Your job contains 1 sequence.
>psy11302
MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY
NVNLNDVIQLMIKADIDKNYQSSESSSKENIQPNGPACKPNINTENASSSGNNTEPEDFV
DLKPADSQYYKVGDYVDAILETEGAWFESQITHILVDINKEKPYDEDDLIFKVVHLKYKD
DGSSTMKFDDIRPLPKHLITEFNENLIGVRVMGNYNAEEPRERGYWHDMIIEKKQGKRLT
TELIATVFIGKKGLETRLENCKIKFVKELYKIESPKLLAERTAEDEDHMSTEPKTLRQIV
PECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWF
CPSCKRDTSEVIAPGQKLKDSKKKARMASTNSKSTRDWGKGMACVGRTKVCTIVPSDHFG
PIPGIEVGQSYLYRFQASEAGVHRPHVSGIHGREDVGAFSLVLSGGYEDDVDDGDSFLYT
GSGGRDLSGNKRTSVQSFDQTLTRMNKALARNCNAPIDDKRGNEAVDWKKGKPVRVMRNF
HGAKHSKYAPKEGNRYDGIYKVVKYYPVKGSSDFIVWRFHLQRDDEAPAPWTEEGKKRIK
DLGLQMIYPEGYEEAQAAKEASKANLKRKVSSETLGESKVKKSKQVYTLPSSVLEHINND
TVHSNVWDEIKALCKEGQKEVLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFK
IESDACNSCPYCRKEMNKSCLETHSNDALQSILSTLFPGYSSAR
The BLAST search returned 12 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11302
(764 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1PJN4 - symbol:UHRF1 "Uncharacterized protein"... 1581 5.2e-186 2
UNIPROTKB|A7E320 - symbol:UHRF1 "E3 ubiquitin-protein lig... 1562 4.2e-184 2
UNIPROTKB|B6CHA3 - symbol:uhrf1 "E3 ubiquitin-protein lig... 1770 2.0e-182 1
UNIPROTKB|F1S7K1 - symbol:UHRF1 "Uncharacterized protein"... 1547 7.1e-180 2
UNIPROTKB|Q96T88 - symbol:UHRF1 "E3 ubiquitin-protein lig... 1540 6.3e-179 2
UNIPROTKB|F6UA42 - symbol:uhrf1 "E3 ubiquitin-protein lig... 1725 1.2e-177 1
RGD|1309990 - symbol:Uhrf2 "ubiquitin-like with PHD and r... 1464 3.7e-172 2
UNIPROTKB|Q96PU4 - symbol:UHRF2 "E3 ubiquitin-protein lig... 1447 8.8e-171 2
UNIPROTKB|E2RKA4 - symbol:UHRF2 "Uncharacterized protein"... 1456 1.1e-170 2
MGI|MGI:1923718 - symbol:Uhrf2 "ubiquitin-like, containin... 1449 3.0e-170 2
ZFIN|ZDB-GENE-040426-2039 - symbol:uhrf1 "ubiquitin-like,... 1646 2.8e-169 1
MGI|MGI:1338889 - symbol:Uhrf1 "ubiquitin-like, containin... 1605 6.2e-165 1
UNIPROTKB|F1MFX7 - symbol:F1MFX7 "Uncharacterized protein... 1472 9.3e-165 2
RGD|1595855 - symbol:Uhrf1 "ubiquitin-like with PHD and r... 1602 1.3e-164 1
UNIPROTKB|F1NS44 - symbol:F1NS44 "Uncharacterized protein... 1384 5.5e-156 2
UNIPROTKB|F1P4F7 - symbol:UHRF1 "Uncharacterized protein"... 1520 6.3e-156 1
TAIR|locus:2009420 - symbol:VIM1 "AT1G57820" species:3702... 404 6.7e-46 3
TAIR|locus:2164835 - symbol:VIM3 "VARIANT IN METHYLATION ... 386 6.8e-43 3
TAIR|locus:2013840 - symbol:VIM2 "VARIANT IN METHYLATION ... 386 1.7e-42 3
TAIR|locus:2013800 - symbol:VIM4 "VARIANT IN METHYLATION ... 386 2.1e-42 3
TAIR|locus:2009425 - symbol:VIM5 "VARIANT IN METHYLATION ... 335 6.7e-38 3
UNIPROTKB|I3LTW3 - symbol:I3LTW3 "Uncharacterized protein... 398 3.1e-36 1
TAIR|locus:2138591 - symbol:ORTHL "ORTHRUS-like" species:... 216 2.2e-17 2
TAIR|locus:2065988 - symbol:SUVH6 "SU(VAR)3-9 homolog 6" ... 240 1.6e-16 1
TAIR|locus:2063384 - symbol:SUVH5 "SU(VAR)3-9 homolog 5" ... 239 2.1e-16 1
TAIR|locus:2159133 - symbol:SUVH4 "SU(VAR)3-9 homolog 4" ... 182 2.2e-10 1
TAIR|locus:2051083 - symbol:SUVH2 "SU(VAR)3-9 homolog 2" ... 149 4.2e-10 2
TAIR|locus:2175289 - symbol:SUVH1 "SU(VAR)3-9 homolog 1" ... 148 3.9e-09 2
MGI|MGI:95049 - symbol:Ubl4 "ubiquitin-like 4" species:10... 140 1.8e-08 1
RGD|1563983 - symbol:Ubl4a "ubiquitin-like 4A" species:10... 140 1.8e-08 1
ASPGD|ASPL0000072359 - symbol:ubi1 species:162425 "Emeric... 123 2.7e-08 2
TAIR|locus:2014440 - symbol:AT1G53930 "AT1G53930" species... 138 3.0e-08 1
TAIR|locus:2195945 - symbol:AT1G77250 "AT1G77250" species... 159 5.1e-08 1
SGD|S000004157 - symbol:RPS31 "Fusion protein cleaved to ... 119 8.9e-08 2
RGD|708360 - symbol:Phrf1 "PHD and ring finger domains 1"... 163 9.2e-08 1
UNIPROTKB|Q63625 - symbol:Phrf1 "PHD and RING finger doma... 163 9.2e-08 1
UNIPROTKB|C1BHN7 - symbol:ubl4ab "Ubiquitin-like protein ... 133 1.0e-07 1
UNIPROTKB|B2KIK3 - symbol:UBL4A "Ubiquitin-like protein 4... 130 2.1e-07 1
UNIPROTKB|B5X9S9 - symbol:ubl4ab "Ubiquitin-like protein ... 129 2.7e-07 1
WB|WBGene00016200 - symbol:dpff-1 species:6239 "Caenorhab... 148 4.3e-07 1
UNIPROTKB|B0KWT6 - symbol:UBL4A "Ubiquitin-like protein 4... 127 4.5e-07 1
TAIR|locus:2030953 - symbol:SUVH7 "SU(VAR)3-9 homolog 7" ... 109 4.5e-07 2
UNIPROTKB|P11441 - symbol:UBL4A "Ubiquitin-like protein 4... 126 5.7e-07 1
UNIPROTKB|B1MTV8 - symbol:UBL4A "Ubiquitin-like protein 4... 126 5.7e-07 1
UNIPROTKB|Q5R4T1 - symbol:UBL4A "Ubiquitin-like protein 4... 126 5.7e-07 1
ZFIN|ZDB-GENE-040426-1089 - symbol:zgc:56596 "zgc:56596" ... 126 5.7e-07 1
UNIPROTKB|C3KHF2 - symbol:ubl4a "Ubiquitin-like protein 4... 125 7.3e-07 1
TAIR|locus:2140827 - symbol:SUVH9 "SU(VAR)3-9 homolog 9" ... 149 8.9e-07 1
UNIPROTKB|I3LCE6 - symbol:BAZ1B "Uncharacterized protein"... 153 9.4e-07 1
ZFIN|ZDB-GENE-120215-90 - symbol:si:ch73-39g20.1 "si:ch73... 152 1.0e-06 1
UNIPROTKB|I3LUY7 - symbol:I3LUY7 "Uncharacterized protein... 123 1.2e-06 1
UNIPROTKB|P79781 - symbol:RPS27A "Ubiquitin-40S ribosomal... 122 1.5e-06 1
UNIPROTKB|P62992 - symbol:RPS27A "Ubiquitin-40S ribosomal... 122 1.5e-06 1
UNIPROTKB|F1PEZ4 - symbol:RPS27A "Uncharacterized protein... 122 1.5e-06 1
UNIPROTKB|P62979 - symbol:RPS27A "Ubiquitin-40S ribosomal... 122 1.5e-06 1
UNIPROTKB|F2Z5U0 - symbol:RPS27A "Uncharacterized protein... 122 1.5e-06 1
UNIPROTKB|B5XFI8 - symbol:ubl4aa "Ubiquitin-like protein ... 122 1.5e-06 1
MGI|MGI:1925544 - symbol:Rps27a "ribosomal protein S27A" ... 122 1.5e-06 1
UNIPROTKB|P62982 - symbol:Rps27a "Ubiquitin-40S ribosomal... 122 1.5e-06 1
CGD|CAL0002668 - symbol:TRY3 species:5476 "Candida albica... 145 1.6e-06 1
UNIPROTKB|Q5A1M4 - symbol:CaO19.1971 "Potential zinc RING... 145 1.6e-06 1
ZFIN|ZDB-GENE-030131-624 - symbol:phrf1 "PHD and ring fin... 151 1.8e-06 1
UNIPROTKB|F1P5W9 - symbol:BAZ1B "Uncharacterized protein"... 151 1.9e-06 2
UNIPROTKB|C1BGZ8 - symbol:ubl4aa "Ubiquitin-like protein ... 121 2.0e-06 1
UNIPROTKB|G3V661 - symbol:Baz1b "Bromodomain adjacent to ... 150 2.0e-06 1
MGI|MGI:1353499 - symbol:Baz1b "bromodomain adjacent to z... 150 2.0e-06 1
UNIPROTKB|C1BXU5 - symbol:ubl4a "Ubiquitin-like protein 4... 120 2.5e-06 1
UNIPROTKB|E1B6X6 - symbol:BAZ1B "Uncharacterized protein"... 149 2.5e-06 1
UNIPROTKB|Q9UIG0 - symbol:BAZ1B "Tyrosine-protein kinase ... 149 2.5e-06 1
UNIPROTKB|I3L5Q3 - symbol:UBL4A "Uncharacterized protein"... 131 2.8e-06 1
UNIPROTKB|J9P3J2 - symbol:BAZ1B "Uncharacterized protein"... 148 3.0e-06 1
UNIPROTKB|F1M9H9 - symbol:F1M9H9 "Uncharacterized protein... 117 3.1e-06 2
UNIPROTKB|B7NZQ9 - symbol:UBL4A "Ubiquitin-like protein 4... 119 3.2e-06 1
POMBASE|SPAC11G7.04 - symbol:ubi1 "ribosomal-ubiquitin fu... 119 3.2e-06 1
POMBASE|SPAC1805.12c - symbol:uep1 "ribosomal-ubiquitin f... 119 3.2e-06 1
POMBASE|SPAC589.10c - symbol:SPAC589.10c "ribosomal-ubiqu... 119 3.2e-06 1
POMBASE|SPAC6G10.11c - symbol:ubi3 "ribosomal-ubiquitin f... 119 3.2e-06 1
SGD|S000001410 - symbol:RPL40A "Ubiquitin-ribosomal 60S s... 119 3.2e-06 1
SGD|S000001802 - symbol:RPL40B "Ubiquitin-ribosomal 60S s... 119 3.2e-06 1
UNIPROTKB|E2RED7 - symbol:BAZ1B "Uncharacterized protein"... 148 3.2e-06 1
UNIPROTKB|J9PAU7 - symbol:BAZ1B "Uncharacterized protein"... 148 3.2e-06 1
ZFIN|ZDB-GENE-040813-1 - symbol:rnf114 "ring finger prote... 133 4.1e-06 1
UNIPROTKB|D4A0Y0 - symbol:D4A0Y0 "Uncharacterized protein... 118 4.1e-06 1
TAIR|locus:2028005 - symbol:AT1G23410 species:3702 "Arabi... 118 4.1e-06 1
TAIR|locus:2053496 - symbol:UBQ2 "ubiquitin extension pro... 118 4.1e-06 1
TAIR|locus:2041459 - symbol:UBQ6 "ubiquitin 6" species:37... 118 4.1e-06 1
TAIR|locus:2079924 - symbol:UBQ1 "ubiquitin extension pro... 118 4.1e-06 1
TAIR|locus:2098003 - symbol:UBQ5 "ubiquitin 5" species:37... 118 4.1e-06 1
TAIR|locus:505006295 - symbol:UBQ7 "AT2G35635" species:37... 118 4.1e-06 1
TAIR|locus:2197525 - symbol:RUB1 "AT1G31340" species:3702... 118 4.1e-06 1
UNIPROTKB|F1NGE3 - symbol:UBB "Polyubiquitin-B" species:9... 117 5.2e-06 1
UNIPROTKB|Q91021 - symbol:UBB "Ubiquitin" species:9031 "G... 117 5.2e-06 1
UNIPROTKB|F5H265 - symbol:UBC "Polyubiquitin-C" species:9... 117 5.2e-06 1
UNIPROTKB|F5H388 - symbol:UBC "Polyubiquitin-C" species:9... 117 5.2e-06 1
UNIPROTKB|F5H7Y5 - symbol:UBC "Polyubiquitin-C" species:9... 117 5.2e-06 1
UNIPROTKB|G3V9Z2 - symbol:LOC100360548 "Protein LOC100360... 117 5.2e-06 1
UNIPROTKB|F5H2Z3 - symbol:UBC "Polyubiquitin-C" species:9... 117 5.2e-06 1
FB|FBgn0003941 - symbol:RpL40 "Ribosomal protein L40" spe... 117 5.2e-06 1
FB|FBgn0003942 - symbol:RpS27A "Ribosomal protein S27A" s... 117 5.2e-06 1
UNIPROTKB|F2Z4K9 - symbol:UBB "Polyubiquitin-B" species:9... 117 5.2e-06 1
WARNING: Descriptions of 248 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|F1PJN4 [details] [associations]
symbol:UHRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042393 "histone binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 Gene3D:2.30.30.30
InterPro:IPR014722 Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296
OMA:HVEPGLQ InterPro:IPR021991 Pfam:PF12148 EMBL:AAEX03012542
EMBL:AAEX03012543 EMBL:AAEX03012544 EMBL:AAEX03012540
EMBL:AAEX03012541 Ensembl:ENSCAFT00000030070 Uniprot:F1PJN4
Length = 792
Score = 1581 (561.6 bits), Expect = 5.2e-186, Sum P(2) = 5.2e-186
Identities = 315/655 (48%), Positives = 425/655 (64%)
Query: 1 MYVKIRSLDGS-KNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFD 59
M++++R++DG + V LS+ T + +++ +I+ V QRLFY+GKQ+ED + LFD
Sbjct: 1 MWIQVRTMDGKVAHTVDSLSRLTKVEELRRKIQELFHVEPGLQRLFYRGKQMEDGHTLFD 60
Query: 60 YNVNLNDVIQLMIKADIDKNYQSSESSSKENIQPNGPACKPNINTENASSSGNN-TEPED 118
Y+V LND IQL+++ + +S+ E + C ++ +S+SG +E +
Sbjct: 61 YDVRLNDTIQLLVRQSLVLPPSNSKERDSELSDTDSGCCLGQSESDKSSNSGEAASEADG 120
Query: 119 FVDLKPADSQ------YYKVGDYVDAILETEGAWFESQITHILVDI-NKEKPYD------ 165
L D+ YKV +YVDA GAWFE+Q+ + ++++P
Sbjct: 121 KAGLADEDTWDETELGLYKVNEYVDARDTNMGAWFEAQVVRVTRKAPSQDEPCSSTSSST 180
Query: 166 -EDDLIFKVVHLKYKDDGSSTMKFDDIRPLPKHLITEFNENLIGVRVMGNYNAEEPRERG 224
EDD+I+ V + Y ++G M D+R ++++ ++ E +G VM NYN + P+ERG
Sbjct: 181 PEDDVIYHVKYDDYPENGVVQMSSRDVRARARNIL-KWQELEVGQVVMLNYNPDNPKERG 239
Query: 225 YWHDMIIEKKQGKRLTTELIATVFIGKKGLETRLENCKIKFVKELYKIESPKLLAERTAE 284
+W+D I +K+ R EL A V IG L +C+I FV E++KIE P E +
Sbjct: 240 FWYDAEILRKRETRTARELYANVRIGGDSLN----DCRIIFVDEVFKIEHP---GEGSPV 292
Query: 285 DEDHMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHYYHIW 344
E+ M R+ P C C D E+K C+ C C +C GK PDK ++C+EC +HI+
Sbjct: 293 IENPMR------RKSGPSCKHCKDDESKTCRVCACHLCGGKQDPDKQLMCDECDMAFHIY 346
Query: 345 CLKPPLESVPEDDEWFCPSCKRDTSEVIAPGQKLKDSKKKARMASTNSKSTRDWGKGMAC 404
CL+PPL S+P++DEW+CP C+ D SEV+ G+KLK+SKKKA+MAS S S RDWGKGMAC
Sbjct: 347 CLRPPLSSIPKEDEWYCPECRNDASEVVLAGEKLKESKKKAKMASATSSSQRDWGKGMAC 406
Query: 405 VGRTKVCTIVPSDHFGPIPGIEVGQSYLYRFQASEAGVHRPHVSGIHGREDVGAFSLVLS 464
VGRTK CTIVPS+H+GPIPGI VG + +R Q SE+GVHRPHV+GIHGR + GA+SLVL+
Sbjct: 407 VGRTKECTIVPSNHYGPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLA 466
Query: 465 GGYEDDVDDGDSFLYTGSGGRDLSGNKRTSVQSFDQTLTRMNKALARNCNAPIDDKRGNE 524
GGYEDDVD G+SF YTGSGGRDLSGNKRT+ QS DQ LT N+ALA NC+API+D++G E
Sbjct: 467 GGYEDDVDHGNSFTYTGSGGRDLSGNKRTAEQSCDQKLTNTNRALALNCSAPINDRKGAE 526
Query: 525 AVDWKKGKPVRVMRNFHGAKHSKYAPKEGNRYDGIYKVVKYYPVKGSSDFIVWRFHLQRD 584
A DW+ GKPVRV+RN G KHSKYAP EGNRYDGIYKVV+Y+P KG S F+VWR+ L+RD
Sbjct: 527 AKDWRSGKPVRVVRNVKGRKHSKYAPAEGNRYDGIYKVVRYWPEKGKSGFLVWRYLLRRD 586
Query: 585 DEAPAPWTEEGKKRIKDLGLQMIYPEGYXXXXXXXXXXXXNLKRKVSSETLGESK 639
D P PWT+EGK RIK LGL M YPEGY N KR+ E GE +
Sbjct: 587 DTEPGPWTKEGKDRIKKLGLTMQYPEGYLEARARKEKEKENSKREAEEEE-GEEE 640
Score = 245 (91.3 bits), Expect = 5.2e-186, Sum P(2) = 5.2e-186
Identities = 53/126 (42%), Positives = 73/126 (57%)
Query: 641 KKSK-QVYTLPSSVLEHINNDTVHSNVWDEIKALCKEGQ-KEVLEHIQEKFLCIICQELV 698
KKSK + Y+L + I D ++ +W EI K+G ++ L ++E F CI CQELV
Sbjct: 671 KKSKVEPYSLTAQQSSLIKEDESNTKLWSEILKSLKDGPFQKFLSKVEEAFQCICCQELV 730
Query: 699 YKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKSCLETHSNDALQSILSTLFP 758
Y+PIT C H C DCL R+F+ + SCP CR ++ +S N LQ+IL+ LFP
Sbjct: 731 YRPITTVCQHNVCKDCLDRSFRAQ---VFSCPACRYDLGRS-YAMQVNQPLQAILNQLFP 786
Query: 759 GYSSAR 764
GY S R
Sbjct: 787 GYGSGR 792
>UNIPROTKB|A7E320 [details] [associations]
symbol:UHRF1 "E3 ubiquitin-protein ligase UHRF1"
species:9913 "Bos taurus" [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0005657 "replication fork" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0000791 "euchromatin"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0035064 "methylated histone residue binding" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0016574 "histone ubiquitination"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0031493 "nucleosomal
histone binding" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0010390 "histone monoubiquitination"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0006351 GO:GO:0000122 GO:GO:0007049 GO:GO:0000790
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787
GO:GO:0051865 GO:GO:0000792 GO:GO:0005657 GO:GO:0016574
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
eggNOG:COG3440 KO:K10638 Gene3D:2.30.280.10 EMBL:DAAA02019593
EMBL:DAAA02019594 EMBL:BC151671 IPI:IPI00904793
RefSeq:NP_001096568.1 UniGene:Bt.64682 ProteinModelPortal:A7E320
SMR:A7E320 STRING:A7E320 Ensembl:ENSBTAT00000044908 GeneID:530411
KEGG:bta:530411 CTD:29128 GeneTree:ENSGT00390000008296
HOGENOM:HOG000124662 HOVERGEN:HBG059298 OMA:HVEPGLQ
NextBio:20875252 ArrayExpress:A7E320 GO:GO:0044729
InterPro:IPR021991 Pfam:PF12148 Uniprot:A7E320
Length = 786
Score = 1562 (554.9 bits), Expect = 4.2e-184, Sum P(2) = 4.2e-184
Identities = 316/631 (50%), Positives = 410/631 (64%)
Query: 1 MYVKIRSLDGS-KNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFD 59
M++++R++DG + V LS+ T + +++ +I+ V QRLFY+GKQ+ED + LFD
Sbjct: 1 MWIQVRTMDGKVAHTVDSLSRLTKVEELRKKIQELFHVEPGLQRLFYRGKQMEDGHTLFD 60
Query: 60 YNVNLNDVIQLMIKADI--DKNYQSSESSSKEN---IQPNGPACK-PNINTENASSSGNN 113
Y+V LND IQL+++ + SS SKE + C ++ +S+SG
Sbjct: 61 YDVRLNDTIQLLVRQSLVLPVPVPSSSGGSKERDSELSDTDSGCGLAQSESDKSSNSGEA 120
Query: 114 T-EPEDFVDLKPADSQ---YYKVGDYVDAILETEGAWFESQI--------THILVDINKE 161
EPE D D YKVG+YVDA GAWFE+++ H +
Sbjct: 121 ANEPEGKADEDECDETELGLYKVGEYVDARDTNMGAWFEAKVIRVTRKAPAHDQPSSSSS 180
Query: 162 KPYDEDDLIFKVVHLKYKDDGSSTMKFDDIRPLPKHLITEFNENLIGVRVMGNYNAEEPR 221
KP EDD+I+ V + Y ++G M ++R +H I ++ + +G VM NYN + P+
Sbjct: 181 KP--EDDIIYHVTYDDYPENGVVQMTSQNVRARARHTI-KWEDLQVGQVVMVNYNPDLPK 237
Query: 222 ERGYWHDMIIEKKQGKRLTTELIATVFIGKKGLETRLENCKIKFVKELYKIESPKLLAER 281
+RG+W+D I +K+ R EL A V IG L +C+I FV E++KIE P
Sbjct: 238 DRGFWYDAEILRKRETRTARELHANVRIGGDSLN----DCRIVFVDEVFKIERP------ 287
Query: 282 TAEDEDHMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHYY 341
E + E R+ P C C D E K C+ C C +C GK PDK ++C+EC +
Sbjct: 288 ---GEGNPMVENPMRRKSGPSCKHCKDDERKLCRMCACHVCGGKQDPDKQLMCDECDMAF 344
Query: 342 HIWCLKPPLESVPEDDEWFCPSCKRDTSEVIAPGQKLKDSKKKARMASTNSKSTRDWGKG 401
HI+CL+PPL SVP ++EW+CP C+ D+SEV+ G+KLK+SKKKA+MAS S S RDWGKG
Sbjct: 345 HIYCLRPPLSSVPPEEEWYCPDCRIDSSEVVQAGEKLKESKKKAKMASATSSSQRDWGKG 404
Query: 402 MACVGRTKVCTIVPSDHFGPIPGIEVGQSYLYRFQASEAGVHRPHVSGIHGREDVGAFSL 461
MACVGRTK CTIVPS+HFGPIPGI VG + +R Q SE+GVHRPHV+GIHGR + GA+SL
Sbjct: 405 MACVGRTKECTIVPSNHFGPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNHGAYSL 464
Query: 462 VLSGGYEDDVDDGDSFLYTGSGGRDLSGNKRTSVQSFDQTLTRMNKALARNCNAPIDDKR 521
VL+GGYEDDVD G+SF YTGSGGRDLSGNKRT+ QS DQ LT N+ALA NC API+D +
Sbjct: 465 VLAGGYEDDVDHGNSFTYTGSGGRDLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDLK 524
Query: 522 GNEAVDWKKGKPVRVMRNFHGAKHSKYAPKEGNRYDGIYKVVKYYPVKGSSDFIVWRFHL 581
G EA DW+ GKPVRV+RN G KHSKYAP EGNRYDGIYKVV+Y+P KG S F+VWRF L
Sbjct: 525 GAEAKDWRSGKPVRVVRNVKGRKHSKYAPIEGNRYDGIYKVVRYWPEKGKSGFLVWRFLL 584
Query: 582 QRDDEAPAPWTEEGKKRIKDLGLQMIYPEGY 612
+RDD P PWT+EGK RIK LGL M YPEGY
Sbjct: 585 RRDDVEPGPWTKEGKDRIKKLGLTMQYPEGY 615
Score = 246 (91.7 bits), Expect = 4.2e-184, Sum P(2) = 4.2e-184
Identities = 54/125 (43%), Positives = 72/125 (57%)
Query: 641 KKSK-QVYTLPSSVLEHINNDTVHSNVWDEIKALCKEGQKEVLEHIQEKFLCIICQELVY 699
KK+K + Y+L + I D + +W EI K+G K L ++E F CI CQELV+
Sbjct: 667 KKTKVEPYSLTTQQSSLIKEDKSNMKLWTEILKSLKDGPK-FLSKVEETFQCICCQELVF 725
Query: 700 KPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKSCLETHSNDALQSILSTLFPG 759
+PIT C H C DCL R+FK + SCP CR ++ +S T N LQ++LS LFPG
Sbjct: 726 RPITTVCQHNVCKDCLDRSFKAQ---VFSCPACRYDLGRSYAMT-VNQPLQAVLSQLFPG 781
Query: 760 YSSAR 764
Y S R
Sbjct: 782 YGSGR 786
>UNIPROTKB|B6CHA3 [details] [associations]
symbol:uhrf1 "E3 ubiquitin-protein ligase UHRF1"
species:8355 "Xenopus laevis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000790 "nuclear chromatin" evidence=ISS] [GO:0000791
"euchromatin" evidence=ISS] [GO:0000792 "heterochromatin"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005657 "replication fork" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0010216
"maintenance of DNA methylation" evidence=ISS] [GO:0016574 "histone
ubiquitination" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0044729 "hemi-methylated DNA-binding" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] InterPro:IPR001841
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 UniPathway:UPA00143
Prosite:PS00299 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0000122 GO:GO:0007049 GO:GO:0000790
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787
GO:GO:0051865 GO:GO:0000792 GO:GO:0005657 GO:GO:0016574
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
KO:K10638 Gene3D:2.30.280.10 CTD:29128 HOVERGEN:HBG059298
GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148 EMBL:EU177101
RefSeq:NP_001129236.1 UniGene:Xl.23750 ProteinModelPortal:B6CHA3
GeneID:432234 KEGG:xla:432234 Xenbase:XB-GENE-5821540
Uniprot:B6CHA3
Length = 772
Score = 1770 (628.1 bits), Expect = 2.0e-182, P = 2.0e-182
Identities = 364/795 (45%), Positives = 495/795 (62%)
Query: 1 MYVKIRSLDG-SKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFD 59
M++++R++DG + LSK T + D++ +I+ V ++ QRLFY+GKQ+E+ + LFD
Sbjct: 1 MWIQVRTMDGRDTRRIDSLSKLTKVDDLRDRIQQLFGVALESQRLFYRGKQMENGHTLFD 60
Query: 60 YNVNLNDVIQLMIKADIDKNYQSSESSSKE-NIQPNGPACKPNINTENASSSGNNTEPED 118
Y+V LND++QL+++ D S + KE + C ++ S SG D
Sbjct: 61 YSVGLNDIVQLLVRQIPD----SFPTKHKECELSDASAGCGSG-QRDSDSGSGEGAMDVD 115
Query: 119 FVDL----KPADSQYYKVGDYVDAILETEGAWFESQITHILVDINK--EKPYDEDDLIFK 172
+ + + YK D VDA GAWFE+QI ++ + P D +
Sbjct: 116 GQSISIIGENVGTSLYKKNDLVDARDLNMGAWFEAQIVNVSKKVGPYGTLPEVSDTSVTS 175
Query: 173 ---VVHLKYKD---DGSSTMKFDDIRPLPKHLITEFNENLIGVRVMGNYNAEEPRERGYW 226
+ H+KY+D +G + D+R L ++E +G VM NYN +EP+ERGYW
Sbjct: 176 DAIIYHVKYEDYPENGVVQLTCKDVR-LRARTTLPWHEIKVGQVVMVNYNPDEPKERGYW 234
Query: 227 HDM-IIEKKQGKRLTTELIATVFIGKKGLETRLENCKIKFVKELYKIESPKLLAERTAED 285
+D I+ K + K++ E+ A V +G G L +C+I+FV E+YKIE P
Sbjct: 235 YDAEILRKHESKKIK-EIYAKVLLGDAG--DSLNDCRIRFVNEIYKIEEP---------G 282
Query: 286 EDHMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHYYHIWC 345
+++TE RQ PEC C D + C+ C C IC GK P+K ++C+EC +HI+C
Sbjct: 283 STYLNTESPQKRQNGPECKHCKDNPKRACRMCACCICGGKQDPEKQLLCDECDLAFHIYC 342
Query: 346 LKPPLESVPEDDEWFCPSCKRDTSEVIAPGQKLKDSKKKARMASTNSKSTRDWGKGMACV 405
LKPPL +P+D++W+CP C+ D SEV+ G+KLK+SKKKARMAS NS S RDWGKGMACV
Sbjct: 343 LKPPLSVIPQDEDWYCPDCRNDASEVVLAGEKLKESKKKARMASANSSSQRDWGKGMACV 402
Query: 406 GRTKVCTIVPSDHFGPIPGIEVGQSYLYRFQASEAGVHRPHVSGIHGREDVGAFSLVLSG 465
GR++ CTIVPS+H+GPIPG+ VG + +R Q SE+GVHRPHV+GIHGR + G++SLVL+G
Sbjct: 403 GRSRECTIVPSNHYGPIPGVPVGTLWKFRVQVSESGVHRPHVAGIHGRSNDGSYSLVLAG 462
Query: 466 GYEDDVDDGDSFLYTGSGGRDLSGNKRTSVQSFDQTLTRMNKALARNCNAPIDDKRGNEA 525
GYEDDVD+G+ F YTGSGGRDLSGNKRT+ QS DQ L+ MN+ALA NC+API+DK G+ A
Sbjct: 463 GYEDDVDNGNEFTYTGSGGRDLSGNKRTAEQSCDQKLSNMNRALALNCSAPINDKEGSIA 522
Query: 526 VDWKKGKPVRVMRNFHGAKHSKYAPKEGNRYDGIYKVVKYYPVKGSSDFIVWRFHLQRDD 585
DW+ GKPVRV+RN G KHSKYAP+EGNRYDGIYKVVKY+P KG S F+VWR+ L+RDD
Sbjct: 523 KDWRAGKPVRVVRNSKGRKHSKYAPEEGNRYDGIYKVVKYWPEKGKSGFLVWRYLLRRDD 582
Query: 586 EAPAPWTEEGKKRIKDLGLQMIYPEGYXXXXXXXXXXXXNL------------KRKVSSE 633
PAPW++EGK+RIK LGL M YP+GY N KRK +S+
Sbjct: 583 YEPAPWSKEGKERIKKLGLTMQYPDGYLETLASKEREKENKTEDEPIDSPSKGKRKRNSD 642
Query: 634 ---TLGESKVKKSKQV-YTLPSSVLEHINNDTVHSNVWDEIKALCKEGQKEVLEHIQEKF 689
T +S KK K Y L I D +++ +W E+ KEG K V ++E F
Sbjct: 643 NEQTAAKSIPKKMKVASYKLTLEQKTLIKQDVLNAKLWSEVMLFLKEGPKFV-NKVEETF 701
Query: 690 LCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKSCLETHSNDAL 749
LCI CQE+VY+P+T +C H C CL R+FK +SCP CR ++ K+ + N L
Sbjct: 702 LCICCQEVVYEPVTTECHHNICKGCLDRSFKA---LVHSCPACRHDLGKN-YPLNVNKPL 757
Query: 750 QSILSTLFPGYSSAR 764
Q+ILS LFPGY S R
Sbjct: 758 QAILSQLFPGYESGR 772
>UNIPROTKB|F1S7K1 [details] [associations]
symbol:UHRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IEA]
[GO:0031493 "nucleosomal histone binding" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0010390 "histone
monoubiquitination" evidence=IEA] [GO:0010216 "maintenance of DNA
methylation" evidence=IEA] [GO:0005657 "replication fork"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000626 InterPro:IPR001965
InterPro:IPR003105 InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628
Pfam:PF02182 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015
SMART:SM00184 SMART:SM00213 SMART:SM00249 SMART:SM00466
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR017907 GO:GO:0000792 Gene3D:2.30.30.30
InterPro:IPR014722 Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296
OMA:HVEPGLQ InterPro:IPR021991 Pfam:PF12148 EMBL:CU681848
Ensembl:ENSSSCT00000014764 Uniprot:F1S7K1
Length = 813
Score = 1547 (549.6 bits), Expect = 7.1e-180, Sum P(2) = 7.1e-180
Identities = 308/627 (49%), Positives = 409/627 (65%)
Query: 1 MYVKIRSLDGS-KNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFD 59
M++++R++DG + V LS+ T + +++ +I+ V QRLFY+GKQ+ED + LFD
Sbjct: 15 MWIQVRTMDGKVAHTVNSLSRLTKVENLRRRIQEVFHVEPGLQRLFYRGKQMEDGHTLFD 74
Query: 60 YNVNLNDVIQLMIKADIDKNYQSSESSSKENIQPNGPACKPNINTENASSSGNNT-EPED 118
Y+V LND IQL+++ + SS+ E + C ++ +S+SG EPE
Sbjct: 75 YDVRLNDTIQLLVRQSPMLSPGSSKERDSELSDTDSGCCLGQSESDKSSNSGEAANEPEV 134
Query: 119 FVDLKPADSQ---YYKVGDYVDAILETEGAWFESQITHILVD-INKEKPYD--------- 165
D D YK G+YVDA GAWFE+Q+ + + +++P
Sbjct: 135 KADEDTWDETELGLYKAGEYVDARDTNMGAWFEAQVIRVTKKTVAQDRPCSSSSSSSSTL 194
Query: 166 EDDLIFKVVHLKYKDDGSSTMKFDDIRPLPKHLITEFNENLIGVRVMGNYNAEEPRERGY 225
EDD+I+ V + Y ++G + D+R + ++ +++E +G VM NYN + P++RG+
Sbjct: 195 EDDVIYHVKYEDYPENGVVQLSSRDVRARARQIL-KWHELEVGQVVMLNYNTDSPKDRGF 253
Query: 226 WHDMIIEKKQGKRLTTELIATVFIGKKGLETRLENCKIKFVKELYKIESPKLLAERTAED 285
W+D I +K+ R EL A V IG + L +C+I FV E++KIE P
Sbjct: 254 WYDAEILRKRETRTARELHANVRIG----DDSLNDCRIIFVDEVFKIERP---------G 300
Query: 286 EDHMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHYYHIWC 345
E E R+ P C C D K C+ C C +C GK PDK ++C+EC +H++C
Sbjct: 301 EGSPLVETPVRRKSGPTCKHCKDNPRKLCRMCACRLCGGKQDPDKQLMCDECDMAFHMYC 360
Query: 346 LKPPLESVPEDDEWFCPSCKRDTSEVIAPGQKLKDSKKKARMASTNSKSTRDWGKGMACV 405
L PPL SVP + EW+CP C+ D+SEV+ G+KLK+SKKKA+MAS S S RDWGKGMACV
Sbjct: 361 LCPPLSSVPSEAEWYCPECRIDSSEVVQAGEKLKESKKKAKMASATSSSQRDWGKGMACV 420
Query: 406 GRTKVCTIVPSDHFGPIPGIEVGQSYLYRFQASEAGVHRPHVSGIHGREDVGAFSLVLSG 465
GRTK CTIVPS+H+GPIPGI VG + +R Q SE+GVHRPHV+GIHGR + GA+SLVL+G
Sbjct: 421 GRTKECTIVPSNHYGPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAG 480
Query: 466 GYEDDVDDGDSFLYTGSGGRDLSGNKRTSVQSFDQTLTRMNKALARNCNAPIDDKRGNEA 525
GYEDDVD G+SF YTGSGGRDLSGNKRT+ QS DQ LT N+ALA NC API+D++G EA
Sbjct: 481 GYEDDVDHGNSFTYTGSGGRDLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDRKGAEA 540
Query: 526 VDWKKGKPVRVMRNFHGAKHSKYAPKEGNRYDGIYKVVKYYPVKGSSDFIVWRFHLQRDD 585
DW+ GKPVRV+RN G KHSKYAP EGNRYDGIYKVV+Y+P KG S F+VWRF L+RDD
Sbjct: 541 KDWRSGKPVRVVRNVKGRKHSKYAPVEGNRYDGIYKVVRYWPEKGKSGFLVWRFLLRRDD 600
Query: 586 EAPAPWTEEGKKRIKDLGLQMIYPEGY 612
P PWT+EGK RIK LGL M YPEGY
Sbjct: 601 VEPGPWTKEGKDRIKKLGLTMQYPEGY 627
Score = 221 (82.9 bits), Expect = 7.1e-180, Sum P(2) = 7.1e-180
Identities = 51/132 (38%), Positives = 73/132 (55%)
Query: 641 KKSK-QVYTLPSSVLEHINNDTVHSNVWDEIKALCKEGQK------EVLEHIQEKFLCII 693
KK+K + Y+L + I D ++ +W EI K+G + L ++E F CI
Sbjct: 687 KKTKVEPYSLTAQQSSLIKEDKSNTKLWTEILKSLKDGPVSSPPGLKFLSKVEETFQCIC 746
Query: 694 CQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNK-SCLETHSNDALQSI 752
CQELV++PIT C H C DCL R+FK + SCP CR + + S ++ N LQ++
Sbjct: 747 CQELVFRPITTVCQHNVCKDCLDRSFKAQ---VFSCPACRYNLGRHSTMQV--NQPLQAV 801
Query: 753 LSTLFPGYSSAR 764
LS LFPGY + R
Sbjct: 802 LSQLFPGYGNGR 813
>UNIPROTKB|Q96T88 [details] [associations]
symbol:UHRF1 "E3 ubiquitin-protein ligase UHRF1"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IDA] [GO:0008327 "methyl-CpG
binding" evidence=IDA] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS;IDA] [GO:0000792 "heterochromatin" evidence=IDA]
[GO:0016574 "histone ubiquitination" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0000791 "euchromatin" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IDA] [GO:0010216 "maintenance of DNA methylation"
evidence=IMP] [GO:0005657 "replication fork" evidence=IDA]
[GO:0000790 "nuclear chromatin" evidence=ISS;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0044729 "hemi-methylated DNA-binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0000987 "core
promoter proximal region sequence-specific DNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:2000373
"positive regulation of DNA topoisomerase (ATP-hydrolyzing)
activity" evidence=IC] [GO:0032270 "positive regulation of cellular
protein metabolic process" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IC] [GO:0031493 "nucleosomal histone binding"
evidence=ISS] [GO:0010390 "histone monoubiquitination"
evidence=ISS] [GO:0042802 "identical protein binding" evidence=ISS]
[GO:0016363 "nuclear matrix" evidence=ISS] [GO:0008283 "cell
proliferation" evidence=IEP] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0046872 GO:GO:0008283 GO:GO:0008270
GO:GO:0006281 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0000122 GO:GO:0007049 GO:GO:0000790 GO:GO:0042802
EMBL:CH471139 GO:GO:0000987 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0032270
GO:GO:0004842 GO:GO:0016363 GO:GO:0035064 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787 GO:GO:0051865
GO:GO:0000792 GO:GO:0005657 GO:GO:0010390 GO:GO:0031493
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
GO:GO:0008327 PDB:3T6R PDBsum:3T6R PDB:3DB3 PDBsum:3DB3 PDB:3ASK
PDB:3ASL PDB:4GY5 PDBsum:3ASK PDBsum:3ASL PDBsum:4GY5
eggNOG:COG3440 KO:K10638 Gene3D:2.30.280.10 EMBL:AC027319
GO:GO:2000373 CTD:29128 HOGENOM:HOG000124662 HOVERGEN:HBG059298
GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148 EMBL:AF129507
EMBL:AB177623 EMBL:AB177624 EMBL:AB075601 EMBL:AF274048
EMBL:EF560733 EMBL:AK025578 EMBL:AK289389 EMBL:AK314579
EMBL:AY787925 EMBL:AC053467 EMBL:BC113875 IPI:IPI00797945
RefSeq:NP_001041666.1 RefSeq:NP_037414.3 UniGene:Hs.108106 PDB:2FAZ
PDB:2L3R PDB:2LGG PDB:2LGK PDB:2LGL PDB:2PB7 PDB:3BI7 PDB:3CLZ
PDB:3DB4 PDB:3DWH PDB:3FL2 PDB:3SHB PDB:3SOU PDB:3SOW PDB:3SOX
PDB:3ZVY PDB:3ZVZ PDBsum:2FAZ PDBsum:2L3R PDBsum:2LGG PDBsum:2LGK
PDBsum:2LGL PDBsum:2PB7 PDBsum:3BI7 PDBsum:3CLZ PDBsum:3DB4
PDBsum:3DWH PDBsum:3FL2 PDBsum:3SHB PDBsum:3SOU PDBsum:3SOW
PDBsum:3SOX PDBsum:3ZVY PDBsum:3ZVZ ProteinModelPortal:Q96T88
SMR:Q96T88 IntAct:Q96T88 MINT:MINT-2815626 STRING:Q96T88
PhosphoSite:Q96T88 DMDM:67462077 PaxDb:Q96T88 PRIDE:Q96T88
DNASU:29128 Ensembl:ENST00000262952 Ensembl:ENST00000398240
Ensembl:ENST00000455180 GeneID:29128 KEGG:hsa:29128 UCSC:uc002mbo.3
GeneCards:GC19P004910 HGNC:HGNC:12556 HPA:HPA049408 MIM:607990
neXtProt:NX_Q96T88 PharmGKB:PA37196 InParanoid:Q96T88
OrthoDB:EOG408N7M EvolutionaryTrace:Q96T88 GenomeRNAi:29128
NextBio:52244 ArrayExpress:Q96T88 CleanEx:HS_UHRF1
Genevestigator:Q96T88 GermOnline:ENSG00000034063 Uniprot:Q96T88
Length = 793
Score = 1540 (547.2 bits), Expect = 6.3e-179, Sum P(2) = 6.3e-179
Identities = 307/653 (47%), Positives = 417/653 (63%)
Query: 1 MYVKIRSLDGSK-NCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFD 59
M++++R++DG + + V LS+ T + +++ +I+ V QRLFY+GKQ+ED + LFD
Sbjct: 1 MWIQVRTMDGRQTHTVDSLSRLTKVEELRRKIQELFHVEPGLQRLFYRGKQMEDGHTLFD 60
Query: 60 YNVNLNDVIQLMIKADIDKNYQSSESSSKENIQPNGPACKPNINTENASSSGNNTEPEDF 119
Y V LND IQL+++ + + + E S+ + +G C ++ +S+ G E
Sbjct: 61 YEVRLNDTIQLLVRQSLVLPHSTKERDSELSDTDSG-CCLGQSESDKSSTHG---EAAAE 116
Query: 120 VDLKPADSQY--------YKVGDYVDAILETEGAWFESQITHILVDI-NKEKPYD----- 165
D +PAD YKV +YVDA GAWFE+Q+ + ++++P
Sbjct: 117 TDSRPADEDMWDETELGLYKVNEYVDARDTNMGAWFEAQVVRVTRKAPSRDEPCSSTSRP 176
Query: 166 --EDDLIFKVVHLKYKDDGSSTMKFDDIRPLPKHLITEFNENLIGVRVMGNYNAEEPRER 223
E+D+I+ V + Y ++G M D+R + +I ++ + +G VM NYN + P+ER
Sbjct: 177 ALEEDVIYHVKYDDYPENGVVQMNSRDVRARARTII-KWQDLEVGQVVMLNYNPDNPKER 235
Query: 224 GYWHDMIIEKKQGKRLTTELIATVFIGKKGLETRLENCKIKFVKELYKIESPKLLAERTA 283
G+W+D I +K+ R EL A V +G + L +C+I FV E++KIE P
Sbjct: 236 GFWYDAEISRKRETRTARELYANVVLG----DDSLNDCRIIFVDEVFKIERPG------- 284
Query: 284 EDEDHMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHYYHI 343
+ M P R+ P C C D + C+ C C +C G+ PDK ++C+EC +HI
Sbjct: 285 -EGSPMVDNPMR-RKSGPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHI 342
Query: 344 WCLKPPLESVPEDDEWFCPSCKRDTSEVIAPGQKLKDSKKKARMASTNSKSTRDWGKGMA 403
+CL PPL SVP +DEW+CP C+ D SEV+ G++L++SKKKA+MAS S S RDWGKGMA
Sbjct: 343 YCLDPPLSSVPSEDEWYCPECRNDASEVVLAGERLRESKKKAKMASATSSSQRDWGKGMA 402
Query: 404 CVGRTKVCTIVPSDHFGPIPGIEVGQSYLYRFQASEAGVHRPHVSGIHGREDVGAFSLVL 463
CVGRTK CTIVPS+H+GPIPGI VG + +R Q SE+GVHRPHV+GIHGR + GA+SLVL
Sbjct: 403 CVGRTKECTIVPSNHYGPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVL 462
Query: 464 SGGYEDDVDDGDSFLYTGSGGRDLSGNKRTSVQSFDQTLTRMNKALARNCNAPIDDKRGN 523
+GGYEDDVD G+ F YTGSGGRDLSGNKRT+ QS DQ LT N+ALA NC API+D+ G
Sbjct: 463 AGGYEDDVDHGNFFTYTGSGGRDLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGA 522
Query: 524 EAVDWKKGKPVRVMRNFHGAKHSKYAPKEGNRYDGIYKVVKYYPVKGSSDFIVWRFHLQR 583
EA DW+ GKPVRV+RN G K+SKYAP EGNRYDGIYKVVKY+P KG S F+VWR+ L+R
Sbjct: 523 EAKDWRSGKPVRVVRNVKGGKNSKYAPAEGNRYDGIYKVVKYWPEKGKSGFLVWRYLLRR 582
Query: 584 DDEAPAPWTEEGKKRIKDLGLQMIYPEGYXXXXXXXXXXXXNLKRKVSSETLG 636
DD+ P PWT+EGK RIK LGL M YPEGY N KR+ + G
Sbjct: 583 DDDEPGPWTKEGKDRIKKLGLTMQYPEGYLEALANREREKENSKREEEEQQEG 635
Score = 219 (82.2 bits), Expect = 6.3e-179, Sum P(2) = 6.3e-179
Identities = 49/131 (37%), Positives = 74/131 (56%)
Query: 641 KKSK-QVYTLPSSVLEHINNDTVHSNVWDEIKALCKE----GQ--KEVLEHIQEKFLCII 693
KK+K + Y+L + I D ++ +W+E+ A K+ G + L ++E F CI
Sbjct: 667 KKTKVEPYSLTAQQSSLIREDKSNAKLWNEVLASLKDRPASGSPFQLFLSKVEETFQCIC 726
Query: 694 CQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKSCLETHSNDALQSIL 753
CQELV++PIT C H C DCL R+F+ + SCP CR ++ +S N LQ++L
Sbjct: 727 CQELVFRPITTVCQHNVCKDCLDRSFRAQ---VFSCPACRYDLGRS-YAMQVNQPLQTVL 782
Query: 754 STLFPGYSSAR 764
+ LFPGY + R
Sbjct: 783 NQLFPGYGNGR 793
>UNIPROTKB|F6UA42 [details] [associations]
symbol:uhrf1 "E3 ubiquitin-protein ligase UHRF1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0000791 "euchromatin" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005657 "replication fork"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0016574 "histone ubiquitination" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISS] [GO:0051865 "protein autoubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0000122 GO:GO:0007049 GO:GO:0000790 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787 GO:GO:0051865
GO:GO:0000792 GO:GO:0005657 GO:GO:0016574 GO:GO:0010216
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791 KO:K10638
Gene3D:2.30.280.10 CTD:29128 GO:GO:0044729 InterPro:IPR021991
Pfam:PF12148 EMBL:AAMC01100082 EMBL:AAMC01100083 EMBL:AAMC01100084
EMBL:AAMC01100085 EMBL:AAMC01100086 EMBL:AAMC01100087
RefSeq:XP_002940183.1 GeneID:100491405 KEGG:xtr:100491405
Xenbase:XB-GENE-5821474 Bgee:F6UA42 Uniprot:F6UA42
Length = 775
Score = 1725 (612.3 bits), Expect = 1.2e-177, P = 1.2e-177
Identities = 361/800 (45%), Positives = 496/800 (62%)
Query: 1 MYVKIRSLDG-SKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFD 59
M++++R++DG + LSK T + D++ +I+ V ++ QRLFY+GKQ+E+ + LFD
Sbjct: 1 MWIQVRTMDGRDTRRIDSLSKLTKVEDLRARIQQIFGVALESQRLFYRGKQMENGHTLFD 60
Query: 60 YNVNLNDVIQLMIKADIDKNYQSSESSSKE-NIQPNGPACKPNINTENASSSGNNTEPED 118
Y+V LND++QL+++ D S + KE I C + +SS +
Sbjct: 61 YSVGLNDIVQLLVRQIPD----SVPTKDKECGISDADSGCGSGQGESDKNSSCGEGATD- 115
Query: 119 FVDLKPA--DSQ-----YYKVGDYVDAILETEGAWFESQITHILVDINKEKPYDE----- 166
VD +PA +S+ YK D VDA GAWFE+QI + +N + E
Sbjct: 116 -VDGQPAGINSENVGPSLYKKNDLVDARDLNMGAWFEAQIVSVSKRVNPDGMSAEILDTS 174
Query: 167 ---DDLIFKVVHLKYKDDGSSTMKFDDIRPLPKHLITEFNENLIGVRVMGNYNAEEPRER 223
DD+I+ V + Y ++G + + D+R L +++ +G VM NYN +EP+ER
Sbjct: 175 AASDDIIYHVKYEDYPENGVVQLTYKDVR-LRARTTLPWHDLKVGQVVMVNYNPDEPKER 233
Query: 224 GYWHDMIIEKKQGKRLTTELIATVFIGKKGLETRLENCKIKFVKELYKIESPKLLAERTA 283
GYW+D I +K+ R E+ V +G G L +C+I+FV E+YKIE P
Sbjct: 234 GYWYDAEILRKRETRTIKEIYVKVLLGDAG--DSLNDCRIRFVDEIYKIEEP-------- 283
Query: 284 EDEDHMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHYYHI 343
+++TE RQ PEC C D + C+ C C +C GK P+K ++C+EC +HI
Sbjct: 284 -GSAYITTESPQKRQNGPECKHCKDNPKRACRMCACYVCGGKQDPEKQLLCDECDMAFHI 342
Query: 344 WCLKPPLESVPEDDEWFCPSCKRDTSEVIAPGQKLKDSKKKARMASTNSKSTRDWGKGMA 403
+CLKPPL ++P+D++W+CP C+ D SEV+ G+KLK+SKKKA+MAS +S S RDWGKGMA
Sbjct: 343 YCLKPPLSAIPQDEDWYCPDCRNDASEVVLAGEKLKESKKKAKMASASSSSQRDWGKGMA 402
Query: 404 CVGRTKVCTIVPSDHFGPIPGIEVGQSYLYRFQASEAGVHRPHVSGIHGREDVGAFSLVL 463
CVGR++ CTIVPS+H+GPIPG+ VG + +R Q SE+GVHRPHV+GIHGR + G++SLVL
Sbjct: 403 CVGRSRECTIVPSNHYGPIPGVPVGTLWKFRVQVSESGVHRPHVAGIHGRSNDGSYSLVL 462
Query: 464 SGGYEDDVDDGDSFLYTGSGGRDLSGNKRTSVQSFDQTLTRMNKALARNCNAPIDDKRGN 523
+GGYEDDVD+G F YTGSGGRDLSGNKRT+ QS DQ LT MN+ALA NC+API+DK G
Sbjct: 463 AGGYEDDVDNGSEFTYTGSGGRDLSGNKRTAEQSCDQKLTNMNRALALNCSAPINDKEGA 522
Query: 524 EAVDWKKGKPVRVMRNFHGAKHSKYAPKEGNRYDGIYKVVKYYPVKGSSDFIVWRFHLQR 583
A DW+ GKPVRV+RN G KHSKYAP++GNRYDGIYKVVKY+P KG S F+VWR+ L+R
Sbjct: 523 VAKDWRAGKPVRVVRNTKGKKHSKYAPEDGNRYDGIYKVVKYWPEKGKSGFLVWRYLLRR 582
Query: 584 DDEAPAPWTEEGKKRIKDLGLQMIYPEGYXXXXXXXXXXXXNL------------KRKVS 631
DDE PAPW++EGK+RIK LGL M YP+GY N KRK +
Sbjct: 583 DDEEPAPWSKEGKERIKKLGLVMQYPDGYLESLASKEREKENKTEDELSESPSKGKRKRN 642
Query: 632 SETLGESKVKKSKQVYTLPSSVLEHINNDTVHSNVWDEIKA-LCKEGQ---KE---VLEH 684
S G S K + + + S L ++ T+ D++ A L +E KE L
Sbjct: 643 SAGSGLSDAKSTPKKTKVESYKLS-LDQKTLIKQ--DDLNAKLWREVMSFLKEGPKFLSK 699
Query: 685 IQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKSCLETH 744
++E FLCI CQE+VY+PIT +C H C CL R+FK ++CP CR ++ K+ +
Sbjct: 700 VEETFLCICCQEVVYEPITTECHHNICKGCLDRSFKA---LVHNCPACRHDLGKN-YSLN 755
Query: 745 SNDALQSILSTLFPGYSSAR 764
N LQ+ILS LFPGY R
Sbjct: 756 VNKPLQAILSQLFPGYERGR 775
>RGD|1309990 [details] [associations]
symbol:Uhrf2 "ubiquitin-like with PHD and ring finger domains 2,
E3 ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005720 "nuclear
heterochromatin" evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA;ISO]
[GO:0042393 "histone binding" evidence=IEA;ISO] [GO:0051865
"protein autoubiquitination" evidence=IEA;ISO] [GO:0071158
"positive regulation of cell cycle arrest" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001841
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 RGD:1309990
Prosite:PS00518 GO:GO:0030154 GO:GO:0071158 GO:GO:0046872
GO:GO:0008283 GO:GO:0008270 GO:GO:0005720 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511
GO:GO:0004842 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907
GO:GO:0051865 Gene3D:2.30.30.30 InterPro:IPR014722 EMBL:CH473953
Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296 InterPro:IPR021991
Pfam:PF12148 OrthoDB:EOG408N7M CTD:115426 KO:K15713 IPI:IPI00213897
RefSeq:NP_001101055.1 UniGene:Rn.2173 Ensembl:ENSRNOT00000015406
GeneID:309331 KEGG:rno:309331 UCSC:RGD:1309990 NextBio:660596
Uniprot:D3ZK36
Length = 803
Score = 1464 (520.4 bits), Expect = 3.7e-172, Sum P(2) = 3.7e-172
Identities = 289/622 (46%), Positives = 395/622 (63%)
Query: 159 NKEKPYDEDDLIFKVVHLKYKDDGSSTMKFDDIRPLPKHLITEFNENLIGVRVMGNYNAE 218
N + ++D+I+ + + +Y + G+ M ++RP + ++ ++NE +G VM NYN E
Sbjct: 198 NSDSVAADEDVIYHIEYDEYPESGTLEMNAKELRPRARTIL-KWNELNVGDVVMVNYNVE 256
Query: 219 EPRERGYWHDM-IIEKKQGKRLTTELIATVFIGKKGLETRLENCKIKFVKELYKIESPKL 277
P +RG+W+D I K R E+ VF+G G E L +C++ FV E++KIE P
Sbjct: 257 NPGKRGFWYDAEITTLKTISRTKKEVRVKVFLG--GSEGTLNDCRVMFVDEIFKIEKPGA 314
Query: 278 LAERTAEDEDHMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEEC 337
A+ K LR+ PEC C K C C C C K P+ ++C+EC
Sbjct: 315 HPLSFADG--------KFLRKNDPECDLCGGDPDKTCHMCSCHKCGEKRDPNMQLLCDEC 366
Query: 338 QHYYHIWCLKPPLESVPEDDEWFCPSCKRDTSEVIAPGQKLKDSKKKARMASTNSKSTRD 397
YHI+CL PPL+ VPE++ W+CPSCK D+SEV+ G+KLK SKKKA+M S +++S RD
Sbjct: 367 NMAYHIYCLSPPLDKVPEEEYWYCPSCKTDSSEVVKAGEKLKLSKKKAKMPSASTESRRD 426
Query: 398 WGKGMACVGRTKVCTIVPSDHFGPIPGIEVGQSYLYRFQASEAGVHRPHVSGIHGREDVG 457
WG+GMACVGRTK CTIVPS+H+GPIPGI VG ++ +R Q SEAGVHRPHV GIHGR + G
Sbjct: 427 WGRGMACVGRTKECTIVPSNHYGPIPGIPVGSTWRFRVQVSEAGVHRPHVGGIHGRSNDG 486
Query: 458 AFSLVLSGGYEDDVDDGDSFLYTGSGGRDLSGNKRTSVQSFDQTLTRMNKALARNCNAPI 517
A+SLVL+GG+ED+VD GD F YTGSGG++L+GNKR S DQTLT MN+ALA NC+AP+
Sbjct: 487 AYSLVLAGGFEDEVDRGDEFTYTGSGGKNLAGNKRIGAPSADQTLTNMNRALALNCDAPL 546
Query: 518 DDKRGNEAVDWKKGKPVRVMRNFHGAKHSKYAPKEGNRYDGIYKVVKYYP-VKGSSDFIV 576
DDK G E+ +W+ GKPVRV+R+F G K SKYAP+EGNRYDGIYKVVKY+P + S F+V
Sbjct: 547 DDKIGAESRNWRAGKPVRVIRSFKGRKISKYAPEEGNRYDGIYKVVKYWPEISSSHGFLV 606
Query: 577 WRFHLQRDDEAPAPWTEEGKKRIKDLGLQMIYPEGY-------XXXXXXXXXXXXNLKRK 629
WR+ L+RDD PAPWT EG +R + L L++ YP GY KR
Sbjct: 607 WRYLLRRDDVEPAPWTSEGIERSRRLCLRLQYPAGYPSDKEGKKTKGQSKKQTSEGTKRP 666
Query: 630 VSS-ETLGESKVKKSK------QVYTLPSSVLEHINNDTVHSNVWDEIKALCKEGQKEVL 682
S E +SKV+K+ + + L I D + +WDE+ A EG L
Sbjct: 667 ASDDECPSDSKVQKTSDSTEAVEAFQLTPQQQRLIKEDCQNQKLWDEVLASLVEGPN-FL 725
Query: 683 EHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKSCLE 742
+ +++ F+C+ CQELVY+P+T +C H C DCL+R+FK + SCP CR ++ ++ +
Sbjct: 726 KKLEQSFMCVCCQELVYQPVTTECFHNVCKDCLQRSFKAQ---VFSCPACRHDLGQNYIM 782
Query: 743 THSNDALQSILSTLFPGYSSAR 764
T N+ LQ++L FPGYS R
Sbjct: 783 T-LNETLQTVLDLFFPGYSKGR 803
Score = 231 (86.4 bits), Expect = 3.7e-172, Sum P(2) = 3.7e-172
Identities = 53/154 (34%), Positives = 89/154 (57%)
Query: 1 MYVKIRSLDGSKNCVLV-LSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFD 59
M++++R++DGS+ + +S++ I +++ ++ DV + QRLFY+GKQLE+ Y LFD
Sbjct: 1 MWIQVRTIDGSQTRTIEDVSRKATIEELRERVWALFDVRPECQRLFYRGKQLENGYTLFD 60
Query: 60 YNVNLNDVIQLMIKADIDKNYQSSESSSKENIQPNGPACKPNINTENASSSGNNTEPEDF 119
Y+V LND+IQL+++ D S S+SK+N P+ + + G++++P
Sbjct: 61 YDVGLNDIIQLLVRPD-----SSLPSTSKQNDVQVKPSSNNTPKVKKTARGGSSSQPSTS 115
Query: 120 VDLKPADSQY--YKVGDYVDAILETEGAWFESQI 151
D + YKV + VDA GAWFE+ I
Sbjct: 116 ARTCLIDPGFGLYKVNELVDARDAGLGAWFEAHI 149
>UNIPROTKB|Q96PU4 [details] [associations]
symbol:UHRF2 "E3 ubiquitin-protein ligase UHRF2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0005720 "nuclear heterochromatin"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0071158 "positive regulation of cell cycle arrest"
evidence=IDA] [GO:0042393 "histone binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=IEP] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0030154 "cell differentiation"
evidence=IEP] [GO:0051726 "regulation of cell cycle" evidence=TAS]
[GO:0051865 "protein autoubiquitination" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0030154 GO:GO:0071158 GO:GO:0046872
GO:GO:0003677 GO:GO:0008283 GO:GO:0008270 GO:GO:0005720
GO:GO:0007049 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 PROSITE:PS01359
GO:GO:0004842 GO:GO:0042393 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 EMBL:AL353718 eggNOG:COG3440 Gene3D:2.30.280.10
HOGENOM:HOG000124662 HOVERGEN:HBG059298 InterPro:IPR021991
Pfam:PF12148 OrthoDB:EOG408N7M EMBL:AB071698 EMBL:AF274049
EMBL:AL133480 EMBL:BC028397 EMBL:AL137728 IPI:IPI00044681
IPI:IPI00395464 RefSeq:NP_690856.1 UniGene:Hs.493401 PDB:1WY8
PDB:1Z6U PDB:2E6S PDB:3OLN PDBsum:1WY8 PDBsum:1Z6U PDBsum:2E6S
PDBsum:3OLN ProteinModelPortal:Q96PU4 SMR:Q96PU4 IntAct:Q96PU4
MINT:MINT-1196856 STRING:Q96PU4 PhosphoSite:Q96PU4 DMDM:67462076
PaxDb:Q96PU4 PeptideAtlas:Q96PU4 PRIDE:Q96PU4 DNASU:115426
Ensembl:ENST00000276893 Ensembl:ENST00000450508
Ensembl:ENST00000468435 GeneID:115426 KEGG:hsa:115426
UCSC:uc003zjy.3 CTD:115426 GeneCards:GC09P006405 HGNC:HGNC:12557
HPA:HPA026633 HPA:HPA026697 neXtProt:NX_Q96PU4 PharmGKB:PA37197
InParanoid:Q96PU4 KO:K15713 OMA:VNHNSKE ChiTaRS:UHRF2
EvolutionaryTrace:Q96PU4 GenomeRNAi:115426 NextBio:79598
ArrayExpress:Q96PU4 Bgee:Q96PU4 CleanEx:HS_UHRF2
Genevestigator:Q96PU4 GermOnline:ENSG00000147854 Uniprot:Q96PU4
Length = 802
Score = 1447 (514.4 bits), Expect = 8.8e-171, Sum P(2) = 8.8e-171
Identities = 285/615 (46%), Positives = 390/615 (63%)
Query: 166 EDDLIFKVVHLKYKDDGSSTMKFDDIRPLPKHLITEFNENLIGVRVMGNYNAEEPRERGY 225
++D+I+ + + +Y + G+ M D+RP + ++ ++NE +G VM NYN E P +RG+
Sbjct: 204 DEDVIYHIQYDEYPESGTLEMNVKDLRPRARTIL-KWNELNVGDVVMVNYNVESPGQRGF 262
Query: 226 WHDM-IIEKKQGKRLTTELIATVFIGKKGLETRLENCKIKFVKELYKIESPKLLAERTAE 284
W D I K R EL +F+G G E L +CKI V E++KIE P A+
Sbjct: 263 WFDAEITTLKTISRTKKELRVKIFLG--GSEGTLNDCKIISVDEIFKIERPGAHPLSFAD 320
Query: 285 DEDHMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHYYHIW 344
K LR+ PEC C K C C C +C GK P+ ++C+EC YHI+
Sbjct: 321 G--------KFLRRNDPECDLCGGDPEKKCHSCSCRVCGGKHEPNMQLLCDECNVAYHIY 372
Query: 345 CLKPPLESVPEDDEWFCPSCKRDTSEVIAPGQKLKDSKKKARMASTNSKSTRDWGKGMAC 404
CL PPL+ VPE++ W+CPSCK D+SEV+ G++LK SKKKA+M S +++S RDWG+GMAC
Sbjct: 373 CLNPPLDKVPEEEYWYCPSCKTDSSEVVKAGERLKMSKKKAKMPSASTESRRDWGRGMAC 432
Query: 405 VGRTKVCTIVPSDHFGPIPGIEVGQSYLYRFQASEAGVHRPHVSGIHGREDVGAFSLVLS 464
VGRT+ CTIVPS+H+GPIPGI VG ++ +R Q SEAGVHRPHV GIHGR + GA+SLVL+
Sbjct: 433 VGRTRECTIVPSNHYGPIPGIPVGSTWRFRVQVSEAGVHRPHVGGIHGRSNDGAYSLVLA 492
Query: 465 GGYEDDVDDGDSFLYTGSGGRDLSGNKRTSVQSFDQTLTRMNKALARNCNAPIDDKRGNE 524
GG+ D+VD GD F YTGSGG++L+GNKR S DQTLT MN+ALA NC+AP+DDK G E
Sbjct: 493 GGFADEVDRGDEFTYTGSGGKNLAGNKRIGAPSADQTLTNMNRALALNCDAPLDDKIGAE 552
Query: 525 AVDWKKGKPVRVMRNFHGAKHSKYAPKEGNRYDGIYKVVKYYP-VKGSSDFIVWRFHLQR 583
+ +W+ GKPVRV+R+F G K SKYAP+EGNRYDGIYKVVKY+P + S F+VWR+ L+R
Sbjct: 553 SRNWRAGKPVRVIRSFKGRKISKYAPEEGNRYDGIYKVVKYWPEISSSHGFLVWRYLLRR 612
Query: 584 DDEAPAPWTEEGKKRIKDLGLQMIYPEGYXXXXX-------XXXXXXXNLKRKVSSETL- 635
DD PAPWT EG +R + L L++ YP GY KR +S +
Sbjct: 613 DDVEPAPWTSEGIERSRRLCLRLQYPAGYPSDKEGKKPKGQSKKQPSGTTKRPISDDDCP 672
Query: 636 GESKVKKSK------QVYTLPSSVLEHINNDTVHSNVWDEIKALCKEGQKEVLEHIQEKF 689
SKV K+ + + L I D + +WDE+ + EG L+ +++ F
Sbjct: 673 SASKVYKASDSAEAIEAFQLTPQQQHLIREDCQNQKLWDEVLSHLVEGPN-FLKKLEQSF 731
Query: 690 LCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKSCLETHSNDAL 749
+C+ CQELVY+P+T +C H C DCL+R+FK + SCP CR ++ ++ + N+ L
Sbjct: 732 MCVCCQELVYQPVTTECFHNVCKDCLQRSFKAQ---VFSCPACRHDLGQNYIMI-PNEIL 787
Query: 750 QSILSTLFPGYSSAR 764
Q++L FPGYS R
Sbjct: 788 QTLLDLFFPGYSKGR 802
Score = 235 (87.8 bits), Expect = 8.8e-171, Sum P(2) = 8.8e-171
Identities = 54/154 (35%), Positives = 89/154 (57%)
Query: 1 MYVKIRSLDGSKNCVLV-LSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFD 59
M++++R++DGSK C + +S++ I +++ ++ DV + QRLFY+GKQLE+ Y LFD
Sbjct: 1 MWIQVRTIDGSKTCTIEDVSRKATIEELRERVWALFDVRPECQRLFYRGKQLENGYTLFD 60
Query: 60 YNVNLNDVIQLMIKADIDKNYQSSESSSKENIQPNGPACKPNINTENASSSGNNTEPEDF 119
Y+V LND+IQL+++ D D + + + + N P P + + A G + +P
Sbjct: 61 YDVGLNDIIQLLVRPDPD-HLPGTSTQIEAKPCSNSP---PKV--KKAPRVGPSNQPSTS 114
Query: 120 VDLKPADSQY--YKVGDYVDAILETEGAWFESQI 151
+ D + YKV + VDA GAWFE+ I
Sbjct: 115 ARARLIDPGFGIYKVNELVDARDVGLGAWFEAHI 148
Score = 37 (18.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 144 GAWFESQITHILVDINKEK 162
G WF+++IT L I++ K
Sbjct: 261 GFWFDAEIT-TLKTISRTK 278
>UNIPROTKB|E2RKA4 [details] [associations]
symbol:UHRF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071158 "positive regulation of cell cycle
arrest" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0005720 "nuclear
heterochromatin" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 Prosite:PS00518 GO:GO:0030154
GO:GO:0071158 GO:GO:0046872 GO:GO:0008283 GO:GO:0008270
GO:GO:0005720 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 GO:GO:0004842
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907 GO:GO:0051865
Gene3D:2.30.30.30 InterPro:IPR014722 Gene3D:2.30.280.10
GeneTree:ENSGT00390000008296 InterPro:IPR021991 Pfam:PF12148
CTD:115426 KO:K15713 OMA:VNHNSKE EMBL:AAEX03007831
RefSeq:XP_864420.2 ProteinModelPortal:E2RKA4
Ensembl:ENSCAFT00000002134 GeneID:474702 KEGG:cfa:474702
NextBio:20850676 Uniprot:E2RKA4
Length = 803
Score = 1456 (517.6 bits), Expect = 1.1e-170, Sum P(2) = 1.1e-170
Identities = 287/622 (46%), Positives = 396/622 (63%)
Query: 159 NKEKPYDEDDLIFKVVHLKYKDDGSSTMKFDDIRPLPKHLITEFNENLIGVRVMGNYNAE 218
N + ++D+I+ + + +Y + G+ + D+RP + + ++NE +G VM NY+ E
Sbjct: 198 NSDSVAADEDVIYHIEYDEYPESGTVEINVKDLRPRARTNL-KWNELNVGDVVMVNYSVE 256
Query: 219 EPRERGYWHDM-IIEKKQGKRLTTELIATVFIGKKGLETRLENCKIKFVKELYKIESPKL 277
P RG+W D I K R EL + +G G E +L +C+I+FV E++KIE P
Sbjct: 257 NPGNRGFWFDAEITALKTISRTKKELRVNIILG--GSEGKLNDCQIRFVNEIFKIEKPGA 314
Query: 278 LAERTAEDEDHMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEEC 337
A+ K LR+ PEC C K+C+ C C IC GK P+ ++C+EC
Sbjct: 315 HPLSLADG--------KFLRKNDPECDICGGDPNKNCRSCSCHICGGKQEPNMQLLCDEC 366
Query: 338 QHYYHIWCLKPPLESVPEDDEWFCPSCKRDTSEVIAPGQKLKDSKKKARMASTNSKSTRD 397
YHI+CL PPL+ VPE++ W+CPSCK D+SEV+ G+ LK SKKKA+M S +++S RD
Sbjct: 367 NMAYHIYCLNPPLDKVPEEEYWYCPSCKTDSSEVVKAGEGLKMSKKKAKMPSASTESRRD 426
Query: 398 WGKGMACVGRTKVCTIVPSDHFGPIPGIEVGQSYLYRFQASEAGVHRPHVSGIHGREDVG 457
WG+GMACVGRT+ CTIVPS+H+GPIPGI VG ++ +R Q SEAGVHRPHV GIHGR + G
Sbjct: 427 WGRGMACVGRTRECTIVPSNHYGPIPGIPVGSTWRFRVQVSEAGVHRPHVGGIHGRSNDG 486
Query: 458 AFSLVLSGGYEDDVDDGDSFLYTGSGGRDLSGNKRTSVQSFDQTLTRMNKALARNCNAPI 517
A+SLVL+GG+ D+VD GD F YTGSGG++L+GNKR S DQTLT MN+ALA NC+AP+
Sbjct: 487 AYSLVLAGGFADEVDRGDEFTYTGSGGKNLAGNKRIGAPSADQTLTNMNRALALNCDAPL 546
Query: 518 DDKRGNEAVDWKKGKPVRVMRNFHGAKHSKYAPKEGNRYDGIYKVVKYYP-VKGSSDFIV 576
DDK G E+ +W+ GKPVRV+R+F G K SKYAP+EGNRYDGIYKVVKY+P + S F+V
Sbjct: 547 DDKIGAESRNWRAGKPVRVIRSFKGRKISKYAPEEGNRYDGIYKVVKYWPEISSSHGFLV 606
Query: 577 WRFHLQRDDEAPAPWTEEGKKRIKDLGLQMIYPEGYXXXXXXXXXXXXNLKRKVSSE--- 633
WR+ L+RDD PAPWT EG +R + L L++ YP GY + K+ +
Sbjct: 607 WRYLLRRDDVEPAPWTSEGIERSRRLCLRLQYPVGYPSDKEGKKTKGQSKKQASEASKRP 666
Query: 634 -TLGE----SKVKKSK------QVYTLPSSVLEHINNDTVHSNVWDEIKALCKEGQKEVL 682
T G+ SKV K+ + + L I D + +WDE+ A EG L
Sbjct: 667 STDGDCPSASKVLKTSDSAEAVEAFQLTPQQQHLIREDHQNQKLWDEVLASLVEGPN-FL 725
Query: 683 EHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKSCLE 742
+ +++ F+C+ CQELVY+P+T DC+H C DCL+R+FK + SCP CR ++ ++ L
Sbjct: 726 KKLEQSFMCVCCQELVYQPVTTDCLHNVCKDCLQRSFKAQ---VFSCPACRHDLGQNYLM 782
Query: 743 THSNDALQSILSTLFPGYSSAR 764
N+ LQ++L FPGYS R
Sbjct: 783 I-PNEILQTLLDLFFPGYSKGR 803
Score = 225 (84.3 bits), Expect = 1.1e-170, Sum P(2) = 1.1e-170
Identities = 54/155 (34%), Positives = 89/155 (57%)
Query: 1 MYVKIRSLDGSKNCVLV-LSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFD 59
M++++R++DGS+ + +S++ I +++ ++ DV + QRLFY+GKQLE+ Y LFD
Sbjct: 1 MWIQVRTIDGSQTRTIEDVSRKATIEELRERVWALFDVRPECQRLFYRGKQLENGYTLFD 60
Query: 60 YNVNLNDVIQLMIKADIDKNYQSSESSSKENIQPNGPACKPNINTENASSSGNNTEPEDF 119
Y+V LND+IQL+++ D D S ++ + + P K SS +T DF
Sbjct: 61 YDVGLNDIIQLLVRPDPDLPSTSKQTDVQAKPCSSSPP-KVKKTPRVGPSSQPSTSTCDF 119
Query: 120 VDLKPADSQYYKVGDYVDAILETEGAWFESQITHI 154
+ + P YKV + VDA GAWFE++I +
Sbjct: 120 L-IDPGIG-LYKVNELVDARDVGLGAWFEARIRSV 152
Score = 40 (19.1 bits), Expect = 4.0e-151, Sum P(2) = 4.0e-151
Identities = 21/84 (25%), Positives = 35/84 (41%)
Query: 62 VNLNDV-IQLMIKADIDKNYQSSESSSKENIQ-PNGPACKPNINTENASSSGNNTEPEDF 119
V+ DV + +A I ++S+ S+ NG +CK N + + N+ E +
Sbjct: 134 VDARDVGLGAWFEARIRSVTRASDGHSRGKTPLKNGSSCKRT----NGNVNHNSKENTNK 189
Query: 120 VDLKPADSQYYKVGDYVDAILETE 143
+D P+ S V D I E
Sbjct: 190 LDSVPSTSNSDSVAADEDVIYHIE 213
Score = 37 (18.1 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 144 GAWFESQITHILVDINKEK 162
G WF+++IT L I++ K
Sbjct: 262 GFWFDAEIT-ALKTISRTK 279
>MGI|MGI:1923718 [details] [associations]
symbol:Uhrf2 "ubiquitin-like, containing PHD and RING finger
domains 2" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS;IDA]
[GO:0005720 "nuclear heterochromatin" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO;ISS]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=ISS] [GO:0042393
"histone binding" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=ISO;ISS] [GO:0071158 "positive regulation of cell cycle
arrest" evidence=ISO] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 MGI:MGI:1923718
Prosite:PS00299 Prosite:PS00518 GO:GO:0030154 GO:GO:0071158
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
GO:GO:0005720 GO:GO:0007049 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 PROSITE:PS01359
GO:GO:0004842 GO:GO:0042393 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 eggNOG:COG3440 Gene3D:2.30.280.10
GeneTree:ENSGT00390000008296 HOGENOM:HOG000124662
HOVERGEN:HBG059298 InterPro:IPR021991 Pfam:PF12148
OrthoDB:EOG408N7M CTD:115426 KO:K15713 OMA:VNHNSKE EMBL:AB116653
EMBL:AF274047 EMBL:AK031036 EMBL:AK041564 EMBL:AK042321
EMBL:AK051743 EMBL:AK080925 EMBL:BC060241 IPI:IPI00169767
IPI:IPI00607019 IPI:IPI00757694 RefSeq:NP_659122.2
UniGene:Mm.313364 ProteinModelPortal:Q7TMI3 SMR:Q7TMI3
STRING:Q7TMI3 PhosphoSite:Q7TMI3 PRIDE:Q7TMI3
Ensembl:ENSMUST00000025739 GeneID:109113 KEGG:mmu:109113
UCSC:uc008hef.1 UCSC:uc008heh.1 UCSC:uc008hei.1 InParanoid:Q7TMI3
NextBio:361658 Bgee:Q7TMI3 Genevestigator:Q7TMI3
GermOnline:ENSMUSG00000024817 Uniprot:Q7TMI3
Length = 803
Score = 1449 (515.1 bits), Expect = 3.0e-170, Sum P(2) = 3.0e-170
Identities = 288/622 (46%), Positives = 393/622 (63%)
Query: 159 NKEKPYDEDDLIFKVVHLKYKDDGSSTMKFDDIRPLPKHLITEFNENLIGVRVMGNYNAE 218
N + ++D+I+ + + +Y + G M D+RP + ++ ++NE +G VM NYN E
Sbjct: 198 NSDSVAADEDVIYHIEYDEYPESGILEMNVKDLRPRARTIL-KWNELNVGDVVMVNYNVE 256
Query: 219 EPRERGYWHDM-IIEKKQGKRLTTELIATVFIGKKGLETRLENCKIKFVKELYKIESPKL 277
P +RG+W+D I K R E+ VF+G G E L +C++ V E++KIE P
Sbjct: 257 NPGKRGFWYDAEITTLKTISRTKKEVRVKVFLG--GSEGTLNDCRVMSVDEIFKIEKPGA 314
Query: 278 LAERTAEDEDHMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEEC 337
A+ K LR+ PEC C K C C C C K P+ ++C+EC
Sbjct: 315 HPISFADG--------KFLRKNDPECDLCGGDPDKTCHMCSCHKCGEKRDPNMQLLCDEC 366
Query: 338 QHYYHIWCLKPPLESVPEDDEWFCPSCKRDTSEVIAPGQKLKDSKKKARMASTNSKSTRD 397
YHI+CL PPL+ VPE++ W+CPSCK D+SEV+ G++LK SKKKA+M S +++S RD
Sbjct: 367 NMAYHIYCLSPPLDKVPEEEYWYCPSCKTDSSEVVKAGERLKLSKKKAKMPSASTESRRD 426
Query: 398 WGKGMACVGRTKVCTIVPSDHFGPIPGIEVGQSYLYRFQASEAGVHRPHVSGIHGREDVG 457
WG+GMACVGRTK CTIVPS+H+GPIPGI VG ++ +R Q SEAGVHRPHV GIHGR + G
Sbjct: 427 WGRGMACVGRTKECTIVPSNHYGPIPGIPVGSTWRFRVQVSEAGVHRPHVGGIHGRSNDG 486
Query: 458 AFSLVLSGGYEDDVDDGDSFLYTGSGGRDLSGNKRTSVQSFDQTLTRMNKALARNCNAPI 517
A+SLVL+GG+ED+VD GD F YTGSGG++L+GNKR S DQTLT MN+ALA NC+AP+
Sbjct: 487 AYSLVLAGGFEDEVDRGDEFTYTGSGGKNLAGNKRIGAPSADQTLTNMNRALALNCDAPL 546
Query: 518 DDKRGNEAVDWKKGKPVRVMRNFHGAKHSKYAPKEGNRYDGIYKVVKYYP-VKGSSDFIV 576
DDK G E+ +W+ GKPVRV+R+F G K SKYAP+EGNRYDGIYKVVKY+P + S F+V
Sbjct: 547 DDKIGAESRNWRAGKPVRVIRSFKGRKISKYAPEEGNRYDGIYKVVKYWPEISSSHGFLV 606
Query: 577 WRFHLQRDDEAPAPWTEEGKKRIKDLGLQMIYPEGYXXXXXXXXXXXXN-------LKRK 629
WR+ L+RDD PAPWT EG +R + L L++ YP GY + KR
Sbjct: 607 WRYLLRRDDVEPAPWTSEGIERSRRLCLRLQYPAGYPSEKEGKKTKGQSKKQGSEATKRP 666
Query: 630 VSS-ETLGESKVKKSK------QVYTLPSSVLEHINNDTVHSNVWDEIKALCKEGQKEVL 682
S E G+SKV K+ + + L I D + +WDE+ A EG L
Sbjct: 667 ASDDECPGDSKVLKASDSTDAVEAFQLTPQQQRLIREDCQNQKLWDEVLASLVEGPN-FL 725
Query: 683 EHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKSCLE 742
+ +++ F+C+ CQELVY+P+T +C H C DCL+R+FK + SCP CR ++ ++ +
Sbjct: 726 KKLEQSFMCVCCQELVYQPVTTECFHNVCKDCLQRSFKAQ---VFSCPACRHDLGQNYVM 782
Query: 743 THSNDALQSILSTLFPGYSSAR 764
N+ LQ++L FPGYS R
Sbjct: 783 V-LNETLQTLLDLFFPGYSKGR 803
Score = 228 (85.3 bits), Expect = 3.0e-170, Sum P(2) = 3.0e-170
Identities = 53/154 (34%), Positives = 89/154 (57%)
Query: 1 MYVKIRSLDGSKNCVLV-LSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFD 59
M++++R++DGS+ + +S++ I +++ ++ DV + QRLFY+GKQLE+ Y LFD
Sbjct: 1 MWIQVRTIDGSQTRTIEDVSRKATIEELRERVWALFDVRPECQRLFYRGKQLENGYTLFD 60
Query: 60 YNVNLNDVIQLMIKADIDKNYQSSESSSKENIQPNGPACKPNINTENASSSGNNTEPEDF 119
Y+V LND+IQL+++ D S S+SK+N P+ + + G++++P
Sbjct: 61 YDVGLNDIIQLLVRPD-----SSLPSTSKQNDAQVKPSSHNPPKVKKTARGGSSSQPSTS 115
Query: 120 VDLKPADSQY--YKVGDYVDAILETEGAWFESQI 151
D + YKV + VDA GAWFE+ I
Sbjct: 116 ARTCLIDPGFGLYKVNELVDARDVGLGAWFEAHI 149
>ZFIN|ZDB-GENE-040426-2039 [details] [associations]
symbol:uhrf1 "ubiquitin-like, containing PHD and
RING finger domains, 1" species:7955 "Danio rerio" [GO:0042393
"histone binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0002088 "lens development in camera-type eye"
evidence=IMP] [GO:0031100 "organ regeneration" evidence=IMP]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS;IMP]
[GO:0016574 "histone ubiquitination" evidence=ISS] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0005657 "replication fork" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] [GO:0000790 "nuclear
chromatin" evidence=ISS] [GO:0000791 "euchromatin" evidence=ISS]
[GO:0000792 "heterochromatin" evidence=ISS] [GO:0044729
"hemi-methylated DNA-binding" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00299 Prosite:PS00518
ZFIN:ZDB-GENE-040426-2039 GO:GO:0005737 GO:GO:0046872 GO:GO:0031100
GO:GO:0008270 GO:GO:0006351 GO:GO:0000122 GO:GO:0007049
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787 GO:GO:0051865
GO:GO:0000792 GO:GO:0005657 GO:GO:0016574 GO:GO:0002088
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
KO:K10638 Gene3D:2.30.280.10 CTD:29128 GeneTree:ENSGT00390000008296
OMA:HVEPGLQ GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148
EMBL:AY648713 EMBL:BX927276 EMBL:FP360035 EMBL:BC058055
IPI:IPI00497177 RefSeq:NP_998242.1 RefSeq:XP_003201004.1
UniGene:Dr.77703 PRIDE:E7EZF3 Ensembl:ENSDART00000012551
Ensembl:ENSDART00000121555 Ensembl:ENSDART00000122573
Ensembl:ENSDART00000126951 GeneID:100538017 GeneID:406350
KEGG:dre:100538017 KEGG:dre:406350 NextBio:20817968
ArrayExpress:E7EZF3 Bgee:E7EZF3 Uniprot:E7EZF3
Length = 776
Score = 1646 (584.5 bits), Expect = 2.8e-169, P = 2.8e-169
Identities = 341/794 (42%), Positives = 490/794 (61%)
Query: 1 MYVKIRSLDGSK-NCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFD 59
M++++R++DG + + V LSK T + +++ +I +V ++QRLFY+GKQ+ED + +FD
Sbjct: 1 MWIQVRTMDGKETHRVDSLSKLTKVDELRVKIAELFNVEPERQRLFYRGKQMEDGHTIFD 60
Query: 60 YNVNLNDVIQLMIKADI-------DKNYQSSESSS---KENIQPNGPACKPNINTENASS 109
YNV LND++QL+++ + DK + S+S S + + + + ++A +
Sbjct: 61 YNVGLNDIVQLLVRQAVAATVLPKDKEAELSDSDSGCGSAQSESDKGSTHGESDVQSAGA 120
Query: 110 SGNNTEPEDFVDLKPADSQYYKVGDYVDAILETEGAWFESQITHILVDINKEKPYD--ED 167
SG T+ D +D P +YK+ ++VDA GAWFE+QI V + K D +
Sbjct: 121 SGQ-TDTADLID--PGFG-FYKINEFVDARDLNMGAWFEAQI----VKVTKTPAEDGGAE 172
Query: 168 DLIFKVVHLKYKDDGSSTMKFDDIRPLPKHLITEFNENLIGVRVMGNYNAEEPRERGYWH 227
D+++ V + Y ++G ++ D+RP + + ++++ G+ VM NYN ++P+ERGYW+
Sbjct: 173 DIVYHVKYEDYPENGVVQLRGKDVRPRAR-TVYQWHQLEPGMIVMVNYNPDDPKERGYWY 231
Query: 228 DMIIEKKQGKRLTTELIATVFIGKKGLETRLENCKIKFVKELYKIESPKLLAERTAEDED 287
D I++K+ R E+ + +G G L +C+I FV E+YKIE P +AE
Sbjct: 232 DAEIQRKRETRTQREVFGKILLGDAG--DSLNDCRIMFVTEIYKIEEPG-----SAEGPG 284
Query: 288 HMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHYYHIWCLK 347
S P PEC C D K+C+ C C +C K PDK ++C+EC +H +CL
Sbjct: 285 ASSDSPLKKGSNGPECKVCKDDPKKNCRVCNCHVCGIKQDPDKQLLCDECDMAFHTYCLN 344
Query: 348 PPLESVPEDDEWFCPSCKRDTSEVIAPGQKLKDSKKKARMASTNSKSTRDWGKGMACVGR 407
PPL ++P+D++W+CP C+ D SEV+ G+KLK+SKKKA+MAS +S S RDWGKGMACVGR
Sbjct: 345 PPLTTIPDDEDWYCPDCRNDASEVVLAGEKLKESKKKAKMASASSSSQRDWGKGMACVGR 404
Query: 408 TKVCTIVPSDHFGPIPGIEVGQSYLYRFQASEAGVHRPHVSGIHGREDVGAFSLVLSGGY 467
TK CTIVPS+H+GP+PG+ VG + +R Q SE+GVHRPHV+GIHGR + GA+SLVL+GGY
Sbjct: 405 TKQCTIVPSNHYGPVPGVPVGTLWKFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGY 464
Query: 468 EDDVDDGDSFLYTGSGGRDLSGNKRTSVQSFDQTLTRMNKALARNCNAPIDDKRGNEAVD 527
EDDVDDG+ F YTGSGGRDLSGNKRT+ QS DQ LT MN+ALA NCNA ++DK G EA D
Sbjct: 465 EDDVDDGNEFTYTGSGGRDLSGNKRTAEQSCDQKLTNMNRALALNCNAAVNDKEGAEAKD 524
Query: 528 WKKGKPVRVMRNFHGAKHSKYAPKEGNRYDGIYKVVKYYPVKGSSDFIVWRFHLQRDDEA 587
WK GKPVRV+R+ G KHSKY+P++GNRYDGIYKVVKY+P KG S F+VWR+ L+R+DE
Sbjct: 525 WKAGKPVRVVRSSKGRKHSKYSPEDGNRYDGIYKVVKYWPEKGKSGFLVWRYLLKRNDEE 584
Query: 588 PAPWTEEGKKRIKDLGLQMIYPEGYXXXXXXXXXXXXNLKRKVSSETLGESKVKKSKQVY 647
APWT +GK+RIK LGL M YPEGY N ET + K K+ Q
Sbjct: 585 SAPWTRDGKERIKKLGLTMQYPEGYLEAVAAKEKEKENKNEDDIEETPTKGKRKRKSQSM 644
Query: 648 TLPSSVLEHINNDT-VHS-NVWDEIKALCKEGQ--KEVLEHIQE------KFL-----CI 692
SS + V + + E KAL K+ + K++ + E +F+
Sbjct: 645 EEKSSPTKGTPKKMKVEAYKLSKEQKALIKDDELNKKLWDEAMESLSLGPRFVNKVEEVF 704
Query: 693 ICQELVYKPITLDCVHTFC-HDCLKRAFKIESDA-CNSCPYCRKEMNKSCLETHSNDALQ 750
+C + + + + T C H+ + + A +CP CR ++ K+ + N LQ
Sbjct: 705 LC--ICCQEVVYQPITTECQHNVCRECLQRSFKAKVYTCPACRHDLGKN-YQMAVNKPLQ 761
Query: 751 SILSTLFPGYSSAR 764
+IL+ LFPGYSS R
Sbjct: 762 AILTQLFPGYSSGR 775
>MGI|MGI:1338889 [details] [associations]
symbol:Uhrf1 "ubiquitin-like, containing PHD and RING finger
domains, 1" species:10090 "Mus musculus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0000790 "nuclear chromatin" evidence=ISO;IDA]
[GO:0000791 "euchromatin" evidence=ISO] [GO:0000792
"heterochromatin" evidence=ISO;IDA] [GO:0000987 "core promoter
proximal region sequence-specific DNA binding" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA;TAS] [GO:0005657 "replication fork"
evidence=ISO;IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=ISO] [GO:0008283 "cell proliferation"
evidence=TAS] [GO:0008327 "methyl-CpG binding" evidence=ISO]
[GO:0010216 "maintenance of DNA methylation" evidence=ISO;IMP]
[GO:0010390 "histone monoubiquitination" evidence=IDA] [GO:0016363
"nuclear matrix" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031493
"nucleosomal histone binding" evidence=IDA] [GO:0032270 "positive
regulation of cellular protein metabolic process" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO;IDA]
[GO:0042393 "histone binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISO;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=ISO]
InterPro:IPR001841 InterPro:IPR000626 InterPro:IPR001965
InterPro:IPR003105 InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628
Pfam:PF02182 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015
SMART:SM00184 SMART:SM00213 SMART:SM00249 SMART:SM00466
UniPathway:UPA00143 MGI:MGI:1338889 Prosite:PS00299 Prosite:PS00518
GO:GO:0046872 GO:GO:0008283 GO:GO:0008270 GO:GO:0006281
GO:GO:0006351 GO:GO:0000122 GO:GO:0007049 GO:GO:0000790
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842 GO:GO:0016363
GO:GO:0035064 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907
GO:GO:0042787 GO:GO:0051865 GO:GO:0000792 GO:GO:0005657
GO:GO:0010390 GO:GO:0031493 GO:GO:0010216 Gene3D:2.30.30.30
InterPro:IPR014722 GO:GO:0000791 eggNOG:COG3440 KO:K10638
Gene3D:2.30.280.10 CTD:29128 GeneTree:ENSGT00390000008296
HOGENOM:HOG000124662 HOVERGEN:HBG059298 OMA:HVEPGLQ GO:GO:0044729
InterPro:IPR021991 Pfam:PF12148 OrthoDB:EOG408N7M EMBL:D87908
EMBL:AF274046 EMBL:AK075819 EMBL:AK143688 EMBL:AK145376
EMBL:AK145543 EMBL:AK146951 EMBL:AK147046 EMBL:AK150489
EMBL:AK151701 EMBL:AK151837 EMBL:AK152930 EMBL:AK153083
EMBL:AC026385 EMBL:BC022167 EMBL:AB066246 IPI:IPI00130200
RefSeq:NP_001104548.1 RefSeq:NP_001104549.1 RefSeq:NP_001104550.1
RefSeq:NP_035061.3 UniGene:Mm.42196 PDB:2ZKD PDB:2ZKE PDB:2ZKF
PDB:2ZKG PDB:2ZO0 PDB:2ZO1 PDB:2ZO2 PDB:3F8I PDB:3F8J PDB:3FDE
PDBsum:2ZKD PDBsum:2ZKE PDBsum:2ZKF PDBsum:2ZKG PDBsum:2ZO0
PDBsum:2ZO1 PDBsum:2ZO2 PDBsum:3F8I PDBsum:3F8J PDBsum:3FDE
ProteinModelPortal:Q8VDF2 SMR:Q8VDF2 MINT:MINT-1172910
STRING:Q8VDF2 PhosphoSite:Q8VDF2 REPRODUCTION-2DPAGE:Q8VDF2
PRIDE:Q8VDF2 Ensembl:ENSMUST00000001258 Ensembl:ENSMUST00000113035
Ensembl:ENSMUST00000113038 Ensembl:ENSMUST00000113039 GeneID:18140
KEGG:mmu:18140 InParanoid:Q8VDF2 EvolutionaryTrace:Q8VDF2
NextBio:293384 Bgee:Q8VDF2 Genevestigator:Q8VDF2
GermOnline:ENSMUSG00000001228 Uniprot:Q8VDF2
Length = 782
Score = 1605 (570.0 bits), Expect = 6.2e-165, P = 6.2e-165
Identities = 345/794 (43%), Positives = 478/794 (60%)
Query: 1 MYVKIRSLDGSK-NCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFD 59
M++++R++DG + + V LS+ T + +++ +IE V QRLFY+GKQ+ED + LFD
Sbjct: 1 MWIQVRTMDGKETHTVNSLSRLTKVQELRKKIEEVFHVEPQLQRLFYRGKQMEDGHTLFD 60
Query: 60 YNVNLNDVIQLMIKADIDKNYQSSESSSKENIQPNGPACKPNINTENASSSGNNTEPEDF 119
Y+V LND IQL+++ + + E S+ + +G + + ++++ E +D
Sbjct: 61 YDVRLNDTIQLLVRQSLALPLSTKERDSELSDSDSGYGVGHSESDKSSTHGEGAAEADDK 120
Query: 120 VDLKPADSQYYKVGDYVDAILETEGAWFESQITHILVD-INKEKPYD-------EDDLIF 171
+ D YKV +YVD GAWFE+Q+ + +++++P EDD+++
Sbjct: 121 TVWEDTDLGLYKVNEYVDVRDNIFGAWFEAQVVQVQKRALSEDEPCSSSAVKTSEDDIMY 180
Query: 172 KVVHLKYKDDGSSTMKFDDIRPLPKHLITEFNENL-IGVRVMGNYNAEEPRERGYWHDMI 230
V + Y + G +K ++R + +I ENL +G VM NYN + PR+RG+W+D+
Sbjct: 181 HVKYDDYPEHGVDIVKAKNVRARARTVIPW--ENLEVGQVVMANYNVDYPRKRGFWYDVE 238
Query: 231 IEKKQGKRLTTELIATVFIGKKGLETRLENCKIKFVKELYKIESPKLLAERTAEDEDHMS 290
I +K+ R EL + + +++L NC+I FV E+ IE PK A S
Sbjct: 239 ICRKRQTRTARELYGNIRLLN---DSQLNNCRIMFVDEVLMIELPKERRPLIASP----S 291
Query: 291 TEPKTLRQIV---PECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHYYHIWCLK 347
P LR P C C D E K C+ C C +C G+ +P+K ++C+EC +H++CLK
Sbjct: 292 QPPPALRNTGKSGPSCRFCKDDENKPCRKCACHVCGGREAPEKQLLCDECDMAFHLYCLK 351
Query: 348 PPLESVPEDDEWFCPSCKRDTSEVIAPGQKLKDSKKKARMASTNSKSTRDWGKGMACVGR 407
PPL SVP + EW+CPSC+ D+SEV+ G+KLK+SKKKA+MAS S S RDWGKGMACVGR
Sbjct: 352 PPLTSVPPEPEWYCPSCRTDSSEVVQAGEKLKESKKKAKMASATSSSRRDWGKGMACVGR 411
Query: 408 TKVCTIVPSDHFGPIPGIEVGQSYLYRFQASEAGVHRPHVSGIHGREDVGAFSLVLSGGY 467
T CTIVP++HFGPIPG+ VG + +R Q SE+GVHRPHV+GIHGR + GA+SLVL+GGY
Sbjct: 412 TTECTIVPANHFGPIPGVPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGY 471
Query: 468 EDDVDDGDSFLYTGSGGRDLSGNKRTSVQSFDQTLTRMNKALARNCNAPIDDKRGNEAVD 527
EDDVD+G+ F YTGSGGRDLSGNKRT+ QS DQ LT N+ALA NC++PI++K G EA D
Sbjct: 472 EDDVDNGNYFTYTGSGGRDLSGNKRTAGQSSDQKLTNNNRALALNCHSPINEK-GAEAED 530
Query: 528 WKKGKPVRVMRNFHGAKHSKYAPKEGNRYDGIYKVVKYYPVKGSSDFIVWRFHLQRDDEA 587
W++GKPVRV+RN G KHSKYAP EGNRYDGIYKVVKY+P +G S F+VWR+ L+RDD
Sbjct: 531 WRQGKPVRVVRNMKGGKHSKYAPAEGNRYDGIYKVVKYWPERGKSGFLVWRYLLRRDDTE 590
Query: 588 PAPWTEEGKKRIKDLGLQMIYPEGYXXXXXXXXXXXXN----LKRKVSSETLGESKVKKS 643
P PWT EGK R + LGL M YPEGY L++ SS G+SK K +
Sbjct: 591 PEPWTREGKDRTRQLGLTMQYPEGYLEALANKEKSRKRPAKALEQGPSSSKTGKSKQKST 650
Query: 644 KQVYTLP----SSVLEHINNDTVHSNVWDEIKALCKEGQKEVLEHIQEK----FLCII-- 693
+ P S LE +N+ E K K +VL +Q+ FL +
Sbjct: 651 GPTLSSPRASKKSKLEPYTLSEQQANLIKEDKGNAKLWD-DVLTSLQDGPYQIFLSKVKE 709
Query: 694 -CQELVYKPITLDCVHTFC-HDCLKRAFKIESDA-CNSCPYCRKEMNKSCLETHSNDALQ 750
Q + + + V T C H+ K A SCP CR E++ S T N LQ
Sbjct: 710 AFQCICCQELVFRPVTTVCQHNVCKDCLDRSFRAQVFSCPACRFELDHSS-PTRVNQPLQ 768
Query: 751 SILSTLFPGYSSAR 764
+IL+ LFPGY S R
Sbjct: 769 TILNQLFPGYGSGR 782
>UNIPROTKB|F1MFX7 [details] [associations]
symbol:F1MFX7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071158 "positive regulation of cell cycle arrest"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0005720 "nuclear
heterochromatin" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR003105 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00249 SMART:SM00466 Prosite:PS00518 GO:GO:0030154
GO:GO:0071158 GO:GO:0046872 GO:GO:0008283 GO:GO:0008270
GO:GO:0005720 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296
InterPro:IPR021991 Pfam:PF12148 OMA:VNHNSKE EMBL:DAAA02022659
EMBL:DAAA02022660 EMBL:DAAA02022661 IPI:IPI00687692
Ensembl:ENSBTAT00000027737 Uniprot:F1MFX7
Length = 752
Score = 1472 (523.2 bits), Expect = 9.3e-165, Sum P(2) = 9.3e-165
Identities = 288/621 (46%), Positives = 398/621 (64%)
Query: 159 NKEKPYDEDDLIFKVVHLKYKDDGSSTMKFDDIRPLPKHLITEFNENLIGVRVMGNYNAE 218
N + ++D+I+ + + +Y + G+ + D+RP + + +NE +G VM NYN E
Sbjct: 148 NSDSVAADEDVIYHIEYDEYPESGTVEINVKDLRPRARTTL-RWNELNVGDVVMVNYNVE 206
Query: 219 EPRERGYWHDM-IIEKKQGKRLTTELIATVFIGKKGLETRLENCKIKFVKELYKIESPKL 277
P RG+W D I K R EL TVF+G G E +L +C+I+F+ E++KIE P
Sbjct: 207 SPSNRGFWFDAEITTLKTISRTKKELRVTVFLG--GSEGKLNDCQIRFINEIFKIEKPGA 264
Query: 278 LAERTAEDEDHMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEEC 337
A+ K LR+ PEC +C K C+ C C +C GK P+ ++C+EC
Sbjct: 265 HPLSLADG--------KFLRKNDPECDSCGGDPNKKCRSCSCHVCGGKQEPNMQVLCDEC 316
Query: 338 QHYYHIWCLKPPLESVPEDDEWFCPSCKRDTSEVIAPGQKLKDSKKKARMASTNSKSTRD 397
YHI+CL PPL+ VPE++ W+CPSCK D+SEV+ G++LK SKKKA+M S +++S RD
Sbjct: 317 NMAYHIYCLNPPLDKVPEEEYWYCPSCKTDSSEVVKAGERLKMSKKKAKMPSASTESRRD 376
Query: 398 WGKGMACVGRTKVCTIVPSDHFGPIPGIEVGQSYLYRFQASEAGVHRPHVSGIHGREDVG 457
WG+GMACVGRT+ CTIVPS+H+GPIPG+ VG ++ +R Q SEAGVHRPHV GIHGR + G
Sbjct: 377 WGRGMACVGRTRECTIVPSNHYGPIPGVPVGSTWRFRVQVSEAGVHRPHVGGIHGRSNDG 436
Query: 458 AFSLVLSGGYEDDVDDGDSFLYTGSGGRDLSGNKRTSVQSFDQTLTRMNKALARNCNAPI 517
A+SLVL+GG+ D+VD GD F YTGSGG++L+GNKR S DQTLT MN+ALA NC+AP+
Sbjct: 437 AYSLVLAGGFADEVDRGDEFTYTGSGGKNLAGNKRIGAPSADQTLTNMNRALALNCDAPL 496
Query: 518 DDKRGNEAVDWKKGKPVRVMRNFHGAKHSKYAPKEGNRYDGIYKVVKYYP-VKGSSDFIV 576
DDK G E+ +W+ GKPVRV+R+F G K SKYAP+EGNRYDGIYKVVKY+P + S F+V
Sbjct: 497 DDKIGAESRNWRAGKPVRVIRSFKGRKISKYAPEEGNRYDGIYKVVKYWPEISSSHGFLV 556
Query: 577 WRFHLQRDDEAPAPWTEEGKKRIKDLGLQMIYPEGYXXXXXXXXXXXXNLKRKVSS---- 632
WR+ L+RDD PAPWT EG +R + L L++ YP GY + K + +S
Sbjct: 557 WRYLLRRDDVEPAPWTSEGIERSRRLCLRLQYPVGYPSDKEGKKTKGQSKKARGTSKRPS 616
Query: 633 ---ETLGESKV-KKSKQVYTLPSSVL----EH-INNDTVHSNVWDEIKALCKEGQKEVLE 683
+ SKV K S + + L +H I D + +WDE+ A EG L+
Sbjct: 617 ADDDCPSASKVLKPSDSAEAVEAFQLTPQQQHLIREDHQNQKLWDEVLASLVEGPN-FLK 675
Query: 684 HIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKSCLET 743
+++ F+C+ CQELVY+P+T DC+H C DCL+R+FK + SCP CR ++ ++ +
Sbjct: 676 KLEQSFMCVCCQELVYQPVTTDCLHNVCKDCLQRSFKAQ---VFSCPACRHDLGQNYIMI 732
Query: 744 HSNDALQSILSTLFPGYSSAR 764
N LQ++L FPGYS R
Sbjct: 733 -PNAVLQTLLDLFFPGYSKGR 752
Score = 153 (58.9 bits), Expect = 9.3e-165, Sum P(2) = 9.3e-165
Identities = 39/102 (38%), Positives = 55/102 (53%)
Query: 50 QLEDEYMLFDYNVNLNDVIQLMIKADIDKNYQSSESSSKENIQPNGPACKPNINTENASS 109
QLE+ Y LFDY+V LND+IQL+++ D D S ++ ++ N P K S
Sbjct: 1 QLENGYTLFDYDVGLNDIIQLLVRPDPDLPSTSKQTDTQAKPYSNSPP-KVKKTPRVGPS 59
Query: 110 SGNNTEPEDFVDLKPADSQYYKVGDYVDAILETEGAWFESQI 151
S +T DF+ + P YKV + VDA GAWFE++I
Sbjct: 60 SQPSTSTRDFL-IDPGIG-LYKVNELVDARDVALGAWFEARI 99
Score = 40 (19.1 bits), Expect = 8.1e-153, Sum P(2) = 8.1e-153
Identities = 16/68 (23%), Positives = 29/68 (42%)
Query: 62 VNLNDV-IQLMIKADIDKNYQSSESSSKENIQ-PNGPACKPNINTENASSSGNNTEPEDF 119
V+ DV + +A I ++S+ S+ NG +CK N +S N + ++
Sbjct: 84 VDARDVALGAWFEARIHSVTRASDGHSRGKTPLKNGSSCKRTNGNVNHNSKENTKKLDNV 143
Query: 120 VDLKPADS 127
+DS
Sbjct: 144 PSTSNSDS 151
Score = 37 (18.1 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 144 GAWFESQITHILVDINKEK 162
G WF+++IT L I++ K
Sbjct: 212 GFWFDAEIT-TLKTISRTK 229
>RGD|1595855 [details] [associations]
symbol:Uhrf1 "ubiquitin-like with PHD and ring finger domains 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0000790 "nuclear chromatin" evidence=ISO;ISS] [GO:0000791
"euchromatin" evidence=ISO;ISS] [GO:0000792 "heterochromatin"
evidence=ISO;ISS] [GO:0000987 "core promoter proximal region
sequence-specific DNA binding" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;ISS] [GO:0005634
"nucleus" evidence=ISO] [GO:0005657 "replication fork"
evidence=ISO;ISS] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=ISO;ISS] [GO:0008283 "cell proliferation"
evidence=ISO] [GO:0008327 "methyl-CpG binding" evidence=ISO]
[GO:0010216 "maintenance of DNA methylation" evidence=ISO;ISS]
[GO:0010390 "histone monoubiquitination" evidence=IEA;ISO]
[GO:0016363 "nuclear matrix" evidence=IEA;ISO] [GO:0016574 "histone
ubiquitination" evidence=ISO;ISS] [GO:0031493 "nucleosomal histone
binding" evidence=IEA;ISO] [GO:0032270 "positive regulation of
cellular protein metabolic process" evidence=ISO] [GO:0035064
"methylated histone residue binding" evidence=ISO;ISS] [GO:0042393
"histone binding" evidence=ISO;ISS] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISO;ISS] [GO:0051865 "protein autoubiquitination"
evidence=ISO;ISS] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 RGD:1595855
Prosite:PS00299 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0006351 GO:GO:0000122 GO:GO:0007049
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842
GO:GO:0035064 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907
GO:GO:0042787 GO:GO:0051865 GO:GO:0000792 GO:GO:0005657
GO:GO:0016574 GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722
GO:GO:0000791 KO:K10638 Gene3D:2.30.280.10 CTD:29128
HOVERGEN:HBG059298 GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148
EMBL:AY321334 EMBL:BC099224 IPI:IPI00371346 RefSeq:NP_001008882.1
UniGene:Rn.54318 ProteinModelPortal:Q7TPK1 SMR:Q7TPK1 PRIDE:Q7TPK1
GeneID:316129 KEGG:rno:316129 NextBio:670462 Genevestigator:Q7TPK1
Uniprot:Q7TPK1
Length = 774
Score = 1602 (569.0 bits), Expect = 1.3e-164, P = 1.3e-164
Identities = 345/791 (43%), Positives = 480/791 (60%)
Query: 1 MYVKIRSLDGSK-NCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFD 59
M++++R++DG + + V LS+ T + +++ +IE V QRLFY+GKQ+ED + LFD
Sbjct: 1 MWIQVRTMDGKETHTVNSLSRLTKVQELRKKIEELFHVEPQLQRLFYRGKQMEDGHTLFD 60
Query: 60 YNVNLNDVIQLMIKADIDKNYQSSESSSKENIQPNGPACKPNINTENASSSGNNT-EPED 118
Y+V LND IQL+++ + + E S+ + +G + ++ +S+ G T + +D
Sbjct: 61 YDVRLNDTIQLLVRQSLALPLSTKERDSELSDSDSGYGVGHS-ESDKSSTHGEGTADGDD 119
Query: 119 FVDLKPADSQYYKVGDYVDAILETEGAWFESQITHILVD-INKEKPYD-------EDDLI 170
+ D YKV +YVD GAWFE+Q+ + +++E+P EDD++
Sbjct: 120 KTVWEDTDLGLYKVNEYVDVRDNIFGAWFEAQVVQVQKKALSEEEPCSSSAIMAPEDDIM 179
Query: 171 FKVVHLKYKDDGSSTMKFDDIRPLPKHLITEFNENLIGVRVMGNYNAEEPRERGYWHDMI 230
+ + + Y + G +K ++R + +I + + +G VM NYN + PR+RG+W+D+
Sbjct: 180 YHIKYDDYPEHGVDIVKAKNVRARARTVIP-WEDLEVGQVVMANYNVDYPRKRGFWYDVE 238
Query: 231 IEKKQGKRLTTELIATVFIGKKGLETRLENCKIKFVKELYKIESPKLLAERTAEDEDHMS 290
I +K+ R EL V + +++L NC+I FV E+ KIE P ER+ +
Sbjct: 239 ICRKRQTRTARELYGNVMLLN---DSQLNNCRIIFVDEVLKIELPN---ERSP-----LI 287
Query: 291 TEPKTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHYYHIWCLKPPL 350
P R+ P C C D E K C+ C C IC G+ +P+K ++C+EC +H++CL+PPL
Sbjct: 288 GSPSR-RKSGPSCQYCKDDENKPCRKCACHICGGREAPEKQVLCDECDMAFHLYCLQPPL 346
Query: 351 ESVPEDDEWFCPSCKRDTSEVIAPGQKLKDSKKKARMASTNSKSTRDWGKGMACVGRTKV 410
VP + EW+CPSC+ D+SEV+ G+KLK SKKKA+MAS S S RDWGKGMACVGRT
Sbjct: 347 TCVPPEPEWYCPSCRTDSSEVVQAGEKLKKSKKKAKMASATSSSRRDWGKGMACVGRTTE 406
Query: 411 CTIVPSDHFGPIPGIEVGQSYLYRFQASEAGVHRPHVSGIHGREDVGAFSLVLSGGYEDD 470
CTIVP++HFGPIPG+ VG + +R Q SE+GVHRPHV+GIHGR + GA+SLVL+GGYEDD
Sbjct: 407 CTIVPANHFGPIPGVPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDD 466
Query: 471 VDDGDSFLYTGSGGRDLSGNKRTSVQSFDQTLTRMNKALARNCNAPIDDKRGNEAVDWKK 530
VD+G+ F YTGSGGRDLSGNKRT+ QS DQ LT N+ALA NC++PI++K G EA DW++
Sbjct: 467 VDNGNFFTYTGSGGRDLSGNKRTAGQSSDQKLTNNNRALALNCHSPINEK-GAEAEDWRQ 525
Query: 531 GKPVRVMRNFHGAKHSKYAPKEGNRYDGIYKVVKYYPVKGSSDFIVWRFHLQRDDEAPAP 590
GKPVRV+RN G KHSKYAP EGNRYDGIYKVVKY+P KG S FIVWR+ L+RDD P P
Sbjct: 526 GKPVRVVRNMKGGKHSKYAPAEGNRYDGIYKVVKYWPEKGKSGFIVWRYLLRRDDTEPEP 585
Query: 591 WTEEGKKRIKDLGLQMIYPEGYXXXXXXXXXXXXN----LKRKVSSETLGESKVKKSKQV 646
WT EGK R + LGL M YPEGY L++ SS +G+SK K +
Sbjct: 586 WTREGKDRTRQLGLTMQYPEGYLEALANKEKNRKRPAKALEQGPSSSKIGKSKRKSTGPA 645
Query: 647 YTLP----SSVLEHINNDTVHSNVWDEIKALCKEGQKEVLEHIQEK----FLCII---CQ 695
T P S LE +N+ E K K +VL +Q+ FL + Q
Sbjct: 646 TTSPRVSKKSKLEPYTLPLQQANLIKEDKGNAKLWD-DVLSSLQDGPYQIFLSKVKEAFQ 704
Query: 696 ELVYKPITLDCVHTFC-HDCLKRAFKIESDA-CNSCPYCRKEMNKSCLETHSNDALQSIL 753
+ + + V T C H+ K A SCP CR +++ S T N LQ+IL
Sbjct: 705 CICCQELVFRPVTTVCQHNVCKDCLDRSFRAQVFSCPACRYDLDHSS-PTRVNQPLQTIL 763
Query: 754 STLFPGYSSAR 764
+ LFPGY S R
Sbjct: 764 NQLFPGYGSGR 774
>UNIPROTKB|F1NS44 [details] [associations]
symbol:F1NS44 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005720 "nuclear heterochromatin" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0071158 "positive regulation of cell cycle
arrest" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR003105 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00249 SMART:SM00466 Prosite:PS00518 GO:GO:0030154
GO:GO:0071158 GO:GO:0046872 GO:GO:0008283 GO:GO:0008270
GO:GO:0005720 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296
InterPro:IPR021991 Pfam:PF12148 OMA:VNHNSKE EMBL:AADN02037704
EMBL:AADN02066291 EMBL:AADN02066292 EMBL:AADN02066293
EMBL:AADN02066294 EMBL:AADN02066295 EMBL:AADN02066296
EMBL:AADN02066297 EMBL:AADN02066298 EMBL:AADN02066299
IPI:IPI00589861 Ensembl:ENSGALT00000024273 Uniprot:F1NS44
Length = 755
Score = 1384 (492.3 bits), Expect = 5.5e-156, Sum P(2) = 5.5e-156
Identities = 267/572 (46%), Positives = 366/572 (63%)
Query: 205 NLIGVRVMGNYNAEEPRERGY-WHDMIIEKKQGKRLTTELIATVFIGKKGLETRLENCKI 263
N+I + ++G+ + + RG+ W ++ + R + + I +G E + +CKI
Sbjct: 197 NIIHLFLLGHNISNKKGSRGFKWCARVLLFFKQSRTNKKCRVAIKINLRGPEDTINDCKI 256
Query: 264 KFVKELYKIESPKLLAERTAEDEDHMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICA 323
F++E+YKIE P T D D R+ PEC C K C+ C C +C
Sbjct: 257 LFIEEMYKIEKPGAYP-LTFGDGDFK-------RKSGPECKHCRADPDKECRFCSCYLCG 308
Query: 324 GKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTSEVIAPGQKLKDSKK 383
GK ++C+EC YHI+CL PPL +PED++W+CPSCK D++EV+ G+KLK SKK
Sbjct: 309 GKQDAHMQLLCDECNMAYHIYCLNPPLSKIPEDEDWYCPSCKNDSNEVVKAGEKLKQSKK 368
Query: 384 KARMASTNSKSTRDWGKGMACVGRTKVCTIVPSDHFGPIPGIEVGQSYLYRFQASEAGVH 443
KA+M S +++S RDWGKGMACVGRTK CTIVPS+H+GPIPG+ VG ++ +R Q SEAGVH
Sbjct: 369 KAKMPSASTESQRDWGKGMACVGRTKECTIVPSNHYGPIPGVPVGTTWKFRVQVSEAGVH 428
Query: 444 RPHVSGIHGREDVGAFSLVLSGGYEDDVDD-GDSFLYTGSGGRDLSGNKRTSVQSFDQTL 502
RPHV GIHGR + GA+SLVL G +E + D GD F YTGSGGRDLSGNKR SFDQTL
Sbjct: 429 RPHVGGIHGRSNDGAYSLVLPGDFESCIRDRGDEFTYTGSGGRDLSGNKRIGEHSFDQTL 488
Query: 503 TRMNKALARNCNAPIDDKRGNEAVDWKKGKPVRVMRNFHGAKHSKYAPKEGNRYDGIYKV 562
T MN+ALA NC+AP+DDK G E+ +W+ GKPVRV+R+ G + SKYAP+EGNRYDGIYKV
Sbjct: 489 THMNRALALNCDAPLDDKNGAESKNWRAGKPVRVVRSSKGRRISKYAPEEGNRYDGIYKV 548
Query: 563 VKYYPVKGSSDFIVWRFHLQRDDEAPAPWTEEGKKRIKDLGLQMIYPEGYXXXXXXXXXX 622
VKY+P G F+VWR+ L+RDD PAPWT EG +R K LGL + YPEGY
Sbjct: 549 VKYWPEIGKCGFLVWRYLLRRDDVEPAPWTSEGMERTKKLGLSVQYPEGYLEAMASKEKK 608
Query: 623 XX----NLKRKVSSETLGESKVKKSKQVYTL--PSSVLEH----INNDTVHSNVWDEIKA 672
+K++ +S++ G K K+ Q + + +++ + I D ++ +WDE+ A
Sbjct: 609 DKVKKQTVKQEPTSQSNGNQKSIKASQKHEVIWNTNLTQEQQWLIKEDCMNQKLWDEVLA 668
Query: 673 LCKEGQKEVLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYC 732
KEG L+ +++ F+C+ CQELVY+P+T +C+H C CL+R+F+ E +CP C
Sbjct: 669 SLKEGPN-FLKKLEQSFMCVCCQELVYQPVTTECLHNVCKSCLQRSFRAE---VFTCPAC 724
Query: 733 RKEMNKSCLETHSNDALQSILSTLFPGYSSAR 764
R ++ KS N LQ++L FPGYS R
Sbjct: 725 RYDLGKSYTMV-PNKILQTLLDQFFPGYSKGR 755
Score = 158 (60.7 bits), Expect = 5.5e-156, Sum P(2) = 5.5e-156
Identities = 37/107 (34%), Positives = 60/107 (56%)
Query: 50 QLEDEYMLFDYNVNLNDVIQLMIKADIDKNYQSSESSSKENIQPNGPA-CKPNIN-TENA 107
QLED + LFDYNV LND++QL+I+++ + +S + + P + CK + T +
Sbjct: 1 QLEDGHTLFDYNVGLNDIVQLLIRSESEAPASASMTDQDGEVNPCAISNCKNKVKKTSSG 60
Query: 108 SSSGNNTEPEDFVDLKPADSQYYKVGDYVDAILETEGAWFESQITHI 154
S S +T F+ + P YK+ + VDA + GAWFE+ I ++
Sbjct: 61 SPSQPSTSSRSFL-IDPGIG-LYKINELVDARDVSIGAWFEAHIENV 105
>UNIPROTKB|F1P4F7 [details] [associations]
symbol:UHRF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005657 "replication fork" evidence=IEA] [GO:0010216
"maintenance of DNA methylation" evidence=IEA] [GO:0010390 "histone
monoubiquitination" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0031493 "nucleosomal histone binding"
evidence=IEA] [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00249
SMART:SM00466 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 GO:GO:0000792
Gene3D:2.30.30.30 InterPro:IPR014722 Gene3D:2.30.280.10
GeneTree:ENSGT00390000008296 OMA:HVEPGLQ InterPro:IPR021991
Pfam:PF12148 EMBL:AADN02062015 IPI:IPI00586414
Ensembl:ENSGALT00000006575 Uniprot:F1P4F7
Length = 733
Score = 1520 (540.1 bits), Expect = 6.3e-156, P = 6.3e-156
Identities = 327/751 (43%), Positives = 450/751 (59%)
Query: 50 QLEDEYMLFDYNVNLNDVIQLMIKAD------IDKNYQSSESSSKENIQPNGPA--CKPN 101
Q+ED + LFDY+V LND++QL+++ + K + SE S ++ +G + K +
Sbjct: 1 QMEDGHSLFDYSVGLNDIVQLLVRQSPAVLPAVSKE-KDSELSDTDSGCGSGQSESDKSS 59
Query: 102 INTENASSSGNNTEPEDFVDLKPADSQYYKVGDYVDAILETEGAWFESQITHIL------ 155
N E A + D YK+ D VDA GAWFE+Q+ ++
Sbjct: 60 HNGEGAMDLEGQSSTAAQADWADPGFGLYKIHDLVDARDMNMGAWFEAQVVNVTRRKAAN 119
Query: 156 ---VDINKEKPYDEDDLIFKVVHLKYKDDGSSTMKFDDIRPLPKHLITEFNENLIGVRVM 212
+++ E+D+I+ V + Y ++G + +D+R + ++ ++++ +G VM
Sbjct: 120 ESCAVADQQTTIPEEDVIYHVKYEDYPENGVVELSSNDVRSRARTIL-KWHQLEVGQVVM 178
Query: 213 GNYNAEEPRERGYWHDMIIEKKQGKRLTTELIATVFIGKKGLETRLENCKIKFVKELYKI 272
NYN +EP ERG+W+D I +K+ +L E+ A + +G+ G L +C+I FV ++YKI
Sbjct: 179 VNYNPDEPTERGFWYDAEILQKRETKLIREINAKILLGEAG--DSLNDCRIIFVDDIYKI 236
Query: 273 ESPKLLAERTAEDEDHMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSPDKLI 332
E P + +S P RQ P C C D K C+ C C IC GK PDK +
Sbjct: 237 EEPGSVCP--------ISARPLK-RQSGPVCKACKDNPNKTCRICACHICGGKQDPDKQL 287
Query: 333 VCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTSEVIAPGQKLKDSKKKARMASTNS 392
+C+EC +HI+CL PPL S+P+D++W+CP C+ D SEV+ G+KLK+SKKK +MAS NS
Sbjct: 288 MCDECDMAFHIYCLNPPLSSIPDDEDWYCPECRNDASEVVLAGEKLKESKKKQKMASANS 347
Query: 393 KSTRDWGKGMACVGRTKVCTIVPSDHFGPIPGIEVGQSYLYRFQASEAGVHRPHVSGIHG 452
S RDWGKGMACVGRTK CTIVPS+H+GPIPGI VG + +R Q SE+GVHRPHV+GIHG
Sbjct: 348 SSRRDWGKGMACVGRTKECTIVPSNHYGPIPGIPVGTMWKFRVQVSESGVHRPHVAGIHG 407
Query: 453 REDVGAFSLVLSGGYEDDVDDGDSFLYTGSGGRDLSGNKRTSVQSFDQTLTRMNKALARN 512
R + GA+SLVL+GGYEDD+D G+SF YTGSGGRDLSGNKRT+ QS DQ LT MN+ALA N
Sbjct: 408 RSNDGAYSLVLAGGYEDDIDHGNSFTYTGSGGRDLSGNKRTAEQSCDQKLTNMNRALALN 467
Query: 513 CNAPIDDKRGNEAVDWKKGKPVRVMRNFHGAKHSKYAPKEGNRYDGIYKVVKYYPVKGSS 572
C+API+DK G EA DW+ GKPVRV+RN G KHSKYAP EGNRYDGIYKVVKY+P G S
Sbjct: 468 CSAPINDKNGAEAKDWRAGKPVRVVRNVKGGKHSKYAPVEGNRYDGIYKVVKYWPETGKS 527
Query: 573 DFIVWRFHLQRDDEAPAPWTEEGKKRIKDLGLQMIYPEGYXXXXXXXXXXXXNLKRKVSS 632
F+VWR+ L+RDDE PAPWT+EGK R+K LGL M YPEGY N + +
Sbjct: 528 GFLVWRYLLRRDDEEPAPWTKEGKDRMKKLGLTMQYPEGYLEAVANKDKEN-NGDDEFDT 586
Query: 633 ETLGESKVKKSKQVYTLPSSVLEHINNDTVHS-NVWDEIKALCKEGQ------KEVLEHI 685
G+ K K + + SS V + + K+L + + EVL+ +
Sbjct: 587 PGKGKRKRKSAGAEEKVVSSPAGTPKKTKVEPYKLTTQQKSLIRSDEANEKLWNEVLDAL 646
Query: 686 Q----EKFL-----CIICQELVYKPITLDCVHTFC-HDCLKRAF--KIESDACNSCPYCR 733
+ EKFL +C + + + V T C H+ K ++D SCP CR
Sbjct: 647 KDGPYEKFLNKVEEAFLC--ICCQEVVFRPVTTVCQHNVCKDCLDRSFKADVY-SCPACR 703
Query: 734 KEMNKSCLETHSNDALQSILSTLFPGYSSAR 764
++ K+ N+ LQ+IL+ LFPGY + R
Sbjct: 704 YDLGKN-YTMQVNETLQTILTQLFPGYGNGR 733
>TAIR|locus:2009420 [details] [associations]
symbol:VIM1 "AT1G57820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA;IPI] [GO:0008327 "methyl-CpG binding" evidence=IDA]
[GO:0010428 "methyl-CpNpG binding" evidence=IDA] [GO:0010429
"methyl-CpNpN binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0010369 "chromocenter" evidence=IDA]
[GO:0010385 "double-stranded methylated DNA binding" evidence=IDA]
[GO:0031508 "centromeric heterochromatin assembly" evidence=IMP]
[GO:0032776 "DNA methylation on cytosine" evidence=IMP] [GO:0006325
"chromatin organization" evidence=IPI] [GO:0051301 "cell division"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0090309 "positive regulation of
methylation-dependent chromatin silencing" evidence=IMP]
[GO:0000278 "mitotic cell cycle" evidence=RCA] [GO:0000280 "nuclear
division" evidence=RCA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=RCA] [GO:0000911 "cytokinesis by
cell plate formation" evidence=RCA] [GO:0006260 "DNA replication"
evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006270 "DNA replication initiation"
evidence=RCA] [GO:0006275 "regulation of DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0007000
"nucleolus organization" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0009555 "pollen development"
evidence=RCA] [GO:0016444 "somatic cell DNA recombination"
evidence=RCA] [GO:0016568 "chromatin modification" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0051726 "regulation of cell cycle"
evidence=RCA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR003105 InterPro:IPR019787 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 PROSITE:PS51292 SMART:SM00184
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00518
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0051301
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0004842 InterPro:IPR017907
GO:GO:0010369 HSSP:Q99728 GO:GO:0031508 GO:GO:0010424 GO:GO:0008327
EMBL:AC079732 GO:GO:0010385 eggNOG:COG3440 HOGENOM:HOG000240700
KO:K10638 ProtClustDB:CLSN2679702 GO:GO:0010428 GO:GO:0010429
GO:GO:0090309 Gene3D:2.30.280.10 EMBL:AY065438 EMBL:AY117235
IPI:IPI00542643 IPI:IPI00544062 PIR:E96612 RefSeq:NP_176092.2
RefSeq:NP_974045.1 UniGene:At.28484 ProteinModelPortal:Q8VYZ0
SMR:Q8VYZ0 STRING:Q8VYZ0 EnsemblPlants:AT1G57820.1 GeneID:842157
KEGG:ath:AT1G57820 TAIR:At1g57820 InParanoid:Q8VYZ0 OMA:RSAYAPE
PhylomeDB:Q8VYZ0 Genevestigator:Q8VYZ0 Uniprot:Q8VYZ0
Length = 645
Score = 404 (147.3 bits), Expect = 6.7e-46, Sum P(3) = 6.7e-46
Identities = 101/227 (44%), Positives = 128/227 (56%)
Query: 379 KDSKKKARMASTNSKSTRDWGKGMACVGRTKVCTIVPSDHFGPIP---------GIEVGQ 429
+D KA + +K T GK A G K+ +P DHFGPIP G+ VG+
Sbjct: 229 QDRPDKA-FTTERAKKT---GKANAASG--KIYVTIPPDHFGPIPAENDPVRNQGLLVGE 282
Query: 430 SYLYRFQASEAGVHRPHVSGIHGREDVGAFSLVLSGGYEDDVDDGDSFLYTGSGGRDLSG 489
S+ R + + G H PHV+GI G+ GA S+ LSGGY+DD D G+ FLYTGSGGRDLSG
Sbjct: 283 SWEDRLECRQWGAHFPHVAGIAGQSTYGAQSVALSGGYKDDEDHGEWFLYTGSGGRDLSG 342
Query: 490 NKRTSV-QSFDQTLTRMNKALARNCNAPIDDKRGNEAVDWKKGKPVRVMRNFHGAKHSKY 548
NKRT+ QSFDQ + N AL +C K G PVRV+R+ H K S Y
Sbjct: 343 NKRTNKEQSFDQKFEKSNAALKLSC---------------KLGYPVRVVRS-HKEKRSAY 386
Query: 549 APKEGNRYDGIYKVVKYYPVKG-SSDFIVWRFHLQRDDEAPAPWTEE 594
AP+EG RYDG+Y++ K + G F V R+ R D PAPWT +
Sbjct: 387 APEEGVRYDGVYRIEKCWRKVGVQGSFKVCRYLFVRCDNEPAPWTSD 433
Score = 93 (37.8 bits), Expect = 6.7e-46, Sum P(3) = 6.7e-46
Identities = 26/87 (29%), Positives = 39/87 (44%)
Query: 671 KALCKEGQKEVLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAF--KI---ESDA 725
KA+ + + ++F C ICQ+++ P+T C H FC CL+ F K E
Sbjct: 498 KAIKAAHSNTMRARLLKEFKCQICQQVLTLPVTTPCAHNFCKACLEAKFAGKTLVRERST 557
Query: 726 CNSCPYCRKE-MNKSCLETHSNDALQS 751
RK +N C T +D LQ+
Sbjct: 558 GGRTLRSRKNVLNCPCCPTDISDFLQN 584
Score = 91 (37.1 bits), Expect = 6.7e-46, Sum P(3) = 6.7e-46
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 314 CKDCG-CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTSEVI 372
C G C C P++ + C C +H+ CL P +++ +W CP C + +
Sbjct: 9 CDGDGVCMRCKSNPPPEESLTCGTCVTPWHVSCLSSPPKTLASTLQWHCPDCSGEIDPLP 68
Query: 373 APG 375
G
Sbjct: 69 VSG 71
Score = 80 (33.2 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 675 KEGQKEVLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSC 729
K +VL + + +C C +L +P+T C H C C ++ C C
Sbjct: 130 KNPNLDVLSALGDNLMCSFCMQLPERPVTKPCGHNACLKCFEKWMGQGKRTCGKC 184
>TAIR|locus:2164835 [details] [associations]
symbol:VIM3 "VARIANT IN METHYLATION 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0042393
"histone binding" evidence=IEA] [GO:0008327 "methyl-CpG binding"
evidence=IDA] [GO:0010428 "methyl-CpNpG binding" evidence=IDA]
[GO:0010429 "methyl-CpNpN binding" evidence=IDA] [GO:0032776 "DNA
methylation on cytosine" evidence=IMP] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=IMP] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0090309 "positive regulation of
methylation-dependent chromatin silencing" evidence=IMP]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR003105
Pfam:PF02182 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015
SMART:SM00184 SMART:SM00249 SMART:SM00466 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0010228
GO:GO:0004842 GO:GO:0042393 InterPro:IPR017907 HSSP:P38398
EMBL:AB012243 GO:GO:0010424 GO:GO:0008327 EMBL:BT010573
EMBL:AK176778 EMBL:AK221256 IPI:IPI00535078 RefSeq:NP_198771.1
UniGene:At.30336 ProteinModelPortal:Q9FKA7 SMR:Q9FKA7 STRING:Q9FKA7
PRIDE:Q9FKA7 EnsemblPlants:AT5G39550.1 GeneID:833951
KEGG:ath:AT5G39550 TAIR:At5g39550 eggNOG:COG3440
HOGENOM:HOG000240700 InParanoid:Q9FKA7 KO:K10638 OMA:TKCSVEA
PhylomeDB:Q9FKA7 ProtClustDB:CLSN2679702 Genevestigator:Q9FKA7
GO:GO:0010428 GO:GO:0010429 GO:GO:0090309 Gene3D:2.30.280.10
Uniprot:Q9FKA7
Length = 617
Score = 386 (140.9 bits), Expect = 6.8e-43, Sum P(3) = 6.8e-43
Identities = 95/225 (42%), Positives = 126/225 (56%)
Query: 381 SKKKARMASTNSKSTRDWGKGMACVGRTKVCTIVPSDHFGPIP---------GIEVGQSY 431
++ + A T ++ + GK A G K +P DHFGPIP G+ VG+S+
Sbjct: 213 NQDRPEKAFTTERAVKT-GKANAASG--KFFVTIPRDHFGPIPAENDVTRKQGVLVGESW 269
Query: 432 LYRFQASEAGVHRPHVSGIHGREDVGAFSLVLSGGYEDDVDDGDSFLYTGSGGRDLSGNK 491
R + + G H PH++GI G+ VGA S+ LSGGY+DD D G+ FLYTGSGGRDLSGNK
Sbjct: 270 EDRQECRQWGAHFPHIAGIAGQSAVGAQSVALSGGYDDDEDHGEWFLYTGSGGRDLSGNK 329
Query: 492 RTSV-QSFDQTLTRMNKALARNCNAPIDDKRGNEAVDWKKGKPVRVMRNFHGAKHSKYAP 550
R + QS DQ MN++L +C K G PVRV+R++ K S YAP
Sbjct: 330 RINKKQSSDQAFKNMNESLRLSC---------------KMGYPVRVVRSWK-EKRSAYAP 373
Query: 551 KEGNRYDGIYKVVKYYPVKG-SSDFIVWRFHLQRDDEAPAPWTEE 594
EG RYDG+Y++ K + G F V R+ R D PAPWT +
Sbjct: 374 AEGVRYDGVYRIEKCWSNVGVQGSFKVCRYLFVRCDNEPAPWTSD 418
Score = 92 (37.4 bits), Expect = 6.8e-43, Sum P(3) = 6.8e-43
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 675 KEGQKEVLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAF 719
K + + + ++F C IC+E++ P+T C H FC CL+ F
Sbjct: 479 KRAKNTMKARLLKEFSCQICREVLSLPVTTPCAHNFCKACLEAKF 523
Score = 82 (33.9 bits), Expect = 6.8e-43, Sum P(3) = 6.8e-43
Identities = 22/70 (31%), Positives = 30/70 (42%)
Query: 309 VETK-HCKDCG-CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDD-EWFCPSCK 365
+ET+ C G C C ++ + C C +H+ CL P ES+ EW CP C
Sbjct: 3 IETQLPCDGDGVCMRCQVNPPSEETLTCGTCVTPWHVPCLLP--ESLASSTGEWECPDCS 60
Query: 366 RDTSEVIAPG 375
APG
Sbjct: 61 GVVVPSAAPG 70
>TAIR|locus:2013840 [details] [associations]
symbol:VIM2 "VARIANT IN METHYLATION 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0042393
"histone binding" evidence=IEA] [GO:0032776 "DNA methylation on
cytosine" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0090309 "positive regulation of
methylation-dependent chromatin silencing" evidence=IMP]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR001965
InterPro:IPR003105 Pfam:PF02182 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS51015 PROSITE:PS51292 SMART:SM00184 SMART:SM00249
SMART:SM00466 UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 EMBL:AC026480 GO:GO:0016568 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0004842 GO:GO:0042393
InterPro:IPR017907 GO:GO:0008327 eggNOG:COG3440
HOGENOM:HOG000240700 KO:K10638 ProtClustDB:CLSN2679702
GO:GO:0010428 GO:GO:0010429 GO:GO:0090309 Gene3D:2.30.280.10
UniGene:At.35808 UniGene:At.48345 EMBL:BT010568 EMBL:AK175694
EMBL:AK175887 EMBL:AK176012 IPI:IPI00541483 PIR:A96685
RefSeq:NP_176779.2 ProteinModelPortal:Q680I0 SMR:Q680I0
STRING:Q680I0 EnsemblPlants:AT1G66050.1 GeneID:842919
KEGG:ath:AT1G66050 TAIR:At1g66050 InParanoid:Q680I0
PhylomeDB:Q680I0 Genevestigator:Q680I0 Uniprot:Q680I0
Length = 623
Score = 386 (140.9 bits), Expect = 1.7e-42, Sum P(3) = 1.7e-42
Identities = 96/218 (44%), Positives = 124/218 (56%)
Query: 388 ASTNSKSTRDWGKGMACVGRTKVCTIVPSDHFGPIP---------GIEVGQSYLYRFQAS 438
A T ++ + GK A G K +P DHFGPIP G+ VG+S+ R +
Sbjct: 220 AFTTERAVKT-GKANAASG--KFFVTIPRDHFGPIPAANDVTRNQGVLVGESWEDRQECR 276
Query: 439 EAGVHRPHVSGIHGREDVGAFSLVLSGGYEDDVDDGDSFLYTGSGGRDLSGNKRTS-VQS 497
+ GVH PHV+GI G+ VGA S+ LSGGY+DD D G+ FLYTGSGGRDLSGNKR + +QS
Sbjct: 277 QWGVHFPHVAGIAGQAAVGAQSVALSGGYDDDEDHGEWFLYTGSGGRDLSGNKRVNKIQS 336
Query: 498 FDQTLTRMNKALARNCNAPIDDKRGNEAVDWKKGKPVRVMRNFHGAKHSKYAPKEGNRYD 557
DQ MN+AL +C K G PVRV+R++ K S YAP EG RYD
Sbjct: 337 SDQAFKNMNEALRLSC---------------KMGYPVRVVRSWK-EKRSAYAPAEGVRYD 380
Query: 558 GIYKVVKYYPVKGSSDFI-VWRFHLQRDDEAPAPWTEE 594
G+Y++ K + G + R+ R D PAPWT +
Sbjct: 381 GVYRIEKCWSNVGVQGLHKMCRYLFVRCDNEPAPWTSD 418
Score = 94 (38.1 bits), Expect = 1.7e-42, Sum P(3) = 1.7e-42
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 675 KEGQKEVLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAF 719
K+G + + ++F C IC++++ P+T C H FC CL+ F
Sbjct: 482 KKGNNAMKARLLKEFSCQICRKVLSLPVTTPCAHNFCKACLEAKF 526
Score = 77 (32.2 bits), Expect = 1.7e-42, Sum P(3) = 1.7e-42
Identities = 19/64 (29%), Positives = 26/64 (40%)
Query: 314 CKDCG-CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDD-EWFCPSCKRDTSEV 371
C G C C ++ + C C +H+ CL P ES+ +W CP C
Sbjct: 9 CDGDGVCMRCQVNPPSEETLTCGTCVTPWHVSCLLP--ESLASSTGDWECPDCSGVVVPS 66
Query: 372 IAPG 375
APG
Sbjct: 67 AAPG 70
Score = 39 (18.8 bits), Expect = 8.9e-37, Sum P(3) = 8.9e-37
Identities = 9/37 (24%), Positives = 17/37 (45%)
Query: 728 SCPYCRKEMNKSCLETHSNDALQSILSTLFPGYSSAR 764
SC CRK ++ +++ ++ L F G + R
Sbjct: 497 SCQICRKVLSLPVTTPCAHNFCKACLEAKFAGITQLR 533
>TAIR|locus:2013800 [details] [associations]
symbol:VIM4 "VARIANT IN METHYLATION 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0042393
"histone binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR001965 InterPro:IPR003105
Pfam:PF02182 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015
PROSITE:PS51292 SMART:SM00184 SMART:SM00249 SMART:SM00466
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC026480 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0004842 GO:GO:0042393 InterPro:IPR017907
HSSP:P38398 GO:GO:0010424 GO:GO:0008327 eggNOG:COG3440
HOGENOM:HOG000240700 KO:K10638 ProtClustDB:CLSN2679702
GO:GO:0010428 GO:GO:0010429 Gene3D:2.30.280.10 IPI:IPI00535924
PIR:H96684 RefSeq:NP_176778.1 UniGene:At.35808 UniGene:At.48345
ProteinModelPortal:Q9C8E1 SMR:Q9C8E1 STRING:Q9C8E1
EnsemblPlants:AT1G66040.1 GeneID:842917 KEGG:ath:AT1G66040
TAIR:At1g66040 InParanoid:Q9C8E1 OMA:RMESPSW PhylomeDB:Q9C8E1
Genevestigator:Q9C8E1 Uniprot:Q9C8E1
Length = 622
Score = 386 (140.9 bits), Expect = 2.1e-42, Sum P(3) = 2.1e-42
Identities = 96/218 (44%), Positives = 124/218 (56%)
Query: 388 ASTNSKSTRDWGKGMACVGRTKVCTIVPSDHFGPIP---------GIEVGQSYLYRFQAS 438
A T ++ + GK A G K +P DHFGPIP G+ VG+S+ R +
Sbjct: 220 AFTTERAVKT-GKANAASG--KFFVTIPRDHFGPIPAANDVTRNQGVLVGESWEDRQECR 276
Query: 439 EAGVHRPHVSGIHGREDVGAFSLVLSGGYEDDVDDGDSFLYTGSGGRDLSGNKRTS-VQS 497
+ GVH PHV+GI G+ VGA S+ LSGGY+DD D G+ FLYTGSGGRDLSGNKR + +QS
Sbjct: 277 QWGVHFPHVAGIAGQAAVGAQSVALSGGYDDDEDHGEWFLYTGSGGRDLSGNKRVNKIQS 336
Query: 498 FDQTLTRMNKALARNCNAPIDDKRGNEAVDWKKGKPVRVMRNFHGAKHSKYAPKEGNRYD 557
DQ MN+AL +C K G PVRV+R++ K S YAP EG RYD
Sbjct: 337 SDQAFKNMNEALRLSC---------------KMGYPVRVVRSWK-EKRSAYAPAEGVRYD 380
Query: 558 GIYKVVKYYPVKGSSDFI-VWRFHLQRDDEAPAPWTEE 594
G+Y++ K + G + R+ R D PAPWT +
Sbjct: 381 GVYRIEKCWSNVGVQGLHKMCRYLFVRCDNEPAPWTSD 418
Score = 94 (38.1 bits), Expect = 2.1e-42, Sum P(3) = 2.1e-42
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 675 KEGQKEVLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAF 719
K+G + + ++F C IC++++ P+T C H FC CL+ F
Sbjct: 482 KKGNNAMKARLLKEFSCQICRKVLSLPVTTPCAHNFCKACLEAKF 526
Score = 76 (31.8 bits), Expect = 2.1e-42, Sum P(3) = 2.1e-42
Identities = 19/64 (29%), Positives = 26/64 (40%)
Query: 314 CKDCG-CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDD-EWFCPSCKRDTSEV 371
C G C C ++ + C C +H+ CL P ES+ +W CP C
Sbjct: 9 CDGDGVCMRCQVTPPSEETLTCGTCVTPWHVSCLLP--ESLASSTGDWECPDCSGVVVPS 66
Query: 372 IAPG 375
APG
Sbjct: 67 AAPG 70
Score = 39 (18.8 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 9/37 (24%), Positives = 17/37 (45%)
Query: 728 SCPYCRKEMNKSCLETHSNDALQSILSTLFPGYSSAR 764
SC CRK ++ +++ ++ L F G + R
Sbjct: 497 SCQICRKVLSLPVTTPCAHNFCKACLEAKFAGITQLR 533
>TAIR|locus:2009425 [details] [associations]
symbol:VIM5 "VARIANT IN METHYLATION 5" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0042393
"histone binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR003105 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00249
UniPathway:UPA00143 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0004842 GO:GO:0042393 InterPro:IPR017907
GO:GO:0010424 GO:GO:0008327 EMBL:AC079732 eggNOG:COG3440
HOGENOM:HOG000240700 KO:K10638 ProtClustDB:CLSN2679702
GO:GO:0010428 GO:GO:0010429 Gene3D:2.30.280.10 IPI:IPI00546002
PIR:D96612 RefSeq:NP_176091.2 UniGene:At.36964
ProteinModelPortal:Q9FVS2 SMR:Q9FVS2 PRIDE:Q9FVS2
EnsemblPlants:AT1G57800.1 GeneID:842155 KEGG:ath:AT1G57800
TAIR:At1g57800 InParanoid:Q9FVS2 OMA:GTSHEEE PhylomeDB:Q9FVS2
Genevestigator:Q9FVS2 Uniprot:Q9FVS2
Length = 660
Score = 335 (123.0 bits), Expect = 6.7e-38, Sum P(3) = 6.7e-38
Identities = 85/202 (42%), Positives = 114/202 (56%)
Query: 380 DSKKKARMASTNSKSTRDWGKGMACVGRTKVCTIVPSDHFGPIP---------GIEVGQS 430
D++ + A T ++ + G A G K+ +P DHFGPIP G+ VG+S
Sbjct: 239 DNEDRPDKAFTTERAKKT-GNANASSG--KIFVTIPRDHFGPIPAENDPVRNQGLLVGES 295
Query: 431 YLYRFQASEAGVHRPHVSGIHGREDVGAFSLVLSGGYEDDVDDGDSFLYTGSGGRDLSGN 490
+ R + G H PHVSGI G+ GA S+VL+GGY+DD D G+ FLYTGSGGR L GN
Sbjct: 296 WKGRLACRQWGAHFPHVSGIAGQASYGAQSVVLAGGYDDDEDHGEWFLYTGSGGRILKGN 355
Query: 491 KRTS-VQSFDQTLTRMNKALARNCNAPIDDKRGNEAVDWKKGKPVRVMRNFHGAKHSKYA 549
KRT+ VQ+FDQ N+AL +C K G PVRV+R+ K S YA
Sbjct: 356 KRTNTVQAFDQVFLNFNEALRLSC---------------KLGYPVRVVRSTKD-KRSPYA 399
Query: 550 PKEGN-RYDGIYKVVKYYPVKG 570
P+ G RYDG+Y++ K + + G
Sbjct: 400 PQGGLLRYDGVYRIEKCWRIVG 421
Score = 123 (48.4 bits), Expect = 4.7e-14, Sum P(3) = 4.7e-14
Identities = 32/75 (42%), Positives = 43/75 (57%)
Query: 523 NEAV--DWKKGKPVRVMRNFHGAKHSKYAPKEGN-RYDGIYKVVKYYPVKGSSDFIVWRF 579
NEA+ K G PVRV+R+ K S YAP+ G RYDG+Y++ K + + G + RF
Sbjct: 372 NEALRLSCKLGYPVRVVRSTKD-KRSPYAPQGGLLRYDGVYRIEKCWRIVGIQ---MCRF 427
Query: 580 HLQRDDEAPAPWTEE 594
R D PAPWT +
Sbjct: 428 LFVRCDNEPAPWTSD 442
Score = 98 (39.6 bits), Expect = 6.7e-38, Sum P(3) = 6.7e-38
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTSEVIAPG 375
C C P++ + C C +H+ CL P E++ +W CP C +T+ + G
Sbjct: 15 CMRCKSMPPPEESLTCGTCVTPWHVSCLLSPPETLSATLQWLCPDCSGETNPLPVSG 71
Score = 92 (37.4 bits), Expect = 6.7e-38, Sum P(3) = 6.7e-38
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 665 NVWD-EIKALCKEGQKE-----VLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRA 718
NV D E + L +E K + + ++F C ICQ+++ P+T C H FC CL+
Sbjct: 496 NVLDPEERKLLREAIKSANPNTMRARLLKEFKCQICQKVMTNPVTTPCAHNFCKACLESK 555
Query: 719 F 719
F
Sbjct: 556 F 556
>UNIPROTKB|I3LTW3 [details] [associations]
symbol:I3LTW3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GeneTree:ENSGT00390000008296
EMBL:AEMK01185240 EMBL:CU928954 Ensembl:ENSSSCT00000025343
Uniprot:I3LTW3
Length = 113
Score = 398 (145.2 bits), Expect = 3.1e-36, P = 3.1e-36
Identities = 65/105 (61%), Positives = 87/105 (82%)
Query: 332 IVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTSEVIAPGQKLKDSKKKARMASTN 391
++C+EC YHI+CL PPL+ VPE++ W+CPSCK D+SEV+ G++LK SKKKA+M S +
Sbjct: 3 VLCDECNMAYHIYCLNPPLDKVPEEEYWYCPSCKTDSSEVVKAGERLKMSKKKAKMPSAS 62
Query: 392 SKSTRDWGKGMACVGRTKVCTIVPSDHFGPIPGIEVGQSYLYRFQ 436
++S RDWG+GMACVGRTK CTIVPS+H+GPIPGI VG ++ +R Q
Sbjct: 63 TESRRDWGRGMACVGRTKECTIVPSNHYGPIPGIPVGSTWRFRVQ 107
>TAIR|locus:2138591 [details] [associations]
symbol:ORTHL "ORTHRUS-like" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0042393 "histone binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR001841
InterPro:IPR003105 Pfam:PF02182 PROSITE:PS50089 PROSITE:PS51015
SMART:SM00184 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 GO:GO:0005634 GO:GO:0005737 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0042393
EMBL:AF076275 GO:GO:0010424 GO:GO:0008327 eggNOG:COG3440
HOGENOM:HOG000240700 KO:K10638 GO:GO:0010428 GO:GO:0010429
Gene3D:2.30.280.10 EMBL:AC002983 EMBL:AL161512 EMBL:AK175637
EMBL:BT022101 EMBL:AJ608275 IPI:IPI00536405 IPI:IPI00846324
PIR:T00949 PIR:T01825 RefSeq:NP_001078357.1 RefSeq:NP_192599.2
UniGene:At.33741 UniGene:At.48832 ProteinModelPortal:Q681I0
SMR:Q681I0 PaxDb:Q681I0 PRIDE:Q681I0 EnsemblPlants:AT4G08590.1
GeneID:826420 KEGG:ath:AT4G08590 TAIR:At4g08590 InParanoid:Q681I0
OMA:PPANHEQ PhylomeDB:Q681I0 ProtClustDB:CLSN2918572
Genevestigator:Q681I0 Uniprot:Q681I0
Length = 465
Score = 216 (81.1 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 65/194 (33%), Positives = 95/194 (48%)
Query: 409 KVCTIVPSDHFGPIP---------GIEVGQSYLYRFQASEAGVHRPHVSGIHGREDVGAF 459
++ VP DHFGPIP G+ VG+S+ R + + GVH PHVS I G+ED GA
Sbjct: 213 RIYVTVPFDHFGPIPAEHDPVRNQGVLVGESWENRVECRQWGVHLPHVSCIAGQEDYGAQ 272
Query: 460 SLVLSGGYEDDVDDGDSFLYTG-SGGRDLSGNKRTSVQSFDQTLTRMNKALARNCNA--P 516
S+V+SGGY+DD D G+ FLYTG S GR + DQ +N+AL +C P
Sbjct: 273 SVVISGGYKDDEDHGEWFLYTGRSRGRHFANE--------DQEFEDLNEALRVSCEMGYP 324
Query: 517 IDDKRGNEAVDWKKGKPVRVMRNFHGAKHSKYAPKEGNRYDGIYKVVKYYPVKGSSDFIV 576
+ R + + P +R + G + ++ R+ +KV +Y V+ ++
Sbjct: 325 VRVVRSYKD-RYSAYAPKEGVR-YDGVYRIEKCWRKA-RFPDSFKVCRYLFVRCDNEPAP 381
Query: 577 WRFHLQRDDEAPAP 590
W D P P
Sbjct: 382 WNSDESGDRPRPLP 395
Score = 144 (55.7 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 35/84 (41%), Positives = 50/84 (59%)
Query: 523 NEA--VDWKKGKPVRVMRNFHGAKHSKYAPKEGNRYDGIYKVVKYY-PVKGSSDFIVWRF 579
NEA V + G PVRV+R++ ++S YAPKEG RYDG+Y++ K + + F V R+
Sbjct: 312 NEALRVSCEMGYPVRVVRSYKD-RYSAYAPKEGVRYDGVYRIEKCWRKARFPDSFKVCRY 370
Query: 580 HLQRDDEAPAPW-TEEGKKRIKDL 602
R D PAPW ++E R + L
Sbjct: 371 LFVRCDNEPAPWNSDESGDRPRPL 394
Score = 74 (31.1 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 35/137 (25%), Positives = 56/137 (40%)
Query: 308 DVETKHCKDCGCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRD 367
D T C+D CS+C PD+ + C H + CLK + + + ++ C +C+
Sbjct: 98 DAFTAICEDLNCSLC--NQLPDRPVTIL-CGHNF---CLKCFDKWIDQGNQ-ICATCRST 150
Query: 368 TSEVIAPGQKLKDSK-------KKARMASTNSK------STRDWGKGM-----ACVGRTK 409
+ +A ++ S K A+ A + S +D + A +G
Sbjct: 151 IPDKMAANPRVNSSLVSVIRYVKVAKTAGVGTANFFPFTSNQDGPENAFRTKRAKIGEEN 210
Query: 410 VCTI---VPSDHFGPIP 423
I VP DHFGPIP
Sbjct: 211 AARIYVTVPFDHFGPIP 227
>TAIR|locus:2065988 [details] [associations]
symbol:SUVH6 "SU(VAR)3-9 homolog 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IDA] [GO:0016571 "histone methylation"
evidence=IDA] [GO:0008327 "methyl-CpG binding" evidence=IDA]
[GO:0010428 "methyl-CpNpG binding" evidence=IDA] [GO:0010429
"methyl-CpNpN binding" evidence=IDA] Pfam:PF00856
InterPro:IPR001214 InterPro:IPR003105 InterPro:IPR003606
InterPro:IPR007728 InterPro:IPR025794 Pfam:PF02182 Pfam:PF05033
PROSITE:PS50280 PROSITE:PS50867 PROSITE:PS51015 SMART:SM00317
SMART:SM00466 SMART:SM00468 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0000775 GO:GO:0008270 EMBL:AC006340
GO:GO:0008168 GO:GO:0018024 InterPro:IPR003616 SMART:SM00508
PROSITE:PS50868 GO:GO:0016571 GO:GO:0008327 KO:K11420
eggNOG:COG3440 GO:GO:0010428 GO:GO:0010429 Gene3D:2.30.280.10
HOGENOM:HOG000154454 ProtClustDB:CLSN2683680 EMBL:AF344449
EMBL:AY065374 EMBL:BT002751 IPI:IPI00541041 PIR:C84616
RefSeq:NP_850030.1 RefSeq:NP_973514.1 UniGene:At.28511
ProteinModelPortal:Q8VZ17 SMR:Q8VZ17 PaxDb:Q8VZ17 PRIDE:Q8VZ17
EnsemblPlants:AT2G22740.1 EnsemblPlants:AT2G22740.2 GeneID:816804
KEGG:ath:AT2G22740 TAIR:At2g22740 InParanoid:Q8VZ17 OMA:RRIGNDE
PhylomeDB:Q8VZ17 Genevestigator:Q8VZ17 GermOnline:AT2G22740
Uniprot:Q8VZ17
Length = 790
Score = 240 (89.5 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 68/189 (35%), Positives = 95/189 (50%)
Query: 420 GPIPGIEVGQSYLYRFQASEAGVHRPHVSGI----HGREDVGAFSLVLSGGYEDDVDDGD 475
G +PG+EVG + YR + + G+H+P +GI +G+ V A S+V SGGY+D +D+ D
Sbjct: 330 GEVPGVEVGDEFQYRMELNILGIHKPSQAGIDYMKYGKAKV-ATSIVASGGYDDHLDNSD 388
Query: 476 SFLYTGSGGRDLSGNKRTSV--QSFDQTLTRMNKALARNCNAPIDDKRGNEAVDWKKGKP 533
YTG GG + K+ + DQ L N ALA + +K P
Sbjct: 389 VLTYTGQGGNVMQVKKKGEELKEPEDQKLITGNLALATSI---------------EKQTP 433
Query: 534 VRVMRNFHGAKHSKYAPKEGNR-YDGIYKVVKYYPVKGSSDFIVWRFHLQRDDEAPA-PW 591
VRV+R H + H K K GN YDG+Y V KY+ GS V++F L+R P W
Sbjct: 434 VRVIRGKHKSTHDK--SKGGNYVYDGLYLVEKYWQQVGSHGMNVFKFQLRRIPGQPELSW 491
Query: 592 TEEGKKRIK 600
E K + K
Sbjct: 492 VEVKKSKSK 500
>TAIR|locus:2063384 [details] [associations]
symbol:SUVH5 "SU(VAR)3-9 homolog 5" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0040029 "regulation of gene
expression, epigenetic" evidence=TAS] [GO:0042054 "histone
methyltransferase activity" evidence=ISS;IDA] [GO:0010216
"maintenance of DNA methylation" evidence=IGI] [GO:0016571 "histone
methylation" evidence=RCA;IDA] [GO:0031048 "chromatin silencing by
small RNA" evidence=IEP;RCA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=RCA] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0051567 "histone
H3-K9 methylation" evidence=RCA] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR003105 InterPro:IPR003606 InterPro:IPR007728
InterPro:IPR025794 Pfam:PF02182 Pfam:PF05033 PROSITE:PS50280
PROSITE:PS50867 PROSITE:PS51015 SMART:SM00317 SMART:SM00466
SMART:SM00468 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000775 GO:GO:0008270 GO:GO:0010200 GO:GO:0031048
EMBL:AC004667 GO:GO:0042054 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GO:GO:0010216 KO:K11420
eggNOG:COG3440 Gene3D:2.30.280.10 EMBL:AF344448 EMBL:AY062735
EMBL:BT003374 IPI:IPI00526239 PIR:D84765 RefSeq:NP_181061.1
UniGene:At.12724 PDB:3Q0B PDB:3Q0C PDB:3Q0D PDB:3Q0F PDBsum:3Q0B
PDBsum:3Q0C PDBsum:3Q0D PDBsum:3Q0F ProteinModelPortal:O82175
SMR:O82175 IntAct:O82175 PaxDb:O82175 PRIDE:O82175
EnsemblPlants:AT2G35160.1 GeneID:818083 KEGG:ath:AT2G35160
TAIR:At2g35160 HOGENOM:HOG000154454 InParanoid:O82175 OMA:YLVEEYW
PhylomeDB:O82175 ProtClustDB:CLSN2683680 EvolutionaryTrace:O82175
Genevestigator:O82175 GermOnline:AT2G35160 Uniprot:O82175
Length = 794
Score = 239 (89.2 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 64/184 (34%), Positives = 88/184 (47%)
Query: 420 GPIPGIEVGQSYLYRFQASEAGVHRPHVSGIHGREDVG----AFSLVLSGGYEDDVDDGD 475
G +PG+EVG + YR + + G+HRP SGI +D G A S+V SGGY D +D+ D
Sbjct: 365 GTVPGVEVGDEFQYRMELNLLGIHRPSQSGIDYMKDDGGELVATSIVSSGGYNDVLDNSD 424
Query: 476 SFLYTGSGGRDLSGNKRTSVQSFDQTLTRMNKALARNCNAPIDDKRGNEAVDWKKGKPVR 535
+YTG GG G K+ + DQ L N AL + N K PVR
Sbjct: 425 VLIYTGQGGN--VGKKKNNEPPKDQQLVTGNLALKNSIN---------------KKNPVR 467
Query: 536 VMRNFHGAKHSKYAPKEGNRYDGIYKVVKYYPVKGSSDFIVWRFHLQRDDEAPA-PWTEE 594
V+R + YDG+Y V +Y+ GS +V++F L+R P PW E
Sbjct: 468 VIRGIKNTTLQSSVVAKNYVYDGLYLVEEYWEETGSHGKLVFKFKLRRIPGQPELPWKEV 527
Query: 595 GKKR 598
K +
Sbjct: 528 AKSK 531
>TAIR|locus:2159133 [details] [associations]
symbol:SUVH4 "SU(VAR)3-9 homolog 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0010216 "maintenance of DNA
methylation" evidence=IDA] [GO:0016571 "histone methylation"
evidence=RCA;IDA] [GO:0018022 "peptidyl-lysine methylation"
evidence=IDA] [GO:0046974 "histone methyltransferase activity
(H3-K9 specific)" evidence=IDA] [GO:0008327 "methyl-CpG binding"
evidence=IDA] [GO:0010385 "double-stranded methylated DNA binding"
evidence=IDA] [GO:0010428 "methyl-CpNpG binding" evidence=IDA]
[GO:0010429 "methyl-CpNpN binding" evidence=IDA] [GO:0051567
"histone H3-K9 methylation" evidence=RCA;IMP] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006270 "DNA replication
initiation" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0006342 "chromatin silencing" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0008283 "cell proliferation" evidence=RCA] [GO:0009616 "virus
induced gene silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016572
"histone phosphorylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0031047 "gene silencing by RNA"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=RCA] [GO:0051726
"regulation of cell cycle" evidence=RCA] Pfam:PF00856
InterPro:IPR001214 InterPro:IPR003105 InterPro:IPR007728
InterPro:IPR025794 Pfam:PF02182 Pfam:PF05033 PROSITE:PS50280
PROSITE:PS50867 PROSITE:PS51015 SMART:SM00317 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000775 GO:GO:0008270
EMBL:AB005230 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GO:GO:0046974 GO:GO:0010216 GO:GO:0008327 KO:K11420 GO:GO:0010385
eggNOG:COG3440 GO:GO:0010428 GO:GO:0010429 Gene3D:2.30.280.10
HOGENOM:HOG000238382 EMBL:AF344447 EMBL:AF538715 EMBL:BT002313
IPI:IPI00540897 RefSeq:NP_196900.1 UniGene:At.8330
ProteinModelPortal:Q8GZB6 SMR:Q8GZB6 STRING:Q8GZB6 PaxDb:Q8GZB6
PRIDE:Q8GZB6 EnsemblPlants:AT5G13960.1 GeneID:831244
KEGG:ath:AT5G13960 TAIR:At5g13960 InParanoid:Q8GZB6 OMA:DCEGDCA
PhylomeDB:Q8GZB6 ProtClustDB:CLSN2916622 Genevestigator:Q8GZB6
GermOnline:AT5G13960 Uniprot:Q8GZB6
Length = 624
Score = 182 (69.1 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 62/192 (32%), Positives = 91/192 (47%)
Query: 384 KARMASTNSKSTRDWGKGMACVGRTKVCTIVPSDHFGPIPGIEVGQSYLYRFQASEAGVH 443
K + +K +R KG+ + + K + P G +PGI+VG + R + G H
Sbjct: 114 KQYLLCVQAKLSRPDLKGVTEMIKAKAI-LYPRKIIGDLPGIDVGHRFFSRAEMCAVGFH 172
Query: 444 RPHVSGI------HGREDVG-----AFSLVLSGGYEDDVDDGDSFLYTGSGGRDLSGNKR 492
++GI + +E A S+V+SG YEDD+D+ D+ YTG GG +L+GNKR
Sbjct: 173 NHWLNGIDYMSMEYEKEYSNYKLPLAVSIVMSGQYEDDLDNADTVTYTGQGGHNLTGNKR 232
Query: 493 TSVQSFDQTLTRMNKALARNC--NAPIDDKRGNEAVDWKKGKPVRVMRNFHGA-KHSKYA 549
Q DQ L R N AL C N P+ RG+ K RV + G K K+
Sbjct: 233 ---QIKDQLLERGNLALKHCCEYNVPVRVTRGHNC---KSSYTKRVY-TYDGLYKVEKFW 285
Query: 550 PKEGNRYDGIYK 561
++G +YK
Sbjct: 286 AQKGVSGFTVYK 297
>TAIR|locus:2051083 [details] [associations]
symbol:SUVH2 "SU(VAR)3-9 homolog 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0040029 "regulation of gene
expression, epigenetic" evidence=IMP;TAS] [GO:0042054 "histone
methyltransferase activity" evidence=ISS] [GO:0005720 "nuclear
heterochromatin" evidence=IDA] [GO:0016571 "histone methylation"
evidence=RCA;IDA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] Pfam:PF00856
InterPro:IPR001214 InterPro:IPR003105 InterPro:IPR003606
InterPro:IPR007728 InterPro:IPR025794 Pfam:PF02182 Pfam:PF05033
PROSITE:PS50280 PROSITE:PS50867 PROSITE:PS51015 SMART:SM00317
SMART:SM00466 SMART:SM00468 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000775 GO:GO:0008270 GO:GO:0005720 GO:GO:0042054
GO:GO:0018024 GO:GO:0040029 EMBL:AC002332 KO:K11420 eggNOG:COG3440
Gene3D:2.30.280.10 HOGENOM:HOG000238382 EMBL:AF344445
IPI:IPI00548715 PIR:F84743 RefSeq:NP_180887.1 UniGene:At.12115
ProteinModelPortal:O22781 SMR:O22781 STRING:O22781
EnsemblPlants:AT2G33290.1 GeneID:817892 KEGG:ath:AT2G33290
TAIR:At2g33290 InParanoid:O22781 OMA:FEYLARP PhylomeDB:O22781
ProtClustDB:CLSN2685938 Genevestigator:O22781 GermOnline:AT2G33290
Uniprot:O22781
Length = 651
Score = 149 (57.5 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 33/74 (44%), Positives = 43/74 (58%)
Query: 420 GPIPGIEVGQSYLYRFQASEAGVHRPHVSGIH----GREDVG---AFSLVLSGGYEDDVD 472
GP+ G+EVG + YR + G+H +GI R G A S+V+SGGYEDD D
Sbjct: 207 GPVTGVEVGDIFFYRMELCVLGLHGQTQAGIDCLTAERSATGEPIATSIVVSGGYEDDED 266
Query: 473 DGDSFLYTGSGGRD 486
GD +YTG GG+D
Sbjct: 267 TGDVLVYTGHGGQD 280
Score = 80 (33.2 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 531 GKPVRVMRNFHGAKHSKYAPKEGNRYDGIYKVVKYYPVKGSSDFIVWRFHLQRDDEAP 588
G VRV+R G K+ + YDG+YK+V ++ G S F V++F L R + P
Sbjct: 305 GIEVRVIR---GIKYENSISSKVYVYDGLYKIVDWWFAVGKSGFGVFKFRLVRIEGQP 359
>TAIR|locus:2175289 [details] [associations]
symbol:SUVH1 "SU(VAR)3-9 homolog 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=IEA] [GO:0042054
"histone methyltransferase activity" evidence=ISS] [GO:0042393
"histone binding" evidence=IEA] [GO:0040029 "regulation of gene
expression, epigenetic" evidence=TAS] Pfam:PF00856
InterPro:IPR001214 InterPro:IPR003105 InterPro:IPR007728
InterPro:IPR025794 Pfam:PF02182 Pfam:PF05033 PROSITE:PS50280
PROSITE:PS50867 PROSITE:PS51015 SMART:SM00317 SMART:SM00466
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000775
GO:GO:0008270 EMBL:AB005245 eggNOG:COG2940 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868 GO:GO:0040029
KO:K11420 Gene3D:2.30.280.10 EMBL:AF344444 IPI:IPI00548211
RefSeq:NP_196113.1 RefSeq:NP_850767.1 UniGene:At.8375
ProteinModelPortal:Q9FF80 SMR:Q9FF80 PaxDb:Q9FF80 PRIDE:Q9FF80
EnsemblPlants:AT5G04940.1 EnsemblPlants:AT5G04940.2 GeneID:830376
KEGG:ath:AT5G04940 TAIR:At5g04940 HOGENOM:HOG000238382
InParanoid:Q9FF80 OMA:RENGNRE PhylomeDB:Q9FF80
ProtClustDB:CLSN2686453 Genevestigator:Q9FF80 GermOnline:AT5G04940
Uniprot:Q9FF80
Length = 670
Score = 148 (57.2 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 44/123 (35%), Positives = 62/123 (50%)
Query: 397 DWGKGMACVGRTKVCTIVPSDHFGPIPGIEVGQSYLYRFQASEAGVHRPHVSGIH----- 451
D G C+GR V T G +PG+E+G + +RF+ G+H P ++GI
Sbjct: 190 DLKSGSTCMGRG-VRTNTKKRP-GIVPGVEIGDVFFFRFEMCLVGLHSPSMAGIDYLVVK 247
Query: 452 GR--EDVGAFSLVLSGGYEDDVDDGDSFLYTGSGGRDLSGNKRTSVQSFDQTLTRMNKAL 509
G E+ A S+V SG Y++D + D +YTG GG N QS DQ L R N AL
Sbjct: 248 GETEEEPIATSIVSSGYYDNDEGNPDVLIYTGQGG-----NADKDKQSSDQKLERGNLAL 302
Query: 510 ARN 512
++
Sbjct: 303 EKS 305
Score = 72 (30.4 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 520 KRGNEAVD--WKKGKPVRVMRNFHGAKHSKYAPKEGNRYDGIYKVVKYYPVKGSSDFIVW 577
+RGN A++ ++ VRV+R A H+ YDG+Y++ + + KG S +
Sbjct: 296 ERGNLALEKSLRRDSAVRVIRGLKEASHNAKI----YIYDGLYEIKESWVEKGKSGHNTF 351
Query: 578 RFHLQRDDEAP---APWT 592
++ L R P A WT
Sbjct: 352 KYKLVRAPGQPPAFASWT 369
>MGI|MGI:95049 [details] [associations]
symbol:Ubl4 "ubiquitin-like 4" species:10090 "Mus musculus"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0071816
"tail-anchored membrane protein insertion into ER membrane"
evidence=ISO] [GO:0071818 "BAT3 complex" evidence=ISO]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 MGI:MGI:95049
Prosite:PS00299 GO:GO:0006810 InterPro:IPR019955 PROSITE:PS50053
GO:GO:0071818 GO:GO:0071816 InterPro:IPR019954 InterPro:IPR019956
PRINTS:PR00348 EMBL:J04761 HOVERGEN:HBG072205 eggNOG:NOG265285
EMBL:BC010817 IPI:IPI00471341 PIR:I68527 RefSeq:NP_663380.1
UniGene:Mm.3979 ProteinModelPortal:P21126 SMR:P21126 STRING:P21126
PhosphoSite:P21126 PaxDb:P21126 PRIDE:P21126
Ensembl:ENSMUST00000155676 Ensembl:ENSMUST00000178691 GeneID:27643
KEGG:mmu:27643 CTD:27643 HOGENOM:HOG000185746 InParanoid:P21126
NextBio:305854 Bgee:P21126 CleanEx:MM_UBL4 Genevestigator:P21126
GermOnline:ENSMUSG00000015290 Uniprot:P21126
Length = 157
Score = 140 (54.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 28/73 (38%), Positives = 47/73 (64%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G + C L +++ L+S +K + + L+VPV +QRL +KGK L DE L DY
Sbjct: 1 MQLTVKALQG-RECSLQVAEDELVSTLKHLVSDKLNVPVRQQRLLFKGKALADEKRLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ N + L++K
Sbjct: 60 NIGPNSKLNLVVK 72
>RGD|1563983 [details] [associations]
symbol:Ubl4a "ubiquitin-like 4A" species:10116 "Rattus
norvegicus" [GO:0005829 "cytosol" evidence=ISO;ISS] [GO:0006810
"transport" evidence=IEA] [GO:0071816 "tail-anchored membrane
protein insertion into ER membrane" evidence=ISO;ISS] [GO:0071818
"BAT3 complex" evidence=ISO;ISS] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 RGD:1563983 Prosite:PS00299 GO:GO:0006810
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0071818 GO:GO:0071816
InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348 EMBL:CH474099
GeneTree:ENSGT00700000104456 HOVERGEN:HBG072205 CTD:8266
HOGENOM:HOG000006827 OrthoDB:EOG42JNST OMA:MEKGFSK eggNOG:NOG265285
EMBL:BC166513 IPI:IPI00205128 RefSeq:NP_001099816.1 UniGene:Rn.1138
ProteinModelPortal:B2GV38 SMR:B2GV38 Ensembl:ENSRNOT00000056313
GeneID:293864 KEGG:rno:293864 NextBio:637177 Genevestigator:B2GV38
Uniprot:B2GV38
Length = 157
Score = 140 (54.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 28/73 (38%), Positives = 47/73 (64%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G + C L +++ L+S +K + + L+VPV +QRL +KGK L DE L DY
Sbjct: 1 MQLTVKALQG-RECSLQVAEDELVSTLKHLVSDKLNVPVRQQRLLFKGKALADEKRLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ N + L++K
Sbjct: 60 NIGPNSKLNLVVK 72
>ASPGD|ASPL0000072359 [details] [associations]
symbol:ubi1 species:162425 "Emericella nidulans"
[GO:0031386 "protein tag" evidence=IEA;ISA] [GO:0003735 "structural
constituent of ribosome" evidence=ISA] [GO:0000028 "ribosomal small
subunit assembly" evidence=IEA] [GO:0002109 "maturation of SSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000626 InterPro:IPR002906
Pfam:PF00240 Pfam:PF01599 SMART:SM00213 Prosite:PS00299
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:BN001303
InterPro:IPR019955 PROSITE:PS50053 EMBL:AACD01000084
InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348 KO:K02977
OMA:KKVYTTP HOGENOM:HOG000233943 PIR:S62680 RefSeq:XP_662476.1
ProteinModelPortal:G5EB17 SMR:G5EB17 EnsemblFungi:CADANIAT00005533
GeneID:2872673 KEGG:ani:AN4872.2 Uniprot:G5EB17
Length = 154
Score = 123 (48.4 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 25/73 (34%), Positives = 43/73 (58%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++KT+I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
Score = 39 (18.8 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 641 KKSKQVYTLPSSVLEHINNDT 661
K+ K+VYT P + +H T
Sbjct: 79 KRKKKVYTTPKKI-KHKRKKT 98
Score = 37 (18.1 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 365 KRDTSEVIAPGQKLKDSKKKARMA 388
K+ +V +K+K +KK ++A
Sbjct: 78 KKRKKKVYTTPKKIKHKRKKTKLA 101
>TAIR|locus:2014440 [details] [associations]
symbol:AT1G53930 "AT1G53930" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0006464 "cellular protein modification
process" evidence=ISS] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 Prosite:PS00299 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC006577 InterPro:IPR019955
PROSITE:PS50053 HSSP:Q862M4 InterPro:IPR019954 eggNOG:COG5272
InterPro:IPR019956 PRINTS:PR00348 HOGENOM:HOG000233942 KO:K08770
EMBL:DQ056497 IPI:IPI00546652 PIR:F96579 RefSeq:NP_175796.1
UniGene:At.62377 ProteinModelPortal:Q9SYE9 SMR:Q9SYE9 PaxDb:Q9SYE9
PRIDE:Q9SYE9 EnsemblPlants:AT1G53930.1 GeneID:841831
KEGG:ath:AT1G53930 TAIR:At1g53930 InParanoid:Q9SYE9 OMA:MINLEVD
PhylomeDB:Q9SYE9 ProtClustDB:CLSN2914531 Genevestigator:Q9SYE9
Uniprot:Q9SYE9
Length = 158
Score = 138 (53.6 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M++ I++L G + VL + I ++K +I++ +PVD+QRL +KGKQLED L DY
Sbjct: 86 MFIFIKTLTG-RRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADY 144
Query: 61 NVNLNDVIQLMIK 73
N+ ND I +IK
Sbjct: 145 NIQ-NDSILHLIK 156
>TAIR|locus:2195945 [details] [associations]
symbol:AT1G77250 "AT1G77250" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 EMBL:BT025330
IPI:IPI00544228 RefSeq:NP_177849.2 UniGene:At.50042
ProteinModelPortal:Q1JPM3 SMR:Q1JPM3 PaxDb:Q1JPM3 PRIDE:Q1JPM3
EnsemblPlants:AT1G77250.1 GeneID:844061 KEGG:ath:AT1G77250
TAIR:At1g77250 eggNOG:NOG147697 HOGENOM:HOG000090483
InParanoid:Q1JPM3 OMA:CQHAFLN PhylomeDB:Q1JPM3
Genevestigator:Q1JPM3 Uniprot:Q1JPM3
Length = 522
Score = 159 (61.0 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 313 HCKDCGCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCK 365
+C C C C DK+++C+ C YHI+C++PP ESVP + EWFC +CK
Sbjct: 399 YCSSCLCRNCLTDKDDDKIVLCDGCDDAYHIYCMRPPCESVP-NGEWFCTACK 450
>SGD|S000004157 [details] [associations]
symbol:RPS31 "Fusion protein cleaved to yield ribosomal
protein S31 and ubiquitin" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0000028 "ribosomal
small subunit assembly" evidence=IMP] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;IC] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=IDA] [GO:0031386 "protein tag"
evidence=IMP] [GO:0042254 "ribosome biogenesis" evidence=IMP]
[GO:0002181 "cytoplasmic translation" evidence=IC] [GO:0002109
"maturation of SSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, LSU-rRNA,5S)" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000626 InterPro:IPR002906
Pfam:PF00240 Pfam:PF01599 SMART:SM00213 SGD:S000004157
Prosite:PS00299 GO:GO:0005634 GO:GO:0046872 GO:GO:0006281
EMBL:BK006945 GO:GO:0003735 GO:GO:0002181 InterPro:IPR019955
PROSITE:PS50053 EMBL:U17246 GO:GO:0000028 GO:GO:0031386
InterPro:IPR019954 eggNOG:COG5272 GO:GO:0022627 PDB:3U5C PDB:3U5G
PDBsum:3U5C PDBsum:3U5G InterPro:IPR019956 PRINTS:PR00348 KO:K02977
OMA:KKVYTTP SWISS-2DPAGE:P61864 Genevestigator:P61864
GermOnline:YIL148W GermOnline:YKR094C GermOnline:YLL039C
GermOnline:YLR167W HOGENOM:HOG000224977
GeneTree:ENSGT00550000074763 OrthoDB:EOG4F21CP EMBL:X05730
PIR:C29456 RefSeq:NP_013268.1 ProteinModelPortal:P05759 SMR:P05759
DIP:DIP-6389N IntAct:P05759 MINT:MINT-396408 STRING:P05759
PaxDb:P05759 PRIDE:P05759 EnsemblFungi:YLR167W GeneID:850864
KEGG:sce:YLR167W NextBio:967191 ArrayExpress:P05759 GO:GO:0002109
Uniprot:P05759
Length = 152
Score = 119 (46.9 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K++I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
Score = 38 (18.4 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 641 KKSKQVYTLPSSV 653
K+ K+VYT P +
Sbjct: 79 KRKKKVYTTPKKI 91
>RGD|708360 [details] [associations]
symbol:Phrf1 "PHD and ring finger domains 1" species:10116
"Rattus norvegicus" [GO:0006366 "transcription from RNA polymerase
II promoter" evidence=IMP] [GO:0006397 "mRNA processing"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IMP]
[GO:0070063 "RNA polymerase binding" evidence=IPI]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 RGD:708360 Prosite:PS00518
GO:GO:0019904 GO:GO:0046872 GO:GO:0008270 GO:GO:0006397
GO:GO:0006366 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AC118351 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM OrthoDB:EOG4MSD0F
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 EMBL:U49057
IPI:IPI00211009 IPI:IPI00915115 PIR:T31422 RefSeq:NP_620793.1
UniGene:Rn.10530 ProteinModelPortal:Q63625 STRING:Q63625
PRIDE:Q63625 Ensembl:ENSRNOT00000023376 Ensembl:ENSRNOT00000051755
GeneID:245925 KEGG:rno:245925 UCSC:RGD:708360 InParanoid:Q63625
NextBio:623186 ArrayExpress:Q63625 Genevestigator:Q63625
Uniprot:Q63625
Length = 1685
Score = 163 (62.4 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 41/120 (34%), Positives = 58/120 (48%)
Query: 294 KTLRQIVPECT-TCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLES 352
K L++I E T C D E + C +C D+L++C+ C YH+ CL PPL+
Sbjct: 165 KILKKIPVENTRACEDEEAEEEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQE 224
Query: 353 VPEDDEWFCPSCKR---DTSEVIAPGQKLKDSKKKARMASTNSKSTRDWGKGMACVGRTK 409
VP D EWFCP C D + AP + S A + T S+ G+ A + RT+
Sbjct: 225 VPVD-EWFCPECAVPGVDPTHDAAPVSDEEVSLLLADVVPTTSRLRPRVGRTRA-IARTR 282
>UNIPROTKB|Q63625 [details] [associations]
symbol:Phrf1 "PHD and RING finger domain-containing protein
1" species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 RGD:708360
Prosite:PS00518 GO:GO:0019904 GO:GO:0046872 GO:GO:0008270
GO:GO:0006397 GO:GO:0006366 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AC118351 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM OrthoDB:EOG4MSD0F
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 EMBL:U49057
IPI:IPI00211009 IPI:IPI00915115 PIR:T31422 RefSeq:NP_620793.1
UniGene:Rn.10530 ProteinModelPortal:Q63625 STRING:Q63625
PRIDE:Q63625 Ensembl:ENSRNOT00000023376 Ensembl:ENSRNOT00000051755
GeneID:245925 KEGG:rno:245925 UCSC:RGD:708360 InParanoid:Q63625
NextBio:623186 ArrayExpress:Q63625 Genevestigator:Q63625
Uniprot:Q63625
Length = 1685
Score = 163 (62.4 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 41/120 (34%), Positives = 58/120 (48%)
Query: 294 KTLRQIVPECT-TCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLES 352
K L++I E T C D E + C +C D+L++C+ C YH+ CL PPL+
Sbjct: 165 KILKKIPVENTRACEDEEAEEEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQE 224
Query: 353 VPEDDEWFCPSCKR---DTSEVIAPGQKLKDSKKKARMASTNSKSTRDWGKGMACVGRTK 409
VP D EWFCP C D + AP + S A + T S+ G+ A + RT+
Sbjct: 225 VPVD-EWFCPECAVPGVDPTHDAAPVSDEEVSLLLADVVPTTSRLRPRVGRTRA-IARTR 282
>UNIPROTKB|C1BHN7 [details] [associations]
symbol:ubl4ab "Ubiquitin-like protein 4A-B" species:8022
"Oncorhynchus mykiss" [GO:0005829 "cytosol" evidence=ISS]
[GO:0071816 "tail-anchored membrane protein insertion into ER
membrane" evidence=ISS] [GO:0071818 "BAT3 complex" evidence=ISS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0006810 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0071818
GO:GO:0071816 InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348
EMBL:BT073633 EMBL:BT074116 ProteinModelPortal:C1BHN7
Uniprot:C1BHN7
Length = 151
Score = 133 (51.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 28/91 (30%), Positives = 53/91 (58%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + I+ L G K C + +++ +S +K + L++P ++QRL YKGK L DEY L DY
Sbjct: 1 MILTIKPLKG-KECNVQVTEDEKVSMVKELVSERLNIPANQQRLLYKGKALADEYRLSDY 59
Query: 61 NVNLNDVIQLMIKADIDKNYQSSESSSKENI 91
++ + L+++ +++ +S SS+ +
Sbjct: 60 SIGPEAKLNLVVRPAGERSGMASSSSAVSGV 90
>UNIPROTKB|B2KIK3 [details] [associations]
symbol:UBL4A "Ubiquitin-like protein 4A" species:59479
"Rhinolophus ferrumequinum" [GO:0005829 "cytosol" evidence=ISS]
[GO:0071816 "tail-anchored membrane protein insertion into ER
membrane" evidence=ISS] [GO:0071818 "BAT3 complex" evidence=ISS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0006810 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0071818
GO:GO:0071816 InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348
HOVERGEN:HBG072205 EMBL:DP000725 ProteinModelPortal:B2KIK3
Uniprot:B2KIK3
Length = 160
Score = 130 (50.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G + C L +S+ L+S +K + L+VPV +QRL +KGK L D L DY
Sbjct: 1 MQLTVKALQG-RECSLQVSEDELVSTLKHVVSEKLNVPVRQQRLLFKGKALADGKRLSDY 59
Query: 61 NVNLNDVIQLMIK 73
++ N + L++K
Sbjct: 60 SIGPNSKLNLVVK 72
>UNIPROTKB|B5X9S9 [details] [associations]
symbol:ubl4ab "Ubiquitin-like protein 4A-B" species:8030
"Salmo salar" [GO:0005829 "cytosol" evidence=ISS] [GO:0071816
"tail-anchored membrane protein insertion into ER membrane"
evidence=ISS] [GO:0071818 "BAT3 complex" evidence=ISS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0006810 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0071818
GO:GO:0071816 InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348
HOVERGEN:HBG072205 EMBL:BT047798 EMBL:BT049228
ProteinModelPortal:B5X9S9 Uniprot:B5X9S9
Length = 151
Score = 129 (50.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 27/91 (29%), Positives = 53/91 (58%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + I+ L G K C + +++ +S +K + L++P ++QRL YKGK L DE+ L DY
Sbjct: 1 MILTIKPLQG-KECNVQVTEDEKVSMVKELVSERLNIPANQQRLLYKGKALADEHRLSDY 59
Query: 61 NVNLNDVIQLMIKADIDKNYQSSESSSKENI 91
++ + L+++ +++ +S SS+ +
Sbjct: 60 SIGPEAKLNLVVRPAGERSGMASSSSAVSGV 90
>WB|WBGene00016200 [details] [associations]
symbol:dpff-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 EMBL:FO080703 InterPro:IPR025750 Pfam:PF14051
eggNOG:NOG271547 HOGENOM:HOG000217918 GeneTree:ENSGT00530000063194
PIR:F88469 RefSeq:NP_498281.2 ProteinModelPortal:Q09477 SMR:Q09477
IntAct:Q09477 MINT:MINT-1048693 STRING:Q09477 PaxDb:Q09477
PRIDE:Q09477 EnsemblMetazoa:C28H8.9a GeneID:175832
KEGG:cel:CELE_C28H8.9 CTD:175832 WormBase:C28H8.9a
InParanoid:Q09477 OMA:TQIKEEY NextBio:889856 ArrayExpress:Q09477
Uniprot:Q09477
Length = 372
Score = 148 (57.2 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 31/86 (36%), Positives = 44/86 (51%)
Query: 301 PECTTCNDVETK-------HCKDC-GCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLES 352
P C N TK C +C C+IC + DKL+ C++C YH++CL P LE
Sbjct: 288 PSCLNFNQNVTKIIKRSGWQCLECKSCTICGTSENDDKLLFCDDCDRGYHLYCLTPALEK 347
Query: 353 VPEDDEWFCPSCKRDTSE-VIAPGQK 377
P DDE+ C C+ + + AP +K
Sbjct: 348 AP-DDEYSCRLCQVEFGDKASAPAKK 372
>UNIPROTKB|B0KWT6 [details] [associations]
symbol:UBL4A "Ubiquitin-like protein 4A" species:9483
"Callithrix jacchus" [GO:0005829 "cytosol" evidence=ISS]
[GO:0071816 "tail-anchored membrane protein insertion into ER
membrane" evidence=ISS] [GO:0071818 "BAT3 complex" evidence=ISS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0006810 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0071818
GO:GO:0071816 InterPro:IPR019954 EMBL:DP000587 InterPro:IPR019956
PRINTS:PR00348 GeneTree:ENSGT00700000104456 HOVERGEN:HBG072205
RefSeq:XP_002763467.1 ProteinModelPortal:B0KWT6 SMR:B0KWT6
Ensembl:ENSCJAT00000058031 GeneID:100387252 CTD:8266
HOGENOM:HOG000006827 OrthoDB:EOG42JNST Uniprot:B0KWT6
Length = 157
Score = 127 (49.8 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 26/73 (35%), Positives = 45/73 (61%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G ++C L + + L+S +K + L+VPV +QRL +KGK L D L DY
Sbjct: 1 MQLTVKALQG-RDCSLQVPEDELVSTLKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDY 59
Query: 61 NVNLNDVIQLMIK 73
++ N + L++K
Sbjct: 60 SIGPNSKLNLVVK 72
>TAIR|locus:2030953 [details] [associations]
symbol:SUVH7 "SU(VAR)3-9 homolog 7" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR003105 InterPro:IPR007728 InterPro:IPR017956
InterPro:IPR025794 Pfam:PF02182 Pfam:PF05033 PROSITE:PS50280
PROSITE:PS50867 PROSITE:PS51015 SMART:SM00317 SMART:SM00384
SMART:SM00466 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0000775 GO:GO:0003677 GO:GO:0008270 EMBL:AC034106
GO:GO:0018024 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
KO:K11420 eggNOG:COG3440 Gene3D:2.30.280.10 HOGENOM:HOG000238382
EMBL:AF344450 IPI:IPI00542064 PIR:G86312 RefSeq:NP_564036.1
UniGene:At.15818 ProteinModelPortal:Q9C5P1 SMR:Q9C5P1 PaxDb:Q9C5P1
PRIDE:Q9C5P1 EnsemblPlants:AT1G17770.1 GeneID:838355
KEGG:ath:AT1G17770 TAIR:At1g17770 InParanoid:Q9C5P1 OMA:QVSEFIN
PhylomeDB:Q9C5P1 ProtClustDB:CLSN2687844 Genevestigator:Q9C5P1
GermOnline:AT1G17770 Uniprot:Q9C5P1
Length = 693
Score = 109 (43.4 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 25/80 (31%), Positives = 40/80 (50%)
Query: 420 GPIPGIEVGQSYLYRFQASEAGVHRPHVSGIH-------GREDVGAFSLVLSGGYEDDVD 472
G +PGI VG + Y + G+H+ + GI E A +V +G Y+ + +
Sbjct: 227 GAVPGIHVGDIFYYWGEMCLVGLHKSNYGGIDFFTAAESAVEGHAAMCVVTAGQYDGETE 286
Query: 473 DGDSFLYTGSGGRDLSGNKR 492
D+ +Y+G GG D+ GN R
Sbjct: 287 GLDTLIYSGQGGTDVYGNAR 306
Score = 93 (37.8 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 35/92 (38%), Positives = 43/92 (46%)
Query: 520 KRGNEAVDWK--KGKPVRVMRNFHGAKHSKYAPKEGNR----YDGIYKVVKYYPVKGSSD 573
K GN A++ KG VRV+R G H P E N+ YDG+Y V K++ V G S
Sbjct: 311 KGGNLALEASVSKGNDVRVVR---GVIH----PHENNQKIYIYDGMYLVSKFWTVTGKSG 363
Query: 574 FIVWRFHLQRDDEAP---APWTEEGKKRIKDL 602
F +RF L R P A W R DL
Sbjct: 364 FKEFRFKLVRKPNQPPAYAIWKTVENLRNHDL 395
>UNIPROTKB|P11441 [details] [associations]
symbol:UBL4A "Ubiquitin-like protein 4A" species:9606 "Homo
sapiens" [GO:0006810 "transport" evidence=IEA] [GO:0071816
"tail-anchored membrane protein insertion into ER membrane"
evidence=IMP] [GO:0071818 "BAT3 complex" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006464 "cellular protein modification
process" evidence=TAS] [GO:0019787 "small conjugating protein
ligase activity" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
Prosite:PS00299 GO:GO:0006810 GO:GO:0006464 InterPro:IPR019955
PROSITE:PS50053 GO:GO:0019787 EMBL:CH471172 GO:GO:0071818
GO:GO:0071816 InterPro:IPR019954 EMBL:L44140 EMBL:BX664739
InterPro:IPR019956 PRINTS:PR00348 HOVERGEN:HBG072205 CTD:8266
HOGENOM:HOG000006827 OrthoDB:EOG42JNST OMA:MEKGFSK EMBL:J03589
EMBL:BC043346 EMBL:BC053589 IPI:IPI00005658 PIR:A31084
RefSeq:NP_055050.1 UniGene:Hs.76480 PDB:2DZI PDBsum:2DZI
ProteinModelPortal:P11441 SMR:P11441 IntAct:P11441
MINT:MINT-1147351 STRING:P11441 PhosphoSite:P11441 DMDM:136662
PaxDb:P11441 PRIDE:P11441 DNASU:8266 Ensembl:ENST00000369660
GeneID:8266 KEGG:hsa:8266 UCSC:uc004flo.3 GeneCards:GC0XM153712
HGNC:HGNC:12505 HPA:HPA003617 MIM:312070 neXtProt:NX_P11441
PharmGKB:PA37152 eggNOG:NOG265285 PhylomeDB:P11441
EvolutionaryTrace:P11441 GenomeRNAi:8266 NextBio:31028
ArrayExpress:P11441 Bgee:P11441 CleanEx:HS_UBL4A
Genevestigator:P11441 GermOnline:ENSG00000102178 Uniprot:P11441
Length = 157
Score = 126 (49.4 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G + C L + + L+S +K + L+VPV +QRL +KGK L D L DY
Sbjct: 1 MQLTVKALQG-RECSLQVPEDELVSTLKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDY 59
Query: 61 NVNLNDVIQLMIK 73
++ N + L++K
Sbjct: 60 SIGPNSKLNLVVK 72
>UNIPROTKB|B1MTV8 [details] [associations]
symbol:UBL4A "Ubiquitin-like protein 4A" species:9523
"Callicebus moloch" [GO:0005829 "cytosol" evidence=ISS] [GO:0071816
"tail-anchored membrane protein insertion into ER membrane"
evidence=ISS] [GO:0071818 "BAT3 complex" evidence=ISS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0006810 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0071818
GO:GO:0071816 InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348
HOVERGEN:HBG072205 EMBL:DP000647 ProteinModelPortal:B1MTV8
SMR:B1MTV8 Uniprot:B1MTV8
Length = 157
Score = 126 (49.4 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G + C L + + L+S +K + L+VPV +QRL +KGK L D L DY
Sbjct: 1 MQLTVKALQG-RECSLQVPEDELVSTLKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDY 59
Query: 61 NVNLNDVIQLMIK 73
++ N + L++K
Sbjct: 60 SIGPNSKLNLVVK 72
>UNIPROTKB|Q5R4T1 [details] [associations]
symbol:UBL4A "Ubiquitin-like protein 4A" species:9601
"Pongo abelii" [GO:0005829 "cytosol" evidence=ISS] [GO:0071816
"tail-anchored membrane protein insertion into ER membrane"
evidence=ISS] [GO:0071818 "BAT3 complex" evidence=ISS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0006810 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0071818
GO:GO:0071816 InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348
HOVERGEN:HBG072205 CTD:8266 HOGENOM:HOG000006827 EMBL:CR861163
RefSeq:NP_001126901.1 UniGene:Pab.18523 ProteinModelPortal:Q5R4T1
SMR:Q5R4T1 GeneID:100173917 KEGG:pon:100173917 Uniprot:Q5R4T1
Length = 157
Score = 126 (49.4 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G + C L + + L+S +K + L+VPV +QRL +KGK L D L DY
Sbjct: 1 MQLTVKALQG-RECSLQVPEDELVSTLKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDY 59
Query: 61 NVNLNDVIQLMIK 73
++ N + L++K
Sbjct: 60 SIGPNSKLNLVVK 72
>ZFIN|ZDB-GENE-040426-1089 [details] [associations]
symbol:zgc:56596 "zgc:56596" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0071816
"tail-anchored membrane protein insertion into ER membrane"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0071818 "BAT3
complex" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
Prosite:PS00299 ZFIN:ZDB-GENE-040426-1089 GO:GO:0006810
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0071818 GO:GO:0071816
InterPro:IPR019954 eggNOG:COG5272 InterPro:IPR019956 PRINTS:PR00348
HSSP:Q15843 GeneTree:ENSGT00700000104456 HOVERGEN:HBG072205
HOGENOM:HOG000006827 OrthoDB:EOG42JNST EMBL:CR855300 EMBL:BC049498
IPI:IPI00496295 RefSeq:NP_956594.1 UniGene:Dr.15182
ProteinModelPortal:Q7ZWB2 SMR:Q7ZWB2 STRING:Q7ZWB2 PRIDE:Q7ZWB2
Ensembl:ENSDART00000013870 GeneID:393270 KEGG:dre:393270
InParanoid:Q7ZWB2 OMA:MEKGFSK NextBio:20814328 Bgee:Q7ZWB2
Uniprot:Q7ZWB2
Length = 157
Score = 126 (49.4 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 26/90 (28%), Positives = 51/90 (56%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + ++ L G K C + +++ +S +K + L++P +QRL YKGK L DE+ L DY
Sbjct: 1 MILTVKPLQG-KECNVQVTENEKVSTVKELVSERLNIPASQQRLLYKGKALADEHRLSDY 59
Query: 61 NVNLNDVIQLMIKADIDKNYQSSESSSKEN 90
++ + L+++ +++ + +SS N
Sbjct: 60 SIGPEAKLNLVVRPAGERSSGAVGTSSANN 89
>UNIPROTKB|C3KHF2 [details] [associations]
symbol:ubl4a "Ubiquitin-like protein 4A" species:229290
"Anoplopoma fimbria" [GO:0005829 "cytosol" evidence=ISS]
[GO:0071816 "tail-anchored membrane protein insertion into ER
membrane" evidence=ISS] [GO:0071818 "BAT3 complex" evidence=ISS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0006810 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0071818
GO:GO:0071816 InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348
EMBL:BT082367 ProteinModelPortal:C3KHF2 Uniprot:C3KHF2
Length = 156
Score = 125 (49.1 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 26/90 (28%), Positives = 51/90 (56%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + ++ L G K C + +++ +S +K + L++P ++QRL YKGK L DE+ L DY
Sbjct: 1 MILTVKPLQG-KECSVQVTEDEKVSTVKELVSERLNIPANQQRLLYKGKALSDEHRLSDY 59
Query: 61 NVNLNDVIQLMIKADIDKNYQSSESSSKEN 90
++ + L+I+ ++ S ++S +
Sbjct: 60 SIGPEAKLNLVIRPVGERTGASGTAASSSS 89
>TAIR|locus:2140827 [details] [associations]
symbol:SUVH9 "SU(VAR)3-9 homolog 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0009294 "DNA mediated
transformation" evidence=IMP] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR003105 InterPro:IPR003606 InterPro:IPR007728
InterPro:IPR025794 Pfam:PF02182 Pfam:PF05033 PROSITE:PS50280
PROSITE:PS50867 PROSITE:PS51015 SMART:SM00317 SMART:SM00466
SMART:SM00468 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0000775 GO:GO:0008270 EMBL:AL049656 EMBL:AL161536
GO:GO:0009294 GO:GO:0018024 KO:K11420 eggNOG:COG3440
Gene3D:2.30.280.10 HOGENOM:HOG000238382 ProtClustDB:CLSN2685938
EMBL:AF344452 IPI:IPI00529277 PIR:T06648 RefSeq:NP_001031625.1
RefSeq:NP_193082.1 UniGene:At.3118 ProteinModelPortal:Q9T0G7
SMR:Q9T0G7 STRING:Q9T0G7 PRIDE:Q9T0G7 EnsemblPlants:AT4G13460.1
EnsemblPlants:AT4G13460.2 GeneID:826978 KEGG:ath:AT4G13460
TAIR:At4g13460 InParanoid:Q9T0G7 OMA:EGQAEMG PhylomeDB:Q9T0G7
Genevestigator:Q9T0G7 GermOnline:AT4G13460 Uniprot:Q9T0G7
Length = 650
Score = 149 (57.5 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 40/100 (40%), Positives = 54/100 (54%)
Query: 420 GPIPGIEVGQSYLYRFQASEAGVHRPHVSGIH---GR-EDVG---AFSLVLSGGYEDDVD 472
G IPG++VG + +RF+ G+H SGI G G A S+++SGGYEDD D
Sbjct: 205 GSIPGVQVGDIFFFRFELCVMGLHGHPQSGIDFLTGSLSSNGEPIATSVIVSGGYEDDDD 264
Query: 473 DGDSFLYTGSGGRDLSGNKRTSVQSFDQTLTRMNKALARN 512
GD +YTG GG+D G Q+ Q L N A+ R+
Sbjct: 265 QGDVIMYTGQGGQDRLGR-----QAEHQRLEGGNLAMERS 299
>UNIPROTKB|I3LCE6 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071884 "vitamin D receptor activator activity"
evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA] [GO:0070577
"histone acetyl-lysine binding" evidence=IEA] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=IEA]
[GO:0043596 "nuclear replication fork" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0042809
"vitamin D receptor binding" evidence=IEA] [GO:0035173 "histone
kinase activity" evidence=IEA] [GO:0034725 "DNA
replication-dependent nucleosome disassembly" evidence=IEA]
[GO:0032947 "protein complex scaffold" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0003007 GO:GO:0008270 GO:GO:0003682 GO:GO:0004713
GO:GO:0043596 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006302 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005721 GO:GO:0000793 GO:GO:0048096
GO:GO:0043044 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 OMA:CNKAFHL
GO:GO:0071778 GO:GO:0035173 GO:GO:0071884 GO:GO:0034725
EMBL:FP312931 Ensembl:ENSSSCT00000030732 Uniprot:I3LCE6
Length = 1483
Score = 153 (58.9 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTSEVIAPGQKL 378
C +C K DKLI+C+EC +H++CL+P L +VP D EW CP+C+ T+ + G+
Sbjct: 1187 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYAVP-DGEWQCPACQPATARRNSRGRNY 1245
Query: 379 KDSKKKARMASTNSKSTRDWGK 400
+ S+ + G+
Sbjct: 1246 TEESSSEDSEDDESEEEEEEGE 1267
>ZFIN|ZDB-GENE-120215-90 [details] [associations]
symbol:si:ch73-39g20.1 "si:ch73-39g20.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 ZFIN:ZDB-GENE-120215-90 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
GeneTree:ENSGT00530000064411 EMBL:CU570791 IPI:IPI00897032
Ensembl:ENSDART00000112648 Bgee:E7FCR1 Uniprot:E7FCR1
Length = 1263
Score = 152 (58.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 36/110 (32%), Positives = 54/110 (49%)
Query: 257 RLENCKIKFVKELYKIESPKLLAERTAEDEDHMS-TEPKTLRQIVPECTTCNDVETKHCK 315
R++NCK K +E ++ + +E DH S E + + PE D CK
Sbjct: 725 RMKNCKSKVAQEEEAVDDKAENDDNKSEKGDHNSEAESEQSNEFPPE-----DA----CK 775
Query: 316 DCGCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCK 365
CG + P+ +++C+ C YH CL+PPL +P D EWFCP C+
Sbjct: 776 HCGLA-----NHPELILLCDLCDSGYHTACLRPPLMIIP-DGEWFCPPCQ 819
>UNIPROTKB|I3LUY7 [details] [associations]
symbol:I3LUY7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051301 "cell division" evidence=IEA] [GO:0016881
"acid-amino acid ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017335 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00400000022349 PANTHER:PTHR15067:SF3 EMBL:CU855572
Ensembl:ENSSSCT00000029099 OMA:VEMKEHR Uniprot:I3LUY7
Length = 135
Score = 123 (48.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 32/92 (34%), Positives = 50/92 (54%)
Query: 676 EGQKE-VLEH----IQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCP 730
+ QKE VL H ++ + CIIC E + +TL+C H+FC C+ K + + CP
Sbjct: 33 QAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKVE----CP 88
Query: 731 YCRKEMNKSCLETHSNDALQSILSTLFPGYSS 762
CRK++ KS +THS L + ++ + SS
Sbjct: 89 ICRKDI-KS--KTHSL-VLDNCINKMVDNLSS 116
>UNIPROTKB|P79781 [details] [associations]
symbol:RPS27A "Ubiquitin-40S ribosomal protein S27a"
species:9031 "Gallus gallus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0002218 "activation of innate immune
response" evidence=TAS] [GO:0002224 "toll-like receptor signaling
pathway" evidence=TAS] [GO:0002755 "MyD88-dependent toll-like
receptor signaling pathway" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS] [GO:0007250
"activation of NF-kappaB-inducing kinase activity" evidence=TAS]
[GO:0019985 "translesion synthesis" evidence=TAS] [GO:0034134
"toll-like receptor 2 signaling pathway" evidence=TAS] [GO:0034138
"toll-like receptor 3 signaling pathway" evidence=TAS] [GO:0034142
"toll-like receptor 4 signaling pathway" evidence=TAS] [GO:0034146
"toll-like receptor 5 signaling pathway" evidence=TAS] [GO:0034154
"toll-like receptor 7 signaling pathway" evidence=TAS] [GO:0035419
"activation of MAPK activity involved in innate immune response"
evidence=TAS] [GO:0035681 "toll-like receptor 15 signaling pathway"
evidence=TAS] [GO:0035682 "toll-like receptor 21 signaling pathway"
evidence=TAS] InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240
Pfam:PF01599 SMART:SM00213 Prosite:PS00299 GO:GO:0005654
GO:GO:0046872 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0035419 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0007250
GO:GO:0002755 GO:GO:0034134 GO:GO:0034138 GO:GO:0034142
Reactome:REACT_102124 InterPro:IPR019954 eggNOG:COG5272
Reactome:REACT_115612 GO:GO:0019985 Reactome:REACT_147795
GO:GO:0035681 GO:GO:0034146 GO:GO:0035682 GO:GO:0034154
InterPro:IPR019956 PRINTS:PR00348 KO:K02977 CTD:6233
OrthoDB:EOG4PZJ82 EMBL:U67931 IPI:IPI00818312 RefSeq:NP_990284.1
UniGene:Gga.39015 ProteinModelPortal:P79781 STRING:P79781
PRIDE:P79781 GeneID:395796 KEGG:gga:395796 InParanoid:P79781
NextBio:20815864 Uniprot:P79781
Length = 156
Score = 122 (48.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 28/92 (30%), Positives = 50/92 (54%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK--ADIDKNYQSSESSSKEN 90
N+ + L+++ K + S ++ K+N
Sbjct: 60 NIQKESTLHLVLRLRGGAKKRKKKSYTTPKKN 91
>UNIPROTKB|P62992 [details] [associations]
symbol:RPS27A "Ubiquitin-40S ribosomal protein S27a"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000626 InterPro:IPR002906
Pfam:PF00240 Pfam:PF01599 SMART:SM00213 Prosite:PS00299
GO:GO:0005634 GO:GO:0046872 GO:GO:0006412 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0022627 InterPro:IPR019956 PRINTS:PR00348
KO:K02977 OMA:KKVYTTP EMBL:AF058700 EMBL:AB098891 EMBL:BC102491
IPI:IPI00709961 PIR:A28144 RefSeq:NP_777203.1 UniGene:Bt.4286
ProteinModelPortal:P62992 SMR:P62992 STRING:P62992 PRIDE:P62992
Ensembl:ENSBTAT00000033091 GeneID:286839 KEGG:bta:286839 CTD:6233
GeneTree:ENSGT00550000074763 HOVERGEN:HBG079148 InParanoid:P62992
OrthoDB:EOG4PZJ82 NextBio:20806490 ArrayExpress:P62992
Uniprot:P62992
Length = 156
Score = 122 (48.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 28/92 (30%), Positives = 50/92 (54%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK--ADIDKNYQSSESSSKEN 90
N+ + L+++ K + S ++ K+N
Sbjct: 60 NIQKESTLHLVLRLRGGAKKRKKKSYTTPKKN 91
>UNIPROTKB|F1PEZ4 [details] [associations]
symbol:RPS27A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599
SMART:SM00213 Prosite:PS00299 GO:GO:0006412 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954 GO:GO:0022627
InterPro:IPR019956 PRINTS:PR00348 KO:K02977 OMA:KKVYTTP CTD:6233
GeneTree:ENSGT00550000074763 EMBL:AAEX03007531
RefSeq:NP_001239157.1 ProteinModelPortal:F1PEZ4
Ensembl:ENSCAFT00000036091 GeneID:474599 KEGG:cfa:474599
Uniprot:F1PEZ4
Length = 156
Score = 122 (48.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 28/92 (30%), Positives = 50/92 (54%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK--ADIDKNYQSSESSSKEN 90
N+ + L+++ K + S ++ K+N
Sbjct: 60 NIQKESTLHLVLRLRGGAKKRKKKSYTTPKKN 91
>UNIPROTKB|P62979 [details] [associations]
symbol:RPS27A "Ubiquitin-40S ribosomal protein S27a"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IDA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0015935 "small ribosomal subunit" evidence=IDA]
[GO:0006412 "translation" evidence=IC;TAS] [GO:0000075 "cell cycle
checkpoint" evidence=TAS] [GO:0000080 "G1 phase of mitotic cell
cycle" evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=TAS] [GO:0000187 "activation of MAPK activity"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002224 "toll-like receptor signaling pathway" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0002755 "MyD88-dependent toll-like
receptor signaling pathway" evidence=TAS] [GO:0002756
"MyD88-independent toll-like receptor signaling pathway"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0006413
"translational initiation" evidence=TAS] [GO:0006414 "translational
elongation" evidence=TAS] [GO:0006415 "translational termination"
evidence=TAS] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=TAS] [GO:0006915 "apoptotic
process" evidence=TAS] [GO:0006977 "DNA damage response, signal
transduction by p53 class mediator resulting in cell cycle arrest"
evidence=TAS] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0007179 "transforming growth
factor beta receptor signaling pathway" evidence=TAS] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0007220 "Notch receptor
processing" evidence=TAS] [GO:0007249 "I-kappaB kinase/NF-kappaB
cascade" evidence=TAS] [GO:0007254 "JNK cascade" evidence=TAS]
[GO:0008063 "Toll signaling pathway" evidence=TAS] [GO:0008543
"fibroblast growth factor receptor signaling pathway" evidence=TAS]
[GO:0010008 "endosome membrane" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0016197
"endosomal transport" evidence=TAS] [GO:0019058 "viral infectious
cycle" evidence=TAS] [GO:0019083 "viral transcription"
evidence=TAS] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=TAS] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=TAS]
[GO:0030666 "endocytic vesicle membrane" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0032480 "negative regulation of type I interferon production"
evidence=TAS] [GO:0033554 "cellular response to stress"
evidence=TAS] [GO:0034130 "toll-like receptor 1 signaling pathway"
evidence=TAS] [GO:0034134 "toll-like receptor 2 signaling pathway"
evidence=TAS] [GO:0034138 "toll-like receptor 3 signaling pathway"
evidence=TAS] [GO:0034142 "toll-like receptor 4 signaling pathway"
evidence=TAS] [GO:0035666 "TRIF-dependent toll-like receptor
signaling pathway" evidence=TAS] [GO:0035872 "nucleotide-binding
domain, leucine rich repeat containing receptor signaling pathway"
evidence=TAS] [GO:0042059 "negative regulation of epidermal growth
factor receptor signaling pathway" evidence=TAS] [GO:0042590
"antigen processing and presentation of exogenous peptide antigen
via MHC class I" evidence=TAS] [GO:0042981 "regulation of apoptotic
process" evidence=TAS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=TAS] [GO:0044267 "cellular
protein metabolic process" evidence=TAS] [GO:0045087 "innate immune
response" evidence=TAS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0046788 "egress of virus within host cell" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0050852 "T cell receptor signaling pathway"
evidence=TAS] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=TAS] [GO:0051403
"stress-activated MAPK cascade" evidence=TAS] [GO:0051436 "negative
regulation of ubiquitin-protein ligase activity involved in mitotic
cell cycle" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=TAS] [GO:0070423 "nucleotide-binding
oligomerization domain containing signaling pathway" evidence=TAS]
[GO:0071456 "cellular response to hypoxia" evidence=TAS]
Reactome:REACT_6782 Reactome:REACT_13505 Reactome:REACT_81380
Reactome:REACT_216 Reactome:REACT_578 Reactome:REACT_2001
Reactome:REACT_97910 Reactome:REACT_71 Reactome:REACT_11123
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_17015
InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599
SMART:SM00213 Reactome:REACT_120956 Prosite:PS00299 GO:GO:0005886
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0007173 GO:GO:0008543 GO:GO:0048011
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0000184 GO:GO:0042981
GO:GO:0050852 GO:GO:0007254 GO:GO:0046872 GO:GO:0000082
GO:GO:0006413 GO:GO:0043123 GO:GO:0006281 GO:GO:0045944
GO:GO:0007219 GO:GO:0045087 GO:GO:0000187 GO:GO:0019221
Reactome:REACT_115202 GO:GO:0016197 GO:GO:0010008 GO:GO:0000122
GO:GO:0051436 GO:GO:0003735 GO:GO:0007179 GO:GO:0007220
Reactome:REACT_107772 GO:GO:0051092 InterPro:IPR019955
PROSITE:PS50053 GO:GO:0000216 GO:GO:0000209 GO:GO:0000084
Reactome:REACT_8017 GO:GO:0031145 GO:GO:0051437 GO:GO:0006367
GO:GO:0016044 GO:GO:0042059 GO:GO:0061418 GO:GO:0030512
GO:GO:0002755 GO:GO:0008063 GO:GO:0034130 GO:GO:0034134
GO:GO:0034138 GO:GO:0034142 GO:GO:0035666 GO:GO:0000080
GO:GO:0032480 GO:GO:0007249 InterPro:IPR019954 eggNOG:COG5272
Reactome:REACT_24941 GO:GO:0030666 GO:GO:0070423 Reactome:REACT_383
GO:GO:0006415 GO:GO:0006414 GO:GO:0022627 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0046788 EMBL:AC012358 PDB:3PHD PDBsum:3PHD
GO:GO:0019083 InterPro:IPR019956 PRINTS:PR00348 PDB:3TBL
PDBsum:3TBL PDB:2KHW PDB:2KTF PDB:2L0F PDBsum:2KHW PDBsum:2KTF
PDBsum:2L0F PDB:2KWU PDB:2KWV PDBsum:2KWU PDBsum:2KWV KO:K02977
OMA:KKVYTTP HPA:HPA041344 CTD:6233 HOVERGEN:HBG079148
OrthoDB:EOG4PZJ82 EMBL:X63237 EMBL:S79522 EMBL:BC001392
EMBL:BC066293 EMBL:AB062071 EMBL:M10939 EMBL:AB007163
IPI:IPI00179330 RefSeq:NP_001129064.1 RefSeq:NP_001170884.1
RefSeq:NP_002945.1 UniGene:Hs.311640 UniGene:Hs.546292
UniGene:Hs.708727 PDB:2KOX PDB:2L0T PDB:2XK5 PDB:3AXC PDB:3K9P
PDB:3N30 PDB:3N32 PDB:3NHE PDB:3NOB PDB:3NS8 PDB:3PHW PDBsum:2KOX
PDBsum:2L0T PDBsum:2XK5 PDBsum:3AXC PDBsum:3K9P PDBsum:3N30
PDBsum:3N32 PDBsum:3NHE PDBsum:3NOB PDBsum:3NS8 PDBsum:3PHW
ProteinModelPortal:P62979 SMR:P62979 IntAct:P62979
MINT:MINT-1138719 STRING:P62979 PhosphoSite:P62979 DMDM:302393745
UCD-2DPAGE:P02248 PaxDb:P62979 PRIDE:P62979 DNASU:6233
Ensembl:ENST00000272317 Ensembl:ENST00000402285
Ensembl:ENST00000404735 GeneID:6233 KEGG:hsa:6233 UCSC:uc002ryk.3
GeneCards:GC02P055459 H-InvDB:HIX0161861 HGNC:HGNC:10417
HPA:CAB033319 MIM:191343 neXtProt:NX_P62979 PharmGKB:PA34821
InParanoid:P62979 PhylomeDB:P62979 ChiTaRS:RPS27A
EvolutionaryTrace:P62979 GenomeRNAi:6233 NextBio:24197
ArrayExpress:P62979 Bgee:P62979 CleanEx:HS_RPS27A
Genevestigator:P62979 GermOnline:ENSG00000143947 Uniprot:P62979
Length = 156
Score = 122 (48.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 28/92 (30%), Positives = 50/92 (54%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK--ADIDKNYQSSESSSKEN 90
N+ + L+++ K + S ++ K+N
Sbjct: 60 NIQKESTLHLVLRLRGGAKKRKKKSYTTPKKN 91
>UNIPROTKB|F2Z5U0 [details] [associations]
symbol:RPS27A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599
SMART:SM00213 Prosite:PS00299 GO:GO:0006412 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954 GO:GO:0022627
InterPro:IPR019956 PRINTS:PR00348 KO:K02977 OMA:KKVYTTP
GeneTree:ENSGT00550000074763 EMBL:FP326662 RefSeq:XP_003125184.1
RefSeq:XP_003125185.1 ProteinModelPortal:F2Z5U0 SMR:F2Z5U0
PRIDE:F2Z5U0 Ensembl:ENSSSCT00000026044 GeneID:100514637
KEGG:ssc:100514637 Uniprot:F2Z5U0
Length = 156
Score = 122 (48.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 28/92 (30%), Positives = 50/92 (54%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK--ADIDKNYQSSESSSKEN 90
N+ + L+++ K + S ++ K+N
Sbjct: 60 NIQKESTLHLVLRLRGGAKKRKKKSYTTPKKN 91
>UNIPROTKB|B5XFI8 [details] [associations]
symbol:ubl4aa "Ubiquitin-like protein 4A-A" species:8030
"Salmo salar" [GO:0005829 "cytosol" evidence=ISS] [GO:0071816
"tail-anchored membrane protein insertion into ER membrane"
evidence=ISS] [GO:0071818 "BAT3 complex" evidence=ISS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0006810 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0071818
GO:GO:0071816 InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348
EMBL:BT049807 ProteinModelPortal:B5XFI8 HOVERGEN:HBG072205
Uniprot:B5XFI8
Length = 154
Score = 122 (48.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 25/91 (27%), Positives = 52/91 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + ++ L G K C + +++ +S +K + L++P ++QRL YKGK L DE+ L DY
Sbjct: 1 MILTVKPLQG-KECNVQVTEDEKVSTVKELVSERLNIPANQQRLLYKGKALADEHRLSDY 59
Query: 61 NVNLNDVIQLMIKADIDKNYQSSESSSKENI 91
++ + L+++ +++ + +SS +
Sbjct: 60 SIGPEAKLNLVVRPAGERSGVAGMASSSSAV 90
>MGI|MGI:1925544 [details] [associations]
symbol:Rps27a "ribosomal protein S27A" species:10090 "Mus
musculus" [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0015935 "small ribosomal subunit" evidence=ISO] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000626 InterPro:IPR002906
Pfam:PF00240 Pfam:PF01599 SMART:SM00213 MGI:MGI:1925544
Prosite:PS00299 GO:GO:0005829 GO:GO:0005654 GO:GO:0046872
GO:GO:0006412 Reactome:REACT_115202 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 Reactome:REACT_109335 Reactome:REACT_24972
GO:GO:0022627 InterPro:IPR019956 PRINTS:PR00348 KO:K02977
OMA:KKVYTTP REPRODUCTION-2DPAGE:P62991
GermOnline:ENSMUSG00000008348 GermOnline:ENSMUSG00000019505
GermOnline:ENSMUSG00000020460 GermOnline:ENSMUSG00000044285
GermOnline:ENSMUSG00000058838 GermOnline:ENSMUSG00000061390
GermOnline:ENSMUSG00000063789 CTD:6233 OrthoDB:EOG4PZJ82
EMBL:AK018706 EMBL:BC002108 IPI:IPI00470152 RefSeq:NP_001029037.1
RefSeq:NP_077239.1 UniGene:Mm.180003 UniGene:Mm.458088
ProteinModelPortal:P62983 SMR:P62983 IntAct:P62983 STRING:P62983
PhosphoSite:P62983 PaxDb:P62983 PRIDE:P62983
Ensembl:ENSMUST00000102844 Ensembl:ENSMUST00000102845 GeneID:78294
KEGG:mmu:78294 HOVERGEN:HBG079153 InParanoid:P62983 NextBio:348635
Bgee:P62983 CleanEx:MM_RPS27A Genevestigator:P62991 Uniprot:P62983
Length = 156
Score = 122 (48.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 28/92 (30%), Positives = 50/92 (54%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK--ADIDKNYQSSESSSKEN 90
N+ + L+++ K + S ++ K+N
Sbjct: 60 NIQKESTLHLVLRLRGGAKKRKKKSYTTPKKN 91
>UNIPROTKB|P62982 [details] [associations]
symbol:Rps27a "Ubiquitin-40S ribosomal protein S27a"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240
Pfam:PF01599 SMART:SM00213 RGD:620240 Prosite:PS00299 GO:GO:0005634
GO:GO:0046872 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 InterPro:IPR019956 PRINTS:PR00348 KO:K02977
OMA:KKVYTTP GermOnline:ENSRNOG00000004426
GermOnline:ENSRNOG00000019974 GermOnline:ENSRNOG00000028756
GermOnline:ENSRNOG00000032872 GermOnline:ENSRNOG00000034246
GermOnline:ENSRNOG00000037930 CTD:6233 OrthoDB:EOG4PZJ82
HOVERGEN:HBG079153 EMBL:X81839 IPI:IPI00190240 PIR:I52328
RefSeq:NP_112375.1 RefSeq:XP_003751469.1 RefSeq:XP_003752815.1
UniGene:Rn.106034 ProteinModelPortal:P62982 SMR:P62982
IntAct:P62982 STRING:P62982 PhosphoSite:P62982 PRIDE:P62982
Ensembl:ENSRNOT00000005872 Ensembl:ENSRNOT00000049535
GeneID:100912032 GeneID:81777 KEGG:rno:100912032 KEGG:rno:81777
InParanoid:P62982 NextBio:615609 ArrayExpress:P62982
Genevestigator:P62982 Uniprot:P62982
Length = 156
Score = 122 (48.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 28/92 (30%), Positives = 50/92 (54%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK--ADIDKNYQSSESSSKEN 90
N+ + L+++ K + S ++ K+N
Sbjct: 60 NIQKESTLHLVLRLRGGAKKRKKKSYTTPKKN 91
>CGD|CAL0002668 [details] [associations]
symbol:TRY3 species:5476 "Candida albicans" [GO:0044011
"single-species biofilm formation on inanimate substrate"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0005829 "cytosol"
evidence=IEA] [GO:0010811 "positive regulation of cell-substrate
adhesion" evidence=IMP] [GO:1900189 "positive regulation of cell
adhesion involved in single-species biofilm formation"
evidence=IMP] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
CGD:CAL0002668 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006357 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010811
GO:GO:1900189 GO:GO:0044011 InterPro:IPR017907 EMBL:AACQ01000082
EMBL:AACQ01000081 InterPro:IPR004331 Pfam:PF03105 PROSITE:PS51382
eggNOG:COG5574 RefSeq:XP_715677.1 RefSeq:XP_715733.1
ProteinModelPortal:Q5A1M4 GeneID:3642652 GeneID:3642708
KEGG:cal:CaO19.1971 KEGG:cal:CaO19.9527 Uniprot:Q5A1M4
Length = 494
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 41/134 (30%), Positives = 67/134 (50%)
Query: 630 VSSETLGESKVKKSKQVYT-LPSSVLEHINNDTVHSNVWDEIKALCKEGQKEVLEHIQE- 687
+++E L + K KQ + ++ + I+ND + + +++C Q+ +++ I +
Sbjct: 334 INNEALRKILNKFDKQTSLGIQNTFPQLISNDHIFMSGSSLAQSICYIIQESIIKVIPQL 393
Query: 688 -KFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKSCLETHSN 746
+ C IC + YKPI L C H FC CL K++ D SCP CRKE N SN
Sbjct: 394 DDYSCPICMNIAYKPIRLSCGHLFCVRCL---VKMKQDDKTSCPLCRKE-NAILYADSSN 449
Query: 747 DALQS--ILSTLFP 758
L+S ++ FP
Sbjct: 450 LDLESMELMKKYFP 463
>UNIPROTKB|Q5A1M4 [details] [associations]
symbol:CaO19.1971 "Potential zinc RING finger protein"
species:237561 "Candida albicans SC5314" [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0010811 "positive regulation of cell-substrate adhesion"
evidence=IMP] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] [GO:1900189 "positive regulation
of cell adhesion involved in single-species biofilm formation"
evidence=IMP] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
CGD:CAL0002668 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006357 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010811
GO:GO:1900189 GO:GO:0044011 InterPro:IPR017907 EMBL:AACQ01000082
EMBL:AACQ01000081 InterPro:IPR004331 Pfam:PF03105 PROSITE:PS51382
eggNOG:COG5574 RefSeq:XP_715677.1 RefSeq:XP_715733.1
ProteinModelPortal:Q5A1M4 GeneID:3642652 GeneID:3642708
KEGG:cal:CaO19.1971 KEGG:cal:CaO19.9527 Uniprot:Q5A1M4
Length = 494
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 41/134 (30%), Positives = 67/134 (50%)
Query: 630 VSSETLGESKVKKSKQVYT-LPSSVLEHINNDTVHSNVWDEIKALCKEGQKEVLEHIQE- 687
+++E L + K KQ + ++ + I+ND + + +++C Q+ +++ I +
Sbjct: 334 INNEALRKILNKFDKQTSLGIQNTFPQLISNDHIFMSGSSLAQSICYIIQESIIKVIPQL 393
Query: 688 -KFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKSCLETHSN 746
+ C IC + YKPI L C H FC CL K++ D SCP CRKE N SN
Sbjct: 394 DDYSCPICMNIAYKPIRLSCGHLFCVRCL---VKMKQDDKTSCPLCRKE-NAILYADSSN 449
Query: 747 DALQS--ILSTLFP 758
L+S ++ FP
Sbjct: 450 LDLESMELMKKYFP 463
>ZFIN|ZDB-GENE-030131-624 [details] [associations]
symbol:phrf1 "PHD and ring finger domains 1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518
ZFIN:ZDB-GENE-030131-624 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 GeneTree:ENSGT00530000063661 EMBL:AL928892
Ensembl:ENSDART00000150719 Bgee:H0WEE0 Uniprot:H0WEE0
Length = 1670
Score = 151 (58.2 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 25/76 (32%), Positives = 46/76 (60%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTSEVIAPGQKL 378
C IC G+ D+L++C+ C YH+ CL PPL++VP + EWFCP C + + +++
Sbjct: 185 CEICGGRDREDRLLLCDGCDAGYHMECLTPPLDAVPVE-EWFCPECIANNRT--SGSEQI 241
Query: 379 KDSKKKARMASTNSKS 394
+ + + +++S+S
Sbjct: 242 SEEESSSLPTTSHSRS 257
>UNIPROTKB|F1P5W9 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000793
"condensed chromosome" evidence=IEA] [GO:0003007 "heart
morphogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004713 "protein tyrosine kinase activity"
evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0032947 "protein complex scaffold" evidence=IEA]
[GO:0034725 "DNA replication-dependent nucleosome disassembly"
evidence=IEA] [GO:0035173 "histone kinase activity" evidence=IEA]
[GO:0042809 "vitamin D receptor binding" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=IEA]
[GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0071778 "WINAC complex" evidence=IEA] [GO:0071884 "vitamin D
receptor activator activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184 SMART:SM00249
SMART:SM00297 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0004713 GO:GO:0043596 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006302 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005721 GO:GO:0000793 GO:GO:0048096
GO:GO:0043044 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018500
InterPro:IPR018501 InterPro:IPR013136 Pfam:PF10537 SMART:SM00571
PROSITE:PS50827 PROSITE:PS51136 GeneTree:ENSGT00660000095335
OMA:CNKAFHL GO:GO:0071778 GO:GO:0035173 GO:GO:0071884 GO:GO:0034725
EMBL:AADN02026113 EMBL:AADN02026114 IPI:IPI00820657
Ensembl:ENSGALT00000040681 ArrayExpress:F1P5W9 Uniprot:F1P5W9
Length = 1488
Score = 151 (58.2 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTSEVIAPGQKL 378
C +C K DKLI+C+EC +H++CL+P L +P D EW CP+C+ T+ + G+
Sbjct: 1186 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEIP-DGEWQCPACQPSTARRSSRGRNY 1244
Query: 379 -KDS 381
+DS
Sbjct: 1245 TEDS 1248
Score = 51 (23.0 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 174 VHLKYKDDGSST-MKFDDIRPLPKHLITEFNENLIGVRVMGNYNAEEPRERGYWHDMIIE 232
VHL+ GS MK I PK + E + + ++ N++ + G + ++
Sbjct: 341 VHLEKSIIGSPLKMKNSKISKCPKEELEEMMKIMSPGKLDSNFHIPKRSRLGKGSNKSLD 400
Query: 233 KKQ-GKRL 239
KKQ GKR+
Sbjct: 401 KKQRGKRV 408
Score = 37 (18.1 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 7/32 (21%), Positives = 19/32 (59%)
Query: 25 SDMKTQIENTLDVPVDKQRLFYKGKQLEDEYM 56
SD++ + E + +V K ++ +++DE++
Sbjct: 695 SDVQEESEVSDNVDESKDSATFEDNEVQDEFL 726
>UNIPROTKB|C1BGZ8 [details] [associations]
symbol:ubl4aa "Ubiquitin-like protein 4A-A" species:8022
"Oncorhynchus mykiss" [GO:0005829 "cytosol" evidence=ISS]
[GO:0071816 "tail-anchored membrane protein insertion into ER
membrane" evidence=ISS] [GO:0071818 "BAT3 complex" evidence=ISS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0006810 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0071818
GO:GO:0071816 InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348
EMBL:BT073877 ProteinModelPortal:C1BGZ8 Uniprot:C1BGZ8
Length = 154
Score = 121 (47.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 25/91 (27%), Positives = 51/91 (56%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + ++ L G K C + +++ +S +K + L++P +QRL YKGK L DE+ L DY
Sbjct: 1 MILTVKPLQG-KECNVQVTEDEKVSTVKELVSERLNIPASQQRLLYKGKALADEHRLSDY 59
Query: 61 NVNLNDVIQLMIKADIDKNYQSSESSSKENI 91
++ + L+++ +++ + +SS +
Sbjct: 60 SIGPEAKLNLVVRPAGERSGVAGMASSSSAV 90
>UNIPROTKB|G3V661 [details] [associations]
symbol:Baz1b "Bromodomain adjacent to zinc finger domain
protein 1B" species:10116 "Rattus norvegicus" [GO:0000793
"condensed chromosome" evidence=IEA] [GO:0003007 "heart
morphogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004713 "protein tyrosine kinase activity"
evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0032947 "protein complex scaffold" evidence=IEA] [GO:0034725
"DNA replication-dependent nucleosome disassembly" evidence=IEA]
[GO:0035173 "histone kinase activity" evidence=IEA] [GO:0042809
"vitamin D receptor binding" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=IEA]
[GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0071778 "WINAC complex" evidence=IEA] [GO:0071884 "vitamin D
receptor activator activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184 SMART:SM00249
SMART:SM00297 RGD:1597089 GO:GO:0046872 GO:GO:0008270 EMBL:CH473973
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 CTD:9031 KO:K11658
OMA:CNKAFHL EMBL:AC090529 RefSeq:NP_001178845.1 UniGene:Rn.7043
Ensembl:ENSRNOT00000001975 GeneID:368002 KEGG:rno:368002
NextBio:691979 Uniprot:G3V661
Length = 1476
Score = 150 (57.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 36/106 (33%), Positives = 56/106 (52%)
Query: 264 KFVKELYKIESPKLLAERTAEDEDHMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICA 323
K V+E K+ S L +TA E + L ++ C D+ ++ + C +C
Sbjct: 1135 KMVEEA-KVASA-LEKWKTAIREAQTFSRMHVLLGMLDACIKW-DMSAENAR---CKVCR 1188
Query: 324 GKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTS 369
K DKLI+C+EC +H++CL+P L VP D EW CP+C+ T+
Sbjct: 1189 KKGEDDKLILCDECNKAFHLFCLRPALYEVP-DGEWQCPACQPPTA 1233
>MGI|MGI:1353499 [details] [associations]
symbol:Baz1b "bromodomain adjacent to zinc finger domain,
1B" species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000793 "condensed chromosome" evidence=IDA]
[GO:0003007 "heart morphogenesis" evidence=IMP] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0004713 "protein tyrosine
kinase activity" evidence=ISO] [GO:0004715 "non-membrane spanning
protein tyrosine kinase activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005721
"centromeric heterochromatin" evidence=IDA] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0006333 "chromatin
assembly or disassembly" evidence=IDA] [GO:0006337 "nucleosome
disassembly" evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016572 "histone
phosphorylation" evidence=ISO] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0032947 "protein complex scaffold" evidence=ISO]
[GO:0034725 "DNA replication-dependent nucleosome disassembly"
evidence=ISO] [GO:0035173 "histone kinase activity" evidence=ISO]
[GO:0042393 "histone binding" evidence=IPI] [GO:0042809 "vitamin D
receptor binding" evidence=ISO] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048096 "chromatin-mediated maintenance of
transcription" evidence=IMP] [GO:0070577 "histone acetyl-lysine
binding" evidence=ISO] [GO:0071778 "WINAC complex" evidence=ISO]
[GO:0071884 "vitamin D receptor activator activity"
evidence=ISO;IMP] InterPro:IPR001841 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00297 MGI:MGI:1353499 GO:GO:0005524
GO:GO:0046872 GO:GO:0003007 GO:GO:0008270 EMBL:CH466529
GO:GO:0006351 GO:GO:0003682 GO:GO:0004715 GO:GO:0004713
GO:GO:0043596 GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006302 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005721 GO:GO:0000793 GO:GO:0048096
GO:GO:0016585 GO:GO:0043044 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
InterPro:IPR018500 InterPro:IPR018501 InterPro:IPR013136
Pfam:PF10537 SMART:SM00571 PROSITE:PS50827 PROSITE:PS51136
GeneTree:ENSGT00660000095335 CTD:9031 HOVERGEN:HBG050668 KO:K11658
OMA:CNKAFHL OrthoDB:EOG4MKNFK ChiTaRS:BAZ1B GO:GO:0071778
GO:GO:0035173 GO:GO:0071884 GO:GO:0034725 EMBL:AF084480
EMBL:BC141399 EMBL:AK017894 EMBL:AK037737 EMBL:AK137139
EMBL:AK140172 EMBL:AK141305 IPI:IPI00923656 IPI:IPI00930843
PIR:T17401 RefSeq:NP_035844.2 UniGene:Mm.40331
ProteinModelPortal:Q9Z277 SMR:Q9Z277 DIP:DIP-36072N IntAct:Q9Z277
STRING:Q9Z277 PhosphoSite:Q9Z277 PaxDb:Q9Z277 PRIDE:Q9Z277
Ensembl:ENSMUST00000002825 GeneID:22385 KEGG:mmu:22385
UCSC:uc008zxz.2 InParanoid:Q3USR7 NextBio:302753 Bgee:Q9Z277
CleanEx:MM_BAZ1B Genevestigator:Q9Z277
GermOnline:ENSMUSG00000002748 Uniprot:Q9Z277
Length = 1479
Score = 150 (57.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 36/106 (33%), Positives = 56/106 (52%)
Query: 264 KFVKELYKIESPKLLAERTAEDEDHMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICA 323
K V+E K+ S L +TA E + L ++ C D+ ++ + C +C
Sbjct: 1138 KMVEEA-KVASA-LEKWKTAIREAQTFSRMHVLLGMLDACIKW-DMSAENAR---CKVCR 1191
Query: 324 GKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTS 369
K DKLI+C+EC +H++CL+P L VP D EW CP+C+ T+
Sbjct: 1192 KKGEDDKLILCDECNKAFHLFCLRPALYEVP-DGEWQCPACQPPTA 1236
>UNIPROTKB|C1BXU5 [details] [associations]
symbol:ubl4a "Ubiquitin-like protein 4A" species:8010 "Esox
lucius" [GO:0005829 "cytosol" evidence=ISS] [GO:0071816
"tail-anchored membrane protein insertion into ER membrane"
evidence=ISS] [GO:0071818 "BAT3 complex" evidence=ISS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0006810 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0071818
GO:GO:0071816 InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348
EMBL:BT079424 ProteinModelPortal:C1BXU5 Uniprot:C1BXU5
Length = 154
Score = 120 (47.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 25/91 (27%), Positives = 52/91 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + ++ L G K C + +++ +S +K + L++P ++QRL YKGK L DE+ L DY
Sbjct: 1 MILTVKPLQG-KECNVQVTEDEKVSTVKELVSERLNIPPNQQRLLYKGKALADEHRLSDY 59
Query: 61 NVNLNDVIQLMIKADIDKNYQSSESSSKENI 91
++ + L+++ +++ + +SS +
Sbjct: 60 SIGPEAKLNLVVRPAGERSGVTGMASSNSAV 90
>UNIPROTKB|E1B6X6 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071884 "vitamin D receptor activator activity"
evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA] [GO:0070577
"histone acetyl-lysine binding" evidence=IEA] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=IEA]
[GO:0043596 "nuclear replication fork" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0042809
"vitamin D receptor binding" evidence=IEA] [GO:0035173 "histone
kinase activity" evidence=IEA] [GO:0034725 "DNA
replication-dependent nucleosome disassembly" evidence=IEA]
[GO:0032947 "protein complex scaffold" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0003007 GO:GO:0008270 GO:GO:0003682 GO:GO:0004713
GO:GO:0043596 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006302 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005721 GO:GO:0000793 GO:GO:0048096
GO:GO:0043044 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 OMA:CNKAFHL
GO:GO:0071778 GO:GO:0035173 GO:GO:0071884 GO:GO:0034725
EMBL:DAAA02058197 IPI:IPI00704240 UniGene:Bt.32325
Ensembl:ENSBTAT00000006848 NextBio:20868520 Uniprot:E1B6X6
Length = 1482
Score = 149 (57.5 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTSEVIAPGQKL 378
C +C K DKLI+C+EC +H++CL+P L VP D EW CP+C+ T+ + G+
Sbjct: 1187 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVP-DGEWQCPACQPATARRNSRGRNY 1245
Query: 379 KDSKKKARMASTNSKSTRD 397
+++ A S + +S +
Sbjct: 1246 --TEESASEDSEDDESNEE 1262
>UNIPROTKB|Q9UIG0 [details] [associations]
symbol:BAZ1B "Tyrosine-protein kinase BAZ1B" species:9606
"Homo sapiens" [GO:0004715 "non-membrane spanning protein tyrosine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000793 "condensed chromosome" evidence=IEA]
[GO:0005721 "centromeric heterochromatin" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0035173 "histone kinase activity" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IDA] [GO:0016572
"histone phosphorylation" evidence=IDA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IDA] [GO:0032947 "protein
complex scaffold" evidence=IDA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IDA] [GO:0071778 "WINAC complex"
evidence=IDA] [GO:0042809 "vitamin D receptor binding"
evidence=IPI] [GO:0006337 "nucleosome disassembly" evidence=IDA]
[GO:0034725 "DNA replication-dependent nucleosome disassembly"
evidence=IMP] [GO:0071884 "vitamin D receptor activator activity"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=NAS] [GO:0043596 "nuclear replication fork" evidence=IDA]
[GO:0003007 "heart morphogenesis" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=ISS]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00297 GO:GO:0005524 GO:GO:0046872 GO:GO:0003007
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 GO:GO:0004715
GO:GO:0004713 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006302 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005721 GO:GO:0032947 GO:GO:0000793
GO:GO:0048096 GO:GO:0043044 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
InterPro:IPR018500 InterPro:IPR018501 InterPro:IPR013136
Pfam:PF10537 SMART:SM00571 PROSITE:PS50827 PROSITE:PS51136
EMBL:AF084479 EMBL:AF072810 EMBL:AB032253 EMBL:AC005074
EMBL:AC005089 EMBL:CH471200 EMBL:BC065029 EMBL:BC136520
IPI:IPI00069817 IPI:IPI00216695 RefSeq:NP_115784.1
UniGene:Hs.647016 PDB:1F62 PDBsum:1F62 ProteinModelPortal:Q9UIG0
SMR:Q9UIG0 DIP:DIP-35642N IntAct:Q9UIG0 MINT:MINT-1894324
STRING:Q9UIG0 PhosphoSite:Q9UIG0 DMDM:22653670 PaxDb:Q9UIG0
PRIDE:Q9UIG0 Ensembl:ENST00000339594 Ensembl:ENST00000404251
Ensembl:ENST00000573731 Ensembl:ENST00000575505 GeneID:9031
KEGG:hsa:9031 UCSC:uc003tyc.3 CTD:9031 GeneCards:GC07M072854
HGNC:HGNC:961 HPA:CAB037158 MIM:605681 neXtProt:NX_Q9UIG0
Orphanet:904 PharmGKB:PA25271 HOVERGEN:HBG050668 InParanoid:Q9UIG0
KO:K11658 OMA:CNKAFHL OrthoDB:EOG4MKNFK PhylomeDB:Q9UIG0
ChiTaRS:BAZ1B EvolutionaryTrace:Q9UIG0 GenomeRNAi:9031
NextBio:33835 Bgee:Q9UIG0 CleanEx:HS_BAZ1B Genevestigator:Q9UIG0
GermOnline:ENSG00000009954 GO:GO:0071778 GO:GO:0035173
GO:GO:0071884 GO:GO:0034725 Uniprot:Q9UIG0
Length = 1483
Score = 149 (57.5 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 36/106 (33%), Positives = 56/106 (52%)
Query: 264 KFVKELYKIESPKLLAERTAEDEDHMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICA 323
K V+E K+ S L +TA E + L ++ C D+ ++ + C +C
Sbjct: 1138 KMVEEA-KVASA-LEKWKTAIREAQTFSRMHVLLGMLDACIKW-DMSAENAR---CKVCR 1191
Query: 324 GKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTS 369
K DKLI+C+EC +H++CL+P L VP D EW CP+C+ T+
Sbjct: 1192 KKGEDDKLILCDECNKAFHLFCLRPALYEVP-DGEWQCPACQPATA 1236
>UNIPROTKB|I3L5Q3 [details] [associations]
symbol:UBL4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071818 "BAT3 complex" evidence=IEA] [GO:0071816
"tail-anchored membrane protein insertion into ER membrane"
evidence=IEA] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
Prosite:PS00299 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0071818
GO:GO:0071816 InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348
GeneTree:ENSGT00700000104456 OMA:MEKGFSK EMBL:FP326695
RefSeq:XP_003360560.1 Ensembl:ENSSSCT00000025655 GeneID:100622730
KEGG:ssc:100622730 Uniprot:I3L5Q3
Length = 195
Score = 131 (51.2 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G + C L +S+ L+S +K + L+VPV +QRL +KGK L D L DY
Sbjct: 1 MQLTVKALQG-RECSLQVSEDELVSTLKHLVSEKLNVPVRQQRLLFKGKALADGKRLSDY 59
Query: 61 NVNLNDVIQLMIK 73
+V N + L++K
Sbjct: 60 SVGPNSKLNLVVK 72
>UNIPROTKB|J9P3J2 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 SMART:SM00297 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 SMART:SM00571 PROSITE:PS50827 PROSITE:PS51136
GeneTree:ENSGT00660000095335 EMBL:AAEX03004244 EMBL:AAEX03004243
Ensembl:ENSCAFT00000046112 Uniprot:J9P3J2
Length = 1392
Score = 148 (57.2 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTS 369
C +C K DKLI+C+EC +H++CL+P L VP D EW CP+C+ T+
Sbjct: 1096 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVP-DGEWQCPACQPATA 1145
>UNIPROTKB|F1M9H9 [details] [associations]
symbol:F1M9H9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000626
InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599 SMART:SM00213
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR019956 PRINTS:PR00348 IPI:IPI00564052
Ensembl:ENSRNOT00000041694 Uniprot:F1M9H9
Length = 166
Score = 117 (46.2 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 24/73 (32%), Positives = 44/73 (60%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K +L + I ++K +I+N +P D+QRL + GKQLED + L DY
Sbjct: 16 MQIFVKTLMG-KTIMLEIEPSDTIENVKAKIQNEEGIPPDQQRLDFYGKQLEDGHTLSDY 74
Query: 61 NVNLNDVIQLMIK 73
++ + L+++
Sbjct: 75 SIQKESTLHLVLR 87
Score = 41 (19.5 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 17/65 (26%), Positives = 24/65 (36%)
Query: 376 QKLKDSKKKARMASTNSKSTRDWGKGMACVGRTKVCTIVPSDHFGPIPGIEVGQSYL-YR 434
+K K +KK ++A + GK C + HF G G+ YL Y
Sbjct: 103 KKSKHRRKKVKLAVLKHYKVDENGKIRECPSNECGAGVFMGSHFD---GHYCGKRYLTYC 159
Query: 435 FQASE 439
F E
Sbjct: 160 FNKPE 164
Score = 40 (19.1 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 627 KRKVSSETLGESKVKKSKQVYTLPSSVLEHINND 660
KRK S TL +SK ++ K + +VL+H D
Sbjct: 94 KRKKSYTTLKKSKHRRKK----VKLAVLKHYKVD 123
>UNIPROTKB|B7NZQ9 [details] [associations]
symbol:UBL4A "Ubiquitin-like protein 4A" species:9986
"Oryctolagus cuniculus" [GO:0005829 "cytosol" evidence=ISS]
[GO:0071816 "tail-anchored membrane protein insertion into ER
membrane" evidence=ISS] [GO:0071818 "BAT3 complex" evidence=ISS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0006810 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0071818
GO:GO:0071816 InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348
HOVERGEN:HBG072205 CTD:8266 HOGENOM:HOG000006827 OrthoDB:EOG42JNST
eggNOG:NOG265285 EMBL:DP001061 RefSeq:NP_001164852.1
UniGene:Ocu.7482 ProteinModelPortal:B7NZQ9 GeneID:100328764
Uniprot:B7NZQ9
Length = 157
Score = 119 (46.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 25/73 (34%), Positives = 43/73 (58%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G + C L + + +S +K + L+VPV +QRL +KGK L D L DY
Sbjct: 1 MQLTVKALQG-RECNLQVPEDEQVSTLKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDY 59
Query: 61 NVNLNDVIQLMIK 73
++ N + L++K
Sbjct: 60 SIGPNSKLNLVVK 72
>POMBASE|SPAC11G7.04 [details] [associations]
symbol:ubi1 "ribosomal-ubiquitin fusion protein Ubi1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002181
"cytoplasmic translation" evidence=NAS] [GO:0003735 "structural
constituent of ribosome" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006412
"translation" evidence=ISO] [GO:0016567 "protein ubiquitination"
evidence=ISM] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO] [GO:0042254 "ribosome biogenesis" evidence=ISO]
InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020
SMART:SM00213 PomBase:SPAC1805.12c PomBase:SPAC11G7.04
Prosite:PS00299 GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0006281 GO:GO:0042254 GO:GO:0016567
GO:GO:0003735 GO:GO:0002181 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019954 GO:GO:0022625 InterPro:IPR019956 PRINTS:PR00348
PIR:T37547 RefSeq:NP_593923.1 RefSeq:NP_594398.1
ProteinModelPortal:P0CH06 EnsemblFungi:SPAC11G7.04.1
EnsemblFungi:SPAC1805.12c.1 GeneID:2541768 GeneID:2542428
KEGG:spo:SPAC11G7.04 KEGG:spo:SPAC1805.12c KO:K02927
OrthoDB:EOG48WGBH NextBio:20802859 Uniprot:P0CH06
Length = 128
Score = 119 (46.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K++I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>POMBASE|SPAC1805.12c [details] [associations]
symbol:uep1 "ribosomal-ubiquitin fusion protein Ubi2"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006412
"translation" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] [GO:0042254 "ribosome biogenesis"
evidence=ISO] InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240
Pfam:PF01020 SMART:SM00213 PomBase:SPAC1805.12c PomBase:SPAC11G7.04
Prosite:PS00299 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006281 GO:GO:0042254 GO:GO:0003735
GO:GO:0002181 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
GO:GO:0022625 InterPro:IPR019956 PRINTS:PR00348 PIR:T37547
RefSeq:NP_593923.1 RefSeq:NP_594398.1 EnsemblFungi:SPAC11G7.04.1
EnsemblFungi:SPAC1805.12c.1 GeneID:2541768 GeneID:2542428
KEGG:spo:SPAC11G7.04 KEGG:spo:SPAC1805.12c KO:K02927
OrthoDB:EOG48WGBH NextBio:20802859 ProteinModelPortal:P0CH07
Uniprot:P0CH07
Length = 128
Score = 119 (46.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K++I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>POMBASE|SPAC589.10c [details] [associations]
symbol:SPAC589.10c "ribosomal-ubiquitin fusion protein
Ubi5 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003735 "structural constituent of ribosome" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISM] [GO:0042254
"ribosome biogenesis" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240
Pfam:PF01599 SMART:SM00213 PomBase:SPAC589.10c Prosite:PS00299
GO:GO:0005737 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0046872 GO:GO:0006412 GO:GO:0006281 GO:GO:0042254
GO:GO:0016567 GO:GO:0005840 GO:GO:0003735 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR019954 eggNOG:COG5272
InterPro:IPR019956 PRINTS:PR00348 KO:K02977 OMA:KKVYTTP
HOGENOM:HOG000233943 OrthoDB:EOG4F21CP RefSeq:NP_594058.1
ProteinModelPortal:P0C8R3 SMR:P0C8R3 STRING:P0C8R3
EnsemblFungi:SPAC589.10c.1 GeneID:2542138 KEGG:spo:SPAC589.10c
NextBio:20803210 Uniprot:P0C8R3
Length = 150
Score = 119 (46.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K++I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>POMBASE|SPAC6G10.11c [details] [associations]
symbol:ubi3 "ribosomal-ubiquitin fusion protein Ubi3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003735
"structural constituent of ribosome" evidence=ISO] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240
Pfam:PF01599 SMART:SM00213 PomBase:SPAC6G10.11c Prosite:PS00299
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872
GO:GO:0006412 GO:GO:0006281 GO:GO:0042254 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0022627 InterPro:IPR019956 PRINTS:PR00348
KO:K02977 OMA:FYKIDGS HOGENOM:HOG000233943 PIR:T39061
RefSeq:NP_594108.1 ProteinModelPortal:P0C016 STRING:P0C016
PRIDE:P0C016 EnsemblFungi:SPAC6G10.11c.1 GeneID:2541445
KEGG:spo:SPAC6G10.11c OrthoDB:EOG4F21CP NextBio:20802547
Uniprot:P0C016
Length = 150
Score = 119 (46.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K++I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>SGD|S000001410 [details] [associations]
symbol:RPL40A "Ubiquitin-ribosomal 60S subunit protein L40A
fusion protein" species:4932 "Saccharomyces cerevisiae" [GO:0003735
"structural constituent of ribosome" evidence=IEA;TAS] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0042254 "ribosome biogenesis" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IMP] [GO:0031386 "protein tag"
evidence=ISS] [GO:0002181 "cytoplasmic translation" evidence=TAS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=TAS]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000626
InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020 SMART:SM00213
SGD:S000001410 Prosite:PS00299 GO:GO:0005634 EMBL:BK006942
GO:GO:0006281 GO:GO:0042254 GO:GO:0016567 GO:GO:0003735
GO:GO:0002181 EMBL:Z38059 InterPro:IPR019955 PROSITE:PS50053
PDB:4B6A PDBsum:4B6A GO:GO:0031386 InterPro:IPR019954 GO:GO:0022625
InterPro:IPR019956 PRINTS:PR00348 KO:K15902 RefSeq:NP_878113.4
GeneID:1500489 KEGG:sce:YKR095W-A PDB:3IZS PDB:3U5E PDB:3U5I
PDBsum:3IZS PDBsum:3U5E PDBsum:3U5I KO:K02927 OrthoDB:EOG48WGBH
EMBL:X05728 EMBL:X05729 PIR:A29456 RefSeq:NP_012118.1
RefSeq:NP_013020.3 ProteinModelPortal:P0CH08 SMR:P0CH08
SWISS-2DPAGE:P61864 EnsemblFungi:YIL148W EnsemblFungi:YKR094C
GeneID:853969 GeneID:854658 KEGG:sce:YIL148W KEGG:sce:YKR094C
NextBio:975410 ArrayExpress:P0CH08 Genevestigator:P61864
GermOnline:YIL148W GermOnline:YKR094C GermOnline:YLL039C
GermOnline:YLR167W Uniprot:P0CH08
Length = 128
Score = 119 (46.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K++I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>SGD|S000001802 [details] [associations]
symbol:RPL40B "Ubiquitin-ribosomal 60S subunit protein L40B
fusion protein" species:4932 "Saccharomyces cerevisiae" [GO:0005840
"ribosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;TAS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0002181 "cytoplasmic
translation" evidence=TAS] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0031386 "protein tag" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IDA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=TAS] InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240
Pfam:PF01020 SMART:SM00213 SGD:S000001802 Prosite:PS00299
GO:GO:0005739 GO:GO:0005634 GO:GO:0006281 GO:GO:0042254
EMBL:BK006944 GO:GO:0016567 GO:GO:0003735 GO:GO:0002181
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0031386 InterPro:IPR019954
GO:GO:0022625 InterPro:IPR019956 PRINTS:PR00348 KO:K15902
EMBL:X73541 RefSeq:NP_878113.4 GeneID:1500489 KEGG:sce:YKR095W-A
KO:K02927 OrthoDB:EOG48WGBH PIR:A29456 RefSeq:NP_012118.1
RefSeq:NP_013020.3 SWISS-2DPAGE:P61864 EnsemblFungi:YIL148W
EnsemblFungi:YKR094C GeneID:853969 GeneID:854658 KEGG:sce:YIL148W
KEGG:sce:YKR094C NextBio:975410 Genevestigator:P61864
GermOnline:YIL148W GermOnline:YKR094C GermOnline:YLL039C
GermOnline:YLR167W EMBL:Z28319 ProteinModelPortal:P0CH09 SMR:P0CH09
GeneTree:ENSGT00700000104456 ArrayExpress:P0CH09 Uniprot:P0CH09
Length = 128
Score = 119 (46.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K++I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>UNIPROTKB|E2RED7 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 SMART:SM00297 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 EMBL:AAEX03004244
EMBL:AAEX03004243 Ensembl:ENSCAFT00000020881 Uniprot:E2RED7
Length = 1482
Score = 148 (57.2 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTS 369
C +C K DKLI+C+EC +H++CL+P L VP D EW CP+C+ T+
Sbjct: 1186 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVP-DGEWQCPACQPATA 1235
>UNIPROTKB|J9PAU7 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 SMART:SM00297 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 OMA:CNKAFHL
EMBL:AAEX03004244 EMBL:AAEX03004243 Ensembl:ENSCAFT00000046458
Uniprot:J9PAU7
Length = 1485
Score = 148 (57.2 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTS 369
C +C K DKLI+C+EC +H++CL+P L VP D EW CP+C+ T+
Sbjct: 1189 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVP-DGEWQCPACQPATA 1238
>ZFIN|ZDB-GENE-040813-1 [details] [associations]
symbol:rnf114 "ring finger protein 114" species:7955
"Danio rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089
SMART:SM00184 SMART:SM00355 Prosite:PS00518 Pfam:PF05605
ZFIN:ZDB-GENE-040813-1 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR008598 CTD:55905 eggNOG:NOG145063
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946
HOVERGEN:HBG074331 KO:K15697 OMA:IEHIQRR OrthoDB:EOG4CVG7Q
EMBL:CR759920 EMBL:BC079515 EMBL:AY609381 IPI:IPI00508716
RefSeq:NP_001001828.2 UniGene:Dr.86280 Ensembl:ENSDART00000019667
GeneID:414843 KEGG:dre:414843 InParanoid:Q6J0N1 NextBio:20818739
Uniprot:Q6J0N1
Length = 221
Score = 133 (51.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 25/80 (31%), Positives = 44/80 (55%)
Query: 672 ALCK-EGQKEVLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCP 730
A+ K + Q +V + + F+C +C E+ +P+T C HTFC+DCL+ + +S C
Sbjct: 2 AMLKIDPQTDVNDAEDDDFVCPVCLEIFVRPMTTQCGHTFCNDCLQECLRPQSPVC---A 58
Query: 731 YCRKEMNKSCLETHSNDALQ 750
CR ++ K + H D ++
Sbjct: 59 VCRTDLRKWAKDDHLQDLMK 78
>UNIPROTKB|D4A0Y0 [details] [associations]
symbol:D4A0Y0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104499 EMBL:AC113720
IPI:IPI00359118 Ensembl:ENSRNOT00000030827 Uniprot:D4A0Y0
Length = 151
Score = 118 (46.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 681 VLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIE--SDACNSCPYCR 733
VLE I+E+ C IC EL+ +P++ DC H+FC C+ ++ ++ SCP CR
Sbjct: 5 VLEMIKEEVTCPICLELLKEPVSTDCNHSFCRACITINYESNRNTEGEGSCPVCR 59
>TAIR|locus:2028005 [details] [associations]
symbol:AT1G23410 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
[GO:0052541 "plant-type cell wall cellulose metabolic process"
evidence=RCA] [GO:0052546 "cell wall pectin metabolic process"
evidence=RCA] InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240
Pfam:PF01599 SMART:SM00213 Prosite:PS00299 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005634
GO:GO:0005794 GO:GO:0046872 GO:GO:0006412 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 EMBL:AC007945 InterPro:IPR019954
eggNOG:COG5272 EMBL:AC005292 GO:GO:0022627 InterPro:IPR019956
PRINTS:PR00348 EMBL:BT024763 EMBL:AY085389 IPI:IPI00520784
PIR:H86367 RefSeq:NP_173755.1 UniGene:At.41552
ProteinModelPortal:P59271 SMR:P59271 STRING:P59271 PaxDb:P59271
PRIDE:P59271 EnsemblPlants:AT1G23410.1 GeneID:838949
KEGG:ath:AT1G23410 TAIR:At1g23410 KO:K02977 OMA:PGTFMAS
ProtClustDB:CLSN2682087 GermOnline:AT1G23410 Uniprot:P59271
Length = 156
Score = 118 (46.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>TAIR|locus:2053496 [details] [associations]
symbol:UBQ2 "ubiquitin extension protein 2" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020
SMART:SM00213 Prosite:PS00299 GenomeReviews:BA000014_GR
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0006412
EMBL:AC006921 GO:GO:0003735 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019954 eggNOG:COG5272 EMBL:AC007135 GO:GO:0022625
UniGene:At.24656 UniGene:At.35280 InterPro:IPR019956 PRINTS:PR00348
KO:K02927 EMBL:J05508 EMBL:AF360311 EMBL:AY056360 EMBL:AK317456
IPI:IPI00533306 PIR:B36571 RefSeq:NP_565836.1 RefSeq:NP_566969.1
UniGene:At.23108 ProteinModelPortal:B9DHA6 SMR:B9DHA6 STRING:B9DHA6
PaxDb:B9DHA6 PRIDE:B9DHA6 EnsemblPlants:AT2G36170.1
EnsemblPlants:AT3G52590.1 GeneID:818189 GeneID:824425
KEGG:ath:AT2G36170 KEGG:ath:AT3G52590 GeneFarm:382 TAIR:At2g36170
ProtClustDB:CLSN2688722 Uniprot:B9DHA6
Length = 128
Score = 118 (46.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>TAIR|locus:2041459 [details] [associations]
symbol:UBQ6 "ubiquitin 6" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA;TAS]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR000626
InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599 SMART:SM00213
Prosite:PS00299 GO:GO:0005634 GO:GO:0005794 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006412 EMBL:AC004411
GO:GO:0003735 GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019954 eggNOG:COG5272 GO:GO:0022627 InterPro:IPR019956
PRINTS:PR00348 KO:K02977 ProtClustDB:CLSN2682087 EMBL:J05540
EMBL:AF375416 EMBL:AY142033 EMBL:AY143810 EMBL:AY088370
IPI:IPI00534346 PIR:D36571 RefSeq:NP_001189768.1 RefSeq:NP_566095.1
UniGene:At.27680 UniGene:At.75284 ProteinModelPortal:P59232
SMR:P59232 IntAct:P59232 STRING:P59232 PaxDb:P59232 PRIDE:P59232
EnsemblPlants:AT2G47110.1 EnsemblPlants:AT2G47110.2 GeneID:819323
KEGG:ath:AT2G47110 TAIR:At2g47110 OMA:KKVYTTP GermOnline:AT2G47110
Uniprot:P59232
Length = 157
Score = 118 (46.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>TAIR|locus:2079924 [details] [associations]
symbol:UBQ1 "ubiquitin extension protein 1" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=NAS] [GO:0016567
"protein ubiquitination" evidence=TAS] InterPro:IPR000626
InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020 SMART:SM00213
Prosite:PS00299 GO:GO:0005634 EMBL:CP002686 GO:GO:0006412
GO:GO:0016567 GO:GO:0005840 GO:GO:0003735 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR019954 eggNOG:COG5272 EMBL:AL050300
EMBL:AL353912 UniGene:At.24656 UniGene:At.35280 InterPro:IPR019956
PRINTS:PR00348 KO:K02927 IPI:IPI00533306 RefSeq:NP_565836.1
RefSeq:NP_566969.1 UniGene:At.23108 EnsemblPlants:AT2G36170.1
EnsemblPlants:AT3G52590.1 GeneID:818189 GeneID:824425
KEGG:ath:AT2G36170 KEGG:ath:AT3G52590 ProtClustDB:CLSN2688722
EMBL:J05507 EMBL:AY035148 EMBL:AY059080 EMBL:AY085820 EMBL:Z29051
PIR:A36571 ProteinModelPortal:Q42202 SMR:Q42202 STRING:Q42202
PaxDb:Q42202 PRIDE:Q42202 GeneFarm:383 TAIR:At3g52590
Uniprot:Q42202
Length = 128
Score = 118 (46.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>TAIR|locus:2098003 [details] [associations]
symbol:UBQ5 "ubiquitin 5" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] InterPro:IPR000626 InterPro:IPR002906
Pfam:PF00240 Pfam:PF01599 SMART:SM00213 Prosite:PS00299
GO:GO:0005634 GO:GO:0005794 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0006412 GO:GO:0003735 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR019954 eggNOG:COG5272 EMBL:AL138651
GO:GO:0022627 UniGene:At.24823 InterPro:IPR019956 PRINTS:PR00348
UniGene:At.17613 KO:K02977 ProtClustDB:CLSN2682087 EMBL:J05539
EMBL:AY052219 EMBL:AY139810 EMBL:AK226902 EMBL:AY084978
IPI:IPI00534462 PIR:C36571 RefSeq:NP_191784.1 UniGene:At.333
ProteinModelPortal:P59233 SMR:P59233 IntAct:P59233 STRING:P59233
PaxDb:P59233 PRIDE:P59233 EnsemblPlants:AT3G62250.1 GeneID:825398
KEGG:ath:AT3G62250 TAIR:At3g62250 OMA:FYKIDGS Genevestigator:P59233
GermOnline:AT3G62250 Uniprot:P59233
Length = 157
Score = 118 (46.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>TAIR|locus:505006295 [details] [associations]
symbol:UBQ7 "AT2G35635" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=TAS] [GO:0006464
"cellular protein modification process" evidence=ISS] [GO:0005829
"cytosol" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 Prosite:PS00299 GO:GO:0005634 GO:GO:0005737
EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC006068 GO:GO:0006511
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 InterPro:IPR019956 PRINTS:PR00348 KO:K12158
ProtClustDB:CLSN2688712 EMBL:AK118678 EMBL:AY074850 EMBL:AY093802
IPI:IPI00531002 PIR:S55242 RefSeq:NP_565812.1 UniGene:At.37643
ProteinModelPortal:Q8RUC6 SMR:Q8RUC6 STRING:Q8RUC6 PaxDb:Q8RUC6
PRIDE:Q8RUC6 EnsemblPlants:AT2G35635.1 GeneID:818132
KEGG:ath:AT2G35635 TAIR:At2g35635 OMA:YRIKERV Genevestigator:Q8RUC6
GermOnline:AT2G35635 Uniprot:Q8RUC6
Length = 154
Score = 118 (46.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>TAIR|locus:2197525 [details] [associations]
symbol:RUB1 "AT1G31340" species:3702 "Arabidopsis
thaliana" [GO:0006464 "cellular protein modification process"
evidence=ISS] [GO:0045116 "protein neddylation" evidence=TAS]
[GO:0009693 "ethylene biosynthetic process" evidence=IMP]
[GO:0009790 "embryo development" evidence=IGI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009733 "response to auxin stimulus" evidence=TAS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886
GO:GO:0005634 GO:GO:0009693 GO:GO:0009733 GO:GO:0009790
EMBL:AC007654 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0045116 InterPro:IPR019956 PRINTS:PR00348
KO:K12158 EMBL:BT005749 EMBL:BT006110 EMBL:AK228591 IPI:IPI00544216
PIR:C86439 RefSeq:NP_564379.2 UniGene:At.25337 UniGene:At.30783
UniGene:At.43046 PDB:1BT0 PDBsum:1BT0 ProteinModelPortal:Q9SHE7
SMR:Q9SHE7 STRING:Q9SHE7 PaxDb:Q9SHE7 PRIDE:Q9SHE7 ProMEX:Q9SHE7
EnsemblPlants:AT1G31340.1 GeneID:840023 KEGG:ath:AT1G31340
TAIR:At1g31340 OMA:INIEPND PhylomeDB:Q9SHE7 ProtClustDB:CLSN2688712
EvolutionaryTrace:Q9SHE7 Genevestigator:Q9SHE7 GermOnline:AT1G31340
Uniprot:Q9SHE7
Length = 156
Score = 118 (46.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>UNIPROTKB|F1NGE3 [details] [associations]
symbol:UBB "Polyubiquitin-B" species:9031 "Gallus gallus"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
GeneTree:ENSGT00550000074658 InterPro:IPR019956 PRINTS:PR00348
EMBL:AADN02025813 EMBL:AADN02025812 IPI:IPI00820812
Ensembl:ENSGALT00000039524 ArrayExpress:F1NGE3 Uniprot:F1NGE3
Length = 157
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 81 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 139
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 140 NIQKESTLHLVLR 152
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 5 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 63
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 64 NIQKESTLHLVLR 76
>UNIPROTKB|Q91021 [details] [associations]
symbol:UBB "Ubiquitin" species:9031 "Gallus gallus"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 HSSP:Q862M4 InterPro:IPR019954
eggNOG:COG5272 GeneTree:ENSGT00550000074658 HOVERGEN:HBG000057
InterPro:IPR019956 PRINTS:PR00348 HOGENOM:HOG000233942
OrthoDB:EOG4WDDB6 UniGene:Gga.39142 EMBL:AADN02025813
EMBL:AADN02025812 EMBL:M11100 IPI:IPI00819877 PIR:I50438
STRING:Q91021 Ensembl:ENSGALT00000039515 InParanoid:Q91021
Uniprot:Q91021
Length = 157
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 81 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 139
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 140 NIQKESTLHLVLR 152
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 5 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 63
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 64 NIQKESTLHLVLR 76
>UNIPROTKB|F5H265 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC126309 HGNC:HGNC:12468
ChiTaRS:UBC IPI:IPI01015565 ProteinModelPortal:F5H265 SMR:F5H265
Ensembl:ENST00000535131 ArrayExpress:F5H265 Bgee:F5H265
Uniprot:F5H265
Length = 149
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 77 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 135
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 136 NIQKESTLHLVLR 148
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>UNIPROTKB|F5H388 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC126309 HGNC:HGNC:12468
ChiTaRS:UBC IPI:IPI01015113 ProteinModelPortal:F5H388 SMR:F5H388
Ensembl:ENST00000541645 ArrayExpress:F5H388 Bgee:F5H388
Uniprot:F5H388
Length = 155
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 77 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 135
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 136 NIQKESTLHLVLR 148
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>UNIPROTKB|F5H7Y5 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC126309 HGNC:HGNC:12468
ChiTaRS:UBC IPI:IPI01010419 ProteinModelPortal:F5H7Y5 SMR:F5H7Y5
Ensembl:ENST00000544656 UCSC:uc001ugv.3 ArrayExpress:F5H7Y5
Bgee:F5H7Y5 Uniprot:F5H7Y5
Length = 153
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 77 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 135
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 136 NIQKESTLHLVLR 148
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>UNIPROTKB|G3V9Z2 [details] [associations]
symbol:LOC100360548 "Protein LOC100360548" species:10116
"Rattus norvegicus" [GO:0007141 "male meiosis I" evidence=IEA]
[GO:0007144 "female meiosis I" evidence=IEA] [GO:0008585 "female
gonad development" evidence=IEA] [GO:0010992 "ubiquitin
homeostasis" evidence=IEA] [GO:0021888 "hypothalamus
gonadotrophin-releasing hormone neuron development" evidence=IEA]
[GO:0060613 "fat pad development" evidence=IEA] [GO:0072520
"seminiferous tubule development" evidence=IEA] [GO:0097009 "energy
homeostasis" evidence=IEA] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 Prosite:PS00299 InterPro:IPR019955 PROSITE:PS50053
EMBL:CH473948 InterPro:IPR019954 GeneTree:ENSGT00550000074658
InterPro:IPR019956 PRINTS:PR00348 ProteinModelPortal:G3V9Z2
SMR:G3V9Z2 Ensembl:ENSRNOT00000066885 RGD:2321909 Uniprot:G3V9Z2
Length = 153
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 77 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 135
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 136 NIQKESTLHLVLR 148
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>UNIPROTKB|F5H2Z3 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC126309 HGNC:HGNC:12468
ChiTaRS:UBC IPI:IPI01014205 ProteinModelPortal:F5H2Z3 SMR:F5H2Z3
Ensembl:ENST00000546271 ArrayExpress:F5H2Z3 Bgee:F5H2Z3
Uniprot:F5H2Z3
Length = 136
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
Score = 105 (42.0 bits), Expect = 0.00010, P = 0.00010
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 77 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 135
Query: 61 N 61
N
Sbjct: 136 N 136
>FB|FBgn0003941 [details] [associations]
symbol:RpL40 "Ribosomal protein L40" species:7227 "Drosophila
melanogaster" [GO:0006412 "translation" evidence=ISS;TAS]
[GO:0003735 "structural constituent of ribosome"
evidence=ISS;NAS;TAS] [GO:0006464 "cellular protein modification
process" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=ISS;IDA] [GO:0005840 "ribosome"
evidence=NAS] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
Reactome:REACT_97910 InterPro:IPR000626 InterPro:IPR001975
Pfam:PF00240 Pfam:PF01020 SMART:SM00213 Prosite:PS00299
GO:GO:0005634 GO:GO:0005875 EMBL:AE014134 GO:GO:0005811
GO:GO:0006412 GO:GO:0006464 GO:GO:0003735 GO:GO:0006511
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0022625 InterPro:IPR019956 PRINTS:PR00348
KO:K02927 GeneTree:ENSGT00700000104456 OMA:QKYNCEK EMBL:X53059
EMBL:X59943 RefSeq:NP_476776.1 UniGene:Dm.19778
ProteinModelPortal:P18101 SMR:P18101 IntAct:P18101 STRING:P18101
PaxDb:P18101 PRIDE:P18101 EnsemblMetazoa:FBtr0077470 GeneID:33629
KEGG:dme:Dmel_CG2960 CTD:33629 FlyBase:FBgn0003941
InParanoid:P18101 OrthoDB:EOG4QBZNR PhylomeDB:P18101 ChiTaRS:RpL40
GenomeRNAi:33629 NextBio:784516 Bgee:P18101 GermOnline:CG2960
Uniprot:P18101
Length = 128
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>FB|FBgn0003942 [details] [associations]
symbol:RpS27A "Ribosomal protein S27A" species:7227
"Drosophila melanogaster" [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0003735 "structural constituent of ribosome" evidence=ISS;NAS]
[GO:0005840 "ribosome" evidence=NAS] [GO:0005875 "microtubule
associated complex" evidence=IDA] Reactome:REACT_97910
InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599
SMART:SM00213 Prosite:PS00299 GO:GO:0005829 GO:GO:0005634
GO:GO:0005875 EMBL:AE014134 GO:GO:0046872 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019954 eggNOG:COG5272 InterPro:IPR019956 PRINTS:PR00348
KO:K02977 OMA:KKVYTTP CTD:6233 GeneTree:ENSGT00550000074763
EMBL:M22536 EMBL:X69119 RefSeq:NP_476778.1 UniGene:Dm.36737
UniGene:Dm.4835 ProteinModelPortal:P15357 SMR:P15357 IntAct:P15357
MINT:MINT-1554051 STRING:P15357 PaxDb:P15357 PRIDE:P15357
EnsemblMetazoa:FBtr0080016 GeneID:34420 KEGG:dme:Dmel_CG5271
FlyBase:FBgn0003942 InParanoid:P15357 OrthoDB:EOG4ZPCBS
PhylomeDB:P15357 GenomeRNAi:34420 NextBio:788409 Bgee:P15357
GermOnline:CG5271 Uniprot:P15357
Length = 156
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>UNIPROTKB|F2Z4K9 [details] [associations]
symbol:UBB "Polyubiquitin-B" species:9031 "Gallus gallus"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
GeneTree:ENSGT00550000074658 InterPro:IPR019956 PRINTS:PR00348
EMBL:AADN02025813 EMBL:AADN02034856 EMBL:AADN02025812
IPI:IPI00581002 SMR:F2Z4K9 Ensembl:ENSGALT00000039511
Ensembl:ENSGALT00000039514 Ensembl:ENSGALT00000039520
Ensembl:ENSGALT00000039523 Ensembl:ENSGALT00000039614
Uniprot:F2Z4K9
Length = 76
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>UNIPROTKB|P63048 [details] [associations]
symbol:UBA52 "Ubiquitin-60S ribosomal protein L40"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000626
InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020 SMART:SM00213
Prosite:PS00299 GO:GO:0005634 GO:GO:0006412 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0022625 InterPro:IPR019956 PRINTS:PR00348
KO:K02927 GeneTree:ENSGT00700000104456 EMBL:AB098957 EMBL:BC102248
IPI:IPI00786374 RefSeq:NP_001069831.1 UniGene:Bt.13691
ProteinModelPortal:P63048 SMR:P63048 STRING:P63048 PRIDE:P63048
Ensembl:ENSBTAT00000010176 GeneID:615199 KEGG:bta:615199 CTD:7311
HOVERGEN:HBG079132 InParanoid:P63048 OMA:QKYNCEK OrthoDB:EOG4V1726
NextBio:20899498 Uniprot:P63048
Length = 128
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>UNIPROTKB|P63050 [details] [associations]
symbol:UBA52 "Ubiquitin-60S ribosomal protein L40"
species:9615 "Canis lupus familiaris" [GO:0005634 "nucleus"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020
SMART:SM00213 Prosite:PS00299 GO:GO:0005634 GO:GO:0006412
GO:GO:0003735 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0022625 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 KO:K02927 GeneTree:ENSGT00700000104456
CTD:7311 HOVERGEN:HBG079132 OMA:QKYNCEK OrthoDB:EOG4V1726
EMBL:AB032025 EMBL:AJ388512 RefSeq:NP_001121567.1 UniGene:Cfa.24507
UniGene:Cfa.3552 ProteinModelPortal:P63050 SMR:P63050 STRING:P63050
PRIDE:P63050 Ensembl:ENSCAFT00000023383 GeneID:403722
KEGG:cfa:403722 InParanoid:P63049 NextBio:20817225 Uniprot:P63050
Length = 128
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>UNIPROTKB|C9JWN8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HOGENOM:HOG000234134 HGNC:HGNC:16276 ChiTaRS:TRIM5
EMBL:AC109341 IPI:IPI00749246 ProteinModelPortal:C9JWN8 SMR:C9JWN8
STRING:C9JWN8 Ensembl:ENST00000419850 ArrayExpress:C9JWN8
Bgee:C9JWN8 Uniprot:C9JWN8
Length = 72
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 681 VLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFK--IESDACNSCPYCR 733
+L +++E+ C IC EL+ +P++LDC H+FC CL K + +SCP CR
Sbjct: 5 ILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCR 59
>UNIPROTKB|F5GYU3 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC126309 HGNC:HGNC:12468
ChiTaRS:UBC IPI:IPI01014596 ProteinModelPortal:F5GYU3 SMR:F5GYU3
Ensembl:ENST00000540700 ArrayExpress:F5GYU3 Bgee:F5GYU3
Uniprot:F5GYU3
Length = 134
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>UNIPROTKB|F5H6Q2 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC126309 HGNC:HGNC:12468
ChiTaRS:UBC IPI:IPI01018966 ProteinModelPortal:F5H6Q2 SMR:F5H6Q2
Ensembl:ENST00000535859 UCSC:uc002gyy.3 ArrayExpress:F5H6Q2
Bgee:F5H6Q2 Uniprot:F5H6Q2
Length = 123
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>UNIPROTKB|J3QS39 [details] [associations]
symbol:UBB "Ubiquitin" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC093484 HGNC:HGNC:12463
ChiTaRS:UBB Ensembl:ENST00000578706 Uniprot:J3QS39
Length = 93
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>UNIPROTKB|P62987 [details] [associations]
symbol:UBA52 "Ubiquitin-60S ribosomal protein L40"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;NAS] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=NAS;TAS] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=IDA] [GO:0006464 "cellular
protein modification process" evidence=TAS] [GO:0000075 "cell cycle
checkpoint" evidence=TAS] [GO:0000080 "G1 phase of mitotic cell
cycle" evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=TAS] [GO:0000187 "activation of MAPK activity"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002224 "toll-like receptor signaling pathway" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0002755 "MyD88-dependent toll-like
receptor signaling pathway" evidence=TAS] [GO:0002756
"MyD88-independent toll-like receptor signaling pathway"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0006413
"translational initiation" evidence=TAS] [GO:0006414 "translational
elongation" evidence=TAS] [GO:0006415 "translational termination"
evidence=TAS] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=TAS] [GO:0006915 "apoptotic
process" evidence=TAS] [GO:0006977 "DNA damage response, signal
transduction by p53 class mediator resulting in cell cycle arrest"
evidence=TAS] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0007179 "transforming growth
factor beta receptor signaling pathway" evidence=TAS] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0007220 "Notch receptor
processing" evidence=TAS] [GO:0007249 "I-kappaB kinase/NF-kappaB
cascade" evidence=TAS] [GO:0007254 "JNK cascade" evidence=TAS]
[GO:0008063 "Toll signaling pathway" evidence=TAS] [GO:0008543
"fibroblast growth factor receptor signaling pathway" evidence=TAS]
[GO:0010008 "endosome membrane" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0016197
"endosomal transport" evidence=TAS] [GO:0019058 "viral infectious
cycle" evidence=TAS] [GO:0019083 "viral transcription"
evidence=TAS] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=TAS] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=TAS]
[GO:0030666 "endocytic vesicle membrane" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0032480 "negative regulation of type I interferon production"
evidence=TAS] [GO:0033554 "cellular response to stress"
evidence=TAS] [GO:0034130 "toll-like receptor 1 signaling pathway"
evidence=TAS] [GO:0034134 "toll-like receptor 2 signaling pathway"
evidence=TAS] [GO:0034138 "toll-like receptor 3 signaling pathway"
evidence=TAS] [GO:0034142 "toll-like receptor 4 signaling pathway"
evidence=TAS] [GO:0035666 "TRIF-dependent toll-like receptor
signaling pathway" evidence=TAS] [GO:0035872 "nucleotide-binding
domain, leucine rich repeat containing receptor signaling pathway"
evidence=TAS] [GO:0042059 "negative regulation of epidermal growth
factor receptor signaling pathway" evidence=TAS] [GO:0042590
"antigen processing and presentation of exogenous peptide antigen
via MHC class I" evidence=TAS] [GO:0042981 "regulation of apoptotic
process" evidence=TAS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=TAS] [GO:0044267 "cellular
protein metabolic process" evidence=TAS] [GO:0045087 "innate immune
response" evidence=TAS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0046788 "egress of virus within host cell" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0050852 "T cell receptor signaling pathway"
evidence=TAS] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=TAS] [GO:0051403
"stress-activated MAPK cascade" evidence=TAS] [GO:0051436 "negative
regulation of ubiquitin-protein ligase activity involved in mitotic
cell cycle" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=TAS] [GO:0070423 "nucleotide-binding
oligomerization domain containing signaling pathway" evidence=TAS]
[GO:0071456 "cellular response to hypoxia" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_6782
Reactome:REACT_13505 Reactome:REACT_81380 Reactome:REACT_216
Reactome:REACT_578 Reactome:REACT_2001 Reactome:REACT_97910
Reactome:REACT_71 Reactome:REACT_11123 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_17015 InterPro:IPR000626
InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020 SMART:SM00213
Reactome:REACT_120956 Prosite:PS00299 GO:GO:0005829 GO:GO:0005886
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0007173 GO:GO:0008543 GO:GO:0048011
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0000184 GO:GO:0042981
GO:GO:0050852 GO:GO:0007254 GO:GO:0000082 GO:GO:0006413
GO:GO:0006412 GO:GO:0043123 GO:GO:0006281 GO:GO:0045944
GO:GO:0007219 GO:GO:0045087 GO:GO:0000187 GO:GO:0019221
Reactome:REACT_115202 GO:GO:0016197 GO:GO:0010008 GO:GO:0005840
GO:GO:0000122 GO:GO:0051436 GO:GO:0003735 GO:GO:0007179
GO:GO:0007220 Reactome:REACT_107772 GO:GO:0051092
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 Reactome:REACT_8017 GO:GO:0031145 GO:GO:0051437
GO:GO:0006367 GO:GO:0016044 GO:GO:0042059 GO:GO:0061418
GO:GO:0030512 GO:GO:0002755 GO:GO:0008063 GO:GO:0034130
GO:GO:0034134 GO:GO:0034138 GO:GO:0034142 GO:GO:0035666
GO:GO:0000080 GO:GO:0032480 GO:GO:0007249 InterPro:IPR019954
eggNOG:COG5272 Reactome:REACT_24941 GO:GO:0030666 GO:GO:0070423
Reactome:REACT_383 GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0022625 GO:GO:0046788 GO:GO:0019083
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC005253 KO:K02927 CTD:7311
HOVERGEN:HBG079132 OMA:QKYNCEK OrthoDB:EOG4V1726 EMBL:X56998
EMBL:X56997 EMBL:X56999 EMBL:AF348700 EMBL:Y00361 IPI:IPI00456429
PIR:S34428 RefSeq:NP_001029102.1 RefSeq:NP_003324.1 UniGene:Hs.5308
PDB:2LJ5 PDB:4HJK PDBsum:2LJ5 PDBsum:4HJK ProteinModelPortal:P62987
SMR:P62987 IntAct:P62987 MINT:MINT-1137632 STRING:P62987
PhosphoSite:P62987 DMDM:302393718 PaxDb:P62987 PRIDE:P62987
Ensembl:ENST00000430157 Ensembl:ENST00000442744 GeneID:7311
KEGG:hsa:7311 UCSC:uc002njr.3 GeneCards:GC19P018682 HGNC:HGNC:12458
HPA:HPA041344 MIM:191321 neXtProt:NX_P62987 InParanoid:P62987
ChiTaRS:UBA52 GenomeRNAi:7311 NextBio:28582 ArrayExpress:P62987
Bgee:P62987 CleanEx:HS_UBA52 Genevestigator:P62987
GermOnline:ENSG00000196084 Uniprot:P62987
Length = 128
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>UNIPROTKB|P63053 [details] [associations]
symbol:UBA52 "Ubiquitin-60S ribosomal protein L40"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000626
InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020 SMART:SM00213
Prosite:PS00299 GO:GO:0005634 GO:GO:0006412 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0022625 InterPro:IPR019956 PRINTS:PR00348
KO:K02927 GeneTree:ENSGT00700000104456 CTD:7311 HOVERGEN:HBG079132
OMA:QKYNCEK OrthoDB:EOG4V1726 EMBL:U72496 PIR:A29584
RefSeq:NP_999376.1 UniGene:Ssc.638 ProteinModelPortal:P63053
SMR:P63053 STRING:P63053 PRIDE:P63053 Ensembl:ENSSSCT00000015193
GeneID:397418 KEGG:ssc:397418 Uniprot:P63053
Length = 128
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>UNIPROTKB|Q0D261 [details] [associations]
symbol:ubl4a "Ubiquitin-like protein 4A" species:8355
"Xenopus laevis" [GO:0005829 "cytosol" evidence=ISS] [GO:0071816
"tail-anchored membrane protein insertion into ER membrane"
evidence=ISS] [GO:0071818 "BAT3 complex" evidence=ISS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0006810 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0071818
GO:GO:0071816 InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348
HOVERGEN:HBG072205 EMBL:BC094264 EMBL:BC115000 EMBL:BC122490
UniGene:Xl.6137 ProteinModelPortal:Q0D261 SMR:Q0D261
Xenbase:XB-GENE-6253458 Uniprot:Q0D261
Length = 148
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 25/91 (27%), Positives = 51/91 (56%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G + + V T+++ +K +E L VPV +QRL ++GK L DE+ L Y
Sbjct: 1 MQLTVKALKGKEAHIQVSEGDTVLA-VKRLVEEKLQVPVSQQRLLFRGKSLADEHCLSHY 59
Query: 61 NVNLNDVIQLMIKADIDKNYQSSESSSKENI 91
++ + LM+K + S +++ +++
Sbjct: 60 SIGPGSRLNLMVKDQVAPEGHSGNNTAWKSL 90
>UNIPROTKB|P62986 [details] [associations]
symbol:Uba52 "Ubiquitin-60S ribosomal protein L40"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA]
InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020
SMART:SM00213 RGD:68344 Prosite:PS00299 GO:GO:0005634 GO:GO:0006412
GO:GO:0003735 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0022625 InterPro:IPR019956 PRINTS:PR00348
KO:K02927 CTD:7311 HOVERGEN:HBG079132 OMA:QKYNCEK OrthoDB:EOG4V1726
EMBL:X82636 EMBL:U25064 IPI:IPI00969317 RefSeq:NP_113875.1
UniGene:Rn.110618 UniGene:Rn.4300 ProteinModelPortal:P62986
SMR:P62986 STRING:P62986 PhosphoSite:P62986 PRIDE:P62986
Ensembl:ENSRNOT00000027073 GeneID:64156 KEGG:rno:64156
InParanoid:P62986 NextBio:612790 ArrayExpress:P62986
Genevestigator:P62986 GermOnline:ENSRNOG00000004426
GermOnline:ENSRNOG00000019974 GermOnline:ENSRNOG00000028756
GermOnline:ENSRNOG00000032872 GermOnline:ENSRNOG00000034246
GermOnline:ENSRNOG00000037930 Uniprot:P62986
Length = 128
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>WB|WBGene00006728 [details] [associations]
symbol:ubq-2 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0006915 "apoptotic
process" evidence=IMP] InterPro:IPR000626 InterPro:IPR001975
Pfam:PF00240 Pfam:PF01020 SMART:SM00213 Prosite:PS00299
GO:GO:0005634 GO:GO:0009792 GO:GO:0040007 GO:GO:0006915
GO:GO:0002119 GO:GO:0006412 GO:GO:0000003 GO:GO:0005840
GO:GO:0003735 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 EMBL:Z82083 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 KO:K02927 GeneTree:ENSGT00700000104456
OMA:QKYNCEK EMBL:L31492 PIR:T27638 RefSeq:NP_499695.1
ProteinModelPortal:P49632 SMR:P49632 STRING:P49632 PaxDb:P49632
EnsemblMetazoa:ZK1010.1.1 EnsemblMetazoa:ZK1010.1.2 GeneID:176718
KEGG:cel:CELE_ZK1010.1 UCSC:ZK1010.1.1 CTD:176718 WormBase:ZK1010.1
NextBio:893724 Uniprot:P49632
Length = 128
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>ZFIN|ZDB-GENE-051023-7 [details] [associations]
symbol:uba52 "ubiquitin A-52 residue ribosomal
protein fusion product 1" species:7955 "Danio rerio" [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020
SMART:SM00213 Prosite:PS00299 ZFIN:ZDB-GENE-051023-7 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019954 eggNOG:COG5272 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 KO:K02927 GeneTree:ENSGT00700000104456
CTD:7311 OMA:QKYNCEK OrthoDB:EOG4V1726 EMBL:CU693374 EMBL:BC105746
EMBL:BC107517 IPI:IPI00633761 RefSeq:NP_001032190.1
UniGene:Dr.35198 SMR:Q3B7P7 STRING:Q3B7P7
Ensembl:ENSDART00000060745 GeneID:641289 KEGG:dre:641289
HOVERGEN:HBG052927 InParanoid:Q3B7P7 NextBio:20901518
Uniprot:Q3B7P7
Length = 128
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>GENEDB_PFALCIPARUM|PF13_0346 [details] [associations]
symbol:PF13_0346 "ubiquitin/ribosomal fusion
protein uba52 homologue, putative" species:5833 "Plasmodium
falciparum" [GO:0031386 "protein tag" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020
SMART:SM00213 Prosite:PS00299 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053
HSSP:Q862M4 InterPro:IPR019954 EMBL:AL844509 InterPro:IPR019956
PRINTS:PR00348 HOGENOM:HOG000233942 KO:K02927 OMA:QKYNCEK
ProtClustDB:CLSZ2456930 RefSeq:XP_001350369.1
ProteinModelPortal:Q8ID50 SMR:Q8ID50 IntAct:Q8ID50
MINT:MINT-1633238 PRIDE:Q8ID50 EnsemblProtists:PF13_0346:mRNA
GeneID:814305 KEGG:pfa:PF13_0346 EuPathDB:PlasmoDB:PF3D7_1365900
Uniprot:Q8ID50
Length = 128
Score = 116 (45.9 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>UNIPROTKB|Q8ID50 [details] [associations]
symbol:PF13_0346 "60S ribosomal protein L40/UBI, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020
SMART:SM00213 Prosite:PS00299 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053
HSSP:Q862M4 InterPro:IPR019954 EMBL:AL844509 InterPro:IPR019956
PRINTS:PR00348 HOGENOM:HOG000233942 KO:K02927 OMA:QKYNCEK
ProtClustDB:CLSZ2456930 RefSeq:XP_001350369.1
ProteinModelPortal:Q8ID50 SMR:Q8ID50 IntAct:Q8ID50
MINT:MINT-1633238 PRIDE:Q8ID50 EnsemblProtists:PF13_0346:mRNA
GeneID:814305 KEGG:pfa:PF13_0346 EuPathDB:PlasmoDB:PF3D7_1365900
Uniprot:Q8ID50
Length = 128
Score = 116 (45.9 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>DICTYBASE|DDB_G0276765 [details] [associations]
symbol:ubqC "ubiquitin/ribosomal protein S27a fusion
protein" species:44689 "Dictyostelium discoideum" [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240
Pfam:PF01599 SMART:SM00213 dictyBase:DDB_G0276765 Prosite:PS00299
GO:GO:0005634 GO:GO:0046872 GO:GO:0006412 GenomeReviews:CM000151_GR
GO:GO:0005840 GO:GO:0003735 EMBL:AAFI02000019 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR019954 eggNOG:COG5272
InterPro:IPR019956 PRINTS:PR00348 KO:K02977 OMA:KKVYTTP EMBL:M23750
PIR:E34080 RefSeq:XP_642815.1 ProteinModelPortal:P14797
STRING:P14797 PRIDE:P14797 EnsemblProtists:DDB0191355
GeneID:8620678 KEGG:ddi:DDB_G0276765 ProtClustDB:CLSZ2430846
Uniprot:P14797
Length = 154
Score = 115 (45.5 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + I++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFIKTLTG-KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>UNIPROTKB|Q9PST8 [details] [associations]
symbol:UbI "Polyubiquitin-B" species:9031 "Gallus gallus"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
GeneTree:ENSGT00550000074658 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 UniGene:Gga.39142 EMBL:AADN02025813
EMBL:AADN02034856 EMBL:AADN02025812 EMBL:U57603 IPI:IPI00594278
STRING:Q9PST8 Ensembl:ENSGALT00000039509 Ensembl:ENSGALT00000039513
Ensembl:ENSGALT00000039519 Ensembl:ENSGALT00000039522
Ensembl:ENSGALT00000039613 InParanoid:Q9PST8 Uniprot:Q9PST8
Length = 71
Score = 115 (45.5 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMI 72
N+ + L++
Sbjct: 60 NIQKESTLHLVL 71
>ZFIN|ZDB-GENE-030131-10018 [details] [associations]
symbol:rps27a "ribosomal protein S27a"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240
Pfam:PF01599 SMART:SM00213 Prosite:PS00299
ZFIN:ZDB-GENE-030131-10018 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR019955 PROSITE:PS50053 HSSP:Q862M4
InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348 OMA:KKVYTTP
GeneTree:ENSGT00550000074763 HOGENOM:HOG000233943 EMBL:BX324134
EMBL:BC049478 IPI:IPI00510181 UniGene:Dr.75903 STRING:Q7ZU62
Ensembl:ENSDART00000129530 HOVERGEN:HBG057823 InParanoid:Q7ZU62
Uniprot:Q7ZU62
Length = 172
Score = 122 (48.0 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 28/92 (30%), Positives = 50/92 (54%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 17 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 75
Query: 61 NVNLNDVIQLMIK--ADIDKNYQSSESSSKEN 90
N+ + L+++ K + S ++ K+N
Sbjct: 76 NIQKESTLHLVLRLRGGAKKRKKKSYTTPKKN 107
>UNIPROTKB|F5H747 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 PDB:4AP4 PDBsum:4AP4
EMBL:AC126309 HGNC:HGNC:12468 ChiTaRS:UBC IPI:IPI01009501
ProteinModelPortal:F5H747 SMR:F5H747 Ensembl:ENST00000540351
ArrayExpress:F5H747 Bgee:F5H747 Uniprot:F5H747
Length = 161
Score = 117 (46.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 77 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 135
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 136 NIQKESTLHLVLR 148
Score = 117 (46.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>TAIR|locus:2169779 [details] [associations]
symbol:ATXR6 "AT5G24330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009901 "anther dehiscence" evidence=IMP] [GO:0051726
"regulation of cell cycle" evidence=IEP] [GO:0046976 "histone
methyltransferase activity (H3-K27 specific)" evidence=IDA]
[GO:0070734 "histone H3-K27 methylation" evidence=IDA] [GO:0006275
"regulation of DNA replication" evidence=IGI;RCA] [GO:0000280
"nuclear division" evidence=RCA] [GO:0000911 "cytokinesis by cell
plate formation" evidence=RCA] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] [GO:0010389 "regulation of G2/M
transition of mitotic cell cycle" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051225 "spindle assembly"
evidence=RCA] Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
SMART:SM00249 SMART:SM00317 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006275 GO:GO:0046872 EMBL:AB016884
GO:GO:0008270 EMBL:AB006701 GO:GO:0051726 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0009901
InterPro:IPR019786 PROSITE:PS01359 EMBL:BT012223 EMBL:BT012421
IPI:IPI00543408 RefSeq:NP_197821.1 UniGene:At.30965
ProteinModelPortal:Q9FNE9 SMR:Q9FNE9 DIP:DIP-48530N STRING:Q9FNE9
PRIDE:Q9FNE9 EnsemblPlants:AT5G24330.1 GeneID:832503
KEGG:ath:AT5G24330 TAIR:At5g24330 eggNOG:NOG305320
HOGENOM:HOG000238747 InParanoid:Q9FNE9 OMA:VICPDRR PhylomeDB:Q9FNE9
ProtClustDB:CLSN2686326 Genevestigator:Q9FNE9 GermOnline:AT5G24330
GO:GO:0046976 Uniprot:Q9FNE9
Length = 349
Score = 138 (53.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 316 DCGCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKR 366
D C C+ P KL++C++C +H++CL+P L SVP+ WFCPSC +
Sbjct: 32 DTVCEECSSGKQPAKLLLCDKCDKGFHLFCLRPILVSVPKGS-WFCPSCSK 81
Score = 40 (19.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 12/48 (25%), Positives = 19/48 (39%)
Query: 706 CVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKSCLETHSNDALQSIL 753
C+ C D + S N P RK+ N C+ + N + +L
Sbjct: 274 CL-VICPDRRSNIARFISGINNHSPEGRKKQNLKCVRFNINGEARVLL 320
>SGD|S000003880 [details] [associations]
symbol:JHD2 "JmjC domain family histone demethylase specific
for H3-K4" species:4932 "Saccharomyces cerevisiae" [GO:0032453
"histone demethylase activity (H3-K4 specific)" evidence=IDA;IMP]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0016577 "histone demethylation" evidence=IDA;IMP] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 SGD:S000003880
GO:GO:0005634 GO:GO:0005737 EMBL:BK006943 GO:GO:0046872
GO:GO:0008270 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
EMBL:Z49619 EMBL:Z49620 PIR:S57142 RefSeq:NP_012653.1
ProteinModelPortal:P47156 SMR:P47156 DIP:DIP-4835N IntAct:P47156
MINT:MINT-537060 STRING:P47156 PaxDb:P47156 EnsemblFungi:YJR119C
GeneID:853583 KEGG:sce:YJR119C CYGD:YJR119c HOGENOM:HOG000113131
OMA:RNISGMT OrthoDB:EOG44N21B NextBio:974376 Genevestigator:P47156
GermOnline:YJR119C GO:GO:0032453 Uniprot:P47156
Length = 728
Score = 136 (52.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 301 PECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWF 360
P+ + +D E D C +C P + I+C+ C +HI+CL PPLE VP D W
Sbjct: 222 PDSNSGSDFEEDD--DDACIVCRKTNDPKRTILCDSCDKPFHIYCLSPPLERVPSGD-WI 278
Query: 361 CPSC 364
C +C
Sbjct: 279 CNTC 282
Score = 52 (23.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 16/61 (26%), Positives = 24/61 (39%)
Query: 355 EDDEW--FCPSCKRDTSEVIAPGQKLKDSKKKARMASTNSKSTRDWGKGMACVGRTKV-C 411
ED+E+ FC CK S + DS + + N S R W + + + C
Sbjct: 622 EDEEYDIFCSQCKTICSIAFVLRKNNYDSIRTYKRHKKNHLSIRQWNELSTTDSKVSILC 681
Query: 412 T 412
T
Sbjct: 682 T 682
>UNIPROTKB|H7C212 [details] [associations]
symbol:MLL3 "Histone-lysine N-methyltransferase MLL3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 EMBL:AC005631 EMBL:AC006017 EMBL:AC104692
HGNC:HGNC:13726 ChiTaRS:MLL3 EMBL:AC006474
ProteinModelPortal:H7C212 Ensembl:ENST00000418673 Uniprot:H7C212
Length = 228
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 314 CKDCG-CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSC 364
C +C C C T P +L++C++C YH +CL PPL++VP+ W C C
Sbjct: 160 CLECTVCEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGG-WKCKWC 210
>POMBASE|SPBP19A11.06 [details] [associations]
symbol:lid2 "Lid2 complex subunit, predicted histone
demethylase Lid2" species:4896 "Schizosaccharomyces pombe"
[GO:0000070 "mitotic sister chromatid segregation" evidence=IMP]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0019787 "small conjugating protein ligase
activity" evidence=ISM] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0031507 "heterochromatin
assembly" evidence=IMP] [GO:0031618 "nuclear centromeric
heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
heterochromatin" evidence=IDA] [GO:0034630 "RITS complex
localization" evidence=IMP] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=IDA] [GO:0048189
"Lid2 complex" evidence=IDA] [GO:0051567 "histone H3-K9
methylation" evidence=IMP] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=IMP] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51011 PROSITE:PS51184
SMART:SM00184 SMART:SM00249 SMART:SM00558 PomBase:SPBP19A11.06
Prosite:PS00518 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
GO:GO:0008270 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0030466
GO:GO:0030702 GO:GO:0000070 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0031934 GO:GO:0051567
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0048189 GO:GO:0019787
GO:GO:0031507 GO:GO:0051572 GO:GO:0031618 PROSITE:PS51183
GO:GO:0034630 eggNOG:NOG327026 GO:GO:0034647 OrthoDB:EOG44N21B
KO:K11446 PIR:T50313 RefSeq:NP_596174.1 ProteinModelPortal:Q9HDV4
IntAct:Q9HDV4 STRING:Q9HDV4 EnsemblFungi:SPBP19A11.06.1
GeneID:2541299 KEGG:spo:SPBP19A11.06 OMA:LPCVIRE NextBio:20802409
Uniprot:Q9HDV4
Length = 1513
Score = 144 (55.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 39/146 (26%), Positives = 68/146 (46%)
Query: 258 LENCKIKFVKELYKIESPKLLAERTAEDEDHMSTEPKTLRQI--VPECTTCNDVETKHCK 315
L C +++K + SP ++R+ + + +Q +PE + + V+T
Sbjct: 196 LTRCYDRYIKPFERDSSPSFKSKRSESSTRKIRNTRSSAQQESPIPETSAQSPVQTIQVN 255
Query: 316 ----------DCG--CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPS 363
+ G C C +P+ +++C+ C+ YH CL PPL S+P++D W+C +
Sbjct: 256 GSTSLKRPLIERGEQCEYCGLDKNPETILLCDGCEAAYHTSCLDPPLTSIPKED-WYCDA 314
Query: 364 CKRDTSEVIA-PGQKLKDSKKKARMA 388
CK + S+ G K K S K R A
Sbjct: 315 CKFNISDYDPRKGFKWKLSSLKERSA 340
Score = 51 (23.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 23/78 (29%), Positives = 36/78 (46%)
Query: 628 RKVSSETLGESKVKKSKQ-VYT---LPSSVLEHINNDTVHSNVWDEIKALCKEGQKEVLE 683
R+ S ++ G ++K K ++ LP S + I + H W K L K +K++ +
Sbjct: 1078 RETSPDSEGRLTIRKKKGCIFCFCRLPESGVM-IECEICHE--WYHAKCL-KMSKKKLRQ 1133
Query: 684 HIQEKFLCIICQELVYKP 701
EKF C IC V P
Sbjct: 1134 --DEKFTCPICDYRVEIP 1149
Score = 37 (18.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 674 CKEGQKEVLEHIQEKFLCIICQE 696
C E+ + + KF C IC E
Sbjct: 1381 CVGLNNEIADSVS-KFTCPICME 1402
>DICTYBASE|DDB_G0280755 [details] [associations]
symbol:ubqB "ubiquitin/ribosomal protein L40 fusion
protein" species:44689 "Dictyostelium discoideum" [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000626
InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020 SMART:SM00213
dictyBase:DDB_G0280755 Prosite:PS00299 GO:GO:0005634
GenomeReviews:CM000152_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 InterPro:IPR019956 PRINTS:PR00348 EMBL:AAFI02000038
KO:K02927 OMA:QKYNCEK EMBL:X07210 EMBL:M23749 EMBL:X04702
PIR:S00357 RefSeq:XP_641020.1 ProteinModelPortal:P14794
STRING:P14794 PRIDE:P14794 EnsemblProtists:DDB0214925
GeneID:8622722 KEGG:ddi:DDB_G0280755 ProtClustDB:CLSZ2456930
Uniprot:P14794
Length = 128
Score = 114 (45.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>UNIPROTKB|D6RAS2 [details] [associations]
symbol:TRIM60 "Tripartite motif-containing protein 60"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000234133 HGNC:HGNC:21162
EMBL:AC106872 IPI:IPI00967237 ProteinModelPortal:D6RAS2 SMR:D6RAS2
Ensembl:ENST00000507119 ArrayExpress:D6RAS2 Bgee:D6RAS2
Uniprot:D6RAS2
Length = 90
Score = 114 (45.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 682 LEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCR 733
L ++QE+ C IC E + P+T++C H FC CL ++K + D CP CR
Sbjct: 7 LVNLQEESSCPICLEYLKDPVTINCGHNFCRSCLSVSWK-DLDDTFPCPVCR 57
>UNIPROTKB|A4QND0 [details] [associations]
symbol:ubl4a "Ubiquitin-like protein 4A" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005829 "cytosol" evidence=ISS]
[GO:0071816 "tail-anchored membrane protein insertion into ER
membrane" evidence=ISS] [GO:0071818 "BAT3 complex" evidence=ISS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0006810 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0071818
GO:GO:0071816 InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348
GeneTree:ENSGT00700000104456 HOVERGEN:HBG072205 CTD:8266
HOGENOM:HOG000006827 OMA:MEKGFSK eggNOG:NOG265285 EMBL:BC135438
RefSeq:NP_001096510.1 UniGene:Str.7441 ProteinModelPortal:A4QND0
SMR:A4QND0 STRING:A4QND0 Ensembl:ENSXETT00000015581
GeneID:100125140 KEGG:xtr:100125140 Xenbase:XB-GENE-6455973
Bgee:A4QND0 Uniprot:A4QND0
Length = 148
Score = 114 (45.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 24/76 (31%), Positives = 44/76 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G + + V T+++ +K +E L VPV +QRL ++GK L DE+ L Y
Sbjct: 1 MQLTVKALKGKEANIQVSEGDTVLA-VKRLVEEKLKVPVSQQRLLFRGKALADEHCLAHY 59
Query: 61 NVNLNDVIQLMIKADI 76
++ + LM+K +
Sbjct: 60 SIGPGSRLNLMVKEQV 75
>UNIPROTKB|F1MWC1 [details] [associations]
symbol:DPF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
Gene3D:3.30.160.60 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 EMBL:DAAA02046989 EMBL:DAAA02046990
EMBL:DAAA02046991 EMBL:DAAA02046992 IPI:IPI01024694
Ensembl:ENSBTAT00000009493 ArrayExpress:F1MWC1 Uniprot:F1MWC1
Length = 387
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 314 CKDC-GCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTSE 370
C +C CS+C + D+L+ C++C YH++CL PP+ PE W C C R E
Sbjct: 322 CIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGS-WSCHLCLRHLKE 378
>MGI|MGI:1352748 [details] [associations]
symbol:Dpf1 "D4, zinc and double PHD fingers family 1"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=ISO;IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IDA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
MGI:MGI:1352748 GO:GO:0005737 GO:GO:0007399 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0003676
Gene3D:3.30.160.60 GO:GO:0071565 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 CTD:8193 HOVERGEN:HBG004475 InterPro:IPR025750
Pfam:PF14051 eggNOG:NOG271547 HOGENOM:HOG000217918
OrthoDB:EOG4T4CX1 EMBL:U48238 EMBL:U48239 EMBL:AF108133
IPI:IPI00134511 IPI:IPI00227453 IPI:IPI00227454 RefSeq:NP_038902.1
UniGene:Mm.101885 UniGene:Mm.453136 UniGene:Mm.453137
ProteinModelPortal:Q9QX66 SMR:Q9QX66 STRING:Q9QX66
PhosphoSite:Q9QX66 PRIDE:Q9QX66 Ensembl:ENSMUST00000049977
Ensembl:ENSMUST00000065181 GeneID:29861 KEGG:mmu:29861
GeneTree:ENSGT00530000063194 NextBio:307066 Bgee:Q9QX66
CleanEx:MM_DPF1 Genevestigator:Q9QX66 GermOnline:ENSMUSG00000030584
Uniprot:Q9QX66
Length = 387
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 314 CKDC-GCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTSE 370
C +C CS+C + D+L+ C++C YH++CL PP+ PE W C C R E
Sbjct: 322 CIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGS-WSCHLCLRHLKE 378
>UNIPROTKB|F1MED1 [details] [associations]
symbol:DPF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0007399 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.160.60 GO:GO:0071565 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR025750 Pfam:PF14051 OMA:HAPGQLY
GeneTree:ENSGT00530000063194 EMBL:DAAA02046989 EMBL:DAAA02046990
EMBL:DAAA02046991 EMBL:DAAA02046992 IPI:IPI01024694
Ensembl:ENSBTAT00000054713 ArrayExpress:F1MED1 Uniprot:F1MED1
Length = 388
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 314 CKDC-GCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTSE 370
C +C CS+C + D+L+ C++C YH++CL PP+ PE W C C R E
Sbjct: 323 CIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGS-WSCHLCLRHLKE 379
>UNIPROTKB|J3KQY6 [details] [associations]
symbol:DPF1 "Zinc finger protein neuro-d4" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
Gene3D:3.30.160.60 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
EMBL:AC011479 HGNC:HGNC:20225 ProteinModelPortal:J3KQY6
Ensembl:ENST00000456296 Uniprot:J3KQY6
Length = 388
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 314 CKDC-GCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTSE 370
C +C CS+C + D+L+ C++C YH++CL PP+ PE W C C R E
Sbjct: 323 CIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGS-WSCHLCLRHLKE 379
>ZFIN|ZDB-GENE-041014-190 [details] [associations]
symbol:dpf3 "D4, zinc and double PHD fingers,
family 3" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0042393 "histone binding" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;IMP] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0048644 "muscle organ morphogenesis" evidence=IMP] [GO:0016568
"chromatin modification" evidence=IEA;ISS] [GO:0055008 "cardiac
muscle tissue morphogenesis" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028
PROSITE:PS50016 PROSITE:PS50157 SMART:SM00184 SMART:SM00249
ZFIN:ZDB-GENE-041014-190 GO:GO:0007399 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016514
GO:GO:0055008 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0042393
HOVERGEN:HBG004475 InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
HOGENOM:HOG000217918 GeneTree:ENSGT00530000063194 CTD:8110
EMBL:EU245032 EMBL:BX255881 IPI:IPI00488271 RefSeq:NP_001104639.1
UniGene:Dr.81131 ProteinModelPortal:A9LMC0 STRING:A9LMC0
Ensembl:ENSDART00000123387 GeneID:562738 KEGG:dre:562738
InParanoid:Q5RIJ2 OMA:AEVEPRS OrthoDB:EOG49KFR1 NextBio:20884558
Bgee:A9LMC0 Uniprot:A9LMC0
Length = 391
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 314 CKDC-GCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCK 365
C +C CS+C + D+L+ C++C YH++CLKPP+ PE W C C+
Sbjct: 327 CIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLKPPMTQPPEGS-WSCHLCQ 378
>UNIPROTKB|I3L6G5 [details] [associations]
symbol:DPF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0007399 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.160.60 GO:GO:0071565 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR025750 Pfam:PF14051 OMA:HAPGQLY
GeneTree:ENSGT00530000063194 EMBL:FP565378
Ensembl:ENSSSCT00000025066 Uniprot:I3L6G5
Length = 417
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 314 CKDC-GCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTSE 370
C +C CS+C + D+L+ C++C YH++CL PP+ PE W C C R E
Sbjct: 352 CIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGS-WSCHLCLRHLKE 408
>UNIPROTKB|Q30DN6 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 EMBL:DQ156494 RefSeq:NP_001106929.1 UniGene:Cfa.38975
ProteinModelPortal:Q30DN6 SMR:Q30DN6 GeneID:100134936
KEGG:cfa:100134936 CTD:8284 NextBio:20789320 Uniprot:Q30DN6
Length = 1545
Score = 142 (55.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 35/94 (37%), Positives = 44/94 (46%)
Query: 277 LLAERTAEDEDHMSTEPKT-LRQIVPECTTCNDVETKHCK----DCG-CSICAGKTSPDK 330
L+ E EDE MS+ P+ L V CT H D C IC+ DK
Sbjct: 272 LMKEEPREDERVMSSLPREDLSHSVEPCTKMTMQLRTHSSAQFIDLYVCRICSRGDEDDK 331
Query: 331 LIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSC 364
L++C+ C YHI+CL PPL +P W CP C
Sbjct: 332 LLLCDGCDDTYHIFCLIPPLPEIPRG-VWRCPKC 364
>UNIPROTKB|F1M516 [details] [associations]
symbol:F1M516 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000626
InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599 SMART:SM00213
Prosite:PS00299 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 GeneTree:ENSGT00550000074763
IPI:IPI00561205 Ensembl:ENSRNOT00000036265 Uniprot:F1M516
Length = 158
Score = 115 (45.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 28/91 (30%), Positives = 50/91 (54%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
+ + +++L G K +L + I D+K +I++ +P D+QRL + GKQ ED L DY
Sbjct: 7 LQIFVKALPG-KTIMLEVEPSDTIEDVKAKIQDKEGIPPDQQRLIFAGKQPEDG-RLSDY 64
Query: 61 NVNLNDVIQLMI-KADIDKNYQSSESSSKEN 90
N+ + L++ + D K + S + K+N
Sbjct: 65 NIQKESTLHLVLSRRDAAKKRKKSYTIPKKN 95
>UNIPROTKB|H3BPZ9 [details] [associations]
symbol:RNF166 "RING finger protein 166" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC138028 HGNC:HGNC:28856 ChiTaRS:RNF166
Ensembl:ENST00000562544 Bgee:H3BPZ9 Uniprot:H3BPZ9
Length = 148
Score = 112 (44.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 22/70 (31%), Positives = 40/70 (57%)
Query: 685 IQEKFLCIICQELVYKPITL-DCVHTFCHDCLKRAFKIESDACNSC--PYCRKEMNKSCL 741
++ ++ C IC E+ ++P+ + C HTFC +CL+ ++ S C C P+ K+++K+
Sbjct: 6 LEAQYTCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPSPLCPLCRLPFDPKKVDKA-- 63
Query: 742 ETHSNDALQS 751
TH L S
Sbjct: 64 -THVEKQLSS 72
>UNIPROTKB|J9P712 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907
GeneTree:ENSGT00530000063661 EMBL:AAEX03011329
Ensembl:ENSCAFT00000046673 Uniprot:J9P712
Length = 1626
Score = 142 (55.0 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSC 364
C +C D+L++C+ C YH+ CL PPL+ VP D EWFCP C
Sbjct: 182 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVD-EWFCPEC 226
Score = 51 (23.0 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 21/58 (36%), Positives = 25/58 (43%)
Query: 442 VHRPHVSGIH-GREDVGAFSLVLSGG-YEDDVDDGDSFLYTGSGGRDLSGNKRTSVQS 497
VH+P + R D+GA SL L G YE D D T LS +R QS
Sbjct: 406 VHKPAEPSLGLMRADIGAASLSLFGDPYELDPFDSSEDQSTNPAS-PLSAKRRVLSQS 462
Score = 41 (19.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 362 PSCKRDTSEVIAPGQKLKDSKKKA 385
PSC R TS + G+K K +K+A
Sbjct: 983 PSCSRSTSS--SRGRK-KAKRKRA 1003
>UNIPROTKB|F1PXY6 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 OMA:YMKKLHM
GeneTree:ENSGT00530000063661 EMBL:AAEX03011329
Ensembl:ENSCAFT00000010559 Uniprot:F1PXY6
Length = 1637
Score = 142 (55.0 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSC 364
C +C D+L++C+ C YH+ CL PPL+ VP D EWFCP C
Sbjct: 191 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVD-EWFCPEC 235
Score = 51 (23.0 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 21/58 (36%), Positives = 25/58 (43%)
Query: 442 VHRPHVSGIH-GREDVGAFSLVLSGG-YEDDVDDGDSFLYTGSGGRDLSGNKRTSVQS 497
VH+P + R D+GA SL L G YE D D T LS +R QS
Sbjct: 418 VHKPAEPSLGLMRADIGAASLSLFGDPYELDPFDSSEDQSTNPAS-PLSAKRRVLSQS 474
Score = 41 (19.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 362 PSCKRDTSEVIAPGQKLKDSKKKA 385
PSC R TS + G+K K +K+A
Sbjct: 995 PSCSRSTSS--SRGRK-KAKRKRA 1015
>UNIPROTKB|H0YDG9 [details] [associations]
symbol:RSF1 "Remodeling and spacing factor 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 EMBL:AP000580
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 EMBL:AP000609
EMBL:AP002343 HGNC:HGNC:18118 ChiTaRS:RSF1 Ensembl:ENST00000531026
Bgee:H0YDG9 Uniprot:H0YDG9
Length = 276
Score = 130 (50.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCK 365
C C P+ +++C+ C YH CL+PPL +P D EWFCP C+
Sbjct: 3 CKKCGLPNHPELILLCDSCDSGYHTACLRPPLMIIP-DGEWFCPPCQ 48
>ZFIN|ZDB-GENE-041024-2 [details] [associations]
symbol:dpf2 "D4, zinc and double PHD fingers family
2" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
ZFIN:ZDB-GENE-041024-2 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 HOVERGEN:HBG004475 InterPro:IPR025750 Pfam:PF14051
CTD:5977 KO:K13196 EMBL:BC083281 IPI:IPI00483161
RefSeq:NP_001007153.1 UniGene:Dr.37136 ProteinModelPortal:Q5XJL8
PRIDE:Q5XJL8 GeneID:474324 KEGG:dre:474324 InParanoid:Q5XJL8
NextBio:20850390 ArrayExpress:Q5XJL8 Bgee:Q5XJL8 Uniprot:Q5XJL8
Length = 400
Score = 133 (51.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 314 CKDCGC-SICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSC 364
C +C C +IC + D+L+ C++C YH++CL PP+ SVP + W C C
Sbjct: 331 CIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLSPPM-SVPPEGSWSCHLC 381
>ZFIN|ZDB-GENE-030131-5379 [details] [associations]
symbol:kdm5ba "lysine (K)-specific demethylase
5Ba" species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030131-5379 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CR628365 IPI:IPI00636517
Ensembl:ENSDART00000058729 ArrayExpress:F1R3Y4 Bgee:F1R3Y4
Uniprot:F1R3Y4
Length = 1483
Score = 134 (52.2 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSC 364
C +C G D+L++C+ C YH +CL PPL VP+ D W CP C
Sbjct: 280 CLVCGGGGDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPKC 324
Score = 53 (23.7 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 19/83 (22%), Positives = 35/83 (42%)
Query: 55 YMLFDYNVNLNDVIQLMIKADI-DKNYQSSESSSKENIQPNGPACKPNINTENASSSGNN 113
Y LF NL + + + D DK Y+ + ++++QP C +
Sbjct: 158 YYLFQTGANLMNSQKPTLTNDTKDKEYKPHDLPQRQSVQPV-ETCTIARRAKRTEGRCFK 216
Query: 114 TEPEDFVDLKPADSQYYKVGDYV 136
+EP + + KP + ++G YV
Sbjct: 217 SEPGEVCENKP--NLRRRMGSYV 237
Score = 51 (23.0 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 625 NLKRKVSSE-TLGESKVKKSKQVYTLPSSVLEHINNDTVHSNVWDEIKAL-CKEGQKEVL 682
N KR++ E T G+ + K K+ T PS+ L +N W A C++ + +
Sbjct: 1380 NSKRRLEKEITEGQYRDKIKKKRTTSPSNSLSDPSNSDDSEEDWSVCSAKRCQQPEGNEV 1439
Query: 683 EHIQ 686
+Q
Sbjct: 1440 NWVQ 1443
>FB|FBgn0033015 [details] [associations]
symbol:d4 "d4" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 EMBL:AE013599 GO:GO:0046872 GO:GO:0008270
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 HSSP:Q14839 KO:K13196 UniGene:Dm.487
GeneID:35485 KEGG:dme:Dmel_CG2682 CTD:35485 FlyBase:FBgn0033015
GenomeRNAi:35485 NextBio:793658 EMBL:AY058600 EMBL:AF427473
RefSeq:NP_610163.1 SMR:Q7K3G5 DIP:DIP-18634N IntAct:Q7K3G5
STRING:Q7K3G5 EnsemblMetazoa:FBtr0086082 UCSC:CG2682-RA
InParanoid:Q7K3G5 OMA:SYDKTSS Uniprot:Q7K3G5
Length = 497
Score = 134 (52.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 314 CKDCG-CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTSEV 371
C +C CSIC + D+L+ C++C YH++CL PPL + PE W C C + ++
Sbjct: 439 CIECKYCSICGTSDNDDQLLFCDDCDRGYHMYCLSPPLVTPPEGS-WSCKLCMEEFHKI 496
>UNIPROTKB|Q92782 [details] [associations]
symbol:DPF1 "Zinc finger protein neuro-d4" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007399
"nervous system development" evidence=ISS] [GO:0071565 "nBAF
complex" evidence=ISS] [GO:0006917 "induction of apoptosis"
evidence=TAS] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 GO:GO:0005737 GO:GO:0007399 GO:GO:0006917
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 EMBL:CH471126
GO:GO:0006351 GO:GO:0071565 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 CTD:8193
HOVERGEN:HBG004475 InterPro:IPR025750 Pfam:PF14051 EMBL:AK094632
EMBL:DA076421 EMBL:AC011479 EMBL:BC125153 EMBL:U43843
IPI:IPI00216452 IPI:IPI00291761 IPI:IPI00642063
RefSeq:NP_001128627.1 RefSeq:NP_001128628.1 RefSeq:NP_004638.2
UniGene:Hs.631576 ProteinModelPortal:Q92782 SMR:Q92782
IntAct:Q92782 MINT:MINT-4302537 STRING:Q92782 PhosphoSite:Q92782
DMDM:2500145 PRIDE:Q92782 Ensembl:ENST00000412732
Ensembl:ENST00000414789 Ensembl:ENST00000420980
Ensembl:ENST00000437720 GeneID:8193 KEGG:hsa:8193 UCSC:uc002ohl.3
UCSC:uc002ohm.3 UCSC:uc002ohn.3 GeneCards:GC19M038701
HGNC:HGNC:20225 HPA:HPA049148 MIM:601670 neXtProt:NX_Q92782
PharmGKB:PA134879894 eggNOG:NOG271547 HOGENOM:HOG000217918
InParanoid:Q92782 OMA:HAPGQLY OrthoDB:EOG4T4CX1 GenomeRNAi:8193
NextBio:30890 ArrayExpress:Q92782 Bgee:Q92782 CleanEx:HS_DPF1
Genevestigator:Q92782 GermOnline:ENSG00000011332 Uniprot:Q92782
Length = 380
Score = 132 (51.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 30/83 (36%), Positives = 42/83 (50%)
Query: 288 HMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHYYHIWCLK 347
+M+ +T R EC +C+ T D G S AG T D+L+ C++C YH++CL
Sbjct: 293 NMTAAVRTYRWQCIECKSCSLCGTSE-ND-GAS-WAGLTPQDQLLFCDDCDRGYHMYCLS 349
Query: 348 PPLESVPEDDEWFCPSCKRDTSE 370
PP+ PE W C C R E
Sbjct: 350 PPMAEPPEGS-WSCHLCLRHLKE 371
>UNIPROTKB|I3LU11 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00109 SMART:SM00184 SMART:SM00249
Prosite:PS00518 GO:GO:0035556 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 OMA:YMKKLHM
GeneTree:ENSGT00530000063661 EMBL:FP015900
Ensembl:ENSSSCT00000024857 Uniprot:I3LU11
Length = 1643
Score = 144 (55.7 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSC 364
C +C D+L++C+ C YH+ CL+PPL+ VP D EWFCP C
Sbjct: 185 CEVCGRSDREDRLLLCDGCDAGYHMECLEPPLQEVPVD-EWFCPEC 229
Score = 48 (22.0 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 14/54 (25%), Positives = 28/54 (51%)
Query: 365 KRDTSEVIAPGQKLKDSKKKARMASTNSKSTRDWGKGMACVGRTKVCTIVPSDH 418
+R +S+ + ++ K +KKA+ A + + WG+G R++ C+ S H
Sbjct: 1041 RRSSSDRSSSHERAK--RKKAK-AKSRERRRGSWGRGRRR-SRSRSCSPGSSSH 1090
Score = 38 (18.4 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 7/37 (18%), Positives = 18/37 (48%)
Query: 373 APGQKLKDSKKKARMASTNSKSTRDWGKGMACVGRTK 409
AP ++ + + ++ ++ +R KG +C R +
Sbjct: 333 APARRRRRTGRRKKVPGRKKSQSRPSAKGKSCGTRLR 369
>RGD|61868 [details] [associations]
symbol:Dpf1 "D4, zinc and double PHD fingers family 1"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=ISO;ISS;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0071565 "nBAF complex" evidence=ISO;ISS]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR007087
InterPro:IPR013087 InterPro:IPR015880 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016 PROSITE:PS50157
SMART:SM00184 SMART:SM00249 SMART:SM00355 RGD:61868 GO:GO:0005737
GO:GO:0007399 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0003676 Gene3D:3.30.160.60 GO:GO:0071565
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 HOVERGEN:HBG004475
InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
HOGENOM:HOG000217918 OMA:HAPGQLY OrthoDB:EOG4T4CX1
GeneTree:ENSGT00530000063194 EMBL:X66022 IPI:IPI00189797
IPI:IPI00231393 IPI:IPI00231394 IPI:IPI00231395 PIR:S26731
UniGene:Rn.42906 ProteinModelPortal:P56163 STRING:P56163
PRIDE:P56163 Ensembl:ENSRNOT00000028091 Ensembl:ENSRNOT00000046435
UCSC:RGD:61868 InParanoid:P56163 ArrayExpress:P56163
Genevestigator:P56163 GermOnline:ENSRNOG00000020687 Uniprot:P56163
Length = 397
Score = 132 (51.5 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 30/83 (36%), Positives = 42/83 (50%)
Query: 288 HMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHYYHIWCLK 347
+M+ +T R EC +C+ T D G S AG T D+L+ C++C YH++CL
Sbjct: 310 NMTAAVRTYRWQCIECKSCSLCGTSE-ND-GAS-WAGLTPQDQLLFCDDCDRGYHMYCLS 366
Query: 348 PPLESVPEDDEWFCPSCKRDTSE 370
PP+ PE W C C R E
Sbjct: 367 PPMAEPPEGS-WSCHLCLRHLKE 388
>UNIPROTKB|E9PDV3 [details] [associations]
symbol:DPF1 "Zinc finger protein neuro-d4" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
Gene3D:3.30.160.60 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
EMBL:AC011479 HGNC:HGNC:20225 IPI:IPI00926658
ProteinModelPortal:E9PDV3 SMR:E9PDV3 Ensembl:ENST00000416611
ArrayExpress:E9PDV3 Bgee:E9PDV3 Uniprot:E9PDV3
Length = 398
Score = 132 (51.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 30/83 (36%), Positives = 42/83 (50%)
Query: 288 HMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHYYHIWCLK 347
+M+ +T R EC +C+ T D G S AG T D+L+ C++C YH++CL
Sbjct: 311 NMTAAVRTYRWQCIECKSCSLCGTSE-ND-GAS-WAGLTPQDQLLFCDDCDRGYHMYCLS 367
Query: 348 PPLESVPEDDEWFCPSCKRDTSE 370
PP+ PE W C C R E
Sbjct: 368 PPMAEPPEGS-WSCHLCLRHLKE 389
>ZFIN|ZDB-GENE-070912-318 [details] [associations]
symbol:ftr27 "finTRIM family, member 27"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-070912-318 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:KOG2177 OrthoDB:EOG4R23TJ
GeneTree:ENSGT00670000097622 HOVERGEN:HBG106862 EMBL:BX548047
IPI:IPI00862890 UniGene:Dr.88749 Ensembl:ENSDART00000135584
OMA:YESHEES Uniprot:B0S6S1
Length = 171
Score = 119 (46.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 25/85 (29%), Positives = 47/85 (55%)
Query: 686 QEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKE------MNKS 739
Q++F C IC +L+ P+T+ C H++C +C+ + + NSCP CR+ +NK+
Sbjct: 10 QDQFSCSICLDLLKDPVTIPCGHSYCMNCITEYWNRRDLSINSCPQCRQTFTPKPALNKN 69
Query: 740 CLETHSNDALQSI-LSTLFPGYSSA 763
+ + +++I + T+ P S A
Sbjct: 70 VMLAEMVEKVKAIKVQTVDPAPSYA 94
>UNIPROTKB|Q9NRL2 [details] [associations]
symbol:BAZ1A "Bromodomain adjacent to zinc finger domain
protein 1A" species:9606 "Homo sapiens" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008623 "CHRAC" evidence=IDA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=TAS] [GO:0016590 "ACF complex" evidence=TAS] [GO:0004402
"histone acetyltransferase activity" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0006351 "transcription, DNA-dependent" evidence=NAS]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00297 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0006261 GO:GO:0006338 EMBL:CH471078
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 GO:GO:0000228 EMBL:AF213467 EMBL:AF221130
EMBL:AB032252 EMBL:AL121603 EMBL:AL355885 EMBL:AF161435
EMBL:AL050089 IPI:IPI00383565 IPI:IPI00412415 PIR:T08738
RefSeq:NP_038476.2 RefSeq:NP_872589.1 UniGene:Hs.509140
ProteinModelPortal:Q9NRL2 SMR:Q9NRL2 IntAct:Q9NRL2
MINT:MINT-1183777 STRING:Q9NRL2 PhosphoSite:Q9NRL2 DMDM:116241266
PaxDb:Q9NRL2 PRIDE:Q9NRL2 Ensembl:ENST00000358716
Ensembl:ENST00000360310 Ensembl:ENST00000382422 GeneID:11177
KEGG:hsa:11177 UCSC:uc001wsk.3 UCSC:uc001wsl.3 CTD:11177
GeneCards:GC14M035221 H-InvDB:HIX0037904 HGNC:HGNC:960
HPA:HPA002730 MIM:605680 neXtProt:NX_Q9NRL2 PharmGKB:PA25270
HOGENOM:HOG000095179 HOVERGEN:HBG080889 InParanoid:Q9NRL2 KO:K11655
OMA:SSFQNNV OrthoDB:EOG49GKFR PhylomeDB:Q9NRL2 ChiTaRS:BAZ1A
GenomeRNAi:11177 NextBio:42529 ArrayExpress:Q9NRL2 Bgee:Q9NRL2
CleanEx:HS_BAZ1A Genevestigator:Q9NRL2 GermOnline:ENSG00000198604
GO:GO:0016590 GO:GO:0008623 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 InterPro:IPR013136 Pfam:PF02791 Pfam:PF10537
SMART:SM00571 PROSITE:PS50827 PROSITE:PS51136 Uniprot:Q9NRL2
Length = 1556
Score = 136 (52.9 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 311 TKHCKDCGCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCK 365
+K + C IC K + +++C+ C +H +C++P L++VPE D WFCP C+
Sbjct: 1143 SKSILNARCKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKTVPEGD-WFCPECR 1196
Score = 55 (24.4 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 25/113 (22%), Positives = 53/113 (46%)
Query: 192 RPLPKHLITEFNENLIGVRVMGNYNAEEPRERGYWHDMIIEKKQGKRLTTELIATVFIGK 251
RP PK + +N+ + + +Y ++ +ER D ++++++ K L E
Sbjct: 278 RP-PKRIHISQEDNVANKQTLASYRSKATKER----DKLLKQEEMKSLAFEKAKLKREKA 332
Query: 252 KGLETRLENCKIKFVK--ELYKIESPKLLAERTAEDEDHMSTEPKTLRQIVPE 302
LE + + + K K EL KI + L ++ E+++ + E + R+ + E
Sbjct: 333 DALEAKKKEKEDKEKKREELKKIVEEERLKKK--EEKERLKVEREKEREKLRE 383
Score = 44 (20.5 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 18/83 (21%), Positives = 37/83 (44%)
Query: 115 EPEDFVDLKPADSQ-YYKVGDYVDAILETEGAWFESQITHILVDINKEKPYDEDDLIFKV 173
E D ++ K + + K + + I+E E + + + V+ KE+ ++ V
Sbjct: 330 EKADALEAKKKEKEDKEKKREELKKIVEEERLKKKEEKERLKVEREKEREKLREEKRKYV 389
Query: 174 VHLKYKDDGSSTMKFDDIRPLPK 196
+LK M+ DD++ LP+
Sbjct: 390 EYLKQWSKPREDMECDDLKELPE 412
>UNIPROTKB|C9JGA3 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 PROSITE:PS50016
PROSITE:PS51011 SMART:SM00249 SMART:SM00501 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AC010889 HGNC:HGNC:11115 ChiTaRS:KDM5D
IPI:IPI00644852 ProteinModelPortal:C9JGA3 SMR:C9JGA3 STRING:C9JGA3
Ensembl:ENST00000447300 HOGENOM:HOG000174636 ArrayExpress:C9JGA3
Bgee:C9JGA3 Uniprot:C9JGA3
Length = 425
Score = 132 (51.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 286 EDHMSTEP--KTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHYYHI 343
+ H+S EP KT Q+ ++ +++ C+ +C+ DKL+ C+ C YHI
Sbjct: 242 KQHLSLEPCTKTTMQLRKNHSSAQFIDSYICQ-----VCSRGDEDDKLLFCDGCDDNYHI 296
Query: 344 WCLKPPLESVPEDDEWFCPSC 364
+CL PPL +P W CP C
Sbjct: 297 FCLLPPLPEIPRGI-WRCPKC 316
>UNIPROTKB|E9PJJ9 [details] [associations]
symbol:TRIM68 "E3 ubiquitin-protein ligase TRIM68"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC090719 HGNC:HGNC:21161
ChiTaRS:TRIM68 IPI:IPI00977425 ProteinModelPortal:E9PJJ9 SMR:E9PJJ9
Ensembl:ENST00000531101 ArrayExpress:E9PJJ9 Bgee:E9PJJ9
Uniprot:E9PJJ9
Length = 187
Score = 122 (48.0 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 681 VLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACN---SCPYCR 733
++E I E+ C IC + +P+++DC H+FCH CL ++I ++ N +CP CR
Sbjct: 6 LVEAIVEEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCR 61
>UNIPROTKB|A2AAZ4 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL662832 EMBL:AL662795 EMBL:AL773535
EMBL:BX294158 EMBL:CR759928 EMBL:BX927214 EMBL:CR759281
EMBL:BX248580 HGNC:HGNC:10065 IPI:IPI00790609 SMR:A2AAZ4
Ensembl:ENST00000412150 Ensembl:ENST00000418057
Ensembl:ENST00000426676 Ensembl:ENST00000438089
Ensembl:ENST00000440271 Ensembl:ENST00000447542
Ensembl:ENST00000450818 Uniprot:A2AAZ4
Length = 74
Score = 109 (43.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 682 LEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFK-IESDACNSCPYCRK 734
LE++Q + C +C E + +P+ ++C H FC C+ R ++ +E D CP CRK
Sbjct: 20 LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDF--PCPVCRK 71
>UNIPROTKB|A2AAZ5 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOVERGEN:HBG001357 HOGENOM:HOG000234134
EMBL:AL662832 EMBL:AL662795 EMBL:AL773535 EMBL:BX294158
EMBL:CR759928 EMBL:BX927214 EMBL:CR759281 EMBL:BX248580
HGNC:HGNC:10065 IPI:IPI00796458 SMR:A2AAZ5 Ensembl:ENST00000411711
Ensembl:ENST00000416213 Ensembl:ENST00000424571
Ensembl:ENST00000430414 Ensembl:ENST00000453856
Ensembl:ENST00000456425 Ensembl:ENST00000458516 Uniprot:A2AAZ5
Length = 144
Score = 109 (43.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 682 LEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFK-IESDACNSCPYCRK 734
LE++Q + C +C E + +P+ ++C H FC C+ R ++ +E D CP CRK
Sbjct: 20 LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDF--PCPVCRK 71
>UNIPROTKB|E9PJ24 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AP006284 HGNC:HGNC:24351
ChiTaRS:PHRF1 IPI:IPI00978364 Ensembl:ENST00000533464
UCSC:uc010qwe.2 ArrayExpress:E9PJ24 Bgee:E9PJ24 Uniprot:E9PJ24
Length = 1645
Score = 148 (57.2 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 29/71 (40%), Positives = 39/71 (54%)
Query: 294 KTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESV 353
K LR+I E T ++ E C +C D+L++C+ C YH+ CL PPL+ V
Sbjct: 160 KILRKIPVENTKASEEEED---PTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEV 216
Query: 354 PEDDEWFCPSC 364
P D EWFCP C
Sbjct: 217 PVD-EWFCPEC 226
Score = 42 (19.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 453 REDVGAFSLVLSGG-YEDDVDDGDSFLYTGSGGRDLSGNKRTSVQS 497
R D+GA SL L G YE D D L + + LS +R +S
Sbjct: 419 RADIGAASLSLFGDPYELDPFDSSEEL-SANPLSPLSAKRRALSRS 463
Score = 38 (18.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 381 SKKKARMASTNSKSTRDWGK 400
SK K+R +S++ S+R+ K
Sbjct: 1043 SKAKSRRSSSDRSSSRERAK 1062
>UNIPROTKB|F8WEF5 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 EMBL:AP006284
HGNC:HGNC:24351 ChiTaRS:PHRF1 IPI:IPI01013297
Ensembl:ENST00000413872 UCSC:uc009ybz.1 ArrayExpress:F8WEF5
Bgee:F8WEF5 Uniprot:F8WEF5
Length = 1647
Score = 148 (57.2 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 29/71 (40%), Positives = 39/71 (54%)
Query: 294 KTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESV 353
K LR+I E T ++ E C +C D+L++C+ C YH+ CL PPL+ V
Sbjct: 163 KILRKIPVENTKASEEEED---PTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEV 219
Query: 354 PEDDEWFCPSC 364
P D EWFCP C
Sbjct: 220 PVD-EWFCPEC 229
Score = 42 (19.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 453 REDVGAFSLVLSGG-YEDDVDDGD 475
R D+GA SL L G YE D D +
Sbjct: 422 RADIGAASLSLFGDPYELDPFDSE 445
Score = 38 (18.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 381 SKKKARMASTNSKSTRDWGK 400
SK K+R +S++ S+R+ K
Sbjct: 1045 SKAKSRRSSSDRSSSRERAK 1064
>UNIPROTKB|Q9P1Y6 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0070063 "RNA polymerase binding" evidence=ISS]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0006366
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 InterPro:IPR017907 EMBL:AP006284
PharmGKB:PA164718737 HSSP:Q9UIG0 EMBL:AB040975 EMBL:BC004950
EMBL:BC013381 EMBL:BC029651 EMBL:BC041631 EMBL:BC136615
EMBL:BC144293 EMBL:BC146771 IPI:IPI00001813 IPI:IPI00827706
IPI:IPI00942878 RefSeq:NP_065952.2 UniGene:Hs.325838
ProteinModelPortal:Q9P1Y6 SMR:Q9P1Y6 IntAct:Q9P1Y6 STRING:Q9P1Y6
PhosphoSite:Q9P1Y6 DMDM:296439275 PaxDb:Q9P1Y6 PRIDE:Q9P1Y6
Ensembl:ENST00000264555 Ensembl:ENST00000416188
Ensembl:ENST00000534320 GeneID:57661 KEGG:hsa:57661 UCSC:uc001lqe.3
UCSC:uc010qwc.2 CTD:57661 GeneCards:GC11P000567 H-InvDB:HIX0201594
HGNC:HGNC:24351 HPA:HPA019867 MIM:611780 neXtProt:NX_Q9P1Y6
PharmGKB:PA164724459 eggNOG:NOG300312 HOVERGEN:HBG108250
InParanoid:Q9P1Y6 OMA:YMKKLHM OrthoDB:EOG4MSD0F ChiTaRS:PHRF1
GenomeRNAi:57661 NextBio:64425 ArrayExpress:Q9P1Y6 Bgee:Q9P1Y6
CleanEx:HS_PHRF1 Genevestigator:Q9P1Y6 GO:GO:0070063 Uniprot:Q9P1Y6
Length = 1649
Score = 148 (57.2 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 29/71 (40%), Positives = 39/71 (54%)
Query: 294 KTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESV 353
K LR+I E T ++ E C +C D+L++C+ C YH+ CL PPL+ V
Sbjct: 164 KILRKIPVENTKASEEEED---PTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEV 220
Query: 354 PEDDEWFCPSC 364
P D EWFCP C
Sbjct: 221 PVD-EWFCPEC 230
Score = 42 (19.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 453 REDVGAFSLVLSGG-YEDDVDDGDSFLYTGSGGRDLSGNKRTSVQS 497
R D+GA SL L G YE D D L + + LS +R +S
Sbjct: 423 RADIGAASLSLFGDPYELDPFDSSEEL-SANPLSPLSAKRRALSRS 467
Score = 38 (18.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 381 SKKKARMASTNSKSTRDWGK 400
SK K+R +S++ S+R+ K
Sbjct: 1047 SKAKSRRSSSDRSSSRERAK 1066
>UNIPROTKB|P62972 [details] [associations]
symbol:P62972 "Polyubiquitin" species:8355 "Xenopus laevis"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000626
Pfam:PF00240 SMART:SM00213 Prosite:PS00299 GO:GO:0005634
GO:GO:0005737 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 PDB:2KDE PDBsum:2KDE EMBL:M11512
UniGene:Xl.4135 PDB:2K39 PDBsum:2K39 IntAct:P62972
MINT:MINT-5210721 EvolutionaryTrace:P62972 Uniprot:P62972
Length = 167
Score = 117 (46.2 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 92 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 150
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 151 NIQKESTLHLVLR 163
Score = 117 (46.2 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 16 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 74
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 75 NIQKESTLHLVLR 87
>MGI|MGI:2141847 [details] [associations]
symbol:Phrf1 "PHD and ring finger domains 1" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070063 "RNA polymerase binding" evidence=ISO]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00109 SMART:SM00184 SMART:SM00249
MGI:MGI:2141847 Prosite:PS00518 GO:GO:0005634 GO:GO:0035556
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0006366
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 InterPro:IPR017907 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM ChiTaRS:PHRF1
GO:GO:0070063 EMBL:AC108908 EMBL:AC163434 EMBL:BC094566
EMBL:BC138446 EMBL:BC145719 EMBL:AK129387 IPI:IPI00881116
IPI:IPI00881246 RefSeq:NP_001074587.1 UniGene:Mm.248656
ProteinModelPortal:A6H619 SMR:A6H619 STRING:A6H619 PRIDE:A6H619
Ensembl:ENSMUST00000106027 Ensembl:ENSMUST00000122143 GeneID:101471
KEGG:mmu:101471 UCSC:uc009kkb.1 UCSC:uc009kkc.1
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 InParanoid:Q505G1
NextBio:354944 Bgee:A6H619 Genevestigator:A6H619 Uniprot:A6H619
Length = 1682
Score = 149 (57.5 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 39/119 (32%), Positives = 57/119 (47%)
Query: 294 KTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESV 353
K L++I E T + E + C +C D+L++C+ C YH+ CL PPL+ V
Sbjct: 165 KILKKIPVENTKACEAEEED--PTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEV 222
Query: 354 PEDDEWFCPSCKR---DTSEVIAPGQKLKDSKKKARMASTNSKSTRDWGKGMACVGRTK 409
P D EWFCP C D + AP + S A + T S+ G+ A + RT+
Sbjct: 223 PVD-EWFCPECTVPGVDPTHDAAPVSDEEVSLLLADVVPTTSRLRPRVGRTRA-IARTR 279
Score = 41 (19.5 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 453 REDVGAFSLVLSGG-YEDDVDDGD 475
R D+GA SL L G YE D D +
Sbjct: 425 RADIGAASLSLFGDPYELDPFDSN 448
>UNIPROTKB|A2AE50 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL662832
EMBL:AL844220 EMBL:BX927221 EMBL:CR759838 EMBL:CR788282
EMBL:BX248419 EMBL:CR388382 EMBL:BX927189 HGNC:HGNC:12962
EMBL:AL662782 EMBL:AL671855 EMBL:AL845450 IPI:IPI00642517
SMR:A2AE50 Ensembl:ENST00000427612 Ensembl:ENST00000429583
Ensembl:ENST00000431641 Ensembl:ENST00000434785
Ensembl:ENST00000435387 Ensembl:ENST00000440149
Ensembl:ENST00000445457 Ensembl:ENST00000447942
HOGENOM:HOG000060139 HOVERGEN:HBG084408 Uniprot:A2AE50
Length = 122
Score = 108 (43.1 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 20/57 (35%), Positives = 29/57 (50%)
Query: 682 LEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNK 738
L ++E+ C IC + + P+T+DC H FC C I S + CP C+K K
Sbjct: 7 LRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPI-SGSRPVCPLCKKPFKK 62
>UNIPROTKB|F5GZ39 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC126309 HGNC:HGNC:12468
ChiTaRS:UBC IPI:IPI01015016 ProteinModelPortal:F5GZ39 SMR:F5GZ39
Ensembl:ENST00000542416 ArrayExpress:F5GZ39 Bgee:F5GZ39
Uniprot:F5GZ39
Length = 61
Score = 108 (43.1 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NV 62
N+
Sbjct: 60 NI 61
>UNIPROTKB|F8WD60 [details] [associations]
symbol:RNF168 "E3 ubiquitin-protein ligase RNF168"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC092933 EMBL:AC117490 HGNC:HGNC:26661 IPI:IPI00925077
ProteinModelPortal:F8WD60 SMR:F8WD60 Ensembl:ENST00000437070
ArrayExpress:F8WD60 Bgee:F8WD60 Uniprot:F8WD60
Length = 116
Score = 108 (43.1 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 23/79 (29%), Positives = 41/79 (51%)
Query: 679 KEVLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNK 738
K+ + + E C IC E++ +P+TL C HT C C + + ++ C CP+CR+ ++
Sbjct: 5 KDAIPSLSE-CQCGICMEILVEPVTLPCNHTLCKPCFQSTVE-KASLC--CPFCRRRVSS 60
Query: 739 -SCLETHSNDALQSILSTL 756
+ T N + L T+
Sbjct: 61 WTRYHTRRNSLVNVELWTI 79
>UNIPROTKB|E1BX13 [details] [associations]
symbol:E1BX13 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104222 EMBL:AADN02028620 IPI:IPI00572796
Ensembl:ENSGALT00000034340 OMA:VEPMRIC Uniprot:E1BX13
Length = 469
Score = 131 (51.2 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 683 EH-IQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKSCL 741
EH ++E+ C IC EL +P+ LDC+H +C C++R + SCP CR++ +
Sbjct: 7 EHSLREELTCAICCELFSQPVMLDCMHHYCKACIQR-YWASGPRVASCPQCRRQFPRPTF 65
Query: 742 ETH 744
TH
Sbjct: 66 RTH 68
>UNIPROTKB|I3LNG0 [details] [associations]
symbol:I3LNG0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001965 InterPro:IPR007087
InterPro:IPR015880 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028
PROSITE:PS50016 PROSITE:PS50157 SMART:SM00249 SMART:SM00355
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
GeneTree:ENSGT00530000063194 Ensembl:ENSSSCT00000027540
Uniprot:I3LNG0
Length = 314
Score = 128 (50.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 28/95 (29%), Positives = 43/95 (45%)
Query: 278 LAERTAEDEDHMSTEPKTLRQIVPECT--TCNDVETK-----HCKDC-GCSICAGKTSPD 329
L ++ +DH+ + R P C T N E C +C C +C + D
Sbjct: 206 LRKQKGRRQDHLIKCQRCCRSGHPTCLQFTLNMTEAVKTYKWQCIECKSCILCGTSENDD 265
Query: 330 KLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSC 364
+L+ C++C YH++CL PP+ PE W C C
Sbjct: 266 QLLFCDDCDRGYHMYCLNPPVAEPPEGS-WSCHLC 299
>UNIPROTKB|E9PR29 [details] [associations]
symbol:TRIM68 "E3 ubiquitin-protein ligase TRIM68"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC090719 HGNC:HGNC:21161
ChiTaRS:TRIM68 IPI:IPI00983538 ProteinModelPortal:E9PR29 SMR:E9PR29
Ensembl:ENST00000533021 ArrayExpress:E9PR29 Bgee:E9PR29
Uniprot:E9PR29
Length = 198
Score = 122 (48.0 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 681 VLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACN---SCPYCR 733
++E I E+ C IC + +P+++DC H+FCH CL ++I ++ N +CP CR
Sbjct: 6 LVEAIVEEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCR 61
>UNIPROTKB|F5GXK7 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC126309 HGNC:HGNC:12468
ChiTaRS:UBC IPI:IPI01015985 ProteinModelPortal:F5GXK7 SMR:F5GXK7
Ensembl:ENST00000541272 ArrayExpress:F5GXK7 Bgee:F5GXK7
Uniprot:F5GXK7
Length = 169
Score = 117 (46.2 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 77 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPSDQQRLIFAGKQLEDGRTLSDY 135
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 136 NIQKESTLHLVLR 148
Score = 117 (46.2 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>FB|FBgn0027620 [details] [associations]
symbol:Acf1 "ATP-dependent chromatin assembly factor large
subunit" species:7227 "Drosophila melanogaster" [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0016590 "ACF
complex" evidence=IDA;IPI] [GO:0006334 "nucleosome assembly"
evidence=IDA] [GO:0006333 "chromatin assembly or disassembly"
evidence=NAS;TAS] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016589 "NURF complex" evidence=IDA] [GO:0008623
"CHRAC" evidence=IDA;NAS] [GO:0042766 "nucleosome mobilization"
evidence=IDA;TAS] [GO:0003677 "DNA binding" evidence=IDA;TAS]
[GO:0031497 "chromatin assembly" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0043462 "regulation of ATPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0048666 "neuron development" evidence=IMP] [GO:0008544
"epidermis development" evidence=IMP] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0045892 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0048813 GO:GO:0007517 GO:GO:0043462 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0008544 GO:GO:0042766
GO:GO:0016584 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
GO:GO:0016590 GO:GO:0008623 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 HSSP:Q9UIG0 FlyBase:FBgn0027620 EMBL:AJ238397
ProteinModelPortal:Q9NG24 STRING:Q9NG24 PRIDE:Q9NG24
InParanoid:Q9NG24 ArrayExpress:Q9NG24 Bgee:Q9NG24 Uniprot:Q9NG24
Length = 1476
Score = 142 (55.0 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTSEVIAPGQKL 378
C +C + P+K+++C+EC H++CLKP L SVP + W+C C + ++ GQ
Sbjct: 1065 CKVCRRGSDPEKMLLCDECNAGTHMFCLKPKLRSVPPGN-WYCNDCVKSLG--LSNGQNE 1121
Query: 379 KDSKKKAR 386
KD K+ +
Sbjct: 1122 KDKKQATK 1129
Score = 52 (23.4 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 157 DINKEKPYDEDD--LIFKVVHLKYKDDGSSTMKFDDIRPLP 195
D + ++EDD L+ K Y+D G D +PLP
Sbjct: 925 DNESHETHEEDDGALLGKYARKPYRDPGMYLAASADTKPLP 965
Score = 42 (19.8 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 252 KGLETRLENCKIKFVKELYKIESPKLLAERTAEDEDHMSTEPKTLRQ 298
K L LE ++K KE IE K AE+ A+ + + E L Q
Sbjct: 277 KSLAEELE--RVKREKEAKLIELEKQKAEKKAQLIERVENECNLLLQ 321
Score = 40 (19.1 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 13/54 (24%), Positives = 27/54 (50%)
Query: 467 YEDDVDDGDSFLYTGSGGRDLSGN--KRTSVQSFDQTLTRMNKALARNCNAPID 518
+++DV+D +S T S R ++G +R + + LT +K + + +D
Sbjct: 1168 HDEDVEDDESVTSTPSSSR-VNGRILRRPRTRPTSRRLT--SKEIEEHAQEDVD 1218
>UNIPROTKB|C9JVI3 [details] [associations]
symbol:TRIM2 "Tripartite motif-containing protein 2"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 HGNC:HGNC:15974 ChiTaRS:TRIM2
EMBL:AC013477 EMBL:AC114791 IPI:IPI00925733
ProteinModelPortal:C9JVI3 SMR:C9JVI3 STRING:C9JVI3
Ensembl:ENST00000441616 UCSC:uc003ini.1 HOGENOM:HOG000198480
ArrayExpress:C9JVI3 Bgee:C9JVI3 Uniprot:C9JVI3
Length = 138
Score = 107 (42.7 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 23/55 (41%), Positives = 29/55 (52%)
Query: 681 VLEHIQEKFL-CIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRK 734
V+ I ++FL C IC E P L C+HTFC CL+ S SCP CR+
Sbjct: 12 VVRQIDKQFLICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTL-SCPVCRQ 65
>CGD|CAL0001506 [details] [associations]
symbol:UBI3 species:5476 "Candida albicans" [GO:0042254
"ribosome biogenesis" evidence=IGI] [GO:0003735 "structural
constituent of ribosome" evidence=IGI;ISS] [GO:0005576
"extracellular region" evidence=IDA] [GO:0031386 "protein tag"
evidence=IGI;ISS] [GO:0016567 "protein ubiquitination"
evidence=IGI;ISS] [GO:0005730 "nucleolus" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IEA] [GO:0000028
"ribosomal small subunit assembly" evidence=IEA] [GO:0002109
"maturation of SSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, LSU-rRNA,5S)" evidence=IEA] InterPro:IPR000626
InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599 SMART:SM00213
CGD:CAL0001506 Prosite:PS00299 GO:GO:0005576 GO:GO:0006412
GO:GO:0042254 GO:GO:0016567 GO:GO:0005840 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0031386 InterPro:IPR019954
EMBL:AACQ01000086 EMBL:AACQ01000085 InterPro:IPR019956
PRINTS:PR00348 KO:K02977 RefSeq:XP_715397.1 RefSeq:XP_715467.1
ProteinModelPortal:Q5A109 SMR:Q5A109 STRING:Q5A109 GeneID:3642848
GeneID:3642934 KEGG:cal:CaO19.10599 KEGG:cal:CaO19.3087
Uniprot:Q5A109
Length = 193
Score = 119 (46.9 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K++I++ +P D+QRL + GKQLED L DY
Sbjct: 43 MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 101
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 102 NIQKESTLHLVLR 114
Score = 38 (18.4 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 641 KKSKQVYTLPSSV 653
K+ K+VYT P +
Sbjct: 121 KRKKKVYTTPKKI 133
>UNIPROTKB|Q5A109 [details] [associations]
symbol:UBI3 "Ubiquitin-ribosomal protein fusion S27a"
species:237561 "Candida albicans SC5314" [GO:0003735 "structural
constituent of ribosome" evidence=IGI] [GO:0005576 "extracellular
region" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IGI] [GO:0031386 "protein tag" evidence=IGI] [GO:0042254
"ribosome biogenesis" evidence=IGI] InterPro:IPR000626
InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599 SMART:SM00213
CGD:CAL0001506 Prosite:PS00299 GO:GO:0005576 GO:GO:0006412
GO:GO:0042254 GO:GO:0016567 GO:GO:0005840 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0031386 InterPro:IPR019954
EMBL:AACQ01000086 EMBL:AACQ01000085 InterPro:IPR019956
PRINTS:PR00348 KO:K02977 RefSeq:XP_715397.1 RefSeq:XP_715467.1
ProteinModelPortal:Q5A109 SMR:Q5A109 STRING:Q5A109 GeneID:3642848
GeneID:3642934 KEGG:cal:CaO19.10599 KEGG:cal:CaO19.3087
Uniprot:Q5A109
Length = 193
Score = 119 (46.9 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K++I++ +P D+QRL + GKQLED L DY
Sbjct: 43 MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 101
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 102 NIQKESTLHLVLR 114
Score = 38 (18.4 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 641 KKSKQVYTLPSSV 653
K+ K+VYT P +
Sbjct: 121 KRKKKVYTTPKKI 133
>UNIPROTKB|F1PJS3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00530000063118 OMA:CENEKEM EMBL:AAEX03004965
Ensembl:ENSCAFT00000016655 Uniprot:F1PJS3
Length = 1476
Score = 141 (54.7 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 39/135 (28%), Positives = 63/135 (46%)
Query: 234 KQGKRLTTELIATVFIGKKGLETRLENCKIKFVKELYKIESPK----LLAERTAEDEDHM 289
++ KR+ E + ++ E R N + + K E+ K +L + E ++H+
Sbjct: 161 RRAKRMRAEAMNIKIEPEETTEARTHNLRRRMGCPTPKCENEKEMKGILKQEPTEKKEHI 220
Query: 290 STEPKTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHYYHIWCLKPP 349
K + + TT N V+ C CG +G D+L++C+ C YH +CL PP
Sbjct: 221 IESEKEKPKSRSKKTT-NAVDLYVCLLCG----SGNDE-DRLLLCDGCDDSYHTFCLIPP 274
Query: 350 LESVPEDDEWFCPSC 364
L VP+ D W CP C
Sbjct: 275 LHDVPKGD-WRCPKC 288
Score = 46 (21.3 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 21/72 (29%), Positives = 28/72 (38%)
Query: 670 IKALCKEGQKEVLEHIQEKFLCIICQELVYK---PITLDCVHTFCHDCLKRAFKIESDAC 726
I CK G L H++E LC C YK TLD ++ + RA A
Sbjct: 636 ISCSCKPGLLVCLHHVKE--LCS-CPPYKYKLRYRYTLDDLYPMMNALKLRAESYNEWAL 692
Query: 727 NSCPYCRKEMNK 738
N ++NK
Sbjct: 693 NVNEALEAKINK 704
Score = 43 (20.2 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 19/76 (25%), Positives = 32/76 (42%)
Query: 673 LCKEGQKEVLEHIQEKFLCI-ICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNS--- 728
L EG+ +L +Q+ L + +CQ+ P+ + C C D + +
Sbjct: 1093 LANEGK--LLSPVQDVELKVCLCQKAPAAPM-IQC--ELCRDAFHTSCVVVPSISQGPRI 1147
Query: 729 --CPYCRKEMNKSCLE 742
CP+CR+ K LE
Sbjct: 1148 WLCPHCRRS-EKPPLE 1162
Score = 39 (18.8 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 358 EWFCPSCKRDTSEVIAPGQKLKDSKKKARMASTNSKSTR 396
E CP C ++ G K K K K + S KST+
Sbjct: 1020 EVLCPRC-----DIGLWGLKRKQRKFKEPLPSGKKKSTK 1053
>UNIPROTKB|F1P0N4 [details] [associations]
symbol:DPF3 "Zinc finger protein DPF3" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR015880 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016 PROSITE:PS50157
SMART:SM00184 SMART:SM00249 SMART:SM00355 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 IPI:IPI00589005 EMBL:AADN02033575
EMBL:AADN02033576 Ensembl:ENSGALT00000015230 ArrayExpress:F1P0N4
Uniprot:F1P0N4
Length = 379
Score = 128 (50.1 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 314 CKDC-GCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCK 365
C +C CS+C + D+L+ C++C YH++CL PP+ PE W C C+
Sbjct: 314 CIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLNPPVFEPPEGS-WSCHLCR 365
>UNIPROTKB|B0V1M0 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOVERGEN:HBG001357 UniGene:Hs.493275
HGNC:HGNC:16289 eggNOG:NOG310139 OrthoDB:EOG4K0QNJ EMBL:CR925727
IPI:IPI00892854 SMR:B0V1M0 Ensembl:ENST00000422484 Uniprot:B0V1M0
Length = 248
Score = 124 (48.7 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 680 EVLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACN--SCPYCRKEMN 737
+ + +QE+ +C IC +++ KP+T+DC H FC C+ + I +C CP C+ +
Sbjct: 5 QFVNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQ---IGETSCGFFKCPLCKTSVR 61
Query: 738 KSCLETHS 745
K+ + +S
Sbjct: 62 KNAIRFNS 69
>UNIPROTKB|F1S4N3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0034647 OMA:CENEKEM
EMBL:CU986276 Ensembl:ENSSSCT00000011960 Uniprot:F1S4N3
Length = 1304
Score = 130 (50.8 bits), Expect = 8.1e-05, Sum P(3) = 8.1e-05
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSC 364
C +C + D+L++C+ C YH +CL PPL VP+ D W CP C
Sbjct: 311 CLLCGSGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPKC 355
Score = 55 (24.4 bits), Expect = 8.1e-05, Sum P(3) = 8.1e-05
Identities = 18/78 (23%), Positives = 38/78 (48%)
Query: 54 EYMLFDYNVNLN-DVIQLMIKADI-----DKNYQSSESSSKENIQPNGPACKPNINTENA 107
E +L YN+ L+ D ++ + K ++ DK Y+ + ++++QP+ C P +
Sbjct: 175 ERILNPYNLFLSGDSLRCLQKPNLNTDTKDKEYKPHDIPQRQSVQPS-ETCPPARRAKRM 233
Query: 108 SSSGNNT--EPEDFVDLK 123
+ N EPE+ + +
Sbjct: 234 RAEAMNIKIEPEETAEAR 251
Score = 46 (21.3 bits), Expect = 8.1e-05, Sum P(3) = 8.1e-05
Identities = 21/72 (29%), Positives = 28/72 (38%)
Query: 670 IKALCKEGQKEVLEHIQEKFLCIICQELVYK---PITLDCVHTFCHDCLKRAFKIESDAC 726
I CK G L H++E LC C YK TLD ++ + RA A
Sbjct: 703 ISCSCKPGLLVCLHHVKE--LCS-CPPYKYKLRYRYTLDDLYPMMNALKLRAESYNEWAL 759
Query: 727 NSCPYCRKEMNK 738
N ++NK
Sbjct: 760 NVNEALEAKINK 771
Score = 42 (19.8 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 19/73 (26%), Positives = 32/73 (43%)
Query: 673 LCKEGQKEVLEHIQEKFLCI-ICQELVYKP-ITLD-CVHTFCHDCLKRAFKIESDACNSC 729
L EG+ +L +Q+ + + +CQ+ P I + C F C+ + C
Sbjct: 1160 LANEGK--LLSPVQDVDMKVCLCQKAPAAPMIQCELCRDAFHTSCVAVPSISQGPRIWLC 1217
Query: 730 PYCRKEMNKSCLE 742
P+CR+ K LE
Sbjct: 1218 PHCRRS-EKPPLE 1229
>UNIPROTKB|I3LH17 [details] [associations]
symbol:I3LH17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
OMA:WILGVCA Ensembl:ENSSSCT00000029217 Uniprot:I3LH17
Length = 483
Score = 129 (50.5 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 681 VLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCL---KRAFKIESDACNSCPYCR 733
+LE+I+E+ C IC EL+ +P++LDC H+FC DCL + + + ++CP CR
Sbjct: 5 ILENIREEVTCPICLELLKEPLSLDCGHSFCQDCLTVNSKKSMMGLEGKSNCPVCR 60
>UNIPROTKB|F1P0N5 [details] [associations]
symbol:DPF3 "Zinc finger protein DPF3" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR015880 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016 PROSITE:PS50157
SMART:SM00184 SMART:SM00249 SMART:SM00355 GO:GO:0046872
GO:GO:0008270 GO:GO:0071565 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 IPI:IPI00598666 OMA:TNMTEAV
EMBL:AADN02033575 EMBL:AADN02033576 Ensembl:ENSGALT00000015229
ArrayExpress:F1P0N5 Uniprot:F1P0N5
Length = 416
Score = 128 (50.1 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 314 CKDC-GCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCK 365
C +C CS+C + D+L+ C++C YH++CL PP+ PE W C C+
Sbjct: 351 CIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLNPPVFEPPEGS-WSCHLCR 402
>UNIPROTKB|F1RHP9 [details] [associations]
symbol:TRIM68 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060765 "regulation of androgen receptor signaling
pathway" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=IEA]
[GO:0035035 "histone acetyltransferase binding" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0005794
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0060765 InterPro:IPR017907 GO:GO:0051865 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104307 KO:K12033 EMBL:CU633634
RefSeq:XP_003482598.1 Ensembl:ENSSSCT00000016119 GeneID:100738170
KEGG:ssc:100738170 OMA:GVCKEDV Uniprot:F1RHP9
Length = 485
Score = 129 (50.5 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 681 VLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACN---SCPYCR 733
++E + E+ C IC + +P+++DC H+FCH CL +++ +A N SCP CR
Sbjct: 6 LMEAVVEEVACPICMTFLKEPVSIDCGHSFCHSCLSGLWEVPGEAPNWGYSCPLCR 61
>UNIPROTKB|E2RKD8 [details] [associations]
symbol:RNF8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070936 "protein K48-linked ubiquitination"
evidence=IEA] [GO:0070535 "histone H2A K63-linked ubiquitination"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0045900 "negative regulation of translational
elongation" evidence=IEA] [GO:0045739 "positive regulation of DNA
repair" evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0043486 "histone exchange" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0033523 "histone H2B ubiquitination"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0010212 "response to ionizing radiation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007286 "spermatid development" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000253
InterPro:IPR008984 InterPro:IPR017335 Pfam:PF00498 Pfam:PF13639
PIRSF:PIRSF037950 PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184
SMART:SM00240 Prosite:PS00518 GO:GO:0005634 GO:GO:0051301
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 Gene3D:2.60.200.20
SUPFAM:SSF49879 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006302 GO:GO:0016881 GO:GO:0045739 GO:GO:0000151
InterPro:IPR017907 GO:GO:0033523 GeneTree:ENSGT00400000022349
PANTHER:PTHR15067:SF3 EMBL:AAEX03008298 Ensembl:ENSCAFT00000002283
Uniprot:E2RKD8
Length = 487
Score = 124 (48.7 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 32/92 (34%), Positives = 50/92 (54%)
Query: 676 EGQKE-VLEHIQE----KFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCP 730
+ QKE VL H+ + + CIIC E + +TL+C H+FC C+ K + + CP
Sbjct: 385 QAQKEEVLSHVNDVLENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKVE----CP 440
Query: 731 YCRKEMNKSCLETHSNDALQSILSTLFPGYSS 762
CRK++ KS +THS L + ++ + SS
Sbjct: 441 ICRKDI-KS--KTHSL-VLDNCINKMVDNLSS 468
Score = 51 (23.0 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 25/113 (22%), Positives = 51/113 (45%)
Query: 11 SKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYM--LFDYNVNLNDVI 68
SK C L++S+ + +K +E + +D + L G L E + L Y+++ D I
Sbjct: 52 SKICPLMISRNHCV--LKQNVEGQWTI-MDNKSL--NGVWLNRERLEPLKVYSIHKGDHI 106
Query: 69 QLMIKADIDKNYQSSESSSKENIQPNGPACKPNINTENASSSGNNTEPEDFVD 121
QL + + +N + ++E+ + P P + + G T+ + +D
Sbjct: 107 QLGVPLENKENAEYEYEVTEEDWERMYPCLAPKNDQIIGKNRGLRTKRKFSLD 159
>UNIPROTKB|J9P6M8 [details] [associations]
symbol:RNF8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0016881 "acid-amino acid ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
InterPro:IPR017335 Pfam:PF00498 Pfam:PF13639 PIRSF:PIRSF037950
PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184 SMART:SM00240
Prosite:PS00518 GO:GO:0005634 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006974 GO:GO:0016567 Gene3D:2.60.200.20
SUPFAM:SSF49879 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016881
InterPro:IPR017907 KO:K10667 CTD:9025 GeneTree:ENSGT00400000022349
OMA:EVTEEDW PANTHER:PTHR15067:SF3 EMBL:AAEX03008298
RefSeq:XP_864730.1 ProteinModelPortal:J9P6M8
Ensembl:ENSCAFT00000047572 GeneID:481775 KEGG:cfa:481775
Uniprot:J9P6M8
Length = 487
Score = 124 (48.7 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 32/92 (34%), Positives = 50/92 (54%)
Query: 676 EGQKE-VLEHIQE----KFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCP 730
+ QKE VL H+ + + CIIC E + +TL+C H+FC C+ K + + CP
Sbjct: 385 QAQKEEVLSHVNDVLENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKVE----CP 440
Query: 731 YCRKEMNKSCLETHSNDALQSILSTLFPGYSS 762
CRK++ KS +THS L + ++ + SS
Sbjct: 441 ICRKDI-KS--KTHSL-VLDNCINKMVDNLSS 468
Score = 51 (23.0 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 25/113 (22%), Positives = 51/113 (45%)
Query: 11 SKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYM--LFDYNVNLNDVI 68
SK C L++S+ + +K +E + +D + L G L E + L Y+++ D I
Sbjct: 52 SKICPLMISRNHCV--LKQNVEGQWTI-MDNKSL--NGVWLNRERLEPLKVYSIHKGDHI 106
Query: 69 QLMIKADIDKNYQSSESSSKENIQPNGPACKPNINTENASSSGNNTEPEDFVD 121
QL + + +N + ++E+ + P P + + G T+ + +D
Sbjct: 107 QLGVPLENKENAEYEYEVTEEDWERMYPCLAPKNDQIIGKNRGLRTKRKFSLD 159
>UNIPROTKB|F1RLV7 [details] [associations]
symbol:LOC100738990 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00690000101646 EMBL:CU856599
Ensembl:ENSSSCT00000016021 OMA:HGEGGIS Uniprot:F1RLV7
Length = 492
Score = 129 (50.5 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 681 VLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCL---KRAFKIESDACNSCPYCR 733
+LE+I+E+ C IC EL+ +P++LDC H+FC DCL + + + ++CP CR
Sbjct: 5 ILENIREEVTCPICLELLKEPLSLDCGHSFCQDCLTVNSKKSMMGLEGKSNCPVCR 60
>UNIPROTKB|P58270 [details] [associations]
symbol:DPF3 "Zinc finger protein DPF3" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR015880 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016 PROSITE:PS50157
SMART:SM00184 SMART:SM00249 SMART:SM00355 GO:GO:0005634
GO:GO:0007399 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359
HOVERGEN:HBG004475 InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
HOGENOM:HOG000217918 OrthoDB:EOG4T4CX1 EMBL:AF362754 EMBL:AF362753
EMBL:AF362756 EMBL:AF362755 IPI:IPI00575057 IPI:IPI00589005
IPI:IPI00598666 IPI:IPI00600182 RefSeq:NP_989970.1 UniGene:Gga.46
ProteinModelPortal:P58270 GeneID:395351 KEGG:gga:395351 CTD:8110
InParanoid:P58270 NextBio:20815436 Uniprot:P58270
Length = 427
Score = 128 (50.1 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 314 CKDC-GCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCK 365
C +C CS+C + D+L+ C++C YH++CL PP+ PE W C C+
Sbjct: 362 CIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLNPPVFEPPEGS-WSCHLCR 413
>UNIPROTKB|P58267 [details] [associations]
symbol:DPF1 "Zinc finger protein neuro-d4" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=ISS] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0005634 GO:GO:0005737 GO:GO:0007399 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0003676
Gene3D:3.30.160.60 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 EMBL:AF362752
IPI:IPI00597142 RefSeq:NP_989971.1 UniGene:Gga.47
ProteinModelPortal:P58267 GeneID:395352 KEGG:gga:395352 CTD:8193
HOVERGEN:HBG004475 NextBio:20815437 InterPro:IPR025750 Pfam:PF14051
Uniprot:P58267
Length = 380
Score = 127 (49.8 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 314 CKDC-GCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTSEVI 372
C +C CS+C + ++L+ C++C YH++C+ PP+ PE W C C R +
Sbjct: 315 CIECKNCSLCGSAENDEQLLFCDDCDRGYHMYCISPPVAEPPEGT-WSCHLCLRQLKDKA 373
Query: 373 A 373
A
Sbjct: 374 A 374
>UNIPROTKB|B3KV94 [details] [associations]
symbol:JARID1B "cDNA FLJ16281 fis, clone NT2RI3003104,
highly similar to Homo sapiens Jumonji, AT rich interactive domain
1B (RBP2-like) (JARID1B), mRNA" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:CH471067 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0032453
HOGENOM:HOG000290719 EMBL:AC098934 EMBL:AC104463 UniGene:Hs.443650
HGNC:HGNC:18039 ChiTaRS:KDM5B HOVERGEN:HBG068574 EMBL:AK122752
IPI:IPI00877939 SMR:B3KV94 STRING:B3KV94 Ensembl:ENST00000235790
Uniprot:B3KV94
Length = 1275
Score = 129 (50.5 bits), Expect = 9.6e-05, Sum P(3) = 9.6e-05
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSC 364
C +C D+L++C+ C YH +CL PPL VP+ D W CP C
Sbjct: 154 CLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPKC 198
Score = 55 (24.4 bits), Expect = 9.6e-05, Sum P(3) = 9.6e-05
Identities = 18/78 (23%), Positives = 38/78 (48%)
Query: 54 EYMLFDYNVNLN-DVIQLMIKADI-----DKNYQSSESSSKENIQPNGPACKPNINTENA 107
E +L YN+ L+ D ++ + K ++ DK Y+ + ++++QP+ C P +
Sbjct: 18 ERILNPYNLFLSGDSLRCLQKPNLTTDTKDKEYKPHDIPQRQSVQPS-ETCPPARRAKRM 76
Query: 108 SSSGNNT--EPEDFVDLK 123
+ N EPE+ + +
Sbjct: 77 RAEAMNIKIEPEETTEAR 94
Score = 46 (21.3 bits), Expect = 9.6e-05, Sum P(3) = 9.6e-05
Identities = 21/72 (29%), Positives = 28/72 (38%)
Query: 670 IKALCKEGQKEVLEHIQEKFLCIICQELVYK---PITLDCVHTFCHDCLKRAFKIESDAC 726
I CK G L H++E LC C YK TLD ++ + RA A
Sbjct: 546 ISCSCKPGLLVCLHHVKE--LCS-CPPYKYKLRYRYTLDDLYPMMNALKLRAESYNEWAL 602
Query: 727 NSCPYCRKEMNK 738
N ++NK
Sbjct: 603 NVNEALEAKINK 614
Score = 39 (18.8 bits), Expect = 0.00082, Sum P(4) = 0.00082
Identities = 11/40 (27%), Positives = 16/40 (40%)
Query: 358 EWFCPSCKRDTSEVIAPGQKLKDSKKKARMASTNSKSTRD 397
E CP C + +KLK+ + ST +S D
Sbjct: 930 EVLCPRCDIGLLGLKRKQRKLKEPLPNGKKKSTKLESLSD 969
Score = 39 (18.8 bits), Expect = 0.00082, Sum P(4) = 0.00082
Identities = 20/73 (27%), Positives = 31/73 (42%)
Query: 673 LCKEGQK-EVLEHIQEKFLCIICQELVYKP-ITLD-CVHTFCHDCLKRAFKIESDACNSC 729
L EG+ L+ + K +C+ CQ+ P I + C F C+ + C
Sbjct: 1003 LANEGKLLSPLQDVDIK-ICL-CQKAPAAPMIQCELCRDAFHTSCVAVPSISQGLRIWLC 1060
Query: 730 PYCRKEMNKSCLE 742
P+CR+ K LE
Sbjct: 1061 PHCRRS-EKPPLE 1072
>UNIPROTKB|Q6NRG0 [details] [associations]
symbol:rnf8-b "E3 ubiquitin-protein ligase RNF8-B"
species:8355 "Xenopus laevis" [GO:0000151 "ubiquitin ligase
complex" evidence=ISS] [GO:0000781 "chromosome, telomeric region"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006302 "double-strand
break repair" evidence=ISS] [GO:0006303 "double-strand break repair
via nonhomologous end joining" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0007286 "spermatid development" evidence=ISS] [GO:0008270 "zinc
ion binding" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0033522 "histone H2A ubiquitination"
evidence=ISS] [GO:0033523 "histone H2B ubiquitination"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISS]
[GO:0043486 "histone exchange" evidence=ISS] [GO:0045190 "isotype
switching" evidence=ISS] [GO:0045739 "positive regulation of DNA
repair" evidence=ISS] [GO:0045900 "negative regulation of
translational elongation" evidence=ISS] [GO:0070534 "protein
K63-linked ubiquitination" evidence=ISS] [GO:0070535 "histone H2A
K63-linked ubiquitination" evidence=ISS] [GO:0070936 "protein
K48-linked ubiquitination" evidence=ISS] InterPro:IPR001841
InterPro:IPR000253 InterPro:IPR008984 InterPro:IPR017335
Pfam:PF00498 PIRSF:PIRSF037950 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0042803 GO:GO:0051301 GO:GO:0007286
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 Gene3D:2.60.200.20
SUPFAM:SSF49879 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0043486 GO:GO:0045190 GO:GO:0004842
GO:GO:0042393 GO:GO:0045739 GO:GO:0000151 InterPro:IPR017907
GO:GO:0070936 GO:GO:0000781 GO:GO:0006303 GO:GO:0033523
GO:GO:0045900 GO:GO:0035861 GO:GO:0070535 HSSP:O76064
HOVERGEN:HBG023954 KO:K10667 EMBL:BC070792 RefSeq:NP_001084862.1
UniGene:Xl.4442 ProteinModelPortal:Q6NRG0 SMR:Q6NRG0 GeneID:431911
KEGG:xla:431911 CTD:431911 Xenbase:XB-GENE-5914276 Uniprot:Q6NRG0
Length = 532
Score = 129 (50.5 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 45/204 (22%), Positives = 95/204 (46%)
Query: 570 GSSDFIVWRFHLQRDDEAPAPWTEEGKKRIKDLGLQMIYPEGYXXXXXXXXXXXXNLKRK 629
GS+ ++V + LQ + E+ + +K+L + I+ E +LK +
Sbjct: 256 GSNSYLVVQKELQALRNQLSNEQEQHLQSVKEL--KEIFQEEQQSMGSQKQAEEEHLKEQ 313
Query: 630 VSSETLGE-----SKVKKSKQVYTLPSSVLEHINNDTVHSNVWDEIKALCKEGQKEVLEH 684
++ + L E ++ ++K + +++ N + + +E + +C + ++EVL H
Sbjct: 314 LA-QALQEHTQLMQELNRNKNDF---EQIIQAKNKELQETK--EEKEKVCAQ-KEEVLNH 366
Query: 685 IQE----KFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKSC 740
+ + + CIIC E + +TL+C H+FC C+K K + + CP CR+E+
Sbjct: 367 MNDVLDNELQCIICSEHFIEAVTLNCAHSFCSYCIKSWRKRKEE----CPICRQEILSET 422
Query: 741 LETHSNDALQSILSTLFPGYSSAR 764
++ + S++ L P + R
Sbjct: 423 RSLVLDNCIDSMVDKLSPEMKNRR 446
>UNIPROTKB|H0YEK2 [details] [associations]
symbol:PHF21A "PHD finger protein 21A" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC068385
HGNC:HGNC:24156 EMBL:AC024475 EMBL:AC129913 Ensembl:ENST00000530587
Bgee:H0YEK2 Uniprot:H0YEK2
Length = 116
Score = 105 (42.0 bits), Expect = 0.00010, P = 0.00010
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 331 LIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCK 365
L++C+ C YH+ CL PPL+++P+ W CP C+
Sbjct: 1 LLMCDTCSRVYHLDCLDPPLKTIPKG-MWICPRCQ 34
>ZFIN|ZDB-GENE-010328-16 [details] [associations]
symbol:baz1b "bromodomain adjacent to zinc finger
domain, 1B" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004715 "non-membrane spanning protein
tyrosine kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA;ISS] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA;ISS] [GO:0016572 "histone
phosphorylation" evidence=ISS] [GO:0035173 "histone kinase
activity" evidence=ISS] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 SMART:SM00297 ZFIN:ZDB-GENE-010328-16 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR018501 InterPro:IPR013136 Pfam:PF10537 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 EMBL:BX950182
EMBL:CU326349 IPI:IPI00998609 Ensembl:ENSDART00000128582
Uniprot:E7EYG7
Length = 1802
Score = 146 (56.5 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTSEVIAPGQKL 378
C +C K DKLI+C+EC +H++CL+P L +P EW CP+C+ + + G+
Sbjct: 1205 CKVCRRKGEDDKLILCDECNKAFHLFCLRPALYRIPAG-EWLCPACQPTIARRSSRGRNY 1263
Query: 379 KDSKKK 384
K+ ++
Sbjct: 1264 KEDSEE 1269
Score = 50 (22.7 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 251 KKGLETRLEN---CKIKFVKE-LYKIESPKLLAERTAEDEDHMST 291
K+ +ET+ + K + KE K E+PK+L + E ED +ST
Sbjct: 797 KEQMETKTDGDVLIKAEKKKESTVKKETPKVLPKEEPEPEDMIST 841
Score = 42 (19.8 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 13 NCVLVLSKRTLISDMKTQIENTLDVPVDK 41
N VLV+ +TL+ D + + LD+P+ +
Sbjct: 651 NRVLVVLLQTLLQDELAEGYSELDMPLSE 679
Score = 42 (19.8 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 84 ESSSKENIQPNGP-AC-KPNINTENASSSGNNTEPE 117
E+ +EN + AC P+ + ENAS EP+
Sbjct: 145 ENPPEENAEKKMEGACDSPSSDKENASQENLKKEPQ 180
Score = 39 (18.8 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 19/90 (21%), Positives = 34/90 (37%)
Query: 468 EDDVDDGDSFLYTGSGGRDLSGNKRTSVQSFDQTLTRMNKALARNCNAPIDDKRGNEAVD 527
EDD ++ + +G R + R + + T+ NK + + DD E
Sbjct: 1645 EDDEEEEERSKKQKNGKRSKKASSRRKEDNSRRKNTKRNKD---DSESEEDDDEEEEDEK 1701
Query: 528 WKKGKPVRVMRNFHGAKHSKYAPKEGNRYD 557
KK K + N +S+ + N+ D
Sbjct: 1702 MKKQKNRKQTTNRRKQDNSRQKKTKQNKDD 1731
>POMBASE|SPAC6B12.07c [details] [associations]
symbol:SPAC6B12.07c "ubiquitin-protein ligase E3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISM] [GO:0005829
"cytosol" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=ISM]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
PomBase:SPAC6B12.07c Prosite:PS00518 GO:GO:0005829 EMBL:CU329670
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 InterPro:IPR004331 Pfam:PF03105
PROSITE:PS51382 eggNOG:COG5574 PIR:T39014 RefSeq:NP_593762.2
EnsemblFungi:SPAC6B12.07c.1 GeneID:2543315 OrthoDB:EOG4SFDFM
NextBio:20804332 Uniprot:O14212
Length = 470
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 31/92 (33%), Positives = 47/92 (51%)
Query: 671 KALCKEGQKEVLEHIQE--KFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNS 728
KA+C ++ I + F C IC + YKP+ L C H FC CL ++ +
Sbjct: 352 KAICFSLSSKLFSIIPQLRDFECAICSNVAYKPVRLGCSHVFCLHCL---IILQKQKVDF 408
Query: 729 CPYCR-KEMNKSCLETHSND-ALQSILSTLFP 758
CP CR KE+ K+ ++ + D AL + + T FP
Sbjct: 409 CPLCRAKEVMKA--DSRNIDHALMNFMKTYFP 438
>TAIR|locus:2032592 [details] [associations]
symbol:SUVH3 "SU(VAR)3-9 homolog 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0040029 "regulation of gene
expression, epigenetic" evidence=TAS] [GO:0042054 "histone
methyltransferase activity" evidence=ISS] [GO:0005694 "chromosome"
evidence=IDA] Pfam:PF00856 InterPro:IPR001214 InterPro:IPR003105
InterPro:IPR003606 InterPro:IPR007728 InterPro:IPR025794
Pfam:PF02182 Pfam:PF05033 PROSITE:PS50280 PROSITE:PS50867
PROSITE:PS51015 SMART:SM00317 SMART:SM00466 SMART:SM00468
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005694
GO:GO:0000775 GO:GO:0003677 GO:GO:0008270 GO:GO:0042054
GO:GO:0018024 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
EMBL:AC008017 GO:GO:0040029 KO:K11420 eggNOG:COG3440
Gene3D:2.30.280.10 HOGENOM:HOG000238382 EMBL:AF344446 EMBL:AY099620
EMBL:BT002137 IPI:IPI00533947 PIR:F96756 RefSeq:NP_565056.1
UniGene:At.11687 UniGene:At.43232 ProteinModelPortal:Q9C5P4
SMR:Q9C5P4 IntAct:Q9C5P4 PaxDb:Q9C5P4 PRIDE:Q9C5P4
EnsemblPlants:AT1G73100.1 GeneID:843641 KEGG:ath:AT1G73100
TAIR:At1g73100 InParanoid:Q9C5P4 OMA:IHIAFFA PhylomeDB:Q9C5P4
ProtClustDB:CLSN2917436 Genevestigator:Q9C5P4 GermOnline:AT1G73100
Uniprot:Q9C5P4
Length = 669
Score = 130 (50.8 bits), Expect = 0.00010, P = 0.00010
Identities = 41/122 (33%), Positives = 59/122 (48%)
Query: 420 GPIPGIEVGQSYLYRFQASEAGVHRPHVSGIH------GREDVG-AFSLVLSGGYEDDVD 472
G +PGIEVG + R + G+H ++GI G ++ A S+V SG YE +
Sbjct: 208 GTVPGIEVGDIFFSRIEMCLVGLHMQTMAGIDYIISKAGSDEESLATSIVSSGRYEGEAQ 267
Query: 473 DGDSFLYTGSGGRDLSGNKRTSVQSFDQTLTRMNKALARNCNAP--IDDKRGNEAVDWKK 530
D +S +Y+G GG + N++ S DQ L R N AL + + RG E K
Sbjct: 268 DPESLIYSGQGG-NADKNRQAS----DQKLERGNLALENSLRKGNGVRVVRGEEDAASKT 322
Query: 531 GK 532
GK
Sbjct: 323 GK 324
>ZFIN|ZDB-GENE-060825-176 [details] [associations]
symbol:zgc:153389 "zgc:153389" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 ZFIN:ZDB-GENE-060825-176 InterPro:IPR019955
PROSITE:PS50053 eggNOG:COG5272 EMBL:BC122262 IPI:IPI00491305
RefSeq:NP_001038845.1 UniGene:Dr.26102 ProteinModelPortal:Q0P460
SMR:Q0P460 GeneID:751663 KEGG:dre:751663 HOGENOM:HOG000197776
HOVERGEN:HBG096325 InParanoid:Q0P460 NextBio:20917812
Uniprot:Q0P460
Length = 156
Score = 111 (44.1 bits), Expect = 0.00011, P = 0.00011
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 3 VKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDYNV 62
V +++LD V + T + K I ++++ VDKQRL Y+GK L+DE L +YNV
Sbjct: 9 VTVKTLDSQSRTFTVRGEWT-VKQFKEHIAASVEISVDKQRLIYQGKVLQDERTLTEYNV 67
Query: 63 NLNDVIQLM 71
+ VI L+
Sbjct: 68 D-GKVIHLV 75
>ASPGD|ASPL0000000141 [details] [associations]
symbol:AN5961 species:162425 "Emericella nidulans"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003111 Pfam:PF02190 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 EMBL:BN001301 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AACD01000101 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 eggNOG:COG2802 OrthoDB:EOG437VPJ
RefSeq:XP_663565.1 ProteinModelPortal:Q5B0G9
EnsemblFungi:CADANIAT00007064 GeneID:2870893 KEGG:ani:AN5961.2
HOGENOM:HOG000163327 OMA:DCQVCYS Uniprot:Q5B0G9
Length = 623
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 26/82 (31%), Positives = 41/82 (50%)
Query: 685 IQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMN--KSCLE 742
++ + C +C L+ P+T C HTFC C+ A N CP CR+++N S
Sbjct: 198 VRNELDCQVCYSLILDPLTTPCGHTFCRRCVAMALSHS----NLCPICRRKLNMPSSVRS 253
Query: 743 THSNDALQSILSTLFPGYSSAR 764
+N +L I+ TL P ++R
Sbjct: 254 ERNNKSLSDIIETLLPDEVASR 275
>UNIPROTKB|I3LB91 [details] [associations]
symbol:RFPL4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099707
OMA:WIISMKA EMBL:CU019570 Ensembl:ENSSSCT00000027290 Uniprot:I3LB91
Length = 300
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 679 KEVLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCR 733
+ + ++Q++ C +C E+ + PITL C HTFC C++ K + D CP CR
Sbjct: 29 RTMANNLQDEAACTVCLEVFFSPITLSCTHTFCLYCMQSWMKEQEDLKLVCPMCR 83
>RGD|2321712 [details] [associations]
symbol:LOC100360645 "ubiquitin B-like" species:10116 "Rattus
norvegicus" [GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0008585 "female gonad
development" evidence=IEA] [GO:0010992 "ubiquitin homeostasis"
evidence=IEA] [GO:0021888 "hypothalamus gonadotrophin-releasing
hormone neuron development" evidence=IEA] [GO:0060613 "fat pad
development" evidence=IEA] [GO:0072520 "seminiferous tubule
development" evidence=IEA] [GO:0097009 "energy homeostasis"
evidence=IEA] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
RGD:2321712 Prosite:PS00299 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348
IPI:IPI00968459 Ensembl:ENSRNOT00000057671 ArrayExpress:F1M5P0
Uniprot:F1M5P0
Length = 60
Score = 104 (41.7 bits), Expect = 0.00013, P = 0.00013
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 24 ISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDYNVNLNDVIQLMIK 73
I ++K +I++ +P D+QRL + GKQLED L DYN+ + L+++
Sbjct: 6 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 55
>UNIPROTKB|F1M4U4 [details] [associations]
symbol:F1M4U4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0007141 "male meiosis I" evidence=IEA]
[GO:0007144 "female meiosis I" evidence=IEA] [GO:0008585 "female
gonad development" evidence=IEA] [GO:0010992 "ubiquitin
homeostasis" evidence=IEA] [GO:0021888 "hypothalamus
gonadotrophin-releasing hormone neuron development" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA]
[GO:0060613 "fat pad development" evidence=IEA] [GO:0072520
"seminiferous tubule development" evidence=IEA] [GO:0097009 "energy
homeostasis" evidence=IEA] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 Prosite:PS00299 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019954 GO:GO:0022625 InterPro:IPR019956 PRINTS:PR00348
IPI:IPI00950621 Ensembl:ENSRNOT00000065032 ArrayExpress:F1M4U4
Uniprot:F1M4U4
Length = 59
Score = 104 (41.7 bits), Expect = 0.00013, P = 0.00013
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 24 ISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDYNVNLNDVIQLMIK 73
I ++K +I++ +P D+QRL + GKQLED L DYN+ + L+++
Sbjct: 6 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 55
>MGI|MGI:2685640 [details] [associations]
symbol:Trim75 "tripartite motif-containing 75" species:10090
"Mus musculus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 MGI:MGI:2685640 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HSSP:Q9CQJ4 HOGENOM:HOG000234133 HOVERGEN:HBG001357
GeneTree:ENSGT00700000104307 OrthoDB:EOG4NP73C eggNOG:NOG254111
EMBL:AK136018 IPI:IPI00339960 RefSeq:NP_001028601.1
UniGene:Mm.334557 ProteinModelPortal:Q3UWZ0 SMR:Q3UWZ0 PRIDE:Q3UWZ0
Ensembl:ENSMUST00000095295 GeneID:333307 KEGG:mmu:333307 CTD:391714
InParanoid:Q3UWZ0 KO:K12037 OMA:NILVETI NextBio:399957 Bgee:Q3UWZ0
Genevestigator:Q3UWZ0 Uniprot:Q3UWZ0
Length = 467
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 30/87 (34%), Positives = 45/87 (51%)
Query: 680 EVLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKS 739
EVL +Q++ C IC + + P+T++C H FC C+K F A +SCP CR +
Sbjct: 5 EVLARLQKETKCPICLDDLTDPVTVECGHNFCRSCIKD-FWAGQQATSSCPVCRHQCQHR 63
Query: 740 CLETHSNDALQSILST--LFPGYSSAR 764
L SN L +++ T L G + R
Sbjct: 64 NLR--SNAQLGNMIETAQLLQGMENKR 88
>ZFIN|ZDB-GENE-030131-5132 [details] [associations]
symbol:dpf2l "D4, zinc and double PHD fingers
family 2, like" species:7955 "Danio rerio" [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR007087
InterPro:IPR015880 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028
PROSITE:PS50016 PROSITE:PS50157 SMART:SM00184 SMART:SM00249
SMART:SM00355 ZFIN:ZDB-GENE-030131-5132 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 HOVERGEN:HBG004475
InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
HOGENOM:HOG000217918 GeneTree:ENSGT00530000063194 EMBL:BX005228
EMBL:BC092130 IPI:IPI00490729 RefSeq:NP_997861.2 UniGene:Dr.75185
STRING:Q58E00 Ensembl:ENSDART00000054243 GeneID:326933
KEGG:dre:326933 CTD:326933 InParanoid:Q58E00 OMA:ERSILMP
OrthoDB:EOG40CHH8 NextBio:20809799 Uniprot:Q58E00
Length = 405
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 314 CKDCGC-SICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSC 364
C +C C ++C + D+L+ C++C YH++CL PP+ PE W C C
Sbjct: 336 CIECKCCNVCGTSENDDQLLFCDDCDRGYHMYCLSPPMSDPPEGS-WSCHLC 386
>UNIPROTKB|F1RNQ5 [details] [associations]
symbol:TRIM4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00690000101646 EMBL:FP102554
Ensembl:ENSSSCT00000008377 Uniprot:F1RNQ5
Length = 474
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 683 EHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNS--CPYCRKEMNKSC 740
E +QE+ C IC + P++++C H FC DCL+R + CN CP CR+ S
Sbjct: 4 EDLQEELSCSICLDYFEDPVSIECGHNFCRDCLRRGL---AQGCNQFPCPECRRPSTPSA 60
Query: 741 L 741
L
Sbjct: 61 L 61
>UNIPROTKB|F1SHI5 [details] [associations]
symbol:BAZ1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008623 "CHRAC" evidence=IEA] [GO:0006261
"DNA-dependent DNA replication" evidence=IEA] [GO:0000228 "nuclear
chromosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00297 GO:GO:0046872 GO:GO:0008270
GO:GO:0006261 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000228 CTD:11177 KO:K11655 OMA:SSFQNNV
GO:GO:0008623 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 InterPro:IPR013136 Pfam:PF02791 Pfam:PF10537
SMART:SM00571 PROSITE:PS50827 PROSITE:PS51136
GeneTree:ENSGT00660000095335 EMBL:CT842119 EMBL:CU469145
RefSeq:NP_001231088.1 UniGene:Ssc.6274 Ensembl:ENSSSCT00000002190
GeneID:100151954 KEGG:ssc:100151954 ArrayExpress:F1SHI5
Uniprot:F1SHI5
Length = 1557
Score = 136 (52.9 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 311 TKHCKDCGCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCK 365
+K + C IC K + +++C+ C +H +C++P L++VPE D WFCP C+
Sbjct: 1143 SKSILNARCKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKTVPEGD-WFCPECR 1196
Score = 55 (24.4 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 22/80 (27%), Positives = 37/80 (46%)
Query: 26 DMKTQIENTLDVPVDKQRLFYKG---KQLEDEYMLFDYNVNLNDVIQLMIKAD----IDK 78
+ K Q ++T+ D Q L +G K+ ++E+ F +N V + + AD + +
Sbjct: 721 EQKEQDQDTVTEDEDDQGLHKRGRRGKRGQNEFKEFSRQEEVNCVTREPLTADEEEALKQ 780
Query: 79 NYQSSESSSKENIQPNGPAC 98
+Q E E IQ N AC
Sbjct: 781 EHQRKEKELLEKIQ-NAIAC 799
Score = 40 (19.1 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 266 VKELYKIESPKLLAE--RTAEDEDHMSTEPKT 295
+KE E ++ A+ R +E++ H S +P+T
Sbjct: 918 LKETLLQEKSRICAQLARFSEEKFHFSDKPQT 949
>UNIPROTKB|A1YVX4 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
KO:K11446 CTD:8242 EMBL:EF139241 RefSeq:NP_001090902.1
UniGene:Ssc.25162 ProteinModelPortal:A1YVX4 SMR:A1YVX4
GeneID:100037295 KEGG:ssc:100037295 Uniprot:A1YVX4
Length = 1516
Score = 133 (51.9 bits), Expect = 0.00014, P = 0.00014
Identities = 33/96 (34%), Positives = 48/96 (50%)
Query: 271 KIES--PKLLAERTAEDEDHMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSP 328
K+ES PK E + E+ H S EP T ++ N + + C +C+
Sbjct: 241 KVESTSPKTFLE-SKEELSH-SPEPCT--KMTMRLRR-NHSNAQFIESYVCRMCSRGDED 295
Query: 329 DKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSC 364
DKL++C+ C YHI+CL PPL +P+ W CP C
Sbjct: 296 DKLLLCDGCDDNYHIFCLLPPLPEIPKG-VWRCPKC 330
>UNIPROTKB|F1RUI7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0032453 OMA:ISWQGRA
EMBL:FP102491 Ensembl:ENSSSCT00000013473 ArrayExpress:F1RUI7
Uniprot:F1RUI7
Length = 1516
Score = 133 (51.9 bits), Expect = 0.00014, P = 0.00014
Identities = 33/96 (34%), Positives = 48/96 (50%)
Query: 271 KIES--PKLLAERTAEDEDHMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSP 328
K+ES PK E + E+ H S EP T ++ N + + C +C+
Sbjct: 241 KVESTSPKTFLE-SKEELSH-SPEPCT--KMTMRLRR-NHSNAQFIESYVCRMCSRGDED 295
Query: 329 DKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSC 364
DKL++C+ C YHI+CL PPL +P+ W CP C
Sbjct: 296 DKLLLCDGCDDNYHIFCLLPPLPEIPKG-VWRCPKC 330
>UNIPROTKB|E2R0S2 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ISWQGRA EMBL:AAEX03026384
Ensembl:ENSCAFT00000025665 Uniprot:E2R0S2
Length = 1520
Score = 133 (51.9 bits), Expect = 0.00014, P = 0.00014
Identities = 33/96 (34%), Positives = 48/96 (50%)
Query: 271 KIES--PKLLAERTAEDEDHMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSP 328
K+ES PK E + E+ H S EP T ++ N + + C +C+
Sbjct: 282 KVESTSPKTFLE-SKEELSH-SPEPCT--KMTMRLRR-NHSNAQFIESYVCRMCSRGDED 336
Query: 329 DKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSC 364
DKL++C+ C YHI+CL PPL +P+ W CP C
Sbjct: 337 DKLLLCDGCDDNYHIFCLLPPLPEIPKG-VWRCPKC 371
>UNIPROTKB|F1MYV2 [details] [associations]
symbol:KDM5C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0032453 KO:K11446 CTD:8242
OMA:ISWQGRA EMBL:DAAA02073278 IPI:IPI00703369 RefSeq:NP_776610.2
UniGene:Bt.8145 PRIDE:F1MYV2 Ensembl:ENSBTAT00000019893
GeneID:281490 KEGG:bta:281490 NextBio:20805465 ArrayExpress:F1MYV2
Uniprot:F1MYV2
Length = 1555
Score = 133 (51.9 bits), Expect = 0.00014, P = 0.00014
Identities = 33/96 (34%), Positives = 48/96 (50%)
Query: 271 KIES--PKLLAERTAEDEDHMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSP 328
K+ES PK E + E+ H S EP T ++ N + + C +C+
Sbjct: 282 KVESTSPKTFLE-SKEELSH-SPEPCT--KMTMRLRR-NHSNAQFIESYVCRMCSRGDED 336
Query: 329 DKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSC 364
DKL++C+ C YHI+CL PPL +P+ W CP C
Sbjct: 337 DKLLLCDGCDDNYHIFCLLPPLPEIPKG-VWRCPKC 371
>MGI|MGI:1309478 [details] [associations]
symbol:Baz1a "bromodomain adjacent to zinc finger domain 1A"
species:10090 "Mus musculus" [GO:0000228 "nuclear chromosome"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008623 "CHRAC" evidence=ISO] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00297 MGI:MGI:1309478 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0006261
GO:GO:0006338 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 InterPro:IPR018359 GO:GO:0000228
HOGENOM:HOG000095179 HOVERGEN:HBG080889 OMA:SSFQNNV
OrthoDB:EOG49GKFR GO:GO:0008623 InterPro:IPR004022
InterPro:IPR018501 InterPro:IPR013136 Pfam:PF02791 Pfam:PF10537
PROSITE:PS50827 PROSITE:PS51136 EMBL:AC138767 EMBL:AC154732
EMBL:CT030142 EMBL:AK135668 EMBL:AK166955 EMBL:AF033664
IPI:IPI00896695 UniGene:Mm.479583 IntAct:O88379 STRING:O88379
PhosphoSite:O88379 PaxDb:O88379 PRIDE:O88379
Ensembl:ENSMUST00000038926 UCSC:uc007nnz.2
GeneTree:ENSGT00660000095335 InParanoid:O88379 Bgee:O88379
CleanEx:MM_BAZ1A Genevestigator:O88379
GermOnline:ENSMUSG00000035021 Uniprot:O88379
Length = 1555
Score = 133 (51.9 bits), Expect = 0.00014, P = 0.00014
Identities = 19/55 (34%), Positives = 34/55 (61%)
Query: 311 TKHCKDCGCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCK 365
+K + C IC K + +++C+ C +H +C++P L++VP+ D WFCP C+
Sbjct: 1144 SKSILNARCKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKAVPDGD-WFCPECR 1197
>UNIPROTKB|Q38JA7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 KO:K11446 EMBL:DQ223016 RefSeq:NP_001041497.1
UniGene:Cfa.46487 ProteinModelPortal:Q38JA7 SMR:Q38JA7 PRIDE:Q38JA7
GeneID:491894 KEGG:cfa:491894 CTD:8242 InParanoid:Q38JA7
OrthoDB:EOG4894KP NextBio:20864597 Uniprot:Q38JA7
Length = 1556
Score = 133 (51.9 bits), Expect = 0.00014, P = 0.00014
Identities = 33/96 (34%), Positives = 48/96 (50%)
Query: 271 KIES--PKLLAERTAEDEDHMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSP 328
K+ES PK E + E+ H S EP T ++ N + + C +C+
Sbjct: 282 KVESTSPKTFLE-SKEELSH-SPEPCT--KMTMRLRR-NHSNAQFIESYVCRMCSRGDED 336
Query: 329 DKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSC 364
DKL++C+ C YHI+CL PPL +P+ W CP C
Sbjct: 337 DKLLLCDGCDDNYHIFCLLPPLPEIPKG-VWRCPKC 371
>UNIPROTKB|B0QZ44 [details] [associations]
symbol:KDM5C "Smcy homolog, X-linked (Mouse), isoform
CRA_a" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:CH471154 EMBL:AL139396 HOGENOM:HOG000290719
UniGene:Hs.631768 HGNC:HGNC:11114 ChiTaRS:KDM5C IPI:IPI00879547
SMR:B0QZ44 Ensembl:ENST00000404049 UCSC:uc004dsa.3
HOVERGEN:HBG068574 Uniprot:B0QZ44
Length = 1559
Score = 133 (51.9 bits), Expect = 0.00014, P = 0.00014
Identities = 33/96 (34%), Positives = 48/96 (50%)
Query: 271 KIES--PKLLAERTAEDEDHMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSP 328
K+ES PK E + E+ H S EP T ++ N + + C +C+
Sbjct: 281 KVESTSPKTFLE-SKEELSH-SPEPCT--KMTMRLRR-NHSNAQFIESYVCRMCSRGDED 335
Query: 329 DKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSC 364
DKL++C+ C YHI+CL PPL +P+ W CP C
Sbjct: 336 DKLLLCDGCDDNYHIFCLLPPLPEIPKG-VWRCPKC 370
>UNIPROTKB|P41229 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034720 "histone H3-K4 demethylation"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AL139396
eggNOG:NOG327026 GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719
CTD:8242 OrthoDB:EOG4894KP EMBL:L25270 EMBL:AK304732 EMBL:BC054499
EMBL:Z29650 IPI:IPI00013185 IPI:IPI00219412 IPI:IPI00640875
IPI:IPI01012687 PIR:I54361 RefSeq:NP_001140174.1 RefSeq:NP_004178.2
UniGene:Hs.631768 PDB:2JRZ PDBsum:2JRZ ProteinModelPortal:P41229
SMR:P41229 DIP:DIP-39663N IntAct:P41229 STRING:P41229
PhosphoSite:P41229 DMDM:117949812 PaxDb:P41229 PRIDE:P41229
DNASU:8242 Ensembl:ENST00000375379 Ensembl:ENST00000375383
Ensembl:ENST00000375401 Ensembl:ENST00000452825 GeneID:8242
KEGG:hsa:8242 UCSC:uc004drz.3 GeneCards:GC0XM053237 HGNC:HGNC:11114
MIM:300534 MIM:314690 neXtProt:NX_P41229 Orphanet:85279
PharmGKB:PA35964 InParanoid:P41229 OMA:ISWQGRA PhylomeDB:P41229
ChiTaRS:KDM5C EvolutionaryTrace:P41229 GenomeRNAi:8242
NextBio:31002 ArrayExpress:P41229 Bgee:P41229 CleanEx:HS_JARID1C
Genevestigator:P41229 GermOnline:ENSG00000126012 Uniprot:P41229
Length = 1560
Score = 133 (51.9 bits), Expect = 0.00014, P = 0.00014
Identities = 33/96 (34%), Positives = 48/96 (50%)
Query: 271 KIES--PKLLAERTAEDEDHMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSP 328
K+ES PK E + E+ H S EP T ++ N + + C +C+
Sbjct: 282 KVESTSPKTFLE-SKEELSH-SPEPCT--KMTMRLRR-NHSNAQFIESYVCRMCSRGDED 336
Query: 329 DKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSC 364
DKL++C+ C YHI+CL PPL +P+ W CP C
Sbjct: 337 DKLLLCDGCDDNYHIFCLLPPLPEIPKG-VWRCPKC 371
>UNIPROTKB|K7GNM7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:FP102491
Ensembl:ENSSSCT00000032687 Uniprot:K7GNM7
Length = 1560
Score = 133 (51.9 bits), Expect = 0.00014, P = 0.00014
Identities = 33/96 (34%), Positives = 48/96 (50%)
Query: 271 KIES--PKLLAERTAEDEDHMSTEPKTLRQIVPECTTCNDVETKHCKDCGCSICAGKTSP 328
K+ES PK E + E+ H S EP T ++ N + + C +C+
Sbjct: 282 KVESTSPKTFLE-SKEELSH-SPEPCT--KMTMRLRR-NHSNAQFIESYVCRMCSRGDED 336
Query: 329 DKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSC 364
DKL++C+ C YHI+CL PPL +P+ W CP C
Sbjct: 337 DKLLLCDGCDDNYHIFCLLPPLPEIPKG-VWRCPKC 371
>UNIPROTKB|F1P0H5 [details] [associations]
symbol:RPS27A "Ubiquitin-40S ribosomal protein S27a"
species:9031 "Gallus gallus" [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240
Pfam:PF01599 SMART:SM00213 Prosite:PS00299 GO:GO:0006412
GO:GO:0003735 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
GO:GO:0022627 InterPro:IPR019956 PRINTS:PR00348 OMA:KKVYTTP
GeneTree:ENSGT00550000074763 IPI:IPI00818312 EMBL:AADN02046834
EMBL:AADN02046833 Ensembl:ENSGALT00000040431 ArrayExpress:F1P0H5
Uniprot:F1P0H5
Length = 179
Score = 116 (45.9 bits), Expect = 0.00014, P = 0.00014
Identities = 28/93 (30%), Positives = 50/93 (53%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 23 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 81
Query: 61 NVNLNDV---IQLMIKADIDKNYQSSESSSKEN 90
N+ + + L ++ K + S ++ K+N
Sbjct: 82 NIQQQESTLHLVLRLRGGAKKRKKKSYTTPKKN 114
>UNIPROTKB|F1RZM3 [details] [associations]
symbol:RFPL4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00680000099707 EMBL:CU019570
Ensembl:ENSSSCT00000004891 Uniprot:F1RZM3
Length = 286
Score = 123 (48.4 bits), Expect = 0.00014, P = 0.00014
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 684 HIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCR 733
++Q++ C +C E+ + PITL C HTFC C++ K + D CP CR
Sbjct: 4 NLQDEAACTVCLEVFFSPITLSCTHTFCLYCMQSWMKEQEDLKLVCPMCR 53
>RGD|1564290 [details] [associations]
symbol:Rps27l3 "ribosomal protein S27-like 3" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000626
InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599 SMART:SM00213
RGD:1564290 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019956
PRINTS:PR00348 GeneTree:ENSGT00550000074763 IPI:IPI00475911
Ensembl:ENSRNOT00000027780 Uniprot:F1LU69
Length = 168
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 29/92 (31%), Positives = 49/92 (53%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K +L + I ++K QI++ P D+QRL + GKQLE L DY
Sbjct: 16 MQIFVKTLIG-KTIMLEVEPSDTIENVKAQIQDEEGTPPDQQRLTFAGKQLEGGRTLSDY 74
Query: 61 NVNLNDVIQLMIK--ADIDKNYQSSESSSKEN 90
NV + L+++ K + S ++ K+N
Sbjct: 75 NVQKESTLHLVLRLRGGAKKRKKKSYTTPKKN 106
>UNIPROTKB|I3LPZ1 [details] [associations]
symbol:TRIM4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070206 "protein trimerization" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0005886 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070206 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
PRINTS:PR01407 GeneTree:ENSGT00690000101646 OMA:WAICWSS
EMBL:FP102554 Ensembl:ENSSSCT00000024949 Uniprot:I3LPZ1
Length = 502
Score = 127 (49.8 bits), Expect = 0.00015, P = 0.00015
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 683 EHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNS--CPYCRKEMNKSC 740
E +QE+ C IC + P++++C H FC DCL+R + CN CP CR+ S
Sbjct: 4 EDLQEELSCSICLDYFEDPVSIECGHNFCRDCLRRGL---AQGCNQFPCPECRRPSTPSA 60
Query: 741 L 741
L
Sbjct: 61 L 61
>UNIPROTKB|E2QTX3 [details] [associations]
symbol:RFPL4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099707
EMBL:AAEX03008622 Ensembl:ENSCAFT00000006485 OMA:LRKVQCG
Uniprot:E2QTX3
Length = 270
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 25/65 (38%), Positives = 32/65 (49%)
Query: 685 IQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKSCLETH 744
+QE+ C IC E+ Y PI L C H FC C++R D ++CP CR LE
Sbjct: 5 LQEEVTCPICLEIFYCPILLSCDHIFCFHCMQRWVLEHRDLKSACPMCRGMTENPALEEW 64
Query: 745 SNDAL 749
AL
Sbjct: 65 QIGAL 69
>UNIPROTKB|F6TC96 [details] [associations]
symbol:BAG6 "Large proline-rich protein BAG6" species:9606
"Homo sapiens" [GO:0001822 "kidney development" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007130 "synaptonemal complex assembly" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0030544 "Hsp70 protein binding" evidence=IEA] [GO:0031593
"polyubiquitin binding" evidence=IEA] [GO:0032435 "negative
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0070059 "intrinsic apoptotic signaling pathway in
response to endoplasmic reticulum stress" evidence=IEA] [GO:0070628
"proteasome binding" evidence=IEA] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 Prosite:PS00299 GO:GO:0005737 GO:GO:0050821
GO:GO:0007420 GO:GO:0030324 GO:GO:0007283 GO:GO:0042127
EMBL:AL670886 EMBL:AL805934 EMBL:BX511262 EMBL:CR354443
EMBL:CR753842 EMBL:CR759761 GO:GO:0009790 GO:GO:0001822
GO:GO:0006511 EMBL:AL662847 EMBL:AL662801 EMBL:CR753892
GO:GO:0070059 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0032435
GO:GO:0007130 HGNC:HGNC:13919 ChiTaRS:BAG6 InterPro:IPR019954
IPI:IPI00792708 SMR:F6TC96 Ensembl:ENST00000419409
Ensembl:ENST00000420098 Ensembl:ENST00000433146
Ensembl:ENST00000437731 Ensembl:ENST00000442112
Ensembl:ENST00000447798 Ensembl:ENST00000454165 Uniprot:F6TC96
Length = 158
Score = 111 (44.1 bits), Expect = 0.00016, P = 0.00016
Identities = 31/112 (27%), Positives = 54/112 (48%)
Query: 3 VKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDYNV 62
V +++LD S+ ++ + + + K I ++ +P +KQRL Y+G+ L+D+ L +YNV
Sbjct: 19 VLVKTLD-SQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNV 77
Query: 63 NLNDVIQLMIKADIDKNYQSSESSSKENIQP-NGPACKPNINTENASSSGNN 113
VI L+ +A + S SS + +G P AS N
Sbjct: 78 G-GKVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRN 128
>ASPGD|ASPL0000049163 [details] [associations]
symbol:ubi4 species:162425 "Emericella nidulans"
[GO:0031386 "protein tag" evidence=ISA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
Prosite:PS00299 EMBL:BN001307 GO:GO:0016567 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR019954 InterPro:IPR019956
PRINTS:PR00348 EnsemblFungi:CADANIAT00008667 OMA:TTHQEEN
Uniprot:C8VLC7
Length = 305
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 25/73 (34%), Positives = 43/73 (58%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++KT+I++ +P D+QRL + GKQLED L DY
Sbjct: 229 MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 287
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 288 NIQKESTLHLVLR 300
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 25/73 (34%), Positives = 43/73 (58%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++KT+I++ +P D+QRL + GKQLED L DY
Sbjct: 77 MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 135
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 136 NIQKESTLHLVLR 148
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 25/73 (34%), Positives = 43/73 (58%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++KT+I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
Score = 119 (46.9 bits), Expect = 0.00046, P = 0.00046
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K++I++ +P D+QRL + GKQLED L DY
Sbjct: 153 MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 211
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 212 NIQKESTLHLVLR 224
>UNIPROTKB|F1NRC4 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 IPI:IPI00578699 EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 Ensembl:ENSGALT00000000582
ArrayExpress:F1NRC4 Uniprot:F1NRC4
Length = 1510
Score = 129 (50.5 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSC 364
C +C D+L++C+ C YH +CL PPL VP+ D W CP C
Sbjct: 275 CLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPQC 319
Score = 54 (24.1 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 54 EYMLFDYNVNLNDVIQLMI-KADI-----DKNYQSSESSSKENIQPNGPACKPNINTENA 107
E +L+ YN+ + L + K D+ DK Y+ + ++++QP+ +C P +
Sbjct: 142 ERILYPYNLFQSGASLLCLQKPDLTSDTKDKEYKPHDIPQRQSVQPS-ESCPPARRAKRL 200
Query: 108 SSSGNNTEPE 117
+ N + E
Sbjct: 201 RAEATNIKTE 210
Score = 47 (21.6 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 358 EWFCPSCKRDTSEVIAPGQKLKDSKKKARMASTNSKSTRDWGKGMA 403
E CP C T + +KLK+ + ST +S D + ++
Sbjct: 1051 EVLCPRCDIGTLGLKRKQKKLKEPMPSGKKRSTKLESLSDLERALS 1096
>UNIPROTKB|F1NUR9 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 IPI:IPI00823098
Ensembl:ENSGALT00000040834 ArrayExpress:F1NUR9 Uniprot:F1NUR9
Length = 1521
Score = 129 (50.5 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSC 364
C +C D+L++C+ C YH +CL PPL VP+ D W CP C
Sbjct: 286 CLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPQC 330
Score = 54 (24.1 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 54 EYMLFDYNVNLNDVIQLMI-KADI-----DKNYQSSESSSKENIQPNGPACKPNINTENA 107
E +L+ YN+ + L + K D+ DK Y+ + ++++QP+ +C P +
Sbjct: 153 ERILYPYNLFQSGASLLCLQKPDLTSDTKDKEYKPHDIPQRQSVQPS-ESCPPARRAKRL 211
Query: 108 SSSGNNTEPE 117
+ N + E
Sbjct: 212 RAEATNIKTE 221
Score = 47 (21.6 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 358 EWFCPSCKRDTSEVIAPGQKLKDSKKKARMASTNSKSTRDWGKGMA 403
E CP C T + +KLK+ + ST +S D + ++
Sbjct: 1062 EVLCPRCDIGTLGLKRKQKKLKEPMPSGKKRSTKLESLSDLERALS 1107
>UNIPROTKB|Q5F3R2 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0034721 "histone H3-K4 demethylation,
trimethyl-H3-K4-specific" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=ISS] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 EMBL:AJ851588
IPI:IPI00578699 RefSeq:NP_001026200.1 UniGene:Gga.7752 HSSP:Q14839
ProteinModelPortal:Q5F3R2 SMR:Q5F3R2 GeneID:421168 KEGG:gga:421168
CTD:10765 InParanoid:Q5F3R2 OrthoDB:EOG4HT8RC NextBio:20823981
Uniprot:Q5F3R2
Length = 1522
Score = 129 (50.5 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSC 364
C +C D+L++C+ C YH +CL PPL VP+ D W CP C
Sbjct: 287 CLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPQC 331
Score = 54 (24.1 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 54 EYMLFDYNVNLNDVIQLMI-KADI-----DKNYQSSESSSKENIQPNGPACKPNINTENA 107
E +L+ YN+ + L + K D+ DK Y+ + ++++QP+ +C P +
Sbjct: 154 ERILYPYNLFQSGASLLCLQKPDLTSDTKDKEYKPHDIPQRQSVQPS-ESCPPARRAKRL 212
Query: 108 SSSGNNTEPE 117
+ N + E
Sbjct: 213 RAEATNIKTE 222
Score = 47 (21.6 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 358 EWFCPSCKRDTSEVIAPGQKLKDSKKKARMASTNSKSTRDWGKGMA 403
E CP C T + +KLK+ + ST +S D + ++
Sbjct: 1063 EVLCPRCDIGTLGLKRKQKKLKEPMPSGKKRSTKLESLSDLERALS 1108
>UNIPROTKB|J9P601 [details] [associations]
symbol:J9P601 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000626
InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599 SMART:SM00213
Prosite:PS00299 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 OMA:FYKIDGS
GeneTree:ENSGT00550000074763 EMBL:AAEX03026776
Ensembl:ENSCAFT00000028891 Uniprot:J9P601
Length = 156
Score = 110 (43.8 bits), Expect = 0.00018, P = 0.00018
Identities = 28/92 (30%), Positives = 47/92 (51%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I + K +I + +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENEKAKILDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDV--IQLMIKADIDKNYQSSESSSKEN 90
N+ + L ++ K + S ++ K+N
Sbjct: 60 NIQKESTPHLVLRLRGGAKKRKKKSYTTPKKN 91
>UNIPROTKB|Q9UGL1 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IDA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone H3-K4
demethylation" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0034721 "histone
H3-K4 demethylation, trimethyl-H3-K4-specific" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GO:GO:0034647 KO:K11446
HOGENOM:HOG000290719 HSSP:Q14839 CTD:10765 OrthoDB:EOG4HT8RC
EMBL:AJ132440 EMBL:AF087481 EMBL:AJ243706 EMBL:AC098934
EMBL:AC104463 IPI:IPI00847436 IPI:IPI00873956 RefSeq:NP_006609.3
UniGene:Hs.443650 ProteinModelPortal:Q9UGL1 SMR:Q9UGL1
DIP:DIP-53652N IntAct:Q9UGL1 STRING:Q9UGL1 PhosphoSite:Q9UGL1
DMDM:296439317 PaxDb:Q9UGL1 PRIDE:Q9UGL1 Ensembl:ENST00000367264
Ensembl:ENST00000367265 GeneID:10765 KEGG:hsa:10765 UCSC:uc001gyf.3
UCSC:uc009xag.3 GeneCards:GC01M202696 H-InvDB:HIX0001478
HGNC:HGNC:18039 HPA:HPA027179 MIM:605393 neXtProt:NX_Q9UGL1
PharmGKB:PA164721626 InParanoid:Q9UGL1 OMA:CENEKEM ChiTaRS:KDM5B
GenomeRNAi:10765 NextBio:40877 ArrayExpress:Q9UGL1 Bgee:Q9UGL1
CleanEx:HS_JARID1B Genevestigator:Q9UGL1 Uniprot:Q9UGL1
Length = 1544
Score = 129 (50.5 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSC 364
C +C D+L++C+ C YH +CL PPL VP+ D W CP C
Sbjct: 312 CLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPKC 356
Score = 55 (24.4 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 18/78 (23%), Positives = 38/78 (48%)
Query: 54 EYMLFDYNVNLN-DVIQLMIKADI-----DKNYQSSESSSKENIQPNGPACKPNINTENA 107
E +L YN+ L+ D ++ + K ++ DK Y+ + ++++QP+ C P +
Sbjct: 176 ERILNPYNLFLSGDSLRCLQKPNLTTDTKDKEYKPHDIPQRQSVQPS-ETCPPARRAKRM 234
Query: 108 SSSGNNT--EPEDFVDLK 123
+ N EPE+ + +
Sbjct: 235 RAEAMNIKIEPEETTEAR 252
Score = 46 (21.3 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 21/72 (29%), Positives = 28/72 (38%)
Query: 670 IKALCKEGQKEVLEHIQEKFLCIICQELVYK---PITLDCVHTFCHDCLKRAFKIESDAC 726
I CK G L H++E LC C YK TLD ++ + RA A
Sbjct: 704 ISCSCKPGLLVCLHHVKE--LCS-CPPYKYKLRYRYTLDDLYPMMNALKLRAESYNEWAL 760
Query: 727 NSCPYCRKEMNK 738
N ++NK
Sbjct: 761 NVNEALEAKINK 772
>MGI|MGI:2664992 [details] [associations]
symbol:Trim50 "tripartite motif-containing 50" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016235 "aggresome" evidence=IDA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0070201 "regulation of establishment of protein localization"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 MGI:MGI:2664992
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 GeneTree:ENSGT00680000099496 CTD:135892
eggNOG:NOG245385 HOVERGEN:HBG106596 KO:K12024 EMBL:AY081947
IPI:IPI00408393 RefSeq:NP_839971.1 UniGene:Mm.261834
ProteinModelPortal:Q810I2 SMR:Q810I2 STRING:Q810I2
PhosphoSite:Q810I2 PRIDE:Q810I2 Ensembl:ENSMUST00000065785
GeneID:215061 KEGG:mmu:215061 UCSC:uc008zyf.1 NextBio:374596
CleanEx:MM_TRIM50 Genevestigator:Q810I2 Uniprot:Q810I2
Length = 483
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 25/77 (32%), Positives = 44/77 (57%)
Query: 685 IQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFK-IESDACNSCPYCRKEMNKSCLET 743
+Q++ C IC E+ +P+ L C H++C DCL + ++S+ C CP CR+ ++ C +
Sbjct: 10 LQDQLQCPICLEVFKEPLMLQCGHSYCKDCLDNLSQHLDSELC--CPVCRQSVD--CSSS 65
Query: 744 HSNDALQSILSTL-FPG 759
N +L ++ L PG
Sbjct: 66 PPNVSLARVIDALRLPG 82
>ZFIN|ZDB-GENE-091118-99 [details] [associations]
symbol:si:ch211-244o18.1 "si:ch211-244o18.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 ZFIN:ZDB-GENE-091118-99 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
GeneTree:ENSGT00690000101661 EMBL:BX294167 IPI:IPI00993170
Ensembl:ENSDART00000133525 Uniprot:F1R5P1
Length = 589
Score = 127 (49.8 bits), Expect = 0.00019, P = 0.00019
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 314 CKDCG-CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSC 364
C +C C C + P +L++C++C YH +CL PPL++VP+ W C C
Sbjct: 13 CLECTVCEACGQASDPGRLLLCDDCDISYHTYCLDPPLQNVPKGS-WKCKWC 63
>TAIR|locus:2151997 [details] [associations]
symbol:AT5G47150 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0042393 "histone binding"
evidence=IEA] InterPro:IPR003105 Pfam:PF02182 PROSITE:PS51015
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB025609
EMBL:AB018117 eggNOG:COG3440 Gene3D:2.30.280.10 IPI:IPI00521351
RefSeq:NP_199526.1 UniGene:At.29911 ProteinModelPortal:Q9FHI0
SMR:Q9FHI0 DNASU:834761 EnsemblPlants:AT5G47150.1 GeneID:834761
KEGG:ath:AT5G47150 TAIR:At5g47150 HOGENOM:HOG000152471
InParanoid:Q9FHI0 OMA:YATSSHR PhylomeDB:Q9FHI0
ProtClustDB:CLSN2914894 Genevestigator:Q9FHI0 Uniprot:Q9FHI0
Length = 328
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 38/119 (31%), Positives = 58/119 (48%)
Query: 420 GPIPGIEVGQSYLYRFQASEAGVHRPHVSGIHG---REDVGAFSLVLSGGYE-DDVDDGD 475
G +PGI +G + Y+ + G+H + GI +D S+V S GY +D +
Sbjct: 176 GSVPGINIGDVFQYKTELRVVGLHSKPMCGIDYIKLGDDRITTSIVASEGYGYNDTYNSG 235
Query: 476 SFLYTGSGGRDLSGNKRTSVQSFDQTLTRMNKALARNCNAPIDDK--RGNEAVDWKKGK 532
+YTG GG ++ K+T DQ L + N ALA + + RG E +D +KGK
Sbjct: 236 VMVYTGEGGNVINKQKKTE----DQKLVKGNLALATSMRQKSQVRVIRGEERLD-RKGK 289
>UNIPROTKB|G5E5K7 [details] [associations]
symbol:TRIM49 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00670000097491 OMA:NDSWARE EMBL:DAAA02062394
ProteinModelPortal:G5E5K7 PRIDE:G5E5K7 Ensembl:ENSBTAT00000023900
NextBio:20900389 Uniprot:G5E5K7
Length = 451
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 27/75 (36%), Positives = 40/75 (53%)
Query: 680 EVLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKS 739
+ L+ Q + C IC + P+T+DC H+FC CL ++ ES SCP CR+ S
Sbjct: 4 DTLQVFQSELTCSICTKCFLDPVTIDCGHSFCRPCLSLCWE-ESQTPRSCPECREIPEWS 62
Query: 740 CLETHSNDALQSILS 754
+T N AL+ + S
Sbjct: 63 DFKT--NIALKRLAS 75
>CGD|CAL0004945 [details] [associations]
symbol:UBI4 species:5476 "Candida albicans" [GO:0016567
"protein ubiquitination" evidence=IGI;ISS;IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0000902 "cell morphogenesis"
evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0031386 "protein tag" evidence=IGI;ISS] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0033554 "cellular response
to stress" evidence=IEP;IMP] [GO:0034605 "cellular response to
heat" evidence=IMP] [GO:0044182 "filamentous growth of a population
of unicellular organisms" evidence=IMP] [GO:0036166 "phenotypic
switching" evidence=IMP] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 CGD:CAL0004945 Prosite:PS00299 GO:GO:0005886
GO:GO:0034605 GO:GO:0009405 GO:GO:0016567 GO:GO:0000902
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0031386 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0044182 GO:GO:0036166 EMBL:AACQ01000029
EMBL:AACQ01000028 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 KO:K08770 RefSeq:XP_719750.1
RefSeq:XP_719867.1 ProteinModelPortal:Q5ADS0 SMR:Q5ADS0
STRING:Q5ADS0 GeneID:3638432 GeneID:3638649 KEGG:cal:CaO19.14063
KEGG:cal:CaO19.6771 Uniprot:Q5ADS0
Length = 229
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K++I++ +P D+QRL + GKQLED L DY
Sbjct: 153 MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 211
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 212 NIQKESTLHLVLR 224
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K++I++ +P D+QRL + GKQLED L DY
Sbjct: 77 MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 135
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 136 NIQKESTLHLVLR 148
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K++I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>UNIPROTKB|Q5ADS0 [details] [associations]
symbol:UBI4 "Putative uncharacterized protein UBI4"
species:237561 "Candida albicans SC5314" [GO:0000902 "cell
morphogenesis" evidence=IMP] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IGI;ISS;IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0031386 "protein tag"
evidence=IGI;ISS] [GO:0033554 "cellular response to stress"
evidence=IEP;IMP] [GO:0034605 "cellular response to heat"
evidence=IMP] [GO:0036166 "phenotypic switching" evidence=IMP]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 CGD:CAL0004945 Prosite:PS00299 GO:GO:0005886
GO:GO:0034605 GO:GO:0009405 GO:GO:0016567 GO:GO:0000902
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0031386 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0044182 GO:GO:0036166 EMBL:AACQ01000029
EMBL:AACQ01000028 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 KO:K08770 RefSeq:XP_719750.1
RefSeq:XP_719867.1 ProteinModelPortal:Q5ADS0 SMR:Q5ADS0
STRING:Q5ADS0 GeneID:3638432 GeneID:3638649 KEGG:cal:CaO19.14063
KEGG:cal:CaO19.6771 Uniprot:Q5ADS0
Length = 229
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K++I++ +P D+QRL + GKQLED L DY
Sbjct: 153 MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 211
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 212 NIQKESTLHLVLR 224
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K++I++ +P D+QRL + GKQLED L DY
Sbjct: 77 MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 135
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 136 NIQKESTLHLVLR 148
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K++I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>TAIR|locus:2827139 [details] [associations]
symbol:UBQ12 "AT1G55060" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=TAS] [GO:0006464
"cellular protein modification process" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005737
GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 EMBL:AC073944 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 KO:K08770 UniGene:At.25274 UniGene:At.47590
IPI:IPI00539232 RefSeq:NP_564675.1 UniGene:At.49314
ProteinModelPortal:Q3E7K8 SMR:Q3E7K8 STRING:Q3E7K8 PaxDb:Q3E7K8
PRIDE:Q3E7K8 EnsemblPlants:AT1G55060.1 GeneID:841949
KEGG:ath:AT1G55060 TAIR:At1g55060 InParanoid:Q3E7K8 OMA:HEDGRTL
PhylomeDB:Q3E7K8 ProtClustDB:CLSN2688814 Genevestigator:Q3E7K8
Uniprot:Q3E7K8
Length = 230
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 77 MQIFVKTLTG-KTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 135
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 136 NIQKESTLHLVLR 148
Score = 116 (45.9 bits), Expect = 0.00048, P = 0.00048
Identities = 25/73 (34%), Positives = 43/73 (58%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K VL + I ++K +I++ +P D+ RL + GKQLED L DY
Sbjct: 1 MQIFLKTLTG-KTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADY 59
Query: 61 NVNLNDVIQLMIK 73
NV + + L+++
Sbjct: 60 NVQEDSTLHLLLR 72
>UNIPROTKB|A8DZJ1 [details] [associations]
symbol:baz1b "Tyrosine-protein kinase BAZ1B" species:8355
"Xenopus laevis" [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0004713 "protein tyrosine kinase activity" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0016572 "histone phosphorylation" evidence=ISS] [GO:0035173
"histone kinase activity" evidence=ISS] [GO:0070577 "histone
acetyl-lysine binding" evidence=ISS] InterPro:IPR001841
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00297
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 GO:GO:0006974 GO:GO:0004715
GO:GO:0004713 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016585 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 GO:GO:0070577 InterPro:IPR018501 InterPro:IPR013136
Pfam:PF10537 PROSITE:PS50827 PROSITE:PS51136 CTD:9031 KO:K11658
GO:GO:0035173 EMBL:AM084226 EMBL:BC072944 EMBL:BC126047
RefSeq:NP_001136259.1 UniGene:Xl.16009 IntAct:A8DZJ1 PRIDE:A8DZJ1
GeneID:443594 KEGG:xla:443594 Xenbase:XB-GENE-866493 Uniprot:A8DZJ1
Length = 1441
Score = 151 (58.2 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 26/64 (40%), Positives = 41/64 (64%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTSEVIAPGQKL 378
C +C K DKLI+C+EC +H++CL+P L ++P D EW CP+C+ T+ + G+
Sbjct: 1154 CKVCRKKGEDDKLILCDECNKAFHLFCLRPVLFNIP-DGEWLCPACQPATARRSSRGRNY 1212
Query: 379 -KDS 381
+DS
Sbjct: 1213 AEDS 1216
Score = 39 (18.8 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 130 YKVGDYVDAILETEGAWFESQITHILVDINKEK 162
Y V D+VDA + G ++ ++ IL N +K
Sbjct: 737 YSVQDHVDAKQQRSGELWKERLA-ILKGENDKK 768
Score = 37 (18.1 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 68 IQLMIKADIDKNYQSSESSSKENIQPNG 95
+QLMI A+++K + S K+ + NG
Sbjct: 357 MQLMIGANLNKKGSIGKKSDKKKPK-NG 383
>UNIPROTKB|Q3ZEE5 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9580 "Hylobates lar" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY923180 ProteinModelPortal:Q3ZEE5
SMR:Q3ZEE5 Uniprot:Q3ZEE5
Length = 493
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 681 VLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIES-DACNSCPYCR 733
+L +++E+ C IC EL+ +P++LDC H+FC CL K D SCP CR
Sbjct: 5 ILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKTSMPDGERSCPVCR 58
>UNIPROTKB|A6NI17 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX088647 HOGENOM:HOG000234133 EMBL:BX005441
EMBL:CR759838 HGNC:HGNC:16289 eggNOG:NOG310139 HOVERGEN:HBG083771
EMBL:BX897730 EMBL:CR759801 EMBL:CT009552 IPI:IPI00744105
SMR:A6NI17 Ensembl:ENST00000546863 Ensembl:ENST00000550119
Ensembl:ENST00000550679 Uniprot:A6NI17
Length = 425
Score = 124 (48.7 bits), Expect = 0.00024, P = 0.00024
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 680 EVLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACN--SCPYCRKEMN 737
+ + +QE+ +C IC +++ KP+T+DC H FC C+ + I +C CP C+ +
Sbjct: 5 QFVNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQ---IGETSCGFFKCPLCKTSVR 61
Query: 738 KSCLETHS 745
K+ + +S
Sbjct: 62 KNAIRFNS 69
>UNIPROTKB|C9JJD5 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX322644 HGNC:HGNC:16289 eggNOG:NOG310139
IPI:IPI01022309 ProteinModelPortal:C9JJD5 SMR:C9JJD5
Ensembl:ENST00000550348 Uniprot:C9JJD5
Length = 425
Score = 124 (48.7 bits), Expect = 0.00024, P = 0.00024
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 680 EVLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACN--SCPYCRKEMN 737
+ + +QE+ +C IC +++ KP+T+DC H FC C+ + I +C CP C+ +
Sbjct: 5 QFVNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQ---IGETSCGFFKCPLCKTSVR 61
Query: 738 KSCLETHS 745
K+ + +S
Sbjct: 62 KNAIRFNS 69
>UNIPROTKB|E7ETS6 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CR753815 HGNC:HGNC:16289 IPI:IPI01021215
ProteinModelPortal:E7ETS6 SMR:E7ETS6 Ensembl:ENST00000552122
ArrayExpress:E7ETS6 Uniprot:E7ETS6
Length = 425
Score = 124 (48.7 bits), Expect = 0.00024, P = 0.00024
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 680 EVLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACN--SCPYCRKEMN 737
+ + +QE+ +C IC +++ KP+T+DC H FC C+ + I +C CP C+ +
Sbjct: 5 QFVNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQ---IGETSCGFFKCPLCKTSVR 61
Query: 738 KSCLETHS 745
K+ + +S
Sbjct: 62 KNAIRFNS 69
>UNIPROTKB|F8W1J7 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL671859 HGNC:HGNC:16289 IPI:IPI01021230
ProteinModelPortal:F8W1J7 SMR:F8W1J7 Ensembl:ENST00000550336
Uniprot:F8W1J7
Length = 425
Score = 124 (48.7 bits), Expect = 0.00024, P = 0.00024
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 680 EVLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACN--SCPYCRKEMN 737
+ + +QE+ +C IC +++ KP+T+DC H FC C+ + I +C CP C+ +
Sbjct: 5 QFVNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQ---IGETSCGFFKCPLCKTSVR 61
Query: 738 KSCLETHS 745
K+ + +S
Sbjct: 62 KNAIRFNS 69
>UNIPROTKB|G8JLN1 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL671859 HGNC:HGNC:16289 SMR:G8JLN1
Ensembl:ENST00000455349 Ensembl:ENST00000552059 Uniprot:G8JLN1
Length = 425
Score = 124 (48.7 bits), Expect = 0.00024, P = 0.00024
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 680 EVLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACN--SCPYCRKEMN 737
+ + +QE+ +C IC +++ KP+T+DC H FC C+ + I +C CP C+ +
Sbjct: 5 QFVNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQ---IGETSCGFFKCPLCKTSVR 61
Query: 738 KSCLETHS 745
K+ + +S
Sbjct: 62 KNAIRFNS 69
>UNIPROTKB|Q9BZY9 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR020457 Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005739 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL669914 EMBL:AL671859 EMBL:CR753815
EMBL:AF230386 EMBL:AF230387 EMBL:BT006675 EMBL:AK222729
EMBL:BX322644 EMBL:BC016866 EMBL:BC017017 EMBL:Y07828
IPI:IPI00292397 IPI:IPI00292398 RefSeq:NP_008959.3
UniGene:Hs.493275 PDB:2YSJ PDB:2YSL PDBsum:2YSJ PDBsum:2YSL
ProteinModelPortal:Q9BZY9 SMR:Q9BZY9 IntAct:Q9BZY9 STRING:Q9BZY9
DMDM:68068082 PRIDE:Q9BZY9 DNASU:11074 Ensembl:ENST00000357569
Ensembl:ENST00000376734 Ensembl:ENST00000433864
Ensembl:ENST00000445679 Ensembl:ENST00000449412
Ensembl:ENST00000453266 Ensembl:ENST00000540829
Ensembl:ENST00000547935 Ensembl:ENST00000550451
Ensembl:ENST00000551027 Ensembl:ENST00000552274
Ensembl:ENST00000552311 GeneID:11074 KEGG:hsa:11074 UCSC:uc003npg.1
CTD:11074 GeneCards:GC06M030073 H-InvDB:HIX0005686
H-InvDB:HIX0166392 HGNC:HGNC:16289 HPA:HPA046400 MIM:609316
neXtProt:NX_Q9BZY9 PharmGKB:PA38117 eggNOG:NOG310139
HOVERGEN:HBG083771 KO:K12011 OMA:EFQFLNP OrthoDB:EOG4K0QNJ
EvolutionaryTrace:Q9BZY9 GenomeRNAi:11074 NextBio:42098
ArrayExpress:Q9BZY9 Bgee:Q9BZY9 Genevestigator:Q9BZY9
GermOnline:ENSG00000204616 Uniprot:Q9BZY9
Length = 425
Score = 124 (48.7 bits), Expect = 0.00024, P = 0.00024
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 680 EVLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACN--SCPYCRKEMN 737
+ + +QE+ +C IC +++ KP+T+DC H FC C+ + I +C CP C+ +
Sbjct: 5 QFVNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQ---IGETSCGFFKCPLCKTSVR 61
Query: 738 KSCLETHS 745
K+ + +S
Sbjct: 62 KNAIRFNS 69
>ZFIN|ZDB-GENE-060810-140 [details] [associations]
symbol:trim105 "tripartite motif containing 105"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 ZFIN:ZDB-GENE-060810-140 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104222 OMA:VEPMRIC EMBL:CR627495
IPI:IPI00993660 Ensembl:ENSDART00000080247 ArrayExpress:F1QCZ4
Bgee:F1QCZ4 Uniprot:F1QCZ4
Length = 426
Score = 124 (48.7 bits), Expect = 0.00024, P = 0.00024
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 685 IQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFK-IESDACNSCPYCRKEM-NKSCLE 742
++E C IC EL +P+ L C+H FC C+ +K + S +CP CR+E NK C +
Sbjct: 10 LREDLTCAICFELFKEPVMLGCMHHFCRRCIVSYWKSVRSPV--TCPQCRQEFPNKCCFQ 67
Query: 743 TH 744
T+
Sbjct: 68 TN 69
>UNIPROTKB|J3QKN0 [details] [associations]
symbol:UBB "Ubiquitin" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC093484 HGNC:HGNC:12463
ChiTaRS:UBB Ensembl:ENST00000577640 Uniprot:J3QKN0
Length = 206
Score = 117 (46.2 bits), Expect = 0.00025, P = 0.00025
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 77 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 135
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 136 NIQKESTLHLVLR 148
Score = 117 (46.2 bits), Expect = 0.00025, P = 0.00025
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>WB|WBGene00001470 [details] [associations]
symbol:flt-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001739 InterPro:IPR001965
InterPro:IPR016177 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01429 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 SMART:SM00297 SMART:SM00391
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:FO080623
RefSeq:NP_498673.3 ProteinModelPortal:Q23590 SMR:Q23590
PaxDb:Q23590 EnsemblMetazoa:ZK783.4 GeneID:176078
KEGG:cel:CELE_ZK783.4 UCSC:ZK783.4 CTD:176078 WormBase:ZK783.4
HOGENOM:HOG000015886 NextBio:891018 Uniprot:Q23590
Length = 1390
Score = 138 (53.6 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 50/189 (26%), Positives = 91/189 (48%)
Query: 186 MKFDDI-RPLPKHLITEFNENLIGVRVMGNYNAEEPRERGYWHDMIIEKKQGKRLTTELI 244
+K D+ +PLP E + ++ M A+ ++ W +I E+ G+ EL
Sbjct: 976 LKMSDVSKPLPSITPFETQKPIVVPPTMAL--AQIVKDDMAWK-VIDEEVDGQ----ELD 1028
Query: 245 ATVFIGKKGLETRLENCKIKFVKELY-KIESPKLLAERTAED-EDHMSTEPKTLRQIVPE 302
T+ I +K +ET + + KF + + K+E + ED + ++STE +T Q++
Sbjct: 1029 ETI-IRQKIIETA-DMVQPKFWRPKFQKLEDQDTC--QLFEDWKSYVSTEAQTTSQLMVA 1084
Query: 303 CTTCNDVET--KHCKDCGCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWF 360
T + + ++ C IC D+++VC+ C+ H+ C +P + VPE D WF
Sbjct: 1085 LQTLEGMIMWERSSREALCQICKSMDG-DEMLVCDGCESGCHMECFRPRMTKVPEGD-WF 1142
Query: 361 CPSCKRDTS 369
C C+ + S
Sbjct: 1143 CQRCREEKS 1151
Score = 43 (20.2 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 675 KEGQKEVLEHIQEKFLCIICQEL 697
++G KE + E F+C CQE+
Sbjct: 1182 QDGPKEAIN--PETFICGHCQEM 1202
>UNIPROTKB|E7EQQ5 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HGNC:HGNC:16276 ChiTaRS:TRIM5 EMBL:AC109341
IPI:IPI00879744 ProteinModelPortal:E7EQQ5 SMR:E7EQQ5
Ensembl:ENST00000412903 ArrayExpress:E7EQQ5 Bgee:E7EQQ5
Uniprot:E7EQQ5
Length = 209
Score = 117 (46.2 bits), Expect = 0.00026, P = 0.00026
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 681 VLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFK--IESDACNSCPYCR 733
+L +++E+ C IC EL+ +P++LDC H+FC CL K + +SCP CR
Sbjct: 5 ILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCR 59
>UNIPROTKB|P61282 [details] [associations]
symbol:NEDD8 "NEDD8" species:9913 "Bos taurus" [GO:0008104
"protein localization" evidence=ISS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 Prosite:PS00299 GO:GO:0005634 GO:GO:0008104
GO:GO:0006357 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 HOVERGEN:HBG000057 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 EMBL:AF227256 EMBL:BC102306 IPI:IPI00688362
RefSeq:NP_777189.1 UniGene:Bt.275 ProteinModelPortal:P61282
SMR:P61282 STRING:P61282 PRIDE:P61282 GeneID:286796 KEGG:bta:286796
CTD:4738 InParanoid:P61282 KO:K12158 OrthoDB:EOG4N04GQ
NextBio:20806450 Uniprot:P61282
Length = 81
Score = 101 (40.6 bits), Expect = 0.00027, P = 0.00027
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M +K+++L G K + + + +K ++E +P +QRL Y GKQ+ DE DY
Sbjct: 1 MLIKVKTLTG-KEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADY 59
Query: 61 NVNLNDVIQLMI 72
+ V+ L++
Sbjct: 60 KILGGSVLHLVL 71
>UNIPROTKB|E9PMW5 [details] [associations]
symbol:TRIM3 "Tripartite motif-containing protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC084337 InterPro:IPR017907 IPI:IPI00985414
HGNC:HGNC:10064 ProteinModelPortal:E9PMW5 SMR:E9PMW5
Ensembl:ENST00000529529 ArrayExpress:E9PMW5 Bgee:E9PMW5
Uniprot:E9PMW5
Length = 96
Score = 101 (40.6 bits), Expect = 0.00027, P = 0.00027
Identities = 28/85 (32%), Positives = 41/85 (48%)
Query: 682 LEHIQEKFL-CIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKSC 740
++ + ++FL C IC + P L C+HTFC CL+ +S SCP CR+ S
Sbjct: 12 VQPMDKQFLVCSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSLTL-SCPVCRQT---SI 67
Query: 741 LETHSNDALQS--ILSTLFPGYSSA 763
L ALQ+ +S+L A
Sbjct: 68 LPEQGVSALQNNFFISSLMEAMQQA 92
>UNIPROTKB|J3KSI2 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HGNC:HGNC:17765 EMBL:AC011825 Ensembl:ENST00000578107
Uniprot:J3KSI2
Length = 108
Score = 101 (40.6 bits), Expect = 0.00027, P = 0.00027
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 684 HIQEKFLCIICQELVYKPI-TLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNK 738
+ ++ F C +CQE++ P+ T C H FC C A + ES A CP CR + +
Sbjct: 11 YTEDDFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMR-ESGA--HCPLCRGNVTR 63
>UNIPROTKB|Q15843 [details] [associations]
symbol:NEDD8 "NEDD8" species:9606 "Homo sapiens"
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0014070 "response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0045116 "protein neddylation" evidence=IDA] [GO:0006464
"cellular protein modification process" evidence=TAS] [GO:0006508
"proteolysis" evidence=TAS] [GO:0009653 "anatomical structure
morphogenesis" evidence=TAS] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 EMBL:D23662 Prosite:PS00299 GO:GO:0005634
GO:GO:0008104 GO:GO:0006357 GO:GO:0014070 GO:GO:0006511
GO:GO:0009653 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 PDB:3DQV PDBsum:3DQV GO:GO:0045116
HOVERGEN:HBG000057 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 PDB:2NVU PDBsum:2NVU CTD:4738 KO:K12158
OrthoDB:EOG4N04GQ OMA:EPTDKVD EMBL:CR407662 EMBL:BC104200
EMBL:BC104201 EMBL:BC104664 IPI:IPI00020008 RefSeq:NP_006147.1
UniGene:Hs.531064 PDB:1NDD PDB:1R4M PDB:1R4N PDB:1XT9 PDB:2BKR
PDB:2KO3 PDB:3DBH PDB:3DBL PDB:3DBR PDB:3GZN PDB:4F8C PDB:4FBJ
PDB:4HCP PDBsum:1NDD PDBsum:1R4M PDBsum:1R4N PDBsum:1XT9
PDBsum:2BKR PDBsum:2KO3 PDBsum:3DBH PDBsum:3DBL PDBsum:3DBR
PDBsum:3GZN PDBsum:4F8C PDBsum:4FBJ PDBsum:4HCP
ProteinModelPortal:Q15843 SMR:Q15843 DIP:DIP-29266N IntAct:Q15843
MINT:MINT-268324 STRING:Q15843 PhosphoSite:Q15843 DMDM:2833270
PaxDb:Q15843 PeptideAtlas:Q15843 PRIDE:Q15843
Ensembl:ENST00000250495 GeneID:4738 KEGG:hsa:4738 UCSC:uc001wnn.2
GeneCards:GC14M024686 HGNC:HGNC:7732 HPA:CAB004082 MIM:603171
neXtProt:NX_Q15843 PharmGKB:PA31537 InParanoid:Q15843
PhylomeDB:Q15843 EvolutionaryTrace:Q15843 GenomeRNAi:4738
NextBio:18272 PMAP-CutDB:Q15843 ArrayExpress:Q15843 Bgee:Q15843
CleanEx:HS_NEDD8 Genevestigator:Q15843 GermOnline:ENSG00000129559
Uniprot:Q15843
Length = 81
Score = 101 (40.6 bits), Expect = 0.00027, P = 0.00027
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M +K+++L G K + + + +K ++E +P +QRL Y GKQ+ DE DY
Sbjct: 1 MLIKVKTLTG-KEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADY 59
Query: 61 NVNLNDVIQLMI 72
+ V+ L++
Sbjct: 60 KILGGSVLHLVL 71
>MGI|MGI:97301 [details] [associations]
symbol:Nedd8 "neural precursor cell expressed, developmentally
down-regulated gene 8" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISA;IDA] [GO:0006357 "regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0008104 "protein
localization" evidence=IDA] [GO:0014070 "response to organic cyclic
compound" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=ISO] [GO:0045116 "protein neddylation"
evidence=ISO;ISS;ISA] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
MGI:MGI:97301 Prosite:PS00299 GO:GO:0005634 GO:GO:0008104
GO:GO:0006357 GO:GO:0014070 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019954 eggNOG:COG5272 GO:GO:0045116 HOVERGEN:HBG000057
InterPro:IPR019956 PRINTS:PR00348 HOGENOM:HOG000233942 CTD:4738
KO:K12158 OrthoDB:EOG4N04GQ OMA:EPTDKVD EMBL:D10918 EMBL:BC004625
IPI:IPI00127021 PIR:JN0710 RefSeq:NP_032709.1 UniGene:Mm.296566
ProteinModelPortal:P29595 SMR:P29595 STRING:P29595
PhosphoSite:P29595 PaxDb:P29595 PRIDE:P29595
Ensembl:ENSMUST00000010520 Ensembl:ENSMUST00000163750 GeneID:18002
KEGG:mmu:18002 InParanoid:P29595 NextBio:293003 Bgee:P29595
Genevestigator:P29595 GermOnline:ENSMUSG00000010376 Uniprot:P29595
Length = 81
Score = 101 (40.6 bits), Expect = 0.00027, P = 0.00027
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M +K+++L G K + + + +K ++E +P +QRL Y GKQ+ DE DY
Sbjct: 1 MLIKVKTLTG-KEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADY 59
Query: 61 NVNLNDVIQLMI 72
+ V+ L++
Sbjct: 60 KILGGSVLHLVL 71
>RGD|3158 [details] [associations]
symbol:Nedd8 "neural precursor cell expressed, developmentally
down-regulated 8" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008104
"protein localization" evidence=IEA;ISO] [GO:0014070 "response to
organic cyclic compound" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA;ISO] [GO:0045116 "protein neddylation"
evidence=ISO;IDA] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
RGD:3158 Prosite:PS00299 GO:GO:0005634 GO:GO:0008104 GO:GO:0006357
GO:GO:0014070 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0045116 HOVERGEN:HBG000057 InterPro:IPR019956
PRINTS:PR00348 HOGENOM:HOG000233942 CTD:4738 KO:K12158
OrthoDB:EOG4N04GQ GeneTree:ENSGT00660000095622 EMBL:AF095740
EMBL:BC084728 IPI:IPI00196202 RefSeq:NP_620233.1 UniGene:Rn.216415
ProteinModelPortal:Q71UE8 SMR:Q71UE8 STRING:Q71UE8 PhosphoSite:Q71UE8
PRIDE:Q71UE8 Ensembl:ENSRNOT00000064916 GeneID:25490 KEGG:rno:25490
UCSC:RGD:3158 InParanoid:Q71UE8 NextBio:606857 ArrayExpress:Q71UE8
Genevestigator:Q71UE8 GermOnline:ENSRNOG00000019895 Uniprot:Q71UE8
Length = 81
Score = 101 (40.6 bits), Expect = 0.00027, P = 0.00027
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M +K+++L G K + + + +K ++E +P +QRL Y GKQ+ DE DY
Sbjct: 1 MLIKVKTLTG-KEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADY 59
Query: 61 NVNLNDVIQLMI 72
+ V+ L++
Sbjct: 60 KILGGSVLHLVL 71
>GENEDB_PFALCIPARUM|PF11_0244 [details] [associations]
symbol:PF11_0244 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AE014186 RefSeq:XP_001347915.1
ProteinModelPortal:Q8IID0 IntAct:Q8IID0 MINT:MINT-1640413
PRIDE:Q8IID0 EnsemblProtists:PF11_0244:mRNA GeneID:810791
KEGG:pfa:PF11_0244 EuPathDB:PlasmoDB:PF3D7_1123300
ProtClustDB:CLSZ2432487 Uniprot:Q8IID0
Length = 689
Score = 126 (49.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 28/91 (30%), Positives = 48/91 (52%)
Query: 647 YTLPS-SVLEHINNDTVHSNVWDEIKALCKEGQKEVLEHIQEKFLCIICQELVYKPITLD 705
YT + S+ + INN+ V + E C ++++ ++ C IC +L+ P+T+
Sbjct: 188 YTCTNTSIDKEINNNNVKNKKQKE----CINNEEKIPSEVE----CAICMKLLIVPVTIP 239
Query: 706 CVHTFCHDCLKRAFKIESDACNSCPYCRKEM 736
C H FC DC+++A + + N CP CR M
Sbjct: 240 CGHNFCRDCIEKAKEYK----NLCPLCRSNM 266
Score = 48 (22.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 77 DKNYQSSESSSKENIQPNGPACKPNINTENA-SSSGNNTEPEDF 119
D N S+ ++ N N + N + N ++S NN +DF
Sbjct: 144 DDNNSSNNNNDDNNNDDNNSSNNNNDDNNNDDNNSSNNNNDDDF 187
Score = 44 (20.5 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 47 KGKQLEDEYMLFDYNVNLNDVIQLMIKADIDKNYQSSESSSKENIQPNGPACKPNINTEN 106
K ++ +E N ND ++ + + +KN + S NI N + +IN +N
Sbjct: 25 KNNEINNEVTYKIINEIKNDTVRNNMVKEGNKNINKKHNESNVNIVGN-KKYESDINMKN 83
Query: 107 AS 108
S
Sbjct: 84 KS 85
>UNIPROTKB|Q8IID0 [details] [associations]
symbol:PF11_0244 "Conserved Plasmodium protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AE014186 RefSeq:XP_001347915.1
ProteinModelPortal:Q8IID0 IntAct:Q8IID0 MINT:MINT-1640413
PRIDE:Q8IID0 EnsemblProtists:PF11_0244:mRNA GeneID:810791
KEGG:pfa:PF11_0244 EuPathDB:PlasmoDB:PF3D7_1123300
ProtClustDB:CLSZ2432487 Uniprot:Q8IID0
Length = 689
Score = 126 (49.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 28/91 (30%), Positives = 48/91 (52%)
Query: 647 YTLPS-SVLEHINNDTVHSNVWDEIKALCKEGQKEVLEHIQEKFLCIICQELVYKPITLD 705
YT + S+ + INN+ V + E C ++++ ++ C IC +L+ P+T+
Sbjct: 188 YTCTNTSIDKEINNNNVKNKKQKE----CINNEEKIPSEVE----CAICMKLLIVPVTIP 239
Query: 706 CVHTFCHDCLKRAFKIESDACNSCPYCRKEM 736
C H FC DC+++A + + N CP CR M
Sbjct: 240 CGHNFCRDCIEKAKEYK----NLCPLCRSNM 266
Score = 48 (22.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 77 DKNYQSSESSSKENIQPNGPACKPNINTENA-SSSGNNTEPEDF 119
D N S+ ++ N N + N + N ++S NN +DF
Sbjct: 144 DDNNSSNNNNDDNNNDDNNSSNNNNDDNNNDDNNSSNNNNDDDF 187
Score = 44 (20.5 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 47 KGKQLEDEYMLFDYNVNLNDVIQLMIKADIDKNYQSSESSSKENIQPNGPACKPNINTEN 106
K ++ +E N ND ++ + + +KN + S NI N + +IN +N
Sbjct: 25 KNNEINNEVTYKIINEIKNDTVRNNMVKEGNKNINKKHNESNVNIVGN-KKYESDINMKN 83
Query: 107 AS 108
S
Sbjct: 84 KS 85
>GENEDB_PFALCIPARUM|PF10_0114 [details] [associations]
symbol:PF10_0114 "DNA repair protein RAD23,
putative" species:5833 "Plasmodium falciparum" [GO:0003684 "damaged
DNA binding" evidence=ISS] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR004806 InterPro:IPR009060 InterPro:IPR015360
Pfam:PF00240 Pfam:PF00627 Pfam:PF09280 PRINTS:PR01839 SMART:SM00213
GO:GO:0005634 GO:GO:0043161 GO:GO:0003684 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955 PROSITE:PS50053
EMBL:AE014185 SUPFAM:SSF46934 GO:GO:0006289 KO:K10839 HSSP:P54725
Gene3D:1.10.10.540 SUPFAM:SSF101238 HOGENOM:HOG000172162
RefSeq:XP_001347399.1 ProteinModelPortal:Q8IJS8 IntAct:Q8IJS8
MINT:MINT-1571420 EnsemblProtists:PF10_0114:mRNA GeneID:810272
KEGG:pfa:PF10_0114 EuPathDB:PlasmoDB:PF3D7_1011700 OMA:NENEMES
ProtClustDB:CLSZ2515023 Uniprot:Q8IJS8
Length = 389
Score = 123 (48.4 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 36/120 (30%), Positives = 67/120 (55%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTL-DVPVDKQRLFYKGKQLEDEYMLFD 59
M +K+R+L ++ + V +++ D+K ++E L D+P DKQ+L + GK L+DE D
Sbjct: 1 MKIKVRTLQNNEEEINVDPDDSIL-DLKKKVEVVLADMPSDKQKLIFSGKILKDEDKATD 59
Query: 60 YNVNLNDVIQLMIKADIDKNYQSSESSSKENIQP--NGPACKPNINTENASSSGNNTEPE 117
+ + VI ++ + I+KN Q E +KE++ N N + +N + + +NTE +
Sbjct: 60 ILKDNDTVIVMVTRRIINKNNQK-EDINKESLSKIENNNNNNNNKSDDNINVTTSNTEEQ 118
Score = 44 (20.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 652 SVLEHINNDTVHSNVWD-EIKALCKEGQKEVLEHIQEKF 689
+V E+INN++ SN+ + E L +E L +E F
Sbjct: 197 NVNENINNESNFSNLLNSENNPLLEENSSHPLSSNEETF 235
>UNIPROTKB|Q8IJS8 [details] [associations]
symbol:PF10_0114 "DNA repair protein RAD23, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003684 "damaged DNA
binding" evidence=ISS] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR004806 InterPro:IPR009060 InterPro:IPR015360
Pfam:PF00240 Pfam:PF00627 Pfam:PF09280 PRINTS:PR01839 SMART:SM00213
GO:GO:0005634 GO:GO:0043161 GO:GO:0003684 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955 PROSITE:PS50053
EMBL:AE014185 SUPFAM:SSF46934 GO:GO:0006289 KO:K10839 HSSP:P54725
Gene3D:1.10.10.540 SUPFAM:SSF101238 HOGENOM:HOG000172162
RefSeq:XP_001347399.1 ProteinModelPortal:Q8IJS8 IntAct:Q8IJS8
MINT:MINT-1571420 EnsemblProtists:PF10_0114:mRNA GeneID:810272
KEGG:pfa:PF10_0114 EuPathDB:PlasmoDB:PF3D7_1011700 OMA:NENEMES
ProtClustDB:CLSZ2515023 Uniprot:Q8IJS8
Length = 389
Score = 123 (48.4 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 36/120 (30%), Positives = 67/120 (55%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTL-DVPVDKQRLFYKGKQLEDEYMLFD 59
M +K+R+L ++ + V +++ D+K ++E L D+P DKQ+L + GK L+DE D
Sbjct: 1 MKIKVRTLQNNEEEINVDPDDSIL-DLKKKVEVVLADMPSDKQKLIFSGKILKDEDKATD 59
Query: 60 YNVNLNDVIQLMIKADIDKNYQSSESSSKENIQP--NGPACKPNINTENASSSGNNTEPE 117
+ + VI ++ + I+KN Q E +KE++ N N + +N + + +NTE +
Sbjct: 60 ILKDNDTVIVMVTRRIINKNNQK-EDINKESLSKIENNNNNNNNKSDDNINVTTSNTEEQ 118
Score = 44 (20.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 652 SVLEHINNDTVHSNVWD-EIKALCKEGQKEVLEHIQEKF 689
+V E+INN++ SN+ + E L +E L +E F
Sbjct: 197 NVNENINNESNFSNLLNSENNPLLEENSSHPLSSNEETF 235
>UNIPROTKB|F1PMA7 [details] [associations]
symbol:PHF14 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00690000102091 OMA:SQELSME
EMBL:AAEX03009333 EMBL:AAEX03009334 Ensembl:ENSCAFT00000003573
Uniprot:F1PMA7
Length = 847
Score = 127 (49.8 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 31/115 (26%), Positives = 51/115 (44%)
Query: 284 EDEDHMSTEPKTLRQ---IVPECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHY 340
E+E H P+ RQ ++ + D+ T+ C+ C G + L+ C+EC+
Sbjct: 738 EEEKHEERIPRERRQRQSVLQKKPKAEDLRTE------CATCKGTGDNENLVRCDECRLC 791
Query: 341 YHIWCLKPPLESVPEDDE--WFCPSCKRDTSEVIAPGQKLKDSKKKARMASTNSK 393
YH CL PPL+ P+ W C C +S+ + K+ ++ M N K
Sbjct: 792 YHFGCLDPPLKKSPKQTGYGWICQECDSSSSKEDENEAERKNISQELSMEQKNPK 846
Score = 49 (22.3 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 73 KADIDKNYQSSESSSKENIQPNGPACKPNINTENASSSGNNTEPE 117
KA + N +S +S+ P G P++ T ++ +EP+
Sbjct: 36 KATVSDNVAASAASTTPATSPPGVNTSPSVPTTTTTAEEQVSEPK 80
Score = 44 (20.5 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 19/83 (22%), Positives = 34/83 (40%)
Query: 74 ADIDKNYQSSESSSKENIQPNGPACKPNINTENASSSGNNTEPEDFVDLKPADSQYYKVG 133
+D D+N + ++ G CK ++ S N+ + E+ + SQ
Sbjct: 145 SDEDENDEGNDEDHSSPASEGG--CKKK---KSKVLSRNSADDEELTNDSLTLSQSKSNE 199
Query: 134 DYVDAILETEGAWFESQITHILV 156
D + ILE W ++ HIL+
Sbjct: 200 DSL--ILEKSQNWSSQKMDHILI 220
>TAIR|locus:2138386 [details] [associations]
symbol:UBQ11 "AT4G05050" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=TAS] [GO:0006464
"cellular protein modification process" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0005634 GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161502 GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053
UniGene:At.48785 InterPro:IPR019954 EMBL:AF162444
InterPro:IPR019956 PRINTS:PR00348 KO:K08770 RefSeq:NP_567247.2
UniGene:At.24970 UniGene:At.25274 UniGene:At.47590 UniGene:At.74401
GeneID:828148 KEGG:ath:AT4G02890 EMBL:AY052661 EMBL:AY054281
EMBL:AY057530 EMBL:AY098958 IPI:IPI00528294 RefSeq:NP_001031585.1
RefSeq:NP_001118936.1 RefSeq:NP_567286.1 RefSeq:NP_849291.1
UniGene:At.74780 ProteinModelPortal:P0CH33 SMR:P0CH33 PRIDE:P0CH33
EnsemblPlants:AT4G02890.1 EnsemblPlants:AT4G02890.2
EnsemblPlants:AT4G05050.1 EnsemblPlants:AT4G05050.2
EnsemblPlants:AT4G05050.3 GeneID:825847 KEGG:ath:AT4G05050
TAIR:At4g05050 Uniprot:P0CH33
Length = 229
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 153 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 211
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 212 NIQKESTLHLVLR 224
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 77 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 135
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 136 NIQKESTLHLVLR 148
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G K L + I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTG-KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>ZFIN|ZDB-GENE-101021-4 [details] [associations]
symbol:lonrf1 "LON peptidase N-terminal domain and
ring finger 1" species:7955 "Danio rerio" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005
PROSITE:PS50089 PROSITE:PS50293 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-101021-4 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
GeneTree:ENSGT00440000033329 EMBL:FP016207 EMBL:FP085387
EMBL:FP101912 IPI:IPI00998181 Ensembl:ENSDART00000109935
Bgee:F1QKK1 Uniprot:F1QKK1
Length = 605
Score = 132 (51.5 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 29/91 (31%), Positives = 46/91 (50%)
Query: 671 KALCKEGQKEVLEHIQ-EKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSC 729
+ +C G++ L + F C +C L Y+P+T C HTFC +C++R+ D C
Sbjct: 294 RGVCSVGRESCLSVLTVSDFECPLCIRLFYEPVTTPCGHTFCKNCIERSL----DHNLRC 349
Query: 730 PYCRKEMNKSCLETHSNDA--LQSILSTLFP 758
P C++ + + N LQ I+S LFP
Sbjct: 350 PLCKQPLQEYFKNRKYNPTVLLQEIMSRLFP 380
Score = 40 (19.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 11/39 (28%), Positives = 14/39 (35%)
Query: 302 ECTTCN----DVETKHCKDCGCSICAGKTSPDKLIVCEE 336
EC C + T C C C G P + C+E
Sbjct: 3 ECPICLFLMCEPMTMSCGHSFCRRCMGAFLPSRCPTCKE 41
>MGI|MGI:1923931 [details] [associations]
symbol:Trim12a "tripartite motif-containing 12A"
species:10090 "Mus musculus" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 MGI:MGI:1923931
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00690000101646 HOVERGEN:HBG001357
HOGENOM:HOG000234134 EMBL:AF220126 EMBL:AK009769 IPI:IPI00469341
RefSeq:NP_076324.2 UniGene:Mm.458309 UniGene:Mm.486388
ProteinModelPortal:Q99PQ1 SMR:Q99PQ1 STRING:Q99PQ1 PRIDE:Q99PQ1
Ensembl:ENSMUST00000070943 Ensembl:ENSMUST00000106839 GeneID:76681
KEGG:mmu:76681 CTD:76681 eggNOG:NOG310455 NextBio:345615
Bgee:Q99PQ1 CleanEx:MM_TRIM12 Genevestigator:Q99PQ1
GermOnline:ENSMUSG00000066258 Uniprot:Q99PQ1
Length = 284
Score = 120 (47.3 bits), Expect = 0.00030, P = 0.00030
Identities = 25/73 (34%), Positives = 39/73 (53%)
Query: 680 EVLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNS----CPYCRKE 735
+ +++++E+ C +C L+ KP++ DC HTFC C+ F ES C+ CP CR
Sbjct: 4 QFMKNLKEEVTCPVCLNLMVKPVSADCGHTFCQGCITLYF--ESIKCDKKVFICPVCRIS 61
Query: 736 MNKSCLETHSNDA 748
S L + N A
Sbjct: 62 YQFSNLRPNRNVA 74
>UNIPROTKB|E1BQ22 [details] [associations]
symbol:TRIM68 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060765 "regulation of androgen receptor signaling
pathway" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=IEA]
[GO:0035035 "histone acetyltransferase binding" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0005794 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0060765 InterPro:IPR017907
GO:GO:0051865 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00700000104307
EMBL:DAAA02040960 IPI:IPI00715169 Ensembl:ENSBTAT00000015061
OMA:MQKLEQN Uniprot:E1BQ22
Length = 495
Score = 124 (48.7 bits), Expect = 0.00030, P = 0.00030
Identities = 20/56 (35%), Positives = 35/56 (62%)
Query: 681 VLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACN---SCPYCR 733
++E + E+ C IC + +P+++DC H+FCH CL +++ ++ N SCP CR
Sbjct: 6 LMEAVVEEVACPICMTFLKEPVSIDCGHSFCHSCLLGLWEVPGESQNWAYSCPLCR 61
>UNIPROTKB|F1NN75 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:AADN02006480
IPI:IPI00571489 Ensembl:ENSGALT00000021199 Uniprot:F1NN75
Length = 1696
Score = 138 (53.6 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 57/217 (26%), Positives = 98/217 (45%)
Query: 158 INKEKPYDEDDLIFKVVHLKYKDDGSSTMKFDDIRPLPKHLITEFNENLIGVRVMGNYNA 217
+ KEK + + + ++ +L K GS +K R L + + + +L+G++ N N
Sbjct: 137 VTKEKKWSK--VASRLGYLPGKGTGS-LLKSHYERILYPYELFQSGVSLMGIQ-KPNLNL 192
Query: 218 EEPRE-RGYWHDMIIEKKQGKRLTTELIATVFIGKKGLETRLENCKIKFVKELYKIE--- 273
+E E D KQG R+ L T + +++++E ++ EL K++
Sbjct: 193 KEKVEAEDLSSDAQTSPKQGSRMNVVLKRT-----RRVKSQVEAGEMSRNTELKKLQIFG 247
Query: 274 -SPKLLA-ERTAED-EDHMSTEPKTLRQIV--PECTTCNDVETKHCKDCG-CSICAGKTS 327
PK++ A+D ED ++ K R + + + D C C +
Sbjct: 248 AGPKMMGLSLGAKDKEDEVTRRRKGNRSEAFGMQMRQRKGTLSVNFVDLYVCLFCGRGNN 307
Query: 328 PDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSC 364
DKL++C+ C YH +CL PPL VP+ D W CP C
Sbjct: 308 EDKLLLCDGCDDSYHTFCLIPPLPDVPKGD-WRCPKC 343
Score = 44 (20.5 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 492 RTSVQSFDQTLTRMNKALARNCN 514
+ QS+D ++R+ +AL+ N N
Sbjct: 736 KVRAQSYDTWVSRVTEALSANLN 758
Score = 39 (18.8 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 510 ARNCNAPIDDKRGNEAVDW 528
A+NC P DK VDW
Sbjct: 1616 AQNCQRPCKDK-----VDW 1629
>RGD|1309052 [details] [associations]
symbol:Dpf3 "D4, zinc and double PHD fingers, family 3"
species:10116 "Rattus norvegicus" [GO:0005622 "intracellular"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0071565 "nBAF complex" evidence=ISO] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
RGD:1309052 GO:GO:0007399 GO:GO:0046872 GO:GO:0008270 GO:GO:0071565
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051 OrthoDB:EOG4T4CX1
IPI:IPI00958271 Ensembl:ENSRNOT00000010703 UCSC:RGD:1309052
ArrayExpress:D3ZMB5 Uniprot:D3ZMB5
Length = 369
Score = 122 (48.0 bits), Expect = 0.00031, P = 0.00031
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 314 CKDC-GCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSC 364
C +C C +C + D+L+ C++C YH++CL PP+ PE W C C
Sbjct: 304 CIECKSCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGS-WSCHLC 354
WARNING: HSPs involving 98 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.134 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 764 752 0.00090 121 3 11 22 0.43 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 348
No. of states in DFA: 628 (67 KB)
Total size of DFA: 437 KB (2208 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 75.47u 0.12s 75.59t Elapsed: 00:00:08
Total cpu time: 75.51u 0.12s 75.63t Elapsed: 00:00:08
Start: Thu Aug 15 16:21:14 2013 End: Thu Aug 15 16:21:22 2013
WARNINGS ISSUED: 2