BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11331
(780 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P05408|7B2_HUMAN Neuroendocrine protein 7B2 OS=Homo sapiens GN=SCG5 PE=1 SV=2
Length = 212
Score = 73.2 bits (178), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 8/98 (8%)
Query: 288 QQSSLWGHQFVQGGAGEGKQLLKPEGSIKNQNQVKTDATLP-------AYCNPPNPCPVG 340
Q +L G Q ++GGA EG Q L P G+I N T +P Y +PPNPCPVG
Sbjct: 64 QAMNLVGPQSIEGGAHEGLQHLGPFGNIPNIVAELTGDNIPKDFSEDQGYPDPPNPCPVG 123
Query: 341 YTAEDGCLEDFENSAEYSRVYQAAQECMCDAEHMFASV 378
TA+DGCLE+ ++AE+SR +Q Q + D EH + +
Sbjct: 124 KTADDGCLENTPDTAEFSREFQLHQH-LFDPEHDYPGL 160
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 8/83 (9%)
Query: 655 GGAGEGKQLLKPEGSIKNQNQVKTDATLP-------AYCNPPNPCPVGYTAEDGCLEDFE 707
GGA EG Q L P G+I N T +P Y +PPNPCPVG TA+DGCLE+
Sbjct: 76 GGAHEGLQHLGPFGNIPNIVAELTGDNIPKDFSEDQGYPDPPNPCPVGKTADDGCLENTP 135
Query: 708 NSAEYSRVYQAAQECMCDAEHMF 730
++AE+SR +Q Q + D EH +
Sbjct: 136 DTAEFSREFQLHQH-LFDPEHDY 157
>sp|P12961|7B2_MOUSE Neuroendocrine protein 7B2 OS=Mus musculus GN=Scg5 PE=1 SV=1
Length = 212
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 67/135 (49%), Gaps = 19/135 (14%)
Query: 251 TDVDKDFDAVNPQTGFDYPESNNSPGHSPSLRDQEYLQQSSLWGHQFVQGGAGEGKQLLK 310
TD+ + V Q G P P H Q +L G Q ++GGA EG Q L
Sbjct: 38 TDIQRLLHGVMEQLGIARPRVE-YPAH----------QAMNLVGPQSIEGGAHEGLQHLG 86
Query: 311 PEGSIKNQNQVKTDATLP-------AYCNPPNPCPVGYTAEDGCLEDFENSAEYSRVYQA 363
P G+I N T +P Y +PPNPCP+G TA+DGCLE+ ++AE+SR +Q
Sbjct: 87 PFGNIPNIVAELTGDNIPKDFSEDQGYPDPPNPCPLGKTADDGCLENAPDTAEFSREFQL 146
Query: 364 AQECMCDAEHMFASV 378
Q + D EH + +
Sbjct: 147 DQH-LFDPEHDYPGL 160
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 8/83 (9%)
Query: 655 GGAGEGKQLLKPEGSIKNQNQVKTDATLP-------AYCNPPNPCPVGYTAEDGCLEDFE 707
GGA EG Q L P G+I N T +P Y +PPNPCP+G TA+DGCLE+
Sbjct: 76 GGAHEGLQHLGPFGNIPNIVAELTGDNIPKDFSEDQGYPDPPNPCPLGKTADDGCLENAP 135
Query: 708 NSAEYSRVYQAAQECMCDAEHMF 730
++AE+SR +Q Q + D EH +
Sbjct: 136 DTAEFSREFQLDQH-LFDPEHDY 157
>sp|P27682|7B2_RAT Neuroendocrine protein 7B2 OS=Rattus norvegicus GN=Scg5 PE=1 SV=1
Length = 210
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 67/135 (49%), Gaps = 19/135 (14%)
Query: 251 TDVDKDFDAVNPQTGFDYPESNNSPGHSPSLRDQEYLQQSSLWGHQFVQGGAGEGKQLLK 310
TD+ + V Q G P P H Q +L G Q ++GGA EG Q L
Sbjct: 36 TDIQRLLHGVMEQLGIARPRVE-YPAH----------QAMNLVGPQSIEGGAHEGLQHLG 84
Query: 311 PEGSIKNQNQVKTDATLP-------AYCNPPNPCPVGYTAEDGCLEDFENSAEYSRVYQA 363
P G+I N T +P Y +PPNPCP+G TA+DGCLE+ ++AE+SR +Q
Sbjct: 85 PFGNIPNIVAELTGDNIPKDFSEDQGYPDPPNPCPLGKTADDGCLENAPDTAEFSREFQL 144
Query: 364 AQECMCDAEHMFASV 378
Q + D EH + +
Sbjct: 145 DQH-LFDPEHDYPGL 158
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 8/83 (9%)
Query: 655 GGAGEGKQLLKPEGSIKNQNQVKTDATLP-------AYCNPPNPCPVGYTAEDGCLEDFE 707
GGA EG Q L P G+I N T +P Y +PPNPCP+G TA+DGCLE+
Sbjct: 74 GGAHEGLQHLGPFGNIPNIVAELTGDNIPKDFSEDQGYPDPPNPCPLGKTADDGCLENAP 133
Query: 708 NSAEYSRVYQAAQECMCDAEHMF 730
++AE+SR +Q Q + D EH +
Sbjct: 134 DTAEFSREFQLDQH-LFDPEHDY 155
>sp|P18844|7B2_XENLA Neuroendocrine protein 7B2 (Fragment) OS=Xenopus laevis GN=sgne1
PE=1 SV=1
Length = 161
Score = 69.7 bits (169), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Query: 288 QQSSLWGHQFVQGGAGEGKQLLKPEGSIKNQNQVKTDATLP-------AYCNPPNPCPVG 340
Q +L G Q ++GGA EG Q L P G+I N T +P Y NPPNPCPVG
Sbjct: 17 QAMNLVGPQSIEGGAHEGLQHLGPYGNIPNIVAELTGDNIPKDFREDQGYPNPPNPCPVG 76
Query: 341 YTAEDGCLEDFENSAEYSRVYQAAQECMCDAEHMFASV 378
T DGCLED ++A++SR YQ Q + D EH +
Sbjct: 77 KTG-DGCLEDTPDTAQFSREYQLHQN-LYDPEHNYPGA 112
Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Query: 655 GGAGEGKQLLKPEGSIKNQNQVKTDATLP-------AYCNPPNPCPVGYTAEDGCLEDFE 707
GGA EG Q L P G+I N T +P Y NPPNPCPVG T DGCLED
Sbjct: 29 GGAHEGLQHLGPYGNIPNIVAELTGDNIPKDFREDQGYPNPPNPCPVGKTG-DGCLEDTP 87
Query: 708 NSAEYSRVYQAAQECMCDAEHMF 730
++A++SR YQ Q + D EH +
Sbjct: 88 DTAQFSREYQLHQN-LYDPEHNY 109
>sp|A5A6J6|7B2_PANTR Neuroendocrine protein 7B2 OS=Pan troglodytes GN=SCG5 PE=2 SV=1
Length = 211
Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 9/98 (9%)
Query: 288 QQSSLWGHQFVQGGAGEGKQLLKPEGSIKNQNQVKTDATLP-------AYCNPPNPCPVG 340
Q +L G Q ++GGA EG Q L P G+I N T +P Y +PPNPCPVG
Sbjct: 64 QAMNLVGPQSIEGGAHEGLQHLGPFGNIPNIVAELTGDNIPKDFSEDQGYPDPPNPCPVG 123
Query: 341 YTAEDGCLEDFENSAEYSRVYQAAQECMCDAEHMFASV 378
T +DGCLE+ ++AE+SR +Q Q + D EH + +
Sbjct: 124 KT-DDGCLENTPDTAEFSREFQLHQH-LFDPEHDYPGL 159
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 655 GGAGEGKQLLKPEGSIKNQNQVKTDATLP-------AYCNPPNPCPVGYTAEDGCLEDFE 707
GGA EG Q L P G+I N T +P Y +PPNPCPVG T +DGCLE+
Sbjct: 76 GGAHEGLQHLGPFGNIPNIVAELTGDNIPKDFSEDQGYPDPPNPCPVGKT-DDGCLENTP 134
Query: 708 NSAEYSRVYQAAQECMCDAEHMF 730
++AE+SR +Q Q + D EH +
Sbjct: 135 DTAEFSREFQLHQH-LFDPEHDY 156
>sp|P01165|7B2_PIG Neuroendocrine protein 7B2 OS=Sus scrofa GN=SCG5 PE=1 SV=2
Length = 207
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 66/135 (48%), Gaps = 20/135 (14%)
Query: 251 TDVDKDFDAVNPQTGFDYPESNNSPGHSPSLRDQEYLQQSSLWGHQFVQGGAGEGKQLLK 310
TD+ + V Q G P P H Q +L G Q ++GGA EG Q L
Sbjct: 34 TDIQRLLHGVMEQLGIARPRVE-YPAH----------QAMNLVGPQSIEGGAHEGLQHLG 82
Query: 311 PEGSIKN-------QNQVKTDATLPAYCNPPNPCPVGYTAEDGCLEDFENSAEYSRVYQA 363
P G+I N N K + Y +PPNPCP+G T +DGCLE+ ++AE+SR +Q
Sbjct: 83 PFGNIPNIVAELTGDNTPKDFSEDQGYPDPPNPCPIGKT-DDGCLENTPDTAEFSREFQL 141
Query: 364 AQECMCDAEHMFASV 378
Q + D EH + +
Sbjct: 142 HQH-LFDPEHDYPGL 155
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 655 GGAGEGKQLLKPEGSIKN-------QNQVKTDATLPAYCNPPNPCPVGYTAEDGCLEDFE 707
GGA EG Q L P G+I N N K + Y +PPNPCP+G T +DGCLE+
Sbjct: 72 GGAHEGLQHLGPFGNIPNIVAELTGDNTPKDFSEDQGYPDPPNPCPIGKT-DDGCLENTP 130
Query: 708 NSAEYSRVYQAAQECMCDAEHMF 730
++AE+SR +Q Q + D EH +
Sbjct: 131 DTAEFSREFQLHQH-LFDPEHDY 152
>sp|Q3SZ16|IAH1_BOVIN Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Bos taurus
GN=IAH1 PE=2 SV=1
Length = 249
Score = 36.6 bits (83), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 687 NPPNPCPVGYTAE---DGCLEDFENS--AEYSR-VYQAAQECMCDAEHMFACPQEPPQHN 740
PP C + E GC + NS EY+R Q AQ+C DA +++ Q+ Q
Sbjct: 132 TPPPLCEAAWAQECLQQGCKLNRLNSVVGEYARACLQVAQDCGADALDLWSLMQKDGQDF 191
Query: 741 PNEIEYSPFLNPDKNPYLQGDMLPIAAKKGNNVPKIM 777
+ + L+P N ++ + P+ KK +++P ++
Sbjct: 192 SSYLSDGLHLSPKGNEFVFSHLWPLIEKKVSSLPFLL 228
>sp|Q47NX7|ARC_THEFY Proteasome-associated ATPase OS=Thermobifida fusca (strain YX)
GN=arc PE=3 SV=1
Length = 584
Score = 33.1 bits (74), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 11/77 (14%)
Query: 17 GFNGHFKVIEVLIVDARTTIHKYNKELYSGPKLRPGQGPSLYNSKN------DRVLTENL 70
G NG ++I DA + +KEL+ KLRP +G LY + + +L
Sbjct: 232 GLNGQIEMIR----DA-VELPYLHKELFREHKLRPPKGVLLYGPPGCGKTLIAKAVANSL 286
Query: 71 LREVVDKMGRDLADAYF 87
++V +K GRD+ ++F
Sbjct: 287 AKQVAEKTGRDVGKSFF 303
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 305,164,058
Number of Sequences: 539616
Number of extensions: 13903630
Number of successful extensions: 33070
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 33034
Number of HSP's gapped (non-prelim): 39
length of query: 780
length of database: 191,569,459
effective HSP length: 125
effective length of query: 655
effective length of database: 124,117,459
effective search space: 81296935645
effective search space used: 81296935645
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)