RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11302
(764 letters)
>d2zkda1 b.122.1.12 (A:405-613) E3 ubiquitin-protein ligase UHRF1
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 209
Score = 304 bits (781), Expect = e-100
Identities = 145/210 (69%), Positives = 172/210 (81%), Gaps = 1/210 (0%)
Query: 401 GMACVGRTKVCTIVPSDHFGPIPGIEVGQSYLYRFQASEAGVHRPHVSGIHGREDVGAFS 460
GMACVGRT CTIVP++HFGPIPG+ VG + +R Q SE+GVHRPHV+GIHGR + GA+S
Sbjct: 1 GMACVGRTTECTIVPANHFGPIPGVPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYS 60
Query: 461 LVLSGGYEDDVDDGDSFLYTGSGGRDLSGNKRTSVQSFDQTLTRMNKALARNCNAPIDDK 520
LVL+GGYEDDVD+G+ F YTGSGGRDLSGNKRT+ QS DQ LT N+ALA NC++PI++K
Sbjct: 61 LVLAGGYEDDVDNGNYFTYTGSGGRDLSGNKRTAGQSSDQKLTNNNRALALNCHSPINEK 120
Query: 521 RGNEAVDWKKGKPVRVMRNFHGAKHSKYAPKEGNRYDGIYKVVKYYPVKGSSDFIVWRFH 580
G EA DW++GKPVRV+RN G KHSKYAP EGNRYDGIYKVVKY+P +G S F+VWR+
Sbjct: 121 -GAEAEDWRQGKPVRVVRNMKGGKHSKYAPAEGNRYDGIYKVVKYWPERGKSGFLVWRYL 179
Query: 581 LQRDDEAPAPWTEEGKKRIKDLGLQMIYPE 610
L+RDD P PWT EGK R + LGL M YPE
Sbjct: 180 LRRDDTEPEPWTREGKDRTRQLGLTMQYPE 209
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription
factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Length = 51
Score = 62.7 bits (152), Expect = 3e-13
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDT 368
C +C K DKLI+C+EC +H++CL+P L VP+ + W CP+C+ T
Sbjct: 3 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGE-WQCPACQPAT 51
>d1bt0a_ d.15.1.1 (A:) Rub1 {Mouse-ear cress (Arabidopsis
thaliana) [TaxId: 3702]}
Length = 73
Score = 60.7 bits (147), Expect = 2e-12
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M +K+++L G K + + I +K ++E +P +QRL Y GKQL D+ DY
Sbjct: 1 MLIKVKTLTG-KEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ V+ L++
Sbjct: 60 NIEGGSVLHLVLA 72
>d1wy8a1 d.15.1.1 (A:8-83) Ubiquitin-like PHD and RING finger
domain-containing protein 2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 76
Score = 60.7 bits (147), Expect = 2e-12
Identities = 34/76 (44%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
Query: 1 MYVKIRSLDGSKNCVLV-LSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFD 59
M++++R++DGSK C + +S++ I +++ ++ DV + QRLFY+GKQLE+ Y LFD
Sbjct: 1 MWIQVRTIDGSKTCTIEDVSRKATIEELRERVWALFDVRPECQRLFYRGKQLENGYTLFD 60
Query: 60 YNVNLNDVIQLMIKAD 75
Y+V LND+IQL+++ D
Sbjct: 61 YDVGLNDIIQLLVRPD 76
>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 60.9 bits (147), Expect = 5e-12
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 669 EIKALCKEGQKEVLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNS 728
++ AL E + V+ +Q+ C IC EL+ +P++ C H FC C+ + + +
Sbjct: 2 DLSALRVEEVQNVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLN-QKKGPSQ 60
Query: 729 CPYCRKEMNKSCLETHSNDALQSILSTL 756
CP C+ ++ K L + ++ L
Sbjct: 61 CPLCKNDITKRSL--QESTRFSQLVEEL 86
>d1ogwa_ d.15.1.1 (A:) Ubiquitin {Human (Homo sapiens) [TaxId:
9606]}
Length = 76
Score = 58.8 bits (142), Expect = 1e-11
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M + +++L G + V T I ++K +I++ +P D+QRL + GKQLED L DY
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDT-IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 61 NVNLNDVIQLMIK 73
N+ + L+++
Sbjct: 60 NIQKESTLHLVLR 72
>d1oqya4 d.15.1.1 (A:1-77) Ubiquitin-like domain of Rad23 homolog
A (Hhr23a) {Human (Homo sapiens) [TaxId: 9606]}
Length = 77
Score = 59.1 bits (143), Expect = 1e-11
Identities = 16/75 (21%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIEN---TLDVPVDKQRLFYKGKQLEDEYML 57
+ + +++L + + + + +K +IE PV Q+L Y GK L D+ +
Sbjct: 3 VTITLKTLQQ-QTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPI 61
Query: 58 FDYNVNLNDVIQLMI 72
DY ++ + + +M+
Sbjct: 62 RDYRIDEKNFVVVMV 76
>d2faza1 d.15.1.1 (A:1-76) Ubiquitin-like PHD and RING finger
domain-containing protein 1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 76
Score = 58.8 bits (142), Expect = 1e-11
Identities = 31/74 (41%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query: 1 MYVKIRSLDGSKN-CVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFD 59
M++++R++DG + V LS+ T + +++ +I+ V QRLFY+GKQ+ED + LFD
Sbjct: 1 MWIQVRTMDGRQTHTVDSLSRLTKVEELRRKIQELFHVEPGLQRLFYRGKQMEDGHTLFD 60
Query: 60 YNVNLNDVIQLMIK 73
Y V LND IQL+++
Sbjct: 61 YEVRLNDTIQLLVR 74
>d1wx9a1 d.15.1.1 (A:8-80) Large proline-rich protein BAT3 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 73
Score = 57.9 bits (140), Expect = 2e-11
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
+ V +++LD + ++ + + + K I ++ +P +KQRL Y+G+ L+D+ L +Y
Sbjct: 1 LEVLVKTLDS-QTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEY 59
Query: 61 NVNLNDVIQLMIKA 74
NV VI L+ +A
Sbjct: 60 NVG-GKVIHLVERA 72
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 70
Score = 57.7 bits (139), Expect = 2e-11
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 316 DCGCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTSE 370
D +IC P L++C +C+ +H+ C P L+ VP ++ W C C
Sbjct: 4 DDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEE-WSCSLCHVLPDL 57
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 64
Score = 57.3 bits (138), Expect = 2e-11
Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 319 CSICAGKTSPDKLIV-CEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTS 369
C C + D+ + C+ C+ ++H C+K ++ CPSC +
Sbjct: 9 CGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKSG 60
>d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1
(RAG1), dimerization domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 86
Score = 58.0 bits (140), Expect = 3e-11
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 680 EVLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKS 739
+ H + C IC+ ++ P+ C H FC C+ R K+ + CP CR +
Sbjct: 15 DFPAHFVKSISCQICEHILADPVETSCKHLFCRICILRCLKVMG---SYCPSCRYPCFPT 71
Query: 740 CLETHSNDALQSILST 755
LE+ + +IL++
Sbjct: 72 DLES-PVKSFLNILNS 86
>d1zkha1 d.15.1.1 (A:1-86) Splicing factor 3 subunit 1, C-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 86
Score = 57.2 bits (138), Expect = 6e-11
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 8 LDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDYNVNLNDV 67
L+G + V L +S +K +I +P KQ+L Y+G ++D L YN+ V
Sbjct: 19 LNG-QVLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAV 77
Query: 68 IQLMIK 73
I L +K
Sbjct: 78 IHLALK 83
>d1z2ma2 d.15.1.1 (A:79-154) Interferon-induced 15 kDa protein
{Human (Homo sapiens) [TaxId: 9606]}
Length = 76
Score = 56.0 bits (135), Expect = 1e-10
Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
+ + +R+ G + V +T ++ +K Q+ V D L ++GK LED+ L +Y
Sbjct: 4 LSILVRNNKGRSSTYEVRLTQT-VAHLKQQVSGLEGVQDDLFWLTFEGKPLEDQLPLGEY 62
Query: 61 NVNLNDVIQLMIK 73
+ + + ++
Sbjct: 63 GLKPLSTVFMNLR 75
>d1uela_ d.15.1.1 (A:) Ubiquitin-like domain of Rad23 homolog B
(Hhr23B) {Human (Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 56.6 bits (136), Expect = 1e-10
Identities = 21/93 (22%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIE---NTLDVPVDKQRLFYKGKQLEDEYML 57
M V +++L + + + T + +K +IE PV Q+L Y GK L D+ L
Sbjct: 1 MQVTLKTLQQQTFKIDIDPEET-VKALKEKIESEKGKDAFPVAGQKLIYAGKILNDDTAL 59
Query: 58 FDYNVNLNDVIQLMIKADIDKNYQSSESSSKEN 90
+Y ++ + + +M+ K + ++ E+
Sbjct: 60 KEYKIDEKNFVVVMVTK--PKAVSTPAPATLEH 90
>d1wgda_ d.15.1.1 (A:) Homocysteine-responsive endoplasmic
reticulum-resident ubiquitin-like domain member 1
protein, HERPUD1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 56.4 bits (136), Expect = 1e-10
Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 5/78 (6%)
Query: 1 MYVKIRSLDGSKNCVLV-LSKRTLISDMKTQIENTL--DVPVDKQRLFYKGKQLEDEYML 57
+ + ++S + + + + + +K + + QRL Y GK L D L
Sbjct: 8 VTLLVKSPNQRHRDLELSGDRGWSVGHLKAHLSRVYPERPRPEDQRLIYSGKLLLDHQCL 67
Query: 58 FDYNVNLND--VIQLMIK 73
D V+ L+
Sbjct: 68 RDLLPKQEKRHVLHLVCN 85
>d1v2ya_ d.15.1.1 (A:) Ubiquitin-like protein 3300001g02rik {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 105
Score = 56.2 bits (135), Expect = 2e-10
Identities = 16/89 (17%), Positives = 37/89 (41%), Gaps = 17/89 (19%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQR---------------LF 45
M V++ +DG +V+ + + D+K I+ + + +++ L
Sbjct: 8 MTVRVCKMDGEV-MPVVVVQNATVLDLKKAIQRYVQLKQEREGGVQHISWSYVWRTYHLT 66
Query: 46 YKGKQLEDEYM-LFDYNVNLNDVIQLMIK 73
G++L ++ L DY + D + + K
Sbjct: 67 SAGEKLTEDRKKLRDYGIRNRDEVSFIKK 95
>d2zeqa1 d.15.1.1 (A:1-78) Ubiquitin-like domain of parkin {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 78
Score = 55.3 bits (133), Expect = 2e-10
Identities = 15/73 (20%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
M V +R V V S + I +K + VP D+ R+ + GK+L + + +
Sbjct: 3 MIVFVRFNSSYGFPVEVDSDTS-ILQLKEVVAKRQGVPADQLRVIFAGKELPNHLTVQNC 61
Query: 61 NVNLNDVIQLMIK 73
++ ++ ++ +
Sbjct: 62 DLEQQSIVHIVQR 74
>d1wh3a_ d.15.1.1 (A:) 2'-5'-oligoadenylate synthetase-like
protein, OASL {Human (Homo sapiens) [TaxId: 9606]}
Length = 87
Score = 54.6 bits (131), Expect = 4e-10
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
+ V +++ DG + ++ + I +K QIE+ +P +Q+L ++G+ L+D L Y
Sbjct: 8 IQVFVKNPDG-GSYAYAINPNSFILGLKQQIEDQQGLPKKQQQLEFQGQVLQDWLGLGIY 66
Query: 61 NVNLNDVIQLMIK 73
+ +D + L K
Sbjct: 67 GIQDSDTLILSKK 79
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId:
9606]}
Length = 79
Score = 54.2 bits (130), Expect = 4e-10
Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Query: 668 DEIKALCKEGQKEVLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACN 727
D IK +E + E LC IC E C H C CL + E
Sbjct: 4 DHIKVT-QEQYELYCEMGSTFQLCKICAENDKDVKIEPCGHLMCTSCLTSWQESEG---Q 59
Query: 728 SCPYCRKEMNKS 739
CP+CR E+ +
Sbjct: 60 GCPFCRCEIKGT 71
Score = 30.4 bits (68), Expect = 0.13
Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 7/49 (14%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRD 367
C IC DK + E C H CL ES + CP C+ +
Sbjct: 26 CKIC---AENDKDVKIEPCGHLMCTSCLTSWQES----EGQGCPFCRCE 67
>d1wgha_ d.15.1.1 (A:) Ubiquitin-like protein 3, Ubl3 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 116
Score = 54.2 bits (130), Expect = 1e-09
Identities = 14/100 (14%), Positives = 34/100 (34%), Gaps = 11/100 (11%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTL--------DVPVDKQRLFYKGKQLE 52
+ +++ + G K + S SD+ + + + RL Y+G+ L
Sbjct: 17 INLRLILVSG-KTKEFLFSPNDSASDIAKHVYDNWPMDWEEEQVSSPNILRLIYQGRFLH 75
Query: 53 DEYMLFDYNVNLND--VIQLMIKADIDKNYQSSESSSKEN 90
L + V+ L+ + + + + S +
Sbjct: 76 GNVTLGALKLPFGKTTVMHLVARETLPEPNSQGQRSGPSS 115
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 88
Score = 52.5 bits (125), Expect = 3e-09
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 5/64 (7%)
Query: 319 CSICAGKTSPDK--LIVCEECQHYYHIWCLKPPLESVPE---DDEWFCPSCKRDTSEVIA 373
C +C T L+ C+EC + YH C KP + W+C C R +
Sbjct: 19 CVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMKRMAQ 78
Query: 374 PGQK 377
QK
Sbjct: 79 KNQK 82
>d1x1ma1 d.15.1.1 (A:8-101) Ubiquitin-like protein 7 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 94
Score = 52.6 bits (126), Expect = 3e-09
Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 24 ISDMKTQIENTLDVPV---DKQRLFYKGKQLEDEYMLFDYNVNLNDVIQLMIKA 74
IS +K I L V + L Y G++L+D+ L Y + + ++ K+
Sbjct: 40 ISFLKQLIAGKLQESVPDPELIDLIYCGRKLKDDQTLDFYGIQPGSTVHVLRKS 93
>d1wiaa_ d.15.1.1 (A:) Ubiquitin-like protein bab25500
(2010008E23Rik) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 95
Score = 52.2 bits (125), Expect = 4e-09
Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 5/74 (6%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQL-EDEYMLFD 59
+ V+++ L+ + V + +K++ + +L Y+G+ L + L
Sbjct: 8 INVRLKFLND-TEELAVARPEDTVGTLKSKYF---PGQESQMKLIYQGRLLQDPARTLSS 63
Query: 60 YNVNLNDVIQLMIK 73
N+ N VI
Sbjct: 64 LNITNNCVIHCHRS 77
>d2bwfa1 d.15.1.1 (A:2-74) DSK2 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 73
Score = 51.3 bits (123), Expect = 5e-09
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
+ + I+S G + ++ + + K I +PV QRL Y GK L+D+ + Y
Sbjct: 2 LNIHIKS--GQDKWEVNVAPESTVLQFKEAINKANGIPVANQRLIYSGKILKDDQTVESY 59
Query: 61 NVNLNDVIQLM 71
++ + L+
Sbjct: 60 HIQDGHSVHLV 70
>d1z2ma1 d.15.1.1 (A:3-78) Interferon-induced 15 kDa protein
{Human (Homo sapiens) [TaxId: 9606]}
Length = 76
Score = 50.7 bits (121), Expect = 7e-09
Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Query: 3 VKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFY--KGKQLEDEYMLFDY 60
+ ++ L G + LS +S++K QI + V +QRL G L+D L
Sbjct: 3 LTVKMLAG-NEFQVSLSSSMSVSELKAQITQKIGVHAFQQRLAVHPSGVALQDRVPLASQ 61
Query: 61 NVNLNDVIQLMIK 73
+ + L++
Sbjct: 62 GLGPGSTVLLVVD 74
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 79
Score = 50.8 bits (121), Expect = 8e-09
Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 319 CSICAGKTSPDKL-IVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKR 366
+C + + I C CQ ++H C+ E+ + D + CP C+
Sbjct: 14 YCLCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEA 62
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia
proto-oncoprotein PML {Human (Homo sapiens) [TaxId:
9606]}
Length = 56
Score = 49.9 bits (119), Expect = 1e-08
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 8/51 (15%)
Query: 686 QEKFL-CIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKE 735
+ +FL C CQ P L C+HT C CL+ + CP C+
Sbjct: 3 EFQFLRCQQCQAEAKCPKLLPCLHTLCSGCLEA-------SGMQCPICQAP 46
Score = 27.9 bits (62), Expect = 0.52
Identities = 11/51 (21%), Positives = 13/51 (25%), Gaps = 11/51 (21%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTS 369
C C + K C H CL E CP C+
Sbjct: 9 CQQC---QAEAKCPKLLPCLHTLCSGCL--------EASGMQCPICQAPWP 48
>d1wx8a1 d.15.1.1 (A:8-90) 4931431F19Rik {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 83
Score = 50.4 bits (120), Expect = 1e-08
Identities = 13/74 (17%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
+ V +++ L++ + + K QI L D+ L + GK L D+ +L
Sbjct: 11 IRVSVKTPQDCHE--FFLAENSNVRRFKKQISKYLHCNADRLVLIFTGKILRDQDILSQR 68
Query: 61 NVNLNDVIQLMIKA 74
+ + +++++
Sbjct: 69 GILDGSTVHVVVRS 82
>d2c9wb1 d.15.1.1 (B:2-104) Elongin B {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 50.6 bits (121), Expect = 2e-08
Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
+++ IR + + + ++K +E L P D+QRL+ + L+D L +
Sbjct: 2 VFLMIRR--HKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGEC 59
Query: 61 NVNLNDV 67
Sbjct: 60 GFTSQTA 66
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 72
Score = 49.7 bits (118), Expect = 2e-08
Identities = 9/51 (17%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Query: 316 DCGCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKR 366
DC C ++++ C+ C ++H C+ + C C
Sbjct: 18 DCKCGTKDDDG--ERMLACDGCGVWHHTRCIGINNADALPSK-FLCFRCIE 65
>d1se9a_ d.15.1.1 (A:) Hypothetical protein At3g01050 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 101
Score = 50.3 bits (120), Expect = 2e-08
Identities = 16/79 (20%), Positives = 31/79 (39%), Gaps = 7/79 (8%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVP-------VDKQRLFYKGKQLED 53
+ +K R DGS T +S +K + + V + +L GK LE+
Sbjct: 8 LEIKFRLTDGSDIGPKAFPDATTVSALKETVISEWPREKENGPKTVKEVKLISAGKVLEN 67
Query: 54 EYMLFDYNVNLNDVIQLMI 72
+ DY ++++ +
Sbjct: 68 SKTVKDYRSPVSNLAGAVT 86
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId:
9606]}
Length = 61
Score = 48.8 bits (116), Expect = 3e-08
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCK 365
C +C +L+ C+ C YHI CL PPL +P + W CP C
Sbjct: 12 CRVCK---DGGELLCCDTCPSSYHIHCLNPPLPEIPNGE-WLCPRCT 54
>d1ttna1 d.15.1.1 (A:21-100) Dendritic cell-derived ubiquitin-like
protein {Human (Homo sapiens) [TaxId: 9606]}
Length = 80
Score = 49.2 bits (117), Expect = 3e-08
Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
+++R G K+ LV+ + MK ++ V QR F+ G+ L D+ +
Sbjct: 4 CQLRLRLSTG-KDLKLVVRSTDTVFHMKRRLHAAEGVEPGSQRWFFSGRPLTDKMKFEEL 62
Query: 61 NVNLNDVIQLMIK 73
+ + V+Q+++
Sbjct: 63 KIPKDYVVQVIVS 75
>d1euvb_ d.15.1.1 (B:) SUMO-1 (smt3 homologue) {Baker's yeast
(Saccharomyces cerevisiae), smt3 [TaxId: 4932]}
Length = 79
Score = 48.3 bits (115), Expect = 5e-08
Identities = 13/71 (18%), Positives = 29/71 (40%)
Query: 2 YVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDYN 61
++ ++ DGS + K T + + +D R Y G +++ + D +
Sbjct: 4 HINLKVSDGSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDSLRFLYDGIRIQADQTPEDLD 63
Query: 62 VNLNDVIQLMI 72
+ ND+I+
Sbjct: 64 MEDNDIIEAHR 74
>d1v5ta_ d.15.1.1 (A:) 8430435i17rik protein {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 90
Score = 48.8 bits (116), Expect = 6e-08
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFY---KGKQLEDEYML 57
+ + ++ G + V LS+ + D+K ++ V ++Q+L KGK E++ L
Sbjct: 8 LPIIVKWG-GQEYSVTTLSEDDTVLDLKQFLKTLTGVLPERQKLLGLKVKGKPAENDVKL 66
Query: 58 FDYNVNLNDVIQLMIKAD 75
+ N I +M +
Sbjct: 67 GALKLKPNTKIMMMGTRE 84
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine
herpesvirus 1 [TaxId: 10326]}
Length = 68
Score = 45.7 bits (108), Expect = 4e-07
Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 5/61 (8%)
Query: 691 CIICQELVYKP-ITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKSCLETHSNDAL 749
C IC E + L C+H FC+ C+ R + +CP C+ + S+
Sbjct: 8 CPICLEDPSNYSMALPCLHAFCYVCITRWIRQN----PTCPLCKVPVESVVHTIESDSEF 63
Query: 750 Q 750
Sbjct: 64 G 64
Score = 34.5 bits (79), Expect = 0.004
Identities = 13/54 (24%), Positives = 18/54 (33%), Gaps = 7/54 (12%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRDTSEVI 372
C IC P + C H + C+ + P CP CK V+
Sbjct: 8 CPIC--LEDPSNYSMALPCLHAFCYVCITRWIRQNPT-----CPLCKVPVESVV 54
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1,
Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 76
Score = 45.5 bits (107), Expect = 5e-07
Identities = 10/62 (16%), Positives = 24/62 (38%), Gaps = 4/62 (6%)
Query: 313 HCKDCGCSICAGKTSPDKLIVCEECQHYYHIWCL----KPPLESVPEDDEWFCPSCKRDT 368
+ + IC + +I C+ C+ ++H C+ +++ CP+C +
Sbjct: 12 YDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILS 71
Query: 369 SE 370
Sbjct: 72 GP 73
>d1wxva1 d.15.1.1 (A:7-87) Bag-family molecular chaperone
regulator-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 81
Score = 45.2 bits (107), Expect = 8e-07
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 24 ISDMKTQIENTLDVPVDKQRLFYKGKQL-EDEYMLFDYNVNLNDVIQLMIK 73
+ D+ +E + VP Q+L +KGK L E E L + + L+ K
Sbjct: 28 VQDLAQVVEEVIGVPQSFQKLIFKGKSLKEMETPLSALGIQDGCRVMLIGK 78
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 78
Score = 44.3 bits (104), Expect = 2e-06
Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Query: 685 IQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKSCLETH 744
E F C I EL+ P+ + T+ +++ +CP ++ + + L
Sbjct: 5 FPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAG---HKTCPKSQETLLHAGL--T 59
Query: 745 SNDALQSI 752
N L+S+
Sbjct: 60 PNYVLKSL 67
>d1wjua_ d.15.1.1 (A:) NEDD8 ultimate buster-1, NUB1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 100
Score = 45.0 bits (106), Expect = 2e-06
Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
+++ R KN + +++++I T + + ++ KQL+ L +
Sbjct: 20 VFLPPRLKKDRKNLLET-RLHITGRELRSKIAETFGLQENYIKIVINKKQLQLGKTLEEQ 78
Query: 61 NVNLNDVIQLM 71
V N ++
Sbjct: 79 GVAHNVKAMVL 89
>d2uyzb1 d.15.1.1 (B:20-96) SUMO-1 (smt3 homologue) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 77
Score = 44.0 bits (104), Expect = 2e-06
Identities = 14/72 (19%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
+ +K+ D S+ V T + +K VP++ R ++G+++ D + +
Sbjct: 3 IKLKVIGQDSSEIHFKV-KMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKEL 61
Query: 61 NVNLNDVIQLMI 72
+ DVI++
Sbjct: 62 GMEEEDVIEVYQ 73
>d1v5oa_ d.15.1.1 (A:) 1700011n24rik protein {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 102
Score = 44.6 bits (105), Expect = 2e-06
Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 2 YVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQ-LEDEYMLFDY 60
Y R L L ++ +S+ + E VP ++ ++ Y + +D L Y
Sbjct: 13 YCVRRDLTE-VTFSLQVNPDFELSNFRVLCELESGVPAEEAQIVYMEQLLTDDHCSLGSY 71
Query: 61 NVNLNDVIQLMIK 73
+ D++ L+ K
Sbjct: 72 GLKDGDMVVLLQK 84
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 97
Score = 44.0 bits (103), Expect = 3e-06
Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 9/79 (11%)
Query: 679 KEVLEHIQEKFLCIICQELVYKPITL-DCVHTFCHDCLKRAFKIESDACNSCPYCRKEMN 737
+ L+ +++ C C ++ +P+ L C H FC +C+ CP C
Sbjct: 13 RAALDRLEKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIG------TGCPVCYTPAW 66
Query: 738 KSCLETHSNDALQSILSTL 756
L N L S++
Sbjct: 67 IQDL--KINRQLDSMIQLC 83
>d1wjna_ d.15.1.1 (A:) Tubulin-folding protein TbcE {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 97
Score = 43.8 bits (103), Expect = 4e-06
Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 8/80 (10%)
Query: 3 VKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLE--------DE 54
+K + + L + +K + L VPV + L Y+ ++ D
Sbjct: 14 IKCSNQPERQILEKQLPDSMTVQKVKGLLSRLLKVPVSELLLSYESSKMPGREIELENDL 73
Query: 55 YMLFDYNVNLNDVIQLMIKA 74
L Y+V D + +
Sbjct: 74 QPLQFYSVENGDCLLVRWSG 93
>d1yqba1 d.15.1.1 (A:15-98) Ubiquilin-3 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 84
Score = 42.7 bits (100), Expect = 8e-06
Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
+ V +++ ++ ++ I +K +I D+ L + GK L+D L
Sbjct: 8 IKVTVKTPKDKED--FSVTDTCTIQQLKEEISQRFKAHPDQLVLIFAGKILKDPDSLAQC 65
Query: 61 NVNLNDVIQLMIKA 74
V + L+IK
Sbjct: 66 GVRDGLTVHLVIKR 79
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens)
[TaxId: 9606]}
Length = 65
Score = 41.7 bits (97), Expect = 9e-06
Identities = 14/66 (21%), Positives = 23/66 (34%), Gaps = 8/66 (12%)
Query: 687 EKFLCIICQELVYKP-----ITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKSCL 741
+ C C+ Y+ + C HT C C+ F + +CP C + KS
Sbjct: 2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGA---GNCPECGTPLRKSNF 58
Query: 742 ETHSND 747
+
Sbjct: 59 RVQLFE 64
Score = 29.7 bits (66), Expect = 0.19
Identities = 9/50 (18%), Positives = 13/50 (26%), Gaps = 6/50 (12%)
Query: 319 CSICAG--KTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKR 366
C C +P ++ C H C+ CP C
Sbjct: 6 CPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGA----GNCPECGT 51
>d1uh6a_ d.15.1.1 (A:) Ubiquitin-like protein 5, ubl5 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 100
Score = 42.7 bits (100), Expect = 1e-05
Identities = 16/71 (22%), Positives = 25/71 (35%), Gaps = 1/71 (1%)
Query: 3 VKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDYNV 62
V G K V + T I D+K I +K L +D L DY +
Sbjct: 31 VVCNDRLGKKVRVKCNTDDT-IGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDYEI 89
Query: 63 NLNDVIQLMIK 73
+ ++L +
Sbjct: 90 HDGMNLELYYQ 100
>d1m94a_ d.15.1.1 (A:) Ubiquitin-like modifier protein hub1
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 73
Score = 41.6 bits (97), Expect = 1e-05
Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
+ V + G K V L++ + + D K + + +K L G L+D L DY
Sbjct: 2 IEVVVNDRLGKKVRVKCLAEDS-VGDFKKVLSLQIGTQPNKIVLQKGGSVLKDHISLEDY 60
Query: 61 NVNLNDVIQL 70
V+ ++L
Sbjct: 61 EVHDQTNLEL 70
>d1t0ya_ d.15.1.1 (A:) Ubiquitin-like domain of tubulin folding
cofactor B {Nematode (Caenorhabditis elegans) [TaxId:
6239]}
Length = 90
Score = 41.0 bits (96), Expect = 3e-05
Identities = 10/64 (15%), Positives = 19/64 (29%), Gaps = 7/64 (10%)
Query: 18 LSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQ-------LEDEYMLFDYNVNLNDVIQL 70
++D+K ++E + VD R+ + L D V I
Sbjct: 22 YPAGMSLNDLKKKLELVVGTTVDSMRIQLFDGDDQLKGELTDGAKSLKDLGVRDGYRIHA 81
Query: 71 MIKA 74
+
Sbjct: 82 VDVT 85
>d1j8ca_ d.15.1.1 (A:) Ubiquitin-like N-terminal domain of PLIC-2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 40.7 bits (95), Expect = 5e-05
Identities = 13/73 (17%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDY 60
+ V +++ + + + + + K I D+ L + GK L+D+ L +
Sbjct: 33 IKVTVKTPKEKEE--FAVPENSSVQQFKEAISKRFKSQTDQLVLIFAGKILKDQDTLIQH 90
Query: 61 NVNLNDVIQLMIK 73
++ + L+IK
Sbjct: 91 GIHDGLTVHLVIK 103
>d1v86a_ d.15.1.1 (A:) hypothetical D7wsu128e protein {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 95
Score = 39.9 bits (93), Expect = 8e-05
Identities = 12/72 (16%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Query: 3 VKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDYNV 62
V ++ + + + + S++K +I + +P Q++ YKG ++ L + V
Sbjct: 18 VDLKIIWNKTKHDVKVPLDSTGSELKQKIHSITGLPPAMQKVMYKGLV-PEDKTLREIKV 76
Query: 63 NLNDVIQLMIKA 74
I ++
Sbjct: 77 TSGAKIMVVGST 88
>d1v6ea_ d.15.1.1 (A:) Ubiquitin-like domain of tubulin folding
cofactor B {Mouse (Mus musculus) [TaxId: 10090]}
Length = 95
Score = 39.9 bits (93), Expect = 8e-05
Identities = 15/81 (18%), Positives = 30/81 (37%), Gaps = 7/81 (8%)
Query: 1 MYVKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQ-------LED 53
+ V I S S S+ I++ K ++E + P L G ++
Sbjct: 8 VMVFISSSLNSFRSEKRYSRSLTIAEFKCKLELVVGSPASCMELELYGADDKFYSKLDQE 67
Query: 54 EYMLFDYNVNLNDVIQLMIKA 74
+ +L Y V+ I ++ +
Sbjct: 68 DALLGSYPVDDGCRIHVIDHS 88
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa)
[TaxId: 4530]}
Length = 55
Score = 38.7 bits (90), Expect = 9e-05
Identities = 10/55 (18%), Positives = 18/55 (32%), Gaps = 8/55 (14%)
Query: 685 IQEKFLCIICQELVYKP----ITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKE 735
+ + C +C + C H F +C+ ++CP CR
Sbjct: 2 MDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSH----STCPLCRLT 52
Score = 37.2 bits (86), Expect = 3e-04
Identities = 11/50 (22%), Positives = 19/50 (38%), Gaps = 6/50 (12%)
Query: 319 CSICAGK-TSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCKRD 367
C++C + ++ C H +H C+ L S CP C+
Sbjct: 8 CAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHST-----CPLCRLT 52
>d1we6a_ d.15.1.1 (A:) Splicing factor 3 subunit 1, C-terminal
domain {Thale cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 111
Score = 40.4 bits (94), Expect = 9e-05
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 1 MYVKIRSLDGSKNCVL-VLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFD 59
+ V + + + + V S + +K +I + +P +KQ+L K L+D L
Sbjct: 30 IRVSKPNENDGQFMEITVQSLSENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAH 89
Query: 60 YNVNLNDVIQLMIK 73
YNV +++ L ++
Sbjct: 90 YNVGAGEILTLSLR 103
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain
{Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8
[TaxId: 37296]}
Length = 60
Score = 37.9 bits (87), Expect = 2e-04
Identities = 9/58 (15%), Positives = 14/58 (24%), Gaps = 7/58 (12%)
Query: 686 QEKFLCIICQE-----LVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNK 738
++ +C IC E + CL +C C N
Sbjct: 4 EDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLT--ISRNTACQICGVVYNT 59
Score = 28.7 bits (63), Expect = 0.42
Identities = 10/49 (20%), Positives = 11/49 (22%), Gaps = 5/49 (10%)
Query: 319 CSIC--AGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFCPSCK 365
C IC + C H CL L C C
Sbjct: 9 CWICNEELGNERFRACGCTGELENVHRSCLSTWLTI---SRNTACQICG 54
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 78
Score = 38.2 bits (88), Expect = 2e-04
Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Query: 321 ICAGKTSPDKLIVCE--ECQHYYHIWCL----KPPLESVPEDDEWFCPSCKRD 367
+C D +I CE C + H+ C+ KP + P + ++C C+
Sbjct: 20 VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLT 72
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing
protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 80
Score = 37.9 bits (87), Expect = 3e-04
Identities = 6/53 (11%), Positives = 14/53 (26%)
Query: 685 IQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMN 737
I + I EL+ +P T+ ++ + +
Sbjct: 4 IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQ 56
>d3dplr1 g.44.1.1 (R:19-106) RIGG-box protein 1 (RBX1) of SCF
ubiquitin ligase complex {Human (Homo sapiens) [TaxId:
9606]}
Length = 88
Score = 38.2 bits (88), Expect = 3e-04
Identities = 12/68 (17%), Positives = 19/68 (27%), Gaps = 6/68 (8%)
Query: 668 DEIKALCKEGQKEVLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACN 727
+ A+C+ ++ Q C H F C+ R K
Sbjct: 21 VDNCAICRNHIMDLCIECQANQAS--ATSEECTVAWGVCNHAFHFHCISRWLKTR----Q 74
Query: 728 SCPYCRKE 735
CP +E
Sbjct: 75 VCPLDNRE 82
Score = 34.7 bits (79), Expect = 0.006
Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 6/66 (9%)
Query: 302 ECTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWFC 361
C C + C +C + + + + C H +H C+ L++ C
Sbjct: 23 NCAICRNHIMDLCIECQANQASATSEECT-VAWGVCNHAFHFHCISRWLKTRQV-----C 76
Query: 362 PSCKRD 367
P R+
Sbjct: 77 PLDNRE 82
>d1wf9a1 d.15.1.1 (A:8-101) NPL4-like protein 1 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 94
Score = 37.5 bits (87), Expect = 6e-04
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 3 VKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRL 44
+++RS DG + + T+ S +KT I++ L +P+ Q L
Sbjct: 3 LRVRSRDGLERVSVDGPHITV-SQLKTLIQDQLQIPIHNQTL 43
>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 52
Score = 35.1 bits (80), Expect = 0.002
Identities = 13/52 (25%), Positives = 18/52 (34%), Gaps = 7/52 (13%)
Query: 691 CIICQELVYK----PITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNK 738
C +C E + C + C C R E+ CP CRK +
Sbjct: 3 CPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDEN---GLCPACRKPYPE 51
>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 71
Score = 35.3 bits (81), Expect = 0.002
Identities = 9/52 (17%), Positives = 20/52 (38%), Gaps = 5/52 (9%)
Query: 319 CSICAGKTSPDKLIVCEE--CQHYYHIWCLKPPLESVPEDDEWFCPSCKRDT 368
+C + + + E ++H C+ +W+CP C+ D+
Sbjct: 18 YCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLT---YKPKGKWYCPKCRGDS 66
>d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4
{Homo sapiens [TaxId: 9606]}
Length = 51
Score = 34.1 bits (78), Expect = 0.004
Identities = 10/60 (16%), Positives = 21/60 (35%), Gaps = 11/60 (18%)
Query: 310 ETKHCKDCGCSICAGKTSPDKLIVCEE--CQHYYHIWCLKPPLESVPEDDEWFCPSCKRD 367
E +C +C + + + ++H C+ +WFCP C ++
Sbjct: 1 EPTYC------LCHQVSYGEMIGCDNPDCSIEWFHFACVGLT---TKPRGKWFCPRCSQE 51
>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 114
Score = 35.4 bits (80), Expect = 0.004
Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 2/85 (2%)
Query: 282 TAEDEDHMSTEPKTLRQIVPE-CTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHY 340
+ E E + + L+ E C C + + + + C H
Sbjct: 6 SGEPEQVIRKYTEELKVAPEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTK-CSHA 64
Query: 341 YHIWCLKPPLESVPEDDEWFCPSCK 365
+H+ CL + +D CPSCK
Sbjct: 65 FHLLCLLAMYCNGNKDGSLQCPSCK 89
Score = 34.6 bits (78), Expect = 0.009
Identities = 15/88 (17%), Positives = 27/88 (30%), Gaps = 5/88 (5%)
Query: 648 TLPSSVLEHINNDTVHSNVWDEIKALCKEGQKEVLEHIQEKFLCIICQELVYKPITLDCV 707
P V+ + + +E +C E + + +V + C
Sbjct: 7 GEPEQVIRKYTEELKVAP--EEDCIICMEKLAVASGYSDMTDSKALGPMVVGR--LTKCS 62
Query: 708 HTFCHDCLKRAFKIES-DACNSCPYCRK 734
H F CL + + D CP C+
Sbjct: 63 HAFHLLCLLAMYCNGNKDGSLQCPSCKT 90
>d1wgga_ d.15.1.1 (A:) Ubiquitin carboxyl-terminal hydrolase 14
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 96
Score = 34.6 bits (79), Expect = 0.006
Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Query: 3 VKIRSLDGSKNCVLVLSKRTLISDMKTQIENTLDVPVDKQRLFYKGKQLEDEYMLFDYNV 62
V ++ V + + K Q+ V +Q++ KG L+D+ + +
Sbjct: 10 VTVKWGKEKFEGVELNTDEP-PMVFKAQLFALTGVQPARQKVMVKGGTLKDD-DWGNIKM 67
Query: 63 NLNDVIQLMIKAD 75
+ +M AD
Sbjct: 68 KNGMTVLMMGSAD 80
>d2d9ta1 b.34.9.1 (A:8-67) Tudor domain-containing protein 3, TDRD3
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 60
Score = 32.8 bits (75), Expect = 0.010
Identities = 9/68 (13%), Positives = 24/68 (35%), Gaps = 14/68 (20%)
Query: 130 YKVGDYVDAILETEGAWFESQITHILVDINKEKPYDEDDLIFKVVHLKYKDDG-SSTMKF 188
+K GD A+ + ++ +++ + +K+ D G +
Sbjct: 3 WKPGDECFALYWEDNKFYRAEVEALHSSGMT-------------AVVKFTDYGNYEEVLL 49
Query: 189 DDIRPLPK 196
+I+P+
Sbjct: 50 SNIKPVQT 57
>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 98
Score = 33.6 bits (76), Expect = 0.012
Identities = 13/80 (16%), Positives = 29/80 (36%), Gaps = 7/80 (8%)
Query: 675 KEGQKEVLEHIQEKFLCIICQELVYKPITL-DCVHTFCHDCLKRAFKIESDACNSCPYCR 733
++ ++E ++FL I L+ P+ L T + R + + P+ R
Sbjct: 9 QQQEEETYADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHL----LSDQTDPFNR 64
Query: 734 KEMNKSCLETHSNDALQSIL 753
+ + N L+ +
Sbjct: 65 --SPLTMDQIRPNTELKEKI 82
>d1wima_ g.44.1.1 (A:) UbcM4-interacting protein 4 (KIAA0161) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 33.5 bits (76), Expect = 0.016
Identities = 11/61 (18%), Positives = 24/61 (39%), Gaps = 3/61 (4%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPPLESVPEDDEWF---CPSCKRDTSEVIAPG 375
C +C G+ +++ +CQ + CLK +E + ++ CP +
Sbjct: 8 CKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQEN 67
Query: 376 Q 376
+
Sbjct: 68 E 68
Score = 28.9 bits (64), Expect = 0.62
Identities = 11/50 (22%), Positives = 15/50 (30%), Gaps = 7/50 (14%)
Query: 691 CIICQELVYK---PITLDCVHTFCHDCLKRAFKIESDACN----SCPYCR 733
C +C C FC CLK+ ++ SCP
Sbjct: 8 CKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAA 57
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 56
Score = 29.7 bits (66), Expect = 0.14
Identities = 5/51 (9%), Positives = 14/51 (27%), Gaps = 5/51 (9%)
Query: 690 LCIICQELVY-KPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKS 739
LC I ++ ++ F + + P + ++
Sbjct: 2 LCAISGKVPRRPVLSPKSRTIFEKSL----LEQYVKDTGNDPITNEPLSIE 48
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 124
Score = 30.9 bits (69), Expect = 0.20
Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 13/82 (15%)
Query: 276 KLLAERTAEDEDHMSTEPKTLRQI-VPECTTCNDVETK------HCKDCG---CSICAGK 325
+ ER D + T K + V C C + C+DC C+ C +
Sbjct: 23 TMEQERIGRLVDRLETMRKNVAGDGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVE 82
Query: 326 TSPDK---LIVCEECQHYYHIW 344
TS ++ + +C+ C +W
Sbjct: 83 TSNNRPHPVWLCKICLEQREVW 104
>d2diqa1 b.34.9.1 (A:8-104) Tudor and KH domain-containing protein
TDRKH {Human (Homo sapiens) [TaxId: 9606]}
Length = 97
Score = 29.9 bits (67), Expect = 0.27
Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 15/85 (17%)
Query: 117 EDFVDLKPADSQYYKVGDYVDAILETEGAWFESQITHILVDINKEKPYDEDDLIFKVVHL 176
+ + VGD V A L T G+W+ +++ L + + L
Sbjct: 13 TQHYENSVPEDLTVHVGDIVAAPLPTNGSWYRARVLGTLEN--------------GNLDL 58
Query: 177 KYKDDGSS-TMKFDDIRPLPKHLIT 200
+ D G + D+R L ++
Sbjct: 59 YFVDFGDNGDCPLKDLRALRSDFLS 83
>d1vqo11 g.41.8.2 (1:1-56) Ribosomal protein L37e {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 56
Score = 27.8 bits (62), Expect = 0.67
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 708 HTFCHDCLKRAFKIESDACNSCPYCR 733
HT C C ++++ + C+SC + +
Sbjct: 16 HTKCRRCGEKSYHTKKKVCSSCGFGK 41
>d2ooja1 b.159.2.1 (A:2-134) Hypothetical protein SO1590 {Shewanella
oneidensis [TaxId: 70863]}
Length = 133
Score = 28.6 bits (64), Expect = 1.2
Identities = 15/73 (20%), Positives = 26/73 (35%), Gaps = 5/73 (6%)
Query: 420 GPIPGIEVGQSYLYRFQASEAGVHR--PHVSG-IHGREDVGAFSLVLSGGYEDDVDDGDS 476
G + G+ + + V G + GR+ G+F L G D +
Sbjct: 39 GELEARSQGEMLSAMTAVKGSAGYVAIEQVVGKLCGRQ--GSFVLQHFGIMTDGQNRLHL 96
Query: 477 FLYTGSGGRDLSG 489
+ SG +L+G
Sbjct: 97 EVVPHSGAGELTG 109
>d1mhna_ b.34.9.1 (A:) Survival motor neuron protein 1, smn {Human
(Homo sapiens) [TaxId: 9606]}
Length = 59
Score = 27.1 bits (60), Expect = 1.4
Identities = 14/66 (21%), Positives = 21/66 (31%), Gaps = 12/66 (18%)
Query: 130 YKVGDYVDAILETEGAWFESQITHILVDINKEKPYDEDDLIFKVVHLKYKDDGSSTMKFD 189
+KVGD AI +G + + I I D VV+ Y +
Sbjct: 4 WKVGDKCSAIWSEDGCIYPATIASI----------DFKRETCVVVYTGYGN--REEQNLS 51
Query: 190 DIRPLP 195
D+
Sbjct: 52 DLLSPI 57
>d1tbfa_ a.211.1.2 (A:) cGMP-specific 3',5'-cyclic phosphodiesterase
pde5a1-Ibmx {Human (Homo sapiens) [TaxId: 9606]}
Length = 326
Score = 29.6 bits (66), Expect = 1.6
Identities = 11/49 (22%), Positives = 18/49 (36%), Gaps = 4/49 (8%)
Query: 706 CVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKSCLETHSNDALQSILS 754
H H + F I +++ ++S LE H D IL+
Sbjct: 118 LSHDLDHPGVSNQFLINTNS----ELALMYNDESVLEHHHFDQCLMILN 162
>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein
Sakura) {Human (Homo sapiens) [TaxId: 9606]}
Length = 51
Score = 26.5 bits (58), Expect = 1.6
Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 7/45 (15%)
Query: 301 PECTTCNDVET-----KHCKDCGCSICAGKTS--PDKLIVCEECQ 338
P C +C + C DC + C +S + +C CQ
Sbjct: 1 PSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQ 45
>d1v5na_ g.49.1.3 (A:) Pdi-like hypothetical protein At1g60420
{Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 89
Score = 27.6 bits (61), Expect = 1.7
Identities = 10/39 (25%), Positives = 12/39 (30%), Gaps = 3/39 (7%)
Query: 319 CSICAGKTSPDKLIVCEECQHYYHIWCLKPP--LESVPE 355
C C + C+EC H C ES P
Sbjct: 50 CDKC-EEEGTIWSYHCDECDFDLHAKCALNEDTKESGPS 87
>d3dy8a1 a.211.1.2 (A:182-505) High-affinity cGMP-specific
3',5'-cyclic phosphodiesterase 9A, PDE9A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 324
Score = 29.2 bits (65), Expect = 2.0
Identities = 12/67 (17%), Positives = 20/67 (29%), Gaps = 4/67 (5%)
Query: 688 KFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKSCLETHSND 747
Q + +T H H ++I + + Y + S LE H
Sbjct: 91 SLQEKFSQTDILILMTAAICHDLDHPGYNNTYQINARTELAVRYN----DISPLENHHCA 146
Query: 748 ALQSILS 754
IL+
Sbjct: 147 VAFQILA 153
>d1wf3a2 d.52.3.1 (A:181-298) GTPase Era C-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 118
Score = 27.9 bits (62), Expect = 2.1
Identities = 9/72 (12%), Positives = 24/72 (33%), Gaps = 8/72 (11%)
Query: 681 VLEHIQEKFLCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSCPYCRKEMNKSC 740
V E ++E+ + + E+ Y + + I++ Y + K+
Sbjct: 13 VAEILREEAMKRLWHEVPYA---VATKVEEVAERENGVLYIKAIL-----YVERPSQKAI 64
Query: 741 LETHSNDALQSI 752
+ ++ I
Sbjct: 65 VIGEGGRKIKEI 76
>d1q3qa2 c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon
Thermococcus sp. ks-1, alpha chain [TaxId: 79679]}
Length = 153
Score = 28.0 bits (62), Expect = 2.3
Identities = 8/69 (11%), Positives = 25/69 (36%), Gaps = 5/69 (7%)
Query: 16 LVLSKRTLISDMKTQIEN----TLDVPVDKQRLFYKGK-QLEDEYMLFDYNVNLNDVIQL 70
+V+ K + M ++EN ++ ++ ++ K + L + +++
Sbjct: 3 VVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKD 62
Query: 71 MIKADIDKN 79
M+
Sbjct: 63 MVDHIAQTG 71
>d2coba1 a.4.1.15 (A:8-70) Ligand-dependent corepressor (LCoR)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 63
Score = 26.1 bits (57), Expect = 3.4
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 623 KANLKRKVSSETLGESKVKKSKQVYTLPSSVLEH 656
L+ +S G+ V K++ +Y +P S LE+
Sbjct: 9 SEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEY 42
>d2ct7a1 g.44.1.4 (A:8-80) Ring finger protein 31 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 73
Score = 26.1 bits (57), Expect = 4.4
Identities = 5/38 (13%), Positives = 9/38 (23%), Gaps = 2/38 (5%)
Query: 311 TKHCKDCGCSICAGKTSPDKLIVCEECQHYYHIWCLKP 348
C C C +C + + C +
Sbjct: 18 FLWCAQCSFGFI--YEREQLEATCPQCHQTFCVRCKRQ 53
>d1l7da2 c.23.12.2 (A:1-143,A:327-377) Nicotinamide nucleotide
transhydrogenase dI component {Rhodospirillum rubrum
[TaxId: 1085]}
Length = 194
Score = 27.4 bits (60), Expect = 5.0
Identities = 7/56 (12%), Positives = 15/56 (26%), Gaps = 2/56 (3%)
Query: 309 VETKHCKDCGCSICAGKTSPDKLIVCEECQHYYH--IWCLKPPLESVPEDDEWFCP 362
VE + A + + +W ++ P+ + DE
Sbjct: 35 VEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQRPMTAEEGTDEVALI 90
>d2c8sa1 a.3.1.1 (A:24-172) Cytochrome c-L (MoxG) {Methylobacterium
extorquens [TaxId: 408]}
Length = 149
Score = 27.2 bits (59), Expect = 5.3
Identities = 14/92 (15%), Positives = 26/92 (28%), Gaps = 14/92 (15%)
Query: 521 RGNEAVDWKKGKPVRVMRNFHGAKHSKYAP-KEGNRYDGIYKVVKYYPVKGSSDFIVWRF 579
N V + G + P E D + + + + ++
Sbjct: 59 NDNYWTYPSNTTDVGLFATIFGGANGMMGPHNENLTPDEMLQTIAW--IR---------- 106
Query: 580 HLQRDDEAPAPW-TEEGKKRIKDLGLQMIYPE 610
HL + A W +E KK + P+
Sbjct: 107 HLYTGPKQDAVWLNDEQKKAYTPYKQGEVIPK 138
>d1igra3 g.3.9.1 (A:150-299) Type 1 insulin-like growth factor
receptor Cys-rich domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 150
Score = 26.9 bits (58), Expect = 5.6
Identities = 13/64 (20%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Query: 303 CTTCNDVETKHCKDCGCSICAGKTSPDKLIVCEECQHYYHIW-CLKPPLESVPEDDEWFC 361
T T++ + C ++PD C C+HYY+ C+ + + W C
Sbjct: 38 STCGKRACTENNECCHPECLGSCSAPDNDTACVACRHYYYAGVCVPACPPNTYRFEGWRC 97
Query: 362 PSCK 365
Sbjct: 98 VDRD 101
>d2gfoa1 d.3.1.9 (A:762-1109) Ubiquitin carboxyl-terminal hydrolase
8 {Human (Homo sapiens) [TaxId: 9606]}
Length = 348
Score = 27.8 bits (60), Expect = 5.7
Identities = 14/117 (11%), Positives = 27/117 (23%), Gaps = 2/117 (1%)
Query: 254 LETRLENCKIKFVKELYKIESPKLLAERTAEDEDHMSTEPKTLRQIVPECTTCNDVETKH 313
L L K E + E + I+ T
Sbjct: 115 LMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQ 174
Query: 314 CKDCGCSICAGKTSPDKLIVCEECQHYYHIWCLK--PPLESVPEDDEWFCPSCKRDT 368
C C + + CL+ E + +++ ++C C+
Sbjct: 175 CLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRARR 231
>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 67
Score = 25.4 bits (55), Expect = 6.6
Identities = 10/56 (17%), Positives = 17/56 (30%), Gaps = 8/56 (14%)
Query: 691 CIICQE----LVYKPITLDCVHTFCHDCLKRAFKIESDACNS----CPYCRKEMNK 738
C+IC + L K C FC + + + C C ++
Sbjct: 8 CMICSKKFSLLNRKHHCRSCGGVFCQEHSSNSIPLPDLGIYEPVRVCDSCFEDYEF 63
>d1un2a_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA)
{Escherichia coli [TaxId: 562]}
Length = 195
Score = 26.9 bits (59), Expect = 6.8
Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 6/56 (10%)
Query: 335 EECQHYYHIWCLKPPLESVPEDDEWF---CPSCKRDTSEVIAPGQKLKDSKKKARM 387
E+ + Y L+ P+ P+ E+F CP C + + K + +M
Sbjct: 99 EDGKQYT---TLEKPVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKM 151
>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7,
IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 93
Score = 25.6 bits (56), Expect = 8.6
Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 9/54 (16%)
Query: 690 LCIICQELVYKPITLDCVHTFCHDCLKRAFKIESDACNSC-PYCRKEMNKSCLE 742
C IC + + + D + C++C F C C Y R+E ++C +
Sbjct: 18 FCEICGDQIGLTVEGD-LFVACNEC---GFPA----CRPCYEYERREGTQNCPQ 63
>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 64
Score = 25.0 bits (54), Expect = 8.9
Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 13/51 (25%)
Query: 300 VPECTTCN-----DVETKHCKDCG---CSICAGKTSP-----DKLIVCEEC 337
V C C V HC+ CG C+ C+ K + + VC+ C
Sbjct: 8 VQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNALTPSSKKPVRVCDAC 58
>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans,
strain 27774 [TaxId: 876]}
Length = 45
Score = 24.3 bits (53), Expect = 8.9
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Query: 333 VCEECQHYYH-IWCLKPPLESVPEDDEWFCPSCK 365
VC C + Y P + +P+D W CP C
Sbjct: 5 VCNVCGYEYDPAEHDNVPFDQLPDD--WCCPVCG 36
>d1lkoa2 g.41.5.1 (A:148-191) Rubrerythrin, C-terminal domain
{Desulfovibrio vulgaris [TaxId: 881]}
Length = 44
Score = 24.3 bits (53), Expect = 9.8
Identities = 6/32 (18%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 314 CKDCGCSICAGKTSPDKLIVCEECQHYYHIWC 345
C++CG + G +P+ C + ++ +
Sbjct: 11 CRNCGY-VHEGTGAPELCPACAHPKAHFELLG 41
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.134 0.403
Gapped
Lambda K H
0.267 0.0700 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,901,998
Number of extensions: 145342
Number of successful extensions: 669
Number of sequences better than 10.0: 1
Number of HSP's gapped: 622
Number of HSP's successfully gapped: 122
Length of query: 764
Length of database: 2,407,596
Length adjustment: 92
Effective length of query: 672
Effective length of database: 1,144,436
Effective search space: 769060992
Effective search space used: 769060992
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (25.8 bits)