RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy11310
         (98 letters)



>d1k04a_ a.24.14.1 (A:) FAT domain of focal adhesion kinase {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 142

 Score =  100 bits (252), Expect = 1e-29
 Identities = 36/77 (46%), Positives = 49/77 (63%)

Query: 1   VQQNLTEHYLELVKRVGTELRNLLTSVDNLVVMFPPSAHKEIEIAHKVLSKDMGELVACM 60
           +Q    E Y+ +VK VG  LR LL +VD  + + P S H+EIE+A K+L+ D+GEL+  M
Sbjct: 35  IQPAPPEEYVPMVKEVGLALRTLLATVDETIPLLPASTHREIEMAQKLLNSDLGELINKM 94

Query: 61  KLAHTYSHTSLDNVYRK 77
           KLA  Y  TSL   Y+K
Sbjct: 95  KLAQQYVMTSLQQEYKK 111


>d1ixma_ d.123.1.1 (A:) Sporulation response regulatory protein
          Spo0B {Bacillus subtilis [TaxId: 1423]}
          Length = 179

 Score = 23.6 bits (49), Expect = 5.4
 Identities = 5/31 (16%), Positives = 11/31 (35%)

Query: 3  QNLTEHYLELVKRVGTELRNLLTSVDNLVVM 33
            LT   + L+     +  N L  +   + +
Sbjct: 3  TALTNELIHLLGHSRHDWMNKLQLIKGNLSL 33


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.321    0.133    0.370 

Gapped
Lambda     K      H
   0.267   0.0652    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 327,982
Number of extensions: 12233
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 24
Number of HSP's successfully gapped: 7
Length of query: 98
Length of database: 2,407,596
Length adjustment: 60
Effective length of query: 38
Effective length of database: 1,583,796
Effective search space: 60184248
Effective search space used: 60184248
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.0 bits)