Query psy11311
Match_columns 499
No_of_seqs 144 out of 283
Neff 3.4
Searched_HMMs 29240
Date Fri Aug 16 15:11:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11311.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11311hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ny3_A E3 ubiquitin-protein li 98.2 1.5E-06 5.2E-11 71.2 4.8 56 73-128 11-73 (75)
2 3nis_A E3 ubiquitin-protein li 98.0 5E-06 1.7E-10 69.3 4.8 63 61-128 8-79 (82)
3 3pbp_A Nucleoporin NUP82; beta 96.8 0.0076 2.6E-07 63.5 11.8 116 379-498 27-159 (452)
4 3f3f_A Nucleoporin SEH1; struc 96.7 0.034 1.2E-06 48.8 13.5 123 369-497 119-249 (351)
5 3k26_A Polycomb protein EED; W 96.6 0.026 9.1E-07 50.7 12.7 115 364-497 73-192 (366)
6 2xyi_A Probable histone-bindin 96.4 0.029 9.8E-07 54.2 12.3 120 375-497 141-263 (430)
7 3f3f_A Nucleoporin SEH1; struc 96.2 0.11 3.6E-06 45.6 13.4 119 365-497 16-143 (351)
8 1gxr_A ESG1, transducin-like e 96.1 0.13 4.3E-06 45.7 13.7 111 369-497 60-172 (337)
9 1r5m_A SIR4-interacting protei 96.0 0.075 2.5E-06 48.6 12.3 122 365-497 50-180 (425)
10 2oit_A Nucleoporin 214KDA; NH2 96.0 0.037 1.3E-06 55.0 11.0 121 374-497 47-181 (434)
11 3i2n_A WD repeat-containing pr 96.0 0.11 3.8E-06 46.6 12.9 111 369-497 177-291 (357)
12 3jrp_A Fusion protein of prote 96.0 0.12 4.2E-06 46.5 13.2 115 368-497 109-240 (379)
13 3i2n_A WD repeat-containing pr 95.9 0.13 4.3E-06 46.3 12.9 123 365-497 214-353 (357)
14 2pm9_A Protein WEB1, protein t 95.8 0.085 2.9E-06 48.8 11.6 115 369-497 174-294 (416)
15 3frx_A Guanine nucleotide-bind 95.7 0.12 4E-06 47.9 12.4 111 368-497 204-317 (319)
16 2pm9_A Protein WEB1, protein t 95.7 0.064 2.2E-06 49.6 10.4 118 369-497 122-249 (416)
17 1yfq_A Cell cycle arrest prote 95.7 0.2 6.7E-06 45.0 13.3 108 377-497 163-282 (342)
18 1pgu_A Actin interacting prote 95.6 0.11 3.7E-06 50.7 12.2 109 368-498 496-615 (615)
19 2xyi_A Probable histone-bindin 95.6 0.14 4.8E-06 49.4 13.0 115 368-497 285-410 (430)
20 3k26_A Polycomb protein EED; W 95.6 0.24 8.1E-06 44.5 13.5 118 365-497 23-147 (366)
21 3dw8_B Serine/threonine-protei 95.6 0.21 7.3E-06 46.7 13.6 118 369-497 186-315 (447)
22 2aq5_A Coronin-1A; WD40 repeat 95.6 0.12 4.1E-06 48.7 12.0 112 366-497 137-254 (402)
23 4g56_B MGC81050 protein; prote 95.3 0.24 8E-06 47.0 13.1 112 365-498 231-344 (357)
24 4a11_B DNA excision repair pro 95.3 0.3 1E-05 44.5 13.2 115 369-497 150-276 (408)
25 2vdu_B TRNA (guanine-N(7)-)-me 95.3 0.16 5.4E-06 49.1 11.9 118 365-497 107-229 (450)
26 3lrv_A PRE-mRNA-splicing facto 95.2 0.25 8.5E-06 45.8 12.7 116 364-498 129-245 (343)
27 3vu4_A KMHSV2; beta-propeller 95.1 0.23 8E-06 46.8 12.4 113 377-497 149-271 (355)
28 3zwl_B Eukaryotic translation 95.1 0.32 1.1E-05 43.5 12.5 106 368-498 40-152 (369)
29 3ei3_B DNA damage-binding prot 95.1 0.26 8.8E-06 45.7 12.3 111 368-496 81-193 (383)
30 1sq9_A Antiviral protein SKI8; 95.0 0.34 1.2E-05 44.5 12.8 112 366-497 192-322 (397)
31 3fm0_A Protein CIAO1; WDR39,SG 94.8 0.42 1.4E-05 44.6 13.1 109 369-497 25-136 (345)
32 4aow_A Guanine nucleotide-bind 94.8 0.33 1.1E-05 43.3 11.8 109 369-497 224-337 (340)
33 1l0q_A Surface layer protein; 94.8 0.33 1.1E-05 44.8 12.1 101 375-497 2-105 (391)
34 1k8k_C P40, ARP2/3 complex 41 94.7 0.43 1.5E-05 43.2 12.5 110 369-497 105-233 (372)
35 1k8k_C P40, ARP2/3 complex 41 94.7 0.34 1.2E-05 43.8 11.9 109 369-497 17-127 (372)
36 4aez_A CDC20, WD repeat-contai 94.7 0.2 6.8E-06 47.5 10.8 109 369-497 268-380 (401)
37 3ei3_B DNA damage-binding prot 94.7 0.31 1.1E-05 45.2 11.8 104 376-497 132-236 (383)
38 2oit_A Nucleoporin 214KDA; NH2 94.7 0.28 9.5E-06 48.7 12.3 111 369-497 158-278 (434)
39 1xip_A Nucleoporin NUP159; bet 94.6 0.21 7.1E-06 50.7 11.2 114 361-497 40-155 (388)
40 3jrp_A Fusion protein of prote 94.5 0.53 1.8E-05 42.4 12.5 110 376-497 173-287 (379)
41 2aq5_A Coronin-1A; WD40 repeat 94.4 0.68 2.3E-05 43.6 13.6 110 376-497 95-207 (402)
42 3mmy_A MRNA export factor; mRN 94.4 0.54 1.8E-05 42.0 12.2 114 365-497 44-160 (368)
43 4g56_B MGC81050 protein; prote 94.4 0.29 9.8E-06 46.4 11.1 110 369-497 190-301 (357)
44 4gqb_B Methylosome protein 50; 94.3 0.46 1.6E-05 45.3 12.4 111 368-497 177-289 (344)
45 1ri6_A Putative isomerase YBHE 94.3 0.18 6.3E-06 44.9 8.9 110 369-497 46-160 (343)
46 1l0q_A Surface layer protein; 94.3 0.53 1.8E-05 43.4 12.3 110 365-497 36-147 (391)
47 3zwl_B Eukaryotic translation 94.3 1 3.5E-05 40.2 13.7 110 369-497 83-206 (369)
48 2pm7_B Protein transport prote 94.2 0.96 3.3E-05 41.2 13.8 115 368-497 107-238 (297)
49 3dwl_C Actin-related protein 2 94.2 0.51 1.8E-05 43.3 12.0 116 365-497 105-236 (377)
50 4ggc_A P55CDC, cell division c 94.2 0.61 2.1E-05 41.2 12.0 109 369-497 205-315 (318)
51 1ri6_A Putative isomerase YBHE 94.2 0.41 1.4E-05 42.6 10.9 114 369-497 92-209 (343)
52 4aez_A CDC20, WD repeat-contai 94.1 0.45 1.5E-05 45.0 11.7 101 377-497 231-336 (401)
53 1gxr_A ESG1, transducin-like e 94.1 0.79 2.7E-05 40.5 12.5 105 369-498 192-297 (337)
54 1sq9_A Antiviral protein SKI8; 94.0 0.67 2.3E-05 42.6 12.4 118 369-497 242-395 (397)
55 1got_B GT-beta; complex (GTP-b 94.0 0.73 2.5E-05 42.8 12.7 109 369-497 64-173 (340)
56 3dw8_B Serine/threonine-protei 93.9 0.35 1.2E-05 45.2 10.4 78 416-497 176-258 (447)
57 2hes_X YDR267CP; beta-propelle 93.9 0.76 2.6E-05 42.6 12.6 116 368-497 66-184 (330)
58 1erj_A Transcriptional repress 93.9 0.58 2E-05 44.5 12.1 121 365-497 69-196 (393)
59 4e54_B DNA damage-binding prot 93.9 0.36 1.2E-05 46.5 10.7 110 369-496 128-239 (435)
60 4gga_A P55CDC, cell division c 93.8 0.61 2.1E-05 44.6 12.0 107 369-497 285-395 (420)
61 4e54_B DNA damage-binding prot 93.7 0.43 1.5E-05 45.9 11.0 104 376-497 222-327 (435)
62 3odt_A Protein DOA1; ubiquitin 93.7 0.71 2.4E-05 40.5 11.4 103 369-497 193-296 (313)
63 1yfq_A Cell cycle arrest prote 93.5 0.82 2.8E-05 41.0 11.7 110 377-498 114-226 (342)
64 3u4y_A Uncharacterized protein 93.5 0.44 1.5E-05 42.9 10.0 114 369-497 184-304 (331)
65 3hfq_A Uncharacterized protein 93.5 0.63 2.1E-05 42.6 11.2 115 368-496 148-270 (347)
66 4gqb_B Methylosome protein 50; 93.5 1 3.4E-05 43.0 12.9 109 369-498 223-332 (344)
67 3fm0_A Protein CIAO1; WDR39,SG 93.4 1.1 3.9E-05 41.7 13.0 111 368-497 69-181 (345)
68 3odt_A Protein DOA1; ubiquitin 93.3 0.92 3.1E-05 39.8 11.5 99 377-497 116-214 (313)
69 3mkq_A Coatomer beta'-subunit; 93.3 0.73 2.5E-05 47.1 12.3 105 369-497 22-128 (814)
70 2j04_A TAU60, YPL007P, hypothe 93.2 0.64 2.2E-05 50.3 12.3 120 360-497 85-211 (588)
71 3mmy_A MRNA export factor; mRN 93.2 0.48 1.7E-05 42.3 9.6 75 417-497 39-117 (368)
72 4a11_B DNA excision repair pro 93.1 1.8 6E-05 39.5 13.4 113 377-497 58-175 (408)
73 2pbi_B Guanine nucleotide-bind 93.1 0.87 3E-05 42.9 11.8 116 365-497 69-185 (354)
74 3iz6_a 40S ribosomal protein R 93.1 0.9 3.1E-05 43.0 11.9 117 365-497 162-280 (380)
75 3gre_A Serine/threonine-protei 93.0 1.1 3.8E-05 42.3 12.4 105 376-497 183-292 (437)
76 4ery_A WD repeat-containing pr 93.0 2.3 8E-05 38.2 14.0 111 365-497 112-223 (312)
77 2xzm_R RACK1; ribosome, transl 93.0 1.9 6.7E-05 39.9 13.8 99 377-497 186-285 (343)
78 3ow8_A WD repeat-containing pr 93.0 0.88 3E-05 42.4 11.4 109 366-497 170-279 (321)
79 2xzm_R RACK1; ribosome, transl 92.9 1.6 5.3E-05 40.5 13.0 110 368-496 221-339 (343)
80 3iz6_a 40S ribosomal protein R 92.9 0.36 1.2E-05 45.7 8.9 113 368-497 74-189 (380)
81 3vl1_A 26S proteasome regulato 92.9 1.5 5.1E-05 40.7 12.8 106 368-497 105-212 (420)
82 3u4y_A Uncharacterized protein 92.9 1.3 4.5E-05 39.8 12.1 108 369-497 92-207 (331)
83 2ymu_A WD-40 repeat protein; u 92.8 1.2 4.2E-05 43.4 12.6 103 369-496 25-128 (577)
84 3vl1_A 26S proteasome regulato 92.8 0.78 2.7E-05 42.7 10.8 108 369-497 256-365 (420)
85 1erj_A Transcriptional repress 92.6 1.6 5.4E-05 41.5 12.8 110 369-497 174-287 (393)
86 3ow8_A WD repeat-containing pr 92.4 1.4 4.7E-05 41.0 12.0 105 369-497 131-237 (321)
87 1got_B GT-beta; complex (GTP-b 92.3 1.8 6.2E-05 40.2 12.6 104 369-494 235-340 (340)
88 3jro_A Fusion protein of prote 92.3 1.3 4.5E-05 46.8 12.9 119 365-497 104-238 (753)
89 2ynn_A Coatomer subunit beta'; 92.2 2.1 7.2E-05 39.0 12.8 110 368-497 105-217 (304)
90 3dm0_A Maltose-binding peripla 92.2 1.2 4.2E-05 45.7 12.3 113 366-497 567-693 (694)
91 3scy_A Hypothetical bacterial 92.2 2.9 9.9E-05 38.5 13.7 120 368-496 162-290 (361)
92 1r5m_A SIR4-interacting protei 92.1 1.6 5.5E-05 39.8 11.7 103 369-496 256-360 (425)
93 2ymu_A WD-40 repeat protein; u 92.0 1.8 6E-05 42.3 12.6 102 368-494 475-577 (577)
94 3dwl_C Actin-related protein 2 92.0 1.1 3.8E-05 41.1 10.6 112 368-496 63-176 (377)
95 1nr0_A Actin interacting prote 91.9 1.5 5E-05 44.8 12.3 110 366-497 454-567 (611)
96 4h5i_A Guanine nucleotide-exch 91.7 1.6 5.6E-05 41.4 11.8 71 419-497 271-343 (365)
97 3gre_A Serine/threonine-protei 91.5 2.2 7.6E-05 40.2 12.4 115 377-497 125-245 (437)
98 1nir_A Nitrite reductase; hemo 91.5 1.5 5E-05 45.1 12.0 118 365-497 183-311 (543)
99 4ery_A WD repeat-containing pr 91.4 3.1 0.00011 37.3 12.8 106 369-497 32-138 (312)
100 1pby_B Quinohemoprotein amine 91.3 0.66 2.2E-05 41.2 8.1 105 377-497 3-124 (337)
101 3bws_A Protein LP49; two-domai 91.3 2.1 7.3E-05 40.0 11.9 105 369-497 311-432 (433)
102 3scy_A Hypothetical bacterial 91.0 2.9 9.9E-05 38.5 12.4 111 369-497 219-337 (361)
103 3hfq_A Uncharacterized protein 90.9 2.5 8.7E-05 38.6 11.8 113 369-497 195-317 (347)
104 2pm7_B Protein transport prote 90.9 3.7 0.00013 37.3 12.8 109 377-497 172-285 (297)
105 3vgz_A Uncharacterized protein 90.7 3.3 0.00011 37.2 12.1 108 369-497 193-303 (353)
106 3sfz_A APAF-1, apoptotic pepti 90.6 1.8 6.2E-05 47.1 12.1 112 364-497 661-774 (1249)
107 2ynn_A Coatomer subunit beta'; 90.5 4.4 0.00015 36.9 13.0 113 364-497 144-259 (304)
108 1pgu_A Actin interacting prote 90.1 3.4 0.00011 40.2 12.5 103 377-497 458-572 (615)
109 1jmx_B Amine dehydrogenase; ox 90.0 1.5 5.1E-05 39.2 9.2 108 376-497 12-134 (349)
110 2vdu_B TRNA (guanine-N(7)-)-me 89.6 3.9 0.00013 39.4 12.5 115 376-498 253-392 (450)
111 2pbi_B Guanine nucleotide-bind 89.6 3.4 0.00012 38.8 11.8 104 369-494 249-354 (354)
112 4aow_A Guanine nucleotide-bind 89.3 3.6 0.00012 36.6 11.1 105 375-497 141-246 (340)
113 1vyh_C Platelet-activating fac 89.2 3.4 0.00012 39.7 11.7 109 366-497 114-223 (410)
114 2hes_X YDR267CP; beta-propelle 89.1 3.8 0.00013 37.9 11.5 107 377-496 26-137 (330)
115 4h5i_A Guanine nucleotide-exch 89.0 2.9 9.9E-05 39.7 10.9 105 369-496 142-253 (365)
116 4ggc_A P55CDC, cell division c 88.8 2.4 8.1E-05 37.4 9.5 73 415-497 11-98 (318)
117 3bws_A Protein LP49; two-domai 88.8 6.3 0.00022 36.8 12.9 105 368-497 261-390 (433)
118 2ojh_A Uncharacterized protein 88.8 8.5 0.00029 32.9 12.7 108 369-497 137-258 (297)
119 2oaj_A Protein SNI1; WD40 repe 88.7 2.2 7.5E-05 46.7 11.1 121 365-497 103-242 (902)
120 4gga_A P55CDC, cell division c 88.2 6.8 0.00023 37.3 13.0 105 377-497 244-353 (420)
121 2ovr_B FBW7, F-BOX/WD repeat p 88.1 5.9 0.0002 37.7 12.4 107 377-498 331-443 (445)
122 2j04_A TAU60, YPL007P, hypothe 88.1 2.7 9.1E-05 45.6 11.1 115 369-497 138-254 (588)
123 3sfz_A APAF-1, apoptotic pepti 87.7 5.6 0.00019 43.3 13.4 110 365-497 620-732 (1249)
124 3jro_A Fusion protein of prote 87.5 3.1 0.0001 44.0 11.0 113 368-498 17-133 (753)
125 1nr0_A Actin interacting prote 87.5 8.2 0.00028 39.3 13.7 111 366-496 497-610 (611)
126 3vgz_A Uncharacterized protein 87.0 4.1 0.00014 36.6 10.1 75 420-497 91-173 (353)
127 3mkq_A Coatomer beta'-subunit; 86.7 5.2 0.00018 40.9 11.8 102 377-497 155-259 (814)
128 3lrv_A PRE-mRNA-splicing facto 85.9 5.2 0.00018 36.9 10.4 72 419-497 127-201 (343)
129 4gq1_A NUP37; propeller, trans 85.9 3.8 0.00013 39.1 9.7 75 420-497 91-175 (393)
130 3frx_A Guanine nucleotide-bind 84.9 3.7 0.00013 37.8 8.9 78 418-497 18-96 (319)
131 1jmx_B Amine dehydrogenase; ox 84.7 8.9 0.0003 34.2 11.0 73 368-459 99-184 (349)
132 1vyh_C Platelet-activating fac 84.1 9.3 0.00032 36.6 11.6 103 376-497 247-369 (410)
133 3dm0_A Maltose-binding peripla 83.2 4.7 0.00016 41.5 9.6 78 417-497 382-461 (694)
134 2ecf_A Dipeptidyl peptidase IV 83.1 13 0.00043 38.0 12.6 71 418-497 109-181 (741)
135 1jof_A Carboxy-CIS,CIS-muconat 82.7 20 0.0007 33.5 13.1 74 418-496 145-223 (365)
136 2oaj_A Protein SNI1; WD40 repe 81.8 12 0.00039 41.1 12.5 103 368-497 25-129 (902)
137 1pby_B Quinohemoprotein amine 81.6 7.2 0.00025 34.5 9.1 111 369-497 42-163 (337)
138 1nir_A Nitrite reductase; hemo 81.2 12 0.00041 38.4 11.8 99 376-497 150-257 (543)
139 1jof_A Carboxy-CIS,CIS-muconat 80.6 7.8 0.00027 36.3 9.4 111 369-496 48-175 (365)
140 3vu4_A KMHSV2; beta-propeller 80.5 14 0.00049 34.6 11.2 102 368-498 27-129 (355)
141 2hqs_A Protein TOLB; TOLB, PAL 79.5 33 0.0011 33.2 13.7 111 364-497 182-300 (415)
142 2ojh_A Uncharacterized protein 77.6 23 0.00077 30.2 10.6 106 368-496 49-159 (297)
143 1qks_A Cytochrome CD1 nitrite 77.6 20 0.00069 37.6 12.3 69 365-447 201-272 (567)
144 2yvr_A Transcription intermedi 77.2 1.4 4.9E-05 31.8 2.5 31 75-109 15-45 (50)
145 4gq1_A NUP37; propeller, trans 76.8 9.6 0.00033 36.3 8.9 69 421-496 319-388 (393)
146 3v7d_B Cell division control p 76.6 24 0.00083 33.4 11.5 101 377-498 134-237 (464)
147 2z3z_A Dipeptidyl aminopeptida 76.5 19 0.00065 36.6 11.4 73 420-497 183-293 (706)
148 2hqs_A Protein TOLB; TOLB, PAL 76.4 34 0.0012 33.1 12.8 72 418-497 267-344 (415)
149 3v7d_B Cell division control p 74.9 18 0.00063 34.2 10.2 98 375-496 363-464 (464)
150 3bg1_A Protein SEC13 homolog; 74.5 26 0.00089 32.0 10.9 111 369-497 22-136 (316)
151 2d8u_A Ubiquitin ligase TRIM63 72.2 1.5 5.1E-05 33.0 1.6 30 76-109 18-48 (64)
152 2did_A Tripartite motif protei 71.7 2.3 7.9E-05 31.1 2.5 32 75-110 16-48 (53)
153 2csv_A Tripartite motif protei 71.1 2.5 8.4E-05 32.8 2.7 31 75-109 26-56 (72)
154 2dja_A Midline-2; tripartite m 70.3 1.7 5.8E-05 34.4 1.6 31 75-109 27-58 (84)
155 3ddt_A E3 ubiquitin-protein li 69.2 2.8 9.7E-05 30.1 2.5 28 78-109 18-46 (48)
156 3bg1_A Protein SEC13 homolog; 68.0 19 0.00066 32.9 8.4 106 377-497 181-293 (316)
157 1p22_A F-BOX/WD-repeat protein 65.3 58 0.002 30.9 11.4 100 376-497 184-285 (435)
158 2j04_B YDR362CP, TAU91; beta p 63.7 50 0.0017 33.9 11.4 103 378-497 280-386 (524)
159 2z3z_A Dipeptidyl aminopeptida 63.7 65 0.0022 32.7 12.0 106 369-497 318-435 (706)
160 2yrg_A Tripartite motif-contai 63.3 4.2 0.00014 30.7 2.5 41 59-109 12-53 (59)
161 2egm_A Tripartite motif-contai 62.9 3.3 0.00011 31.2 1.8 29 75-107 26-55 (57)
162 1xfd_A DIP, dipeptidyl aminope 62.7 57 0.002 33.0 11.4 31 466-497 254-289 (723)
163 3azo_A Aminopeptidase; POP fam 58.0 76 0.0026 31.9 11.3 74 416-496 128-225 (662)
164 1q7f_A NHL, brain tumor CG1071 57.6 1E+02 0.0034 27.2 13.4 104 376-498 176-281 (286)
165 2j04_B YDR362CP, TAU91; beta p 56.2 42 0.0014 34.5 9.2 76 419-497 209-296 (524)
166 3o4h_A Acylamino-acid-releasin 54.7 1.2E+02 0.0041 30.1 12.0 109 364-497 25-141 (582)
167 1qks_A Cytochrome CD1 nitrite 54.6 94 0.0032 32.5 11.7 99 376-496 168-274 (567)
168 1fre_A Nuclear factor XNF7; zi 53.9 2.6 8.9E-05 29.3 -0.1 28 76-107 12-40 (42)
169 1xfd_A DIP, dipeptidyl aminope 53.1 33 0.0011 34.7 7.8 130 349-497 6-143 (723)
170 2ecf_A Dipeptidyl peptidase IV 53.0 34 0.0012 34.8 7.9 92 403-497 20-138 (741)
171 2oiz_A Aromatic amine dehydrog 52.7 1.6E+02 0.0054 28.0 12.2 78 416-497 49-140 (361)
172 1p22_A F-BOX/WD-repeat protein 48.9 1.6E+02 0.0055 27.9 11.4 96 377-497 145-242 (435)
173 3dsm_A Uncharacterized protein 48.4 1.2E+02 0.004 28.2 10.2 105 375-497 54-161 (328)
174 2ece_A 462AA long hypothetical 46.9 1.1E+02 0.0038 32.2 10.8 118 364-497 85-237 (462)
175 3pe7_A Oligogalacturonate lyas 46.7 51 0.0017 30.1 7.3 75 418-497 188-273 (388)
176 2ovr_B FBW7, F-BOX/WD repeat p 46.2 53 0.0018 31.1 7.6 65 377-449 374-443 (445)
177 1z68_A Fibroblast activation p 43.9 65 0.0022 32.8 8.3 108 369-497 24-139 (719)
178 3no2_A Uncharacterized protein 42.7 1.9E+02 0.0065 26.5 10.7 99 375-497 5-106 (276)
179 2gop_A Trilobed protease; beta 42.2 1.9E+02 0.0065 25.9 11.0 65 420-495 106-205 (347)
180 3qqz_A Putative uncharacterize 41.0 35 0.0012 32.6 5.4 85 373-462 131-215 (255)
181 3dsm_A Uncharacterized protein 40.9 1.9E+02 0.0065 26.8 10.4 101 375-497 141-253 (328)
182 2jun_A Midline-1; B-BOX, TRIM, 40.7 11 0.00039 30.2 1.7 28 77-108 70-98 (101)
183 1k32_A Tricorn protease; prote 40.2 2.2E+02 0.0075 31.1 12.2 102 369-497 304-409 (1045)
184 1xip_A Nucleoporin NUP159; bet 38.6 73 0.0025 32.2 7.6 54 420-477 165-224 (388)
185 1z68_A Fibroblast activation p 38.5 1.1E+02 0.0039 31.0 9.1 60 420-488 112-189 (719)
186 3sjl_D Methylamine dehydrogena 37.3 2E+02 0.0067 29.1 10.6 107 369-497 145-256 (386)
187 2w18_A PALB2, fancn, partner a 36.5 1.5E+02 0.0051 30.2 9.5 56 438-497 156-212 (356)
188 3fvz_A Peptidyl-glycine alpha- 36.5 2.5E+02 0.0087 25.7 12.0 76 419-496 144-226 (329)
189 2dg1_A DRP35, lactonase; beta 32.8 2.7E+02 0.0092 24.9 12.1 102 376-496 57-168 (333)
190 2xdw_A Prolyl endopeptidase; a 30.9 3.2E+02 0.011 28.2 11.1 75 420-497 173-268 (710)
191 3fvz_A Peptidyl-glycine alpha- 28.9 2.2E+02 0.0075 26.1 8.6 106 375-497 208-322 (329)
192 1q7f_A NHL, brain tumor CG1071 28.9 2.9E+02 0.01 24.1 12.5 106 376-496 42-150 (286)
193 3c5m_A Oligogalacturonate lyas 28.6 1.4E+02 0.0047 27.1 7.0 76 417-497 187-273 (396)
194 3c75_H MADH, methylamine dehyd 27.2 3.1E+02 0.011 27.9 10.1 111 367-497 79-209 (426)
195 2mad_H Methylamine dehydrogena 27.0 3.9E+02 0.013 25.8 10.4 110 367-497 27-156 (373)
196 2gop_A Trilobed protease; beta 26.9 2.2E+02 0.0074 25.5 8.0 59 419-486 60-122 (347)
197 3nok_A Glutaminyl cyclase; bet 26.5 2.1E+02 0.0072 27.9 8.4 104 375-496 106-209 (268)
198 1rwi_B Serine/threonine-protei 25.4 3.2E+02 0.011 23.4 10.7 101 376-497 162-264 (270)
199 2iwa_A Glutamine cyclotransfer 25.4 3.1E+02 0.01 26.2 9.2 106 375-497 76-181 (266)
200 1k32_A Tricorn protease; prote 24.1 4.4E+02 0.015 28.8 11.1 72 417-497 378-461 (1045)
201 3v2d_D 50S ribosomal protein L 23.6 1.8E+02 0.0063 29.0 7.4 89 404-492 63-165 (276)
202 3qqz_A Putative uncharacterize 22.7 4E+02 0.014 25.2 9.3 41 418-460 27-67 (255)
203 3sjl_D Methylamine dehydrogena 22.6 5.4E+02 0.018 25.9 10.8 118 361-497 33-169 (386)
204 2kwq_A Protein MCM10 homolog; 22.4 37 0.0013 28.8 1.9 43 75-121 12-56 (92)
205 1yr2_A Prolyl oligopeptidase; 21.4 5E+02 0.017 27.0 10.6 72 421-496 212-302 (741)
206 3mbr_X Glutamine cyclotransfer 20.3 4.6E+02 0.016 25.0 9.2 106 374-495 114-231 (243)
No 1
>3ny3_A E3 ubiquitin-protein ligase UBR2; zinc finger-like, ubiquitin ligase, protein binding, lygase,; 1.60A {Homo sapiens} PDB: 3ny2_A 3ny1_A
Probab=98.17 E-value=1.5e-06 Score=71.22 Aligned_cols=56 Identities=29% Similarity=0.624 Sum_probs=46.1
Q ss_pred cc-ccceeeccCCCCCCCceeehhhhhh-hcCCCeEEEee-cCceEeeCCCCC----CCccee
Q psy11311 73 FM-NQHWYHCHTCKMIDGVGVCSVCAQV-CHKNHDITYSK-FGNFFCDCGAKE----NGQCLA 128 (499)
Q Consensus 73 ~i-rQ~~Y~C~TC~~~~~~gIC~aCA~v-CH~GHdLvy~K-~r~F~CDCG~~k----~~~Ckl 128 (499)
+. ....|+|+||..++.-.+|..|... -|+||++.+.. ...+.||||... .+.|+.
T Consensus 11 f~~ge~~Y~C~~C~~d~tc~lC~~CF~~~~H~gH~~~~~~s~~gG~CDCGD~eawk~~~fC~~ 73 (75)
T 3ny3_A 11 FKVGEPTYSCRDCAVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYCQK 73 (75)
T ss_dssp CCTTCEEEEETTTBSSTTCCBCHHHHHTSGGGGSCEEEEECCSCBBCCTTCTTTBSSCCSCTT
T ss_pred ccCCCEEEECccCCCCCCeeEChHHCCCCCcCCceEEEEEcCCCCEecCcCHHHcCCCCCCCC
Confidence 43 6679999999999999999999965 99999997443 467899999986 566754
No 2
>3nis_A E3 ubiquitin-protein ligase UBR1; E3 ubiquitin ligase, UBR BOX, zinc-binding protein, N-END RU ligase, metal binding protein; 1.68A {Saccharomyces cerevisiae} PDB: 3nii_A 3nij_A 3nih_A 3nik_A 3nim_A 3nin_A 3nil_A 3nit_A
Probab=98.00 E-value=5e-06 Score=69.28 Aligned_cols=63 Identities=32% Similarity=0.654 Sum_probs=49.8
Q ss_pred CCCccccccccccc-ccceeeccCCCCCCCceeehhhhhh-hcCCCeEEEee---cCceEeeCCCCC----CCccee
Q psy11311 61 NKLCTYTITQKEFM-NQHWYHCHTCKMIDGVGVCSVCAQV-CHKNHDITYSK---FGNFFCDCGAKE----NGQCLA 128 (499)
Q Consensus 61 ~~~CTf~~TG~~~i-rQ~~Y~C~TC~~~~~~gIC~aCA~v-CH~GHdLvy~K---~r~F~CDCG~~k----~~~Ckl 128 (499)
...|... +. ...+|+|+||.+++.-.||..|... =|+||++.+.. .....||||... .+.|+.
T Consensus 8 g~~Cg~v-----f~~ge~~Y~C~~C~~d~tcvlC~~CF~~s~H~gH~~~~~~s~~~~gG~CDCGD~eawk~~~fC~~ 79 (82)
T 3nis_A 8 GRNCGRK-----FKIGEPLYRCHECGCDDTCVLCIHCFNPKDHVNHHVCTDICTEFTSGICDCGDEEAWNSPLHCKA 79 (82)
T ss_dssp TSCCCCB-----CCTTCEEEEETTTBSSTTCCBCTTTCCGGGGTTSCEEEEECCSSEEEBCCTTCGGGBSSCCCCGG
T ss_pred CCCCCCc-----ccCCCEEEEeeccCCCCCceEchhhCCCCCcCCceEEEEEecCCCCcEecCCCHHHhCCCCCCCC
Confidence 4556555 43 5679999999999999999999954 89999998544 257899999985 667764
No 3
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.80 E-value=0.0076 Score=63.45 Aligned_cols=116 Identities=16% Similarity=0.218 Sum_probs=79.1
Q ss_pred EEeecCCeEEEeehhhhcccccccccccccccccccc-cce-eEEEeeecCCCcceeeeeccceeEEEEecCCCCcccc-
Q psy11311 379 AVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVS-LPI-TILSVEANPCNEELLAVCGLKECIVFSFTSGMSQATD- 455 (499)
Q Consensus 379 AVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~-VpF-~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~~G~~v~d- 455 (499)
.|++.+.+|-+.+= ..|.=++..+. .+-+-|-... ++| +|.+|..||-. +||||.|-++++|+.+.+... ..+
T Consensus 27 ~~~~n~t~i~~a~~-n~iR~~~i~~~-~~Yk~L~~~~~i~f~~i~qlvlSpsG-~lLAl~g~~~V~Vv~LP~~~~-~~~~ 102 (452)
T 3pbp_A 27 FSSQNGTRIVFIQD-NIIRWYNVLTD-SLYHSLNFSRHLVLDDTFHVISSTSG-DLLCLFNDNEIFVMEVPWGYS-NVED 102 (452)
T ss_dssp EEETTTTEEEEEET-TEEEEEETTTC-SSCEEEECTTTCCCCTTCEEEECTTS-SEEEEECSSEEEEEECCTTCS-CCCC
T ss_pred EEEcCCCEEEEEEC-CEEEEEECCCC-CcceEEecCcccccCceeEEEECCCC-CEEEEecCCeEEEEEecCccc-cCcc
Confidence 45677777766654 55554333321 1333333332 688 89999999976 999999999999999996433 333
Q ss_pred ----------eeeeccccC-CCceeEeeEEecCCCc--eEEEeecC-ceEEeecCCC
Q psy11311 456 ----------SITINPHCE-TSNYIIKALWIPGRQS--TLAIVTAL-NIKIYQLRPE 498 (499)
Q Consensus 456 ----------~l~i~l~l~-~~~fIik~~Wipgsq~--~LAVvT~~-fVKIYDLs~d 498 (499)
...|.+..- ...=|.+|.|=|-+.. .|.|+|++ -|++||++++
T Consensus 103 ~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s 159 (452)
T 3pbp_A 103 VSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNS 159 (452)
T ss_dssp HHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCT
T ss_pred cccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccC
Confidence 233333210 1355999999999876 78888887 6999999873
No 4
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.71 E-value=0.034 Score=48.81 Aligned_cols=123 Identities=15% Similarity=0.196 Sum_probs=77.3
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccc-cccccccccccccccceeEEEeeecCC--CcceeeeeccceeEEEE
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDS-SKRKLTLIKLASVSLPITILSVEANPC--NEELLAVCGLKECIVFS 445 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqads-s~~Kltl~rLs~~~VpF~Vlsl~~NP~--ne~~LAV~GlkeC~Vlt 445 (499)
+|......| |++...|.|.|.++..--....- .........+....-...|..++++|. +.++||+++.....++.
T Consensus 119 ~~~~~~~~l-~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~ 197 (351)
T 3f3f_A 119 APAHLGLKL-ACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQ 197 (351)
T ss_dssp CCGGGCSEE-EEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEE
T ss_pred cCCCCCcEE-EEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEE
Confidence 554223445 67679999999998542111000 011122222333344556888889887 68899999999998888
Q ss_pred ecCCCCcccceeeeccccC-CCceeEeeEEecCCC---ceEEEeec-CceEEeecCC
Q psy11311 446 FTSGMSQATDSITINPHCE-TSNYIIKALWIPGRQ---STLAIVTA-LNIKIYQLRP 497 (499)
Q Consensus 446 i~~~G~~v~d~l~i~l~l~-~~~fIik~~Wipgsq---~~LAVvT~-~fVKIYDLs~ 497 (499)
....+. + .....+. ....|..+.|-|... ..|+.... ..|+|||+..
T Consensus 198 ~~~~~~-~----~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 198 RGKDGK-L----HVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp ECTTSC-E----EEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred ccCCCc-e----eeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 887776 2 1111222 357899999999962 34555544 5799999864
No 5
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.64 E-value=0.026 Score=50.67 Aligned_cols=115 Identities=10% Similarity=0.120 Sum_probs=72.4
Q ss_pred eeeccCccccc-ceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-ee
Q psy11311 364 MCILSSPQSKR-QHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-EC 441 (499)
Q Consensus 364 mc~L~sp~g~r-q~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC 441 (499)
.++.-+|.+.. +.++|++.+.|.|.|+++... +. +..+. .-.-.|..|+++|.+.++||+++.. ..
T Consensus 73 ~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~-------~~---~~~~~--~~~~~i~~~~~~~~~~~~l~s~~~dg~i 140 (366)
T 3k26_A 73 YTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM-------QC---IKHYV--GHGNAINELKFHPRDPNLLLSVSKDHAL 140 (366)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCEEEEECTTTC-------CE---EEEEE--SCCSCEEEEEECSSCTTEEEEEETTSCE
T ss_pred EEEEeccCCCCCCCEEEEecCCCEEEEEEchhc-------eE---eeeec--CCCCcEEEEEECCCCCCEEEEEeCCCeE
Confidence 33334565543 445588889999999998531 10 11111 2345789999999777888887764 34
Q ss_pred EEEEecCCCCcccceeeeccc--cCCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 442 IVFSFTSGMSQATDSITINPH--CETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 442 ~Vlti~~~G~~v~d~l~i~l~--l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
.|..+.. |+ ....+. ......|..+.|-|..+ .|+... ...|+|||+..
T Consensus 141 ~iwd~~~-~~-----~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~ 192 (366)
T 3k26_A 141 RLWNIQT-DT-----LVAIFGGVEGHRDEVLSADYDLLGE-KIMSCGMDHSLKLWRINS 192 (366)
T ss_dssp EEEETTT-TE-----EEEEECSTTSCSSCEEEEEECTTSS-EEEEEETTSCEEEEESCS
T ss_pred EEEEeec-Ce-----EEEEecccccccCceeEEEECCCCC-EEEEecCCCCEEEEECCC
Confidence 5555443 33 222221 22468899999999765 455554 46899999864
No 6
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=96.43 E-value=0.029 Score=54.23 Aligned_cols=120 Identities=10% Similarity=0.096 Sum_probs=72.4
Q ss_pred ceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEecCCCCcc
Q psy11311 375 QHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSFTSGMSQA 453 (499)
Q Consensus 375 q~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti~~~G~~v 453 (499)
++++|+..+.|.|.|+++...............+..+. .-.-+|.+|+++|.+..+|+.++.. ...|+.++..+. .
T Consensus 141 ~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~-~ 217 (430)
T 2xyi_A 141 ACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLR--GHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPK-E 217 (430)
T ss_dssp EEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEE--CCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCB-G
T ss_pred CcEEEEECCCCcEEEEECCCcccccCccccCCCcEEec--CCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCC-C
Confidence 45668888999999999976533222111001111111 2233678899999987777777764 466666665332 1
Q ss_pred cceeeecccc-CCCceeEeeEEecCCCceEEEe-ecCceEEeecCC
Q psy11311 454 TDSITINPHC-ETSNYIIKALWIPGRQSTLAIV-TALNIKIYQLRP 497 (499)
Q Consensus 454 ~d~l~i~l~l-~~~~fIik~~Wipgsq~~LAVv-T~~fVKIYDLs~ 497 (499)
...+.....+ .....|..+.|-|.....|+.. ....|+|||+..
T Consensus 218 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~ 263 (430)
T 2xyi_A 218 HRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRN 263 (430)
T ss_dssp GGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred CceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCC
Confidence 1111111111 1356799999999555566555 478899999975
No 7
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.16 E-value=0.11 Score=45.63 Aligned_cols=119 Identities=9% Similarity=0.102 Sum_probs=71.7
Q ss_pred eeccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCC-Ccceeeeeccc-eeE
Q psy11311 365 CILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPC-NEELLAVCGLK-ECI 442 (499)
Q Consensus 365 c~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~-ne~~LAV~Glk-eC~ 442 (499)
|+--+|.|+ ++|++...|.|.|.++..--.. .++ +..+. .-.-.|.+|+++|. +.++||++|.. ...
T Consensus 16 ~~~~~~~~~---~l~~~~~dg~i~iw~~~~~~~~-----~~~-~~~~~--~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 16 DVVYDFYGR---HVATCSSDQHIKVFKLDKDTSN-----WEL-SDSWR--AHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp EEEECSSSS---EEEEEETTSEEEEEEECSSSCC-----EEE-EEEEE--CCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred EEEEcCCCC---EEEEeeCCCeEEEEECCCCCCc-----cee-cceec--cCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 333466553 4477789999999998632110 000 11111 23456899999997 57888888875 466
Q ss_pred EEEecCCCCcccc----eeeeccccCCCceeEeeEEecC--CCceEEEee-cCceEEeecCC
Q psy11311 443 VFSFTSGMSQATD----SITINPHCETSNYIIKALWIPG--RQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 443 Vlti~~~G~~v~d----~l~i~l~l~~~~fIik~~Wipg--sq~~LAVvT-~~fVKIYDLs~ 497 (499)
|..+..... ... +....+. .....|..+.|.|. .+ .|+..+ ...|+|||+..
T Consensus 85 vwd~~~~~~-~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iwd~~~ 143 (351)
T 3f3f_A 85 LWEEDPDQE-ECSGRRWNKLCTLN-DSKGSLYSVKFAPAHLGL-KLACLGNDGILRLYDALE 143 (351)
T ss_dssp EEEECTTSC-TTSSCSEEEEEEEC-CCSSCEEEEEECCGGGCS-EEEEEETTCEEEEEECSS
T ss_pred EEecCCCcc-cccccCcceeeeec-ccCCceeEEEEcCCCCCc-EEEEecCCCcEEEecCCC
Confidence 666665322 110 1122222 23678999999998 44 455544 56799999864
No 8
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.10 E-value=0.13 Score=45.68 Aligned_cols=111 Identities=16% Similarity=0.113 Sum_probs=65.6
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEec
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSFT 447 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti~ 447 (499)
+|.| +++|++. .|+|.|.++..-- ....+..+....-.-.|.+++++|. .++|++++.. ...|+.+.
T Consensus 60 ~~~~---~~l~~~~-dg~i~iw~~~~~~-------~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~ 127 (337)
T 1gxr_A 60 SNPT---RHVYTGG-KGCVKVWDISHPG-------NKSPVSQLDCLNRDNYIRSCKLLPD-GCTLIVGGEASTLSIWDLA 127 (337)
T ss_dssp CSSS---SEEEEEC-BSEEEEEETTSTT-------CCSCSEEEECSCTTSBEEEEEECTT-SSEEEEEESSSEEEEEECC
T ss_pred ecCC---cEEEEcC-CCeEEEEECCCCC-------ceeeeecccccCCCCcEEEEEEcCC-CCEEEEEcCCCcEEEEECC
Confidence 5544 3447765 8999999985421 1122233333344567999999995 4677776653 34444444
Q ss_pred CCCCcccceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 448 SGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 448 ~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
.... .....+. .....|..+.|-|..+ .|++.+ ...|+|||+..
T Consensus 128 ~~~~----~~~~~~~-~~~~~i~~~~~~~~~~-~l~~~~~dg~v~~~d~~~ 172 (337)
T 1gxr_A 128 APTP----RIKAELT-SSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHN 172 (337)
T ss_dssp CC------EEEEEEE-CSSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT
T ss_pred CCCc----ceeeecc-cCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCC
Confidence 3221 1111111 1356789999999765 455554 56899999864
No 9
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.04 E-value=0.075 Score=48.65 Aligned_cols=122 Identities=7% Similarity=0.027 Sum_probs=69.4
Q ss_pred eeccCcccccceEEEEeecCCeEEEeehhhhccccccccccc-ccccccccc--------cceeEEEeeecCCCcceeee
Q psy11311 365 CILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKL-TLIKLASVS--------LPITILSVEANPCNEELLAV 435 (499)
Q Consensus 365 c~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kl-tl~rLs~~~--------VpF~Vlsl~~NP~ne~~LAV 435 (499)
|+--+|.|+ .++|++...|.|.|.++...-..... .-++ ....+...- -.-.|.+|+++| +.++||+
T Consensus 50 ~~~~s~~~~--~~l~~~~~dg~i~iw~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~ 125 (425)
T 1r5m_A 50 SSTWNPLDE--SILAYGEKNSVARLARIVETDQEGKK-YWKLTIIAELRHPFALSASSGKTTNQVTCLAWSH-DGNSIVT 125 (425)
T ss_dssp EEEECSSCT--TEEEEEETBTEEEEEEEEEC-------CEEEEEEEEEECCCCCC------CBCEEEEEECT-TSSEEEE
T ss_pred EEEECCCCC--cEEEEecCCceEEEEEEecccCCccc-cccccccccccccccccccccCCCCceEEEEEcC-CCCEEEE
Confidence 333477664 25588888899999998211110000 0000 011111111 123799999999 4578887
Q ss_pred eccceeEEEEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecCceEEeecCC
Q psy11311 436 CGLKECIVFSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLRP 497 (499)
Q Consensus 436 ~GlkeC~Vlti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~ 497 (499)
++.. ..|...+.+|. ....+ . .....|..+.|-|..+..++......|+|||+..
T Consensus 126 ~~~d-g~i~i~~~~~~-~~~~~----~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 180 (425)
T 1r5m_A 126 GVEN-GELRLWNKTGA-LLNVL----N-FHRAPIVSVKWNKDGTHIISMDVENVTILWNVIS 180 (425)
T ss_dssp EETT-SCEEEEETTSC-EEEEE----C-CCCSCEEEEEECTTSSEEEEEETTCCEEEEETTT
T ss_pred EeCC-CeEEEEeCCCC-eeeec----c-CCCccEEEEEECCCCCEEEEEecCCeEEEEECCC
Confidence 7654 44555556666 32222 1 1257899999999877444444467899999864
No 10
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.02 E-value=0.037 Score=54.96 Aligned_cols=121 Identities=15% Similarity=0.144 Sum_probs=73.1
Q ss_pred cceEEEEeecCCeEEEeehhhhcccccccccc---cccccccccccceeEEEeeecCCCcceeee---eccceeEEEEec
Q psy11311 374 RQHLVAVSHEKGKITLLQLSGLLKQIDSSKRK---LTLIKLASVSLPITILSVEANPCNEELLAV---CGLKECIVFSFT 447 (499)
Q Consensus 374 rq~LvAVshEk~KVtllqls~LLkqadss~~K---ltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV---~GlkeC~Vlti~ 447 (499)
..+++|+++. +.|.|+....++.......++ .+..+....+++..|.+|+++|.. ++||| .|-.+..|...+
T Consensus 47 ~~~~l~~~~~-dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg-~~lav~~~sgs~d~~v~iwd 124 (434)
T 2oit_A 47 KYGLVFAGGA-SGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDN-LTLSACMMSSEYGSIIAFFD 124 (434)
T ss_dssp TTTEEEEEET-TEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTS-CEEEEEEEETTTEEEEEEEE
T ss_pred CCCEEEEECC-CEEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCC-CEEEEEEeccCCCceEEEEE
Confidence 3456688654 459999999887653222211 122333344567789999999975 78998 566666655553
Q ss_pred --CC--CCcccc--ee-eeccccCCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 448 --SG--MSQATD--SI-TINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 448 --~~--G~~v~d--~l-~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
.. |. ... .+ .+..-..-+..|..+.|-|.....||..+ ...|+|||+..
T Consensus 125 ~~~~~~~~-~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~ 181 (434)
T 2oit_A 125 VRTFSNEA-KQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTE 181 (434)
T ss_dssp HHHHHCTT-CSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESS
T ss_pred ccccccCC-cCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCC
Confidence 21 11 000 00 11111112678999999998555677554 56899999864
No 11
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.96 E-value=0.11 Score=46.56 Aligned_cols=111 Identities=13% Similarity=0.194 Sum_probs=69.2
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCC--Ccceeeeeccc-eeEEEE
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPC--NEELLAVCGLK-ECIVFS 445 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~--ne~~LAV~Glk-eC~Vlt 445 (499)
+|.| .++|++.+.|.|.++++..-- .+.....+..|.+|+++|. +.++|++++.. ...|+.
T Consensus 177 ~~~~---~~l~~~~~d~~i~i~d~~~~~-------------~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d 240 (357)
T 3i2n_A 177 NQEE---RVVCAGYDNGDIKLFDLRNMA-------------LRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFD 240 (357)
T ss_dssp C-CC---CEEEEEETTSEEEEEETTTTE-------------EEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEE
T ss_pred CCCC---CEEEEEccCCeEEEEECccCc-------------eeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEe
Confidence 5544 345777789999999985421 1112334567999999996 66788777654 344555
Q ss_pred ecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 446 FTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 446 i~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
+.. +. ....+.+.........|..+.|-|..+..|+... ...|+|||+..
T Consensus 241 ~~~-~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 241 MRT-QH-PTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp EEE-EE-TTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEEC
T ss_pred CcC-CC-cccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCC
Confidence 544 33 3333332211123678999999998664555554 45899999864
No 12
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.95 E-value=0.12 Score=46.55 Aligned_cols=115 Identities=17% Similarity=0.252 Sum_probs=70.7
Q ss_pred cCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCC------------Ccceeee
Q psy11311 368 SSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPC------------NEELLAV 435 (499)
Q Consensus 368 ~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~------------ne~~LAV 435 (499)
-+|.+....| +++...+.|.|+++...-. . .+.....-+..|.+++++|. +.++||+
T Consensus 109 ~~~~~~~~~l-~~~~~d~~i~v~d~~~~~~-----~-----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~ 177 (379)
T 3jrp_A 109 WAPHEYGPLL-LVASSDGKVSVVEFKENGT-----T-----SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVT 177 (379)
T ss_dssp ECCGGGCSEE-EEEETTSEEEEEECCTTSC-----C-----CEEEEECCTTCEEEEEECCCC----------CTTCEEEE
T ss_pred eCCCCCCCEE-EEecCCCcEEEEecCCCCc-----e-----eeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEE
Confidence 3665323444 7777999999999864311 0 11112234557899999997 6778887
Q ss_pred eccc-eeEEEEecCCCCcccceeeeccccC-CCceeEeeEEecCC--CceEEEee-cCceEEeecCC
Q psy11311 436 CGLK-ECIVFSFTSGMSQATDSITINPHCE-TSNYIIKALWIPGR--QSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 436 ~Glk-eC~Vlti~~~G~~v~d~l~i~l~l~-~~~fIik~~Wipgs--q~~LAVvT-~~fVKIYDLs~ 497 (499)
++.. ...|+.+..... . ..+...+. ....|..+.|-|.. ...|+... ...|+|||+..
T Consensus 178 ~~~dg~i~i~d~~~~~~--~--~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 178 GGADNLVKIWKYNSDAQ--T--YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp EETTSCEEEEEEETTTT--E--EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred EeCCCeEEEEEecCCCc--c--eeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCC
Confidence 7764 455665554332 1 11111222 26789999999984 33566655 45799999875
No 13
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.90 E-value=0.13 Score=46.26 Aligned_cols=123 Identities=12% Similarity=0.200 Sum_probs=72.5
Q ss_pred eeccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEE
Q psy11311 365 CILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIV 443 (499)
Q Consensus 365 c~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~V 443 (499)
++--+|.+..+.+++++.+.|.|.|+++..-- ...++.+.+ ...-.-.|.+++++|....+||.+|.. ..+|
T Consensus 214 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 286 (357)
T 3i2n_A 214 SLEFDRKDISMNKLVATSLEGKFHVFDMRTQH-----PTKGFASVS--EKAHKSTVWQVRHLPQNRELFLTAGGAGGLHL 286 (357)
T ss_dssp EEEESCSSSSCCEEEEEESTTEEEEEEEEEEE-----TTTEEEEEE--EECCSSCEEEEEEETTEEEEEEEEETTSEEEE
T ss_pred EEEcCCCCCCCCEEEEECCCCeEEEEeCcCCC-----cccceeeec--cCCCcCCEEEEEECCCCCcEEEEEeCCCcEEE
Confidence 33346633123344777899999999985411 011111111 112345789999999886688887775 5666
Q ss_pred EEecCCCCccc--------------ceeeeccccCCCceeEeeEEecCCCceEEE--eecCceEEeecCC
Q psy11311 444 FSFTSGMSQAT--------------DSITINPHCETSNYIIKALWIPGRQSTLAI--VTALNIKIYQLRP 497 (499)
Q Consensus 444 lti~~~G~~v~--------------d~l~i~l~l~~~~fIik~~Wipgsq~~LAV--vT~~fVKIYDLs~ 497 (499)
+.+..... .. -+....+.. ....|..+.|-|..+ .|++ .....|+|||+.+
T Consensus 287 wd~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~-~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 287 WKYEYPIQ-RSKKDSEGIEMGVAGSVSLLQNVTL-STQPISSLDWSPDKR-GLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp EEEECCSC-C--CCTTSCCCCCCCEEEEEEEEEC-CSSCEEEEEECSSST-TEEEEEETTSEEEEEEECC
T ss_pred eecCCCcc-cccccCCCCccccccccceeecccc-CCCCeeEEEEcCCCC-eEEEEecCCCcEEEEECCC
Confidence 66665333 10 011111111 257899999999876 4554 3357999999875
No 14
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.80 E-value=0.085 Score=48.77 Aligned_cols=115 Identities=10% Similarity=0.124 Sum_probs=71.4
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccc-cccccceeEEEeeecCCCcceeeeeccc----eeEE
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKL-ASVSLPITILSVEANPCNEELLAVCGLK----ECIV 443 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rL-s~~~VpF~Vlsl~~NP~ne~~LAV~Glk----eC~V 443 (499)
+|.+ ++++|++...+.|.|.++..--. ..+++.- ........|.+|+++|.+..+||+++.. ..+|
T Consensus 174 ~~~~--~~~l~~~~~dg~v~iwd~~~~~~-------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~ 244 (416)
T 2pm9_A 174 NQSL--AHVFASAGSSNFASIWDLKAKKE-------VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILI 244 (416)
T ss_dssp CSSC--TTEEEEESSSSCEEEEETTTTEE-------EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCE
T ss_pred CCCC--CcEEEEEcCCCCEEEEECCCCCc-------ceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEE
Confidence 5553 34557778999999999854110 0111100 0011156799999999988888888877 5667
Q ss_pred EEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 444 FSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 444 lti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
+.+...+. .... +.......|..+.|-|.....|+..+ ...|+|||+..
T Consensus 245 ~d~~~~~~-~~~~----~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~ 294 (416)
T 2pm9_A 245 WDLRNANT-PLQT----LNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES 294 (416)
T ss_dssp EETTSTTS-CSBC----CCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSS
T ss_pred EeCCCCCC-CcEE----eecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC
Confidence 77665433 2111 11123578999999993333566555 46899999864
No 15
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.75 E-value=0.12 Score=47.90 Aligned_cols=111 Identities=21% Similarity=0.258 Sum_probs=71.3
Q ss_pred cCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEec
Q psy11311 368 SSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFT 447 (499)
Q Consensus 368 ~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~ 447 (499)
.+|.|+ ++|.+.+.|.|.|.++..-- .+..+. .+-+|.+|+|+|.. .+||+++-...+|+.+.
T Consensus 204 ~sp~g~---~l~s~~~dg~i~iwd~~~~~----------~~~~~~---~~~~v~~~~~sp~~-~~la~~~~~~i~v~~~~ 266 (319)
T 3frx_A 204 ASPDGT---LIASAGKDGEIMLWNLAAKK----------AMYTLS---AQDEVFSLAFSPNR-YWLAAATATGIKVFSLD 266 (319)
T ss_dssp ECTTSS---EEEEEETTCEEEEEETTTTE----------EEEEEE---CCSCEEEEEECSSS-SEEEEEETTEEEEEEET
T ss_pred EcCCCC---EEEEEeCCCeEEEEECCCCc----------EEEEec---CCCcEEEEEEcCCC-CEEEEEcCCCcEEEEeC
Confidence 377653 45777899999999985421 011111 23368999999964 78888888888888887
Q ss_pred CCCCcccceeeeccccC---CCceeEeeEEecCCCceEEEeecCceEEeecCC
Q psy11311 448 SGMSQATDSITINPHCE---TSNYIIKALWIPGRQSTLAIVTALNIKIYQLRP 497 (499)
Q Consensus 448 ~~G~~v~d~l~i~l~l~---~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~ 497 (499)
. +. ..+.+.-+..-. ....+..+.|-|..+..++--....|+|||+..
T Consensus 267 ~-~~-~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 267 P-QY-LVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp T-EE-EEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred c-Ce-eeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 5 23 222222221111 245688999999987444444556899999853
No 16
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.70 E-value=0.064 Score=49.57 Aligned_cols=118 Identities=17% Similarity=0.244 Sum_probs=72.2
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccce-eEEEEec
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKE-CIVFSFT 447 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glke-C~Vlti~ 447 (499)
+|.+ ++++|.+...+.|.|.++...-.....- ....+. ....-.-.|.+|+++|.+..+||+++... ..|+.+.
T Consensus 122 ~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 196 (416)
T 2pm9_A 122 NAKQ--DNVLASGGNNGEIFIWDMNKCTESPSNY-TPLTPG--QSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLK 196 (416)
T ss_dssp CSSS--TTBEEEECSSSCEEBCBTTTTSSCTTTC-CCBCCC--CSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETT
T ss_pred cCCC--CCEEEEEcCCCeEEEEECCCCccccccc-cccccc--cccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECC
Confidence 5653 2344777789999999986432110000 011111 11223446889999998777888777642 3444443
Q ss_pred CCCCcccceeeeccccCC-----CceeEeeEEecCCCceEEEeecC----ceEEeecCC
Q psy11311 448 SGMSQATDSITINPHCET-----SNYIIKALWIPGRQSTLAIVTAL----NIKIYQLRP 497 (499)
Q Consensus 448 ~~G~~v~d~l~i~l~l~~-----~~fIik~~Wipgsq~~LAVvT~~----fVKIYDLs~ 497 (499)
. ++ ....+.... ...|..+.|-|.....|+..+.+ .|+|||+..
T Consensus 197 ~-~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~ 249 (416)
T 2pm9_A 197 A-KK-----EVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRN 249 (416)
T ss_dssp T-TE-----EEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTS
T ss_pred C-CC-----cceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCC
Confidence 3 33 222222222 67899999999876678888877 899999975
No 17
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.68 E-value=0.2 Score=44.99 Aligned_cols=108 Identities=15% Similarity=0.075 Sum_probs=67.5
Q ss_pred EEEEeecCCeEEEeehhh-hcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEecCCC----
Q psy11311 377 LVAVSHEKGKITLLQLSG-LLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSFTSGM---- 450 (499)
Q Consensus 377 LvAVshEk~KVtllqls~-LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti~~~G---- 450 (499)
| +++...++|.|+++.. .... ........+..|.+|+++|.+.++||+++.. ...|..+...|
T Consensus 163 l-~~~~~d~~i~i~d~~~~~~~~----------~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~ 231 (342)
T 1yfq_A 163 L-IVGMNNSQVQWFRLPLCEDDN----------GTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYN 231 (342)
T ss_dssp E-EEEESTTEEEEEESSCCTTCC----------CEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTT
T ss_pred E-EEEeCCCeEEEEECCcccccc----------ceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccc
Confidence 5 6667999999999865 2210 1111224456789999999445788877765 44555677653
Q ss_pred -CcccceeeeccccC----CCceeEeeEEecCCCceEEEeec-CceEEeecCC
Q psy11311 451 -SQATDSITINPHCE----TSNYIIKALWIPGRQSTLAIVTA-LNIKIYQLRP 497 (499)
Q Consensus 451 -~~v~d~l~i~l~l~----~~~fIik~~Wipgsq~~LAVvT~-~fVKIYDLs~ 497 (499)
. ..-.+..+.... ....|..+.|-|..+ .|+..+. ..|+|||+..
T Consensus 232 ~~-~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 232 SS-KRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK-FLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp CT-TCEEEECCCCCTTCCSSCCCEEEEEECTTTC-CEEEEETTSCEEEEETTT
T ss_pred cc-cceeeecccccccccccceeEEEEEEcCCCC-EEEEecCCceEEEEcCcc
Confidence 3 222222222211 134899999999766 5666554 4899999864
No 18
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=95.64 E-value=0.11 Score=50.66 Aligned_cols=109 Identities=20% Similarity=0.226 Sum_probs=69.4
Q ss_pred cCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCC---------Ccceeeeecc
Q psy11311 368 SSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPC---------NEELLAVCGL 438 (499)
Q Consensus 368 ~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~---------ne~~LAV~Gl 438 (499)
-||.|+ ++|+..+.|.|.|.++...-. +..+. ..-.-.|.+|+++|. +.++||+++.
T Consensus 496 ~s~~g~---~l~~~~~dg~i~iw~~~~~~~----------~~~~~-~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~ 561 (615)
T 1pgu_A 496 ISPSET---YIAAGDVMGKILLYDLQSREV----------KTSRW-AFRTSKINAISWKPAEKGANEEEIEEDLVATGSL 561 (615)
T ss_dssp ECTTSS---EEEEEETTSCEEEEETTTTEE----------EECCS-CCCSSCEEEEEECCCC------CCSCCEEEEEET
T ss_pred ECCCCC---EEEEcCCCCeEEEeeCCCCcc----------eeEee-cCCCCceeEEEEcCccccccccccCCCEEEEEcC
Confidence 367653 447778999999999853211 01111 013457899999994 6688888876
Q ss_pred c-eeEEEEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEeecCCC
Q psy11311 439 K-ECIVFSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRPE 498 (499)
Q Consensus 439 k-eC~Vlti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~d 498 (499)
. ...|+.+...+. .... +. .....|..+.|.|..+ |+... ...|+|||+..|
T Consensus 562 dg~i~iw~~~~~~~-~~~~----~~-~h~~~v~~l~~s~~~~--l~s~~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 562 DTNIFIYSVKRPMK-IIKA----LN-AHKDGVNNLLWETPST--LVSSGADACIKRWNVVLE 615 (615)
T ss_dssp TSCEEEEESSCTTC-CEEE----TT-SSTTCEEEEEEEETTE--EEEEETTSCEEEEEEC--
T ss_pred CCcEEEEECCCCce-echh----hh-cCccceEEEEEcCCCC--eEEecCCceEEEEeeecC
Confidence 5 456666665434 2211 11 1257899999999987 54444 557999999864
No 19
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=95.63 E-value=0.14 Score=49.38 Aligned_cols=115 Identities=19% Similarity=0.258 Sum_probs=74.7
Q ss_pred cCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEe
Q psy11311 368 SSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSF 446 (499)
Q Consensus 368 ~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti 446 (499)
-+|.| ++++|+....|.|.|+++...-. .+..+. .-.-.|.+|.++|.++.+||++|.. ...|+-+
T Consensus 285 ~~p~~--~~~l~tg~~dg~v~vwd~~~~~~---------~~~~~~--~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~ 351 (430)
T 2xyi_A 285 FNPYS--EFILATGSADKTVALWDLRNLKL---------KLHSFE--SHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 351 (430)
T ss_dssp ECSSC--TTEEEEEETTSEEEEEETTCTTS---------CSEEEE--CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEG
T ss_pred eCCCC--CCEEEEEeCCCeEEEEeCCCCCC---------CeEEee--cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeC
Confidence 36655 44668878899999999965311 111111 1234689999999988888888876 5677888
Q ss_pred cCCCCcccc---------eeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 447 TSGMSQATD---------SITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 447 ~~~G~~v~d---------~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
+..++ ... ++..... ..+..|..+.|-|..+..|+.+. ...|+||++..
T Consensus 352 ~~~~~-~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 352 SKIGE-EQSTEDAEDGPPELLFIHG-GHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp GGTTC-CCCHHHHHHCCTTEEEECC-CCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred CCCcc-ccCccccccCCcceEEEcC-CCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 77554 111 1111111 12678999999999774454444 45699999863
No 20
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.60 E-value=0.24 Score=44.47 Aligned_cols=118 Identities=15% Similarity=0.133 Sum_probs=68.6
Q ss_pred eeccCcccc--cceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCc---ceeeeeccc
Q psy11311 365 CILSSPQSK--RQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNE---ELLAVCGLK 439 (499)
Q Consensus 365 c~L~sp~g~--rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne---~~LAV~Glk 439 (499)
|+--+|++. ...++|. ...|+|.|.++..- .....++........-.|.+++++|... .+||++|.
T Consensus 23 ~i~~~p~~~~~~~~~~~~-~~~~~v~vw~~~~~-------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~- 93 (366)
T 3k26_A 23 GVQFNWHSKEGDPLVFAT-VGSNRVTLYECHSQ-------GEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS- 93 (366)
T ss_dssp EEEECTTCCTTSCEEEEE-EETTEEEEEEECGG-------GCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET-
T ss_pred EEEEecccCCCCceEEEE-CCCCEEEEEEcCCC-------cEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC-
Confidence 333466421 2335455 57779999998521 1111223222222345689999999854 46666664
Q ss_pred eeEEEEecC-CCCcccceeeeccccCCCceeEeeEEecCCCceEEEeec-CceEEeecCC
Q psy11311 440 ECIVFSFTS-GMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTA-LNIKIYQLRP 497 (499)
Q Consensus 440 eC~Vlti~~-~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~-~fVKIYDLs~ 497 (499)
+-.|..++- .|+ ..- .+. .....|..+.|-|.....|+..+. ..|+|||+..
T Consensus 94 dg~i~v~d~~~~~-~~~----~~~-~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 94 RGIIRIINPITMQ-CIK----HYV-GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TCEEEEECTTTCC-EEE----EEE-SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCEEEEEEchhce-Eee----eec-CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 445555553 244 222 222 236789999999943446666664 5899999865
No 21
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=95.59 E-value=0.21 Score=46.72 Aligned_cols=118 Identities=12% Similarity=0.053 Sum_probs=72.1
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccce-eEEEEec
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKE-CIVFSFT 447 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glke-C~Vlti~ 447 (499)
+|.| .++|.+ ..+.|.|.++..-- ...+.+.+++.....-.-.|.+++++|...++||+++... .+|+-+.
T Consensus 186 ~~~~---~~l~s~-~d~~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 257 (447)
T 3dw8_B 186 NSDY---ETYLSA-DDLRINLWHLEITD----RSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMR 257 (447)
T ss_dssp CTTS---SEEEEE-CSSEEEEEETTEEE----EEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred cCCC---CEEEEe-CCCeEEEEECCCCC----ceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECc
Confidence 5654 244776 89999999986311 1111222333333445567999999998878888887653 4444444
Q ss_pred CCCCcccceeeeccccCCC-----------ceeEeeEEecCCCceEEEeecCceEEeecCC
Q psy11311 448 SGMSQATDSITINPHCETS-----------NYIIKALWIPGRQSTLAIVTALNIKIYQLRP 497 (499)
Q Consensus 448 ~~G~~v~d~l~i~l~l~~~-----------~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~ 497 (499)
. |. ...+..-.+....+ ..|..+.|-|..+ .|+..+...|+|||+..
T Consensus 258 ~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~~~v~iwd~~~ 315 (447)
T 3dw8_B 258 A-SA-LCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR-YMMTRDYLSVKVWDLNM 315 (447)
T ss_dssp T-CS-SSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS-EEEEEESSEEEEEETTC
T ss_pred C-Cc-cccceeeEeccCCCccccccccccCceEEEEEECCCCC-EEEEeeCCeEEEEeCCC
Confidence 3 33 21111111111111 3899999999765 57777779999999975
No 22
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=95.57 E-value=0.12 Score=48.71 Aligned_cols=112 Identities=11% Similarity=0.146 Sum_probs=68.0
Q ss_pred eccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEE
Q psy11311 366 ILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFS 445 (499)
Q Consensus 366 ~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlt 445 (499)
+--+|.|+ +++|.+...|.|.|.++..- +. +..+....-+-.|.+|+++| +.++||+++. +-.|..
T Consensus 137 ~~~~p~~~--~~l~s~~~dg~i~iwd~~~~-------~~---~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~-d~~i~i 202 (402)
T 2aq5_A 137 VAWHPTAQ--NVLLSAGCDNVILVWDVGTG-------AA---VLTLGPDVHPDTIYSVDWSR-DGALICTSCR-DKRVRV 202 (402)
T ss_dssp EEECSSBT--TEEEEEETTSCEEEEETTTT-------EE---EEEECTTTCCSCEEEEEECT-TSSCEEEEET-TSEEEE
T ss_pred EEECcCCC--CEEEEEcCCCEEEEEECCCC-------Cc---cEEEecCCCCCceEEEEECC-CCCEEEEEec-CCcEEE
Confidence 33366652 34477778999999998531 11 11111122345789999999 5567776664 444544
Q ss_pred ecCC-CCcccceeeecc-ccCCCceeEeeEEecCCCceEEEe----ecCceEEeecCC
Q psy11311 446 FTSG-MSQATDSITINP-HCETSNYIIKALWIPGRQSTLAIV----TALNIKIYQLRP 497 (499)
Q Consensus 446 i~~~-G~~v~d~l~i~l-~l~~~~fIik~~Wipgsq~~LAVv----T~~fVKIYDLs~ 497 (499)
++-+ |+ ....+ ....+..+..+.|.|... .|++. ....|+|||+..
T Consensus 203 wd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~~~~d~~i~iwd~~~ 254 (402)
T 2aq5_A 203 IEPRKGT-----VVAEKDRPHEGTRPVHAVFVSEGK-ILTTGFSRMSERQVALWDTKH 254 (402)
T ss_dssp EETTTTE-----EEEEEECSSCSSSCCEEEECSTTE-EEEEEECTTCCEEEEEEETTB
T ss_pred EeCCCCc-----eeeeeccCCCCCcceEEEEcCCCc-EEEEeccCCCCceEEEEcCcc
Confidence 4432 44 22333 233466789999999744 45554 578999999864
No 23
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=95.31 E-value=0.24 Score=46.98 Aligned_cols=112 Identities=15% Similarity=0.229 Sum_probs=68.8
Q ss_pred eeccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEE
Q psy11311 365 CILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVF 444 (499)
Q Consensus 365 c~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vl 444 (499)
++..+|.+ ++++|+..+.+.|.|.++..-- ...++. .-.-.|.+|+|+|.+..+||.+|. |+.|.
T Consensus 231 ~v~~sp~~--~~~la~g~~d~~i~~wd~~~~~-------~~~~~~-----~~~~~v~~l~~sp~~~~~lasgs~-D~~i~ 295 (357)
T 4g56_B 231 SVTWHPEK--DDTFACGDETGNVSLVNIKNPD-------SAQTSA-----VHSQNITGLAYSYHSSPFLASISE-DCTVA 295 (357)
T ss_dssp EEEECTTS--TTEEEEEESSSCEEEEESSCGG-------GCEEEC-----CCSSCEEEEEECSSSSCCEEEEET-TSCEE
T ss_pred chhhhhcc--cceEEEeecccceeEEECCCCc-------EeEEEe-----ccceeEEEEEEcCCCCCEEEEEeC-CCEEE
Confidence 33346654 4566888899999999974310 001111 122358899999998888887775 44444
Q ss_pred EecCC-CCcccceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEeecCCC
Q psy11311 445 SFTSG-MSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRPE 498 (499)
Q Consensus 445 ti~~~-G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~d 498 (499)
..+-+ |+ + +.. +.-...|..+.|=|.....||-.. ...|+|||+.++
T Consensus 296 iwd~~~~~-~-----~~~-~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 296 VLDADFSE-V-----FRD-LSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EECTTSCE-E-----EEE-CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EEECCCCc-E-----eEE-CCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 44433 33 2 111 223678999999884444565444 468999999753
No 24
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=95.28 E-value=0.3 Score=44.49 Aligned_cols=115 Identities=17% Similarity=0.187 Sum_probs=68.7
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEec
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSFT 447 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti~ 447 (499)
+|.+....++++....+.|.|+++..- +...+++ .-.-.|.+|+++|....+||+++.. ...|+.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~v~~~d~~~~-------~~~~~~~-----~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~ 217 (408)
T 4a11_B 150 SPVSTKHCLVAVGTRGPKVQLCDLKSG-------SCSHILQ-----GHRQEILAVSWSPRYDYILATASADSRVKLWDVR 217 (408)
T ss_dssp CSSCSSCCEEEEEESSSSEEEEESSSS-------CCCEEEC-----CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred ecCCCCCcEEEEEcCCCeEEEEeCCCc-------ceeeeec-----CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECC
Confidence 555656667788889999999998431 1011111 1234688999999876556665543 34455554
Q ss_pred CCCCcccceee---------eccc-cCCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 448 SGMSQATDSIT---------INPH-CETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 448 ~~G~~v~d~l~---------i~l~-l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
.... ....+. +... ......|..+.|-|..+ .|+... ...|+|||+..
T Consensus 218 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~~~ 276 (408)
T 4a11_B 218 RASG-CLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL-HLLTVGTDNRMRLWNSSN 276 (408)
T ss_dssp CSSC-CSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT
T ss_pred CCCc-ccccccccccccceeeccccccccCceeEEEEcCCCC-EEEEecCCCeEEEEECCC
Confidence 4332 111110 0001 12357899999999866 455554 56899999875
No 25
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=95.27 E-value=0.16 Score=49.09 Aligned_cols=118 Identities=12% Similarity=0.093 Sum_probs=68.5
Q ss_pred eeccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEE
Q psy11311 365 CILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVF 444 (499)
Q Consensus 365 c~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vl 444 (499)
|+--||.| +.|+|++.+.|.|.|.++..- . .-.+..+.....+-.|.+|+++|.+ ++||+++. +-.|.
T Consensus 107 ~~~~s~d~--~~l~~~~~~dg~v~iwd~~~~-----~---~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~-~g~v~ 174 (450)
T 2vdu_B 107 NLRLTSDE--SRLIACADSDKSLLVFDVDKT-----S---KNVLKLRKRFCFSKRPNAISIAEDD-TTVIIADK-FGDVY 174 (450)
T ss_dssp EEEECTTS--SEEEEEEGGGTEEEEEEECSS-----S---SSCEEEEEEEECSSCEEEEEECTTS-SEEEEEET-TSEEE
T ss_pred EEEEcCCC--CEEEEEECCCCeEEEEECcCC-----C---CceeeeeecccCCCCceEEEEcCCC-CEEEEEeC-CCcEE
Confidence 33347765 455577778899999998410 0 0112223333456678999999965 67777765 33444
Q ss_pred EecC-CCCcccceeeeccccCCCceeEeeEEecC---CCceEEEee-cCceEEeecCC
Q psy11311 445 SFTS-GMSQATDSITINPHCETSNYIIKALWIPG---RQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 445 ti~~-~G~~v~d~l~i~l~l~~~~fIik~~Wipg---sq~~LAVvT-~~fVKIYDLs~ 497 (499)
.+.- .+. .... .+..-......|..+.|-|. .+ .|+... ...|+|||+..
T Consensus 175 ~~~~~~~~-~~~~-~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~d~~i~vwd~~~ 229 (450)
T 2vdu_B 175 SIDINSIP-EEKF-TQEPILGHVSMLTDVHLIKDSDGHQ-FIITSDRDEHIKISHYPQ 229 (450)
T ss_dssp EEETTSCC-CSSC-CCCCSEECSSCEEEEEEEECTTSCE-EEEEEETTSCEEEEEESC
T ss_pred EEecCCcc-cccc-cceeeecccCceEEEEEcCCCCCCc-EEEEEcCCCcEEEEECCC
Confidence 4432 233 1110 01111112568999999997 44 444444 45899999864
No 26
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.21 E-value=0.25 Score=45.76 Aligned_cols=116 Identities=10% Similarity=0.084 Sum_probs=68.3
Q ss_pred eeeccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeE
Q psy11311 364 MCILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECI 442 (499)
Q Consensus 364 mc~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~ 442 (499)
.++-.+|......| |.+...|.|.|.++..- +. .........-.|.+++++|. ..+||+++.. ..+
T Consensus 129 ~~~~~~~~~~~~~l-~s~s~dg~i~~wd~~~~---------~~--~~~~~~~~~~~i~~~~~~pd-g~~lasg~~dg~i~ 195 (343)
T 3lrv_A 129 IYMYGHNEVNTEYF-IWADNRGTIGFQSYEDD---------SQ--YIVHSAKSDVEYSSGVLHKD-SLLLALYSPDGILD 195 (343)
T ss_dssp EEEECCC---CCEE-EEEETTCCEEEEESSSS---------CE--EEEECCCSSCCCCEEEECTT-SCEEEEECTTSCEE
T ss_pred EEEEcCCCCCCCEE-EEEeCCCcEEEEECCCC---------cE--EEEEecCCCCceEEEEECCC-CCEEEEEcCCCEEE
Confidence 34434662122345 66679999999998521 11 11111122334788999994 4677776543 344
Q ss_pred EEEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecCceEEeecCCC
Q psy11311 443 VFSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLRPE 498 (499)
Q Consensus 443 Vlti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~d 498 (499)
|+-+.. |+ . +...+...-...|..+.|-|..+ .|+....+.|+|||+.+.
T Consensus 196 iwd~~~-~~-~---~~~~~~~~h~~~v~~l~fs~~g~-~l~s~~~~~v~iwd~~~~ 245 (343)
T 3lrv_A 196 VYNLSS-PD-Q---ASSRFPVDEEAKIKEVKFADNGY-WMVVECDQTVVCFDLRKD 245 (343)
T ss_dssp EEESSC-TT-S---CCEECCCCTTSCEEEEEECTTSS-EEEEEESSBEEEEETTSS
T ss_pred EEECCC-CC-C---CccEEeccCCCCEEEEEEeCCCC-EEEEEeCCeEEEEEcCCC
Confidence 555444 33 1 11222222257899999999865 688888889999999763
No 27
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=95.13 E-value=0.23 Score=46.83 Aligned_cols=113 Identities=15% Similarity=0.215 Sum_probs=65.0
Q ss_pred EEEEe--ecCCeEEEeehhhhc--cccccccccccccc-cc-ccccceeEEEeeecCCCcceeeeeccce--eEEEEecC
Q psy11311 377 LVAVS--HEKGKITLLQLSGLL--KQIDSSKRKLTLIK-LA-SVSLPITILSVEANPCNEELLAVCGLKE--CIVFSFTS 448 (499)
Q Consensus 377 LvAVs--hEk~KVtllqls~LL--kqadss~~Kltl~r-Ls-~~~VpF~Vlsl~~NP~ne~~LAV~Glke--C~Vlti~~ 448 (499)
++|++ ...|.|.|.++..-- ...+...+..++.| +. ...-.-.|.+|+++| +..+||.++... ..|.-+..
T Consensus 149 ~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~ 227 (355)
T 3vu4_A 149 LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTED 227 (355)
T ss_dssp EEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECT-TSSEEEEEETTCSEEEEEETTT
T ss_pred EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC-CCCEEEEEeCCCCEEEEEECCC
Confidence 44774 688999999986421 00000111112222 11 112234689999999 558899888875 45555543
Q ss_pred CCCcccceeeeccccC-CCceeEeeEEecCCCceEEEeec-CceEEeecCC
Q psy11311 449 GMSQATDSITINPHCE-TSNYIIKALWIPGRQSTLAIVTA-LNIKIYQLRP 497 (499)
Q Consensus 449 ~G~~v~d~l~i~l~l~-~~~fIik~~Wipgsq~~LAVvT~-~fVKIYDLs~ 497 (499)
|+ . .-.+... ....|..+.|-|..+ .||.... ..|+|||+..
T Consensus 228 -~~-~----~~~~~~g~h~~~v~~~~~s~~~~-~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 228 -GV-L----VREFRRGLDRADVVDMKWSTDGS-KLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp -CC-E----EEEEECTTCCSCEEEEEECTTSC-EEEEEETTCEEEEEESSC
T ss_pred -Cc-E----EEEEEcCCCCCcEEEEEECCCCC-EEEEEECCCEEEEEEccC
Confidence 55 2 2222211 357899999999866 4555554 5899999965
No 28
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.07 E-value=0.32 Score=43.48 Aligned_cols=106 Identities=10% Similarity=0.110 Sum_probs=66.4
Q ss_pred cCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEe
Q psy11311 368 SSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSF 446 (499)
Q Consensus 368 ~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti 446 (499)
-+|.|+ ++|++...|.|.|.++..- +. +..+. .-.-.|.+|+++| +.++||+++.. ...|+.+
T Consensus 40 ~s~~~~---~l~~~~~dg~i~vwd~~~~-------~~---~~~~~--~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~ 103 (369)
T 3zwl_B 40 YNKEGD---LLFSCSKDSSASVWYSLNG-------ER---LGTLD--GHTGTIWSIDVDC-FTKYCVTGSADYSIKLWDV 103 (369)
T ss_dssp ECTTSC---EEEEEESSSCEEEEETTTC-------CE---EEEEC--CCSSCEEEEEECT-TSSEEEEEETTTEEEEEET
T ss_pred EcCCCC---EEEEEeCCCEEEEEeCCCc-------hh---hhhhh--hcCCcEEEEEEcC-CCCEEEEEeCCCeEEEEEC
Confidence 366553 5588788999999987431 10 11111 1234689999999 45788877764 2344444
Q ss_pred cCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeec------CceEEeecCCC
Q psy11311 447 TSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTA------LNIKIYQLRPE 498 (499)
Q Consensus 447 ~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~------~fVKIYDLs~d 498 (499)
.. |+ ....+. ....|..+.|-|..+ .|++.+. ..|+|||+...
T Consensus 104 ~~-~~-~~~~~~------~~~~v~~~~~~~~~~-~l~~~~~~~~~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 104 SN-GQ-CVATWK------SPVPVKRVEFSPCGN-YFLAILDNVMKNPGSINIYEIERD 152 (369)
T ss_dssp TT-CC-EEEEEE------CSSCEEEEEECTTSS-EEEEEECCBTTBCCEEEEEEEEEC
T ss_pred CC-Cc-EEEEee------cCCCeEEEEEccCCC-EEEEecCCccCCCCEEEEEEecCC
Confidence 33 44 222221 366799999999876 5555555 59999998653
No 29
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.07 E-value=0.26 Score=45.71 Aligned_cols=111 Identities=18% Similarity=0.103 Sum_probs=68.7
Q ss_pred cCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEe
Q psy11311 368 SSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSF 446 (499)
Q Consensus 368 ~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti 446 (499)
-+|.|. +++|++...|.|.|.++..--. . ..+....-.-.|.+|+++|.+.++||+++.. ...|..+
T Consensus 81 ~~~~~~--~~l~s~~~dg~i~iwd~~~~~~--------~--~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~ 148 (383)
T 3ei3_B 81 WHPTHP--TTVAVGSKGGDIILWDYDVQNK--------T--SFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDF 148 (383)
T ss_dssp ECSSCT--TEEEEEEBTSCEEEEETTSTTC--------E--EEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEET
T ss_pred ECCCCC--CEEEEEcCCCeEEEEeCCCccc--------c--eeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEEC
Confidence 366552 3557777899999999863211 1 1111123445799999999888888888764 3444444
Q ss_pred cCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEeecC
Q psy11311 447 TSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLR 496 (499)
Q Consensus 447 ~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs 496 (499)
. +. ... .+.........|..+.|-|..+ .|+..+ ...|+|||+.
T Consensus 149 ~--~~-~~~--~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~ 193 (383)
T 3ei3_B 149 S--GS-VIQ--VFAKTDSWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGLD 193 (383)
T ss_dssp T--SC-EEE--EEECCCCSSCCEEEEEEETTTT-EEEEEETTSEEEEEETT
T ss_pred C--CC-ceE--EEeccCCCCCCeEEEEECCCCC-EEEEECCCCCEEEEECC
Confidence 4 44 111 1111111247899999999877 455444 5689999984
No 30
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=94.98 E-value=0.34 Score=44.53 Aligned_cols=112 Identities=18% Similarity=0.260 Sum_probs=66.9
Q ss_pred eccCcccccceEEEEeecCCeEEEeehhhhccccccccccccccccccccc-------ceeEEEeeecCCCcceeeeecc
Q psy11311 366 ILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSL-------PITILSVEANPCNEELLAVCGL 438 (499)
Q Consensus 366 ~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~V-------pF~Vlsl~~NP~ne~~LAV~Gl 438 (499)
+-.+|.| ++|+..+.|.|.|+++..- +++..... .-.|.+|+++|.. ++||+++.
T Consensus 192 ~~~~~~~----~l~~~~~dg~i~i~d~~~~-------------~~~~~~~~~~~h~~~~~~i~~i~~~~~~-~~l~~~~~ 253 (397)
T 1sq9_A 192 VDISERG----LIATGFNNGTVQISELSTL-------------RPLYNFESQHSMINNSNSIRSVKFSPQG-SLLAIAHD 253 (397)
T ss_dssp EEECTTS----EEEEECTTSEEEEEETTTT-------------EEEEEEECCC---CCCCCEEEEEECSST-TEEEEEEE
T ss_pred EEECCCc----eEEEEeCCCcEEEEECCCC-------------ceeEEEeccccccccCCccceEEECCCC-CEEEEEec
Confidence 3336655 4478789999999998541 11111111 5578899999964 67776665
Q ss_pred ce--eEEEEecC-CCCcccceeeeccc--------cCCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 439 KE--CIVFSFTS-GMSQATDSITINPH--------CETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 439 ke--C~Vlti~~-~G~~v~d~l~i~l~--------l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
.. ..|..++- .|+ ....+..... ......|..+.|-|..+ .|+... ...|+|||+..
T Consensus 254 d~~~g~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~ 322 (397)
T 1sq9_A 254 SNSFGCITLYETEFGE-RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE-TLCSAGWDGKLRFWDVKT 322 (397)
T ss_dssp ETTEEEEEEEETTTCC-EEEEECBC--------CCBSBSSCEEEEEECSSSS-EEEEEETTSEEEEEETTT
T ss_pred CCCCceEEEEECCCCc-ccceeccCcccccccccccccCCcEEEEEECCCCC-EEEEEeCCCeEEEEEcCC
Confidence 30 44444443 344 2222211000 00357899999999866 455555 55799999864
No 31
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=94.81 E-value=0.42 Score=44.64 Aligned_cols=109 Identities=17% Similarity=0.267 Sum_probs=66.4
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEec
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSFT 447 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti~ 447 (499)
||.|+ ++|.+...+.|.|.++..- +...+..-...-.-.|.+|+++|.. ++||.+|.. ...|..++
T Consensus 25 sp~g~---~las~~~D~~i~iw~~~~~---------~~~~~~~~~~~h~~~v~~~~~sp~g-~~l~s~s~D~~v~iw~~~ 91 (345)
T 3fm0_A 25 NPAGT---LLASCGGDRRIRIWGTEGD---------SWICKSVLSEGHQRTVRKVAWSPCG-NYLASASFDATTCIWKKN 91 (345)
T ss_dssp CTTSS---CEEEEETTSCEEEEEEETT---------EEEEEEEECSSCSSCEEEEEECTTS-SEEEEEETTSCEEEEEEC
T ss_pred CCCCC---EEEEEcCCCeEEEEEcCCC---------cceeeeeeccccCCcEEEEEECCCC-CEEEEEECCCcEEEEEcc
Confidence 77663 4477788999999987421 0000111111233468899999954 788888865 45555555
Q ss_pred CCCCcccceeeeccccC-CCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 448 SGMSQATDSITINPHCE-TSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 448 ~~G~~v~d~l~i~l~l~-~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
.. . ...-..+. -...|..+.|-|..+ .||... ...|+|||+..
T Consensus 92 ~~-~-----~~~~~~~~~h~~~v~~v~~sp~~~-~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 92 QD-D-----FECVTTLEGHENEVKSVAWAPSGN-LLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp CC-------EEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEECT
T ss_pred CC-C-----eEEEEEccCCCCCceEEEEeCCCC-EEEEEECCCeEEEEECCC
Confidence 42 2 11111222 257899999999866 455444 46899999864
No 32
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=94.78 E-value=0.33 Score=43.29 Aligned_cols=109 Identities=15% Similarity=0.092 Sum_probs=63.5
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecC
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTS 448 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~ 448 (499)
+|.|+ ++|++...+.|.|.++...- ++......-.|..+.++|.+ +++++|. +-.|...+-
T Consensus 224 s~~~~---~l~s~s~Dg~i~iwd~~~~~-------------~~~~~~~~~~v~~~~~~~~~--~~~~~~~-d~~i~iwd~ 284 (340)
T 4aow_A 224 SPDGS---LCASGGKDGQAMLWDLNEGK-------------HLYTLDGGDIINALCFSPNR--YWLCAAT-GPSIKIWDL 284 (340)
T ss_dssp CTTSS---EEEEEETTCEEEEEETTTTE-------------EEEEEECSSCEEEEEECSSS--SEEEEEE-TTEEEEEET
T ss_pred CCCCC---EEEEEeCCCeEEEEEeccCc-------------eeeeecCCceEEeeecCCCC--ceeeccC-CCEEEEEEC
Confidence 66553 55777899999999885421 11111223357888898854 4444443 444555554
Q ss_pred CCCcccceeeeccccC----CCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 449 GMSQATDSITINPHCE----TSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 449 ~G~~v~d~l~i~l~l~----~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
++......+.-+.... ....|..+.|-|..+ .|+... ...|+|||++.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~-~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 285 EGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQ-TLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp TTTEEEEEECCC-------CCCCCEEEEEECTTSS-EEEEEETTSCEEEEEEEC
T ss_pred CCCeEEEeccccceeeeccCCCCCEEEEEECCCCC-EEEEEeCCCEEEEEeCCC
Confidence 4432333332222111 256799999999876 455444 46899999975
No 33
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.76 E-value=0.33 Score=44.80 Aligned_cols=101 Identities=8% Similarity=0.093 Sum_probs=66.5
Q ss_pred ceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecC-CCCcc
Q psy11311 375 QHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTS-GMSQA 453 (499)
Q Consensus 375 q~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~-~G~~v 453 (499)
++|++...+.+.|.++++..- + .+......-.+.+++++|.. ++|+|+|-.+..|..++. .|+ +
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~-------~------~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~d~~i~v~d~~~~~-~ 66 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSN-------K------VTATIPVGSNPMGAVISPDG-TKVYVANAHSNDVSIIDTATNN-V 66 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTT-------E------EEEEEECSSSEEEEEECTTS-SEEEEEEGGGTEEEEEETTTTE-E
T ss_pred CEEEEEcCCCCEEEEEECCCC-------e------EEEEeecCCCcceEEECCCC-CEEEEECCCCCeEEEEECCCCe-E
Confidence 345566668899999988431 0 11111122347899999966 678788877778887875 454 3
Q ss_pred cceeeeccccCCCceeEeeEEecCCCceEEEee--cCceEEeecCC
Q psy11311 454 TDSITINPHCETSNYIIKALWIPGRQSTLAIVT--ALNIKIYQLRP 497 (499)
Q Consensus 454 ~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT--~~fVKIYDLs~ 497 (499)
...+. .+..+..+.|-|..+ .|+++. ...|+|||+..
T Consensus 67 ~~~~~------~~~~v~~~~~spdg~-~l~~~~~~~~~v~v~d~~~ 105 (391)
T 1l0q_A 67 IATVP------AGSSPQGVAVSPDGK-QVYVTNMASSTLSVIDTTS 105 (391)
T ss_dssp EEEEE------CSSSEEEEEECTTSS-EEEEEETTTTEEEEEETTT
T ss_pred EEEEE------CCCCccceEECCCCC-EEEEEECCCCEEEEEECCC
Confidence 32222 234889999999866 566665 36899999874
No 34
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=94.74 E-value=0.43 Score=43.20 Aligned_cols=110 Identities=15% Similarity=0.177 Sum_probs=65.2
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEec
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSFT 447 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti~ 447 (499)
+|.| + ++|++.+.+.|.|.++..--. ..+......+-.-.|.+|+++|. .++||+++.. ...|+.+.
T Consensus 105 ~~~~--~-~l~~~~~d~~v~i~d~~~~~~--------~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 105 APNE--K-KFAVGSGSRVISICYFEQEND--------WWVCKHIKKPIRSTVLSLDWHPN-SVLLAAGSCDFKCRIFSAY 172 (372)
T ss_dssp CTTS--S-EEEEEETTSSEEEEEEETTTT--------EEEEEEECTTCCSCEEEEEECTT-SSEEEEEETTSCEEEEECC
T ss_pred CCCC--C-EEEEEeCCCEEEEEEecCCCc--------ceeeeeeecccCCCeeEEEEcCC-CCEEEEEcCCCCEEEEEcc
Confidence 5654 3 447778999999988743210 00111111223457899999994 4677776654 34555543
Q ss_pred C-----------------CCCcccceeeeccccCCCceeEeeEEecCCCceEEEeec-CceEEeecCC
Q psy11311 448 S-----------------GMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTA-LNIKIYQLRP 497 (499)
Q Consensus 448 ~-----------------~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~-~fVKIYDLs~ 497 (499)
. .|. ..-.+. .....|..+.|-|..+ .|+.... ..|+|||+..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~ 233 (372)
T 1k8k_C 173 IKEVEERPAPTPWGSKMPFGE-----LMFESS-SSCGWVHGVCFSANGS-RVAWVSHDSTVCLADADK 233 (372)
T ss_dssp CTTTSCCCCCBTTBSCCCTTC-----EEEECC-CCSSCEEEEEECSSSS-EEEEEETTTEEEEEEGGG
T ss_pred cccccccccccccccccchhh-----heEecC-CCCCeEEEEEECCCCC-EEEEEeCCCEEEEEECCC
Confidence 2 222 222222 2357899999999876 5555554 4799999863
No 35
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=94.74 E-value=0.34 Score=43.84 Aligned_cols=109 Identities=14% Similarity=0.261 Sum_probs=67.8
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEec
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSFT 447 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti~ 447 (499)
+|.| .++|++...+.|.|.++..-- . ..+..+. .-.-.|.+|+++| +.++||+++.. ...|+.+.
T Consensus 17 s~~~---~~l~~~~~d~~v~i~~~~~~~------~--~~~~~~~--~h~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 17 NKDR---TQIAICPNNHEVHIYEKSGNK------W--VQVHELK--EHNGQVTGVDWAP-DSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp CTTS---SEEEEECSSSEEEEEEEETTE------E--EEEEEEE--CCSSCEEEEEEET-TTTEEEEEETTSCEEEEEEE
T ss_pred CCCC---CEEEEEeCCCEEEEEeCCCCc------E--Eeeeeec--CCCCcccEEEEeC-CCCEEEEEcCCCeEEEEECC
Confidence 5654 355887799999999875320 0 0011111 2345789999999 55788887764 45666654
Q ss_pred CCCCcccceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 448 SGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 448 ~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
. |+ ....+.+ ...+..|..+.|-|..+ .|++.+ +..|+|||+..
T Consensus 83 ~-~~-~~~~~~~---~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~d~~~ 127 (372)
T 1k8k_C 83 G-RT-WKPTLVI---LRINRAARCVRWAPNEK-KFAVGSGSRVISICYFEQ 127 (372)
T ss_dssp T-TE-EEEEEEC---CCCSSCEEEEEECTTSS-EEEEEETTSSEEEEEEET
T ss_pred C-Ce-eeeeEEe---ecCCCceeEEEECCCCC-EEEEEeCCCEEEEEEecC
Confidence 3 33 1111111 12367799999999866 566665 46899999865
No 36
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=94.72 E-value=0.2 Score=47.46 Aligned_cols=109 Identities=14% Similarity=0.214 Sum_probs=67.4
Q ss_pred CcccccceEEEEee--cCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEe
Q psy11311 369 SPQSKRQHLVAVSH--EKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSF 446 (499)
Q Consensus 369 sp~g~rq~LvAVsh--Ek~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti 446 (499)
+|.| ..|+|+.. ..+.|.++++..- +++.....+-.|.+++++|....+++.+|..+..|..+
T Consensus 268 ~p~~--~~ll~~~~gs~d~~i~i~d~~~~-------------~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~ 332 (401)
T 4aez_A 268 CPWQ--SNLLATGGGTMDKQIHFWNAATG-------------ARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIW 332 (401)
T ss_dssp CTTS--TTEEEEECCTTTCEEEEEETTTC-------------CEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEE
T ss_pred CCCC--CCEEEEecCCCCCEEEEEECCCC-------------CEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEE
Confidence 5655 34657654 6899999998531 11111223456999999998755555558777666666
Q ss_pred cCCCCcccceeeeccccC-CCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 447 TSGMSQATDSITINPHCE-TSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 447 ~~~G~~v~d~l~i~l~l~-~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
+-... +......+. ....|..+.|-|..+ .|+..+ ...|+|||+..
T Consensus 333 ~~~~~----~~~~~~~~~~h~~~v~~~~~s~dg~-~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 333 SYSSS----GLTKQVDIPAHDTRVLYSALSPDGR-ILSTAASDENLKFWRVYD 380 (401)
T ss_dssp EEETT----EEEEEEEEECCSSCCCEEEECTTSS-EEEEECTTSEEEEEECCC
T ss_pred ecCCc----cceeEEEecCCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCC
Confidence 54332 111111122 256789999999866 455544 56899999864
No 37
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=94.72 E-value=0.31 Score=45.19 Aligned_cols=104 Identities=16% Similarity=0.131 Sum_probs=65.7
Q ss_pred eEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecCCCCcccc
Q psy11311 376 HLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTSGMSQATD 455 (499)
Q Consensus 376 ~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~~G~~v~d 455 (499)
+++|++...+.|.|.++.. + . ...+. ........|.+++++|.. ++||+++ .+..|..++-+|+ ...
T Consensus 132 ~~l~s~~~d~~i~iwd~~~--~----~--~~~~~--~~~~~~~~v~~~~~~~~~-~~l~~~~-~d~~i~i~d~~~~-~~~ 198 (383)
T 3ei3_B 132 NQLFVSSIRGATTLRDFSG--S----V--IQVFA--KTDSWDYWYCCVDVSVSR-QMLATGD-STGRLLLLGLDGH-EIF 198 (383)
T ss_dssp EEEEEEETTTEEEEEETTS--C----E--EEEEE--CCCCSSCCEEEEEEETTT-TEEEEEE-TTSEEEEEETTSC-EEE
T ss_pred CEEEEEeCCCEEEEEECCC--C----c--eEEEe--ccCCCCCCeEEEEECCCC-CEEEEEC-CCCCEEEEECCCC-EEE
Confidence 3447777999999999863 1 0 01111 112233568899999965 5666554 4556666665666 222
Q ss_pred eeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 456 SITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 456 ~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
.+ . .....|..+.|-|..+..|+... ...|+|||+..
T Consensus 199 ~~----~-~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 199 KE----K-LHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp EE----E-CSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred Ee----c-cCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 22 2 13578999999999875565555 45899999974
No 38
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=94.71 E-value=0.28 Score=48.69 Aligned_cols=111 Identities=22% Similarity=0.313 Sum_probs=70.9
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecC
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTS 448 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~ 448 (499)
+|.+ .+++|.+...|.|.|.++..-. ..+ ......-.|.+++++|. .++||+.+ .+-.|..++.
T Consensus 158 ~p~~--~~~las~s~Dg~v~iwD~~~~~---------~~~---~~~~~~~~v~~v~wspd-g~~lasgs-~dg~v~iwd~ 221 (434)
T 2oit_A 158 NPTV--PSMVAVCLADGSIAVLQVTETV---------KVC---ATLPSTVAVTSVCWSPK-GKQLAVGK-QNGTVVQYLP 221 (434)
T ss_dssp CSSC--TTEEEEEETTSCEEEEEESSSE---------EEE---EEECGGGCEEEEEECTT-SSCEEEEE-TTSCEEEECT
T ss_pred CCCC--CCEEEEEECCCeEEEEEcCCCc---------cee---eccCCCCceeEEEEcCC-CCEEEEEc-CCCcEEEEcc
Confidence 5643 3455777799999999985421 000 11112346899999997 57888776 5666777777
Q ss_pred CCCcccceeeeccccCC--CceeEeeEEecCCCceEEEeecC--------ceEEeecCC
Q psy11311 449 GMSQATDSITINPHCET--SNYIIKALWIPGRQSTLAIVTAL--------NIKIYQLRP 497 (499)
Q Consensus 449 ~G~~v~d~l~i~l~l~~--~~fIik~~Wipgsq~~LAVvT~~--------fVKIYDLs~ 497 (499)
+|+ ....+..++..+. ...+..+.|.+... .|++.++. .|+|||+.+
T Consensus 222 ~~~-~~~~~~~~~~~~~~~~~~v~~v~w~~~~~-~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 222 TLQ-EKKVIPCPPFYESDHPVRVLDVLWIGTYV-FAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp TCC-EEEEECCCTTCCTTSCEEEEEEEEEETTE-EEEEEEETTCCSSSCCEEEEEECCC
T ss_pred CCc-ccccccCCcccCCCCceeEEEEEEecCce-EEEEEccCCCccCCCCceEEEEecc
Confidence 776 4444555554442 34899999998644 34333333 399999975
No 39
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=94.58 E-value=0.21 Score=50.71 Aligned_cols=114 Identities=15% Similarity=0.144 Sum_probs=72.5
Q ss_pred eeeeeeccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccce
Q psy11311 361 RTCMCILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKE 440 (499)
Q Consensus 361 R~amc~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glke 440 (499)
-.+|++ +-+.+|+|++ -.+++.|..+..|.+...++... +.+.-..++|- |.+|+| ++++|+|+ ++
T Consensus 40 ~nlLai-----s~~~gll~a~-~~~~l~v~~~~~l~~~~~~~~~~--~~~~~~~~lp~-V~~l~f---d~~~L~v~--~~ 105 (388)
T 1xip_A 40 LQNLDI-----SNSKSLFVAA-SGSKAVVGELQLLRDHITSDSTP--LTFKWEKEIPD-VIFVCF---HGDQVLVS--TR 105 (388)
T ss_dssp CBCEEE-----ETTTTEEEEE-ETTEEEEEEHHHHHHHHHSSSCC--CCCSEEEECTT-EEEEEE---ETTEEEEE--ES
T ss_pred ccEEEE-----cCCCCEEEEe-CCCEEEEEEhhHhhhhhcccccc--ccceEEeeCCC-eeEEEE---CCCEEEEE--cC
Confidence 455565 2345565775 55788899999998644433333 55555667888 999999 88999999 65
Q ss_pred eEEEEec--CCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecCceEEeecCC
Q psy11311 441 CIVFSFT--SGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLRP 497 (499)
Q Consensus 441 C~Vlti~--~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~ 497 (499)
..|..++ +..+ .. .+. ..+ .-+..+.|++.+ -+++.++..|.||||..
T Consensus 106 ~~l~v~dv~sl~~-~~-~~~---~~~--~~v~~i~~~~p~--~av~~~dG~L~v~dl~~ 155 (388)
T 1xip_A 106 NALYSLDLEELSE-FR-TVT---SFE--KPVFQLKNVNNT--LVILNSVNDLSALDLRT 155 (388)
T ss_dssp SEEEEEESSSTTC-EE-EEE---ECS--SCEEEEEECSSE--EEEEETTSEEEEEETTT
T ss_pred CcEEEEEchhhhc-cC-ccc---eee--cceeeEEecCCC--EEEEECCCCEEEEEccC
Confidence 5565554 3222 11 111 112 125677888773 34445678899999974
No 40
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=94.52 E-value=0.53 Score=42.42 Aligned_cols=110 Identities=12% Similarity=0.160 Sum_probs=68.6
Q ss_pred eEEEEeecCCeEEEeehhhhccccccccccccc-ccccccccceeEEEeeecCCC--cceeeeeccc-eeEEEEecCCCC
Q psy11311 376 HLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTL-IKLASVSLPITILSVEANPCN--EELLAVCGLK-ECIVFSFTSGMS 451 (499)
Q Consensus 376 ~LvAVshEk~KVtllqls~LLkqadss~~Kltl-~rLs~~~VpF~Vlsl~~NP~n--e~~LAV~Glk-eC~Vlti~~~G~ 451 (499)
.++|+..+.|.|.|.++..--. ...+ ..+. .-.-.|.+|+++|.. .++||++|.. ...|+.+.....
T Consensus 173 ~~l~~~~~dg~i~i~d~~~~~~-------~~~~~~~~~--~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~ 243 (379)
T 3jrp_A 173 RKFVTGGADNLVKIWKYNSDAQ-------TYVLESTLE--GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQG 243 (379)
T ss_dssp CEEEEEETTSCEEEEEEETTTT-------EEEEEEEEC--CCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS
T ss_pred CEEEEEeCCCeEEEEEecCCCc-------ceeeEEEEe--cccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCc
Confidence 3447777999999998853110 0000 1111 123468899999986 6888888876 466777766433
Q ss_pred cccceeeeccccCCCceeEeeEEecCCCceEEEe-ecCceEEeecCC
Q psy11311 452 QATDSITINPHCETSNYIIKALWIPGRQSTLAIV-TALNIKIYQLRP 497 (499)
Q Consensus 452 ~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVv-T~~fVKIYDLs~ 497 (499)
... ..+.........|..+.|-|..+ .|+.. ....|+|||+..
T Consensus 244 -~~~-~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 244 -PWK-KTLLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKENL 287 (379)
T ss_dssp -CCE-EEESSSSCCSSCEEEEEECSSSC-CEEEEESSSSEEEEEEEE
T ss_pred -cce-eeeeccccCCCcEEEEEEcCCCC-EEEEecCCCcEEEEeCCC
Confidence 111 12222222367899999999877 45554 456899999863
No 41
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=94.43 E-value=0.68 Score=43.56 Aligned_cols=110 Identities=11% Similarity=0.160 Sum_probs=67.0
Q ss_pred eEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccce-eEEEEecCCCCccc
Q psy11311 376 HLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKE-CIVFSFTSGMSQAT 454 (499)
Q Consensus 376 ~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glke-C~Vlti~~~G~~v~ 454 (499)
.++|++.+.|.|.|.++..--....... .+..+. .-.-.|..|+++|..+++||.+|... ..|.-+.. |+
T Consensus 95 ~~l~s~s~dg~v~vw~~~~~~~~~~~~~---~~~~~~--~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~-~~--- 165 (402)
T 2aq5_A 95 NVIASGSEDCTVMVWEIPDGGLVLPLRE---PVITLE--GHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGT-GA--- 165 (402)
T ss_dssp TEEEEEETTSEEEEEECCTTCCSSCBCS---CSEEEE--CCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTT-TE---
T ss_pred CEEEEEeCCCeEEEEEccCCCCccccCC---ceEEec--CCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCC-CC---
Confidence 3558888999999999854210000000 011111 12346889999999888888888653 44444443 44
Q ss_pred ceeeeccc-cCCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 455 DSITINPH-CETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 455 d~l~i~l~-l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
....+. ......|..+.|-|..+ .|+... ...|+|||+..
T Consensus 166 --~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~ 207 (402)
T 2aq5_A 166 --AVLTLGPDVHPDTIYSVDWSRDGA-LICTSCRDKRVRVIEPRK 207 (402)
T ss_dssp --EEEEECTTTCCSCEEEEEECTTSS-CEEEEETTSEEEEEETTT
T ss_pred --ccEEEecCCCCCceEEEEECCCCC-EEEEEecCCcEEEEeCCC
Confidence 222221 12357899999999765 455554 56899999864
No 42
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=94.41 E-value=0.54 Score=42.04 Aligned_cols=114 Identities=11% Similarity=0.144 Sum_probs=65.7
Q ss_pred eeccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEE
Q psy11311 365 CILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIV 443 (499)
Q Consensus 365 c~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~V 443 (499)
|+--+|.+..+.++|++.+.|.|.|.++..--. .+ ...+. .-.-.|.+|+++| +.++||+++.. ...|
T Consensus 44 ~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~-------~~-~~~~~--~h~~~v~~~~~~~-~~~~l~s~~~dg~v~i 112 (368)
T 3mmy_A 44 CLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ-------TI-PKAQQ--MHTGPVLDVCWSD-DGSKVFTASCDKTAKM 112 (368)
T ss_dssp EEEECCTTSSSEEEEEEETTSEEEEEEECTTSC-------EE-EEEEE--ECSSCEEEEEECT-TSSEEEEEETTSEEEE
T ss_pred EEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc-------ee-EEEec--cccCCEEEEEECc-CCCEEEEEcCCCcEEE
Confidence 333355532234558888999999999853100 00 01111 1234688999999 55788876654 2444
Q ss_pred EEecCCCCcccceeeeccccCCCceeEeeEEecCCCce-EEEee-cCceEEeecCC
Q psy11311 444 FSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQST-LAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 444 lti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~-LAVvT-~~fVKIYDLs~ 497 (499)
..+.. |+ + +.. ......|..+.|.|..... |+... ...|+|||+..
T Consensus 113 wd~~~-~~-~-----~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 160 (368)
T 3mmy_A 113 WDLSS-NQ-A-----IQI-AQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRS 160 (368)
T ss_dssp EETTT-TE-E-----EEE-EECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSC
T ss_pred EEcCC-CC-c-----eee-ccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCC
Confidence 44433 33 1 111 1236789999996655443 44443 46799999864
No 43
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=94.41 E-value=0.29 Score=46.37 Aligned_cols=110 Identities=13% Similarity=0.062 Sum_probs=65.1
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecC
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTS 448 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~ 448 (499)
+|.+. ..| +...+.+.|.|.++..-- . +..+....-.-.|.+|+++|.++.+||+.+. +..|..++-
T Consensus 190 s~~~~-~~~-~s~~~dg~v~~wd~~~~~--------~--~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~-d~~i~~wd~ 256 (357)
T 4g56_B 190 CPGKD-TIF-LSCGEDGRILLWDTRKPK--------P--ATRIDFCASDTIPTSVTWHPEKDDTFACGDE-TGNVSLVNI 256 (357)
T ss_dssp CTTCS-SCE-EEEETTSCEEECCTTSSS--------C--BCBCCCTTCCSCEEEEEECTTSTTEEEEEES-SSCEEEEES
T ss_pred ccCCC-cee-eeeccCCceEEEECCCCc--------e--eeeeeeccccccccchhhhhcccceEEEeec-ccceeEEEC
Confidence 55543 334 666788999999874210 0 1111112223457899999998877776554 444444433
Q ss_pred -CCCcccceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 449 -GMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 449 -~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
+|+ .. ..+.. ....|..+.|-|.....||... ...|+|||+..
T Consensus 257 ~~~~-~~----~~~~~-~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~ 301 (357)
T 4g56_B 257 KNPD-SA----QTSAV-HSQNITGLAYSYHSSPFLASISEDCTVAVLDADF 301 (357)
T ss_dssp SCGG-GC----EEECC-CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS
T ss_pred CCCc-Ee----EEEec-cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC
Confidence 233 22 12222 2567999999987655666554 46899999864
No 44
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=94.31 E-value=0.46 Score=45.30 Aligned_cols=111 Identities=14% Similarity=0.154 Sum_probs=65.0
Q ss_pred cCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEec
Q psy11311 368 SSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFT 447 (499)
Q Consensus 368 ~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~ 447 (499)
.+|.+.+ ++|...+.+.|-|.++..- + .+..+....-...|.+++++|.+.++||..+ .+..|...+
T Consensus 177 ~~~~~~~--~l~s~s~D~~v~iwd~~~~-------~---~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~-~dg~v~~wd 243 (344)
T 4gqb_B 177 ASPHKDS--VFLSCSEDNRILLWDTRCP-------K---PASQIGCSAPGYLPTSLAWHPQQSEVFVFGD-ENGTVSLVD 243 (344)
T ss_dssp ECSSCTT--EEEEEETTSCEEEEETTSS-------S---CEEECC----CCCEEEEEECSSCTTEEEEEE-TTSEEEEEE
T ss_pred ecCCCCC--ceeeecccccccccccccc-------c---eeeeeecceeeccceeeeecCCCCcceEEec-cCCcEEEEE
Confidence 3666643 3355568899999987421 0 1122222333456889999998877776554 444444444
Q ss_pred CC-CCcccceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 448 SG-MSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 448 ~~-G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
-+ |+ .. ..+.- -...|..+.|-|.....||-.. ...|+|||+..
T Consensus 244 ~~~~~-~~----~~~~~-h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~ 289 (344)
T 4gqb_B 244 TKSTS-CV----LSSAV-HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL 289 (344)
T ss_dssp SCC---CC----EEEEC-CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTC
T ss_pred CCCCc-EE----EEEcC-CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCC
Confidence 32 44 22 22221 2567999999998665666544 46799999874
No 45
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=94.30 E-value=0.18 Score=44.90 Aligned_cols=110 Identities=15% Similarity=0.131 Sum_probs=64.4
Q ss_pred CcccccceEEEEeecC-CeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccce--eEEEE
Q psy11311 369 SPQSKRQHLVAVSHEK-GKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKE--CIVFS 445 (499)
Q Consensus 369 sp~g~rq~LvAVshEk-~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glke--C~Vlt 445 (499)
||.|+ .| +++..+ ++|.++++.. +. -+++.+.....+..+..|+++|.. ++|+|++..+ ..|+.
T Consensus 46 spdg~--~l-~~~~~~~~~v~~~~~~~-----~~----~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~i~~~d 112 (343)
T 1ri6_A 46 SPDKR--YL-YVGVRPEFRVLAYRIAP-----DD----GALTFAAESALPGSLTHISTDHQG-QFVFVGSYNAGNVSVTR 112 (343)
T ss_dssp CTTSS--EE-EEEETTTTEEEEEEECT-----TT----CCEEEEEEEECSSCCSEEEECTTS-SEEEEEETTTTEEEEEE
T ss_pred CCCCC--EE-EEeecCCCeEEEEEecC-----CC----CceeeccccccCCCCcEEEEcCCC-CEEEEEecCCCeEEEEE
Confidence 67664 35 555555 8999988741 00 011222222223356788899866 6788887755 45555
Q ss_pred ecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEe--ecCceEEeecCC
Q psy11311 446 FTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIV--TALNIKIYQLRP 497 (499)
Q Consensus 446 i~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVv--T~~fVKIYDLs~ 497 (499)
++ +|. .. .+.-....+..+..+.|-|..+ .|+++ ....|.+||+..
T Consensus 113 ~~-~~~-~~---~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 113 LE-DGL-PV---GVVDVVEGLDGCHSANISPDNR-TLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp EE-TTE-EE---EEEEEECCCTTBCCCEECTTSS-EEEEEEGGGTEEEEEEECT
T ss_pred CC-CCc-cc---cccccccCCCCceEEEECCCCC-EEEEecCCCCEEEEEEecC
Confidence 54 443 11 1111223345678899999866 45555 358899999975
No 46
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.28 E-value=0.53 Score=43.44 Aligned_cols=110 Identities=9% Similarity=0.143 Sum_probs=69.1
Q ss_pred eeccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEE
Q psy11311 365 CILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVF 444 (499)
Q Consensus 365 c~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vl 444 (499)
++-.+|.|+ .|++.....+.|.++++..- +.+.....+-.|.+++++|.+ ++|+++|..+-.|.
T Consensus 36 ~~~~s~dg~--~l~~~~~~d~~i~v~d~~~~-------------~~~~~~~~~~~v~~~~~spdg-~~l~~~~~~~~~v~ 99 (391)
T 1l0q_A 36 GAVISPDGT--KVYVANAHSNDVSIIDTATN-------------NVIATVPAGSSPQGVAVSPDG-KQVYVTNMASSTLS 99 (391)
T ss_dssp EEEECTTSS--EEEEEEGGGTEEEEEETTTT-------------EEEEEEECSSSEEEEEECTTS-SEEEEEETTTTEEE
T ss_pred eEEECCCCC--EEEEECCCCCeEEEEECCCC-------------eEEEEEECCCCccceEECCCC-CEEEEEECCCCEEE
Confidence 444477664 45344447889999987421 011112223378899999965 68888998877777
Q ss_pred EecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEee--cCceEEeecCC
Q psy11311 445 SFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT--ALNIKIYQLRP 497 (499)
Q Consensus 445 ti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT--~~fVKIYDLs~ 497 (499)
.++....++...+. .+..+..+.|-|..+ .|+++. ...|+|||+..
T Consensus 100 v~d~~~~~~~~~~~------~~~~~~~~~~s~dg~-~l~~~~~~~~~v~~~d~~~ 147 (391)
T 1l0q_A 100 VIDTTSNTVAGTVK------TGKSPLGLALSPDGK-KLYVTNNGDKTVSVINTVT 147 (391)
T ss_dssp EEETTTTEEEEEEE------CSSSEEEEEECTTSS-EEEEEETTTTEEEEEETTT
T ss_pred EEECCCCeEEEEEe------CCCCcceEEECCCCC-EEEEEeCCCCEEEEEECCC
Confidence 77765431322221 244578899999866 344443 57899999864
No 47
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=94.26 E-value=1 Score=40.22 Aligned_cols=110 Identities=13% Similarity=0.130 Sum_probs=68.0
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc------eeE
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK------ECI 442 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk------eC~ 442 (499)
+|.| ..| |++...|.|.|.++..- +.+.....+..|.+++++|.. ++|++++.. ...
T Consensus 83 ~~~~--~~l-~s~~~dg~i~iwd~~~~-------------~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~~~~g~i~ 145 (369)
T 3zwl_B 83 DCFT--KYC-VTGSADYSIKLWDVSNG-------------QCVATWKSPVPVKRVEFSPCG-NYFLAILDNVMKNPGSIN 145 (369)
T ss_dssp CTTS--SEE-EEEETTTEEEEEETTTC-------------CEEEEEECSSCEEEEEECTTS-SEEEEEECCBTTBCCEEE
T ss_pred cCCC--CEE-EEEeCCCeEEEEECCCC-------------cEEEEeecCCCeEEEEEccCC-CEEEEecCCccCCCCEEE
Confidence 5644 344 77779999999998421 112222256679999999966 667766653 677
Q ss_pred EEEecCCCCcccceeeecccc-------CCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 443 VFSFTSGMSQATDSITINPHC-------ETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 443 Vlti~~~G~~v~d~l~i~l~l-------~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
|+.+..... +..-....... .....|..+.|-|..+ .|++.+ ...|+|||+..
T Consensus 146 ~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~ 206 (369)
T 3zwl_B 146 IYEIERDSA-THELTKVSEEPIHKIITHEGLDAATVAGWSTKGK-YIIAGHKDGKISKYDVSN 206 (369)
T ss_dssp EEEEEECTT-TCCEEEECSSCSEEEECCTTCCCEEEEEECGGGC-EEEEEETTSEEEEEETTT
T ss_pred EEEecCCcc-ceeecccccceeeeccCCcCccceeEEEEcCCCC-EEEEEcCCCEEEEEECCC
Confidence 777766543 22111111100 0123899999999866 455544 46799999975
No 48
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=94.24 E-value=0.96 Score=41.16 Aligned_cols=115 Identities=16% Similarity=0.255 Sum_probs=69.1
Q ss_pred cCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCC------------cceeee
Q psy11311 368 SSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCN------------EELLAV 435 (499)
Q Consensus 368 ~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~n------------e~~LAV 435 (499)
-+|+.....| |++...+.|.|.++..-- ... +.....-...|.+++++|.. .++||.
T Consensus 107 ~~p~~~g~~l-~s~s~d~~v~~wd~~~~~-----~~~-----~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~s 175 (297)
T 2pm7_B 107 WAPHEYGPML-LVASSDGKVSVVEFKENG-----TTS-----PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVT 175 (297)
T ss_dssp ECCGGGCSEE-EEEETTSEEEEEEBCSSS-----CBC-----CEEEECCSSCEEEEEECCCC------------CCEEEE
T ss_pred eCcCCCCcEE-EEEECCCcEEEEEecCCC-----cee-----eeeeecccCccceEeecCCcccccccCCCCCCcceEEE
Confidence 3665333445 777799999999875310 000 11112234568899999863 467887
Q ss_pred eccc-eeEEEEecCCCCcccceeeeccccC-CCceeEeeEEecCC--CceEEEee-cCceEEeecCC
Q psy11311 436 CGLK-ECIVFSFTSGMSQATDSITINPHCE-TSNYIIKALWIPGR--QSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 436 ~Glk-eC~Vlti~~~G~~v~d~l~i~l~l~-~~~fIik~~Wipgs--q~~LAVvT-~~fVKIYDLs~ 497 (499)
+|.. ..+|..++.... ...+.-.+. -...|..+.|-|.. ...||... ...|+|||+..
T Consensus 176 gs~D~~v~lwd~~~~~~----~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 176 GGADNLVKIWKYNSDAQ----TYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp EETTSCEEEEEEETTTT----EEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred EcCCCcEEEEEEcCCCc----eEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 7765 456666655322 111222233 25789999999974 23565554 45899999864
No 49
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=94.24 E-value=0.51 Score=43.32 Aligned_cols=116 Identities=18% Similarity=0.152 Sum_probs=68.1
Q ss_pred eeccCcccccceEEEEeecCCeEEEeehhhhccccccccccc-ccccccccccceeEEEeeecCCCcceeeeeccc-eeE
Q psy11311 365 CILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKL-TLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECI 442 (499)
Q Consensus 365 c~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kl-tl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~ 442 (499)
|+--+|.|+ .| |++.+.+.|.|.++..-- +. .++.+. .+-.-.|.+|+++|. .++||+++.. ..+
T Consensus 105 ~~~~~~~~~--~l-~~~~~d~~i~iwd~~~~~--------~~~~~~~~~-~~h~~~v~~~~~~~~-~~~l~~~~~d~~i~ 171 (377)
T 3dwl_C 105 FVRWSPNED--KF-AVGSGARVISVCYFEQEN--------DWWVSKHLK-RPLRSTILSLDWHPN-NVLLAAGCADRKAY 171 (377)
T ss_dssp EEECCTTSS--CC-EEEESSSCEEECCC-------------CCCCEEEC-SSCCSCEEEEEECTT-SSEEEEEESSSCEE
T ss_pred EEEECCCCC--EE-EEEecCCeEEEEEECCcc--------cceeeeEee-cccCCCeEEEEEcCC-CCEEEEEeCCCEEE
Confidence 333466553 45 676788999998874311 00 011111 123457899999994 4788877765 466
Q ss_pred EEEecCCCCcc-------------cceeeeccccCCCceeEeeEEecCCCceEEEeec-CceEEeecCC
Q psy11311 443 VFSFTSGMSQA-------------TDSITINPHCETSNYIIKALWIPGRQSTLAIVTA-LNIKIYQLRP 497 (499)
Q Consensus 443 Vlti~~~G~~v-------------~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~-~fVKIYDLs~ 497 (499)
|+.+...+. . ..++...+ .....|..+.|-|..+ .||.... ..|+|||+..
T Consensus 172 iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~-~l~~~~~d~~i~iwd~~~ 236 (377)
T 3dwl_C 172 VLSAYVRDV-DAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGN-ALAYAGHDSSVTIAYPSA 236 (377)
T ss_dssp EEEECCSSC-C-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSS-CEEEEETTTEEC-CEECS
T ss_pred EEEEEeccc-CCCccccccccccchhhhhhcc--cCCceEEEEEECCCCC-EEEEEeCCCcEEEEECCC
Confidence 666653221 0 11222223 4467899999999876 5665554 5899999875
No 50
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=94.20 E-value=0.61 Score=41.17 Aligned_cols=109 Identities=12% Similarity=0.149 Sum_probs=66.9
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecC
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTS 448 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~ 448 (499)
+|.+.+.-.+|.....+.|-|.+.... ...........|..+.++|....+++..|..+..|...+-
T Consensus 205 ~~~~~~~~~~~~~~~~~~i~lwd~~~~-------------~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~ 271 (318)
T 4ggc_A 205 CPWQSNVLATGGGTSDRHIRIWNVCSG-------------ACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKY 271 (318)
T ss_dssp CTTSTTEEEEEECTTTCEEEEEETTTC-------------CEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEET
T ss_pred cCCCCcEEEEEecCCCCEEEEEecccc-------------cccccccceeeeeeeeecccccceEEEEEcCCCEEEEEEC
Confidence 454544333233334456777665322 1222234456688999999998888888988777666653
Q ss_pred -CCCcccceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 449 -GMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 449 -~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
+|+ ..- .+.- -...|..+.|-|..+ .||-.. ...|||||+.+
T Consensus 272 ~~~~-~~~----~l~g-H~~~V~~l~~spdg~-~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 272 PTMA-KVA----ELKG-HTSRVLSLTMSPDGA-TVASAAADETLRLWRCFE 315 (318)
T ss_dssp TTCC-EEE----EECC-CSSCEEEEEECTTSS-CEEEEETTTEEEEECCSC
T ss_pred CCCc-EEE----EEcC-CCCCEEEEEEcCCCC-EEEEEecCCeEEEEECCC
Confidence 344 221 2211 157899999999866 454443 45799999964
No 51
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=94.17 E-value=0.41 Score=42.65 Aligned_cols=114 Identities=15% Similarity=0.119 Sum_probs=65.5
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc--eeEEEEe
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK--ECIVFSF 446 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk--eC~Vlti 446 (499)
+|.|+ .|++...++++|.++++.. + .. .+.+......-.+..++++|.. ++|+|++.. ...++.+
T Consensus 92 s~dg~--~l~~~~~~~~~i~~~d~~~--~---~~-----~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~v~~~d~ 158 (343)
T 1ri6_A 92 DHQGQ--FVFVGSYNAGNVSVTRLED--G---LP-----VGVVDVVEGLDGCHSANISPDN-RTLWVPALKQDRICLFTV 158 (343)
T ss_dssp CTTSS--EEEEEETTTTEEEEEEEET--T---EE-----EEEEEEECCCTTBCCCEECTTS-SEEEEEEGGGTEEEEEEE
T ss_pred cCCCC--EEEEEecCCCeEEEEECCC--C---cc-----ccccccccCCCCceEEEECCCC-CEEEEecCCCCEEEEEEe
Confidence 66653 4534444578899999840 0 00 0111111122236678899866 567777644 4555556
Q ss_pred cCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEee--cCceEEeecCC
Q psy11311 447 TSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT--ALNIKIYQLRP 497 (499)
Q Consensus 447 ~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT--~~fVKIYDLs~ 497 (499)
...|. +............+..++.+.|-|..+ .|+++. +..|+|||+..
T Consensus 159 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~pdg~-~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 159 SDDGH-LVAQDPAEVTTVEGAGPRHMVFHPNEQ-YAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp CTTSC-EEEEEEEEEECSTTCCEEEEEECTTSS-EEEEEETTTTEEEEEESSC
T ss_pred cCCCc-eeeecccccccCCCCCcceEEECCCCC-EEEEEeCCCCEEEEEEecC
Confidence 65566 433221123334467788899999865 455554 56799999854
No 52
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=94.10 E-value=0.45 Score=45.05 Aligned_cols=101 Identities=13% Similarity=0.247 Sum_probs=66.1
Q ss_pred EEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeec-cceeEEEEecC-CCCccc
Q psy11311 377 LVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCG-LKECIVFSFTS-GMSQAT 454 (499)
Q Consensus 377 LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~G-lkeC~Vlti~~-~G~~v~ 454 (499)
++|++...+.|.|.++..-- ...++. .-.-.|.+|+++|.+..+|+++| -.+..|..++- .|. ..
T Consensus 231 ~l~s~~~d~~v~iwd~~~~~-------~~~~~~-----~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~-~~ 297 (401)
T 4aez_A 231 QLASGGNDNVVQIWDARSSI-------PKFTKT-----NHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA-RV 297 (401)
T ss_dssp EEEEEETTSCEEEEETTCSS-------EEEEEC-----CCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC-EE
T ss_pred EEEEEeCCCeEEEccCCCCC-------ccEEec-----CCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC-EE
Confidence 44787888999999986411 011111 12345789999999888888874 34555555553 244 22
Q ss_pred ceeeeccccCCCceeEeeEEecCCCceEEEee---cCceEEeecCC
Q psy11311 455 DSITINPHCETSNYIIKALWIPGRQSTLAIVT---ALNIKIYQLRP 497 (499)
Q Consensus 455 d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT---~~fVKIYDLs~ 497 (499)
-.+ ..+.-|..+.|-|... .|++++ ...|+|||+..
T Consensus 298 ~~~------~~~~~v~~~~~s~~~~-~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 298 NTV------DAGSQVTSLIWSPHSK-EIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp EEE------ECSSCEEEEEECSSSS-EEEEEECTTTCEEEEEEEET
T ss_pred EEE------eCCCcEEEEEECCCCC-eEEEEeecCCCcEEEEecCC
Confidence 211 2356799999999866 566654 78999999864
No 53
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=94.07 E-value=0.79 Score=40.53 Aligned_cols=105 Identities=12% Similarity=0.032 Sum_probs=64.5
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecC
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTS 448 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~ 448 (499)
+|.| ..| +++.+.|.|.++++...- .+.....+-.|.+++++|.. ++||+++.. -.|..++-
T Consensus 192 ~~~~--~~l-~~~~~dg~i~~~d~~~~~-------------~~~~~~~~~~v~~~~~s~~~-~~l~~~~~~-~~i~~~~~ 253 (337)
T 1gxr_A 192 SNDG--TKL-WTGGLDNTVRSWDLREGR-------------QLQQHDFTSQIFSLGYCPTG-EWLAVGMES-SNVEVLHV 253 (337)
T ss_dssp CTTS--SEE-EEEETTSEEEEEETTTTE-------------EEEEEECSSCEEEEEECTTS-SEEEEEETT-SCEEEEET
T ss_pred CCCC--CEE-EEEecCCcEEEEECCCCc-------------eEeeecCCCceEEEEECCCC-CEEEEEcCC-CcEEEEEC
Confidence 6654 344 777799999999985421 11112345568899999975 667666543 33444443
Q ss_pred CCCcccceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEeecCCC
Q psy11311 449 GMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRPE 498 (499)
Q Consensus 449 ~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~d 498 (499)
+.... .. +. .....|..+.|-|..+ .|+..+ ...|+|||+...
T Consensus 254 ~~~~~---~~--~~-~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~ 297 (337)
T 1gxr_A 254 NKPDK---YQ--LH-LHESCVLSLKFAYCGK-WFVSTGKDNLLNAWRTPYG 297 (337)
T ss_dssp TSSCE---EE--EC-CCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTC
T ss_pred CCCCe---EE--Ec-CCccceeEEEECCCCC-EEEEecCCCcEEEEECCCC
Confidence 33301 11 11 1357899999999876 455554 557999998753
No 54
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=94.04 E-value=0.67 Score=42.59 Aligned_cols=118 Identities=18% Similarity=0.227 Sum_probs=66.8
Q ss_pred CcccccceEEEEeecC---CeEEEeehhhhcccccccccccccc------cccccccceeEEEeeecCCCcceeeeeccc
Q psy11311 369 SPQSKRQHLVAVSHEK---GKITLLQLSGLLKQIDSSKRKLTLI------KLASVSLPITILSVEANPCNEELLAVCGLK 439 (499)
Q Consensus 369 sp~g~rq~LvAVshEk---~KVtllqls~LLkqadss~~Kltl~------rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk 439 (499)
+|.| . ++|++.+. |.|.|+++...- ....+... ++....-.-.|.+|+++|.. ++||++|..
T Consensus 242 ~~~~--~-~l~~~~~d~~~g~i~i~d~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d 312 (397)
T 1sq9_A 242 SPQG--S-LLAIAHDSNSFGCITLYETEFGE-----RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG-ETLCSAGWD 312 (397)
T ss_dssp CSST--T-EEEEEEEETTEEEEEEEETTTCC-----EEEEECBC--------CCBSBSSCEEEEEECSSS-SEEEEEETT
T ss_pred CCCC--C-EEEEEecCCCCceEEEEECCCCc-----ccceeccCcccccccccccccCCcEEEEEECCCC-CEEEEEeCC
Confidence 5654 3 44777787 899999986321 00111100 00000124578999999954 677777754
Q ss_pred -eeEEEEecCCCCcccceeeecccc-CC---------------CceeEeeEEecCCC---------ceEEEee-cCceEE
Q psy11311 440 -ECIVFSFTSGMSQATDSITINPHC-ET---------------SNYIIKALWIPGRQ---------STLAIVT-ALNIKI 492 (499)
Q Consensus 440 -eC~Vlti~~~G~~v~d~l~i~l~l-~~---------------~~fIik~~Wipgsq---------~~LAVvT-~~fVKI 492 (499)
...|+-+.. |+ ....+..+..- .. +..|..+.|.|..+ ..|+... ...|+|
T Consensus 313 g~i~iwd~~~-~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~i 390 (397)
T 1sq9_A 313 GKLRFWDVKT-KE-RITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRW 390 (397)
T ss_dssp SEEEEEETTT-TE-EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEE
T ss_pred CeEEEEEcCC-Cc-eeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEE
Confidence 344444433 44 33333321110 11 67899999999863 2455544 568999
Q ss_pred eecCC
Q psy11311 493 YQLRP 497 (499)
Q Consensus 493 YDLs~ 497 (499)
||+..
T Consensus 391 w~~~~ 395 (397)
T 1sq9_A 391 FREAG 395 (397)
T ss_dssp EEEEC
T ss_pred EEcCC
Confidence 99864
No 55
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=94.01 E-value=0.73 Score=42.81 Aligned_cols=109 Identities=12% Similarity=0.233 Sum_probs=65.3
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEec
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSFT 447 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti~ 447 (499)
+|.| + ++|.+...|.|-|.++..--. ..+++ . -.-.|..++++|.. ++||++|.. .+.|+.+.
T Consensus 64 s~d~--~-~l~s~s~Dg~v~iWd~~~~~~-------~~~~~-~----~~~~v~~~~~s~~~-~~l~s~~~d~~v~iw~~~ 127 (340)
T 1got_B 64 GTDS--R-LLLSASQDGKLIIWDSYTTNK-------VHAIP-L----RSSWVMTCAYAPSG-NYVACGGLDNICSIYNLK 127 (340)
T ss_dssp CTTS--S-EEEEEETTTEEEEEETTTCCE-------EEEEE-C----SSSCEEEEEECTTS-SEEEEEETTCEEEEEETT
T ss_pred CCCC--C-EEEEEeCCCcEEEEECCCCCc-------ceEee-c----CCccEEEEEECCCC-CEEEEEeCCCeEEEEECc
Confidence 5655 3 447777999999998743211 11111 1 12248899999964 788888876 45666655
Q ss_pred CCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecCceEEeecCC
Q psy11311 448 SGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLRP 497 (499)
Q Consensus 448 ~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~ 497 (499)
.... .-++.-.+.- ...+|..+.|.|+.+ .++-.....|+|||+..
T Consensus 128 ~~~~--~~~~~~~~~~-h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~ 173 (340)
T 1got_B 128 TREG--NVRVSRELAG-HTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIET 173 (340)
T ss_dssp TCSB--SCEEEEEEEC-CSSCEEEEEEEETTE-EEEEETTSCEEEEETTT
T ss_pred cCCC--cceeEEEecC-CCccEEEEEECCCCc-EEEEECCCcEEEEECCC
Confidence 4322 1111111211 257899999999865 33333456899999864
No 56
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=93.91 E-value=0.35 Score=45.23 Aligned_cols=78 Identities=17% Similarity=0.177 Sum_probs=49.3
Q ss_pred cceeEEEeeecCCCcceeeeeccceeEEEEecCC--CCcccceeeeccc-cC-CCceeEeeEEecCCCceEEEee-cCce
Q psy11311 416 LPITILSVEANPCNEELLAVCGLKECIVFSFTSG--MSQATDSITINPH-CE-TSNYIIKALWIPGRQSTLAIVT-ALNI 490 (499)
Q Consensus 416 VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~~--G~~v~d~l~i~l~-l~-~~~fIik~~Wipgsq~~LAVvT-~~fV 490 (499)
-.-.|.+|+++|. .++||.+ .+..|...+-+ +. ...-+.+.+. +. ....|..+.|-|.....|+..+ ...|
T Consensus 176 h~~~v~~~~~~~~-~~~l~s~--~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i 251 (447)
T 3dw8_B 176 HTYHINSISINSD-YETYLSA--DDLRINLWHLEITDR-SFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTI 251 (447)
T ss_dssp CSSCCCEEEECTT-SSEEEEE--CSSEEEEEETTEEEE-EEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCE
T ss_pred CCcceEEEEEcCC-CCEEEEe--CCCeEEEEECCCCCc-eeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeE
Confidence 3456889999995 5677765 46655555543 33 2222222221 22 2678999999998734566655 4579
Q ss_pred EEeecCC
Q psy11311 491 KIYQLRP 497 (499)
Q Consensus 491 KIYDLs~ 497 (499)
+|||+..
T Consensus 252 ~iwd~~~ 258 (447)
T 3dw8_B 252 RLCDMRA 258 (447)
T ss_dssp EEEETTT
T ss_pred EEEECcC
Confidence 9999865
No 57
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=93.90 E-value=0.76 Score=42.63 Aligned_cols=116 Identities=16% Similarity=0.183 Sum_probs=65.2
Q ss_pred cCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccc-cccceeEEEeeecCCCcceeeeeccc-eeEEEE
Q psy11311 368 SSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLAS-VSLPITILSVEANPCNEELLAVCGLK-ECIVFS 445 (499)
Q Consensus 368 ~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~-~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlt 445 (499)
-+|.|+ ++|.+...+.|-|.++..-.. +..+.+.+.. ..-.-.|.+|+++|. .++||.+|.. ...|..
T Consensus 66 ~sp~~~---~las~s~D~~v~iw~~~~~~~------~~~~~~~~~~~~~h~~~V~~v~~sp~-g~~las~s~D~~v~iwd 135 (330)
T 2hes_X 66 WRPHTS---LLAAGSFDSTVSIWAKEESAD------RTFEMDLLAIIEGHENEVKGVAWSND-GYYLATCSRDKSVWIWE 135 (330)
T ss_dssp ECTTSS---EEEEEETTSCEEEEEC-------------CCCEEEEEEC----CEEEEEECTT-SCEEEEEETTSCEEEEE
T ss_pred ECCCCC---EEEEEeCCCcEEEEEcccCcC------ccccceeEEEEcCCCCcEEEEEECCC-CCEEEEEeCCCEEEEEe
Confidence 377653 447777999999998743110 0001111100 112345889999996 4788888764 456666
Q ss_pred ecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 446 FTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 446 i~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
+...|. .... +..-..-...|..+.|-|..+ .||... ...|||||+..
T Consensus 136 ~~~~~~-~~~~--~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~iW~~~~ 184 (330)
T 2hes_X 136 TDESGE-EYEC--ISVLQEHSQDVKHVIWHPSEA-LLASSSYDDTVRIWKDYD 184 (330)
T ss_dssp CCTTCC-CCEE--EEEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEEEET
T ss_pred ccCCCC-CeEE--EEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCC
Confidence 654443 1111 111111257899999999865 454444 56899999753
No 58
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=93.88 E-value=0.58 Score=44.51 Aligned_cols=121 Identities=17% Similarity=0.211 Sum_probs=62.4
Q ss_pred eeccCcccccceEEEEeecCCeEEEeehhh--hccccc----ccccccccccccccccceeEEEeeecCCCcceeeeecc
Q psy11311 365 CILSSPQSKRQHLVAVSHEKGKITLLQLSG--LLKQID----SSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGL 438 (499)
Q Consensus 365 c~L~sp~g~rq~LvAVshEk~KVtllqls~--LLkqad----ss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Gl 438 (499)
|+--||.|+ ++|+. -.+.|.|.++.. ++.... ..++...+...+...-...|.+++|+|.. ++||.++.
T Consensus 69 ~v~fspdg~---~la~g-~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg-~~l~s~~~ 143 (393)
T 1erj_A 69 CVKFSNDGE---YLATG-CNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDG-KFLATGAE 143 (393)
T ss_dssp EEEECTTSS---EEEEE-CBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTS-SEEEEEET
T ss_pred EEEECCCCC---EEEEE-cCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCC-CEEEEEcC
Confidence 333477764 44774 467888887742 211100 00011111111111223348899999954 67777665
Q ss_pred c-eeEEEEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecCceEEeecCC
Q psy11311 439 K-ECIVFSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLRP 497 (499)
Q Consensus 439 k-eC~Vlti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~ 497 (499)
. ...|.-+.. |+ +...+.- -...|..+.|-|..+..+.-.....|+|||+..
T Consensus 144 d~~i~iwd~~~-~~-----~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~ 196 (393)
T 1erj_A 144 DRLIRIWDIEN-RK-----IVMILQG-HEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRT 196 (393)
T ss_dssp TSCEEEEETTT-TE-----EEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CCeEEEEECCC-Cc-----EEEEEcc-CCCCEEEEEEcCCCCEEEEecCCCcEEEEECCC
Confidence 4 334444432 33 2222221 256799999999876433333456899999864
No 59
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=93.88 E-value=0.36 Score=46.51 Aligned_cols=110 Identities=15% Similarity=0.117 Sum_probs=66.7
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecC
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTS 448 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~ 448 (499)
+|.. ..|||+..+.|.|.|.++..- .+..+.++ ..-.-.|.+|+|+|.+.++|+.+|... .|...+-
T Consensus 128 ~P~~--~~~lasGs~dg~i~lWd~~~~--------~~~~~~~~--~gH~~~V~~l~f~p~~~~~l~s~s~D~-~v~iwd~ 194 (435)
T 4e54_B 128 HPTH--PSTVAVGSKGGDIMLWNFGIK--------DKPTFIKG--IGAGGSITGLKFNPLNTNQFYASSMEG-TTRLQDF 194 (435)
T ss_dssp CSSC--TTCEEEEETTSCEEEECSSCC--------SCCEEECC--CSSSCCCCEEEECSSCTTEEEEECSSS-CEEEEET
T ss_pred eCCC--CCEEEEEeCCCEEEEEECCCC--------CceeEEEc--cCCCCCEEEEEEeCCCCCEEEEEeCCC-EEEEeec
Confidence 6633 447799889999999987421 11111111 112235889999999999999888753 3333333
Q ss_pred CCCcccceeeeccccC-CCceeEeeEEecCCCceEEEee-cCceEEeecC
Q psy11311 449 GMSQATDSITINPHCE-TSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLR 496 (499)
Q Consensus 449 ~G~~v~d~l~i~l~l~-~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs 496 (499)
++. .+..-.... ...++..+.|-|..+ .|+..+ ...|+|||+.
T Consensus 195 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~dg~i~~wd~~ 239 (435)
T 4e54_B 195 KGN----ILRVFASSDTINIWFCSLDVSASSR-MVVTGDNVGNVILLNMD 239 (435)
T ss_dssp TSC----EEEEEECCSSCSCCCCCEEEETTTT-EEEEECSSSBEEEEESS
T ss_pred cCC----ceeEEeccCCCCccEEEEEECCCCC-EEEEEeCCCcEeeeccC
Confidence 333 122222222 256778889998866 455444 4579999985
No 60
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=93.79 E-value=0.61 Score=44.55 Aligned_cols=107 Identities=13% Similarity=0.186 Sum_probs=69.3
Q ss_pred CcccccceEEEEee--cCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEe
Q psy11311 369 SPQSKRQHLVAVSH--EKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSF 446 (499)
Q Consensus 369 sp~g~rq~LvAVsh--Ek~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti 446 (499)
+|.+. .++|+.. ..+.|-|.++..- +.+........|.+++++|....+++..|+.+..|...
T Consensus 285 ~p~~~--~~la~~~gs~D~~I~iwd~~t~-------------~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iw 349 (420)
T 4gga_A 285 CPWQS--NVLATGGGTSDRHIRIWNVCSG-------------ACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIW 349 (420)
T ss_dssp CTTCT--TEEEEEECTTTCEEEEEETTTT-------------EEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEE
T ss_pred CCCcc--cEEEEEeecCCCEEEEEeCCcc-------------ccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEE
Confidence 55553 3446532 4578888887421 22233344567899999999988888889988777666
Q ss_pred cC-CCCcccceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 447 TS-GMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 447 ~~-~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
+- .|+ ..-.+.- -...|..+.|-|..+ .||-.. ...|||||+..
T Consensus 350 d~~~~~-----~v~~l~g-H~~~V~~l~~spdg~-~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 350 KYPTMA-----KVAELKG-HTSRVLSLTMSPDGA-TVASAAADETLRLWRCFE 395 (420)
T ss_dssp ETTTCC-----EEEEECC-CSSCEEEEEECTTSS-CEEEEETTTEEEEECCSC
T ss_pred ECCCCc-----EEEEEcC-CCCCEEEEEEcCCCC-EEEEEecCCeEEEEECCC
Confidence 54 344 2222221 146899999999866 454444 35799999864
No 61
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=93.74 E-value=0.43 Score=45.94 Aligned_cols=104 Identities=18% Similarity=0.302 Sum_probs=64.7
Q ss_pred eEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEecCCCCccc
Q psy11311 376 HLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSFTSGMSQAT 454 (499)
Q Consensus 376 ~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti~~~G~~v~ 454 (499)
.+||+....|.|.|.++.. + . +..+. .-.-.|.+|+++|.++.+||.+|.. ...|+-+..... .
T Consensus 222 ~~l~~g~~dg~i~~wd~~~--------~-~--~~~~~--~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~-~- 286 (435)
T 4e54_B 222 RMVVTGDNVGNVILLNMDG--------K-E--LWNLR--MHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRG-K- 286 (435)
T ss_dssp TEEEEECSSSBEEEEESSS--------C-B--CCCSB--CCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCS-S-
T ss_pred CEEEEEeCCCcEeeeccCc--------c-e--eEEEe--cccceEEeeeecCCCceEEEEecCcceeeEEecccccc-c-
Confidence 3557778899999998742 1 1 11111 1234689999999998888888764 455665554222 1
Q ss_pred ceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 455 DSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 455 d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
..+.....-...|..+.|-|..+ .|+... ...|+|||+..
T Consensus 287 --~~~~~~~~h~~~v~~~~~spdg~-~l~s~~~D~~i~iwd~~~ 327 (435)
T 4e54_B 287 --ASFLYSLPHRHPVNAACFSPDGA-RLLTTDQKSEIRVYSASQ 327 (435)
T ss_dssp --SCCSBCCBCSSCEEECCBCTTSS-EEEEEESSSCEEEEESSS
T ss_pred --ceEEEeeeccccccceeECCCCC-eeEEEcCCCEEEEEECCC
Confidence 11111111256788999999766 455444 45799999864
No 62
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=93.69 E-value=0.71 Score=40.51 Aligned_cols=103 Identities=13% Similarity=0.129 Sum_probs=64.6
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecC
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTS 448 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~ 448 (499)
+|.|+ | ++..+.|.|.|+++..-- . +..+. .-.-.|.+|+++|.+ .|+++| .+..|..++-
T Consensus 193 ~~~~~---~-~~~~~dg~i~i~d~~~~~-------~---~~~~~--~~~~~i~~~~~~~~~--~l~~~~-~dg~v~iwd~ 253 (313)
T 3odt_A 193 VDDGH---F-ISCSNDGLIKLVDMHTGD-------V---LRTYE--GHESFVYCIKLLPNG--DIVSCG-EDRTVRIWSK 253 (313)
T ss_dssp EETTE---E-EEEETTSEEEEEETTTCC-------E---EEEEE--CCSSCEEEEEECTTS--CEEEEE-TTSEEEEECT
T ss_pred cCCCe---E-EEccCCCeEEEEECCchh-------h---hhhhh--cCCceEEEEEEecCC--CEEEEe-cCCEEEEEEC
Confidence 55553 6 566799999999985310 0 01111 123468899999977 455554 4555555553
Q ss_pred -CCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecCceEEeecCC
Q psy11311 449 -GMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLRP 497 (499)
Q Consensus 449 -~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~ 497 (499)
.|+ ....+. . ....|..+.|.|..+ .++......|+|||+..
T Consensus 254 ~~~~-~~~~~~----~-~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 254 ENGS-LKQVIT----L-PAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp TTCC-EEEEEE----C-SSSCEEEEEECTTSC-EEEEETTSCEEEEESCG
T ss_pred CCCc-eeEEEe----c-cCceEEEEEEccCCC-EEEEeCCCcEEEEeCCC
Confidence 344 322222 2 245799999999987 56666677899999875
No 63
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=93.54 E-value=0.82 Score=40.95 Aligned_cols=110 Identities=10% Similarity=0.060 Sum_probs=62.6
Q ss_pred EEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEecCCCCcccc
Q psy11311 377 LVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSFTSGMSQATD 455 (499)
Q Consensus 377 LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti~~~G~~v~d 455 (499)
+++.+...+.|.+.++...-+.....+ -+++.....+-.|.+|+++|.. |++++.. ...|+.+...+. .
T Consensus 114 ~l~s~~~d~~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~-~-- 183 (342)
T 1yfq_A 114 KLIAASWDGLIEVIDPRNYGDGVIAVK----NLNSNNTKVKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCED-D-- 183 (342)
T ss_dssp EEEEEETTSEEEEECHHHHTTBCEEEE----ESCSSSSSSCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTT-C--
T ss_pred EEEEEcCCCeEEEEccccccccccccc----CCeeeEEeeCCceEEEEecCCc---EEEEeCCCeEEEEECCcccc-c--
Confidence 446667999999999875322110000 1122222356788999998755 5555444 455555544233 1
Q ss_pred eeeeccccCCCceeEeeEEec-CCCceEEEeec-CceEEeecCCC
Q psy11311 456 SITINPHCETSNYIIKALWIP-GRQSTLAIVTA-LNIKIYQLRPE 498 (499)
Q Consensus 456 ~l~i~l~l~~~~fIik~~Wip-gsq~~LAVvT~-~fVKIYDLs~d 498 (499)
............|..+.|-| ..+ .|++.+. ..|+|||+...
T Consensus 184 -~~~~~~~~~~~~i~~i~~~~~~~~-~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 184 -NGTIEESGLKYQIRDVALLPKEQE-GYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp -CCEEEECSCSSCEEEEEECSGGGC-EEEEEETTSEEEEEECCTT
T ss_pred -cceeeecCCCCceeEEEECCCCCC-EEEEEecCCcEEEEEEcCC
Confidence 11111112356789999999 654 4555554 58999998653
No 64
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=93.54 E-value=0.44 Score=42.94 Aligned_cols=114 Identities=11% Similarity=0.035 Sum_probs=66.8
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecC
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTS 448 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~ 448 (499)
+|.|+ .|++.....++|.++++... ++ ++++...+.+..+..|+++|.. ++|+|....+-.|..++.
T Consensus 184 spdg~--~l~v~~~~~~~v~v~d~~~~---------~~-~~~~~~~~~~~~~~~~~~spdg-~~l~v~~~~~~~i~~~d~ 250 (331)
T 3u4y_A 184 TPDGN--FAFVANLIGNSIGILETQNP---------EN-ITLLNAVGTNNLPGTIVVSRDG-STVYVLTESTVDVFNFNQ 250 (331)
T ss_dssp CTTSS--EEEEEETTTTEEEEEECSST---------TS-CEEEEEEECSSCCCCEEECTTS-SEEEEECSSEEEEEEEET
T ss_pred CCCCC--EEEEEeCCCCeEEEEECCCC---------cc-cceeeeccCCCCCceEEECCCC-CEEEEEEcCCCEEEEEEC
Confidence 77664 35444445789999997421 00 1123333344556788999865 677777766666777776
Q ss_pred C-CCcc--cceeeeccccCC--CceeEeeEEecCCCceEEEeec--CceEEeecCC
Q psy11311 449 G-MSQA--TDSITINPHCET--SNYIIKALWIPGRQSTLAIVTA--LNIKIYQLRP 497 (499)
Q Consensus 449 ~-G~~v--~d~l~i~l~l~~--~~fIik~~Wipgsq~~LAVvT~--~fVKIYDLs~ 497 (499)
. |+ + ...+.-++.+.. ......+.|-|..+ +|+++.. ..|+|||++.
T Consensus 251 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 251 LSGT-LSFVKSFGHGLLIDPRPLFGANQMALNKTET-KLFISANISRELKVFTISG 304 (331)
T ss_dssp TTTE-EEEEEEEECCCCCCCGGGTTCCCEEECTTSS-EEEEEETTTTEEEEEETTS
T ss_pred CCCc-eeeecccccccccCCCCcccccceEECCCCC-EEEEecCCCCcEEEEEecC
Confidence 4 55 5 222222222221 11124568888866 5666654 3699999975
No 65
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=93.52 E-value=0.63 Score=42.61 Aligned_cols=115 Identities=9% Similarity=0.085 Sum_probs=66.1
Q ss_pred cCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc--eeEEEE
Q psy11311 368 SSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK--ECIVFS 445 (499)
Q Consensus 368 ~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk--eC~Vlt 445 (499)
.+|.|+ |++.....++|.++++.. + .+++...-........+.+|+++|.. ++|+|++.. ...|+.
T Consensus 148 ~spdg~---l~v~~~~~~~v~~~~~~~-----~---g~~~~~~~~~~~~g~~p~~~~~spdg-~~l~v~~~~~~~v~v~~ 215 (347)
T 3hfq_A 148 LTPDNR---LAVIDLGSDKVYVYNVSD-----A---GQLSEQSVLTMEAGFGPRHLVFSPDG-QYAFLAGELSSQIASLK 215 (347)
T ss_dssp ECTTSC---EEEEETTTTEEEEEEECT-----T---SCEEEEEEEECCTTCCEEEEEECTTS-SEEEEEETTTTEEEEEE
T ss_pred ECCCCc---EEEEeCCCCEEEEEEECC-----C---CcEEEeeeEEcCCCCCCceEEECCCC-CEEEEEeCCCCEEEEEE
Confidence 378776 656655678899999851 0 11111110111222345679999965 678887655 445666
Q ss_pred ecC-CCCcccceeeeccccC---CCceeEeeEEecCCCceEEEee--cCceEEeecC
Q psy11311 446 FTS-GMSQATDSITINPHCE---TSNYIIKALWIPGRQSTLAIVT--ALNIKIYQLR 496 (499)
Q Consensus 446 i~~-~G~~v~d~l~i~l~l~---~~~fIik~~Wipgsq~~LAVvT--~~fVKIYDLs 496 (499)
++. .|+ +.....+...-. ....+..+.|=|..+ .|+|+. +..|+|||+.
T Consensus 216 ~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~i~~spdG~-~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 216 YDTQTGA-FTQLGIVKTIPADYTAHNGAAAIRLSHDGH-FLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp EETTTTE-EEEEEEEESSCTTCCSCCEEEEEEECTTSC-EEEEEEETTTEEEEEEEC
T ss_pred ecCCCCc-eEEeeeeeecCCCCCCCCcceeEEECCCCC-EEEEEeCCCCEEEEEEEC
Confidence 665 355 322222221111 126788899999865 455544 4779999986
No 66
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=93.46 E-value=1 Score=42.99 Aligned_cols=109 Identities=17% Similarity=0.286 Sum_probs=66.4
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecC
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTS 448 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~ 448 (499)
+|.+ .+++|...+.|.|.|.++..- +...+++ .-.-.|.+|+|+|..+.|||.++. |..|...+-
T Consensus 223 ~p~~--~~~l~sg~~dg~v~~wd~~~~-------~~~~~~~-----~h~~~v~~v~fsp~g~~~lasgs~-D~~i~vwd~ 287 (344)
T 4gqb_B 223 HPQQ--SEVFVFGDENGTVSLVDTKST-------SCVLSSA-----VHSQCVTGLVFSPHSVPFLASLSE-DCSLAVLDS 287 (344)
T ss_dssp CSSC--TTEEEEEETTSEEEEEESCC---------CCEEEE-----CCSSCEEEEEECSSSSCCEEEEET-TSCEEEECT
T ss_pred cCCC--CcceEEeccCCcEEEEECCCC-------cEEEEEc-----CCCCCEEEEEEccCCCeEEEEEeC-CCeEEEEEC
Confidence 5544 456677778899999987421 0001111 112358899999988888887775 344444443
Q ss_pred CCCcccceeeeccccCCCceeEeeEEecCCCceEEEe-ecCceEEeecCCC
Q psy11311 449 GMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIV-TALNIKIYQLRPE 498 (499)
Q Consensus 449 ~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVv-T~~fVKIYDLs~d 498 (499)
+.. ++ +.+. .-...|..+.|=|..+..||-. -...|++|++..+
T Consensus 288 ~~~----~~-~~~~-~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 288 SLS----EL-FRSQ-AHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp TCC----EE-EEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred CCC----cE-EEEc-CCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 322 12 2221 1257899999998766545433 3578999999764
No 67
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=93.42 E-value=1.1 Score=41.73 Aligned_cols=111 Identities=18% Similarity=0.215 Sum_probs=67.1
Q ss_pred cCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEe
Q psy11311 368 SSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSF 446 (499)
Q Consensus 368 ~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti 446 (499)
-||.|+ .| |.+...+.|.|.++..- + . ..+..+. .-.-.|.+|+++|. .++||.+|.. ...|..+
T Consensus 69 ~sp~g~--~l-~s~s~D~~v~iw~~~~~----~-~---~~~~~~~--~h~~~v~~v~~sp~-~~~l~s~s~D~~v~iwd~ 134 (345)
T 3fm0_A 69 WSPCGN--YL-ASASFDATTCIWKKNQD----D-F---ECVTTLE--GHENEVKSVAWAPS-GNLLATCSRDKSVWVWEV 134 (345)
T ss_dssp ECTTSS--EE-EEEETTSCEEEEEECCC------E---EEEEEEC--CCSSCEEEEEECTT-SSEEEEEETTSCEEEEEE
T ss_pred ECCCCC--EE-EEEECCCcEEEEEccCC----C-e---EEEEEcc--CCCCCceEEEEeCC-CCEEEEEECCCeEEEEEC
Confidence 367653 34 77778899999876321 0 0 0011111 12346899999995 4788888765 5666766
Q ss_pred cCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 447 TSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 447 ~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
..... . ..+..-......|..+.|-|..+ .||... ...|+|||+..
T Consensus 135 ~~~~~-~---~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~i~~w~~~~ 181 (345)
T 3fm0_A 135 DEEDE-Y---ECVSVLNSHTQDVKHVVWHPSQE-LLASASYDDTVKLYREEE 181 (345)
T ss_dssp CTTSC-E---EEEEEECCCCSCEEEEEECSSSS-CEEEEETTSCEEEEEEET
T ss_pred CCCCC-e---EEEEEecCcCCCeEEEEECCCCC-EEEEEeCCCcEEEEEecC
Confidence 65433 1 11111112256799999999866 455554 56899999754
No 68
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=93.32 E-value=0.92 Score=39.79 Aligned_cols=99 Identities=6% Similarity=0.017 Sum_probs=64.0
Q ss_pred EEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecCCCCcccce
Q psy11311 377 LVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTSGMSQATDS 456 (499)
Q Consensus 377 LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~~G~~v~d~ 456 (499)
+++++.+.+.|.+.+....+.. ++ .-.-.|.++.+.|.+.++|++++.. ..|...+ .+.
T Consensus 116 ~l~~~~~d~~i~~~d~~~~~~~---------~~-----~~~~~v~~~~~~~~~~~~l~~~~~d-~~i~i~d-~~~----- 174 (313)
T 3odt_A 116 VVISGSWDKTAKVWKEGSLVYN---------LQ-----AHNASVWDAKVVSFSENKFLTASAD-KTIKLWQ-NDK----- 174 (313)
T ss_dssp EEEEEETTSEEEEEETTEEEEE---------EE-----CCSSCEEEEEEEETTTTEEEEEETT-SCEEEEE-TTE-----
T ss_pred EEEEEeCCCCEEEEcCCcEEEe---------cc-----cCCCceeEEEEccCCCCEEEEEECC-CCEEEEe-cCc-----
Confidence 4477789999999983322211 11 1234688899999888888887764 3333344 222
Q ss_pred eeeccccCCCceeEeeEEecCCCceEEEeecCceEEeecCC
Q psy11311 457 ITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLRP 497 (499)
Q Consensus 457 l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~ 497 (499)
....+.......|..+.|.|..+ .++......|+|||+..
T Consensus 175 ~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~ 214 (313)
T 3odt_A 175 VIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHT 214 (313)
T ss_dssp EEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTT
T ss_pred eEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCc
Confidence 33333333477899999999977 44444456899999864
No 69
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=93.29 E-value=0.73 Score=47.15 Aligned_cols=105 Identities=10% Similarity=0.106 Sum_probs=66.7
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecC
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTS 448 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~ 448 (499)
||.|+ ++|++...|.|.|.++..-- .+..+. .-+-.|..++++|. .++||++|- +..|...+-
T Consensus 22 sp~~~---~la~~~~~g~v~iwd~~~~~----------~~~~~~--~~~~~v~~~~~s~~-~~~l~~~~~-dg~i~vw~~ 84 (814)
T 3mkq_A 22 HPTEP---WVLTTLYSGRVEIWNYETQV----------EVRSIQ--VTETPVRAGKFIAR-KNWIIVGSD-DFRIRVFNY 84 (814)
T ss_dssp CSSSS---EEEEEETTSEEEEEETTTTE----------EEEEEE--CCSSCEEEEEEEGG-GTEEEEEET-TSEEEEEET
T ss_pred CCCCC---EEEEEeCCCEEEEEECCCCc----------eEEEEe--cCCCcEEEEEEeCC-CCEEEEEeC-CCeEEEEEC
Confidence 77553 45888899999999975411 111121 22345889999995 477887776 444444442
Q ss_pred -CCCcccceeeeccccCCCceeEeeEEecCCCceEEEeec-CceEEeecCC
Q psy11311 449 -GMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTA-LNIKIYQLRP 497 (499)
Q Consensus 449 -~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~-~fVKIYDLs~ 497 (499)
.|+ ..-. +.. ....|..+.|-|..+ .|++.+. ..|+|||+..
T Consensus 85 ~~~~-~~~~----~~~-~~~~v~~~~~s~~~~-~l~~~~~dg~i~vw~~~~ 128 (814)
T 3mkq_A 85 NTGE-KVVD----FEA-HPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWEN 128 (814)
T ss_dssp TTCC-EEEE----EEC-CSSCEEEEEECSSSS-EEEEEETTSEEEEEEGGG
T ss_pred CCCc-EEEE----Eec-CCCCEEEEEEeCCCC-EEEEEcCCCEEEEEECCC
Confidence 344 2222 211 257899999999876 5666655 5899999864
No 70
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=93.20 E-value=0.64 Score=50.30 Aligned_cols=120 Identities=19% Similarity=0.240 Sum_probs=77.3
Q ss_pred ceeeeeeccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc
Q psy11311 360 RRTCMCILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK 439 (499)
Q Consensus 360 rR~amc~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk 439 (499)
.....+|--||.| +.| |++...|.|-|++...+|.+.+ .. .++. .-.|-+++|+|- .++||++|..
T Consensus 85 ~~~V~~vawSPdG--~~L-As~s~dg~V~iwd~~~~l~~l~-~~-----~~~~----~~sv~svafSPD-G~~LAsgs~D 150 (588)
T 2j04_A 85 VCYPRVCKPSPID--DWM-AVLSNNGNVSVFKDNKMLTNLD-SK-----GNLS----SRTYHCFEWNPI-ESSIVVGNED 150 (588)
T ss_dssp SCCEEEEEECSSS--SCE-EEEETTSCEEEEETTEEEEECC-CS-----SCST----TTCEEEEEECSS-SSCEEEEETT
T ss_pred CCcEEEEEECCCC--CEE-EEEeCCCcEEEEeCCceeeecc-CC-----Cccc----cccEEEEEEcCC-CCEEEEEcCC
Confidence 3455667678866 335 8888999999999877666532 11 0011 124679999995 5899999975
Q ss_pred -eeEEEEecCCCCcccce-----eeeccccC-CCceeEeeEEecCCCceEEEeecCceEEeecCC
Q psy11311 440 -ECIVFSFTSGMSQATDS-----ITINPHCE-TSNYIIKALWIPGRQSTLAIVTALNIKIYQLRP 497 (499)
Q Consensus 440 -eC~Vlti~~~G~~v~d~-----l~i~l~l~-~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~ 497 (499)
..+|..+.. |. +.+. -.+..... -..-|..+.|-|+. .++..-...||+||+..
T Consensus 151 GtVkIWd~~~-~~-l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~ 211 (588)
T 2j04_A 151 GELQFFSIRK-NS-ENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSA 211 (588)
T ss_dssp SEEEEEECCC-CT-TTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCS
T ss_pred CEEEEEECCC-Cc-cccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCC
Confidence 555666654 33 2111 11111111 13689999999996 55666677899999864
No 71
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=93.16 E-value=0.48 Score=42.33 Aligned_cols=75 Identities=9% Similarity=0.168 Sum_probs=52.5
Q ss_pred ceeEEEeeecCCC--cceeeeeccc-eeEEEEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEE
Q psy11311 417 PITILSVEANPCN--EELLAVCGLK-ECIVFSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKI 492 (499)
Q Consensus 417 pF~Vlsl~~NP~n--e~~LAV~Glk-eC~Vlti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKI 492 (499)
.-.|..|+++|.. .++||+++.. ...|+.+...|. .+...+.- ....|..+.|-|..+ .|+..+ ...|+|
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~----~~~~~~~~-h~~~v~~~~~~~~~~-~l~s~~~dg~v~i 112 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ----TIPKAQQM-HTGPVLDVCWSDDGS-KVFTASCDKTAKM 112 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC----EEEEEEEE-CSSCEEEEEECTTSS-EEEEEETTSEEEE
T ss_pred CCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc----eeEEEecc-ccCCEEEEEECcCCC-EEEEEcCCCcEEE
Confidence 3468999999986 6788888875 567777776565 12112211 367799999999766 555555 557999
Q ss_pred eecCC
Q psy11311 493 YQLRP 497 (499)
Q Consensus 493 YDLs~ 497 (499)
||+..
T Consensus 113 wd~~~ 117 (368)
T 3mmy_A 113 WDLSS 117 (368)
T ss_dssp EETTT
T ss_pred EEcCC
Confidence 99875
No 72
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=93.14 E-value=1.8 Score=39.46 Aligned_cols=113 Identities=12% Similarity=0.141 Sum_probs=66.7
Q ss_pred EEEEeecCCeEEEeehhhhcccccccc-cccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEecCCCCccc
Q psy11311 377 LVAVSHEKGKITLLQLSGLLKQIDSSK-RKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSFTSGMSQAT 454 (499)
Q Consensus 377 LvAVshEk~KVtllqls~LLkqadss~-~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti~~~G~~v~ 454 (499)
++|++...|.|.|.++..--....... .-..+.......-.-.|.+|+++|.+.++||.+|.. ..+|..+.. |+ ..
T Consensus 58 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~-~~ 135 (408)
T 4a11_B 58 YMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNT-LQ-TA 135 (408)
T ss_dssp EEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTT-TE-EE
T ss_pred EEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCC-Cc-cc
Confidence 457778999999999864322111100 000001111123566899999999888888888765 345554443 33 22
Q ss_pred ceeeeccccCCCceeEeeEEecCCCc--eEEEee-cCceEEeecCC
Q psy11311 455 DSITINPHCETSNYIIKALWIPGRQS--TLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 455 d~l~i~l~l~~~~fIik~~Wipgsq~--~LAVvT-~~fVKIYDLs~ 497 (499)
..+ . ....+..+.|.|.+.. .|++.+ +..|+|||+..
T Consensus 136 ~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 175 (408)
T 4a11_B 136 DVF----N--FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS 175 (408)
T ss_dssp EEE----E--CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred eec----c--CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence 222 2 2456778889987543 455444 45899999864
No 73
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=93.11 E-value=0.87 Score=42.91 Aligned_cols=116 Identities=12% Similarity=0.222 Sum_probs=69.1
Q ss_pred eeccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEE
Q psy11311 365 CILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIV 443 (499)
Q Consensus 365 c~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~V 443 (499)
|+--+|.| +.| |.+.+.+.|-|.++..-- ...+++ .. .-.|.+++++|.. .+||..|.. .+.|
T Consensus 69 ~~~~s~d~--~~l-~s~s~Dg~v~vWd~~~~~-------~~~~~~-~~----~~~v~~~~~sp~g-~~lasg~~d~~i~v 132 (354)
T 2pbi_B 69 CMDWCKDK--RRI-VSSSQDGKVIVWDSFTTN-------KEHAVT-MP----CTWVMACAYAPSG-CAIACGGLDNKCSV 132 (354)
T ss_dssp EEEECTTS--SEE-EEEETTSEEEEEETTTCC-------EEEEEE-CS----SSCCCEEEECTTS-SEEEEESTTSEEEE
T ss_pred EEEECCCC--CEE-EEEeCCCeEEEEECCCCC-------cceEEe-cC----CCCEEEEEECCCC-CEEEEeeCCCCEEE
Confidence 33336766 345 666799999999864211 111111 11 1247889999965 778888776 6777
Q ss_pred EEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecCceEEeecCC
Q psy11311 444 FSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLRP 497 (499)
Q Consensus 444 lti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~ 497 (499)
+.+......-.-.....+.. -..+|..+.|-|..+..+.......|+|||+..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~ 185 (354)
T 2pbi_B 133 YPLTFDKNENMAAKKKSVAM-HTNYLSACSFTNSDMQILTASGDGTCALWDVES 185 (354)
T ss_dssp EECCCCTTCCSGGGCEEEEE-CSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred EEEeccccccccccceeeec-cCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Confidence 77765322000001111111 267899999999876444444456899999864
No 74
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=93.09 E-value=0.9 Score=43.00 Aligned_cols=117 Identities=12% Similarity=0.143 Sum_probs=68.8
Q ss_pred eeccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEE
Q psy11311 365 CILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIV 443 (499)
Q Consensus 365 c~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~V 443 (499)
+|..+|.+. ..| +.+...+.|-|.++..- ....++..-....-.-.|.++.+||.+.++||.+|.. ...|
T Consensus 162 ~~~~~~~~~-~~l-~s~s~D~~i~~wd~~~~-------~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~ 232 (380)
T 3iz6_a 162 SCQYVPDQE-TRL-ITGSGDQTCVLWDVTTG-------QRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRL 232 (380)
T ss_dssp CCBCCSSSS-SCE-EEECTTSCEEEECTTTC-------CEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEE
T ss_pred EEEEecCCC-CEE-EEECCCCcEEEEEcCCC-------cEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEE
Confidence 444455443 346 55458889999988531 0001111111122345799999999998888887765 3445
Q ss_pred EEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEe-ecCceEEeecCC
Q psy11311 444 FSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIV-TALNIKIYQLRP 497 (499)
Q Consensus 444 lti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVv-T~~fVKIYDLs~ 497 (499)
.-+...+. ....+ . .-...|..+.|-|..+. |+.. ....|||||+..
T Consensus 233 wd~~~~~~-~~~~~----~-~h~~~v~~v~~~p~~~~-l~s~s~D~~i~lwd~~~ 280 (380)
T 3iz6_a 233 WDLRITSR-AVRTY----H-GHEGDINSVKFFPDGQR-FGTGSDDGTCRLFDMRT 280 (380)
T ss_dssp EETTTTCC-CCEEE----C-CCSSCCCEEEECTTSSE-EEEECSSSCEEEEETTT
T ss_pred EECCCCCc-ceEEE----C-CcCCCeEEEEEecCCCe-EEEEcCCCeEEEEECCC
Confidence 55544344 21111 1 12467899999998763 4433 346899999864
No 75
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=93.04 E-value=1.1 Score=42.25 Aligned_cols=105 Identities=8% Similarity=0.001 Sum_probs=63.8
Q ss_pred eEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccce-eEEEEecCCCCccc
Q psy11311 376 HLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKE-CIVFSFTSGMSQAT 454 (499)
Q Consensus 376 ~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glke-C~Vlti~~~G~~v~ 454 (499)
.++|++...+.|.|.++...- .+..+....-.-.|.+|+++|. .++||+++... ..|+-+.. |+
T Consensus 183 ~~l~~~~~d~~i~iwd~~~~~----------~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~dg~i~iwd~~~-~~--- 247 (437)
T 3gre_A 183 SLLVALTNLSRVIIFDIRTLE----------RLQIIENSPRHGAVSSICIDEE-CCVLILGTTRGIIDIWDIRF-NV--- 247 (437)
T ss_dssp EEEEEEETTSEEEEEETTTCC----------EEEEEECCGGGCCEEEEEECTT-SCEEEEEETTSCEEEEETTT-TE---
T ss_pred CEEEEEeCCCeEEEEeCCCCe----------eeEEEccCCCCCceEEEEECCC-CCEEEEEcCCCeEEEEEcCC-cc---
Confidence 344777899999999985411 0112221112347889999997 47777777653 55555554 44
Q ss_pred ceeeeccccCCCceeEeeEEecC--CCc-eEEEeec-CceEEeecCC
Q psy11311 455 DSITINPHCETSNYIIKALWIPG--RQS-TLAIVTA-LNIKIYQLRP 497 (499)
Q Consensus 455 d~l~i~l~l~~~~fIik~~Wipg--sq~-~LAVvT~-~fVKIYDLs~ 497 (499)
..-.+.+....-|..+.|-|. ... .|+..+. ..|+|||+..
T Consensus 248 --~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 292 (437)
T 3gre_A 248 --LIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVK 292 (437)
T ss_dssp --EEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTT
T ss_pred --EEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCC
Confidence 222333344557899999875 223 4554444 3599999964
No 76
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=93.03 E-value=2.3 Score=38.19 Aligned_cols=111 Identities=14% Similarity=0.149 Sum_probs=64.2
Q ss_pred eeccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEE
Q psy11311 365 CILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIV 443 (499)
Q Consensus 365 c~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~V 443 (499)
|+--+|.| + ++|.....+.|.|.++..-- . +..+.. -.-.|.+++++|.. ++|++++.. ...|
T Consensus 112 ~~~~~~~~--~-~l~s~~~d~~i~iwd~~~~~-------~---~~~~~~--~~~~v~~~~~~~~~-~~l~~~~~d~~i~~ 175 (312)
T 4ery_A 112 CCNFNPQS--N-LIVSGSFDESVRIWDVKTGK-------C---LKTLPA--HSDPVSAVHFNRDG-SLIVSSSYDGLCRI 175 (312)
T ss_dssp EEEECSSS--S-EEEEEETTSCEEEEETTTCC-------E---EEEECC--CSSCEEEEEECTTS-SEEEEEETTSCEEE
T ss_pred EEEEcCCC--C-EEEEEeCCCcEEEEECCCCE-------E---EEEecC--CCCcEEEEEEcCCC-CEEEEEeCCCcEEE
Confidence 33346654 3 44766799999999985310 0 111111 12358889999854 677776654 3444
Q ss_pred EEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecCceEEeecCC
Q psy11311 444 FSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLRP 497 (499)
Q Consensus 444 lti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~ 497 (499)
+-+.. |+ ..-.+....+.-|..+.|-|..+..++-.....|+|||+..
T Consensus 176 wd~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 223 (312)
T 4ery_A 176 WDTAS-GQ-----CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK 223 (312)
T ss_dssp EETTT-CC-----EEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTT
T ss_pred EECCC-Cc-----eeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 44433 33 11122222355677889999877433334466899999864
No 77
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=93.00 E-value=1.9 Score=39.87 Aligned_cols=99 Identities=14% Similarity=0.183 Sum_probs=62.7
Q ss_pred EEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEecCCCCcccc
Q psy11311 377 LVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSFTSGMSQATD 455 (499)
Q Consensus 377 LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti~~~G~~v~d 455 (499)
++|.....+.|.|.+...- ...+++ .-.-.|.+|+++|.. ++||.+|.. ...|.-+...+. ...
T Consensus 186 ~l~s~~~d~~i~iwd~~~~--------~~~~~~-----~h~~~v~~~~~s~~g-~~l~sgs~dg~v~iwd~~~~~~-~~~ 250 (343)
T 2xzm_R 186 YFASVGWDGRLKVWNTNFQ--------IRYTFK-----AHESNVNHLSISPNG-KYIATGGKDKKLLIWDILNLTY-PQR 250 (343)
T ss_dssp EEEEEETTSEEEEEETTTE--------EEEEEE-----CCSSCEEEEEECTTS-SEEEEEETTCEEEEEESSCCSS-CSE
T ss_pred EEEEEcCCCEEEEEcCCCc--------eeEEEc-----CccccceEEEECCCC-CEEEEEcCCCeEEEEECCCCcc-cce
Confidence 4466679999999984211 011111 123468899999954 677777654 344444433333 111
Q ss_pred eeeeccccCCCceeEeeEEecCCCceEEEeecCceEEeecCC
Q psy11311 456 SITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLRP 497 (499)
Q Consensus 456 ~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~ 497 (499)
. +..+..|..+.|-|..+ .||+.+...|+|||+..
T Consensus 251 ~------~~~~~~v~~v~~sp~~~-~la~~~d~~v~iw~~~~ 285 (343)
T 2xzm_R 251 E------FDAGSTINQIAFNPKLQ-WVAVGTDQGVKIFNLMT 285 (343)
T ss_dssp E------EECSSCEEEEEECSSSC-EEEEEESSCEEEEESSS
T ss_pred e------ecCCCcEEEEEECCCCC-EEEEECCCCEEEEEeCC
Confidence 1 11245699999999865 68888899999999864
No 78
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=92.96 E-value=0.88 Score=42.39 Aligned_cols=109 Identities=16% Similarity=0.273 Sum_probs=64.8
Q ss_pred eccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEE
Q psy11311 366 ILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVF 444 (499)
Q Consensus 366 ~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vl 444 (499)
+--+|.|+ ++|+....|.|.|.++..- + .+..+. .-...|.+|+++|.. ++||.++.. ...|.
T Consensus 170 ~~~spdg~---~lasg~~dg~i~iwd~~~~-------~---~~~~~~--~h~~~v~~l~~spd~-~~l~s~s~dg~i~iw 233 (321)
T 3ow8_A 170 IAYSPDGK---YLASGAIDGIINIFDIATG-------K---LLHTLE--GHAMPIRSLTFSPDS-QLLVTASDDGYIKIY 233 (321)
T ss_dssp EEECTTSS---EEEEEETTSCEEEEETTTT-------E---EEEEEC--CCSSCCCEEEECTTS-CEEEEECTTSCEEEE
T ss_pred EEECCCCC---EEEEEcCCCeEEEEECCCC-------c---EEEEEc--ccCCceeEEEEcCCC-CEEEEEcCCCeEEEE
Confidence 33477663 4578789999999998531 0 011111 123457789999954 677776654 24444
Q ss_pred EecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecCceEEeecCC
Q psy11311 445 SFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLRP 497 (499)
Q Consensus 445 ti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~ 497 (499)
.+.. ++ ... .+. .....|..+.|-|..+..+.-.....|+|||+..
T Consensus 234 d~~~-~~-~~~----~~~-~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~ 279 (321)
T 3ow8_A 234 DVQH-AN-LAG----TLS-GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 279 (321)
T ss_dssp ETTT-CC-EEE----EEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred ECCC-cc-eeE----EEc-CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC
Confidence 4433 33 211 111 1257899999999866433333456899999864
No 79
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=92.94 E-value=1.6 Score=40.52 Aligned_cols=110 Identities=18% Similarity=0.177 Sum_probs=65.6
Q ss_pred cCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEec
Q psy11311 368 SSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFT 447 (499)
Q Consensus 368 ~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~ 447 (499)
-+|.|+ ++|...+.++|.|.++...-.. +..+ ...-.|.+|+|+|.. .+||+..-....|+.+.
T Consensus 221 ~s~~g~---~l~sgs~dg~v~iwd~~~~~~~---------~~~~---~~~~~v~~v~~sp~~-~~la~~~d~~v~iw~~~ 284 (343)
T 2xzm_R 221 ISPNGK---YIATGGKDKKLLIWDILNLTYP---------QREF---DAGSTINQIAFNPKL-QWVAVGTDQGVKIFNLM 284 (343)
T ss_dssp ECTTSS---EEEEEETTCEEEEEESSCCSSC---------SEEE---ECSSCEEEEEECSSS-CEEEEEESSCEEEEESS
T ss_pred ECCCCC---EEEEEcCCCeEEEEECCCCccc---------ceee---cCCCcEEEEEECCCC-CEEEEECCCCEEEEEeC
Confidence 367653 4477779999999998322110 0111 123358999999975 67776655556666665
Q ss_pred CCCCcccceeeecccc--------CCCceeEeeEEecCCCceEEEe-ecCceEEeecC
Q psy11311 448 SGMSQATDSITINPHC--------ETSNYIIKALWIPGRQSTLAIV-TALNIKIYQLR 496 (499)
Q Consensus 448 ~~G~~v~d~l~i~l~l--------~~~~fIik~~Wipgsq~~LAVv-T~~fVKIYDLs 496 (499)
. ++ ......+.... .....|..+.|=|..+ .||.. ....|+|||+.
T Consensus 285 ~-~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~-~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 285 T-QS-KAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGK-KLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp S-CC-SCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSC-CEEEEETTSEEEEEEEE
T ss_pred C-CC-CCceEEeecCcchhhhhhcCCCCceEEEEECCCCC-eEEEecCCceEEEEEEE
Confidence 4 22 11111121110 1246789999999876 45554 46689999985
No 80
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=92.91 E-value=0.36 Score=45.70 Aligned_cols=113 Identities=11% Similarity=0.267 Sum_probs=70.5
Q ss_pred cCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEe
Q psy11311 368 SSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSF 446 (499)
Q Consensus 368 ~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti 446 (499)
-+|.| ..| |.+...++|-|.++..- ....+++.- .-.|.+++++|.. ++||.+|.. .+.|+.+
T Consensus 74 ~sp~~--~~l-~s~s~D~~v~iWd~~~~-------~~~~~~~~h-----~~~v~~~~~s~~g-~~las~~~d~~v~iw~~ 137 (380)
T 3iz6_a 74 WTPEK--NWI-VSASQDGRLIVWNALTS-------QKTHAIKLH-----CPWVMECAFAPNG-QSVACGGLDSACSIFNL 137 (380)
T ss_dssp ECTTS--SCE-EEEETTSEEEEEETTTT-------EEEEEEECC-----CTTCCCCEECTTS-SEEEECCSSSCCEEEEC
T ss_pred EcCCC--CEE-EEEeCCCeEEEEECCCC-------ccceEEecC-----CCCEEEEEECCCC-CEEEEeeCCCcEEEEEC
Confidence 36765 345 66678899999987431 111122111 1136788999965 788888876 6788887
Q ss_pred cCCCCcccceeeeccccC-CCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 447 TSGMSQATDSITINPHCE-TSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 447 ~~~G~~v~d~l~i~l~l~-~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
..... -.....+.-.+. -..+|..+.|.|.....|+... ...|+|||+..
T Consensus 138 ~~~~~-~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~ 189 (380)
T 3iz6_a 138 SSQAD-RDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTT 189 (380)
T ss_dssp CCCSS-CCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTT
T ss_pred CCCcc-ccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCC
Confidence 65332 222222222232 2578999999998776665544 45899999864
No 81
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=92.89 E-value=1.5 Score=40.74 Aligned_cols=106 Identities=11% Similarity=0.090 Sum_probs=66.7
Q ss_pred cCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEe
Q psy11311 368 SSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSF 446 (499)
Q Consensus 368 ~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti 446 (499)
.+|.|+ ++|++...|.|.|.++..- +....+ ..-.-.|.+|+++|.. ++||.++.. ...|+.+
T Consensus 105 ~~~~~~---~l~~~~~dg~i~iwd~~~~-------~~~~~~-----~~h~~~v~~~~~~~~~-~~l~s~s~d~~i~iwd~ 168 (420)
T 3vl1_A 105 AKLQMR---RFILGTTEGDIKVLDSNFN-------LQREID-----QAHVSEITKLKFFPSG-EALISSSQDMQLKIWSV 168 (420)
T ss_dssp ECSSSC---EEEEEETTSCEEEECTTSC-------EEEEET-----TSSSSCEEEEEECTTS-SEEEEEETTSEEEEEET
T ss_pred EecCCC---EEEEEECCCCEEEEeCCCc-------ceeeec-----ccccCccEEEEECCCC-CEEEEEeCCCeEEEEeC
Confidence 356553 3477778999999987421 101111 1334578999999964 678777764 4556655
Q ss_pred cCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeec-CceEEeecCC
Q psy11311 447 TSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTA-LNIKIYQLRP 497 (499)
Q Consensus 447 ~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~-~fVKIYDLs~ 497 (499)
.. |+ ..-.+ . .....|..+.|-|..+ .|+.... ..|+|||+..
T Consensus 169 ~~-~~-~~~~~----~-~h~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~ 212 (420)
T 3vl1_A 169 KD-GS-NPRTL----I-GHRATVTDIAIIDRGR-NVLSASLDGTIRLWECGT 212 (420)
T ss_dssp TT-CC-CCEEE----E-CCSSCEEEEEEETTTT-EEEEEETTSCEEEEETTT
T ss_pred CC-Cc-CceEE----c-CCCCcEEEEEEcCCCC-EEEEEcCCCcEEEeECCC
Confidence 54 44 22222 1 1357899999999865 4555544 5699999864
No 82
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=92.85 E-value=1.3 Score=39.78 Aligned_cols=108 Identities=9% Similarity=0.113 Sum_probs=68.0
Q ss_pred CcccccceEEEEeecCC---eEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeecc--ce-eE
Q psy11311 369 SPQSKRQHLVAVSHEKG---KITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGL--KE-CI 442 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~---KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Gl--ke-C~ 442 (499)
+|.| +.| +++.+++ .|.++++..-- .+ ...+.+...-.++++|.. ++|+|++. .. ..
T Consensus 92 s~dg--~~l-~~~~~~~~~~~i~v~d~~~~~--------~~-----~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~i~ 154 (331)
T 3u4y_A 92 TPDD--QFA-VTVTGLNHPFNMQSYSFLKNK--------FI-----STIPIPYDAVGIAISPNG-NGLILIDRSSANTVR 154 (331)
T ss_dssp CTTS--SEE-EECCCSSSSCEEEEEETTTTE--------EE-----EEEECCTTEEEEEECTTS-SCEEEEEETTTTEEE
T ss_pred CCCC--CEE-EEecCCCCcccEEEEECCCCC--------eE-----EEEECCCCccceEECCCC-CEEEEEecCCCceEE
Confidence 6655 345 5666664 89999884211 01 111122334689999976 45666655 34 78
Q ss_pred EEEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEee--cCceEEeecCC
Q psy11311 443 VFSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT--ALNIKIYQLRP 497 (499)
Q Consensus 443 Vlti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT--~~fVKIYDLs~ 497 (499)
++.++.+|. +.+.- .-.+..+.....+.|-|..+ .|+++. +..|.|||+..
T Consensus 155 ~~~~~~~g~-~~~~~--~~~~~~~~~~~~~~~spdg~-~l~v~~~~~~~v~v~d~~~ 207 (331)
T 3u4y_A 155 RFKIDADGV-LFDTG--QEFISGGTRPFNITFTPDGN-FAFVANLIGNSIGILETQN 207 (331)
T ss_dssp EEEECTTCC-EEEEE--EEEECSSSSEEEEEECTTSS-EEEEEETTTTEEEEEECSS
T ss_pred EEEECCCCc-EeecC--CccccCCCCccceEECCCCC-EEEEEeCCCCeEEEEECCC
Confidence 999998888 66543 11224466688899999865 455554 45699999864
No 83
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=92.80 E-value=1.2 Score=43.42 Aligned_cols=103 Identities=16% Similarity=0.204 Sum_probs=65.2
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecC
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTS 448 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~ 448 (499)
||.|+ +||...+.+.|.|.++..- . +..|. .-.-.|.+|+|+|.+ ++||.+|. |..|...+.
T Consensus 25 spdg~---~las~~~d~~v~iWd~~~~--------~---~~~l~--gh~~~V~~l~fspdg-~~las~~~-d~~i~vWd~ 86 (577)
T 2ymu_A 25 SPDGQ---TIASASDDKTVKLWNRNGQ--------L---LQTLT--GHSSSVWGVAFSPDG-QTIASASD-DKTVKLWNR 86 (577)
T ss_dssp CTTSS---CEEEEETTSEEEEECTTSC--------E---EEEEE--CCSSCEEEEEECTTS-SEEEEEET-TSCEEEEET
T ss_pred CCCCC---EEEEEeCCCEEEEEECCCC--------E---EEEEe--CCCCCEEEEEECCCC-CEEEEEeC-CCEEEEEEC
Confidence 78764 4588778889999985321 1 11121 123468899999954 78887774 555555556
Q ss_pred CCCcccceeeeccccCCCceeEeeEEecCCCceEEEe-ecCceEEeecC
Q psy11311 449 GMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIV-TALNIKIYQLR 496 (499)
Q Consensus 449 ~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVv-T~~fVKIYDLs 496 (499)
.|+ ..- .+.- ....|..+.|-|..+. |+.. ....+++||..
T Consensus 87 ~~~-~~~----~~~~-~~~~v~~~~~s~d~~~-l~~~~~d~~~~~~~~~ 128 (577)
T 2ymu_A 87 NGQ-LLQ----TLTG-HSSSVRGVAFSPDGQT-IASASDDKTVKLWNRN 128 (577)
T ss_dssp TSC-EEE----EECC-CSSCEEEEEECTTSSE-EEEEETTSCEEEEETT
T ss_pred CCC-EEE----EEEC-CCCCEEEEEECCCCCE-EEEEcCCCceeecccc
Confidence 666 222 2222 2567999999998764 4444 44578888864
No 84
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=92.80 E-value=0.78 Score=42.67 Aligned_cols=108 Identities=13% Similarity=0.116 Sum_probs=62.3
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEec
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSFT 447 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti~ 447 (499)
+|.| +++|+..+.|.|.|.++..-- ....+ ...-.-.|.+|+++|.+..+|++++.. ..+|+-+.
T Consensus 256 s~~~---~~l~~~~~dg~i~i~d~~~~~-------~~~~~----~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~ 321 (420)
T 3vl1_A 256 GTYG---KYVIAGHVSGVITVHNVFSKE-------QTIQL----PSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLR 321 (420)
T ss_dssp SCTT---EEEEEEETTSCEEEEETTTCC-------EEEEE----CCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred cCCC---CEEEEEcCCCeEEEEECCCCc-------eeEEc----ccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcC
Confidence 5544 355888899999999985311 01111 112335789999999886677776653 34444444
Q ss_pred CCCCcccceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 448 SGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 448 ~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
.... ....+.. ..+..|..+.|-++ + .|+... ...|+|||+..
T Consensus 322 ~~~~-~~~~~~~----~~~~~v~~~~~~~~-~-~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 322 SPEC-PVGEFLI----NEGTPINNVYFAAG-A-LFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp CTTS-CSEEEEE----STTSCEEEEEEETT-E-EEEEETTTEEEEEEEECC
T ss_pred CCcC-chhhhhc----cCCCCceEEEeCCC-C-EEEEecCCccEEEEeccC
Confidence 4222 2222222 23555666655443 3 454444 45799999875
No 85
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=92.59 E-value=1.6 Score=41.52 Aligned_cols=110 Identities=14% Similarity=0.211 Sum_probs=65.7
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccce-eEEEEec
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKE-CIVFSFT 447 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glke-C~Vlti~ 447 (499)
+|.| ..| +.+...+.|.|.++..- +...++ ...-.|..++++|.+.++||+++... ..|+-+.
T Consensus 174 ~p~~--~~l-~s~s~d~~v~iwd~~~~-------~~~~~~------~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~ 237 (393)
T 1erj_A 174 FPSG--DKL-VSGSGDRTVRIWDLRTG-------QCSLTL------SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSE 237 (393)
T ss_dssp CTTS--SEE-EEEETTSEEEEEETTTT-------EEEEEE------ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETT
T ss_pred cCCC--CEE-EEecCCCcEEEEECCCC-------eeEEEE------EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECC
Confidence 6666 345 55568899999988531 101111 12335889999998889999888653 3344333
Q ss_pred CCCCcccceeeecccc--CCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 448 SGMSQATDSITINPHC--ETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 448 ~~G~~v~d~l~i~l~l--~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
.|. ...++..+... .-...|..+.|-|..+ .|+... ...|+|||+..
T Consensus 238 -~~~-~~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 238 -TGF-LVERLDSENESGTGHKDSVYSVVFTRDGQ-SVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp -TCC-EEEEEC------CCCSSCEEEEEECTTSS-EEEEEETTSEEEEEEC--
T ss_pred -CCc-EEEeecccccCCCCCCCCEEEEEECCCCC-EEEEEeCCCEEEEEECCC
Confidence 244 44443322221 1246799999999876 455444 56899999864
No 86
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=92.41 E-value=1.4 Score=41.03 Aligned_cols=105 Identities=23% Similarity=0.264 Sum_probs=63.5
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccce-eEEEEec
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKE-CIVFSFT 447 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glke-C~Vlti~ 447 (499)
+|.|+ .| |+....|+|.|+++..- +...++.. -.-.|.+++++|.. ++||+++... ..|+-+.
T Consensus 131 spdg~--~l-~~g~~dg~v~i~~~~~~-------~~~~~~~~-----~~~~v~~~~~spdg-~~lasg~~dg~i~iwd~~ 194 (321)
T 3ow8_A 131 SPDSQ--YL-ATGTHVGKVNIFGVESG-------KKEYSLDT-----RGKFILSIAYSPDG-KYLASGAIDGIINIFDIA 194 (321)
T ss_dssp CTTSS--EE-EEECTTSEEEEEETTTC-------SEEEEEEC-----SSSCEEEEEECTTS-SEEEEEETTSCEEEEETT
T ss_pred CCCCC--EE-EEEcCCCcEEEEEcCCC-------ceeEEecC-----CCceEEEEEECCCC-CEEEEEcCCCeEEEEECC
Confidence 77663 45 77778999999987432 11112211 12358899999965 7888776553 3333332
Q ss_pred CCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeec-CceEEeecCC
Q psy11311 448 SGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTA-LNIKIYQLRP 497 (499)
Q Consensus 448 ~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~-~fVKIYDLs~ 497 (499)
.|+ ... .+.- ....|..+.|-|..+ .||.... ..|+|||+..
T Consensus 195 -~~~-~~~----~~~~-h~~~v~~l~~spd~~-~l~s~s~dg~i~iwd~~~ 237 (321)
T 3ow8_A 195 -TGK-LLH----TLEG-HAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDVQH 237 (321)
T ss_dssp -TTE-EEE----EECC-CSSCCCEEEECTTSC-EEEEECTTSCEEEEETTT
T ss_pred -CCc-EEE----EEcc-cCCceeEEEEcCCCC-EEEEEcCCCeEEEEECCC
Confidence 244 221 1111 246788999999866 4555444 5799999864
No 87
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=92.35 E-value=1.8 Score=40.16 Aligned_cols=104 Identities=13% Similarity=0.105 Sum_probs=62.4
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecC
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTS 448 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~ 448 (499)
+|.| . ++|++.+.|.|.|.++..-- .+..+........|.+++|+|.. .+||+. ..+-.|...+-
T Consensus 235 ~p~~--~-~l~s~s~d~~v~iwd~~~~~----------~~~~~~~~~~~~~v~~~~~s~~g-~~l~~g-~~d~~i~vwd~ 299 (340)
T 1got_B 235 FPNG--N-AFATGSDDATCRLFDLRADQ----------ELMTYSHDNIICGITSVSFSKSG-RLLLAG-YDDFNCNVWDA 299 (340)
T ss_dssp CTTS--S-EEEEEETTSCEEEEETTTTE----------EEEEECCTTCCSCEEEEEECTTS-SEEEEE-ETTSEEEEEET
T ss_pred cCCC--C-EEEEEcCCCcEEEEECCCCc----------EEEEEccCCcccceEEEEECCCC-CEEEEE-CCCCeEEEEEc
Confidence 6755 3 44777899999999985411 01122233344568999999965 555554 44444444442
Q ss_pred -CCCcccceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEee
Q psy11311 449 -GMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQ 494 (499)
Q Consensus 449 -~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYD 494 (499)
.++ ....+ . .-...|..+.|-|..+ .||... ...|||||
T Consensus 300 ~~~~-~~~~~----~-~h~~~v~~~~~s~dg~-~l~s~s~D~~i~iWd 340 (340)
T 1got_B 300 LKAD-RAGVL----A-GHDNRVSCLGVTDDGM-AVATGSWDSFLKIWN 340 (340)
T ss_dssp TTCC-EEEEE----E-CCSSCEEEEEECTTSS-CEEEEETTSCEEEEC
T ss_pred ccCc-EeeEe----e-cCCCcEEEEEEcCCCC-EEEEEcCCccEEecC
Confidence 243 21111 1 1256899999999866 454444 45899997
No 88
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=92.25 E-value=1.3 Score=46.76 Aligned_cols=119 Identities=16% Similarity=0.215 Sum_probs=72.2
Q ss_pred eeccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCC------------Ccce
Q psy11311 365 CILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPC------------NEEL 432 (499)
Q Consensus 365 c~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~------------ne~~ 432 (499)
|+--+|.+....| |++...|.|.|.++..--. ........-+..|.+++++|. +.++
T Consensus 104 ~v~~sp~~~~~~l-~sgs~dg~I~vwdl~~~~~----------~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~ 172 (753)
T 3jro_A 104 SVQWAPHEYGPLL-LVASSDGKVSVVEFKENGT----------TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRK 172 (753)
T ss_dssp EEEECCGGGCSEE-EEEETTSEEEEEECCSSSC----------CCCEEEECCSSCEEEEEECCCC---------CGGGCC
T ss_pred EEEECCCCCCCEE-EEEeCCCcEEEEEeecCCC----------cceeEeecCCCceEEEEecCcccccccccccCCCCCE
Confidence 3334666323444 7777999999999854210 111122344667999999997 5677
Q ss_pred eeeeccc-eeEEEEecCCCCcccceeeeccccCCCceeEeeEEecCC--CceEEEee-cCceEEeecCC
Q psy11311 433 LAVCGLK-ECIVFSFTSGMSQATDSITINPHCETSNYIIKALWIPGR--QSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 433 LAV~Glk-eC~Vlti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgs--q~~LAVvT-~~fVKIYDLs~ 497 (499)
|+++|-. ..+|+.+..... .-.+...+. .....|..+.|-|.. ...|+... ...|+|||+..
T Consensus 173 l~sgs~dg~I~iwd~~~~~~--~~~~~~~~~-~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 173 FVTGGADNLVKIWKYNSDAQ--TYVLESTLE-GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp EEEEETTSCEEEEEEETTTT--EEEEEEEEC-CCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESS
T ss_pred EEEEECCCeEEEEeccCCcc--cceeeeeec-CCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCC
Confidence 7777654 355665655332 111111111 126789999999984 33555555 45799999875
No 89
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=92.23 E-value=2.1 Score=39.02 Aligned_cols=110 Identities=15% Similarity=0.168 Sum_probs=64.1
Q ss_pred cCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEe
Q psy11311 368 SSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSF 446 (499)
Q Consensus 368 ~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti 446 (499)
-+|.+ ..| |.+...+.|-|.++..-... ..++. .-.-.|.+++|+|.+..+||.+|.. ..+|.-+
T Consensus 105 ~~~~~--~~l-~sgs~D~~v~lWd~~~~~~~------~~~~~-----~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~ 170 (304)
T 2ynn_A 105 VHPTK--PYV-LSGSDDLTVKLWNWENNWAL------EQTFE-----GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSL 170 (304)
T ss_dssp ECSSS--SEE-EEEETTSCEEEEEGGGTTEE------EEEEC-----CCCSCEEEEEECTTCTTEEEEEETTSEEEEEET
T ss_pred EcCCC--CEE-EEECCCCeEEEEECCCCcch------hhhhc-----ccCCcEEEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence 36655 334 66679999999998531100 00111 1234588999999888888888765 4455555
Q ss_pred cCCCCcccceeeeccccCCCceeEeeEEecCCCc-eEEEee-cCceEEeecCC
Q psy11311 447 TSGMSQATDSITINPHCETSNYIIKALWIPGRQS-TLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 447 ~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~-~LAVvT-~~fVKIYDLs~ 497 (499)
..... ...+. .....-|..+.|.|.... .|+... ...|+|||+..
T Consensus 171 ~~~~~----~~~~~--~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~ 217 (304)
T 2ynn_A 171 GQSTP----NFTLT--TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT 217 (304)
T ss_dssp TCSSC----SEEEE--CCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTT
T ss_pred CCCCc----cceec--cCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCC
Confidence 43222 12221 122345677788874333 444443 45799999864
No 90
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=92.18 E-value=1.2 Score=45.68 Aligned_cols=113 Identities=18% Similarity=0.225 Sum_probs=68.1
Q ss_pred eccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEE
Q psy11311 366 ILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFS 445 (499)
Q Consensus 366 ~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlt 445 (499)
+--||.|+ ++|.....|.|.|.++..-- ++......-.|.+++++|.. .+|+.++-...+|.-
T Consensus 567 v~~spdg~---~l~sg~~Dg~i~iwd~~~~~-------------~~~~~~~~~~v~~~~~sp~~-~~l~~~~~~~i~iwd 629 (694)
T 3dm0_A 567 VAVSPDGS---LCASGGKDGVVLLWDLAEGK-------------KLYSLEANSVIHALCFSPNR-YWLCAATEHGIKIWD 629 (694)
T ss_dssp EEECTTSS---EEEEEETTSBCEEEETTTTE-------------EEECCBCSSCEEEEEECSSS-SEEEEEETTEEEEEE
T ss_pred EEEeCCCC---EEEEEeCCCeEEEEECCCCc-------------eEEEecCCCcEEEEEEcCCC-cEEEEEcCCCEEEEE
Confidence 33466553 44777788999999985311 11111123358889999954 677776666666666
Q ss_pred ecCCCCcccceeeeccccC--------------CCceeEeeEEecCCCceEEEeecCceEEeecCC
Q psy11311 446 FTSGMSQATDSITINPHCE--------------TSNYIIKALWIPGRQSTLAIVTALNIKIYQLRP 497 (499)
Q Consensus 446 i~~~G~~v~d~l~i~l~l~--------------~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~ 497 (499)
+.. ++ +...+.+++... .-.++..+.|-|..+..+.--....|+|||+..
T Consensus 630 ~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 630 LES-KS-IVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp TTT-TE-EEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CCC-CC-ChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEeccC
Confidence 654 44 444454443221 124688999999877433334566899999864
No 91
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=92.16 E-value=2.9 Score=38.55 Aligned_cols=120 Identities=11% Similarity=0.066 Sum_probs=65.2
Q ss_pred cCcccccceEEEEeecCCeEEEeehhhhcccccccccc-cccc---cccccccceeEEEeeecCCCcceeeeeccce--e
Q psy11311 368 SSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRK-LTLI---KLASVSLPITILSVEANPCNEELLAVCGLKE--C 441 (499)
Q Consensus 368 ~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~K-ltl~---rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glke--C 441 (499)
.+|.|+ .|++.....+.|.++++..--+ ..+.+ ++.. +.........+-+++++|.. ++|+|++..+ .
T Consensus 162 ~spdg~--~l~~~~~~~~~v~v~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~v~~~~~~~v 235 (361)
T 3scy_A 162 ITPDGK--YLLADDLGTDQIHKFNINPNAN---ADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDG-KFAYLINEIGGTV 235 (361)
T ss_dssp ECTTSS--EEEEEETTTTEEEEEEECTTCC---TTTCCCCEEEEEEEEEECCTTCCEEEEEECTTS-SEEEEEETTTCEE
T ss_pred ECCCCC--EEEEEeCCCCEEEEEEEcCCCC---cccccceeecccccceecCCCCCCeEEEEcCCC-CEEEEEcCCCCeE
Confidence 377774 3534433468899998752100 00001 2111 11122233445689999966 6788887544 4
Q ss_pred EEEEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeec---CceEEeecC
Q psy11311 442 IVFSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTA---LNIKIYQLR 496 (499)
Q Consensus 442 ~Vlti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~---~fVKIYDLs 496 (499)
.|+.+. .|. +.....+............+.|=|..+ .|+++.. ..|+|||+.
T Consensus 236 ~v~~~~-~g~-~~~~~~~~~~~~~~~~~~~i~~spdg~-~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 236 IAFRYA-DGM-LDEIQTVAADTVNAQGSGDIHLSPDGK-YLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EEEEEE-TTE-EEEEEEEESCSSCCCCEEEEEECTTSS-EEEEEECSSSCEEEEEEEC
T ss_pred EEEEec-CCc-eEEeEEEecCCCCCCCcccEEECCCCC-EEEEECCCCCCEEEEEEEc
Confidence 455555 455 433222322222235567888999866 4555443 479999986
No 92
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=92.08 E-value=1.6 Score=39.82 Aligned_cols=103 Identities=12% Similarity=0.118 Sum_probs=63.5
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecC
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTS 448 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~ 448 (499)
+|.|+ ++|++.+.+.|.|+++... +...++. .-.-.|.+++++|.+ +|++++. +..|..++-
T Consensus 256 ~~~~~---~l~~~~~d~~i~i~d~~~~-------~~~~~~~-----~~~~~i~~~~~~~~~--~l~~~~~-d~~i~i~d~ 317 (425)
T 1r5m_A 256 NDTNK---LLLSASDDGTLRIWHGGNG-------NSQNCFY-----GHSQSIVSASWVGDD--KVISCSM-DGSVRLWSL 317 (425)
T ss_dssp ETTTT---EEEEEETTSCEEEECSSSB-------SCSEEEC-----CCSSCEEEEEEETTT--EEEEEET-TSEEEEEET
T ss_pred CCCCC---EEEEEcCCCEEEEEECCCC-------ccceEec-----CCCccEEEEEECCCC--EEEEEeC-CCcEEEEEC
Confidence 55553 4477789999999997531 1111111 123468899999966 6655554 444555553
Q ss_pred -CCCcccceeeeccccCCCceeEeeEEecCCCceEEEeec-CceEEeecC
Q psy11311 449 -GMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTA-LNIKIYQLR 496 (499)
Q Consensus 449 -~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~-~fVKIYDLs 496 (499)
.|+ ... .+.. ....|..+.|-|..+ .|++.+. ..|+|||+.
T Consensus 318 ~~~~-~~~----~~~~-~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 318 KQNT-LLA----LSIV-DGVPIFAGRISQDGQ-KYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp TTTE-EEE----EEEC-TTCCEEEEEECTTSS-EEEEEETTSCEEEEECH
T ss_pred CCCc-EeE----eccc-CCccEEEEEEcCCCC-EEEEEECCCeEEEEECC
Confidence 244 222 1221 256789999999866 5666664 489999985
No 93
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=92.02 E-value=1.8 Score=42.30 Aligned_cols=102 Identities=19% Similarity=0.264 Sum_probs=64.8
Q ss_pred cCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEec
Q psy11311 368 SSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFT 447 (499)
Q Consensus 368 ~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~ 447 (499)
-||.|+ +||++.+.+.|.|.++..=+ +..+.. -.-.|.+|+|+|-. ++||.+| .|..|...+
T Consensus 475 ~spd~~---~las~~~d~~i~iw~~~~~~-----------~~~~~~--h~~~v~~l~~s~dg-~~l~s~~-~dg~v~lwd 536 (577)
T 2ymu_A 475 FSPDGQ---TIASASDDKTVKLWNRNGQL-----------LQTLTG--HSSSVRGVAFSPDG-QTIASAS-DDKTVKLWN 536 (577)
T ss_dssp ECTTSC---EEEEEETTSEEEEEETTSCE-----------EEEEEC--CSSCEEEEEECTTS-SCEEEEE-TTSEEEEEC
T ss_pred EcCCCC---EEEEEeCCCEEEEEcCCCCE-----------EEEEeC--CCCCEEEEEEcCCC-CEEEEEE-CcCEEEEEe
Confidence 377664 45887899999999853211 111111 12358899999955 6787766 455666677
Q ss_pred CCCCcccceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEee
Q psy11311 448 SGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQ 494 (499)
Q Consensus 448 ~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYD 494 (499)
-.|+ ....+.- -..-|..+.|-|..+ +|+-+. ...|+|||
T Consensus 537 ~~~~-~~~~~~~-----h~~~v~~~~fs~dg~-~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 537 RNGQ-LLQTLTG-----HSSSVWGVAFSPDGQ-TIASASSDKTVKLWN 577 (577)
T ss_dssp TTSC-EEEEEEC-----CSSCEEEEEECTTSS-CEEEEETTSCEEEEC
T ss_pred CCCC-EEEEEcC-----CCCCEEEEEEcCCCC-EEEEEeCCCEEEEeC
Confidence 7777 3222221 256789999999876 444343 45799998
No 94
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=92.01 E-value=1.1 Score=41.10 Aligned_cols=112 Identities=18% Similarity=0.122 Sum_probs=60.3
Q ss_pred cCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEe
Q psy11311 368 SSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSF 446 (499)
Q Consensus 368 ~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti 446 (499)
-+|.| +.| |.+.+.+.|.|.++..-- .-+...++ ..-.-.|..++++| +.++||+++.. ...|..+
T Consensus 63 ~s~~~--~~l-~s~s~d~~v~vwd~~~~~----~~~~~~~~-----~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~ 129 (377)
T 3dwl_C 63 WAPKS--NRI-VTCSQDRNAYVYEKRPDG----TWKQTLVL-----LRLNRAATFVRWSP-NEDKFAVGSGARVISVCYF 129 (377)
T ss_dssp ECTTT--CCE-EEEETTSSEEEC----------CCCCEEEC-----CCCSSCEEEEECCT-TSSCCEEEESSSCEEECCC
T ss_pred EeCCC--CEE-EEEeCCCeEEEEEcCCCC----ceeeeeEe-----cccCCceEEEEECC-CCCEEEEEecCCeEEEEEE
Confidence 36665 345 666788999999985421 00001111 12344689999999 45677777654 2334334
Q ss_pred cCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeec-CceEEeecC
Q psy11311 447 TSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTA-LNIKIYQLR 496 (499)
Q Consensus 447 ~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~-~fVKIYDLs 496 (499)
..... .. +.-.+.-.....|..+.|-|..+ .|+.... ..|+|||+.
T Consensus 130 ~~~~~-~~--~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 130 EQEND-WW--VSKHLKRPLRSTILSLDWHPNNV-LLAAGCADRKAYVLSAY 176 (377)
T ss_dssp ------CC--CCEEECSSCCSCEEEEEECTTSS-EEEEEESSSCEEEEEEC
T ss_pred CCccc-ce--eeeEeecccCCCeEEEEEcCCCC-EEEEEeCCCEEEEEEEE
Confidence 33221 00 11111211367899999999866 5665554 579999985
No 95
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=91.87 E-value=1.5 Score=44.76 Aligned_cols=110 Identities=17% Similarity=0.286 Sum_probs=69.6
Q ss_pred eccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEE
Q psy11311 366 ILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVF 444 (499)
Q Consensus 366 ~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vl 444 (499)
+-.||.|+ ++|+..+.++|-|.++..-. +..+....-+-.|.+|+|+|-. ++||.++.. ...+.
T Consensus 454 va~spdg~---~lasgs~D~~v~lwd~~~~~-----------~~~~~~~~h~~~v~~v~fspdg-~~las~s~d~~v~~w 518 (611)
T 1nr0_A 454 VALSNDKQ---FVAVGGQDSKVHVYKLSGAS-----------VSEVKTIVHPAEITSVAFSNNG-AFLVATDQSRKVIPY 518 (611)
T ss_dssp EEECTTSC---EEEEEETTSEEEEEEEETTE-----------EEEEEEEECSSCEEEEEECTTS-SEEEEEETTSCEEEE
T ss_pred EEEeCCCC---EEEEeCCCCeEEEEEccCCc-----------eeeeeccCCCCceEEEEECCCC-CEEEEEcCCCCEEEE
Confidence 33477663 55888899999999985310 0111112234579999999965 788877764 45555
Q ss_pred EecCCCCcccceeeeccccC--CCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 445 SFTSGMSQATDSITINPHCE--TSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 445 ti~~~G~~v~d~l~i~l~l~--~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
.+...|+ + +...+. -...|..+.|-|..+ .||... ...|||||+..
T Consensus 519 ~~~~~~~-~-----~~~~~~~~H~~~V~~v~fspdg~-~lasgs~D~~v~lW~~~~ 567 (611)
T 1nr0_A 519 SVANNFE-L-----AHTNSWTFHTAKVACVSWSPDNV-RLATGSLDNSVIVWNMNK 567 (611)
T ss_dssp EGGGTTE-E-----SCCCCCCCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTC
T ss_pred EcCCCCc-e-----eeeeeeeecccceeEEEECCCCC-EEEEEECCCcEEEEECCC
Confidence 5555455 2 111111 257899999999977 455544 45799999864
No 96
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=91.71 E-value=1.6 Score=41.41 Aligned_cols=71 Identities=17% Similarity=0.153 Sum_probs=45.6
Q ss_pred eEEEeeecCCCcceeeeeccc-eeEEEEecCCCCcccceeeeccccC-CCceeEeeEEecCCCceEEEeecCceEEeecC
Q psy11311 419 TILSVEANPCNEELLAVCGLK-ECIVFSFTSGMSQATDSITINPHCE-TSNYIIKALWIPGRQSTLAIVTALNIKIYQLR 496 (499)
Q Consensus 419 ~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti~~~G~~v~d~l~i~l~l~-~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs 496 (499)
.|.+|+|+|.. ++||+++.. ...|+-+. +|+ . +.--+. -...|..+.|=|..+..+..-....||||||.
T Consensus 271 ~V~~~~~Spdg-~~lasgs~D~~V~iwd~~-~~~-----~-~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 271 GITSMDVDMKG-ELAVLASNDNSIALVKLK-DLS-----M-SKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp CEEEEEECTTS-CEEEEEETTSCEEEEETT-TTE-----E-EEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred CeEeEEECCCC-CceEEEcCCCEEEEEECC-CCc-----E-EEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 48899999955 788877764 23444333 244 1 111122 25789999999997743333445689999995
Q ss_pred C
Q psy11311 497 P 497 (499)
Q Consensus 497 ~ 497 (499)
+
T Consensus 343 ~ 343 (365)
T 4h5i_A 343 L 343 (365)
T ss_dssp T
T ss_pred C
Confidence 4
No 97
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=91.53 E-value=2.2 Score=40.18 Aligned_cols=115 Identities=16% Similarity=0.030 Sum_probs=58.2
Q ss_pred EEEEeecCCeEEEeehhhhcc-cccccccccccccccccc--cceeEEEeeecCCCcceeeeeccceeEEEEecCC-CCc
Q psy11311 377 LVAVSHEKGKITLLQLSGLLK-QIDSSKRKLTLIKLASVS--LPITILSVEANPCNEELLAVCGLKECIVFSFTSG-MSQ 452 (499)
Q Consensus 377 LvAVshEk~KVtllqls~LLk-qadss~~Kltl~rLs~~~--VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~~-G~~ 452 (499)
++|++.+.|.|.|.++..-.. +.-...+...+..+.-.+ ..-.++.+.+.+..+.-+.++|-.+..|...+-+ |+
T Consensus 125 ~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~- 203 (437)
T 3gre_A 125 AFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLE- 203 (437)
T ss_dssp EEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCC-
T ss_pred EEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe-
Confidence 447778999999998842100 000000001122222111 2334555553322233344444445555555542 33
Q ss_pred ccceeeeccccC-CCceeEeeEEecCCCceEEEeecC-ceEEeecCC
Q psy11311 453 ATDSITINPHCE-TSNYIIKALWIPGRQSTLAIVTAL-NIKIYQLRP 497 (499)
Q Consensus 453 v~d~l~i~l~l~-~~~fIik~~Wipgsq~~LAVvT~~-fVKIYDLs~ 497 (499)
. ...+... ....|..+.|-|..+ .|+..+.+ .|+|||+..
T Consensus 204 ~----~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~ 245 (437)
T 3gre_A 204 R----LQIIENSPRHGAVSSICIDEECC-VLILGTTRGIIDIWDIRF 245 (437)
T ss_dssp E----EEEEECCGGGCCEEEEEECTTSC-EEEEEETTSCEEEEETTT
T ss_pred e----eEEEccCCCCCceEEEEECCCCC-EEEEEcCCCeEEEEEcCC
Confidence 2 2222221 246899999999855 56655554 599999864
No 98
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=91.48 E-value=1.5 Score=45.12 Aligned_cols=118 Identities=9% Similarity=0.080 Sum_probs=70.1
Q ss_pred eeccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCC---Ccceeeeecccee
Q psy11311 365 CILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPC---NEELLAVCGLKEC 441 (499)
Q Consensus 365 c~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~---ne~~LAV~GlkeC 441 (499)
++..||.|+ .| +|+.+++.|+++++.. -|.+.+....+.-.+-+|+++|. +.++|+|+++.+.
T Consensus 183 ~v~~spdg~--~l-~v~~~d~~V~v~D~~~-----------~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~ 248 (543)
T 1nir_A 183 ISRMSASGR--YL-LVIGRDARIDMIDLWA-----------KEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPP 248 (543)
T ss_dssp EEEECTTSC--EE-EEEETTSEEEEEETTS-----------SSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESS
T ss_pred eEEECCCCC--EE-EEECCCCeEEEEECcC-----------CCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCC
Confidence 343588774 35 6667889999999920 01122333345566789999993 6689999999888
Q ss_pred EEEEecC-CCCcccceeeecccc-C-----CCceeEeeEEecCCCc-eEEEeecCceEEeecCC
Q psy11311 442 IVFSFTS-GMSQATDSITINPHC-E-----TSNYIIKALWIPGRQS-TLAIVTALNIKIYQLRP 497 (499)
Q Consensus 442 ~Vlti~~-~G~~v~d~l~i~l~l-~-----~~~fIik~~Wipgsq~-~LAVvT~~fVKIYDLs~ 497 (499)
.|..++. .++ +...+.++..- + .+..+..+.+-|.... ..++--...|.+||++.
T Consensus 249 ~v~v~D~~t~~-~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~ 311 (543)
T 1nir_A 249 QFAIMDGETLE-PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKD 311 (543)
T ss_dssp EEEEEETTTCC-EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTT
T ss_pred eEEEEeccccc-cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecC
Confidence 8877753 455 55555543211 0 1234555666664331 11111245688888754
No 99
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=91.43 E-value=3.1 Score=37.35 Aligned_cols=106 Identities=16% Similarity=0.164 Sum_probs=64.5
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEec
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSFT 447 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti~ 447 (499)
+|.|+ .| |.+...|.|.|.++..- +- +..+. .-...|.+|+++|.. ++||.+|.. ...|.-+.
T Consensus 32 s~~~~--~l-~s~~~dg~i~iw~~~~~-------~~---~~~~~--~h~~~v~~~~~~~~~-~~l~s~~~d~~i~vwd~~ 95 (312)
T 4ery_A 32 SPNGE--WL-ASSSADKLIKIWGAYDG-------KF---EKTIS--GHKLGISDVAWSSDS-NLLVSASDDKTLKIWDVS 95 (312)
T ss_dssp CTTSS--EE-EEEETTSCEEEEETTTC-------CE---EEEEC--CCSSCEEEEEECTTS-SEEEEEETTSEEEEEETT
T ss_pred CCCCC--EE-EEeeCCCeEEEEeCCCc-------cc---chhhc--cCCCceEEEEEcCCC-CEEEEECCCCEEEEEECC
Confidence 66553 34 77778999999986321 00 11111 223458899999954 677776654 44555544
Q ss_pred CCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecCceEEeecCC
Q psy11311 448 SGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLRP 497 (499)
Q Consensus 448 ~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~ 497 (499)
. |+ .... +. ....+|..+.|-|..+..+.......|+|||+..
T Consensus 96 ~-~~-~~~~----~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 138 (312)
T 4ery_A 96 S-GK-CLKT----LK-GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 138 (312)
T ss_dssp T-CC-EEEE----EE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred C-Cc-EEEE----Ec-CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Confidence 3 33 2211 11 1367899999999876433334467899999864
No 100
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=91.34 E-value=0.66 Score=41.20 Aligned_cols=105 Identities=12% Similarity=0.129 Sum_probs=62.3
Q ss_pred EEEEeecCCeEEEeehhhhcccccccccccccccccccccce---eEEEeeecCCCcceeeeeccceeEEEEecC-CCCc
Q psy11311 377 LVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPI---TILSVEANPCNEELLAVCGLKECIVFSFTS-GMSQ 452 (499)
Q Consensus 377 LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF---~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~-~G~~ 452 (499)
++++....+.|.++++... +.+....++- .+..++++|.. ++|+|++..+-.|..++. .|+
T Consensus 3 ~~v~~~~~~~v~~~d~~~~-------------~~~~~~~~~~~~~~~~~~~~s~dg-~~l~v~~~~~~~v~~~d~~~~~- 67 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKM-------------AVDKVITIADAGPTPMVPMVAPGG-RIAYATVNKSESLVKIDLVTGE- 67 (337)
T ss_dssp EEEEEETTTEEEEEETTTT-------------EEEEEEECTTCTTCCCCEEECTTS-SEEEEEETTTTEEEEEETTTCC-
T ss_pred EEEEcCCCCeEEEEECCCC-------------cEEEEEEcCCCCCCccceEEcCCC-CEEEEEeCCCCeEEEEECCCCC-
Confidence 3355567889999987431 0011111122 34567888865 577777777777777774 455
Q ss_pred ccceeeeccccCCCceeEeeEEecCCCceEEEee-------------cCceEEeecCC
Q psy11311 453 ATDSITINPHCETSNYIIKALWIPGRQSTLAIVT-------------ALNIKIYQLRP 497 (499)
Q Consensus 453 v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-------------~~fVKIYDLs~ 497 (499)
+..++.+...-..+..+..+.|-|..+ .|+++. ...|.+||+..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~ 124 (337)
T 1pby_B 68 TLGRIDLSTPEERVKSLFGAALSPDGK-TLAIYESPVRLELTHFEVQPTRVALYDAET 124 (337)
T ss_dssp EEEEEECCBTTEEEECTTCEEECTTSS-EEEEEEEEEEECSSCEEECCCEEEEEETTT
T ss_pred eEeeEEcCCcccccccccceEECCCCC-EEEEEecccccccccccccCceEEEEECCC
Confidence 555554432000122456688888755 566663 48899999864
No 101
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=91.27 E-value=2.1 Score=40.03 Aligned_cols=105 Identities=14% Similarity=0.088 Sum_probs=66.5
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc---------
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK--------- 439 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk--------- 439 (499)
+|.|+ .|++.....+.|.++++..- + .+...+..-.+.+++++|.. ++|++++..
T Consensus 311 ~~~g~--~l~~~~~~~~~v~v~d~~~~-------~------~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~ 374 (433)
T 3bws_A 311 GNTEN--KIYVSDMCCSKIEVYDLKEK-------K------VQKSIPVFDKPNTIALSPDG-KYLYVSCRGPNHPTEGYL 374 (433)
T ss_dssp CSSTT--EEEEEETTTTEEEEEETTTT-------E------EEEEEECSSSEEEEEECTTS-SEEEEEECCCCCTTTCTT
T ss_pred CCCCC--EEEEEecCCCEEEEEECCCC-------c------EEEEecCCCCCCeEEEcCCC-CEEEEEecCCCccccccc
Confidence 66653 46455568899999998521 0 01111234457799999875 677777654
Q ss_pred -----eeEEEEecC-CCCcccceeeeccccCCCceeEeeEEecCCCceEEEee--cCceEEeecCC
Q psy11311 440 -----ECIVFSFTS-GMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT--ALNIKIYQLRP 497 (499)
Q Consensus 440 -----eC~Vlti~~-~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT--~~fVKIYDLs~ 497 (499)
+-.|..++. .|+ +...+. .+..+..+.|-|..+ .|++.. ...|+|||+..
T Consensus 375 ~~g~~dg~v~~~d~~~~~-~~~~~~------~~~~~~~~~~s~dg~-~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 375 KKGLVLGKVYVIDTTTDT-VKEFWE------AGNQPTGLDVSPDNR-YLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp SCCSSCCEEEEEETTTTE-EEEEEE------CSSSEEEEEECTTSC-EEEEEETTTTEEEEEEETT
T ss_pred cccccceEEEEEECCCCc-EEEEec------CCCCCceEEEcCCCC-EEEEEECCCCeEEEEEecC
Confidence 236666664 344 333222 256788999999865 566554 68999999863
No 102
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=91.01 E-value=2.9 Score=38.52 Aligned_cols=111 Identities=11% Similarity=0.051 Sum_probs=64.5
Q ss_pred CcccccceEEEEee-cCCeEEEeehhhhcccccccccccccccccccccc-eeEEEeeecCCCcceeeeeccc---eeEE
Q psy11311 369 SPQSKRQHLVAVSH-EKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLP-ITILSVEANPCNEELLAVCGLK---ECIV 443 (499)
Q Consensus 369 sp~g~rq~LvAVsh-Ek~KVtllqls~LLkqadss~~Kltl~rLs~~~Vp-F~Vlsl~~NP~ne~~LAV~Glk---eC~V 443 (499)
||.|+ .| +|+. ..+.|.++++.. + .. ..+..+...+.. -....|+++|-. ++|+|++-. ...|
T Consensus 219 spdg~--~l-~v~~~~~~~v~v~~~~~--g----~~--~~~~~~~~~~~~~~~~~~i~~spdg-~~l~v~~~~~~~~i~v 286 (361)
T 3scy_A 219 NSDGK--FA-YLINEIGGTVIAFRYAD--G----ML--DEIQTVAADTVNAQGSGDIHLSPDG-KYLYASNRLKADGVAI 286 (361)
T ss_dssp CTTSS--EE-EEEETTTCEEEEEEEET--T----EE--EEEEEEESCSSCCCCEEEEEECTTS-SEEEEEECSSSCEEEE
T ss_pred cCCCC--EE-EEEcCCCCeEEEEEecC--C----ce--EEeEEEecCCCCCCCcccEEECCCC-CEEEEECCCCCCEEEE
Confidence 78774 35 5555 478999999851 0 00 001112111111 123688999976 677776654 5777
Q ss_pred EEecC-CCCcccceeeeccccCCCceeEeeEEecCCCceEEEee--cCceEEeecCC
Q psy11311 444 FSFTS-GMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT--ALNIKIYQLRP 497 (499)
Q Consensus 444 lti~~-~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT--~~fVKIYDLs~ 497 (499)
+.++. .|. .. .--.+..+..++.+.|=|..+ .|+++. +..|+||++..
T Consensus 287 ~~~~~~~g~-~~----~~~~~~~g~~~~~~~~spdg~-~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 287 FKVDETNGT-LT----KVGYQLTGIHPRNFIITPNGK-YLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp EEECTTTCC-EE----EEEEEECSSCCCEEEECTTSC-EEEEEETTTTEEEEEEECT
T ss_pred EEEcCCCCc-EE----EeeEecCCCCCceEEECCCCC-EEEEEECCCCCEEEEEEEC
Confidence 77873 455 22 111222267888899998865 566554 46799976653
No 103
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=90.94 E-value=2.5 Score=38.56 Aligned_cols=113 Identities=14% Similarity=0.123 Sum_probs=66.3
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccc-cccccccccc----eeEEEeeecCCCcceeeeecc--cee
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLT-LIKLASVSLP----ITILSVEANPCNEELLAVCGL--KEC 441 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Klt-l~rLs~~~Vp----F~Vlsl~~NP~ne~~LAV~Gl--keC 441 (499)
+|.|+ .|+++....+.|.|+++..- ..+++ +..+...+.. ..+..|+++|.. ++|+|++- ...
T Consensus 195 spdg~--~l~v~~~~~~~v~v~~~~~~-------~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG-~~l~v~~~~~~~v 264 (347)
T 3hfq_A 195 SPDGQ--YAFLAGELSSQIASLKYDTQ-------TGAFTQLGIVKTIPADYTAHNGAAAIRLSHDG-HFLYVSNRGYNTL 264 (347)
T ss_dssp CTTSS--EEEEEETTTTEEEEEEEETT-------TTEEEEEEEEESSCTTCCSCCEEEEEEECTTS-CEEEEEEETTTEE
T ss_pred CCCCC--EEEEEeCCCCEEEEEEecCC-------CCceEEeeeeeecCCCCCCCCcceeEEECCCC-CEEEEEeCCCCEE
Confidence 77774 36444456778999887420 01111 1122222221 457789999976 67777665 456
Q ss_pred EEEEecCCCCcccceeeeccccC-CCceeEeeEEecCCCceEEEeec--CceEEeecCC
Q psy11311 442 IVFSFTSGMSQATDSITINPHCE-TSNYIIKALWIPGRQSTLAIVTA--LNIKIYQLRP 497 (499)
Q Consensus 442 ~Vlti~~~G~~v~d~l~i~l~l~-~~~fIik~~Wipgsq~~LAVvT~--~fVKIYDLs~ 497 (499)
.|+.++.+|. .. .--.+. .+.++..+.|=|..+ .|+++.. ..|+||++..
T Consensus 265 ~v~~~~~~g~-~~----~~~~~~~~~~~~~~~~~spdg~-~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 265 AVFAVTADGH-LT----LIQQISTEGDFPRDFDLDPTEA-FVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp EEEEECGGGC-EE----EEEEEECSSSCCCEEEECTTSS-EEEEEETTTTEEEEEEECT
T ss_pred EEEEECCCCc-EE----EeEEEecCCCCcCeEEECCCCC-EEEEEEcCCCcEEEEEEeC
Confidence 7777776665 22 111122 266788899988865 5666543 6799996643
No 104
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=90.87 E-value=3.7 Score=37.29 Aligned_cols=109 Identities=9% Similarity=0.142 Sum_probs=66.2
Q ss_pred EEEEeecCCeEEEeehhhhcccccccccccc-cccccccccceeEEEeeecCCC--cceeeeeccc-eeEEEEecCCCCc
Q psy11311 377 LVAVSHEKGKITLLQLSGLLKQIDSSKRKLT-LIKLASVSLPITILSVEANPCN--EELLAVCGLK-ECIVFSFTSGMSQ 452 (499)
Q Consensus 377 LvAVshEk~KVtllqls~LLkqadss~~Klt-l~rLs~~~VpF~Vlsl~~NP~n--e~~LAV~Glk-eC~Vlti~~~G~~ 452 (499)
++|.+.+.+.|-|.++..--. ... +..|. .-.-.|.+|+|+|.. ..+||.+|.. .+.|..+.....
T Consensus 172 ~l~sgs~D~~v~lwd~~~~~~-------~~~~~~~l~--~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~- 241 (297)
T 2pm7_B 172 KFVTGGADNLVKIWKYNSDAQ-------TYVLESTLE--GHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQG- 241 (297)
T ss_dssp EEEEEETTSCEEEEEEETTTT-------EEEEEEEEC--CCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS-
T ss_pred eEEEEcCCCcEEEEEEcCCCc-------eEEEEEEec--CCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCC-
Confidence 447778999999999753110 000 01111 112358999999975 5788888875 567776665321
Q ss_pred ccceeeeccccCCCceeEeeEEecCCCceEEEeec-CceEEeecCC
Q psy11311 453 ATDSITINPHCETSNYIIKALWIPGRQSTLAIVTA-LNIKIYQLRP 497 (499)
Q Consensus 453 v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~-~fVKIYDLs~ 497 (499)
......+.. ......|..+.|-|..+ .||.... ..|+||+...
T Consensus 242 ~~~~~~~~~-~~~~~~v~~~~~s~~g~-~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 242 PWKKTLLKE-EKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKENL 285 (297)
T ss_dssp CCEEEESSS-SCCSSCEEEEEECSSSC-CEEEEETTSCEEEEEECT
T ss_pred ccceeeeec-ccCCCcEEEEEECCCCC-EEEEEcCCCcEEEEEECC
Confidence 111111111 11256799999999866 5666554 5799999864
No 105
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=90.66 E-value=3.3 Score=37.20 Aligned_cols=108 Identities=12% Similarity=0.172 Sum_probs=66.4
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecC
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTS 448 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~ 448 (499)
+|.|+ .| +|+.+.++|.++++..-- .+...+.....-...+.+|+++|.. ++|+|.+..+-.|..++.
T Consensus 193 s~dg~--~l-~~~~~~~~i~~~d~~~~~--------~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~v~~~d~ 260 (353)
T 3vgz_A 193 DSEGK--RL-YTTNADGELITIDTADNK--------ILSRKKLLDDGKEHFFINISLDTAR-QRAFITDSKAAEVLVVDT 260 (353)
T ss_dssp ETTTT--EE-EEECTTSEEEEEETTTTE--------EEEEEECCCSSSCCCEEEEEEETTT-TEEEEEESSSSEEEEEET
T ss_pred CCCCC--EE-EEEcCCCeEEEEECCCCe--------EEEEEEcCCCCCCcccceEEECCCC-CEEEEEeCCCCEEEEEEC
Confidence 66664 35 666788999998874311 1111112122224457788999965 677888777777777776
Q ss_pred -CCCcccceeeeccccCCCceeEeeEEecCCCceEEEee--cCceEEeecCC
Q psy11311 449 -GMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT--ALNIKIYQLRP 497 (499)
Q Consensus 449 -~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT--~~fVKIYDLs~ 497 (499)
.|+ +...+.+.- . ..+.|-|..+ .|.|+. +..|.+||+..
T Consensus 261 ~~~~-~~~~~~~~~----~---~~~~~s~dg~-~l~v~~~~~~~v~~~d~~~ 303 (353)
T 3vgz_A 261 RNGN-ILAKVAAPE----S---LAVLFNPARN-EAYVTHRQAGKVSVIDAKS 303 (353)
T ss_dssp TTCC-EEEEEECSS----C---CCEEEETTTT-EEEEEETTTTEEEEEETTT
T ss_pred CCCc-EEEEEEcCC----C---ceEEECCCCC-EEEEEECCCCeEEEEECCC
Confidence 455 555555321 1 3478888765 455554 47899999864
No 106
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=90.56 E-value=1.8 Score=47.12 Aligned_cols=112 Identities=13% Similarity=0.176 Sum_probs=72.4
Q ss_pred eeeccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEE
Q psy11311 364 MCILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIV 443 (499)
Q Consensus 364 mc~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~V 443 (499)
.|+--||.|+ ++|++...+.|.|.++..- +...+++ .-...|..++|+|..+..+++.|-.+..|
T Consensus 661 ~~~~~s~~~~---~l~s~~~d~~v~vwd~~~~-------~~~~~~~-----~~~~~v~~~~~~~~~~~~~l~sg~~d~~v 725 (1249)
T 3sfz_A 661 LCCAFSSDDS---YIATCSADKKVKIWDSATG-------KLVHTYD-----EHSEQVNCCHFTNKSNHLLLATGSNDFFL 725 (1249)
T ss_dssp EEEEECTTSS---EEEEEETTSEEEEEETTTC-------CEEEEEE-----CCSSCEEEEEECSSSSCCEEEEEETTSCE
T ss_pred EEEEEecCCC---EEEEEeCCCeEEEEECCCC-------ceEEEEc-----CCCCcEEEEEEecCCCceEEEEEeCCCeE
Confidence 3444477653 4477778999999998531 1111111 23457889999998777788888887766
Q ss_pred EEecCC-CCcccceeeeccccCCCceeEeeEEecCCCceEEEeec-CceEEeecCC
Q psy11311 444 FSFTSG-MSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTA-LNIKIYQLRP 497 (499)
Q Consensus 444 lti~~~-G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~-~fVKIYDLs~ 497 (499)
...+-+ |+ ... .+. .....|..+.|-|..+ .|+..+. ..|+|||+..
T Consensus 726 ~vwd~~~~~-~~~----~~~-~h~~~v~~~~~sp~~~-~l~s~s~dg~v~vwd~~~ 774 (1249)
T 3sfz_A 726 KLWDLNQKE-CRN----TMF-GHTNSVNHCRFSPDDE-LLASCSADGTLRLWDVRS 774 (1249)
T ss_dssp EEEETTSSS-EEE----EEC-CCSSCEEEEEECSSTT-EEEEEESSSEEEEEEGGG
T ss_pred EEEECCCcc-hhh----eec-CCCCCEEEEEEecCCC-EEEEEECCCeEEEEeCCC
Confidence 666543 33 211 111 2356799999999876 4555554 5899999864
No 107
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=90.51 E-value=4.4 Score=36.87 Aligned_cols=113 Identities=12% Similarity=0.121 Sum_probs=61.9
Q ss_pred eeeccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCc-ceeeeeccceeE
Q psy11311 364 MCILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNE-ELLAVCGLKECI 442 (499)
Q Consensus 364 mc~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne-~~LAV~GlkeC~ 442 (499)
.|+--+|.+. ..| |.....+.|-|.++..--. ..++..- -.-.|..+.++|..+ .+||.++. |..
T Consensus 144 ~~v~~~p~~~-~~l-~sgs~D~~v~iwd~~~~~~-------~~~~~~~----~~~~v~~~~~~~~~~~~~l~s~s~-D~~ 209 (304)
T 2ynn_A 144 MCVAFNPKDP-STF-ASGCLDRTVKVWSLGQSTP-------NFTLTTG----QERGVNYVDYYPLPDKPYMITASD-DLT 209 (304)
T ss_dssp EEEEECTTCT-TEE-EEEETTSEEEEEETTCSSC-------SEEEECC----CTTCEEEEEECCSTTCCEEEEEET-TSE
T ss_pred EEEEECCCCC-CEE-EEEeCCCeEEEEECCCCCc-------cceeccC----CcCcEEEEEEEEcCCCCEEEEEcC-CCe
Confidence 3443466432 334 7777999999999853211 1111111 112355566777543 56665554 444
Q ss_pred EEEecCC-CCcccceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 443 VFSFTSG-MSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 443 Vlti~~~-G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
|...+-+ |+ ..-.+.- -...|..+.|-|..+ .|+-.. ...|||||+..
T Consensus 210 i~iWd~~~~~-----~~~~~~~-h~~~v~~~~~~p~~~-~l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 210 IKIWDYQTKS-----CVATLEG-HMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSST 259 (304)
T ss_dssp EEEEETTTTE-----EEEEEEC-CSSCEEEEEECSSSS-EEEEEETTSCEEEEETTT
T ss_pred EEEEeCCCCc-----cceeeCC-CCCCEEEEEECCCCC-EEEEEcCCCeEEEEECCC
Confidence 5444432 33 2111211 246788899999876 344443 46899999864
No 108
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=90.14 E-value=3.4 Score=40.21 Aligned_cols=103 Identities=19% Similarity=0.265 Sum_probs=63.9
Q ss_pred EEEEeec-CCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEecCCCCccc
Q psy11311 377 LVAVSHE-KGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSFTSGMSQAT 454 (499)
Q Consensus 377 LvAVshE-k~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti~~~G~~v~ 454 (499)
++|+..+ .+.|.++++..-- + .+.....-.-.|.+|+++|.. ++||+++.. ...|+.+.. |+
T Consensus 458 ~l~~~~~~d~~i~~~~~~~~~---------~--~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~i~iw~~~~-~~--- 521 (615)
T 1pgu_A 458 YVAVGLEEGNTIQVFKLSDLE---------V--SFDLKTPLRAKPSYISISPSE-TYIAAGDVMGKILLYDLQS-RE--- 521 (615)
T ss_dssp EEEEEETTTSCEEEEETTEEE---------E--EEECSSCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT-TE---
T ss_pred EEEEeecCCCeEEEEECCCcc---------c--cccccCCccCceEEEEECCCC-CEEEEcCCCCeEEEeeCCC-Cc---
Confidence 4467667 7888888875421 0 001112234578899999966 688877764 445555543 44
Q ss_pred ceeeeccccCCCceeEeeEEecC---------CCceEEEeec-CceEEeecCC
Q psy11311 455 DSITINPHCETSNYIIKALWIPG---------RQSTLAIVTA-LNIKIYQLRP 497 (499)
Q Consensus 455 d~l~i~l~l~~~~fIik~~Wipg---------sq~~LAVvT~-~fVKIYDLs~ 497 (499)
....+.-....-|..+.|-|. ....||..+. ..|+|||+..
T Consensus 522 --~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 572 (615)
T 1pgu_A 522 --VKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKR 572 (615)
T ss_dssp --EEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSC
T ss_pred --ceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCC
Confidence 222222213678999999992 2336777664 4899999975
No 109
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=89.99 E-value=1.5 Score=39.22 Aligned_cols=108 Identities=6% Similarity=0.038 Sum_probs=63.7
Q ss_pred eEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecCC-CCccc
Q psy11311 376 HLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTSG-MSQAT 454 (499)
Q Consensus 376 ~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~~-G~~v~ 454 (499)
.++++....+.|.++++..-- ..+.+++. . .+.+..++++|.. ++|+|++-.+-.|..++.. |+ +.
T Consensus 12 ~~~v~~~~~~~v~~~d~~~~~-----~~~~~~~~---~---~~~~~~~~~s~dg-~~~~v~~~~~~~i~~~d~~t~~-~~ 78 (349)
T 1jmx_B 12 EYMIVTNYPNNLHVVDVASDT-----VYKSCVMP---D---KFGPGTAMMAPDN-RTAYVLNNHYGDIYGIDLDTCK-NT 78 (349)
T ss_dssp EEEEEEETTTEEEEEETTTTE-----EEEEEECS---S---CCSSCEEEECTTS-SEEEEEETTTTEEEEEETTTTE-EE
T ss_pred EEEEEeCCCCeEEEEECCCCc-----EEEEEecC---C---CCCCceeEECCCC-CEEEEEeCCCCcEEEEeCCCCc-EE
Confidence 355666789999999985310 01111111 1 1135578888876 5777777666667777654 44 44
Q ss_pred ceeeeccc-cCCCceeEeeEEecCCCceEEEee-------------cCceEEeecCC
Q psy11311 455 DSITINPH-CETSNYIIKALWIPGRQSTLAIVT-------------ALNIKIYQLRP 497 (499)
Q Consensus 455 d~l~i~l~-l~~~~fIik~~Wipgsq~~LAVvT-------------~~fVKIYDLs~ 497 (499)
.++.+.-. -..+..+..+.|-|..+ +|++.. ...|.|||+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 134 (349)
T 1jmx_B 79 FHANLSSVPGEVGRSMYSFAISPDGK-EVYATVNPTQRLNDHYVVKPPRLEVFSTAD 134 (349)
T ss_dssp EEEESCCSTTEEEECSSCEEECTTSS-EEEEEEEEEEECSSCEEECCCEEEEEEGGG
T ss_pred EEEEcccccccccccccceEECCCCC-EEEEEcccccccccccccCCCeEEEEECCC
Confidence 33332110 00145577789998855 566666 37899999864
No 110
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=89.62 E-value=3.9 Score=39.35 Aligned_cols=115 Identities=9% Similarity=0.006 Sum_probs=63.4
Q ss_pred eEEEEeecCCeEEEeehhh--hccccccccccccc-----------ccccccccceeEEEeeecCCCcceeeeec--cce
Q psy11311 376 HLVAVSHEKGKITLLQLSG--LLKQIDSSKRKLTL-----------IKLASVSLPITILSVEANPCNEELLAVCG--LKE 440 (499)
Q Consensus 376 ~LvAVshEk~KVtllqls~--LLkqadss~~Kltl-----------~rLs~~~VpF~Vlsl~~NP~ne~~LAV~G--lke 440 (499)
.++|...+.+.|.|.++.. ++........-.++ ..-......+.|.+|+++|. .++|++++ -..
T Consensus 253 ~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~l~~~~~~d~~ 331 (450)
T 2vdu_B 253 YLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKN-LPFVAFFVEATKC 331 (450)
T ss_dssp TEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSS-SSEEEEEETTCSE
T ss_pred CEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCC-CCEEEEEECCCCe
Confidence 3447777899999999854 22211100000000 00011134577899999994 56777775 456
Q ss_pred eEEEEe-cCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEee---------cCceEEeecCCC
Q psy11311 441 CIVFSF-TSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT---------ALNIKIYQLRPE 498 (499)
Q Consensus 441 C~Vlti-~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT---------~~fVKIYDLs~d 498 (499)
..|+.+ +..+. .+..--.+.....|..+.|.|+ . +.|++ .++|+||.+..+
T Consensus 332 i~iw~~~~~~~~----~l~~~~~~~~~~~v~~~~~~~~--~-~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 332 IIILEMSEKQKG----DLALKQIITFPYNVISLSAHND--E-FQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp EEEEEECSSSTT----CEEEEEEEECSSCEEEEEEETT--E-EEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred EEEEEeccCCCC----ceeeccEeccCCceEEEEecCC--c-EEEEEecccCCCCCCcceEEEEEEcC
Confidence 777888 23332 1222222222367999999995 2 33333 446999987643
No 111
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=89.58 E-value=3.4 Score=38.83 Aligned_cols=104 Identities=12% Similarity=0.103 Sum_probs=63.7
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecC
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTS 448 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~ 448 (499)
+|.| +++|.+...+.|-|.++..-- .+..+......+.|.+++|+|.. .+||+. ..+..|...+-
T Consensus 249 ~p~~---~~l~s~s~D~~v~lwd~~~~~----------~~~~~~~~~~~~~~~~~~~s~~g-~~l~~g-~~d~~i~vwd~ 313 (354)
T 2pbi_B 249 YPSG---DAFASGSDDATCRLYDLRADR----------EVAIYSKESIIFGASSVDFSLSG-RLLFAG-YNDYTINVWDV 313 (354)
T ss_dssp CTTS---SEEEEEETTSCEEEEETTTTE----------EEEEECCTTCCSCEEEEEECTTS-SEEEEE-ETTSCEEEEET
T ss_pred eCCC---CEEEEEeCCCeEEEEECCCCc----------EEEEEcCCCcccceeEEEEeCCC-CEEEEE-ECCCcEEEEEC
Confidence 6655 344777899999999986421 11222333446778899999965 555554 45444444432
Q ss_pred -CCCcccceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEee
Q psy11311 449 -GMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQ 494 (499)
Q Consensus 449 -~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYD 494 (499)
+|+ . +. .+. .-...|..+.|-|..+ .||... ...|+|||
T Consensus 314 ~~~~-~---~~-~l~-~h~~~v~~l~~spdg~-~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 314 LKGS-R---VS-ILF-GHENRVSTLRVSPDGT-AFCSGSWDHTLRVWA 354 (354)
T ss_dssp TTCS-E---EE-EEC-CCSSCEEEEEECTTSS-CEEEEETTSEEEEEC
T ss_pred CCCc-e---EE-EEE-CCCCcEEEEEECCCCC-EEEEEcCCCCEEecC
Confidence 355 1 11 111 1257899999999876 455554 45799996
No 112
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=89.34 E-value=3.6 Score=36.60 Aligned_cols=105 Identities=14% Similarity=0.109 Sum_probs=59.3
Q ss_pred ceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecCCCCccc
Q psy11311 375 QHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTSGMSQAT 454 (499)
Q Consensus 375 q~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~~G~~v~ 454 (499)
..| |...+.+.|.+.++...-. .++.. ..-.-.|-.+++.|.....+++.|-.+..|...+.+..
T Consensus 141 ~~l-~s~s~d~~~~~~d~~~~~~--------~~~~~---~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~--- 205 (340)
T 4aow_A 141 RQI-VSGSRDKTIKLWNTLGVCK--------YTVQD---ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC--- 205 (340)
T ss_dssp SCE-EEEETTSCEEEECTTSCEE--------EEECS---SSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTT---
T ss_pred ccc-eeecCCCeEEEEEeCCCce--------EEEEe---ccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCC---
Confidence 335 6666888999887643221 11111 11123455566666666666666666655555554333
Q ss_pred ceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 455 DSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 455 d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
++.-.+. .-...|..+.|-|..+ .|+... ...|+|||+..
T Consensus 206 -~~~~~~~-~h~~~v~~~~~s~~~~-~l~s~s~Dg~i~iwd~~~ 246 (340)
T 4aow_A 206 -KLKTNHI-GHTGYLNTVTVSPDGS-LCASGGKDGQAMLWDLNE 246 (340)
T ss_dssp -EEEEEEC-CCSSCEEEEEECTTSS-EEEEEETTCEEEEEETTT
T ss_pred -ceeeEec-CCCCcEEEEEECCCCC-EEEEEeCCCeEEEEEecc
Confidence 1222221 1256788999988765 455444 35899999865
No 113
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=89.19 E-value=3.4 Score=39.68 Aligned_cols=109 Identities=13% Similarity=0.229 Sum_probs=65.1
Q ss_pred eccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEE
Q psy11311 366 ILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVF 444 (499)
Q Consensus 366 ~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vl 444 (499)
+.-+|.| ..| |.+.+.|.|.|.++..- +...+++. -.-.|..|+|+|.. ++||.+|.. .+.|.
T Consensus 114 ~~~~p~~--~~l-~s~s~Dg~i~vwd~~~~-------~~~~~l~~-----h~~~V~~v~~~~~~-~~l~sgs~D~~i~iw 177 (410)
T 1vyh_C 114 VIFHPVF--SVM-VSASEDATIKVWDYETG-------DFERTLKG-----HTDSVQDISFDHSG-KLLASCSADMTIKLW 177 (410)
T ss_dssp EEECSSS--SEE-EEEESSSCEEEEETTTC-------CCCEEECC-----CSSCEEEEEECTTS-SEEEEEETTSCCCEE
T ss_pred EEEcCCC--CEE-EEEeCCCeEEEEECCCC-------cEEEEEec-----cCCcEEEEEEcCCC-CEEEEEeCCCeEEEE
Confidence 3346655 344 66679999999997431 11112211 12258899999864 688877764 44555
Q ss_pred EecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecCceEEeecCC
Q psy11311 445 SFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLRP 497 (499)
Q Consensus 445 ti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~ 497 (499)
-+.. ++ ... .+. .....|..+.|.|..+.-+.-.....|+|||+..
T Consensus 178 d~~~-~~-~~~----~~~-~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~ 223 (410)
T 1vyh_C 178 DFQG-FE-CIR----TMH-GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQT 223 (410)
T ss_dssp ETTS-SC-EEE----CCC-CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred eCCC-Cc-eeE----EEc-CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 4433 33 111 111 1256899999999866433334457899999864
No 114
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=89.07 E-value=3.8 Score=37.89 Aligned_cols=107 Identities=19% Similarity=0.198 Sum_probs=59.3
Q ss_pred EEEEeecCCeEEEeehhhhccccccccccccc-ccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEecCCCCc-c
Q psy11311 377 LVAVSHEKGKITLLQLSGLLKQIDSSKRKLTL-IKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSFTSGMSQ-A 453 (499)
Q Consensus 377 LvAVshEk~KVtllqls~LLkqadss~~Kltl-~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti~~~G~~-v 453 (499)
++|.....++|-|.++..- +.++ ..+....-.-.|.+|+++|.. ++||.++.. ...|..+...... .
T Consensus 26 ~las~~~D~~i~lw~~~~~---------~~~~~~~~~~~~h~~~v~~v~~sp~~-~~las~s~D~~v~iw~~~~~~~~~~ 95 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYD---------DFTLIDVLDETAHKKAIRSVAWRPHT-SLLAAGSFDSTVSIWAKEESADRTF 95 (330)
T ss_dssp EEEEEESSSCEEEEECSSS---------CCEEEEEECTTCCCSCEEEEEECTTS-SEEEEEETTSCEEEEEC-------C
T ss_pred EEEEEcCCCEEEEEEecCC---------CeEEEEEEecCCccCCEEEEEECCCC-CEEEEEeCCCcEEEEEcccCcCccc
Confidence 5588788999999987420 0011 111111123368899999965 788877764 3445544321110 0
Q ss_pred cceeeeccccC-CCceeEeeEEecCCCceEEEee-cCceEEeecC
Q psy11311 454 TDSITINPHCE-TSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLR 496 (499)
Q Consensus 454 ~d~l~i~l~l~-~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs 496 (499)
.-+.. -.+. -...|..+.|-|..+ +||... ...|+|||+.
T Consensus 96 ~~~~~--~~~~~h~~~V~~v~~sp~g~-~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 96 EMDLL--AIIEGHENEVKGVAWSNDGY-YLATCSRDKSVWIWETD 137 (330)
T ss_dssp CCEEE--EEEC----CEEEEEECTTSC-EEEEEETTSCEEEEECC
T ss_pred cceeE--EEEcCCCCcEEEEEECCCCC-EEEEEeCCCEEEEEecc
Confidence 00111 1122 256799999999865 565554 5689999994
No 115
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=88.99 E-value=2.9 Score=39.73 Aligned_cols=105 Identities=12% Similarity=0.088 Sum_probs=62.0
Q ss_pred CcccccceEEEEe-e-cCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEe
Q psy11311 369 SPQSKRQHLVAVS-H-EKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSF 446 (499)
Q Consensus 369 sp~g~rq~LvAVs-h-Ek~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti 446 (499)
||.|+. | |++ . +.+.|-|.++...-. +.++. -.-+|.+|+|+|.. .+||.++-..-.++-.
T Consensus 142 SpDg~~--l-a~as~~~d~~i~iwd~~~~~~-------~~~~~------~~~~V~~v~fspdg-~~l~s~s~~~~~~~~~ 204 (365)
T 4h5i_A 142 SREGTV--A-AIASSKVPAIMRIIDPSDLTE-------KFEIE------TRGEVKDLHFSTDG-KVVAYITGSSLEVIST 204 (365)
T ss_dssp CTTSSC--E-EEEESCSSCEEEEEETTTTEE-------EEEEE------CSSCCCEEEECTTS-SEEEEECSSCEEEEET
T ss_pred cCCCCE--E-EEEECCCCCEEEEeECCCCcE-------EEEeC------CCCceEEEEEccCC-ceEEeccceeEEEEEe
Confidence 888753 3 543 2 456788988754221 12221 23358899999965 7888887555444443
Q ss_pred cCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecC-----ceEEeecC
Q psy11311 447 TSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTAL-----NIKIYQLR 496 (499)
Q Consensus 447 ~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~-----fVKIYDLs 496 (499)
.. |. .+........+..|..+.|.|..+ .|+....+ .|++||+.
T Consensus 205 ~~-~~----~~~~~~~~~~~~~v~~v~fspdg~-~l~~~s~d~~~~~~i~~~~~~ 253 (365)
T 4h5i_A 205 VT-GS----CIARKTDFDKNWSLSKINFIADDT-VLIAASLKKGKGIVLTKISIK 253 (365)
T ss_dssp TT-CC----EEEEECCCCTTEEEEEEEEEETTE-EEEEEEESSSCCEEEEEEEEE
T ss_pred cc-Cc----ceeeeecCCCCCCEEEEEEcCCCC-EEEEEecCCcceeEEeecccc
Confidence 33 44 122222223467899999999876 45444433 46777764
No 116
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=88.85 E-value=2.4 Score=37.39 Aligned_cols=73 Identities=27% Similarity=0.446 Sum_probs=46.5
Q ss_pred ccceeEEE------------eeecCCCcceeeeeccceeEEEEecC-CCCcccceeeeccccC-CCceeEeeEEecCCCc
Q psy11311 415 SLPITILS------------VEANPCNEELLAVCGLKECIVFSFTS-GMSQATDSITINPHCE-TSNYIIKALWIPGRQS 480 (499)
Q Consensus 415 ~VpF~Vls------------l~~NP~ne~~LAV~GlkeC~Vlti~~-~G~~v~d~l~i~l~l~-~~~fIik~~Wipgsq~ 480 (499)
..||.||. |+.+|-| +|||+ + |..|...+. .|+ +... +.+. .+..|..+.|-|..+
T Consensus 11 ~~p~rvldap~~~~d~y~~~l~WS~~~--~lAvg-~-D~tV~iWd~~tg~-~~~~----~~~~~~~~~V~~v~~~~~~~- 80 (318)
T 4ggc_A 11 SLPDRILDAPEIRNDYYLNLVDWSSGN--VLAVA-L-DNSVYLWSASSGD-ILQL----LQMEQPGEYISSVAWIKEGN- 80 (318)
T ss_dssp SSCSEEEECTTCCCCTTCBCEEECTTS--EEEEE-E-TTEEEEEETTTCC-EEEE----EECCSTTCCEEEEEECTTSS-
T ss_pred CCCCEEeeCCCCcccccceEEEECCCC--EEEEE-e-CCEEEEEECCCCC-EEEE----EEecCCCCeEEEEEECCCCC-
Confidence 45677764 5666644 88885 4 444555553 365 3222 2333 367899999999977
Q ss_pred eEEEee-cCceEEeecCC
Q psy11311 481 TLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 481 ~LAVvT-~~fVKIYDLs~ 497 (499)
.||... ...|+|||+..
T Consensus 81 ~l~sgs~Dg~v~iw~~~~ 98 (318)
T 4ggc_A 81 YLAVGTSSAEVQLWDVQQ 98 (318)
T ss_dssp EEEEEETTSEEEEEETTT
T ss_pred EEEEEECCCcEEEeecCC
Confidence 455544 45799999864
No 117
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=88.82 E-value=6.3 Score=36.82 Aligned_cols=105 Identities=10% Similarity=0.080 Sum_probs=64.7
Q ss_pred cCcccccceEEEEee--------cCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc
Q psy11311 368 SSPQSKRQHLVAVSH--------EKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK 439 (499)
Q Consensus 368 ~sp~g~rq~LvAVsh--------Ek~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk 439 (499)
.+|.|+ .| +++. +.|+|.++++..- +.+.....+-.+.+++++|.. ++|++++-.
T Consensus 261 ~~~~g~--~l-~~~~~~~~~~~~~dg~i~~~d~~~~-------------~~~~~~~~~~~~~~~~~~~~g-~~l~~~~~~ 323 (433)
T 3bws_A 261 LSKDGK--EL-YIAQFSASNQESGGGRLGIYSMDKE-------------KLIDTIGPPGNKRHIVSGNTE-NKIYVSDMC 323 (433)
T ss_dssp ECTTSS--EE-EEEEEESCTTCSCCEEEEEEETTTT-------------EEEEEEEEEECEEEEEECSST-TEEEEEETT
T ss_pred EcCCCC--EE-EEEECCCCccccCCCeEEEEECCCC-------------cEEeeccCCCCcceEEECCCC-CEEEEEecC
Confidence 366663 45 4444 3568889988531 111111233467789999865 567777666
Q ss_pred eeEEEEecCC-CCcccceeeeccccCCCceeEeeEEecCCCceEEEeecC----------------ceEEeecCC
Q psy11311 440 ECIVFSFTSG-MSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTAL----------------NIKIYQLRP 497 (499)
Q Consensus 440 eC~Vlti~~~-G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~----------------fVKIYDLs~ 497 (499)
+..|..++.+ |+ +...+ ..+..+..+.|-|..+ .|++.... .|.+||+..
T Consensus 324 ~~~v~v~d~~~~~-~~~~~------~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 324 CSKIEVYDLKEKK-VQKSI------PVFDKPNTIALSPDGK-YLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp TTEEEEEETTTTE-EEEEE------ECSSSEEEEEECTTSS-EEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT
T ss_pred CCEEEEEECCCCc-EEEEe------cCCCCCCeEEEcCCCC-EEEEEecCCCccccccccccccceEEEEEECCC
Confidence 6677666654 44 33222 2356688999999855 56666553 799999854
No 118
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=88.81 E-value=8.5 Score=32.85 Aligned_cols=108 Identities=8% Similarity=0.027 Sum_probs=64.8
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeecc--ceeEEEEe
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGL--KECIVFSF 446 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Gl--keC~Vlti 446 (499)
||.|+ .|+.++...+++.|..+..- + .. +.++ ...+..|.+++++|.. ++|++.+- ...+|+.+
T Consensus 137 spdg~--~l~~~~~~~~~~~l~~~~~~-~---~~-----~~~~--~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i~~~ 202 (297)
T 2ojh_A 137 SPDGK--SFTYCGIRDQVFDIYSMDID-S---GV-----ETRL--THGEGRNDGPDYSPDG-RWIYFNSSRTGQMQIWRV 202 (297)
T ss_dssp CTTSS--EEEEEEEETTEEEEEEEETT-T---CC-----EEEC--CCSSSCEEEEEECTTS-SEEEEEECTTSSCEEEEE
T ss_pred CCCCC--EEEEEECCCCceEEEEEECC-C---Cc-----ceEc--ccCCCccccceECCCC-CEEEEEecCCCCccEEEE
Confidence 67664 45335557787777765210 0 00 1111 1234567889999965 56666653 46788888
Q ss_pred cCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecC------------ceEEeecCC
Q psy11311 447 TSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTAL------------NIKIYQLRP 497 (499)
Q Consensus 447 ~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~------------fVKIYDLs~ 497 (499)
+..+. ....+ . .....+..+.|-|..+ +|++++.+ .|.+||+..
T Consensus 203 ~~~~~-~~~~~----~-~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~~~~~l~~~d~~~ 258 (297)
T 2ojh_A 203 RVDGS-SVERI----T-DSAYGDWFPHPSPSGD-KVVFVSYDADVFDHPRDLDVRVQLMDMDG 258 (297)
T ss_dssp ETTSS-CEEEC----C-CCSEEEEEEEECTTSS-EEEEEEEETTCCSCCSSEEEEEEEEETTS
T ss_pred CCCCC-CcEEE----e-cCCcccCCeEECCCCC-EEEEEEcCCCCCcccccCceEEEEEecCC
Confidence 85555 11111 1 1246788899999865 57777663 599999864
No 119
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=88.71 E-value=2.2 Score=46.69 Aligned_cols=121 Identities=10% Similarity=0.168 Sum_probs=70.6
Q ss_pred eeccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccc-----cccccceeEEEeeecCCCcceeeeeccc
Q psy11311 365 CILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKL-----ASVSLPITILSVEANPCNEELLAVCGLK 439 (499)
Q Consensus 365 c~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rL-----s~~~VpF~Vlsl~~NP~ne~~LAV~Glk 439 (499)
|+-.+|.| + ++|+..+.|.|-|.++..---. ...+..+ ....-.-.|.+|+++|.+...||+ |..
T Consensus 103 ~v~~sp~g--~-~l~sgs~dg~V~lwd~~~~~~~------~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~-g~~ 172 (902)
T 2oaj_A 103 SIDTDASL--D-WMLIGLQNGSMIVYDIDRDQLS------SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLI-SYE 172 (902)
T ss_dssp EEECCTTC--S-EEEEEETTSCEEEEETTTTEEE------EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEE-ECS
T ss_pred EEEECCCC--C-EEEEEcCCCcEEEEECCCCccc------cceeccccccccccccCCCCeEEEEEccCCCCEEEE-EeC
Confidence 34346765 3 4488889999999998542110 0111000 001122368899999987677775 566
Q ss_pred eeEEEEecCCCCcccceeeecccc-------------CCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 440 ECIVFSFTSGMSQATDSITINPHC-------------ETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 440 eC~Vlti~~~G~~v~d~l~i~l~l-------------~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
+..| ..+-+..+....+..+... .....|..+.|-|..+ .||... ...|+|||+..
T Consensus 173 dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~-~lasgs~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 173 YVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL-HIITIHEDNSLVFWDANS 242 (902)
T ss_dssp SCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS-EEEEEETTCCEEEEETTT
T ss_pred CCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCC-EEEEEECCCeEEEEECCC
Confidence 6666 5554433133333322100 0126799999999865 455544 45899999864
No 120
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=88.23 E-value=6.8 Score=37.30 Aligned_cols=105 Identities=11% Similarity=0.098 Sum_probs=65.4
Q ss_pred EEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeee-ccceeEEEEecCC-CCccc
Q psy11311 377 LVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVC-GLKECIVFSFTSG-MSQAT 454 (499)
Q Consensus 377 LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~-GlkeC~Vlti~~~-G~~v~ 454 (499)
++|.....+.|.|.++..--.. ...+. ......-.|..++++|...++||++ |-.|..|...+-. |. ..
T Consensus 244 ~l~s~~~D~~v~i~~~~~~~~~------~~~~~--~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~-~~ 314 (420)
T 4gga_A 244 HLASGGNDNLVNVWPSAPGEGG------WVPLQ--TFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA-CL 314 (420)
T ss_dssp EEEEEETTSCEEEEESSCCSSC------SCCSE--EECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTE-EE
T ss_pred eeeeeeccccceEEeecccccc------ceeee--eecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccc-cc
Confidence 3477678899999887432110 00011 1122334688999999999999986 4556555555432 33 22
Q ss_pred ceeeeccccCCCceeEeeEEecCCCceEEEee---cCceEEeecCC
Q psy11311 455 DSITINPHCETSNYIIKALWIPGRQSTLAIVT---ALNIKIYQLRP 497 (499)
Q Consensus 455 d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT---~~fVKIYDLs~ 497 (499)
. .+..+..+..+.|-|... +|++++ ...|+|||+..
T Consensus 315 ~------~~~~~~~v~~~~~~~~~~-~lv~~sg~~d~~I~iwd~~~ 353 (420)
T 4gga_A 315 S------AVDAHSQVCSILWSPHYK-ELISGHGFAQNQLVIWKYPT 353 (420)
T ss_dssp E------EEECSSCEEEEEEETTTT-EEEEEECTTTCCEEEEETTT
T ss_pred e------eeccccceeeeeecCCCC-eEEEEEecCCCEEEEEECCC
Confidence 1 122366788999999876 565554 46799999864
No 121
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=88.12 E-value=5.9 Score=37.74 Aligned_cols=107 Identities=4% Similarity=0.042 Sum_probs=64.0
Q ss_pred EEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEecCCCCcccc
Q psy11311 377 LVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSFTSGMSQATD 455 (499)
Q Consensus 377 LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti~~~G~~v~d 455 (499)
++++..+.|.|.|.++..- +...++.. ...-.-.|.+++++ +++||++|.. ...|+.+.. |+ ...
T Consensus 331 ~l~~~~~dg~i~vwd~~~~-------~~~~~~~~--~~~~~~~v~~~~~~---~~~l~s~~~dg~v~iwd~~~-~~-~~~ 396 (445)
T 2ovr_B 331 ILVSGNADSTVKIWDIKTG-------QCLQTLQG--PNKHQSAVTCLQFN---KNFVITSSDDGTVKLWDLKT-GE-FIR 396 (445)
T ss_dssp EEEEEETTSCEEEEETTTC-------CEEEEECS--TTSCSSCEEEEEEC---SSEEEEEETTSEEEEEETTT-CC-EEE
T ss_pred EEEEEeCCCeEEEEECCCC-------cEEEEEcc--CCCCCCCEEEEEEC---CCEEEEEeCCCeEEEEECCC-Cc-eee
Confidence 4477779999999998431 00011111 11134468888886 4677777754 344444443 66 433
Q ss_pred eeeeccccCCCceeEeeEEecCCCceEEEeecCc-----eEEeecCCC
Q psy11311 456 SITINPHCETSNYIIKALWIPGRQSTLAIVTALN-----IKIYQLRPE 498 (499)
Q Consensus 456 ~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~f-----VKIYDLs~d 498 (499)
.+........+..|..+.|-|... .||+...+- |.|||+..|
T Consensus 397 ~~~~~~~~~~~~~v~~~~~s~~~~-~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 397 NLVTLESGGSGGVVWRIRASNTKL-VCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEECTTGGGTCEEEEEEECSSEE-EEEEECSSSSSCCEEEEEECCCC
T ss_pred eeeccccCCCCceEEEEEecCCEE-EEEEcccCCCCccEEEEEECCCC
Confidence 332222223478899999998744 566655443 999999876
No 122
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=88.09 E-value=2.7 Score=45.57 Aligned_cols=115 Identities=9% Similarity=0.076 Sum_probs=66.9
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccc--cccccceeEEEeeecCCCcceeeeeccceeEEEEe
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKL--ASVSLPITILSVEANPCNEELLAVCGLKECIVFSF 446 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rL--s~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti 446 (499)
||.| +.| |++.+.|+|-|.++..-.-+ .+.=..+..+ ....-.=.|.+++++|.. ++|..+=+-.++..+
T Consensus 138 SPDG--~~L-Asgs~DGtVkIWd~~~~~l~---~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~ 209 (588)
T 2j04_A 138 NPIE--SSI-VVGNEDGELQFFSIRKNSEN---TPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTV 209 (588)
T ss_dssp CSSS--SCE-EEEETTSEEEEEECCCCTTT---CCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECC
T ss_pred cCCC--CEE-EEEcCCCEEEEEECCCCccc---cccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEEC
Confidence 8876 345 88899999999998641000 0000011111 011112379999999976 444444345666666
Q ss_pred cCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecCceEEeecCC
Q psy11311 447 TSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLRP 497 (499)
Q Consensus 447 ~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~ 497 (499)
..+.. .+-...+ .-.....|..+.|. | ..||++-..-||+||+..
T Consensus 210 ~~~~~-~~~~~tL--~~~h~~~V~svaFs-g--~~LASa~~~tIkLWd~~~ 254 (588)
T 2j04_A 210 SASSH-QPVSRMI--QNASRRKITDLKIV-D--YKVVLTCPGYVHKIDLKN 254 (588)
T ss_dssp CSSSS-CCCEEEE--ECCCSSCCCCEEEE-T--TEEEEECSSEEEEEETTT
T ss_pred CCCcc-ccceeee--cccccCcEEEEEEE-C--CEEEEEeCCeEEEEECCC
Confidence 55332 1000112 11124689999999 5 589988889999999863
No 123
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=87.72 E-value=5.6 Score=43.33 Aligned_cols=110 Identities=11% Similarity=0.134 Sum_probs=67.6
Q ss_pred eeccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEE
Q psy11311 365 CILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIV 443 (499)
Q Consensus 365 c~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~V 443 (499)
|+--||.|+ ++|+....|.|.|.++..-- ...+++ .-.-.|.+++++|.+ ++||++|.. ...|
T Consensus 620 ~~~~s~~~~---~l~s~~~d~~i~vw~~~~~~-------~~~~~~-----~h~~~v~~~~~s~~~-~~l~s~~~d~~v~v 683 (1249)
T 3sfz_A 620 HACFSQDGQ---RIASCGADKTLQVFKAETGE-------KLLDIK-----AHEDEVLCCAFSSDD-SYIATCSADKKVKI 683 (1249)
T ss_dssp EEEECTTSS---EEEEEETTSCEEEEETTTCC-------EEEEEC-----CCSSCEEEEEECTTS-SEEEEEETTSEEEE
T ss_pred EEEECCCCC---EEEEEeCCCeEEEEECCCCC-------EEEEec-----cCCCCEEEEEEecCC-CEEEEEeCCCeEEE
Confidence 333466553 44777899999999985321 111222 224578999999965 788888764 4445
Q ss_pred EEecCCCCcccceeeeccccCCCceeEeeEEecCCCce-EEEeec-CceEEeecCC
Q psy11311 444 FSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQST-LAIVTA-LNIKIYQLRP 497 (499)
Q Consensus 444 lti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~-LAVvT~-~fVKIYDLs~ 497 (499)
..+.. |. ..-.+ . ..+..|..+.|.|..... |+.... ..|+|||+..
T Consensus 684 wd~~~-~~-~~~~~----~-~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~ 732 (1249)
T 3sfz_A 684 WDSAT-GK-LVHTY----D-EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ 732 (1249)
T ss_dssp EETTT-CC-EEEEE----E-CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS
T ss_pred EECCC-Cc-eEEEE----c-CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC
Confidence 54443 44 22222 2 136678999999975543 333333 4799999865
No 124
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=87.53 E-value=3.1 Score=43.96 Aligned_cols=113 Identities=15% Similarity=0.238 Sum_probs=67.0
Q ss_pred cCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCC-cceeeeeccc-eeEEEE
Q psy11311 368 SSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCN-EELLAVCGLK-ECIVFS 445 (499)
Q Consensus 368 ~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~n-e~~LAV~Glk-eC~Vlt 445 (499)
-+|.|+ .| |++...|.|.|.++..- ..+ .+..+. .-.-.|.+|+++|.. .++||.+|.. ...|..
T Consensus 17 ~s~dg~--~l-atg~~dg~I~vwd~~~~-----~~~---~~~~l~--~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd 83 (753)
T 3jro_A 17 LDYYGK--RL-ATCSSDKTIKIFEVEGE-----THK---LIDTLT--GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 83 (753)
T ss_dssp CCSSSC--CE-EEEETTTEEEEEEEETT-----EEE---EEEEEC--CCSSCEEEEEECCTTSCSEEEEEETTSCEEEEE
T ss_pred ECCCCC--eE-EEEECCCcEEEEecCCC-----CCc---cceecc--CCcCceEEEEecCCCCCCEEEEEeCCCeEEEEE
Confidence 366653 35 77779999999997521 000 011111 124568999998763 5778777764 355555
Q ss_pred ecCCCCcccceeeeccccCCCceeEeeEEecCC-CceEEEeec-CceEEeecCCC
Q psy11311 446 FTSGMSQATDSITINPHCETSNYIIKALWIPGR-QSTLAIVTA-LNIKIYQLRPE 498 (499)
Q Consensus 446 i~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgs-q~~LAVvT~-~fVKIYDLs~d 498 (499)
+.. |. . ..+.........|..+.|-|.. ...|+..+. ..|+|||+...
T Consensus 84 ~~~-~~-~---~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 84 EEN-GR-W---SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp EET-TE-E---EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred CCC-Cc-c---cccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 544 22 1 1111111236789999999973 234555554 58999998653
No 125
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=87.48 E-value=8.2 Score=39.26 Aligned_cols=111 Identities=15% Similarity=0.211 Sum_probs=66.3
Q ss_pred eccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccc-cccccccceeEEEeeecCCCcceeeeeccc-eeEE
Q psy11311 366 ILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLI-KLASVSLPITILSVEANPCNEELLAVCGLK-ECIV 443 (499)
Q Consensus 366 ~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~-rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~V 443 (499)
+--||.|+ .| |.+...++|.|.++..-.+ +-.+ .+. .=.-.|.+|+|+|.. ++||.+|.. ...|
T Consensus 497 v~fspdg~--~l-as~s~d~~v~~w~~~~~~~--------~~~~~~~~--~H~~~V~~v~fspdg-~~lasgs~D~~v~l 562 (611)
T 1nr0_A 497 VAFSNNGA--FL-VATDQSRKVIPYSVANNFE--------LAHTNSWT--FHTAKVACVSWSPDN-VRLATGSLDNSVIV 562 (611)
T ss_dssp EEECTTSS--EE-EEEETTSCEEEEEGGGTTE--------ESCCCCCC--CCSSCEEEEEECTTS-SEEEEEETTSCEEE
T ss_pred EEECCCCC--EE-EEEcCCCCEEEEEcCCCCc--------eeeeeeee--ecccceeEEEECCCC-CEEEEEECCCcEEE
Confidence 33477763 34 7777899999999853110 0000 011 123469999999965 788887765 3455
Q ss_pred EEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEe-ecCceEEeecC
Q psy11311 444 FSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIV-TALNIKIYQLR 496 (499)
Q Consensus 444 lti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVv-T~~fVKIYDLs 496 (499)
..++..+. .+...+.--....|..+.|.|..+ |+.. ....|||||+.
T Consensus 563 W~~~~~~~----~~~~~~~~h~~~~v~~v~fs~d~~--l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 563 WNMNKPSD----HPIIIKGAHAMSSVNSVIWLNETT--IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp EETTCTTS----CCEEETTSSTTSCEEEEEEEETTE--EEEEETTSCEEEEECC
T ss_pred EECCCccc----ccchhhccCcccCeeEEEEcCCCE--EEEecCCCCEEEEecc
Confidence 55554332 110111111146799999999876 4443 45689999983
No 126
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=87.02 E-value=4.1 Score=36.55 Aligned_cols=75 Identities=8% Similarity=-0.060 Sum_probs=49.3
Q ss_pred EEEeeecCCCcceeeeeccceeEEEEecCC-CCcccceeeeccccC----CCceeEeeEEecCCCceEEEee---cCceE
Q psy11311 420 ILSVEANPCNEELLAVCGLKECIVFSFTSG-MSQATDSITINPHCE----TSNYIIKALWIPGRQSTLAIVT---ALNIK 491 (499)
Q Consensus 420 Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~~-G~~v~d~l~i~l~l~----~~~fIik~~Wipgsq~~LAVvT---~~fVK 491 (499)
+..++++|.. ++|+|++..+..|..++.. |+ +...+.++-... .-..+..+.|-|..+ .|++.. +..|.
T Consensus 91 ~~~~~~s~dg-~~l~v~~~~~~~v~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~i~ 167 (353)
T 3vgz_A 91 PFGATINNTT-QTLWFGNTVNSAVTAIDAKTGE-VKGRLVLDDRKRTEEVRPLQPRELVADDATN-TVYISGIGKESVIW 167 (353)
T ss_dssp CCSEEEETTT-TEEEEEETTTTEEEEEETTTCC-EEEEEESCCCCCCSSCCCCEEEEEEEETTTT-EEEEEEESSSCEEE
T ss_pred cceEEECCCC-CEEEEEecCCCEEEEEeCCCCe-eEEEEecCCCccccccCCCCCceEEECCCCC-EEEEEecCCCceEE
Confidence 4567788865 5788888877788888764 55 656555532211 112477888988755 466665 45699
Q ss_pred EeecCC
Q psy11311 492 IYQLRP 497 (499)
Q Consensus 492 IYDLs~ 497 (499)
+||+..
T Consensus 168 ~~d~~~ 173 (353)
T 3vgz_A 168 VVDGGN 173 (353)
T ss_dssp EEETTT
T ss_pred EEcCCC
Confidence 999864
No 127
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=86.68 E-value=5.2 Score=40.89 Aligned_cols=102 Identities=11% Similarity=0.081 Sum_probs=60.3
Q ss_pred EEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCC-cceeeeeccceeEEEEecCC-CCccc
Q psy11311 377 LVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCN-EELLAVCGLKECIVFSFTSG-MSQAT 454 (499)
Q Consensus 377 LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~n-e~~LAV~GlkeC~Vlti~~~-G~~v~ 454 (499)
+++++...|.|.|.++..- ....++. ..-+-.|..++++|.. ..+|++++ .+..|..++-. |+ ..
T Consensus 155 ~l~~~~~dg~v~vwd~~~~-------~~~~~~~----~~~~~~v~~~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~-~~ 221 (814)
T 3mkq_A 155 TFASGCLDRTVKVWSLGQS-------TPNFTLT----TGQERGVNYVDYYPLPDKPYMITAS-DDLTIKIWDYQTKS-CV 221 (814)
T ss_dssp EEEEEETTSEEEEEETTCS-------SCSEEEE----CCCTTCCCEEEECCSTTCCEEEEEC-TTSEEEEEETTTTE-EE
T ss_pred EEEEEeCCCeEEEEECCCC-------cceeEEe----cCCCCCEEEEEEEECCCCCEEEEEe-CCCEEEEEECCCCc-EE
Confidence 4577789999999998431 1111111 1112345667788753 34555544 55556555532 33 22
Q ss_pred ceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 455 DSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 455 d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
.. +.- ...-|..+.|-|..+ .|++.+ ...|+|||+..
T Consensus 222 ~~----~~~-~~~~v~~~~~~~~~~-~l~~~~~dg~v~vwd~~~ 259 (814)
T 3mkq_A 222 AT----LEG-HMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSST 259 (814)
T ss_dssp EE----EEC-CSSCEEEEEECSSSS-EEEEEETTSCEEEEETTT
T ss_pred EE----EcC-CCCCEEEEEEcCCCC-EEEEEeCCCeEEEEECCC
Confidence 22 211 256789999999877 566665 46799999875
No 128
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=85.93 E-value=5.2 Score=36.89 Aligned_cols=72 Identities=13% Similarity=0.100 Sum_probs=45.9
Q ss_pred eEEEeeecCC-Ccceeeeeccc-eeEEEEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEE-eecCceEEeec
Q psy11311 419 TILSVEANPC-NEELLAVCGLK-ECIVFSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAI-VTALNIKIYQL 495 (499)
Q Consensus 419 ~Vlsl~~NP~-ne~~LAV~Glk-eC~Vlti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAV-vT~~fVKIYDL 495 (499)
.|.+|+++|. +.++||.+|.. ...|..+.. |. . +.+. ....+..|..+.|-|..+ .||. .....|+|||+
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~-~~-~---~~~~-~~~~~~~i~~~~~~pdg~-~lasg~~dg~i~iwd~ 199 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRGTIGFQSYED-DS-Q---YIVH-SAKSDVEYSSGVLHKDSL-LLALYSPDGILDVYNL 199 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTCCEEEEESSS-SC-E---EEEE-CCCSSCCCCEEEECTTSC-EEEEECTTSCEEEEES
T ss_pred CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCC-Cc-E---EEEE-ecCCCCceEEEEECCCCC-EEEEEcCCCEEEEEEC
Confidence 5999999993 45677777754 455555543 44 2 1111 112244589999999765 5665 45789999999
Q ss_pred CC
Q psy11311 496 RP 497 (499)
Q Consensus 496 s~ 497 (499)
..
T Consensus 200 ~~ 201 (343)
T 3lrv_A 200 SS 201 (343)
T ss_dssp SC
T ss_pred CC
Confidence 75
No 129
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=85.85 E-value=3.8 Score=39.12 Aligned_cols=75 Identities=12% Similarity=0.079 Sum_probs=39.1
Q ss_pred EEEeeecCCCcceeeeeccc-eeEEEEecCCCCcccceeeeccccC-CCceeEeeEEecCC-------CceEEEe-ecCc
Q psy11311 420 ILSVEANPCNEELLAVCGLK-ECIVFSFTSGMSQATDSITINPHCE-TSNYIIKALWIPGR-------QSTLAIV-TALN 489 (499)
Q Consensus 420 Vlsl~~NP~ne~~LAV~Glk-eC~Vlti~~~G~~v~d~l~i~l~l~-~~~fIik~~Wipgs-------q~~LAVv-T~~f 489 (499)
..++.++|.+..+||.++.. ...|..... |+ ......+. .+. -..+|..+.|-|.. ...||-. -...
T Consensus 91 ~~~~~~~~~~~~~las~~~d~~v~lw~~~~-~~-~~~~~~~~-~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~t 167 (393)
T 4gq1_A 91 DGNVNSSPVYSLFLACVCQDNTVRLIITKN-ET-IITQHVLG-GKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCT 167 (393)
T ss_dssp ------CCEEEEEEEEEETTSCEEEEEEET-TE-EEEEEEEC-TTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSE
T ss_pred CcceeecCCCCCEEEEEeCCCcEEEEECCC-Cc-cceeeeec-ccCCCCCceEEEEEccccccccCCCCCEEEEEECCCe
Confidence 34455666677777777654 344555444 33 21111221 222 25899999999832 1234433 2457
Q ss_pred eEEeecCC
Q psy11311 490 IKIYQLRP 497 (499)
Q Consensus 490 VKIYDLs~ 497 (499)
|||||+..
T Consensus 168 v~~Wd~~~ 175 (393)
T 4gq1_A 168 LIIWRLTD 175 (393)
T ss_dssp EEEEEEET
T ss_pred EEEEECCC
Confidence 99999864
No 130
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=84.91 E-value=3.7 Score=37.76 Aligned_cols=78 Identities=9% Similarity=0.053 Sum_probs=48.1
Q ss_pred eeEEEeeecCCCcceeeeeccc-eeEEEEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecCceEEeecC
Q psy11311 418 ITILSVEANPCNEELLAVCGLK-ECIVFSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLR 496 (499)
Q Consensus 418 F~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs 496 (499)
-.|.+|+++|...++||.+|.. ...|..+..... ......-.+. .-...|..+.|-|..+..+.--....|||||+.
T Consensus 18 ~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~-~~~~~~~~~~-~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~ 95 (319)
T 3frx_A 18 GWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQ-KFGVPVRSFK-GHSHIVQDCTLTADGAYALSASWDKTLRLWDVA 95 (319)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETT-EEEEEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ceEEEEEccCCCccEEEEecCCccEEEecCCCCCc-cccccceEEe-CCcccEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 3588999999888888888865 344555544332 1111111111 125778899999986633333345789999986
Q ss_pred C
Q psy11311 497 P 497 (499)
Q Consensus 497 ~ 497 (499)
.
T Consensus 96 ~ 96 (319)
T 3frx_A 96 T 96 (319)
T ss_dssp T
T ss_pred C
Confidence 4
No 131
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=84.69 E-value=8.9 Score=34.19 Aligned_cols=73 Identities=14% Similarity=0.226 Sum_probs=40.1
Q ss_pred cCcccccceEEEEeecC------------CeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeee
Q psy11311 368 SSPQSKRQHLVAVSHEK------------GKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAV 435 (499)
Q Consensus 368 ~sp~g~rq~LvAVshEk------------~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV 435 (499)
.||.|+ .| +++.+. +.|.++++..--. .+.+.....|..|.+|+++|... |.|
T Consensus 99 ~spdg~--~l-~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~----------~~~~~~~~~~~~~~~~~~s~dg~--l~~ 163 (349)
T 1jmx_B 99 ISPDGK--EV-YATVNPTQRLNDHYVVKPPRLEVFSTADGLE----------AKPVRTFPMPRQVYLMRAADDGS--LYV 163 (349)
T ss_dssp ECTTSS--EE-EEEEEEEEECSSCEEECCCEEEEEEGGGGGG----------BCCSEEEECCSSCCCEEECTTSC--EEE
T ss_pred ECCCCC--EE-EEEcccccccccccccCCCeEEEEECCCccc----------cceeeeccCCCcccceeECCCCc--EEE
Confidence 367664 35 666544 8999999864210 01111112233567788999875 555
Q ss_pred eccceeEEEEecC-CCCcccceeee
Q psy11311 436 CGLKECIVFSFTS-GMSQATDSITI 459 (499)
Q Consensus 436 ~GlkeC~Vlti~~-~G~~v~d~l~i 459 (499)
.|-. |..++. .|+ +...+.+
T Consensus 164 ~~~~---i~~~d~~~~~-~~~~~~~ 184 (349)
T 1jmx_B 164 AGPD---IYKMDVKTGK-YTVALPL 184 (349)
T ss_dssp ESSS---EEEECTTTCC-EEEEECS
T ss_pred ccCc---EEEEeCCCCc-eeccccc
Confidence 5543 555654 355 5544443
No 132
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=84.12 E-value=9.3 Score=36.64 Aligned_cols=103 Identities=10% Similarity=0.144 Sum_probs=59.8
Q ss_pred eEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCC-------------------cceeeee
Q psy11311 376 HLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCN-------------------EELLAVC 436 (499)
Q Consensus 376 ~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~n-------------------e~~LAV~ 436 (499)
.++|.+...+.|.|.++..- ..+.++. .-+..|.+++++|.. ..+||.+
T Consensus 247 ~~l~s~s~D~~v~vwd~~~~-------~~~~~~~-----~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg 314 (410)
T 1vyh_C 247 TLIASCSNDQTVRVWVVATK-------ECKAELR-----EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314 (410)
T ss_dssp SEEEEEETTSCEEEEETTTC-------CEEEEEC-----CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCC-------ceeeEec-----CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEE
Confidence 35577789999999988431 1111221 123457788888853 3355554
Q ss_pred ccceeEEEEecC-CCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecCceEEeecCC
Q psy11311 437 GLKECIVFSFTS-GMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLRP 497 (499)
Q Consensus 437 GlkeC~Vlti~~-~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~ 497 (499)
+ .|..|...+- .|. .. ..+. .-...|..+.|-|+.+.-++.-....|+|||+..
T Consensus 315 s-~D~~i~iwd~~~~~-~~----~~~~-~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~ 369 (410)
T 1vyh_C 315 S-RDKTIKMWDVSTGM-CL----MTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369 (410)
T ss_dssp E-TTSEEEEEETTTTE-EE----EEEE-CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTT
T ss_pred e-CCCeEEEEECCCCc-eE----EEEE-CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 4 4444444442 243 21 1111 1257899999999876433333445799999864
No 133
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=83.16 E-value=4.7 Score=41.45 Aligned_cols=78 Identities=9% Similarity=0.106 Sum_probs=52.1
Q ss_pred ceeEEEeeecCCCcceeeeeccc-eeEEEEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEee
Q psy11311 417 PITILSVEANPCNEELLAVCGLK-ECIVFSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQ 494 (499)
Q Consensus 417 pF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYD 494 (499)
.-.|.+|+++|.+.++||.+|.. ...|..+...+. ......-.+.- -...|..+.|-|..+ .|+... ...|+|||
T Consensus 382 ~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~-~~~~~~~~~~~-h~~~v~~v~~s~~g~-~l~sgs~Dg~v~vwd 458 (694)
T 3dm0_A 382 TDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDK-AYGVAQRRLTG-HSHFVEDVVLSSDGQ-FALSGSWDGELRLWD 458 (694)
T ss_dssp SSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTT-CSCEEEEEEEC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEE
T ss_pred CceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCc-ccccccceecC-CCCcEEEEEECCCCC-EEEEEeCCCcEEEEE
Confidence 34588899999988999888875 566666666444 22221111211 257899999999866 444443 56899999
Q ss_pred cCC
Q psy11311 495 LRP 497 (499)
Q Consensus 495 Ls~ 497 (499)
+..
T Consensus 459 ~~~ 461 (694)
T 3dm0_A 459 LAA 461 (694)
T ss_dssp TTT
T ss_pred CCC
Confidence 864
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=83.05 E-value=13 Score=38.00 Aligned_cols=71 Identities=11% Similarity=0.099 Sum_probs=48.9
Q ss_pred eeEEEeeecCCCcceeeeeccceeEEEEecCCC--CcccceeeeccccCCCceeEeeEEecCCCceEEEeecCceEEeec
Q psy11311 418 ITILSVEANPCNEELLAVCGLKECIVFSFTSGM--SQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQL 495 (499)
Q Consensus 418 F~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~~G--~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDL 495 (499)
-.|.+++++|-. ++||+++-....++.+...+ + +. . +. ..+..+..+.|-|..+ .||.+.++.|.|||+
T Consensus 109 ~~v~~~~~SpDg-~~l~~~~~~~i~~~d~~~~~~~~-~~---~--l~-~~~~~~~~~~~SPDG~-~la~~~~~~i~~~d~ 179 (741)
T 2ecf_A 109 TGIVDYQWSPDA-QRLLFPLGGELYLYDLKQEGKAA-VR---Q--LT-HGEGFATDAKLSPKGG-FVSFIRGRNLWVIDL 179 (741)
T ss_dssp EESCCCEECTTS-SEEEEEETTEEEEEESSSCSTTS-CC---B--CC-CSSSCEEEEEECTTSS-EEEEEETTEEEEEET
T ss_pred cCcceeEECCCC-CEEEEEeCCcEEEEECCCCCcce-EE---E--cc-cCCcccccccCCCCCC-EEEEEeCCcEEEEec
Confidence 346788999966 67777776555555554421 3 21 1 11 1246688999999977 799999999999998
Q ss_pred CC
Q psy11311 496 RP 497 (499)
Q Consensus 496 s~ 497 (499)
..
T Consensus 180 ~~ 181 (741)
T 2ecf_A 180 AS 181 (741)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 135
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=82.69 E-value=20 Score=33.49 Aligned_cols=74 Identities=11% Similarity=-0.020 Sum_probs=47.7
Q ss_pred eeEEEeeecCCCcceeeeecc--ceeEEEEecCCCCcccceeeeccccCC-CceeEeeEEecCCCceEEEee--cCceEE
Q psy11311 418 ITILSVEANPCNEELLAVCGL--KECIVFSFTSGMSQATDSITINPHCET-SNYIIKALWIPGRQSTLAIVT--ALNIKI 492 (499)
Q Consensus 418 F~Vlsl~~NP~ne~~LAV~Gl--keC~Vlti~~~G~~v~d~l~i~l~l~~-~~fIik~~Wipgsq~~LAVvT--~~fVKI 492 (499)
-.+..++++|.. ++|+|+.. ....++.+...|+ +...- .+.+.. +...+.+.|=|..+ .|+++. +..|.+
T Consensus 145 ~~~~~~~~spdG-~~l~~~~~~~~~v~~~~~~~~g~-~~~~~--~~~~~~~g~~p~~~~~spdg~-~l~v~~~~~~~v~v 219 (365)
T 1jof_A 145 TGIHGMVFDPTE-TYLYSADLTANKLWTHRKLASGE-VELVG--SVDAPDPGDHPRWVAMHPTGN-YLYALMEAGNRICE 219 (365)
T ss_dssp CCEEEEEECTTS-SEEEEEETTTTEEEEEEECTTSC-EEEEE--EEECSSTTCCEEEEEECTTSS-EEEEEETTTTEEEE
T ss_pred CcceEEEECCCC-CEEEEEcCCCCEEEEEEECCCCC-EEEee--eEecCCCCCCCCEeEECCCCC-EEEEEECCCCeEEE
Confidence 347789999976 67888855 4566666654566 32111 223332 67788899998855 455554 357999
Q ss_pred eecC
Q psy11311 493 YQLR 496 (499)
Q Consensus 493 YDLs 496 (499)
|++.
T Consensus 220 ~~~~ 223 (365)
T 1jof_A 220 YVID 223 (365)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9865
No 136
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=81.79 E-value=12 Score=41.09 Aligned_cols=103 Identities=14% Similarity=0.091 Sum_probs=63.9
Q ss_pred cCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEe
Q psy11311 368 SSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSF 446 (499)
Q Consensus 368 ~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti 446 (499)
-+|.| +++|+....|.|-|.+...... ..+ +. -.-.|.+|+|+| + ++||.++-. ...|.-+
T Consensus 25 fspdg---~~lAsgs~Dg~I~lw~~~~~~~-------~~~---~~---~~~~V~~l~fsp-g-~~L~S~s~D~~v~lWd~ 86 (902)
T 2oaj_A 25 FDFTQ---NLLAIATVTGEVHIYGQQQVEV-------VIK---LE---DRSAIKEMRFVK-G-IYLVVINAKDTVYVLSL 86 (902)
T ss_dssp EETTT---TEEEEEETTSEEEEECSTTCEE-------EEE---CS---SCCCEEEEEEET-T-TEEEEEETTCEEEEEET
T ss_pred ECCCC---CEEEEEeCCCEEEEEeCCCcEE-------EEE---cC---CCCCEEEEEEcC-C-CEEEEEECcCeEEEEEC
Confidence 36765 3569988999999998643210 111 11 134699999999 4 477776643 3334443
Q ss_pred cCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEe-ecCceEEeecCC
Q psy11311 447 TSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIV-TALNIKIYQLRP 497 (499)
Q Consensus 447 ~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVv-T~~fVKIYDLs~ 497 (499)
.. |+ ....+ . ....|..+.|-|..+ .||+. .+..|+|||+..
T Consensus 87 ~~-~~-~~~~~----~--~~~~V~~v~~sp~g~-~l~sgs~dg~V~lwd~~~ 129 (902)
T 2oaj_A 87 YS-QK-VLTTV----F--VPGKITSIDTDASLD-WMLIGLQNGSMIVYDIDR 129 (902)
T ss_dssp TT-CS-EEEEE----E--CSSCEEEEECCTTCS-EEEEEETTSCEEEEETTT
T ss_pred CC-Cc-EEEEE----c--CCCCEEEEEECCCCC-EEEEEcCCCcEEEEECCC
Confidence 33 44 22222 1 235689999999876 45554 466899999864
No 137
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=81.62 E-value=7.2 Score=34.45 Aligned_cols=111 Identities=10% Similarity=0.143 Sum_probs=59.3
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeec---------c-
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCG---------L- 438 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~G---------l- 438 (499)
||.|+ +|++.....+.|.++++...- ..+++.+.. .....-.+..++++|.. ++|+|++ +
T Consensus 42 s~dg~--~l~v~~~~~~~v~~~d~~~~~-----~~~~~~~~~--~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~ 111 (337)
T 1pby_B 42 APGGR--IAYATVNKSESLVKIDLVTGE-----TLGRIDLST--PEERVKSLFGAALSPDG-KTLAIYESPVRLELTHFE 111 (337)
T ss_dssp CTTSS--EEEEEETTTTEEEEEETTTCC-----EEEEEECCB--TTEEEECTTCEEECTTS-SEEEEEEEEEEECSSCEE
T ss_pred cCCCC--EEEEEeCCCCeEEEEECCCCC-----eEeeEEcCC--cccccccccceEECCCC-CEEEEEeccccccccccc
Confidence 66663 453444456789999874310 011122111 00001133467888865 5777774 2
Q ss_pred -ceeEEEEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecCceEEeecCC
Q psy11311 439 -KECIVFSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLRP 497 (499)
Q Consensus 439 -keC~Vlti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~ 497 (499)
.+-.|..++..+.++...+. .+..+..+.|-|... .|++. +..|.+||+..
T Consensus 112 ~~~~~i~v~d~~~~~~~~~~~------~~~~~~~~~~s~dg~-~l~~~-~~~i~~~d~~~ 163 (337)
T 1pby_B 112 VQPTRVALYDAETLSRRKAFE------APRQITMLAWARDGS-KLYGL-GRDLHVMDPEA 163 (337)
T ss_dssp ECCCEEEEEETTTTEEEEEEE------CCSSCCCEEECTTSS-CEEEE-SSSEEEEETTT
T ss_pred ccCceEEEEECCCCcEEEEEe------CCCCcceeEECCCCC-EEEEe-CCeEEEEECCC
Confidence 24555555543321332222 244566788988855 35544 88999999864
No 138
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=81.17 E-value=12 Score=38.42 Aligned_cols=99 Identities=8% Similarity=-0.018 Sum_probs=61.2
Q ss_pred eEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecC---CCCc
Q psy11311 376 HLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTS---GMSQ 452 (499)
Q Consensus 376 ~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~---~G~~ 452 (499)
+++++....+.|.|++.... +.+....+++.+-.++++|.. ++|+|++.. -.|..++- .|+
T Consensus 150 ~~~vs~~~d~~V~v~D~~t~-------------~~~~~i~~g~~~~~v~~spdg-~~l~v~~~d-~~V~v~D~~~~t~~- 213 (543)
T 1nir_A 150 LFSVTLRDAGQIALVDGDSK-------------KIVKVIDTGYAVHISRMSASG-RYLLVIGRD-ARIDMIDLWAKEPT- 213 (543)
T ss_dssp EEEEEEGGGTEEEEEETTTC-------------CEEEEEECSTTEEEEEECTTS-CEEEEEETT-SEEEEEETTSSSCE-
T ss_pred EEEEEEcCCCeEEEEECCCc-------------eEEEEEecCcccceEEECCCC-CEEEEECCC-CeEEEEECcCCCCc-
Confidence 45455556778999976321 122223344456788899955 899999876 55666654 454
Q ss_pred ccceeeeccccCCCceeEeeEEec----CCCceEEEee--cCceEEeecCC
Q psy11311 453 ATDSITINPHCETSNYIIKALWIP----GRQSTLAIVT--ALNIKIYQLRP 497 (499)
Q Consensus 453 v~d~l~i~l~l~~~~fIik~~Wip----gsq~~LAVvT--~~fVKIYDLs~ 497 (499)
+..++ ..|...+-+.+=| ..+ .|++.. ...|+|||...
T Consensus 214 ~~~~i------~~g~~p~~va~sp~~~~dg~-~l~v~~~~~~~v~v~D~~t 257 (543)
T 1nir_A 214 KVAEI------KIGIEARSVESSKFKGYEDR-YTIAGAYWPPQFAIMDGET 257 (543)
T ss_dssp EEEEE------ECCSEEEEEEECCSTTCTTT-EEEEEEEESSEEEEEETTT
T ss_pred EEEEE------ecCCCcceEEeCCCcCCCCC-EEEEEEccCCeEEEEeccc
Confidence 33332 2366778888877 433 454443 47899999753
No 139
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=80.64 E-value=7.8 Score=36.35 Aligned_cols=111 Identities=11% Similarity=-0.002 Sum_probs=64.0
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcc-eeeeec------c---
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEE-LLAVCG------L--- 438 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~-~LAV~G------l--- 438 (499)
||.|+ .| +++.++ .|.++++.. +-...++ ........ +.+++++|.+.. +|+++. |
T Consensus 48 spdg~--~l-~~~~~~-~v~~~~~~~-----~g~~~~~--~~~~~~g~---~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 113 (365)
T 1jof_A 48 DHERK--NI-YGAAMK-KWSSFAVKS-----PTEIVHE--ASHPIGGH---PRANDADTNTRAIFLLAAKQPPYAVYANP 113 (365)
T ss_dssp CTTSS--EE-EEEEBT-EEEEEEEEE-----TTEEEEE--EEEECCSS---GGGGCTTSCCEEEEEEECSSTTCCEEEEE
T ss_pred CCCCC--EE-EEEccc-eEEEEEECC-----CCCEEEe--eEeecCCC---CccEEECCCCCEEEEEEecCCcceeccce
Confidence 77663 45 555566 899998731 0000000 00000011 224788887754 566664 3
Q ss_pred -----ceeEEEEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEee--cCceEEeecC
Q psy11311 439 -----KECIVFSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT--ALNIKIYQLR 496 (499)
Q Consensus 439 -----keC~Vlti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT--~~fVKIYDLs 496 (499)
..-.|+.++.+|+ +...+.+.. .+.+..+..+.|-|..+ .|+++. .+.|.+||+.
T Consensus 114 ~~~~~g~v~v~~~~~~g~-~~~~~~~~~-~~~~~~~~~~~~spdG~-~l~~~~~~~~~v~~~~~~ 175 (365)
T 1jof_A 114 FYKFAGYGNVFSVSETGK-LEKNVQNYE-YQENTGIHGMVFDPTET-YLYSADLTANKLWTHRKL 175 (365)
T ss_dssp ESSSCCEEEEEEECTTCC-EEEEEEEEE-CCTTCCEEEEEECTTSS-EEEEEETTTTEEEEEEEC
T ss_pred eecCCceEEEEccCCCCc-CcceEeeEE-eCCCCcceEEEECCCCC-EEEEEcCCCCEEEEEEEC
Confidence 2457788887888 554443321 12467888999999865 465543 4689999986
No 140
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=80.55 E-value=14 Score=34.62 Aligned_cols=102 Identities=4% Similarity=0.007 Sum_probs=58.6
Q ss_pred cCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEec
Q psy11311 368 SSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFT 447 (499)
Q Consensus 368 ~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~ 447 (499)
-||.|+ ++|++.+ +.+.|.++...- ....+-. -+..++.+.++ .+++|++|-.+-.|...+
T Consensus 27 fs~dg~---~la~g~~-~~~~iw~~~~~~---------~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~d~~v~iWd 87 (355)
T 3vu4_A 27 FNQDQS---CLILSTL-KSFEIYNVHPVA---------HIMSQEM---RHLSKVRMLHR---TNYVAFVTGVKEVVHIWD 87 (355)
T ss_dssp ECTTSS---EEEEECS-SEEEEEEETTEE---------EEEEEEC---SCCCEEEECTT---SSEEEEECSSTTEEEEEE
T ss_pred ECCCCC---EEEEEcC-CEEEEEecCCcc---------eeeeeec---CCeEEEEEcCC---CCEEEEEECCccEEEEEE
Confidence 377664 5588644 457788764321 1111110 13445555543 467877777655665555
Q ss_pred C-CCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecCceEEeecCCC
Q psy11311 448 S-GMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLRPE 498 (499)
Q Consensus 448 ~-~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~d 498 (499)
. +|+ .. ..+.. ..-|..+.|-+. .+++++...|+|||+...
T Consensus 88 ~~~~~-~~----~~~~~--~~~v~~v~~~~~---~~~~~~~~~i~i~d~~~~ 129 (355)
T 3vu4_A 88 DVKKQ-DV----SRIKV--DAPVKDLFLSRE---FIVVSYGDVISVFKFGNP 129 (355)
T ss_dssp TTTTE-EE----EEEEC--SSCEEEEEECSS---EEEEEETTEEEEEESSTT
T ss_pred CCCCc-EE----EEEEC--CCceEEEEEcCC---EEEEEEcCEEEEEECCCC
Confidence 3 344 22 22222 346777887543 688889999999998753
No 141
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=79.51 E-value=33 Score=33.22 Aligned_cols=111 Identities=18% Similarity=0.186 Sum_probs=64.3
Q ss_pred eeeccCcccccceEEEEeecC--CeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc--
Q psy11311 364 MCILSSPQSKRQHLVAVSHEK--GKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-- 439 (499)
Q Consensus 364 mc~L~sp~g~rq~LvAVshEk--~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-- 439 (499)
.++--||.|+ +|+.++.++ ..|-+.++.. + .. .++. ..+-.|.+++++|-. ++||+.+-+
T Consensus 182 ~~~~~Spdg~--~la~~s~~~~~~~i~~~d~~t--g----~~-----~~l~--~~~~~~~~~~~spdg-~~la~~~~~~g 245 (415)
T 2hqs_A 182 MSPAWSPDGS--KLAYVTFESGRSALVIQTLAN--G----AV-----RQVA--SFPRHNGAPAFSPDG-SKLAFALSKTG 245 (415)
T ss_dssp EEEEECTTSS--EEEEEECTTSSCEEEEEETTT--C----CE-----EEEE--CCSSCEEEEEECTTS-SEEEEEECTTS
T ss_pred eeeEEcCCCC--EEEEEEecCCCcEEEEEECCC--C----cE-----EEee--cCCCcccCEEEcCCC-CEEEEEEecCC
Confidence 3444488774 564555444 3788887742 1 11 1111 123468899999965 667755533
Q ss_pred eeEEEEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecC----ceEEeecCC
Q psy11311 440 ECIVFSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTAL----NIKIYQLRP 497 (499)
Q Consensus 440 eC~Vlti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~----fVKIYDLs~ 497 (499)
+..|..++-.+.++ ..+.. ....+..+.|-|..+ .|+.+..+ .|.+||+..
T Consensus 246 ~~~i~~~d~~~~~~-----~~l~~-~~~~~~~~~~spdg~-~l~~~s~~~g~~~i~~~d~~~ 300 (415)
T 2hqs_A 246 SLNLYVMDLASGQI-----RQVTD-GRSNNTEPTWFPDSQ-NLAFTSDQAGRPQVYKVNING 300 (415)
T ss_dssp SCEEEEEETTTCCE-----EECCC-CSSCEEEEEECTTSS-EEEEEECTTSSCEEEEEETTS
T ss_pred CceEEEEECCCCCE-----EeCcC-CCCcccceEECCCCC-EEEEEECCCCCcEEEEEECCC
Confidence 55677776543312 11111 245678899999866 57777753 466667753
No 142
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=77.62 E-value=23 Score=30.17 Aligned_cols=106 Identities=18% Similarity=0.181 Sum_probs=61.7
Q ss_pred cCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc---eeEEE
Q psy11311 368 SSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK---ECIVF 444 (499)
Q Consensus 368 ~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk---eC~Vl 444 (499)
-||.|+ .| |+. ..++|.++++..- ... .++....-.-.|..++++|-. ++||+++.. ...|+
T Consensus 49 ~spdg~--~l-~~~-~~~~i~~~d~~~~-----~~~-----~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~l~ 113 (297)
T 2ojh_A 49 WSPDGK--YL-LLN-SEGLLYRLSLAGD-----PSP-----EKVDTGFATICNNDHGISPDG-ALYAISDKVEFGKSAIY 113 (297)
T ss_dssp ECTTSS--EE-EEE-ETTEEEEEESSSC-----CSC-----EECCCTTCCCBCSCCEECTTS-SEEEEEECTTTSSCEEE
T ss_pred ECCCCC--EE-EEE-cCCeEEEEeCCCC-----CCc-----eEeccccccccccceEECCCC-CEEEEEEeCCCCcceEE
Confidence 377664 34 665 4779999987430 001 111111112345678899865 677777643 67888
Q ss_pred EecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEe--ecCceEEeecC
Q psy11311 445 SFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIV--TALNIKIYQLR 496 (499)
Q Consensus 445 ti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVv--T~~fVKIYDLs 496 (499)
.++..+. .... +. ....+..+.|-|..+ .|+++ ....++||++.
T Consensus 114 ~~~~~~~-~~~~----~~--~~~~~~~~~~spdg~-~l~~~~~~~~~~~l~~~~ 159 (297)
T 2ojh_A 114 LLPSTGG-TPRL----MT--KNLPSYWHGWSPDGK-SFTYCGIRDQVFDIYSMD 159 (297)
T ss_dssp EEETTCC-CCEE----CC--SSSSEEEEEECTTSS-EEEEEEEETTEEEEEEEE
T ss_pred EEECCCC-ceEE----ee--cCCCccceEECCCCC-EEEEEECCCCceEEEEEE
Confidence 8876555 2111 11 122377789999876 45533 35678999864
No 143
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=77.56 E-value=20 Score=37.56 Aligned_cols=69 Identities=13% Similarity=0.076 Sum_probs=45.9
Q ss_pred eeccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecC---CCcceeeeecccee
Q psy11311 365 CILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANP---CNEELLAVCGLKEC 441 (499)
Q Consensus 365 c~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP---~ne~~LAV~GlkeC 441 (499)
++..||.|| .| .|+.+.|+|+++++.. -|.+.+.+..+.-.--+|+++| -+.++|.|+.+..-
T Consensus 201 ~v~~SpDGr--~l-yv~~~dg~V~viD~~~-----------~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~ 266 (567)
T 1qks_A 201 ISRLSASGR--YL-FVIGRDGKVNMIDLWM-----------KEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPP 266 (567)
T ss_dssp EEEECTTSC--EE-EEEETTSEEEEEETTS-----------SSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETT
T ss_pred ceEECCCCC--EE-EEEcCCCeEEEEECCC-----------CCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCC
Confidence 334588775 35 5567889999999830 0112233344455557899996 57789999999877
Q ss_pred EEEEec
Q psy11311 442 IVFSFT 447 (499)
Q Consensus 442 ~Vlti~ 447 (499)
.|..|+
T Consensus 267 ~v~ViD 272 (567)
T 1qks_A 267 QYVIMD 272 (567)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 776665
No 144
>2yvr_A Transcription intermediary factor 1-beta; ZF-B_BOX domain, structural genomics, NPPSFA; 1.80A {Homo sapiens}
Probab=77.21 E-value=1.4 Score=31.79 Aligned_cols=31 Identities=23% Similarity=0.582 Sum_probs=25.8
Q ss_pred ccceeeccCCCCCCCceeehhhhhhhcCCCeEEEe
Q psy11311 75 NQHWYHCHTCKMIDGVGVCSVCAQVCHKNHDITYS 109 (499)
Q Consensus 75 rQ~~Y~C~TC~~~~~~gIC~aCA~vCH~GHdLvy~ 109 (499)
..--|.|.+|. ..||..|...-|+||.++..
T Consensus 15 e~l~lfC~~~~----~~iC~~C~~~~H~~H~~~~l 45 (50)
T 2yvr_A 15 EPLVLFCESCD----TLTCRDCQLNAHKDHQYQFL 45 (50)
T ss_dssp CBCCEEETTTT----EEECHHHHHTTTTTCCEEET
T ss_pred CCEEEEeCCCC----EEEecccCCCcCCCCceecH
Confidence 34467899987 68999999999999998755
No 145
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=76.81 E-value=9.6 Score=36.31 Aligned_cols=69 Identities=16% Similarity=0.176 Sum_probs=50.1
Q ss_pred EEeeecCCCcceeeeeccceeEEEEecCC-CCcccceeeeccccCCCceeEeeEEecCCCceEEEeecCceEEeecC
Q psy11311 421 LSVEANPCNEELLAVCGLKECIVFSFTSG-MSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLR 496 (499)
Q Consensus 421 lsl~~NP~ne~~LAV~GlkeC~Vlti~~~-G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs 496 (499)
+...+.|..+.+++++|-.+..|.-.+-. |+ . ...+. ..+.-|..+.|=|..+ +||+.+.+-|.||.|-
T Consensus 319 ~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~-~----~~~~~-~~~~~V~svafspdG~-~LA~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 319 LGACPHPRYMDYFATAHSQHGLIQLINTYEKD-S----NSIPI-QLGMPIVDFCWHQDGS-HLAIATEGSVLLTRLM 388 (393)
T ss_dssp SCCEECSSCTTEEEEEETTTTEEEEEETTCTT-C----CEEEE-ECSSCEEEEEECTTSS-EEEEEESSEEEEEEEG
T ss_pred eeEEEccCCCCEEEEEECCCCEEEEEECCCCc-E----EEEec-CCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEEe
Confidence 34567788889999999888777766542 44 1 11111 2256799999999866 7999999999999873
No 146
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=76.58 E-value=24 Score=33.41 Aligned_cols=101 Identities=10% Similarity=0.044 Sum_probs=58.0
Q ss_pred EEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecC-CCCcccc
Q psy11311 377 LVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTS-GMSQATD 455 (499)
Q Consensus 377 LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~-~G~~v~d 455 (499)
++|.....|.|.|.++..- +. +..+. .-.-.|.+|+++|.+ +|+.+| .+..|...+- .|+ ..
T Consensus 134 ~l~sgs~dg~i~vwd~~~~-------~~---~~~~~--~h~~~V~~l~~~~~~--~l~s~s-~dg~i~vwd~~~~~-~~- 196 (464)
T 3v7d_B 134 YVITGADDKMIRVYDSINK-------KF---LLQLS--GHDGGVWALKYAHGG--ILVSGS-TDRTVRVWDIKKGC-CT- 196 (464)
T ss_dssp EEEEEETTSCEEEEETTTT-------EE---EEEEC--CCSSCEEEEEECSTT--EEEEEE-TTSCEEEEETTTTE-EE-
T ss_pred EEEEEcCCCcEEEEECCCC-------cE---EEEEe--CCCcCEEEEEEcCCC--EEEEEe-CCCCEEEEECCCCc-EE-
Confidence 4466679999999997431 11 11111 234468889998765 555554 4444444443 243 11
Q ss_pred eeeeccccCCCceeEeeEEecCCC-ceEEEee-cCceEEeecCCC
Q psy11311 456 SITINPHCETSNYIIKALWIPGRQ-STLAIVT-ALNIKIYQLRPE 498 (499)
Q Consensus 456 ~l~i~l~l~~~~fIik~~Wipgsq-~~LAVvT-~~fVKIYDLs~d 498 (499)
-.+. .....|..+.|.|... ..|+..+ ...|+|||+...
T Consensus 197 ---~~~~-~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~ 237 (464)
T 3v7d_B 197 ---HVFE-GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKE 237 (464)
T ss_dssp ---EEEC-CCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCC
T ss_pred ---EEEC-CCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCC
Confidence 1111 1357788999997433 2444443 568999998753
No 147
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=76.53 E-value=19 Score=36.57 Aligned_cols=73 Identities=11% Similarity=0.197 Sum_probs=47.3
Q ss_pred EEEeeecCCCcceeeeecc--------------------------------ceeEEEEecCCCCcccceeeeccccCCCc
Q psy11311 420 ILSVEANPCNEELLAVCGL--------------------------------KECIVFSFTSGMSQATDSITINPHCETSN 467 (499)
Q Consensus 420 Vlsl~~NP~ne~~LAV~Gl--------------------------------keC~Vlti~~~G~~v~d~l~i~l~l~~~~ 467 (499)
+-+++++|-. ++||++++ .+..|..++-.+. - ...+......+.
T Consensus 183 ~~~~~~SpDg-~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~-~--~~~~~~~~~~~~ 258 (706)
T 2z3z_A 183 EKGTFWSPKG-SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATG-K--TVYLQTGEPKEK 258 (706)
T ss_dssp CCSEEECTTS-SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTT-E--EEECCCCSCTTC
T ss_pred CceEEECCCC-CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCC-c--eEeeccCCCCce
Confidence 3578888865 78888864 3466776665444 1 112222222468
Q ss_pred eeEeeEEecCCCceEEEeec-C-----ceEEeecCC
Q psy11311 468 YIIKALWIPGRQSTLAIVTA-L-----NIKIYQLRP 497 (499)
Q Consensus 468 fIik~~Wipgsq~~LAVvT~-~-----fVKIYDLs~ 497 (499)
+|..+.|-|..+ .|+++.. + .|.+||+..
T Consensus 259 ~~~~~~~spdg~-~l~~~~~~~~~~~~~v~~~d~~~ 293 (706)
T 2z3z_A 259 FLTNLSWSPDEN-ILYVAEVNRAQNECKVNAYDAET 293 (706)
T ss_dssp EEEEEEECTTSS-EEEEEEECTTSCEEEEEEEETTT
T ss_pred eEeeEEEECCCC-EEEEEEeCCCCCeeEEEEEECCC
Confidence 999999999876 5666543 3 799999864
No 148
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=76.39 E-value=34 Score=33.11 Aligned_cols=72 Identities=13% Similarity=-0.019 Sum_probs=49.1
Q ss_pred eeEEEeeecCCCcceeeeeccc--eeEEEEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecC----ceE
Q psy11311 418 ITILSVEANPCNEELLAVCGLK--ECIVFSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTAL----NIK 491 (499)
Q Consensus 418 F~Vlsl~~NP~ne~~LAV~Glk--eC~Vlti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~----fVK 491 (499)
-.+.+++++|-. ++||+.+-+ ..+|+.++..+. -..+ +.. .+.++..+.|-|..+ .|+.+..+ .|.
T Consensus 267 ~~~~~~~~spdg-~~l~~~s~~~g~~~i~~~d~~~~-~~~~----l~~-~~~~~~~~~~spdG~-~l~~~~~~~g~~~i~ 338 (415)
T 2hqs_A 267 SNNTEPTWFPDS-QNLAFTSDQAGRPQVYKVNINGG-APQR----ITW-EGSQNQDADVSSDGK-FMVMVSSNGGQQHIA 338 (415)
T ss_dssp SCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTSS-CCEE----CCC-SSSEEEEEEECTTSS-EEEEEEECSSCEEEE
T ss_pred CcccceEECCCC-CEEEEEECCCCCcEEEEEECCCC-CEEE----Eec-CCCcccCeEECCCCC-EEEEEECcCCceEEE
Confidence 357889999976 677776654 357777776554 1111 111 367889999999876 67777654 799
Q ss_pred EeecCC
Q psy11311 492 IYQLRP 497 (499)
Q Consensus 492 IYDLs~ 497 (499)
+||+..
T Consensus 339 ~~d~~~ 344 (415)
T 2hqs_A 339 KQDLAT 344 (415)
T ss_dssp EEETTT
T ss_pred EEECCC
Confidence 999864
No 149
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=74.86 E-value=18 Score=34.23 Aligned_cols=98 Identities=12% Similarity=0.135 Sum_probs=55.7
Q ss_pred ceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecCCCCccc
Q psy11311 375 QHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTSGMSQAT 454 (499)
Q Consensus 375 q~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~~G~~v~ 454 (499)
..| +++...|.|.|.++..... ..... ..-+..+ ++++|. +++||+++=...+|+.+.. |+
T Consensus 363 ~~l-~s~s~dg~v~vwd~~~~~~-------~~~~~----~~~~~~~--~~~~~~-~~~l~~~~dg~i~iwd~~~-g~--- 423 (464)
T 3v7d_B 363 KFL-VSAAADGSIRGWDANDYSR-------KFSYH----HTNLSAI--TTFYVS-DNILVSGSENQFNIYNLRS-GK--- 423 (464)
T ss_dssp SEE-EEEETTSEEEEEETTTCCE-------EEEEE----CTTCCCE--EEEEEC-SSEEEEEETTEEEEEETTT-CC---
T ss_pred CEE-EEEeCCCcEEEEECCCCce-------eeeec----CCCCccE--EEEEeC-CCEEEEecCCeEEEEECCC-Cc---
Confidence 445 6667899999999865221 11111 1122233 444443 4788888844555555544 55
Q ss_pred ceeeeccccCCCceeEeeEEecCCCceEEEeec----CceEEeecC
Q psy11311 455 DSITINPHCETSNYIIKALWIPGRQSTLAIVTA----LNIKIYQLR 496 (499)
Q Consensus 455 d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~----~fVKIYDLs 496 (499)
+.-........-|..+.|- + ..|++.+. .+|.|+|++
T Consensus 424 --~~~~~~~~~~~~v~~v~~~-~--~~l~~~~~~~g~~~i~~ldfs 464 (464)
T 3v7d_B 424 --LVHANILKDADQIWSVNFK-G--KTLVAAVEKDGQSFLEILDFS 464 (464)
T ss_dssp --EEESCTTTTCSEEEEEEEE-T--TEEEEEEEETTEEEEEEEECC
T ss_pred --EEehhhccCCCcEEEEEec-C--CEEEEEEEeCCeEEEEEeecC
Confidence 2222223346789999994 3 34555544 488899875
No 150
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=74.52 E-value=26 Score=32.04 Aligned_cols=111 Identities=12% Similarity=0.145 Sum_probs=63.4
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecC-CCcceeeeeccc-eeEEEEe
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANP-CNEELLAVCGLK-ECIVFSF 446 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP-~ne~~LAV~Glk-eC~Vlti 446 (499)
+|.|+ .| |.+...+.|-|.++..- . ..-+..|. .-.-.|.+|+++| .+.++||.+|.. ...|.-+
T Consensus 22 s~~g~--~l-asgs~D~~v~lwd~~~~-------~-~~~~~~l~--gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~ 88 (316)
T 3bg1_A 22 DYYGT--RL-ATCSSDRSVKIFDVRNG-------G-QILIADLR--GHEGPVWQVAWAHPMYGNILASCSYDRKVIIWRE 88 (316)
T ss_dssp CGGGC--EE-EEEETTTEEEEEEEETT-------E-EEEEEEEE--CCSSCEEEEEECCGGGSSCEEEEETTSCEEEECC
T ss_pred cCCCC--EE-EEEeCCCeEEEEEecCC-------C-cEEEEEEc--CCCccEEEEEeCCCCCCCEEEEEECCCEEEEEEC
Confidence 56663 34 77778899999987421 0 00011111 1223688999975 456788888864 3444444
Q ss_pred cCCCCcccceeeeccccCCCceeEeeEEecCCCc-eEEEee-cCceEEeecCC
Q psy11311 447 TSGMSQATDSITINPHCETSNYIIKALWIPGRQS-TLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 447 ~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~-~LAVvT-~~fVKIYDLs~ 497 (499)
.. |. .. ....+. .....|..+.|-|.... .||... ...|+|||+..
T Consensus 89 ~~-~~-~~--~~~~~~-~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~ 136 (316)
T 3bg1_A 89 EN-GT-WE--KSHEHA-GHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTG 136 (316)
T ss_dssp SS-SC-CC--EEEEEC-CCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECS
T ss_pred CC-Cc-ce--EEEEcc-CCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCC
Confidence 32 32 11 111111 12567999999997433 455544 45799999864
No 151
>2d8u_A Ubiquitin ligase TRIM63; tripartite motif-containing 63, muscle-specific ring finger protein 1, MURF1, ring finger protein 28; NMR {Homo sapiens} SCOP: g.43.1.1
Probab=72.19 E-value=1.5 Score=32.99 Aligned_cols=30 Identities=30% Similarity=0.579 Sum_probs=24.2
Q ss_pred cceeeccCCCCCCCceeehhhhhh-hcCCCeEEEe
Q psy11311 76 QHWYHCHTCKMIDGVGVCSVCAQV-CHKNHDITYS 109 (499)
Q Consensus 76 Q~~Y~C~TC~~~~~~gIC~aCA~v-CH~GHdLvy~ 109 (499)
..-|.|.+|. ..||..|... -|+||.++..
T Consensus 18 ~l~lfC~~d~----~~iC~~C~~~~~H~~H~~~~l 48 (64)
T 2d8u_A 18 KINIYCLTCE----VPTCSMCKVFGIHKACEVAPL 48 (64)
T ss_dssp CCCSEESSSC----CCCCSHHHHSSSTTSSCEECT
T ss_pred ccceEcCcCC----ceeCccccCCCcCCCCCeeCH
Confidence 3457899987 5799999974 9999999754
No 152
>2did_A Tripartite motif protein 39; ZF-B-box domian, Zn binding, one sequence two fold, NPPSFA; NMR {Homo sapiens} SCOP: g.43.1.1 PDB: 2dif_A
Probab=71.68 E-value=2.3 Score=31.09 Aligned_cols=32 Identities=22% Similarity=0.410 Sum_probs=25.7
Q ss_pred ccceeeccCCCCCCCceeehhhhh-hhcCCCeEEEee
Q psy11311 75 NQHWYHCHTCKMIDGVGVCSVCAQ-VCHKNHDITYSK 110 (499)
Q Consensus 75 rQ~~Y~C~TC~~~~~~gIC~aCA~-vCH~GHdLvy~K 110 (499)
...-|.|.+|. ..||..|.. .-|+||.++...
T Consensus 16 e~l~lfC~~d~----~~iC~~C~~~~~H~~H~~~~l~ 48 (53)
T 2did_A 16 EALSLFCYEDQ----EAVCLICAISHTHRAHTVVPLS 48 (53)
T ss_dssp CBCCEEESSSC----SEECHHHHTSSTTTTSCEEECC
T ss_pred CeeeEEeCCCC----eEEeccccCCCCCCCCcEeeHH
Confidence 44567888876 689999997 799999997553
No 153
>2csv_A Tripartite motif protein 29; ZF-B_BOX domain, TRIM29, ataxia-telangiectasia group D-associated protein, ATDC, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.43.1.1
Probab=71.09 E-value=2.5 Score=32.82 Aligned_cols=31 Identities=26% Similarity=0.440 Sum_probs=25.4
Q ss_pred ccceeeccCCCCCCCceeehhhhhhhcCCCeEEEe
Q psy11311 75 NQHWYHCHTCKMIDGVGVCSVCAQVCHKNHDITYS 109 (499)
Q Consensus 75 rQ~~Y~C~TC~~~~~~gIC~aCA~vCH~GHdLvy~ 109 (499)
..--|.|.+|. ..||..|...-|+||.++..
T Consensus 26 e~l~lfC~~d~----~~iC~~C~~~~H~~H~~~~l 56 (72)
T 2csv_A 26 KTMELFCQTDQ----TCICYLCMFQEHKNHSTVTV 56 (72)
T ss_dssp CBCCEEESSSC----CEECHHHHHTTTSSSCEEEH
T ss_pred CceEEEeCCCC----eEEccccCCCCCCCCCEecH
Confidence 44567899887 58999999999999999754
No 154
>2dja_A Midline-2; tripartite motif protein 1, ZF-B_BOX, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.43.1.1 PDB: 2dq5_A
Probab=70.34 E-value=1.7 Score=34.39 Aligned_cols=31 Identities=16% Similarity=0.386 Sum_probs=25.3
Q ss_pred ccceeeccCCCCCCCceeehhhhh-hhcCCCeEEEe
Q psy11311 75 NQHWYHCHTCKMIDGVGVCSVCAQ-VCHKNHDITYS 109 (499)
Q Consensus 75 rQ~~Y~C~TC~~~~~~gIC~aCA~-vCH~GHdLvy~ 109 (499)
..--|.|.+|. ..||..|.. .-|+||.++..
T Consensus 27 e~l~lfC~~d~----~~iC~~C~~~~~H~~H~~~~l 58 (84)
T 2dja_A 27 EKVNMYCVSDD----QLICALCKLVGRHRDHQVASL 58 (84)
T ss_dssp SCCCEEETTTT----EEECHHHHHTSTTTTCCBCCC
T ss_pred ccccEEcCCCC----ceEcccCcCCCCCCCCCccCH
Confidence 33567899887 689999998 79999998744
No 155
>3ddt_A E3 ubiquitin-protein ligase TRIM63; zinc-binding motif, ring-like fold, coiled coil, cytoplasm, metal-binding, muscle protein, nucleus; 1.90A {Homo sapiens} SCOP: g.43.1.1 PDB: 3q1d_A
Probab=69.16 E-value=2.8 Score=30.09 Aligned_cols=28 Identities=32% Similarity=0.576 Sum_probs=22.7
Q ss_pred eeeccCCCCCCCceeehhhh-hhhcCCCeEEEe
Q psy11311 78 WYHCHTCKMIDGVGVCSVCA-QVCHKNHDITYS 109 (499)
Q Consensus 78 ~Y~C~TC~~~~~~gIC~aCA-~vCH~GHdLvy~ 109 (499)
-+.|.+|. ..||..|. ..-|+||+++..
T Consensus 18 ~lfC~~d~----~~iC~~C~~~~~H~~H~~~~l 46 (48)
T 3ddt_A 18 NIYCLTCE----VPTCSMCKVFGIHKACEVAPL 46 (48)
T ss_dssp CEEETTTT----EEECHHHHHHSTTTTSCEEEC
T ss_pred cEEcCCCC----eeEcccccCCCcCCCCcEEeC
Confidence 47788886 68999998 458999998754
No 156
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=67.96 E-value=19 Score=32.92 Aligned_cols=106 Identities=12% Similarity=0.128 Sum_probs=61.5
Q ss_pred EEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCC---cceeeeeccc-eeEEEEecCC--C
Q psy11311 377 LVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCN---EELLAVCGLK-ECIVFSFTSG--M 450 (499)
Q Consensus 377 LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~n---e~~LAV~Glk-eC~Vlti~~~--G 450 (499)
++|.+.+.+.|-|.++..- ..-+ .+..+. .-.-.|.+++++|.. ..+||.+|.. ...|..+... +
T Consensus 181 ~l~sgs~D~~v~lWd~~~~----~~~~---~~~~l~--~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~ 251 (316)
T 3bg1_A 181 RFASGGCDNLIKLWKEEED----GQWK---EEQKLE--AHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSN 251 (316)
T ss_dssp BEECCBTTSBCCEEEECTT----SCEE---EEECCB--CCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCC
T ss_pred eEEEecCCCeEEEEEeCCC----Cccc---eeeecc--cCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCcccc
Confidence 4477778889999987321 0000 011111 112358999999975 4678777765 3445544431 2
Q ss_pred CcccceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 451 SQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 451 ~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
. ...+ .++ .....|..+.|-|..+ .||... ...|+|||+..
T Consensus 252 ~-~~~~-~~~---~~~~~v~~v~~sp~g~-~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 252 T-WSPK-LLH---KFNDVVWHVSWSITAN-ILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp C-CBCC-EEE---ECSSCEEEEEECTTTC-CEEEEESSSCEEEEEECT
T ss_pred c-hhhh-hhh---cCCCcEEEEEEcCCCC-EEEEEcCCCeEEEEEECC
Confidence 1 1111 111 1256889999999866 465554 56899999864
No 157
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=65.31 E-value=58 Score=30.94 Aligned_cols=100 Identities=10% Similarity=0.132 Sum_probs=57.0
Q ss_pred eEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEecCCCCccc
Q psy11311 376 HLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSFTSGMSQAT 454 (499)
Q Consensus 376 ~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti~~~G~~v~ 454 (499)
.++|++...|.|.|.++..- +. +..+. .-.-.|.+|+++| ++|+++|.. ...|..+..... +.
T Consensus 184 ~~l~sg~~dg~i~vwd~~~~-------~~---~~~~~--~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~-~~ 247 (435)
T 1p22_A 184 RVIITGSSDSTVRVWDVNTG-------EM---LNTLI--HHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTD-IT 247 (435)
T ss_dssp SEEEEEETTSCEEEEESSSC-------CE---EEEEC--CCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSC-CE
T ss_pred CEEEEEcCCCeEEEEECCCC-------cE---EEEEc--CCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCC-ce
Confidence 35577789999999998431 10 11111 1233578888874 577777654 444555544332 21
Q ss_pred ceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 455 DSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 455 d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
-. .........|..+.| .+ ..|++.+ ...|+|||+..
T Consensus 248 ~~---~~~~~~~~~v~~~~~-~~--~~l~s~~~dg~i~vwd~~~ 285 (435)
T 1p22_A 248 LR---RVLVGHRAAVNVVDF-DD--KYIVSASGDRTIKVWNTST 285 (435)
T ss_dssp EE---EEECCCSSCEEEEEE-ET--TEEEEEETTSEEEEEETTT
T ss_pred ee---eEecCCCCcEEEEEe-CC--CEEEEEeCCCeEEEEECCc
Confidence 11 111123567888888 33 3566655 45799999865
No 158
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=63.72 E-value=50 Score=33.92 Aligned_cols=103 Identities=13% Similarity=0.162 Sum_probs=56.0
Q ss_pred EEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEe--eecCCCcceeeeeccce-eEEEEecCCCCccc
Q psy11311 378 VAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSV--EANPCNEELLAVCGLKE-CIVFSFTSGMSQAT 454 (499)
Q Consensus 378 vAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl--~~NP~ne~~LAV~Glke-C~Vlti~~~G~~v~ 454 (499)
||++...|.|.|.++..- . + .+..+... .-.|.+| +++|..+.+||.+|... ..|.-+.. +. ..
T Consensus 280 lasgs~DgtV~lWD~~~~-------~-~-~~~~~~~H--~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~-~~-~~ 346 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDP-------E-V-PSFYDQVH--DSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD-IA-TT 346 (524)
T ss_dssp EEEEETTSEEEEEETTBC-------S-S-CSEEEECS--SSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGG-HH-HH
T ss_pred EEEEeCCCEEEEEECCCC-------C-C-ceEEeecc--cccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC-CC-cc
Confidence 488889999999999631 0 0 00111111 1247788 45554347888877653 33443332 23 11
Q ss_pred ceeeeccccCCCceeEeeEEecCCCceEEEe-ecCceEEeecCC
Q psy11311 455 DSITINPHCETSNYIIKALWIPGRQSTLAIV-TALNIKIYQLRP 497 (499)
Q Consensus 455 d~l~i~l~l~~~~fIik~~Wipgsq~~LAVv-T~~fVKIYDLs~ 497 (499)
-.+.-+. .+.-|..+.|-|..+. ||.. ..+.|||||+..
T Consensus 347 ~~~~~~~---~~~~v~~v~fsp~~~~-l~s~~~d~tv~lwd~~~ 386 (524)
T 2j04_B 347 KTTVSRF---RGSNLVPVVYCPQIYS-YIYSDGASSLRAVPSRA 386 (524)
T ss_dssp CEEEEEC---SCCSCCCEEEETTTTE-EEEECSSSEEEEEETTC
T ss_pred ccccccc---ccCcccceEeCCCcCe-EEEeCCCCcEEEEECcc
Confidence 1111111 1223678999997664 4433 344799999864
No 159
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=63.72 E-value=65 Score=32.65 Aligned_cols=106 Identities=8% Similarity=0.096 Sum_probs=62.8
Q ss_pred Cc--ccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEE-eeecCCCcceeeeeccce----e
Q psy11311 369 SP--QSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILS-VEANPCNEELLAVCGLKE----C 441 (499)
Q Consensus 369 sp--~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vls-l~~NP~ne~~LAV~Glke----C 441 (499)
|| .|+ +++++...|.+.|..+.. +. + .+++|.. -.+.|.+ ++++|.. +.|++.+-.+ .
T Consensus 318 sp~~dg~---~l~~~~~~g~~~l~~~~~-----~~-~---~~~~l~~--~~~~v~~~~~~spdg-~~l~~~~~~~~~~~~ 382 (706)
T 2z3z_A 318 LPGSNNQ---FIWQSRRDGWNHLYLYDT-----TG-R---LIRQVTK--GEWEVTNFAGFDPKG-TRLYFESTEASPLER 382 (706)
T ss_dssp CTTCSSE---EEEEECTTSSCEEEEEET-----TS-C---EEEECCC--SSSCEEEEEEECTTS-SEEEEEESSSCTTCB
T ss_pred ecCCCCE---EEEEEccCCccEEEEEEC-----CC-C---EEEecCC--CCeEEEeeeEEcCCC-CEEEEEecCCCCceE
Confidence 67 664 557776777777766531 11 1 1122211 2466776 7889866 5666666554 5
Q ss_pred EEEEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecC-----ceEEeecCC
Q psy11311 442 IVFSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTAL-----NIKIYQLRP 497 (499)
Q Consensus 442 ~Vlti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~-----fVKIYDLs~ 497 (499)
+|+.++..+. ...++. .+..+..+.|-|..+ .|+++... -|.+||+..
T Consensus 383 ~l~~~d~~~~-~~~~l~------~~~~~~~~~~spdg~-~l~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 383 HFYCIDIKGG-KTKDLT------PESGMHRTQLSPDGS-AIIDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp EEEEEETTCC-CCEESC------CSSSEEEEEECTTSS-EEEEEEECSSCSCEEEEEESSS
T ss_pred EEEEEEcCCC-Cceecc------CCCceEEEEECCCCC-EEEEEecCCCCCcEEEEEECCC
Confidence 9999987554 222221 233466889998866 46665443 399999864
No 160
>2yrg_A Tripartite motif-containing protein 5; B-box domain, ring finger protein 88, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=63.28 E-value=4.2 Score=30.73 Aligned_cols=41 Identities=15% Similarity=0.280 Sum_probs=29.3
Q ss_pred CCCCCcccccccccccccceeeccCCCCCCCceeehhhhh-hhcCCCeEEEe
Q psy11311 59 LCNKLCTYTITQKEFMNQHWYHCHTCKMIDGVGVCSVCAQ-VCHKNHDITYS 109 (499)
Q Consensus 59 l~~~~CTf~~TG~~~irQ~~Y~C~TC~~~~~~gIC~aCA~-vCH~GHdLvy~ 109 (499)
+....|.-- ....-|.|.+|. ..||..|.. .-|+||.++..
T Consensus 12 ~~~~~C~~H------~e~L~lfC~~d~----~~iC~~C~~s~eH~~H~~~~l 53 (59)
T 2yrg_A 12 QKVDHCARH------GEKLLLFCQEDG----KVICWLCERSQEHRGHHTFPT 53 (59)
T ss_dssp CCSSBCTTT------CCBCCEEETTTC----SEECHHHHTSTTTTTCCEEEC
T ss_pred hcCccChhh------CceeeeecCCCC----cEEecccCCCCcCCCCcEeeH
Confidence 334457544 234457788766 689999998 79999998754
No 161
>2egm_A Tripartite motif-containing protein 41; ZF-B_BOX domain, tripartite motif protein 41, TRIM41, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.90 E-value=3.3 Score=31.21 Aligned_cols=29 Identities=24% Similarity=0.586 Sum_probs=23.3
Q ss_pred ccceeeccCCCCCCCceeehhhhh-hhcCCCeEE
Q psy11311 75 NQHWYHCHTCKMIDGVGVCSVCAQ-VCHKNHDIT 107 (499)
Q Consensus 75 rQ~~Y~C~TC~~~~~~gIC~aCA~-vCH~GHdLv 107 (499)
...-|.|.+|. ..||..|.. .-|+||.++
T Consensus 26 e~L~lfC~~d~----~~iC~~C~~~~eH~~H~~~ 55 (57)
T 2egm_A 26 EALKLFCEVDE----EAICVVCRESRSHKQHSVV 55 (57)
T ss_dssp CBCCEEETTTT----EEECHHHHHSHHHHSSCEE
T ss_pred ceeeEEcCCCC----cEEecccCCCCCCCCCcEe
Confidence 44567788765 789999997 799999875
No 162
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=62.67 E-value=57 Score=33.00 Aligned_cols=31 Identities=10% Similarity=0.172 Sum_probs=23.0
Q ss_pred CceeEeeEEecCCCceEEEeec-----CceEEeecCC
Q psy11311 466 SNYIIKALWIPGRQSTLAIVTA-----LNIKIYQLRP 497 (499)
Q Consensus 466 ~~fIik~~Wipgsq~~LAVvT~-----~fVKIYDLs~ 497 (499)
..++..+.|-|..+ .|+...+ ..|.+||+..
T Consensus 254 ~~~~~~~~~SpDg~-~l~~~~~~~~~~~~i~~~d~~~ 289 (723)
T 1xfd_A 254 EYYITMVKWATSTK-VAVTWLNRAQNVSILTLCDATT 289 (723)
T ss_dssp SEEEEEEEESSSSE-EEEEEEETTSCEEEEEEEETTT
T ss_pred cceeEEEEEeCCCe-EEEEEEcCCCCeEEEEEEeCCC
Confidence 57899999999876 5555544 3688899754
No 163
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=57.98 E-value=76 Score=31.86 Aligned_cols=74 Identities=7% Similarity=-0.040 Sum_probs=49.3
Q ss_pred cceeEEEeeecCCCcceeeeeccce---------eEEEEecCCC------CcccceeeeccccCCCceeEeeEEecCCCc
Q psy11311 416 LPITILSVEANPCNEELLAVCGLKE---------CIVFSFTSGM------SQATDSITINPHCETSNYIIKALWIPGRQS 480 (499)
Q Consensus 416 VpF~Vlsl~~NP~ne~~LAV~Glke---------C~Vlti~~~G------~~v~d~l~i~l~l~~~~fIik~~Wipgsq~ 480 (499)
-...+.+++++|-. +.||.+.... ..|..++-.| . -..++ ......++..+.|=|..+
T Consensus 128 ~~~~~~~~~~spDg-~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~l----~~~~~~~~~~~~~SpDG~- 200 (662)
T 3azo_A 128 GGLRWADPVLLPER-GEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRS-AVREL----SDDAHRFVTGPRLSPDGR- 200 (662)
T ss_dssp TCEEEEEEEEETTT-TEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGG-GSEES----SCSCSSEECCCEECTTSS-
T ss_pred CCccccCcEECCCC-CEEEEEEecccCCCCCCceeEEEEEECCCCccccCC-ceeEE----EecCCCcccCceECCCCC-
Confidence 35678899999976 5777666542 7888888766 3 11111 102246778889999866
Q ss_pred eEEEeecC---------ceEEeecC
Q psy11311 481 TLAIVTAL---------NIKIYQLR 496 (499)
Q Consensus 481 ~LAVvT~~---------fVKIYDLs 496 (499)
+||.+..+ .|.+||+.
T Consensus 201 ~la~~~~~~~~~~~~~~~i~~~d~~ 225 (662)
T 3azo_A 201 QAVWLAWDHPRMPWEGTELKTARVT 225 (662)
T ss_dssp EEEEEEECTTCCTTTCEEEEEEEEC
T ss_pred EEEEEECCCCCCCCCCcEEEEEEEC
Confidence 67777643 58888886
No 164
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=57.60 E-value=1e+02 Score=27.16 Aligned_cols=104 Identities=8% Similarity=0.120 Sum_probs=60.2
Q ss_pred eEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccce-eEEEEecCCCCccc
Q psy11311 376 HLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKE-CIVFSFTSGMSQAT 454 (499)
Q Consensus 376 ~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glke-C~Vlti~~~G~~v~ 454 (499)
+|++.....+.|.+++...-. +..+.....-..+..|++.|.. .|.|++..+ ..|..++.+|. ..
T Consensus 176 ~l~v~~~~~~~i~~~~~~g~~-----------~~~~~~~g~~~~p~~i~~d~~G--~l~v~~~~~~~~i~~~~~~g~-~~ 241 (286)
T 1q7f_A 176 EIFISDNRAHCVKVFNYEGQY-----------LRQIGGEGITNYPIGVGINSNG--EILIADNHNNFNLTIFTQDGQ-LI 241 (286)
T ss_dssp EEEEEEGGGTEEEEEETTCCE-----------EEEESCTTTSCSEEEEEECTTC--CEEEEECSSSCEEEEECTTSC-EE
T ss_pred CEEEEECCCCEEEEEcCCCCE-----------EEEEccCCccCCCcEEEECCCC--CEEEEeCCCCEEEEEECCCCC-EE
Confidence 464544457889998853210 1111111111235688898854 456666555 47888889898 55
Q ss_pred ceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEeecCCC
Q psy11311 455 DSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRPE 498 (499)
Q Consensus 455 d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~d 498 (499)
..+..+.. ...+..+.|-|.. +|.|+. +..|+||++...
T Consensus 242 ~~~~~~~~---~~~~~~i~~~~~g--~l~vs~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 242 SALESKVK---HAQCFDVALMDDG--SVVLASKDYRLYIYRYVQL 281 (286)
T ss_dssp EEEEESSC---CSCEEEEEEETTT--EEEEEETTTEEEEEECSCC
T ss_pred EEEcccCC---CCcceeEEECCCC--cEEEECCCCeEEEEEcccc
Confidence 55544322 3345667777764 454443 557999998653
No 165
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=56.19 E-value=42 Score=34.50 Aligned_cols=76 Identities=7% Similarity=0.023 Sum_probs=48.6
Q ss_pred eEEEeeecCC-----Ccceeeeeccc-eeEEEEecCCCCcccce-eee-cc--ccC-CCceeEeeEEecCCCceEEEeec
Q psy11311 419 TILSVEANPC-----NEELLAVCGLK-ECIVFSFTSGMSQATDS-ITI-NP--HCE-TSNYIIKALWIPGRQSTLAIVTA 487 (499)
Q Consensus 419 ~Vlsl~~NP~-----ne~~LAV~Glk-eC~Vlti~~~G~~v~d~-l~i-~l--~l~-~~~fIik~~Wipgsq~~LAVvT~ 487 (499)
.|.+|+++|. +.++||.+|.. .+.|..+..... .... +.+ .| .+. ....|..+.|-|+. .||..+.
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~-~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~--~lasgs~ 285 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNAT-DVHVFKMCEKPSLTLSLADSLITTFDFLSPT--TVVCGFK 285 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSS-SSSEEECCCSCSEEECCTTTCEEEEEESSSS--EEEEEET
T ss_pred cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcc-ccccceeecCceEEEEcCCCCEEEEEecCCC--eEEEEeC
Confidence 4889999996 24689988876 577777754322 1100 000 11 111 24789999999863 5666554
Q ss_pred -CceEEeecCC
Q psy11311 488 -LNIKIYQLRP 497 (499)
Q Consensus 488 -~fVKIYDLs~ 497 (499)
..|+|||+..
T Consensus 286 DgtV~lWD~~~ 296 (524)
T 2j04_B 286 NGFVAEFDLTD 296 (524)
T ss_dssp TSEEEEEETTB
T ss_pred CCEEEEEECCC
Confidence 6899999963
No 166
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=54.67 E-value=1.2e+02 Score=30.15 Aligned_cols=109 Identities=11% Similarity=0.142 Sum_probs=61.2
Q ss_pred eeeccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccc-eeEEEeeecCCCcceeeeecc----
Q psy11311 364 MCILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLP-ITILSVEANPCNEELLAVCGL---- 438 (499)
Q Consensus 364 mc~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~Vp-F~Vlsl~~NP~ne~~LAV~Gl---- 438 (499)
.++.-||.|+ .|+.++...|.+-|..+ . ....+++| . -+ ..|.+++++|- .+|++...
T Consensus 25 ~~~~~~~DG~--~la~~s~~~g~~~lw~~----~--~g~~~~lt-----~--~~~~~~~~~~~spd--~~l~~~~~~~g~ 87 (582)
T 3o4h_A 25 YSLQGVVDGD--KLLVVGFSEGSVNAYLY----D--GGETVKLN-----R--EPINSVLDPHYGVG--RVILVRDVSKGA 87 (582)
T ss_dssp EEEEEEETTT--EEEEEEEETTEEEEEEE----E--TTEEEECC-----S--SCCSEECEECTTCS--EEEEEEECSTTS
T ss_pred heeecCCCCC--eEEEEEccCCceeEEEE----c--CCCcEeee-----c--ccccccccccCCCC--eEEEEeccCCCC
Confidence 4444578875 45334444888888884 1 12222222 1 12 35778889886 67766654
Q ss_pred ceeEEEEecC--CCCcccceeeeccccCCCceeEeeEEecCCCc-eEEEeecCceEEeecCC
Q psy11311 439 KECIVFSFTS--GMSQATDSITINPHCETSNYIIKALWIPGRQS-TLAIVTALNIKIYQLRP 497 (499)
Q Consensus 439 keC~Vlti~~--~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~-~LAVvT~~fVKIYDLs~ 497 (499)
+.-.|+.++. .|. . ..+ ....+. .-..|-|..+. .++-...+.+.|||+..
T Consensus 88 ~~~~l~~~~~~~~g~-~---~~l--~~~~~~--~~~~~s~dg~~~~~~s~~~~~~~l~d~~~ 141 (582)
T 3o4h_A 88 EQHALFKVNTSRPGE-E---QRL--EAVKPM--RILSGVDTGEAVVFTGATEDRVALYALDG 141 (582)
T ss_dssp CCEEEEEEETTSTTC-C---EEC--TTSCSB--EEEEEEECSSCEEEEEECSSCEEEEEEET
T ss_pred cceEEEEEeccCCCc-c---ccc--cCCCCc--eeeeeCCCCCeEEEEecCCCCceEEEccC
Confidence 5668888887 676 2 111 111232 24578887654 23333455677999853
No 167
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=54.57 E-value=94 Score=32.55 Aligned_cols=99 Identities=14% Similarity=0.049 Sum_probs=55.9
Q ss_pred eEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecC---CCCc
Q psy11311 376 HLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTS---GMSQ 452 (499)
Q Consensus 376 ~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~---~G~~ 452 (499)
.++++..+.+.|+|+++.. -+.+.+.++++.+-.++++|-. +||.|++- +-.|..|+- .++
T Consensus 168 ~~~V~~~~~~~V~viD~~t-------------~~v~~~i~~g~~p~~v~~SpDG-r~lyv~~~-dg~V~viD~~~~t~~- 231 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGST-------------YEIKTVLDTGYAVHISRLSASG-RYLFVIGR-DGKVNMIDLWMKEPT- 231 (567)
T ss_dssp EEEEEETTTTEEEEEETTT-------------CCEEEEEECSSCEEEEEECTTS-CEEEEEET-TSEEEEEETTSSSCC-
T ss_pred eEEEEeCCCCeEEEEECCC-------------CeEEEEEeCCCCccceEECCCC-CEEEEEcC-CCeEEEEECCCCCCc-
Confidence 3434444678999998732 1223334566666788999955 78888874 446777765 455
Q ss_pred ccceeeeccccCCCceeEeeEEec--CCCceEEEeec---CceEEeecC
Q psy11311 453 ATDSITINPHCETSNYIIKALWIP--GRQSTLAIVTA---LNIKIYQLR 496 (499)
Q Consensus 453 v~d~l~i~l~l~~~~fIik~~Wip--gsq~~LAVvT~---~fVKIYDLs 496 (499)
+..++. .|..-+.+.+=| +-....++|+| ..|.|||..
T Consensus 232 ~v~~i~------~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~ 274 (567)
T 1qks_A 232 TVAEIK------IGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGE 274 (567)
T ss_dssp EEEEEE------CCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETT
T ss_pred EeEEEe------cCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECC
Confidence 444433 244445555551 10123344444 556677643
No 168
>1fre_A Nuclear factor XNF7; zinc-binding protein, BBOX, development, MID-blastula- transition; NMR {Xenopus laevis} SCOP: g.43.1.1
Probab=53.92 E-value=2.6 Score=29.31 Aligned_cols=28 Identities=18% Similarity=0.419 Sum_probs=21.8
Q ss_pred cceeeccCCCCCCCceeehhhhh-hhcCCCeEE
Q psy11311 76 QHWYHCHTCKMIDGVGVCSVCAQ-VCHKNHDIT 107 (499)
Q Consensus 76 Q~~Y~C~TC~~~~~~gIC~aCA~-vCH~GHdLv 107 (499)
..-|.|.+|. ..||..|.. .-|+||.++
T Consensus 12 ~l~lfC~~d~----~~iC~~C~~~~~H~~H~~~ 40 (42)
T 1fre_A 12 RLKLYCKDDG----TLSCVICRDSLKHASHNFL 40 (42)
T ss_dssp SCCCCCCSSS----SSSCCTTSSCSSCTTCCCC
T ss_pred eeeEEeCCCC----eEEeccCCCCCCCCCCcEe
Confidence 3456777765 689999997 799999863
No 169
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=53.09 E-value=33 Score=34.72 Aligned_cols=130 Identities=13% Similarity=0.079 Sum_probs=71.9
Q ss_pred hHHHHHhccccceeeeeeccCcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCC
Q psy11311 349 TIRQLISNNSIRRTCMCILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPC 428 (499)
Q Consensus 349 tirqlls~~~irR~amc~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ 428 (499)
++..++... ......++--||.|+ +++. ...|.|-+.++..-- .+..+.. .....+.|.+++++|-
T Consensus 6 ~~~~~~~~~-~~~~~~~~~~spdg~---~~~~-~~dg~i~~~d~~~g~-------~~~~~~~--~~~~~~~v~~~~~SpD 71 (723)
T 1xfd_A 6 TVEDLFSED-FKIHDPEAKWISDTE---FIYR-EQKGTVRLWNVETNT-------STVLIEG--KKIESLRAIRYEISPD 71 (723)
T ss_dssp CHHHHTCTT-TCCCCCCCCBSSSSC---BCCC-CSSSCEEEBCGGGCC-------CEEEECT--TTTTTTTCSEEEECTT
T ss_pred cHHHHhCCC-CcccccccEEcCCCc---EEEE-eCCCCEEEEECCCCc-------EEEEecc--ccccccccceEEECCC
Confidence 455555432 333344555578775 5465 466788888874321 1111111 0011124678999996
Q ss_pred Ccceeeeeccc--------eeEEEEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecCceEEeecCC
Q psy11311 429 NEELLAVCGLK--------ECIVFSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLRP 497 (499)
Q Consensus 429 ne~~LAV~Glk--------eC~Vlti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~ 497 (499)
. ++||.++-. +-.|...+-.+.+. ..+......+..+..+.|=|..+ .||.+.+..|.+||+..
T Consensus 72 g-~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~~~~SPdG~-~la~~~~~~i~~~~~~~ 143 (723)
T 1xfd_A 72 R-EYALFSYNVEPIYQHSYTGYYVLSKIPHGDP---QSLDPPEVSNAKLQYAGWGPKGQ-QLIFIFENNIYYCAHVG 143 (723)
T ss_dssp S-SEEEEEESCCCCSSSCCCSEEEEEESSSCCC---EECCCTTCCSCCCSBCCBCSSTT-CEEEEETTEEEEESSSS
T ss_pred C-CEEEEEecCccceeecceeeEEEEECCCCce---EeccCCccccccccccEECCCCC-EEEEEECCeEEEEECCC
Confidence 5 677776532 14455554333202 11221111234577899999876 79999999999999864
No 170
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=52.97 E-value=34 Score=34.81 Aligned_cols=92 Identities=18% Similarity=0.225 Sum_probs=56.8
Q ss_pred ccccccccccccc--cceeEEEeeecCCCcceeeeecccee-----EEEEecCC-CCcccceeeecccc--------C--
Q psy11311 403 KRKLTLIKLASVS--LPITILSVEANPCNEELLAVCGLKEC-----IVFSFTSG-MSQATDSITINPHC--------E-- 464 (499)
Q Consensus 403 ~~Kltl~rLs~~~--VpF~Vlsl~~NP~ne~~LAV~GlkeC-----~Vlti~~~-G~~v~d~l~i~l~l--------~-- 464 (499)
++++|+..+-... .+-.|.+++++|-. ++||..+.++- .|..++-. |+ ...-+..+... +
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~SpdG-~~la~~~~~d~~~~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~~~~~~~~ 97 (741)
T 2ecf_A 20 AEKLTLEAITGPLPLSGPTLMKPKVAPDG-SRVTFLRGKDSDRNQLDLWSYDIGSGQ-TRLLVDSKVVLPGTETLSDEEK 97 (741)
T ss_dssp --CCCHHHHTSSSCTTCCCCEEEEECTTS-SEEEEEECCSSCTTEEEEEEEETTTCC-EEEEECGGGTC-----------
T ss_pred cccccHHHHhccCCcCCCCCCCceEecCC-CEEEEEeccCCCCcccEEEEEECCCCc-eeEccchhhcccccccccchhh
Confidence 4567777775322 24568899999965 78888887433 56665543 33 22111111000 0
Q ss_pred --------CC-ceeEeeEEecCCCceEEEeecCceEEeecCC
Q psy11311 465 --------TS-NYIIKALWIPGRQSTLAIVTALNIKIYQLRP 497 (499)
Q Consensus 465 --------~~-~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~ 497 (499)
.+ ..|..+.|=|..+ .|+++.+..|.|||+..
T Consensus 98 ~~~~~~~~~~~~~v~~~~~SpDg~-~l~~~~~~~i~~~d~~~ 138 (741)
T 2ecf_A 98 ARRERQRIAAMTGIVDYQWSPDAQ-RLLFPLGGELYLYDLKQ 138 (741)
T ss_dssp ---------CCEESCCCEECTTSS-EEEEEETTEEEEEESSS
T ss_pred hhhhhhhhccccCcceeEECCCCC-EEEEEeCCcEEEEECCC
Confidence 00 3477899999876 68888889999999864
No 171
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=52.66 E-value=1.6e+02 Score=27.97 Aligned_cols=78 Identities=12% Similarity=0.072 Sum_probs=48.5
Q ss_pred cceeEEEeeecCCCcceeeeecc---------ceeEEEEecC-CCCcccceeeeccccC-CCceeEeeEEecCCCceEEE
Q psy11311 416 LPITILSVEANPCNEELLAVCGL---------KECIVFSFTS-GMSQATDSITINPHCE-TSNYIIKALWIPGRQSTLAI 484 (499)
Q Consensus 416 VpF~Vlsl~~NP~ne~~LAV~Gl---------keC~Vlti~~-~G~~v~d~l~i~l~l~-~~~fIik~~Wipgsq~~LAV 484 (499)
+.+.- .|+++|-. ++|.|+.. .+-.|..|+. .++ +..++.+.+... .|.+-..+.+=|... .|.|
T Consensus 49 ~g~~p-~i~~spdg-~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~-~~~~i~~~~~~~~~g~~p~~i~~spdg~-~l~v 124 (361)
T 2oiz_A 49 TAFNG-HVQVSNDG-KKIYTMTTYHERITRGKRSDVVEVWDADKLT-FEKEISLPPKRVQGLNYDGLFRQTTDGK-FIVL 124 (361)
T ss_dssp CCEEE-EEEECTTS-SEEEEEEEEETTSSSSCEEEEEEEEETTTCC-EEEEEEECTTBCCBCCCGGGEEECTTSS-EEEE
T ss_pred CCCCC-ceEECCCC-CEEEEEEecccccccCCCCCEEEEEECcCCc-EEEEEEcCccccccCCCcceEEECCCCC-EEEE
Confidence 33444 88999965 78888753 4556666665 356 777777754433 245555666666643 4444
Q ss_pred ee---cCceEEeecCC
Q psy11311 485 VT---ALNIKIYQLRP 497 (499)
Q Consensus 485 vT---~~fVKIYDLs~ 497 (499)
.. ...|.|||+..
T Consensus 125 ~n~~~~~~v~v~d~~~ 140 (361)
T 2oiz_A 125 QNASPATSIGIVDVAK 140 (361)
T ss_dssp EEESSSEEEEEEETTT
T ss_pred ECCCCCCeEEEEECCC
Confidence 42 35699999864
No 172
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=48.87 E-value=1.6e+02 Score=27.87 Aligned_cols=96 Identities=9% Similarity=0.175 Sum_probs=56.3
Q ss_pred EEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEecCCCCcccc
Q psy11311 377 LVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSFTSGMSQATD 455 (499)
Q Consensus 377 LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti~~~G~~v~d 455 (499)
++|+....|.|.|.++...-. ..+ +. .-.-.|.+|++ ++++||++|.. ...|..+.. |+ ...
T Consensus 145 ~l~~g~~dg~i~iwd~~~~~~-------~~~---~~--~h~~~v~~l~~---~~~~l~sg~~dg~i~vwd~~~-~~-~~~ 207 (435)
T 1p22_A 145 KIVSGLRDNTIKIWDKNTLEC-------KRI---LT--GHTGSVLCLQY---DERVIITGSSDSTVRVWDVNT-GE-MLN 207 (435)
T ss_dssp EEEEEESSSCEEEEESSSCCE-------EEE---EC--CCSSCEEEEEC---CSSEEEEEETTSCEEEEESSS-CC-EEE
T ss_pred EEEEEeCCCeEEEEeCCCCeE-------EEE---Ec--CCCCcEEEEEE---CCCEEEEEcCCCeEEEEECCC-Cc-EEE
Confidence 347767999999998743110 111 11 12335778888 46777777655 345555443 44 222
Q ss_pred eeeeccccCCCceeEeeEEecCCCceEEEe-ecCceEEeecCC
Q psy11311 456 SITINPHCETSNYIIKALWIPGRQSTLAIV-TALNIKIYQLRP 497 (499)
Q Consensus 456 ~l~i~l~l~~~~fIik~~Wipgsq~~LAVv-T~~fVKIYDLs~ 497 (499)
.+. .....|..+.|-++ .|+.. ....|+|||+..
T Consensus 208 ~~~-----~h~~~v~~l~~~~~---~l~s~s~dg~i~vwd~~~ 242 (435)
T 1p22_A 208 TLI-----HHCEAVLHLRFNNG---MMVTCSKDRSIAVWDMAS 242 (435)
T ss_dssp EEC-----CCCSCEEEEECCTT---EEEEEETTSCEEEEECSS
T ss_pred EEc-----CCCCcEEEEEEcCC---EEEEeeCCCcEEEEeCCC
Confidence 221 12567888888543 45444 446899999864
No 173
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=48.42 E-value=1.2e+02 Score=28.23 Aligned_cols=105 Identities=9% Similarity=-0.085 Sum_probs=55.8
Q ss_pred ceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecCCCCccc
Q psy11311 375 QHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTSGMSQAT 454 (499)
Q Consensus 375 q~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~~G~~v~ 454 (499)
.+|+++....+.|.+++....-. .-++ +..-..-.|+++|.+ .|-|+.-.+-.|..|+...-.+.
T Consensus 54 ~~lyv~~~~~~~v~viD~~t~~~-------~~~i------~~~~~p~~i~~~~~g--~lyv~~~~~~~v~~iD~~t~~~~ 118 (328)
T 3dsm_A 54 GIGWIVVNNSHVIFAIDINTFKE-------VGRI------TGFTSPRYIHFLSDE--KAYVTQIWDYRIFIINPKTYEIT 118 (328)
T ss_dssp TEEEEEEGGGTEEEEEETTTCCE-------EEEE------ECCSSEEEEEEEETT--EEEEEEBSCSEEEEEETTTTEEE
T ss_pred CEEEEEEcCCCEEEEEECcccEE-------EEEc------CCCCCCcEEEEeCCC--eEEEEECCCCeEEEEECCCCeEE
Confidence 45666666678999998743211 0111 122334567776654 56666634667778876433266
Q ss_pred ceeeeccccCCCceeEeeEEecCCCceEEEee---cCceEEeecCC
Q psy11311 455 DSITINPHCETSNYIIKALWIPGRQSTLAIVT---ALNIKIYQLRP 497 (499)
Q Consensus 455 d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT---~~fVKIYDLs~ 497 (499)
.++.+...-........+.+ .+ ..|.|+. ...|.+||+..
T Consensus 119 ~~i~~g~~~~~~~~p~~i~~-~~--~~lyv~~~~~~~~v~viD~~t 161 (328)
T 3dsm_A 119 GYIECPDMDMESGSTEQMVQ-YG--KYVYVNCWSYQNRILKIDTET 161 (328)
T ss_dssp EEEECTTCCTTTCBCCCEEE-ET--TEEEEEECTTCCEEEEEETTT
T ss_pred EEEEcCCccccCCCcceEEE-EC--CEEEEEcCCCCCEEEEEECCC
Confidence 66655431000012233333 44 3454443 56788888864
No 174
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=46.90 E-value=1.1e+02 Score=32.21 Aligned_cols=118 Identities=14% Similarity=0.241 Sum_probs=63.8
Q ss_pred eeeccCcccccceEEEEeecCCeEEEeehhhhccccccccccccccccc-------ccccceeEEEeeecCCCcceeeee
Q psy11311 364 MCILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLA-------SVSLPITILSVEANPCNEELLAVC 436 (499)
Q Consensus 364 mc~L~sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs-------~~~VpF~Vlsl~~NP~ne~~LAV~ 436 (499)
+|...+++-.|.+|++=..-.++|.|+++..- +||..+...- +.... .=-.+.+.|.. |.|+
T Consensus 85 ~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~-------p~~p~~~k~ie~~~~~~~~g~s-~Ph~~~~~pdG---i~Vs 153 (462)
T 2ece_A 85 LCPNGKPNIERRFLIVPGLRSSRIYIIDTKPN-------PREPKIIKVIEPEEVKKVSGYS-RLHTVHCGPDA---IYIS 153 (462)
T ss_dssp GSTTCCTTCCSCEEEEEBTTTCCEEEEECCSC-------TTSCEEEEEECHHHHHHHHCEE-EEEEEEECSSC---EEEE
T ss_pred cccccCCCccCCEEEEccCCCCeEEEEECCCC-------CCCceeeeeechhhcccccCCC-cccceeECCCe---EEEE
Confidence 34333433456777444444577999998522 1222221100 00110 11234444544 6666
Q ss_pred ccce------eEEEEecCC-CCcccceeeeccccCCCceeEeeEEecCCCceEEEeec---------------------C
Q psy11311 437 GLKE------CIVFSFTSG-MSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTA---------------------L 488 (499)
Q Consensus 437 Glke------C~Vlti~~~-G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~---------------------~ 488 (499)
-+.+ =-|+.|+.. ++ |..++.+...- ..|=-.+.|-|..+ .||+++ +
T Consensus 154 ~~g~~~g~~~g~v~vlD~~T~~-v~~~~~~~~~~--~~~~Yd~~~~p~~~--~mvsS~wg~p~~~~~g~~~~~~~~~~~d 228 (462)
T 2ece_A 154 ALGNEEGEGPGGILMLDHYSFE-PLGKWEIDRGD--QYLAYDFWWNLPNE--VLVSSEWAVPNTIEDGLKLEHLKDRYGN 228 (462)
T ss_dssp EEEETTSCSCCEEEEECTTTCC-EEEECCSBCTT--CCCCCCEEEETTTT--EEEECBCCCHHHHTTCCCTTTHHHHSCC
T ss_pred cCCCcCCCCCCeEEEEECCCCe-EEEEEccCCCC--ccccceEEECCCCC--EEEEccCcCccccccccchhhhhhccCC
Confidence 5555 568888865 66 77777654222 12222567777755 777884 8
Q ss_pred ceEEeecCC
Q psy11311 489 NIKIYQLRP 497 (499)
Q Consensus 489 fVKIYDLs~ 497 (499)
.|-+||+..
T Consensus 229 ~V~v~D~~~ 237 (462)
T 2ece_A 229 RIHFWDLRK 237 (462)
T ss_dssp EEEEEETTT
T ss_pred EEEEEECCC
Confidence 999999974
No 175
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=46.73 E-value=51 Score=30.15 Aligned_cols=75 Identities=12% Similarity=0.189 Sum_probs=47.6
Q ss_pred eeEEEeeecCCCcceeeeeccc-----eeEEEEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecC----
Q psy11311 418 ITILSVEANPCNEELLAVCGLK-----ECIVFSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTAL---- 488 (499)
Q Consensus 418 F~Vlsl~~NP~ne~~LAV~Glk-----eC~Vlti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~---- 488 (499)
..+..++++|.+.+.||.+.-. ...|..++..|. -... |.. -..+..+....|-|..+ .||.++.+
T Consensus 188 ~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~-~~~~--l~~-~~~~~~~~~~~~spdg~-~l~~~~~~~~~~ 262 (388)
T 3pe7_A 188 QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT-NMRK--VKT-HAEGESCTHEFWVPDGS-ALVYVSYLKGSP 262 (388)
T ss_dssp SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC-CCEE--SCC-CCTTEEEEEEEECTTSS-CEEEEEEETTCC
T ss_pred ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC-ceEE--eee-CCCCcccccceECCCCC-EEEEEecCCCCC
Confidence 3467888999666777776643 557777776665 1111 111 11235677889999866 57666653
Q ss_pred --ceEEeecCC
Q psy11311 489 --NIKIYQLRP 497 (499)
Q Consensus 489 --fVKIYDLs~ 497 (499)
.|.+||+..
T Consensus 263 ~~~l~~~d~~~ 273 (388)
T 3pe7_A 263 DRFIYSADPET 273 (388)
T ss_dssp CEEEEEECTTT
T ss_pred cceEEEEecCC
Confidence 288999864
No 176
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=46.19 E-value=53 Score=31.12 Aligned_cols=65 Identities=20% Similarity=0.210 Sum_probs=42.1
Q ss_pred EEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccce-----eEEEEecCC
Q psy11311 377 LVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKE-----CIVFSFTSG 449 (499)
Q Consensus 377 LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glke-----C~Vlti~~~ 449 (499)
++|++.+.|.|.|.++..- +..-++..+......-.|.+|+++|. ..+||+++-.. -.|+.|+.+
T Consensus 374 ~l~s~~~dg~v~iwd~~~~-------~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 374 FVITSSDDGTVKLWDLKTG-------EFIRNLVTLESGGSGGVVWRIRASNT-KLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEEEETTSEEEEEETTTC-------CEEEEEEECTTGGGTCEEEEEEECSS-EEEEEEECSSSSSCCEEEEEECCCC
T ss_pred EEEEEeCCCeEEEEECCCC-------ceeeeeeccccCCCCceEEEEEecCC-EEEEEEcccCCCCccEEEEEECCCC
Confidence 4477789999999998531 11122333344456678999999985 47888887664 445555543
No 177
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=43.91 E-value=65 Score=32.82 Aligned_cols=108 Identities=13% Similarity=0.081 Sum_probs=63.4
Q ss_pred CcccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc--------e
Q psy11311 369 SPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK--------E 440 (499)
Q Consensus 369 sp~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk--------e 440 (499)
||.| .+++.+ +.+.|-+.++..- ..+ ..+..-.. ..+.|.+++++|-. ++||.++-. +
T Consensus 24 s~dg---~~~~~~-~d~~i~~~~~~~g------~~~-~~~~~~~~--~~~~~~~~~~SpDg-~~la~~~~~~~~~~~s~~ 89 (719)
T 1z68_A 24 ISGQ---EYLHQS-ADNNIVLYNIETG------QSY-TILSNRTM--KSVNASNYGLSPDR-QFVYLESDYSKLWRYSYT 89 (719)
T ss_dssp SSSS---EEEEEC-TTSCEEEEESSSC------CEE-EEECHHHH--HTTTCSEEEECTTS-SEEEEEEEEEECSSSCEE
T ss_pred CCCC---eEEEEc-CCCCEEEEEcCCC------cEE-EEEccccc--cccceeeEEECCCC-CeEEEEecCceeEEeecc
Confidence 6666 354554 6677887776321 010 11110000 01346788999965 778877652 4
Q ss_pred eEEEEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecCceEEeecCC
Q psy11311 441 CIVFSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLRP 497 (499)
Q Consensus 441 C~Vlti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~ 497 (499)
..|...+-.+........+ ...+..+.|=|..+ .||.+....|+|||+..
T Consensus 90 ~~i~~~d~~~g~~~~~~~l------~~~~~~~~~SPDG~-~la~~~~~~i~~~~~~~ 139 (719)
T 1z68_A 90 ATYYIYDLSNGEFVRGNEL------PRPIQYLCWSPVGS-KLAYVYQNNIYLKQRPG 139 (719)
T ss_dssp EEEEEEETTTTEECCSSCC------CSSBCCEEECSSTT-CEEEEETTEEEEESSTT
T ss_pred eEEEEEECCCCccccceec------CcccccceECCCCC-EEEEEECCeEEEEeCCC
Confidence 6777776544312100111 13467799999977 69999999999999853
No 178
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=42.71 E-value=1.9e+02 Score=26.54 Aligned_cols=99 Identities=17% Similarity=0.061 Sum_probs=55.0
Q ss_pred ceEEEEeecCCeEEEeeh--hhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecCCCCc
Q psy11311 375 QHLVAVSHEKGKITLLQL--SGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTSGMSQ 452 (499)
Q Consensus 375 q~LvAVshEk~KVtllql--s~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~~G~~ 452 (499)
.++|++..+.+.|.+++. ++++-+. .... +-.+-++.+-|. .++|+ ++ +-.|+.++.+|+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~-------~~~~------~~~~~~~~~~pd-G~ilv-s~--~~~V~~~d~~G~- 66 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEY-------PLEK------GWECNSVAATKA-GEILF-SY--SKGAKMITRDGR- 66 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEE-------ECCT------TCCCCEEEECTT-SCEEE-EC--BSEEEEECTTSC-
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEe-------CCCc------cCCCcCeEECCC-CCEEE-eC--CCCEEEECCCCC-
Confidence 346677678899998886 2233221 1100 012334455553 45666 54 345888999998
Q ss_pred ccceeeeccccCCCceeEeeEEecCCCceEEEeecC-ceEEeecCC
Q psy11311 453 ATDSITINPHCETSNYIIKALWIPGRQSTLAIVTAL-NIKIYQLRP 497 (499)
Q Consensus 453 v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~-fVKIYDLs~ 497 (499)
+.=++.. ..+..+..+.++|..+ +.|+... ..+||-+..
T Consensus 67 ~~W~~~~----~~~~~~~~~~~~~dG~--~lv~~~~~~~~v~~vd~ 106 (276)
T 3no2_A 67 ELWNIAA----PAGCEMQTARILPDGN--ALVAWCGHPSTILEVNM 106 (276)
T ss_dssp EEEEEEC----CTTCEEEEEEECTTSC--EEEEEESTTEEEEEECT
T ss_pred EEEEEcC----CCCccccccEECCCCC--EEEEecCCCCEEEEEeC
Confidence 4444433 2345677788888755 4444444 556665443
No 179
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=42.21 E-value=1.9e+02 Score=25.90 Aligned_cols=65 Identities=17% Similarity=0.298 Sum_probs=39.7
Q ss_pred EEEeeecCCCcceeeeeccc--------------------------eeEEEEecCCCCcccceeeeccccCCCceeEeeE
Q psy11311 420 ILSVEANPCNEELLAVCGLK--------------------------ECIVFSFTSGMSQATDSITINPHCETSNYIIKAL 473 (499)
Q Consensus 420 Vlsl~~NP~ne~~LAV~Glk--------------------------eC~Vlti~~~G~~v~d~l~i~l~l~~~~fIik~~ 473 (499)
|.+++++|-. +.||+...+ ..+|+.++-.+......+. . . .+..+.
T Consensus 106 ~~~~~wspdg-~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~--~----~-~~~~~~ 177 (347)
T 2gop_A 106 IRSLEWNEDS-RKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFE--K----P-RFSSGI 177 (347)
T ss_dssp EEEEEECTTS-SEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEE--E----E-TTCEEE
T ss_pred ccceeECCCC-CEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeec--C----C-Cccccc
Confidence 7889999966 667776532 4677777764431212222 2 1 567789
Q ss_pred EecCCCceEEEeecC---------ceEEeec
Q psy11311 474 WIPGRQSTLAIVTAL---------NIKIYQL 495 (499)
Q Consensus 474 Wipgsq~~LAVvT~~---------fVKIYDL 495 (499)
|-|.. |+++++. ..+||.+
T Consensus 178 ~spdg---~~~~~~~~~~~~~~~~~~~l~~~ 205 (347)
T 2gop_A 178 WHRDK---IVVNVPHREIIPQYFKFWDIYIW 205 (347)
T ss_dssp EETTE---EEEEEECCCSSCCSSCCEEEEEE
T ss_pred CCCCe---EEEEEecccccccccccccEEEe
Confidence 99985 5555532 4567654
No 180
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=40.96 E-value=35 Score=32.61 Aligned_cols=85 Identities=14% Similarity=0.085 Sum_probs=55.5
Q ss_pred ccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecCCCCc
Q psy11311 373 KRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTSGMSQ 452 (499)
Q Consensus 373 ~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~~G~~ 452 (499)
++++|+++ .|++..+|+.+..++...+.+. +.-+.+....--+.+-+|+++|...+++++.. +.=.++.++.+|.
T Consensus 131 ~~~~L~va-~E~~p~~i~~~~g~~~~~~l~i--~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~-~s~~L~~~d~~g~- 205 (255)
T 3qqz_A 131 QDHTFWFF-KEKNPIEVYKVNGLLSSNELHI--SKDKALQRQFTLDDVSGAEFNQQKNTLLVLSH-ESRALQEVTLVGE- 205 (255)
T ss_dssp TTTEEEEE-EESSSEEEEEEESTTCSSCCEE--EECHHHHHTCCSSCCCEEEEETTTTEEEEEET-TTTEEEEECTTCC-
T ss_pred CCCEEEEE-ECcCCceEEEEcccccCCceee--ecchhhccccccCCceeEEEcCCCCeEEEEEC-CCCeEEEEcCCCC-
Confidence 45678665 6999999999986554211111 00000111111245689999999977777755 6677888999999
Q ss_pred ccceeeeccc
Q psy11311 453 ATDSITINPH 462 (499)
Q Consensus 453 v~d~l~i~l~ 462 (499)
|...+.|...
T Consensus 206 ~~~~~~L~~g 215 (255)
T 3qqz_A 206 VIGEMSLTKG 215 (255)
T ss_dssp EEEEEECSTT
T ss_pred EEEEEEcCCc
Confidence 9999988854
No 181
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=40.86 E-value=1.9e+02 Score=26.76 Aligned_cols=101 Identities=7% Similarity=0.032 Sum_probs=55.0
Q ss_pred ceEEEEee-cCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccce----------eEE
Q psy11311 375 QHLVAVSH-EKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKE----------CIV 443 (499)
Q Consensus 375 q~LvAVsh-Ek~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glke----------C~V 443 (499)
++|++... ..+.|.++++...-- .+++ .++...-.|++.|.. ++++++ ..+ -.|
T Consensus 141 ~~lyv~~~~~~~~v~viD~~t~~~-----~~~i--------~~g~~p~~i~~~~dG-~l~v~~-~~~~~~~~~~~~~~~v 205 (328)
T 3dsm_A 141 KYVYVNCWSYQNRILKIDTETDKV-----VDEL--------TIGIQPTSLVMDKYN-KMWTIT-DGGYEGSPYGYEAPSL 205 (328)
T ss_dssp TEEEEEECTTCCEEEEEETTTTEE-----EEEE--------ECSSCBCCCEECTTS-EEEEEB-CCBCTTCSSCBCCCEE
T ss_pred CEEEEEcCCCCCEEEEEECCCCeE-----EEEE--------EcCCCccceEEcCCC-CEEEEE-CCCccCCccccCCceE
Confidence 45644433 378899998753110 0111 112222467777755 344443 333 688
Q ss_pred EEecCC-CCcccceeeeccccCCCceeEeeEEecCCCceEEEeecCceEEeecCC
Q psy11311 444 FSFTSG-MSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLRP 497 (499)
Q Consensus 444 lti~~~-G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~ 497 (499)
..|+.. |+ +...+.+. .|.....+.|-|... .+.+++..|.+||+..
T Consensus 206 ~~id~~t~~-v~~~~~~~----~g~~p~~la~~~d~~--~lyv~~~~v~~~d~~t 253 (328)
T 3dsm_A 206 YRIDAETFT-VEKQFKFK----LGDWPSEVQLNGTRD--TLYWINNDIWRMPVEA 253 (328)
T ss_dssp EEEETTTTE-EEEEEECC----TTCCCEEEEECTTSC--EEEEESSSEEEEETTC
T ss_pred EEEECCCCe-EEEEEecC----CCCCceeEEEecCCC--EEEEEccEEEEEECCC
Confidence 888875 55 66555432 244566677777433 3445556888888753
No 182
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=40.67 E-value=11 Score=30.24 Aligned_cols=28 Identities=21% Similarity=0.432 Sum_probs=23.2
Q ss_pred ceeeccCCCCCCCceeehhhhh-hhcCCCeEEE
Q psy11311 77 HWYHCHTCKMIDGVGVCSVCAQ-VCHKNHDITY 108 (499)
Q Consensus 77 ~~Y~C~TC~~~~~~gIC~aCA~-vCH~GHdLvy 108 (499)
.-|.|.+|. ..||..|.. .-|+||.++.
T Consensus 70 l~~fC~~~~----~~iC~~C~~~~~H~~H~~~~ 98 (101)
T 2jun_A 70 VNMYCVTDD----QLICALCKLVGRHRDHQVAA 98 (101)
T ss_dssp CCEEETTTT----EEECHHHHHHTTTSSSCBCC
T ss_pred ceEECCCCC----CccchhcCCCCCcCCCCeec
Confidence 467898886 689999997 7999999753
No 183
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=40.21 E-value=2.2e+02 Score=31.07 Aligned_cols=102 Identities=10% Similarity=0.035 Sum_probs=62.0
Q ss_pred C-cccccceEEEEeecCCeEEEeehhhhcccccccccccccccccccccce-eEEEeeecCCCcceeeeeccceeEEE-E
Q psy11311 369 S-PQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPI-TILSVEANPCNEELLAVCGLKECIVF-S 445 (499)
Q Consensus 369 s-p~g~rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF-~Vlsl~~NP~ne~~LAV~GlkeC~Vl-t 445 (499)
| |.|+ +| |++. .+.|.++++.. ... .++. ..+- .|.+++++ +.+.|++++- +-+|. .
T Consensus 304 S~pdG~--~l-a~~~-~~~i~~~~~~~------~~~-----~~~~--~~~~~~~~~~~~s--dg~~l~~~s~-~~~l~~~ 363 (1045)
T 1k32_A 304 SPLDGD--LI-AFVS-RGQAFIQDVSG------TYV-----LKVP--EPLRIRYVRRGGD--TKVAFIHGTR-EGDFLGI 363 (1045)
T ss_dssp EECGGG--CE-EEEE-TTEEEEECTTS------SBE-----EECS--CCSCEEEEEECSS--SEEEEEEEET-TEEEEEE
T ss_pred cCCCCC--EE-EEEE-cCEEEEEcCCC------Cce-----EEcc--CCCcceEEeeeEc--CCCeEEEEEC-CCceEEE
Confidence 6 7764 35 5543 67787777632 111 1111 1122 57788888 6678887776 55676 5
Q ss_pred ecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecC-ceEEeecCC
Q psy11311 446 FTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTAL-NIKIYQLRP 497 (499)
Q Consensus 446 i~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~-fVKIYDLs~ 497 (499)
++..+. - ...+. .....+..+.|-|..+ .||...++ .|++||+..
T Consensus 364 ~d~~~~-~----~~~l~-~~~~~~~~~~~SpDG~-~la~~~~~~~v~~~d~~t 409 (1045)
T 1k32_A 364 YDYRTG-K----AEKFE-ENLGNVFAMGVDRNGK-FAVVANDRFEIMTVDLET 409 (1045)
T ss_dssp EETTTC-C----EEECC-CCCCSEEEEEECTTSS-EEEEEETTSEEEEEETTT
T ss_pred EECCCC-C----ceEec-CCccceeeeEECCCCC-EEEEECCCCeEEEEECCC
Confidence 665444 1 11222 3356788999999876 57766665 799999864
No 184
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=38.62 E-value=73 Score=32.16 Aligned_cols=54 Identities=11% Similarity=0.055 Sum_probs=30.1
Q ss_pred EEEeeecCCCcceeeeeccceeEEEEecCCCCcc--cceeeeccccC----CCceeEeeEEecC
Q psy11311 420 ILSVEANPCNEELLAVCGLKECIVFSFTSGMSQA--TDSITINPHCE----TSNYIIKALWIPG 477 (499)
Q Consensus 420 Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~~G~~v--~d~l~i~l~l~----~~~fIik~~Wipg 477 (499)
|-+++.+|-. .+.|.++..|..+.++|.++ -..|..=|.++ .+..+.-+.|++.
T Consensus 165 Vs~v~WSpkG----~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~ 224 (388)
T 1xip_A 165 VTSFDVTNSQ----LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSP 224 (388)
T ss_dssp EEEEEECSSE----EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSS
T ss_pred ceEEEEcCCc----eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecC
Confidence 4455555555 23466666555555555522 22233333333 3688999999975
No 185
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=38.49 E-value=1.1e+02 Score=31.04 Aligned_cols=60 Identities=17% Similarity=0.088 Sum_probs=33.3
Q ss_pred EEEeeecCCCcceeeeeccceeEEEEecCCCCcccceeeeccccCC-Cce-----------------eEeeEEecCCCce
Q psy11311 420 ILSVEANPCNEELLAVCGLKECIVFSFTSGMSQATDSITINPHCET-SNY-----------------IIKALWIPGRQST 481 (499)
Q Consensus 420 Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~~G~~v~d~l~i~l~l~~-~~f-----------------Iik~~Wipgsq~~ 481 (499)
|.+++++|-. ++||.+.- -.|...+-.+... ..+ .... ... ...+.|-|..+ .
T Consensus 112 ~~~~~~SPDG-~~la~~~~--~~i~~~~~~~g~~---~~l--~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~-~ 182 (719)
T 1z68_A 112 IQYLCWSPVG-SKLAYVYQ--NNIYLKQRPGDPP---FQI--TFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGK-F 182 (719)
T ss_dssp BCCEEECSST-TCEEEEET--TEEEEESSTTSCC---EEC--CCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSS-E
T ss_pred cccceECCCC-CEEEEEEC--CeEEEEeCCCCCc---EEE--ecCCCcCCeEcccccceeeeecccCcccEEECCCCC-E
Confidence 6678999976 56777643 3555555433201 111 1111 111 14789999977 6
Q ss_pred EEEeecC
Q psy11311 482 LAIVTAL 488 (499)
Q Consensus 482 LAVvT~~ 488 (499)
||....+
T Consensus 183 la~~~~d 189 (719)
T 1z68_A 183 LAYAEFN 189 (719)
T ss_dssp EEEEEEE
T ss_pred EEEEEEC
Confidence 7776644
No 186
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=37.31 E-value=2e+02 Score=29.15 Aligned_cols=107 Identities=15% Similarity=0.113 Sum_probs=50.9
Q ss_pred CcccccceEEEEeec--CCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCC-CcceeeeeccceeEEEE
Q psy11311 369 SPQSKRQHLVAVSHE--KGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPC-NEELLAVCGLKECIVFS 445 (499)
Q Consensus 369 sp~g~rq~LvAVshE--k~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~-ne~~LAV~GlkeC~Vlt 445 (499)
||.||+ | .|+.+ .+.|+|+++... +.+...++|... ..+ |. ...|+++|+=-.=.+++
T Consensus 145 spDGk~--l-yVan~~~~~~VsVID~~t~-------------~vv~tI~v~g~~--~~~-P~g~~~~~~~~~DG~~~~v~ 205 (386)
T 3sjl_D 145 TPDGKT--L-LFYQFSPAPAVGVVDLEGK-------------AFKRMLDVPDCY--HIF-PTAPDTFFMHCRDGSLAKVA 205 (386)
T ss_dssp CTTSSE--E-EEEECSSSCEEEEEETTTT-------------EEEEEEECCSEE--EEE-EEETTEEEEEETTSCEEEEE
T ss_pred cCCCCE--E-EEEEcCCCCeEEEEECCCC-------------cEEEEEECCCcc--eee-cCCCceeEEECCCCCEEEEE
Confidence 787753 5 55554 589999998543 222233444321 112 32 34566777755544555
Q ss_pred ecCCCCcccceeeeccc-cCCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 446 FTSGMSQATDSITINPH-CETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 446 i~~~G~~v~d~l~i~l~-l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
+...|. |.+... .+. .+..-..+...|.+... .++.+| ...|-++|++.
T Consensus 206 ~~~~g~-v~~~~~-~~~~~~~~~~~~~~~~~~~dG-~~~~vs~~g~V~v~d~~~ 256 (386)
T 3sjl_D 206 FGTEGT-PEITHT-EVFHPEDEFLINHPAYSQKAG-RLVWPTYTGKIHQIDLSS 256 (386)
T ss_dssp CCSSSC-CEEEEC-CCCSCTTSCBCSCCEEETTTT-EEEEEBTTSEEEEEECTT
T ss_pred CCCCCe-EEEeec-ceeccccccccccceeEcCCC-cEEEEeCCCEEEEEECCC
Confidence 555566 544221 111 11122223356663222 333333 34566666643
No 187
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=36.55 E-value=1.5e+02 Score=30.17 Aligned_cols=56 Identities=21% Similarity=0.260 Sum_probs=38.9
Q ss_pred cceeEEEEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEee-cCceEEeecCC
Q psy11311 438 LKECIVFSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT-ALNIKIYQLRP 497 (499)
Q Consensus 438 lkeC~Vlti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT-~~fVKIYDLs~ 497 (499)
=+...++.|+++|. +...+.++.. ...|..+-=++|.+..||=.. ...|||||+..
T Consensus 156 d~~V~~~~~s~dG~-~~~s~~~~~~---~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~T 212 (356)
T 2w18_A 156 DQQVEVMTFAEDGG-GKENQFLMPP---EETILTFAEVQGMQEALLGTTIMNNIVIWNLKT 212 (356)
T ss_dssp TCEEEEEEECTTSC-EEEEEEECCC---SSCEEEEEEEETSTTEEEEEETTSEEEEEETTT
T ss_pred CCcEEEEEECCCCc-eeeeeccCCC---ceeeEEeeccCCCCceEEEecCCCcEEEEECCC
Confidence 45778888888888 5555555443 345666676778887665433 67899999974
No 188
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=36.55 E-value=2.5e+02 Score=25.71 Aligned_cols=76 Identities=9% Similarity=0.089 Sum_probs=43.8
Q ss_pred eEEEeeecCCCcceeeeeccceeEEEEecCCCCcccceeeecccc-----CCCceeEeeEEecCCCceEEEe--ecCceE
Q psy11311 419 TILSVEANPCNEELLAVCGLKECIVFSFTSGMSQATDSITINPHC-----ETSNYIIKALWIPGRQSTLAIV--TALNIK 491 (499)
Q Consensus 419 ~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~~G~~v~d~l~i~l~l-----~~~~fIik~~Wipgsq~~LAVv--T~~fVK 491 (499)
....|++.|.+.++++..++.+..|..++.+|. +.-.+.-.-.- ..-.+...+.+=|.. ..|.|+ .+.-|+
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~-~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~-g~l~v~d~~~~~I~ 221 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK-FVTQWGEESSGSSPRPGQFSVPHSLALVPHL-DQLCVADRENGRIQ 221 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSSCCEEEEECTTSC-EEEEECEECCSSSCCTTEESCEEEEEEETTT-TEEEEEETTTTEEE
T ss_pred CCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC-EEEEeccCCCCCCCCCcccCCCcEEEEECCC-CEEEEEECCCCEEE
Confidence 356899999665555444478889999999998 44333221110 001234445444531 234443 456689
Q ss_pred EeecC
Q psy11311 492 IYQLR 496 (499)
Q Consensus 492 IYDLs 496 (499)
+||+.
T Consensus 222 ~~~~~ 226 (329)
T 3fvz_A 222 CFKTD 226 (329)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 99875
No 189
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=32.81 E-value=2.7e+02 Score=24.89 Aligned_cols=102 Identities=15% Similarity=0.104 Sum_probs=57.7
Q ss_pred eEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccce----eEEEEecCCCC
Q psy11311 376 HLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKE----CIVFSFTSGMS 451 (499)
Q Consensus 376 ~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glke----C~Vlti~~~G~ 451 (499)
+|+++..+++.|.++++.. ...+.+. . ..+..|.+|++.|.. .|.|++..+ -.|+.++.++.
T Consensus 57 ~l~~~~~~~~~i~~~d~~~------~~~~~~~--~----~~~~~~~~i~~~~dg--~l~v~~~~~~~~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 57 QLFLLDVFEGNIFKINPET------KEIKRPF--V----SHKANPAAIKIHKDG--RLFVCYLGDFKSTGGIFAATENGD 122 (333)
T ss_dssp CEEEEETTTCEEEEECTTT------CCEEEEE--E----CSSSSEEEEEECTTS--CEEEEECTTSSSCCEEEEECTTSC
T ss_pred CEEEEECCCCEEEEEeCCC------CcEEEEe--e----CCCCCcceEEECCCC--cEEEEeCCCCCCCceEEEEeCCCC
Confidence 3645545677888887631 0001111 0 123457889998876 355555554 67888887776
Q ss_pred cccceeeeccccCCCceeEeeEEecCCCceEEEeecC------ceEEeecC
Q psy11311 452 QATDSITINPHCETSNYIIKALWIPGRQSTLAIVTAL------NIKIYQLR 496 (499)
Q Consensus 452 ~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~------fVKIYDLs 496 (499)
...++ +. ....+..+..+.|-|. ..|.|++.. ..+||.+.
T Consensus 123 -~~~~~-~~-~~~~~~~~~~i~~d~~--g~l~v~~~~~~~~~~~~~l~~~~ 168 (333)
T 2dg1_A 123 -NLQDI-IE-DLSTAYCIDDMVFDSK--GGFYFTDFRGYSTNPLGGVYYVS 168 (333)
T ss_dssp -SCEEE-EC-SSSSCCCEEEEEECTT--SCEEEEECCCBTTBCCEEEEEEC
T ss_pred -EEEEE-Ec-cCccCCcccceEECCC--CCEEEEeccccccCCCceEEEEe
Confidence 22222 11 1224677888888876 356666653 35666554
No 190
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=30.89 E-value=3.2e+02 Score=28.18 Aligned_cols=75 Identities=8% Similarity=0.001 Sum_probs=46.3
Q ss_pred EEEeeecCCCcceeeeeccce---------------eEEEEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEE
Q psy11311 420 ILSVEANPCNEELLAVCGLKE---------------CIVFSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAI 484 (499)
Q Consensus 420 Vlsl~~NP~ne~~LAV~Glke---------------C~Vlti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAV 484 (499)
+-+++++|-+ +.|++..... .+|....-.+.+..|++..+..-. ..|+..+.|-|..+ .|++
T Consensus 173 ~~~~~wspDg-~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~-~~~~~~~~~SpDg~-~l~~ 249 (710)
T 2xdw_A 173 FSCMAWTHDG-KGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDE-PKWMGGAELSDDGR-YVLL 249 (710)
T ss_dssp SCCEEECTTS-SEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTC-TTCEEEEEECTTSC-EEEE
T ss_pred cceEEEEeCC-CEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCC-CeEEEEEEEcCCCC-EEEE
Confidence 3467888865 6677765542 345555443332555665544322 45777899999876 6777
Q ss_pred ee------cCceEEeecCC
Q psy11311 485 VT------ALNIKIYQLRP 497 (499)
Q Consensus 485 vT------~~fVKIYDLs~ 497 (499)
+. +..|.++|+..
T Consensus 250 ~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 250 SIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp EEECSSSSCCEEEEEEGGG
T ss_pred EEEccCCCccEEEEEECcc
Confidence 65 34688888853
No 191
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=28.90 E-value=2.2e+02 Score=26.14 Aligned_cols=106 Identities=11% Similarity=0.129 Sum_probs=55.5
Q ss_pred ceEEEEeecCCeEEEeehh--hhcccccccccccccccccccccceeEEEeeecCCCcce------eeeeccceeEEEEe
Q psy11311 375 QHLVAVSHEKGKITLLQLS--GLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEEL------LAVCGLKECIVFSF 446 (499)
Q Consensus 375 q~LvAVshEk~KVtllqls--~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~------LAV~GlkeC~Vlti 446 (499)
++|++.....++|.++++. .++.. +......-.+.++++.| .-. +.|++...-.|+.+
T Consensus 208 g~l~v~d~~~~~I~~~~~~~G~~~~~------------~~~~~~~~~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~ 273 (329)
T 3fvz_A 208 DQLCVADRENGRIQCFKTDTKEFVRE------------IKHASFGRNVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVM 273 (329)
T ss_dssp TEEEEEETTTTEEEEEETTTCCEEEE------------ECCTTTTTCEEEEEEET--TEEEEEECCCCTTCSCCCCEEEE
T ss_pred CEEEEEECCCCEEEEEECCCCcEEEE------------EeccccCCCcceeeecC--CEEEEeCCCEEeccCCCcEEEEE
Confidence 4565554567789999873 33322 11111222344667777 122 33444555677777
Q ss_pred c-CCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecCceEEeecCC
Q psy11311 447 T-SGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLRP 497 (499)
Q Consensus 447 ~-~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~ 497 (499)
+ ..|+ +...+. +......+...+.+=|..+.+++=..+..|++||+..
T Consensus 274 ~~~~g~-~~~~~~--~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 274 NFSSGE-IIDVFK--PVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp ETTTCC-EEEEEC--CSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EcCCCe-EEEEEc--CCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 7 5676 444332 1111234555666655543333334477899999753
No 192
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=28.87 E-value=2.9e+02 Score=24.10 Aligned_cols=106 Identities=8% Similarity=0.002 Sum_probs=55.5
Q ss_pred eEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccc-eeEEEEecCCCCccc
Q psy11311 376 HLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLK-ECIVFSFTSGMSQAT 454 (499)
Q Consensus 376 ~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glk-eC~Vlti~~~G~~v~ 454 (499)
+|++.....+.|.+++...=. .+.+.... ....-...+..|++.+.+ ..|.|++.. +-.|..++.+|. +.
T Consensus 42 ~l~v~~~~~~~i~~~d~~g~~------~~~~~~~~-~~~~~~~~p~~i~~~~~~-g~l~v~~~~~~~~i~~~d~~g~-~~ 112 (286)
T 1q7f_A 42 DIIVADTNNHRIQIFDKEGRF------KFQFGECG-KRDSQLLYPNRVAVVRNS-GDIIVTERSPTHQIQIYNQYGQ-FV 112 (286)
T ss_dssp CEEEEEGGGTEEEEECTTSCE------EEEECCBS-SSTTCBSSEEEEEEETTT-TEEEEEECGGGCEEEEECTTSC-EE
T ss_pred CEEEEECCCCEEEEECCCCcE------EEEecccC-CCcccccCceEEEEEcCC-CeEEEEcCCCCCEEEEECCCCc-EE
Confidence 464554567889988753210 00110000 000111235677775434 356666653 778888998888 44
Q ss_pred ceeeeccccCCCceeEeeEEecCCCceEEEee--cCceEEeecC
Q psy11311 455 DSITINPHCETSNYIIKALWIPGRQSTLAIVT--ALNIKIYQLR 496 (499)
Q Consensus 455 d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT--~~fVKIYDLs 496 (499)
..+. ......+..+.+-|.. .|.|+. +..|.+||..
T Consensus 113 ~~~~----~~~~~~~~~i~~~~~g--~l~v~~~~~~~i~~~~~~ 150 (286)
T 1q7f_A 113 RKFG----ATILQHPRGVTVDNKG--RIIVVECKVMRVIIFDQN 150 (286)
T ss_dssp EEEC----TTTCSCEEEEEECTTS--CEEEEETTTTEEEEECTT
T ss_pred EEec----CccCCCceEEEEeCCC--CEEEEECCCCEEEEEcCC
Confidence 3331 1223456666666653 355543 4568888854
No 193
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=28.60 E-value=1.4e+02 Score=27.09 Aligned_cols=76 Identities=13% Similarity=0.164 Sum_probs=45.2
Q ss_pred ceeEEEeeecCCCcceeeeeccce-----eEEEEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeecC---
Q psy11311 417 PITILSVEANPCNEELLAVCGLKE-----CIVFSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTAL--- 488 (499)
Q Consensus 417 pF~Vlsl~~NP~ne~~LAV~Glke-----C~Vlti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~--- 488 (499)
+..+-+++++|.+...||++.-.. ..|..++..|. -. ..+.. -..+..+..+.|-|..+ .|+.++++
T Consensus 187 ~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~-~~--~~l~~-~~~~~~~~~~~~spdg~-~l~~~~~~~~~ 261 (396)
T 3c5m_A 187 TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS-NV--RKIKE-HAEGESCTHEFWIPDGS-AMAYVSYFKGQ 261 (396)
T ss_dssp SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC-CC--EESSC-CCTTEEEEEEEECTTSS-CEEEEEEETTT
T ss_pred CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCC-ce--eEeec-cCCCccccceEECCCCC-EEEEEecCCCC
Confidence 345678889996666666654221 56777766554 11 11111 11144677889999865 46666543
Q ss_pred ---ceEEeecCC
Q psy11311 489 ---NIKIYQLRP 497 (499)
Q Consensus 489 ---fVKIYDLs~ 497 (499)
.|.+||+..
T Consensus 262 ~~~~l~~~d~~~ 273 (396)
T 3c5m_A 262 TDRVIYKANPET 273 (396)
T ss_dssp CCEEEEEECTTT
T ss_pred ccceEEEEECCC
Confidence 399999854
No 194
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=27.19 E-value=3.1e+02 Score=27.85 Aligned_cols=111 Identities=12% Similarity=0.082 Sum_probs=60.5
Q ss_pred ccCcccccceEEEEeecC-----CeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeecc---
Q psy11311 367 LSSPQSKRQHLVAVSHEK-----GKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGL--- 438 (499)
Q Consensus 367 L~sp~g~rq~LvAVshEk-----~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Gl--- 438 (499)
|..|+++ ++ .|+.++ +.|+++++.. .+.+...+++..= .|+++|-. ++|.|+-.
T Consensus 79 ~p~~~~~--~v-yV~n~~~~~~~~~VsVID~~t-------------~~vv~~I~vG~~P-gia~SpDg-k~lyVan~~~~ 140 (426)
T 3c75_H 79 APAPDAR--RV-YIQDPAHFAAITQQFVIDGST-------------GRILGMTDGGFLP-HPVAAEDG-SFFAQASTVFE 140 (426)
T ss_dssp CCCCCTT--EE-EEEECTTTCSSEEEEEEETTT-------------TEEEEEEEECSSC-EEEECTTS-SCEEEEEEEEE
T ss_pred cCCCCCC--EE-EEECCCcCCCCCeEEEEECCC-------------CEEEEEEECCCCC-ceEECCCC-CEEEEEecccc
Confidence 5555553 35 565565 5999999732 2334444444444 89999976 67777753
Q ss_pred ------ceeEEEEecC-CCCcccceeeec-c-ccCCCceeEeeEEecCCCceEEEee---cCceEEeecCC
Q psy11311 439 ------KECIVFSFTS-GMSQATDSITIN-P-HCETSNYIIKALWIPGRQSTLAIVT---ALNIKIYQLRP 497 (499)
Q Consensus 439 ------keC~Vlti~~-~G~~v~d~l~i~-l-~l~~~~fIik~~Wipgsq~~LAVvT---~~fVKIYDLs~ 497 (499)
++=.|..|+. .++ +..++.+. + ....|.+-..+.+=|... +|.|.. ...|-|+|+..
T Consensus 141 ~~~~G~~~~~VsviD~~t~~-vv~~I~v~g~~r~~~g~~P~~~~~spDGk-~lyV~n~~~~~~VsVID~~t 209 (426)
T 3c75_H 141 RIARGKRTDYVEVFDPVTFL-PIADIELPDAPRFLVGTYQWMNALTPDNK-NLLFYQFSPAPAVGVVDLEG 209 (426)
T ss_dssp ETTEEEEEEEEEEECTTTCC-EEEEEEETTCCCCCBSCCGGGSEECTTSS-EEEEEECSSSCEEEEEETTT
T ss_pred ccccCCCCCEEEEEECCCCc-EEEEEECCCccccccCCCcceEEEcCCCC-EEEEEecCCCCeEEEEECCC
Confidence 3445666765 455 77777764 1 111123333344445432 233321 23577777654
No 195
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=26.97 E-value=3.9e+02 Score=25.83 Aligned_cols=110 Identities=11% Similarity=0.075 Sum_probs=62.5
Q ss_pred ccCcccccceEEEEeec-CC----eEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeecc---
Q psy11311 367 LSSPQSKRQHLVAVSHE-KG----KITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGL--- 438 (499)
Q Consensus 367 L~sp~g~rq~LvAVshE-k~----KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Gl--- 438 (499)
+.+|.++ .+ -|+.+ +. .|+++++... +.+...++.+.= .|+++|-. ++|.|+..
T Consensus 27 ~~~~~~~--~~-yv~~~~~~~~~~~v~v~D~~t~-------------~~~~~i~~g~~p-~i~~spDg-~~lyv~n~~~~ 88 (373)
T 2mad_H 27 APGADGR--RS-YINLPAHHSAIIQQWVLDAGSG-------------SILGHVNGGFLP-NPVAAHSG-SEFALASTSFS 88 (373)
T ss_pred cCCCCCC--EE-EEeCCcccCCccEEEEEECCCC-------------eEEEEecCCCCC-CeEECCCC-CEEEEEecccc
Confidence 4456553 24 44443 33 7788887421 122334444544 88899866 77888752
Q ss_pred ------ceeEEEEecC-CCCcccceeeec--cccCCCceeEeeEEecCCCceEEEee---cCceEEeecCC
Q psy11311 439 ------KECIVFSFTS-GMSQATDSITIN--PHCETSNYIIKALWIPGRQSTLAIVT---ALNIKIYQLRP 497 (499)
Q Consensus 439 ------keC~Vlti~~-~G~~v~d~l~i~--l~l~~~~fIik~~Wipgsq~~LAVvT---~~fVKIYDLs~ 497 (499)
++=.|..|+. .++ +..++.+. .....+.+-..+.|-|..+ +|.|+. +..|-++| ..
T Consensus 89 ~~~rg~~~~~v~viD~~t~~-~~~~i~~~~~~~~~~g~~p~~~~~spDG~-~l~v~n~~~~~~v~viD-~t 156 (373)
T 2mad_H 89 RIAKGKRTDYVEVFDPVTFL-PIADIELPDAPRFDVGPYSWMNANTPNNA-DLLFFQFAAGPAVGLVV-QG 156 (373)
T ss_pred ccccCCCCCeEEEEECCCCc-EEEEEECCCccccccCCCccceEECCCCC-EEEEEecCCCCeEEEEE-CC
Confidence 3444555554 456 77777664 2222345556778888754 455443 24588888 53
No 196
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=26.89 E-value=2.2e+02 Score=25.54 Aligned_cols=59 Identities=15% Similarity=0.116 Sum_probs=36.4
Q ss_pred eEEEeeecCCCcceeeeeccc----eeEEEEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEee
Q psy11311 419 TILSVEANPCNEELLAVCGLK----ECIVFSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVT 486 (499)
Q Consensus 419 ~Vlsl~~NP~ne~~LAV~Glk----eC~Vlti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT 486 (499)
.+.+++++|-. ++||.+..+ ..+|..++-.|... ..+. .. +. +..+.|-|+.+ .|+++.
T Consensus 60 ~~~~~~~SpDg-~~la~~~~~~~~~~~~l~~~~~~~g~~---~~l~-~~--~~-~~~~~wspdg~-~l~~~~ 122 (347)
T 2gop_A 60 NATMPRISPDG-KKIAFMRANEEKKVSEIWVADLETLSS---KKIL-EA--KN-IRSLEWNEDSR-KLLIVG 122 (347)
T ss_dssp SCEEEEECTTS-SEEEEEEEETTTTEEEEEEEETTTTEE---EEEE-EE--SE-EEEEEECTTSS-EEEEEE
T ss_pred cCCCeEECCCC-CEEEEEEeccCCCcceEEEEECCCCce---EEEE-cC--CC-ccceeECCCCC-EEEEEE
Confidence 35678899876 677777653 45677776544301 1111 11 22 88899999876 577776
No 197
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=26.52 E-value=2.1e+02 Score=27.95 Aligned_cols=104 Identities=6% Similarity=-0.079 Sum_probs=60.0
Q ss_pred ceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecCCCCccc
Q psy11311 375 QHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTSGMSQAT 454 (499)
Q Consensus 375 q~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~~G~~v~ 454 (499)
.+|+.+....++|.+++...+ +.+.+.+++-+=..|+.. .+.|.|.- ..-.|..|++..-++.
T Consensus 106 ~~Ly~ltw~~~~v~V~D~~Tl-------------~~~~ti~~~~eGwGLt~D---g~~L~vSd-Gs~~l~~iDp~T~~v~ 168 (268)
T 3nok_A 106 ERLYQLTWTEGLLFTWSGMPP-------------QRERTTRYSGEGWGLCYW---NGKLVRSD-GGTMLTFHEPDGFALV 168 (268)
T ss_dssp SCEEEEESSSCEEEEEETTTT-------------EEEEEEECSSCCCCEEEE---TTEEEEEC-SSSEEEEECTTTCCEE
T ss_pred CEEEEEEccCCEEEEEECCcC-------------cEEEEEeCCCceeEEecC---CCEEEEEC-CCCEEEEEcCCCCeEE
Confidence 466666677888888887443 222222333332344432 45566655 3778999987654488
Q ss_pred ceeeeccccCCCceeEeeEEecCCCceEEEeecCceEEeecC
Q psy11311 455 DSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLR 496 (499)
Q Consensus 455 d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs 496 (499)
.++.|.-.-..=.+++-++|+.| ....++--.+.|-+-|..
T Consensus 169 ~~I~V~~~g~~v~~lNeLe~~dG-~lyanvw~s~~I~vIDp~ 209 (268)
T 3nok_A 169 GAVQVKLRGQPVELINELECANG-VIYANIWHSSDVLEIDPA 209 (268)
T ss_dssp EEEECEETTEECCCEEEEEEETT-EEEEEETTCSEEEEECTT
T ss_pred EEEEeCCCCcccccccccEEeCC-EEEEEECCCCeEEEEeCC
Confidence 88887653222357788888876 333333224455555543
No 198
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=25.42 E-value=3.2e+02 Score=23.38 Aligned_cols=101 Identities=8% Similarity=0.051 Sum_probs=57.5
Q ss_pred eEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecCCCCcccc
Q psy11311 376 HLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTSGMSQATD 455 (499)
Q Consensus 376 ~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~~G~~v~d 455 (499)
+|++.....+.|.+++...-.. .......+ ..+..|++.|.. .|-|+...+-.|..++.+|. ...
T Consensus 162 ~l~v~~~~~~~i~~~~~~~~~~------~~~~~~~~------~~p~~i~~d~~g--~l~v~~~~~~~v~~~~~~~~-~~~ 226 (270)
T 1rwi_B 162 NVYVTDTDNNRVVKLEAESNNQ------VVLPFTDI------TAPWGIAVDEAG--TVYVTEHNTNQVVKLLAGST-TST 226 (270)
T ss_dssp CEEEEEGGGTEEEEECTTTCCE------EECCCSSC------CSEEEEEECTTC--CEEEEETTTSCEEEECTTCS-CCE
T ss_pred CEEEEECCCCEEEEEecCCCce------EeecccCC------CCceEEEECCCC--CEEEEECCCCcEEEEcCCCC-cce
Confidence 3645544567888888643111 00111111 335678888755 67777776667888888877 221
Q ss_pred eeeeccccCCCceeEeeEEecCCCceEEEee--cCceEEeecCC
Q psy11311 456 SITINPHCETSNYIIKALWIPGRQSTLAIVT--ALNIKIYQLRP 497 (499)
Q Consensus 456 ~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT--~~fVKIYDLs~ 497 (499)
. ........+..+.+-|.. .|.|+. +..|++|++..
T Consensus 227 ~----~~~~~~~~p~~i~~~~~g--~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 227 V----LPFTGLNTPLAVAVDSDR--TVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp E----CCCCSCSCEEEEEECTTC--CEEEEEGGGTEEEEECCCG
T ss_pred e----eccCCCCCceeEEECCCC--CEEEEECCCCEEEEEcCCC
Confidence 1 111112456666666653 355544 67899999865
No 199
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=25.35 E-value=3.1e+02 Score=26.25 Aligned_cols=106 Identities=10% Similarity=0.020 Sum_probs=58.4
Q ss_pred ceEEEEeecCCeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeeeeccceeEEEEecCCCCccc
Q psy11311 375 QHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTSGMSQAT 454 (499)
Q Consensus 375 q~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~~G~~v~ 454 (499)
.+|+...-..+.|.+++...+=..+ .+.+. .+.+ ..|+. +.+.|.|+- ..-.|..|+...-++.
T Consensus 76 ~~lyv~t~~~~~v~viD~~t~~v~~-----~i~~g----~~~g---~glt~---Dg~~l~vs~-gs~~l~viD~~t~~v~ 139 (266)
T 2iwa_A 76 EKLYQVVWLKNIGFIYDRRTLSNIK-----NFTHQ----MKDG---WGLAT---DGKILYGSD-GTSILYEIDPHTFKLI 139 (266)
T ss_dssp TEEEEEETTCSEEEEEETTTTEEEE-----EEECC----SSSC---CEEEE---CSSSEEEEC-SSSEEEEECTTTCCEE
T ss_pred CEEEEEEecCCEEEEEECCCCcEEE-----EEECC----CCCe---EEEEE---CCCEEEEEC-CCCeEEEEECCCCcEE
Confidence 4676666667889998875431110 01111 1222 22443 245566666 3668999998765488
Q ss_pred ceeeeccccCCCceeEeeEEecCCCceEEEeecCceEEeecCC
Q psy11311 455 DSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLRP 497 (499)
Q Consensus 455 d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDLs~ 497 (499)
.++.|.-.-..-.+++-++|+.| ..+.++-..+.|-+-|+..
T Consensus 140 ~~I~Vg~~~~p~~~~nele~~dg-~lyvn~~~~~~V~vID~~t 181 (266)
T 2iwa_A 140 KKHNVKYNGHRVIRLNELEYING-EVWANIWQTDCIARISAKD 181 (266)
T ss_dssp EEEECEETTEECCCEEEEEEETT-EEEEEETTSSEEEEEETTT
T ss_pred EEEEECCCCcccccceeEEEECC-EEEEecCCCCeEEEEECCC
Confidence 88887643222235667788844 3333333345666666643
No 200
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=24.11 E-value=4.4e+02 Score=28.75 Aligned_cols=72 Identities=10% Similarity=0.086 Sum_probs=45.0
Q ss_pred ceeEEEeeecCCCcceeeeeccceeEEEEecC-CCCcccceeeeccccCCCceeEeeEEecCCCceEEEeec--------
Q psy11311 417 PITILSVEANPCNEELLAVCGLKECIVFSFTS-GMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTA-------- 487 (499)
Q Consensus 417 pF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~-~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~-------- 487 (499)
...|.+++++|-. ++||+++-+ -.|..++- .|+ +. .+. ......+..+.|-|..+ .||.+..
T Consensus 378 ~~~~~~~~~SpDG-~~la~~~~~-~~v~~~d~~tg~-~~---~~~--~~~~~~v~~~~~SpDG~-~la~~~~~~~~~~~~ 448 (1045)
T 1k32_A 378 LGNVFAMGVDRNG-KFAVVANDR-FEIMTVDLETGK-PT---VIE--RSREAMITDFTISDNSR-FIAYGFPLKHGETDG 448 (1045)
T ss_dssp CCSEEEEEECTTS-SEEEEEETT-SEEEEEETTTCC-EE---EEE--ECSSSCCCCEEECTTSC-EEEEEEEECSSTTCS
T ss_pred ccceeeeEECCCC-CEEEEECCC-CeEEEEECCCCc-eE---Eec--cCCCCCccceEECCCCC-eEEEEecCccccccC
Confidence 4567889999965 778877654 24444443 344 21 111 01245567899999877 5666554
Q ss_pred ---CceEEeecCC
Q psy11311 488 ---LNIKIYQLRP 497 (499)
Q Consensus 488 ---~fVKIYDLs~ 497 (499)
..|++||+..
T Consensus 449 ~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 449 YVMQAIHVYDMEG 461 (1045)
T ss_dssp CCEEEEEEEETTT
T ss_pred CCCCeEEEEECCC
Confidence 3799999863
No 201
>3v2d_D 50S ribosomal protein L2; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_B 2hgj_D 2hgq_D 2hgu_D 1vsa_B 2j03_D 2jl6_D 2jl8_D 2v47_D 2v49_D 2wdi_D 2wdj_D 2wdl_D 2wdn_D 2wh2_D 2wh4_D 2wrj_D 2wrl_D 2wro_D 2wrr_D ...
Probab=23.56 E-value=1.8e+02 Score=28.96 Aligned_cols=89 Identities=13% Similarity=0.222 Sum_probs=66.2
Q ss_pred cccccccccccccceeEEEeeecCCCcceeeeeccce-eEEEEecCCCCcccceeeeccccC-------------CCcee
Q psy11311 404 RKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKE-CIVFSFTSGMSQATDSITINPHCE-------------TSNYI 469 (499)
Q Consensus 404 ~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV~Glke-C~Vlti~~~G~~v~d~l~i~l~l~-------------~~~fI 469 (499)
|.++++|..+..++-.|+.|...|....+||.+-|+| -.=+.+-+.|-.|.|.+.....-+ .|.+|
T Consensus 63 R~IDf~R~~k~~i~g~V~~IeyDPnRsA~IAlv~~~dg~k~yIlAp~gl~~Gd~I~sg~~a~i~~GN~lPL~~IP~GT~I 142 (276)
T 3v2d_D 63 RIIDFKRWDKVGIPAKVAAIEYDPNRSARIALLHYVDGEKRYIIAPDGLQVGQQVVAGPDAPIQVGNALPLRFIPVGTVV 142 (276)
T ss_dssp ECCCCCCGGGTTCCEEEEEEECCTTSSSCEEEEEETTSCEEEEECBTTCCTTCEECBSTTCCSSTTCEEEGGGSCTTCEE
T ss_pred EEeeeccccCCCCCEEEEEEEECCCCCceEEEEEeCCCCEEEEEeeCCCcCCCEEEeCCCCCCCCCCeehhhhCCCCCEE
Confidence 4566677666778999999999999999999887765 356667777776777765544322 47899
Q ss_pred EeeEEecCCCceEEEeecCceEE
Q psy11311 470 IKALWIPGRQSTLAIVTALNIKI 492 (499)
Q Consensus 470 ik~~Wipgsq~~LAVvT~~fVKI 492 (499)
-.++--||.-.+||=..-.+..|
T Consensus 143 hNIE~~pG~Gg~laRsAGt~A~i 165 (276)
T 3v2d_D 143 HAVELEPKKGAKLARAAGTSAQI 165 (276)
T ss_dssp ESEESSTTSCEEESCSTTCCEEE
T ss_pred EEEEecCCCCceEEEeCCCeEEE
Confidence 99999999988887554444443
No 202
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=22.66 E-value=4e+02 Score=25.25 Aligned_cols=41 Identities=15% Similarity=0.077 Sum_probs=33.0
Q ss_pred eeEEEeeecCCCcceeeeeccceeEEEEecCCCCcccceeeec
Q psy11311 418 ITILSVEANPCNEELLAVCGLKECIVFSFTSGMSQATDSITIN 460 (499)
Q Consensus 418 F~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~~G~~v~d~l~i~ 460 (499)
-++-.|+++|..+ -|.++.=++-.|++|+..|. |..++.+.
T Consensus 27 ~~lSGla~~~~~~-~L~aV~d~~~~I~~ld~~g~-v~~~i~l~ 67 (255)
T 3qqz_A 27 NNISSLTWSAQSN-TLFSTINKPAAIVEMTTNGD-LIRTIPLD 67 (255)
T ss_dssp SCEEEEEEETTTT-EEEEEEETTEEEEEEETTCC-EEEEEECS
T ss_pred cCcceeEEeCCCC-EEEEEECCCCeEEEEeCCCC-EEEEEecC
Confidence 4788999999864 44444446999999999999 99998774
No 203
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=22.63 E-value=5.4e+02 Score=25.92 Aligned_cols=118 Identities=12% Similarity=0.073 Sum_probs=63.1
Q ss_pred eeeeeeccCcccccceEEEEeecC-----CeEEEeehhhhcccccccccccccccccccccceeEEEeeecCCCcceeee
Q psy11311 361 RTCMCILSSPQSKRQHLVAVSHEK-----GKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAV 435 (499)
Q Consensus 361 R~amc~L~sp~g~rq~LvAVshEk-----~KVtllqls~LLkqadss~~Kltl~rLs~~~VpF~Vlsl~~NP~ne~~LAV 435 (499)
-.-+..|..|.|+| + -|+.++ +.|++++... .+.+...++.+.- +|+++|-. ++|.|
T Consensus 33 ~~~~~~~~~pd~~~--v-yV~~~~~~~~~~~V~ViD~~t-------------~~v~~~I~vG~~P-~va~spDG-~~lyV 94 (386)
T 3sjl_D 33 EPRILEAPAPDARR--V-YVNDPAHFAAVTQQFVIDGEA-------------GRVIGMIDGGFLP-NPVVADDG-SFIAH 94 (386)
T ss_dssp CCCBCCCCCCCTTE--E-EEEECGGGCSSEEEEEEETTT-------------TEEEEEEEECSSC-EEEECTTS-SCEEE
T ss_pred ccceeeccCCCCCE--E-EEEcCcccCCCCEEEEEECCC-------------CeEEEEEECCCCC-cEEECCCC-CEEEE
Confidence 34445677787653 4 555564 7999998732 2223333444443 58999966 67777
Q ss_pred ecc---------ceeEEEEecCCCCcccceeeecc--ccCCCceeEeeEEecCCCceEEEee---cCceEEeecCC
Q psy11311 436 CGL---------KECIVFSFTSGMSQATDSITINP--HCETSNYIIKALWIPGRQSTLAIVT---ALNIKIYQLRP 497 (499)
Q Consensus 436 ~Gl---------keC~Vlti~~~G~~v~d~l~i~l--~l~~~~fIik~~Wipgsq~~LAVvT---~~fVKIYDLs~ 497 (499)
+.- ++=.|..|+..--++..++.+.. .-..|.+-..+..-|..+ +|.|.- ...|.++|+..
T Consensus 95 an~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk-~lyVan~~~~~~VsVID~~t 169 (386)
T 3sjl_D 95 ASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGK-TLLFYQFSPAPAVGVVDLEG 169 (386)
T ss_dssp EEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSS-EEEEEECSSSCEEEEEETTT
T ss_pred EcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCC-EEEEEEcCCCCeEEEEECCC
Confidence 642 23446556554333777777643 111122333344445432 233321 23577777754
No 204
>2kwq_A Protein MCM10 homolog; DNA replication, DNA binding, zinc motif, zinc ribbon binding protein; NMR {Xenopus laevis}
Probab=22.39 E-value=37 Score=28.80 Aligned_cols=43 Identities=28% Similarity=0.614 Sum_probs=27.0
Q ss_pred ccceeeccCCCCCCCceeehhhhhhhcCCCeEEEee--cCceEeeCCCC
Q psy11311 75 NQHWYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSK--FGNFFCDCGAK 121 (499)
Q Consensus 75 rQ~~Y~C~TC~~~~~~gIC~aCA~vCH~GHdLvy~K--~r~F~CDCG~~ 121 (499)
.=.+|.|.+|+-.. +-.=.-|.. .+|+|...+ .|=|.|.|++.
T Consensus 12 ~~~av~C~~C~yt~-~~~~~~C~~---~~H~l~~~~a~KRFFkC~C~~R 56 (92)
T 2kwq_A 12 SCRVVTCKTCKYTH-FKPKETCVS---ENHDFHWHNGVKRFFKCPCGNR 56 (92)
T ss_dssp EEEEEEETTTCCEE-SSCCHHHHH---TTCCEEEEEEECEEEECTTSCE
T ss_pred eEEEEEccCCccee-cCcchhHHh---cCCceEEEeeeEEEEECCCCCc
Confidence 44689999998543 112233333 577776433 38889999885
No 205
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=21.40 E-value=5e+02 Score=27.01 Aligned_cols=72 Identities=11% Similarity=0.016 Sum_probs=44.5
Q ss_pred EEeeecCCCcceeeeeccce-------------eEEEEecCCCCcccceeeeccccCCCceeEeeEEecCCCceEEEeec
Q psy11311 421 LSVEANPCNEELLAVCGLKE-------------CIVFSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTA 487 (499)
Q Consensus 421 lsl~~NP~ne~~LAV~Glke-------------C~Vlti~~~G~~v~d~l~i~l~l~~~~fIik~~Wipgsq~~LAVvT~ 487 (499)
.++++.|- +.|++....+ .+|...+-.+.+..|++..+..-. ..|+..+.|=|..+ .|+++.+
T Consensus 212 ~~~~wspD--~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~-~~~~~~~~~SpDG~-~l~~~~~ 287 (741)
T 1yr2_A 212 SGLAWLGN--DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL-PKRGHGASVSSDGR-WVVITSS 287 (741)
T ss_dssp CCCEESTT--SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC-TTCEEEEEECTTSC-EEEEEEE
T ss_pred ccEEEECC--CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC-CeEEEEEEECCCCC-EEEEEEE
Confidence 46778886 7788776543 345555543332445565544322 34788899988765 5777664
Q ss_pred C------ceEEeecC
Q psy11311 488 L------NIKIYQLR 496 (499)
Q Consensus 488 ~------fVKIYDLs 496 (499)
+ -|.++|+.
T Consensus 288 ~~~~~~~~l~~~d~~ 302 (741)
T 1yr2_A 288 EGTDPVNTVHVARVT 302 (741)
T ss_dssp CTTCSCCEEEEEEEE
T ss_pred ccCCCcceEEEEECC
Confidence 3 57777874
No 206
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=20.29 E-value=4.6e+02 Score=24.95 Aligned_cols=106 Identities=12% Similarity=0.055 Sum_probs=0.0
Q ss_pred cceEEEEeecCCeEEEeehhhhccccccccccccccccccccc---ceeEEEeeecCCCcceeeeeccceeEEEEecC-C
Q psy11311 374 RQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSL---PITILSVEANPCNEELLAVCGLKECIVFSFTS-G 449 (499)
Q Consensus 374 rq~LvAVshEk~KVtllqls~LLkqadss~~Kltl~rLs~~~V---pF~Vlsl~~NP~ne~~LAV~GlkeC~Vlti~~-~ 449 (499)
.++| .||...++|++++. -|++.+.+..| +++|-.+----+.+..|-+.-+..=.|..|++ +
T Consensus 114 g~~L-~vSdgs~~l~~iDp-------------~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~t 179 (243)
T 3mbr_X 114 DSHL-YMSDGTAVIRKLDP-------------DTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPAS 179 (243)
T ss_dssp SSCE-EEECSSSEEEEECT-------------TTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTT
T ss_pred CCEE-EEECCCCeEEEEeC-------------CCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCC
Q ss_pred CCcccceeeeccc--------cCCCceeEeeEEecCCCceEEEeecCceEEeec
Q psy11311 450 MSQATDSITINPH--------CETSNYIIKALWIPGRQSTLAIVTALNIKIYQL 495 (499)
Q Consensus 450 G~~v~d~l~i~l~--------l~~~~fIik~~Wipgsq~~LAVvT~~fVKIYDL 495 (499)
|+ |..++.+..- ...+...+-+-|-|+.. +|-|+=-.-=|+|.+
T Consensus 180 G~-V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~-~lfVTGK~wp~~~~v 231 (243)
T 3mbr_X 180 GK-VVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHD-RLFVTGKRWPMLYEI 231 (243)
T ss_dssp CB-EEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTT-EEEEEETTCSEEEEE
T ss_pred CC-EEEEEECCcCccccccccCCcCCceEEEEEcCCCC-EEEEECCCCCcEEEE
Done!