RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11306
(413 letters)
>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of
P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 228
Score = 234 bits (598), Expect = 3e-76
Identities = 141/227 (62%), Positives = 174/227 (76%), Gaps = 1/227 (0%)
Query: 28 PVERFEYKYSFKPPYLAQKDGSVPFWEYGGNCIASLENVRVAPSLRSQKGAIWTKQTTNF 87
P RFEYKYSFK P+L Q DG+VPFW + GN I S + +R+APSL+SQ+G++WTK F
Sbjct: 1 PHRRFEYKYSFKGPHLVQSDGTVPFWAHAGNAIPSADQIRIAPSLKSQRGSVWTKTKAAF 60
Query: 88 EWWNVDIVFRVTGRGRIGADGLAFWYTSEKGSYDGEVFGSSDRWKGLGLFFDSFDNDNNH 147
E W V++ FRVTGRGRIGADGLA WYT +G DG VFGS+D W G+G+FFDSFDND
Sbjct: 61 ENWEVEVTFRVTGRGRIGADGLAIWYTENQGL-DGPVFGSADMWNGVGIFFDSFDNDGKK 119
Query: 148 NNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPYPTRARIQYYMNTLTVWFHNGM 207
NNP I+ V N+G + +DHQNDGA+Q+LA C RDFRNKPYP RA+I YY TLTV +NG
Sbjct: 120 NNPAIVVVGNNGQINYDHQNDGATQALASCQRDFRNKPYPVRAKITYYQKTLTVMINNGF 179
Query: 208 TNNEQDIEVCLRVENIYLPKEGYFGVSAATGGLADDHDILHFLTSSL 254
T ++ D E C +VEN+ +P +G+FG+SAATGGLADDHD+L FLT L
Sbjct: 180 TPDKNDYEFCAKVENMVIPTQGHFGISAATGGLADDHDVLSFLTFQL 226
Score = 37.4 bits (86), Expect = 0.002
Identities = 15/21 (71%), Positives = 16/21 (76%)
Query: 293 PVERFEYKYSFKPPYLAQKDG 313
P RFEYKYSFK P+L Q DG
Sbjct: 1 PHRRFEYKYSFKGPHLVQSDG 21
>d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 221
Score = 198 bits (504), Expect = 3e-62
Identities = 42/223 (18%), Positives = 83/223 (37%), Gaps = 15/223 (6%)
Query: 35 KYSFKPPYLAQKDGSVPFWEYGGNCIASLENVRVAPSLRSQKGAIWTKQTTNF-EWWNVD 93
+ P L W+ G + + + ++ KG++W KQ + + + ++
Sbjct: 7 SSDYSLPDLINTRKVPNNWQTGEQASLEEGRIVLTSN-QNSKGSLWLKQGFDLKDSFTME 65
Query: 94 IVFRVTGRGRIGADGLAFWYTSEK-GSYDGEVFGSSDRWKGLGLFFDSFDNDNNHNNPYI 152
FR G G++FW+ + D +++ + GL L D+ P +
Sbjct: 66 WTFRSVGYSGQTDGGISFWFVQDSNIPRDKQLYNGPVNYDGLQLLVDNNGP----LGPTL 121
Query: 153 MAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPYPTRARIQYYMNTLTVWFHNGMTNNEQ 212
+NDG D QS A CL +++ P+ R+ Y + + +
Sbjct: 122 RGQLNDGQKPVDKTKIY-DQSFASCLMGYQDSSVPSTIRVTYDLEDDNL------LKVQV 174
Query: 213 DIEVCLRVENIYLPKEGY-FGVSAATGGLADDHDILHFLTSSL 254
D +VC + + P Y GV+A G + ++ +
Sbjct: 175 DNKVCFQTRKVRFPSGSYRIGVTAQNGAVNNNAESFEIFKMQF 217
>d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 218
Score = 196 bits (499), Expect = 1e-61
Identities = 45/231 (19%), Positives = 76/231 (32%), Gaps = 21/231 (9%)
Query: 31 RFEYKYSFKPPYLAQKD--GSVPFWEYGGNCIASLENVRVAPSLRSQKGAIWTKQTTNF- 87
++ YS P L D + W G + P ++ KG++W K +
Sbjct: 1 KWNKGYSL-PNLLEVTDQQKELSQWTLGDKVKLEEGRFVLTPG-KNTKGSLWLKPEYSIK 58
Query: 88 EWWNVDIVFRVTGRGRIGADGLAFWYTSEKGSY-DGEVFGSSDRWKGLGLFFDSFDNDNN 146
+ ++ FR G GLAFW GSS ++ GL + D
Sbjct: 59 DAMTIEWTFRSFGFRGSTKGGLAFWLKQGNEGDSTELFGGSSKKFNGLMILLRLDDKL-- 116
Query: 147 HNNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPYPTRARIQYYMNTLTVWFHNG 206
+ A +NDG D ++ A CL +++ P+ R+ Y +
Sbjct: 117 --GESVTAYLNDGTKDLDIESS---PYFASCLFQYQDSMVPSTLRLTYNPLDNHL----- 166
Query: 207 MTNNEQDIEVCLRVENIYLPKEG--YFGVSAATGGLADDHDILHFLTSSLL 255
+ D VC + + G SA + +IL +
Sbjct: 167 -LKLQMDNRVCFQTRKVKFMGSSPFRIGTSAINDASKESFEILKMKLYDGV 216
>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus
angolensis) [TaxId: 182271]}
Length = 241
Score = 92.1 bits (228), Expect = 4e-22
Identities = 33/183 (18%), Positives = 61/183 (33%), Gaps = 6/183 (3%)
Query: 79 IWTKQTTNFEWWNVDIVFRVTGRGRIGADGLAFWYTSEKGSYDGEVFGSSDRWKGLGLFF 138
+W K ++ + F + GADG+AF+ + G G
Sbjct: 58 LWEKSSSRVANFQSQFSFSLKSPLSNGADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQ 117
Query: 139 DSFDNDNNHN--NPYIMAVVNDGNMAFDHQN-DGASQSLAGCLRDFRNKPYPTRARIQYY 195
++ N + + N + + H D S ++ R + +
Sbjct: 118 NTSANQVIAVEFDTFYAQDSNTWDPNYPHIGIDVNSIRSVKTVKWDRRDGQSLNVLVTFN 177
Query: 196 MNTLTVWFHNGMTNNEQDIEVCLRVE-NIYLPKEGYFGVSAATGGLADDHDILHF-LTSS 253
+T + ++ EV V+ LP+ G SAA+G H + + TS+
Sbjct: 178 PSTRNLDVVATYSDG-TRYEVSYEVDVRSVLPEWVRVGFSAASGEQYQTHTLESWSFTST 236
Query: 254 LLP 256
LL
Sbjct: 237 LLY 239
>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin
{Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Length = 233
Score = 92.1 bits (228), Expect = 5e-22
Identities = 39/189 (20%), Positives = 62/189 (32%), Gaps = 26/189 (13%)
Query: 79 IWTKQTTNFEWWNVDIVFRVTGRGR-IGADGLAFWYTSEK------GSYDGEVFGSSDRW 131
IW T + F + ADGLAF G + G GS+ +
Sbjct: 57 IWDNTTGTVASFATSFTFNIQVPNNAGPADGLAFALVPVGSQPKDKGGFLGLFDGSNSNF 116
Query: 132 KGLGLFFDSFDN-DNNHNNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPYPTRA 190
+ + FD+ N D + +I VN + D + A L + + A
Sbjct: 117 HTVAVEFDTLYNKDWDPTERHIGIDVNSIRSIKTTRWDFVNGENAEVLITYDSSTNLLVA 176
Query: 191 RIQYYMNTLTVWFHNGMTNNEQDIEVCLRVE-NIYLPKEGYFGVSAATGGLADD---HDI 246
+ Y + + V V+ LP+ G SA TG + +D+
Sbjct: 177 SLVY-------------PSQKTSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVETNDV 223
Query: 247 LHF-LTSSL 254
L + S L
Sbjct: 224 LSWSFASKL 232
>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin
{Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Length = 226
Score = 80.5 bits (198), Expect = 4e-18
Identities = 25/182 (13%), Positives = 53/182 (29%), Gaps = 14/182 (7%)
Query: 79 IWTKQTTNFEWWNVDIVFRVTGRG-RIGADGLAFWYTSEKGSYDGEVFGSSDRWKGLGLF 137
I + N ++ + FR+ + A GLAF GS +
Sbjct: 54 INDRTIDNLASFSTNFTFRINAKNIENSAYGLAFALVPV-GSRPKLKGRYLGLFNTTNYD 112
Query: 138 FDSFDNDNNHNNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPYPTRARIQYYMN 197
D+ + ++ ++ G + R N
Sbjct: 113 RDAHTVAVVFDTVSNRIEIDVNSIRPIATESCNFGHNNG-------EKAEVRITYDSPKN 165
Query: 198 TLTVWFHNGMTNNEQDIEVCLRVENIYLPKEGYFGVSAATGGLAD---DHDILHF-LTSS 253
L V + + + + +E + G SA +G + H++L + +S+
Sbjct: 166 DLRVSLLYPSSEEKCHVSATVPLEK-EVEDWVSVGFSATSGSKKETTETHNVLSWSFSSN 224
Query: 254 LL 255
+
Sbjct: 225 FI 226
>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin
{Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a
[TaxId: 3885]}
Length = 228
Score = 79.1 bits (194), Expect = 1e-17
Identities = 33/183 (18%), Positives = 60/183 (32%), Gaps = 18/183 (9%)
Query: 79 IWTKQTTNFEWWNVDIVFRVTGRGR-IGADGLAFWYTSEKGSYDGEVFGSSDRWKGLGLF 137
I K + N +N + F + + + I A GLAF + G+
Sbjct: 56 IQIKDSNNVASFNTNFTFIIRAKNQSISAYGLAFALVP-----VNSPPQKKQEFLGI--- 107
Query: 138 FDSFDNDNNHNNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPYPTRARIQY--Y 195
N+ N + V N D + + + T +I Y
Sbjct: 108 --FNTNNPEPNARTVAVVFNTFKNRIDFDKNFIKPYVNENCDFHKYNGEKTDVQITYDSS 165
Query: 196 MNTLTVWFHNGMTNNEQDIEVCLRVENIYLPKEGYFGVSAATGGLADD---HDILHF-LT 251
N L V+ H ++ + + + +E + + G S +G D HD+L + +
Sbjct: 166 NNDLRVFLHFTVSQVKCSVSATVHLEK-EVDEWVSVGFSPTSGLTEDTTETHDVLSWSFS 224
Query: 252 SSL 254
S
Sbjct: 225 SKF 227
>g2ltn.1 b.29.1.1 (A:,B:) Legume lectin {Garden pea (Pisum sativum)
[TaxId: 3888]}
Length = 229
Score = 77.5 bits (190), Expect = 6e-17
Identities = 36/221 (16%), Positives = 69/221 (31%), Gaps = 27/221 (12%)
Query: 53 WEYGGNCIASLENVRVAPSLRSQKG--------AIWTKQTTNFEWWNVDIVFRVTG-RGR 103
+ G+ + E + + ++++ G IW ++T N + F +
Sbjct: 18 LIFQGDGYTTKEKLTLTKAVKNTVGRALYSSPIHIWDRETGNVANFVTSFTFVINAPNSY 77
Query: 104 IGADGLAFWYTSEKGSYDGEVFGSSDRWKGLGLFFDSFDNDNNHN-----NPYIMAVVND 158
ADG F+ + G LG+F + + + + A +
Sbjct: 78 NVADGFTFFIAPV-DTKPQTGGG------YLGVFNSAEYDKTTQTVAVEFDTFYNAAWDP 130
Query: 159 GNMAFD-HQNDGASQSLAGCLRDFRN-KPYPTRARIQYYMNTLTVWFHNGMTNNEQDIEV 216
N + + +S+ +N + N LTV N +
Sbjct: 131 SNRDRHIGIDVNSIKSVNTKSWKLQNGEEANVVIAFNAATNVLTVSLTY---PNVTSYTL 187
Query: 217 CLRVE-NIYLPKEGYFGVSAATGGLADDHDILHFLTSSLLP 256
V +P+ G SA TG H++L + S L
Sbjct: 188 SDVVSLKDVVPEWVRIGFSATTGAEYAAHEVLSWSFHSELS 228
>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa),
isolectin b4 [TaxId: 3911]}
Length = 233
Score = 75.5 bits (185), Expect = 2e-16
Identities = 36/207 (17%), Positives = 57/207 (27%), Gaps = 23/207 (11%)
Query: 63 LENVRVAPSLRSQKGAIWTKQTTNFEWWNVDIVFRVTGRGRI-------GADGLAFWYTS 115
L V + G + F + + ADGLAF+
Sbjct: 34 LTAVAAGAPVPDSLGRALYAAPIHIHDNTTLASFTTSFSFVMAAPAAAAVADGLAFFLAP 93
Query: 116 EKGSYDGEVFGSSDRWKGLGLFFDS-FDNDNNHNNPYIMAVVNDGNMAFDHQNDGASQSL 174
+ G LGLF D D N + + H +
Sbjct: 94 P-DTQPQARGG------FLGLFADRAHDASYQTVAVEFDTYSNAWDPNYTHIGIDTNGIE 146
Query: 175 AGCLRDFRNKPY-PTRARIQYY--MNTLTVWFHNGMTNNEQDIEVCLRVENIYLPKEGYF 231
+ F I Y L ++ + + + + LP+
Sbjct: 147 SKKTTPFDMVYGEKANIVITYQASTKALAASLVFPVSQTSYAVSARVDLRD-ILPEYVRV 205
Query: 232 GVSAATG---GLADDHDILHF-LTSSL 254
G SA TG G+ + HDI+ + SL
Sbjct: 206 GFSATTGLNAGVVETHDIVSWSFAVSL 232
>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos
biflorus), different isoforms [TaxId: 3840]}
Length = 253
Score = 75.5 bits (185), Expect = 3e-16
Identities = 42/195 (21%), Positives = 65/195 (33%), Gaps = 29/195 (14%)
Query: 79 IWTKQTTNFEWWNVDIVFRVTGRGR-IGADGLAFWYTSEKGSYDGEVFGS---------S 128
I+ K T W + + ADG+AF GS G
Sbjct: 56 IYDKSTGAVASWATSFTANIFAPNKSSSADGIAFALVPV-GSEPKSNSGFLGVFDSDVYD 114
Query: 129 DRWKGLGLFFDSFDN-DNNHNNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPYP 187
+ + + + FD+F N D + + +I VN + +S+ N
Sbjct: 115 NSAQTVAVEFDTFSNTDWDPTSRHIGIDVN------------SIKSIRTASWGLANG-QN 161
Query: 188 TRARIQYYMNTLTVWFHNGMTNNEQDIEVCLRVE-NIYLPKEGYFGVSAATG---GLADD 243
I Y T + + V RV+ LP+ G SA TG G +
Sbjct: 162 AEILITYNAATSLLVASLVHPSRRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTET 221
Query: 244 HDILHFLTSSLLPPG 258
HD+L + +S LP
Sbjct: 222 HDVLSWSFASKLPDD 236
>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin
{Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Length = 204
Score = 71.7 bits (175), Expect = 3e-15
Identities = 30/206 (14%), Positives = 53/206 (25%), Gaps = 41/206 (19%)
Query: 55 YGGNCIASLENVRVAPSLRSQKGA--------IWTKQTTNFEWWNVDIVFRVTGRGR-IG 105
G ++S N++++ + I T N ++ + + +
Sbjct: 19 QGDATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTGNVASFDTNFTMNIRTHRQANS 78
Query: 106 ADGLAFWYTSEKGSYDGEVFGSSDRWKGLGLFFDSFDNDNNHNNPYIMAVVNDGNMAFDH 165
A GL F + G+ FD + + + H
Sbjct: 79 AVGLDFVLVPVQPESKGDTVT------------VEFDTFLSRISIDVNNNDIKSVPWDVH 126
Query: 166 QNDGASQSLAGCLRDFRNKPYPTRARIQYYMNTLTVWFHNGMTNNEQDIEVCLRVE-NIY 224
DG RI Y +T + + V VE
Sbjct: 127 DYDG----------------QNAEVRITYNSSTKVFSVSLSNPSTGKSNNVSTTVELEKE 170
Query: 225 LPKEGYFGVSAATGGLADD---HDIL 247
+ G SA +G HD+L
Sbjct: 171 VYDWVSVGFSATSGAYQWSYETHDVL 196
>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis,
leukoagglutinin [TaxId: 37501]}
Length = 239
Score = 71.7 bits (175), Expect = 5e-15
Identities = 35/189 (18%), Positives = 62/189 (32%), Gaps = 20/189 (10%)
Query: 79 IWTKQTTNFEWWNVDIVFRV-TGRGRIGADGLAFWYTSEKGSYDGEVFGSSDRWKGLGLF 137
IW T + ++ F V I +DGLAF+
Sbjct: 58 IWGNTTGSVASFSTSFTFVVKAPNPDITSDGLAFYLAPPDSQIPSGSVS------KYLGL 111
Query: 138 FDSFDNDNNHN------NPYIMAVVNDGNMAFDHQN-DGASQSLAGCLRDFRNKPYPTRA 190
F++ ++D+++ + Y + + + H D ++ A
Sbjct: 112 FNNSNSDSSNQIVAVEFDTYFAHSYDPWDPNYRHIGIDVNGIESIKTVQWDWINGGVAFA 171
Query: 191 RIQYYMNT--LTVWFHNGMTNNEQDIEVCLRVENIYLPKEGYFGVSAATGGLADD--HDI 246
I Y L + + ++ I LP+ G SAATG + HD+
Sbjct: 172 TITYLAPNKTLIASLVYPSNQTTFSVAASVDLKEI-LPEWVRVGFSAATGYPTEVETHDV 230
Query: 247 LHF-LTSSL 254
L + TS+L
Sbjct: 231 LSWSFTSTL 239
>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia
pseudoacacia) [TaxId: 35938]}
Length = 237
Score = 71.4 bits (174), Expect = 7e-15
Identities = 39/193 (20%), Positives = 65/193 (33%), Gaps = 29/193 (15%)
Query: 79 IWTKQTTNFEWWNVDIVFRVTG-RGRIGADGLAFWYTSEKGSYDGEVFGS---------S 128
IW T N + F + ADGLAF+ + ++ G +
Sbjct: 58 IWDSTTGNVASFVTSFTFIIQAPNPATTADGLAFFLAPV-DTQPLDLGGMLGIFKDGYFN 116
Query: 129 DRWKGLGLFFDSFDN-DNNHNNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPYP 187
+ + + FD+F N D + ++ VN + + +A +
Sbjct: 117 KSNQIVAVEFDTFSNGDWDPKGRHLGINVNSIESIKTVPWNWTNGEVANVFISYEASTKS 176
Query: 188 TRARIQYYMNTLTVWFHNGMTNNEQDIEVCLRVE-NIYLPKEGYFGVSAATG---GLADD 243
A + Y + E + V+ I LP+ FG SA TG G
Sbjct: 177 LTASLVY-------------PSLETSFIIDAIVDVKIVLPEWVRFGFSATTGIDKGYVQT 223
Query: 244 HDILHFLTSSLLP 256
+D+L + S LP
Sbjct: 224 NDVLSWSFESNLP 236
>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId:
3847]}
Length = 251
Score = 71.7 bits (175), Expect = 8e-15
Identities = 38/190 (20%), Positives = 59/190 (31%), Gaps = 22/190 (11%)
Query: 79 IWTKQTTNFEWWNVDIVFRVTG-RGRIGADGLAFWYTSEK------GSYDGEVFGSSDRW 131
IW K+T + + F + ADGLAF+ Y G +
Sbjct: 59 IWDKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQTHAGYLGLFNENESGD 118
Query: 132 KGLGLFFDSFDNDNNHNNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPYPTRAR 191
+ + + FD+F N + NP+I VN NK
Sbjct: 119 QVVAVEFDTFRNSWDPPNPHIGINVNSIRSIKTT-----------SWDLANNKVAKVLIT 167
Query: 192 IQYYMNTLTVWFHNGMTNNEQDIEVCLRVENIYLPKEGYFGVSAATGGLADD--HDILHF 249
+ L + + ++ LP+ G SAATG HD+L +
Sbjct: 168 YDASTSLLVASLVYPSQRTSNILSDVVDLKT-SLPEWVRIGFSAATGLDIPGESHDVLSW 226
Query: 250 -LTSSLLPPG 258
S+L
Sbjct: 227 SFASNLPHAS 236
>g1qmo.1 b.29.1.1 (A:,E:) Legume lectin {Field bean (Dolichos
lablab), Fril [TaxId: 35936]}
Length = 230
Score = 64.4 bits (156), Expect = 2e-12
Identities = 32/190 (16%), Positives = 61/190 (32%), Gaps = 34/190 (17%)
Query: 79 IWTKQTTNFEWWNVDIVFRVTGRGRIGADGLAFWYTSEK----GSYDGEVFGSSDRWKGL 134
+W + + T ADGLAF+ + +
Sbjct: 58 LWEDSAVLTSFDTIINFEISTPYTSRIADGLAFFIAPPDSVISYHGGFLGLFPNANSNVV 117
Query: 135 GLFFDSFDN------DNNHNNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPYPT 188
+ FD++ N + H + ++ + +D QN +
Sbjct: 118 AVEFDTYLNPDYGDPNYIHIGIDVNSIRSKVTAKWDWQNGKIAT---------------- 161
Query: 189 RARIQY--YMNTLTVWFHNGMTNNEQDIEVCLRVE-NIYLPKEGYFGVSAATGGLADDHD 245
A I Y L+V + + + +E + LP+ G+SA+TG + +
Sbjct: 162 -AHISYNSVSKRLSVTSYY---AGSKPATLSYDIELHTVLPEWVRVGLSASTGQDKERNT 217
Query: 246 ILHF-LTSSL 254
+ + TSSL
Sbjct: 218 VHSWSFTSSL 227
>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea)
[TaxId: 3818]}
Length = 232
Score = 55.5 bits (133), Expect = 2e-09
Identities = 40/192 (20%), Positives = 65/192 (33%), Gaps = 30/192 (15%)
Query: 79 IWTKQTTNFEWWNVDIVFRVTG-RGRIGADGLAFWYTSEK-----GSYDGEVFG---SSD 129
IW+ T N + F + + ADG+ F+ E GS G G +
Sbjct: 54 IWSSATGNVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKG 113
Query: 130 RWKGLGLFFDSFDNDNNHNNPYIMAVVNDGNMAFDHQ-NDGASQSLAGCLRDFRNKPYPT 188
+G+ FD++ N ++ P DH D S +
Sbjct: 114 AGHFVGVEFDTYSNSEYNDPPT------------DHVGIDVNSVDSVKTVPWNSVSGAVV 161
Query: 189 RARIQYY--MNTLTVWFHNGMTNNEQDIEVCLRVE-NIYLPKEGYFGVSAATGGLADD-H 244
+ + Y TL+V N + + V+ LP+ FG SA+ H
Sbjct: 162 KVTVIYDSSTKTLSVAVTNDNGDITT---IAQVVDLKAKLPERVKFGFSASGSLGGRQIH 218
Query: 245 DILHF-LTSSLL 255
I + TS+L+
Sbjct: 219 LIRSWSFTSTLI 230
>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume
(Griffonia simplicifolia) [TaxId: 3850]}
Length = 243
Score = 48.9 bits (116), Expect = 3e-07
Identities = 32/183 (17%), Positives = 52/183 (28%), Gaps = 23/183 (12%)
Query: 90 WNVDIVFRVTGRGRIGADGLAFWYTSEKGSYDGEVFGSSDRWKGLGLFFDSFDNDNNHNN 149
+ F + G ADGLAF+ S + LGLF D + N
Sbjct: 72 FYTSFTFLLKNYGAPTADGLAFFLAPVDSS-----VKDYGGF--LGLFRHETAADPSKNQ 124
Query: 150 PYIMAVVNDGNMAFDHQND-----------GASQSLAGCLRDFRNKPYPTRARIQYYMNT 198
+ N ++ + + + +
Sbjct: 125 VVAVEFDTWINKDWNDPPYPHIGIDVNSIVSVATTRWENDDAYGSSIATAHITYDARSKI 184
Query: 199 LTVWFHNGMTNNEQDIEVCLRVE-NIYLPKEGYFGVSAATGGLADDHDILHFLTSSLLPP 257
LTV + +D + V+ LP++ G SA G + IL + S L
Sbjct: 185 LTVLLS---YEHGRDYILSHVVDLAKVLPQKVRIGFSAGV-GYDEVTYILSWHFFSTLDG 240
Query: 258 GAK 260
K
Sbjct: 241 TNK 243
>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II
[TaxId: 3902]}
Length = 237
Score = 42.4 bits (99), Expect = 4e-05
Identities = 42/189 (22%), Positives = 65/189 (34%), Gaps = 21/189 (11%)
Query: 79 IWTKQTTNFEWWNVDIVFRVTGRGRIGADGLAFWYTSEKGSYDGEVFGSSDRWKGLGLFF 138
IW T + F V G DGLAF+ S G+ F
Sbjct: 56 IWDSITGKVASFATSFSFVVKADKSDGVDGLAFFLAPANS------QIPSGSSAGMFGLF 109
Query: 139 DSFDNDNNHN------NPYIMAVVNDGNMAFDHQ--NDGASQSLAGCLRDFRNKPYPTRA 190
S D+ +++ + Y N + F H + + +S+ D+RN
Sbjct: 110 SSSDSKSSNQIIAVEFDTYFGKAYNPWDPDFKHIGIDVNSIKSIKTVKWDWRNG-EVADV 168
Query: 191 RIQYY--MNTLTVWFHNGMTNNEQDIEVCLRVENIYLPKEGYFGVSAATGGLADD--HDI 246
I Y +LTV I + ++ LP+ G S G A+ HD+
Sbjct: 169 VITYRAPTKSLTVCLSYPSDGTSNIITASVDLKA-ILPEWVSVGFSGGVGNAAEFETHDV 227
Query: 247 LHF-LTSSL 254
L + TS+L
Sbjct: 228 LSWYFTSNL 236
>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia,
lectin I-b4 [TaxId: 3850]}
Length = 236
Score = 40.8 bits (95), Expect = 1e-04
Identities = 32/183 (17%), Positives = 55/183 (30%), Gaps = 25/183 (13%)
Query: 79 IWTKQTTNFEWWNVDIVFRVTGRGRIGADGLAFWYTSEKGSYDGEVFGSSDRWKGLGLFF 138
+W +T + + + F + G ADGLAF+ + + LGLF
Sbjct: 57 LWDNKTESVASFYTEFTFFLKITGNGPADGLAFFLAP-----PDSDVKDAGEY--LGLFN 109
Query: 139 DSFDNDNNHNNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPYPTRARIQYYMNT 198
S + N + N F + + K + + T
Sbjct: 110 KSTATQPSKNQVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVATKRWEDSDIFSGKIAT 169
Query: 199 LTVWFHNGMTNNEQDIEVCLRVENI-------------YLPKEGYFGVSAATGG-LADDH 244
+ + +G + V L + LP+ G+SA+TG
Sbjct: 170 ARISY-DGSAEI---LTVVLSYPDGSDYILSHSVDMRQNLPESVRVGISASTGNNQFLTV 225
Query: 245 DIL 247
IL
Sbjct: 226 YIL 228
>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina
crista-galli) [TaxId: 49817]}
Length = 239
Score = 40.0 bits (93), Expect = 3e-04
Identities = 41/194 (21%), Positives = 62/194 (31%), Gaps = 30/194 (15%)
Query: 79 IWTKQTTNFEWWNVDIVFRVT--GRGRIGADGLAFWYTSEK------GSYDGEVFGSSDR 130
+W T + F + + ADGL F+ K Y G S
Sbjct: 59 MWDSTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGYGYLGVFNNSKQD 118
Query: 131 WK--GLGLFFDSFDNDNN-HNNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPYP 187
L + FD+F N + P+I VN + +S+ N
Sbjct: 119 NSYQTLAVEFDTFSNPWDPPQVPHIGIDVN------------SIRSIKTQPFQLDNG-QV 165
Query: 188 TRARIQYY--MNTLTVWFHNGMTNNEQDIEVCLRVENIYLPKEGYFGVSAATGG---LAD 242
I+Y L V + I + V+ LP G+S ATG A+
Sbjct: 166 ANVVIKYDAPSKILHVVLVYPSSGAIYTIAEIVDVKQ-VLPDWVDVGLSGATGAQRDAAE 224
Query: 243 DHDILHFLTSSLLP 256
HD+ + + LP
Sbjct: 225 THDVYSWSFQASLP 238
>d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I
[TaxId: 3902]}
Length = 240
Score = 37.0 bits (85), Expect = 0.002
Identities = 34/192 (17%), Positives = 63/192 (32%), Gaps = 25/192 (13%)
Query: 79 IWTKQTTNFEWWNVDIVFRVT--GRGRIGADGLAFWYTSEK----------GSYDGEVFG 126
IW T + F + + DGL F+ G ++
Sbjct: 57 IWNCNTGELASFITSFSFFMETSANPKAATDGLTFFLAPPDSPLRRAGGYFGLFNDTKCD 116
Query: 127 SSDRWKGLGLFFDSFDNDNNHNNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPY 186
SS + + + FD+ + N +P + D N + ++ N
Sbjct: 117 SSYQ--TVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAERWNKRYGL------NNVA 168
Query: 187 PTRARIQYYMNTLTVWFHNGMTNNEQDIEVCLRVENI-YLPKEGYFGVSAATG-GLADDH 244
+ TLT +++ I V V+ LP+ G S +T G H
Sbjct: 169 NVEIIYEASSKTLTASLTY--PSDQTSISVTSIVDLKEILPEWVSVGFSGSTYIGRQATH 226
Query: 245 DILHF-LTSSLL 255
++L++ TS+ +
Sbjct: 227 EVLNWYFTSTFI 238
>d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus
tetragonolobus), acidic lectin [TaxId: 3891]}
Length = 234
Score = 35.1 bits (80), Expect = 0.010
Identities = 38/195 (19%), Positives = 61/195 (31%), Gaps = 37/195 (18%)
Query: 79 IWTKQTTNFEWWNVDIVFRVT--GRGRIGADGLAFWYTSEK------GSYDGEVFGSSDR 130
IW T N + F +T ADGL F+ G G
Sbjct: 58 IWDSTTGNVASFETRFSFNITQPYAYPEPADGLTFFMVPPNSPQGEDGGNLGVFKPPEGD 117
Query: 131 WKGLGLFFDSFDN----DNNHNNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPY 186
+ FD+F N H + ++V+ + F +N G +
Sbjct: 118 NA-FAVEFDTFQNTWDPQVPHIGIDVNSIVSSKTLHFQLENGGVAN-------------- 162
Query: 187 PTRARIQYY--MNTLTVWFHNGMTNNEQDIEVCLRVENIYLPKE-GYFGVSAATG---GL 240
I+Y L V + + ++ + E G+SA TG
Sbjct: 163 ---VVIKYDSPTKILNVVLAFHSVGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNA 219
Query: 241 ADDHDILHF-LTSSL 254
+ H+I+ + TSSL
Sbjct: 220 VETHEIISWSFTSSL 234
>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia
ensiformis) [TaxId: 3823]}
Length = 237
Score = 34.5 bits (79), Expect = 0.015
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 224 YLPKEGYFGVSAATGGLADDHDILHFLTSSLLPPGAKQQEQV 265
LP+ G+SA+TG + + IL + +S L + +
Sbjct: 84 VLPEWVRVGLSASTGLYKETNTILSWSFTSKLKSNSTHETNA 125
>d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus
tetragonolobus), basic agglutinin [TaxId: 3891]}
Length = 237
Score = 34.3 bits (78), Expect = 0.019
Identities = 44/194 (22%), Positives = 64/194 (32%), Gaps = 30/194 (15%)
Query: 79 IWTKQTTNFEWWNVDIVFRVT--GRGRIGADGLAFW------YTSEKGSYDGEVFGSSDR 130
+W T N + F + ADGL F+ T E G Y G S
Sbjct: 57 VWDSTTGNVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQTGEGGGYFGIYNPLSPY 116
Query: 131 WKGLGLFFDSFDNDNNHNNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPYPTRA 190
+ + FD+F N + P+I VN + S N
Sbjct: 117 PF-VAVEFDTFRNTWDPQIPHIGIDVN------------SVISTKTVPFTLDNG-GIANV 162
Query: 191 RIQYYMNTLTVWFHNGMTNNEQDIEVCLRVENI-YLPKEGYFGVSAATGG-------LAD 242
I+Y +T + + + V+ LP+ G SAATG +
Sbjct: 163 VIKYDASTKILHVVLVFPSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATE 222
Query: 243 DHDILHFLTSSLLP 256
HDIL + S+ LP
Sbjct: 223 THDILSWSFSASLP 236
>d1d4m1_ b.121.4.1 (1:) Human enterovirus B coat proteins {Human
coxsackievirus A9 [TaxId: 12067]}
Length = 284
Score = 30.2 bits (68), Expect = 0.36
Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
Query: 136 LFFDSFDNDNNHNNPYIMAVVND-GNMAFDHQNDGASQSLAGCLRDFRNKPYPTRA---- 190
F+D + N + Y +N+ G++ H + + + +R + KP TRA
Sbjct: 194 NFYDGWSNFDQR-GSYGYNTLNNLGHIYVRHVSGSSPHPITSTIRVY-FKPKHTRAWVPR 251
Query: 191 --RIQYYMNTLTVWFH-NGMTNNEQDI 214
R+ Y +V F +T+ +DI
Sbjct: 252 PPRLCQYKKAFSVDFTPTPITDTRKDI 278
>d1smyd_ e.29.1.2 (D:) RNA-polymerase beta-prime {Thermus thermophilus
[TaxId: 274]}
Length = 1504
Score = 28.6 bits (63), Expect = 1.9
Identities = 20/100 (20%), Positives = 35/100 (35%), Gaps = 15/100 (15%)
Query: 137 FFDSFDNDNNHNNPYIMAVVN-DGNMAFDHQNDGASQSLAGCLRDFRNKPYPTRARIQYY 195
F +F+ + N Y+MA GN Q L G R KP +
Sbjct: 1006 VFKNFEENYPFNPLYVMAQSGARGNPQQIRQ-------LCGL-RGLMQKPSGETFEVPVR 1057
Query: 196 MN-----TLTVWFHNGMTNNEQDIEVCLRV-ENIYLPKEG 229
+ T+ +F + + + LR ++ YL ++
Sbjct: 1058 SSFREGLTVLEYFISSHGARKGGADTALRTADSGYLTRKL 1097
>d1lwuc1 d.171.1.1 (C:138-399) Fibrinogen C-terminal domains {Sea
lamprey (Petromyzon marinus), gamma [TaxId: 7757]}
Length = 262
Score = 27.9 bits (61), Expect = 2.1
Identities = 29/167 (17%), Positives = 46/167 (27%), Gaps = 10/167 (5%)
Query: 18 YLVVLSSSQNPVERFEYKYSFKPPYLAQK--DGSVPFWEYGGNCIASLENVRVAPSLRSQ 75
Y + ++ P F + + Q DGSV F + + +
Sbjct: 31 YYIKPLKAKQPFLVFCEIENGNGWTVIQHRHDGSVNFTRDWVSYREGFGYLAPTLTTEFW 90
Query: 76 KGAIWTKQTTNFEWWNVDIVFRVTGRGRIGADGLAFWYTSEKGSYDGEVFGSSDRWKGLG 135
G T + + + I AD F T E Y D G
Sbjct: 91 LGNEKIHLLTGQQAYRLRIDLTDWENTHRYADYGHFKLTPESDEYRLFYSMYLDGDAG-- 148
Query: 136 LFFDSFDNDNNHNNPYIMAVVNDGNMAF---DHQNDGASQSLAGCLR 179
++FD + ++P M F + ND S A
Sbjct: 149 ---NAFDGFDFGDDPQDKFYTTHLGMLFSTPERDNDKYEGSCAEQDG 192
>d1x2na1 a.4.1.1 (A:6-67) Homeobox protein pknox1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 62
Score = 25.9 bits (57), Expect = 2.2
Identities = 9/43 (20%), Positives = 12/43 (27%), Gaps = 7/43 (16%)
Query: 170 ASQSLAGCLRDFRNKPYPTRARIQYYMNTL-------TVWFHN 205
A+ + L PYPT + WF N
Sbjct: 13 ATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFIN 55
>d1t61c2 d.169.1.6 (C:115-225) Noncollagenous (NC1) domain of
collagen IV {Cow (Bos taurus) [TaxId: 9913]}
Length = 111
Score = 26.7 bits (59), Expect = 2.4
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 7/49 (14%)
Query: 161 MAFDHQNDGASQSLA---GCLRDFRNKPY----PTRARIQYYMNTLTVW 202
M ++G QSL CL DFR P+ R YY N + W
Sbjct: 28 MHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYYANKYSFW 76
>d1owaa_ a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 156
Score = 27.0 bits (59), Expect = 2.6
Identities = 15/124 (12%), Positives = 42/124 (33%), Gaps = 9/124 (7%)
Query: 260 KQQEQVNQEDQKVAQEYAQYEKKLEEQK--QHSQNPVERFEYKYSFKPPYLAQKDGYQKD 317
+++++V Q + A+ +KLE+ Q + + K L K
Sbjct: 26 ERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVNILTDKSYEDPT 85
Query: 318 HPDA----HPNEEEWYESENQRELRQIFQGQSQLAE---WTKAIATGLDALQQKQDRILA 370
+ H + E +++++ + + + ++ L+ D +L
Sbjct: 86 NIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMGHSAHEETKAHIEELRHLWDLLLE 145
Query: 371 VVSQ 374
+ +
Sbjct: 146 LTLE 149
>d2q3za2 b.1.5.1 (A:472-585) Transglutaminase, two C-terminal
domains {Human (Homo sapiens), tissue isozyme [TaxId:
9606]}
Length = 114
Score = 26.6 bits (59), Expect = 2.7
Identities = 14/90 (15%), Positives = 24/90 (26%), Gaps = 20/90 (22%)
Query: 198 TLTVWFHNGMTNNEQDIEVCLRVENIYLPKEGYFGVSAATGGLADDHDILHFLTSSLLPP 257
+ N T E + L + Y G+ G ++ L P
Sbjct: 19 DVFAHITN-NTAEEYVCRLLLCARTVS-----YNGILGPECGTKYLLNLT-------LEP 65
Query: 258 GAKQQEQVNQEDQKVAQEYAQYEKKLEEQK 287
++ V + Y +Y L E
Sbjct: 66 F--SEKSVP-----LCILYEKYRDCLTESN 88
>d1vqoh1 d.41.4.1 (H:1-163) Ribosomal protein L10e {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 163
Score = 27.1 bits (60), Expect = 2.8
Identities = 8/39 (20%), Positives = 10/39 (25%)
Query: 175 AGCLRDFRNKPYPTRARIQYYMNTLTVWFHNGMTNNEQD 213
A RD Y R I + G + D
Sbjct: 3 ASMYRDIDKPAYTRREYITGIPGSKIAQHKMGRKQKDAD 41
>d9anta_ a.4.1.1 (A:) Antennapedia Homeodomain {Drosophila
melanogaster [TaxId: 7227]}
Length = 56
Score = 24.7 bits (54), Expect = 4.3
Identities = 9/34 (26%), Positives = 13/34 (38%), Gaps = 7/34 (20%)
Query: 179 RDFRNKPYPTRARIQYYMNTL-------TVWFHN 205
++F Y TR R + L +WF N
Sbjct: 14 KEFHFNRYLTRRRRIEIAHALSLTERQIKIWFQN 47
>d1le8a_ a.4.1.1 (A:) Mating type protein A1 Homeodomain {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 53
Score = 24.1 bits (52), Expect = 6.1
Identities = 7/34 (20%), Positives = 10/34 (29%), Gaps = 7/34 (20%)
Query: 179 RDFRNKPYPTRARIQYYMN-------TLTVWFHN 205
+ FR K + + VWF N
Sbjct: 14 QVFRRKQSLNSKEKEEVAKKCGITPLQVRVWFIN 47
>d1vema1 b.3.1.1 (A:418-516) beta-amylase {Bacillus cereus [TaxId:
1396]}
Length = 99
Score = 25.3 bits (55), Expect = 6.3
Identities = 7/29 (24%), Positives = 12/29 (41%), Gaps = 5/29 (17%)
Query: 30 ERFEYKYSFKPPYLAQKDGSVPFWEYGGN 58
E+K ++ KDG+V W+
Sbjct: 60 RNIEFKA-----FIKSKDGTVKSWQTIQQ 83
>d1t61a2 d.169.1.6 (A:115-225) Noncollagenous (NC1) domain of
collagen IV {Cow (Bos taurus) [TaxId: 9913]}
Length = 111
Score = 25.5 bits (56), Expect = 6.8
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Query: 161 MAFDHQNDGASQSL--AG-CLRDFRNKPYPT---RARIQYYMNTLTVW 202
M +G+ Q+L G CL +FR+ P+ R YY N + W
Sbjct: 31 MHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANAYSFW 78
>d2ebsa2 b.69.13.1 (A:431-786) Oligoxyloglucan reducing end-specific
cellobiohydrolase {Yeast (Geotrichum sp. M128) [TaxId:
203496]}
Length = 356
Score = 26.4 bits (57), Expect = 8.0
Identities = 13/107 (12%), Positives = 24/107 (22%), Gaps = 6/107 (5%)
Query: 77 GAIWTKQTTNFEWWNVDIVFRVTGRGRIGADGLAFWYTSEKGSYDGEVFGSSDRWKGLGL 136
G WT T N + A G ++++ + S D G
Sbjct: 96 GDAWTIFPTCPPGMNASHYQ--GSTIAVDASGSQIVWSTKLDEQASGPWYSHDY----GK 149
Query: 137 FFDSFDNDNNHNNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRN 183
+ D +++ + S G
Sbjct: 150 TWSVPAGDLKAQTANVLSDKVQDGTFYATDGGKFFVSTDGGKSYAAK 196
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.134 0.414
Gapped
Lambda K H
0.267 0.0507 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,589,277
Number of extensions: 74425
Number of successful extensions: 254
Number of sequences better than 10.0: 1
Number of HSP's gapped: 225
Number of HSP's successfully gapped: 40
Length of query: 413
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 325
Effective length of database: 1,199,356
Effective search space: 389790700
Effective search space used: 389790700
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.1 bits)