)
Q Consensus 32 ~~C~~~---pC~ngg~C~~~~~~~~~C~C~~g~~----G~~C~~ 68 (132)
|+|... .|.+ .|.+.. ++|+|.|..||. ++.|..
T Consensus 3 ~eC~~~~~~~C~~--~C~~~~-~~~~C~C~~G~~l~~d~~sC~p 43 (283)
T 3f1s_B 3 NECHPERTDGCQH--FCLPGQ-ESYTCSCAQGYRLGEDHKQCVP 43 (283)
T ss_dssp CCCCSSCSSSCSS--BCCCCT-TSCCCBCCTTEEECTTSSCEEE
T ss_pred CccCCCCCCCCCC--EeeCCC-CCeEecCCCCcccCCCCCcccc
Confidence 566543 5543 688776 469999999974 566764
No 144
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=51.95 E-value=10 Score=29.95 Aligned_cols=38 Identities=24% Similarity=0.401 Sum_probs=27.0
Q ss_pred CCCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCccccc
Q psy11297 31 ESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTR 69 (132)
Q Consensus 31 ~~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~ 69 (132)
.++|.-.||.+++.....+ +.=.|.|..|+.|..|+..
T Consensus 464 ~~~c~c~pC~~~g~~~~~g-t~C~c~C~~G~~G~~C~~~ 501 (554)
T 3ojy_A 464 FNACRCGPCFNNGVPILEG-TSCRCQCRLGSLGAACEQT 501 (554)
T ss_dssp TCGGGSCCCTTTCCEEEET-TEEEECCCSSCCSSSCC--
T ss_pred cccccccccCCCCEEcCCC-CcccccCCCCCCCCCcccC
Confidence 4556556999998875554 3356788999999999764
No 145
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=43.95 E-value=16 Score=28.77 Aligned_cols=37 Identities=24% Similarity=0.581 Sum_probs=27.8
Q ss_pred CCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCccccc
Q psy11297 32 SPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTR 69 (132)
Q Consensus 32 ~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~ 69 (132)
++|.=.||.+++...... +.-.|.|+.++.|..|+..
T Consensus 447 ~~c~C~pC~~~~~~~~~g-t~C~c~C~~g~~G~~c~~~ 483 (537)
T 3ojy_B 447 SSCHCAPCQGNGVPVLKG-SRCDCICPVGSQGLACEVS 483 (537)
T ss_dssp CGGGSCCCSTTCEEEEET-TEEEEECCTTEETGGGCEE
T ss_pred CcccCCCCCcCCEEecCC-CceeccCCCCcccccccCC
Confidence 344334999999887654 3467889999999999874
No 146
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=43.01 E-value=9.7 Score=27.47 Aligned_cols=16 Identities=25% Similarity=0.767 Sum_probs=13.8
Q ss_pred EEeCCCCccCCccccc
Q psy11297 54 ECLCSPEFTGYLCHTR 69 (132)
Q Consensus 54 ~C~C~~g~~G~~C~~~ 69 (132)
.|.|.+||.|..|+=.
T Consensus 208 ~C~C~~g~~G~~CeC~ 223 (280)
T 2p26_A 208 ICRCDTGYIGKNCECQ 223 (280)
T ss_dssp EEEECTTEESTTSCEE
T ss_pred ceeCCCCCcCCcceec
Confidence 6899999999999743
No 147
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=42.18 E-value=17 Score=28.91 Aligned_cols=29 Identities=24% Similarity=0.681 Sum_probs=20.0
Q ss_pred CCCCCCC--CCCCCCeEeeCCCCceEEeCCCCcc
Q psy11297 31 ESPCLSH--PCQNGATCQDEEDGLFECLCSPEFT 62 (132)
Q Consensus 31 ~~~C~~~--pC~ngg~C~~~~~~~~~C~C~~g~~ 62 (132)
.++|..+ .|. ..|.+... +|+|.|+.||.
T Consensus 578 ~~~C~~~ng~C~--~~C~~~~~-~~~C~C~~g~~ 608 (619)
T 3s94_A 578 SNPCAEENGGCS--HLCLYRPQ-GLRCACPIGFE 608 (619)
T ss_dssp CCGGGSGGGGCS--SEEEEETT-EEEEECCTTCE
T ss_pred cccCCCCCCChh--HhhccCCC-CeEEECCCCCE
Confidence 4556532 354 37888874 59999999984
No 148
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=42.14 E-value=20 Score=27.26 Aligned_cols=17 Identities=35% Similarity=0.587 Sum_probs=14.9
Q ss_pred ceEEe-CCCCccCCcccc
Q psy11297 52 LFECL-CSPEFTGYLCHT 68 (132)
Q Consensus 52 ~~~C~-C~~g~~G~~C~~ 68 (132)
+-.|. |..++.|.+|+.
T Consensus 356 ~G~C~~C~~nt~G~~CEr 373 (403)
T 2y38_A 356 GGVCLDCQHHTTGINCER 373 (403)
T ss_dssp CEEESSCCSSEESTTSCE
T ss_pred CCCCCCCcCcCcCCCCCc
Confidence 47996 999999999986
No 149
>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens}
Probab=41.45 E-value=80 Score=21.36 Aligned_cols=41 Identities=15% Similarity=0.225 Sum_probs=26.0
Q ss_pred ccCCceeEEEEEEEEeCCCCe-EEEEeccCCCCCCCeEEEEEc
Q psy11297 90 TLKAYNKLSIEIEFKTNKNDG-ILLYNQQNLDGTGDFVSLAIV 131 (132)
Q Consensus 90 ~~~~~~~~~i~~~f~t~~~~g-~ll~~~~~~~~~~d~~~l~l~ 131 (132)
.++...+..|.++|++..... .||..... .....|+.|.|.
T Consensus 35 ~lk~L~~gTI~v~fks~~~~~q~LfSIsN~-k~~n~yf~lyi~ 76 (191)
T 2v73_A 35 KFSSLEEGTIVTRFNMNDTSIQSLIGLSDG-NKANNYFSLYVS 76 (191)
T ss_dssp GTTTCSSEEEEEEEEECCCSCEEEEEEECT-TCSSCEEEEEEC
T ss_pred HhcCcCCcEEEEEEecCCCcceEEEEccCC-CCccceEEEEEe
Confidence 345566788999999887432 33433332 335778888775
No 150
>1as5_A Conotoxin Y-PIIIE; neurotoxin, acetylcholine; HET: HYP; NMR {Conus purpurascens} SCOP: j.30.1.4 PDB: 1jlo_A*
Probab=41.44 E-value=9.3 Score=16.83 Aligned_cols=11 Identities=55% Similarity=0.646 Sum_probs=7.8
Q ss_pred cCCccCCeecC
Q psy11297 9 RMGCLSASVVQ 19 (132)
Q Consensus 9 ~~~~~~~~~cp 19 (132)
-+||+++..|.
T Consensus 13 ~pgc~~a~cc~ 23 (26)
T 1as5_A 13 YPGCSSASCCQ 23 (26)
T ss_dssp CTTCTTCCCSC
T ss_pred CCCcchhhhhc
Confidence 46888877764
No 151
>2pe4_A Hyaluronidase-1; hyaluronan, EGF-like domain, hydrolase; HET: NAG BMA MAN; 2.00A {Homo sapiens}
Probab=39.28 E-value=14 Score=28.33 Aligned_cols=19 Identities=26% Similarity=0.822 Sum_probs=16.9
Q ss_pred ceEEeCCCCccCCcccccC
Q psy11297 52 LFECLCSPEFTGYLCHTRA 70 (132)
Q Consensus 52 ~~~C~C~~g~~G~~C~~~~ 70 (132)
.|.|.|-.||.|..|++..
T Consensus 396 ~F~C~Cy~gw~G~~C~~~~ 414 (424)
T 2pe4_A 396 EFKCRCYPGWQAPWCERKS 414 (424)
T ss_dssp HEEEEECTTBCTTTTCSBC
T ss_pred CcEeeccCCCCcccccCCC
Confidence 4899999999999999765
No 152
>4deq_A Neuropilin-1, vascular endothelial growth factor; coagulation factor domain, heparin binding domain, angiogene protein binding-cytokine complex; 2.65A {Homo sapiens} PDB: 1kmx_A 1vgh_A 2vgh_A
Probab=39.23 E-value=2.8 Score=29.07 Aligned_cols=57 Identities=30% Similarity=0.519 Sum_probs=35.9
Q ss_pred eeEeecCCccCCeecCCCCCCCCcccCCCCCCCCCCCCCCeEeeCCCCceEEeCCCCccCCcccccC
Q psy11297 4 LVRMKRMGCLSASVVQSSQASPNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRA 70 (132)
Q Consensus 4 ~~~~~~~~~~~~~~cp~~~~g~~C~~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~~ 70 (132)
-.|+-.-||-....+++.... ++|. ||.+..++...... ++|.|.-.+++..|....
T Consensus 147 ~lRvElyGC~~~~~v~~~~~~-------~~~~--~~~~~~~~~~~~~~-~~c~~~~~~~~~~c~~~~ 203 (218)
T 4deq_A 147 SMRFEVYGCKITDYVDGSGSG-------SPCG--PCSERRKHLFVQDP-QTCKCSCKNTDSRCKARQ 203 (218)
T ss_dssp CBEEEEEEECTTTCCCCSCCC-------CCCC--CCCSSSTTSEEECT-TTCCEEESSCHHHHHTTT
T ss_pred EEEEEEEeeccccccCCcccC-------CCCC--ccccCCcccccCCC-cceEccCCcccccccccc
Confidence 356777788766555543212 3454 67777766443322 778888889998997644
No 153
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=34.40 E-value=43 Score=26.57 Aligned_cols=25 Identities=20% Similarity=0.622 Sum_probs=17.6
Q ss_pred eEeeCCC-CceEEeCCCCcc----CCcccc
Q psy11297 44 TCQDEED-GLFECLCSPEFT----GYLCHT 68 (132)
Q Consensus 44 ~C~~~~~-~~~~C~C~~g~~----G~~C~~ 68 (132)
.|..... .+|+|.|+.||. |..|..
T Consensus 285 lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~ 314 (619)
T 3s94_A 285 LCLMSPVKPFYQCACPTGVKLLENGKTCKD 314 (619)
T ss_dssp EEEECSSTTSEEEECCTTCCBCTTSSCBCS
T ss_pred eEECCCCCCCceEeCCchheecccCcccCC
Confidence 6776542 259999999984 566754
No 154
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=32.44 E-value=14 Score=28.71 Aligned_cols=14 Identities=36% Similarity=1.032 Sum_probs=7.0
Q ss_pred EEeCCCCccCCccc
Q psy11297 54 ECLCSPEFTGYLCH 67 (132)
Q Consensus 54 ~C~C~~g~~G~~C~ 67 (132)
.|.|.+||.|..||
T Consensus 459 ~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 459 VCRCGPGWLGSQCE 472 (472)
T ss_dssp EEEECTTC------
T ss_pred ceECcCCCCCCCCC
Confidence 57899999999996
No 155
>3sek_C Follistatin-related protein 3; protein-protein complex, TB domain, cystine knot motif, TGF- fold, disulfide linked dimer, follistatin domain (FSD); HET: NAG; 2.40A {Homo sapiens} PDB: 2kcx_A
Probab=32.42 E-value=44 Score=22.93 Aligned_cols=34 Identities=24% Similarity=0.497 Sum_probs=24.8
Q ss_pred CCcccCCCCCCCCCCCCCCeEeeCCCCceEEeCCC
Q psy11297 25 PNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSP 59 (132)
Q Consensus 25 ~~C~~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~ 59 (132)
..|..-.++|....|..|..|+... +...|.|+.
T Consensus 55 ~~C~pckd~C~~v~C~~G~~C~~~~-~~p~CvC~~ 88 (209)
T 3sek_C 55 VHCLPCKDSCDGVECGPGKACRMLG-GRPRCECAP 88 (209)
T ss_dssp SCCEESCSSSTTCCCCTTEEEEC-----CEEEECC
T ss_pred ccCccCcCcCCCCcCCCCCCCcccC-CeeeccCCC
Confidence 4576546899999999999999775 457899864
No 156
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=28.84 E-value=19 Score=29.55 Aligned_cols=27 Identities=26% Similarity=0.886 Sum_probs=22.1
Q ss_pred CCCCCCeEeeCCCCceEEeCCCCccCCcccc
Q psy11297 38 PCQNGATCQDEEDGLFECLCSPEFTGYLCHT 68 (132)
Q Consensus 38 pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~ 68 (132)
.|..+|.|+.. -.|.|-+||.|..|..
T Consensus 191 ~C~g~G~C~~~----~~C~C~~g~~g~~C~~ 217 (725)
T 2e26_A 191 MCYGHGSCING----TKCICDPGYSGPTCKI 217 (725)
T ss_dssp GGGGSEEEETT----TEEEECTTEESTTSCE
T ss_pred ccCCCcEecCC----CeeeccCCcccCcccc
Confidence 57778899632 5899999999999985
No 157
>1jlp_A PSI-conotoxin PIIIF; multiple disulfide bonds, amidated C-terminus; HET: HYP; NMR {Synthetic} SCOP: j.30.1.4
Probab=28.83 E-value=16 Score=15.89 Aligned_cols=10 Identities=30% Similarity=0.457 Sum_probs=6.8
Q ss_pred cCCccCCeec
Q psy11297 9 RMGCLSASVV 18 (132)
Q Consensus 9 ~~~~~~~~~c 18 (132)
-+|||.+..|
T Consensus 13 fpgcynalcc 22 (26)
T 1jlp_A 13 FPGCYNALCC 22 (26)
T ss_dssp CTTTTTSSTT
T ss_pred CCchhhhhhe
Confidence 3688877665
No 158
>1nl1_A Prothrombin; hydrolase; HET: CGU NAG; 1.90A {Bos taurus} SCOP: g.14.1.1 g.32.1.1 PDB: 2pf2_A* 2pf1_A* 1nl2_A* 2spt_A*
Probab=26.65 E-value=11 Score=24.45 Aligned_cols=29 Identities=17% Similarity=0.350 Sum_probs=21.7
Q ss_pred CCCCCeEeeCCCCceEEeCCCCccCCcccc
Q psy11297 39 CQNGATCQDEEDGLFECLCSPEFTGYLCHT 68 (132)
Q Consensus 39 C~ngg~C~~~~~~~~~C~C~~g~~G~~C~~ 68 (132)
|.+ +.|.......|+.......+|..|+.
T Consensus 61 C~~-g~C~~g~G~~YRG~~s~T~sG~~Cq~ 89 (147)
T 1nl1_A 61 CLE-GNCAEGVGMNYRGNVSVTRSGIECQL 89 (147)
T ss_dssp HHH-TSSBCTTSTTCCCCCCBBTTSCBBCC
T ss_pred CCC-CcCCCCCCCccccccccCCCCCcCCC
Confidence 666 57876653358899888889999974
No 159
>2kgu_A Purotoxin-1; P2X receptor; NMR {Geolycosa}
Probab=26.48 E-value=62 Score=15.62 Aligned_cols=26 Identities=27% Similarity=0.832 Sum_probs=16.0
Q ss_pred CCCCCCCCCCCCCeEeeCCCCceEEeC
Q psy11297 31 ESPCLSHPCQNGATCQDEEDGLFECLC 57 (132)
Q Consensus 31 ~~~C~~~pC~ngg~C~~~~~~~~~C~C 57 (132)
-..|...||-++-.|+=+..+ ..|.|
T Consensus 7 y~~C~~~~CC~~r~C~Cs~~g-~nC~C 32 (35)
T 2kgu_A 7 GIRCDDIHCCTGLKCKCNASG-YNCVC 32 (35)
T ss_dssp TCCCSSSCBCTTCEEECCSSS-CCCEE
T ss_pred ccccCCccCcCCCCeEEeccC-CeeEE
Confidence 345666888887777744433 44554
No 160
>4a94_C Carboxypeptidase inhibitor; hydrolase-hydrolase inhibitor complex, CPA4, NVCI, PCI, LCI; 1.70A {Nerita versicolor}
Probab=24.47 E-value=50 Score=16.75 Aligned_cols=14 Identities=29% Similarity=0.612 Sum_probs=9.5
Q ss_pred CCCCCCCCeEeeCC
Q psy11297 36 SHPCQNGATCQDEE 49 (132)
Q Consensus 36 ~~pC~ngg~C~~~~ 49 (132)
..||.|.|+|..-.
T Consensus 6 drpcinpgrcplvp 19 (53)
T 4a94_C 6 DRPCINPGRCPLVP 19 (53)
T ss_dssp CBCCSSCCCCTTST
T ss_pred CCcccCCCcCcccc
Confidence 45778888886544
No 161
>1imt_A MIT1, intestinal toxin 1; venom, structural homologue of colipase, resistance to endoproteases, contract guinea PIG ileum; NMR {Dendroaspis polylepis polylepis} SCOP: g.3.10.1 g.3.10.1
Probab=24.19 E-value=47 Score=19.12 Aligned_cols=19 Identities=32% Similarity=0.852 Sum_probs=10.8
Q ss_pred CCCCCCeEeeCCCCceEEe
Q psy11297 38 PCQNGATCQDEEDGLFECL 56 (132)
Q Consensus 38 pC~ngg~C~~~~~~~~~C~ 56 (132)
||..|-+|.....+.|+|.
T Consensus 60 PC~~GL~C~~~~~~~~~~~ 78 (80)
T 1imt_A 60 PCAPNLACVQTSPKKFKCL 78 (80)
T ss_dssp CBCTTCEEEEEETTEEEEE
T ss_pred CCCCCCEeccCCCCceeec
Confidence 5666666665533445554
No 162
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=24.14 E-value=83 Score=18.79 Aligned_cols=39 Identities=23% Similarity=0.363 Sum_probs=30.1
Q ss_pred CCCCCCCCCCCCeEeeCCCCceEEeCCCCcc--CCcccccC
Q psy11297 32 SPCLSHPCQNGATCQDEEDGLFECLCSPEFT--GYLCHTRA 70 (132)
Q Consensus 32 ~~C~~~pC~ngg~C~~~~~~~~~C~C~~g~~--G~~C~~~~ 70 (132)
+.|...-|.-++.|....++.-.|.|.++|. |..|..+.
T Consensus 5 h~C~~tkcp~NA~Cyr~~dg~EecRCllnykk~~~kCV~~~ 45 (95)
T 1b9w_A 5 HRCIDTNVPENAACYRYLDGTEEWRCLLYFKEDAGKCVPAP 45 (95)
T ss_dssp GSCSSCCCCTTEEEEECTTSCEEEEECTTEEEETTEEEECT
T ss_pred cccccCCCCCCcCeEEEcCCCEEEEEECCeEecCCEEEcCC
Confidence 4577778888899998665678999999984 66776654
No 163
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=24.12 E-value=58 Score=25.87 Aligned_cols=19 Identities=26% Similarity=0.637 Sum_probs=14.5
Q ss_pred eEeeCCCCceEEeCCCCcc
Q psy11297 44 TCQDEEDGLFECLCSPEFT 62 (132)
Q Consensus 44 ~C~~~~~~~~~C~C~~g~~ 62 (132)
.|.....+.++|.|+.|+.
T Consensus 592 ~C~~~~~~~~~C~C~~g~~ 610 (628)
T 4a0p_A 592 ICLVKGDGTTRCSCPMHLV 610 (628)
T ss_dssp EEEECTTSCEEEECCTTEE
T ss_pred hcccCCCCCeeeeCCCCCE
Confidence 6777654568999999974
No 164
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=23.74 E-value=17 Score=28.56 Aligned_cols=29 Identities=34% Similarity=0.894 Sum_probs=0.0
Q ss_pred CCCeEeeCCCCceE---EeCCCCccCCcccccC
Q psy11297 41 NGATCQDEEDGLFE---CLCSPEFTGYLCHTRA 70 (132)
Q Consensus 41 ngg~C~~~~~~~~~---C~C~~g~~G~~C~~~~ 70 (132)
+...|... +|.+. |.|.+||.|..|+=+-
T Consensus 465 ~s~~C~~g-~G~~~CG~C~C~~G~~G~~CeC~~ 496 (503)
T 3v4v_B 465 QAPHCSDG-QGHLQCGVCSCAPGRLGRLCESRG 496 (503)
T ss_dssp ---------------------------------
T ss_pred CCcccCCC-CeeEeCCceECcCCCcCCCCCCCC
Confidence 34566522 24464 5799999999998543
No 165
>3b4v_C Follistatin-like 3; ligand-inhibitor signalling complex, cleavage on PAIR of BAS residues, glycoprotein, growth factor, hormone, secreted; HET: NAG; 2.48A {Homo sapiens}
Probab=21.71 E-value=78 Score=21.96 Aligned_cols=34 Identities=24% Similarity=0.497 Sum_probs=23.8
Q ss_pred CCcccCCCCCCCCCCCCCCeEeeCCCCceEEeCCC
Q psy11297 25 PNLRLEESPCLSHPCQNGATCQDEEDGLFECLCSP 59 (132)
Q Consensus 25 ~~C~~~~~~C~~~pC~ngg~C~~~~~~~~~C~C~~ 59 (132)
..|..-.++|....|..+..|+... +.-.|.|+.
T Consensus 64 ~~c~pc~~~C~~~~C~~g~~C~~~~-g~p~C~C~~ 97 (237)
T 3b4v_C 64 VHCLPCKDSCDGVECGPGKACRMLG-GRPRCECAP 97 (237)
T ss_dssp CCCEESCSSSTTCCCCTTEEEEC-----CEEEECC
T ss_pred CCCccccCCCCCccCcCCCCCcccC-CCccccCCC
Confidence 3565445789999999999999765 457899865
No 166
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=20.43 E-value=35 Score=26.72 Aligned_cols=34 Identities=32% Similarity=0.868 Sum_probs=26.1
Q ss_pred CCCC----CCCCCCCeEeeCCCCceEEeCCCCccCCcccccC
Q psy11297 33 PCLS----HPCQNGATCQDEEDGLFECLCSPEFTGYLCHTRA 70 (132)
Q Consensus 33 ~C~~----~pC~ngg~C~~~~~~~~~C~C~~g~~G~~C~~~~ 70 (132)
.|.. ..|...|.|.+. -.|.|..||..+.|+...
T Consensus 446 ~C~~~~~~~~C~~~GVCNn~----~~CHC~~GwaPP~C~~~~ 483 (510)
T 3g5c_A 446 TCLSSKEGTICSGNGVCSNE----LKCVCNRHWIGSDCNTYF 483 (510)
T ss_dssp CCCCSSTTCSGGGTEEEBTT----SCEEECTTEESTTSCEEC
T ss_pred CCCCcccccccCCCCeeCCC----CCcCCCCCCCCCCCCCCC
Confidence 4654 348888888754 479999999999998754
Done!