Your job contains 1 sequence.
>psy11311
MSEFIVALFPKGLNKSLAECVGESEAFPPPLDLDIEWNDDVTHDDDEDSAGDESDEDSLC
NKLCTYTITQKEFMNQHWYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFGNFFCDCGA
KENGQCLALTKRNPQESSAAMSSASLSHQESSSMPSSLRQRSSFEPILSNSYHYMYDDNY
YGYNQIKIENLREKLGPESSAAMSSASLSHQESSSMPSSLRQRSSFEPILSNSYHYMYDD
NYYGYNQIKIENLREKLGPVSPNIFDRIWEILPPILEVFKEMTPALKAGIAKTSPVGVFD
RVSHGLFQLQNMQHKFVENTDNLMVPVMGSQEGAFENVRMNLNGDQGQTIRQLISNNSIR
RTCMCILSSPQSKRQHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITI
LSVEANPCNEELLAVCGLKECIVFSFTSGMSQATDSITINPHCETSNYIIKALWIPGRQS
TLAIVTALNIKIYQLRPES
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11311
(499 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-090313-341 - symbol:ubr4 "ubiquitin protein... 633 2.2e-97 2
UNIPROTKB|Q5T4S7 - symbol:UBR4 "E3 ubiquitin-protein liga... 625 5.9e-97 2
RGD|1563121 - symbol:Ubr4 "ubiquitin protein ligase E3 co... 624 7.6e-97 2
UNIPROTKB|Q2TL32 - symbol:Ubr4 "E3 ubiquitin-protein liga... 624 7.6e-97 2
UNIPROTKB|G3N0A8 - symbol:UBR4 "Uncharacterized protein" ... 621 8.4e-97 2
UNIPROTKB|E2RF02 - symbol:UBR4 "Uncharacterized protein" ... 623 9.6e-97 2
MGI|MGI:1916366 - symbol:Ubr4 "ubiquitin protein ligase E... 622 1.2e-96 2
UNIPROTKB|F1P2G5 - symbol:UBR4 "Uncharacterized protein" ... 622 1.2e-96 2
UNIPROTKB|E1BHT5 - symbol:UBR4 "Uncharacterized protein" ... 621 1.6e-96 2
FB|FBgn0011230 - symbol:poe "purity of essence" species:7... 570 2.3e-86 2
UNIPROTKB|Q29L39 - symbol:poe "Protein purity of essence"... 570 6.3e-86 2
DICTYBASE|DDB_G0283893 - symbol:DDB_G0283893 "unknown" sp... 233 5.4e-30 2
TAIR|locus:2076487 - symbol:BIG "BIG" species:3702 "Arabi... 219 2.0e-20 2
UNIPROTKB|B9G2A8 - symbol:LOC_Os09g07294 "Auxin transport... 215 9.6e-19 2
WB|WBGene00016650 - symbol:C44E4.1 species:6239 "Caenorha... 228 1.1e-14 2
DICTYBASE|DDB_G0292302 - symbol:DDB_G0292302 species:4468... 164 1.1e-08 1
UNIPROTKB|B5MCV6 - symbol:FBXO11 "F-box only protein 11" ... 133 3.9e-08 1
UNIPROTKB|E7EP88 - symbol:FBXO11 "F-box only protein 11" ... 133 3.9e-08 1
UNIPROTKB|I3LSH3 - symbol:I3LSH3 "Uncharacterized protein... 131 6.4e-08 1
UNIPROTKB|B3KUR1 - symbol:FBXO11 "cDNA FLJ40415 fis, clon... 143 5.0e-07 1
WB|WBGene00009460 - symbol:F36A2.13 species:6239 "Caenorh... 153 7.0e-07 1
UNIPROTKB|G5EDT9 - symbol:F36A2.13 "Protein F36A2.13" spe... 153 7.0e-07 1
MGI|MGI:2147134 - symbol:Fbxo11 "F-box protein 11" specie... 143 2.1e-06 1
RGD|727935 - symbol:Fbxo11 "F-box protein 11" species:101... 143 2.1e-06 1
UNIPROTKB|Q7TSL3 - symbol:Fbxo11 "F-box only protein 11" ... 143 2.1e-06 1
UNIPROTKB|F1PLE4 - symbol:FBXO11 "Uncharacterized protein... 143 2.1e-06 1
UNIPROTKB|F1NV53 - symbol:FBXO11 "Uncharacterized protein... 143 2.2e-06 1
ZFIN|ZDB-GENE-061103-70 - symbol:fbxo11a "F-box protein 1... 143 2.2e-06 1
UNIPROTKB|Q86XK2 - symbol:FBXO11 "F-box only protein 11" ... 143 2.3e-06 1
WB|WBGene00015268 - symbol:BE0003N10.3 species:6239 "Caen... 144 2.4e-06 1
UNIPROTKB|J9P5M9 - symbol:UBR5 "Uncharacterized protein" ... 146 4.0e-06 3
RGD|621236 - symbol:Ubr5 "ubiquitin protein ligase E3 com... 146 5.6e-06 3
UNIPROTKB|Q62671 - symbol:Ubr5 "E3 ubiquitin-protein liga... 146 5.6e-06 3
MGI|MGI:1918040 - symbol:Ubr5 "ubiquitin protein ligase E... 146 5.6e-06 3
UNIPROTKB|F1P0U1 - symbol:Gga.55416 "Uncharacterized prot... 146 6.9e-06 3
UNIPROTKB|E7EMW7 - symbol:UBR5 "E3 ubiquitin-protein liga... 146 7.1e-06 3
UNIPROTKB|F1N0L2 - symbol:UBR5 "Uncharacterized protein" ... 146 7.1e-06 3
UNIPROTKB|F1PBF9 - symbol:UBR5 "Uncharacterized protein" ... 146 7.1e-06 3
UNIPROTKB|J3KMW7 - symbol:UBR5 "E3 ubiquitin-protein liga... 146 7.1e-06 3
UNIPROTKB|O95071 - symbol:UBR5 "E3 ubiquitin-protein liga... 146 7.1e-06 3
ZFIN|ZDB-GENE-030131-6559 - symbol:ubr5 "ubiquitin protei... 146 1.5e-05 2
WB|WBGene00001089 - symbol:dre-1 species:6239 "Caenorhabd... 135 1.8e-05 1
UNIPROTKB|Q94251 - symbol:dre-1 "Protein DRE-1" species:6... 135 1.8e-05 1
FB|FBgn0037760 - symbol:FBX011 "FBX011 ortholog" species:... 136 1.8e-05 1
UNIPROTKB|I3LN00 - symbol:FBXO11 "Uncharacterized protein... 134 2.3e-05 1
FB|FBgn0002431 - symbol:hyd "hyperplastic discs" species:... 136 4.6e-05 3
>ZFIN|ZDB-GENE-090313-341 [details] [associations]
symbol:ubr4 "ubiquitin protein ligase E3 component
n-recognin 4" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR003126 Pfam:PF02207
PROSITE:PS51157 ZFIN:ZDB-GENE-090313-341 GO:GO:0008270
GO:GO:0016567 GO:GO:0004842 InterPro:IPR025704 Pfam:PF13764
InterPro:IPR013993 SMART:SM00396 GeneTree:ENSGT00600000084471
EMBL:CT027552 IPI:IPI00481863 Ensembl:ENSDART00000024846
ArrayExpress:F1QWA2 Bgee:F1QWA2 Uniprot:F1QWA2
Length = 5152
Score = 633 (227.9 bits), Expect = 2.2e-97, Sum P(2) = 2.2e-97
Identities = 129/221 (58%), Positives = 161/221 (72%)
Query: 275 ILEVFKEMTPALKAGIAKTSPVGVFDRVSHGLFQLQNMQHKFVENTDNLMVPVMGSQEGA 334
+LE+ + A++ + S VG R H L +L Q K VE TD LMVP +GSQEGA
Sbjct: 1787 VLELLIFLMDAIQTNFQQASAVGSSSRAQHALNELHT-QDKTVEMTDQLMVPTLGSQEGA 1845
Query: 335 FENVRMNLNGDQGQTIRQLISNNSIRRTCMCILSSPQSKRQHLVAVSHEKGKITLLQLSG 394
FENVRMN +GDQGQTIRQLIS + +RR MC+LSSP +RQHL AVSHEKGKIT+LQLS
Sbjct: 1846 FENVRMNYSGDQGQTIRQLISAHVLRRVAMCVLSSPHGRRQHL-AVSHEKGKITVLQLSA 1904
Query: 395 LLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTSGMSQAT 454
LLKQ DSSKRKLTL +LAS +P T+LS+ NPCNE+ LAVCGLK+C V +F+S S +
Sbjct: 1905 LLKQADSSKRKLTLTRLASAPVPFTVLSLTGNPCNEDYLAVCGLKDCHVLTFSSTGS-VS 1963
Query: 455 DSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQL 495
D + ++P T N+IIKA+W+PG Q+ LAI+TA +KIY L
Sbjct: 1964 DHLVLHPQLATGNFIIKAIWLPGSQTELAIITADFVKIYDL 2004
Score = 394 (143.8 bits), Expect = 2.2e-97, Sum P(2) = 2.2e-97
Identities = 66/113 (58%), Positives = 86/113 (76%)
Query: 22 GESEAFPPPLDLDIEWNDDVTHXXXXXXXXXXXXXXXLCNKLCTYTITQKEFMNQHWYHC 81
GE +A +++D +W +++ LCNKLCT+TITQKEFMNQHWYHC
Sbjct: 1601 GEEKA----IEVDSDWVEELA-VEEDDSQAEDSDEDSLCNKLCTFTITQKEFMNQHWYHC 1655
Query: 82 HTCKMIDGVGVCSVCAQVCHKNHDITYSKFGNFFCDCGAKENGQCLALTKRNP 134
HTCKM+DGVGVC+VCA+VCHK+H+I+Y+K+G+FFCDCGAKE+G C AL KR+P
Sbjct: 1656 HTCKMVDGVGVCTVCAKVCHKDHEISYAKYGSFFCDCGAKEDGSCQALVKRSP 1708
Score = 40 (19.1 bits), Expect = 7.0e-35, Sum P(2) = 7.0e-35
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 367 LSSPQSKRQHLVAVSHEKGKITL 389
L P+S +H + +KGK+T+
Sbjct: 1726 LRMPESAIRHQSSSPADKGKVTI 1748
>UNIPROTKB|Q5T4S7 [details] [associations]
symbol:UBR4 "E3 ubiquitin-protein ligase UBR4" species:9606
"Homo sapiens" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0019048 "virus-host
interaction" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] InterPro:IPR003126 Pfam:PF02207 PROSITE:PS51157
UniPathway:UPA00143 GO:GO:0016021 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0005856 GO:GO:0046872
GO:GO:0008270 GO:GO:0004842 eggNOG:NOG236675 KO:K10691
InterPro:IPR025704 Pfam:PF13764 OMA:GHQGFGV EMBL:AF348492
EMBL:AK022322 EMBL:AL137127 EMBL:AL357564 EMBL:AB037728
EMBL:AB007931 EMBL:BC018694 EMBL:BC063573 EMBL:BC073905
EMBL:BC096758 EMBL:AJ505016 EMBL:AL049972 EMBL:AF055010
IPI:IPI00180305 IPI:IPI00386907 IPI:IPI00640981 IPI:IPI00646605
IPI:IPI00746934 IPI:IPI00843999 PIR:T00076 RefSeq:NP_065816.2
UniGene:Hs.148078 UniGene:Hs.649405 ProteinModelPortal:Q5T4S7
SMR:Q5T4S7 IntAct:Q5T4S7 MINT:MINT-4715511 STRING:Q5T4S7
PhosphoSite:Q5T4S7 DMDM:74744979 PaxDb:Q5T4S7 PRIDE:Q5T4S7
Ensembl:ENST00000375217 Ensembl:ENST00000375218
Ensembl:ENST00000375224 Ensembl:ENST00000375226
Ensembl:ENST00000375254 Ensembl:ENST00000375267
Ensembl:ENST00000417040 Ensembl:ENST00000419533
Ensembl:ENST00000425413 GeneID:23352 KEGG:hsa:23352 UCSC:uc001bbi.3
UCSC:uc001bbj.1 UCSC:uc001bbm.1 CTD:23352 GeneCards:GC01M019401
H-InvDB:HIX0000191 HGNC:HGNC:30313 HPA:HPA021046 MIM:609890
neXtProt:NX_Q5T4S7 PharmGKB:PA162407958 HOVERGEN:HBG058328
InParanoid:Q5T4S7 OrthoDB:EOG49W2DG PhylomeDB:Q5T4S7 ChiTaRS:UBR4
GenomeRNAi:23352 NextBio:45346 ArrayExpress:Q5T4S7 Bgee:Q5T4S7
Genevestigator:Q5T4S7 Uniprot:Q5T4S7
Length = 5183
Score = 625 (225.1 bits), Expect = 5.9e-97, Sum P(2) = 5.9e-97
Identities = 127/223 (56%), Positives = 161/223 (72%)
Query: 273 PPILEVFKEMTPALKAGIAKTSPVGVFDRVSHGLFQLQNMQHKFVENTDNLMVPVMGSQE 332
P +L++ + A++ + S VG R L +L ++ K VE TD LMVP +GSQE
Sbjct: 1809 PLVLDMLNFLMDAIQTNFQQASAVGSSSRAQQALSELHTVE-KAVEMTDQLMVPTLGSQE 1867
Query: 333 GAFENVRMNLNGDQGQTIRQLISNNSIRRTCMCILSSPQSKRQHLVAVSHEKGKITLLQL 392
GAFENVRMN +GDQGQTIRQLIS + +RR MC+LSSP +RQHL AVSHEKGKIT+LQL
Sbjct: 1868 GAFENVRMNYSGDQGQTIRQLISAHVLRRVAMCVLSSPHGRRQHL-AVSHEKGKITVLQL 1926
Query: 393 SGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTSGMSQ 452
S LLKQ DSSKRKLTL +LAS +P T+LS+ NPC E+ LAVCGLK+C V +F+S S
Sbjct: 1927 SALLKQADSSKRKLTLTRLASAPVPFTVLSLTGNPCKEDYLAVCGLKDCHVLTFSSSGS- 1985
Query: 453 ATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQL 495
+D + ++P T N+IIKA+W+PG Q+ LAIVTA +KIY L
Sbjct: 1986 VSDHLVLHPQLATGNFIIKAVWLPGSQTELAIVTADFVKIYDL 2028
Score = 398 (145.2 bits), Expect = 5.9e-97, Sum P(2) = 5.9e-97
Identities = 64/104 (61%), Positives = 82/104 (78%)
Query: 31 LDLDIEWNDDVTHXXXXXXXXXXXXXXXLCNKLCTYTITQKEFMNQHWYHCHTCKMIDGV 90
+++D +W +++ LCNKLCT+TITQKEFMNQHWYHCHTCKM+DGV
Sbjct: 1630 IEVDSDWVEELA-VEEEDSQAEDSDEDSLCNKLCTFTITQKEFMNQHWYHCHTCKMVDGV 1688
Query: 91 GVCSVCAQVCHKNHDITYSKFGNFFCDCGAKENGQCLALTKRNP 134
GVC+VCA+VCHK+H+I+Y+K+G+FFCDCGAKE+G CLAL KR P
Sbjct: 1689 GVCTVCAKVCHKDHEISYAKYGSFFCDCGAKEDGSCLALVKRTP 1732
Score = 47 (21.6 bits), Expect = 1.0e-36, Sum P(3) = 1.0e-36
Identities = 36/155 (23%), Positives = 62/155 (40%)
Query: 309 LQNMQHKFVEN-TDNLMVPVMGSQEGAFENVR-MNLNGDQGQTIRQLISNNSIRRTCMCI 366
L Q FV L++ + GS+E + +R ++ + I++L+ I +
Sbjct: 3198 LMIQQTPFVRRQVRKLLLFICGSKE-KYRQLRDLHTLDSHVRGIKKLLEEQGIFLRASVV 3256
Query: 367 LSSPQSKRQHLVAVS---HEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSV 423
+S S Q+ +S H K + + Q K L L VS ++
Sbjct: 3257 TASSGSALQYDTLISLMEHLKACAEIAAQRTINWQKFCIKDDSVLYFLLQVSF---LVDE 3313
Query: 424 EANPCNEELL--AVCGLKECIVFSFTSGMSQATDS 456
+P +LL A+CG K + +SG S A+ S
Sbjct: 3314 GVSPVLLQLLSCALCGSKVLAALAASSGSSSASSS 3348
Score = 37 (18.1 bits), Expect = 1.0e-36, Sum P(3) = 1.0e-36
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 249 KIENLREKLGPVSPNIFDRIW-EILPPILEVFKEMTPALKAGIAK 292
+I+ + + + P +FD W L L + + TP ++ + K
Sbjct: 3170 QIKKITDTNSRIPPPVFDHSWFYFLSEYLMI--QQTPFVRRQVRK 3212
>RGD|1563121 [details] [associations]
symbol:Ubr4 "ubiquitin protein ligase E3 component n-recognin 4"
species:10116 "Rattus norvegicus" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005516 "calmodulin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR003126 Pfam:PF02207
PROSITE:PS51157 UniPathway:UPA00143 RGD:1563121 GO:GO:0016021
GO:GO:0005634 GO:GO:0005737 GO:GO:0005856 GO:GO:0046872
GO:GO:0008270 GO:GO:0004842 eggNOG:NOG236675 KO:K10691
InterPro:IPR025704 Pfam:PF13764 CTD:23352 HOVERGEN:HBG058328
EMBL:AY850927 EMBL:BC091421 IPI:IPI00359416 RefSeq:NP_001034115.1
UniGene:Rn.37755 ProteinModelPortal:Q2TL32 STRING:Q2TL32
PhosphoSite:Q2TL32 PRIDE:Q2TL32 GeneID:313658 KEGG:rno:313658
UCSC:RGD:1563121 HOGENOM:HOG000115603 InParanoid:Q2TL32
NextBio:666613 ArrayExpress:Q2TL32 Genevestigator:Q2TL32
Uniprot:Q2TL32
Length = 5194
Score = 624 (224.7 bits), Expect = 7.6e-97, Sum P(2) = 7.6e-97
Identities = 127/223 (56%), Positives = 160/223 (71%)
Query: 273 PPILEVFKEMTPALKAGIAKTSPVGVFDRVSHGLFQLQNMQHKFVENTDNLMVPVMGSQE 332
P +L++ + A++ + S VG R L +L + K VE TD LMVP +GSQE
Sbjct: 1809 PLVLDMLNFLMDAIQTNFQQASAVGSSSRAQQALSELHTVD-KVVEMTDQLMVPTLGSQE 1867
Query: 333 GAFENVRMNLNGDQGQTIRQLISNNSIRRTCMCILSSPQSKRQHLVAVSHEKGKITLLQL 392
GAFENVRMN +GDQGQTIRQLIS + +RR MC+LSSP +RQHL AVSHEKGKIT+LQL
Sbjct: 1868 GAFENVRMNYSGDQGQTIRQLISAHVLRRVAMCVLSSPHGRRQHL-AVSHEKGKITVLQL 1926
Query: 393 SGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTSGMSQ 452
S LLKQ DSSKRKLTL +LAS +P T+LS+ NPC E+ LAVCGLK+C V +F+S S
Sbjct: 1927 SALLKQADSSKRKLTLTRLASAPVPFTVLSLTGNPCKEDYLAVCGLKDCHVLTFSSSGS- 1985
Query: 453 ATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQL 495
+D + ++P T N+IIKA+W+PG Q+ LAIVTA +KIY L
Sbjct: 1986 VSDHLVLHPQLATGNFIIKAVWLPGSQTELAIVTADFVKIYDL 2028
Score = 398 (145.2 bits), Expect = 7.6e-97, Sum P(2) = 7.6e-97
Identities = 64/104 (61%), Positives = 82/104 (78%)
Query: 31 LDLDIEWNDDVTHXXXXXXXXXXXXXXXLCNKLCTYTITQKEFMNQHWYHCHTCKMIDGV 90
+++D +W +++ LCNKLCT+TITQKEFMNQHWYHCHTCKM+DGV
Sbjct: 1631 IEVDSDWVEELA-VEEEDSQAEDSDEDSLCNKLCTFTITQKEFMNQHWYHCHTCKMVDGV 1689
Query: 91 GVCSVCAQVCHKNHDITYSKFGNFFCDCGAKENGQCLALTKRNP 134
GVC+VCA+VCHK+H+I+Y+K+G+FFCDCGAKE+G CLAL KR P
Sbjct: 1690 GVCTVCAKVCHKDHEISYAKYGSFFCDCGAKEDGSCLALVKRTP 1733
Score = 38 (18.4 bits), Expect = 4.4e-35, Sum P(2) = 4.4e-35
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 249 KIENLREKLGPVSPNIFDRIW-EILPPILEVFKEMTPALKAGIAK 292
+I+ + + + P +FD W L L + + TP ++ + K
Sbjct: 3182 QIKKIADTSSRIPPPVFDHSWFYFLSEYLMI--QQTPFVRRQVRK 3224
>UNIPROTKB|Q2TL32 [details] [associations]
symbol:Ubr4 "E3 ubiquitin-protein ligase UBR4"
species:10116 "Rattus norvegicus" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR003126 Pfam:PF02207 PROSITE:PS51157
UniPathway:UPA00143 RGD:1563121 GO:GO:0016021 GO:GO:0005634
GO:GO:0005737 GO:GO:0005856 GO:GO:0046872 GO:GO:0008270
GO:GO:0004842 eggNOG:NOG236675 KO:K10691 InterPro:IPR025704
Pfam:PF13764 CTD:23352 HOVERGEN:HBG058328 EMBL:AY850927
EMBL:BC091421 IPI:IPI00359416 RefSeq:NP_001034115.1
UniGene:Rn.37755 ProteinModelPortal:Q2TL32 STRING:Q2TL32
PhosphoSite:Q2TL32 PRIDE:Q2TL32 GeneID:313658 KEGG:rno:313658
UCSC:RGD:1563121 HOGENOM:HOG000115603 InParanoid:Q2TL32
NextBio:666613 ArrayExpress:Q2TL32 Genevestigator:Q2TL32
Uniprot:Q2TL32
Length = 5194
Score = 624 (224.7 bits), Expect = 7.6e-97, Sum P(2) = 7.6e-97
Identities = 127/223 (56%), Positives = 160/223 (71%)
Query: 273 PPILEVFKEMTPALKAGIAKTSPVGVFDRVSHGLFQLQNMQHKFVENTDNLMVPVMGSQE 332
P +L++ + A++ + S VG R L +L + K VE TD LMVP +GSQE
Sbjct: 1809 PLVLDMLNFLMDAIQTNFQQASAVGSSSRAQQALSELHTVD-KVVEMTDQLMVPTLGSQE 1867
Query: 333 GAFENVRMNLNGDQGQTIRQLISNNSIRRTCMCILSSPQSKRQHLVAVSHEKGKITLLQL 392
GAFENVRMN +GDQGQTIRQLIS + +RR MC+LSSP +RQHL AVSHEKGKIT+LQL
Sbjct: 1868 GAFENVRMNYSGDQGQTIRQLISAHVLRRVAMCVLSSPHGRRQHL-AVSHEKGKITVLQL 1926
Query: 393 SGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTSGMSQ 452
S LLKQ DSSKRKLTL +LAS +P T+LS+ NPC E+ LAVCGLK+C V +F+S S
Sbjct: 1927 SALLKQADSSKRKLTLTRLASAPVPFTVLSLTGNPCKEDYLAVCGLKDCHVLTFSSSGS- 1985
Query: 453 ATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQL 495
+D + ++P T N+IIKA+W+PG Q+ LAIVTA +KIY L
Sbjct: 1986 VSDHLVLHPQLATGNFIIKAVWLPGSQTELAIVTADFVKIYDL 2028
Score = 398 (145.2 bits), Expect = 7.6e-97, Sum P(2) = 7.6e-97
Identities = 64/104 (61%), Positives = 82/104 (78%)
Query: 31 LDLDIEWNDDVTHXXXXXXXXXXXXXXXLCNKLCTYTITQKEFMNQHWYHCHTCKMIDGV 90
+++D +W +++ LCNKLCT+TITQKEFMNQHWYHCHTCKM+DGV
Sbjct: 1631 IEVDSDWVEELA-VEEEDSQAEDSDEDSLCNKLCTFTITQKEFMNQHWYHCHTCKMVDGV 1689
Query: 91 GVCSVCAQVCHKNHDITYSKFGNFFCDCGAKENGQCLALTKRNP 134
GVC+VCA+VCHK+H+I+Y+K+G+FFCDCGAKE+G CLAL KR P
Sbjct: 1690 GVCTVCAKVCHKDHEISYAKYGSFFCDCGAKEDGSCLALVKRTP 1733
Score = 38 (18.4 bits), Expect = 4.4e-35, Sum P(2) = 4.4e-35
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 249 KIENLREKLGPVSPNIFDRIW-EILPPILEVFKEMTPALKAGIAK 292
+I+ + + + P +FD W L L + + TP ++ + K
Sbjct: 3182 QIKKIADTSSRIPPPVFDHSWFYFLSEYLMI--QQTPFVRRQVRK 3224
>UNIPROTKB|G3N0A8 [details] [associations]
symbol:UBR4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR003126 InterPro:IPR016024
Pfam:PF02207 PROSITE:PS51157 SUPFAM:SSF48371 SUPFAM:SSF50978
GO:GO:0008270 GO:GO:0016567 GO:GO:0004842 InterPro:IPR025704
Pfam:PF13764 GeneTree:ENSGT00600000084471 EMBL:DAAA02006530
EMBL:DAAA02006531 Ensembl:ENSBTAT00000063469 Uniprot:G3N0A8
Length = 4028
Score = 621 (223.7 bits), Expect = 8.4e-97, Sum P(2) = 8.4e-97
Identities = 126/223 (56%), Positives = 160/223 (71%)
Query: 273 PPILEVFKEMTPALKAGIAKTSPVGVFDRVSHGLFQLQNMQHKFVENTDNLMVPVMGSQE 332
P +L++ + A++ + S VG R L +L + K VE TD LMVP +GSQE
Sbjct: 640 PLVLDMLSFLMDAIQTNFQQASAVGSSSRAQQALRELHTVD-KAVEMTDQLMVPTLGSQE 698
Query: 333 GAFENVRMNLNGDQGQTIRQLISNNSIRRTCMCILSSPQSKRQHLVAVSHEKGKITLLQL 392
GAFENVRMN +GDQGQTIRQLIS + +RR MC+LSSP +RQHL AVSHEKGKIT+LQL
Sbjct: 699 GAFENVRMNYSGDQGQTIRQLISAHVLRRVAMCVLSSPHGRRQHL-AVSHEKGKITVLQL 757
Query: 393 SGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTSGMSQ 452
S LLKQ DSSKRKLTL +LAS +P T+LS+ NPC E+ LAVCGLK+C V +F+S S
Sbjct: 758 SALLKQADSSKRKLTLTRLASAPVPFTVLSLTGNPCKEDYLAVCGLKDCHVLTFSSSGS- 816
Query: 453 ATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQL 495
+D + ++P T N+IIKA+W+PG Q+ LAIVTA +K+Y L
Sbjct: 817 VSDHLVLHPQLATGNFIIKAVWLPGSQTELAIVTADFVKVYDL 859
Score = 398 (145.2 bits), Expect = 8.4e-97, Sum P(2) = 8.4e-97
Identities = 64/104 (61%), Positives = 82/104 (78%)
Query: 31 LDLDIEWNDDVTHXXXXXXXXXXXXXXXLCNKLCTYTITQKEFMNQHWYHCHTCKMIDGV 90
+++D +W +++ LCNKLCT+TITQKEFMNQHWYHCHTCKM+DGV
Sbjct: 462 IEVDSDWVEELA-VEEEDSQAEDSDEDSLCNKLCTFTITQKEFMNQHWYHCHTCKMVDGV 520
Query: 91 GVCSVCAQVCHKNHDITYSKFGNFFCDCGAKENGQCLALTKRNP 134
GVC+VCA+VCHK+H+I+Y+K+G+FFCDCGAKE+G CLAL KR P
Sbjct: 521 GVCTVCAKVCHKDHEISYAKYGSFFCDCGAKEDGSCLALVKRTP 564
Score = 41 (19.5 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 48/216 (22%), Positives = 89/216 (41%)
Query: 253 LREKLGPVSPNIFDRIWEILPPILEVFKEMTPALKAGIAKTS---PVGVFDRV-SHGLFQ 308
LR+ + + ++F+ ++L E+ + +K IA T+ P VFD + L +
Sbjct: 1986 LRQYVKGHAADVFEAYTQLLT---EMVLRLPYQIKK-IADTNSRIPPPVFDHSWFYFLSE 2041
Query: 309 -LQNMQHKFVEN-TDNLMVPVMGSQEGAFENVR-MNLNGDQGQTIRQLISNNSIRRTCMC 365
L Q FV L++ + GS+E + +R ++ + I++L+ I
Sbjct: 2042 YLMIQQTPFVRRQVRKLLLFICGSKE-KYRQLRDLHTLDSHVRGIKKLLEEQGIFLRASV 2100
Query: 366 ILSSPQSKRQHLVAVS---HEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILS 422
+ +S S Q+ +S H K + + Q K L L VS ++
Sbjct: 2101 VTASSGSALQYDTLISLMEHLKACAEIAAQRTVNWQRFCIKDDSVLYFLLQVSF---LVD 2157
Query: 423 VEANPCNEELL--AVCGLKECIVFSFTSGMSQATDS 456
+P +LL A+CG K + ++G S + S
Sbjct: 2158 EGVSPVLLQLLSCALCGSKVLAALAASAGSSSTSSS 2193
Score = 37 (18.1 bits), Expect = 3.2e-35, Sum P(2) = 3.2e-35
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 249 KIENLREKLGPVSPNIFDRIW-EILPPILEVFKEMTPALKAGIAK 292
+I+ + + + P +FD W L L + + TP ++ + K
Sbjct: 2015 QIKKIADTNSRIPPPVFDHSWFYFLSEYLMI--QQTPFVRRQVRK 2057
>UNIPROTKB|E2RF02 [details] [associations]
symbol:UBR4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR003126 Pfam:PF02207 PROSITE:PS51157
SUPFAM:SSF50978 GO:GO:0008270 GO:GO:0016567 GO:GO:0004842 KO:K10691
InterPro:IPR025704 Pfam:PF13764 GeneTree:ENSGT00600000084471
OMA:GHQGFGV CTD:23352 EMBL:AAEX03001814 EMBL:AAEX03001815
RefSeq:XP_853095.1 Ensembl:ENSCAFT00000024347 GeneID:478211
KEGG:cfa:478211 NextBio:20853569 Uniprot:E2RF02
Length = 5181
Score = 623 (224.4 bits), Expect = 9.6e-97, Sum P(2) = 9.6e-97
Identities = 127/223 (56%), Positives = 160/223 (71%)
Query: 273 PPILEVFKEMTPALKAGIAKTSPVGVFDRVSHGLFQLQNMQHKFVENTDNLMVPVMGSQE 332
P +L++ + A++ + S VG R L +L + K VE TD LMVP +GSQE
Sbjct: 1807 PLVLDMLNFLMDAIQTNFQQASAVGSSSRAQQALRELHTVD-KVVEMTDQLMVPTLGSQE 1865
Query: 333 GAFENVRMNLNGDQGQTIRQLISNNSIRRTCMCILSSPQSKRQHLVAVSHEKGKITLLQL 392
GAFENVRMN +GDQGQTIRQLIS + +RR MC+LSSP +RQHL AVSHEKGKIT+LQL
Sbjct: 1866 GAFENVRMNYSGDQGQTIRQLISAHVLRRVAMCVLSSPHGRRQHL-AVSHEKGKITVLQL 1924
Query: 393 SGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTSGMSQ 452
S LLKQ DSSKRKLTL +LAS +P T+LS+ NPC E+ LAVCGLK+C V +F+S S
Sbjct: 1925 SALLKQADSSKRKLTLTRLASAPVPFTVLSLTGNPCKEDYLAVCGLKDCHVLTFSSSGS- 1983
Query: 453 ATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQL 495
+D + ++P T N+IIKA+W+PG Q+ LAIVTA +KIY L
Sbjct: 1984 VSDHLVLHPQLATGNFIIKAVWLPGSQTELAIVTADFVKIYDL 2026
Score = 398 (145.2 bits), Expect = 9.6e-97, Sum P(2) = 9.6e-97
Identities = 64/104 (61%), Positives = 82/104 (78%)
Query: 31 LDLDIEWNDDVTHXXXXXXXXXXXXXXXLCNKLCTYTITQKEFMNQHWYHCHTCKMIDGV 90
+++D +W +++ LCNKLCT+TITQKEFMNQHWYHCHTCKM+DGV
Sbjct: 1629 IEVDSDWVEELA-VEEEDSQAEDSDEDSLCNKLCTFTITQKEFMNQHWYHCHTCKMVDGV 1687
Query: 91 GVCSVCAQVCHKNHDITYSKFGNFFCDCGAKENGQCLALTKRNP 134
GVC+VCA+VCHK+H+I+Y+K+G+FFCDCGAKE+G CLAL KR P
Sbjct: 1688 GVCTVCAKVCHKDHEISYAKYGSFFCDCGAKEDGSCLALVKRTP 1731
Score = 45 (20.9 bits), Expect = 8.0e-36, Sum P(2) = 8.0e-36
Identities = 49/216 (22%), Positives = 90/216 (41%)
Query: 253 LREKLGPVSPNIFDRIWEILPPILEVFKEMTPALKAGIAKTS---PVGVFDRV-SHGLFQ 308
LR+ + + ++F+ ++L E+ + +K IA T+ P VFD + L +
Sbjct: 3139 LRQYVKGHAADVFEAYTQLLT---EMVLRLPYQIKK-IADTNSRIPPPVFDHSWFYFLSE 3194
Query: 309 -LQNMQHKFVEN-TDNLMVPVMGSQEGAFENVR-MNLNGDQGQTIRQLISNNSIRRTCMC 365
L Q FV L++ + GS+E + +R ++ + I++L+ I
Sbjct: 3195 YLMIQQTPFVRRQVRKLLLFICGSKE-KYRQLRDLHTLDSHVRGIKKLLEEQGIFLRASV 3253
Query: 366 ILSSPQSKRQHLVAVS---HEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILS 422
+ +S S Q+ +S H K + + Q K L L VS ++
Sbjct: 3254 VTASSGSALQYDTLISLMEHLKACAEIAAQRTVNWQKFCIKDDSVLYFLLQVSF---LVD 3310
Query: 423 VEANPCNEELL--AVCGLKECIVFSFTSGMSQATDS 456
+P +LL A+CG K + ++G S A+ S
Sbjct: 3311 EGVSPVLLQLLSCALCGSKVLAALAASAGSSSASSS 3346
Score = 37 (18.1 bits), Expect = 5.6e-35, Sum P(2) = 5.6e-35
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 249 KIENLREKLGPVSPNIFDRIW-EILPPILEVFKEMTPALKAGIAK 292
+I+ + + + P +FD W L L + + TP ++ + K
Sbjct: 3168 QIKKIADTNSRIPPPVFDHSWFYFLSEYLMI--QQTPFVRRQVRK 3210
>MGI|MGI:1916366 [details] [associations]
symbol:Ubr4 "ubiquitin protein ligase E3 component
n-recognin 4" species:10090 "Mus musculus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR003126 Pfam:PF02207 PROSITE:PS51157 UniPathway:UPA00143
MGI:MGI:1916366 GO:GO:0016021 GO:GO:0005634 GO:GO:0005737
GO:GO:0005856 GO:GO:0046872 GO:GO:0008270 GO:GO:0004842
eggNOG:NOG236675 KO:K10691 InterPro:IPR025704 Pfam:PF13764
GeneTree:ENSGT00600000084471 OMA:GHQGFGV CTD:23352
HOVERGEN:HBG058328 OrthoDB:EOG49W2DG ChiTaRS:UBR4 EMBL:AK044277
EMBL:AK080556 EMBL:AK082231 EMBL:AK083644 EMBL:AK086097
EMBL:AL807833 EMBL:AB093242 EMBL:BC040468 EMBL:BC051096
EMBL:BC057625 EMBL:BC059890 EMBL:BC094329 IPI:IPI00378681
IPI:IPI00606977 IPI:IPI00648709 IPI:IPI00845523 IPI:IPI00845583
RefSeq:NP_001153791.1 UniGene:Mm.271956 ProteinModelPortal:A2AN08
SMR:A2AN08 IntAct:A2AN08 MINT:MINT-1353605 STRING:A2AN08
PhosphoSite:A2AN08 PaxDb:A2AN08 PRIDE:A2AN08
Ensembl:ENSMUST00000097822 Ensembl:ENSMUST00000129779
Ensembl:ENSMUST00000147999 Ensembl:ENSMUST00000165860 GeneID:69116
KEGG:mmu:69116 UCSC:uc008vmi.1 UCSC:uc008vmj.2 UCSC:uc008vmm.2
InParanoid:A2AN08 NextBio:328632 Bgee:A2AN08 Genevestigator:A2AN08
Uniprot:A2AN08
Length = 5180
Score = 622 (224.0 bits), Expect = 1.2e-96, Sum P(2) = 1.2e-96
Identities = 127/223 (56%), Positives = 160/223 (71%)
Query: 273 PPILEVFKEMTPALKAGIAKTSPVGVFDRVSHGLFQLQNMQHKFVENTDNLMVPVMGSQE 332
P +L++ + A++ + S VG R L +L + K VE TD LMVP +GSQE
Sbjct: 1807 PLVLDMLSFLMDAIQTNFQQASAVGSSSRAQQALSELHTVD-KGVEMTDQLMVPTLGSQE 1865
Query: 333 GAFENVRMNLNGDQGQTIRQLISNNSIRRTCMCILSSPQSKRQHLVAVSHEKGKITLLQL 392
GAFENVRMN +GDQGQTIRQLIS + +RR MC+LSSP +RQHL AVSHEKGKIT+LQL
Sbjct: 1866 GAFENVRMNYSGDQGQTIRQLISAHVLRRVAMCVLSSPHGRRQHL-AVSHEKGKITVLQL 1924
Query: 393 SGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTSGMSQ 452
S LLKQ DSSKRKLTL +LAS +P T+LS+ NPC E+ LAVCGLK+C V +F+S S
Sbjct: 1925 SALLKQADSSKRKLTLTRLASAPVPFTVLSLTGNPCKEDYLAVCGLKDCHVLTFSSSGS- 1983
Query: 453 ATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQL 495
+D + ++P T N+IIKA+W+PG Q+ LAIVTA +KIY L
Sbjct: 1984 VSDHLVLHPQLATGNFIIKAVWLPGSQTELAIVTADFVKIYDL 2026
Score = 398 (145.2 bits), Expect = 1.2e-96, Sum P(2) = 1.2e-96
Identities = 64/104 (61%), Positives = 82/104 (78%)
Query: 31 LDLDIEWNDDVTHXXXXXXXXXXXXXXXLCNKLCTYTITQKEFMNQHWYHCHTCKMIDGV 90
+++D +W +++ LCNKLCT+TITQKEFMNQHWYHCHTCKM+DGV
Sbjct: 1629 IEVDSDWVEELA-VEEEDSQAEDSDEDSLCNKLCTFTITQKEFMNQHWYHCHTCKMVDGV 1687
Query: 91 GVCSVCAQVCHKNHDITYSKFGNFFCDCGAKENGQCLALTKRNP 134
GVC+VCA+VCHK+H+I+Y+K+G+FFCDCGAKE+G CLAL KR P
Sbjct: 1688 GVCTVCAKVCHKDHEISYAKYGSFFCDCGAKEDGSCLALVKRTP 1731
Score = 38 (18.4 bits), Expect = 4.4e-35, Sum P(2) = 4.4e-35
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 249 KIENLREKLGPVSPNIFDRIW-EILPPILEVFKEMTPALKAGIAK 292
+I+ + + + P +FD W L L + + TP ++ + K
Sbjct: 3167 QIKKIADTSSRIPPPVFDHSWFYFLSEYLMI--QQTPFVRRQVRK 3209
>UNIPROTKB|F1P2G5 [details] [associations]
symbol:UBR4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR003126 Pfam:PF02207 PROSITE:PS51157
SUPFAM:SSF50978 GO:GO:0008270 GO:GO:0016567 GO:GO:0004842
InterPro:IPR025704 Pfam:PF13764 GeneTree:ENSGT00600000084471
OMA:GHQGFGV EMBL:AADN02040698 EMBL:AADN02040699 EMBL:AADN02040700
EMBL:AADN02040701 EMBL:AADN02040702 EMBL:AADN02040703
EMBL:AADN02040704 EMBL:AADN02040705 EMBL:AADN02040706
EMBL:AADN02040707 EMBL:AADN02040708 EMBL:AADN02040709
IPI:IPI00573705 Ensembl:ENSGALT00000006223 Uniprot:F1P2G5
Length = 5201
Score = 622 (224.0 bits), Expect = 1.2e-96, Sum P(2) = 1.2e-96
Identities = 127/223 (56%), Positives = 160/223 (71%)
Query: 273 PPILEVFKEMTPALKAGIAKTSPVGVFDRVSHGLFQLQNMQHKFVENTDNLMVPVMGSQE 332
P +LE+ + A++ + S +G R L +L + K VE TD LMVP +GSQE
Sbjct: 1817 PLVLEMLNFLMDAIQINFQQASAMGSSSRAQQALNELHTLD-KSVEMTDQLMVPTLGSQE 1875
Query: 333 GAFENVRMNLNGDQGQTIRQLISNNSIRRTCMCILSSPQSKRQHLVAVSHEKGKITLLQL 392
GAFENVRMN +GDQGQTIRQLIS + +RR MC+LSSP +RQHL AVSHEKGKIT+LQL
Sbjct: 1876 GAFENVRMNYSGDQGQTIRQLISAHVLRRVAMCVLSSPHGRRQHL-AVSHEKGKITVLQL 1934
Query: 393 SGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTSGMSQ 452
S LLKQ DSSKRKLTL +LAS +P T+LS+ NPC E+ LAVCGLK+C V +F+S S
Sbjct: 1935 SALLKQADSSKRKLTLTRLASAPVPFTVLSLTGNPCKEDYLAVCGLKDCHVLTFSSSGS- 1993
Query: 453 ATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQL 495
+D + ++P T N+IIKA+W+PG Q+ LAIVTA +KIY L
Sbjct: 1994 VSDHLVLHPQLATGNFIIKAVWLPGSQTELAIVTADFVKIYDL 2036
Score = 398 (145.2 bits), Expect = 1.2e-96, Sum P(2) = 1.2e-96
Identities = 64/104 (61%), Positives = 82/104 (78%)
Query: 31 LDLDIEWNDDVTHXXXXXXXXXXXXXXXLCNKLCTYTITQKEFMNQHWYHCHTCKMIDGV 90
+++D +W +++ LCNKLCT+TITQKEFMNQHWYHCHTCKM+DGV
Sbjct: 1639 IEVDSDWVEELA-VEEEDSQAEDSDEDSLCNKLCTFTITQKEFMNQHWYHCHTCKMVDGV 1697
Query: 91 GVCSVCAQVCHKNHDITYSKFGNFFCDCGAKENGQCLALTKRNP 134
GVC+VCA+VCHK+H+I+Y+K+G+FFCDCGAKE+G CLAL KR P
Sbjct: 1698 GVCTVCAKVCHKDHEISYAKYGSFFCDCGAKEDGSCLALVKRTP 1741
Score = 37 (18.1 bits), Expect = 5.6e-35, Sum P(2) = 5.6e-35
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 249 KIENLREKLGPVSPNIFDRIW-EILPPILEVFKEMTPALKAGIAK 292
+I+ + + + P +FD W L L + + TP ++ + K
Sbjct: 3187 QIKKIADTNSRIPPPVFDHSWFYFLSEYLMI--QQTPFVRRQVRK 3229
>UNIPROTKB|E1BHT5 [details] [associations]
symbol:UBR4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR003126 InterPro:IPR016024
Pfam:PF02207 PROSITE:PS51157 SUPFAM:SSF48371 SUPFAM:SSF50978
GO:GO:0008270 GO:GO:0016567 GO:GO:0004842 InterPro:IPR025704
Pfam:PF13764 GeneTree:ENSGT00600000084471 OMA:GHQGFGV
EMBL:DAAA02006530 EMBL:DAAA02006531 IPI:IPI00685802
Ensembl:ENSBTAT00000020277 Uniprot:E1BHT5
Length = 5186
Score = 621 (223.7 bits), Expect = 1.6e-96, Sum P(2) = 1.6e-96
Identities = 126/223 (56%), Positives = 160/223 (71%)
Query: 273 PPILEVFKEMTPALKAGIAKTSPVGVFDRVSHGLFQLQNMQHKFVENTDNLMVPVMGSQE 332
P +L++ + A++ + S VG R L +L + K VE TD LMVP +GSQE
Sbjct: 1810 PLVLDMLSFLMDAIQTNFQQASAVGSSSRAQQALRELHTVD-KAVEMTDQLMVPTLGSQE 1868
Query: 333 GAFENVRMNLNGDQGQTIRQLISNNSIRRTCMCILSSPQSKRQHLVAVSHEKGKITLLQL 392
GAFENVRMN +GDQGQTIRQLIS + +RR MC+LSSP +RQHL AVSHEKGKIT+LQL
Sbjct: 1869 GAFENVRMNYSGDQGQTIRQLISAHVLRRVAMCVLSSPHGRRQHL-AVSHEKGKITVLQL 1927
Query: 393 SGLLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTSGMSQ 452
S LLKQ DSSKRKLTL +LAS +P T+LS+ NPC E+ LAVCGLK+C V +F+S S
Sbjct: 1928 SALLKQADSSKRKLTLTRLASAPVPFTVLSLTGNPCKEDYLAVCGLKDCHVLTFSSSGS- 1986
Query: 453 ATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQL 495
+D + ++P T N+IIKA+W+PG Q+ LAIVTA +K+Y L
Sbjct: 1987 VSDHLVLHPQLATGNFIIKAVWLPGSQTELAIVTADFVKVYDL 2029
Score = 398 (145.2 bits), Expect = 1.6e-96, Sum P(2) = 1.6e-96
Identities = 64/104 (61%), Positives = 82/104 (78%)
Query: 31 LDLDIEWNDDVTHXXXXXXXXXXXXXXXLCNKLCTYTITQKEFMNQHWYHCHTCKMIDGV 90
+++D +W +++ LCNKLCT+TITQKEFMNQHWYHCHTCKM+DGV
Sbjct: 1632 IEVDSDWVEELA-VEEEDSQAEDSDEDSLCNKLCTFTITQKEFMNQHWYHCHTCKMVDGV 1690
Query: 91 GVCSVCAQVCHKNHDITYSKFGNFFCDCGAKENGQCLALTKRNP 134
GVC+VCA+VCHK+H+I+Y+K+G+FFCDCGAKE+G CLAL KR P
Sbjct: 1691 GVCTVCAKVCHKDHEISYAKYGSFFCDCGAKEDGSCLALVKRTP 1734
Score = 42 (19.8 bits), Expect = 5.3e-59, Sum P(2) = 5.3e-59
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 250 IENLREKLGPVSPNIFDRIWEILPPILEVFKEMTPALKAGIAKTSPVG 297
+E+ +E PVSP + + E+ + ++T +SPVG
Sbjct: 170 VEDQKELASPVSPELKQK--EVQ---MNFLNQLTSVFNPRTVASSPVG 212
Score = 41 (19.5 bits), Expect = 2.1e-35, Sum P(2) = 2.1e-35
Identities = 48/216 (22%), Positives = 89/216 (41%)
Query: 253 LREKLGPVSPNIFDRIWEILPPILEVFKEMTPALKAGIAKTS---PVGVFDRV-SHGLFQ 308
LR+ + + ++F+ ++L E+ + +K IA T+ P VFD + L +
Sbjct: 3144 LRQYVKGHAADVFEAYTQLLT---EMVLRLPYQIKK-IADTNSRIPPPVFDHSWFYFLSE 3199
Query: 309 -LQNMQHKFVEN-TDNLMVPVMGSQEGAFENVR-MNLNGDQGQTIRQLISNNSIRRTCMC 365
L Q FV L++ + GS+E + +R ++ + I++L+ I
Sbjct: 3200 YLMIQQTPFVRRQVRKLLLFICGSKE-KYRQLRDLHTLDSHVRGIKKLLEEQGIFLRASV 3258
Query: 366 ILSSPQSKRQHLVAVS---HEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILS 422
+ +S S Q+ +S H K + + Q K L L VS ++
Sbjct: 3259 VTASSGSALQYDTLISLMEHLKACAEIAAQRTVNWQRFCIKDDSVLYFLLQVSF---LVD 3315
Query: 423 VEANPCNEELL--AVCGLKECIVFSFTSGMSQATDS 456
+P +LL A+CG K + ++G S + S
Sbjct: 3316 EGVSPVLLQLLSCALCGSKVLAALAASAGSSSTSSS 3351
Score = 37 (18.1 bits), Expect = 5.6e-35, Sum P(2) = 5.6e-35
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 249 KIENLREKLGPVSPNIFDRIW-EILPPILEVFKEMTPALKAGIAK 292
+I+ + + + P +FD W L L + + TP ++ + K
Sbjct: 3173 QIKKIADTNSRIPPPVFDHSWFYFLSEYLMI--QQTPFVRRQVRK 3215
>FB|FBgn0011230 [details] [associations]
symbol:poe "purity of essence" species:7227 "Drosophila
melanogaster" [GO:0007286 "spermatid development" evidence=IMP]
[GO:0007291 "sperm individualization" evidence=IMP] [GO:0005516
"calmodulin binding" evidence=IDA] [GO:0042066 "perineurial glial
growth" evidence=IGI;IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR003126 Pfam:PF02207
PROSITE:PS51157 EMBL:AE014134 SUPFAM:SSF50978 GO:GO:0046872
GO:GO:0007601 GO:GO:0008270 GO:GO:0016567 GO:GO:0050896
GO:GO:0005516 GO:GO:0007291 GO:GO:0004842 GO:GO:0042066
eggNOG:NOG236675 KO:K10691 InterPro:IPR025704 Pfam:PF13764
InterPro:IPR013993 SMART:SM00396 EMBL:AF096896 EMBL:AF096897
EMBL:Y17920 EMBL:AY118998 PIR:T13719 RefSeq:NP_476986.1
UniGene:Dm.7936 ProteinModelPortal:Q9VLT5 SMR:Q9VLT5 IntAct:Q9VLT5
MINT:MINT-863239 STRING:Q9VLT5 PaxDb:Q9VLT5 PRIDE:Q9VLT5
EnsemblMetazoa:FBtr0079545 EnsemblMetazoa:FBtr0333088 GeneID:46243
KEGG:dme:Dmel_CG14472 CTD:46243 FlyBase:FBgn0011230
GeneTree:ENSGT00600000084471 InParanoid:Q9VLT5 OMA:GHQGFGV
OrthoDB:EOG405QFW PhylomeDB:Q9VLT5 GenomeRNAi:46243 NextBio:838806
Bgee:Q9VLT5 GermOnline:CG14472 Uniprot:Q9VLT5
Length = 5322
Score = 570 (205.7 bits), Expect = 2.3e-86, Sum P(2) = 2.3e-86
Identities = 116/221 (52%), Positives = 152/221 (68%)
Query: 275 ILEVFKEMTPALKAGIAKTSPVGVFDRVSHGLFQLQNMQHKFVENTDNLMVPVMGSQEGA 334
ILE F + P++ S VG R + L +L ++ F + TD LM +GSQEGA
Sbjct: 1940 ILEYFDLLLPSINENCMLYSIVGCHKRATAALERLHLLEQSF-QVTDQLMFATLGSQEGA 1998
Query: 335 FENVRMNLNGDQGQTIRQLISNNSIRRTCMCILSSPQSKRQHLVAVSHEKGKITLLQLSG 394
FENVRMN +GDQGQTI+ L+S+ +RR C LSSP +RQ L AVSHEKGK+T+LQLS
Sbjct: 1999 FENVRMNYSGDQGQTIKHLLSSGVVRRVAFCCLSSPHGRRQQL-AVSHEKGKVTILQLSA 2057
Query: 395 LLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTSGMSQAT 454
LLKQ D+SKRKLTL +L+S + T++S+ ANPCNE+ LAVCGLKEC + +F+S S
Sbjct: 2058 LLKQADASKRKLTLTQLSSAPIACTVISLAANPCNEDCLAVCGLKECHILTFSSSGS-TN 2116
Query: 455 DSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQL 495
+ I +NP E NYI KA+W+PG Q+ LA+VT+ +KIY L
Sbjct: 2117 EHIVVNPQLENGNYIKKAVWLPGSQTLLAVVTSDYVKIYDL 2157
Score = 353 (129.3 bits), Expect = 2.3e-86, Sum P(2) = 2.3e-86
Identities = 64/115 (55%), Positives = 78/115 (67%)
Query: 22 GESEAFPP---PLDLDI-EWNDDVTHXXXXXXXXXXXXXXXLCNKLCTYTITQKEFMNQH 77
G + PP L DI E D++ L NKLCT++ TQKEFMNQH
Sbjct: 1750 GSRQHNPPWDDELQTDIDELYDELAEEGEQDSLLDDSDEDTLNNKLCTFSQTQKEFMNQH 1809
Query: 78 WYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFGNFFCDCGAKENGQCLALTKR 132
WYHCHTC MI+ VGVCSVCA+VCHK HD++Y+K+GNFFCDCGAKE+G C AL++R
Sbjct: 1810 WYHCHTCNMINTVGVCSVCARVCHKGHDVSYAKYGNFFCDCGAKEDGSCQALSRR 1864
Score = 39 (18.8 bits), Expect = 2.9e-31, Sum P(3) = 2.9e-31
Identities = 16/75 (21%), Positives = 30/75 (40%)
Query: 247 QIKIENLREKLGPVSPNIFDRIWEILPPILEVFKEMTPALKAGIAKTSPVGVFDRVSHGL 306
++ I N R GPV+ +L P L + + + + G V D S +
Sbjct: 4111 ELFISNCRLPRGPVTA--------VLHPCLRIMQNLICPVLPGSKPNQKVATTDLCSMKM 4162
Query: 307 FQLQNMQHKFVENTD 321
F+ + ++ N+D
Sbjct: 4163 FEGNTVDYRAWLNSD 4177
Score = 38 (18.4 bits), Expect = 2.9e-31, Sum P(3) = 2.9e-31
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 395 LLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEEL 432
+L++I S +R +L V L + ++ V+ C E L
Sbjct: 4615 MLERIGSLQRISRNRELIQVLLKLFLICVKVRRCQEVL 4652
Score = 38 (18.4 bits), Expect = 3.6e-31, Sum P(3) = 3.6e-31
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 251 ENLREKLGPVSPNIFDRIWEILP 273
E REKL NIF +W ++P
Sbjct: 3574 ERQREKL----LNIFWNLWPLVP 3592
Score = 37 (18.1 bits), Expect = 4.5e-53, Sum P(2) = 4.5e-53
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 261 SPNIFDRIWEI-LPPILEVFKEMTPALKAGI 290
SPN+ +W I LP + ++ +K G+
Sbjct: 1037 SPNLHSLMWSIRLPLASSHYLVVSSLIKQGM 1067
>UNIPROTKB|Q29L39 [details] [associations]
symbol:poe "Protein purity of essence" species:46245
"Drosophila pseudoobscura pseudoobscura" [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0007286 "spermatid development"
evidence=ISS] [GO:0007291 "sperm individualization" evidence=ISS]
InterPro:IPR003126 Pfam:PF02207 PROSITE:PS51157 GO:GO:0007399
GO:GO:0046872 GO:GO:0007601 GO:GO:0008270 GO:GO:0016567
GO:GO:0050896 GO:GO:0005516 GO:GO:0007291 EMBL:CH379061
GO:GO:0004842 eggNOG:NOG236675 KO:K10691 InterPro:IPR025704
Pfam:PF13764 InterPro:IPR013993 SMART:SM00396 OMA:GHQGFGV
OrthoDB:EOG405QFW RefSeq:XP_001355926.1 GeneID:4816331
KEGG:dpo:Dpse_GA13010 FlyBase:FBgn0073048 InParanoid:Q29L39
Uniprot:Q29L39
Length = 5381
Score = 570 (205.7 bits), Expect = 6.3e-86, Sum P(2) = 6.3e-86
Identities = 117/221 (52%), Positives = 152/221 (68%)
Query: 275 ILEVFKEMTPALKAGIAKTSPVGVFDRVSHGLFQLQNMQHKFVENTDNLMVPVMGSQEGA 334
ILE F + P+++ S VG R + L +L ++ F + TD LM +GSQEGA
Sbjct: 1971 ILEYFDVLLPSIRENCTLYSIVGCHRRATAALQRLHQLEQSF-QITDQLMFATLGSQEGA 2029
Query: 335 FENVRMNLNGDQGQTIRQLISNNSIRRTCMCILSSPQSKRQHLVAVSHEKGKITLLQLSG 394
FENVRMN +GDQGQTI+ L+++ +IRR C LSSP +RQ L AVSHEKGK+T+LQLS
Sbjct: 2030 FENVRMNYSGDQGQTIKHLLTSGTIRRVAFCCLSSPHGRRQQL-AVSHEKGKVTILQLSA 2088
Query: 395 LLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTSGMSQAT 454
LLKQ D+SKRKLTL +L+S + T+LS+ ANPCNE+ LAVCGLKEC V +F+S S
Sbjct: 2089 LLKQADASKRKLTLTQLSSAPIACTVLSLAANPCNEDCLAVCGLKECHVLTFSSSGS-TN 2147
Query: 455 DSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQL 495
+ I I P E N++ KA+W+PG Q+ LAIVT +KIY L
Sbjct: 2148 EHIVITPQLENGNFLKKAMWLPGSQTLLAIVTTDYVKIYDL 2188
Score = 349 (127.9 bits), Expect = 6.3e-86, Sum P(2) = 6.3e-86
Identities = 56/74 (75%), Positives = 67/74 (90%)
Query: 59 LCNKLCTYTITQKEFMNQHWYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFGNFFCDC 118
L NKLCT++ TQKEFMNQHWYHCHTC MI+ VGVCSVCA+VCHK HD++Y+K+GNFFCDC
Sbjct: 1812 LNNKLCTFSQTQKEFMNQHWYHCHTCNMINTVGVCSVCARVCHKGHDVSYAKYGNFFCDC 1871
Query: 119 GAKENGQCLALTKR 132
GAKE+G C AL++R
Sbjct: 1872 GAKEDGSCQALSRR 1885
Score = 43 (20.2 bits), Expect = 3.8e-31, Sum P(3) = 3.8e-31
Identities = 27/116 (23%), Positives = 53/116 (45%)
Query: 269 WEILPPILEVFKEM---TPALKAGIAKTSPVGVFDRVSHGLFQLQNMQHKFVENTDNLMV 325
++++P ++ + E+ TP L PV + V GL Q + + H VE +
Sbjct: 2798 YDLVPDLMRIVLELHKITPDLD------EPVNI---VRRGLCQPETIVHCLVEIMYGFAL 2848
Query: 326 PVMGSQEGAFENVRMNLNGDQGQTIRQLISNNSIRRTCMCILSSPQSKRQHLVAVS 381
G Q G ++L T+ IS+++ + + +L SP+ KR+ + A++
Sbjct: 2849 ADPG-QVGRMTQYFIDLLKHDA-TV---ISHSA--KEALILLLSPRMKRRKVAAIA 2897
Score = 37 (18.1 bits), Expect = 4.7e-53, Sum P(2) = 4.7e-53
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 259 PVSPNIFDRIWEILPPILEVFKE 281
P+S I D ++L +EVF+E
Sbjct: 203 PLSEEITDCTEQLLAANVEVFQE 225
Score = 37 (18.1 bits), Expect = 3.8e-31, Sum P(3) = 3.8e-31
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 395 LLKQIDSSKRKLTLIKLASVSLPITILSVEANPCNEEL 432
+L +I S +R +L V L + ++ V+ C E L
Sbjct: 4674 MLDRIGSLQRISRQRELIQVLLKLFLICVKVRRCQEVL 4711
>DICTYBASE|DDB_G0283893 [details] [associations]
symbol:DDB_G0283893 "unknown" species:44689
"Dictyostelium discoideum" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR000433
InterPro:IPR003126 InterPro:IPR016024 Pfam:PF00569 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS51157 SMART:SM00291 UniPathway:UPA00143
dictyBase:DDB_G0283893 SUPFAM:SSF48371 SUPFAM:SSF50978
GO:GO:0046872 GO:GO:0008270 GO:GO:0004842 InterPro:IPR003903
SMART:SM00726 PROSITE:PS50330 EMBL:AAFI02000057 eggNOG:NOG236675
KO:K10691 InterPro:IPR025704 Pfam:PF13764 RefSeq:XP_638906.2
PRIDE:Q54QG5 EnsemblProtists:DDB0267140 GeneID:8624303
KEGG:ddi:DDB_G0283893 OMA:ESTECIT Uniprot:Q54QG5
Length = 5875
Score = 233 (87.1 bits), Expect = 5.4e-30, Sum P(2) = 5.4e-30
Identities = 37/76 (48%), Positives = 52/76 (68%)
Query: 59 LCNKLCTYTITQKEFMNQHWYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFGNFFCDC 118
L +K+CTYT T+ ++++QHWY C+TC + G CSVC +VCHK H ++YS++ FFCDC
Sbjct: 2039 LSSKVCTYTFTKNDYIDQHWYFCYTCGLKFSEGCCSVCVKVCHKGHQVSYSRYSRFFCDC 2098
Query: 119 GAK--ENGQCLALTKR 132
GA + C AL R
Sbjct: 2099 GAGAGKGNPCKALKPR 2114
Score = 192 (72.6 bits), Expect = 5.4e-30, Sum P(2) = 5.4e-30
Identities = 68/245 (27%), Positives = 120/245 (48%)
Query: 263 NIFDRIWEILPPILEVFKEM-TPALKA-GIAKTSPVGVFDRVSHGLFQLQNMQHKFVENT 320
NI ++ E+ P ++E++K++ T +K + ++ + VF+ S Q++ + + +
Sbjct: 2235 NIISKLSELYPKLIEMYKKVQTDLIKPQSDSNSNKLEVFEESS-----TQSISSREIISK 2289
Query: 321 DNLMVPVMGSQEGAFENVRMNLNGDQGQTIRQLISNNSIRRTCMCILSSPQSKRQHLVAV 380
++ S+ G FE ++ L G +G ++ +S+ I+R + S + L+A+
Sbjct: 2290 TDIFTTKKVSKNGTFE-AKLKLEGVEGNQLKTFLSSGPIQRKAIA------STSKGLLAI 2342
Query: 381 SHEKGKITLLQLSGLLK---QIDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCG 437
+ E ++L S +L Q+D L K +SV+ PI +S+ NP NE LAV G
Sbjct: 2343 A-EGDSVSLFNSSKILDDDAQLDKHSFSKALSK-SSVAYPI--VSMVFNPLNERFLAVVG 2398
Query: 438 LKECIVFSFTSGMSQATDSITINPHCETSN---YIIKALWIPGRQSTLAIVTALNIKIYQ 494
KE + + + D + I+ + YIIK WI G Q LAIVT IKIY
Sbjct: 2399 FKEVKILTINQ-KDEIVDQLVIDLSLDALGETIYIIKVEWIIGSQVELAIVTNEFIKIYD 2457
Query: 495 LRPES 499
L ++
Sbjct: 2458 LSKDN 2462
Score = 39 (18.8 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 356 NNSIRRTCMCILSSPQSKRQHLVAVSHE--KGKITLLQLSGLLKQIDSSKRK 405
+N + T + ++S +S ++ +G I + L LL D KR+
Sbjct: 3410 SNQLVTTLVNLISKHKSNLSKFLSTKSNNLEGDILIFSLLSLLLDSDEQKRQ 3461
>TAIR|locus:2076487 [details] [associations]
symbol:BIG "BIG" species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0048283
"indeterminate inflorescence morphogenesis" evidence=IMP]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0009926
"auxin polar transport" evidence=IDA] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0009826
"unidimensional cell growth" evidence=IMP] [GO:0048281
"inflorescence morphogenesis" evidence=IMP] [GO:0009620 "response
to fungus" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0009640
"photomorphogenesis" evidence=IMP] InterPro:IPR000433
InterPro:IPR003126 Pfam:PF00569 Pfam:PF02207 PROSITE:PS01357
PROSITE:PS01360 PROSITE:PS50135 PROSITE:PS50865 PROSITE:PS51157
SMART:SM00291 GO:GO:0016021 GO:GO:0005829 GO:GO:0009506
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0009926 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016020
GO:GO:0046872 GO:GO:0008270 GO:GO:0009640 GO:GO:0016567
GO:GO:0009826 GO:GO:0009620 GO:GO:0010311 EMBL:AC009755
GO:GO:0004842 EMBL:AF507018 IPI:IPI00528496 RefSeq:NP_186875.2
UniGene:At.46446 STRING:Q9SRU2 PaxDb:Q9SRU2 PRIDE:Q9SRU2
GeneID:820398 KEGG:ath:AT3G02260 TAIR:At3g02260 eggNOG:NOG236675
InParanoid:Q9SRU2 KO:K10691 OMA:CCKIREN Genevestigator:Q9SRU2
GO:GO:0048281 InterPro:IPR025704 Pfam:PF13764 Uniprot:Q9SRU2
Length = 5098
Score = 219 (82.2 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 38/79 (48%), Positives = 49/79 (62%)
Query: 59 LCNKLCTYTITQKEFMNQHWYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFGNFFCDC 118
L +K+CT+T + FM QHWY C+TC + G CSVCA+VCH+ H + YS+ FFCDC
Sbjct: 1570 LASKVCTFTSSGSNFMEQHWYFCYTCDLTVSKGCCSVCAKVCHRGHRVVYSRSSRFFCDC 1629
Query: 119 GAK----ENGQCLALTKRN 133
GA + QCL K N
Sbjct: 1630 GAGGVRGSSCQCLKPRKYN 1648
Score = 115 (45.5 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 52/230 (22%), Positives = 107/230 (46%)
Query: 275 ILEVFKEMTPALKAGIAKTSPVGVFDRVSHGLFQLQNMQHKFVENTDNLMVPVMGSQEGA 334
+LE+F + P++ + + S + +V+ G ++ + +TD L + + G+
Sbjct: 1717 VLELFSSLLPSITS--KRDSGLSKEKQVNLGKDKVLSF------DTDLLQLK-KAYKSGS 1767
Query: 335 FENVRMNLNGDQGQTIRQLISNNSIRRTCMCILSSPQSKRQHLVAVSHEKGKITLLQLSG 394
+ +++ + + ++ L++N S+ ++ + + S R L AV E K+ + +
Sbjct: 1768 LD-LKIKADYTNSKDLKSLLANGSLVKSLLSV-----SVRGRL-AVG-EGDKVAIFDVGQ 1819
Query: 395 LLKQ-----IDSSKRKLTLIKLASVSLPITILSVEANPCNEELLAVCGLKECIVFSFTSG 449
L+ Q I++ K + + V I LS NP E LAV GL++C + +
Sbjct: 1820 LIGQATIAPINADKANVKPLSRNIVRFEIVHLSF--NPVVENYLAVAGLEDCQILTLNH- 1876
Query: 450 MSQATDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLRPES 499
+ D + + + + +I + W+PG Q L +VT +KIY L +S
Sbjct: 1877 RGEVIDRLAVELALQGA-FIRRIDWVPGSQVQLMVVTNKFVKIYDLSQDS 1925
Score = 43 (20.2 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 378 VAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITIL 421
VAV H K + +G SSK L +KL SV L +++L
Sbjct: 4539 VAVKHIKEIFAITGQTGF----KSSKEWLLALKLPSVPLILSML 4578
Score = 40 (19.1 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 401 SSKRKLTLIKLASVSLPITILSVEANPCNEELL 433
SS R+ LI L LP T+ + E++ ELL
Sbjct: 3965 SSPRRYRLINLLIGLLPATLAAGESSAEYFELL 3997
>UNIPROTKB|B9G2A8 [details] [associations]
symbol:LOC_Os09g07294 "Auxin transport protein BIG"
species:39947 "Oryza sativa Japonica Group" [GO:0009826
"unidimensional cell growth" evidence=ISS] [GO:0009926 "auxin polar
transport" evidence=ISS] InterPro:IPR000433 InterPro:IPR003126
Pfam:PF00569 PROSITE:PS01357 PROSITE:PS01360 PROSITE:PS50135
PROSITE:PS50865 PROSITE:PS51157 SMART:SM00291 GO:GO:0016021
GO:GO:0007275 GO:GO:0009734 GO:GO:0009926 GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 GO:GO:0009826 GO:GO:0004842
EMBL:AP008215 EMBL:CM000146 InterPro:IPR025704 Pfam:PF13764
EMBL:AP005571 EMBL:AP005587 RefSeq:NP_001062664.1 UniGene:Os.5893
GeneID:4346497 KEGG:osa:4346497 Gramene:B9G2A8 eggNOG:NOG258333
HOGENOM:HOG000029784 Uniprot:B9G2A8
Length = 4965
Score = 215 (80.7 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 36/76 (47%), Positives = 45/76 (59%)
Query: 59 LCNKLCTYTITQKEFMNQHWYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFGNFFCDC 118
L K+CT+T + FM QHWY C+TC + G CSVCA+VCH+ H + YS+ FFCDC
Sbjct: 1428 LATKVCTFTSSGSNFMEQHWYFCYTCDLTVSKGCCSVCAKVCHQGHRVVYSRSSRFFCDC 1487
Query: 119 GAK--ENGQCLALTKR 132
GA C L R
Sbjct: 1488 GAGGVRGSSCQCLKPR 1503
Score = 103 (41.3 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 39/166 (23%), Positives = 80/166 (48%)
Query: 337 NVRMNLNGDQGQTIRQLISNNSIRRTCMCILSSPQSKRQHLVAVSHEKGKITLLQLSGLL 396
++++ + + ++ ++N S+ ++ + I S + K +AV E K+ + + ++
Sbjct: 1628 DLKIKADYPNSRELKSHLANGSLTKSLLSI--SIRGK----LAVG-EGDKVAIFDVGQII 1680
Query: 397 KQIDSSK--RKLTLIKLASVSLP-ITILSVEANPCNEELLAVCGLKECIVFSFTSGMSQA 453
Q ++ T +K S ++ I+ + NP E L+V G ++C V + S +
Sbjct: 1681 GQPTAAPITADKTNVKPLSRNIVRFEIVHLIFNPLVEHYLSVAGYEDCQVLTLNS-RGEV 1739
Query: 454 TDSITINPHCETSNYIIKALWIPGRQSTLAIVTALNIKIYQLRPES 499
TD + I + + YI W+PG Q L +VT +KIY L ++
Sbjct: 1740 TDRLAIELALQGA-YIRCVEWVPGSQVQLMVVTNKFVKIYDLSQDN 1784
Score = 40 (19.1 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 365 CI-LSSPQSKRQHL-VAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSL 416
CI LS P+ L V + + ++ +L+L L + S+R+L L+K V L
Sbjct: 1550 CIKLSVPKGFSDELPVFLKNLDVEVRMLELCKKLLPMILSQRELNLLKDRKVFL 1603
Score = 39 (18.8 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 377 LVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKL 411
LV + K + +SGL K + KR+ +L L
Sbjct: 3972 LVESTANKRQFIRACISGLQKHVKEKKRRTSLFIL 4006
>WB|WBGene00016650 [details] [associations]
symbol:C44E4.1 species:6239 "Caenorhabditis elegans"
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR003126
InterPro:IPR004190 Pfam:PF02207 Pfam:PF02916 PROSITE:PS51157
GO:GO:0006260 GO:GO:0008270 GO:GO:0016567 EMBL:FO080862
GO:GO:0004842 eggNOG:NOG236675 InterPro:IPR025704 Pfam:PF13764
InterPro:IPR013993 SMART:SM00396 GeneTree:ENSGT00600000084471
PIR:T30949 PIR:T30950 UniGene:Cel.18350 STRING:O01808 PaxDb:O01808
EnsemblMetazoa:C44E4.1a UCSC:C44E4.1b.1 CTD:172068
WormBase:C44E4.1a HOGENOM:HOG000113914 InParanoid:O01808
NextBio:873879 ArrayExpress:O01808 Uniprot:O01808
Length = 4213
Score = 228 (85.3 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 35/61 (57%), Positives = 46/61 (75%)
Query: 64 CTYTITQKEFMNQHWYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFGNFFCDCGAKEN 123
CTY T + ++ QHWY+C+TC M++ GVCSVCA CH+ HD+ YSK G+FFCDCG K+
Sbjct: 1216 CTYKSTGRAYVTQHWYNCYTCNMMESEGVCSVCAINCHRGHDLAYSKKGSFFCDCGEKKC 1275
Query: 124 G 124
G
Sbjct: 1276 G 1276
Score = 48 (22.0 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 27/108 (25%), Positives = 46/108 (42%)
Query: 324 MVPVMGSQEGAFENVRMNLNGDQGQTIRQLISN-----NSI---RRTCMCILSSPQSKRQ 375
+V + S+ E +R LNGD Q + +L+S+ SI R C+ +S S
Sbjct: 2636 LVAMTQSEISTIEKIRNTLNGDGYQGMYKLMSDLGLGWKSINFDRNPCLVCFTSKGS--H 2693
Query: 376 HLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSLPITILSV 423
+V ++ K I + + K I + + IKL + +I V
Sbjct: 2694 DVVKMTSIKSDIRYSANTIIYKLISNYEVSKVTIKLTELKKSKSIKKV 2741
Score = 44 (20.5 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 13/42 (30%), Positives = 27/42 (64%)
Query: 375 QHLVAVSHEKGKITLLQLSGLLKQIDSSKRKLTLIKLASVSL 416
QH+ + E+G+ + +++ LL +++++K KLT + A SL
Sbjct: 2872 QHITCDA-ERGQC-VQEITQLLIKMETTKTKLTGYRAACESL 2911
Score = 42 (19.8 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 397 KQIDSSKRKLTLIKLASVSLPITILSVEANPCN--EELLAVCG 437
++I+S KR+ LI +A++ I I + + N EE++ G
Sbjct: 1531 REIESDKRRRQLIAVATMQY-IRIYDLTLHETNFVEEMVLPAG 1572
Score = 39 (18.8 bits), Expect = 9.4e-14, Sum P(2) = 9.4e-14
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 354 ISNNSIRRTCMCILSSPQSKRQHLVAVS 381
++NN + R C +R+ L+AV+
Sbjct: 1519 MNNNPVVRAKFCREIESDKRRRQLIAVA 1546
>DICTYBASE|DDB_G0292302 [details] [associations]
symbol:DDB_G0292302 species:44689 "Dictyostelium
discoideum" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001810 InterPro:IPR003126 Pfam:PF02207 PROSITE:PS51157
SMART:SM00256 dictyBase:DDB_G0292302 GO:GO:0008270 SUPFAM:SSF81383
GO:GO:0016567 eggNOG:NOG12793 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0004842 EMBL:AAFI02000189 InterPro:IPR006633
InterPro:IPR022441 SMART:SM00722 TIGRFAMs:TIGR03804
RefSeq:XP_629688.1 ProteinModelPortal:Q54DF3
EnsemblProtists:DDB0184314 GeneID:8628604 KEGG:ddi:DDB_G0292302
InParanoid:Q54DF3 OMA:RANATIC Uniprot:Q54DF3
Length = 933
Score = 164 (62.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 29/74 (39%), Positives = 42/74 (56%)
Query: 59 LCNKLCTYTITQKEFMNQHWYHCHTC---KMIDG---VGVCSVCAQVCHKNHDITYSKFG 112
L +CT + T++ + Q+WY C TC + I G + VC CA+ CH HDI K+G
Sbjct: 823 LQESMCTLSFTREYYHAQYWYECKTCSEPRKILGKSEIAVCEECAKKCHAGHDIGVRKYG 882
Query: 113 NFFCDCGAKENGQC 126
+F+CDCG + C
Sbjct: 883 HFYCDCGQQLTSPC 896
>UNIPROTKB|B5MCV6 [details] [associations]
symbol:FBXO11 "F-box only protein 11" species:9606 "Homo
sapiens" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA]
InterPro:IPR003126 Pfam:PF02207 PROSITE:PS51157 GO:GO:0008270
GO:GO:0016567 GO:GO:0007605 GO:GO:0004842 EMBL:AC006509
EMBL:AC079807 HGNC:HGNC:13590 ChiTaRS:FBXO11 IPI:IPI00893849
ProteinModelPortal:B5MCV6 SMR:B5MCV6 STRING:B5MCV6
Ensembl:ENST00000405808 HOGENOM:HOG000074123 ArrayExpress:B5MCV6
Bgee:B5MCV6 Uniprot:B5MCV6
Length = 57
Score = 133 (51.9 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 78 WYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFGNFFCDCGA 120
+Y CHTC D +C C + CH+ HD+ + + FFCDCGA
Sbjct: 4 FYRCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRFFCDCGA 46
>UNIPROTKB|E7EP88 [details] [associations]
symbol:FBXO11 "F-box only protein 11" species:9606 "Homo
sapiens" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA]
InterPro:IPR003126 Pfam:PF02207 PROSITE:PS51157 GO:GO:0008270
GO:GO:0016567 GO:GO:0007605 GO:GO:0004842 EMBL:AC006509
EMBL:AC079807 HGNC:HGNC:13590 ChiTaRS:FBXO11 IPI:IPI00894244
ProteinModelPortal:E7EP88 SMR:E7EP88 Ensembl:ENST00000434234
ArrayExpress:E7EP88 Bgee:E7EP88 Uniprot:E7EP88
Length = 81
Score = 133 (51.9 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 78 WYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFGNFFCDCGA 120
+Y CHTC D +C C + CH+ HD+ + + FFCDCGA
Sbjct: 4 FYRCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRFFCDCGA 46
>UNIPROTKB|I3LSH3 [details] [associations]
symbol:I3LSH3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR003126 Pfam:PF02207 GO:GO:0008270 GO:GO:0016567
GO:GO:0004842 GeneTree:ENSGT00640000091448 EMBL:CU633679
Ensembl:ENSSSCT00000029978 Uniprot:I3LSH3
Length = 109
Score = 131 (51.2 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 60 CNKLCTYTITQKEFMNQHWYHCHTCKMIDGVGVCSVCAQVCHKNHD 105
CN C++T T E +NQ + C TC +++ + C+ CA+VCHK HD
Sbjct: 62 CNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARVCHKGHD 107
>UNIPROTKB|B3KUR1 [details] [associations]
symbol:FBXO11 "cDNA FLJ40415 fis, clone TESTI2038104,
highly similar to F-box only protein 11" species:9606 "Homo
sapiens" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR003126 Pfam:PF02207 PROSITE:PS51157 EMBL:CH471053
GO:GO:0008270 GO:GO:0016567 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0004842 InterPro:IPR006633 InterPro:IPR022441 SMART:SM00722
TIGRFAMs:TIGR03804 EMBL:AC006509 EMBL:AC079807 UniGene:Hs.352677
HGNC:HGNC:13590 ChiTaRS:FBXO11 EMBL:AK097734 IPI:IPI00894244
SMR:B3KUR1 STRING:B3KUR1 Ensembl:ENST00000434523 UCSC:uc010fbk.3
HOGENOM:HOG000065743 HOVERGEN:HBG101883 Uniprot:B3KUR1
Length = 351
Score = 143 (55.4 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 64 CTYTITQKEFMNQH-WYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFGNFFCDCGA 120
C Y I+ H +Y CHTC D +C C + CH+ HD+ + + FFCDCGA
Sbjct: 259 CLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRFFCDCGA 316
>WB|WBGene00009460 [details] [associations]
symbol:F36A2.13 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 InterPro:IPR003126
InterPro:IPR024725 Pfam:PF02207 Pfam:PF11547 PROSITE:PS50237
PROSITE:PS51157 SMART:SM00119 GO:GO:0005634 GO:GO:0005737
GO:GO:0008270 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 GO:GO:0042787 SUPFAM:SSF56204
GeneTree:ENSGT00640000091448 KO:K10593 InterPro:IPR013993
SMART:SM00396 EMBL:Z81077 EMBL:Z75952 RefSeq:NP_492389.1
ProteinModelPortal:G5EDT9 SMR:G5EDT9 EnsemblMetazoa:F36A2.13.1
EnsemblMetazoa:F36A2.13.2 GeneID:172697 KEGG:cel:CELE_F36A2.13
CTD:172697 WormBase:F36A2.13 OMA:GRIMGIC NextBio:876631
Uniprot:G5EDT9
Length = 2944
Score = 153 (58.9 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 29/77 (37%), Positives = 41/77 (53%)
Query: 59 LC-NKLCTYTITQKEFMNQHWYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFG-NFFC 116
LC N +C++T T ++ +NQ Y C TC + + CS CA CH+NHD + +C
Sbjct: 1198 LCYNDVCSFTWTGEDHINQDIYECKTCGLTGSLCCCSECALTCHRNHDCRLKRTSPTAYC 1257
Query: 117 DCGAKENGQCLALTKRN 133
DC K + C AL N
Sbjct: 1258 DCWEKSSCNCKALIAGN 1274
>UNIPROTKB|G5EDT9 [details] [associations]
symbol:F36A2.13 "Protein F36A2.13" species:6239
"Caenorhabditis elegans" [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR003126 InterPro:IPR024725 Pfam:PF02207 Pfam:PF11547
PROSITE:PS50237 PROSITE:PS51157 SMART:SM00119 GO:GO:0005634
GO:GO:0005737 GO:GO:0008270 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 GO:GO:0042787 SUPFAM:SSF56204
GeneTree:ENSGT00640000091448 KO:K10593 InterPro:IPR013993
SMART:SM00396 EMBL:Z81077 EMBL:Z75952 RefSeq:NP_492389.1
ProteinModelPortal:G5EDT9 SMR:G5EDT9 EnsemblMetazoa:F36A2.13.1
EnsemblMetazoa:F36A2.13.2 GeneID:172697 KEGG:cel:CELE_F36A2.13
CTD:172697 WormBase:F36A2.13 OMA:GRIMGIC NextBio:876631
Uniprot:G5EDT9
Length = 2944
Score = 153 (58.9 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 29/77 (37%), Positives = 41/77 (53%)
Query: 59 LC-NKLCTYTITQKEFMNQHWYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFG-NFFC 116
LC N +C++T T ++ +NQ Y C TC + + CS CA CH+NHD + +C
Sbjct: 1198 LCYNDVCSFTWTGEDHINQDIYECKTCGLTGSLCCCSECALTCHRNHDCRLKRTSPTAYC 1257
Query: 117 DCGAKENGQCLALTKRN 133
DC K + C AL N
Sbjct: 1258 DCWEKSSCNCKALIAGN 1274
>MGI|MGI:2147134 [details] [associations]
symbol:Fbxo11 "F-box protein 11" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006464 "cellular protein
modification process" evidence=ISO] [GO:0007605 "sensory perception
of sound" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016274 "protein-arginine N-methyltransferase
activity" evidence=ISO] [GO:0035246 "peptidyl-arginine
N-methylation" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001810 InterPro:IPR003126 Pfam:PF02207
PROSITE:PS50181 PROSITE:PS51157 SMART:SM00256 UniPathway:UPA00143
MGI:MGI:2147134 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
SUPFAM:SSF81383 GO:GO:0007605 eggNOG:NOG12793 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 GO:GO:0004842 InterPro:IPR006633
InterPro:IPR007742 InterPro:IPR022441 Pfam:PF05048 SMART:SM00722
TIGRFAMs:TIGR03804 HOVERGEN:HBG051565 OrthoDB:EOG4X0MRK
ChiTaRS:FBXO11 EMBL:BC049946 EMBL:BC055343 EMBL:BC117884
EMBL:BC117885 EMBL:BC128479 IPI:IPI00330330 IPI:IPI00751696
UniGene:Mm.386857 ProteinModelPortal:Q7TPD1 SMR:Q7TPD1
DIP:DIP-59433N STRING:Q7TPD1 PhosphoSite:Q7TPD1 PRIDE:Q7TPD1
UCSC:uc008dvf.1 UCSC:uc008dvg.1 HOGENOM:HOG000020584
InParanoid:Q7TPD1 CleanEx:MM_FBXO11 Genevestigator:Q7TPD1
GermOnline:ENSMUSG00000005371 Uniprot:Q7TPD1
Length = 843
Score = 143 (55.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 64 CTYTITQKEFMNQH-WYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFGNFFCDCGA 120
C Y I+ H +Y CHTC D +C C + CH+ HD+ + + FFCDCGA
Sbjct: 751 CLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRFFCDCGA 808
>RGD|727935 [details] [associations]
symbol:Fbxo11 "F-box protein 11" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006464 "cellular protein modification process" evidence=ISO]
[GO:0007605 "sensory perception of sound" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016274 "protein-arginine
N-methyltransferase activity" evidence=ISO] [GO:0035246
"peptidyl-arginine N-methylation" evidence=ISO] InterPro:IPR001810
InterPro:IPR003126 Pfam:PF02207 PROSITE:PS50181 PROSITE:PS51157
SMART:SM00256 UniPathway:UPA00143 RGD:727935 GO:GO:0005737
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 SUPFAM:SSF81383
GO:GO:0007605 eggNOG:NOG12793 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0004842 GO:GO:0016274 InterPro:IPR006633 InterPro:IPR007742
InterPro:IPR022441 Pfam:PF05048 SMART:SM00722 TIGRFAMs:TIGR03804
CTD:80204 HOVERGEN:HBG051565 KO:K10297 OMA:GLYVTDY
OrthoDB:EOG4X0MRK HOGENOM:HOG000020584 EMBL:AY274810
IPI:IPI00331829 RefSeq:NP_853662.1 UniGene:Rn.36585
ProteinModelPortal:Q7TSL3 STRING:Q7TSL3 PhosphoSite:Q7TSL3
GeneID:301674 KEGG:rno:301674 InParanoid:Q7TSL3 NextBio:649071
Genevestigator:Q7TSL3 GermOnline:ENSRNOG00000016396 Uniprot:Q7TSL3
Length = 843
Score = 143 (55.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 64 CTYTITQKEFMNQH-WYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFGNFFCDCGA 120
C Y I+ H +Y CHTC D +C C + CH+ HD+ + + FFCDCGA
Sbjct: 751 CLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRFFCDCGA 808
>UNIPROTKB|Q7TSL3 [details] [associations]
symbol:Fbxo11 "F-box only protein 11" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001810 InterPro:IPR003126 Pfam:PF02207 PROSITE:PS50181
PROSITE:PS51157 SMART:SM00256 UniPathway:UPA00143 RGD:727935
GO:GO:0005737 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
SUPFAM:SSF81383 GO:GO:0007605 eggNOG:NOG12793 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 GO:GO:0004842 GO:GO:0016274
InterPro:IPR006633 InterPro:IPR007742 InterPro:IPR022441
Pfam:PF05048 SMART:SM00722 TIGRFAMs:TIGR03804 CTD:80204
HOVERGEN:HBG051565 KO:K10297 OMA:GLYVTDY OrthoDB:EOG4X0MRK
HOGENOM:HOG000020584 EMBL:AY274810 IPI:IPI00331829
RefSeq:NP_853662.1 UniGene:Rn.36585 ProteinModelPortal:Q7TSL3
STRING:Q7TSL3 PhosphoSite:Q7TSL3 GeneID:301674 KEGG:rno:301674
InParanoid:Q7TSL3 NextBio:649071 Genevestigator:Q7TSL3
GermOnline:ENSRNOG00000016396 Uniprot:Q7TSL3
Length = 843
Score = 143 (55.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 64 CTYTITQKEFMNQH-WYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFGNFFCDCGA 120
C Y I+ H +Y CHTC D +C C + CH+ HD+ + + FFCDCGA
Sbjct: 751 CLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRFFCDCGA 808
>UNIPROTKB|F1PLE4 [details] [associations]
symbol:FBXO11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001810 InterPro:IPR003126 Pfam:PF02207 PROSITE:PS50181
PROSITE:PS51157 SMART:SM00256 GO:GO:0008270 SUPFAM:SSF81383
GO:GO:0016567 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0004842 InterPro:IPR006633 InterPro:IPR007742
InterPro:IPR022441 Pfam:PF05048 SMART:SM00722 TIGRFAMs:TIGR03804
GeneTree:ENSGT00530000063425 OMA:GLYVTDY EMBL:AAEX03007503
EMBL:AAEX03007504 EMBL:AAEX03007505 EMBL:AAEX03007506
Ensembl:ENSCAFT00000004211 Uniprot:F1PLE4
Length = 872
Score = 143 (55.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 64 CTYTITQKEFMNQH-WYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFGNFFCDCGA 120
C Y I+ H +Y CHTC D +C C + CH+ HD+ + + FFCDCGA
Sbjct: 780 CLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRFFCDCGA 837
>UNIPROTKB|F1NV53 [details] [associations]
symbol:FBXO11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0016274 "protein-arginine N-methyltransferase
activity" evidence=IEA] InterPro:IPR001810 InterPro:IPR003126
Pfam:PF02207 PROSITE:PS50181 PROSITE:PS51157 SMART:SM00256
GO:GO:0005737 GO:GO:0005730 GO:GO:0008270 SUPFAM:SSF81383
GO:GO:0016567 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0004842 GO:GO:0016274 InterPro:IPR006633 InterPro:IPR022441
SMART:SM00722 TIGRFAMs:TIGR03804 GeneTree:ENSGT00530000063425
OMA:GLYVTDY EMBL:AADN02036252 IPI:IPI00579871
Ensembl:ENSGALT00000014542 Uniprot:F1NV53
Length = 879
Score = 143 (55.4 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 64 CTYTITQKEFMNQH-WYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFGNFFCDCGA 120
C Y I+ H +Y CHTC D +C C + CH+ HD+ + + FFCDCGA
Sbjct: 787 CLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRFFCDCGA 844
>ZFIN|ZDB-GENE-061103-70 [details] [associations]
symbol:fbxo11a "F-box protein 11a" species:7955
"Danio rerio" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001810
InterPro:IPR003126 Pfam:PF02207 PROSITE:PS50181 PROSITE:PS51157
SMART:SM00256 ZFIN:ZDB-GENE-061103-70 GO:GO:0008270 SUPFAM:SSF81383
GO:GO:0016567 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0004842 InterPro:IPR006633 InterPro:IPR022441 SMART:SM00722
TIGRFAMs:TIGR03804 GeneTree:ENSGT00530000063425 EMBL:CU463106
EMBL:CU468002 IPI:IPI00503211 Ensembl:ENSDART00000088099
ArrayExpress:F1QNB4 Bgee:F1QNB4 Uniprot:F1QNB4
Length = 879
Score = 143 (55.4 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 64 CTYTITQKEFMNQH-WYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFGNFFCDCGA 120
C Y I+ H +Y CHTC D +C C + CH+ HD+ + + FFCDCGA
Sbjct: 787 CLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRFFCDCGA 844
>UNIPROTKB|Q86XK2 [details] [associations]
symbol:FBXO11 "F-box only protein 11" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0016567 "protein
ubiquitination" evidence=NAS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=NAS] [GO:0006464 "cellular protein modification
process" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016274 "protein-arginine N-methyltransferase
activity" evidence=IDA] [GO:0035246 "peptidyl-arginine
N-methylation" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001810 InterPro:IPR003126 Pfam:PF02207 PROSITE:PS50181
PROSITE:PS51157 SMART:SM00256 UniPathway:UPA00143 GO:GO:0005737
EMBL:CH471053 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
SUPFAM:SSF81383 GO:GO:0007605 eggNOG:NOG12793 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 GO:GO:0006511 GO:GO:0004842
GO:GO:0016274 GO:GO:0000151 InterPro:IPR006633 InterPro:IPR022441
SMART:SM00722 TIGRFAMs:TIGR03804 EMBL:AY827075 EMBL:AF351618
EMBL:AK223592 EMBL:AK022735 EMBL:AK025477 EMBL:AK292877
EMBL:AC006509 EMBL:AC079807 EMBL:BC012728 EMBL:BC043258
EMBL:BC130445 EMBL:BC136480 EMBL:AF174599 EMBL:AF176706
EMBL:AL117620 EMBL:AF264714 IPI:IPI00005896 IPI:IPI00328209
IPI:IPI00386876 IPI:IPI00827549 IPI:IPI00980427 PIR:T17329
RefSeq:NP_001177203.1 RefSeq:NP_079409.3 UniGene:Hs.352677
ProteinModelPortal:Q86XK2 SMR:Q86XK2 DIP:DIP-35680N IntAct:Q86XK2
STRING:Q86XK2 PhosphoSite:Q86XK2 DMDM:124012093 PaxDb:Q86XK2
PRIDE:Q86XK2 DNASU:80204 Ensembl:ENST00000316377
Ensembl:ENST00000402508 Ensembl:ENST00000403359 GeneID:80204
KEGG:hsa:80204 UCSC:uc002rwe.3 UCSC:uc021vhe.1 CTD:80204
GeneCards:GC02M048016 H-InvDB:HIX0002044 HGNC:HGNC:13590
HPA:HPA002690 MIM:607871 neXtProt:NX_Q86XK2 Orphanet:3435
PharmGKB:PA28031 HOVERGEN:HBG051565 InParanoid:Q86XK2 KO:K10297
OMA:GLYVTDY OrthoDB:EOG4X0MRK ChiTaRS:FBXO11 GenomeRNAi:80204
NextBio:70568 ArrayExpress:Q86XK2 Bgee:Q86XK2 Genevestigator:Q86XK2
GermOnline:ENSG00000138081 Uniprot:Q86XK2
Length = 927
Score = 143 (55.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 64 CTYTITQKEFMNQH-WYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFGNFFCDCGA 120
C Y I+ H +Y CHTC D +C C + CH+ HD+ + + FFCDCGA
Sbjct: 835 CLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRFFCDCGA 892
>WB|WBGene00015268 [details] [associations]
symbol:BE0003N10.3 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR003126 Pfam:PF02207
PROSITE:PS51157 GO:GO:0008270 GO:GO:0016567 eggNOG:NOG12793
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 GO:GO:0004842
InterPro:IPR006633 InterPro:IPR022441 SMART:SM00722
TIGRFAMs:TIGR03804 GeneTree:ENSGT00530000063425 InterPro:IPR006342
Pfam:PF05050 EMBL:FO080241 RefSeq:NP_497325.2 UniGene:Cel.23576
ProteinModelPortal:Q965N2 SMR:Q965N2 DIP:DIP-24565N IntAct:Q965N2
MINT:MINT-1126224 PaxDb:Q965N2 EnsemblMetazoa:BE0003N10.3
GeneID:182047 KEGG:cel:CELE_BE0003N10.3 UCSC:BE0003N10.3 CTD:182047
WormBase:BE0003N10.3 InParanoid:Q965N2 NextBio:916186
Uniprot:Q965N2
Length = 1157
Score = 144 (55.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 25/70 (35%), Positives = 37/70 (52%)
Query: 64 CTYTITQKEFMNQH-WYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFGNFFCDCGAK- 121
C ++++ K+F H +Y C TC D +C C + CH+ H + + K F+CDCGA
Sbjct: 1088 CLFSVSGKDFYPMHNFYRCITCNSSDRNAICQSCIERCHEGHTVMFLKCDRFYCDCGADH 1147
Query: 122 -ENGQCLALT 130
E CL T
Sbjct: 1148 LERSCCLRQT 1157
>UNIPROTKB|J9P5M9 [details] [associations]
symbol:UBR5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR002004 InterPro:IPR003126 Pfam:PF00658 Pfam:PF02207
PROSITE:PS50237 PROSITE:PS51157 PROSITE:PS51309 SMART:SM00119
SMART:SM00517 GO:GO:0008270 GO:GO:0016567 GO:GO:0003723
GO:GO:0005622 GO:GO:0004842 Gene3D:1.10.1900.10 SUPFAM:SSF63570
SUPFAM:SSF56204 GeneTree:ENSGT00640000091448 InterPro:IPR013993
SMART:SM00396 EMBL:AAEX03008693 EMBL:AAEX03008694
Ensembl:ENSCAFT00000047363 Uniprot:J9P5M9
Length = 2307
Score = 146 (56.5 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 60 CNKLCTYTITQKEFMNQHWYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFG-NFFCDC 118
CN C++T T E +NQ + C TC +++ + C+ CA+VCHK HD + +CDC
Sbjct: 683 CNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARVCHKGHDCKLKRTSPTAYCDC 742
Query: 119 GAK 121
K
Sbjct: 743 WEK 745
Score = 48 (22.0 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 21/59 (35%), Positives = 26/59 (44%)
Query: 309 LQN-MQHKFVENTDNLMVPVMGSQEGAFE-NVRMNLNGDQGQTIRQL-ISNNSIRRTCM 364
LQN ++ K + T N MV +M S E + GD G L S NS RR M
Sbjct: 1335 LQNYVEEKLIP-TWNWMVSIMDSTEAQLRYGSALASAGDPGHPNHPLHASQNSARRERM 1392
Score = 45 (20.9 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 452 QATDSITINP----HCETSNYIIKALWIP 476
Q SITI P H T+N I L++P
Sbjct: 2255 QPMPSITIRPPDDQHLPTANTCISRLYVP 2283
>RGD|621236 [details] [associations]
symbol:Ubr5 "ubiquitin protein ligase E3 component n-recognin 5"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IBA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=ISO;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=TAS] [GO:0033160 "positive regulation of
protein import into nucleus, translocation" evidence=ISO]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=ISO]
[GO:0035413 "positive regulation of catenin import into nucleus"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0050847
"progesterone receptor signaling pathway" evidence=ISO;IBA]
[GO:0090263 "positive regulation of canonical Wnt receptor
signaling pathway" evidence=ISO] [GO:1901315 "negative regulation
of histone H2A K63-linked ubiquitination" evidence=ISO;ISS]
[GO:2000780 "negative regulation of double-strand break repair"
evidence=ISO;ISS] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR002004 InterPro:IPR003126 InterPro:IPR024725
Pfam:PF00658 Pfam:PF02207 Pfam:PF11547 PROSITE:PS50237
PROSITE:PS51157 PROSITE:PS51309 SMART:SM00119 SMART:SM00517
UniPathway:UPA00143 RGD:621236 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0006974
GO:GO:0003723 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 GO:GO:0090263 GO:GO:0000209 GO:GO:0042787
GO:GO:0035413 GO:GO:0034450 GO:GO:0033160 Gene3D:1.10.1900.10
SUPFAM:SSF63570 SUPFAM:SSF56204 eggNOG:COG5021 InterPro:IPR013993
SMART:SM00396 GO:GO:0050847 GO:GO:2000780 GO:GO:1901315 PDB:3NTW
PDBsum:3NTW HOGENOM:HOG000046848 OrthoDB:EOG4QVCB2 EMBL:X64411
IPI:IPI00768617 PIR:S22659 UniGene:Rn.54812 STRING:Q62671
PhosphoSite:Q62671 PRIDE:Q62671 UCSC:RGD:621236 InParanoid:Q62671
ArrayExpress:Q62671 Genevestigator:Q62671
GermOnline:ENSRNOG00000006816 Uniprot:Q62671
Length = 2788
Score = 146 (56.5 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 60 CNKLCTYTITQKEFMNQHWYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFG-NFFCDC 118
CN C++T T E +NQ + C TC +++ + C+ CA+VCHK HD + +CDC
Sbjct: 1164 CNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARVCHKGHDCKLKRTSPTAYCDC 1223
Query: 119 GAK 121
K
Sbjct: 1224 WEK 1226
Score = 49 (22.3 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 25/88 (28%), Positives = 38/88 (43%)
Query: 309 LQN-MQHKFVENTDNLMVPVMGSQEGAFE-NVRMNLNGDQGQTIRQL-ISNNSIRRTCMC 365
LQN ++ K + T N MV +M S E + GD G L S NS RR M
Sbjct: 1816 LQNYVEEKLIP-TWNWMVSIMDSTEAQLRYGSALASAGDPGHPNHPLHASQNSARRERMT 1874
Query: 366 I-----LSSPQSKRQHLVAVSHEKGKIT 388
L + + +R+ +S +G ++
Sbjct: 1875 AREEASLRTLEGRRRRATLLSARQGMMS 1902
Score = 45 (20.9 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 452 QATDSITINP----HCETSNYIIKALWIP 476
Q SITI P H T+N I L++P
Sbjct: 2736 QPMPSITIRPPDDQHLPTANTCISRLYVP 2764
>UNIPROTKB|Q62671 [details] [associations]
symbol:Ubr5 "E3 ubiquitin-protein ligase UBR5"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR002004 InterPro:IPR003126
InterPro:IPR024725 Pfam:PF00658 Pfam:PF02207 Pfam:PF11547
PROSITE:PS50237 PROSITE:PS51157 PROSITE:PS51309 SMART:SM00119
SMART:SM00517 UniPathway:UPA00143 RGD:621236 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0006974 GO:GO:0003723 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 GO:GO:0090263 GO:GO:0000209
GO:GO:0042787 GO:GO:0035413 GO:GO:0034450 GO:GO:0033160
Gene3D:1.10.1900.10 SUPFAM:SSF63570 SUPFAM:SSF56204 eggNOG:COG5021
InterPro:IPR013993 SMART:SM00396 GO:GO:0050847 GO:GO:2000780
GO:GO:1901315 PDB:3NTW PDBsum:3NTW HOGENOM:HOG000046848
OrthoDB:EOG4QVCB2 EMBL:X64411 IPI:IPI00768617 PIR:S22659
UniGene:Rn.54812 STRING:Q62671 PhosphoSite:Q62671 PRIDE:Q62671
UCSC:RGD:621236 InParanoid:Q62671 ArrayExpress:Q62671
Genevestigator:Q62671 GermOnline:ENSRNOG00000006816 Uniprot:Q62671
Length = 2788
Score = 146 (56.5 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 60 CNKLCTYTITQKEFMNQHWYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFG-NFFCDC 118
CN C++T T E +NQ + C TC +++ + C+ CA+VCHK HD + +CDC
Sbjct: 1164 CNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARVCHKGHDCKLKRTSPTAYCDC 1223
Query: 119 GAK 121
K
Sbjct: 1224 WEK 1226
Score = 49 (22.3 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 25/88 (28%), Positives = 38/88 (43%)
Query: 309 LQN-MQHKFVENTDNLMVPVMGSQEGAFE-NVRMNLNGDQGQTIRQL-ISNNSIRRTCMC 365
LQN ++ K + T N MV +M S E + GD G L S NS RR M
Sbjct: 1816 LQNYVEEKLIP-TWNWMVSIMDSTEAQLRYGSALASAGDPGHPNHPLHASQNSARRERMT 1874
Query: 366 I-----LSSPQSKRQHLVAVSHEKGKIT 388
L + + +R+ +S +G ++
Sbjct: 1875 AREEASLRTLEGRRRRATLLSARQGMMS 1902
Score = 45 (20.9 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 452 QATDSITINP----HCETSNYIIKALWIP 476
Q SITI P H T+N I L++P
Sbjct: 2736 QPMPSITIRPPDDQHLPTANTCISRLYVP 2764
>MGI|MGI:1918040 [details] [associations]
symbol:Ubr5 "ubiquitin protein ligase E3 component
n-recognin 5" species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0033160 "positive regulation of protein import into nucleus,
translocation" evidence=ISO] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=ISO] [GO:0035413 "positive regulation of
catenin import into nucleus" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050847 "progesterone receptor signaling pathway"
evidence=ISO;IBA] [GO:0090263 "positive regulation of canonical Wnt
receptor signaling pathway" evidence=ISO] [GO:1901315 "negative
regulation of histone H2A K63-linked ubiquitination" evidence=ISO]
[GO:2000780 "negative regulation of double-strand break repair"
evidence=ISO] Pfam:PF00632 InterPro:IPR000569 InterPro:IPR002004
InterPro:IPR003126 InterPro:IPR024725 Pfam:PF00658 Pfam:PF02207
Pfam:PF11547 PROSITE:PS50237 PROSITE:PS51157 PROSITE:PS51309
SMART:SM00119 SMART:SM00517 UniPathway:UPA00143 MGI:MGI:1918040
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0006974 GO:GO:0003723 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 GO:GO:0042787
Gene3D:1.10.1900.10 SUPFAM:SSF63570 SUPFAM:SSF56204 eggNOG:COG5021
KO:K10593 ChiTaRS:UBR5 InterPro:IPR013993 SMART:SM00396
GO:GO:0050847 GO:GO:2000780 GO:GO:1901315 CTD:51366
HOVERGEN:HBG096012 OrthoDB:EOG4QVCB2 EMBL:AY550908 EMBL:AK122398
EMBL:BC049162 EMBL:BC049224 EMBL:BC057458 EMBL:BC057923
EMBL:AK014485 IPI:IPI00831567 RefSeq:NP_001074828.2
RefSeq:NP_001106192.1 UniGene:Mm.476840 ProteinModelPortal:Q80TP3
SMR:Q80TP3 DIP:DIP-56890N IntAct:Q80TP3 STRING:Q80TP3
PhosphoSite:Q80TP3 PaxDb:Q80TP3 PRIDE:Q80TP3 GeneID:70790
KEGG:mmu:70790 UCSC:uc007vno.1 NextBio:332258 Genevestigator:Q80TP3
GermOnline:ENSMUSG00000037487 Uniprot:Q80TP3
Length = 2792
Score = 146 (56.5 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 60 CNKLCTYTITQKEFMNQHWYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFG-NFFCDC 118
CN C++T T E +NQ + C TC +++ + C+ CA+VCHK HD + +CDC
Sbjct: 1169 CNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARVCHKGHDCKLKRTSPTAYCDC 1228
Query: 119 GAK 121
K
Sbjct: 1229 WEK 1231
Score = 49 (22.3 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 22/59 (37%), Positives = 26/59 (44%)
Query: 309 LQN-MQHKFVENTDNLMVPVMGSQEGAFE-NVRMNLNGDQGQTIRQL-ISNNSIRRTCM 364
LQN ++ K + T N MV VM S E + GD G L S NS RR M
Sbjct: 1821 LQNYVEEKLIP-TWNWMVSVMDSTEAQLRYGSALASAGDPGHPNHPLHASQNSARRERM 1878
Score = 45 (20.9 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 452 QATDSITINP----HCETSNYIIKALWIP 476
Q SITI P H T+N I L++P
Sbjct: 2740 QPMPSITIRPPDDQHLPTANTCISRLYVP 2768
>UNIPROTKB|F1P0U1 [details] [associations]
symbol:Gga.55416 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR002004
InterPro:IPR003126 InterPro:IPR024725 Pfam:PF00658 Pfam:PF02207
Pfam:PF11547 PROSITE:PS50237 PROSITE:PS51157 PROSITE:PS51309
SMART:SM00119 SMART:SM00517 GO:GO:0008270 GO:GO:0016567
GO:GO:0003723 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 Gene3D:1.10.1900.10 SUPFAM:SSF63570
SUPFAM:SSF56204 GeneTree:ENSGT00640000091448 OMA:ERCDGNR
InterPro:IPR013993 SMART:SM00396 EMBL:AADN02023127
EMBL:AADN02023128 EMBL:AADN02023129 EMBL:AADN02023130
EMBL:AADN02023131 EMBL:AADN02023132 EMBL:AADN02023133
EMBL:AADN02023134 EMBL:AADN02023135 EMBL:AADN02023136
EMBL:AADN02023137 EMBL:AADN02023138 EMBL:AADN02023139
IPI:IPI00575408 Ensembl:ENSGALT00000025850 Uniprot:F1P0U1
Length = 2775
Score = 146 (56.5 bits), Expect = 6.9e-06, Sum P(3) = 6.9e-06
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 60 CNKLCTYTITQKEFMNQHWYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFG-NFFCDC 118
CN C++T T E +NQ + C TC +++ + C+ CA+VCHK HD + +CDC
Sbjct: 1151 CNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARVCHKGHDCKLKRTSPTAYCDC 1210
Query: 119 GAK 121
K
Sbjct: 1211 WEK 1213
Score = 48 (22.0 bits), Expect = 6.9e-06, Sum P(3) = 6.9e-06
Identities = 21/59 (35%), Positives = 26/59 (44%)
Query: 309 LQN-MQHKFVENTDNLMVPVMGSQEGAFE-NVRMNLNGDQGQTIRQL-ISNNSIRRTCM 364
LQN ++ K + T N MV +M S E + GD G L S NS RR M
Sbjct: 1804 LQNYVEEKLIP-TWNWMVSIMDSTEAQLRYGSALASAGDPGHPNHPLHASQNSARRERM 1861
Score = 45 (20.9 bits), Expect = 6.9e-06, Sum P(3) = 6.9e-06
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 452 QATDSITINP----HCETSNYIIKALWIP 476
Q SITI P H T+N I L++P
Sbjct: 2723 QPMPSITIRPPDDQHLPTANTCISRLYVP 2751
>UNIPROTKB|E7EMW7 [details] [associations]
symbol:UBR5 "E3 ubiquitin-protein ligase UBR5" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR002004
InterPro:IPR003126 InterPro:IPR024725 Pfam:PF00658 Pfam:PF02207
Pfam:PF11547 PROSITE:PS50237 PROSITE:PS51157 PROSITE:PS51309
SMART:SM00119 SMART:SM00517 GO:GO:0008270 GO:GO:0016567
GO:GO:0003723 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 Gene3D:1.10.1900.10 SUPFAM:SSF63570
SUPFAM:SSF56204 ChiTaRS:UBR5 InterPro:IPR013993 SMART:SM00396
EMBL:AP002907 HGNC:HGNC:16806 EMBL:AP002981 IPI:IPI00983716
ProteinModelPortal:E7EMW7 SMR:E7EMW7 Ensembl:ENST00000521922
ArrayExpress:E7EMW7 Bgee:E7EMW7 Uniprot:E7EMW7
Length = 2792
Score = 146 (56.5 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 60 CNKLCTYTITQKEFMNQHWYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFG-NFFCDC 118
CN C++T T E +NQ + C TC +++ + C+ CA+VCHK HD + +CDC
Sbjct: 1169 CNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARVCHKGHDCKLKRTSPTAYCDC 1228
Query: 119 GAK 121
K
Sbjct: 1229 WEK 1231
Score = 48 (22.0 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 21/59 (35%), Positives = 26/59 (44%)
Query: 309 LQN-MQHKFVENTDNLMVPVMGSQEGAFE-NVRMNLNGDQGQTIRQL-ISNNSIRRTCM 364
LQN ++ K + T N MV +M S E + GD G L S NS RR M
Sbjct: 1821 LQNYVEEKLIP-TWNWMVSIMDSTEAQLRYGSALASAGDPGHPNHPLHASQNSARRERM 1878
Score = 45 (20.9 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 452 QATDSITINP----HCETSNYIIKALWIP 476
Q SITI P H T+N I L++P
Sbjct: 2740 QPMPSITIRPPDDQHLPTANTCISRLYVP 2768
>UNIPROTKB|F1N0L2 [details] [associations]
symbol:UBR5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000780 "negative regulation of double-strand break
repair" evidence=IEA] [GO:1901315 "negative regulation of histone
H2A K63-linked ubiquitination" evidence=IEA] [GO:0090263 "positive
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0050847 "progesterone receptor signaling pathway"
evidence=IEA] [GO:0035413 "positive regulation of catenin import
into nucleus" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IEA] [GO:0033160 "positive regulation of protein
import into nucleus, translocation" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR002004 InterPro:IPR003126 InterPro:IPR024725
Pfam:PF00658 Pfam:PF02207 Pfam:PF11547 PROSITE:PS50237
PROSITE:PS51157 PROSITE:PS51309 SMART:SM00119 SMART:SM00517
GO:GO:0005634 GO:GO:0008270 GO:GO:0006974 GO:GO:0003723
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0090263
GO:GO:0000209 GO:GO:0035413 GO:GO:0034450 GO:GO:0033160
Gene3D:1.10.1900.10 SUPFAM:SSF63570 SUPFAM:SSF56204
GeneTree:ENSGT00640000091448 KO:K10593 OMA:ERCDGNR
InterPro:IPR013993 SMART:SM00396 GO:GO:0050847 CTD:51366
EMBL:DAAA02039335 IPI:IPI00711165 RefSeq:NP_001179346.1
UniGene:Bt.30209 PRIDE:F1N0L2 Ensembl:ENSBTAT00000028262
GeneID:515582 KEGG:bta:515582 NextBio:20871904 Uniprot:F1N0L2
Length = 2798
Score = 146 (56.5 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 60 CNKLCTYTITQKEFMNQHWYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFG-NFFCDC 118
CN C++T T E +NQ + C TC +++ + C+ CA+VCHK HD + +CDC
Sbjct: 1175 CNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARVCHKGHDCKLKRTSPTAYCDC 1234
Query: 119 GAK 121
K
Sbjct: 1235 WEK 1237
Score = 48 (22.0 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 21/59 (35%), Positives = 26/59 (44%)
Query: 309 LQN-MQHKFVENTDNLMVPVMGSQEGAFE-NVRMNLNGDQGQTIRQL-ISNNSIRRTCM 364
LQN ++ K + T N MV +M S E + GD G L S NS RR M
Sbjct: 1827 LQNYVEEKLIP-TWNWMVSIMDSTEAQLRYGSALASAGDPGHPNHPLHASQNSARRERM 1884
Score = 45 (20.9 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 452 QATDSITINP----HCETSNYIIKALWIP 476
Q SITI P H T+N I L++P
Sbjct: 2746 QPMPSITIRPPDDQHLPTANTCISRLYVP 2774
>UNIPROTKB|F1PBF9 [details] [associations]
symbol:UBR5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR002004
InterPro:IPR003126 InterPro:IPR024725 Pfam:PF00658 Pfam:PF02207
Pfam:PF11547 PROSITE:PS50237 PROSITE:PS51157 PROSITE:PS51309
SMART:SM00119 SMART:SM00517 GO:GO:0008270 GO:GO:0016567
GO:GO:0003723 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 Gene3D:1.10.1900.10 SUPFAM:SSF63570
SUPFAM:SSF56204 GeneTree:ENSGT00640000091448 KO:K10593 OMA:ERCDGNR
InterPro:IPR013993 SMART:SM00396 CTD:51366 EMBL:AAEX03008693
EMBL:AAEX03008694 RefSeq:XP_532290.2 Ensembl:ENSCAFT00000000972
GeneID:475055 KEGG:cfa:475055 Uniprot:F1PBF9
Length = 2798
Score = 146 (56.5 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 60 CNKLCTYTITQKEFMNQHWYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFG-NFFCDC 118
CN C++T T E +NQ + C TC +++ + C+ CA+VCHK HD + +CDC
Sbjct: 1175 CNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARVCHKGHDCKLKRTSPTAYCDC 1234
Query: 119 GAK 121
K
Sbjct: 1235 WEK 1237
Score = 48 (22.0 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 21/59 (35%), Positives = 26/59 (44%)
Query: 309 LQN-MQHKFVENTDNLMVPVMGSQEGAFE-NVRMNLNGDQGQTIRQL-ISNNSIRRTCM 364
LQN ++ K + T N MV +M S E + GD G L S NS RR M
Sbjct: 1827 LQNYVEEKLIP-TWNWMVSIMDSTEAQLRYGSALASAGDPGHPNHPLHASQNSARRERM 1884
Score = 45 (20.9 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 452 QATDSITINP----HCETSNYIIKALWIP 476
Q SITI P H T+N I L++P
Sbjct: 2746 QPMPSITIRPPDDQHLPTANTCISRLYVP 2774
>UNIPROTKB|J3KMW7 [details] [associations]
symbol:UBR5 "E3 ubiquitin-protein ligase UBR5" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR002004
InterPro:IPR003126 InterPro:IPR024725 Pfam:PF00658 Pfam:PF02207
Pfam:PF11547 PROSITE:PS50237 PROSITE:PS51157 PROSITE:PS51309
SMART:SM00119 SMART:SM00517 GO:GO:0008270 GO:GO:0016567
GO:GO:0003723 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 Gene3D:1.10.1900.10 SUPFAM:SSF63570
SUPFAM:SSF56204 ChiTaRS:UBR5 InterPro:IPR013993 SMART:SM00396
EMBL:AP002907 HGNC:HGNC:16806 EMBL:AP002981
ProteinModelPortal:J3KMW7 Ensembl:ENST00000220959 Uniprot:J3KMW7
Length = 2798
Score = 146 (56.5 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 60 CNKLCTYTITQKEFMNQHWYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFG-NFFCDC 118
CN C++T T E +NQ + C TC +++ + C+ CA+VCHK HD + +CDC
Sbjct: 1175 CNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARVCHKGHDCKLKRTSPTAYCDC 1234
Query: 119 GAK 121
K
Sbjct: 1235 WEK 1237
Score = 48 (22.0 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 21/59 (35%), Positives = 26/59 (44%)
Query: 309 LQN-MQHKFVENTDNLMVPVMGSQEGAFE-NVRMNLNGDQGQTIRQL-ISNNSIRRTCM 364
LQN ++ K + T N MV +M S E + GD G L S NS RR M
Sbjct: 1827 LQNYVEEKLIP-TWNWMVSIMDSTEAQLRYGSALASAGDPGHPNHPLHASQNSARRERM 1884
Score = 45 (20.9 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 452 QATDSITINP----HCETSNYIIKALWIP 476
Q SITI P H T+N I L++P
Sbjct: 2746 QPMPSITIRPPDDQHLPTANTCISRLYVP 2774
>UNIPROTKB|O95071 [details] [associations]
symbol:UBR5 "E3 ubiquitin-protein ligase UBR5" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:1901315 "negative regulation of histone H2A
K63-linked ubiquitination" evidence=IMP] [GO:0006974 "response to
DNA damage stimulus" evidence=IDA;IMP] [GO:2000780 "negative
regulation of double-strand break repair" evidence=IMP] [GO:0004842
"ubiquitin-protein ligase activity" evidence=TAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0008283 "cell proliferation" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0050847 "progesterone receptor
signaling pathway" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0035413 "positive regulation of catenin import
into nucleus" evidence=IMP] [GO:0033160 "positive regulation of
protein import into nucleus, translocation" evidence=IMP]
[GO:0090263 "positive regulation of canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IDA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR002004 InterPro:IPR003126 InterPro:IPR024725
Pfam:PF00658 Pfam:PF02207 Pfam:PF11547 PROSITE:PS50237
PROSITE:PS51157 PROSITE:PS51309 SMART:SM00119 SMART:SM00517
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008283 GO:GO:0008270 GO:GO:0006281 GO:GO:0006974
GO:GO:0003723 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0090263 GO:GO:0000209 GO:GO:0042787 GO:GO:0035413
GO:GO:0034450 GO:GO:0033160 Gene3D:1.10.1900.10 SUPFAM:SSF63570
SUPFAM:SSF56204 eggNOG:COG5021 KO:K10593 OMA:ERCDGNR ChiTaRS:UBR5
InterPro:IPR013993 SMART:SM00396 GO:GO:0050847 GO:GO:2000780
GO:GO:1901315 PDB:2QHO PDBsum:2QHO EMBL:AF006010 EMBL:U95000
EMBL:AB020703 EMBL:BC137234 IPI:IPI00026320 RefSeq:NP_056986.2
UniGene:Hs.492445 PDB:1I2T PDB:3PT3 PDBsum:1I2T PDBsum:3PT3
ProteinModelPortal:O95071 SMR:O95071 DIP:DIP-32930N IntAct:O95071
MINT:MINT-196086 STRING:O95071 PhosphoSite:O95071 PaxDb:O95071
PRIDE:O95071 Ensembl:ENST00000520539 GeneID:51366 KEGG:hsa:51366
UCSC:uc003ykr.2 CTD:51366 GeneCards:GC08M103265 H-InvDB:HIX0025542
HGNC:HGNC:16806 HPA:HPA024728 MIM:608413 neXtProt:NX_O95071
PharmGKB:PA162408175 HOGENOM:HOG000046848 HOVERGEN:HBG096012
InParanoid:O95071 OrthoDB:EOG4QVCB2 EvolutionaryTrace:O95071
GenomeRNAi:51366 NextBio:54837 ArrayExpress:O95071 Bgee:O95071
CleanEx:HS_UBR5 Genevestigator:O95071 GermOnline:ENSG00000104517
Uniprot:O95071
Length = 2799
Score = 146 (56.5 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 60 CNKLCTYTITQKEFMNQHWYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFG-NFFCDC 118
CN C++T T E +NQ + C TC +++ + C+ CA+VCHK HD + +CDC
Sbjct: 1175 CNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARVCHKGHDCKLKRTSPTAYCDC 1234
Query: 119 GAK 121
K
Sbjct: 1235 WEK 1237
Score = 48 (22.0 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 21/59 (35%), Positives = 26/59 (44%)
Query: 309 LQN-MQHKFVENTDNLMVPVMGSQEGAFE-NVRMNLNGDQGQTIRQL-ISNNSIRRTCM 364
LQN ++ K + T N MV +M S E + GD G L S NS RR M
Sbjct: 1827 LQNYVEEKLIP-TWNWMVSIMDSTEAQLRYGSALASAGDPGHPNHPLHASQNSARRERM 1884
Score = 45 (20.9 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 452 QATDSITINP----HCETSNYIIKALWIP 476
Q SITI P H T+N I L++P
Sbjct: 2747 QPMPSITIRPPDDQHLPTANTCISRLYVP 2775
>ZFIN|ZDB-GENE-030131-6559 [details] [associations]
symbol:ubr5 "ubiquitin protein ligase E3 component
n-recognin 5" species:7955 "Danio rerio" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA] [GO:0006464
"cellular protein modification process" evidence=IEA] [GO:0043130
"ubiquitin binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0050847 "progesterone receptor
signaling pathway" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR002004 InterPro:IPR003126 InterPro:IPR024725
Pfam:PF00658 Pfam:PF02207 Pfam:PF11547 PROSITE:PS50237
PROSITE:PS51157 PROSITE:PS51309 SMART:SM00119 SMART:SM00517
ZFIN:ZDB-GENE-030131-6559 GO:GO:0005634 GO:GO:0005737 GO:GO:0008270
GO:GO:0003723 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 GO:GO:0042787 Gene3D:1.10.1900.10 SUPFAM:SSF63570
SUPFAM:SSF56204 GeneTree:ENSGT00640000091448 InterPro:IPR013993
SMART:SM00396 GO:GO:0050847 EMBL:CR293507 IPI:IPI00618527
Ensembl:ENSDART00000134444 ArrayExpress:F1QT71 Bgee:F1QT71
Uniprot:F1QT71
Length = 2822
Score = 146 (56.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 60 CNKLCTYTITQKEFMNQHWYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFG-NFFCDC 118
CN C++T T E +NQ + C TC +++ + C+ CA+VCHK HD + +CDC
Sbjct: 1205 CNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARVCHKGHDCKLKRTSPTAYCDC 1264
Query: 119 GAK 121
K
Sbjct: 1265 WEK 1267
Score = 45 (20.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 452 QATDSITINP----HCETSNYIIKALWIP 476
Q SITI P H T+N I L++P
Sbjct: 2770 QPMPSITIRPPDDQHLPTANTCISRLYVP 2798
>WB|WBGene00001089 [details] [associations]
symbol:dre-1 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018991
"oviposition" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008406 "gonad development"
evidence=IGI;IMP] [GO:0016477 "cell migration" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0008078
"mesodermal cell migration" evidence=IGI] [GO:0040034 "regulation
of development, heterochronic" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001810 InterPro:IPR003126 Pfam:PF00646 Pfam:PF02207
PROSITE:PS50181 PROSITE:PS51157 SMART:SM00256 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0005737 GO:GO:0040007
GO:GO:0018991 GO:GO:0008406 GO:GO:0002119 GO:GO:0018996
GO:GO:0008270 GO:GO:0010171 SUPFAM:SSF81383 GO:GO:0016567
eggNOG:NOG12793 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0040034 GO:GO:0004842 GO:GO:0008078 InterPro:IPR006633
InterPro:IPR022441 SMART:SM00722 TIGRFAMs:TIGR03804
GeneTree:ENSGT00530000063425 KO:K10297 OMA:GLYVTDY
HOGENOM:HOG000020584 EMBL:FO081056 RefSeq:NP_504661.1
ProteinModelPortal:Q94251 SMR:Q94251 DIP:DIP-27041N IntAct:Q94251
MINT:MINT-1063178 STRING:Q94251 EnsemblMetazoa:K04A8.6
GeneID:179045 KEGG:cel:CELE_K04A8.6 UCSC:K04A8.6 CTD:179045
WormBase:K04A8.6 InParanoid:Q94251 NextBio:903666 Uniprot:Q94251
Length = 936
Score = 135 (52.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 63 LCTYTITQKEFMNQH-WYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFGNFFCDCGA 120
LC + ++ H +Y C TC + +C+ C + CH+ H + +F FFCDCGA
Sbjct: 844 LCLFKVSSNNSFPMHNFYRCTTCNTTERNAICTNCIRTCHRGHSVELVRFDRFFCDCGA 902
>UNIPROTKB|Q94251 [details] [associations]
symbol:dre-1 "Protein DRE-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001810 InterPro:IPR003126 Pfam:PF00646 Pfam:PF02207
PROSITE:PS50181 PROSITE:PS51157 SMART:SM00256 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0005737 GO:GO:0040007
GO:GO:0018991 GO:GO:0008406 GO:GO:0002119 GO:GO:0018996
GO:GO:0008270 GO:GO:0010171 SUPFAM:SSF81383 GO:GO:0016567
eggNOG:NOG12793 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0040034 GO:GO:0004842 GO:GO:0008078 InterPro:IPR006633
InterPro:IPR022441 SMART:SM00722 TIGRFAMs:TIGR03804
GeneTree:ENSGT00530000063425 KO:K10297 OMA:GLYVTDY
HOGENOM:HOG000020584 EMBL:FO081056 RefSeq:NP_504661.1
ProteinModelPortal:Q94251 SMR:Q94251 DIP:DIP-27041N IntAct:Q94251
MINT:MINT-1063178 STRING:Q94251 EnsemblMetazoa:K04A8.6
GeneID:179045 KEGG:cel:CELE_K04A8.6 UCSC:K04A8.6 CTD:179045
WormBase:K04A8.6 InParanoid:Q94251 NextBio:903666 Uniprot:Q94251
Length = 936
Score = 135 (52.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 63 LCTYTITQKEFMNQH-WYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFGNFFCDCGA 120
LC + ++ H +Y C TC + +C+ C + CH+ H + +F FFCDCGA
Sbjct: 844 LCLFKVSSNNSFPMHNFYRCTTCNTTERNAICTNCIRTCHRGHSVELVRFDRFFCDCGA 902
>FB|FBgn0037760 [details] [associations]
symbol:FBX011 "FBX011 ortholog" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0070923 "siRNA loading onto RISC involved in chromatin
silencing by small RNA" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060966 "regulation of gene silencing by RNA"
evidence=IMP] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] InterPro:IPR001810 InterPro:IPR003126 Pfam:PF00646
Pfam:PF02207 PROSITE:PS50181 PROSITE:PS51157 SMART:SM00256
EMBL:AE014297 GO:GO:0048471 GO:GO:0008270 SUPFAM:SSF81383
GO:GO:0016567 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0004842 HSSP:Q13309 InterPro:IPR006633 InterPro:IPR007742
InterPro:IPR022441 Pfam:PF05048 SMART:SM00722 TIGRFAMs:TIGR03804
GeneTree:ENSGT00530000063425 KO:K10297 OMA:GLYVTDY GO:GO:0070923
FlyBase:FBgn0037760 ChiTaRS:FBX011 GO:GO:0060966 RefSeq:NP_649954.1
UniGene:Dm.17044 ProteinModelPortal:Q9VH60 SMR:Q9VH60 IntAct:Q9VH60
STRING:Q9VH60 PRIDE:Q9VH60 EnsemblMetazoa:FBtr0082155 GeneID:41209
KEGG:dme:Dmel_CG9461 UCSC:CG9461-RA CTD:41209 InParanoid:Q9VH60
PhylomeDB:Q9VH60 GenomeRNAi:41209 NextBio:822737
ArrayExpress:Q9VH60 Bgee:Q9VH60 Uniprot:Q9VH60
Length = 1182
Score = 136 (52.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 24/65 (36%), Positives = 32/65 (49%)
Query: 64 CTYTITQKEFMNQH-WYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFGNFFCDCGAKE 122
C Y I+ H +Y C TC D +C C + CH HD+ + + FFCDCGA
Sbjct: 1090 CLYKISSYTSFPMHDFYRCQTCNTTDRNAICVNCIKNCHAGHDVEFIRHDRFFCDCGAGT 1149
Query: 123 -NGQC 126
+ QC
Sbjct: 1150 LSNQC 1154
>UNIPROTKB|I3LN00 [details] [associations]
symbol:FBXO11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016274 "protein-arginine N-methyltransferase activity"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001810 InterPro:IPR003126 Pfam:PF02207
PROSITE:PS50181 PROSITE:PS51157 SMART:SM00256 GO:GO:0005737
GO:GO:0005730 GO:GO:0008270 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0007605 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0004842 GO:GO:0016274 InterPro:IPR006633 InterPro:IPR007742
InterPro:IPR022441 Pfam:PF05048 SMART:SM00722 TIGRFAMs:TIGR03804
GeneTree:ENSGT00530000063425 OMA:GLYVTDY EMBL:FP090893
EMBL:FP476043 EMBL:FP700151 Ensembl:ENSSSCT00000028062
Uniprot:I3LN00
Length = 928
Score = 134 (52.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 64 CTYTITQKEFMNQH-WYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFGN-FFCDCGA 120
C Y I+ H +Y CHTC D +C C + CH+ HD+ + + FFCDCGA
Sbjct: 835 CLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRYFFCDCGA 893
>FB|FBgn0002431 [details] [associations]
symbol:hyd "hyperplastic discs" species:7227 "Drosophila
melanogaster" [GO:0008585 "female gonad development" evidence=IMP]
[GO:0007444 "imaginal disc development" evidence=NAS;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=NAS;IDA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0007446 "imaginal disc growth" evidence=IMP] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS;IBA;NAS]
[GO:0007455 "eye-antennal disc morphogenesis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=NAS] [GO:0042127
"regulation of cell proliferation" evidence=NAS] [GO:0045879
"negative regulation of smoothened signaling pathway" evidence=NAS]
[GO:0048749 "compound eye development" evidence=NAS] [GO:0030162
"regulation of proteolysis" evidence=NAS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0007112 "male
meiosis cytokinesis" evidence=IMP] [GO:0007289 "spermatid nucleus
differentiation" evidence=IMP] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] Pfam:PF00632 InterPro:IPR000569 InterPro:IPR002004
InterPro:IPR003126 InterPro:IPR024725 Pfam:PF00658 Pfam:PF02207
Pfam:PF11547 PROSITE:PS50237 PROSITE:PS51157 PROSITE:PS51309
SMART:SM00119 SMART:SM00517 EMBL:AE014297 GO:GO:0005634
GO:GO:0005737 GO:GO:0008585 GO:GO:0046872 GO:GO:0008270
GO:GO:0030162 GO:GO:0003723 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0007289 InterPro:IPR015940 PROSITE:PS50030
GO:GO:0004842 GO:GO:0007112 GO:GO:0048749 GO:GO:0042787
GO:GO:0007455 GO:GO:0045879 GO:GO:0007446 Gene3D:1.10.1900.10
SUPFAM:SSF63570 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00640000091448 EMBL:L14644 PIR:T08437
RefSeq:NP_524296.2 ProteinModelPortal:P51592 SMR:P51592
IntAct:P51592 STRING:P51592 PaxDb:P51592 EnsemblMetazoa:FBtr0082090
GeneID:41181 KEGG:dme:Dmel_CG9484 CTD:41181 FlyBase:FBgn0002431
InParanoid:P51592 KO:K10593 OMA:ERCDGNR OrthoDB:EOG4QBZM4
PhylomeDB:P51592 ChiTaRS:UBR5 GenomeRNAi:41181 NextBio:822597
Bgee:P51592 GermOnline:CG9484 InterPro:IPR013993 SMART:SM00396
Uniprot:P51592
Length = 2885
Score = 136 (52.9 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 59 LC-NKLCTYTITQKEFMNQHWYHCHTCKMIDGVGVCSVCAQVCHKNHDITYSKFG-NFFC 116
+C N C++T T + +NQ+ + C TC + + C+ CA+VCHK HD + +C
Sbjct: 1213 ICYNDTCSFTWTGADHINQNIFECKTCGLTGSLCCCTECARVCHKGHDCKLKRTAPTAYC 1272
Query: 117 DCGAKENGQCLALTKRN 133
DC E +C AL N
Sbjct: 1273 DCW--EKCKCKALIAGN 1287
Score = 51 (23.0 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 21/103 (20%), Positives = 49/103 (47%)
Query: 264 IFDRIWEI-LPPILEVFKEMTPALKAGIAK-TSPVGV----FDRVSHGLFQLQNMQHKFV 317
+F + +I + + EV + + ++ G+ + T+P + D S LF + + V
Sbjct: 1521 VFQTLHKISIEELCEVSEALIAPVRLGVVRPTAPFTMSSSNLDN-SDDLFSVDPLAPSNV 1579
Query: 318 EN-TDNLMVPVMGSQEGAFENVRMNLNGDQGQTIRQLISNNSI 359
E+ ++ ++V G+ + A N++ N + +TIR + +
Sbjct: 1580 ESPSEQILVHDAGNDQSANFNIQQNYDVVAMETIRDASESEEV 1622
Score = 45 (20.9 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 452 QATDSITINP----HCETSNYIIKALWIP 476
Q S+TI P H T+N I L+IP
Sbjct: 2833 QPLPSVTIRPADDSHLPTANTCISRLYIP 2861
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 499 398 0.00097 117 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 46
No. of states in DFA: 618 (66 KB)
Total size of DFA: 271 KB (2143 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 29.63u 0.09s 29.72t Elapsed: 00:01:26
Total cpu time: 29.64u 0.09s 29.73t Elapsed: 00:01:28
Start: Thu Aug 15 10:51:41 2013 End: Thu Aug 15 10:53:09 2013