RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11303
(166 letters)
>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 297
Score = 32.3 bits (73), Expect = 0.021
Identities = 15/107 (14%), Positives = 30/107 (28%), Gaps = 25/107 (23%)
Query: 51 RSILITSCETALGLQLALHFSSLGFRVFAGFKPSGGENKSECKSEESKSDAYKILRAKLK 110
+ ++T T +G + LG V + E A L+A L
Sbjct: 13 QVAIVTGGATGIGKAIVKELLELGSNVVIA-----------SRKLERLKSAADELQANLP 61
Query: 111 SCQNHLLSASVNLDDSNVLKVITLPLDVTREDSLHEAVDIIRRHLPA 157
+ +VI + ++ E+ ++ V
Sbjct: 62 PTKQA--------------RVIPIQCNIRNEEEVNNLVKSTLDTFGK 94
>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer
{Caenorhabditis elegans [TaxId: 6239]}
Length = 250
Score = 31.8 bits (71), Expect = 0.027
Identities = 20/117 (17%), Positives = 35/117 (29%), Gaps = 37/117 (31%)
Query: 51 RSILITSCETALGLQLALHFSSLG--FRVFAGFKPSGGENKSECKSEESKSDAYKILRAK 108
S+++T +GL L + A + E ++ I +
Sbjct: 4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIAT-----------ARDVEKATELKSIKDS- 51
Query: 109 LKSCQNHLLSASVNLDDSNVLKVITLPLDVTREDSLHEAVDIIRRHLPAGEDGWDII 165
+V LPL VT + SL V + + G DG ++
Sbjct: 52 ---------------------RVHVLPLTVTCDKSLDTFVSKVGEIV--GSDGLSLL 85
>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase,
PGDH {Human (Homo sapiens) [TaxId: 9606]}
Length = 254
Score = 30.7 bits (69), Expect = 0.069
Identities = 13/105 (12%), Positives = 26/105 (24%), Gaps = 28/105 (26%)
Query: 51 RSILITSCETALGLQLALHFSSLGFRVFAGFKPSGGENKSECKSEESKSDAYKILRAKLK 110
+ L+T +G A G +V + E+ L + +
Sbjct: 4 KVALVTGAAQGIGRAFAEALLLKGAKVALV-----------DWNLEAGVQCKAALHEQFE 52
Query: 111 SCQNHLLSASVNLDDSNVLKVITLPLDVTREDSLHEAVDIIRRHL 155
K + + DV + L + + H
Sbjct: 53 P-----------------QKTLFIQCDVADQQQLRDTFRKVVDHF 80
>d2zjrc1 c.22.1.1 (C:2-198) Ribosomal protein L4 {Deinococcus
radiodurans [TaxId: 1299]}
Length = 197
Score = 29.7 bits (66), Expect = 0.11
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 119 ASVNLDDSNVLKVITLPLDVTREDSLHEAVD 149
A +N+ N + I LPL LHE V
Sbjct: 1 AQINVIGQNGGRTIELPLPEVNSGVLHEVVT 31
>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus
bisporus) [TaxId: 5341]}
Length = 260
Score = 29.7 bits (66), Expect = 0.12
Identities = 13/105 (12%), Positives = 29/105 (27%), Gaps = 29/105 (27%)
Query: 51 RSILITSCETALGLQLALHFSSLGFRVFAGFKPSGGENKSECKSEESKSDAYKILRAKLK 110
++I++T +GL ++ G V +S + + + +
Sbjct: 10 KTIIVTGGNRGIGLAFTRAVAAAGANVAVI-----------YRSAADAVEVTEKVGKEFG 58
Query: 111 SCQNHLLSASVNLDDSNVLKVITLPLDVTREDSLHEAVDIIRRHL 155
K DV+ D + + + I L
Sbjct: 59 V------------------KTKAYQCDVSNTDIVTKTIQQIDADL 85
>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine
reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 236
Score = 28.2 bits (62), Expect = 0.41
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 51 RSILITSCETALGLQLALHFSSLGFRVFA 79
R +L+ ALG + F + + V +
Sbjct: 3 RRVLVYGGRGALGSRCVQAFRARNWWVAS 31
>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine
reductase) {Nematode (Caenorhabditis elegans) [TaxId:
6239]}
Length = 235
Score = 28.3 bits (62), Expect = 0.43
Identities = 6/31 (19%), Positives = 14/31 (45%)
Query: 49 TARSILITSCETALGLQLALHFSSLGFRVFA 79
++ +++ + ALG + F G+ V
Sbjct: 1 SSGKVIVYGGKGALGSAILEFFKKNGYTVLN 31
>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima
[TaxId: 2336]}
Length = 251
Score = 27.7 bits (61), Expect = 0.62
Identities = 15/105 (14%), Positives = 32/105 (30%), Gaps = 29/105 (27%)
Query: 51 RSILITSCETALGLQLALHFSSLGFRVFAGFKPSGGENKSECKSEESKSDAYKILRAKLK 110
R L+T LG +A + G V ++ E S+A + L K
Sbjct: 6 RVALVTGGSRGLGFGIAQGLAEAGCSVVVA-----------SRNLEEASEAAQKLTEKYG 54
Query: 111 SCQNHLLSASVNLDDSNVLKVITLPLDVTREDSLHEAVDIIRRHL 155
+ + DV+ + + + ++ ++
Sbjct: 55 V------------------ETMAFRCDVSNYEEVKKLLEAVKEKF 81
>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st
ketoreductase module {Saccharopolyspora erythraea
[TaxId: 1836]}
Length = 259
Score = 26.9 bits (58), Expect = 1.1
Identities = 6/29 (20%), Positives = 12/29 (41%)
Query: 51 RSILITSCETALGLQLALHFSSLGFRVFA 79
++L+T +G Q+A + G
Sbjct: 10 GTVLVTGGTGGVGGQIARWLARRGAPHLL 38
>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI
{Human (Homo sapiens) [TaxId: 9606]}
Length = 244
Score = 26.9 bits (59), Expect = 1.1
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 49 TARSILITSCETALGLQLALHFSSLGFRVFA 79
T +LIT +G A F+ L ++
Sbjct: 6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVL 36
>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
{Pseudomonas sp., lb400 [TaxId: 306]}
Length = 276
Score = 26.9 bits (59), Expect = 1.1
Identities = 14/107 (13%), Positives = 26/107 (24%), Gaps = 33/107 (30%)
Query: 51 RSILITSCETALGLQLALHFSSLGFRVFAGFKPSGGENKSECKSEESKSDAYKILRAKLK 110
++LIT + LG L F + G +V ++ E+
Sbjct: 6 EAVLITGGASGLGRALVDRFVAEGAKVAV-----LDKSAERLAELETDHGD--------- 51
Query: 111 SCQNHLLSASVNLDDSNVLKVITLPLDVTREDSLHEAVDIIRRHLPA 157
V+ + DV + +A
Sbjct: 52 -------------------NVLGIVGDVRSLEDQKQAASRCVARFGK 79
>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 237
Score = 26.6 bits (58), Expect = 1.4
Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Query: 51 RSILITSCETALGLQLALHFSSLGFRVF-AGFKPSGGENKSECKSEESKSDAYKILRAKL 109
RS+L+T +GL +A ++ G +V + + + + SDA +
Sbjct: 8 RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAV 67
Query: 110 KSCQNHL 116
+ Q +
Sbjct: 68 EEHQGPV 74
>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum
[TaxId: 144185]}
Length = 258
Score = 26.6 bits (58), Expect = 1.4
Identities = 20/105 (19%), Positives = 33/105 (31%), Gaps = 28/105 (26%)
Query: 51 RSILITSCETALGLQLALHFSSLGFRVFAGFKPSGGENKSECKSEESKSDAYKILRAKLK 110
R +LIT + LG A+ ++ G ++ S G S+ E+ DA
Sbjct: 5 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDA--------- 55
Query: 111 SCQNHLLSASVNLDDSNVLKVITLPLDVTREDSLHEAVDIIRRHL 155
+V+T DV+ E + V
Sbjct: 56 -------------------EVLTTVADVSDEAQVEAYVTATTERF 81
>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid
dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 26.8 bits (58), Expect = 1.4
Identities = 12/60 (20%), Positives = 23/60 (38%)
Query: 53 ILITSCETALGLQLALHFSSLGFRVFAGFKPSGGENKSECKSEESKSDAYKILRAKLKSC 112
+LIT C + +GL LA+ +S + F + E +++ A +
Sbjct: 5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64
>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium
[TaxId: 1404]}
Length = 261
Score = 26.6 bits (58), Expect = 1.6
Identities = 18/105 (17%), Positives = 35/105 (33%), Gaps = 29/105 (27%)
Query: 51 RSILITSCETALGLQLALHFSSLGFRVFAGFKPSGGENKSECKSEESKSDAYKILRAKLK 110
+ ++IT T LG +A+ F++ +V ++ SK D + ++K
Sbjct: 8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYR--------------SKEDEANSVLEEIK 53
Query: 111 SCQNHLLSASVNLDDSNVLKVITLPLDVTREDSLHEAVDIIRRHL 155
+ I + DVT E + V +
Sbjct: 54 KVGG---------------EAIAVKGDVTVESDVINLVQSAIKEF 83
>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly
(Drosophila lebanonensis) [TaxId: 7225]}
Length = 254
Score = 26.2 bits (57), Expect = 1.8
Identities = 3/29 (10%), Positives = 11/29 (37%)
Query: 51 RSILITSCETALGLQLALHFSSLGFRVFA 79
++++ + +GL + + F
Sbjct: 6 KNVIFVAALGGIGLDTSRELVKRNLKNFV 34
>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase
{Streptomyces hydrogenans [TaxId: 1905]}
Length = 254
Score = 26.1 bits (57), Expect = 2.4
Identities = 17/105 (16%), Positives = 27/105 (25%), Gaps = 33/105 (31%)
Query: 51 RSILITSCETALGLQLALHFSSLGFRVFAGFKPSGGENKSECKSEESKSDAYKILRAKLK 110
++++IT LG + A + G RV +E + + L
Sbjct: 6 KTVIITGGARGLGAEAARQAVAAGARVVLA-----------DVLDEEGAATARELGD--- 51
Query: 111 SCQNHLLSASVNLDDSNVLKVITLPLDVTREDSLHEAVDIIRRHL 155
LDVT E+ V R
Sbjct: 52 -------------------AARYQHLDVTIEEDWQRVVAYAREEF 77
>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase
{Escherichia coli [TaxId: 562]}
Length = 243
Score = 25.9 bits (56), Expect = 2.5
Identities = 6/29 (20%), Positives = 13/29 (44%)
Query: 51 RSILITSCETALGLQLALHFSSLGFRVFA 79
+ L+T +G +A ++ G +V
Sbjct: 5 KIALVTGASRGIGRAIAETLAARGAKVIG 33
>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 248
Score = 25.8 bits (55), Expect = 3.0
Identities = 14/69 (20%), Positives = 20/69 (28%), Gaps = 4/69 (5%)
Query: 51 RSILITSCETALGLQLALHFSSL---GFRVFA-GFKPSGGENKSECKSEESKSDAYKILR 106
SILIT C LGL L +L +F + + S +I
Sbjct: 3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDL 62
Query: 107 AKLKSCQNH 115
+
Sbjct: 63 RNFDAYDKL 71
>d1zfja4 d.37.1.1 (A:95-220) Type II inosine monophosphate
dehydrogenase CBS domains {Streptococcus pyogenes
[TaxId: 1314]}
Length = 126
Score = 25.2 bits (54), Expect = 3.1
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 131 VITLPLDVTREDSLHEAVDIIRRH 154
VI P +T E + EA ++++R+
Sbjct: 3 VIIDPFFLTPEHKVSEAEELMQRY 26
>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase
{Pseudomonas fragi [TaxId: 296]}
Length = 260
Score = 25.5 bits (55), Expect = 3.8
Identities = 14/105 (13%), Positives = 37/105 (35%), Gaps = 28/105 (26%)
Query: 51 RSILITSCETALGLQLALHFSSLGFRVFAGFKPSGGENKSECKSEESKSDAYKILRAKLK 110
+ ++T + +GL +A ++ G + + ++ + +RA L
Sbjct: 5 KVAVVTGSTSGIGLGIATALAAQGADIVLN-----------GFGDAAEIEK---VRAGLA 50
Query: 111 SCQNHLLSASVNLDDSNVLKVITLPLDVTREDSLHEAVDIIRRHL 155
+ KV+ D+++ +++ VD R +
Sbjct: 51 AQHGV--------------KVLYDGADLSKGEAVRGLVDNAVRQM 81
>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 248
Score = 25.2 bits (54), Expect = 3.9
Identities = 7/29 (24%), Positives = 9/29 (31%)
Query: 51 RSILITSCETALGLQLALHFSSLGFRVFA 79
+IT + LGL A G
Sbjct: 6 LVAVITGGASGLGLATAERLVGQGASAVL 34
>d1d6za2 d.17.2.1 (A:91-185) Copper amine oxidase, domains 1 and 2
{Escherichia coli [TaxId: 562]}
Length = 95
Score = 24.4 bits (53), Expect = 4.1
Identities = 6/26 (23%), Positives = 13/26 (50%)
Query: 135 PLDVTREDSLHEAVDIIRRHLPAGED 160
PL+ D + +AV+I++ +
Sbjct: 5 PLNALTADEIKQAVEIVKASADFKPN 30
>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase
{Oil seed rape (Brassica napus) [TaxId: 3708]}
Length = 244
Score = 25.1 bits (54), Expect = 4.5
Identities = 6/28 (21%), Positives = 12/28 (42%)
Query: 53 ILITSCETALGLQLALHFSSLGFRVFAG 80
+++T +G +AL G +V
Sbjct: 4 VVVTGASRGIGKAIALSLGKAGCKVLVN 31
>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter
oxydans [TaxId: 442]}
Length = 260
Score = 25.1 bits (54), Expect = 4.5
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 51 RSILITSCETALGLQLALHFSSLGFRVFA 79
+ L+T +GL AL + G +
Sbjct: 6 KVCLVTGAGGNIGLATALRLAEEGTAIAL 34
>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 184
Score = 24.9 bits (53), Expect = 4.8
Identities = 18/110 (16%), Positives = 31/110 (28%), Gaps = 3/110 (2%)
Query: 59 ETALGLQLAL--HFSSLGFRVFAG-FKPSGGENKSECKSEESKSDAYKILRAKLKSCQNH 115
E AL L LA + + +K S +I + +
Sbjct: 7 EHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAAF 66
Query: 116 LLSASVNLDDSNVLKVITLPLDVTREDSLHEAVDIIRRHLPAGEDGWDII 165
+ + L +++ D L D I HLP + +I
Sbjct: 67 GAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLI 116
>d1jr1a4 d.37.1.1 (A:113-232) Type II inosine monophosphate
dehydrogenase CBS domains {Chinese hamster (Cricetulus
griseus) [TaxId: 10029]}
Length = 120
Score = 24.3 bits (52), Expect = 5.7
Identities = 6/24 (25%), Positives = 13/24 (54%)
Query: 131 VITLPLDVTREDSLHEAVDIIRRH 154
IT P+ ++ +D + + + RH
Sbjct: 2 FITDPVVLSPKDRVRDVFEAKARH 25
>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein
reductase {Streptomyces coelicolor [TaxId: 1902]}
Length = 257
Score = 24.3 bits (52), Expect = 7.8
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 54 LITSCETALGLQLALHFSSLGFRVFA 79
L+T + +GL++A G RVF
Sbjct: 6 LVTGATSGIGLEIARRLGKEGLRVFV 31
>d1w2za2 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 and 2
{Pea seedling (Pisum sativum) [TaxId: 3888]}
Length = 93
Score = 23.7 bits (51), Expect = 8.0
Identities = 5/28 (17%), Positives = 10/28 (35%)
Query: 135 PLDVTREDSLHEAVDIIRRHLPAGEDGW 162
PLD ++ I++ P +
Sbjct: 4 PLDPLTKEEFLAVQTIVQNKYPISNNRL 31
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.135 0.387
Gapped
Lambda K H
0.267 0.0621 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 551,718
Number of extensions: 21291
Number of successful extensions: 101
Number of sequences better than 10.0: 1
Number of HSP's gapped: 101
Number of HSP's successfully gapped: 34
Length of query: 166
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 87
Effective length of database: 1,322,926
Effective search space: 115094562
Effective search space used: 115094562
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (22.9 bits)