Query psy11333
Match_columns 482
No_of_seqs 268 out of 2945
Neff 10.5
Searched_HMMs 29240
Date Fri Aug 16 15:42:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11333.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11333hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3n_A Kelch-like protein 11; 100.0 1.7E-41 5.7E-46 312.6 22.2 258 11-268 6-272 (279)
2 3hve_A Gigaxonin; ubiquitin, c 100.0 4.4E-41 1.5E-45 305.9 8.1 245 13-257 7-254 (256)
3 2xn4_A Kelch-like protein 2; s 100.0 8.3E-37 2.8E-41 286.4 24.0 213 261-479 87-302 (302)
4 2xn4_A Kelch-like protein 2; s 100.0 1.7E-36 6E-41 284.2 23.6 213 261-479 40-254 (302)
5 1zgk_A Kelch-like ECH-associat 100.0 1.6E-36 5.6E-41 285.0 22.9 215 260-480 48-266 (308)
6 3ii7_A Kelch-like protein 7; p 100.0 1.9E-36 6.4E-41 284.5 22.9 213 261-480 34-251 (306)
7 1zgk_A Kelch-like ECH-associat 100.0 3.3E-36 1.1E-40 283.0 24.1 209 261-475 100-308 (308)
8 2vpj_A Kelch-like protein 12; 100.0 6.7E-36 2.3E-40 280.1 25.0 213 261-479 41-256 (301)
9 3ii7_A Kelch-like protein 7; p 100.0 4E-36 1.4E-40 282.3 21.6 213 261-479 80-297 (306)
10 2vpj_A Kelch-like protein 12; 100.0 7.1E-36 2.4E-40 279.9 21.9 209 263-477 93-301 (301)
11 4asc_A Kelch repeat and BTB do 100.0 8.4E-36 2.9E-40 281.2 21.7 205 274-480 33-247 (315)
12 4asc_A Kelch repeat and BTB do 100.0 5.2E-36 1.8E-40 282.6 18.7 212 261-480 77-301 (315)
13 2woz_A Kelch repeat and BTB do 100.0 2E-35 6.7E-40 279.0 19.8 212 261-480 88-311 (318)
14 2woz_A Kelch repeat and BTB do 100.0 8.2E-35 2.8E-39 274.8 21.2 203 275-479 45-256 (318)
15 2zwa_A Leucine carboxyl methyl 100.0 2.3E-33 7.8E-38 290.4 12.7 261 208-479 315-610 (695)
16 2uvk_A YJHT; unknown function, 100.0 2.6E-32 9E-37 262.0 18.8 213 261-479 43-319 (357)
17 2uvk_A YJHT; unknown function, 100.0 1.4E-31 4.6E-36 257.1 20.8 203 272-480 5-256 (357)
18 2zwa_A Leucine carboxyl methyl 100.0 7.1E-29 2.4E-33 256.8 19.1 200 273-477 436-665 (695)
19 1k3i_A Galactose oxidase precu 99.9 3.7E-27 1.3E-31 243.9 17.7 202 274-479 238-524 (656)
20 3htm_A Speckle-type POZ protei 99.9 1.6E-27 5.5E-32 203.2 11.8 156 19-174 16-171 (172)
21 1k3i_A Galactose oxidase precu 99.9 1.6E-25 5.6E-30 231.6 16.2 200 275-479 184-469 (656)
22 3hqi_A Speckle-type POZ protei 99.9 1.2E-24 4.2E-29 203.6 12.5 153 22-174 159-311 (312)
23 2z8h_A Transcription regulator 99.9 2.1E-24 7.1E-29 175.8 9.7 130 8-139 7-137 (138)
24 1r29_A B-cell lymphoma 6 prote 99.9 2.6E-24 8.7E-29 172.9 10.0 123 11-134 3-126 (127)
25 4eoz_A Speckle-type POZ protei 99.9 4E-25 1.4E-29 182.6 4.1 136 21-156 9-144 (145)
26 2if5_A Zinc finger and BTB dom 99.9 3.4E-24 1.2E-28 170.4 9.2 117 15-131 3-119 (120)
27 3ohu_A Transcription regulator 99.9 4E-24 1.4E-28 171.2 5.2 123 7-131 2-125 (125)
28 3b84_A Zinc finger and BTB dom 99.9 5.8E-24 2E-28 168.3 6.0 116 15-134 2-117 (119)
29 2ppi_A Gigaxonin; BTB domain, 99.9 6.6E-24 2.3E-28 173.6 6.3 123 10-132 20-144 (144)
30 1buo_A POZ domain, protein (pr 99.9 3.3E-23 1.1E-27 164.6 9.3 117 13-134 4-120 (121)
31 2yy9_A Zinc finger and BTB dom 99.9 1.3E-23 4.5E-28 170.1 6.9 119 16-138 4-122 (135)
32 2vpk_A Myoneurin; transcriptio 99.9 2.6E-23 9E-28 164.1 7.5 111 18-132 3-115 (116)
33 2ihc_A Transcription regulator 99.9 1.7E-23 5.9E-28 166.9 5.3 120 11-132 3-123 (124)
34 3ga1_A Nucleus accumbens-assoc 99.9 3E-23 1E-27 166.9 6.0 123 8-134 4-127 (129)
35 2q81_A MIZ-1 protein; BTB/POZ 99.9 5.6E-23 1.9E-27 162.7 4.2 113 15-132 5-117 (119)
36 2vkp_A BTB/POZ domain-containi 99.9 1.7E-22 5.7E-27 157.7 6.0 104 31-135 2-109 (109)
37 3fkc_A Transcriptional regulat 99.8 3.8E-21 1.3E-25 151.0 7.6 110 11-125 5-115 (116)
38 3m5b_A Zinc finger and BTB dom 99.8 2.1E-20 7E-25 147.1 7.0 105 18-133 13-117 (119)
39 2eqx_A Kelch repeat and BTB do 99.5 1.1E-14 3.8E-19 111.3 7.2 95 132-229 5-99 (105)
40 2ast_A S-phase kinase-associat 99.3 1.9E-12 6.5E-17 106.9 6.7 103 40-143 3-134 (159)
41 4ajy_C Transcription elongatio 99.1 8.1E-11 2.8E-15 88.1 5.6 80 40-120 4-97 (97)
42 1fs1_B SKP1, cyclin A/CDK2-ass 98.9 1.2E-09 4.2E-14 87.7 6.2 97 40-141 4-127 (141)
43 2p1m_A SKP1-like protein 1A; F 98.8 1.5E-09 5.3E-14 89.3 2.0 99 40-142 6-132 (160)
44 1hv2_A Elongin C, ELC1; protei 98.4 4.3E-07 1.5E-11 67.7 5.1 79 40-120 6-99 (99)
45 2fnj_C Transcription elongatio 98.3 4.1E-07 1.4E-11 67.4 4.0 80 40-120 3-96 (96)
46 3v7d_A Suppressor of kinetocho 98.1 5.9E-06 2E-10 68.2 6.7 98 39-137 8-135 (169)
47 3drz_A BTB/POZ domain-containi 98.1 1.1E-05 3.6E-10 61.2 7.3 94 39-133 7-106 (107)
48 1vcb_B Protein (elongin C); tu 97.8 8.8E-06 3E-10 61.9 3.4 81 39-120 18-112 (112)
49 3mbr_X Glutamine cyclotransfer 97.8 0.0017 5.7E-08 56.8 18.2 148 287-456 30-181 (243)
50 3mbr_X Glutamine cyclotransfer 97.7 0.0012 4E-08 57.8 14.4 122 318-456 12-135 (243)
51 3nol_A Glutamine cyclotransfer 97.6 0.0028 9.5E-08 55.9 16.5 148 287-456 52-203 (262)
52 3i3n_A Kelch-like protein 11; 97.6 8E-06 2.7E-10 74.4 0.3 135 60-194 94-251 (279)
53 3nok_A Glutaminyl cyclase; bet 97.5 0.0048 1.6E-07 54.5 16.2 145 287-456 64-212 (268)
54 3dsm_A Uncharacterized protein 97.4 0.016 5.4E-07 53.7 19.8 153 286-458 93-257 (328)
55 3dsm_A Uncharacterized protein 97.4 0.019 6.5E-07 53.2 20.3 154 286-459 52-217 (328)
56 3hve_A Gigaxonin; ubiquitin, c 97.4 6E-06 2E-10 74.2 -4.2 134 60-194 86-243 (256)
57 3nol_A Glutamine cyclotransfer 97.4 0.0016 5.4E-08 57.5 11.2 124 316-456 32-157 (262)
58 2iwa_A Glutamine cyclotransfer 97.2 0.031 1E-06 49.7 18.5 148 287-456 31-183 (266)
59 2eqx_A Kelch repeat and BTB do 97.0 0.00053 1.8E-08 51.7 3.6 66 100-166 5-82 (105)
60 3nok_A Glutaminyl cyclase; bet 97.0 0.0086 2.9E-07 52.9 11.8 109 328-456 58-166 (268)
61 3drx_A BTB/POZ domain-containi 96.9 0.00097 3.3E-08 55.7 5.0 92 40-132 14-111 (202)
62 3q7m_A Lipoprotein YFGL, BAMB; 96.9 0.12 4.1E-06 48.6 20.2 150 283-460 49-215 (376)
63 2iwa_A Glutamine cyclotransfer 96.8 0.027 9.1E-07 50.1 14.1 124 316-456 10-137 (266)
64 3q7m_A Lipoprotein YFGL, BAMB; 96.7 0.16 5.6E-06 47.6 20.1 142 286-459 187-344 (376)
65 1l0q_A Surface layer protein; 96.0 0.047 1.6E-06 51.5 11.7 145 288-459 2-152 (391)
66 1q7f_A NHL, brain tumor CG1071 96.0 0.77 2.6E-05 40.8 19.1 151 286-456 87-240 (286)
67 1rwi_B Serine/threonine-protei 95.9 0.75 2.6E-05 40.4 18.6 147 286-457 33-183 (270)
68 1l0q_A Surface layer protein; 95.8 0.086 3E-06 49.6 12.5 144 287-457 43-192 (391)
69 3jrp_A Fusion protein of prote 95.8 0.17 5.7E-06 47.1 14.1 148 287-455 22-192 (379)
70 3bws_A Protein LP49; two-domai 95.6 0.22 7.5E-06 47.5 14.6 138 304-458 102-247 (433)
71 1q7f_A NHL, brain tumor CG1071 95.3 1.4 4.8E-05 39.0 20.0 154 286-460 39-200 (286)
72 2z2n_A Virginiamycin B lyase; 95.3 1.4 4.9E-05 39.0 20.2 148 286-460 66-218 (299)
73 1yiq_A Quinohemoprotein alcoho 95.3 1.9 6.6E-05 44.2 20.9 118 283-413 66-200 (689)
74 3fm0_A Protein CIAO1; WDR39,SG 95.2 0.31 1.1E-05 45.1 13.5 153 287-460 27-187 (345)
75 2ad6_A Methanol dehydrogenase 95.1 1.2 4E-05 44.6 18.4 120 283-413 58-193 (571)
76 2z2n_A Virginiamycin B lyase; 95.1 1.6 5.6E-05 38.6 20.4 151 285-460 23-176 (299)
77 2qc5_A Streptogramin B lactona 95.1 1.7 5.7E-05 38.6 19.7 150 285-460 28-181 (300)
78 1rwi_B Serine/threonine-protei 95.1 0.75 2.5E-05 40.4 15.4 146 286-456 76-224 (270)
79 1kb0_A Quinohemoprotein alcoho 95.1 1.4 4.8E-05 45.0 19.2 120 283-414 73-208 (677)
80 1k8k_C P40, ARP2/3 complex 41 94.9 0.51 1.7E-05 43.7 14.5 146 287-453 19-172 (372)
81 3fvz_A Peptidyl-glycine alpha- 94.9 2.3 7.7E-05 38.8 21.7 142 303-458 69-231 (329)
82 3dwl_C Actin-related protein 2 94.8 0.12 4.1E-06 48.3 9.7 146 287-453 22-176 (377)
83 2qc5_A Streptogramin B lactona 94.8 2 6.9E-05 38.1 19.5 148 286-460 71-223 (300)
84 2pm7_B Protein transport prote 94.7 0.86 2.9E-05 40.9 14.8 107 286-408 19-133 (297)
85 1ri6_A Putative isomerase YBHE 94.7 0.75 2.6E-05 41.9 14.7 170 287-476 140-332 (343)
86 1p22_A F-BOX/WD-repeat protein 94.6 0.3 1E-05 46.8 12.2 146 287-456 182-327 (435)
87 4ery_A WD repeat-containing pr 94.6 0.73 2.5E-05 41.6 14.3 143 287-456 34-182 (312)
88 1kv9_A Type II quinohemoprotei 94.6 3.4 0.00012 42.1 20.5 119 283-413 62-195 (668)
89 1p22_A F-BOX/WD-repeat protein 94.5 0.91 3.1E-05 43.4 15.5 146 286-456 141-287 (435)
90 1gxr_A ESG1, transducin-like e 94.5 0.64 2.2E-05 42.2 13.8 146 287-456 108-257 (337)
91 2ovr_B FBW7, F-BOX/WD repeat p 94.5 1 3.5E-05 43.1 15.8 110 330-457 284-394 (445)
92 4ery_A WD repeat-containing pr 94.5 1.1 3.8E-05 40.4 15.2 146 287-456 76-225 (312)
93 1gxr_A ESG1, transducin-like e 94.4 0.79 2.7E-05 41.5 14.3 147 287-456 62-216 (337)
94 3vgz_A Uncharacterized protein 94.3 0.93 3.2E-05 41.5 14.5 152 287-456 52-217 (353)
95 1got_B GT-beta; complex (GTP-b 94.3 1.8 6.1E-05 39.7 16.3 133 304-455 165-302 (340)
96 3jrp_A Fusion protein of prote 94.3 1.3 4.5E-05 40.8 15.6 147 288-455 69-241 (379)
97 4aez_A CDC20, WD repeat-contai 94.2 1.2 4.2E-05 41.9 15.5 134 303-456 113-250 (401)
98 3v9f_A Two-component system se 94.2 1.7 5.8E-05 45.3 17.7 138 303-461 469-618 (781)
99 3ow8_A WD repeat-containing pr 94.2 0.93 3.2E-05 41.4 14.0 146 287-456 133-281 (321)
100 3htm_A Speckle-type POZ protei 94.2 0.0064 2.2E-07 50.4 -0.8 76 61-136 88-165 (172)
101 2ovr_B FBW7, F-BOX/WD repeat p 94.1 2.3 7.8E-05 40.6 17.4 138 304-454 300-442 (445)
102 2dg1_A DRP35, lactonase; beta 94.1 0.64 2.2E-05 42.5 12.9 155 286-454 54-213 (333)
103 2hqs_A Protein TOLB; TOLB, PAL 94.1 1.1 3.6E-05 42.8 14.8 159 287-461 189-351 (415)
104 3vgz_A Uncharacterized protein 94.1 3.4 0.00012 37.6 19.6 151 287-459 100-267 (353)
105 4a2l_A BT_4663, two-component 94.0 4.7 0.00016 42.0 20.7 150 286-461 97-251 (795)
106 1w6s_A Methanol dehydrogenase 94.0 2.1 7.2E-05 43.0 17.0 121 283-414 58-200 (599)
107 1jmx_B Amine dehydrogenase; ox 94.0 0.38 1.3E-05 44.0 11.1 154 285-457 8-178 (349)
108 3v7d_B Cell division control p 93.9 3.6 0.00012 39.3 18.5 134 304-458 291-425 (464)
109 2hes_X YDR267CP; beta-propelle 93.8 0.75 2.6E-05 42.1 12.7 153 287-460 118-286 (330)
110 3ow8_A WD repeat-containing pr 93.8 1.5 5.1E-05 40.0 14.7 144 288-456 92-239 (321)
111 3kvt_A Potassium channel prote 93.8 0.029 9.8E-07 42.6 2.3 84 40-124 7-93 (115)
112 2pbi_B Guanine nucleotide-bind 93.8 2.2 7.6E-05 39.4 16.0 133 303-455 176-316 (354)
113 3ott_A Two-component system se 93.7 2 6.8E-05 44.6 17.1 140 286-453 481-625 (758)
114 2hqs_A Protein TOLB; TOLB, PAL 93.7 1.5 5E-05 41.8 14.8 145 303-462 247-395 (415)
115 3bws_A Protein LP49; two-domai 93.6 0.79 2.7E-05 43.6 13.0 149 287-456 180-336 (433)
116 4e54_B DNA damage-binding prot 93.6 0.78 2.7E-05 43.9 12.9 146 287-454 131-282 (435)
117 3jro_A Fusion protein of prote 93.6 0.74 2.5E-05 47.8 13.5 106 287-408 20-133 (753)
118 3fvz_A Peptidyl-glycine alpha- 93.6 4.2 0.00014 37.0 19.1 153 287-453 154-321 (329)
119 1itv_A MMP9; adaptive molecula 93.6 2.5 8.7E-05 35.3 14.2 141 285-456 14-176 (195)
120 1vyh_C Platelet-activating fac 93.5 1.1 3.7E-05 42.5 13.6 145 287-457 119-268 (410)
121 3c5m_A Oligogalacturonate lyas 93.4 1.7 5.8E-05 40.5 14.8 149 303-460 216-390 (396)
122 3oyo_A Hemopexin fold protein 93.4 2.5 8.7E-05 36.2 14.3 136 286-453 12-197 (225)
123 4g56_B MGC81050 protein; prote 93.4 0.64 2.2E-05 43.2 11.5 143 288-454 194-343 (357)
124 3g4e_A Regucalcin; six bladed 93.3 1.3 4.5E-05 39.7 13.2 168 287-477 64-250 (297)
125 2aq5_A Coronin-1A; WD40 repeat 93.3 1.6 5.4E-05 41.1 14.3 152 287-455 93-255 (402)
126 1qhu_A Protein (hemopexin); be 93.2 3.7 0.00013 39.4 16.5 130 287-453 158-330 (460)
127 4gqb_B Methylosome protein 50; 93.2 1 3.4E-05 41.7 12.4 143 288-455 182-332 (344)
128 3bg1_A Protein SEC13 homolog; 93.1 0.8 2.7E-05 41.6 11.5 110 287-412 24-142 (316)
129 2aq5_A Coronin-1A; WD40 repeat 93.1 2.7 9.2E-05 39.4 15.6 151 289-456 145-301 (402)
130 4g56_B MGC81050 protein; prote 93.0 1.1 3.7E-05 41.6 12.5 147 287-457 150-304 (357)
131 4gqb_B Methylosome protein 50; 93.0 1.3 4.4E-05 40.9 12.9 135 304-455 104-247 (344)
132 4a2l_A BT_4663, two-component 92.9 3.8 0.00013 42.7 17.7 135 304-461 472-621 (795)
133 2p4o_A Hypothetical protein; p 92.9 5 0.00017 36.0 18.8 170 286-477 81-264 (306)
134 3vl1_A 26S proteasome regulato 92.9 4.3 0.00015 38.0 16.8 147 287-455 150-323 (420)
135 4aez_A CDC20, WD repeat-contai 92.9 1.1 3.9E-05 42.1 12.6 149 287-456 228-382 (401)
136 1pex_A Collagenase-3, MMP-13; 92.9 3.9 0.00013 34.5 18.0 138 285-456 31-194 (207)
137 3c5m_A Oligogalacturonate lyas 92.8 0.88 3E-05 42.5 11.6 152 303-461 168-336 (396)
138 1got_B GT-beta; complex (GTP-b 92.8 5.6 0.00019 36.2 17.2 146 287-456 108-259 (340)
139 3ei3_B DNA damage-binding prot 92.8 2.6 8.8E-05 39.1 14.9 143 289-454 87-236 (383)
140 3v9f_A Two-component system se 92.7 2.6 9E-05 43.8 16.1 138 304-461 384-531 (781)
141 1yiq_A Quinohemoprotein alcoho 92.6 2.2 7.4E-05 43.8 15.0 117 330-459 66-199 (689)
142 2z3z_A Dipeptidyl aminopeptida 92.5 3.1 0.00011 42.5 16.2 153 302-461 234-398 (706)
143 2bkl_A Prolyl endopeptidase; m 92.4 5 0.00017 41.1 17.6 170 286-461 130-314 (695)
144 3odt_A Protein DOA1; ubiquitin 92.4 1.9 6.3E-05 38.5 12.9 109 333-462 194-304 (313)
145 1s1g_A Potassium voltage-gated 92.4 0.067 2.3E-06 41.1 2.5 82 39-124 14-100 (124)
146 2pbi_B Guanine nucleotide-bind 92.3 3.2 0.00011 38.2 14.8 133 288-440 210-348 (354)
147 2dg1_A DRP35, lactonase; beta 92.3 2.1 7E-05 38.9 13.2 119 334-460 55-177 (333)
148 1erj_A Transcriptional repress 92.2 1.7 5.9E-05 40.8 12.8 144 287-454 134-287 (393)
149 1kb0_A Quinohemoprotein alcoho 92.1 2.3 7.9E-05 43.4 14.4 118 329-459 72-206 (677)
150 3hfq_A Uncharacterized protein 92.1 1.3 4.6E-05 40.5 11.7 142 304-459 19-177 (347)
151 3fm0_A Protein CIAO1; WDR39,SG 92.1 1.8 6.1E-05 39.8 12.6 138 287-440 72-216 (345)
152 2vdu_B TRNA (guanine-N(7)-)-me 92.0 4.4 0.00015 38.7 15.7 151 287-457 114-274 (450)
153 4gga_A P55CDC, cell division c 91.9 3.9 0.00013 38.6 15.2 93 303-408 125-219 (420)
154 4e54_B DNA damage-binding prot 91.9 1.4 4.9E-05 42.0 12.0 144 287-454 176-327 (435)
155 1kv9_A Type II quinohemoprotei 91.9 2.8 9.5E-05 42.8 14.7 118 329-459 61-194 (668)
156 2xdw_A Prolyl endopeptidase; a 91.8 7.1 0.00024 40.0 18.0 171 286-461 134-330 (710)
157 3u4y_A Uncharacterized protein 91.8 1.4 4.9E-05 39.9 11.5 144 287-453 9-159 (331)
158 3ei3_B DNA damage-binding prot 91.8 2 6.8E-05 39.9 12.7 144 287-455 130-283 (383)
159 3iz6_a 40S ribosomal protein R 91.6 5.4 0.00019 37.1 15.5 147 287-455 217-376 (380)
160 1t1d_A Protein (potassium chan 91.6 0.068 2.3E-06 39.3 1.6 84 40-124 3-90 (100)
161 2ynn_A Coatomer subunit beta'; 91.6 3 0.0001 37.4 13.3 143 287-454 24-172 (304)
162 1vyh_C Platelet-activating fac 91.5 3.7 0.00013 38.8 14.4 104 287-410 161-268 (410)
163 2hz6_A Endoplasmic reticulum t 91.5 0.11 3.6E-06 49.0 3.4 143 284-459 6-156 (369)
164 3no2_A Uncharacterized protein 91.5 4 0.00014 36.2 13.7 148 285-459 45-202 (276)
165 3vl1_A 26S proteasome regulato 91.4 1 3.4E-05 42.6 10.3 133 303-456 78-214 (420)
166 3c7x_A Matrix metalloproteinas 91.4 5.3 0.00018 33.4 13.4 141 285-456 13-177 (196)
167 3v7d_B Cell division control p 91.4 6.3 0.00021 37.6 16.1 122 304-440 333-454 (464)
168 1pgu_A Actin interacting prote 91.3 5.9 0.0002 39.3 16.5 131 303-454 467-614 (615)
169 2ad6_A Methanol dehydrogenase 91.2 3.1 0.00011 41.5 13.9 119 329-459 57-192 (571)
170 3lrv_A PRE-mRNA-splicing facto 91.1 8.8 0.0003 34.9 16.7 150 287-459 138-299 (343)
171 3scy_A Hypothetical bacterial 90.9 5.4 0.00018 36.6 14.6 112 287-408 12-130 (361)
172 3zwl_B Eukaryotic translation 90.8 3.7 0.00013 37.4 13.5 148 287-454 43-206 (369)
173 1nir_A Nitrite reductase; hemo 90.8 5.6 0.00019 39.3 15.3 146 285-455 146-312 (543)
174 2vdu_B TRNA (guanine-N(7)-)-me 90.8 8.8 0.0003 36.5 16.5 156 288-458 210-397 (450)
175 2ojh_A Uncharacterized protein 90.7 7.9 0.00027 33.7 15.4 156 287-461 52-213 (297)
176 4a11_B DNA excision repair pro 90.7 2.4 8.1E-05 39.5 12.1 147 287-455 55-219 (408)
177 2xdw_A Prolyl endopeptidase; a 90.6 16 0.00054 37.3 19.1 148 302-461 258-423 (710)
178 1flg_A Protein (quinoprotein e 90.6 11 0.00037 37.6 17.2 116 283-412 64-200 (582)
179 3azo_A Aminopeptidase; POP fam 90.6 6.2 0.00021 39.9 15.9 146 303-460 217-375 (662)
180 4ggc_A P55CDC, cell division c 90.5 6.9 0.00024 34.7 14.8 135 303-455 45-182 (318)
181 3bg1_A Protein SEC13 homolog; 90.4 2 7E-05 38.8 11.0 114 336-467 180-307 (316)
182 1su3_A Interstitial collagenas 90.4 5.9 0.0002 38.0 14.4 142 285-457 270-435 (450)
183 3gre_A Serine/threonine-protei 90.4 9.3 0.00032 36.0 16.2 149 287-456 181-361 (437)
184 2nz0_B Potassium voltage-gated 90.4 0.19 6.4E-06 39.5 3.2 82 39-124 36-122 (140)
185 3frx_A Guanine nucleotide-bind 90.4 5.4 0.00018 36.0 13.9 143 287-455 76-228 (319)
186 3ba0_A Macrophage metalloelast 90.4 11 0.00036 35.1 15.7 145 285-459 188-355 (365)
187 1k8k_C P40, ARP2/3 complex 41 90.3 10 0.00036 34.5 16.8 71 382-463 213-285 (372)
188 4aow_A Guanine nucleotide-bind 90.3 3.4 0.00012 37.3 12.5 144 288-455 185-338 (340)
189 2hes_X YDR267CP; beta-propelle 90.2 1.5 5.1E-05 40.1 9.9 146 287-453 164-327 (330)
190 3mkq_A Coatomer beta'-subunit; 90.2 3.8 0.00013 42.6 14.3 145 287-455 24-173 (814)
191 1r5m_A SIR4-interacting protei 90.2 3.6 0.00012 38.5 12.9 142 290-456 219-363 (425)
192 3zwl_B Eukaryotic translation 90.2 2.9 0.0001 38.2 12.1 149 287-456 186-348 (369)
193 2ynn_A Coatomer subunit beta'; 90.1 6.3 0.00022 35.2 14.0 106 334-456 152-261 (304)
194 3lrv_A PRE-mRNA-splicing facto 90.1 11 0.00037 34.3 16.2 148 286-456 46-203 (343)
195 3hqi_A Speckle-type POZ protei 90.1 0.029 1E-06 51.5 -1.9 77 60-136 227-305 (312)
196 1pby_B Quinohemoprotein amine 90.1 3 0.0001 37.6 11.9 139 303-457 11-166 (337)
197 1sq9_A Antiviral protein SKI8; 90.0 2.9 0.0001 38.8 12.1 111 287-410 197-325 (397)
198 3i2n_A WD repeat-containing pr 89.9 7.2 0.00025 35.3 14.6 151 288-456 31-201 (357)
199 3jro_A Fusion protein of prote 89.9 1.6 5.4E-05 45.3 10.9 106 334-455 20-133 (753)
200 1r5m_A SIR4-interacting protei 89.9 8.3 0.00028 35.8 15.3 134 304-456 172-321 (425)
201 3lp9_A LS-24; SEED albumin, pl 89.7 2.4 8.1E-05 36.5 10.0 141 286-455 14-202 (227)
202 2ojh_A Uncharacterized protein 89.5 4.3 0.00015 35.5 12.3 145 301-461 20-169 (297)
203 3no2_A Uncharacterized protein 89.5 6.5 0.00022 34.8 13.3 146 288-459 5-161 (276)
204 1qhu_A Protein (hemopexin); be 89.4 10 0.00035 36.3 15.1 95 287-408 107-216 (460)
205 1erj_A Transcriptional repress 89.4 4 0.00014 38.2 12.4 104 334-456 134-240 (393)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 89.3 11 0.00038 33.4 15.7 152 286-453 27-206 (314)
207 3dwl_C Actin-related protein 2 89.3 0.73 2.5E-05 42.8 7.1 107 334-456 22-133 (377)
208 2pm9_A Protein WEB1, protein t 89.2 7.7 0.00026 36.1 14.5 148 288-455 178-338 (416)
209 1npe_A Nidogen, entactin; glyc 89.2 10 0.00036 32.9 20.5 147 287-457 90-241 (267)
210 3iz6_a 40S ribosomal protein R 89.1 11 0.00037 35.0 15.2 137 303-457 180-332 (380)
211 2z3z_A Dipeptidyl aminopeptida 89.1 6.4 0.00022 40.1 14.7 147 301-456 282-437 (706)
212 3mkq_A Coatomer beta'-subunit; 89.0 3.9 0.00013 42.5 13.2 147 287-456 66-219 (814)
213 2ghs_A AGR_C_1268P; regucalcin 88.8 9 0.00031 34.7 14.1 142 287-453 60-209 (326)
214 1nn7_A Potassium channel KV4.2 88.7 0.1 3.5E-06 38.9 0.5 80 40-123 2-86 (105)
215 2pm7_B Protein transport prote 88.5 3 0.0001 37.3 10.4 106 334-455 20-133 (297)
216 4aow_A Guanine nucleotide-bind 88.1 11 0.00037 33.8 14.2 146 287-455 97-247 (340)
217 3hrp_A Uncharacterized protein 87.9 14 0.00049 34.8 15.2 147 285-455 139-299 (409)
218 2xbg_A YCF48-like protein; pho 87.8 16 0.00053 33.2 16.3 148 287-461 132-286 (327)
219 1flg_A Protein (quinoprotein e 87.7 9.6 0.00033 38.0 14.4 117 329-459 63-200 (582)
220 1sq9_A Antiviral protein SKI8; 87.7 7.2 0.00025 36.1 13.0 146 289-456 27-218 (397)
221 3iuj_A Prolyl endopeptidase; h 87.5 27 0.00091 35.6 18.0 169 286-461 138-324 (693)
222 1yr2_A Prolyl oligopeptidase; 87.5 11 0.00037 38.8 15.2 150 301-462 292-449 (741)
223 3azo_A Aminopeptidase; POP fam 87.5 6.2 0.00021 39.9 13.2 148 303-461 161-332 (662)
224 2fp8_A Strictosidine synthase; 87.3 11 0.00038 33.9 13.7 135 303-455 165-314 (322)
225 3i2n_A WD repeat-containing pr 87.3 5.2 0.00018 36.3 11.6 143 287-454 128-291 (357)
226 4a11_B DNA excision repair pro 87.3 5.2 0.00018 37.1 11.8 146 287-456 111-278 (408)
227 3sfz_A APAF-1, apoptotic pepti 87.2 5.5 0.00019 43.8 13.5 143 287-455 626-775 (1249)
228 3k26_A Polycomb protein EED; W 87.1 7.4 0.00025 35.3 12.6 105 288-409 85-194 (366)
229 3b7f_A Glycosyl hydrolase, BNR 87.1 12 0.00042 34.9 14.3 143 305-461 33-215 (394)
230 3e5z_A Putative gluconolactona 86.9 16 0.00053 32.3 15.7 153 286-460 78-252 (296)
231 1pjx_A Dfpase, DIISOPROPYLFLUO 86.9 16 0.00055 32.3 15.8 150 286-456 80-258 (314)
232 3e5z_A Putative gluconolactona 86.6 11 0.00036 33.4 13.0 148 288-457 40-206 (296)
233 2bkl_A Prolyl endopeptidase; m 86.5 22 0.00076 36.1 16.8 144 303-455 202-352 (695)
234 1ri6_A Putative isomerase YBHE 86.5 7.3 0.00025 35.0 12.1 151 287-458 4-165 (343)
235 1w6s_A Methanol dehydrogenase 86.4 7.1 0.00024 39.1 12.6 120 329-460 57-199 (599)
236 3k6s_A Integrin alpha-X; cell 86.2 12 0.0004 40.6 14.7 157 323-481 332-515 (1095)
237 2pm9_A Protein WEB1, protein t 86.2 21 0.00072 33.0 16.7 151 289-457 26-200 (416)
238 1pgu_A Actin interacting prote 86.0 9.4 0.00032 37.8 13.5 143 290-454 175-328 (615)
239 3mmy_A MRNA export factor; mRN 86.0 19 0.00066 32.4 17.4 142 288-455 54-200 (368)
240 1pex_A Collagenase-3, MMP-13; 85.7 15 0.00051 30.9 12.9 100 287-409 79-194 (207)
241 1yfq_A Cell cycle arrest prote 85.7 9.8 0.00034 34.2 12.5 144 287-454 22-179 (342)
242 3pe7_A Oligogalacturonate lyas 85.5 5.1 0.00018 37.1 10.7 150 302-457 215-387 (388)
243 3g4e_A Regucalcin; six bladed 85.5 19 0.00065 31.9 16.5 141 287-452 24-178 (297)
244 1nir_A Nitrite reductase; hemo 85.4 5.6 0.00019 39.3 11.2 150 287-458 190-359 (543)
245 3iuj_A Prolyl endopeptidase; h 85.4 29 0.001 35.3 17.0 147 303-462 259-413 (693)
246 1yr2_A Prolyl oligopeptidase; 85.1 19 0.00064 37.0 15.5 169 287-461 173-359 (741)
247 4h5i_A Guanine nucleotide-exch 85.0 23 0.0008 32.5 15.4 150 287-454 187-343 (365)
248 3sfz_A APAF-1, apoptotic pepti 84.8 12 0.0004 41.2 14.6 133 304-455 984-1117(1249)
249 3dr2_A Exported gluconolactona 84.5 10 0.00035 33.9 11.8 157 286-460 95-273 (305)
250 3odt_A Protein DOA1; ubiquitin 84.5 20 0.0007 31.4 15.3 146 287-456 70-216 (313)
251 3dr2_A Exported gluconolactona 84.4 9.5 0.00033 34.0 11.5 152 288-456 57-226 (305)
252 1qks_A Cytochrome CD1 nitrite 84.3 16 0.00056 36.2 14.0 103 286-409 165-277 (567)
253 3dm0_A Maltose-binding peripla 84.3 15 0.00051 37.4 14.2 106 334-455 483-593 (694)
254 2p4o_A Hypothetical protein; p 84.2 22 0.00075 31.7 13.9 125 314-455 21-148 (306)
255 3u4y_A Uncharacterized protein 84.0 7.2 0.00025 35.0 10.7 107 334-458 9-121 (331)
256 3ott_A Two-component system se 83.8 28 0.00094 35.9 16.2 107 334-460 482-592 (758)
257 3f3f_A Nucleoporin SEH1; struc 83.6 23 0.0008 31.4 16.1 107 287-409 22-145 (351)
258 3mmy_A MRNA export factor; mRN 83.2 7.1 0.00024 35.4 10.4 104 335-456 54-162 (368)
259 1npe_A Nidogen, entactin; glyc 82.7 23 0.00079 30.6 19.0 146 287-455 47-199 (267)
260 2xyi_A Probable histone-bindin 82.4 5.9 0.0002 37.6 9.7 148 287-458 243-414 (430)
261 4h5i_A Guanine nucleotide-exch 82.4 30 0.001 31.7 14.8 139 303-456 157-302 (365)
262 3m0c_C LDL receptor, low-densi 82.2 50 0.0017 34.2 18.6 132 329-479 475-615 (791)
263 1jmx_B Amine dehydrogenase; ox 82.0 4 0.00014 37.0 8.1 68 334-412 10-79 (349)
264 2ecf_A Dipeptidyl peptidase IV 82.0 23 0.00078 36.2 14.6 115 287-415 47-189 (741)
265 1yfq_A Cell cycle arrest prote 81.7 28 0.00097 31.0 14.9 144 287-453 67-224 (342)
266 3k26_A Polycomb protein EED; W 81.6 7.4 0.00025 35.3 9.8 104 335-455 85-193 (366)
267 4gga_A P55CDC, cell division c 81.3 26 0.00089 32.8 13.8 102 334-453 288-394 (420)
268 3f3f_A Nucleoporin SEH1; struc 81.2 11 0.00037 33.7 10.7 106 334-455 22-144 (351)
269 1itv_A MMP9; adaptive molecula 81.0 12 0.0004 31.2 9.8 100 287-409 64-176 (195)
270 3b7f_A Glycosyl hydrolase, BNR 80.5 37 0.0013 31.5 17.5 157 287-465 67-274 (394)
271 2xyi_A Probable histone-bindin 80.4 11 0.00038 35.6 10.9 103 337-454 196-309 (430)
272 3scy_A Hypothetical bacterial 80.3 34 0.0012 31.0 16.5 68 287-360 61-130 (361)
273 1hxn_A Hemopexin, HPX; heme, b 80.2 26 0.00089 29.7 15.7 137 286-453 27-196 (219)
274 3pe7_A Oligogalacturonate lyas 79.6 9 0.00031 35.3 9.8 154 303-461 168-336 (388)
275 2xzm_R RACK1; ribosome, transl 79.4 35 0.0012 30.7 15.4 63 287-361 87-151 (343)
276 2ecf_A Dipeptidyl peptidase IV 79.2 27 0.00092 35.6 14.1 143 304-455 264-416 (741)
277 4ggc_A P55CDC, cell division c 79.2 32 0.0011 30.1 13.5 92 350-453 221-314 (318)
278 3o4h_A Acylamino-acid-releasin 79.0 24 0.00084 34.7 13.3 138 303-458 90-231 (582)
279 4eoz_A Speckle-type POZ protei 78.8 0.16 5.6E-06 40.3 -2.4 66 60-125 78-145 (145)
280 1gen_A Gelatinase A; hydrolase 78.4 30 0.001 29.3 16.9 140 286-456 39-204 (218)
281 2ghs_A AGR_C_1268P; regucalcin 78.3 30 0.001 31.1 12.7 102 334-451 60-167 (326)
282 3dm0_A Maltose-binding peripla 78.2 32 0.0011 34.9 14.1 102 336-456 532-634 (694)
283 3gre_A Serine/threonine-protei 77.8 27 0.00093 32.7 12.8 107 334-456 181-294 (437)
284 3hxj_A Pyrrolo-quinoline quino 77.7 14 0.00048 33.0 10.3 90 305-413 80-173 (330)
285 2hz6_A Endoplasmic reticulum t 77.5 0.81 2.8E-05 42.8 1.7 64 332-411 7-74 (369)
286 2gop_A Trilobed protease; beta 77.1 20 0.00067 32.3 11.2 141 303-461 85-258 (347)
287 3v65_B Low-density lipoprotein 76.5 49 0.0017 30.7 19.8 143 287-455 127-278 (386)
288 3c7x_A Matrix metalloproteinas 76.0 25 0.00085 29.2 10.3 100 330-455 11-128 (196)
289 2gop_A Trilobed protease; beta 74.1 18 0.00063 32.5 10.1 143 301-460 41-213 (347)
290 3v64_C Agrin; beta propeller, 73.9 53 0.0018 29.9 21.2 165 287-479 84-258 (349)
291 3hxj_A Pyrrolo-quinoline quino 73.7 48 0.0016 29.3 13.1 132 287-454 107-244 (330)
292 1nr0_A Actin interacting prote 73.3 76 0.0026 31.4 19.0 151 287-459 201-360 (611)
293 3tc9_A Hypothetical hydrolase; 72.6 28 0.00095 33.0 11.1 143 287-453 149-300 (430)
294 1qks_A Cytochrome CD1 nitrite 72.5 70 0.0024 31.6 14.3 150 287-456 208-375 (567)
295 1n7d_A LDL receptor, low-densi 72.3 67 0.0023 32.7 14.5 146 286-456 463-616 (699)
296 2ece_A 462AA long hypothetical 71.7 63 0.0022 30.8 12.9 67 287-361 95-175 (462)
297 1k32_A Tricorn protease; prote 71.4 24 0.00081 38.0 11.5 144 304-460 318-467 (1045)
298 1ck7_A Protein (gelatinase A); 71.0 28 0.00096 34.8 10.8 143 285-456 451-617 (631)
299 2xbg_A YCF48-like protein; pho 70.9 59 0.002 29.2 19.9 150 287-461 46-200 (327)
300 3hrp_A Uncharacterized protein 70.9 32 0.0011 32.2 11.1 115 329-460 135-255 (409)
301 1ijq_A LDL receptor, low-densi 70.6 59 0.002 29.0 20.0 167 287-479 41-221 (316)
302 1n7d_A LDL receptor, low-densi 70.6 36 0.0012 34.7 12.1 146 287-460 417-577 (699)
303 2xe4_A Oligopeptidase B; hydro 70.5 1E+02 0.0034 31.7 16.2 98 302-405 294-398 (751)
304 3k6s_A Integrin alpha-X; cell 70.3 1.2E+02 0.0042 32.6 19.1 164 292-457 347-545 (1095)
305 3hfq_A Uncharacterized protein 69.2 11 0.00037 34.2 7.2 94 351-453 19-116 (347)
306 1gen_A Gelatinase A; hydrolase 68.3 44 0.0015 28.2 10.2 102 287-409 87-204 (218)
307 3o4h_A Acylamino-acid-releasin 68.0 8.6 0.0003 38.1 6.7 98 306-412 135-232 (582)
308 3lp9_A LS-24; SEED albumin, pl 68.0 22 0.00074 30.4 8.3 63 380-456 70-149 (227)
309 3ba0_A Macrophage metalloelast 67.7 74 0.0025 29.3 12.5 105 287-412 236-355 (365)
310 1ijq_A LDL receptor, low-densi 67.3 69 0.0024 28.6 19.0 146 286-455 87-239 (316)
311 2fp8_A Strictosidine synthase; 67.0 69 0.0024 28.5 13.4 137 303-454 40-216 (322)
312 1pby_B Quinohemoprotein amine 66.8 41 0.0014 29.7 10.7 110 337-457 3-127 (337)
313 3m0c_C LDL receptor, low-densi 66.8 1.2E+02 0.0042 31.3 20.1 131 303-453 493-631 (791)
314 1hxn_A Hemopexin, HPX; heme, b 64.1 44 0.0015 28.3 9.3 93 333-453 27-143 (219)
315 3frx_A Guanine nucleotide-bind 63.0 57 0.002 29.0 10.8 141 288-454 166-317 (319)
316 1xfd_A DIP, dipeptidyl aminope 62.9 75 0.0026 32.1 12.9 58 302-365 90-149 (723)
317 2xzm_R RACK1; ribosome, transl 61.9 89 0.003 27.9 16.0 63 334-408 87-150 (343)
318 3p5b_L Low density lipoprotein 61.8 1E+02 0.0035 28.6 18.1 168 287-479 123-303 (400)
319 2mad_H Methylamine dehydrogena 61.8 98 0.0034 28.4 18.5 86 382-476 278-371 (373)
320 3oyo_A Hemopexin fold protein 61.1 58 0.002 27.6 9.7 104 333-458 12-149 (225)
321 3vu4_A KMHSV2; beta-propeller 60.5 97 0.0033 28.0 17.9 64 382-455 206-272 (355)
322 2ymu_A WD-40 repeat protein; u 59.9 90 0.0031 30.3 12.5 102 334-455 437-540 (577)
323 3v4v_A Integrin alpha-4; cell 59.8 1.4E+02 0.0048 29.6 14.0 153 326-481 167-348 (597)
324 1k32_A Tricorn protease; prote 59.7 69 0.0024 34.3 12.3 104 303-414 358-468 (1045)
325 2p9w_A MAL S 1 allergenic prot 57.9 1.1E+02 0.0038 27.7 14.1 140 283-438 143-304 (334)
326 3ju4_A Endo-N-acetylneuraminid 57.6 1.2E+02 0.0042 28.2 15.4 65 327-391 341-406 (670)
327 1nr0_A Actin interacting prote 57.5 1.5E+02 0.0052 29.2 15.6 110 287-413 250-361 (611)
328 2oiz_A Aromatic amine dehydrog 57.0 1.1E+02 0.0039 27.7 15.8 82 382-473 265-354 (361)
329 3ju4_A Endo-N-acetylneuraminid 55.5 1.3E+02 0.0046 28.0 13.3 129 310-438 267-406 (670)
330 2xe4_A Oligopeptidase B; hydro 54.7 1.9E+02 0.0065 29.5 15.5 164 287-459 185-360 (751)
331 4hvt_A Ritya.17583.B, post-pro 53.7 1.9E+02 0.0067 29.3 14.8 149 303-463 269-438 (711)
332 3dw8_B Serine/threonine-protei 53.2 1.4E+02 0.0048 27.5 13.4 107 336-459 240-378 (447)
333 3tc9_A Hypothetical hydrolase; 51.5 58 0.002 30.8 9.0 105 334-457 149-260 (430)
334 2vkp_A BTB/POZ domain-containi 51.5 45 0.0015 24.1 6.6 42 125-166 64-108 (109)
335 2oaj_A Protein SNI1; WD40 repe 50.5 1.9E+02 0.0064 30.4 13.5 136 303-457 79-245 (902)
336 2ymu_A WD-40 repeat protein; u 50.3 94 0.0032 30.1 10.8 92 334-440 478-571 (577)
337 2r9r_B Paddle chimera voltage 48.8 9.2 0.00031 37.4 2.9 85 39-124 53-141 (514)
338 3c75_H MADH, methylamine dehyd 47.8 65 0.0022 30.5 8.5 115 287-410 84-212 (426)
339 4hw6_A Hypothetical protein, I 47.8 1.8E+02 0.0063 27.3 13.8 143 287-453 152-303 (433)
340 3dw8_B Serine/threonine-protei 47.6 1.7E+02 0.0059 26.9 12.8 27 381-412 352-378 (447)
341 3v65_B Low-density lipoprotein 43.3 2E+02 0.0068 26.4 19.4 143 286-454 169-318 (386)
342 1fwx_A Nitrous oxide reductase 43.2 1.3E+02 0.0043 29.9 9.9 155 287-455 101-309 (595)
343 3a0f_A Xyloglucanase; beta-pro 41.6 3.1E+02 0.01 28.1 16.1 150 288-461 557-724 (763)
344 3v64_C Agrin; beta propeller, 39.3 2.2E+02 0.0074 25.7 21.1 145 286-455 126-276 (349)
345 2oiz_A Aromatic amine dehydrog 38.6 85 0.0029 28.6 7.8 114 335-456 16-142 (361)
346 3c75_H MADH, methylamine dehyd 38.5 71 0.0024 30.2 7.2 114 334-456 84-211 (426)
347 1r29_A B-cell lymphoma 6 prote 37.2 78 0.0027 23.6 6.1 42 125-166 82-126 (127)
348 2oaj_A Protein SNI1; WD40 repe 36.1 1.9E+02 0.0066 30.3 10.9 103 334-456 28-131 (902)
349 2yy9_A Zinc finger and BTB dom 35.8 38 0.0013 25.9 4.1 46 124-169 73-121 (135)
350 2qe8_A Uncharacterized protein 35.8 2.4E+02 0.0081 25.1 13.0 127 328-460 20-161 (343)
351 3ei3_A DNA damage-binding prot 35.5 4.3E+02 0.015 28.7 13.5 122 304-437 865-987 (1158)
352 1fwx_A Nitrous oxide reductase 35.4 1.1E+02 0.0038 30.3 8.1 162 303-475 254-452 (595)
353 3vu4_A KMHSV2; beta-propeller 34.8 2.5E+02 0.0085 25.1 15.2 65 334-408 206-272 (355)
354 2oit_A Nucleoporin 214KDA; NH2 34.2 2.9E+02 0.01 25.7 13.6 154 287-456 104-280 (434)
355 2mad_H Methylamine dehydrogena 34.2 2.7E+02 0.0093 25.4 15.6 115 287-411 32-160 (373)
356 3ei3_A DNA damage-binding prot 33.7 4.9E+02 0.017 28.2 13.9 158 304-475 808-978 (1158)
357 4gq1_A NUP37; propeller, trans 33.0 2.3E+02 0.0078 25.9 9.9 107 334-456 100-220 (393)
358 1su3_A Interstitial collagenas 32.9 1.6E+02 0.0056 27.9 8.7 63 287-363 367-436 (450)
359 2vpk_A Myoneurin; transcriptio 32.9 86 0.0029 22.9 5.6 40 125-164 73-115 (116)
360 1xfd_A DIP, dipeptidyl aminope 32.6 2E+02 0.007 28.8 10.2 104 304-414 38-150 (723)
361 2q81_A MIZ-1 protein; BTB/POZ 31.7 1.2E+02 0.004 22.3 6.2 42 123-164 73-117 (119)
362 2cn3_A Xyloglucanase, beta-1,4 30.9 4.4E+02 0.015 26.8 19.2 107 352-460 224-343 (737)
363 3p5b_L Low density lipoprotein 30.9 3.2E+02 0.011 25.2 18.7 143 286-453 169-319 (400)
364 1ck7_A Protein (gelatinase A); 29.5 1.2E+02 0.0041 30.3 7.3 100 330-455 449-567 (631)
365 1z68_A Fibroblast activation p 28.9 4.5E+02 0.015 26.2 14.8 116 287-408 263-394 (719)
366 3b84_A Zinc finger and BTB dom 28.4 78 0.0027 23.3 4.7 42 125-166 73-117 (119)
367 3sjl_D Methylamine dehydrogena 26.9 1.8E+02 0.006 27.0 7.6 69 382-457 291-366 (386)
368 3qhy_B Beta-lactamase inhibito 26.5 1.6E+02 0.0053 25.8 7.0 16 376-391 191-206 (282)
369 2plx_B Peptide inhibitor; heli 26.4 66 0.0023 15.8 2.8 20 142-161 3-22 (26)
370 1mda_H Methylamine dehydrogena 26.1 1.6E+02 0.0054 27.1 7.2 86 382-476 275-366 (368)
371 3fcs_A Integrin, alpha 2B; bet 26.1 6.1E+02 0.021 26.8 12.6 152 326-481 169-369 (959)
372 2qe8_A Uncharacterized protein 25.5 3.6E+02 0.012 23.9 12.0 124 285-413 25-161 (343)
373 1buo_A POZ domain, protein (pr 25.3 1.4E+02 0.0047 21.9 5.6 41 125-165 76-119 (121)
374 1jof_A Carboxy-CIS,CIS-muconat 25.1 3.7E+02 0.013 24.0 16.9 55 303-362 167-229 (365)
375 3sjl_D Methylamine dehydrogena 24.8 2.1E+02 0.0072 26.5 7.8 70 334-411 291-367 (386)
376 2w18_A PALB2, fancn, partner a 24.5 4E+02 0.014 24.3 16.1 151 287-453 192-356 (356)
377 4a0p_A LRP6, LRP-6, low-densit 24.2 5.3E+02 0.018 25.6 19.6 169 287-480 48-221 (628)
378 2if5_A Zinc finger and BTB dom 23.0 1.7E+02 0.0058 21.3 5.7 39 125-163 78-119 (120)
379 4hw6_A Hypothetical protein, I 22.8 4.7E+02 0.016 24.4 11.1 104 335-457 153-262 (433)
380 2be1_A Serine/threonine-protei 22.2 1.6E+02 0.0056 26.7 6.3 64 287-363 10-80 (339)
381 2z8h_A Transcription regulator 21.9 32 0.0011 26.4 1.4 41 127-167 90-133 (138)
382 3sov_A LRP-6, low-density lipo 21.4 4.2E+02 0.015 23.4 20.8 169 287-480 46-222 (318)
383 3qhy_B Beta-lactamase inhibito 21.0 1.7E+02 0.0059 25.5 6.2 17 327-343 34-50 (282)
384 2ppi_A Gigaxonin; BTB domain, 20.8 1.1E+02 0.0039 23.4 4.4 39 125-163 102-143 (144)
385 4gq1_A NUP37; propeller, trans 20.8 3.3E+02 0.011 24.7 8.5 64 334-409 155-220 (393)
No 1
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=100.00 E-value=1.7e-41 Score=312.58 Aligned_cols=258 Identities=30% Similarity=0.541 Sum_probs=240.1
Q ss_pred CceeeecCCcHHHHHHHHHHHHhcCCceeEEEEeC---CeEEeceeEEeeccCHHHHHHhcCCCCcCccceEEEc-----
Q psy11333 11 ACLTHTSDKHPRVVLSEVSALRRHRELCDVVLNVG---ARKIFAHRVVLSACSPYFRAMFTGELAESRQAEVTIR----- 82 (482)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~i~~~---~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~~i~l~----- 82 (482)
+...|....|++.+++.+++++.++.+|||+|+++ |++|+|||.||+++|+||++||++++.|+.++.|.++
T Consensus 6 ~~~~~~~~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~ 85 (279)
T 3i3n_A 6 EAEDFECSSHCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSE 85 (279)
T ss_dssp CEEEEECTTHHHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSST
T ss_pred cccCcCCHhHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEecccccc
Confidence 34678999999999999999999999999999998 9999999999999999999999999999999999998
Q ss_pred -cCCHHHHHHHHHHhhcCeeeeccccHhhHHHHhcccChhhHHHHHHHHHhccCCCCCHHHHHHHHhhCCCHHHHHHHHH
Q psy11333 83 -DIDDVAMDNLIEFCYTSHITVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDPSNCLGIRAFADTHSCRDLLRIADK 161 (482)
Q Consensus 83 -~~~~~~~~~~l~~~y~~~~~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~ 161 (482)
++++.+|..+++|+|+|.+.++.+++.+++.+|++|+++.|++.|.+++.++++.+||+.++.+|..+++..|.+.|.+
T Consensus 86 ~~v~~~~f~~ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~ 165 (279)
T 3i3n_A 86 PGPEPDTVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKAAD 165 (279)
T ss_dssp TCSCHHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhhCcCCcccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHHHHHHHcCcHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHhcccccccCCHHHHhHhhcCCCcccCChHHHHHHHHHHHhcChhHHHHHHHHhhccccCCCCChhhHhhcc
Q psy11333 162 FTQHNFQEVMESEEFLILPVAQLVDIISSDELNVRSEEQVFNAIMSWLKYNVSERRQHLAQVLQHVRLPLLSPKFLVGTV 241 (482)
Q Consensus 162 ~i~~~~~~l~~~~~f~~l~~~~l~~il~~~~l~~~~e~~v~~~~~~wi~~~~~~~~~~~~~l~~~~r~~~~~~~~l~~~~ 241 (482)
|+..||.++..+++|..|+.+.+.++++++.|++.+|..+|+++++|++++++.|.+++..+++++||+.|++..|...+
T Consensus 166 ~i~~~f~~v~~~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~~~~r~~~~~~ll~~VRf~l~~~~~L~~~v 245 (279)
T 3i3n_A 166 MIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQMKPTYLTRHV 245 (279)
T ss_dssp HHHHTHHHHTTSSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTTHHHHTTTHHHHHTTSCGGGSCHHHHHHTT
T ss_pred HHHHHHHHHhcCcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcCHHHHHHHHHHHHHhcCCCCCCHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999998888899999999999999999999988
Q ss_pred cCcccccCChhhHHHHHHHHHHhcCCC
Q psy11333 242 GSDLLVRSDEACRDLVDEAKNYLLLPQ 268 (482)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (482)
...+++...+.|.+++.++.+++.++.
T Consensus 246 ~~~~l~~~~~~c~~~l~ea~~~~~~~~ 272 (279)
T 3i3n_A 246 KPERLVANNEVCVKLVADAVERHALRA 272 (279)
T ss_dssp TTSHHHHTCHHHHHHHHHHHHHHHHTT
T ss_pred hccchhcCCHHHHHHHHHHHHhccCch
Confidence 888888888999999999999988775
No 2
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=100.00 E-value=4.4e-41 Score=305.94 Aligned_cols=245 Identities=26% Similarity=0.532 Sum_probs=207.3
Q ss_pred eeeecCCcHHHHHHHHHHHHhcCCceeEEEEeCCeEEeceeEEeeccCHHHHHHhcCCCC--cCccceEEEccCCHHHHH
Q psy11333 13 LTHTSDKHPRVVLSEVSALRRHRELCDVVLNVGARKIFAHRVVLSACSPYFRAMFTGELA--ESRQAEVTIRDIDDVAMD 90 (482)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~i~~~~~~~~~hk~iL~~~S~~F~~~~~~~~~--e~~~~~i~l~~~~~~~~~ 90 (482)
..++...|+..+++.++++++++.+|||+|.++|++|+|||.||+++|+||++||++++. ++....|.++++++.+|.
T Consensus 7 ~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~ 86 (256)
T 3hve_A 7 SAVSDPQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMR 86 (256)
T ss_dssp ---CCTTTHHHHHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHH
T ss_pred CccCChHHHHHHHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHH
Confidence 567889999999999999999999999999999999999999999999999999999887 566778999999999999
Q ss_pred HHHHHhhcCeeeeccccHhhHHHHhcccChhhHHHHHHHHHhccCCCCCHHHHHHHHhhCCCHHHHHHHHHHHHHhHHHH
Q psy11333 91 NLIEFCYTSHITVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDPSNCLGIRAFADTHSCRDLLRIADKFTQHNFQEV 170 (482)
Q Consensus 91 ~~l~~~y~~~~~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~i~~~~~~l 170 (482)
.+++|+|++.+.++.+++.+++.+|++|++++|++.|.+++.++++.+||+.++.+|..+++..|.+.|.+|+..||.++
T Consensus 87 ~ll~~~Yt~~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v 166 (256)
T 3hve_A 87 EILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHVHYLATEYLETHFRDV 166 (256)
T ss_dssp HHHHHHHHSCCCCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhccCCCCcccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccccCCHHHHhHhhcCCCcccCChHHHHHHHHHHHhcChhHHHHHHHHhhccccCCCCChhhHhhcccCcccccCC
Q psy11333 171 MESEEFLILPVAQLVDIISSDELNVRSEEQVFNAIMSWLKYNVSERRQHLAQVLQHVRLPLLSPKFLVGTVGSDLLVRSD 250 (482)
Q Consensus 171 ~~~~~f~~l~~~~l~~il~~~~l~~~~e~~v~~~~~~wi~~~~~~~~~~~~~l~~~~r~~~~~~~~l~~~~~~~~~~~~~ 250 (482)
..+++|..|+.+.+.++++++.|++.+|..+|+++++|++++++.|.+++..+++++||+.|++.+|...+..++++...
T Consensus 167 ~~~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~~~~R~~~~~~ll~~VRf~~l~~~~l~~~v~~~~l~~~~ 246 (256)
T 3hve_A 167 SSTEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHDTEIRKVHMKDVMSALWVSGLDSSYLREQMLNEPLVREI 246 (256)
T ss_dssp TTCHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC--CCSTTTHHHHHHHHHHHTTCC-CHHHHHHTSTTHHHH
T ss_pred hCCcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcCHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhcChHHHhh
Confidence 99999999999999999999999999999999999999999988888899999999999999999999888888877655
Q ss_pred -hhhHHHH
Q psy11333 251 -EACRDLV 257 (482)
Q Consensus 251 -~~~~~~~ 257 (482)
..|.++.
T Consensus 247 ~~~c~~ll 254 (256)
T 3hve_A 247 VKECSNIP 254 (256)
T ss_dssp HCC-----
T ss_pred HHHHHHHh
Confidence 4565543
No 3
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=8.3e-37 Score=286.40 Aligned_cols=213 Identities=39% Similarity=0.680 Sum_probs=191.2
Q ss_pred HHHhcCCCCCCCCCCCCCCCCCCCCCCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEECCEEEEE
Q psy11333 261 KNYLLLPQERPLMQGPRTRPRKPSRRGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVLNDLLYAV 340 (482)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~ 340 (482)
.+|..++ .+|.+|..+.++ ..+++||++||......++++++||+.+++|+.++++|.+|..|++++++++||++
T Consensus 87 ~~W~~~~----~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~ 161 (302)
T 2xn4_A 87 DQWTSVA----NMRDRRSTLGAA-VLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAV 161 (302)
T ss_dssp TEEEEEC----CCSSCCBSCEEE-EETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEE
T ss_pred CceeeCC----CCCccccceEEE-EECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEE
Confidence 4676665 366677765544 46899999999887777889999999999999999999999999999999999999
Q ss_pred ecCCCCC--CCCeEEEEeCCCCceeecCCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCC
Q psy11333 341 GGHDGQS--YLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTT 418 (482)
Q Consensus 341 GG~~~~~--~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~ 418 (482)
||.+... ..+++++||+.+++|+.+ +++|.+|..+++++++++||++||.++....+++++||+.+++|+.++++|.
T Consensus 162 GG~~~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~ 240 (302)
T 2xn4_A 162 GGYDVASRQCLSTVECYNATTNEWTYI-AEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNM 240 (302)
T ss_dssp CCEETTTTEECCCEEEEETTTTEEEEE-CCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSS
T ss_pred eCCCCCCCccccEEEEEeCCCCcEEEC-CCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCC
Confidence 9986543 468899999999999999 8999999999999999999999998876667899999999999999999999
Q ss_pred CccceEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCCceeecC-CCCcCCCceeEEEEcCCC
Q psy11333 419 RRLGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLNRWTAMA-PMSTRRKHLGCAVFVGDN 479 (482)
Q Consensus 419 ~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~~W~~~~-~~~~~r~~~~~~~~~~~~ 479 (482)
+|..++++.++++||++||.++....+++++||+++++|+.++ +||.+|.+|++++++++|
T Consensus 241 ~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~i 302 (302)
T 2xn4_A 241 CRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGRSYAGVTVIDKRL 302 (302)
T ss_dssp CCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECSSCCSSCCBSCEEEEEEC--
T ss_pred ccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEECCcccCcccccceEEEecccC
Confidence 9999999999999999999987777889999999999999997 899999999999999886
No 4
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=284.19 Aligned_cols=213 Identities=41% Similarity=0.721 Sum_probs=192.5
Q ss_pred HHHhcCCCCCCCCCCCCCCCCCCCCCCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEECCEEEEE
Q psy11333 261 KNYLLLPQERPLMQGPRTRPRKPSRRGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVLNDLLYAV 340 (482)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~ 340 (482)
..|..++ .+|.+|..+.. +..++.||++||..+....+++++||+.+++|+.++++|.+|.+|++++++++||++
T Consensus 40 ~~W~~~~----~~p~~r~~~~~-~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~ 114 (302)
T 2xn4_A 40 ERWHQVA----ELPSRRCRAGM-VYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAV 114 (302)
T ss_dssp TEEEEEC----CCSSCCBSCEE-EEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEE
T ss_pred CcEeEcc----cCCcccccceE-EEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEE
Confidence 4577665 36667776554 456999999999887777889999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEECCEEEEEeccCCC--cccCeEEEEeCCCCceeecCCCCC
Q psy11333 341 GGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGV--QCLNHVERYDPKENKWSRVAPMTT 418 (482)
Q Consensus 341 GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~--~~~~~~~~yd~~~~~W~~~~~~~~ 418 (482)
||.++....+++++||+.+++|+.+ +++|.+|..+++++++++||++||.++. ...+++++||+.+++|+.++++|.
T Consensus 115 GG~~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~ 193 (302)
T 2xn4_A 115 GGFDGSTGLSSVEAYNIKSNEWFHV-APMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMST 193 (302)
T ss_dssp EEECSSCEEEEEEEEETTTTEEEEE-CCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSS
T ss_pred cCCCCCccCceEEEEeCCCCeEeec-CCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcc
Confidence 9988766678999999999999999 9999999999999999999999997654 347899999999999999999999
Q ss_pred CccceEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCCceeecCCCCcCCCceeEEEEcCCC
Q psy11333 419 RRLGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLNRWTAMAPMSTRRKHLGCAVFVGDN 479 (482)
Q Consensus 419 ~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~~W~~~~~~~~~r~~~~~~~~~~~~ 479 (482)
+|..+++++++++||++||.++....+++++||+++++|+.++++|.+|.+++++++++++
T Consensus 194 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i 254 (302)
T 2xn4_A 194 RRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLL 254 (302)
T ss_dssp CCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEE
T ss_pred ccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEE
Confidence 9999999999999999999987767889999999999999999999999999999888876
No 5
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.6e-36 Score=285.05 Aligned_cols=215 Identities=42% Similarity=0.708 Sum_probs=194.0
Q ss_pred HHHHhcCCCCCCCCCCCCCCCCCCCCCCcEEEEeccc----cCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEECC
Q psy11333 260 AKNYLLLPQERPLMQGPRTRPRKPSRRGEVLFAVGGW----CSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVLND 335 (482)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GG~----~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~ 335 (482)
..+|..++ .+|.+|..+.. +..++.||++||. ......+++++||+.+++|+.++++|.+|..|+++++++
T Consensus 48 ~~~W~~~~----~~p~~r~~~~~-~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~ 122 (308)
T 1zgk_A 48 NGTWLRLA----DLQVPRSGLAG-CVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDG 122 (308)
T ss_dssp TTEEEECC----CCSSCCBSCEE-EEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETT
T ss_pred CCeEeECC----CCCcccccceE-EEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEECC
Confidence 35677765 36677776654 4569999999998 445567899999999999999999999999999999999
Q ss_pred EEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecCC
Q psy11333 336 LLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAP 415 (482)
Q Consensus 336 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 415 (482)
+||++||.+.....+++++||+.+++|+.+ +++|.+|..+++++++++||++||.++....+++++||+.+++|+.+++
T Consensus 123 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 201 (308)
T 1zgk_A 123 HIYAVGGSHGCIHHNSVERYEPERDEWHLV-APMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITA 201 (308)
T ss_dssp EEEEECCEETTEECCCEEEEETTTTEEEEC-CCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCC
T ss_pred EEEEEcCCCCCcccccEEEECCCCCeEeEC-CCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCC
Confidence 999999987766678999999999999999 8999999999999999999999998876668899999999999999999
Q ss_pred CCCCccceEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCCceeecCCCCcCCCceeEEEEcCCCC
Q psy11333 416 MTTRRLGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLNRWTAMAPMSTRRKHLGCAVFVGDNG 480 (482)
Q Consensus 416 ~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~~W~~~~~~~~~r~~~~~~~~~~~~~ 480 (482)
+|.+|..+++++++++||++||.++....+++++||+++++|+.++++|.+|.++++++++++|.
T Consensus 202 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~ 266 (308)
T 1zgk_A 202 MNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIY 266 (308)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEE
T ss_pred CCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEECCEEE
Confidence 99999999999999999999999877778999999999999999999999999999999988763
No 6
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.9e-36 Score=284.55 Aligned_cols=213 Identities=25% Similarity=0.436 Sum_probs=191.9
Q ss_pred HHHhcCCCCCCCCCCCCCCCCCCCCCCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEECCEEEEE
Q psy11333 261 KNYLLLPQERPLMQGPRTRPRKPSRRGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVLNDLLYAV 340 (482)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~ 340 (482)
.+|..++ .+|.+|..+.++ .+++.||++||.. ....+++++||+.+++|..++++|.+|.+|++++++++||++
T Consensus 34 ~~W~~~~----~~p~~r~~~~~~-~~~~~lyv~GG~~-~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~ 107 (306)
T 3ii7_A 34 YSWTDIR----CPFEKRRDAACV-FWDNVVYILGGSQ-LFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTS 107 (306)
T ss_dssp TEEEECC----CCSCCCBSCEEE-EETTEEEEECCBS-SSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEE
T ss_pred CCEecCC----CCCcccceeEEE-EECCEEEEEeCCC-CCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEE
Confidence 4677765 366677765544 5799999999987 677889999999999999999999999999999999999999
Q ss_pred ecCC-CCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEECCEEEEEeccCCCcc----cCeEEEEeCCCCceeecCC
Q psy11333 341 GGHD-GQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQC----LNHVERYDPKENKWSRVAP 415 (482)
Q Consensus 341 GG~~-~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~----~~~~~~yd~~~~~W~~~~~ 415 (482)
||.+ +....+++++||+.+++|+.+ +++|.+|..+++++.+++||++||.++... .+++++||+.+++|+.+++
T Consensus 108 GG~~~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 186 (306)
T 3ii7_A 108 GGSEVGNSALYLFECYDTRTESWHTK-PSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCP 186 (306)
T ss_dssp CCBBTTBSCCCCEEEEETTTTEEEEE-CCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECC
T ss_pred CCCCCCCcEeeeEEEEeCCCCceEeC-CCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCC
Confidence 9987 555678999999999999999 999999999999999999999999765443 7899999999999999999
Q ss_pred CCCCccceEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCCceeecCCCCcCCCceeEEEEcCCCC
Q psy11333 416 MTTRRLGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLNRWTAMAPMSTRRKHLGCAVFVGDNG 480 (482)
Q Consensus 416 ~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~~W~~~~~~~~~r~~~~~~~~~~~~~ 480 (482)
+|.+|..+++++++++||++||.++....+++++||+.+++|+.++++|.+|.+++++++++++.
T Consensus 187 ~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~ 251 (306)
T 3ii7_A 187 MIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVY 251 (306)
T ss_dssp CSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEETTEEE
T ss_pred ccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEECCEEE
Confidence 99999999999999999999998776677899999999999999999999999999999988763
No 7
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=3.3e-36 Score=283.01 Aligned_cols=209 Identities=43% Similarity=0.728 Sum_probs=190.4
Q ss_pred HHHhcCCCCCCCCCCCCCCCCCCCCCCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEECCEEEEE
Q psy11333 261 KNYLLLPQERPLMQGPRTRPRKPSRRGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVLNDLLYAV 340 (482)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~ 340 (482)
.+|..++ .+|.+|..+.++ .++++||++||......++++++||+.+++|+.++++|.+|..|++++++++||++
T Consensus 100 ~~W~~~~----~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~ 174 (308)
T 1zgk_A 100 NQWSPCA----PMSVPRNRIGVG-VIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAV 174 (308)
T ss_dssp TEEEECC----CCSSCCBTCEEE-EETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEE
T ss_pred CeEeECC----CCCcCccccEEE-EECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEE
Confidence 4576665 356677765544 46999999999887677889999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCc
Q psy11333 341 GGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRR 420 (482)
Q Consensus 341 GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r 420 (482)
||.++....+++++||+.+++|+.+ +++|.+|..+++++++++||++||.++....+++++||+.+++|+.++++|.+|
T Consensus 175 GG~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r 253 (308)
T 1zgk_A 175 GGFDGTNRLNSAECYYPERNEWRMI-TAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRR 253 (308)
T ss_dssp CCBCSSCBCCCEEEEETTTTEEEEC-CCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCC
T ss_pred eCCCCCCcCceEEEEeCCCCeEeeC-CCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCc
Confidence 9998766688999999999999999 899999999999999999999999887667899999999999999999999999
Q ss_pred cceEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCCceeecCCCCcCCCceeEEEE
Q psy11333 421 LGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLNRWTAMAPMSTRRKHLGCAVF 475 (482)
Q Consensus 421 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~~W~~~~~~~~~r~~~~~~~~ 475 (482)
..+++++++++||++||.++....+++++||+++++|+.+++||.+|.+++++++
T Consensus 254 ~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~l 308 (308)
T 1zgk_A 254 SALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVGVAVT 308 (308)
T ss_dssp BSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEC
T ss_pred cceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCCCCCcccceeEeC
Confidence 9999999999999999998877789999999999999999999999999999874
No 8
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=6.7e-36 Score=280.10 Aligned_cols=213 Identities=36% Similarity=0.696 Sum_probs=194.0
Q ss_pred HHHhcCCCCCCCCCCCCCCCCCCCCCCcEEEEeccccCCCCCceeEEEeCCCCC---eeeccCCCCCCCceeEEEECCEE
Q psy11333 261 KNYLLLPQERPLMQGPRTRPRKPSRRGEVLFAVGGWCSGDAISSVERYDPQSSD---WKIVAPMSKRRCGVGVAVLNDLL 337 (482)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~d~~~~~---W~~~~~~~~~~~~~~~~~~~~~i 337 (482)
.+|..++ .+|.+|..+.. +..++.||++||..+....+++++||+.+++ |+.++++|.+|..|++++++++|
T Consensus 41 ~~W~~~~----~~p~~r~~~~~-~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~l 115 (301)
T 2vpj_A 41 QEWSFLP----SITRKRRYVAS-VSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMI 115 (301)
T ss_dssp TEEEECC----CCSSCCBSCEE-EEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEE
T ss_pred CeEEeCC----CCChhhccccE-EEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEE
Confidence 4677766 35666665543 4568999999998877788899999999999 99999999999999999999999
Q ss_pred EEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCC
Q psy11333 338 YAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMT 417 (482)
Q Consensus 338 yv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~ 417 (482)
|++||.++....+++++||+.+++|+.+ +++|.+|..+++++.+++||++||.++....+++++||+.+++|+.++++|
T Consensus 116 yv~GG~~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p 194 (301)
T 2vpj_A 116 YVSGGFDGSRRHTSMERYDPNIDQWSML-GDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMA 194 (301)
T ss_dssp EEECCBCSSCBCCEEEEEETTTTEEEEE-EECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCS
T ss_pred EEEcccCCCcccceEEEEcCCCCeEEEC-CCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCC
Confidence 9999998766788999999999999999 899999999999999999999999887667899999999999999999999
Q ss_pred CCccceEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCCceeecCCCCcCCCceeEEEEcCCC
Q psy11333 418 TRRLGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLNRWTAMAPMSTRRKHLGCAVFVGDN 479 (482)
Q Consensus 418 ~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~~W~~~~~~~~~r~~~~~~~~~~~~ 479 (482)
.+|..+++++.+++||++||.++....+++++||+++++|+.++++|.+|.+++++++++++
T Consensus 195 ~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i 256 (301)
T 2vpj_A 195 TKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRL 256 (301)
T ss_dssp SCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEE
T ss_pred cccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEECCEE
Confidence 99999999999999999999987766889999999999999999999999999999998876
No 9
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=4e-36 Score=282.31 Aligned_cols=213 Identities=27% Similarity=0.492 Sum_probs=192.2
Q ss_pred HHHhcCCCCCCCCCCCCCCCCCCCCCCcEEEEecccc-CCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEECCEEEE
Q psy11333 261 KNYLLLPQERPLMQGPRTRPRKPSRRGEVLFAVGGWC-SGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVLNDLLYA 339 (482)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GG~~-~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv 339 (482)
.+|..++ .+|.+|..+.++ .++++||++||.. ....++++++||+.+++|+.++++|.+|..|++++++++||+
T Consensus 80 ~~W~~~~----~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv 154 (306)
T 3ii7_A 80 DSWYSKL----GPPTPRDSLAAC-AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYV 154 (306)
T ss_dssp TEEEEEE----CCSSCCBSCEEE-EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEE
T ss_pred CeEEECC----CCCccccceeEE-EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEE
Confidence 4576665 366677766544 4699999999987 566788999999999999999999999999999999999999
Q ss_pred EecCCCCCC----CCeEEEEeCCCCceeecCCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecCC
Q psy11333 340 VGGHDGQSY----LNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAP 415 (482)
Q Consensus 340 ~GG~~~~~~----~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 415 (482)
+||.+.... .+++++||+.+++|+.+ +++|.+|..+++++++++||++||.++....+++++||+.+++|+.+++
T Consensus 155 ~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 233 (306)
T 3ii7_A 155 CGGSLGNNVSGRVLNSCEVYDPATETWTEL-CPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSP 233 (306)
T ss_dssp ECCEESCTTTCEECCCEEEEETTTTEEEEE-CCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCC
T ss_pred ECCCCCCCCcccccceEEEeCCCCCeEEEC-CCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCC
Confidence 999876554 78999999999999999 8999999999999999999999998776678899999999999999999
Q ss_pred CCCCccceEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCCceeecCCCCcCCCceeEEEEcCCC
Q psy11333 416 MTTRRLGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLNRWTAMAPMSTRRKHLGCAVFVGDN 479 (482)
Q Consensus 416 ~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~~W~~~~~~~~~r~~~~~~~~~~~~ 479 (482)
+|.+|..+++++++++||++||.++....+++++||+++++|+.++++|.+|.+|+++++.+..
T Consensus 234 ~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~~ 297 (306)
T 3ii7_A 234 MPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRAFPVTSCLICVVDTC 297 (306)
T ss_dssp CSCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEECCSCTTCEEEEEECC
T ss_pred CCCCccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcccccceeEEEEECCcc
Confidence 9999999999999999999999988778899999999999999999999999999999887654
No 10
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=7.1e-36 Score=279.92 Aligned_cols=209 Identities=36% Similarity=0.693 Sum_probs=190.1
Q ss_pred HhcCCCCCCCCCCCCCCCCCCCCCCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEECCEEEEEec
Q psy11333 263 YLLLPQERPLMQGPRTRPRKPSRRGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVLNDLLYAVGG 342 (482)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG 342 (482)
|..++ .+|.+|..+.++ ..+++||++||..+...++++++||+.+++|+.++++|.+|..|++++++++||++||
T Consensus 93 W~~~~----~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 167 (301)
T 2vpj_A 93 WYSVA----PMNVRRGLAGAT-TLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGG 167 (301)
T ss_dssp CEEEC----CCSSCCBSCEEE-EETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECC
T ss_pred eEECC----CCCCCccceeEE-EECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECC
Confidence 66654 356677766544 4689999999998777788999999999999999999999999999999999999999
Q ss_pred CCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccc
Q psy11333 343 HDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLG 422 (482)
Q Consensus 343 ~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~ 422 (482)
.++....+++++||+.+++|+.+ +++|.+|..+++++.+++||++||.++....+++++||+.+++|+.++++|.+|..
T Consensus 168 ~~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~ 246 (301)
T 2vpj_A 168 YDGLNILNSVEKYDPHTGHWTNV-TPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCY 246 (301)
T ss_dssp BCSSCBCCCEEEEETTTTEEEEE-CCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS
T ss_pred CCCCcccceEEEEeCCCCcEEeC-CCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccc
Confidence 98777788999999999999999 89999999999999999999999988766688999999999999999999999999
Q ss_pred eEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCCceeecCCCCcCCCceeEEEEcC
Q psy11333 423 VAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLNRWTAMAPMSTRRKHLGCAVFVG 477 (482)
Q Consensus 423 ~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~~W~~~~~~~~~r~~~~~~~~~~ 477 (482)
+++++++++||++||.++....+++++||+++++|+.+++||.+|..|+++++.+
T Consensus 247 ~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~ 301 (301)
T 2vpj_A 247 VGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGTQRCDAGVCVLRE 301 (301)
T ss_dssp CEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEEEEEESCEEEEEEC
T ss_pred eeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCCcccccceEEEeCC
Confidence 9999999999999998877677899999999999999999999999999998753
No 11
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=8.4e-36 Score=281.20 Aligned_cols=205 Identities=24% Similarity=0.459 Sum_probs=182.4
Q ss_pred CCCCCCCCCCCCCCcEEEEecccc------CCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEECCEEEEEecCC---
Q psy11333 274 QGPRTRPRKPSRRGEVLFAVGGWC------SGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVLNDLLYAVGGHD--- 344 (482)
Q Consensus 274 ~~~~~~~~~~~~~~~~l~~~GG~~------~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~--- 344 (482)
|.+|..+. ++..++.||++||.. .....+++++||+.+++|+.++++|.+|.+|++++++++||++||.+
T Consensus 33 p~~r~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~ 111 (315)
T 4asc_A 33 QVPKNHVS-LVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKD 111 (315)
T ss_dssp CSCSSEEE-EECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESST
T ss_pred CCCccceE-EEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCC
Confidence 34565554 445799999999963 12234569999999999999999999999999999999999999974
Q ss_pred CCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEECCEEEEEecc-CCCcccCeEEEEeCCCCceeecCCCCCCccce
Q psy11333 345 GQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQ-DGVQCLNHVERYDPKENKWSRVAPMTTRRLGV 423 (482)
Q Consensus 345 ~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~-~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~ 423 (482)
+....+++++||+.+++|+.+ +++|.+|..+++++.+++||++||. .+....+++++||+.+++|+.++++|.+|..|
T Consensus 112 ~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~ 190 (315)
T 4asc_A 112 GERCLDSVMCYDRLSFKWGES-DPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLF 190 (315)
T ss_dssp TCCBCCCEEEEETTTTEEEEC-CCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSC
T ss_pred CCcccceEEEECCCCCcEeEC-CCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhce
Confidence 345678999999999999999 8999999999999999999999998 45567889999999999999999999999999
Q ss_pred EEEEECCEEEEEcCCCCCCCCCeEEEEeCCCCceeecCCCCcCCCceeEEEEcCCCC
Q psy11333 424 AVAVLGGFLYAIGGSDGQSPLNTVERFDPKLNRWTAMAPMSTRRKHLGCAVFVGDNG 480 (482)
Q Consensus 424 ~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~~W~~~~~~~~~r~~~~~~~~~~~~~ 480 (482)
++++++++||++||.++....+++++||+++++|+.++++|.+|.+|+++++++++.
T Consensus 191 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~ 247 (315)
T 4asc_A 191 GATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSLVGTLY 247 (315)
T ss_dssp EEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEE
T ss_pred EEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEECCEEE
Confidence 999999999999999877677899999999999999999999999999999998763
No 12
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=5.2e-36 Score=282.65 Aligned_cols=212 Identities=25% Similarity=0.435 Sum_probs=187.5
Q ss_pred HHHhcCCCCCCCCCCCCCCCCCCCCCCcEEEEecccc---CCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEECCEE
Q psy11333 261 KNYLLLPQERPLMQGPRTRPRKPSRRGEVLFAVGGWC---SGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVLNDLL 337 (482)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GG~~---~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~i 337 (482)
.+|..++ .+|.+|..+.. +.++++||++||.. +....+++++||+.+++|+.++++|.+|.+|++++++++|
T Consensus 77 ~~W~~~~----~~p~~r~~~~~-~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i 151 (315)
T 4asc_A 77 SEWLGMP----PLPSPRCLFGL-GEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLV 151 (315)
T ss_dssp TEEEECC----CBSSCEESCEE-EEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEE
T ss_pred CeEEECC----CCCcchhceeE-EEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEE
Confidence 4576665 36667776554 45699999999975 3567889999999999999999999999999999999999
Q ss_pred EEEecC-CCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCC
Q psy11333 338 YAVGGH-DGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPM 416 (482)
Q Consensus 338 yv~GG~-~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~ 416 (482)
|++||. +.....+++++||+.+++|+.+ +++|.+|..+++++++++||++||.++....+++++||+.+++|+.++++
T Consensus 152 yv~GG~~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~ 230 (315)
T 4asc_A 152 YVIGGKGSDRKCLNKMCVYDPKKFEWKEL-APMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAF 230 (315)
T ss_dssp EEECCBCTTSCBCCCEEEEETTTTEEEEC-CCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCC
T ss_pred EEEeCCCCCCcccceEEEEeCCCCeEEEC-CCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCC
Confidence 999998 4455678999999999999999 89999999999999999999999988776788999999999999999999
Q ss_pred CCCccceEEEEECCEEEEEcCCCCC---------CCCCeEEEEeCCCCceeecCCCCcCCCceeEEEEcCCCC
Q psy11333 417 TTRRLGVAVAVLGGFLYAIGGSDGQ---------SPLNTVERFDPKLNRWTAMAPMSTRRKHLGCAVFVGDNG 480 (482)
Q Consensus 417 ~~~r~~~~~~~~~~~i~v~GG~~~~---------~~~~~~~~y~~~~~~W~~~~~~~~~r~~~~~~~~~~~~~ 480 (482)
|.+|..+++++++++||++||.++. ...+++++||+++++|+.+ +|.+|..++++++++++.
T Consensus 231 p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~~~~~~~~~~~l~ 301 (315)
T 4asc_A 231 PQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV--LREIAYAAGATFLPVRLN 301 (315)
T ss_dssp SSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE--ESCSSCCSSCEEEEEEEC
T ss_pred CCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh--ccCCcCccceEEeCCEEE
Confidence 9999999999999999999997431 2457899999999999999 677899999999998864
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=2e-35 Score=279.05 Aligned_cols=212 Identities=25% Similarity=0.448 Sum_probs=187.1
Q ss_pred HHHhcCCCCCCCCCCCCCCCCCCCCCCcEEEEecccc--CCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEECCEEE
Q psy11333 261 KNYLLLPQERPLMQGPRTRPRKPSRRGEVLFAVGGWC--SGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVLNDLLY 338 (482)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GG~~--~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~iy 338 (482)
.+|..++ .+|.+|..+.. +..+++||++||.. ....++++++||+.+++|+.++++|.+|.+|++++++++||
T Consensus 88 ~~W~~~~----~~p~~r~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy 162 (318)
T 2woz_A 88 SEWVGLP----PLPSARCLFGL-GEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIY 162 (318)
T ss_dssp TEEEECS----CBSSCBCSCEE-EEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEE
T ss_pred CcEEECC----CCCccccccce-EEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEE
Confidence 4576665 35667766554 44689999999986 45677899999999999999999999999999999999999
Q ss_pred EEecCCC-CCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCC
Q psy11333 339 AVGGHDG-QSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMT 417 (482)
Q Consensus 339 v~GG~~~-~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~ 417 (482)
++||.+. ....+++++||+.+++|+.+ +++|.+|..+++++++++||++||.++....+++++||+.+++|+.++++|
T Consensus 163 v~GG~~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p 241 (318)
T 2woz_A 163 CLGGKTDDKKCTNRVFIYNPKKGDWKDL-APMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFP 241 (318)
T ss_dssp EECCEESSSCBCCCEEEEETTTTEEEEE-CCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCS
T ss_pred EEcCCCCCCCccceEEEEcCCCCEEEEC-CCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCC
Confidence 9999743 34578899999999999999 899999999999999999999999877667789999999999999999999
Q ss_pred CCccceEEEEECCEEEEEcCCCCC---------CCCCeEEEEeCCCCceeecCCCCcCCCceeEEEEcCCCC
Q psy11333 418 TRRLGVAVAVLGGFLYAIGGSDGQ---------SPLNTVERFDPKLNRWTAMAPMSTRRKHLGCAVFVGDNG 480 (482)
Q Consensus 418 ~~r~~~~~~~~~~~i~v~GG~~~~---------~~~~~~~~y~~~~~~W~~~~~~~~~r~~~~~~~~~~~~~ 480 (482)
.+|..+++++++++||++||.+.. ...+++++||+++++|+.+ +|.+|.+|++++++++|.
T Consensus 242 ~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~~~~~~~~~~~iy 311 (318)
T 2woz_A 242 QERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--LKEIRYASGASCLATRLN 311 (318)
T ss_dssp SCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--ESCCGGGTTCEEEEEEEE
T ss_pred CcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--cccccccccceeeCCEEE
Confidence 999999999999999999998642 3468899999999999999 889999999999998874
No 14
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=8.2e-35 Score=274.79 Aligned_cols=203 Identities=29% Similarity=0.505 Sum_probs=179.0
Q ss_pred CCCCCCCCCCCCCcEEEEecccc--C----CCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEECCEEEEEecCC--CC
Q psy11333 275 GPRTRPRKPSRRGEVLFAVGGWC--S----GDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVLNDLLYAVGGHD--GQ 346 (482)
Q Consensus 275 ~~~~~~~~~~~~~~~l~~~GG~~--~----~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~--~~ 346 (482)
.+|..+. ++..++.||++||.. . ....+.+++||+.+++|..++++|.+|.+|++++++++||++||.+ +.
T Consensus 45 ~~r~~~~-~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 123 (318)
T 2woz_A 45 IPRNHSS-IVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTE 123 (318)
T ss_dssp SCSSEEE-EECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTC
T ss_pred CCccceE-EEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCC
Confidence 4555443 455799999999953 1 1223459999999999999999999999999999999999999986 34
Q ss_pred CCCCeEEEEeCCCCceeecCCCCCCcccceeEEEECCEEEEEeccC-CCcccCeEEEEeCCCCceeecCCCCCCccceEE
Q psy11333 347 SYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQD-GVQCLNHVERYDPKENKWSRVAPMTTRRLGVAV 425 (482)
Q Consensus 347 ~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~ 425 (482)
...+++++||+.+++|+.+ +++|.+|..+++++.+++||++||.+ +....+++++||+.+++|+.++++|.+|..|++
T Consensus 124 ~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 202 (318)
T 2woz_A 124 ASLDSVLCYDPVAAKWSEV-KNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGV 202 (318)
T ss_dssp CEEEEEEEEETTTTEEEEE-CCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEE
T ss_pred cccceEEEEeCCCCCEeEC-CCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceE
Confidence 4568899999999999999 89999999999999999999999974 344678999999999999999999999999999
Q ss_pred EEECCEEEEEcCCCCCCCCCeEEEEeCCCCceeecCCCCcCCCceeEEEEcCCC
Q psy11333 426 AVLGGFLYAIGGSDGQSPLNTVERFDPKLNRWTAMAPMSTRRKHLGCAVFVGDN 479 (482)
Q Consensus 426 ~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~~W~~~~~~~~~r~~~~~~~~~~~~ 479 (482)
++++++||++||.++....+++++||+++++|+.++++|.+|.+|+++++++++
T Consensus 203 ~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i 256 (318)
T 2woz_A 203 AIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSLAGSL 256 (318)
T ss_dssp EEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEETTEE
T ss_pred EEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEECCEE
Confidence 999999999999877666788999999999999999999999999999998876
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=2.3e-33 Score=290.40 Aligned_cols=261 Identities=13% Similarity=0.097 Sum_probs=200.4
Q ss_pred HHhcChhHHHHHHHHhhccccCCCCChhhHhhcccCcccccCCh---hhHHHH------HHHHHHhcCCCCCCCCCCCCC
Q psy11333 208 WLKYNVSERRQHLAQVLQHVRLPLLSPKFLVGTVGSDLLVRSDE---ACRDLV------DEAKNYLLLPQERPLMQGPRT 278 (482)
Q Consensus 208 wi~~~~~~~~~~~~~l~~~~r~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 278 (482)
|+..+...|...+..+.+.++++.+.+.+++........+.... .|.+.. .+..+|...+ ..|..|.
T Consensus 315 ~~~~~e~~R~~~lE~ldE~e~~~l~~~hY~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~p~rr~ 390 (695)
T 2zwa_A 315 SADEATKKELLKVEPFDELEEFHLFCHHYVLCHATNYKEFAFTQGFLFDRSISEINLTVDEDYQLLECE----CPINRKF 390 (695)
T ss_dssp HSCHHHHHHHHHHSCCCCHHHHHHHHHTEEEEEEESCTTCCCCTTTCCCC----CCCEECSSEEEEECC----CTTCCBS
T ss_pred hCCHHHHHHHHhccccchHHHHHHhhccEEEEEEecCCccccCcccCCCCccccccCCCCCceeEeccC----CCCCCce
Confidence 66555555555666666666666666666555444333322222 222211 0011122111 1223333
Q ss_pred CCCCCCCCCcEEEEeccccCCCCCceeEEEeCCCCCeeecc-C-----CCCCCCceeEEEE--CCEEEEEecCCCCC-CC
Q psy11333 279 RPRKPSRRGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVA-P-----MSKRRCGVGVAVL--NDLLYAVGGHDGQS-YL 349 (482)
Q Consensus 279 ~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~-~-----~~~~~~~~~~~~~--~~~iyv~GG~~~~~-~~ 349 (482)
. .+++.++.||++||... ...+++++||+.+++|..++ + +|.+|.+|+++++ +++|||+||.+... ..
T Consensus 391 g--~~~~~~~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~ 467 (695)
T 2zwa_A 391 G--DVDVAGNDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGL 467 (695)
T ss_dssp C--EEEECSSCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBC
T ss_pred e--EEEEECCEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCcc
Confidence 2 23337899999999876 77889999999999999887 5 7899999999999 99999999987644 67
Q ss_pred CeEEEEeCCCCceeecCCCCCCcccceeEEEE-CCEEEEEeccCCCcccCeEEEEeCCCCceeecCC---CCCCccceEE
Q psy11333 350 NSIERYDPQTNQWSCDVAPTTSCRTSVGVAVL-DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAP---MTTRRLGVAV 425 (482)
Q Consensus 350 ~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~---~~~~r~~~~~ 425 (482)
+++++||+.+++|+.+ +++|.+|..|+++++ +++||++||.++.. ++++||+.+++|+.+++ +|.+|.+|++
T Consensus 468 ~dv~~yd~~t~~W~~~-~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a 543 (695)
T 2zwa_A 468 SDNWIFDMKTREWSMI-KSLSHTRFRHSACSLPDGNVLILGGVTEGP---AMLLYNVTEEIFKDVTPKDEFFQNSLVSAG 543 (695)
T ss_dssp CCCEEEETTTTEEEEC-CCCSBCCBSCEEEECTTSCEEEECCBCSSC---SEEEEETTTTEEEECCCSSGGGGSCCBSCE
T ss_pred ccEEEEeCCCCcEEEC-CCCCCCcccceEEEEcCCEEEEECCCCCCC---CEEEEECCCCceEEccCCCCCCCcccceeE
Confidence 8999999999999999 999999999999996 99999999987654 89999999999999986 8999999998
Q ss_pred EEEC---CEEEEEcCCCC--CCCCCeEEEEeCCCCc------eeecCCC-CcCCCceeEEEEc-CCC
Q psy11333 426 AVLG---GFLYAIGGSDG--QSPLNTVERFDPKLNR------WTAMAPM-STRRKHLGCAVFV-GDN 479 (482)
Q Consensus 426 ~~~~---~~i~v~GG~~~--~~~~~~~~~y~~~~~~------W~~~~~~-~~~r~~~~~~~~~-~~~ 479 (482)
++++ ++||++||.+. ....+++++||+.+++ |+.++++ +.+|.+|++++++ ++|
T Consensus 544 ~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~i 610 (695)
T 2zwa_A 544 LEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKL 610 (695)
T ss_dssp EEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEE
T ss_pred EEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEE
Confidence 8876 89999999843 3567899999999999 8999886 5899999999998 765
No 16
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=2.6e-32 Score=262.03 Aligned_cols=213 Identities=19% Similarity=0.283 Sum_probs=171.7
Q ss_pred HHHhcCCCCCCCCC-CCCCCCCCCCCCCcEEEEeccc-c----CCCCCceeEEEeCCCCCeeeccCCC-CCCCceeEEEE
Q psy11333 261 KNYLLLPQERPLMQ-GPRTRPRKPSRRGEVLFAVGGW-C----SGDAISSVERYDPQSSDWKIVAPMS-KRRCGVGVAVL 333 (482)
Q Consensus 261 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~GG~-~----~~~~~~~~~~~d~~~~~W~~~~~~~-~~~~~~~~~~~ 333 (482)
.+|..++. +| .+|..+.+ +.++++||++||. . ....++++++||+.+++|+.+++++ .+|.+|+++++
T Consensus 43 ~~W~~~~~----~p~~~R~~~~~-~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~ 117 (357)
T 2uvk_A 43 KKWTALAA----FPGGPRDQATS-AFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVH 117 (357)
T ss_dssp CCEEECCC----CTTCCCBSCEE-EEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEE
T ss_pred CCeeECCC----CCCCcCccceE-EEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEE
Confidence 45666653 55 56666554 4568999999998 2 2346789999999999999999988 99999999999
Q ss_pred CCEEEEEecCCCC----------------------------------CCCCeEEEEeCCCCceeecCCCCCCcccc-eeE
Q psy11333 334 NDLLYAVGGHDGQ----------------------------------SYLNSIERYDPQTNQWSCDVAPTTSCRTS-VGV 378 (482)
Q Consensus 334 ~~~iyv~GG~~~~----------------------------------~~~~~~~~yd~~~~~W~~~~~~~~~~r~~-~~~ 378 (482)
+++||++||.+.. ...+++++||+.+++|+.+ +++|.+|.. +++
T Consensus 118 ~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~~~~~~~~ 196 (357)
T 2uvk_A 118 NGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYA-GESPWYGTAGAAV 196 (357)
T ss_dssp TTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEE-EECSSCCCBSCEE
T ss_pred CCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEEC-CCCCCCCcccccE
Confidence 9999999998643 2457999999999999999 888876654 899
Q ss_pred EEECCEEEEEeccCCC-cccCeEEEEeC--CCCceeecCCCCCCc--cceEEEEECCEEEEEcCCCC-------------
Q psy11333 379 AVLDGFLYAVGGQDGV-QCLNHVERYDP--KENKWSRVAPMTTRR--LGVAVAVLGGFLYAIGGSDG------------- 440 (482)
Q Consensus 379 ~~~~~~lyv~GG~~~~-~~~~~~~~yd~--~~~~W~~~~~~~~~r--~~~~~~~~~~~i~v~GG~~~------------- 440 (482)
++.+++||++||.++. ...+.+++||+ .+++|+.++++|.|| ..+++++.+++||++||.+.
T Consensus 197 ~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~ 276 (357)
T 2uvk_A 197 VNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNY 276 (357)
T ss_dssp EEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSS
T ss_pred EEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCccccccccee
Confidence 9999999999997532 35678999976 999999999887664 57779999999999999632
Q ss_pred ----CCCCCeEEEEeCCCCceeecCCCCcCCCceeEEEEcCCC
Q psy11333 441 ----QSPLNTVERFDPKLNRWTAMAPMSTRRKHLGCAVFVGDN 479 (482)
Q Consensus 441 ----~~~~~~~~~y~~~~~~W~~~~~~~~~r~~~~~~~~~~~~ 479 (482)
...+.++++||+++++|+.++++|.+|.+|+++++++++
T Consensus 277 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i 319 (357)
T 2uvk_A 277 AHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSL 319 (357)
T ss_dssp TTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETTEE
T ss_pred ccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCCEE
Confidence 123457899999999999999999999999999998876
No 17
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.98 E-value=1.4e-31 Score=257.08 Aligned_cols=203 Identities=19% Similarity=0.248 Sum_probs=168.3
Q ss_pred CCCCCCCCCCCCCCCCcEEEEeccccCCCCCceeEEEeCC--CCCeeeccCCC-CCCCceeEEEECCEEEEEecC-C---
Q psy11333 272 LMQGPRTRPRKPSRRGEVLFAVGGWCSGDAISSVERYDPQ--SSDWKIVAPMS-KRRCGVGVAVLNDLLYAVGGH-D--- 344 (482)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~l~~~GG~~~~~~~~~~~~~d~~--~~~W~~~~~~~-~~~~~~~~~~~~~~iyv~GG~-~--- 344 (482)
.+|.+|..+. ++.++++||++||... +++++||+. +++|..++++| .+|.+|++++++++|||+||. +
T Consensus 5 ~lP~~r~~~~-~~~~~~~iyv~GG~~~----~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~ 79 (357)
T 2uvk_A 5 ETPVPFKSGT-GAIDNDTVYIGLGSAG----TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSE 79 (357)
T ss_dssp CCSSCCCSCE-EEEETTEEEEECGGGT----TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTT
T ss_pred CCCccccceE-EEEECCEEEEEeCcCC----CeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCC
Confidence 3666776533 4456999999999753 479999998 49999999999 899999999999999999998 3
Q ss_pred -CCCCCCeEEEEeCCCCceeecCCCCC-CcccceeEEEECCEEEEEeccCCCc---------------------------
Q psy11333 345 -GQSYLNSIERYDPQTNQWSCDVAPTT-SCRTSVGVAVLDGFLYAVGGQDGVQ--------------------------- 395 (482)
Q Consensus 345 -~~~~~~~~~~yd~~~~~W~~~~~~~~-~~r~~~~~~~~~~~lyv~GG~~~~~--------------------------- 395 (482)
.....+++++||+.+++|+.+ ++++ .+|..+++++.+++||++||.++..
T Consensus 80 ~~~~~~~~v~~yd~~~~~W~~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (357)
T 2uvk_A 80 GLTQVFNDVHKYNPKTNSWVKL-MSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFD 158 (357)
T ss_dssp SCEEECCCEEEEETTTTEEEEC-SCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred ccceeeccEEEEeCCCCcEEEC-CCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcc
Confidence 123578899999999999999 7777 9999999999999999999976432
Q ss_pred -------ccCeEEEEeCCCCceeecCCCCCCccc-eEEEEECCEEEEEcCCCCC-CCCCeEEEEeC--CCCceeecCCCC
Q psy11333 396 -------CLNHVERYDPKENKWSRVAPMTTRRLG-VAVAVLGGFLYAIGGSDGQ-SPLNTVERFDP--KLNRWTAMAPMS 464 (482)
Q Consensus 396 -------~~~~~~~yd~~~~~W~~~~~~~~~r~~-~~~~~~~~~i~v~GG~~~~-~~~~~~~~y~~--~~~~W~~~~~~~ 464 (482)
..+++++||+.+++|+.++++|.+|.. +++++.+++||++||.++. ...+++++||+ .+++|+.++++|
T Consensus 159 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~ 238 (357)
T 2uvk_A 159 KKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVS 238 (357)
T ss_dssp SCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSS
T ss_pred ccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCC
Confidence 357999999999999999999987655 9999999999999997543 24678999976 899999999987
Q ss_pred cCC--CceeEEEEcCCCC
Q psy11333 465 TRR--KHLGCAVFVGDNG 480 (482)
Q Consensus 465 ~~r--~~~~~~~~~~~~~ 480 (482)
.+| .+|++++++++|.
T Consensus 239 ~~~~~~~~~~~~~~~~iy 256 (357)
T 2uvk_A 239 SPDGVAGGFAGISNDSLI 256 (357)
T ss_dssp TTTCCBSCEEEEETTEEE
T ss_pred CCcccccceEEEECCEEE
Confidence 764 4777888888763
No 18
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.96 E-value=7.1e-29 Score=256.78 Aligned_cols=200 Identities=14% Similarity=0.175 Sum_probs=167.4
Q ss_pred CCCCCCCCCCCCCC-CcEEEEeccccCC-CCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCC
Q psy11333 273 MQGPRTRPRKPSRR-GEVLFAVGGWCSG-DAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYL 349 (482)
Q Consensus 273 ~~~~~~~~~~~~~~-~~~l~~~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~ 349 (482)
.|.+|..+.+++.. +++||++||.... ..++++|+||+.+++|+.++++|.+|.+|+++++ +++|||+||.+...
T Consensus 436 ~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~-- 513 (695)
T 2zwa_A 436 VPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP-- 513 (695)
T ss_dssp CCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC--
T ss_pred CCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC--
Confidence 56677776654432 8999999998754 3788999999999999999999999999999997 99999999987654
Q ss_pred CeEEEEeCCCCceeecCCC---CCCcccceeEEEEC---CEEEEEeccCC--CcccCeEEEEeCCCCc------eeecCC
Q psy11333 350 NSIERYDPQTNQWSCDVAP---TTSCRTSVGVAVLD---GFLYAVGGQDG--VQCLNHVERYDPKENK------WSRVAP 415 (482)
Q Consensus 350 ~~~~~yd~~~~~W~~~~~~---~~~~r~~~~~~~~~---~~lyv~GG~~~--~~~~~~~~~yd~~~~~------W~~~~~ 415 (482)
++++||+.+++|+.+ ++ +|.+|..+++++++ ++||++||.+. ....+++++||+.+++ |+.+++
T Consensus 514 -~v~~yd~~t~~W~~~-~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~ 591 (695)
T 2zwa_A 514 -AMLLYNVTEEIFKDV-TPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ 591 (695)
T ss_dssp -SEEEEETTTTEEEEC-CCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE
T ss_pred -CEEEEECCCCceEEc-cCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCC
Confidence 899999999999999 54 88999999988877 89999999853 2567899999999999 899887
Q ss_pred C-CCCccceEEEEEC-CEEEEEcCCCCCC---CCCeEEEEeCCCCceeecCCCCc--------CCCceeEEEEcC
Q psy11333 416 M-TTRRLGVAVAVLG-GFLYAIGGSDGQS---PLNTVERFDPKLNRWTAMAPMST--------RRKHLGCAVFVG 477 (482)
Q Consensus 416 ~-~~~r~~~~~~~~~-~~i~v~GG~~~~~---~~~~~~~y~~~~~~W~~~~~~~~--------~r~~~~~~~~~~ 477 (482)
+ +.+|.+|++++++ ++||++||.++.. ..+++++||+.+++|+.+ ++|. .+.+|+++++++
T Consensus 592 ~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~-~~p~~~~~~~~p~~~gh~~~~~~~ 665 (695)
T 2zwa_A 592 HPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSI-PISRRIWEDHSLMLAGFSLVSTSM 665 (695)
T ss_dssp CGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEEC-CCCHHHHHHSCCCCSSCEEECC--
T ss_pred CCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEe-eccccccCCCCccceeeeEEEeCC
Confidence 6 5999999999999 9999999986543 578999999999999965 3322 355677776665
No 19
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.95 E-value=3.7e-27 Score=243.90 Aligned_cols=202 Identities=18% Similarity=0.254 Sum_probs=161.9
Q ss_pred CCCCCCCC--CCCCCCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEec-CCCCCCC
Q psy11333 274 QGPRTRPR--KPSRRGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGG-HDGQSYL 349 (482)
Q Consensus 274 ~~~~~~~~--~~~~~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG-~~~~~~~ 349 (482)
+.+|..+. .++..+++||++||.... ++++||+.+++|..+++|+.+|.+|+++++ +++||++|| .++....
T Consensus 238 ~~~~~~~~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~ 313 (656)
T 1k3i_A 238 VTKHDMFCPGISMDGNGQIVVTGGNDAK----KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFE 313 (656)
T ss_dssp ECSCCCSSCEEEECTTSCEEEECSSSTT----CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCC
T ss_pred CCCCCCccccccCCCCCCEEEeCCCCCC----ceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCccc
Confidence 34444433 233468999999997532 799999999999999999999999999999 999999999 4555567
Q ss_pred CeEEEEeCCCCceeecC----CCCCCcc----------------------------------------------------
Q psy11333 350 NSIERYDPQTNQWSCDV----APTTSCR---------------------------------------------------- 373 (482)
Q Consensus 350 ~~~~~yd~~~~~W~~~~----~~~~~~r---------------------------------------------------- 373 (482)
+++++||+.+++|+.++ .+++.+|
T Consensus 314 ~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~ 393 (656)
T 1k3i_A 314 KNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRG 393 (656)
T ss_dssp CCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTE
T ss_pred ccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccc
Confidence 89999999999999861 2233221
Q ss_pred -----cceeEEE---ECCEEEEEeccCC---CcccC---eEEEEeCCCCceeecC--CCCCCccceEEEEE-CCEEEEEc
Q psy11333 374 -----TSVGVAV---LDGFLYAVGGQDG---VQCLN---HVERYDPKENKWSRVA--PMTTRRLGVAVAVL-GGFLYAIG 436 (482)
Q Consensus 374 -----~~~~~~~---~~~~lyv~GG~~~---~~~~~---~~~~yd~~~~~W~~~~--~~~~~r~~~~~~~~-~~~i~v~G 436 (482)
..++++. .+++||++||... ....+ .+++||+.+++|..+. +||.+|..++++++ +|+||++|
T Consensus 394 ~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~G 473 (656)
T 1k3i_A 394 VAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITG 473 (656)
T ss_dssp ECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEEC
T ss_pred cCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEEC
Confidence 1122332 4899999999642 22334 7899999999999987 99999999999888 99999999
Q ss_pred CCCC------CCCCCeEEEEeCCCCceeecCCCCcCCCceeEEEE--cCCC
Q psy11333 437 GSDG------QSPLNTVERFDPKLNRWTAMAPMSTRRKHLGCAVF--VGDN 479 (482)
Q Consensus 437 G~~~------~~~~~~~~~y~~~~~~W~~~~~~~~~r~~~~~~~~--~~~~ 479 (482)
|.+. .....++++|||.+++|+.++++|.+|.+|+++++ +|++
T Consensus 474 G~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v 524 (656)
T 1k3i_A 474 GQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRV 524 (656)
T ss_dssp CBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCE
T ss_pred CcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEE
Confidence 9642 34578899999999999999999999999998888 6664
No 20
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.95 E-value=1.6e-27 Score=203.18 Aligned_cols=156 Identities=28% Similarity=0.389 Sum_probs=144.1
Q ss_pred CcHHHHHHHHHHHHhcCCceeEEEEeCCeEEeceeEEeeccCHHHHHHhcCCCCcCccceEEEccCCHHHHHHHHHHhhc
Q psy11333 19 KHPRVVLSEVSALRRHRELCDVVLNVGARKIFAHRVVLSACSPYFRAMFTGELAESRQAEVTIRDIDDVAMDNLIEFCYT 98 (482)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~Dv~i~~~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~~~~~l~~~y~ 98 (482)
.++..+...++++++++.+|||+|+++|++|+|||.+|+++|+||++||++++.++....|.++++++..|..+++|+|+
T Consensus 16 ~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~l~~~Yt 95 (172)
T 3htm_A 16 VPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYT 95 (172)
T ss_dssp CCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHHHHHHHHHhC
Confidence 34456899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeeeccccHhhHHHHhcccChhhHHHHHHHHHhccCCCCCHHHHHHHHhhCCCHHHHHHHHHHHHHhHHHHhccc
Q psy11333 99 SHITVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDPSNCLGIRAFADTHSCRDLLRIADKFTQHNFQEVMESE 174 (482)
Q Consensus 99 ~~~~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~i~~~~~~l~~~~ 174 (482)
+.+.++.+++.+++.+|++|++++|++.|.+++.+.++.+|++.++.+|..++++.|.+.|.+||..||.++++++
T Consensus 96 ~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~~v~~s~ 171 (172)
T 3htm_A 96 GKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHATDVLETS 171 (172)
T ss_dssp SCCTTGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-------
T ss_pred CCCCCcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999987764
No 21
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.93 E-value=1.6e-25 Score=231.63 Aligned_cols=200 Identities=18% Similarity=0.279 Sum_probs=157.3
Q ss_pred CCCCCCCCCCCC-CcEEEEeccccCC------CCCceeEEEeCCCCCeeeccCCCCCCCcee--EEE-ECCEEEEEecCC
Q psy11333 275 GPRTRPRKPSRR-GEVLFAVGGWCSG------DAISSVERYDPQSSDWKIVAPMSKRRCGVG--VAV-LNDLLYAVGGHD 344 (482)
Q Consensus 275 ~~~~~~~~~~~~-~~~l~~~GG~~~~------~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~--~~~-~~~~iyv~GG~~ 344 (482)
.|+..+..++.. +++||++||.... .....+++||+.+++|..++.+|.+|..++ +++ .+++||++||.+
T Consensus 184 ~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~ 263 (656)
T 1k3i_A 184 LPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGND 263 (656)
T ss_dssp CSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSS
T ss_pred CCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCC
Confidence 344444444444 8999999997532 133579999999999999998888887664 343 589999999976
Q ss_pred CCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEE-CCEEEEEec-cCCCcccCeEEEEeCCCCceeecC-----CCC
Q psy11333 345 GQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVL-DGFLYAVGG-QDGVQCLNHVERYDPKENKWSRVA-----PMT 417 (482)
Q Consensus 345 ~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~-~~~lyv~GG-~~~~~~~~~~~~yd~~~~~W~~~~-----~~~ 417 (482)
. .++++||+.+++|+.+ ++|+.+|..++++++ +|+||++|| .++....+++++||+.+++|+.++ +|+
T Consensus 264 ~----~~v~~yd~~t~~W~~~-~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~ 338 (656)
T 1k3i_A 264 A----KKTSLYDSSSDSWIPG-PDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPML 338 (656)
T ss_dssp T----TCEEEEEGGGTEEEEC-CCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGC
T ss_pred C----CceEEecCcCCceeEC-CCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccc
Confidence 4 2799999999999999 899999999999998 999999999 455556789999999999999973 343
Q ss_pred CCc---------------------------------------------------------cceEEEE---ECCEEEEEcC
Q psy11333 418 TRR---------------------------------------------------------LGVAVAV---LGGFLYAIGG 437 (482)
Q Consensus 418 ~~r---------------------------------------------------------~~~~~~~---~~~~i~v~GG 437 (482)
.+| ..++++. .+++||++||
T Consensus 339 ~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG 418 (656)
T 1k3i_A 339 TADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGG 418 (656)
T ss_dssp CCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECC
T ss_pred cccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeC
Confidence 331 1233332 4899999999
Q ss_pred CCC---CCCCC---eEEEEeCCCCceeecC--CCCcCCCceeEEEE-cCCC
Q psy11333 438 SDG---QSPLN---TVERFDPKLNRWTAMA--PMSTRRKHLGCAVF-VGDN 479 (482)
Q Consensus 438 ~~~---~~~~~---~~~~y~~~~~~W~~~~--~~~~~r~~~~~~~~-~~~~ 479 (482)
.++ ....+ .+++||+.+++|+.+. +||.+|..|+++++ +|++
T Consensus 419 ~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i 469 (656)
T 1k3i_A 419 SPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGST 469 (656)
T ss_dssp BSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCE
T ss_pred CCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCE
Confidence 643 23344 7899999999999986 99999999998888 7665
No 22
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.91 E-value=1.2e-24 Score=203.63 Aligned_cols=153 Identities=28% Similarity=0.404 Sum_probs=136.9
Q ss_pred HHHHHHHHHHHhcCCceeEEEEeCCeEEeceeEEeeccCHHHHHHhcCCCCcCccceEEEccCCHHHHHHHHHHhhcCee
Q psy11333 22 RVVLSEVSALRRHRELCDVVLNVGARKIFAHRVVLSACSPYFRAMFTGELAESRQAEVTIRDIDDVAMDNLIEFCYTSHI 101 (482)
Q Consensus 22 ~~~~~~~~~~~~~~~~~Dv~i~~~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~~~~~l~~~y~~~~ 101 (482)
..+.+++.++++++.++||+|.++|++|+|||.+|+++|+||++||.+++.|+....|.|+++++..|..+|+|+|++.+
T Consensus 159 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~ 238 (312)
T 3hqi_A 159 CRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKA 238 (312)
T ss_dssp CCHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHHHHHHSCC
T ss_pred chHHHHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHHhhcCCCC
Confidence 35889999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eeccccHhhHHHHhcccChhhHHHHHHHHHhccCCCCCHHHHHHHHhhCCCHHHHHHHHHHHHHhHHHHhccc
Q psy11333 102 TVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDPSNCLGIRAFADTHSCRDLLRIADKFTQHNFQEVMESE 174 (482)
Q Consensus 102 ~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~i~~~~~~l~~~~ 174 (482)
.++.+++.+++.+|++|+++.|+..|++++.+.++..|++.++.+|..+++..|.+.|++||..||.++++++
T Consensus 239 ~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~v~~s~ 311 (312)
T 3hqi_A 239 PNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHATDVLETS 311 (312)
T ss_dssp TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-------
T ss_pred CChHHHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 8888999999999999999999999999999999999999999999999999999999999999999887654
No 23
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.91 E-value=2.1e-24 Score=175.79 Aligned_cols=130 Identities=29% Similarity=0.511 Sum_probs=121.2
Q ss_pred CCCCceeeecCCcHHHHHHHHHHHHhcCCceeEEEEeCCeEEeceeEEeeccCHHHHHHhcCCCCcCccceEEEc-cCCH
Q psy11333 8 ASPACLTHTSDKHPRVVLSEVSALRRHRELCDVVLNVGARKIFAHRVVLSACSPYFRAMFTGELAESRQAEVTIR-DIDD 86 (482)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~i~~~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~~i~l~-~~~~ 86 (482)
.+.....+....|+..+++.++++++++.+|||+|+++|++|+|||.||+++|+||++||++++.+. ..+.++ ++++
T Consensus 7 ~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~--~~i~l~~~v~~ 84 (138)
T 2z8h_A 7 SESAVFAYESSVHSTNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDAE--LTVTLPEEVTV 84 (138)
T ss_dssp CTTCCCCCCCSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCTT--EEEECCTTSCH
T ss_pred CCCCeeEecCCchHHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCCC--ceEEeCCCCCH
Confidence 3456678889999999999999999999999999999999999999999999999999999988764 468884 8999
Q ss_pred HHHHHHHHHhhcCeeeeccccHhhHHHHhcccChhhHHHHHHHHHhccCCCCC
Q psy11333 87 VAMDNLIEFCYTSHITVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDPSN 139 (482)
Q Consensus 87 ~~~~~~l~~~y~~~~~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i~~~~~~~~ 139 (482)
..|+.+++|+|++.+.++.+++.+++.+|++|+++.|++.|.+++..+++.+|
T Consensus 85 ~~~~~lL~~~Ytg~~~i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~~sn 137 (138)
T 2z8h_A 85 KGFEPLIQFAYTAKLILSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKFLDST 137 (138)
T ss_dssp HHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCCSCCC
T ss_pred HHHHHHHHHhcCCCcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccccc
Confidence 99999999999999999999999999999999999999999999999998766
No 24
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.91 E-value=2.6e-24 Score=172.89 Aligned_cols=123 Identities=30% Similarity=0.506 Sum_probs=115.7
Q ss_pred CceeeecCCcHHHHHHHHHHHHhcCCceeEEEEeCCeEEeceeEEeeccCHHHHHHhcCCCCcCccceEEE-ccCCHHHH
Q psy11333 11 ACLTHTSDKHPRVVLSEVSALRRHRELCDVVLNVGARKIFAHRVVLSACSPYFRAMFTGELAESRQAEVTI-RDIDDVAM 89 (482)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~i~~~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~~i~l-~~~~~~~~ 89 (482)
....++...|++.+++.++++++++.+|||+|.++|++|+|||.||+++|+||++||++++.| ....|.| +++++..|
T Consensus 3 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~~~~f 81 (127)
T 1r29_A 3 ADSQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEINPEGF 81 (127)
T ss_dssp --CCCCCTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSCHHHH
T ss_pred CCccccchhHHHHHHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCCHHHH
Confidence 346678899999999999999999999999999999999999999999999999999999998 6778999 99999999
Q ss_pred HHHHHHhhcCeeeeccccHhhHHHHhcccChhhHHHHHHHHHhcc
Q psy11333 90 DNLIEFCYTSHITVEESNVQTLLPAACLLQLVEIQDICCEFLKRQ 134 (482)
Q Consensus 90 ~~~l~~~y~~~~~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i~~~ 134 (482)
..+++|+|++.+.++.+++.+++.+|++|+++.|++.|++++.++
T Consensus 82 ~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 82 NILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp HHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred HHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999754
No 25
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.90 E-value=4e-25 Score=182.59 Aligned_cols=136 Identities=29% Similarity=0.414 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHhcCCceeEEEEeCCeEEeceeEEeeccCHHHHHHhcCCCCcCccceEEEccCCHHHHHHHHHHhhcCe
Q psy11333 21 PRVVLSEVSALRRHRELCDVVLNVGARKIFAHRVVLSACSPYFRAMFTGELAESRQAEVTIRDIDDVAMDNLIEFCYTSH 100 (482)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~Dv~i~~~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~~~~~l~~~y~~~ 100 (482)
+..+...++++++++.+|||+|.++|++|+|||.+|+++|+||++||++++.++....+.++++++..|..+++|+|++.
T Consensus 9 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~ 88 (145)
T 4eoz_A 9 ECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGK 88 (145)
T ss_dssp CCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHHhhccCc
Confidence 34688999999999999999999999999999999999999999999999999988899999999999999999999999
Q ss_pred eeeccccHhhHHHHhcccChhhHHHHHHHHHhccCCCCCHHHHHHHHhhCCCHHHH
Q psy11333 101 ITVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDPSNCLGIRAFADTHSCRDLL 156 (482)
Q Consensus 101 ~~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~L~ 156 (482)
+.++.+++.+++.+|++|++++|++.|++++.+.++.+|++.++.+|..+++.+|.
T Consensus 89 ~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~Lk 144 (145)
T 4eoz_A 89 APNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLK 144 (145)
T ss_dssp CTTGGGTHHHHHHHHHHTTCHHHHHHHHCC--------------------------
T ss_pred cCCcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHhc
Confidence 98999999999999999999999999999999999999999999999999988764
No 26
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.90 E-value=3.4e-24 Score=170.40 Aligned_cols=117 Identities=34% Similarity=0.576 Sum_probs=108.5
Q ss_pred eecCCcHHHHHHHHHHHHhcCCceeEEEEeCCeEEeceeEEeeccCHHHHHHhcCCCCcCccceEEEccCCHHHHHHHHH
Q psy11333 15 HTSDKHPRVVLSEVSALRRHRELCDVVLNVGARKIFAHRVVLSACSPYFRAMFTGELAESRQAEVTIRDIDDVAMDNLIE 94 (482)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~Dv~i~~~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~~~~~l~ 94 (482)
++...|++.+++.++++++++.+|||+|.++|++|+|||.+|+++|+||++||++++.++..+.|.++++++..|..+++
T Consensus 3 ~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll~ 82 (120)
T 2if5_A 3 IPFPDHSSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALMD 82 (120)
T ss_dssp CCCTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHHHH
T ss_pred cCccchHHHHHHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHHHH
Confidence 46678999999999999999999999999999999999999999999999999999999988999999999999999999
Q ss_pred HhhcCeeeeccccHhhHHHHhcccChhhHHHHHHHHH
Q psy11333 95 FCYTSHITVEESNVQTLLPAACLLQLVEIQDICCEFL 131 (482)
Q Consensus 95 ~~y~~~~~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i 131 (482)
|+|++.+.++.+++.+++.+|++|+++.|++.|++++
T Consensus 83 ~~Yt~~~~~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 83 FAYTATLTVSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp HHHHSCCCCCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHcCCCCccCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 9999999999999999999999999999999999987
No 27
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.89 E-value=4e-24 Score=171.22 Aligned_cols=123 Identities=28% Similarity=0.529 Sum_probs=114.8
Q ss_pred CCCCCceeeecCCcHHHHHHHHHHHHhcCCceeEEEEeCCeEEeceeEEeeccCHHHHHHhcCCCCcCccceEEEcc-CC
Q psy11333 7 PASPACLTHTSDKHPRVVLSEVSALRRHRELCDVVLNVGARKIFAHRVVLSACSPYFRAMFTGELAESRQAEVTIRD-ID 85 (482)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~i~~~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~~i~l~~-~~ 85 (482)
|..+....++...|+..+++.++++++++.+|||+|+++|++|+|||.||+++|+||++||++++.+ ...+.+++ ++
T Consensus 2 p~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~~~~~ 79 (125)
T 3ohu_A 2 PLGSPMYVYESTVHCTNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN--DLVVSLPEEVT 79 (125)
T ss_dssp CBSCCCEEEECSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS--SCEEECCTTCC
T ss_pred CCCCcceeeecHHHHHHHHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC--CcEEEeCCCCC
Confidence 4566778999999999999999999999999999999999999999999999999999999998876 56789988 99
Q ss_pred HHHHHHHHHHhhcCeeeeccccHhhHHHHhcccChhhHHHHHHHHH
Q psy11333 86 DVAMDNLIEFCYTSHITVEESNVQTLLPAACLLQLVEIQDICCEFL 131 (482)
Q Consensus 86 ~~~~~~~l~~~y~~~~~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i 131 (482)
+..|+.+++|+|++.+.++.+++.+++.+|++|++++|++.|++|+
T Consensus 80 ~~~f~~~l~~iYtg~~~~~~~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 80 ARGFGPLLQFAYTAKLLLSRENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp HHHHHHHHHHHTTSEEEECTTTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred HHHHHHHHHhHcCCceEECHHHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999887653
No 28
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.89 E-value=5.8e-24 Score=168.34 Aligned_cols=116 Identities=27% Similarity=0.443 Sum_probs=107.3
Q ss_pred eecCCcHHHHHHHHHHHHhcCCceeEEEEeCCeEEeceeEEeeccCHHHHHHhcCCCCcCccceEEEccCCHHHHHHHHH
Q psy11333 15 HTSDKHPRVVLSEVSALRRHRELCDVVLNVGARKIFAHRVVLSACSPYFRAMFTGELAESRQAEVTIRDIDDVAMDNLIE 94 (482)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~Dv~i~~~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~~~~~l~ 94 (482)
++...|+..+++.++++++++.+|||+|.++|++|+|||.||+++|+||++||++++ +..|.++++++..|+.+++
T Consensus 2 ~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~----~~~i~l~~~~~~~f~~ll~ 77 (119)
T 3b84_A 2 MSFVQHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS----GGSVVLPAGFAEIFGLLLD 77 (119)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT----CCCEEECGGGHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC----CCeEEeCCCCHHHHHHHHH
Confidence 345689999999999999999999999999999999999999999999999999876 4679999999999999999
Q ss_pred HhhcCeeeeccccHhhHHHHhcccChhhHHHHHHHHHhcc
Q psy11333 95 FCYTSHITVEESNVQTLLPAACLLQLVEIQDICCEFLKRQ 134 (482)
Q Consensus 95 ~~y~~~~~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i~~~ 134 (482)
|+|++.+.++.+++.+++.+|++|++++|++.|++++.+.
T Consensus 78 ~iYtg~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 78 FFYTGHLALTSGNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp HHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred HHcCCCCccCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999998754
No 29
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.89 E-value=6.6e-24 Score=173.62 Aligned_cols=123 Identities=24% Similarity=0.526 Sum_probs=110.8
Q ss_pred CCceeeecCCcHHHHHHHHHHHHhcCCceeEEEEeCCeEEeceeEEeeccCHHHHHHhcCCCCc--CccceEEEccCCHH
Q psy11333 10 PACLTHTSDKHPRVVLSEVSALRRHRELCDVVLNVGARKIFAHRVVLSACSPYFRAMFTGELAE--SRQAEVTIRDIDDV 87 (482)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~i~~~~~~~~~hk~iL~~~S~~F~~~~~~~~~e--~~~~~i~l~~~~~~ 87 (482)
.+...+....|+..+++.++++++++.+|||+|+++|++|+|||.||+++|+||++||++++.+ +....|.++++++.
T Consensus 20 ~~~~~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~ 99 (144)
T 2ppi_A 20 FQSMAVSDPQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVM 99 (144)
T ss_dssp CCCCCCCCTTHHHHHHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHH
T ss_pred eeeeeecCcchHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHH
Confidence 3456788899999999999999999999999999999999999999999999999999998876 55677999999999
Q ss_pred HHHHHHHHhhcCeeeeccccHhhHHHHhcccChhhHHHHHHHHHh
Q psy11333 88 AMDNLIEFCYTSHITVEESNVQTLLPAACLLQLVEIQDICCEFLK 132 (482)
Q Consensus 88 ~~~~~l~~~y~~~~~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i~ 132 (482)
+|..+++|+|++.+.++.+++.+++.+|++|++++|++.|+++|.
T Consensus 100 ~f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L~ 144 (144)
T 2ppi_A 100 VMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLE 144 (144)
T ss_dssp HHHHHHHHHTTSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHTTC-
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999998863
No 30
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.89 E-value=3.3e-23 Score=164.62 Aligned_cols=117 Identities=25% Similarity=0.490 Sum_probs=110.2
Q ss_pred eeeecCCcHHHHHHHHHHHHhcCCceeEEEEeCCeEEeceeEEeeccCHHHHHHhcCCCCcCccceEEEccCCHHHHHHH
Q psy11333 13 LTHTSDKHPRVVLSEVSALRRHRELCDVVLNVGARKIFAHRVVLSACSPYFRAMFTGELAESRQAEVTIRDIDDVAMDNL 92 (482)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~i~~~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~~~~~ 92 (482)
..++...|++.+++.++++++++.+|||+|.++|++|+|||.+|+++|+||++||+++ .+.+.++++++..|+.+
T Consensus 4 ~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~~~~~~~f~~l 78 (121)
T 1buo_A 4 IQLQNPSHPTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN-----SQHYTLDFLSPKTFQQI 78 (121)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHH
T ss_pred eeccCcchHHHHHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC-----CcEEEeCCCCHHHHHHH
Confidence 4567889999999999999999999999999999999999999999999999999874 45799999999999999
Q ss_pred HHHhhcCeeeeccccHhhHHHHhcccChhhHHHHHHHHHhcc
Q psy11333 93 IEFCYTSHITVEESNVQTLLPAACLLQLVEIQDICCEFLKRQ 134 (482)
Q Consensus 93 l~~~y~~~~~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i~~~ 134 (482)
++|+|++.+.++.+++.+++.+|++|+++.|++.|.+++.+.
T Consensus 79 l~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 79 LEYAYTATLQAKAEDLDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp HHHHHHSCCCCCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHhhcCCCcCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999754
No 31
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.89 E-value=1.3e-23 Score=170.08 Aligned_cols=119 Identities=27% Similarity=0.419 Sum_probs=103.7
Q ss_pred ecCCcHHHHHHHHHHHHhcCCceeEEEEeCCeEEeceeEEeeccCHHHHHHhcCCCCcCccceEEEccCCHHHHHHHHHH
Q psy11333 16 TSDKHPRVVLSEVSALRRHRELCDVVLNVGARKIFAHRVVLSACSPYFRAMFTGELAESRQAEVTIRDIDDVAMDNLIEF 95 (482)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~Dv~i~~~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~~~~~l~~ 95 (482)
....|...+++.++++++++.+|||+|++++++|+|||.||+++|+||++||++++ ...|.|+++++.+|+.+++|
T Consensus 4 ~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~----~~~i~l~~~~~~~f~~lL~f 79 (135)
T 2yy9_A 4 GSSGHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT----GGSVVLPAGFAEIFGLLLDF 79 (135)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC--------CCEEECGGGHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC----CCeEEeCCCCHHHHHHHHHH
Confidence 35689999999999999999999999999999999999999999999999999876 45799999999999999999
Q ss_pred hhcCeeeeccccHhhHHHHhcccChhhHHHHHHHHHhccCCCC
Q psy11333 96 CYTSHITVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDPS 138 (482)
Q Consensus 96 ~y~~~~~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i~~~~~~~ 138 (482)
+|++.+.++.+++.+++.+|++|+++.|++.|++++.+++...
T Consensus 80 iYtg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~ 122 (135)
T 2yy9_A 80 FYTGHLALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQ 122 (135)
T ss_dssp HHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC------
T ss_pred HhCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCC
Confidence 9999999999999999999999999999999999999887543
No 32
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.88 E-value=2.6e-23 Score=164.06 Aligned_cols=111 Identities=26% Similarity=0.449 Sum_probs=105.1
Q ss_pred CCcHHHHHHHHHHHHhcCCceeEEEEeCCeEEeceeEEeeccCHHHHHHhcCCCCcCccceEEEc--cCCHHHHHHHHHH
Q psy11333 18 DKHPRVVLSEVSALRRHRELCDVVLNVGARKIFAHRVVLSACSPYFRAMFTGELAESRQAEVTIR--DIDDVAMDNLIEF 95 (482)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~Dv~i~~~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~~i~l~--~~~~~~~~~~l~~ 95 (482)
..|+..+++.++++++++.+|||+|.++|++|+|||.||+++|+||++||+++ .++.+.|+ ++++.+|..+++|
T Consensus 3 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~~i~l~~~~~~~~~f~~ll~~ 78 (116)
T 2vpk_A 3 SHHCEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST----SENNVFLDQSQVKADGFQKLLEF 78 (116)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC----CCSCEECCTTTCCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC----CCCeEEeecCCCCHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999987 35568887 9999999999999
Q ss_pred hhcCeeeeccccHhhHHHHhcccChhhHHHHHHHHHh
Q psy11333 96 CYTSHITVEESNVQTLLPAACLLQLVEIQDICCEFLK 132 (482)
Q Consensus 96 ~y~~~~~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i~ 132 (482)
+|++.+.++.+++.+++.+|++|+++.|++.|++++.
T Consensus 79 ~Yt~~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 79 IYTGTLNLDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp HHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HcCCCcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999985
No 33
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.88 E-value=1.7e-23 Score=166.93 Aligned_cols=120 Identities=29% Similarity=0.556 Sum_probs=109.9
Q ss_pred CceeeecCCcHHHHHHHHHHHHhcCCceeEEEEeCCeEEeceeEEeeccCHHHHHHhcCCCCcCccceEEE-ccCCHHHH
Q psy11333 11 ACLTHTSDKHPRVVLSEVSALRRHRELCDVVLNVGARKIFAHRVVLSACSPYFRAMFTGELAESRQAEVTI-RDIDDVAM 89 (482)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~i~~~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~~i~l-~~~~~~~~ 89 (482)
++..+....|++.+++.++++++++.+|||+|.++|++|+|||.||+++|+||++||++++.++ ..+.+ .++++..|
T Consensus 3 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~--~~i~l~~~v~~~~f 80 (124)
T 2ihc_A 3 SVFAYESSVHSTNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGE--LNITLPEEVTVKGF 80 (124)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---C--EEEECCTTSCHHHH
T ss_pred ceeeecCcchHHHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCCC--ceEeecCCcCHHHH
Confidence 4677889999999999999999999999999999999999999999999999999999988764 46888 58999999
Q ss_pred HHHHHHhhcCeeeeccccHhhHHHHhcccChhhHHHHHHHHHh
Q psy11333 90 DNLIEFCYTSHITVEESNVQTLLPAACLLQLVEIQDICCEFLK 132 (482)
Q Consensus 90 ~~~l~~~y~~~~~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i~ 132 (482)
+.+++|+|++.+.++.+++.+++.+|++|+++.|++.|.+++.
T Consensus 81 ~~lL~~iYtg~~~i~~~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 81 EPLIQFAYTAKLILSKENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HHHHHHHHHSEEEEETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred HHHHHHhcCCCcccCHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999998864
No 34
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.88 E-value=3e-23 Score=166.90 Aligned_cols=123 Identities=28% Similarity=0.463 Sum_probs=106.9
Q ss_pred CCCCceeeecCCcHHHHHHHHHHHHhcCCceeEEEEeCCeEEeceeEEeeccCHHHHHHhcCCCCcCccceEEEc-cCCH
Q psy11333 8 ASPACLTHTSDKHPRVVLSEVSALRRHRELCDVVLNVGARKIFAHRVVLSACSPYFRAMFTGELAESRQAEVTIR-DIDD 86 (482)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~i~~~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~~i~l~-~~~~ 86 (482)
+..+...++...|.+.+++.++++++++.+|||+|.++|++|+|||.+|+++|+||++||+++ ....|.++ ++++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~----~~~~i~l~~~~~~ 79 (129)
T 3ga1_A 4 GSAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS----RSAVVELPAAVQP 79 (129)
T ss_dssp ---CEEEEECTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC----CCSEEECCTTCCH
T ss_pred CCCceEEeecCcHHHHHHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC----CCCEEEECCCCCH
Confidence 445567889999999999999999999999999999999999999999999999999999886 45679996 9999
Q ss_pred HHHHHHHHHhhcCeeeeccccHhhHHHHhcccChhhHHHHHHHHHhcc
Q psy11333 87 VAMDNLIEFCYTSHITVEESNVQTLLPAACLLQLVEIQDICCEFLKRQ 134 (482)
Q Consensus 87 ~~~~~~l~~~y~~~~~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i~~~ 134 (482)
..|+.+++|+|++.+.++.+++.+++.+|++|++++|++.|++|+.+.
T Consensus 80 ~~f~~ll~~iYtg~~~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 80 QSFQQILSFCYTGRLSMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp HHHHHHHHHHHHSEEECCTTTHHHHHHHHHHTTBTTSSCC--------
T ss_pred HHHHHHHHHHhCCccccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999764
No 35
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.86 E-value=5.6e-23 Score=162.69 Aligned_cols=113 Identities=27% Similarity=0.521 Sum_probs=105.4
Q ss_pred eecCCcHHHHHHHHHHHHhcCCceeEEEEeCCeEEeceeEEeeccCHHHHHHhcCCCCcCccceEEEccCCHHHHHHHHH
Q psy11333 15 HTSDKHPRVVLSEVSALRRHRELCDVVLNVGARKIFAHRVVLSACSPYFRAMFTGELAESRQAEVTIRDIDDVAMDNLIE 94 (482)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~Dv~i~~~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~~~~~l~ 94 (482)
++...|++.+++.++++++++.+|||+|.++|++|+|||.+|+++|+||++||+++ ..++.++++++..|+.+++
T Consensus 5 ~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~~~~~~~f~~ll~ 79 (119)
T 2q81_A 5 SDFPQHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ-----KDVVHLDISNAAGLGQVLE 79 (119)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC-----CSGGGGGGCCHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeCCCCHHHHHHHHH
Confidence 34568899999999999999999999999999999999999999999999999863 3457788999999999999
Q ss_pred HhhcCeeeeccccHhhHHHHhcccChhhHHHHHHHHHh
Q psy11333 95 FCYTSHITVEESNVQTLLPAACLLQLVEIQDICCEFLK 132 (482)
Q Consensus 95 ~~y~~~~~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i~ 132 (482)
|+|++.+.++.+++.+++.+|++|++++|++.|++++.
T Consensus 80 ~~Ytg~~~i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 80 FMYTAKLSLSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp HHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHcCCCCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999985
No 36
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.86 E-value=1.7e-22 Score=157.75 Aligned_cols=104 Identities=33% Similarity=0.513 Sum_probs=93.5
Q ss_pred HHhcCCceeEEEEeCC----eEEeceeEEeeccCHHHHHHhcCCCCcCccceEEEccCCHHHHHHHHHHhhcCeeeeccc
Q psy11333 31 LRRHRELCDVVLNVGA----RKIFAHRVVLSACSPYFRAMFTGELAESRQAEVTIRDIDDVAMDNLIEFCYTSHITVEES 106 (482)
Q Consensus 31 ~~~~~~~~Dv~i~~~~----~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~~~~~l~~~y~~~~~~~~~ 106 (482)
|++++.+|||+|++++ ++|+|||.+|+++|+||++||++++.|+. ..|.++++++..|..+++|+|++.+.++.+
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~~~~f~~~l~~iYt~~~~~~~~ 80 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVEPAAFLILLKYMYSDEIDLEAD 80 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSCHHHHHHHHHHHHHCCCCCCTT
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCCHHHHHHHHHHHcCCCccCCHH
Confidence 5788999999999998 89999999999999999999999999998 889999999999999999999999999999
Q ss_pred cHhhHHHHhcccChhhHHHHHHHHHhccC
Q psy11333 107 NVQTLLPAACLLQLVEIQDICCEFLKRQL 135 (482)
Q Consensus 107 ~~~~ll~~a~~~~~~~L~~~~~~~i~~~~ 135 (482)
++.+++.+|++|+++.|++.|.+++.+++
T Consensus 81 ~~~~ll~~A~~~~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 81 TVLATLYAAKKYIVPALAKACVNFLETSL 109 (109)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhC
Confidence 99999999999999999999999998653
No 37
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.84 E-value=3.8e-21 Score=151.02 Aligned_cols=110 Identities=26% Similarity=0.398 Sum_probs=103.0
Q ss_pred CceeeecCCcHHHHHHHHHHHHhcCCceeEEEEeCCeEEeceeEEeeccCHHHHHHhcCCCCcCccceEEEccCCHHHHH
Q psy11333 11 ACLTHTSDKHPRVVLSEVSALRRHRELCDVVLNVGARKIFAHRVVLSACSPYFRAMFTGELAESRQAEVTIRDIDDVAMD 90 (482)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~i~~~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~~~ 90 (482)
....+....|+..+++.++++++++.+|||+|.++|++|+|||.+|+++|+||++||+++ ...|.++++++..|+
T Consensus 5 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~-----~~~i~l~~~~~~~f~ 79 (116)
T 3fkc_A 5 KLISATDIQYSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA-----GQVVELSFIRAEIFA 79 (116)
T ss_dssp CCCCCCCTTHHHHHHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHH
T ss_pred ceeeecCccHHHHHHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeCCCCHHHHH
Confidence 446677889999999999999999999999999999999999999999999999999875 457999999999999
Q ss_pred HHHHHhhcCee-eeccccHhhHHHHhcccChhhHHH
Q psy11333 91 NLIEFCYTSHI-TVEESNVQTLLPAACLLQLVEIQD 125 (482)
Q Consensus 91 ~~l~~~y~~~~-~~~~~~~~~ll~~a~~~~~~~L~~ 125 (482)
.+++|+|++.+ .++.+++.+++.+|++|+++.|++
T Consensus 80 ~~l~~~Ytg~~~~~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 80 EILNYIYSSKIVRVRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp HHHHHHTTSCCCSCCHHHHHHHHHHHHHHTCHHHHT
T ss_pred HHHHhhcCCCcCCCCHHHHHHHHHHHHHhCccccCc
Confidence 99999999998 799999999999999999999874
No 38
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.81 E-value=2.1e-20 Score=147.06 Aligned_cols=105 Identities=20% Similarity=0.332 Sum_probs=94.3
Q ss_pred CCcHHHHHHHHHHHHhcCCceeEEEEeCCeEEeceeEEeeccCHHHHHHhcCCCCcCccceEEEccCCHHHHHHHHHHhh
Q psy11333 18 DKHPRVVLSEVSALRRHRELCDVVLNVGARKIFAHRVVLSACSPYFRAMFTGELAESRQAEVTIRDIDDVAMDNLIEFCY 97 (482)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~Dv~i~~~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~~~~~l~~~y 97 (482)
..|...+++.++ +.++.+|||+|+++|++|+|||.||+++|+||++ .+..+.++++++..|..+++|+|
T Consensus 13 ~~~~~~~l~~l~--r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~---------~~~~i~l~~v~~~~f~~ll~fiY 81 (119)
T 3m5b_A 13 PYGSDRLVQLAA--RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR---------RGQWALGEGISPSTFAQLLNFVY 81 (119)
T ss_dssp TTTTCHHHHHHH--HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC---------CEEEECCSSCCHHHHHHHHHHHT
T ss_pred CcchHHHHHHHH--HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc---------CCCEEEeCCCCHHHHHHHHHHHc
Confidence 346677888886 5678999999999999999999999999999984 34568899999999999999999
Q ss_pred cCeeeeccccHhhHHHHhcccChhhHHHHHHHHHhc
Q psy11333 98 TSHITVEESNVQTLLPAACLLQLVEIQDICCEFLKR 133 (482)
Q Consensus 98 ~~~~~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i~~ 133 (482)
+|.+.++.+|+.+++.+|++|+++.|++.|++++..
T Consensus 82 tg~~~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 82 GESVELQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp TCCEEECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred CCCcCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 999999999999999999999999999999998764
No 39
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=1.1e-14 Score=111.25 Aligned_cols=95 Identities=28% Similarity=0.463 Sum_probs=89.6
Q ss_pred hccCCCCCHHHHHHHHhhCCCHHHHHHHHHHHHHhHHHHhcccccccCCHHHHhHhhcCCCcccCChHHHHHHHHHHHhc
Q psy11333 132 KRQLDPSNCLGIRAFADTHSCRDLLRIADKFTQHNFQEVMESEEFLILPVAQLVDIISSDELNVRSEEQVFNAIMSWLKY 211 (482)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~i~~~~~~l~~~~~f~~l~~~~l~~il~~~~l~~~~e~~v~~~~~~wi~~ 211 (482)
..+++++||+.++.+|+.+++++|.+.|.+|+..||.++.++++|..||.+.|.+++++| +.+|..+|+++++|+++
T Consensus 5 ~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~~L~~lL~sd---v~~E~~vf~av~~Wv~~ 81 (105)
T 2eqx_A 5 SSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHRLLTDIISDG---VPCSQNPTEAIEAWINF 81 (105)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHHHHHHHHHTC---EETTSCHHHHHHHHHHT
T ss_pred hccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCHHHHHHHHcCC---CCCHHHHHHHHHHHHHc
Confidence 457788999999999999999999999999999999999999999999999999999997 78999999999999999
Q ss_pred ChhHHHHHHHHhhccccC
Q psy11333 212 NVSERRQHLAQVLQHVRL 229 (482)
Q Consensus 212 ~~~~~~~~~~~l~~~~r~ 229 (482)
++..|.++++.+++++|.
T Consensus 82 d~~~R~~~~~~Ll~~VR~ 99 (105)
T 2eqx_A 82 NKEEREAFAESLRTSLKE 99 (105)
T ss_dssp THHHHHHHHHHHHHHCCE
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999898999999999984
No 40
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.32 E-value=1.9e-12 Score=106.86 Aligned_cols=103 Identities=15% Similarity=0.303 Sum_probs=86.1
Q ss_pred EEEEe-CCeEEeceeEEeeccCHHHHHHhcC-CCC-cCccceEEEccCCHHHHHHHHHHhhcCe----------------
Q psy11333 40 VVLNV-GARKIFAHRVVLSACSPYFRAMFTG-ELA-ESRQAEVTIRDIDDVAMDNLIEFCYTSH---------------- 100 (482)
Q Consensus 40 v~i~~-~~~~~~~hk~iL~~~S~~F~~~~~~-~~~-e~~~~~i~l~~~~~~~~~~~l~~~y~~~---------------- 100 (482)
|+|+. +|+.|.+|+.+ +..|++|+.||++ ++. ++..+.|.|++++...+..+++|||+..
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~ 81 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 81 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------C
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccch
Confidence 67775 69999999999 7899999999998 666 6777789999999999999999999876
Q ss_pred ----------eeeccccHhhHHHHhcccChhhHHHHHHHHHhccCCCCCHHHH
Q psy11333 101 ----------ITVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDPSNCLGI 143 (482)
Q Consensus 101 ----------~~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i~~~~~~~~~~~~ 143 (482)
+.++.+++.+|+.+|++|++..|.+.|++++...+...+.-.+
T Consensus 82 ~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eei 134 (159)
T 2ast_A 82 DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEI 134 (159)
T ss_dssp CCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHH
T ss_pred hhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 5677888999999999999999999999999888776555433
No 41
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.10 E-value=8.1e-11 Score=88.12 Aligned_cols=80 Identities=25% Similarity=0.339 Sum_probs=65.1
Q ss_pred EEEEe-CCeEEeceeEEeeccCHHHHHHhcC--CCCcCccceEEEccCCHHHHHHHHHHhh-----c---Ceee---ecc
Q psy11333 40 VVLNV-GARKIFAHRVVLSACSPYFRAMFTG--ELAESRQAEVTIRDIDDVAMDNLIEFCY-----T---SHIT---VEE 105 (482)
Q Consensus 40 v~i~~-~~~~~~~hk~iL~~~S~~F~~~~~~--~~~e~~~~~i~l~~~~~~~~~~~l~~~y-----~---~~~~---~~~ 105 (482)
|+++. +|++|.+||.+ +..|++|++||++ .+.|+..+.|.|++++...++.+++||| + +.+. ++.
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~~ 82 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP 82 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCCG
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcCCH
Confidence 55665 68999999999 8899999999987 6777778889999999999999999999 4 4555 889
Q ss_pred ccHhhHHHHhcccCh
Q psy11333 106 SNVQTLLPAACLLQL 120 (482)
Q Consensus 106 ~~~~~ll~~a~~~~~ 120 (482)
+++.+|+.+|++|++
T Consensus 83 ~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 83 EIALELLMAANFLDC 97 (97)
T ss_dssp GGHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhhhCC
Confidence 999999999999874
No 42
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=98.92 E-value=1.2e-09 Score=87.75 Aligned_cols=97 Identities=13% Similarity=0.261 Sum_probs=82.0
Q ss_pred EEEEe-CCeEEeceeEEeeccCHHHHHHhcCCCCcCccceEEEccCCHHHHHHHHHHhhcCe------------------
Q psy11333 40 VVLNV-GARKIFAHRVVLSACSPYFRAMFTGELAESRQAEVTIRDIDDVAMDNLIEFCYTSH------------------ 100 (482)
Q Consensus 40 v~i~~-~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~~~~~l~~~y~~~------------------ 100 (482)
|+++. +|+.|.+|+.+ +..|.+|+.|+.+.- .+.|.|++++...++.+++|||...
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~----~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~ 78 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG----MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDD 78 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC----CSSEECTTCCHHHHHHHHHHHHHHTTCC---------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC----CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhh
Confidence 67777 68999999998 789999999997531 4579999999999999999998754
Q ss_pred --------eeeccccHhhHHHHhcccChhhHHHHHHHHHhccCCCCCHH
Q psy11333 101 --------ITVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDPSNCL 141 (482)
Q Consensus 101 --------~~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i~~~~~~~~~~ 141 (482)
+.++.+++.+|+.+|++|++..|.+.|++++...+...+.-
T Consensus 79 i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~e 127 (141)
T 1fs1_B 79 IPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPE 127 (141)
T ss_dssp --HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHH
T ss_pred hhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHH
Confidence 34677789999999999999999999999998877655543
No 43
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.78 E-value=1.5e-09 Score=89.26 Aligned_cols=99 Identities=15% Similarity=0.292 Sum_probs=55.0
Q ss_pred EEEEe-CCeEEeceeEEeeccCHHHHHHhcCCCCcCccceEEEccCCHHHHHHHHHHhhcCe------------------
Q psy11333 40 VVLNV-GARKIFAHRVVLSACSPYFRAMFTGELAESRQAEVTIRDIDDVAMDNLIEFCYTSH------------------ 100 (482)
Q Consensus 40 v~i~~-~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~~~~~l~~~y~~~------------------ 100 (482)
|+|+. +|+.|.+|+.+ +..|++|+.|+.+.. ..+.|.|++++...+..+++|||...
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~ 81 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC---VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDD 81 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC---------------CCTTSCHHHHHHHHHC-----------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC---CCCceeCCcCcHHHHHHHHHHHHHcccCCCcccccccccccccc
Confidence 66665 69999999998 779999999998642 34579999999999999999998864
Q ss_pred ---------eeeccccHhhHHHHhcccChhhHHHHHHHHHhccCCCCCHHH
Q psy11333 101 ---------ITVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDPSNCLG 142 (482)
Q Consensus 101 ---------~~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i~~~~~~~~~~~ 142 (482)
+.++.+++.+|+.+|++|++..|.+.|++++...+...+.-.
T Consensus 82 ~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~ee 132 (160)
T 2p1m_A 82 DLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEE 132 (160)
T ss_dssp -------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHH
T ss_pred hhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHH
Confidence 256778899999999999999999999999998886555433
No 44
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.35 E-value=4.3e-07 Score=67.69 Aligned_cols=79 Identities=19% Similarity=0.311 Sum_probs=65.9
Q ss_pred EEEEe-CCeEEeceeEEeeccCHHHHHHhcCCCCcCccceEEEccCCHHHHHHHHHHhhcCe--------------eeec
Q psy11333 40 VVLNV-GARKIFAHRVVLSACSPYFRAMFTGELAESRQAEVTIRDIDDVAMDNLIEFCYTSH--------------ITVE 104 (482)
Q Consensus 40 v~i~~-~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~~~~~l~~~y~~~--------------~~~~ 104 (482)
|+++. +|+.|.+++.+ +..|..++.|+.+++ +...+.|.|++++...++.+++||+... ..++
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~vd 83 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFEIP 83 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCCC
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-ccCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCCccCC
Confidence 67776 79999999997 779999999998865 5555789999999999999999998632 1466
Q ss_pred cccHhhHHHHhcccCh
Q psy11333 105 ESNVQTLLPAACLLQL 120 (482)
Q Consensus 105 ~~~~~~ll~~a~~~~~ 120 (482)
.+.+.+|+.+|++|++
T Consensus 84 ~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 84 TEMSLELLLAADYLSI 99 (99)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhCc
Confidence 7778899999998864
No 45
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.31 E-value=4.1e-07 Score=67.42 Aligned_cols=80 Identities=23% Similarity=0.292 Sum_probs=62.3
Q ss_pred EEEEe-CCeEEeceeEEeeccCHHHHHHhcC--CCCcCccceEEEccCCHHHHHHHHHHhhcCe-----------eeecc
Q psy11333 40 VVLNV-GARKIFAHRVVLSACSPYFRAMFTG--ELAESRQAEVTIRDIDDVAMDNLIEFCYTSH-----------ITVEE 105 (482)
Q Consensus 40 v~i~~-~~~~~~~hk~iL~~~S~~F~~~~~~--~~~e~~~~~i~l~~~~~~~~~~~l~~~y~~~-----------~~~~~ 105 (482)
|+++. +|++|.+++.+ +..|..++.|+.. .+.|+..+.|.|++++...++.+++||+... ..++.
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~vd~ 81 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP 81 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCCCCT
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccCCCcccCH
Confidence 56666 79999999997 7799999999985 2356666789999999999999999998632 25777
Q ss_pred ccHhhHHHHhcccCh
Q psy11333 106 SNVQTLLPAACLLQL 120 (482)
Q Consensus 106 ~~~~~ll~~a~~~~~ 120 (482)
+.+.+|+.+|++|++
T Consensus 82 ~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 82 EIALELLMAANFLDC 96 (96)
T ss_dssp TTHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCc
Confidence 889999999998864
No 46
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.08 E-value=5.9e-06 Score=68.25 Aligned_cols=98 Identities=12% Similarity=0.269 Sum_probs=72.7
Q ss_pred eEEEEe-CCeEEeceeEEeeccCHHHHHHhcCCCC----cCccceEEEccCCHHHHHHHHHHhhcCe-------------
Q psy11333 39 DVVLNV-GARKIFAHRVVLSACSPYFRAMFTGELA----ESRQAEVTIRDIDDVAMDNLIEFCYTSH------------- 100 (482)
Q Consensus 39 Dv~i~~-~~~~~~~hk~iL~~~S~~F~~~~~~~~~----e~~~~~i~l~~~~~~~~~~~l~~~y~~~------------- 100 (482)
-|+|+. +|+.|.+++.+ +..|..++.|+...-. +...+.|.|++++...+..+++||+...
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~~~~~ 86 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSR 86 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC-------
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCccccccccc
Confidence 466766 58899999998 5689999999975322 1223679999999999999999997632
Q ss_pred ------------eeeccccHhhHHHHhcccChhhHHHHHHHHHhccCCC
Q psy11333 101 ------------ITVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDP 137 (482)
Q Consensus 101 ------------~~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i~~~~~~ 137 (482)
+.++.+.+.+|+.+|++|++..|.+.|++.+...+..
T Consensus 87 ~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikg 135 (169)
T 3v7d_A 87 KSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRG 135 (169)
T ss_dssp -CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred ccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcC
Confidence 1245556778888888888888888888887655543
No 47
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.06 E-value=1.1e-05 Score=61.21 Aligned_cols=94 Identities=13% Similarity=0.220 Sum_probs=75.1
Q ss_pred eEEEEeCCeEEeceeEEeeccC-HHHHHHhcCCCCc----CccceEEEccCCHHHHHHHHHHhhcCeeeecccc-HhhHH
Q psy11333 39 DVVLNVGARKIFAHRVVLSACS-PYFRAMFTGELAE----SRQAEVTIRDIDDVAMDNLIEFCYTSHITVEESN-VQTLL 112 (482)
Q Consensus 39 Dv~i~~~~~~~~~hk~iL~~~S-~~F~~~~~~~~~e----~~~~~i~l~~~~~~~~~~~l~~~y~~~~~~~~~~-~~~ll 112 (482)
-|.|.|+|..|...+..|+... .+|..|+++.... ...+.+-+ |-++..|..+++|+.+|.+.++.+- ...++
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~~~~~~l~ 85 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEEGVL 85 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCTTSCHHHHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCCCCCHHHHH
Confidence 3788999999999999998765 5789998875321 12234444 7899999999999999987765553 36789
Q ss_pred HHhcccChhhHHHHHHHHHhc
Q psy11333 113 PAACLLQLVEIQDICCEFLKR 133 (482)
Q Consensus 113 ~~a~~~~~~~L~~~~~~~i~~ 133 (482)
+-|++|++++|++.|.+.|.+
T Consensus 86 ~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 86 EEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp HHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHhc
Confidence 999999999999999988764
No 48
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.84 E-value=8.8e-06 Score=61.88 Aligned_cols=81 Identities=22% Similarity=0.277 Sum_probs=61.6
Q ss_pred eEEEE-eCCeEEeceeEEeeccCHHHHHHhcC--CCCcCccceEEEccCCHHHHHHHHHHhhcCe-----------eeec
Q psy11333 39 DVVLN-VGARKIFAHRVVLSACSPYFRAMFTG--ELAESRQAEVTIRDIDDVAMDNLIEFCYTSH-----------ITVE 104 (482)
Q Consensus 39 Dv~i~-~~~~~~~~hk~iL~~~S~~F~~~~~~--~~~e~~~~~i~l~~~~~~~~~~~l~~~y~~~-----------~~~~ 104 (482)
-|+++ .+|..|.+.+.+ +..|..++.|+.. .+.+...+.|.|++++...++++++||+... ..++
T Consensus 18 ~v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~i~~w~vd 96 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIA 96 (112)
T ss_dssp EEEEECTTSCEEEEEHHH-HHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSCCCCCCCC
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCCCCCcccC
Confidence 36677 468999999995 5689999999984 2345555689999999999999999997632 2567
Q ss_pred cccHhhHHHHhcccCh
Q psy11333 105 ESNVQTLLPAACLLQL 120 (482)
Q Consensus 105 ~~~~~~ll~~a~~~~~ 120 (482)
.+.+.+|+.+|++|++
T Consensus 97 ~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 97 PEIALELLMAANFLDC 112 (112)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCc
Confidence 7788999999998864
No 49
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.84 E-value=0.0017 Score=56.80 Aligned_cols=148 Identities=18% Similarity=0.126 Sum_probs=102.1
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEECCEEEEEecCCCCCCCCeEEEEeCCCCceeecC
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDV 366 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 366 (482)
++.||+-.|..+ .+.+..+|+.+.+-...-+++..-.+.+++..+++||+....+ +.+++||+.+.+-..-
T Consensus 30 ~~~LyestG~~g---~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~-----~~v~v~D~~tl~~~~t- 100 (243)
T 3mbr_X 30 RGHLYESTGETG---RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRN-----HEGFVYDLATLTPRAR- 100 (243)
T ss_dssp TTEEEEEECCTT---SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-----SEEEEEETTTTEEEEE-
T ss_pred CCEEEEECCCCC---CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeC-----CEEEEEECCcCcEEEE-
Confidence 578888887532 2578999999998766566666667778888999999986543 5899999998874422
Q ss_pred CCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceee-c--CCCCCCccc-eEEEEECCEEEEEcCCCCCC
Q psy11333 367 APTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSR-V--APMTTRRLG-VAVAVLGGFLYAIGGSDGQS 442 (482)
Q Consensus 367 ~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~-~--~~~~~~r~~-~~~~~~~~~i~v~GG~~~~~ 442 (482)
.+.+..+.+++.-++++|+.-| .+.+..+||.+.+-.. + ...+.+... -.+...+|+||+---.
T Consensus 101 --i~~~~~Gwglt~dg~~L~vSdg------s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~---- 168 (243)
T 3mbr_X 101 --FRYPGEGWALTSDDSHLYMSDG------TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWL---- 168 (243)
T ss_dssp --EECSSCCCEEEECSSCEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETT----
T ss_pred --EeCCCCceEEeeCCCEEEEECC------CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECC----
Confidence 2223345677777788999865 2579999999875432 1 122223222 2344568999966532
Q ss_pred CCCeEEEEeCCCCc
Q psy11333 443 PLNTVERFDPKLNR 456 (482)
Q Consensus 443 ~~~~~~~y~~~~~~ 456 (482)
.++|.+.||++.+
T Consensus 169 -s~~I~vIDp~tG~ 181 (243)
T 3mbr_X 169 -TSRIARIDPASGK 181 (243)
T ss_dssp -TTEEEEECTTTCB
T ss_pred -CCeEEEEECCCCC
Confidence 2589999998875
No 50
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.66 E-value=0.0012 Score=57.80 Aligned_cols=122 Identities=19% Similarity=0.186 Sum_probs=87.3
Q ss_pred ccCCCCCCCc--eeEEEECCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEECCEEEEEeccCCCc
Q psy11333 318 VAPMSKRRCG--VGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQ 395 (482)
Q Consensus 318 ~~~~~~~~~~--~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~ 395 (482)
+...|.+... .+....++.||+..|..+ .+.+.++|+.+++=... .+++......+++..+++||+....
T Consensus 12 ~~~~phd~~~ftqGL~~~~~~LyestG~~g---~S~v~~vD~~tgkv~~~-~~l~~~~fgeGi~~~~~~ly~ltw~---- 83 (243)
T 3mbr_X 12 VKRYPHDTTAFTEGLFYLRGHLYESTGETG---RSSVRKVDLETGRILQR-AEVPPPYFGAGIVAWRDRLIQLTWR---- 83 (243)
T ss_dssp EEEEECCTTCCEEEEEEETTEEEEEECCTT---SCEEEEEETTTCCEEEE-EECCTTCCEEEEEEETTEEEEEESS----
T ss_pred EEEcCCCCccccccEEEECCEEEEECCCCC---CceEEEEECCCCCEEEE-EeCCCCcceeEEEEeCCEEEEEEee----
Confidence 3333444443 477778999999998654 35789999999986655 4556555667788899999999643
Q ss_pred ccCeEEEEeCCCCceeecCCCCCCccceEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 396 CLNHVERYDPKENKWSRVAPMTTRRLGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 396 ~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
.+.+++||+.+-+- +...+.+..+.+++.-++++|+.-|. +.+..+||++.+
T Consensus 84 -~~~v~v~D~~tl~~--~~ti~~~~~Gwglt~dg~~L~vSdgs------~~l~~iDp~t~~ 135 (243)
T 3mbr_X 84 -NHEGFVYDLATLTP--RARFRYPGEGWALTSDDSHLYMSDGT------AVIRKLDPDTLQ 135 (243)
T ss_dssp -SSEEEEEETTTTEE--EEEEECSSCCCEEEECSSCEEEECSS------SEEEEECTTTCC
T ss_pred -CCEEEEEECCcCcE--EEEEeCCCCceEEeeCCCEEEEECCC------CeEEEEeCCCCe
Confidence 36799999987653 33444445667777667788888662 579999998765
No 51
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.64 E-value=0.0028 Score=55.94 Aligned_cols=148 Identities=16% Similarity=0.145 Sum_probs=98.8
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEECCEEEEEecCCCCCCCCeEEEEeCCCCceeecC
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDV 366 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 366 (482)
++.||+..|..+ .+.+..+|+.+.+-...-+++..-.+.+++..+++||+....+ +.+++||+.+.+-..-
T Consensus 52 ~~~LyestG~~g---~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~-----~~v~v~D~~t~~~~~t- 122 (262)
T 3nol_A 52 NGYFYESTGLNG---RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN-----GLGFVWNIRNLRQVRS- 122 (262)
T ss_dssp TTEEEEEEEETT---EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-----SEEEEEETTTCCEEEE-
T ss_pred CCEEEEECCCCC---CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC-----CEEEEEECccCcEEEE-
Confidence 679999888542 2478999999998755445555455667788899999996533 5899999998875422
Q ss_pred CCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeec-C--CCCCCccce-EEEEECCEEEEEcCCCCCC
Q psy11333 367 APTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRV-A--PMTTRRLGV-AVAVLGGFLYAIGGSDGQS 442 (482)
Q Consensus 367 ~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~--~~~~~r~~~-~~~~~~~~i~v~GG~~~~~ 442 (482)
.+.+-.+.+++.-++++|+.-| .+.++.+||.+.+-..- + .-+.+.... .+...+|+||+---.
T Consensus 123 --i~~~~eG~glt~dg~~L~~SdG------s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~---- 190 (262)
T 3nol_A 123 --FNYDGEGWGLTHNDQYLIMSDG------TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQ---- 190 (262)
T ss_dssp --EECSSCCCCEEECSSCEEECCS------SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETT----
T ss_pred --EECCCCceEEecCCCEEEEECC------CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEcc----
Confidence 2222345566666778888865 25799999998764332 2 111221111 244558999965422
Q ss_pred CCCeEEEEeCCCCc
Q psy11333 443 PLNTVERFDPKLNR 456 (482)
Q Consensus 443 ~~~~~~~y~~~~~~ 456 (482)
.++|.+.||++.+
T Consensus 191 -~~~I~vIDp~tG~ 203 (262)
T 3nol_A 191 -TNKIVRIDPETGK 203 (262)
T ss_dssp -SSEEEEECTTTCB
T ss_pred -CCeEEEEECCCCc
Confidence 3689999999875
No 52
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=97.64 E-value=8e-06 Score=74.36 Aligned_cols=135 Identities=17% Similarity=0.209 Sum_probs=93.0
Q ss_pred CHHHHHHhcCCCCcCccceEEE-ccCCHHHHHHHHHHhhcCee-eeccccHhhHHHHhcccChhhHHHHHHHHHhccCCC
Q psy11333 60 SPYFRAMFTGELAESRQAEVTI-RDIDDVAMDNLIEFCYTSHI-TVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDP 137 (482)
Q Consensus 60 S~~F~~~~~~~~~e~~~~~i~l-~~~~~~~~~~~l~~~y~~~~-~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i~~~~~~ 137 (482)
...++.+|+|....+..+...+ ...+...+..+.+.|..... .++.+||..++.+|+.+++++|.+.|.+++..++..
T Consensus 94 ~~ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~ 173 (279)
T 3i3n_A 94 EAVIEYMYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKAADMIRRNFHK 173 (279)
T ss_dssp HHHHHHHHHSEEEEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTHHH
T ss_pred HHHHHhhCcCCcccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 3456788888765444433222 22233345566666655432 588999999999999999999999999999987642
Q ss_pred ----CC-----HHHHHHH--HhhCC---CHHHHHHHHHHHHH-------hHHHHhcccccccCCHHHHhHhhcCCCcc
Q psy11333 138 ----SN-----CLGIRAF--ADTHS---CRDLLRIADKFTQH-------NFQEVMESEEFLILPVAQLVDIISSDELN 194 (482)
Q Consensus 138 ----~~-----~~~~~~~--~~~~~---~~~L~~~~~~~i~~-------~~~~l~~~~~f~~l~~~~l~~il~~~~l~ 194 (482)
.. .-.+..+ ..... ...+++++.+|+.. ++.++++..+|..++.+.|.+.+..+.+.
T Consensus 174 v~~~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~~~~r~~~~~~ll~~VRf~l~~~~~L~~~v~~~~l~ 251 (279)
T 3i3n_A 174 VIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQMKPTYLTRHVKPERLV 251 (279)
T ss_dssp HTTSSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTTHHHHTTTHHHHHTTSCGGGSCHHHHHHTTTTSHHH
T ss_pred HhcCcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcCHHHHHHHHHHHHHhcCCCCCCHHHHHHHhhccchh
Confidence 11 1111111 11222 34689999999964 46789999999999999999999877664
No 53
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.51 E-value=0.0048 Score=54.49 Aligned_cols=145 Identities=14% Similarity=0.081 Sum_probs=96.4
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEECCEEEEEecCCCCCCCCeEEEEeCCCCceeecC
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDV 366 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 366 (482)
++.||+..|..+ .+..+|+.+.+-...- ++..-.+.+++..+++||+....+ +.+++||+.+.+-..-
T Consensus 64 ~~~Ly~stG~~g-----~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~-----~~v~V~D~~Tl~~~~t- 131 (268)
T 3nok_A 64 QGHFFESTGHQG-----TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTE-----GLLFTWSGMPPQRERT- 131 (268)
T ss_dssp TTEEEEEETTTT-----EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSS-----CEEEEEETTTTEEEEE-
T ss_pred CCEEEEEcCCCC-----EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccC-----CEEEEEECCcCcEEEE-
Confidence 689999888542 2889999998764433 554445566788899999986533 5799999998875422
Q ss_pred CCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceee-cC--CCCCCccc-eEEEEECCEEEEEcCCCCCC
Q psy11333 367 APTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSR-VA--PMTTRRLG-VAVAVLGGFLYAIGGSDGQS 442 (482)
Q Consensus 367 ~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~--~~~~~r~~-~~~~~~~~~i~v~GG~~~~~ 442 (482)
.+.+-.+.+++.-+++||+.-| .+.++.+||.+.+-.. +. .-+.+... -.+...+|+||+---.
T Consensus 132 --i~~~~eGwGLt~Dg~~L~vSdG------s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~---- 199 (268)
T 3nok_A 132 --TRYSGEGWGLCYWNGKLVRSDG------GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWH---- 199 (268)
T ss_dssp --EECSSCCCCEEEETTEEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETT----
T ss_pred --EeCCCceeEEecCCCEEEEECC------CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECC----
Confidence 1222334577777889999865 3579999999876433 21 22222211 2234458999964322
Q ss_pred CCCeEEEEeCCCCc
Q psy11333 443 PLNTVERFDPKLNR 456 (482)
Q Consensus 443 ~~~~~~~y~~~~~~ 456 (482)
.++|.+.||++.+
T Consensus 200 -s~~I~vIDp~TG~ 212 (268)
T 3nok_A 200 -SSDVLEIDPATGT 212 (268)
T ss_dssp -CSEEEEECTTTCB
T ss_pred -CCeEEEEeCCCCc
Confidence 3689999998875
No 54
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.42 E-value=0.016 Score=53.73 Aligned_cols=153 Identities=11% Similarity=0.066 Sum_probs=92.1
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCC----CCCceeEEEECCEEEEEecCCCCCCCCeEEEEeCCCCc
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSK----RRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQ 361 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~----~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 361 (482)
.++++|+.... ...+.++|+.+.+-...-+... .....+++..++++|+..- . ..+.+.++|+.+++
T Consensus 93 ~~g~lyv~~~~-----~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~-~---~~~~v~viD~~t~~ 163 (328)
T 3dsm_A 93 SDEKAYVTQIW-----DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCW-S---YQNRILKIDTETDK 163 (328)
T ss_dssp ETTEEEEEEBS-----CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEEC-T---TCCEEEEEETTTTE
T ss_pred CCCeEEEEECC-----CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcC-C---CCCEEEEEECCCCe
Confidence 46788888642 2579999999887542211111 0023355557899999852 0 13579999999988
Q ss_pred eeecCCCCCCcccceeEE-EECCEEEEEeccCCCc-----ccCeEEEEeCCCCceeecCCCCCCccceEEEEE--CCEEE
Q psy11333 362 WSCDVAPTTSCRTSVGVA-VLDGFLYAVGGQDGVQ-----CLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL--GGFLY 433 (482)
Q Consensus 362 W~~~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~-----~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~ 433 (482)
.....+....| .+++ .-+|++|+........ ....+.++|+.+.+....-..+.......++.. ++.+|
T Consensus 164 ~~~~i~~g~~p---~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~ly 240 (328)
T 3dsm_A 164 VVDELTIGIQP---TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLY 240 (328)
T ss_dssp EEEEEECSSCB---CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEE
T ss_pred EEEEEEcCCCc---cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEE
Confidence 65430211122 2233 3368988886322110 136899999998876544344433334445555 56788
Q ss_pred EEcCCCCCCCCCeEEEEeCCCCcee
Q psy11333 434 AIGGSDGQSPLNTVERFDPKLNRWT 458 (482)
Q Consensus 434 v~GG~~~~~~~~~~~~y~~~~~~W~ 458 (482)
+..+ .+++||+++.+..
T Consensus 241 v~~~--------~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 241 WINN--------DIWRMPVEADRVP 257 (328)
T ss_dssp EESS--------SEEEEETTCSSCC
T ss_pred EEcc--------EEEEEECCCCcee
Confidence 8754 6899999887653
No 55
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.41 E-value=0.019 Score=53.16 Aligned_cols=154 Identities=9% Similarity=0.024 Sum_probs=94.2
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCCe-eeccCCCCCCCceeEEE-ECCEEEEEecCCCCCCCCeEEEEeCCCCcee
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSDW-KIVAPMSKRRCGVGVAV-LNDLLYAVGGHDGQSYLNSIERYDPQTNQWS 363 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W-~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 363 (482)
.++++|+.... ...+..+|+.+.+- ..++... ....++. -++++|+.... .+.+.++|+.+++-.
T Consensus 52 ~~~~lyv~~~~-----~~~v~viD~~t~~~~~~i~~~~---~p~~i~~~~~g~lyv~~~~-----~~~v~~iD~~t~~~~ 118 (328)
T 3dsm_A 52 RDGIGWIVVNN-----SHVIFAIDINTFKEVGRITGFT---SPRYIHFLSDEKAYVTQIW-----DYRIFIINPKTYEIT 118 (328)
T ss_dssp ETTEEEEEEGG-----GTEEEEEETTTCCEEEEEECCS---SEEEEEEEETTEEEEEEBS-----CSEEEEEETTTTEEE
T ss_pred ECCEEEEEEcC-----CCEEEEEECcccEEEEEcCCCC---CCcEEEEeCCCeEEEEECC-----CCeEEEEECCCCeEE
Confidence 46888888652 25789999998876 3343332 2335555 68899998753 257999999998754
Q ss_pred ecCCCCCC----cccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEE-ECCEEEEEcCC
Q psy11333 364 CDVAPTTS----CRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAV-LGGFLYAIGGS 438 (482)
Q Consensus 364 ~~~~~~~~----~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~i~v~GG~ 438 (482)
.. -+.+. .....+++..++++|+..-. ..+.+.++|+.+.+....-+. +.....++. -+|++|+....
T Consensus 119 ~~-i~~g~~~~~~~~p~~i~~~~~~lyv~~~~----~~~~v~viD~~t~~~~~~i~~--g~~p~~i~~~~dG~l~v~~~~ 191 (328)
T 3dsm_A 119 GY-IECPDMDMESGSTEQMVQYGKYVYVNCWS----YQNRILKIDTETDKVVDELTI--GIQPTSLVMDKYNKMWTITDG 191 (328)
T ss_dssp EE-EECTTCCTTTCBCCCEEEETTEEEEEECT----TCCEEEEEETTTTEEEEEEEC--SSCBCCCEECTTSEEEEEBCC
T ss_pred EE-EEcCCccccCCCcceEEEECCEEEEEcCC----CCCEEEEEECCCCeEEEEEEc--CCCccceEEcCCCCEEEEECC
Confidence 22 11111 00223455589999998521 135799999998876443221 111122333 36888888643
Q ss_pred CCCCC-----CCeEEEEeCCCCceee
Q psy11333 439 DGQSP-----LNTVERFDPKLNRWTA 459 (482)
Q Consensus 439 ~~~~~-----~~~~~~y~~~~~~W~~ 459 (482)
+.... ...++++|+++.+...
T Consensus 192 ~~~~~~~~~~~~~v~~id~~t~~v~~ 217 (328)
T 3dsm_A 192 GYEGSPYGYEAPSLYRIDAETFTVEK 217 (328)
T ss_dssp BCTTCSSCBCCCEEEEEETTTTEEEE
T ss_pred CccCCccccCCceEEEEECCCCeEEE
Confidence 21111 3689999999887653
No 56
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=97.37 E-value=6e-06 Score=74.17 Aligned_cols=134 Identities=12% Similarity=0.164 Sum_probs=93.7
Q ss_pred CHHHHHHhcCCCCcCccceEEE-ccCCHHHHHHHHHHhhcCee-eeccccHhhHHHHhcccChhhHHHHHHHHHhccCCC
Q psy11333 60 SPYFRAMFTGELAESRQAEVTI-RDIDDVAMDNLIEFCYTSHI-TVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDP 137 (482)
Q Consensus 60 S~~F~~~~~~~~~e~~~~~i~l-~~~~~~~~~~~l~~~y~~~~-~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i~~~~~~ 137 (482)
..+++.+|+|....+..+...+ ...+...+..+.+.|..... .++.+||..++.+|+.+++++|.+.|.+++..++..
T Consensus 86 ~~ll~~~Yt~~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~ 165 (256)
T 3hve_A 86 REILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHVHYLATEYLETHFRD 165 (256)
T ss_dssp HHHHHHHHHSCCCCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhccCCCCcccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 3466788999877665554333 33345556677777766532 678899999999999999999999999999887642
Q ss_pred C---C---------HHHHHHHHhhC---CCHHHHHHHHHHHH-------HhHHHHhcccccccCCHHHHhHhhcCCCcc
Q psy11333 138 S---N---------CLGIRAFADTH---SCRDLLRIADKFTQ-------HNFQEVMESEEFLILPVAQLVDIISSDELN 194 (482)
Q Consensus 138 ~---~---------~~~~~~~~~~~---~~~~L~~~~~~~i~-------~~~~~l~~~~~f~~l~~~~l~~il~~~~l~ 194 (482)
. . ...++. .+.. +..++++++.+|+. .++..+++..+|..++.+.|.+.++.+.+.
T Consensus 166 v~~~~~f~~L~~~~l~~lL~-~d~L~v~~E~~v~~av~~W~~~~~~~R~~~~~~ll~~VRf~~l~~~~l~~~v~~~~l~ 243 (256)
T 3hve_A 166 VSSTEEFLELSPQKLKEVIS-LEKLNVGNERYVFEAVIRWIAHDTEIRKVHMKDVMSALWVSGLDSSYLREQMLNEPLV 243 (256)
T ss_dssp HTTCHHHHSSCHHHHHHHHH-CC-------CTTHHHHTTTCCC--CCSTTTHHHHHHHHHHHTTCC-CHHHHHHTSTTH
T ss_pred HhCCcchhcCCHHHHHHHHc-cCCCCCCCHHHHHHHHHHHHHcCHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhcChHH
Confidence 1 0 111111 1112 23457888999985 457889999999999999999999887773
No 57
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.36 E-value=0.0016 Score=57.53 Aligned_cols=124 Identities=14% Similarity=0.122 Sum_probs=84.5
Q ss_pred eeccCCCCCCCc--eeEEEECCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEECCEEEEEeccCC
Q psy11333 316 KIVAPMSKRRCG--VGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDG 393 (482)
Q Consensus 316 ~~~~~~~~~~~~--~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~ 393 (482)
+.+...|..+.. .+....++.||+..|..+ .+.+.++|+++++=..- .+++..-+..+++..+++||+....
T Consensus 32 ~vv~~~phd~~~ftqGL~~~~~~LyestG~~g---~S~v~~vD~~Tgkv~~~-~~l~~~~FgeGit~~g~~ly~ltw~-- 105 (262)
T 3nol_A 32 QIVHSYPHDTKAFTEGFFYRNGYFYESTGLNG---RSSIRKVDIESGKTLQQ-IELGKRYFGEGISDWKDKIVGLTWK-- 105 (262)
T ss_dssp EEEEEEECCTTCEEEEEEEETTEEEEEEEETT---EEEEEEECTTTCCEEEE-EECCTTCCEEEEEEETTEEEEEESS--
T ss_pred EEEEEecCCCCcccceEEEECCEEEEECCCCC---CceEEEEECCCCcEEEE-EecCCccceeEEEEeCCEEEEEEee--
Confidence 334444444444 455666899999998654 24789999999986544 3455444556778889999999643
Q ss_pred CcccCeEEEEeCCCCceeecCCCCCCccceEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 394 VQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 394 ~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
.+.+++||+.+.+- +...+.+-.+.+++.-++++|+.-|. +.++.+||++.+
T Consensus 106 ---~~~v~v~D~~t~~~--~~ti~~~~eG~glt~dg~~L~~SdGs------~~i~~iDp~T~~ 157 (262)
T 3nol_A 106 ---NGLGFVWNIRNLRQ--VRSFNYDGEGWGLTHNDQYLIMSDGT------PVLRFLDPESLT 157 (262)
T ss_dssp ---SSEEEEEETTTCCE--EEEEECSSCCCCEEECSSCEEECCSS------SEEEEECTTTCS
T ss_pred ---CCEEEEEECccCcE--EEEEECCCCceEEecCCCEEEEECCC------CeEEEEcCCCCe
Confidence 36799999987654 33333344666666667778887652 579999998764
No 58
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.24 E-value=0.031 Score=49.74 Aligned_cols=148 Identities=22% Similarity=0.182 Sum_probs=94.4
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEECCEEEEEecCCCCCCCCeEEEEeCCCCcee-ec
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWS-CD 365 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~ 365 (482)
++.||+..|.. ..+.+..+|+.+++-...-+++....+.+.+..++.||+..-. .+.+.+||+.+.+=. ++
T Consensus 31 dg~Lyvstg~~---~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~-----~~~v~viD~~t~~v~~~i 102 (266)
T 2iwa_A 31 NDTLFESTGLY---GRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL-----KNIGFIYDRRTLSNIKNF 102 (266)
T ss_dssp TTEEEEEECST---TTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETT-----CSEEEEEETTTTEEEEEE
T ss_pred CCeEEEECCCC---CCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEec-----CCEEEEEECCCCcEEEEE
Confidence 47999987632 2257999999999865443444444556777789999998643 357999999987532 23
Q ss_pred CCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceee-cC--CCCCCcc-ceEEEEECCEEEEEcCCCCC
Q psy11333 366 VAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSR-VA--PMTTRRL-GVAVAVLGGFLYAIGGSDGQ 441 (482)
Q Consensus 366 ~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~--~~~~~r~-~~~~~~~~~~i~v~GG~~~~ 441 (482)
+.+++ .+.+++.-++++|+..| .+.+..+|+.+.+-.. ++ ..+.|.. -..+...++++|+--..
T Consensus 103 ~~g~~---~g~glt~Dg~~l~vs~g------s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~--- 170 (266)
T 2iwa_A 103 THQMK---DGWGLATDGKILYGSDG------TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQ--- 170 (266)
T ss_dssp ECCSS---SCCEEEECSSSEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETT---
T ss_pred ECCCC---CeEEEEECCCEEEEECC------CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCC---
Confidence 11112 23445555778998864 3679999998865322 22 1122221 12334448899977543
Q ss_pred CCCCeEEEEeCCCCc
Q psy11333 442 SPLNTVERFDPKLNR 456 (482)
Q Consensus 442 ~~~~~~~~y~~~~~~ 456 (482)
.+++.+.|+.+.+
T Consensus 171 --~~~V~vID~~tg~ 183 (266)
T 2iwa_A 171 --TDCIARISAKDGT 183 (266)
T ss_dssp --SSEEEEEETTTCC
T ss_pred --CCeEEEEECCCCc
Confidence 2589999998775
No 59
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.97 E-value=0.00053 Score=51.70 Aligned_cols=66 Identities=12% Similarity=0.005 Sum_probs=48.5
Q ss_pred eeeeccccHhhHHHHhcccChhhHHHHHHHHHhccCCCC---C---------HHHHHHHHhhCCCHHHHHHHHHHHHHh
Q psy11333 100 HITVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDPS---N---------CLGIRAFADTHSCRDLLRIADKFTQHN 166 (482)
Q Consensus 100 ~~~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i~~~~~~~---~---------~~~~~~~~~~~~~~~L~~~~~~~i~~~ 166 (482)
...++++||.+++.+|+.|++++|.+.|.+||..++... . ...++.. +-.+...+++++++|+..+
T Consensus 5 ~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~~L~~lL~s-dv~~E~~vf~av~~Wv~~d 82 (105)
T 2eqx_A 5 SSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHRLLTDIISD-GVPCSQNPTEAIEAWINFN 82 (105)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHHHHHHHHHT-CEETTSCHHHHHHHHHHTT
T ss_pred hccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCHHHHHHHHcC-CCCCHHHHHHHHHHHHHcC
Confidence 346899999999999999999999999999999988531 1 1112211 2223345899999998644
No 60
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.96 E-value=0.0086 Score=52.86 Aligned_cols=109 Identities=13% Similarity=0.103 Sum_probs=78.6
Q ss_pred eeEEEECCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCC
Q psy11333 328 VGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKE 407 (482)
Q Consensus 328 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~ 407 (482)
.+....++.||+..|.++ .+.++|+++++=..- . ++..-+..+++..+++||+.... .+.+++||+.+
T Consensus 58 qGL~~~~~~Ly~stG~~g-----~v~~iD~~Tgkv~~~-~-l~~~~FgeGit~~g~~Ly~ltw~-----~~~v~V~D~~T 125 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQG-----TLRQLSLESAQPVWM-E-RLGNIFAEGLASDGERLYQLTWT-----EGLLFTWSGMP 125 (268)
T ss_dssp EEEEEETTEEEEEETTTT-----EEEECCSSCSSCSEE-E-ECTTCCEEEEEECSSCEEEEESS-----SCEEEEEETTT
T ss_pred ceEEEECCEEEEEcCCCC-----EEEEEECCCCcEEeE-E-CCCCcceeEEEEeCCEEEEEEcc-----CCEEEEEECCc
Confidence 466667999999999654 389999999986544 3 44333455678889999998643 35799999987
Q ss_pred CceeecCCCCCCccceEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 408 NKWSRVAPMTTRRLGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 408 ~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
.+- +...+.+..+.+++.-+++||+.-|. +.+..+||++.+
T Consensus 126 l~~--~~ti~~~~eGwGLt~Dg~~L~vSdGs------~~l~~iDp~T~~ 166 (268)
T 3nok_A 126 PQR--ERTTRYSGEGWGLCYWNGKLVRSDGG------TMLTFHEPDGFA 166 (268)
T ss_dssp TEE--EEEEECSSCCCCEEEETTEEEEECSS------SEEEEECTTTCC
T ss_pred CcE--EEEEeCCCceeEEecCCCEEEEECCC------CEEEEEcCCCCe
Confidence 654 33333344566777778899998763 579999998765
No 61
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=96.90 E-value=0.00097 Score=55.74 Aligned_cols=92 Identities=13% Similarity=0.249 Sum_probs=71.3
Q ss_pred EEEEeCCeEEeceeEEeeccC-HHHHHHhcCCCCc----CccceEEEccCCHHHHHHHHHHhhcCeeeeccccH-hhHHH
Q psy11333 40 VVLNVGARKIFAHRVVLSACS-PYFRAMFTGELAE----SRQAEVTIRDIDDVAMDNLIEFCYTSHITVEESNV-QTLLP 113 (482)
Q Consensus 40 v~i~~~~~~~~~hk~iL~~~S-~~F~~~~~~~~~e----~~~~~i~l~~~~~~~~~~~l~~~y~~~~~~~~~~~-~~ll~ 113 (482)
|.|.|+|..|...+..|.... .+|..|+++.... ...+.+-| |-++..|..||+|+.+|.+.++.+-+ ..+++
T Consensus 14 V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~~~~~~~l~e 92 (202)
T 3drx_A 14 VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEEGVLE 92 (202)
T ss_dssp EEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCTTSCHHHHHH
T ss_pred EEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccCCCCCCCHHHHHH
Confidence 678899999999999998764 4888998765321 12233444 67999999999999999887765543 56888
Q ss_pred HhcccChhhHHHHHHHHHh
Q psy11333 114 AACLLQLVEIQDICCEFLK 132 (482)
Q Consensus 114 ~a~~~~~~~L~~~~~~~i~ 132 (482)
-|++|++++|.+.|.+.|.
T Consensus 93 EA~FygL~~Lv~~l~~~i~ 111 (202)
T 3drx_A 93 EAEFYNITSLIKLVKDKIR 111 (202)
T ss_dssp HHHHTTCHHHHHHHHHHHH
T ss_pred HHHHCCcHHHHHHHHHHHH
Confidence 8999999999988887775
No 62
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.87 E-value=0.12 Score=48.57 Aligned_cols=150 Identities=14% Similarity=0.198 Sum_probs=88.2
Q ss_pred CCCCCcEEEEeccccCCCCCceeEEEeCCCCC--eeeccCCC-------CCCCceeEEEECCEEEEEecCCCCCCCCeEE
Q psy11333 283 PSRRGEVLFAVGGWCSGDAISSVERYDPQSSD--WKIVAPMS-------KRRCGVGVAVLNDLLYAVGGHDGQSYLNSIE 353 (482)
Q Consensus 283 ~~~~~~~l~~~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~-------~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 353 (482)
.++.++.||+.... ..+++||+.+.+ |+.-.... ......+.++.++.||+... ...++
T Consensus 49 p~v~~~~v~~~~~~------g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------~g~l~ 116 (376)
T 3q7m_A 49 PALADNVVYAADRA------GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE------KAQVY 116 (376)
T ss_dssp CEEETTEEEEECTT------SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET------TSEEE
T ss_pred cEEECCEEEEEcCC------CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC------CCEEE
Confidence 34457889887541 378999997764 76433211 11222334556888988543 14699
Q ss_pred EEeCCCCc--eeecCCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCc--eeecCCCCC--CccceEEEE
Q psy11333 354 RYDPQTNQ--WSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENK--WSRVAPMTT--RRLGVAVAV 427 (482)
Q Consensus 354 ~yd~~~~~--W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~--~r~~~~~~~ 427 (482)
++|+.+++ |+.- .+. . .....++.++.+|+..+ ...+.+||+.+.+ |..-...+. .+.....+.
T Consensus 117 a~d~~tG~~~W~~~-~~~--~-~~~~p~~~~~~v~v~~~------~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~ 186 (376)
T 3q7m_A 117 ALNTSDGTVAWQTK-VAG--E-ALSRPVVSDGLVLIHTS------NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT 186 (376)
T ss_dssp EEETTTCCEEEEEE-CSS--C-CCSCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCC-----CCCCCCEE
T ss_pred EEECCCCCEEEEEe-CCC--c-eEcCCEEECCEEEEEcC------CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE
Confidence 99998775 7754 211 1 12223456888887543 1368999987764 876543221 122234455
Q ss_pred ECCEEEEEcCCCCCCCCCeEEEEeCCCC--ceeec
Q psy11333 428 LGGFLYAIGGSDGQSPLNTVERFDPKLN--RWTAM 460 (482)
Q Consensus 428 ~~~~i~v~GG~~~~~~~~~~~~y~~~~~--~W~~~ 460 (482)
.++.+|+- ..+ ..+..||+++. .|+.-
T Consensus 187 ~~~~v~~g-~~~-----g~l~~~d~~tG~~~w~~~ 215 (376)
T 3q7m_A 187 AFGAAVVG-GDN-----GRVSAVLMEQGQMIWQQR 215 (376)
T ss_dssp ETTEEEEC-CTT-----TEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEE-cCC-----CEEEEEECCCCcEEEEEe
Confidence 57877763 322 46899998765 47653
No 63
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.83 E-value=0.027 Score=50.15 Aligned_cols=124 Identities=20% Similarity=0.232 Sum_probs=80.0
Q ss_pred eeccCCCCCCC--ceeEEEEC-CEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEECCEEEEEeccC
Q psy11333 316 KIVAPMSKRRC--GVGVAVLN-DLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQD 392 (482)
Q Consensus 316 ~~~~~~~~~~~--~~~~~~~~-~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~ 392 (482)
+.+...|.+.. .++++..+ +.||+..|..+ .+.+.++|+.+++=... -+++......+++..+++||+..-.
T Consensus 10 ~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~---~s~v~~iD~~tg~v~~~-i~l~~~~fgeGi~~~g~~lyv~t~~- 84 (266)
T 2iwa_A 10 EVLNEFPHDPYAFTQGLVYAENDTLFESTGLYG---RSSVRQVALQTGKVENI-HKMDDSYFGEGLTLLNEKLYQVVWL- 84 (266)
T ss_dssp EEEEEEECCTTCCEEEEEECSTTEEEEEECSTT---TCEEEEEETTTCCEEEE-EECCTTCCEEEEEEETTEEEEEETT-
T ss_pred eEEEEEECCCCCCcccEEEeCCCeEEEECCCCC---CCEEEEEECCCCCEEEE-EecCCCcceEEEEEeCCEEEEEEec-
Confidence 34444444433 36777765 89999877432 36799999999985543 3344333445677789999999642
Q ss_pred CCcccCeEEEEeCCCCceeecCCCCCC-ccceEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 393 GVQCLNHVERYDPKENKWSRVAPMTTR-RLGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 393 ~~~~~~~~~~yd~~~~~W~~~~~~~~~-r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
.+.+.+||+.+.+= +..++.+ ..+.+++.-++++|+.-| .+.+..+|+++.+
T Consensus 85 ----~~~v~viD~~t~~v--~~~i~~g~~~g~glt~Dg~~l~vs~g------s~~l~viD~~t~~ 137 (266)
T 2iwa_A 85 ----KNIGFIYDRRTLSN--IKNFTHQMKDGWGLATDGKILYGSDG------TSILYEIDPHTFK 137 (266)
T ss_dssp ----CSEEEEEETTTTEE--EEEEECCSSSCCEEEECSSSEEEECS------SSEEEEECTTTCC
T ss_pred ----CCEEEEEECCCCcE--EEEEECCCCCeEEEEECCCEEEEECC------CCeEEEEECCCCc
Confidence 35799999986542 3333322 334455544668998754 2589999998764
No 64
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.74 E-value=0.16 Score=47.59 Aligned_cols=142 Identities=14% Similarity=0.189 Sum_probs=84.9
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCC--eeeccCCCCCC--------CceeEEEECCEEEEEecCCCCCCCCeEEEE
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSD--WKIVAPMSKRR--------CGVGVAVLNDLLYAVGGHDGQSYLNSIERY 355 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~~--------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~y 355 (482)
.++.+|+... ...+..+|+.+.+ |+.-...+... .....++.++.+|+.+. + ..+.++
T Consensus 187 ~~~~v~~g~~------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~-~-----g~l~~~ 254 (376)
T 3q7m_A 187 AFGAAVVGGD------NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY-N-----GNLTAL 254 (376)
T ss_dssp ETTEEEECCT------TTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT-T-----SCEEEE
T ss_pred ECCEEEEEcC------CCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec-C-----cEEEEE
Confidence 3667666322 1368899998764 76433222111 22333456888888652 1 358999
Q ss_pred eCCCCc--eeecCCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCc--eeecCCCCCCccceEEEEECCE
Q psy11333 356 DPQTNQ--WSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENK--WSRVAPMTTRRLGVAVAVLGGF 431 (482)
Q Consensus 356 d~~~~~--W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~r~~~~~~~~~~~ 431 (482)
|+.+.+ |+.- .+ . ..+.+..++.+|+.... ..+.+||+.+.+ |..-. .+ .+.....+..++.
T Consensus 255 d~~tG~~~w~~~-~~--~---~~~~~~~~~~l~~~~~~------g~l~~~d~~tG~~~w~~~~-~~-~~~~~~~~~~~~~ 320 (376)
T 3q7m_A 255 DLRSGQIMWKRE-LG--S---VNDFIVDGNRIYLVDQN------DRVMALTIDGGVTLWTQSD-LL-HRLLTSPVLYNGN 320 (376)
T ss_dssp ETTTCCEEEEEC-CC--C---EEEEEEETTEEEEEETT------CCEEEEETTTCCEEEEECT-TT-TSCCCCCEEETTE
T ss_pred ECCCCcEEeecc-CC--C---CCCceEECCEEEEEcCC------CeEEEEECCCCcEEEeecc-cC-CCcccCCEEECCE
Confidence 998775 7754 21 1 23456678999987532 358899988764 76531 11 2223344556888
Q ss_pred EEEEcCCCCCCCCCeEEEEeCCCCc--eee
Q psy11333 432 LYAIGGSDGQSPLNTVERFDPKLNR--WTA 459 (482)
Q Consensus 432 i~v~GG~~~~~~~~~~~~y~~~~~~--W~~ 459 (482)
||+... + ..+++||+++.+ |+.
T Consensus 321 l~v~~~-~-----g~l~~~d~~tG~~~~~~ 344 (376)
T 3q7m_A 321 LVVGDS-E-----GYLHWINVEDGRFVAQQ 344 (376)
T ss_dssp EEEECT-T-----SEEEEEETTTCCEEEEE
T ss_pred EEEEeC-C-----CeEEEEECCCCcEEEEE
Confidence 888643 2 469999988775 654
No 65
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.05 E-value=0.047 Score=51.52 Aligned_cols=145 Identities=19% Similarity=0.267 Sum_probs=81.2
Q ss_pred cEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CC-EEEEEecCCCCCCCCeEEEEeCCCCceeec
Q psy11333 288 EVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-ND-LLYAVGGHDGQSYLNSIERYDPQTNQWSCD 365 (482)
Q Consensus 288 ~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 365 (482)
+.+|+.|+.. ..+..+|..+++-...-. ....-.+++.. ++ .||+.|+.+ ..+.+||+.+++....
T Consensus 2 ~~l~vs~~~d-----~~v~v~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~d-----~~i~v~d~~~~~~~~~ 69 (391)
T 1l0q_A 2 TFAYIANSES-----DNISVIDVTSNKVTATIP--VGSNPMGAVISPDGTKVYVANAHS-----NDVSIIDTATNNVIAT 69 (391)
T ss_dssp EEEEEEETTT-----TEEEEEETTTTEEEEEEE--CSSSEEEEEECTTSSEEEEEEGGG-----TEEEEEETTTTEEEEE
T ss_pred CEEEEEcCCC-----CEEEEEECCCCeEEEEee--cCCCcceEEECCCCCEEEEECCCC-----CeEEEEECCCCeEEEE
Confidence 4677777632 468899998876533221 11122333333 44 577777654 4799999998876543
Q ss_pred CCCCCCcccceeEEEE-CC-EEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CC-EEEEEcCCCCC
Q psy11333 366 VAPTTSCRTSVGVAVL-DG-FLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GG-FLYAIGGSDGQ 441 (482)
Q Consensus 366 ~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~i~v~GG~~~~ 441 (482)
-+... .-.+++.. ++ .||+.|..+ ..+..||+.+.+....... ......++.. ++ .+|+.++.+
T Consensus 70 -~~~~~--~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~-- 137 (391)
T 1l0q_A 70 -VPAGS--SPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSNTVAGTVKT--GKSPLGLALSPDGKKLYVTNNGD-- 137 (391)
T ss_dssp -EECSS--SEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEETTT--
T ss_pred -EECCC--CccceEECCCCCEEEEEECCC-----CEEEEEECCCCeEEEEEeC--CCCcceEEECCCCCEEEEEeCCC--
Confidence 12222 22233332 34 466665432 4689999998765443322 2222333333 34 577777654
Q ss_pred CCCCeEEEEeCCCCceee
Q psy11333 442 SPLNTVERFDPKLNRWTA 459 (482)
Q Consensus 442 ~~~~~~~~y~~~~~~W~~ 459 (482)
+.+.+||+.+.+...
T Consensus 138 ---~~v~~~d~~~~~~~~ 152 (391)
T 1l0q_A 138 ---KTVSVINTVTKAVIN 152 (391)
T ss_dssp ---TEEEEEETTTTEEEE
T ss_pred ---CEEEEEECCCCcEEE
Confidence 478999987765433
No 66
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=95.97 E-value=0.77 Score=40.83 Aligned_cols=151 Identities=9% Similarity=0.054 Sum_probs=82.4
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
.++.+|+.+.. ....+..||+..+........ ......++++- ++.+|+....+ ..+.+||+.......
T Consensus 87 ~~g~l~v~~~~----~~~~i~~~d~~g~~~~~~~~~-~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~g~~~~~ 156 (286)
T 1q7f_A 87 NSGDIIVTERS----PTHQIQIYNQYGQFVRKFGAT-ILQHPRGVTVDNKGRIIVVECKV-----MRVIIFDQNGNVLHK 156 (286)
T ss_dssp TTTEEEEEECG----GGCEEEEECTTSCEEEEECTT-TCSCEEEEEECTTSCEEEEETTT-----TEEEEECTTSCEEEE
T ss_pred CCCeEEEEcCC----CCCEEEEECCCCcEEEEecCc-cCCCceEEEEeCCCCEEEEECCC-----CEEEEEcCCCCEEEE
Confidence 46788888632 124688899665544333221 11122344442 67899876432 479999987665444
Q ss_pred cCCCCCCcccceeEEEE-CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCEEEEEcCCCCCC
Q psy11333 365 DVAPTTSCRTSVGVAVL-DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGFLYAIGGSDGQS 442 (482)
Q Consensus 365 ~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~ 442 (482)
+ ..........+++.. +|++|+.+.. ...+.+||+.......+..-.......+++.- +|.+|+....++
T Consensus 157 ~-~~~~~~~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~-- 228 (286)
T 1q7f_A 157 F-GCSKHLEFPNGVVVNDKQEIFISDNR-----AHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNN-- 228 (286)
T ss_dssp E-ECTTTCSSEEEEEECSSSEEEEEEGG-----GTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSS--
T ss_pred e-CCCCccCCcEEEEECCCCCEEEEECC-----CCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCC--
Confidence 4 211111112233332 5889988643 35789999876544444321111112233332 678998875431
Q ss_pred CCCeEEEEeCCCCc
Q psy11333 443 PLNTVERFDPKLNR 456 (482)
Q Consensus 443 ~~~~~~~y~~~~~~ 456 (482)
..+.+||++...
T Consensus 229 --~~i~~~~~~g~~ 240 (286)
T 1q7f_A 229 --FNLTIFTQDGQL 240 (286)
T ss_dssp --CEEEEECTTSCE
T ss_pred --EEEEEECCCCCE
Confidence 278999976554
No 67
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.92 E-value=0.75 Score=40.37 Aligned_cols=147 Identities=16% Similarity=0.133 Sum_probs=79.2
Q ss_pred CCcEEEE-eccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCcee
Q psy11333 286 RGEVLFA-VGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWS 363 (482)
Q Consensus 286 ~~~~l~~-~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 363 (482)
.++.+|+ ... ....+..+|+.+.......... .....+++.- ++.||+... + ..+.+||+.+....
T Consensus 33 ~~g~l~v~~~~-----~~~~i~~~~~~~~~~~~~~~~~-~~~p~~i~~~~~g~l~v~~~-~-----~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 33 SAGNVYVTSEG-----MYGRVVKLATGSTGTTVLPFNG-LYQPQGLAVDGAGTVYVTDF-N-----NRVVTLAAGSNNQT 100 (270)
T ss_dssp TTCCEEEEECS-----SSCEEEEECC-----EECCCCS-CCSCCCEEECTTCCEEEEET-T-----TEEEEECTTCSCCE
T ss_pred CCCCEEEEccC-----CCCcEEEecCCCcccceEeeCC-cCCcceeEECCCCCEEEEcC-C-----CEEEEEeCCCceEe
Confidence 4567888 532 1246888998877654433211 1222344443 678998765 2 46899999887655
Q ss_pred ecCCCCCCcccceeEEEE-CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCEEEEEcCCCCC
Q psy11333 364 CDVAPTTSCRTSVGVAVL-DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGFLYAIGGSDGQ 441 (482)
Q Consensus 364 ~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~ 441 (482)
.. .... .....+++.. +|++|+.... ...+.+||..+.......... .....+++.. +|++|+....+
T Consensus 101 ~~-~~~~-~~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~~~~~-~~~p~~i~~~~~g~l~v~~~~~-- 170 (270)
T 1rwi_B 101 VL-PFDG-LNYPEGLAVDTQGAVYVADRG-----NNRVVKLAAGSKTQTVLPFTG-LNDPDGVAVDNSGNVYVTDTDN-- 170 (270)
T ss_dssp EC-CCCS-CSSEEEEEECTTCCEEEEEGG-----GTEEEEECTTCCSCEECCCCS-CCSCCCEEECTTCCEEEEEGGG--
T ss_pred ee-ecCC-cCCCcceEECCCCCEEEEECC-----CCEEEEEECCCceeEeecccc-CCCceeEEEeCCCCEEEEECCC--
Confidence 44 2111 1122344443 6789988643 246888887765544332111 1112233333 67888876432
Q ss_pred CCCCeEEEEeCCCCce
Q psy11333 442 SPLNTVERFDPKLNRW 457 (482)
Q Consensus 442 ~~~~~~~~y~~~~~~W 457 (482)
..+.+||+.+..-
T Consensus 171 ---~~i~~~~~~~~~~ 183 (270)
T 1rwi_B 171 ---NRVVKLEAESNNQ 183 (270)
T ss_dssp ---TEEEEECTTTCCE
T ss_pred ---CEEEEEecCCCce
Confidence 4688998876653
No 68
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.82 E-value=0.086 Score=49.63 Aligned_cols=144 Identities=19% Similarity=0.263 Sum_probs=80.7
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CC-EEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-ND-LLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
+..+|+.|+.. ..+..+|+.+.+....-... ..-.+++.. ++ .||+.|..+ ..+.+||+.+++...
T Consensus 43 g~~l~~~~~~d-----~~i~v~d~~~~~~~~~~~~~--~~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~~~~~ 110 (391)
T 1l0q_A 43 GTKVYVANAHS-----NDVSIIDTATNNVIATVPAG--SSPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSNTVAG 110 (391)
T ss_dssp SSEEEEEEGGG-----TEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEE
T ss_pred CCEEEEECCCC-----CeEEEEECCCCeEEEEEECC--CCccceEECCCCCEEEEEECCC-----CEEEEEECCCCeEEE
Confidence 34677776532 46889999887654322222 222333333 34 566666432 479999999887654
Q ss_pred cCCCCCCcccceeEEEE-CC-EEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CC-EEEEEcCCCC
Q psy11333 365 DVAPTTSCRTSVGVAVL-DG-FLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GG-FLYAIGGSDG 440 (482)
Q Consensus 365 ~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~i~v~GG~~~ 440 (482)
. ... .....+++.. ++ .+|+.++.+ ..+..||+.+.+....-... .....++.. ++ .+|+.++.+
T Consensus 111 ~-~~~--~~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~dg~~l~~~~~~~- 179 (391)
T 1l0q_A 111 T-VKT--GKSPLGLALSPDGKKLYVTNNGD-----KTVSVINTVTKAVINTVSVG--RSPKGIAVTPDGTKVYVANFDS- 179 (391)
T ss_dssp E-EEC--SSSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECC--SSEEEEEECTTSSEEEEEETTT-
T ss_pred E-EeC--CCCcceEEECCCCCEEEEEeCCC-----CEEEEEECCCCcEEEEEecC--CCcceEEECCCCCEEEEEeCCC-
Confidence 3 111 1112233332 34 577776543 46889999887664433222 112233333 34 677776654
Q ss_pred CCCCCeEEEEeCCCCce
Q psy11333 441 QSPLNTVERFDPKLNRW 457 (482)
Q Consensus 441 ~~~~~~~~~y~~~~~~W 457 (482)
+.+.+||+.+.+.
T Consensus 180 ----~~v~~~d~~~~~~ 192 (391)
T 1l0q_A 180 ----MSISVIDTVTNSV 192 (391)
T ss_dssp ----TEEEEEETTTTEE
T ss_pred ----CEEEEEECCCCeE
Confidence 4689999877654
No 69
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.75 E-value=0.17 Score=47.10 Aligned_cols=148 Identities=16% Similarity=0.145 Sum_probs=80.1
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE--C--CEEEEEecCCCCCCCCeEEEEeCCCCce
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--N--DLLYAVGGHDGQSYLNSIERYDPQTNQW 362 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~~~~~W 362 (482)
++..++.|+.. ..+..||....++.....+...........+ + +.+++.|+.++ .+..||..+++|
T Consensus 22 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~~~~ 91 (379)
T 3jrp_A 22 YGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG-----KVLIWKEENGRW 91 (379)
T ss_dssp SSSEEEEEETT-----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS-----CEEEEEEETTEE
T ss_pred CCCEEEEEECC-----CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC-----EEEEEEcCCCce
Confidence 45566666532 3467777776666555444333333333333 2 67777787653 689999999988
Q ss_pred eecCCCCCCcccceeEEEE--C--CEEEEEeccCCCcccCeEEEEeCCCCceeecCCC-CCCccceEEEEE---------
Q psy11333 363 SCDVAPTTSCRTSVGVAVL--D--GFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPM-TTRRLGVAVAVL--------- 428 (482)
Q Consensus 363 ~~~~~~~~~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-~~~r~~~~~~~~--------- 428 (482)
..+ ............+.+ + +.++++|+.++ .+..||..+........+ .......++...
T Consensus 92 ~~~-~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 165 (379)
T 3jrp_A 92 SQI-AVHAVHSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 165 (379)
T ss_dssp EEE-EEECCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC------
T ss_pred eEe-eeecCCCcceEEEEeCCCCCCCEEEEecCCC-----cEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccccc
Confidence 765 222222222222222 3 66777777543 577888876532111111 111111222222
Q ss_pred -----CCEEEEEcCCCCCCCCCeEEEEeCCCC
Q psy11333 429 -----GGFLYAIGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 429 -----~~~i~v~GG~~~~~~~~~~~~y~~~~~ 455 (482)
++..++.|+.++ .+.+||..+.
T Consensus 166 ~~~~~~~~~l~~~~~dg-----~i~i~d~~~~ 192 (379)
T 3jrp_A 166 HNGTKESRKFVTGGADN-----LVKIWKYNSD 192 (379)
T ss_dssp ----CTTCEEEEEETTS-----CEEEEEEETT
T ss_pred ccCCCCCCEEEEEeCCC-----eEEEEEecCC
Confidence 467888887764 5777876543
No 70
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.61 E-value=0.22 Score=47.53 Aligned_cols=138 Identities=14% Similarity=0.072 Sum_probs=80.4
Q ss_pred eeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCC---CcccceeEE
Q psy11333 304 SVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTT---SCRTSVGVA 379 (482)
Q Consensus 304 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~---~~r~~~~~~ 379 (482)
.++.+|+.+.++..+..++.+....+++.. ++.+++.++.+ ..+.+||+.+++.... .+.. .+......+
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~-----~~i~~~d~~~g~~~~~-~~~~~~~~~~~~v~~~ 175 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLED-----EGMDVLDINSGQTVRL-SPPEKYKKKLGFVETI 175 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEEEBTTS-----SSEEEEETTTCCEEEE-CCCHHHHTTCCEEEEE
T ss_pred EEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEEEeCCC-----CeEEEEECCCCeEeee-cCcccccccCCceeEE
Confidence 688899988777665544433333333333 67888877644 3599999998887654 2221 111112222
Q ss_pred EE--CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE--CCEEEEEcCCCCCCCCCeEEEEeCCCC
Q psy11333 380 VL--DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL--GGFLYAIGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 380 ~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~y~~~~~ 455 (482)
.+ ++++++.|+.+ ..+..||+.+.+....-. ........++.. +..+|+.++.+ ..+.+||+.+.
T Consensus 176 ~~~~~~~~~~s~~~d-----~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~-----~~i~~~d~~~~ 244 (433)
T 3bws_A 176 SIPEHNELWVSQMQA-----NAVHVFDLKTLAYKATVD-LTGKWSKILLYDPIRDLVYCSNWIS-----EDISVIDRKTK 244 (433)
T ss_dssp EEGGGTEEEEEEGGG-----TEEEEEETTTCCEEEEEE-CSSSSEEEEEEETTTTEEEEEETTT-----TEEEEEETTTT
T ss_pred EEcCCCEEEEEECCC-----CEEEEEECCCceEEEEEc-CCCCCeeEEEEcCCCCEEEEEecCC-----CcEEEEECCCC
Confidence 33 68899888743 468899988765432211 111222233333 34577776554 47899998876
Q ss_pred cee
Q psy11333 456 RWT 458 (482)
Q Consensus 456 ~W~ 458 (482)
+..
T Consensus 245 ~~~ 247 (433)
T 3bws_A 245 LEI 247 (433)
T ss_dssp EEE
T ss_pred cEE
Confidence 543
No 71
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=95.34 E-value=1.4 Score=39.04 Aligned_cols=154 Identities=12% Similarity=0.055 Sum_probs=83.4
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCC----CCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCC
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMS----KRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQT 359 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~----~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 359 (482)
.++.+|+.+... ..+..||+..+.....+... ......+++.. ++.+|+.+... ...+.+||+..
T Consensus 39 ~~g~l~v~~~~~-----~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~----~~~i~~~d~~g 109 (286)
T 1q7f_A 39 AQNDIIVADTNN-----HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP----THQIQIYNQYG 109 (286)
T ss_dssp TTCCEEEEEGGG-----TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG----GCEEEEECTTS
T ss_pred CCCCEEEEECCC-----CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC----CCEEEEECCCC
Confidence 457788875421 46889998865444433211 11122344542 67899887421 24689999665
Q ss_pred CceeecCCCCCCcccceeEEE-ECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCEEEEEcC
Q psy11333 360 NQWSCDVAPTTSCRTSVGVAV-LDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGFLYAIGG 437 (482)
Q Consensus 360 ~~W~~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG 437 (482)
..-+.+ .. +......++++ -+|++|+.... ...+.+||+.......+..........+++.- +|++|+.+.
T Consensus 110 ~~~~~~-~~-~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 110 QFVRKF-GA-TILQHPRGVTVDNKGRIIVVECK-----VMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp CEEEEE-CT-TTCSCEEEEEECTTSCEEEEETT-----TTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred cEEEEe-cC-ccCCCceEEEEeCCCCEEEEECC-----CCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 544444 21 11111223333 36789988643 24688999876544443221111112233333 678998764
Q ss_pred CCCCCCCCeEEEEeCCCCceeec
Q psy11333 438 SDGQSPLNTVERFDPKLNRWTAM 460 (482)
Q Consensus 438 ~~~~~~~~~~~~y~~~~~~W~~~ 460 (482)
.+ +.+.+||+..+....+
T Consensus 183 ~~-----~~i~~~~~~g~~~~~~ 200 (286)
T 1q7f_A 183 RA-----HCVKVFNYEGQYLRQI 200 (286)
T ss_dssp GG-----TEEEEEETTCCEEEEE
T ss_pred CC-----CEEEEEcCCCCEEEEE
Confidence 32 5789999866544444
No 72
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.31 E-value=1.4 Score=39.02 Aligned_cols=148 Identities=12% Similarity=0.059 Sum_probs=82.0
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCC-CCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCcee
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMS-KRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWS 363 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~-~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 363 (482)
.++.+|+.... ...++++|+. .++.... ++ ......+++.. ++.||+.+.. ...+.+||+ +++..
T Consensus 66 ~~g~l~v~~~~-----~~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~d~-~g~~~ 132 (299)
T 2z2n_A 66 SDGEVWFTENA-----ANKIGRITKK-GIIKEYT-LPNPDSAPYGITEGPNGDIWFTEMN-----GNRIGRITD-DGKIR 132 (299)
T ss_dssp TTSCEEEEETT-----TTEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEE
T ss_pred CCCCEEEeCCC-----CCeEEEECCC-CcEEEEe-CCCcCCCceeeEECCCCCEEEEecC-----CceEEEECC-CCCEE
Confidence 45678776431 1358889986 4454433 22 12223344443 6789987643 246899999 66665
Q ss_pred ecCCCCCCcccceeEEEE-CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCcc-ceEEEEE-CCEEEEEcCCCC
Q psy11333 364 CDVAPTTSCRTSVGVAVL-DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRL-GVAVAVL-GGFLYAIGGSDG 440 (482)
Q Consensus 364 ~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~-~~~~~~~-~~~i~v~GG~~~ 440 (482)
.. ..........+++.. +|++|+.... ...+.+||+ +.+..... .+.... ..+++.- +|.+|+.....
T Consensus 133 ~~-~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~- 203 (299)
T 2z2n_A 133 EY-ELPNKGSYPSFITLGSDNALWFTENQ-----NNAIGRITE-SGDITEFK-IPTPASGPVGITKGNDDALWFVEIIG- 203 (299)
T ss_dssp EE-ECSSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEETTT-
T ss_pred Ee-cCCCCCCCCceEEEcCCCCEEEEeCC-----CCEEEEEcC-CCcEEEee-CCCCCCcceeEEECCCCCEEEEccCC-
Confidence 44 111111222334433 5789987532 246889999 67766542 111112 2233333 57888876432
Q ss_pred CCCCCeEEEEeCCCCceeec
Q psy11333 441 QSPLNTVERFDPKLNRWTAM 460 (482)
Q Consensus 441 ~~~~~~~~~y~~~~~~W~~~ 460 (482)
+.+.+||+ +.++..+
T Consensus 204 ----~~i~~~~~-~g~~~~~ 218 (299)
T 2z2n_A 204 ----NKIGRITT-SGEITEF 218 (299)
T ss_dssp ----TEEEEECT-TCCEEEE
T ss_pred ----ceEEEECC-CCcEEEE
Confidence 46899998 6666554
No 73
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.26 E-value=1.9 Score=44.15 Aligned_cols=118 Identities=25% Similarity=0.373 Sum_probs=71.4
Q ss_pred CCCCCcEEEEeccccCCCCCceeEEEeCCCCC--eeeccCCCCC--------CCceeEEEECCEEEEEecCCCCCCCCeE
Q psy11333 283 PSRRGEVLFAVGGWCSGDAISSVERYDPQSSD--WKIVAPMSKR--------RCGVGVAVLNDLLYAVGGHDGQSYLNSI 352 (482)
Q Consensus 283 ~~~~~~~l~~~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~--------~~~~~~~~~~~~iyv~GG~~~~~~~~~~ 352 (482)
.++.++.||+.+.. ..++.+|..+.+ |+.-...+.. ....+.++.++.||+... + ..+
T Consensus 66 P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-d-----g~l 133 (689)
T 1yiq_A 66 PIVVDGVMYTTGPF------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-D-----GRL 133 (689)
T ss_dssp CEEETTEEEEECGG------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-T-----SEE
T ss_pred CEEECCEEEEEcCC------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-C-----CEE
Confidence 34568899987652 368999988764 8764332211 112334567889888542 2 468
Q ss_pred EEEeCCCCc--eeecCCC-CCC--cccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCc--eeec
Q psy11333 353 ERYDPQTNQ--WSCDVAP-TTS--CRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENK--WSRV 413 (482)
Q Consensus 353 ~~yd~~~~~--W~~~~~~-~~~--~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~--W~~~ 413 (482)
+.+|..|.+ |+.- .. -+. .....+-++.++.+|+..+.........+..||..|.+ |+.-
T Consensus 134 ~AlDa~TG~~~W~~~-~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 134 EAIDAKTGQRAWSVD-TRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEEETTTCCEEEEEE-CCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEeeeec-CcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 999998886 8865 22 111 11122335678998875432211123578999998775 8753
No 74
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.15 E-value=0.31 Score=45.06 Aligned_cols=153 Identities=16% Similarity=0.228 Sum_probs=81.2
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCC-ceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCcee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRC-GVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQWS 363 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~-~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 363 (482)
++.+++.||.+ ..+..+|..+..|.....+..... ....+.+ ++...+.|+.++ ++..||..+..++
T Consensus 27 ~g~~las~~~D-----~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~-----~v~iw~~~~~~~~ 96 (345)
T 3fm0_A 27 AGTLLASCGGD-----RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA-----TTCIWKKNQDDFE 96 (345)
T ss_dssp TSSCEEEEETT-----SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEECCC-EE
T ss_pred CCCEEEEEcCC-----CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC-----cEEEEEccCCCeE
Confidence 45666666643 357778887777753322222221 1222222 677778888663 5788888877765
Q ss_pred ecCCCCCCcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCC-ceeecCCCCCCccceEEEEE--CCEEEEEcCC
Q psy11333 364 CDVAPTTSCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKEN-KWSRVAPMTTRRLGVAVAVL--GGFLYAIGGS 438 (482)
Q Consensus 364 ~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~ 438 (482)
.+ ..+.........+.+ ++++++.|+.++ .+..||..+. .+..+..+.........+.+ ++.+++.|+.
T Consensus 97 ~~-~~~~~h~~~v~~v~~sp~~~~l~s~s~D~-----~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~ 170 (345)
T 3fm0_A 97 CV-TTLEGHENEVKSVAWAPSGNLLATCSRDK-----SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASY 170 (345)
T ss_dssp EE-EEECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEET
T ss_pred EE-EEccCCCCCceEEEEeCCCCEEEEEECCC-----eEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeC
Confidence 44 222211111222222 677888887653 4777887654 23322211111111122222 6677778776
Q ss_pred CCCCCCCeEEEEeCCCCceeec
Q psy11333 439 DGQSPLNTVERFDPKLNRWTAM 460 (482)
Q Consensus 439 ~~~~~~~~~~~y~~~~~~W~~~ 460 (482)
++ .+..||..+++|..+
T Consensus 171 d~-----~i~~w~~~~~~~~~~ 187 (345)
T 3fm0_A 171 DD-----TVKLYREEEDDWVCC 187 (345)
T ss_dssp TS-----CEEEEEEETTEEEEE
T ss_pred CC-----cEEEEEecCCCEEEE
Confidence 53 577888777777543
No 75
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.13 E-value=1.2 Score=44.62 Aligned_cols=120 Identities=13% Similarity=0.197 Sum_probs=70.5
Q ss_pred CCCCCcEEEEeccccCCCCCceeEEEeC-CCC--CeeeccCCCCC--------CCceeEEEECCEEEEEecCCCCCCCCe
Q psy11333 283 PSRRGEVLFAVGGWCSGDAISSVERYDP-QSS--DWKIVAPMSKR--------RCGVGVAVLNDLLYAVGGHDGQSYLNS 351 (482)
Q Consensus 283 ~~~~~~~l~~~GG~~~~~~~~~~~~~d~-~~~--~W~~~~~~~~~--------~~~~~~~~~~~~iyv~GG~~~~~~~~~ 351 (482)
.++.++.||+.... ...++++|. .+. .|+.-...+.. ....+.++.++.||+..+ ...
T Consensus 58 P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg~ 126 (571)
T 2ad6_A 58 PLVIGDMMYVHSAF-----PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------NGH 126 (571)
T ss_dssp CEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSE
T ss_pred cEEECCEEEEEeCC-----CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC------CCE
Confidence 34568899988652 246899998 666 48764332211 112345667999998643 246
Q ss_pred EEEEeCCCCc--eeecCCCCCCc-ccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCC--ceeec
Q psy11333 352 IERYDPQTNQ--WSCDVAPTTSC-RTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKEN--KWSRV 413 (482)
Q Consensus 352 ~~~yd~~~~~--W~~~~~~~~~~-r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~--~W~~~ 413 (482)
++++|..+.+ |+.-....+.. ....+-++.++++|+..+.........+..||+.+. .|+.-
T Consensus 127 l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 127 LLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 9999998875 88541221111 111233456899887654211111347899999865 58653
No 76
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.13 E-value=1.6 Score=38.63 Aligned_cols=151 Identities=8% Similarity=0.031 Sum_probs=83.9
Q ss_pred CCCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEE-ECCEEEEEecCCCCCCCCeEEEEeCCCCcee
Q psy11333 285 RRGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAV-LNDLLYAVGGHDGQSYLNSIERYDPQTNQWS 363 (482)
Q Consensus 285 ~~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 363 (482)
..++.+|+... ....+..||+. ..+...........-++++. -++.+|+....+ ..+.+||+. ++++
T Consensus 23 d~~g~l~v~~~-----~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~-g~~~ 90 (299)
T 2z2n_A 23 SDKGKVWITQH-----KANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAA-----NKIGRITKK-GIIK 90 (299)
T ss_dssp CTTSCEEEEET-----TTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTT-----TEEEEECTT-SCEE
T ss_pred CCCCCEEEEec-----CCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCC-----CeEEEECCC-CcEE
Confidence 34677887642 12468999998 77765432111222334444 367888875422 368999987 5555
Q ss_pred ecCCCCCCcccceeEEEE-CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCEEEEEcCCCCC
Q psy11333 364 CDVAPTTSCRTSVGVAVL-DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGFLYAIGGSDGQ 441 (482)
Q Consensus 364 ~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~ 441 (482)
.. ........-.+++.. +|++|+.... ...+.+||+ +.+...............++.- +|.+|+....+
T Consensus 91 ~~-~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-- 161 (299)
T 2z2n_A 91 EY-TLPNPDSAPYGITEGPNGDIWFTEMN-----GNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQN-- 161 (299)
T ss_dssp EE-ECSSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTT--
T ss_pred EE-eCCCcCCCceeeEECCCCCEEEEecC-----CceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCC--
Confidence 54 211112222344443 5889987543 246888998 5555543321112222333333 67888875322
Q ss_pred CCCCeEEEEeCCCCceeec
Q psy11333 442 SPLNTVERFDPKLNRWTAM 460 (482)
Q Consensus 442 ~~~~~~~~y~~~~~~W~~~ 460 (482)
..+++||+ +.+...+
T Consensus 162 ---~~i~~~~~-~g~~~~~ 176 (299)
T 2z2n_A 162 ---NAIGRITE-SGDITEF 176 (299)
T ss_dssp ---TEEEEECT-TCCEEEE
T ss_pred ---CEEEEEcC-CCcEEEe
Confidence 46899998 6666554
No 77
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.11 E-value=1.7 Score=38.61 Aligned_cols=150 Identities=7% Similarity=0.057 Sum_probs=83.0
Q ss_pred CCCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCcee
Q psy11333 285 RRGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWS 363 (482)
Q Consensus 285 ~~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 363 (482)
..++.+|+... ....+.+||+. .+............-++++.- ++.+|+.... ...+.+||+. ++++
T Consensus 28 d~~g~l~v~~~-----~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~v~~~d~~-g~~~ 95 (300)
T 2qc5_A 28 SEDGKVWFTQH-----KANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENG-----ANKIGKLSKK-GGFT 95 (300)
T ss_dssp CTTSCEEEEET-----TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEE
T ss_pred CCCCCEEEEcC-----CCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecC-----CCeEEEECCC-CCeE
Confidence 34678888753 12468899988 666553321111222344442 5788887542 2468999998 7666
Q ss_pred ecCCCCCCcccceeEEEE-CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCC-ccceEEEEE-CCEEEEEcCCCC
Q psy11333 364 CDVAPTTSCRTSVGVAVL-DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTR-RLGVAVAVL-GGFLYAIGGSDG 440 (482)
Q Consensus 364 ~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~-r~~~~~~~~-~~~i~v~GG~~~ 440 (482)
.. ..........+++.. +|++|+.... ...+.+||+. .+..... .+.. .....++.- ++++|+....+
T Consensus 96 ~~-~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~- 166 (300)
T 2qc5_A 96 EY-PLPQPDSGPYGITEGLNGDIWFTQLN-----GDRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTENQN- 166 (300)
T ss_dssp EE-ECSSTTCCEEEEEECSTTCEEEEETT-----TTEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEETTT-
T ss_pred Ee-cCCCCCCCCccceECCCCCEEEEccC-----CCeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEecCC-
Confidence 54 211111222344443 6889987542 2468889987 5554332 2211 222233332 57788875422
Q ss_pred CCCCCeEEEEeCCCCceeec
Q psy11333 441 QSPLNTVERFDPKLNRWTAM 460 (482)
Q Consensus 441 ~~~~~~~~~y~~~~~~W~~~ 460 (482)
..+++||+ +.++..+
T Consensus 167 ----~~i~~~~~-~g~~~~~ 181 (300)
T 2qc5_A 167 ----NSIGRITN-TGKLEEY 181 (300)
T ss_dssp ----TEEEEECT-TCCEEEE
T ss_pred ----CeEEEECC-CCcEEEe
Confidence 46889988 5665554
No 78
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.08 E-value=0.75 Score=40.39 Aligned_cols=146 Identities=16% Similarity=0.122 Sum_probs=82.1
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
.++.+|+... ...+.+||+.++........ ......++++- ++.+|+.... ...+.+|+..+.....
T Consensus 76 ~~g~l~v~~~------~~~i~~~d~~~~~~~~~~~~-~~~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~ 143 (270)
T 1rwi_B 76 GAGTVYVTDF------NNRVVTLAAGSNNQTVLPFD-GLNYPEGLAVDTQGAVYVADRG-----NNRVVKLAAGSKTQTV 143 (270)
T ss_dssp TTCCEEEEET------TTEEEEECTTCSCCEECCCC-SCSSEEEEEECTTCCEEEEEGG-----GTEEEEECTTCCSCEE
T ss_pred CCCCEEEEcC------CCEEEEEeCCCceEeeeecC-CcCCCcceEECCCCCEEEEECC-----CCEEEEEECCCceeEe
Confidence 3567888754 24689999988765443221 11222344443 6789987643 2468899877665543
Q ss_pred cCCCCCCcccceeEEEE-CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCEEEEEcCCCCCC
Q psy11333 365 DVAPTTSCRTSVGVAVL-DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGFLYAIGGSDGQS 442 (482)
Q Consensus 365 ~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~ 442 (482)
. .... .....+++.. +|++|+.... ...+.+||+.+..-........ ....+++.- +|.+|+....+
T Consensus 144 ~-~~~~-~~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~d~~g~l~v~~~~~--- 212 (270)
T 1rwi_B 144 L-PFTG-LNDPDGVAVDNSGNVYVTDTD-----NNRVVKLEAESNNQVVLPFTDI-TAPWGIAVDEAGTVYVTEHNT--- 212 (270)
T ss_dssp C-CCCS-CCSCCCEEECTTCCEEEEEGG-----GTEEEEECTTTCCEEECCCSSC-CSEEEEEECTTCCEEEEETTT---
T ss_pred e-cccc-CCCceeEEEeCCCCEEEEECC-----CCEEEEEecCCCceEeecccCC-CCceEEEECCCCCEEEEECCC---
Confidence 3 1111 1112334443 5789988642 2468899988765433321111 122233333 56898886533
Q ss_pred CCCeEEEEeCCCCc
Q psy11333 443 PLNTVERFDPKLNR 456 (482)
Q Consensus 443 ~~~~~~~y~~~~~~ 456 (482)
+.+.+||+.+..
T Consensus 213 --~~v~~~~~~~~~ 224 (270)
T 1rwi_B 213 --NQVVKLLAGSTT 224 (270)
T ss_dssp --SCEEEECTTCSC
T ss_pred --CcEEEEcCCCCc
Confidence 468999987654
No 79
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.07 E-value=1.4 Score=45.05 Aligned_cols=120 Identities=16% Similarity=0.321 Sum_probs=72.6
Q ss_pred CCCCCcEEEEeccccCCCCCceeEEEeCCCCC--eeeccCCCCC--------CCceeEEEECCEEEEEecCCCCCCCCeE
Q psy11333 283 PSRRGEVLFAVGGWCSGDAISSVERYDPQSSD--WKIVAPMSKR--------RCGVGVAVLNDLLYAVGGHDGQSYLNSI 352 (482)
Q Consensus 283 ~~~~~~~l~~~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~--------~~~~~~~~~~~~iyv~GG~~~~~~~~~~ 352 (482)
.++.++.||+.... ..++.+|..+.+ |+.-...+.. ....+.++.++.||+... ...+
T Consensus 73 P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------dg~l 140 (677)
T 1kb0_A 73 PVVVDGIMYVSASW------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------DGRL 140 (677)
T ss_dssp CEEETTEEEEECGG------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT------TSEE
T ss_pred CEEECCEEEEECCC------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC------CCEE
Confidence 34568899988652 468999988764 8764432211 122345667889988643 2469
Q ss_pred EEEeCCCCc--eeecCC-CCCC-cccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCc--eeecC
Q psy11333 353 ERYDPQTNQ--WSCDVA-PTTS-CRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENK--WSRVA 414 (482)
Q Consensus 353 ~~yd~~~~~--W~~~~~-~~~~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~ 414 (482)
+++|..+.+ |+.-.. ..+. .....+-++.++++|+..+.........+..||..+.+ |+.-.
T Consensus 141 ~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 141 IALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp EEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred EEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEecc
Confidence 999998876 886512 1111 11122335668888876543221223578999998764 86643
No 80
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=94.94 E-value=0.51 Score=43.67 Aligned_cols=146 Identities=15% Similarity=0.173 Sum_probs=79.8
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCce-eEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGV-GVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
++.+++.|+.. ..+..||..+.+|.....+....... +++.. ++..++.|+.+ ..+..||..++++..
T Consensus 19 ~~~~l~~~~~d-----~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 19 DRTQIAICPNN-----HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD-----RNAYVWTLKGRTWKP 88 (372)
T ss_dssp TSSEEEEECSS-----SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT-----SCEEEEEEETTEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC-----CeEEEEECCCCeeee
Confidence 45666666532 46888999888776555443222222 23333 66777777755 368899998888765
Q ss_pred cCCCCCCcccce-eEEE-ECCEEEEEeccCCCcccCeEEEEeCCCCc-eeecCCC--CCCccceEEEEE-CCEEEEEcCC
Q psy11333 365 DVAPTTSCRTSV-GVAV-LDGFLYAVGGQDGVQCLNHVERYDPKENK-WSRVAPM--TTRRLGVAVAVL-GGFLYAIGGS 438 (482)
Q Consensus 365 ~~~~~~~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~--~~~r~~~~~~~~-~~~i~v~GG~ 438 (482)
. .......... ++.. -+++.+++|+.++ .+..||..+.. |...... +......++... ++..++.|+.
T Consensus 89 ~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 89 T-LVILRINRAARCVRWAPNEKKFAVGSGSR-----VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp E-EECCCCSSCEEEEEECTTSSEEEEEETTS-----SEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred e-EEeecCCCceeEEEECCCCCEEEEEeCCC-----EEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence 4 2111111112 2222 2577777777543 45666665443 3322221 212222233332 6677788776
Q ss_pred CCCCCCCeEEEEeCC
Q psy11333 439 DGQSPLNTVERFDPK 453 (482)
Q Consensus 439 ~~~~~~~~~~~y~~~ 453 (482)
++ .+.+||..
T Consensus 163 dg-----~i~~~d~~ 172 (372)
T 1k8k_C 163 DF-----KCRIFSAY 172 (372)
T ss_dssp TS-----CEEEEECC
T ss_pred CC-----CEEEEEcc
Confidence 53 57888853
No 81
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=94.86 E-value=2.3 Score=38.84 Aligned_cols=142 Identities=10% Similarity=0.115 Sum_probs=78.3
Q ss_pred ceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCc--eeecCCCC-----CCcc-
Q psy11333 303 SSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQ--WSCDVAPT-----TSCR- 373 (482)
Q Consensus 303 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~-----~~~r- 373 (482)
..+..+|+.+.+.........-....++++- ++.||+....+ ..+.+||+.... -..+.... ....
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~-----~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~ 143 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVAL-----HQVFKLDPHSKEGPLLILGRSMQPGSDQNHFC 143 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTT-----TEEEEECTTCSSCCSEEESBTTBCCCSTTCCS
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCC-----CEEEEEeCCCCeEEEEEecccCCCCCCccccC
Confidence 3689999987775432211111123344443 67899887532 579999987652 22221110 0111
Q ss_pred cceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCC-------CCCcc-ceEEEEE-C-CEEEEEcCCCCC
Q psy11333 374 TSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPM-------TTRRL-GVAVAVL-G-GFLYAIGGSDGQ 441 (482)
Q Consensus 374 ~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-------~~~r~-~~~~~~~-~-~~i~v~GG~~~~ 441 (482)
.-.++++. ++.+|+..+.. ...+.+||+....-..+... +.... -.++++- + +.||+....+
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~-- 217 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYC----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN-- 217 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSS----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT--
T ss_pred CCcEEEEeCCCCeEEEEeCCC----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC--
Confidence 12344444 68999998531 25688999654433333211 11111 2334443 4 8999997654
Q ss_pred CCCCeEEEEeCCCCcee
Q psy11333 442 SPLNTVERFDPKLNRWT 458 (482)
Q Consensus 442 ~~~~~~~~y~~~~~~W~ 458 (482)
+.|.+||+.+.+..
T Consensus 218 ---~~I~~~~~~~G~~~ 231 (329)
T 3fvz_A 218 ---GRIQCFKTDTKEFV 231 (329)
T ss_dssp ---TEEEEEETTTCCEE
T ss_pred ---CEEEEEECCCCcEE
Confidence 57999999866553
No 82
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=94.82 E-value=0.12 Score=48.35 Aligned_cols=146 Identities=14% Similarity=0.149 Sum_probs=75.7
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCc-ee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQ-WS 363 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~ 363 (482)
++.+++.|+.. ..+..||..++.|.....+.........+.+ ++..++.|+.+ ..+..||..+.. |.
T Consensus 22 ~g~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 22 QRTEFVTTTAT-----NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD-----RNAYVYEKRPDGTWK 91 (377)
T ss_dssp SSSEEECCCSS-----SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT-----SSEEEC------CCC
T ss_pred CCCEEEEecCC-----CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC-----CeEEEEEcCCCCcee
Confidence 56666777632 3577888888888776666543333333333 56777777765 368899998877 55
Q ss_pred ecCCCCCCcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCc-eeecCCCCC--CccceEEEEE-CCEEEEEcC
Q psy11333 364 CDVAPTTSCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENK-WSRVAPMTT--RRLGVAVAVL-GGFLYAIGG 437 (482)
Q Consensus 364 ~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~~~--~r~~~~~~~~-~~~i~v~GG 437 (482)
.. ..+.........+.+ +++.++.|+.++ .+..||..+.+ |.....+.. .....+++.. ++.+++.|+
T Consensus 92 ~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 165 (377)
T 3dwl_C 92 QT-LVLLRLNRAATFVRWSPNEDKFAVGSGAR-----VISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGC 165 (377)
T ss_dssp CE-EECCCCSSCEEEEECCTTSSCCEEEESSS-----CEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEE
T ss_pred ee-eEecccCCceEEEEECCCCCEEEEEecCC-----eEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEe
Confidence 43 111111111222222 577777777543 57788887664 433332222 2222233333 667788887
Q ss_pred CCCCCCCCeEEEEeCC
Q psy11333 438 SDGQSPLNTVERFDPK 453 (482)
Q Consensus 438 ~~~~~~~~~~~~y~~~ 453 (482)
.++ .+.+||..
T Consensus 166 ~d~-----~i~iwd~~ 176 (377)
T 3dwl_C 166 ADR-----KAYVLSAY 176 (377)
T ss_dssp SSS-----CEEEEEEC
T ss_pred CCC-----EEEEEEEE
Confidence 653 57778764
No 83
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=94.82 E-value=2 Score=38.06 Aligned_cols=148 Identities=9% Similarity=0.058 Sum_probs=82.0
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
.++.+|+.... ...+.+||+. .++............++++.- ++.+|+....+ ..+.+||+. .+...
T Consensus 71 ~~g~l~v~~~~-----~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~-g~~~~ 138 (300)
T 2qc5_A 71 SLGDIWFTENG-----ANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNG-----DRIGKLTAD-GTIYE 138 (300)
T ss_dssp TTSCEEEEETT-----TTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTT-----TEEEEECTT-SCEEE
T ss_pred CCCCEEEEecC-----CCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCC-----CeEEEECCC-CCEEE
Confidence 45678876431 2468899998 666543321112223344443 67888875422 468999998 66554
Q ss_pred cCCCCC-CcccceeEEE-ECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccce-EEEEE-CCEEEEEcCCCC
Q psy11333 365 DVAPTT-SCRTSVGVAV-LDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGV-AVAVL-GGFLYAIGGSDG 440 (482)
Q Consensus 365 ~~~~~~-~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~-~~~~~-~~~i~v~GG~~~ 440 (482)
. . ++ ......+++. -+|++|+.... ...+.+||+ +.++.... .+...... +++.- +|.||+....+
T Consensus 139 ~-~-~~~~~~~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~- 208 (300)
T 2qc5_A 139 Y-D-LPNKGSYPAFITLGSDNALWFTENQ-----NNSIGRITN-TGKLEEYP-LPTNAAAPVGITSGNDGALWFVEIMG- 208 (300)
T ss_dssp E-E-CSSTTCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEETTT-
T ss_pred c-c-CCCCCCCceeEEECCCCCEEEEecC-----CCeEEEECC-CCcEEEee-CCCCCCCcceEEECCCCCEEEEccCC-
Confidence 4 1 12 1112233333 35788887532 246889998 66665543 22222222 33332 67888875432
Q ss_pred CCCCCeEEEEeCCCCceeec
Q psy11333 441 QSPLNTVERFDPKLNRWTAM 460 (482)
Q Consensus 441 ~~~~~~~~~y~~~~~~W~~~ 460 (482)
..+.+||+ +.++...
T Consensus 209 ----~~i~~~~~-~g~~~~~ 223 (300)
T 2qc5_A 209 ----NKIGRITT-TGEISEY 223 (300)
T ss_dssp ----TEEEEECT-TCCEEEE
T ss_pred ----CEEEEEcC-CCcEEEE
Confidence 46889988 5555544
No 84
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=94.67 E-value=0.86 Score=40.94 Aligned_cols=107 Identities=17% Similarity=0.162 Sum_probs=56.8
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE----CCEEEEEecCCCCCCCCeEEEEeCCCCc
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL----NDLLYAVGGHDGQSYLNSIERYDPQTNQ 361 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 361 (482)
.++..++.|+.+ ..+..+|..+.....+..+.........+.+ ++.+.+.|+.+ .++..||..+.+
T Consensus 19 ~~g~~las~s~D-----~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D-----~~v~iWd~~~~~ 88 (297)
T 2pm7_B 19 YYGKRMATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVMIWKEENGR 88 (297)
T ss_dssp TTSSEEEEEETT-----SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-----TEEEEEEBSSSC
T ss_pred CCCCEEEEEeCC-----CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC-----CEEEEEEcCCCc
Confidence 346666677643 3567777765443332222211112222222 26778888866 378999999888
Q ss_pred eeecCCCCCCcccceeEEEE--C--CEEEEEeccCCCcccCeEEEEeCCCC
Q psy11333 362 WSCDVAPTTSCRTSVGVAVL--D--GFLYAVGGQDGVQCLNHVERYDPKEN 408 (482)
Q Consensus 362 W~~~~~~~~~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~yd~~~~ 408 (482)
|..+ ..+.........+.+ + +.+++.|+.++ .+..||..+.
T Consensus 89 ~~~~-~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~-----~v~~wd~~~~ 133 (297)
T 2pm7_B 89 WSQI-AVHAVHSASVNSVQWAPHEYGPMLLVASSDG-----KVSVVEFKEN 133 (297)
T ss_dssp BCCC-EEECCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEEBCSS
T ss_pred eEEE-EEeecCCCceeEEEeCcCCCCcEEEEEECCC-----cEEEEEecCC
Confidence 7654 211111111222222 2 56777777543 5677777654
No 85
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=94.67 E-value=0.75 Score=41.87 Aligned_cols=170 Identities=11% Similarity=0.125 Sum_probs=85.9
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCC-CCeeecc----CCCCCCCceeEEEE-CC-EEEEEecCCCCCCCCeEEEEeCC-
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQS-SDWKIVA----PMSKRRCGVGVAVL-ND-LLYAVGGHDGQSYLNSIERYDPQ- 358 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~-~~W~~~~----~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~- 358 (482)
++.+|+.+... ..+..||..+ .++.... ..+......+++.. ++ .+|+.+..+ ..+..||..
T Consensus 140 g~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~-----~~i~~~~~~~ 209 (343)
T 1ri6_A 140 NRTLWVPALKQ-----DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELN-----SSVDVWELKD 209 (343)
T ss_dssp SSEEEEEEGGG-----TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTT-----TEEEEEESSC
T ss_pred CCEEEEecCCC-----CEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCC-----CEEEEEEecC
Confidence 34677765221 3588888877 6554322 11111111223332 44 477776432 468888884
Q ss_pred -CCceeec--CCCCCCc---ccce-eEEEE-CC-EEEEEeccCCCcccCeEEEEeCC--CCceeecCCCCCCccceEEEE
Q psy11333 359 -TNQWSCD--VAPTTSC---RTSV-GVAVL-DG-FLYAVGGQDGVQCLNHVERYDPK--ENKWSRVAPMTTRRLGVAVAV 427 (482)
Q Consensus 359 -~~~W~~~--~~~~~~~---r~~~-~~~~~-~~-~lyv~GG~~~~~~~~~~~~yd~~--~~~W~~~~~~~~~r~~~~~~~ 427 (482)
+.+++.. ....+.. .... +++.. ++ .+|+.++.+ ..+..||+. +.++..+...+.......++.
T Consensus 210 ~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~-----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (343)
T 1ri6_A 210 PHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTA-----SLITVFSVSEDGSVLSKEGFQPTETQPRGFNV 284 (343)
T ss_dssp TTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTT-----TEEEEEEECTTSCCEEEEEEEECSSSCCCEEE
T ss_pred CCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCC-----CEEEEEEEcCCCCceEEeeeecCCCccceEEE
Confidence 4544322 0212221 1112 23332 34 577665432 357778876 556666654433222223333
Q ss_pred E-CC-EEEEEcCCCCCCCCCeEEEE--eCCCCceeecCCCCcCCCceeEEEEc
Q psy11333 428 L-GG-FLYAIGGSDGQSPLNTVERF--DPKLNRWTAMAPMSTRRKHLGCAVFV 476 (482)
Q Consensus 428 ~-~~-~i~v~GG~~~~~~~~~~~~y--~~~~~~W~~~~~~~~~r~~~~~~~~~ 476 (482)
. ++ .||+.++.+ +.+.+| |+++.+++.+..++.+..-.+++...
T Consensus 285 s~dg~~l~~~~~~~-----~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~ 332 (343)
T 1ri6_A 285 DHSGKYLIAAGQKS-----HHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNA 332 (343)
T ss_dssp CTTSSEEEEECTTT-----CEEEEEEEETTTTEEEEEEEEECSSSCCEEEEEE
T ss_pred CCCCCEEEEecCCC-----CeEEEEEEcCCCceeeEccccccCCCCeeEEEEc
Confidence 3 44 466665433 345555 88888898887776654444444443
No 86
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=94.61 E-value=0.3 Score=46.80 Aligned_cols=146 Identities=17% Similarity=0.173 Sum_probs=78.1
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEECCEEEEEecCCCCCCCCeEEEEeCCCCceeecC
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDV 366 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 366 (482)
++.+++.|+.+ ..+..+|..+.+.... +...........+++..++.||.++ .+..||..+..-....
T Consensus 182 ~~~~l~sg~~d-----g~i~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~s~s~dg-----~i~vwd~~~~~~~~~~ 249 (435)
T 1p22_A 182 DERVIITGSSD-----STVRVWDVNTGEMLNT--LIHHCEAVLHLRFNNGMMVTCSKDR-----SIAVWDMASPTDITLR 249 (435)
T ss_dssp CSSEEEEEETT-----SCEEEEESSSCCEEEE--ECCCCSCEEEEECCTTEEEEEETTS-----CEEEEECSSSSCCEEE
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcEEEE--EcCCCCcEEEEEEcCCEEEEeeCCC-----cEEEEeCCCCCCceee
Confidence 55666666532 3577888877654321 2222222333344666777777653 6889998876532110
Q ss_pred CCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEECCEEEEEcCCCCCCCCCe
Q psy11333 367 APTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVLGGFLYAIGGSDGQSPLNT 446 (482)
Q Consensus 367 ~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~ 446 (482)
..+.........+..++..++.|+.+ ..+..||..+.+-... +.........+..++..++.|+.++ .
T Consensus 250 ~~~~~~~~~v~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~g~~dg-----~ 317 (435)
T 1p22_A 250 RVLVGHRAAVNVVDFDDKYIVSASGD-----RTIKVWNTSTCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDN-----T 317 (435)
T ss_dssp EEECCCSSCEEEEEEETTEEEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEEETTEEEEEETTS-----C
T ss_pred eEecCCCCcEEEEEeCCCEEEEEeCC-----CeEEEEECCcCcEEEE--EcCCCCcEEEEEeCCCEEEEEeCCC-----e
Confidence 00111112223334467777777754 3578899877643222 1111122233444677777777653 5
Q ss_pred EEEEeCCCCc
Q psy11333 447 VERFDPKLNR 456 (482)
Q Consensus 447 ~~~y~~~~~~ 456 (482)
+.+||..+.+
T Consensus 318 i~iwd~~~~~ 327 (435)
T 1p22_A 318 IRLWDIECGA 327 (435)
T ss_dssp EEEEETTTCC
T ss_pred EEEEECCCCC
Confidence 8888887653
No 87
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=94.60 E-value=0.73 Score=41.59 Aligned_cols=143 Identities=13% Similarity=0.154 Sum_probs=75.9
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
++..++.|+.. ..+..+|..+.+....-. ........+.+ ++.+.+.||.+ ..+..||..+.+-..
T Consensus 34 ~~~~l~s~~~d-----g~i~iw~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~ 101 (312)
T 4ery_A 34 NGEWLASSSAD-----KLIKIWGAYDGKFEKTIS--GHKLGISDVAWSSDSNLLVSASDD-----KTLKIWDVSSGKCLK 101 (312)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTCCEEEEEC--CCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEE
T ss_pred CCCEEEEeeCC-----CeEEEEeCCCcccchhhc--cCCCceEEEEEcCCCCEEEEECCC-----CEEEEEECCCCcEEE
Confidence 45556666532 246778887776643221 11112222222 66777788765 368999998776432
Q ss_pred cCCCCCCcccce-eEE-EECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE--CCEEEEEcCCCC
Q psy11333 365 DVAPTTSCRTSV-GVA-VLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL--GGFLYAIGGSDG 440 (482)
Q Consensus 365 ~~~~~~~~r~~~-~~~-~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~ 440 (482)
. +....... ++. .-++.+++.|+.++ .+..||+.+.+-... ++........+.+ ++.+++.|+.++
T Consensus 102 ~---~~~~~~~v~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~ 171 (312)
T 4ery_A 102 T---LKGHSNYVFCCNFNPQSNLIVSGSFDE-----SVRIWDVKTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYDG 171 (312)
T ss_dssp E---EECCSSCEEEEEECSSSSEEEEEETTS-----CEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred E---EcCCCCCEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCEEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 2 11111111 122 22567777887643 578899887653222 1111111122222 667778887653
Q ss_pred CCCCCeEEEEeCCCCc
Q psy11333 441 QSPLNTVERFDPKLNR 456 (482)
Q Consensus 441 ~~~~~~~~~y~~~~~~ 456 (482)
.+.+||..+.+
T Consensus 172 -----~i~~wd~~~~~ 182 (312)
T 4ery_A 172 -----LCRIWDTASGQ 182 (312)
T ss_dssp -----CEEEEETTTCC
T ss_pred -----cEEEEECCCCc
Confidence 57777776554
No 88
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=94.57 E-value=3.4 Score=42.09 Aligned_cols=119 Identities=22% Similarity=0.350 Sum_probs=70.8
Q ss_pred CCCCCcEEEEeccccCCCCCceeEEEeCCCCC--eeeccCCCCC--------CCceeEEEECCEEEEEecCCCCCCCCeE
Q psy11333 283 PSRRGEVLFAVGGWCSGDAISSVERYDPQSSD--WKIVAPMSKR--------RCGVGVAVLNDLLYAVGGHDGQSYLNSI 352 (482)
Q Consensus 283 ~~~~~~~l~~~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~--------~~~~~~~~~~~~iyv~GG~~~~~~~~~~ 352 (482)
.++.++.||+.... ..++.+|..+.+ |+.-...+.. ....+.++.++.||+... + ..+
T Consensus 62 P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-d-----g~l 129 (668)
T 1kv9_A 62 PLFHDGVIYTSMSW------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-D-----GRL 129 (668)
T ss_dssp CEEETTEEEEEEGG------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-T-----SEE
T ss_pred CEEECCEEEEECCC------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-C-----CEE
Confidence 34568899987642 368899987764 8764332211 112344567889887542 2 469
Q ss_pred EEEeCCCCc--eeecCCCCC-CcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCC--ceeec
Q psy11333 353 ERYDPQTNQ--WSCDVAPTT-SCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKEN--KWSRV 413 (482)
Q Consensus 353 ~~yd~~~~~--W~~~~~~~~-~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~--~W~~~ 413 (482)
+.+|..|.+ |+.-....+ ......+-++.++++|+..+.........+..||+.+. .|+.-
T Consensus 130 ~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 130 IALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 999998886 886511111 11122233567898887543221122357899999876 48753
No 89
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=94.54 E-value=0.91 Score=43.36 Aligned_cols=146 Identities=11% Similarity=0.119 Sum_probs=82.0
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEECCEEEEEecCCCCCCCCeEEEEeCCCCceeec
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCD 365 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 365 (482)
.++..++.|+.. ..+..||..+.+-... +........+...++.+.+.|+.++ .+.+||..+++-...
T Consensus 141 ~d~~~l~~g~~d-----g~i~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~sg~~dg-----~i~vwd~~~~~~~~~ 208 (435)
T 1p22_A 141 YDDQKIVSGLRD-----NTIKIWDKNTLECKRI--LTGHTGSVLCLQYDERVIITGSSDS-----TVRVWDVNTGEMLNT 208 (435)
T ss_dssp CCSSEEEEEESS-----SCEEEEESSSCCEEEE--ECCCSSCEEEEECCSSEEEEEETTS-----CEEEEESSSCCEEEE
T ss_pred ECCCEEEEEeCC-----CeEEEEeCCCCeEEEE--EcCCCCcEEEEEECCCEEEEEcCCC-----eEEEEECCCCcEEEE
Confidence 356666777643 3578888877654322 2212222333445888888888664 689999988765432
Q ss_pred CCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeec-CCCCCCccceEEEEECCEEEEEcCCCCCCCC
Q psy11333 366 VAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRV-APMTTRRLGVAVAVLGGFLYAIGGSDGQSPL 444 (482)
Q Consensus 366 ~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~ 444 (482)
+...........+++..++.||.++ .+..||..+..-... ..+.........+..++..++.|+.+
T Consensus 209 ---~~~h~~~v~~l~~~~~~l~s~s~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d----- 275 (435)
T 1p22_A 209 ---LIHHCEAVLHLRFNNGMMVTCSKDR-----SIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD----- 275 (435)
T ss_dssp ---ECCCCSCEEEEECCTTEEEEEETTS-----CEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETT-----
T ss_pred ---EcCCCCcEEEEEEcCCEEEEeeCCC-----cEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCC-----
Confidence 1111222333444566777777543 577888876542211 11111112223334467777777765
Q ss_pred CeEEEEeCCCCc
Q psy11333 445 NTVERFDPKLNR 456 (482)
Q Consensus 445 ~~~~~y~~~~~~ 456 (482)
+.+.+||..+.+
T Consensus 276 g~i~vwd~~~~~ 287 (435)
T 1p22_A 276 RTIKVWNTSTCE 287 (435)
T ss_dssp SEEEEEETTTCC
T ss_pred CeEEEEECCcCc
Confidence 468888887654
No 90
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=94.53 E-value=0.64 Score=42.18 Aligned_cols=146 Identities=18% Similarity=0.198 Sum_probs=78.2
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCcee-EEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVG-VAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~-~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
++..++.|+.. ..+..||..+.+......+........ ++.. ++..++.|+.+ ..+..||..+.+...
T Consensus 108 ~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~v~~~d~~~~~~~~ 177 (337)
T 1gxr_A 108 DGCTLIVGGEA-----STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQTLVR 177 (337)
T ss_dssp TSSEEEEEESS-----SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEE
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCceee
Confidence 45555665532 368889998887544333322222222 2222 66677777755 358999998876543
Q ss_pred cCCCCCCcccceeEEE-ECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCEEEEEcCCCCCC
Q psy11333 365 DVAPTTSCRTSVGVAV-LDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGFLYAIGGSDGQS 442 (482)
Q Consensus 365 ~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~ 442 (482)
....... .-.++.. -++..+++|+.+ ..+..||+.+.+-......+ .....++.. ++..+++|+.++
T Consensus 178 ~~~~~~~--~i~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~~~-- 246 (337)
T 1gxr_A 178 QFQGHTD--GASCIDISNDGTKLWTGGLD-----NTVRSWDLREGRQLQQHDFT--SQIFSLGYCPTGEWLAVGMESS-- 246 (337)
T ss_dssp EECCCSS--CEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECS--SCEEEEEECTTSSEEEEEETTS--
T ss_pred eeecccC--ceEEEEECCCCCEEEEEecC-----CcEEEEECCCCceEeeecCC--CceEEEEECCCCCEEEEEcCCC--
Confidence 3121111 1112222 266777777753 35888998876543322222 222233332 667777777553
Q ss_pred CCCeEEEEeCCCCc
Q psy11333 443 PLNTVERFDPKLNR 456 (482)
Q Consensus 443 ~~~~~~~y~~~~~~ 456 (482)
.+..||..+.+
T Consensus 247 ---~i~~~~~~~~~ 257 (337)
T 1gxr_A 247 ---NVEVLHVNKPD 257 (337)
T ss_dssp ---CEEEEETTSSC
T ss_pred ---cEEEEECCCCC
Confidence 57888876554
No 91
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=94.50 E-value=1 Score=43.07 Aligned_cols=110 Identities=16% Similarity=0.192 Sum_probs=63.6
Q ss_pred EEEECCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCc
Q psy11333 330 VAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENK 409 (482)
Q Consensus 330 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~ 409 (482)
...+++..++.|+.+ ..+..||..+.+-...... ..........++..++.|+.++ .+..||..+.+
T Consensus 284 ~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~---~~~~v~~~~~~~~~l~~~~~dg-----~i~vwd~~~~~ 350 (445)
T 2ovr_B 284 SLQFDGIHVVSGSLD-----TSIRVWDVETGNCIHTLTG---HQSLTSGMELKDNILVSGNADS-----TVKIWDIKTGQ 350 (445)
T ss_dssp EEEECSSEEEEEETT-----SCEEEEETTTCCEEEEECC---CCSCEEEEEEETTEEEEEETTS-----CEEEEETTTCC
T ss_pred EEEECCCEEEEEeCC-----CeEEEEECCCCCEEEEEcC---CcccEEEEEEeCCEEEEEeCCC-----eEEEEECCCCc
Confidence 333477777777765 3588999987764322011 1112233344566777777543 57889987665
Q ss_pred eeecCCCC-CCccceEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCCce
Q psy11333 410 WSRVAPMT-TRRLGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLNRW 457 (482)
Q Consensus 410 W~~~~~~~-~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~~W 457 (482)
-...-..+ ........+..++..++.||.+ +.+.+||..+.+.
T Consensus 351 ~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~ 394 (445)
T 2ovr_B 351 CLQTLQGPNKHQSAVTCLQFNKNFVITSSDD-----GTVKLWDLKTGEF 394 (445)
T ss_dssp EEEEECSTTSCSSCEEEEEECSSEEEEEETT-----SEEEEEETTTCCE
T ss_pred EEEEEccCCCCCCCEEEEEECCCEEEEEeCC-----CeEEEEECCCCce
Confidence 33222211 1222233445577788888765 4789999887654
No 92
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=94.48 E-value=1.1 Score=40.36 Aligned_cols=146 Identities=16% Similarity=0.109 Sum_probs=75.8
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
++.+++.|+.. ..+..||..+.+-... +.........+.+ ++.+++.|+.++ .+..||..+.+-..
T Consensus 76 ~~~~l~s~~~d-----~~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~~ 143 (312)
T 4ery_A 76 DSNLLVSASDD-----KTLKIWDVSSGKCLKT--LKGHSNYVFCCNFNPQSNLIVSGSFDE-----SVRIWDVKTGKCLK 143 (312)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEECSSSSEEEEEETTS-----CEEEEETTTCCEEE
T ss_pred CCCEEEEECCC-----CEEEEEECCCCcEEEE--EcCCCCCEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCEEEE
Confidence 45566666532 3678888877653221 1111111122222 566777787653 58999998776432
Q ss_pred cCCCCCCcccceeEEE-ECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEE-EECCEEEEEcCCCCCC
Q psy11333 365 DVAPTTSCRTSVGVAV-LDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVA-VLGGFLYAIGGSDGQS 442 (482)
Q Consensus 365 ~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~-~~~~~i~v~GG~~~~~ 442 (482)
.......+ -.++.. -++++++.|+.++ .+..||..+.+....-..........+. .-++..++.|+.+
T Consensus 144 ~~~~~~~~--v~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--- 213 (312)
T 4ery_A 144 TLPAHSDP--VSAVHFNRDGSLIVSSSYDG-----LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD--- 213 (312)
T ss_dssp EECCCSSC--EEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETT---
T ss_pred EecCCCCc--EEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCC---
Confidence 20111111 112222 2577888887643 5788998876543221111111111122 2266677777765
Q ss_pred CCCeEEEEeCCCCc
Q psy11333 443 PLNTVERFDPKLNR 456 (482)
Q Consensus 443 ~~~~~~~y~~~~~~ 456 (482)
+.+.+||..+.+
T Consensus 214 --~~i~iwd~~~~~ 225 (312)
T 4ery_A 214 --NTLKLWDYSKGK 225 (312)
T ss_dssp --TEEEEEETTTTE
T ss_pred --CeEEEEECCCCc
Confidence 367888877654
No 93
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=94.45 E-value=0.79 Score=41.52 Aligned_cols=147 Identities=20% Similarity=0.226 Sum_probs=76.4
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeee-ccCC---CCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCc
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKI-VAPM---SKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQ 361 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~-~~~~---~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 361 (482)
++.+++.|+ . ..+..||..+..... ...+ .....-.+++.. ++..++.|+.+ ..+..||..+.+
T Consensus 62 ~~~~l~~~~-d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~ 130 (337)
T 1gxr_A 62 PTRHVYTGG-K-----GCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA-----STLSIWDLAAPT 130 (337)
T ss_dssp SSSEEEEEC-B-----SEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS-----SEEEEEECCCC-
T ss_pred CCcEEEEcC-C-----CeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC-----CcEEEEECCCCC
Confidence 456666665 2 467888887654211 1111 111111222222 56677777754 478999999887
Q ss_pred eeecCCCCCCcccc-eeEEE-ECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCEEEEEcCC
Q psy11333 362 WSCDVAPTTSCRTS-VGVAV-LDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGFLYAIGGS 438 (482)
Q Consensus 362 W~~~~~~~~~~r~~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~ 438 (482)
.... ......... .++.. -+++.+++|+.++ .+..||..+.+....-..... ...++... ++..++.|+.
T Consensus 131 ~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~v~~~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~ 203 (337)
T 1gxr_A 131 PRIK-AELTSSAPACYALAISPDSKVCFSCCSDG-----NIAVWDLHNQTLVRQFQGHTD-GASCIDISNDGTKLWTGGL 203 (337)
T ss_dssp -EEE-EEEECSSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEET
T ss_pred ccee-eecccCCCceEEEEECCCCCEEEEEeCCC-----cEEEEeCCCCceeeeeecccC-ceEEEEECCCCCEEEEEec
Confidence 5433 112111111 12222 2567777777543 588899887654332221111 12222222 6667777776
Q ss_pred CCCCCCCeEEEEeCCCCc
Q psy11333 439 DGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 439 ~~~~~~~~~~~y~~~~~~ 456 (482)
+ ..+.+||..+.+
T Consensus 204 d-----g~i~~~d~~~~~ 216 (337)
T 1gxr_A 204 D-----NTVRSWDLREGR 216 (337)
T ss_dssp T-----SEEEEEETTTTE
T ss_pred C-----CcEEEEECCCCc
Confidence 5 468888887654
No 94
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=94.30 E-value=0.93 Score=41.50 Aligned_cols=152 Identities=15% Similarity=0.098 Sum_probs=78.8
Q ss_pred CcEEEEecccc-CCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CC-EEEEEecCCCCCCCCeEEEEeCCCCcee
Q psy11333 287 GEVLFAVGGWC-SGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-ND-LLYAVGGHDGQSYLNSIERYDPQTNQWS 363 (482)
Q Consensus 287 ~~~l~~~GG~~-~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 363 (482)
++.+|+..... .......++.+|+.+.+....-+. +...++++.. ++ .+|+.++.+ ..+..||+.+.+-.
T Consensus 52 g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~ 124 (353)
T 3vgz_A 52 ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN--DLKPFGATINNTTQTLWFGNTVN-----SAVTAIDAKTGEVK 124 (353)
T ss_dssp TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE--SSCCCSEEEETTTTEEEEEETTT-----TEEEEEETTTCCEE
T ss_pred CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec--CCCcceEEECCCCCEEEEEecCC-----CEEEEEeCCCCeeE
Confidence 45777765321 011245799999988865332222 1222344443 44 588876643 47999999988743
Q ss_pred e-cCCC-CCC-----cccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CC-EE
Q psy11333 364 C-DVAP-TTS-----CRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GG-FL 432 (482)
Q Consensus 364 ~-~~~~-~~~-----~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~i 432 (482)
. +... ... +....+++.. ++.+|+.+... ...++.||+.+.+-...-+. .......++.. ++ .+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l 199 (353)
T 3vgz_A 125 GRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAIQN-TGKMSTGLALDSEGKRL 199 (353)
T ss_dssp EEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEECC-CCTTCCCCEEETTTTEE
T ss_pred EEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEecC-CCCccceEEECCCCCEE
Confidence 2 2111 111 1111233332 35677776322 24689999987654332221 11112223333 44 56
Q ss_pred EEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 433 YAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 433 ~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
|+..+ + +.+.+||+.+.+
T Consensus 200 ~~~~~-~-----~~i~~~d~~~~~ 217 (353)
T 3vgz_A 200 YTTNA-D-----GELITIDTADNK 217 (353)
T ss_dssp EEECT-T-----SEEEEEETTTTE
T ss_pred EEEcC-C-----CeEEEEECCCCe
Confidence 66543 2 478889987664
No 95
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=94.27 E-value=1.8 Score=39.70 Aligned_cols=133 Identities=14% Similarity=0.194 Sum_probs=70.9
Q ss_pred eeEEEeCCCCCeeeccCCCCCCCc-eeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEE-
Q psy11333 304 SVERYDPQSSDWKIVAPMSKRRCG-VGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAV- 380 (482)
Q Consensus 304 ~~~~~d~~~~~W~~~~~~~~~~~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~- 380 (482)
.+..+|..+.+-... +...... .+++.. ++.+++.||.++ .+..||..+..-.........+ -.+++.
T Consensus 165 ~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d~-----~v~~wd~~~~~~~~~~~~h~~~--v~~v~~~ 235 (340)
T 1got_B 165 TCALWDIETGQQTTT--FTGHTGDVMSLSLAPDTRLFVSGACDA-----SAKLWDVREGMCRQTFTGHESD--INAICFF 235 (340)
T ss_dssp CEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCSEEEEECCCSSC--EEEEEEC
T ss_pred cEEEEECCCCcEEEE--EcCCCCceEEEEECCCCCEEEEEeCCC-----cEEEEECCCCeeEEEEcCCcCC--EEEEEEc
Confidence 577788877654321 1111111 222222 667888888663 6889999877543220111111 112222
Q ss_pred ECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE--CCEEEEEcCCCCCCCCCeEEEEeCCCC
Q psy11333 381 LDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL--GGFLYAIGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 381 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~y~~~~~ 455 (482)
-++..++.||.++ .+..||..+.+-...-..+........+.+ ++++++.|+.+ ..+.+||..+.
T Consensus 236 p~~~~l~s~s~d~-----~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-----~~i~vwd~~~~ 302 (340)
T 1got_B 236 PNGNAFATGSDDA-----TCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD-----FNCNVWDALKA 302 (340)
T ss_dssp TTSSEEEEEETTS-----CEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTC
T ss_pred CCCCEEEEEcCCC-----cEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCC-----CeEEEEEcccC
Confidence 2677888887653 577899877653222121111112222222 67888888765 46888887654
No 96
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=94.27 E-value=1.3 Score=40.78 Aligned_cols=147 Identities=12% Similarity=0.096 Sum_probs=80.0
Q ss_pred cEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE--C--CEEEEEecCCCCCCCCeEEEEeCCCCcee
Q psy11333 288 EVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--N--DLLYAVGGHDGQSYLNSIERYDPQTNQWS 363 (482)
Q Consensus 288 ~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 363 (482)
+.+++.|+.+ ..+..+|..+.+|.....+.........+.+ + +.+++.|+.+ ..+..||..+..-.
T Consensus 69 ~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~ 138 (379)
T 3jrp_A 69 GTILASCSYD-----GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKENGTT 138 (379)
T ss_dssp CSEEEEEETT-----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCTTSCC
T ss_pred CCEEEEeccC-----CEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC-----CcEEEEecCCCCce
Confidence 4556666532 3578889888887665544433333333333 3 6677777765 36889998876422
Q ss_pred ecCCCCC-CcccceeEEEE--------------CCEEEEEeccCCCcccCeEEEEeCCCC--ceeecCCCCCCcc-ceEE
Q psy11333 364 CDVAPTT-SCRTSVGVAVL--------------DGFLYAVGGQDGVQCLNHVERYDPKEN--KWSRVAPMTTRRL-GVAV 425 (482)
Q Consensus 364 ~~~~~~~-~~r~~~~~~~~--------------~~~lyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~r~-~~~~ 425 (482)
.. ..+. ....-.++... ++..++.|+.++ .+..||..+. .|..+..+..... ..++
T Consensus 139 ~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~ 212 (379)
T 3jrp_A 139 SP-IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHSDWVRDV 212 (379)
T ss_dssp CE-EEEECCTTCEEEEEECCCC----------CTTCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred ee-EEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC-----eEEEEEecCCCcceeeEEEEecccCcEeEE
Confidence 11 0000 01111122222 477888887654 4777877544 3444433322222 2223
Q ss_pred EEE-C---CEEEEEcCCCCCCCCCeEEEEeCCCC
Q psy11333 426 AVL-G---GFLYAIGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 426 ~~~-~---~~i~v~GG~~~~~~~~~~~~y~~~~~ 455 (482)
+.. + +.+++.|+.++ .+.+||..+.
T Consensus 213 ~~sp~~~~~~~l~s~~~dg-----~i~iwd~~~~ 241 (379)
T 3jrp_A 213 AWSPTVLLRSYLASVSQDR-----TCIIWTQDNE 241 (379)
T ss_dssp EECCCCSSSEEEEEEETTS-----CEEEEEESST
T ss_pred EECCCCCCCCeEEEEeCCC-----EEEEEeCCCC
Confidence 322 4 68888888764 5778887654
No 97
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=94.25 E-value=1.2 Score=41.92 Aligned_cols=134 Identities=16% Similarity=0.224 Sum_probs=75.6
Q ss_pred ceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEE
Q psy11333 303 SSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVL 381 (482)
Q Consensus 303 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~ 381 (482)
..+..+|..+.+............-.+++.. ++...++|+.++ .+..||..+.+...... ..........+
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~---~~~~~v~~~~~ 184 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNG-----LVDIYDVESQTKLRTMA---GHQARVGCLSW 184 (401)
T ss_dssp TEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEEEEC---CCSSCEEEEEE
T ss_pred CeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCC-----eEEEEECcCCeEEEEec---CCCCceEEEEE
Confidence 3689999998887654443322222233332 667777777653 68999998876543312 11222333444
Q ss_pred CCEEEEEeccCCCcccCeEEEEeCCCCce--eecCCCCCCccceEEEEE-CCEEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 382 DGFLYAVGGQDGVQCLNHVERYDPKENKW--SRVAPMTTRRLGVAVAVL-GGFLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 382 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W--~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
++.+++.|+.+ ..+..||..+..- ..+.. ......++... ++..++.|+.++ .+.+||..+.+
T Consensus 185 ~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~ 250 (401)
T 4aez_A 185 NRHVLSSGSRS-----GAIHHHDVRIANHQIGTLQG--HSSEVCGLAWRSDGLQLASGGNDN-----VVQIWDARSSI 250 (401)
T ss_dssp ETTEEEEEETT-----SEEEEEETTSSSCEEEEEEC--CSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTCSS
T ss_pred CCCEEEEEcCC-----CCEEEEecccCcceeeEEcC--CCCCeeEEEEcCCCCEEEEEeCCC-----eEEEccCCCCC
Confidence 77778888754 3678888874321 11111 11112222222 677888887653 57888877543
No 98
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.20 E-value=1.7 Score=45.31 Aligned_cols=138 Identities=10% Similarity=0.043 Sum_probs=80.7
Q ss_pred ceeEEEeCCCCCeeeccCCC---CCCCce-eEEE-ECCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccc-e
Q psy11333 303 SSVERYDPQSSDWKIVAPMS---KRRCGV-GVAV-LNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTS-V 376 (482)
Q Consensus 303 ~~~~~~d~~~~~W~~~~~~~---~~~~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~-~ 376 (482)
.-+++||+.+++|......+ .+.... +++. -+|.|++.. .. .-+.+||+.+++|+....+...+-.. .
T Consensus 469 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~~-----~Gl~~~~~~~~~~~~~~~~~~l~~~~i~ 542 (781)
T 3v9f_A 469 AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGT-FG-----GGVGIYTPDMQLVRKFNQYEGFCSNTIN 542 (781)
T ss_dssp TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEE-SS-----SCEEEECTTCCEEEEECTTTTCSCSCEE
T ss_pred CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEE-cC-----CCEEEEeCCCCeEEEccCCCCCCCCeeE
Confidence 35889999999887654322 111112 2222 256777643 21 23889999999998772211111111 2
Q ss_pred eEEE-ECCEEEEEeccCCCcccCeE-EEEeCCCCceeecC---CCCCCccceEEEEE-CCEEEEEcCCCCCCCCCeEEEE
Q psy11333 377 GVAV-LDGFLYAVGGQDGVQCLNHV-ERYDPKENKWSRVA---PMTTRRLGVAVAVL-GGFLYAIGGSDGQSPLNTVERF 450 (482)
Q Consensus 377 ~~~~-~~~~lyv~GG~~~~~~~~~~-~~yd~~~~~W~~~~---~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~y 450 (482)
++.. .+|.||+... ..+ .+||+.++++.... .+|.... .+++.- +|.|++.+. +-+.+|
T Consensus 543 ~i~~d~~g~lWi~T~-------~Glv~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~-------~Gl~~~ 607 (781)
T 3v9f_A 543 QIYRSSKGQMWLATG-------EGLVCFPSARNFDYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN-------TGISCY 607 (781)
T ss_dssp EEEECTTSCEEEEET-------TEEEEESCTTTCCCEEECGGGTCSCCCC-CEEEECSSSCEEEECS-------SCEEEE
T ss_pred EEEECCCCCEEEEEC-------CCceEEECCCCCcEEEccccCCCCCceE-EEEEECCCCCEEEEcC-------CceEEE
Confidence 2222 3578887642 235 88999988877654 3443333 233333 678888753 248899
Q ss_pred eCCCCceeecC
Q psy11333 451 DPKLNRWTAMA 461 (482)
Q Consensus 451 ~~~~~~W~~~~ 461 (482)
||++.++....
T Consensus 608 ~~~~~~~~~~~ 618 (781)
T 3v9f_A 608 ITSKKCFYTYD 618 (781)
T ss_dssp ETTTTEEEEEC
T ss_pred ECCCCceEEec
Confidence 99988887764
No 99
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=94.18 E-value=0.93 Score=41.35 Aligned_cols=146 Identities=16% Similarity=0.174 Sum_probs=76.2
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEE-ECCEEEEEecCCCCCCCCeEEEEeCCCCceeec
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAV-LNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCD 365 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 365 (482)
++..++.|+.. ..+..||..+.+-...-.. ....-.+++. -+++..+.|+.++ .+..||..+.+-...
T Consensus 133 dg~~l~~g~~d-----g~v~i~~~~~~~~~~~~~~-~~~~v~~~~~spdg~~lasg~~dg-----~i~iwd~~~~~~~~~ 201 (321)
T 3ow8_A 133 DSQYLATGTHV-----GKVNIFGVESGKKEYSLDT-RGKFILSIAYSPDGKYLASGAIDG-----IINIFDIATGKLLHT 201 (321)
T ss_dssp TSSEEEEECTT-----SEEEEEETTTCSEEEEEEC-SSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEE
T ss_pred CCCEEEEEcCC-----CcEEEEEcCCCceeEEecC-CCceEEEEEECCCCCEEEEEcCCC-----eEEEEECCCCcEEEE
Confidence 45555555432 3567777776653221111 1111122222 2677778887653 688999988764322
Q ss_pred CCCCCCcccceeEE-EECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCEEEEEcCCCCCCC
Q psy11333 366 VAPTTSCRTSVGVA-VLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGFLYAIGGSDGQSP 443 (482)
Q Consensus 366 ~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~ 443 (482)
......+. .+++ .-++++++.|+.++ .+..||..+.+....-.- .......++.. ++..++.|+.++
T Consensus 202 ~~~h~~~v--~~l~~spd~~~l~s~s~dg-----~i~iwd~~~~~~~~~~~~-h~~~v~~~~~sp~~~~l~s~s~D~--- 270 (321)
T 3ow8_A 202 LEGHAMPI--RSLTFSPDSQLLVTASDDG-----YIKIYDVQHANLAGTLSG-HASWVLNVAFCPDDTHFVSSSSDK--- 270 (321)
T ss_dssp ECCCSSCC--CEEEECTTSCEEEEECTTS-----CEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTS---
T ss_pred EcccCCce--eEEEEcCCCCEEEEEcCCC-----eEEEEECCCcceeEEEcC-CCCceEEEEECCCCCEEEEEeCCC---
Confidence 01111111 1222 23677888887643 578899876654322111 11111222222 677788887763
Q ss_pred CCeEEEEeCCCCc
Q psy11333 444 LNTVERFDPKLNR 456 (482)
Q Consensus 444 ~~~~~~y~~~~~~ 456 (482)
.+.+||..+.+
T Consensus 271 --~v~iwd~~~~~ 281 (321)
T 3ow8_A 271 --SVKVWDVGTRT 281 (321)
T ss_dssp --CEEEEETTTTE
T ss_pred --cEEEEeCCCCE
Confidence 58888887554
No 100
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=94.15 E-value=0.0064 Score=50.41 Aligned_cols=76 Identities=14% Similarity=0.232 Sum_probs=53.2
Q ss_pred HHHHHHhcCCCCcCccceEEE-ccCCHHHHHHHHHHhhcCee-eeccccHhhHHHHhcccChhhHHHHHHHHHhccCC
Q psy11333 61 PYFRAMFTGELAESRQAEVTI-RDIDDVAMDNLIEFCYTSHI-TVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLD 136 (482)
Q Consensus 61 ~~F~~~~~~~~~e~~~~~i~l-~~~~~~~~~~~l~~~y~~~~-~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i~~~~~ 136 (482)
.+++.+|++.......+...+ ...+...+..+.+.|-.... .++.+||..++.+|+.+++++|++.|.++|.+++.
T Consensus 88 ~~l~~~Yt~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~ 165 (172)
T 3htm_A 88 EMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHAT 165 (172)
T ss_dssp HHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred HHHHHHhCCCCCCcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 456788888876554443222 22223334555555544432 57889999999999999999999999999999886
No 101
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=94.15 E-value=2.3 Score=40.62 Aligned_cols=138 Identities=14% Similarity=0.218 Sum_probs=71.9
Q ss_pred eeEEEeCCCCCeeeccCCCCCCCceeEEEECCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEECC
Q psy11333 304 SVERYDPQSSDWKIVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDG 383 (482)
Q Consensus 304 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~ 383 (482)
.+..||..+.+-.. .+............++..++.|+.+ ..+..||..+.+-..................+++
T Consensus 300 ~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 372 (445)
T 2ovr_B 300 SIRVWDVETGNCIH--TLTGHQSLTSGMELKDNILVSGNAD-----STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK 372 (445)
T ss_dssp CEEEEETTTCCEEE--EECCCCSCEEEEEEETTEEEEEETT-----SCEEEEETTTCCEEEEECSTTSCSSCEEEEEECS
T ss_pred eEEEEECCCCCEEE--EEcCCcccEEEEEEeCCEEEEEeCC-----CeEEEEECCCCcEEEEEccCCCCCCCEEEEEECC
Confidence 46667766654321 1111122223334456677777755 3689999987764322011111222233445577
Q ss_pred EEEEEeccCCCcccCeEEEEeCCCCceeecC-CC---CCCccceEEEEE-CCEEEEEcCCCCCCCCCeEEEEeCCC
Q psy11333 384 FLYAVGGQDGVQCLNHVERYDPKENKWSRVA-PM---TTRRLGVAVAVL-GGFLYAIGGSDGQSPLNTVERFDPKL 454 (482)
Q Consensus 384 ~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~---~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~y~~~~ 454 (482)
..++.||.++ .+..||..+.+....- .. +..-...+++.. ++.+++.|+.++. ....+.+||.+.
T Consensus 373 ~~l~s~~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~-~~~~l~v~df~~ 442 (445)
T 2ovr_B 373 NFVITSSDDG-----TVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT-EETKLLVLDFDV 442 (445)
T ss_dssp SEEEEEETTS-----EEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSS-SCCEEEEEECCC
T ss_pred CEEEEEeCCC-----eEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCC-CccEEEEEECCC
Confidence 8888887643 6888998877653321 11 111112222233 5567777777653 224577887654
No 102
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.14 E-value=0.64 Score=42.46 Aligned_cols=155 Identities=11% Similarity=0.072 Sum_probs=83.0
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
.++.||+.+... ..+++||+.+.++....... ...-.+++.- ++.+|+.+..+. .....+++||+.+...+.
T Consensus 54 ~~g~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~~-~~~~~i~~~d~~~~~~~~ 126 (333)
T 2dg1_A 54 RQGQLFLLDVFE-----GNIFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGDF-KSTGGIFAATENGDNLQD 126 (333)
T ss_dssp TTSCEEEEETTT-----CEEEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTTS-SSCCEEEEECTTSCSCEE
T ss_pred CCCCEEEEECCC-----CEEEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCCC-CCCceEEEEeCCCCEEEE
Confidence 456788876421 46899999998876543211 1222334332 678888764321 112479999999887663
Q ss_pred cCCCCCCcccceeEEE-ECCEEEEEeccC-CCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CC-EEEEEcCCCC
Q psy11333 365 DVAPTTSCRTSVGVAV-LDGFLYAVGGQD-GVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GG-FLYAIGGSDG 440 (482)
Q Consensus 365 ~~~~~~~~r~~~~~~~-~~~~lyv~GG~~-~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~i~v~GG~~~ 440 (482)
+............++. -+|++|+..... .......+++||+.+.+...+..- .....+++.. ++ .||+....+
T Consensus 127 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~i~~~~dg~~l~v~~~~~- 203 (333)
T 2dg1_A 127 IIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--ISVANGIALSTDEKVLWVTETTA- 203 (333)
T ss_dssp EECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--ESSEEEEEECTTSSEEEEEEGGG-
T ss_pred EEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--CCcccceEECCCCCEEEEEeCCC-
Confidence 3121221222222333 368888865321 111234689999887666554310 0111222222 44 477765322
Q ss_pred CCCCCeEEEEeCCC
Q psy11333 441 QSPLNTVERFDPKL 454 (482)
Q Consensus 441 ~~~~~~~~~y~~~~ 454 (482)
+.+++||+.+
T Consensus 204 ----~~i~~~d~~~ 213 (333)
T 2dg1_A 204 ----NRLHRIALED 213 (333)
T ss_dssp ----TEEEEEEECT
T ss_pred ----CeEEEEEecC
Confidence 4678888753
No 103
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=94.12 E-value=1.1 Score=42.75 Aligned_cols=159 Identities=13% Similarity=0.006 Sum_probs=84.8
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCE-EEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDL-LYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
++..+++++... ....++.+|..+.+...+...+. ...+.+.. +++ |++.+..++ ...++.||..+++...
T Consensus 189 dg~~la~~s~~~--~~~~i~~~d~~tg~~~~l~~~~~--~~~~~~~spdg~~la~~~~~~g---~~~i~~~d~~~~~~~~ 261 (415)
T 2hqs_A 189 DGSKLAYVTFES--GRSALVIQTLANGAVRQVASFPR--HNGAPAFSPDGSKLAFALSKTG---SLNLYVMDLASGQIRQ 261 (415)
T ss_dssp TSSEEEEEECTT--SSCEEEEEETTTCCEEEEECCSS--CEEEEEECTTSSEEEEEECTTS---SCEEEEEETTTCCEEE
T ss_pred CCCEEEEEEecC--CCcEEEEEECCCCcEEEeecCCC--cccCEEEcCCCCEEEEEEecCC---CceEEEEECCCCCEEe
Confidence 444444444322 22578999999988765544322 11222222 554 555554332 3469999999988776
Q ss_pred cCCCCCCcccceeEE-EECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCEEEEEcCCCCCC
Q psy11333 365 DVAPTTSCRTSVGVA-VLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGFLYAIGGSDGQS 442 (482)
Q Consensus 365 ~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~ 442 (482)
+ ...+.. ..+.. .-+|+.+++++..+. ...++.+|+.+.+-..+... .......+.. +|+.+++++..+.
T Consensus 262 l-~~~~~~--~~~~~~spdg~~l~~~s~~~g--~~~i~~~d~~~~~~~~l~~~--~~~~~~~~~spdG~~l~~~~~~~g- 333 (415)
T 2hqs_A 262 V-TDGRSN--NTEPTWFPDSQNLAFTSDQAG--RPQVYKVNINGGAPQRITWE--GSQNQDADVSSDGKFMVMVSSNGG- 333 (415)
T ss_dssp C-CCCSSC--EEEEEECTTSSEEEEEECTTS--SCEEEEEETTSSCCEECCCS--SSEEEEEEECTTSSEEEEEEECSS-
T ss_pred C-cCCCCc--ccceEECCCCCEEEEEECCCC--CcEEEEEECCCCCEEEEecC--CCcccCeEECCCCCEEEEEECcCC-
Confidence 6 332211 11222 225665555443221 24789999987765444321 1222222222 5654444443211
Q ss_pred CCCeEEEEeCCCCceeecC
Q psy11333 443 PLNTVERFDPKLNRWTAMA 461 (482)
Q Consensus 443 ~~~~~~~y~~~~~~W~~~~ 461 (482)
...++++|+.+.+...+.
T Consensus 334 -~~~i~~~d~~~~~~~~l~ 351 (415)
T 2hqs_A 334 -QQHIAKQDLATGGVQVLS 351 (415)
T ss_dssp -CEEEEEEETTTCCEEECC
T ss_pred -ceEEEEEECCCCCEEEec
Confidence 257999999888776654
No 104
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=94.08 E-value=3.4 Score=37.60 Aligned_cols=151 Identities=15% Similarity=0.098 Sum_probs=78.6
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCC--------CceeEEEE--CCEEEEEecCCCCCCCCeEEEEe
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRR--------CGVGVAVL--NDLLYAVGGHDGQSYLNSIERYD 356 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~--------~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd 356 (482)
++.+|+.++.. ..++.+|+.+.+-...-+..... ...+++.. ++.+|+.+... ...++.||
T Consensus 100 g~~l~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d 170 (353)
T 3vgz_A 100 TQTLWFGNTVN-----SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVD 170 (353)
T ss_dssp TTEEEEEETTT-----TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEE
T ss_pred CCEEEEEecCC-----CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEc
Confidence 34577776522 47899999887743221111111 11333343 45677776322 24699999
Q ss_pred CCCCceeecCCCCCCcccceeEEE-E-CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCC-C-Ccc-ceEEEEE--C
Q psy11333 357 PQTNQWSCDVAPTTSCRTSVGVAV-L-DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMT-T-RRL-GVAVAVL--G 429 (482)
Q Consensus 357 ~~~~~W~~~~~~~~~~r~~~~~~~-~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~-~-~r~-~~~~~~~--~ 429 (482)
+.+.+-....+... ....+++. - ++.+|+... ...+..||+.+.+-......+ . +.. ..+++.. +
T Consensus 171 ~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg 242 (353)
T 3vgz_A 171 GGNIKLKTAIQNTG--KMSTGLALDSEGKRLYTTNA------DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTAR 242 (353)
T ss_dssp TTTTEEEEEECCCC--TTCCCCEEETTTTEEEEECT------TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTT
T ss_pred CCCCceEEEecCCC--CccceEEECCCCCEEEEEcC------CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCC
Confidence 98876443312111 11122222 2 345666643 246788999877543322221 1 122 2233333 4
Q ss_pred CEEEEEcCCCCCCCCCeEEEEeCCCCceee
Q psy11333 430 GFLYAIGGSDGQSPLNTVERFDPKLNRWTA 459 (482)
Q Consensus 430 ~~i~v~GG~~~~~~~~~~~~y~~~~~~W~~ 459 (482)
+.+|+.+..+ +.+.+||+.+.+...
T Consensus 243 ~~l~~~~~~~-----~~v~~~d~~~~~~~~ 267 (353)
T 3vgz_A 243 QRAFITDSKA-----AEVLVVDTRNGNILA 267 (353)
T ss_dssp TEEEEEESSS-----SEEEEEETTTCCEEE
T ss_pred CEEEEEeCCC-----CEEEEEECCCCcEEE
Confidence 4677775432 579999998776433
No 105
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=94.03 E-value=4.7 Score=42.01 Aligned_cols=150 Identities=11% Similarity=0.111 Sum_probs=85.4
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCC-CCC-ceeEEE-ECCEEEEEecCCCCCCCCeEEEEeCCCCce
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSK-RRC-GVGVAV-LNDLLYAVGGHDGQSYLNSIERYDPQTNQW 362 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~-~~~-~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 362 (482)
.++.|++... .-+.+||+.+.+......... +.. -.+.+. -++.||+... +.+++||+.++++
T Consensus 97 ~~g~lWigT~-------~Gl~~yd~~~~~f~~~~~~~~~~~~~i~~i~~d~~g~lwi~t~-------~gl~~~~~~~~~~ 162 (795)
T 4a2l_A 97 SQGRVWIGTR-------DGLSRYDEEKDIFQNFFYEKNGKHLQVNGIEEISPEQLLISTP-------EGLIMFDIKESKF 162 (795)
T ss_dssp TTSCEEEEES-------SCEEEEETTTTEEEEECCEETTEECCCCEEEEEETTEEEEEET-------TEEEEEETTTTEE
T ss_pred CCCCEEEEeC-------CchheeCCCCCeEEeccccccCCCceEEEEEECCCCCEEEEEC-------CceEEEECCCCEE
Confidence 3567776432 347899999988866543211 111 122323 3778887542 3589999999988
Q ss_pred eecCCCCCCcccceeEE-EECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEE-EECCEEEEEcCCCC
Q psy11333 363 SCDVAPTTSCRTSVGVA-VLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVA-VLGGFLYAIGGSDG 440 (482)
Q Consensus 363 ~~~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~-~~~~~i~v~GG~~~ 440 (482)
+......+....-.++. ..+|.+|+.. .+ ..+.+||+.++++......+......++. --+|.|++....
T Consensus 163 ~~~~~~~~~~~~i~~i~~d~~g~lwigt-~~-----~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~-- 234 (795)
T 4a2l_A 163 IDDSFSTAMHKTIASTLYRQGDQIYIGT-ST-----DGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVATEG-- 234 (795)
T ss_dssp ECSSSCHHHHTCCEEEEEEETTEEEEEE-SS-----SCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEEBS--
T ss_pred EeccCCCCCCcceEEEEECCCCCEEEEE-CC-----CCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEECC--
Confidence 76622111111012233 2478998842 11 24889999999988764333222222232 237788875422
Q ss_pred CCCCCeEEEEeCCCCceeecC
Q psy11333 441 QSPLNTVERFDPKLNRWTAMA 461 (482)
Q Consensus 441 ~~~~~~~~~y~~~~~~W~~~~ 461 (482)
+-+++||+.++++....
T Consensus 235 ----~Gl~~~~~~~~~~~~~~ 251 (795)
T 4a2l_A 235 ----AGLFLINPKTKEIKNYL 251 (795)
T ss_dssp ----SCEEEEETTTTEEEEEC
T ss_pred ----CCeEEEeCCCCeEEEee
Confidence 23889999888887664
No 106
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=93.97 E-value=2.1 Score=42.96 Aligned_cols=121 Identities=11% Similarity=0.158 Sum_probs=69.6
Q ss_pred CCCCCcEEEEeccccCCCCCceeEEEeC-CCC--CeeeccCCCC-----C---CCceeEEE--ECCE----EEEEecCCC
Q psy11333 283 PSRRGEVLFAVGGWCSGDAISSVERYDP-QSS--DWKIVAPMSK-----R---RCGVGVAV--LNDL----LYAVGGHDG 345 (482)
Q Consensus 283 ~~~~~~~l~~~GG~~~~~~~~~~~~~d~-~~~--~W~~~~~~~~-----~---~~~~~~~~--~~~~----iyv~GG~~~ 345 (482)
.++.++.||+.+.. ...++++|. .+. .|+.-...+. . ....+.++ .++. ||+... +
T Consensus 58 P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-d- 130 (599)
T 1w6s_A 58 PLVVDGKMYIHTSF-----PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL-D- 130 (599)
T ss_dssp CEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-T-
T ss_pred cEEECCEEEEEeCC-----CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-C-
Confidence 34568899988652 246899999 676 4876443321 1 11223455 5777 887543 2
Q ss_pred CCCCCeEEEEeCCCCc--eeecCCCCCCc-ccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCC--ceeecC
Q psy11333 346 QSYLNSIERYDPQTNQ--WSCDVAPTTSC-RTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKEN--KWSRVA 414 (482)
Q Consensus 346 ~~~~~~~~~yd~~~~~--W~~~~~~~~~~-r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~ 414 (482)
..++++|..+.+ |+.-....... ....+-++.+++||+..+.........+..||..+. .|+.-.
T Consensus 131 ----g~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 131 ----GNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp ----SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred ----CEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 468999998886 88541211111 111233456888886543211112357899999876 486543
No 107
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=93.96 E-value=0.38 Score=44.04 Aligned_cols=154 Identities=18% Similarity=0.176 Sum_probs=79.7
Q ss_pred CCCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CC-EEEEEecCCCCCCCCeEEEEeCCCCce
Q psy11333 285 RRGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-ND-LLYAVGGHDGQSYLNSIERYDPQTNQW 362 (482)
Q Consensus 285 ~~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W 362 (482)
..++.+|+.++.. ..++.+|+.+.+....-+.+.....++++.. ++ .+|+.++.+ ..+.+||+.+.+-
T Consensus 8 ~~~~~~~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~-----~~i~~~d~~t~~~ 77 (349)
T 1jmx_B 8 KAGHEYMIVTNYP-----NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY-----GDIYGIDLDTCKN 77 (349)
T ss_dssp CTTCEEEEEEETT-----TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTT-----TEEEEEETTTTEE
T ss_pred cCCCEEEEEeCCC-----CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCC-----CcEEEEeCCCCcE
Confidence 3467888887632 5789999998876433222221122344443 44 577776432 4799999998875
Q ss_pred eecCCCCCC-----cccceeEEEE-CC-EEEEEecc---CCC---cccCeEEEEeCCCCceee-cCCCCCCccceEEEE-
Q psy11333 363 SCDVAPTTS-----CRTSVGVAVL-DG-FLYAVGGQ---DGV---QCLNHVERYDPKENKWSR-VAPMTTRRLGVAVAV- 427 (482)
Q Consensus 363 ~~~~~~~~~-----~r~~~~~~~~-~~-~lyv~GG~---~~~---~~~~~~~~yd~~~~~W~~-~~~~~~~r~~~~~~~- 427 (482)
... ...+. .....+++.. +| .+|+.+.. ... .....+..||+.+.+-.. +...+.++...+++.
T Consensus 78 ~~~-~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 156 (349)
T 1jmx_B 78 TFH-ANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAA 156 (349)
T ss_dssp EEE-EESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEEC
T ss_pred EEE-EEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeEC
Confidence 432 11111 1111233332 45 45554421 000 012578999987643211 111122222333333
Q ss_pred ECCEEEEEcCCCCCCCCCeEEEEeCCCCce
Q psy11333 428 LGGFLYAIGGSDGQSPLNTVERFDPKLNRW 457 (482)
Q Consensus 428 ~~~~i~v~GG~~~~~~~~~~~~y~~~~~~W 457 (482)
-++++|+.++ ++++||+.+.+-
T Consensus 157 ~dg~l~~~~~--------~i~~~d~~~~~~ 178 (349)
T 1jmx_B 157 DDGSLYVAGP--------DIYKMDVKTGKY 178 (349)
T ss_dssp TTSCEEEESS--------SEEEECTTTCCE
T ss_pred CCCcEEEccC--------cEEEEeCCCCce
Confidence 3667777532 388898876654
No 108
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=93.94 E-value=3.6 Score=39.32 Aligned_cols=134 Identities=10% Similarity=0.096 Sum_probs=75.2
Q ss_pred eeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEEC
Q psy11333 304 SVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLD 382 (482)
Q Consensus 304 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~ 382 (482)
.+..||..+.+-...-... ...-.+++.. ++...+.|+.++ .+..||..+.+-... +...........++
T Consensus 291 ~i~vwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~sg~~dg-----~i~vwd~~~~~~~~~---~~~h~~~v~~~~~~ 361 (464)
T 3v7d_B 291 TLIVWDVAQMKCLYILSGH-TDRIYSTIYDHERKRCISASMDT-----TIRIWDLENGELMYT---LQGHTALVGLLRLS 361 (464)
T ss_dssp CEEEEETTTTEEEEEECCC-SSCEEEEEEETTTTEEEEEETTS-----CEEEEETTTTEEEEE---ECCCSSCEEEEEEC
T ss_pred eEEEEECCCCcEEEEecCC-CCCEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCcEEEE---EeCCCCcEEEEEEc
Confidence 5788888776542211111 1111222332 566777777653 689999988764322 11122223344556
Q ss_pred CEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCCcee
Q psy11333 383 GFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLNRWT 458 (482)
Q Consensus 383 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~~W~ 458 (482)
+..++.|+.++ .+..||+.+..-..... ............++.+++.|+ + +.+.+||..+.+-.
T Consensus 362 ~~~l~s~s~dg-----~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-d-----g~i~iwd~~~g~~~ 425 (464)
T 3v7d_B 362 DKFLVSAAADG-----SIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-E-----NQFNIYNLRSGKLV 425 (464)
T ss_dssp SSEEEEEETTS-----EEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE-T-----TEEEEEETTTCCEE
T ss_pred CCEEEEEeCCC-----cEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec-C-----CeEEEEECCCCcEE
Confidence 77788887643 58889988654322221 112223334455777777776 3 47999999877643
No 109
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=93.83 E-value=0.75 Score=42.12 Aligned_cols=153 Identities=16% Similarity=0.224 Sum_probs=79.5
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCC--CCeeeccCCCCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCce
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQS--SDWKIVAPMSKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQW 362 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~--~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 362 (482)
++..++.|+.+ ..+..+|... ..++.+..+.........+.+ ++.+++.||.++ ++..||..+..|
T Consensus 118 ~g~~las~s~D-----~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~-----~i~iW~~~~~~~ 187 (330)
T 2hes_X 118 DGYYLATCSRD-----KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD-----TVRIWKDYDDDW 187 (330)
T ss_dssp TSCEEEEEETT-----SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS-----CEEEEEEETTEE
T ss_pred CCCEEEEEeCC-----CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC-----eEEEEECCCCCe
Confidence 45556666532 3567777732 344433333222222222333 667778888663 688899888777
Q ss_pred eecCCCCCCcccc-eeEEEE-C--CEEEEEeccCCCcccCeEEEEeCCC------CceeecCCCC--CCccceEEEEECC
Q psy11333 363 SCDVAPTTSCRTS-VGVAVL-D--GFLYAVGGQDGVQCLNHVERYDPKE------NKWSRVAPMT--TRRLGVAVAVLGG 430 (482)
Q Consensus 363 ~~~~~~~~~~r~~-~~~~~~-~--~~lyv~GG~~~~~~~~~~~~yd~~~------~~W~~~~~~~--~~r~~~~~~~~~~ 430 (482)
+.+ ..+...... .++... + +..++.||.++ .+..||..+ ..|.....++ ......+++..++
T Consensus 188 ~~~-~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~-----~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~ 261 (330)
T 2hes_X 188 ECV-AVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS-----TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFN 261 (330)
T ss_dssp EEE-EEECCCSSCEEEEEECCSSSSCEEEEEETTS-----CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTT
T ss_pred eEE-EEccCCCCcEEEEEecCCCCeeEEEEEeCCC-----eEEEEEecCCCccccceeEEeeecccccccceEEEEEcCC
Confidence 654 222211111 122222 2 45667777543 355555432 2455444333 2223333443455
Q ss_pred EEEEEcCCCCCCCCCeEEEEeCCCCceeec
Q psy11333 431 FLYAIGGSDGQSPLNTVERFDPKLNRWTAM 460 (482)
Q Consensus 431 ~i~v~GG~~~~~~~~~~~~y~~~~~~W~~~ 460 (482)
.+++.||.+ +.+.+||..+.+|..+
T Consensus 262 ~~l~s~~~d-----g~v~iw~~~~~~~~~~ 286 (330)
T 2hes_X 262 GLIASVGAD-----GVLAVYEEVDGEWKVF 286 (330)
T ss_dssp SCEEEEETT-----SCEEEEEEETTEEEEE
T ss_pred CEEEEEeCC-----CEEEEEEcCCCceEEE
Confidence 567777765 3688888888778654
No 110
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=93.83 E-value=1.5 Score=39.95 Aligned_cols=144 Identities=13% Similarity=0.132 Sum_probs=75.5
Q ss_pred cEEEEeccccCCCCCceeEEEeCCCCCeee-ccCCCCCCCceeEEE-ECCEEEEEecCCCCCCCCeEEEEeCCCCceeec
Q psy11333 288 EVLFAVGGWCSGDAISSVERYDPQSSDWKI-VAPMSKRRCGVGVAV-LNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCD 365 (482)
Q Consensus 288 ~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~-~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 365 (482)
+.+.+.|+.+ ..+..+|..+.+-.. +..-+. ...+++. -++...+.|+.+ ..+..||..+.+-...
T Consensus 92 ~~~l~s~s~D-----~~i~lWd~~~~~~~~~~~~~~~--~~~~~~~spdg~~l~~g~~d-----g~v~i~~~~~~~~~~~ 159 (321)
T 3ow8_A 92 LPIAASSSLD-----AHIRLWDLENGKQIKSIDAGPV--DAWTLAFSPDSQYLATGTHV-----GKVNIFGVESGKKEYS 159 (321)
T ss_dssp SSEEEEEETT-----SEEEEEETTTTEEEEEEECCTT--CCCCEEECTTSSEEEEECTT-----SEEEEEETTTCSEEEE
T ss_pred CCEEEEEeCC-----CcEEEEECCCCCEEEEEeCCCc--cEEEEEECCCCCEEEEEcCC-----CcEEEEEcCCCceeEE
Confidence 4455555432 367788887765422 111111 1122333 366777777754 3688999887753322
Q ss_pred CCCCCCcccceeEE-EECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEE-ECCEEEEEcCCCCCCC
Q psy11333 366 VAPTTSCRTSVGVA-VLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAV-LGGFLYAIGGSDGQSP 443 (482)
Q Consensus 366 ~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~ 443 (482)
... ....-.+++ .-+++.++.|+.++ .+..||..+.+-...-.-... ...+++. -++.+++.|+.++
T Consensus 160 ~~~--~~~~v~~~~~spdg~~lasg~~dg-----~i~iwd~~~~~~~~~~~~h~~-~v~~l~~spd~~~l~s~s~dg--- 228 (321)
T 3ow8_A 160 LDT--RGKFILSIAYSPDGKYLASGAIDG-----IINIFDIATGKLLHTLEGHAM-PIRSLTFSPDSQLLVTASDDG--- 228 (321)
T ss_dssp EEC--SSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEECCCSS-CCCEEEECTTSCEEEEECTTS---
T ss_pred ecC--CCceEEEEEECCCCCEEEEEcCCC-----eEEEEECCCCcEEEEEcccCC-ceeEEEEcCCCCEEEEEcCCC---
Confidence 011 111111222 23678888887653 578899887654322111111 1122222 2677888887653
Q ss_pred CCeEEEEeCCCCc
Q psy11333 444 LNTVERFDPKLNR 456 (482)
Q Consensus 444 ~~~~~~y~~~~~~ 456 (482)
.+.+||..+.+
T Consensus 229 --~i~iwd~~~~~ 239 (321)
T 3ow8_A 229 --YIKIYDVQHAN 239 (321)
T ss_dssp --CEEEEETTTCC
T ss_pred --eEEEEECCCcc
Confidence 57888876554
No 111
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=93.78 E-value=0.029 Score=42.61 Aligned_cols=84 Identities=14% Similarity=0.135 Sum_probs=61.1
Q ss_pred EEEEeCCeEEeceeEEeeccC-HHHHHHhcCCC-CcCccceEEEccCCHHHHHHHHHHhhcCeeeeccc-cHhhHHHHhc
Q psy11333 40 VVLNVGARKIFAHRVVLSACS-PYFRAMFTGEL-AESRQAEVTIRDIDDVAMDNLIEFCYTSHITVEES-NVQTLLPAAC 116 (482)
Q Consensus 40 v~i~~~~~~~~~hk~iL~~~S-~~F~~~~~~~~-~e~~~~~i~l~~~~~~~~~~~l~~~y~~~~~~~~~-~~~~ll~~a~ 116 (482)
|+|.|+|..|...+..|.... ..|..|+++.. .....+.+-| |-++..|..+|+|+.+|.+.++.+ ....+++-|+
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnylR~G~l~~p~~~~~~~~~~Ea~ 85 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRHPGVFAQIINYYRSGKLHYPTDVCGPLFEEELE 85 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHHHH
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE-ecChHHHHHHHHHhcCCCCCCCCcccHHHHHHHHH
Confidence 789999999999998887653 34566665432 1122334444 679999999999999998766554 3467888899
Q ss_pred ccChhhHH
Q psy11333 117 LLQLVEIQ 124 (482)
Q Consensus 117 ~~~~~~L~ 124 (482)
+|++++..
T Consensus 86 fy~i~~~~ 93 (115)
T 3kvt_A 86 FWGLDSNQ 93 (115)
T ss_dssp HHTCCGGG
T ss_pred HhCCChHH
Confidence 99987754
No 112
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=93.75 E-value=2.2 Score=39.37 Aligned_cols=133 Identities=17% Similarity=0.217 Sum_probs=71.6
Q ss_pred ceeEEEeCCCCCeeeccCCCCCCCce-eEEEE---CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeE
Q psy11333 303 SSVERYDPQSSDWKIVAPMSKRRCGV-GVAVL---NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGV 378 (482)
Q Consensus 303 ~~~~~~d~~~~~W~~~~~~~~~~~~~-~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~ 378 (482)
..+..+|..+.+.... +....... ++... ++..++.||.++ .+..||..+.+......... .....
T Consensus 176 ~~v~lwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg-----~v~~wd~~~~~~~~~~~~h~---~~v~~ 245 (354)
T 2pbi_B 176 GTCALWDVESGQLLQS--FHGHGADVLCLDLAPSETGNTFVSGGCDK-----KAMVWDMRSGQCVQAFETHE---SDVNS 245 (354)
T ss_dssp SEEEEEETTTCCEEEE--EECCSSCEEEEEECCCSSCCEEEEEETTS-----CEEEEETTTCCEEEEECCCS---SCEEE
T ss_pred CcEEEEeCCCCeEEEE--EcCCCCCeEEEEEEeCCCCCEEEEEeCCC-----eEEEEECCCCcEEEEecCCC---CCeEE
Confidence 3577888877664221 11111111 12221 356788888664 68999998887543311111 11222
Q ss_pred EEE--CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE--CCEEEEEcCCCCCCCCCeEEEEeCCC
Q psy11333 379 AVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL--GGFLYAIGGSDGQSPLNTVERFDPKL 454 (482)
Q Consensus 379 ~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~y~~~~ 454 (482)
+.+ ++..++.||.++ .+..||..+.+-...-...........+.+ ++.+++.|+.+ ..+.+||..+
T Consensus 246 v~~~p~~~~l~s~s~D~-----~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d-----~~i~vwd~~~ 315 (354)
T 2pbi_B 246 VRYYPSGDAFASGSDDA-----TCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYND-----YTINVWDVLK 315 (354)
T ss_dssp EEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT-----SCEEEEETTT
T ss_pred EEEeCCCCEEEEEeCCC-----eEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECC-----CcEEEEECCC
Confidence 222 577888887653 577899877653322222222222223333 67777777765 3688888765
Q ss_pred C
Q psy11333 455 N 455 (482)
Q Consensus 455 ~ 455 (482)
.
T Consensus 316 ~ 316 (354)
T 2pbi_B 316 G 316 (354)
T ss_dssp C
T ss_pred C
Confidence 4
No 113
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.74 E-value=2 Score=44.57 Aligned_cols=140 Identities=11% Similarity=0.143 Sum_probs=76.1
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCC-CCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCce
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKR-RCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQW 362 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~-~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 362 (482)
.++.|+++||.. .-+.+||+.++++.....-... .....+... +|.|++. .. .-+.+|||.++++
T Consensus 481 ~~g~lWi~~~t~-----~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWig-t~------~Gl~~~~~~~~~~ 548 (758)
T 3ott_A 481 NEGNVWVLLYNN-----KGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVG-FH------GGVMRINPKDESQ 548 (758)
T ss_dssp TTSCEEEEETTC-----SSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEE-ET------TEEEEECC--CCC
T ss_pred CCCCEEEEccCC-----CCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEE-ec------CceEEEecCCCce
Confidence 357788855422 3488999999998775421111 111222222 5678864 32 2489999999988
Q ss_pred eecC-CCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCEEEEEcCCCC
Q psy11333 363 SCDV-APTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGFLYAIGGSDG 440 (482)
Q Consensus 363 ~~~~-~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~ 440 (482)
+... ..++. ..-.++...+|.||+... +.+.+|||.+.+..... ++......++... +|.|| +||.+
T Consensus 549 ~~~~~~gl~~-~~i~~i~~~~g~lWi~t~-------~Gl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~G~l~-fG~~~- 617 (758)
T 3ott_A 549 QSISFGSFSN-NEILSMTCVKNSIWVSTT-------NGLWIIDRKTMDARQQN-MTNKRFTSLLFDPKEDCVY-LGGAD- 617 (758)
T ss_dssp CBCCCCC----CCEEEEEEETTEEEEEES-------SCEEEEETTTCCEEEC---CCCCCSEEEEETTTTEEE-EECBS-
T ss_pred EEecccCCCc-cceEEEEECCCCEEEECC-------CCeEEEcCCCceeEEec-CCCCceeeeEEECCCCcEE-EecCC-
Confidence 7651 12332 122344455889998753 35789999988766532 3333333222222 56665 45543
Q ss_pred CCCCCeEEEEeCC
Q psy11333 441 QSPLNTVERFDPK 453 (482)
Q Consensus 441 ~~~~~~~~~y~~~ 453 (482)
-+..|+|+
T Consensus 618 -----Gl~~f~p~ 625 (758)
T 3ott_A 618 -----GFGISHSN 625 (758)
T ss_dssp -----EEEEEEC-
T ss_pred -----ceEEEChh
Confidence 35666765
No 114
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=93.68 E-value=1.5 Score=41.76 Aligned_cols=145 Identities=9% Similarity=-0.001 Sum_probs=81.1
Q ss_pred ceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEE-
Q psy11333 303 SSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVA- 379 (482)
Q Consensus 303 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~- 379 (482)
..++.+|+.+.+...+..-. .......+ +++..++++... ....++.+|..+.+-+.+ ... .......+
T Consensus 247 ~~i~~~d~~~~~~~~l~~~~---~~~~~~~~spdg~~l~~~s~~~--g~~~i~~~d~~~~~~~~l-~~~--~~~~~~~~~ 318 (415)
T 2hqs_A 247 LNLYVMDLASGQIRQVTDGR---SNNTEPTWFPDSQNLAFTSDQA--GRPQVYKVNINGGAPQRI-TWE--GSQNQDADV 318 (415)
T ss_dssp CEEEEEETTTCCEEECCCCS---SCEEEEEECTTSSEEEEEECTT--SSCEEEEEETTSSCCEEC-CCS--SSEEEEEEE
T ss_pred ceEEEEECCCCCEEeCcCCC---CcccceEECCCCCEEEEEECCC--CCcEEEEEECCCCCEEEE-ecC--CCcccCeEE
Confidence 46899999988876554322 11222222 565444444221 134789999998876555 221 11112222
Q ss_pred EECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCEEEEEcCCCCCCCCCeEEEEeCCCCcee
Q psy11333 380 VLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGFLYAIGGSDGQSPLNTVERFDPKLNRWT 458 (482)
Q Consensus 380 ~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~y~~~~~~W~ 458 (482)
.-+|+.+++++..+. ...++.||+.+.+...+.... .....+.. +|+.+++++.++. ...++.+|...+...
T Consensus 319 spdG~~l~~~~~~~g--~~~i~~~d~~~~~~~~l~~~~---~~~~~~~spdg~~l~~~s~~~~--~~~l~~~d~~g~~~~ 391 (415)
T 2hqs_A 319 SSDGKFMVMVSSNGG--QQHIAKQDLATGGVQVLSSTF---LDETPSLAPNGTMVIYSSSQGM--GSVLNLVSTDGRFKA 391 (415)
T ss_dssp CTTSSEEEEEEECSS--CEEEEEEETTTCCEEECCCSS---SCEEEEECTTSSEEEEEEEETT--EEEEEEEETTSCCEE
T ss_pred CCCCCEEEEEECcCC--ceEEEEEECCCCCEEEecCCC---CcCCeEEcCCCCEEEEEEcCCC--ccEEEEEECCCCcEE
Confidence 235665555554321 257899999998887665432 22222222 6666666654321 247899999877666
Q ss_pred ecCC
Q psy11333 459 AMAP 462 (482)
Q Consensus 459 ~~~~ 462 (482)
.++.
T Consensus 392 ~l~~ 395 (415)
T 2hqs_A 392 RLPA 395 (415)
T ss_dssp ECCC
T ss_pred EeeC
Confidence 6543
No 115
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=93.64 E-value=0.79 Score=43.57 Aligned_cols=149 Identities=13% Similarity=0.061 Sum_probs=78.8
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
++.+++.|+.. ..+..||+.+.+....-. .....-.+++.. ++.+|+.|+.+ ..+.+||+.+.+...
T Consensus 180 ~~~~~~s~~~d-----~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~-----~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 180 HNELWVSQMQA-----NAVHVFDLKTLAYKATVD-LTGKWSKILLYDPIRDLVYCSNWIS-----EDISVIDRKTKLEIR 248 (433)
T ss_dssp GTEEEEEEGGG-----TEEEEEETTTCCEEEEEE-CSSSSEEEEEEETTTTEEEEEETTT-----TEEEEEETTTTEEEE
T ss_pred CCEEEEEECCC-----CEEEEEECCCceEEEEEc-CCCCCeeEEEEcCCCCEEEEEecCC-----CcEEEEECCCCcEEE
Confidence 56777777632 468899988765432111 111122233333 44577776543 379999999887654
Q ss_pred cCCCCCCcccceeEEE-ECCEEEEEeccCCCc---ccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CC-EEEEEcCC
Q psy11333 365 DVAPTTSCRTSVGVAV-LDGFLYAVGGQDGVQ---CLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GG-FLYAIGGS 438 (482)
Q Consensus 365 ~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~---~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~i~v~GG~ 438 (482)
. .+.. ..-.+++. -+++.+++++..... .-..+..||+.+.+-......+ .....++.. ++ .+|+.++.
T Consensus 249 ~-~~~~--~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~g~~l~~~~~~ 323 (433)
T 3bws_A 249 K-TDKI--GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPP--GNKRHIVSGNTENKIYVSDMC 323 (433)
T ss_dssp E-CCCC--SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEE--ECEEEEEECSSTTEEEEEETT
T ss_pred E-ecCC--CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCC--CCcceEEECCCCCEEEEEecC
Confidence 4 2221 11222222 245444454432211 1246889999877543332111 111122222 34 68888765
Q ss_pred CCCCCCCeEEEEeCCCCc
Q psy11333 439 DGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 439 ~~~~~~~~~~~y~~~~~~ 456 (482)
+ +.+.+||+.+.+
T Consensus 324 ~-----~~v~v~d~~~~~ 336 (433)
T 3bws_A 324 C-----SKIEVYDLKEKK 336 (433)
T ss_dssp T-----TEEEEEETTTTE
T ss_pred C-----CEEEEEECCCCc
Confidence 4 478899987654
No 116
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=93.60 E-value=0.78 Score=43.90 Aligned_cols=146 Identities=14% Similarity=0.054 Sum_probs=75.7
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCC-CCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCcee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMS-KRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQWS 363 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~-~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 363 (482)
++.+++.|+.. ..|..+|..+......-.+. ....-.+++.. ++.+++.||.++ ++.+||..++...
T Consensus 131 ~~~~lasGs~d-----g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~-----~v~iwd~~~~~~~ 200 (435)
T 4e54_B 131 HPSTVAVGSKG-----GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG-----TTRLQDFKGNILR 200 (435)
T ss_dssp CTTCEEEEETT-----SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS-----CEEEEETTSCEEE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC-----EEEEeeccCCcee
Confidence 45566777643 25778888776543332222 11111233332 566777787663 6889999888765
Q ss_pred ecCCCCCCcccceeEE-EECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE--CCEEEEEcCCCC
Q psy11333 364 CDVAPTTSCRTSVGVA-VLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL--GGFLYAIGGSDG 440 (482)
Q Consensus 364 ~~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~ 440 (482)
.....-.......++. .-++++++.|+.++ .+..||..+..-..+... .....+++.. ++.+++.|+.++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg-----~i~~wd~~~~~~~~~~~h--~~~v~~v~~~p~~~~~~~s~s~d~ 273 (435)
T 4e54_B 201 VFASSDTINIWFCSLDVSASSRMVVTGDNVG-----NVILLNMDGKELWNLRMH--KKKVTHVALNPCCDWFLATASVDQ 273 (435)
T ss_dssp EEECCSSCSCCCCCEEEETTTTEEEEECSSS-----BEEEEESSSCBCCCSBCC--SSCEEEEEECTTCSSEEEEEETTS
T ss_pred EEeccCCCCccEEEEEECCCCCEEEEEeCCC-----cEeeeccCcceeEEEecc--cceEEeeeecCCCceEEEEecCcc
Confidence 4411111111222333 33678888887644 577888765432222111 1111222222 335777777653
Q ss_pred CCCCCeEEEEeCCC
Q psy11333 441 QSPLNTVERFDPKL 454 (482)
Q Consensus 441 ~~~~~~~~~y~~~~ 454 (482)
.+.+||..+
T Consensus 274 -----~v~iwd~~~ 282 (435)
T 4e54_B 274 -----TVKIWDLRQ 282 (435)
T ss_dssp -----BCCEEETTT
T ss_pred -----eeeEEeccc
Confidence 456666543
No 117
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.60 E-value=0.74 Score=47.82 Aligned_cols=106 Identities=19% Similarity=0.198 Sum_probs=63.6
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE--C--CEEEEEecCCCCCCCCeEEEEeCCCCce
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--N--DLLYAVGGHDGQSYLNSIERYDPQTNQW 362 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~~~~~W 362 (482)
++..++.||.. ..+..||....++.....+.........+.+ + +...+.||.++ .+.+||..+++|
T Consensus 20 dg~~latg~~d-----g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg-----~I~vwd~~~~~~ 89 (753)
T 3jro_A 20 YGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG-----KVLIWKEENGRW 89 (753)
T ss_dssp SSCCEEEEETT-----TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS-----CEEEEEEETTEE
T ss_pred CCCeEEEEECC-----CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC-----eEEEEECCCCcc
Confidence 45566666532 3577888877777665554433333333333 3 67788888664 689999999988
Q ss_pred eecCCCCCCcccceeEEEE--C--CEEEEEeccCCCcccCeEEEEeCCCC
Q psy11333 363 SCDVAPTTSCRTSVGVAVL--D--GFLYAVGGQDGVQCLNHVERYDPKEN 408 (482)
Q Consensus 363 ~~~~~~~~~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~yd~~~~ 408 (482)
..+ ............+.+ + +.++++||.++ .+..||..+.
T Consensus 90 ~~~-~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg-----~I~vwdl~~~ 133 (753)
T 3jro_A 90 SQI-AVHAVHSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKEN 133 (753)
T ss_dssp EEE-EEECCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCSS
T ss_pred ccc-ccccCCCCCeEEEEECCCCCCCEEEEEeCCC-----cEEEEEeecC
Confidence 765 222222222222222 3 67888887543 5778888765
No 118
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=93.58 E-value=4.2 Score=36.99 Aligned_cols=153 Identities=16% Similarity=0.215 Sum_probs=87.1
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCC-------CCC-CCceeEEEE-C-CEEEEEecCCCCCCCCeEEEEe
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPM-------SKR-RCGVGVAVL-N-DLLYAVGGHDGQSYLNSIERYD 356 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~-------~~~-~~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~yd 356 (482)
++.+|+..++ ....+.+||+.......+... +.. ....++++- + +.|||....+ +.+.+||
T Consensus 154 ~g~lyv~d~~----~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~-----~~I~~~~ 224 (329)
T 3fvz_A 154 TGAVFVSDGY----CNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN-----GRIQCFK 224 (329)
T ss_dssp TCCEEEEECS----SCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT-----TEEEEEE
T ss_pred CCeEEEEeCC----CCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC-----CEEEEEE
Confidence 6889998752 125788999765544333211 111 123455554 4 8999987533 5799999
Q ss_pred CCCCceeecCCCCCCcccceeEEEECCEEEEEeccCC--CcccCeEEEEeCCCCceeecC-CCCCCcc-ceEEEEE-CCE
Q psy11333 357 PQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDG--VQCLNHVERYDPKENKWSRVA-PMTTRRL-GVAVAVL-GGF 431 (482)
Q Consensus 357 ~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~--~~~~~~~~~yd~~~~~W~~~~-~~~~~r~-~~~~~~~-~~~ 431 (482)
+.+.+...............+++...+.+|+..|... ......+..||+.+.+....- ..+.... ..++++- +|.
T Consensus 225 ~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~ 304 (329)
T 3fvz_A 225 TDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGT 304 (329)
T ss_dssp TTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSE
T ss_pred CCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCC
Confidence 9977765431212222222344445577787777421 223457889998877765442 1111122 2233333 678
Q ss_pred EEEEcCCCCCCCCCeEEEEeCC
Q psy11333 432 LYAIGGSDGQSPLNTVERFDPK 453 (482)
Q Consensus 432 i~v~GG~~~~~~~~~~~~y~~~ 453 (482)
|||....+ +.|.+|+++
T Consensus 305 lyvad~~~-----~~I~~~~~~ 321 (329)
T 3fvz_A 305 VYIGDAHT-----NTVWKFTLT 321 (329)
T ss_dssp EEEEESSS-----CCEEEEEEE
T ss_pred EEEEECCC-----CEEEEEeCC
Confidence 99987654 468888875
No 119
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=93.55 E-value=2.5 Score=35.31 Aligned_cols=141 Identities=11% Similarity=0.058 Sum_probs=78.5
Q ss_pred CCCcEEEEeccccCCCCCceeEEEeCCCC--Cee--ec----cCCCCCCCceeEEEE---CCEEEEEecCCCCCCCCeEE
Q psy11333 285 RRGEVLFAVGGWCSGDAISSVERYDPQSS--DWK--IV----APMSKRRCGVGVAVL---NDLLYAVGGHDGQSYLNSIE 353 (482)
Q Consensus 285 ~~~~~l~~~GG~~~~~~~~~~~~~d~~~~--~W~--~~----~~~~~~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~ 353 (482)
..++++|++-| +.+|+++.... ... .+ +.+|. ..-++.. ++++|++-| +..+
T Consensus 14 ~~~g~~yfFkg-------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~---~IDAa~~~~~~~~~yfFkG-------~~yw 76 (195)
T 1itv_A 14 EIGNQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADKWPALPR---KLDSVFEEPLSKKLFFFSG-------RQVW 76 (195)
T ss_dssp EETTEEEEEET-------TEEEEECCSSSCCCEEEEEHHHHCTTSCS---SCSEEEECTTTCCEEEEET-------TEEE
T ss_pred EeCCEEEEEEC-------CEEEEEECCccccCCCcEEhhhccCCCCC---CccEEEEECCCCeEEEEeC-------CEEE
Confidence 35789999977 46788877652 221 11 23443 2233332 688999988 4577
Q ss_pred EEeCCCCce-eecCC-CCCC--cccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceee-----cC-CC-CCCccc
Q psy11333 354 RYDPQTNQW-SCDVA-PTTS--CRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSR-----VA-PM-TTRRLG 422 (482)
Q Consensus 354 ~yd~~~~~W-~~~~~-~~~~--~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~-----~~-~~-~~~r~~ 422 (482)
+|+..+..- +.+.. .+|. ..-.+++...++++|++-| +..++||..+++=.. +. .. ..|...
T Consensus 77 ~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg-------~~ywr~d~~~~~~~~gyPr~i~~~w~Gvp~~i 149 (195)
T 1itv_A 77 VYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG-------RRLWRFDVKAQMVDPRSASEVDRMFPGVPLDT 149 (195)
T ss_dssp EEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET-------TEEEEEETTTTEECGGGCEEHHHHSTTSCSSC
T ss_pred EEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC-------CEEEEEeCCcccccCCCccChhhcCCCCCCCC
Confidence 777542211 11100 1121 1222333323689999976 467889887643111 10 01 112234
Q ss_pred eEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 423 VAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 423 ~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
.++...+|.+|++-|. ..++||..+.+
T Consensus 150 daa~~~~g~~Yffkg~-------~y~~~~~~~~~ 176 (195)
T 1itv_A 150 HDVFQFREKAYFCQDR-------FYWRVSSRSEL 176 (195)
T ss_dssp SEEEEETTEEEEEETT-------EEEEEECCTTC
T ss_pred CEEEEeCCeEEEEeCC-------EEEEEECCccE
Confidence 4555668999999883 57889887665
No 120
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=93.52 E-value=1.1 Score=42.52 Aligned_cols=145 Identities=13% Similarity=0.098 Sum_probs=76.0
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCce-eEEE-ECCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGV-GVAV-LNDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
++.+++.|+.+ ..+..+|..+.+.... +....... +++. -++.+.+.||.++ ++..||..+.+-..
T Consensus 119 ~~~~l~s~s~D-----g~i~vwd~~~~~~~~~--l~~h~~~V~~v~~~~~~~~l~sgs~D~-----~i~iwd~~~~~~~~ 186 (410)
T 1vyh_C 119 VFSVMVSASED-----ATIKVWDYETGDFERT--LKGHTDSVQDISFDHSGKLLASCSADM-----TIKLWDFQGFECIR 186 (410)
T ss_dssp SSSEEEEEESS-----SCEEEEETTTCCCCEE--ECCCSSCEEEEEECTTSSEEEEEETTS-----CCCEEETTSSCEEE
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEE--EeccCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCceeE
Confidence 45566666632 3578888877654321 11111111 2222 2677888888764 57789987655322
Q ss_pred cCCCCCCcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEE-ECCEEEEEcCCCCC
Q psy11333 365 DVAPTTSCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAV-LGGFLYAIGGSDGQ 441 (482)
Q Consensus 365 ~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~ 441 (482)
. +.........+.+ ++..++.||.+ ..+..||..+......-.-.. .....+.. .++.+++.|+.++
T Consensus 187 ~---~~~h~~~V~~v~~~p~~~~l~s~s~D-----~~i~~wd~~~~~~~~~~~~h~-~~v~~~~~~~~g~~l~s~s~D~- 256 (410)
T 1vyh_C 187 T---MHGHDHNVSSVSIMPNGDHIVSASRD-----KTIKMWEVQTGYCVKTFTGHR-EWVRMVRPNQDGTLIASCSNDQ- 256 (410)
T ss_dssp C---CCCCSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCCEEEEEECCS-SCEEEEEECTTSSEEEEEETTS-
T ss_pred E---EcCCCCCEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEEEeCCC-ccEEEEEECCCCCEEEEEcCCC-
Confidence 2 1111111222222 56777788754 358889988765432211111 11111222 2667888887653
Q ss_pred CCCCeEEEEeCCCCce
Q psy11333 442 SPLNTVERFDPKLNRW 457 (482)
Q Consensus 442 ~~~~~~~~y~~~~~~W 457 (482)
.+.+||..+.+.
T Consensus 257 ----~v~vwd~~~~~~ 268 (410)
T 1vyh_C 257 ----TVRVWVVATKEC 268 (410)
T ss_dssp ----CEEEEETTTCCE
T ss_pred ----eEEEEECCCCce
Confidence 577888766543
No 121
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.43 E-value=1.7 Score=40.45 Aligned_cols=149 Identities=11% Similarity=-0.008 Sum_probs=78.2
Q ss_pred ceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCE-EEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEE
Q psy11333 303 SSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDL-LYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVA 379 (482)
Q Consensus 303 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~ 379 (482)
..++.+|..+..+..+.. ..+........+ +++ |++.+...+ .....++.||+.+++.+.+ ...+. .. ...
T Consensus 216 ~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~d~~~g~~~~l-~~~~~--~~-~~~ 289 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKE-HAEGESCTHEFWIPDGSAMAYVSYFKG-QTDRVIYKANPETLENEEV-MVMPP--CS-HLM 289 (396)
T ss_dssp CCCEEEETTSCCCEESSC-CCTTEEEEEEEECTTSSCEEEEEEETT-TCCEEEEEECTTTCCEEEE-EECCS--EE-EEE
T ss_pred ceEEEEECCCCceeEeec-cCCCccccceEECCCCCEEEEEecCCC-CccceEEEEECCCCCeEEe-eeCCC--CC-CCc
Confidence 578999998888766654 211111222222 554 444432211 1223599999999887766 33332 11 233
Q ss_pred EE-CCEEEEEeccCC-----------CcccCeEEEEeCCCCceeecCCCCCCc----------cceEEEEECC-EEEEEc
Q psy11333 380 VL-DGFLYAVGGQDG-----------VQCLNHVERYDPKENKWSRVAPMTTRR----------LGVAVAVLGG-FLYAIG 436 (482)
Q Consensus 380 ~~-~~~lyv~GG~~~-----------~~~~~~~~~yd~~~~~W~~~~~~~~~r----------~~~~~~~~~~-~i~v~G 436 (482)
.- +|+++++++... ......++.+|+.+.+...+...+... .......-+| .|++.+
T Consensus 290 s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s 369 (396)
T 3c5m_A 290 SNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTS 369 (396)
T ss_dssp ECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEE
T ss_pred cCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEe
Confidence 34 777777654220 012357899999888766654322210 1111222245 555555
Q ss_pred CCCCCCCCCeEEEEeCCCCceeec
Q psy11333 437 GSDGQSPLNTVERFDPKLNRWTAM 460 (482)
Q Consensus 437 G~~~~~~~~~~~~y~~~~~~W~~~ 460 (482)
...+ ...++.+|..+.+++.+
T Consensus 370 ~~~~---~~~l~~~~~~~~~~~~~ 390 (396)
T 3c5m_A 370 DFEG---VPAIYIADVPESYKHLE 390 (396)
T ss_dssp CTTS---SCEEEEEECCTTCC---
T ss_pred cCCC---CceEEEEEEcccccccc
Confidence 4332 24689999888776654
No 122
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=93.41 E-value=2.5 Score=36.23 Aligned_cols=136 Identities=15% Similarity=0.087 Sum_probs=75.4
Q ss_pred CCcEEEEeccccCCCCCceeEEEeC------C---------CCCeeeccCCCCCCCceeEEE--ECCEEEEEecCCCCCC
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDP------Q---------SSDWKIVAPMSKRRCGVGVAV--LNDLLYAVGGHDGQSY 348 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~------~---------~~~W~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~ 348 (482)
..+++|++-| +.+|+++. . +..|..+++-+-.....-+++ .++.+|++-|
T Consensus 12 ~~ge~~fFk~-------~~~wr~~~~~~~~~~~~~~~p~~I~~~Wp~LP~~~f~~~~iDAa~~~~~g~~~fFkg------ 78 (225)
T 3oyo_A 12 SEYEVYFFAK-------NKYVRLHYTPGASSDTILTNLRLISSGFPSLAGTPFAEPGIDCSFHTEASEAYVFSG------ 78 (225)
T ss_dssp STTEEEEEET-------TEEEEEECCTTCSCCEEEEEEEEHHHHCGGGTTSTTTTTCCSEEEECSTTEEEEEET------
T ss_pred CCCEEEEEEC-------CEEEEEecccccccCcccCCceehhhhcccCCCccCCCCCEeEEEEcCCCeEEEEcC------
Confidence 4789999977 35777772 1 122333332111112333444 5899999988
Q ss_pred CCeEEEEeCCCC---------------ceeecCCCCCCc--ccceeEE-E--ECCEEEEEeccCCCcccCeEEEEeCCCC
Q psy11333 349 LNSIERYDPQTN---------------QWSCDVAPTTSC--RTSVGVA-V--LDGFLYAVGGQDGVQCLNHVERYDPKEN 408 (482)
Q Consensus 349 ~~~~~~yd~~~~---------------~W~~~~~~~~~~--r~~~~~~-~--~~~~lyv~GG~~~~~~~~~~~~yd~~~~ 408 (482)
+..++||..++ .|..+ |.. ....-++ . .++++|.+-| +..|+||..++
T Consensus 79 -~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~L----P~~~~~~~IDAA~~~~~~gk~yfFkG-------~~yw~~d~~~~ 146 (225)
T 3oyo_A 79 -NHSAYIDYAPGTTNDKILVGPTTIAEMFPVL----NNTVFEDSIDSAFRSTKGKEVYLFKG-------NKYVRIAYDSK 146 (225)
T ss_dssp -TEEEEEECCTTSSCCEEEEEEEEHHHHCGGG----TTSTTTSCCCEEEECSSTTEEEEEET-------TEEEEEETTTT
T ss_pred -CEEEEEecccccCCCceecCchhhhhcCCCC----CCcccccccceEEEECCCCcEEEEeC-------CeEEEEECCCC
Confidence 45788865322 12222 210 0022233 2 3689999977 46788886665
Q ss_pred ceee----cC-CCC------CCccceEEEEE--CCEEEEEcCCCCCCCCCeEEEEeCC
Q psy11333 409 KWSR----VA-PMT------TRRLGVAVAVL--GGFLYAIGGSDGQSPLNTVERFDPK 453 (482)
Q Consensus 409 ~W~~----~~-~~~------~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~y~~~ 453 (482)
+... +. ..| .+...-++... ++++|++-| +..++||..
T Consensus 147 ~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG-------~~ywr~d~~ 197 (225)
T 3oyo_A 147 QLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG-------QNYVRIDFT 197 (225)
T ss_dssp EEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET-------TEEEEEECC
T ss_pred eecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCC
Confidence 5432 11 122 13333444443 789999988 367999987
No 123
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=93.37 E-value=0.64 Score=43.22 Aligned_cols=143 Identities=15% Similarity=0.083 Sum_probs=75.5
Q ss_pred cEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE---CCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 288 EVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL---NDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 288 ~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
+.+++.||.. ..+..+|..+.+-..............++.+ ++.+++.|+.++ .+..||..+.+-..
T Consensus 194 ~~~~~s~~~d-----g~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~-----~i~~wd~~~~~~~~ 263 (357)
T 4g56_B 194 DTIFLSCGED-----GRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG-----NVSLVNIKNPDSAQ 263 (357)
T ss_dssp SSCEEEEETT-----SCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS-----CEEEEESSCGGGCE
T ss_pred CceeeeeccC-----CceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeeccc-----ceeEEECCCCcEeE
Confidence 3455555532 3477788877654332222222222223333 457888887653 58899988765222
Q ss_pred cCCCCCCcccceeEEEE-C-CEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEE--ECCEEEEEcCCCC
Q psy11333 365 DVAPTTSCRTSVGVAVL-D-GFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAV--LGGFLYAIGGSDG 440 (482)
Q Consensus 365 ~~~~~~~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~ 440 (482)
.......+ -.+++.. + +++++.|+.++ .+..||..+.+..... .......+++. .++.+++.||.++
T Consensus 264 ~~~~~~~~--v~~l~~sp~~~~~lasgs~D~-----~i~iwd~~~~~~~~~~--~H~~~V~~vafsP~d~~~l~s~s~Dg 334 (357)
T 4g56_B 264 TSAVHSQN--ITGLAYSYHSSPFLASISEDC-----TVAVLDADFSEVFRDL--SHRDFVTGVAWSPLDHSKFTTVGWDH 334 (357)
T ss_dssp EECCCSSC--EEEEEECSSSSCCEEEEETTS-----CEEEECTTSCEEEEEC--CCSSCEEEEEECSSSTTEEEEEETTS
T ss_pred EEecccee--EEEEEEcCCCCCEEEEEeCCC-----EEEEEECCCCcEeEEC--CCCCCEEEEEEeCCCCCEEEEEcCCC
Confidence 10111111 1222222 3 46777777543 5788998877654332 22222233333 2678888888764
Q ss_pred CCCCCeEEEEeCCC
Q psy11333 441 QSPLNTVERFDPKL 454 (482)
Q Consensus 441 ~~~~~~~~~y~~~~ 454 (482)
.+.+||..+
T Consensus 335 -----~v~iW~~~~ 343 (357)
T 4g56_B 335 -----KVLHHHLPS 343 (357)
T ss_dssp -----CEEEEECC-
T ss_pred -----eEEEEECCC
Confidence 588888643
No 124
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=93.30 E-value=1.3 Score=39.72 Aligned_cols=168 Identities=12% Similarity=0.122 Sum_probs=84.5
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCC--CCCceeEEEE--CCEEEEEecCCC------CCCCCeEEEEe
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSK--RRCGVGVAVL--NDLLYAVGGHDG------QSYLNSIERYD 356 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~--~~~~~~~~~~--~~~iyv~GG~~~------~~~~~~~~~yd 356 (482)
++.+|+..+ ..++.||+.+.+++.+..... +........+ +|.+|+..-... ......++++|
T Consensus 64 dG~l~v~~~-------~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d 136 (297)
T 3g4e_A 64 SGGYVATIG-------TKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLF 136 (297)
T ss_dssp TSSEEEEET-------TEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEEC
T ss_pred CCCEEEEEC-------CeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEE
Confidence 455655431 468999999998876654322 1111222222 678887431111 01234688998
Q ss_pred CCCCceeecCCCCCCcccceeEEEE-CC-EEEEEeccCCCcccCeEEEEeC--CCCceee---cCCCCCC-ccceEEEEE
Q psy11333 357 PQTNQWSCDVAPTTSCRTSVGVAVL-DG-FLYAVGGQDGVQCLNHVERYDP--KENKWSR---VAPMTTR-RLGVAVAVL 428 (482)
Q Consensus 357 ~~~~~W~~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~yd~--~~~~W~~---~~~~~~~-r~~~~~~~~ 428 (482)
+.. +...+......+ .+++.. ++ .+|+.... ...+++||. .+..... ...++.. ..-.++++-
T Consensus 137 ~~g-~~~~~~~~~~~p---ngi~~spdg~~lyv~~~~-----~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d 207 (297)
T 3g4e_A 137 PDH-HVKKYFDQVDIS---NGLDWSLDHKIFYYIDSL-----SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCID 207 (297)
T ss_dssp TTS-CEEEEEEEESBE---EEEEECTTSCEEEEEEGG-----GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEB
T ss_pred CCC-CEEEEeeccccc---cceEEcCCCCEEEEecCC-----CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEEC
Confidence 863 333331111111 233332 34 68888643 356788875 4444321 1122211 111233332
Q ss_pred -CCEEEEEcCCCCCCCCCeEEEEeCCCCceeecCCCCcCCCceeEEEEcC
Q psy11333 429 -GGFLYAIGGSDGQSPLNTVERFDPKLNRWTAMAPMSTRRKHLGCAVFVG 477 (482)
Q Consensus 429 -~~~i~v~GG~~~~~~~~~~~~y~~~~~~W~~~~~~~~~r~~~~~~~~~~ 477 (482)
+|.||+..... ..+.+||+++.+....-.+|. .....++++|
T Consensus 208 ~~G~lwva~~~~-----~~v~~~d~~tG~~~~~i~~p~--~~~t~~~f~g 250 (297)
T 3g4e_A 208 AEGKLWVACYNG-----GRVIRLDPVTGKRLQTVKLPV--DKTTSCCFGG 250 (297)
T ss_dssp TTSCEEEEEETT-----TEEEEECTTTCCEEEEEECSS--SBEEEEEEES
T ss_pred CCCCEEEEEcCC-----CEEEEEcCCCceEEEEEECCC--CCceEEEEeC
Confidence 67899875322 469999998766543323332 3345556654
No 125
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=93.29 E-value=1.6 Score=41.10 Aligned_cols=152 Identities=21% Similarity=0.159 Sum_probs=78.7
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeee-----ccCCCCCCCce-eEEEE-CC-EEEEEecCCCCCCCCeEEEEeCC
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKI-----VAPMSKRRCGV-GVAVL-ND-LLYAVGGHDGQSYLNSIERYDPQ 358 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~-----~~~~~~~~~~~-~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~ 358 (482)
++.+++.|+.+ ..+..||..+..... +..+....... +++.. ++ .+++.|+.++ .+..||..
T Consensus 93 ~~~~l~s~s~d-----g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg-----~i~iwd~~ 162 (402)
T 2aq5_A 93 NDNVIASGSED-----CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN-----VILVWDVG 162 (402)
T ss_dssp CTTEEEEEETT-----SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS-----CEEEEETT
T ss_pred CCCEEEEEeCC-----CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC-----EEEEEECC
Confidence 55666666632 357888887765421 11111111112 22222 33 5777787653 68999999
Q ss_pred CCceeecCCCCCCcccceeEEEE-CCEEEEEeccCCCcccCeEEEEeCCCCceeecC--CCCCCccceEEEEECCEEEEE
Q psy11333 359 TNQWSCDVAPTTSCRTSVGVAVL-DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVA--PMTTRRLGVAVAVLGGFLYAI 435 (482)
Q Consensus 359 ~~~W~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~r~~~~~~~~~~~i~v~ 435 (482)
+.+.............-.+++.. ++..++.|+.+ ..+..||+.+.+-...- .....+.......-++++++.
T Consensus 163 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 237 (402)
T 2aq5_A 163 TGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-----KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTT 237 (402)
T ss_dssp TTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-----SEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEE
T ss_pred CCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-----CcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEE
Confidence 88755331101111111222222 67777787754 36889999876543322 111222222233337788877
Q ss_pred cCCCCCCCCCeEEEEeCCCC
Q psy11333 436 GGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 436 GG~~~~~~~~~~~~y~~~~~ 455 (482)
|.... ....+.+||..+.
T Consensus 238 g~~~~--~d~~i~iwd~~~~ 255 (402)
T 2aq5_A 238 GFSRM--SERQVALWDTKHL 255 (402)
T ss_dssp EECTT--CCEEEEEEETTBC
T ss_pred eccCC--CCceEEEEcCccc
Confidence 72111 1146888888653
No 126
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=93.25 E-value=3.7 Score=39.42 Aligned_cols=130 Identities=18% Similarity=0.198 Sum_probs=75.9
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeec--cCCCCCCCceeEEEECCEEEEEecCCCCCCCCeEEEEeCCCCc---
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIV--APMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQ--- 361 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~--~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--- 361 (482)
++.+|++-| +..|+||..+++.... +.+| . --++....+++|++-| +..++||+.+++
T Consensus 158 ~~~~yfFkG-------~~yw~yd~~~~~~~~~~w~gi~--~-iDAA~~~~g~~YfFkG-------~~y~rfd~~~~~v~~ 220 (460)
T 1qhu_A 158 DEGILFFQG-------NRKWFWDLTTGTKKERSWPAVG--N-CTSALRWLGRYYCFQG-------NQFLRFNPVSGEVPP 220 (460)
T ss_dssp SSEEEEEET-------TEEEEEETTTTEEEEECCTTSC--C-CSEEEEETTEEEEEET-------TEEEEECTTTCCCCT
T ss_pred CCeEEEEec-------ccEEEEecccceeecccCCCCC--c-cchheeeCCceEEEEC-------CEEEEEcCccCcccC
Confidence 567788877 4679999988765432 2222 2 2344446899999988 457888876543
Q ss_pred ---------eeecCCCC------------------CCcccceeEE-E-ECCEEEEEeccCCCcccCeEEEEeCCC-----
Q psy11333 362 ---------WSCDVAPT------------------TSCRTSVGVA-V-LDGFLYAVGGQDGVQCLNHVERYDPKE----- 407 (482)
Q Consensus 362 ---------W~~~~~~~------------------~~~r~~~~~~-~-~~~~lyv~GG~~~~~~~~~~~~yd~~~----- 407 (482)
|..+ +.. ..+.....++ . .+|++|.+-| +..|++|..+
T Consensus 221 gyPk~is~~w~~c-~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg-------~~yWR~~~~~~~~~p 292 (460)
T 1qhu_A 221 GYPLDVRDYFLSC-PGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSG-------SHYWRLDTNRDGWHS 292 (460)
T ss_dssp TCCEEHHHHTSCC-TTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEET-------TEEEECTTGGGCCCC
T ss_pred CCCcchhhcccCC-CCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeC-------CEEEEEecCCCCcCc
Confidence 3332 110 0111122233 3 4689999977 2355555443
Q ss_pred ----CceeecCCCCCCccceEEEEECCEEEEEcCCCCCCCCCeEEEEeCC
Q psy11333 408 ----NKWSRVAPMTTRRLGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPK 453 (482)
Q Consensus 408 ----~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~ 453 (482)
..|..+ |. .--++...++++|++-| +..++|+..
T Consensus 293 ~~Is~~Wpgl---P~--~IDAAf~~~~~~yfFkG-------~~yw~f~~~ 330 (460)
T 1qhu_A 293 WPIAHQWPQG---PS--TVDAAFSWEDKLYLIQD-------TKVYVFLTK 330 (460)
T ss_dssp EEGGGTCTTS---CS--SCSEEEEETTEEEEEET-------TEEEEEECS
T ss_pred cchhhhccCC---CC--CCcEEEEECCeEEEEeC-------CEEEEEeCC
Confidence 234322 32 23344456889999987 367888864
No 127
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=93.15 E-value=1 Score=41.69 Aligned_cols=143 Identities=11% Similarity=0.050 Sum_probs=72.4
Q ss_pred cEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCce-eEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 288 EVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGV-GVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 288 ~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
..+++.|+.+ ..+..+|..+.+-...-......... +++.. ++.+++.|+.+ ..+..||..+.+-..
T Consensus 182 ~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d-----g~v~~wd~~~~~~~~ 251 (344)
T 4gqb_B 182 DSVFLSCSED-----NRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN-----GTVSLVDTKSTSCVL 251 (344)
T ss_dssp TTEEEEEETT-----SCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETT-----SEEEEEESCC--CCE
T ss_pred CCceeeeccc-----cccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccC-----CcEEEEECCCCcEEE
Confidence 3466666532 35778888876643221111111111 22222 56788888865 368899998765221
Q ss_pred cCCCCCCcccc-eeEEEE-CC-EEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE--CCEEEEEcCCC
Q psy11333 365 DVAPTTSCRTS-VGVAVL-DG-FLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL--GGFLYAIGGSD 439 (482)
Q Consensus 365 ~~~~~~~~r~~-~~~~~~-~~-~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~ 439 (482)
. +...... .+++.. ++ ++++.|+.++ .+..||..+.+-..+.. ......+++.. +..+++.||.+
T Consensus 252 ~---~~~h~~~v~~v~fsp~g~~~lasgs~D~-----~i~vwd~~~~~~~~~~~--H~~~V~~v~~sp~~~~llas~s~D 321 (344)
T 4gqb_B 252 S---SAVHSQCVTGLVFSPHSVPFLASLSEDC-----SLAVLDSSLSELFRSQA--HRDFVRDATWSPLNHSLLTTVGWD 321 (344)
T ss_dssp E---EECCSSCEEEEEECSSSSCCEEEEETTS-----CEEEECTTCCEEEEECC--CSSCEEEEEECSSSTTEEEEEETT
T ss_pred E---EcCCCCCEEEEEEccCCCeEEEEEeCCC-----eEEEEECCCCcEEEEcC--CCCCEEEEEEeCCCCeEEEEEcCC
Confidence 1 1111111 122222 33 6777777643 57889988775443322 22222233332 34688888876
Q ss_pred CCCCCCeEEEEeCCCC
Q psy11333 440 GQSPLNTVERFDPKLN 455 (482)
Q Consensus 440 ~~~~~~~~~~y~~~~~ 455 (482)
+ .|..++..++
T Consensus 322 ~-----~v~~w~v~~~ 332 (344)
T 4gqb_B 322 H-----QVVHHVVPTE 332 (344)
T ss_dssp S-----CEEEEECCC-
T ss_pred C-----eEEEEECCCC
Confidence 4 5777776543
No 128
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=93.10 E-value=0.8 Score=41.63 Aligned_cols=110 Identities=15% Similarity=0.193 Sum_probs=58.1
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE----CCEEEEEecCCCCCCCCeEEEEeCCCCce
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL----NDLLYAVGGHDGQSYLNSIERYDPQTNQW 362 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 362 (482)
++..++.|+.+ ..+..+|..+.....+..+.........+.+ ++.+.+.||.++ ++..||..+..|
T Consensus 24 ~g~~lasgs~D-----~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~-----~v~iWd~~~~~~ 93 (316)
T 3bg1_A 24 YGTRLATCSSD-----RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDR-----KVIIWREENGTW 93 (316)
T ss_dssp GGCEEEEEETT-----TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTS-----CEEEECCSSSCC
T ss_pred CCCEEEEEeCC-----CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCC-----EEEEEECCCCcc
Confidence 45666666632 3577777766543322222211112222222 267777787663 689999998877
Q ss_pred eecCCCCCCcccc-eeEEEE-C--CEEEEEeccCCCcccCeEEEEeCCCC-ceee
Q psy11333 363 SCDVAPTTSCRTS-VGVAVL-D--GFLYAVGGQDGVQCLNHVERYDPKEN-KWSR 412 (482)
Q Consensus 363 ~~~~~~~~~~r~~-~~~~~~-~--~~lyv~GG~~~~~~~~~~~~yd~~~~-~W~~ 412 (482)
... ..+...... .+++.. + +.+++.|+.++ .+..||..+. .|..
T Consensus 94 ~~~-~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~-----~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 94 EKS-HEHAGHDSSVNSVCWAPHDYGLILACGSSDG-----AISLLTYTGEGQWEV 142 (316)
T ss_dssp CEE-EEECCCSSCCCEEEECCTTTCSCEEEECSSS-----CEEEEEECSSSCEEE
T ss_pred eEE-EEccCCCCceEEEEECCCCCCcEEEEEcCCC-----CEEEEecCCCCCcce
Confidence 654 211111111 122222 2 66777887643 4667777654 4643
No 129
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=93.08 E-value=2.7 Score=39.45 Aligned_cols=151 Identities=13% Similarity=0.117 Sum_probs=77.0
Q ss_pred EEEEeccccCCCCCceeEEEeCCCCCeeeccC-CCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceeecC
Q psy11333 289 VLFAVGGWCSGDAISSVERYDPQSSDWKIVAP-MSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDV 366 (482)
Q Consensus 289 ~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~-~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 366 (482)
.+++.|+.+ ..+..+|..+.+....-. ......-.+++.. ++..++.|+.+ ..+.+||+.+.+-....
T Consensus 145 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~ 214 (402)
T 2aq5_A 145 NVLLSAGCD-----NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-----KRVRVIEPRKGTVVAEK 214 (402)
T ss_dssp TEEEEEETT-----SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-----SEEEEEETTTTEEEEEE
T ss_pred CEEEEEcCC-----CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-----CcEEEEeCCCCceeeee
Confidence 466666532 357889988876532211 1111111222222 67777777755 47999999887643321
Q ss_pred -CCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCce-eecCCCCCCccceEEEEE-CC-EEEEEcCCCCCC
Q psy11333 367 -APTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKW-SRVAPMTTRRLGVAVAVL-GG-FLYAIGGSDGQS 442 (482)
Q Consensus 367 -~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~~~~r~~~~~~~~-~~-~i~v~GG~~~~~ 442 (482)
......+.......-++++++.|.... ....+..||..+..- .....+........++.. ++ .+++.|+.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~l~~g~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~d--- 289 (402)
T 2aq5_A 215 DRPHEGTRPVHAVFVSEGKILTTGFSRM--SERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGD--- 289 (402)
T ss_dssp ECSSCSSSCCEEEECSTTEEEEEEECTT--CCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTC---
T ss_pred ccCCCCCcceEEEEcCCCcEEEEeccCC--CCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCC---
Confidence 111111112222334688777773211 124688899876432 111122222222333333 33 566666554
Q ss_pred CCCeEEEEeCCCCc
Q psy11333 443 PLNTVERFDPKLNR 456 (482)
Q Consensus 443 ~~~~~~~y~~~~~~ 456 (482)
..+.+||..+.+
T Consensus 290 --g~i~i~d~~~~~ 301 (402)
T 2aq5_A 290 --SSIRYFEITSEA 301 (402)
T ss_dssp --SCEEEEEECSST
T ss_pred --CeEEEEEecCCC
Confidence 367888877655
No 130
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=93.04 E-value=1.1 Score=41.60 Aligned_cols=147 Identities=17% Similarity=0.125 Sum_probs=76.2
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCc-eeEEEE-C-CEEEEEecCCCCCCCCeEEEEeCCCCcee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCG-VGVAVL-N-DLLYAVGGHDGQSYLNSIERYDPQTNQWS 363 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~-~~~~~~-~-~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 363 (482)
++..++.|+.. ..+..+|..+.+-... +...... .+++.. + +.+++.||.++ .+..||..+.+-.
T Consensus 150 dg~~l~sgs~d-----g~v~iwd~~~~~~~~~--~~~h~~~v~~v~~s~~~~~~~~s~~~dg-----~v~~wd~~~~~~~ 217 (357)
T 4g56_B 150 DGTQAVSGGKD-----FSVKVWDLSQKAVLKS--YNAHSSEVNCVAACPGKDTIFLSCGEDG-----RILLWDTRKPKPA 217 (357)
T ss_dssp SSSEEEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTCSSCEEEEETTS-----CEEECCTTSSSCB
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEE--EcCCCCCEEEEEEccCCCceeeeeccCC-----ceEEEECCCCcee
Confidence 55666666643 3578889887764322 1111111 222222 3 35777777653 5889999877643
Q ss_pred ecCCCCCCcccceeEEEE---CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CC-EEEEEcCC
Q psy11333 364 CDVAPTTSCRTSVGVAVL---DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GG-FLYAIGGS 438 (482)
Q Consensus 364 ~~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~i~v~GG~ 438 (482)
.. ............+.+ ++.+++.|+.++ .+..||+.+.+-...-... .....+++.. ++ ++++.|+.
T Consensus 218 ~~-~~~~~~~~~v~~v~~sp~~~~~la~g~~d~-----~i~~wd~~~~~~~~~~~~~-~~~v~~l~~sp~~~~~lasgs~ 290 (357)
T 4g56_B 218 TR-IDFCASDTIPTSVTWHPEKDDTFACGDETG-----NVSLVNIKNPDSAQTSAVH-SQNITGLAYSYHSSPFLASISE 290 (357)
T ss_dssp CB-CCCTTCCSCEEEEEECTTSTTEEEEEESSS-----CEEEEESSCGGGCEEECCC-SSCEEEEEECSSSSCCEEEEET
T ss_pred ee-eeeccccccccchhhhhcccceEEEeeccc-----ceeEEECCCCcEeEEEecc-ceeEEEEEEcCCCCCEEEEEeC
Confidence 32 122212222222332 467888887543 5778888765422111111 1111222322 44 56667776
Q ss_pred CCCCCCCeEEEEeCCCCce
Q psy11333 439 DGQSPLNTVERFDPKLNRW 457 (482)
Q Consensus 439 ~~~~~~~~~~~y~~~~~~W 457 (482)
+ ..+.+||.++.+.
T Consensus 291 D-----~~i~iwd~~~~~~ 304 (357)
T 4g56_B 291 D-----CTVAVLDADFSEV 304 (357)
T ss_dssp T-----SCEEEECTTSCEE
T ss_pred C-----CEEEEEECCCCcE
Confidence 5 3688888876654
No 131
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=93.03 E-value=1.3 Score=40.95 Aligned_cols=135 Identities=16% Similarity=0.132 Sum_probs=69.2
Q ss_pred eeEEEeCCCCCeeeccCC-CCCCC-c-eeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEE
Q psy11333 304 SVERYDPQSSDWKIVAPM-SKRRC-G-VGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVA 379 (482)
Q Consensus 304 ~~~~~d~~~~~W~~~~~~-~~~~~-~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~ 379 (482)
.|..+|..+++-...... ...+. . .+++.. ++...+.|+.++ ++..||..+++-.........+ -.+++
T Consensus 104 ~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~-----~i~iwd~~~~~~~~~~~~h~~~--V~~~~ 176 (344)
T 4gqb_B 104 AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI-----CIKVWDLAQQVVLSSYRAHAAQ--VTCVA 176 (344)
T ss_dssp EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEECCCSSC--EEEEE
T ss_pred EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC-----eEEEEECCCCcEEEEEcCcCCc--eEEEE
Confidence 577788777653221111 01111 1 222222 677888888663 6899999887643220111111 11222
Q ss_pred E-E-CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccce-EEEEE--CCEEEEEcCCCCCCCCCeEEEEeCCC
Q psy11333 380 V-L-DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGV-AVAVL--GGFLYAIGGSDGQSPLNTVERFDPKL 454 (482)
Q Consensus 380 ~-~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~-~~~~~--~~~i~v~GG~~~~~~~~~~~~y~~~~ 454 (482)
. . +..+++.|+.++ .+..||..+.+-...-......... +++.. ++++++.|+.+ ..+.+||..+
T Consensus 177 ~~~~~~~~l~s~s~D~-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d-----g~v~~wd~~~ 246 (344)
T 4gqb_B 177 ASPHKDSVFLSCSEDN-----RILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN-----GTVSLVDTKS 246 (344)
T ss_dssp ECSSCTTEEEEEETTS-----CEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETT-----SEEEEEESCC
T ss_pred ecCCCCCceeeecccc-----ccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccC-----CcEEEEECCC
Confidence 2 2 345788887653 5788998876643322222211112 22222 55788888765 3678888765
Q ss_pred C
Q psy11333 455 N 455 (482)
Q Consensus 455 ~ 455 (482)
.
T Consensus 247 ~ 247 (344)
T 4gqb_B 247 T 247 (344)
T ss_dssp -
T ss_pred C
Confidence 4
No 132
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=92.93 E-value=3.8 Score=42.73 Aligned_cols=135 Identities=9% Similarity=0.193 Sum_probs=79.3
Q ss_pred eeEEEeCCCCCeeeccCC----CCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCC--CCC-Cccc
Q psy11333 304 SVERYDPQSSDWKIVAPM----SKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVA--PTT-SCRT 374 (482)
Q Consensus 304 ~~~~~d~~~~~W~~~~~~----~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~--~~~-~~r~ 374 (482)
-+++||+.+++|...... ..+......... +|.||+... ..+.+||+.++++ .... ... .+-.
T Consensus 472 Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-------~Gl~~~~~~~~~~-~~~~~~~~~~l~~~ 543 (795)
T 4a2l_A 472 ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-------EGLSVFKQEGLDI-QKASILPVSNVTKL 543 (795)
T ss_dssp CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-------SCEEEEEEETTEE-EECCCSCSCGGGGS
T ss_pred ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-------CceEEEeCCCCeE-EEecCCCCCCCCCC
Confidence 478999999999776532 111111222222 567877543 2388999999888 4411 111 1111
Q ss_pred -ceeEEE-ECCEEEEEeccCCCcccCeEEEEeCCCCceeecC---CCCCCccceEEEEE-CCEEEEEcCCCCCCCCCeEE
Q psy11333 375 -SVGVAV-LDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVA---PMTTRRLGVAVAVL-GGFLYAIGGSDGQSPLNTVE 448 (482)
Q Consensus 375 -~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~ 448 (482)
-.++.. .+|.||+... ..+.+||+.++++.... .+|... ..+++.- +|.|++.+. +-+.
T Consensus 544 ~i~~i~~d~~g~lWigT~-------~Gl~~~d~~~~~~~~~~~~~gl~~~~-i~~i~~d~~g~lWi~t~-------~Gl~ 608 (795)
T 4a2l_A 544 FTNCIYEASNGIIWVGTR-------EGFYCFNEKDKQIKRYNTTNGLPNNV-VYGILEDSFGRLWLSTN-------RGIS 608 (795)
T ss_dssp CEEEEEECTTSCEEEEES-------SCEEEEETTTTEEEEECGGGTCSCSC-EEEEEECTTSCEEEEET-------TEEE
T ss_pred eeEEEEECCCCCEEEEeC-------CCceeECCCCCcEEEeCCCCCCchhh-eEEEEECCCCCEEEEcC-------CceE
Confidence 122232 3578887542 24789999998887654 233322 2233322 678888763 3588
Q ss_pred EEeCCCCceeecC
Q psy11333 449 RFDPKLNRWTAMA 461 (482)
Q Consensus 449 ~y~~~~~~W~~~~ 461 (482)
+|||+++++....
T Consensus 609 ~~~~~~~~~~~~~ 621 (795)
T 4a2l_A 609 CFNPETEKFRNFT 621 (795)
T ss_dssp EEETTTTEEEEEC
T ss_pred EEcCCCCcEEEcC
Confidence 9999998887664
No 133
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=92.92 E-value=5 Score=36.03 Aligned_cols=170 Identities=16% Similarity=0.092 Sum_probs=90.7
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCc---
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQ--- 361 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~--- 361 (482)
.++.+|+..... ....++.+|+.+.+...+...+..+...+.+.. ++.+|+.... ...++++|+.+.+
T Consensus 81 ~dG~l~vad~~~---~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~-----~g~i~~~d~~~~~~~v 152 (306)
T 2p4o_A 81 SNGDLVATGWNA---DSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSY-----RGAIWLIDVVQPSGSI 152 (306)
T ss_dssp TTSCEEEEEECT---TSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETT-----TTEEEEEETTTTEEEE
T ss_pred CCCcEEEEeccC---CcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECC-----CCeEEEEeCCCCcEeE
Confidence 456788875321 112588899888887766555544544454443 5567776421 2479999998642
Q ss_pred eeec---C--CCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCC-Cce---eecCCCCCCccceEEEEE-CCE
Q psy11333 362 WSCD---V--APTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKE-NKW---SRVAPMTTRRLGVAVAVL-GGF 431 (482)
Q Consensus 362 W~~~---~--~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~-~~W---~~~~~~~~~r~~~~~~~~-~~~ 431 (482)
|..- . .+........++..-++.||+.--. .+.+++||+.. .+. ........| ..+++- +|.
T Consensus 153 ~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~-----~~~I~~~~~~~~g~~~~~~~~~~~~~P---~gi~vd~dG~ 224 (306)
T 2p4o_A 153 WLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTE-----KMLLLRIPVDSTDKPGEPEIFVEQTNI---DDFAFDVEGN 224 (306)
T ss_dssp EEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETT-----TTEEEEEEBCTTSCBCCCEEEEESCCC---SSEEEBTTCC
T ss_pred EEECCccccccccCCCCcCCCcCcCCCEEEEEeCC-----CCEEEEEEeCCCCCCCccEEEeccCCC---CCeEECCCCC
Confidence 3111 0 0001111122333345689988532 35789999864 221 111111111 223333 678
Q ss_pred EEEEcCCCCCCCCCeEEEEeCCCCceeecCCCCcCCCceeEEEEcC
Q psy11333 432 LYAIGGSDGQSPLNTVERFDPKLNRWTAMAPMSTRRKHLGCAVFVG 477 (482)
Q Consensus 432 i~v~GG~~~~~~~~~~~~y~~~~~~W~~~~~~~~~r~~~~~~~~~~ 477 (482)
+|+.-..+ +.+.+||+. .+...+...+.+-..+..+++++
T Consensus 225 l~va~~~~-----~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g 264 (306)
T 2p4o_A 225 LYGATHIY-----NSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQ 264 (306)
T ss_dssp EEEECBTT-----CCEEEECTT-CCEEEEECGGGTCTTEEEEEECC
T ss_pred EEEEeCCC-----CeEEEECCC-CCEEEEeecccccCCceEEEEec
Confidence 88885432 469999986 44444433334434456666653
No 134
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=92.88 E-value=4.3 Score=38.04 Aligned_cols=147 Identities=10% Similarity=0.035 Sum_probs=74.3
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCc-eeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCG-VGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
++.+++.|+.. ..+..||..+.+-.. .+...... .+++.. ++..++.|+.++ .+..||..+.+-..
T Consensus 150 ~~~~l~s~s~d-----~~i~iwd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~~ 217 (420)
T 3vl1_A 150 SGEALISSSQD-----MQLKIWSVKDGSNPR--TLIGHRATVTDIAIIDRGRNVLSASLDG-----TIRLWECGTGTTIH 217 (420)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTCCCCE--EEECCSSCEEEEEEETTTTEEEEEETTS-----CEEEEETTTTEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCcCce--EEcCCCCcEEEEEEcCCCCEEEEEcCCC-----cEEEeECCCCceeE
Confidence 44555555532 357888887654211 11111111 223333 666777777653 58899998776332
Q ss_pred cCCCCCCcccc-eeEE----------------------EECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCcc
Q psy11333 365 DVAPTTSCRTS-VGVA----------------------VLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRL 421 (482)
Q Consensus 365 ~~~~~~~~r~~-~~~~----------------------~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~ 421 (482)
.......+... .+++ .-+++.++.|+.++ .+..||..+.+-...........
T Consensus 218 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~ 292 (420)
T 3vl1_A 218 TFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSG-----VITVHNVFSKEQTIQLPSKFTCS 292 (420)
T ss_dssp EECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTS-----CEEEEETTTCCEEEEECCTTSSC
T ss_pred EeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCC-----eEEEEECCCCceeEEcccccCCC
Confidence 20111111111 1111 12567777777543 47889987765322222222222
Q ss_pred ceEEEEE-CCE-EEEEcCCCCCCCCCeEEEEeCCCC
Q psy11333 422 GVAVAVL-GGF-LYAIGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 422 ~~~~~~~-~~~-i~v~GG~~~~~~~~~~~~y~~~~~ 455 (482)
..+++.. ++. +++.|+.+ ..+.+||..+.
T Consensus 293 v~~~~~~~~~~~~l~~g~~d-----g~i~vwd~~~~ 323 (420)
T 3vl1_A 293 CNSLTVDGNNANYIYAGYEN-----GMLAQWDLRSP 323 (420)
T ss_dssp EEEEEECSSCTTEEEEEETT-----SEEEEEETTCT
T ss_pred ceeEEEeCCCCCEEEEEeCC-----CeEEEEEcCCC
Confidence 2233333 444 77777765 46888888764
No 135
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=92.87 E-value=1.1 Score=42.11 Aligned_cols=149 Identities=15% Similarity=0.130 Sum_probs=75.5
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
++.+++.|+.+ ..+..||..+.+-...-. .....-.+++.. ++.+++.||-. ....+..||..+.+-..
T Consensus 228 ~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~p~~~~ll~~~~gs---~d~~i~i~d~~~~~~~~ 298 (401)
T 4aez_A 228 DGLQLASGGND-----NVVQIWDARSSIPKFTKT-NHNAAVKAVAWCPWQSNLLATGGGT---MDKQIHFWNAATGARVN 298 (401)
T ss_dssp TSSEEEEEETT-----SCEEEEETTCSSEEEEEC-CCSSCCCEEEECTTSTTEEEEECCT---TTCEEEEEETTTCCEEE
T ss_pred CCCEEEEEeCC-----CeEEEccCCCCCccEEec-CCcceEEEEEECCCCCCEEEEecCC---CCCEEEEEECCCCCEEE
Confidence 45566666632 357888888754322111 111111233332 45677777511 12468999998876443
Q ss_pred cCCCCCCcccceeEEE-ECCE-EEEEeccCCCcccCeEEEEeCCCCceeecCCCCC--CccceEEEEECCEEEEEcCCCC
Q psy11333 365 DVAPTTSCRTSVGVAV-LDGF-LYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTT--RRLGVAVAVLGGFLYAIGGSDG 440 (482)
Q Consensus 365 ~~~~~~~~r~~~~~~~-~~~~-lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~--~r~~~~~~~~~~~i~v~GG~~~ 440 (482)
. -....+ -.+++. -+++ +++.+|... ..+..||..+........++. .+.......-++..++.||.+
T Consensus 299 ~-~~~~~~--v~~~~~s~~~~~l~~~~g~~d----g~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~d- 370 (401)
T 4aez_A 299 T-VDAGSQ--VTSLIWSPHSKEIMSTHGFPD----NNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASD- 370 (401)
T ss_dssp E-EECSSC--EEEEEECSSSSEEEEEECTTT----CEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTT-
T ss_pred E-EeCCCc--EEEEEECCCCCeEEEEeecCC----CcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCC-
Confidence 3 111111 112222 1444 444434322 357888888776665543221 222222222367778888765
Q ss_pred CCCCCeEEEEeCCCCc
Q psy11333 441 QSPLNTVERFDPKLNR 456 (482)
Q Consensus 441 ~~~~~~~~~y~~~~~~ 456 (482)
..+.+||..+.+
T Consensus 371 ----g~i~iw~~~~~~ 382 (401)
T 4aez_A 371 ----ENLKFWRVYDGD 382 (401)
T ss_dssp ----SEEEEEECCC--
T ss_pred ----CcEEEEECCCCc
Confidence 478899987654
No 136
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=92.86 E-value=3.9 Score=34.55 Aligned_cols=138 Identities=17% Similarity=0.180 Sum_probs=77.8
Q ss_pred CCCcEEEEeccccCCCCCceeEEEeCCCCCeee--c----cCCCCCCCceeEEE-E--CCEEEEEecCCCCCCCCeEEEE
Q psy11333 285 RRGEVLFAVGGWCSGDAISSVERYDPQSSDWKI--V----APMSKRRCGVGVAV-L--NDLLYAVGGHDGQSYLNSIERY 355 (482)
Q Consensus 285 ~~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~--~----~~~~~~~~~~~~~~-~--~~~iyv~GG~~~~~~~~~~~~y 355 (482)
...+++|++-| +.+|+++.....+.. + +.+|. ..-++. . ++++|++-| +.+++|
T Consensus 31 ~~~g~~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~wp~Lp~---~iDAa~~~~~~~~iyfFkG-------~~~w~~ 93 (207)
T 1pex_A 31 SLRGETMIFKD-------RFFWRLHPQQVDAELFLTKSFWPELPN---RIDAAYEHPSHDLIFIFRG-------RKFWAL 93 (207)
T ss_dssp EETTEEEEEET-------TEEEEECSSSSCCEEEEHHHHCTTSCS---SCCEEEEETTTTEEEEEET-------TEEEEE
T ss_pred eCCCcEEEEEC-------CEEEEEeCCCcCCCceehhHhccCCCC---CccEEEEeccCCcEEEEcc-------CEEEEE
Confidence 35788898876 457777765544321 1 23442 222333 2 689999988 467888
Q ss_pred eCCCCce---eecCCCCCCcc--cceeEEE-E--CCEEEEEeccCCCcccCeEEEEeCCCCceee-----c----CCCCC
Q psy11333 356 DPQTNQW---SCDVAPTTSCR--TSVGVAV-L--DGFLYAVGGQDGVQCLNHVERYDPKENKWSR-----V----APMTT 418 (482)
Q Consensus 356 d~~~~~W---~~~~~~~~~~r--~~~~~~~-~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~-----~----~~~~~ 418 (482)
+..+..- +.+ ..+..|. ....++. . ++++|++-| +..|+||..+++=.. + +.+|
T Consensus 94 ~~~~~~~gyPk~I-~~~GlP~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~~~d~gyPr~i~~~~~Gip- 164 (207)
T 1pex_A 94 NGYDILEGYPKKI-SELGLPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYDDTNHIMDKDYPRLIEEDFPGIG- 164 (207)
T ss_dssp STTCCCTTCSEES-TTTTCCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEETTTTEECSSCCCBHHHHSTTSC-
T ss_pred eCCeeccCCceec-cccCCCCCCccccEEEEeCCCCEEEEEeC-------CEEEEEeCcCccccCCCCccHHHcCCCCC-
Confidence 7543221 122 1111121 1222332 2 489999977 467889886543110 0 1222
Q ss_pred CccceEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 419 RRLGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 419 ~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
....++...+|++|++-| +..++||..+++
T Consensus 165 -~~iDaAf~~~g~~YfFkg-------~~y~rf~~~~~~ 194 (207)
T 1pex_A 165 -DKVDAVYEKNGYIYFFNG-------PIQFEYSIWSNR 194 (207)
T ss_dssp -SCCSEEEEETTEEEEEET-------TEEEEEETTTTE
T ss_pred -CCccEEEEcCCcEEEEEC-------CEEEEEeCCccE
Confidence 223344456999999988 467899987665
No 137
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.78 E-value=0.88 Score=42.49 Aligned_cols=152 Identities=10% Similarity=-0.058 Sum_probs=79.0
Q ss_pred ceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCE-EEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccce-eE
Q psy11333 303 SSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDL-LYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSV-GV 378 (482)
Q Consensus 303 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~-~~ 378 (482)
..++.+|+.+.+...+... .......... ++. |++............++.+|..+..++.+ .. ..+.... ..
T Consensus 168 ~~l~~~d~~~g~~~~~~~~--~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l-~~-~~~~~~~~~~ 243 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQD--TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKI-KE-HAEGESCTHE 243 (396)
T ss_dssp EEEEEEETTTCCEEEEEEE--SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEES-SC-CCTTEEEEEE
T ss_pred ceEEEEECCCCcEEeeccC--CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEe-ec-cCCCccccce
Confidence 4688899988877655421 1211222222 344 54443211111225789999988888877 33 2111111 12
Q ss_pred E-EECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCEEEEEcCCCC-----------CCCCC
Q psy11333 379 A-VLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGFLYAIGGSDG-----------QSPLN 445 (482)
Q Consensus 379 ~-~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~-----------~~~~~ 445 (482)
+ .-+|+.+++.+.........++.||+.+.+...+...+. .. ....- +|+++++++... .....
T Consensus 244 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~ 320 (396)
T 3c5m_A 244 FWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDP 320 (396)
T ss_dssp EECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS--EE-EEEECSSSSEEEEEECCC----------CCCCCC
T ss_pred EECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC--CC-CCccCCCCceEEEecCCcceeeccccccccCCCC
Confidence 2 225553333332211112349999998887776654442 11 22233 677666654221 11236
Q ss_pred eEEEEeCCCCceeecC
Q psy11333 446 TVERFDPKLNRWTAMA 461 (482)
Q Consensus 446 ~~~~y~~~~~~W~~~~ 461 (482)
.++.+|+.+.+...+.
T Consensus 321 ~i~~~d~~~~~~~~l~ 336 (396)
T 3c5m_A 321 FLYVLNTKAKSAQKLC 336 (396)
T ss_dssp EEEEEETTTTBCCEEE
T ss_pred cEEEEecccCceEEcc
Confidence 7999999877665553
No 138
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=92.77 E-value=5.6 Score=36.22 Aligned_cols=146 Identities=16% Similarity=0.231 Sum_probs=73.7
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCe--eeccCCCCCCCce-eEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCce
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDW--KIVAPMSKRRCGV-GVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQW 362 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W--~~~~~~~~~~~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 362 (482)
++..++.||.. ..+..||..+..- .....+....... ++... ++. ++.|+.+ ..+..||..+.+-
T Consensus 108 ~~~~l~s~~~d-----~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d-----~~i~~wd~~~~~~ 176 (340)
T 1got_B 108 SGNYVACGGLD-----NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGD-----TTCALWDIETGQQ 176 (340)
T ss_dssp TSSEEEEEETT-----CEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETT-----SCEEEEETTTTEE
T ss_pred CCCEEEEEeCC-----CeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECC-----CcEEEEECCCCcE
Confidence 45556666642 3577788766531 1111111111111 22222 555 4555544 3688999988765
Q ss_pred eecCCCCCCcccceeEEE-ECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCEEEEEcCCCC
Q psy11333 363 SCDVAPTTSCRTSVGVAV-LDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGFLYAIGGSDG 440 (482)
Q Consensus 363 ~~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~ 440 (482)
......... .-.+++. -++++++.|+.++ .+..||+.+..-...-.-. .....+++.. ++..++.|+.++
T Consensus 177 ~~~~~~h~~--~v~~~~~~~~~~~l~sg~~d~-----~v~~wd~~~~~~~~~~~~h-~~~v~~v~~~p~~~~l~s~s~d~ 248 (340)
T 1got_B 177 TTTFTGHTG--DVMSLSLAPDTRLFVSGACDA-----SAKLWDVREGMCRQTFTGH-ESDINAICFFPNGNAFATGSDDA 248 (340)
T ss_dssp EEEECCCSS--CEEEEEECTTSSEEEEEETTS-----CEEEEETTTCSEEEEECCC-SSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEcCCCC--ceEEEEECCCCCEEEEEeCCC-----cEEEEECCCCeeEEEEcCC-cCCEEEEEEcCCCCEEEEEcCCC
Confidence 432011111 1112222 2677888888654 5778898766432221111 1112222222 677888888763
Q ss_pred CCCCCeEEEEeCCCCc
Q psy11333 441 QSPLNTVERFDPKLNR 456 (482)
Q Consensus 441 ~~~~~~~~~y~~~~~~ 456 (482)
.+.+||..+.+
T Consensus 249 -----~v~iwd~~~~~ 259 (340)
T 1got_B 249 -----TCRLFDLRADQ 259 (340)
T ss_dssp -----CEEEEETTTTE
T ss_pred -----cEEEEECCCCc
Confidence 57888876554
No 139
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=92.77 E-value=2.6 Score=39.15 Aligned_cols=143 Identities=14% Similarity=-0.020 Sum_probs=77.9
Q ss_pred EEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCc-eeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCceeec
Q psy11333 289 VLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCG-VGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCD 365 (482)
Q Consensus 289 ~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 365 (482)
.+++.|+.. ..+..||..+.+....-........ .+++.. ++.+++.|+.+ ..+..||..+.....+
T Consensus 87 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~ 156 (383)
T 3ei3_B 87 TTVAVGSKG-----GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR-----GATTLRDFSGSVIQVF 156 (383)
T ss_dssp TEEEEEEBT-----SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT-----TEEEEEETTSCEEEEE
T ss_pred CEEEEEcCC-----CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC-----CEEEEEECCCCceEEE
Confidence 566776642 3588899988877554433222222 233333 34677777755 3689999998776655
Q ss_pred CCCCCC-cccceeEE-EECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCE-EEEEcCCCCC
Q psy11333 366 VAPTTS-CRTSVGVA-VLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGF-LYAIGGSDGQ 441 (482)
Q Consensus 366 ~~~~~~-~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~-i~v~GG~~~~ 441 (482)
..... ...-.+++ .-+++.++.|+.+ ..+..||.....-..+.... ....+++.. ++. +++.|+.+
T Consensus 157 -~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~h~--~~v~~~~~~~~~~~~l~s~~~d-- 226 (383)
T 3ei3_B 157 -AKTDSWDYWYCCVDVSVSRQMLATGDST-----GRLLLLGLDGHEIFKEKLHK--AKVTHAEFNPRCDWLMATSSVD-- 226 (383)
T ss_dssp -ECCCCSSCCEEEEEEETTTTEEEEEETT-----SEEEEEETTSCEEEEEECSS--SCEEEEEECSSCTTEEEEEETT--
T ss_pred -eccCCCCCCeEEEEECCCCCEEEEECCC-----CCEEEEECCCCEEEEeccCC--CcEEEEEECCCCCCEEEEEeCC--
Confidence 22211 11112222 2367777787754 36888888544333332211 112222222 444 77777765
Q ss_pred CCCCeEEEEeCCC
Q psy11333 442 SPLNTVERFDPKL 454 (482)
Q Consensus 442 ~~~~~~~~y~~~~ 454 (482)
..+.+||..+
T Consensus 227 ---~~i~iwd~~~ 236 (383)
T 3ei3_B 227 ---ATVKLWDLRN 236 (383)
T ss_dssp ---SEEEEEEGGG
T ss_pred ---CEEEEEeCCC
Confidence 3577777664
No 140
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=92.72 E-value=2.6 Score=43.84 Aligned_cols=138 Identities=8% Similarity=-0.053 Sum_probs=77.8
Q ss_pred eeEEEeCCCCCeeeccCC-CCCCC-ceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCC-cccceeEE
Q psy11333 304 SVERYDPQSSDWKIVAPM-SKRRC-GVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTS-CRTSVGVA 379 (482)
Q Consensus 304 ~~~~~d~~~~~W~~~~~~-~~~~~-~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~-~r~~~~~~ 379 (482)
-+.+||+.++++...... ..+.. -.+++.- ++.|++ |... ..+.+||+.+++++.. ..... ...-.++.
T Consensus 384 Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~-----~Gl~~~~~~~~~~~~~-~~~~~~~~~v~~i~ 456 (781)
T 3v9f_A 384 GINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYL-----GNISYYNTRLKKFQII-ELEKNELLDVRVFY 456 (781)
T ss_dssp CEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETT-----EEEEEECSSSCEEEEC-CSTTTCCCCEEEEE
T ss_pred cEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-Eecc-----CCEEEEcCCCCcEEEe-ccCCCCCCeEEEEE
Confidence 378899988777654211 11111 1222222 567777 4321 3589999999999877 32111 11222333
Q ss_pred EE-CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCC----CccceEEEE-ECCEEEEEcCCCCCCCCCeEEEEeCC
Q psy11333 380 VL-DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTT----RRLGVAVAV-LGGFLYAIGGSDGQSPLNTVERFDPK 453 (482)
Q Consensus 380 ~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~----~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~y~~~ 453 (482)
.. +|.||+... ..+.+||+.+.+|......+. .....++.. -+|.|++-... .-+++||++
T Consensus 457 ~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~------~Gl~~~~~~ 523 (781)
T 3v9f_A 457 EDKNKKIWIGTH-------AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFG------GGVGIYTPD 523 (781)
T ss_dssp ECTTSEEEEEET-------TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESS------SCEEEECTT
T ss_pred ECCCCCEEEEEC-------CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcC------CCEEEEeCC
Confidence 32 578887532 358899999998877653321 111122222 26678875421 237889998
Q ss_pred CCceeecC
Q psy11333 454 LNRWTAMA 461 (482)
Q Consensus 454 ~~~W~~~~ 461 (482)
+++|+.+.
T Consensus 524 ~~~~~~~~ 531 (781)
T 3v9f_A 524 MQLVRKFN 531 (781)
T ss_dssp CCEEEEEC
T ss_pred CCeEEEcc
Confidence 88887764
No 141
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=92.60 E-value=2.2 Score=43.75 Aligned_cols=117 Identities=21% Similarity=0.313 Sum_probs=71.1
Q ss_pred EEEECCEEEEEecCCCCCCCCeEEEEeCCCCc--eeecCCCCCCc--------ccceeEEEECCEEEEEeccCCCcccCe
Q psy11333 330 VAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQ--WSCDVAPTTSC--------RTSVGVAVLDGFLYAVGGQDGVQCLNH 399 (482)
Q Consensus 330 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~--------r~~~~~~~~~~~lyv~GG~~~~~~~~~ 399 (482)
-++.++.||+.+.. ..++++|..+.+ |+.- ...+.. ....+.++.+++||+... -..
T Consensus 66 P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~------dg~ 132 (689)
T 1yiq_A 66 PIVVDGVMYTTGPF------SVVYALDARDGRLIWKYD-PQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL------DGR 132 (689)
T ss_dssp CEEETTEEEEECGG------GCEEEEETTTCCEEEEEC-CCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSE
T ss_pred CEEECCEEEEEcCC------CeEEEEECCCCceeEEEc-CCCCccccccccccCCCCccEEECCEEEEEcc------CCE
Confidence 34679999997652 359999998776 8865 322211 112234677899887642 146
Q ss_pred EEEEeCCCC--ceeecCC-CCC--CccceEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCCc--eee
Q psy11333 400 VERYDPKEN--KWSRVAP-MTT--RRLGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLNR--WTA 459 (482)
Q Consensus 400 ~~~yd~~~~--~W~~~~~-~~~--~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~~--W~~ 459 (482)
+.++|.+|. .|+.-.. -+. .....+.++.++.+|+-.+.........++.||.++.+ |+.
T Consensus 133 l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 133 LEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp EEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred EEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 889998866 4876543 111 11122335568888874332111234579999998765 865
No 142
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=92.50 E-value=3.1 Score=42.54 Aligned_cols=153 Identities=13% Similarity=0.021 Sum_probs=81.4
Q ss_pred CceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCC-ceeecCCCCCCcc----c
Q psy11333 302 ISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTN-QWSCDVAPTTSCR----T 374 (482)
Q Consensus 302 ~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~~r----~ 374 (482)
...++.+|..+.+-..+............+.+ +++..++++.+......+++.+|+.+. .++.+ ....... .
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~~~~~~~~~ 312 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTL-FVETDKHYVEPL 312 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEE-EEEECSSCCCCC
T ss_pred eeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEE-EEccCCCeECcc
Confidence 35789999988876554432111222222332 665444444443333457999999988 66655 2111110 0
Q ss_pred ceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE--CC-EEEEEcCCCCCCCCCeEEE
Q psy11333 375 SVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL--GG-FLYAIGGSDGQSPLNTVER 449 (482)
Q Consensus 375 ~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~~~~ 449 (482)
......- +|++++.+..++ ...++.+|........+..-.... .....+ ++ .||+.+..++ .....++.
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g---~~~l~~~~~~~~~~~~l~~~~~~v--~~~~~~spdg~~l~~~~~~~~-~~~~~l~~ 386 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDG---WNHLYLYDTTGRLIRQVTKGEWEV--TNFAGFDPKGTRLYFESTEAS-PLERHFYC 386 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTS---SCEEEEEETTSCEEEECCCSSSCE--EEEEEECTTSSEEEEEESSSC-TTCBEEEE
T ss_pred CCceeecCCCCEEEEEEccCC---ccEEEEEECCCCEEEecCCCCeEE--EeeeEEcCCCCEEEEEecCCC-CceEEEEE
Confidence 1112233 778666665433 357888887766666664322211 121223 44 5666665432 12357888
Q ss_pred EeCCCCceeecC
Q psy11333 450 FDPKLNRWTAMA 461 (482)
Q Consensus 450 y~~~~~~W~~~~ 461 (482)
+|..+.+...+.
T Consensus 387 ~d~~~~~~~~l~ 398 (706)
T 2z3z_A 387 IDIKGGKTKDLT 398 (706)
T ss_dssp EETTCCCCEESC
T ss_pred EEcCCCCceecc
Confidence 998777665554
No 143
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=92.44 E-value=5 Score=41.05 Aligned_cols=170 Identities=14% Similarity=0.063 Sum_probs=89.0
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEE-ECCEEEEEecCCCC--------CCCCeEEEEe
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAV-LNDLLYAVGGHDGQ--------SYLNSIERYD 356 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~--------~~~~~~~~yd 356 (482)
-+++..++.....+..-..++.+|..+++......++.... .+.+- -+|+.++++..+.. .....++.++
T Consensus 130 PDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~ 208 (695)
T 2bkl_A 130 WDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHT 208 (695)
T ss_dssp TTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEE
T ss_pred CCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEE
Confidence 35555555433333333579999999988641112222111 22222 36666666655432 2345699999
Q ss_pred CCCCcee--ecCCCCCCcccceeE-EEECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEECCEEE
Q psy11333 357 PQTNQWS--CDVAPTTSCRTSVGV-AVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVLGGFLY 433 (482)
Q Consensus 357 ~~~~~W~--~~~~~~~~~r~~~~~-~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~ 433 (482)
..+.+-+ .+......+....+. ..-+|+..+++...+. ....++.+|..+..|..+..-.... ...+..+|.+|
T Consensus 209 l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~-~~~~l~~~~~~~~~~~~l~~~~~~~--~~~~~~~g~l~ 285 (695)
T 2bkl_A 209 LGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW-SENDVYWKRPGEKDFRLLVKGVGAK--YEVHAWKDRFY 285 (695)
T ss_dssp TTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT-TEEEEEEECTTCSSCEEEEECSSCC--EEEEEETTEEE
T ss_pred CCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC-CceEEEEEcCCCCceEEeecCCCce--EEEEecCCcEE
Confidence 9887643 221111112222222 2335665555443221 2357888887777887776432222 22223566666
Q ss_pred EEcCCCCCCCCCeEEEEeCCCCc---eeecC
Q psy11333 434 AIGGSDGQSPLNTVERFDPKLNR---WTAMA 461 (482)
Q Consensus 434 v~GG~~~~~~~~~~~~y~~~~~~---W~~~~ 461 (482)
+....+. ....++.+|..+.+ |+.+.
T Consensus 286 ~~s~~~~--~~~~l~~~d~~~~~~~~~~~l~ 314 (695)
T 2bkl_A 286 VLTDEGA--PRQRVFEVDPAKPARASWKEIV 314 (695)
T ss_dssp EEECTTC--TTCEEEEEBTTBCSGGGCEEEE
T ss_pred EEECCCC--CCCEEEEEeCCCCCccCCeEEe
Confidence 6654432 23689999987654 87764
No 144
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=92.40 E-value=1.9 Score=38.50 Aligned_cols=109 Identities=19% Similarity=0.243 Sum_probs=58.5
Q ss_pred ECCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEE-CCEEEEEeccCCCcccCeEEEEeCCCCcee
Q psy11333 333 LNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVL-DGFLYAVGGQDGVQCLNHVERYDPKENKWS 411 (482)
Q Consensus 333 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 411 (482)
-++. ++.|+.+ ..+..||..+.+-......... .-.+++.. +++ ++.||.+ ..+..||..+.+..
T Consensus 194 ~~~~-~~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~--~i~~~~~~~~~~-l~~~~~d-----g~v~iwd~~~~~~~ 259 (313)
T 3odt_A 194 DDGH-FISCSND-----GLIKLVDMHTGDVLRTYEGHES--FVYCIKLLPNGD-IVSCGED-----RTVRIWSKENGSLK 259 (313)
T ss_dssp ETTE-EEEEETT-----SEEEEEETTTCCEEEEEECCSS--CEEEEEECTTSC-EEEEETT-----SEEEEECTTTCCEE
T ss_pred CCCe-EEEccCC-----CeEEEEECCchhhhhhhhcCCc--eEEEEEEecCCC-EEEEecC-----CEEEEEECCCCcee
Confidence 3667 6667654 3689999987653322011111 11223332 454 5566643 36889998877654
Q ss_pred ecCCCCCCccceEEEEE-CCEEEEEcCCCCCCCCCeEEEEeCCCCceeecCC
Q psy11333 412 RVAPMTTRRLGVAVAVL-GGFLYAIGGSDGQSPLNTVERFDPKLNRWTAMAP 462 (482)
Q Consensus 412 ~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~y~~~~~~W~~~~~ 462 (482)
..-..+... ..+++.. +++ ++.|+.+ +.+.+||..+++|.....
T Consensus 260 ~~~~~~~~~-i~~~~~~~~~~-~~~~~~d-----g~i~iw~~~~~~~~~~~~ 304 (313)
T 3odt_A 260 QVITLPAIS-IWSVDCMSNGD-IIVGSSD-----NLVRIFSQEKSRWASEDE 304 (313)
T ss_dssp EEEECSSSC-EEEEEECTTSC-EEEEETT-----SCEEEEESCGGGCCC---
T ss_pred EEEeccCce-EEEEEEccCCC-EEEEeCC-----CcEEEEeCCCCceeehhh
Confidence 433222222 2222222 566 4556665 468999998887765443
No 145
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=92.37 E-value=0.067 Score=41.15 Aligned_cols=82 Identities=15% Similarity=0.202 Sum_probs=57.9
Q ss_pred eEEEEeCCeEEeceeEEeeccCHHHHHHhcC--C--CCcCccceEEEccCCHHHHHHHHHHhhcCeeeeccc-cHhhHHH
Q psy11333 39 DVVLNVGARKIFAHRVVLSACSPYFRAMFTG--E--LAESRQAEVTIRDIDDVAMDNLIEFCYTSHITVEES-NVQTLLP 113 (482)
Q Consensus 39 Dv~i~~~~~~~~~hk~iL~~~S~~F~~~~~~--~--~~e~~~~~i~l~~~~~~~~~~~l~~~y~~~~~~~~~-~~~~ll~ 113 (482)
-|.|.|+|..|...+..|..... .++.. . ......+.+-| |=++..|..||+|+.+|.+.++.+ ....+++
T Consensus 14 ~V~LNVGG~~F~t~~~TL~~~p~---S~L~~~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnflR~G~l~~p~~~~~~~l~~ 89 (124)
T 1s1g_A 14 LIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRYECISAYDD 89 (124)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTT---SSTTSSGGGGTBCSSSCSEEE-CSCHHHHHHHHHHHHHSCBCCCTTSCHHHHHH
T ss_pred EEEEEeCCEEEEEeHHHHhcCCC---ceecccCCcccccCCCCcEEE-cCChHHHHHHHHHHhcCCCCCCCCcCHHHHHH
Confidence 37889999999998888865432 22222 1 11122334544 569999999999999998766554 3567888
Q ss_pred HhcccChhhHH
Q psy11333 114 AACLLQLVEIQ 124 (482)
Q Consensus 114 ~a~~~~~~~L~ 124 (482)
-|++|+++.+.
T Consensus 90 Ea~fy~i~~l~ 100 (124)
T 1s1g_A 90 ELAFYGILPEI 100 (124)
T ss_dssp HHHHTTCCGGG
T ss_pred HHHHcCCChHH
Confidence 99999998874
No 146
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=92.33 E-value=3.2 Score=38.22 Aligned_cols=133 Identities=17% Similarity=0.142 Sum_probs=68.2
Q ss_pred cEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCceeec
Q psy11333 288 EVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCD 365 (482)
Q Consensus 288 ~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 365 (482)
+..++.|+.. ..+..+|..+.+....-. ........+.+ ++..++.||.++ .+..||..+++-...
T Consensus 210 g~~l~sgs~D-----g~v~~wd~~~~~~~~~~~--~h~~~v~~v~~~p~~~~l~s~s~D~-----~v~lwd~~~~~~~~~ 277 (354)
T 2pbi_B 210 GNTFVSGGCD-----KKAMVWDMRSGQCVQAFE--THESDVNSVRYYPSGDAFASGSDDA-----TCRLYDLRADREVAI 277 (354)
T ss_dssp CCEEEEEETT-----SCEEEEETTTCCEEEEEC--CCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEE
T ss_pred CCEEEEEeCC-----CeEEEEECCCCcEEEEec--CCCCCeEEEEEeCCCCEEEEEeCCC-----eEEEEECCCCcEEEE
Confidence 4555666532 357888888776532211 11111222223 667788888663 688999987753322
Q ss_pred CCCCCCcccceeEEE--ECCEEEEEeccCCCcccCeEEEEeCCCCcee-ecCCCCCCccceEEEEE-CCEEEEEcCCCC
Q psy11333 366 VAPTTSCRTSVGVAV--LDGFLYAVGGQDGVQCLNHVERYDPKENKWS-RVAPMTTRRLGVAVAVL-GGFLYAIGGSDG 440 (482)
Q Consensus 366 ~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~ 440 (482)
... .........+. .++++.+.|+.+ ..+..||..+.+-. .+.. ......+++.. ++..++.|+.++
T Consensus 278 ~~~-~~~~~~~~~~~~s~~g~~l~~g~~d-----~~i~vwd~~~~~~~~~l~~--h~~~v~~l~~spdg~~l~sgs~D~ 348 (354)
T 2pbi_B 278 YSK-ESIIFGASSVDFSLSGRLLFAGYND-----YTINVWDVLKGSRVSILFG--HENRVSTLRVSPDGTAFCSGSWDH 348 (354)
T ss_dssp ECC-TTCCSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCSEEEEECC--CSSCEEEEEECTTSSCEEEEETTS
T ss_pred EcC-CCcccceeEEEEeCCCCEEEEEECC-----CcEEEEECCCCceEEEEEC--CCCcEEEEEECCCCCEEEEEcCCC
Confidence 011 11111222222 367788887754 35788988655421 1211 11111222222 677777777653
No 147
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=92.29 E-value=2.1 Score=38.94 Aligned_cols=119 Identities=13% Similarity=0.128 Sum_probs=67.1
Q ss_pred CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEE-ECCEEEEEeccCCCcccCeEEEEeCCCCceee
Q psy11333 334 NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAV-LDGFLYAVGGQDGVQCLNHVERYDPKENKWSR 412 (482)
Q Consensus 334 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 412 (482)
++.||+.+..+ ..+++||+.+++++.+ .... ...-.+++. -+|++|+.+..+. .....+.+||+.+.+...
T Consensus 55 ~g~l~~~~~~~-----~~i~~~d~~~~~~~~~-~~~~-~~~~~~i~~~~dg~l~v~~~~~~-~~~~~i~~~d~~~~~~~~ 126 (333)
T 2dg1_A 55 QGQLFLLDVFE-----GNIFKINPETKEIKRP-FVSH-KANPAAIKIHKDGRLFVCYLGDF-KSTGGIFAATENGDNLQD 126 (333)
T ss_dssp TSCEEEEETTT-----CEEEEECTTTCCEEEE-EECS-SSSEEEEEECTTSCEEEEECTTS-SSCCEEEEECTTSCSCEE
T ss_pred CCCEEEEECCC-----CEEEEEeCCCCcEEEE-eeCC-CCCcceEEECCCCcEEEEeCCCC-CCCceEEEEeCCCCEEEE
Confidence 67899887543 4799999999988765 2111 112233333 3678888764321 112478999998877653
Q ss_pred c-CCCCCCccceEEEEE-CCEEEEEcCCCC-CCCCCeEEEEeCCCCceeec
Q psy11333 413 V-APMTTRRLGVAVAVL-GGFLYAIGGSDG-QSPLNTVERFDPKLNRWTAM 460 (482)
Q Consensus 413 ~-~~~~~~r~~~~~~~~-~~~i~v~GG~~~-~~~~~~~~~y~~~~~~W~~~ 460 (482)
+ ...........++.. +|++|+...... ......+++||+++.+...+
T Consensus 127 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 127 IIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp EECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred EEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 2 222222222223332 678888654211 11234688888877665543
No 148
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=92.18 E-value=1.7 Score=40.78 Aligned_cols=144 Identities=17% Similarity=0.146 Sum_probs=75.4
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceeec
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCD 365 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 365 (482)
++..++.|+.+ ..+..+|..+.+-...-.. ....-.+++.. ++...+.|+.+ .++..||..+.+....
T Consensus 134 dg~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~~~~ 202 (393)
T 1erj_A 134 DGKFLATGAED-----RLIRIWDIENRKIVMILQG-HEQDIYSLDYFPSGDKLVSGSGD-----RTVRIWDLRTGQCSLT 202 (393)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEE
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcEEEEEcc-CCCCEEEEEEcCCCCEEEEecCC-----CcEEEEECCCCeeEEE
Confidence 56666666643 3578888887754322111 11111222222 56666777755 4789999998875433
Q ss_pred CCCCCCcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCC------CCCccceEEEEE-CCEEEEEc
Q psy11333 366 VAPTTSCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPM------TTRRLGVAVAVL-GGFLYAIG 436 (482)
Q Consensus 366 ~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~------~~~r~~~~~~~~-~~~i~v~G 436 (482)
-.... ...+++.. ++++++.|+.++ .+..||..+..-...-.. .......+++.. +++.++.|
T Consensus 203 -~~~~~--~v~~~~~~~~~~~~l~~~s~d~-----~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~ 274 (393)
T 1erj_A 203 -LSIED--GVTTVAVSPGDGKYIAAGSLDR-----AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 274 (393)
T ss_dssp -EECSS--CEEEEEECSTTCCEEEEEETTS-----CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEE
T ss_pred -EEcCC--CcEEEEEECCCCCEEEEEcCCC-----cEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEE
Confidence 11111 11222222 678888888654 577888877654322110 111112222222 66777777
Q ss_pred CCCCCCCCCeEEEEeCCC
Q psy11333 437 GSDGQSPLNTVERFDPKL 454 (482)
Q Consensus 437 G~~~~~~~~~~~~y~~~~ 454 (482)
+.+ +.+.+||..+
T Consensus 275 s~d-----~~v~~wd~~~ 287 (393)
T 1erj_A 275 SLD-----RSVKLWNLQN 287 (393)
T ss_dssp ETT-----SEEEEEEC--
T ss_pred eCC-----CEEEEEECCC
Confidence 765 3677777653
No 149
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=92.12 E-value=2.3 Score=43.44 Aligned_cols=118 Identities=16% Similarity=0.263 Sum_probs=72.3
Q ss_pred eEEEECCEEEEEecCCCCCCCCeEEEEeCCCCc--eeecCCCCCCc--------ccceeEEEECCEEEEEeccCCCcccC
Q psy11333 329 GVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQ--WSCDVAPTTSC--------RTSVGVAVLDGFLYAVGGQDGVQCLN 398 (482)
Q Consensus 329 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~--------r~~~~~~~~~~~lyv~GG~~~~~~~~ 398 (482)
+-++.++.||+.... ..++++|..+.+ |+.- ...+.. ....+.++.+++||+... -.
T Consensus 72 ~P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------dg 138 (677)
T 1kb0_A 72 TPVVVDGIMYVSASW------SVVHAIDTRTGNRIWTYD-PQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------DG 138 (677)
T ss_dssp CCEEETTEEEEECGG------GCEEEEETTTTEEEEEEC-CCCCGGGGGGSSSCSCCCCCEEETTEEEEECT------TS
T ss_pred CCEEECCEEEEECCC------CeEEEEECCCCcEEEEEc-CCCCccccccccccCCCCCceEECCEEEEEcC------CC
Confidence 345679999998752 468999998876 8865 322211 112345678899988643 14
Q ss_pred eEEEEeCCCC--ceeecCC-C-CC-CccceEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCCc--eee
Q psy11333 399 HVERYDPKEN--KWSRVAP-M-TT-RRLGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLNR--WTA 459 (482)
Q Consensus 399 ~~~~yd~~~~--~W~~~~~-~-~~-~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~~--W~~ 459 (482)
.+.++|..+. .|+.-.. - +. .....+.++.++.+|+..+.........++.||.++.+ |+.
T Consensus 139 ~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 139 RLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp EEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 6899998866 4876432 1 11 11222334568888876543211223679999988764 765
No 150
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=92.08 E-value=1.3 Score=40.50 Aligned_cols=142 Identities=11% Similarity=0.044 Sum_probs=73.3
Q ss_pred eeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCC-CcccceeEEE-
Q psy11333 304 SVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTT-SCRTSVGVAV- 380 (482)
Q Consensus 304 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~-~~r~~~~~~~- 380 (482)
.+|.+|+.+.++..+...........++.. +++||+.+.... ...+..||..+++++.+ .... .......++.
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~---~~~v~~~~~~~g~~~~~-~~~~~~~~~p~~~a~s 94 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDD---EGGIAAWQIDGQTAHKL-NTVVAPGTPPAYVAVD 94 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETT---EEEEEEEEEETTEEEEE-EEEEEESCCCSEEEEE
T ss_pred EEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCC---CceEEEEEecCCcEEEe-eeeecCCCCCEEEEEC
Confidence 578889988888664322222222233333 778888764211 24689999988887766 3211 1111122333
Q ss_pred ECCE-EEEEeccCCCcccCeEEEEeCC-CCceeecCCC------CCCc----cceEEEEE-CCEEEEEcCCCCCCCCCeE
Q psy11333 381 LDGF-LYAVGGQDGVQCLNHVERYDPK-ENKWSRVAPM------TTRR----LGVAVAVL-GGFLYAIGGSDGQSPLNTV 447 (482)
Q Consensus 381 ~~~~-lyv~GG~~~~~~~~~~~~yd~~-~~~W~~~~~~------~~~r----~~~~~~~~-~~~i~v~GG~~~~~~~~~~ 447 (482)
-+|+ ||+.+..+ ..+..||+. +.+...+... |.+| ..+.++.. +|++|+.+..+ +.+
T Consensus 95 pdg~~l~~~~~~~-----~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~-----~~v 164 (347)
T 3hfq_A 95 EARQLVYSANYHK-----GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS-----DKV 164 (347)
T ss_dssp TTTTEEEEEETTT-----TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT-----TEE
T ss_pred CCCCEEEEEeCCC-----CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC-----CEE
Confidence 3454 66665321 356677764 2233332211 1111 12223332 66777765433 468
Q ss_pred EEEeCC-CCceee
Q psy11333 448 ERFDPK-LNRWTA 459 (482)
Q Consensus 448 ~~y~~~-~~~W~~ 459 (482)
.+|+.. +.+...
T Consensus 165 ~~~~~~~~g~~~~ 177 (347)
T 3hfq_A 165 YVYNVSDAGQLSE 177 (347)
T ss_dssp EEEEECTTSCEEE
T ss_pred EEEEECCCCcEEE
Confidence 888887 455543
No 151
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=92.07 E-value=1.8 Score=39.80 Aligned_cols=138 Identities=17% Similarity=0.195 Sum_probs=71.1
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCc-ee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQ-WS 363 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~ 363 (482)
++..++.|+.. ..+..+|..+..+..+..+.........+.+ ++.+++.||.++ .+..||..+.. +.
T Consensus 72 ~g~~l~s~s~D-----~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~-----~v~iwd~~~~~~~~ 141 (345)
T 3fm0_A 72 CGNYLASASFD-----ATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK-----SVWVWEVDEEDEYE 141 (345)
T ss_dssp TSSEEEEEETT-----SCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEECTTSCEE
T ss_pred CCCEEEEEECC-----CcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCC-----eEEEEECCCCCCeE
Confidence 45566666643 2466677777666544433322222222232 677788888663 58889887653 32
Q ss_pred ecCCCCCCcccceeEEE--ECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCC-CccceEEEEE-CCEEEEEcCCC
Q psy11333 364 CDVAPTTSCRTSVGVAV--LDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTT-RRLGVAVAVL-GGFLYAIGGSD 439 (482)
Q Consensus 364 ~~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~-~r~~~~~~~~-~~~i~v~GG~~ 439 (482)
.+ ..+.........+. -++.+++.|+.++ .+..||..+..|.....+.. .....+++.. +++.++.|+.+
T Consensus 142 ~~-~~~~~h~~~v~~~~~~p~~~~l~s~s~d~-----~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 142 CV-SVLNSHTQDVKHVVWHPSQELLASASYDD-----TVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDD 215 (345)
T ss_dssp EE-EEECCCCSCEEEEEECSSSSCEEEEETTS-----CEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EE-EEecCcCCCeEEEEECCCCCEEEEEeCCC-----cEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCC
Confidence 22 11111111112222 2577788887653 57788888888765433221 1112222222 56677777765
Q ss_pred C
Q psy11333 440 G 440 (482)
Q Consensus 440 ~ 440 (482)
+
T Consensus 216 ~ 216 (345)
T 3fm0_A 216 R 216 (345)
T ss_dssp S
T ss_pred C
Confidence 3
No 152
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=92.01 E-value=4.4 Score=38.74 Aligned_cols=151 Identities=11% Similarity=0.072 Sum_probs=76.1
Q ss_pred CcEEEEeccccCCCCCceeEEEeCC--CCCee-eccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCce
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQ--SSDWK-IVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQW 362 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~--~~~W~-~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 362 (482)
+..|++.|+.. ..+..||.. +.... .+.....+..-.+++.. ++...+.|+.+ ..++.|+..+...
T Consensus 114 ~~~l~~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~-----g~v~~~~~~~~~~ 183 (450)
T 2vdu_B 114 ESRLIACADSD-----KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKF-----GDVYSIDINSIPE 183 (450)
T ss_dssp SSEEEEEEGGG-----TEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTSCCC
T ss_pred CCEEEEEECCC-----CeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCC-----CcEEEEecCCccc
Confidence 34556777643 356777776 44322 11110111111222222 66677777654 3688998876654
Q ss_pred ee-cCCCCCCcccc-eeE-EEEC---CEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEECCEEEEEc
Q psy11333 363 SC-DVAPTTSCRTS-VGV-AVLD---GFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVLGGFLYAIG 436 (482)
Q Consensus 363 ~~-~~~~~~~~r~~-~~~-~~~~---~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~G 436 (482)
.. ....+...... .++ ..-+ +++++.|+.+ ..+..||+.+.+....-.........+++..++.+++.|
T Consensus 184 ~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~sd~~~l~s~ 258 (450)
T 2vdu_B 184 EKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD-----EHIKISHYPQCFIVDKWLFGHKHFVSSICCGKDYLLLSA 258 (450)
T ss_dssp SSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT-----SCEEEEEESCTTCEEEECCCCSSCEEEEEECSTTEEEEE
T ss_pred ccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC-----CcEEEEECCCCceeeeeecCCCCceEEEEECCCCEEEEE
Confidence 32 10111111111 122 2335 7788888764 357888887665432211111111122222277788888
Q ss_pred CCCCCCCCCeEEEEeCCCCce
Q psy11333 437 GSDGQSPLNTVERFDPKLNRW 457 (482)
Q Consensus 437 G~~~~~~~~~~~~y~~~~~~W 457 (482)
|.+ ..+.+||..+.+.
T Consensus 259 ~~d-----~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 259 GGD-----DKIFAWDWKTGKN 274 (450)
T ss_dssp ESS-----SEEEEEETTTCCE
T ss_pred eCC-----CeEEEEECCCCcE
Confidence 755 4788999877653
No 153
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=91.95 E-value=3.9 Score=38.62 Aligned_cols=93 Identities=19% Similarity=0.272 Sum_probs=57.1
Q ss_pred ceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEE
Q psy11333 303 SSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAV 380 (482)
Q Consensus 303 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~ 380 (482)
+.|+.+|..+.+...+-.+........++.+ ++...+.|+.++ .+..||..+++-... +........+..
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg-----~v~iWd~~~~~~~~~---~~~h~~~v~~~s 196 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA-----EVQLWDVQQQKRLRN---MTSHSARVGSLS 196 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEE---ECCCSSCEEEEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCC-----eEEEEEcCCCcEEEE---EeCCCCceEEEe
Confidence 4799999999887655444333333333333 678888888664 689999988764332 111122234455
Q ss_pred ECCEEEEEeccCCCcccCeEEEEeCCCC
Q psy11333 381 LDGFLYAVGGQDGVQCLNHVERYDPKEN 408 (482)
Q Consensus 381 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~ 408 (482)
.++.+.+.|+.++ .+..+|..+.
T Consensus 197 ~~~~~l~sgs~d~-----~i~~~d~~~~ 219 (420)
T 4gga_A 197 WNSYILSSGSRSG-----HIHHHDVRVA 219 (420)
T ss_dssp EETTEEEEEETTS-----EEEEEETTSS
T ss_pred eCCCEEEEEeCCC-----ceeEeeeccc
Confidence 6788888887543 4666776543
No 154
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=91.88 E-value=1.4 Score=42.03 Aligned_cols=144 Identities=10% Similarity=0.068 Sum_probs=72.0
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCC-CceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRR-CGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~-~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
++.+++.|+.+ ..+..+|..++............ ...+++.. ++.+++.|+.++ .+..||..++.-..
T Consensus 176 ~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg-----~i~~wd~~~~~~~~ 245 (435)
T 4e54_B 176 NTNQFYASSME-----GTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVG-----NVILLNMDGKELWN 245 (435)
T ss_dssp CTTEEEEECSS-----SCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSS-----BEEEEESSSCBCCC
T ss_pred CCCEEEEEeCC-----CEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCC-----cEeeeccCcceeEE
Confidence 34455555532 35777888877654443322211 12233333 677888887653 68899987653222
Q ss_pred cCCCCCCcccceeEEEE---CCEEEEEeccCCCcccCeEEEEeCCCCceeecC--CCCCCccceEEEEE-CCEEEEEcCC
Q psy11333 365 DVAPTTSCRTSVGVAVL---DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVA--PMTTRRLGVAVAVL-GGFLYAIGGS 438 (482)
Q Consensus 365 ~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~r~~~~~~~~-~~~i~v~GG~ 438 (482)
+ .........+.+ +..+++.||.++ .+..||..+.+-.... .........+++.. ++..++.|+.
T Consensus 246 ~----~~h~~~v~~v~~~p~~~~~~~s~s~d~-----~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~ 316 (435)
T 4e54_B 246 L----RMHKKKVTHVALNPCCDWFLATASVDQ-----TVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQ 316 (435)
T ss_dssp S----BCCSSCEEEEEECTTCSSEEEEEETTS-----BCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEES
T ss_pred E----ecccceEEeeeecCCCceEEEEecCcc-----eeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcC
Confidence 2 111111222232 345777777543 4667887654422111 11111111122211 6677777776
Q ss_pred CCCCCCCeEEEEeCCC
Q psy11333 439 DGQSPLNTVERFDPKL 454 (482)
Q Consensus 439 ~~~~~~~~~~~y~~~~ 454 (482)
++ .+.+||..+
T Consensus 317 D~-----~i~iwd~~~ 327 (435)
T 4e54_B 317 KS-----EIRVYSASQ 327 (435)
T ss_dssp SS-----CEEEEESSS
T ss_pred CC-----EEEEEECCC
Confidence 53 577777654
No 155
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=91.86 E-value=2.8 Score=42.77 Aligned_cols=118 Identities=16% Similarity=0.236 Sum_probs=71.5
Q ss_pred eEEEECCEEEEEecCCCCCCCCeEEEEeCCCCc--eeecCCCCCCc--------ccceeEEEECCEEEEEeccCCCcccC
Q psy11333 329 GVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQ--WSCDVAPTTSC--------RTSVGVAVLDGFLYAVGGQDGVQCLN 398 (482)
Q Consensus 329 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~--------r~~~~~~~~~~~lyv~GG~~~~~~~~ 398 (482)
+-++.++.||+.... ..++++|..+.+ |+.- ...+.. ....+.++.+++||+... ..
T Consensus 61 ~P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg 127 (668)
T 1kv9_A 61 TPLFHDGVIYTSMSW------SRVIAVDAASGKELWRYD-PEVAKVKARTSCCDAVNRGVALWGDKVYVGTL------DG 127 (668)
T ss_dssp CCEEETTEEEEEEGG------GEEEEEETTTCCEEEEEC-CCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT------TS
T ss_pred CCEEECCEEEEECCC------CeEEEEECCCChhceEEC-CCCCccccccccccCCccceEEECCEEEEEcC------CC
Confidence 335679999998652 468999998776 8865 322211 012334667899887642 14
Q ss_pred eEEEEeCCCC--ceeecCCCCC--CccceEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCCc--eee
Q psy11333 399 HVERYDPKEN--KWSRVAPMTT--RRLGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLNR--WTA 459 (482)
Q Consensus 399 ~~~~yd~~~~--~W~~~~~~~~--~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~~--W~~ 459 (482)
.+.++|..|. .|+.-..-+. .....+.++.++.+|+-.+.........++.||+++.+ |+.
T Consensus 128 ~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 128 RLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp EEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEe
Confidence 6899998866 4876442211 11222335568888875432111233579999998764 865
No 156
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=91.84 E-value=7.1 Score=39.96 Aligned_cols=171 Identities=13% Similarity=0.024 Sum_probs=90.2
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCC-----------CCCCeEE
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQ-----------SYLNSIE 353 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~-----------~~~~~~~ 353 (482)
-+++.++++....+.....++.+|..+++...... .... ..+.+-. +|+-++++..+.. .....++
T Consensus 134 PDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~-~~~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~ 211 (710)
T 2xdw_A 134 EDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL-ERVK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLY 211 (710)
T ss_dssp TTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE-EEEC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEE
T ss_pred CCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc-cCcc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEE
Confidence 35555555443333333479999999988755311 1111 1223333 6654444443322 2345699
Q ss_pred EEeCCCCcee--ecCCCCCCcccceeE-EEECCEEEEEeccCCCcccCeEEEEeCCC------C--ceeecCCCCCCccc
Q psy11333 354 RYDPQTNQWS--CDVAPTTSCRTSVGV-AVLDGFLYAVGGQDGVQCLNHVERYDPKE------N--KWSRVAPMTTRRLG 422 (482)
Q Consensus 354 ~yd~~~~~W~--~~~~~~~~~r~~~~~-~~~~~~lyv~GG~~~~~~~~~~~~yd~~~------~--~W~~~~~~~~~r~~ 422 (482)
.++..+.+.+ .+......+....+. ..-+|+..+++...+....+.++.+|..+ . .|..+....... .
T Consensus 212 ~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~-~ 290 (710)
T 2xdw_A 212 YHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGE-Y 290 (710)
T ss_dssp EEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC-E
T ss_pred EEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcE-E
Confidence 9999887743 221111112222222 23356655554432222246889999875 3 577765432222 1
Q ss_pred eEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCC---ceeecC
Q psy11333 423 VAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLN---RWTAMA 461 (482)
Q Consensus 423 ~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~---~W~~~~ 461 (482)
.....-++.||+.++.++ ....++.+|..+. .|+.+.
T Consensus 291 ~~~s~dg~~l~~~s~~~~--~~~~l~~~d~~~~~~~~~~~l~ 330 (710)
T 2xdw_A 291 DYVTNEGTVFTFKTNRHS--PNYRLINIDFTDPEESKWKVLV 330 (710)
T ss_dssp EEEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGGCEEEE
T ss_pred EEEeccCCEEEEEECCCC--CCCEEEEEeCCCCCcccceecc
Confidence 222334678888876543 2467999998765 587764
No 157
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=91.80 E-value=1.4 Score=39.88 Aligned_cols=144 Identities=16% Similarity=0.119 Sum_probs=76.5
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CC-EEEEEecCCCCCCCCeEEEEeCCCCce-e
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-ND-LLYAVGGHDGQSYLNSIERYDPQTNQW-S 363 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W-~ 363 (482)
++.+|+.++.. ..+..+|+.+.+....-..+ ....+++.. ++ .+|+.+..+ ..+++||+.+++. .
T Consensus 9 ~~~~~v~~~~~-----~~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~~~ 76 (331)
T 3u4y_A 9 SNFGIVVEQHL-----RRISFFSTDTLEILNQITLG--YDFVDTAITSDCSNVVVTSDFC-----QTLVQIETQLEPPKV 76 (331)
T ss_dssp CCEEEEEEGGG-----TEEEEEETTTCCEEEEEECC--CCEEEEEECSSSCEEEEEESTT-----CEEEEEECSSSSCEE
T ss_pred CCEEEEEecCC-----CeEEEEeCcccceeeeEEcc--CCcceEEEcCCCCEEEEEeCCC-----CeEEEEECCCCceeE
Confidence 57788887532 47899999998875543332 222233332 45 477776533 3799999998875 2
Q ss_pred ecCCCCCCcccceeEEE-ECC-EEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CC-EEEEEcCCC
Q psy11333 364 CDVAPTTSCRTSVGVAV-LDG-FLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GG-FLYAIGGSD 439 (482)
Q Consensus 364 ~~~~~~~~~r~~~~~~~-~~~-~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~i~v~GG~~ 439 (482)
........++ .+++. -+| .+| .+...+. ...+..||+.+.+....-+ .+.....++.. +| .+|+.+..+
T Consensus 77 ~~~~~~~~~~--~~~~~s~dg~~l~-~~~~~~~--~~~i~v~d~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~ 149 (331)
T 3u4y_A 77 VAIQEGQSSM--ADVDITPDDQFAV-TVTGLNH--PFNMQSYSFLKNKFISTIP--IPYDAVGIAISPNGNGLILIDRSS 149 (331)
T ss_dssp EEEEECSSCC--CCEEECTTSSEEE-ECCCSSS--SCEEEEEETTTTEEEEEEE--CCTTEEEEEECTTSSCEEEEEETT
T ss_pred EecccCCCCc--cceEECCCCCEEE-EecCCCC--cccEEEEECCCCCeEEEEE--CCCCccceEECCCCCEEEEEecCC
Confidence 2202222222 21232 234 466 4332211 1379999998876544322 22222344443 44 477776543
Q ss_pred CCCCCCeEEEEeCC
Q psy11333 440 GQSPLNTVERFDPK 453 (482)
Q Consensus 440 ~~~~~~~~~~y~~~ 453 (482)
+ ..+.+|+..
T Consensus 150 ~----~~i~~~~~~ 159 (331)
T 3u4y_A 150 A----NTVRRFKID 159 (331)
T ss_dssp T----TEEEEEEEC
T ss_pred C----ceEEEEEEC
Confidence 2 125666644
No 158
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=91.77 E-value=2 Score=39.93 Aligned_cols=144 Identities=11% Similarity=0.001 Sum_probs=75.6
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCc-eeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCG-VGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
++.+++.|+.. ..+..+|..++.............. .+++.. ++..++.|+.+ ..+..||.....-..
T Consensus 130 ~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~ 199 (383)
T 3ei3_B 130 NTNQLFVSSIR-----GATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST-----GRLLLLGLDGHEIFK 199 (383)
T ss_dssp EEEEEEEEETT-----TEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETT-----SEEEEEETTSCEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCC-----CCEEEEECCCCEEEE
Confidence 34566666532 3678888887666554432211111 222232 66777777755 478999985444333
Q ss_pred cCCCCCCcccceeEEEE-CCE-EEEEeccCCCcccCeEEEEeCCC----CceeecCCCCCCccceEEEEE--CCEEEEEc
Q psy11333 365 DVAPTTSCRTSVGVAVL-DGF-LYAVGGQDGVQCLNHVERYDPKE----NKWSRVAPMTTRRLGVAVAVL--GGFLYAIG 436 (482)
Q Consensus 365 ~~~~~~~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~yd~~~----~~W~~~~~~~~~r~~~~~~~~--~~~i~v~G 436 (482)
+ ..... .-.+++.. ++. +++.|+.++ .+..||..+ ....... .......++... ++..++.|
T Consensus 200 ~-~~h~~--~v~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~l~~~ 269 (383)
T 3ei3_B 200 E-KLHKA--KVTHAEFNPRCDWLMATSSVDA-----TVKLWDLRNIKDKNSYIAEM--PHEKPVNAAYFNPTDSTKLLTT 269 (383)
T ss_dssp E-ECSSS--CEEEEEECSSCTTEEEEEETTS-----EEEEEEGGGCCSTTCEEEEE--ECSSCEEEEEECTTTSCEEEEE
T ss_pred e-ccCCC--cEEEEEECCCCCCEEEEEeCCC-----EEEEEeCCCCCcccceEEEe--cCCCceEEEEEcCCCCCEEEEE
Confidence 3 11111 11122222 344 788887543 577888876 2222211 122222233332 56777777
Q ss_pred CCCCCCCCCeEEEEeCCCC
Q psy11333 437 GSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 437 G~~~~~~~~~~~~y~~~~~ 455 (482)
+.+ +.+.+||..+.
T Consensus 270 ~~d-----~~i~iwd~~~~ 283 (383)
T 3ei3_B 270 DQR-----NEIRVYSSYDW 283 (383)
T ss_dssp ESS-----SEEEEEETTBT
T ss_pred cCC-----CcEEEEECCCC
Confidence 765 46888887643
No 159
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=91.61 E-value=5.4 Score=37.07 Aligned_cols=147 Identities=14% Similarity=0.144 Sum_probs=75.9
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCC--eeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCcee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSD--WKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWS 363 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 363 (482)
++.+++.|+.+ ..+..+|..... ...+.. ....-.+++.. ++..++.||.++ ++..||..+..-.
T Consensus 217 ~~~~l~sgs~D-----~~v~~wd~~~~~~~~~~~~~--h~~~v~~v~~~p~~~~l~s~s~D~-----~i~lwd~~~~~~~ 284 (380)
T 3iz6_a 217 NANMFISGSCD-----TTVRLWDLRITSRAVRTYHG--HEGDINSVKFFPDGQRFGTGSDDG-----TCRLFDMRTGHQL 284 (380)
T ss_dssp SCCEEEEEETT-----SCEEEEETTTTCCCCEEECC--CSSCCCEEEECTTSSEEEEECSSS-----CEEEEETTTTEEE
T ss_pred CCCEEEEEECC-----CeEEEEECCCCCcceEEECC--cCCCeEEEEEecCCCeEEEEcCCC-----eEEEEECCCCcEE
Confidence 45666776643 356777775321 111110 00111122222 667788888663 6889999887643
Q ss_pred ecCCCCCC----ccc-ceeEE-EECCEEEEEeccCCCcccCeEEEEeCCCCceee-cCCCCC---CccceEEEEECCEEE
Q psy11333 364 CDVAPTTS----CRT-SVGVA-VLDGFLYAVGGQDGVQCLNHVERYDPKENKWSR-VAPMTT---RRLGVAVAVLGGFLY 433 (482)
Q Consensus 364 ~~~~~~~~----~r~-~~~~~-~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~~~---~r~~~~~~~~~~~i~ 433 (482)
......+. ... -.+++ ..+|++++.|+.++ .+..||..+.+-.. +..+.. .+.......-++..+
T Consensus 285 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg-----~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l 359 (380)
T 3iz6_a 285 QVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG-----DCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSAL 359 (380)
T ss_dssp EEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS-----CEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEE
T ss_pred EEecccccccccccCceEEEEECCCCCEEEEEECCC-----CEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEE
Confidence 22011110 111 11222 33678888877543 58889987665432 222211 122222223377888
Q ss_pred EEcCCCCCCCCCeEEEEeCCCC
Q psy11333 434 AIGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 434 v~GG~~~~~~~~~~~~y~~~~~ 455 (482)
+.||.++ .+.+|+.+..
T Consensus 360 ~sgs~D~-----~i~iW~~~~~ 376 (380)
T 3iz6_a 360 CTGSWDK-----NLKIWAFSGH 376 (380)
T ss_dssp EEECTTS-----CEEEEECCSS
T ss_pred EEeeCCC-----CEEEEecCCC
Confidence 8888764 5777776643
No 160
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=91.57 E-value=0.068 Score=39.32 Aligned_cols=84 Identities=13% Similarity=0.139 Sum_probs=57.9
Q ss_pred EEEEeCCeEEeceeEEeeccC-HHHHHHhcCC-CCcCccceEEEccCCHHHHHHHHHHhhc-Ceeeecccc-HhhHHHHh
Q psy11333 40 VVLNVGARKIFAHRVVLSACS-PYFRAMFTGE-LAESRQAEVTIRDIDDVAMDNLIEFCYT-SHITVEESN-VQTLLPAA 115 (482)
Q Consensus 40 v~i~~~~~~~~~hk~iL~~~S-~~F~~~~~~~-~~e~~~~~i~l~~~~~~~~~~~l~~~y~-~~~~~~~~~-~~~ll~~a 115 (482)
|+|.|+|..|...+..|.... ..+..|++.. ......+.+-+ |=++..|..+|+|+.+ |.+.++.+- ...+++-|
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~Ea 81 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPVNVPLDVFSEEI 81 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCChHHHHHHHHHHhcCCcccCCCCCCHHHHHHHH
Confidence 688999999999888886432 2333333221 11122344444 6689999999999998 887665443 46688899
Q ss_pred cccChhhHH
Q psy11333 116 CLLQLVEIQ 124 (482)
Q Consensus 116 ~~~~~~~L~ 124 (482)
++|+++++.
T Consensus 82 ~fy~i~~~~ 90 (100)
T 1t1d_A 82 KFYELGENA 90 (100)
T ss_dssp HHTTCCHHH
T ss_pred HHcCCCHHH
Confidence 999998865
No 161
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=91.56 E-value=3 Score=37.40 Aligned_cols=143 Identities=17% Similarity=0.119 Sum_probs=72.3
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCce-eEEE-ECCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGV-GVAV-LNDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
++.+.+.|+.. ..+..+|..+..-... +....... ++.. -++...+.|+.+ ..+..||..+.+-..
T Consensus 24 ~~~~l~s~~~d-----g~v~lWd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~s~d-----~~i~vwd~~~~~~~~ 91 (304)
T 2ynn_A 24 TEPWVLTTLYS-----GRVELWNYETQVEVRS--IQVTETPVRAGKFIARKNWIIVGSDD-----FRIRVFNYNTGEKVV 91 (304)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEE--EECCSSCEEEEEEEGGGTEEEEEETT-----SEEEEEETTTCCEEE
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCceeEE--eeccCCcEEEEEEeCCCCEEEEECCC-----CEEEEEECCCCcEEE
Confidence 45566666633 3577888877654221 11111111 2222 366777778765 478999998775322
Q ss_pred cCCCCCCcccceeEEE-ECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCC-CCCccceEEEEE--CCEEEEEcCCCC
Q psy11333 365 DVAPTTSCRTSVGVAV-LDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPM-TTRRLGVAVAVL--GGFLYAIGGSDG 440 (482)
Q Consensus 365 ~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-~~~r~~~~~~~~--~~~i~v~GG~~~ 440 (482)
....- ...-.+++. -++.+++.|+.++ .+..||..+. |.....+ .......+++.. ++.+++.|+.+
T Consensus 92 ~~~~h--~~~v~~~~~~~~~~~l~sgs~D~-----~v~lWd~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D- 162 (304)
T 2ynn_A 92 DFEAH--PDYIRSIAVHPTKPYVLSGSDDL-----TVKLWNWENN-WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD- 162 (304)
T ss_dssp EEECC--SSCEEEEEECSSSSEEEEEETTS-----CEEEEEGGGT-TEEEEEECCCCSCEEEEEECTTCTTEEEEEETT-
T ss_pred EEeCC--CCcEEEEEEcCCCCEEEEECCCC-----eEEEEECCCC-cchhhhhcccCCcEEEEEECCCCCCEEEEEeCC-
Confidence 10111 111122222 2567777887653 5777887654 2111111 111122223332 45677888765
Q ss_pred CCCCCeEEEEeCCC
Q psy11333 441 QSPLNTVERFDPKL 454 (482)
Q Consensus 441 ~~~~~~~~~y~~~~ 454 (482)
..+.+||..+
T Consensus 163 ----~~v~iwd~~~ 172 (304)
T 2ynn_A 163 ----RTVKVWSLGQ 172 (304)
T ss_dssp ----SEEEEEETTC
T ss_pred ----CeEEEEECCC
Confidence 3677777643
No 162
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=91.54 E-value=3.7 Score=38.77 Aligned_cols=104 Identities=18% Similarity=0.149 Sum_probs=55.3
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
++.+++.|+.+ ..+..+|..+.+- +..+........++.+ ++..++.||.+ .++..||..+..-..
T Consensus 161 ~~~~l~sgs~D-----~~i~iwd~~~~~~--~~~~~~h~~~V~~v~~~p~~~~l~s~s~D-----~~i~~wd~~~~~~~~ 228 (410)
T 1vyh_C 161 SGKLLASCSAD-----MTIKLWDFQGFEC--IRTMHGHDHNVSSVSIMPNGDHIVSASRD-----KTIKMWEVQTGYCVK 228 (410)
T ss_dssp TSSEEEEEETT-----SCCCEEETTSSCE--EECCCCCSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCCEEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCce--eEEEcCCCCCEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEE
Confidence 45566666643 2456677765443 2222222222222233 56677778765 478999998876432
Q ss_pred cCCCCCCcccceeEEE--ECCEEEEEeccCCCcccCeEEEEeCCCCce
Q psy11333 365 DVAPTTSCRTSVGVAV--LDGFLYAVGGQDGVQCLNHVERYDPKENKW 410 (482)
Q Consensus 365 ~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W 410 (482)
.... .......+. -++.+++.||.++ .+..||..+...
T Consensus 229 ~~~~---h~~~v~~~~~~~~g~~l~s~s~D~-----~v~vwd~~~~~~ 268 (410)
T 1vyh_C 229 TFTG---HREWVRMVRPNQDGTLIASCSNDQ-----TVRVWVVATKEC 268 (410)
T ss_dssp EEEC---CSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCE
T ss_pred EEeC---CCccEEEEEECCCCCEEEEEcCCC-----eEEEEECCCCce
Confidence 2011 111111222 3577888887643 467788776654
No 163
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=91.53 E-value=0.11 Score=48.99 Aligned_cols=143 Identities=15% Similarity=0.174 Sum_probs=57.2
Q ss_pred CCCCcEEEEeccccCCCCCceeEEEeCCCCC--eeeccCCCCCCCceeEEEECCEEEEEecCCCCCCCCeEEEEeCCCC-
Q psy11333 284 SRRGEVLFAVGGWCSGDAISSVERYDPQSSD--WKIVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTN- 360 (482)
Q Consensus 284 ~~~~~~l~~~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~- 360 (482)
++.++.||+.+.. ..++.+|..+.+ |+.-. .....+.++.++.+|+.|+.+ ..++++|..++
T Consensus 6 ~v~~~~v~~gs~d------g~v~a~d~~tG~~~W~~~~----~~~~s~p~~~~g~~~v~~s~d-----g~l~a~d~~tG~ 70 (369)
T 2hz6_A 6 TLPETLLFVSTLD------GSLHAVSKRTGSIKWTLKE----DPVLQVPTHVEEPAFLPDPND-----GSLYTLGSKNNE 70 (369)
T ss_dssp --CTTEEEEEETT------SEEEEEETTTCCEEEEEEC----CCSCCCC-----CCEEECTTT-----CCEEEC-----C
T ss_pred eeeCCEEEEEcCC------CEEEEEECCCCCEEEEecC----CCceecceEcCCCEEEEeCCC-----CEEEEEECCCCc
Confidence 4456777766431 368999988764 76533 111122334577788887544 35899998765
Q ss_pred -ceeecCCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCC--ceeecCCCCCCccceEEEEECCEEEEEcC
Q psy11333 361 -QWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKEN--KWSRVAPMTTRRLGVAVAVLGGFLYAIGG 437 (482)
Q Consensus 361 -~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~r~~~~~~~~~~~i~v~GG 437 (482)
.|+.- ...+.......+...++.+|+ |+. ...+.++|+.+. .|+.-..-. .+ .+..++.+|+. +
T Consensus 71 ~~w~~~-~~~~~~~~~sp~~~~~~~v~~-g~~-----dg~v~a~D~~tG~~~w~~~~~~~-~~----~~p~~~~v~~~-~ 137 (369)
T 2hz6_A 71 GLTKLP-FTIPELVQASPCRSSDGILYM-GKK-----QDIWYVIDLLTGEKQQTLSSAFA-DS----LSPSTSLLYLG-R 137 (369)
T ss_dssp CSEECS-CCHHHHHTTCSCC-----CCC-CEE-----EEEEEEECCC---------------------------EEEE-E
T ss_pred eeeeee-ccCccccccCceEecCCEEEE-EeC-----CCEEEEEECCCCcEEEEecCCCc-cc----ccccCCEEEEE-e
Confidence 46532 111111111111124555554 332 135888988765 465432211 11 11134455553 3
Q ss_pred CCCCCCCCeEEEEeCCCC--ceee
Q psy11333 438 SDGQSPLNTVERFDPKLN--RWTA 459 (482)
Q Consensus 438 ~~~~~~~~~~~~y~~~~~--~W~~ 459 (482)
.+ ..+..||+++. .|+.
T Consensus 138 ~d-----g~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 138 TE-----YTITMYDTKTRELRWNA 156 (369)
T ss_dssp EE-----EEEECCCSSSSSCCCEE
T ss_pred cC-----CEEEEEECCCCCEEEeE
Confidence 22 35788887655 3764
No 164
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=91.46 E-value=4 Score=36.19 Aligned_cols=148 Identities=10% Similarity=-0.016 Sum_probs=80.0
Q ss_pred CCCcEEEEeccccCCCCCceeEEEeCCCC-CeeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCc-
Q psy11333 285 RRGEVLFAVGGWCSGDAISSVERYDPQSS-DWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQ- 361 (482)
Q Consensus 285 ~~~~~l~~~GG~~~~~~~~~~~~~d~~~~-~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~- 361 (482)
..++.+++.+. +.+..||+..+ .|+.-.+ .....+++... +|.+++..+.+ ...++.+|+..+.
T Consensus 45 ~pdG~ilvs~~-------~~V~~~d~~G~~~W~~~~~--~~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~Gk~l 111 (276)
T 3no2_A 45 TKAGEILFSYS-------KGAKMITRDGRELWNIAAP--AGCEMQTARILPDGNALVAWCGH----PSTILEVNMKGEVL 111 (276)
T ss_dssp CTTSCEEEECB-------SEEEEECTTSCEEEEEECC--TTCEEEEEEECTTSCEEEEEEST----TEEEEEECTTSCEE
T ss_pred CCCCCEEEeCC-------CCEEEECCCCCEEEEEcCC--CCccccccEECCCCCEEEEecCC----CCEEEEEeCCCCEE
Confidence 34677777432 45899999333 3654332 11122344443 77777765431 2468888986543
Q ss_pred eeec-CCCCCCc--ccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCC-ceeecCCCCCCccceEEEEE-CCEEEEEc
Q psy11333 362 WSCD-VAPTTSC--RTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKEN-KWSRVAPMTTRRLGVAVAVL-GGFLYAIG 436 (482)
Q Consensus 362 W~~~-~~~~~~~--r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~r~~~~~~~~-~~~i~v~G 436 (482)
|+.- ....+.+ .........+|.+++.... ...+.+||++.+ .|+.-.+ . ..+++... +|.+++.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~-----~~~v~~~d~~G~~~w~~~~~-~---~~~~~~~~~~g~~~v~~ 182 (276)
T 3no2_A 112 SKTEFETGIERPHAQFRQINKNKKGNYLVPLFA-----TSEVREIAPNGQLLNSVKLS-G---TPFSSAFLDNGDCLVAC 182 (276)
T ss_dssp EEEEECCSCSSGGGSCSCCEECTTSCEEEEETT-----TTEEEEECTTSCEEEEEECS-S---CCCEEEECTTSCEEEEC
T ss_pred EEEeccCCCCcccccccCceECCCCCEEEEecC-----CCEEEEECCCCCEEEEEECC-C---CccceeEcCCCCEEEEe
Confidence 5432 1111111 1122333446777766542 246899999733 4665432 1 12233334 77888887
Q ss_pred CCCCCCCCCeEEEEeCCCC--ceee
Q psy11333 437 GSDGQSPLNTVERFDPKLN--RWTA 459 (482)
Q Consensus 437 G~~~~~~~~~~~~y~~~~~--~W~~ 459 (482)
..+ ..+..+|+++. .|+.
T Consensus 183 ~~~-----~~v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 183 GDA-----HCFVQLNLESNRIVRRV 202 (276)
T ss_dssp BTT-----SEEEEECTTTCCEEEEE
T ss_pred CCC-----CeEEEEeCcCCcEEEEe
Confidence 653 46899999855 3665
No 165
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=91.45 E-value=1 Score=42.59 Aligned_cols=133 Identities=14% Similarity=0.108 Sum_probs=70.6
Q ss_pred ceeEEEeCCCCCeeeccCCCCCCCceeEEE--ECCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEE
Q psy11333 303 SSVERYDPQSSDWKIVAPMSKRRCGVGVAV--LNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAV 380 (482)
Q Consensus 303 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~ 380 (482)
..+..||..+.+.. ..+... ....+.. .++..++.|+.++ .+..||..+.+-...... ....-.+++.
T Consensus 78 ~~v~i~d~~~~~~~--~~~~~~-~~~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~--h~~~v~~~~~ 147 (420)
T 3vl1_A 78 GHDFLFNTIIRDGS--KMLKRA-DYTAVDTAKLQMRRFILGTTEG-----DIKVLDSNFNLQREIDQA--HVSEITKLKF 147 (420)
T ss_dssp TEEEEEECCSEETT--TTSCSC-CEEEEEEECSSSCEEEEEETTS-----CEEEECTTSCEEEEETTS--SSSCEEEEEE
T ss_pred CcEEEEEeccccee--eEEecC-CceEEEEEecCCCEEEEEECCC-----CEEEEeCCCcceeeeccc--ccCccEEEEE
Confidence 36788887654432 122222 1122222 3777888887653 689999887764433111 1111122222
Q ss_pred E-CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCEEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 381 L-DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGFLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 381 ~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
. ++++++.|+.++ .+..||..+.+-...-. .......+++.. ++..++.|+.++ .+.+||..+.+
T Consensus 148 ~~~~~~l~s~s~d~-----~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~ 214 (420)
T 3vl1_A 148 FPSGEALISSSQDM-----QLKIWSVKDGSNPRTLI-GHRATVTDIAIIDRGRNVLSASLDG-----TIRLWECGTGT 214 (420)
T ss_dssp CTTSSEEEEEETTS-----EEEEEETTTCCCCEEEE-CCSSCEEEEEEETTTTEEEEEETTS-----CEEEEETTTTE
T ss_pred CCCCCEEEEEeCCC-----eEEEEeCCCCcCceEEc-CCCCcEEEEEEcCCCCEEEEEcCCC-----cEEEeECCCCc
Confidence 2 577777877543 58889987654211111 111122233333 667777777653 57888887654
No 166
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=91.38 E-value=5.3 Score=33.35 Aligned_cols=141 Identities=11% Similarity=0.049 Sum_probs=75.3
Q ss_pred CCCcEEEEeccccCCCCCceeEEEeCCCCC--e-eec----cCCCCCCCceeEEE--ECCEEEEEecCCCCCCCCeEEEE
Q psy11333 285 RRGEVLFAVGGWCSGDAISSVERYDPQSSD--W-KIV----APMSKRRCGVGVAV--LNDLLYAVGGHDGQSYLNSIERY 355 (482)
Q Consensus 285 ~~~~~l~~~GG~~~~~~~~~~~~~d~~~~~--W-~~~----~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~y 355 (482)
...+++|++-| +.+|+++..... . ..+ +.+|. ..-+++ .++++|++-| +..++|
T Consensus 13 ~~~g~~~fFkg-------~~~w~~~~~~~~~gyP~~I~~~w~glP~---~iDAa~~~~~g~~yfFkg-------~~yw~~ 75 (196)
T 3c7x_A 13 MLRGEMFVFKE-------RWFWRVRNNQVMDGYPMPIGQFWRGLPA---SINTAYERKDGKFVFFKG-------DKHWVF 75 (196)
T ss_dssp EETTEEEEEET-------TEEEEEETTEECTTCSEEHHHHSTTCCS---SCCEEEECTTSCEEEEET-------TEEEEE
T ss_pred EcCCEEEEEEC-------CEEEEEECCccCCCCceEhhHhccCCCC---CccEEEEeCCCcEEEecC-------CEEEEE
Confidence 45788999987 456777543210 0 111 12343 223333 4789999987 467888
Q ss_pred eCCCCce---eec---CCCCCCcccceeEEE-ECCEEEEEeccCCCcccCeEEEEeCCCCceee-----cCCC-CCCccc
Q psy11333 356 DPQTNQW---SCD---VAPTTSCRTSVGVAV-LDGFLYAVGGQDGVQCLNHVERYDPKENKWSR-----VAPM-TTRRLG 422 (482)
Q Consensus 356 d~~~~~W---~~~---~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~-----~~~~-~~~r~~ 422 (482)
+..+... +.+ .+.+|...-.++... .++++|.+-| +..++||..+++-.. +... ..|...
T Consensus 76 ~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG-------~~yw~yd~~~~~v~~gyPk~i~~~~gip~~i 148 (196)
T 3c7x_A 76 DEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG-------NKYYRFNEELRAVDSEYPKNIKVWEGIPESP 148 (196)
T ss_dssp ETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECTTCSEEGGGSBTCCSSC
T ss_pred eCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC-------CEEEEEeCCcccccCCCCccHHHCCCcCCCc
Confidence 8643221 011 012332222222221 2689999976 457888886643211 1111 112223
Q ss_pred eEEEEE-CC-EEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 423 VAVAVL-GG-FLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 423 ~~~~~~-~~-~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
.++... ++ ++|++-| +..++||..+.+
T Consensus 149 daAf~~~~~~~~YfFkg-------~~y~r~d~~~~~ 177 (196)
T 3c7x_A 149 RGSFMGSDEVFTYFYKG-------NKYWKFNNQKLK 177 (196)
T ss_dssp SEEEECTTSSEEEEEET-------TEEEEEETTTTE
T ss_pred ceeEEecCCCEEEEEEC-------CEEEEEECCcce
Confidence 344444 44 8999988 467999987654
No 167
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=91.35 E-value=6.3 Score=37.61 Aligned_cols=122 Identities=16% Similarity=0.222 Sum_probs=66.8
Q ss_pred eeEEEeCCCCCeeeccCCCCCCCceeEEEECCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEECC
Q psy11333 304 SVERYDPQSSDWKIVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDG 383 (482)
Q Consensus 304 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~ 383 (482)
.+..||..+.+-. ..+...........+++...+.|+.++ .+.+||..+..-... .. ............++
T Consensus 333 ~i~vwd~~~~~~~--~~~~~h~~~v~~~~~~~~~l~s~s~dg-----~v~vwd~~~~~~~~~-~~-~~~~~~~~~~~~~~ 403 (464)
T 3v7d_B 333 TIRIWDLENGELM--YTLQGHTALVGLLRLSDKFLVSAAADG-----SIRGWDANDYSRKFS-YH-HTNLSAITTFYVSD 403 (464)
T ss_dssp CEEEEETTTTEEE--EEECCCSSCEEEEEECSSEEEEEETTS-----EEEEEETTTCCEEEE-EE-CTTCCCEEEEEECS
T ss_pred cEEEEECCCCcEE--EEEeCCCCcEEEEEEcCCEEEEEeCCC-----cEEEEECCCCceeee-ec-CCCCccEEEEEeCC
Confidence 4677777665432 122222223344445677777787653 689999987653322 11 11122233445678
Q ss_pred EEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEECCEEEEEcCCCC
Q psy11333 384 FLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVLGGFLYAIGGSDG 440 (482)
Q Consensus 384 ~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~ 440 (482)
.+.+.|+ + ..+..||..+.+-......+.......+...++.+++.|+.++
T Consensus 404 ~~l~~~~-d-----g~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~~l~~~~~~~g 454 (464)
T 3v7d_B 404 NILVSGS-E-----NQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDG 454 (464)
T ss_dssp SEEEEEE-T-----TEEEEEETTTCCEEESCTTTTCSEEEEEEEETTEEEEEEEETT
T ss_pred CEEEEec-C-----CeEEEEECCCCcEEehhhccCCCcEEEEEecCCEEEEEEEeCC
Confidence 8888876 2 3688999988765443223333233333444556666665543
No 168
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=91.34 E-value=5.9 Score=39.28 Aligned_cols=131 Identities=15% Similarity=0.166 Sum_probs=72.2
Q ss_pred ceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCC-cccceeEE
Q psy11333 303 SSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTS-CRTSVGVA 379 (482)
Q Consensus 303 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~-~r~~~~~~ 379 (482)
..+..||..+.+... ..+...........+ ++...+.|+.++ .+.+||..+.+-... +.. .......+
T Consensus 467 ~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~dg-----~i~iw~~~~~~~~~~---~~~~h~~~v~~~ 537 (615)
T 1pgu_A 467 NTIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVMG-----KILLYDLQSREVKTS---RWAFRTSKINAI 537 (615)
T ss_dssp SCEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEC---CSCCCSSCEEEE
T ss_pred CeEEEEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCCCC-----eEEEeeCCCCcceeE---eecCCCCceeEE
Confidence 357888888776543 222222222333333 778888887653 589999987764322 211 11122222
Q ss_pred EE------------CCEEEEEeccCCCcccCeEEEEeCCCC-c-eeecCCCCCCccceEEEEECCEEEEEcCCCCCCCCC
Q psy11333 380 VL------------DGFLYAVGGQDGVQCLNHVERYDPKEN-K-WSRVAPMTTRRLGVAVAVLGGFLYAIGGSDGQSPLN 445 (482)
Q Consensus 380 ~~------------~~~lyv~GG~~~~~~~~~~~~yd~~~~-~-W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~ 445 (482)
.+ ++++++.|+.++ .+..||..+. + ...+... ..........-++. ++.||.++
T Consensus 538 ~~sp~~~~~~~~~~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~h-~~~v~~l~~s~~~~-l~s~~~d~----- 605 (615)
T 1pgu_A 538 SWKPAEKGANEEEIEEDLVATGSLDT-----NIFIYSVKRPMKIIKALNAH-KDGVNNLLWETPST-LVSSGADA----- 605 (615)
T ss_dssp EECCCC------CCSCCEEEEEETTS-----CEEEEESSCTTCCEEETTSS-TTCEEEEEEEETTE-EEEEETTS-----
T ss_pred EEcCccccccccccCCCEEEEEcCCC-----cEEEEECCCCceechhhhcC-ccceEEEEEcCCCC-eEEecCCc-----
Confidence 22 678888887653 6888998875 2 2222211 11112223334778 77777654
Q ss_pred eEEEEeCCC
Q psy11333 446 TVERFDPKL 454 (482)
Q Consensus 446 ~~~~y~~~~ 454 (482)
.+.+||.++
T Consensus 606 ~v~iw~~~~ 614 (615)
T 1pgu_A 606 CIKRWNVVL 614 (615)
T ss_dssp CEEEEEEC-
T ss_pred eEEEEeeec
Confidence 577777654
No 169
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=91.22 E-value=3.1 Score=41.49 Aligned_cols=119 Identities=18% Similarity=0.228 Sum_probs=70.9
Q ss_pred eEEEECCEEEEEecCCCCCCCCeEEEEeC-CCCc--eeecCCCCCCc--------ccceeEEEECCEEEEEeccCCCccc
Q psy11333 329 GVAVLNDLLYAVGGHDGQSYLNSIERYDP-QTNQ--WSCDVAPTTSC--------RTSVGVAVLDGFLYAVGGQDGVQCL 397 (482)
Q Consensus 329 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~-~~~~--W~~~~~~~~~~--------r~~~~~~~~~~~lyv~GG~~~~~~~ 397 (482)
+-++.++.||+....+ ..++++|. .+.+ |+.- .+.+.. ....+.++.+++||+..+ -
T Consensus 57 ~P~v~~g~vyv~~~~~-----~~v~AlD~~~tG~~~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------d 124 (571)
T 2ad6_A 57 APLVIGDMMYVHSAFP-----NNTYALNLNDPGKIVWQHK-PKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------N 124 (571)
T ss_dssp CCEEETTEEEEECSTT-----TCEEEEETTCTTSEEEEEC-CCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------T
T ss_pred ccEEECCEEEEEeCCC-----CEEEEEeCCCCccEEEEEc-CCCCccccccccccccccccEEECCEEEEEeC------C
Confidence 3446799999986521 36999999 7765 9865 222211 112345678999998743 1
Q ss_pred CeEEEEeCCCC--ceeecCCC-CCC-ccceEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCC--ceee
Q psy11333 398 NHVERYDPKEN--KWSRVAPM-TTR-RLGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLN--RWTA 459 (482)
Q Consensus 398 ~~~~~yd~~~~--~W~~~~~~-~~~-r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~--~W~~ 459 (482)
..+.++|..+. .|+.-..- +.. ....+.++.++.+|+-.+.........++.||+++. .|+.
T Consensus 125 g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 125 GHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 46899998866 58753221 111 112233456888887654211111357999998765 4764
No 170
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=91.06 E-value=8.8 Score=34.87 Aligned_cols=150 Identities=14% Similarity=0.098 Sum_probs=76.7
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCcee--
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWS-- 363 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-- 363 (482)
++.+++.|+.+ ..+..||..+.+-...........-.+++.. ++.+++.|+.++ .+..||..+.+-.
T Consensus 138 ~~~~l~s~s~d-----g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg-----~i~iwd~~~~~~~~~ 207 (343)
T 3lrv_A 138 NTEYFIWADNR-----GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDG-----ILDVYNLSSPDQASS 207 (343)
T ss_dssp -CCEEEEEETT-----CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTS-----CEEEEESSCTTSCCE
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCC-----EEEEEECCCCCCCcc
Confidence 45666666633 3578889888776433322222222233332 778888888653 6899999887643
Q ss_pred ecCCCCCCcccceeEEE-ECCEEEEEeccCCCcccCeEEEEeCCCCcee-ecCCCC---CCccceEEEEE-CCEEEEEcC
Q psy11333 364 CDVAPTTSCRTSVGVAV-LDGFLYAVGGQDGVQCLNHVERYDPKENKWS-RVAPMT---TRRLGVAVAVL-GGFLYAIGG 437 (482)
Q Consensus 364 ~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~~---~~r~~~~~~~~-~~~i~v~GG 437 (482)
.+ .. .....-.++.. -++..++.|+. ..+..||+.+.+-. .+.... .+....+++.. +++.++.|+
T Consensus 208 ~~-~~-~h~~~v~~l~fs~~g~~l~s~~~------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s 279 (343)
T 3lrv_A 208 RF-PV-DEEAKIKEVKFADNGYWMVVECD------QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYS 279 (343)
T ss_dssp EC-CC-CTTSCEEEEEECTTSSEEEEEES------SBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEE
T ss_pred EE-ec-cCCCCEEEEEEeCCCCEEEEEeC------CeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEec
Confidence 22 11 01111112222 25777777762 26888998765421 111111 11111122222 566666644
Q ss_pred C-CCCCCCCeEEEEeC--CCCceee
Q psy11333 438 S-DGQSPLNTVERFDP--KLNRWTA 459 (482)
Q Consensus 438 ~-~~~~~~~~~~~y~~--~~~~W~~ 459 (482)
. + +.+.+|+. ..+.|+.
T Consensus 280 ~~d-----~~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 280 NES-----NSLTIYKFDKKTKNWTK 299 (343)
T ss_dssp TTT-----TEEEEEEECTTTCSEEE
T ss_pred CCC-----CcEEEEEEcccccceEe
Confidence 3 3 24555544 6678987
No 171
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=90.87 E-value=5.4 Score=36.58 Aligned_cols=112 Identities=10% Similarity=0.135 Sum_probs=55.9
Q ss_pred CcEEEEeccccCC-CCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CC-EEEEEecCCCCCCCCeE--EEEeCCCCc
Q psy11333 287 GEVLFAVGGWCSG-DAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-ND-LLYAVGGHDGQSYLNSI--ERYDPQTNQ 361 (482)
Q Consensus 287 ~~~l~~~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~--~~yd~~~~~ 361 (482)
+...+++|.+... ..--.+|.+|+.+.+++.+... .......++.. ++ .||+.+..+. ....+ +.+++.+++
T Consensus 12 ~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~--~~~~v~~~~~~~~~g~ 88 (361)
T 3scy_A 12 SELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSK--DQAAVSAFAFDKEKGT 88 (361)
T ss_dssp GEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSS--TTCEEEEEEEETTTTE
T ss_pred CceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCC--CCCcEEEEEEeCCCCc
Confidence 3455566766432 1122467778888888766544 22222233333 44 4776654321 12344 555666677
Q ss_pred eeecCCCCCC-cccceeEEEECCE-EEEEeccCCCcccCeEEEEeCCCC
Q psy11333 362 WSCDVAPTTS-CRTSVGVAVLDGF-LYAVGGQDGVQCLNHVERYDPKEN 408 (482)
Q Consensus 362 W~~~~~~~~~-~r~~~~~~~~~~~-lyv~GG~~~~~~~~~~~~yd~~~~ 408 (482)
.+.+ ...+. ......++. +++ +|+.+.. + ..+..|+..++
T Consensus 89 ~~~~-~~~~~~~~~p~~~~~-dg~~l~~~~~~-~----~~v~~~~~~~~ 130 (361)
T 3scy_A 89 LHLL-NTQKTMGADPCYLTT-NGKNIVTANYS-G----GSITVFPIGQD 130 (361)
T ss_dssp EEEE-EEEECSSSCEEEEEE-CSSEEEEEETT-T----TEEEEEEBCTT
T ss_pred EEEe-eEeccCCCCcEEEEE-CCCEEEEEECC-C----CEEEEEEeCCC
Confidence 7665 32221 112223333 555 6655432 1 35778887643
No 172
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=90.85 E-value=3.7 Score=37.40 Aligned_cols=148 Identities=13% Similarity=0.054 Sum_probs=73.5
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
++.+++.|+.. ..+..||..+.+-... +.........+.+ ++..++.|+.+ ..+..||..+.+...
T Consensus 43 ~~~~l~~~~~d-----g~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~ 110 (369)
T 3zwl_B 43 EGDLLFSCSKD-----SSASVWYSLNGERLGT--LDGHTGTIWSIDVDCFTKYCVTGSAD-----YSIKLWDVSNGQCVA 110 (369)
T ss_dssp TSCEEEEEESS-----SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----TEEEEEETTTCCEEE
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCchhhhh--hhhcCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcEEE
Confidence 45566666532 3578888877654321 2211222222222 56677777765 378999998887554
Q ss_pred cCCCCCCcccceeEE-EECCEEEEEeccCCCcccCeEEEEeCCCCc----eeecCCCC-------CCccceEEEEE--CC
Q psy11333 365 DVAPTTSCRTSVGVA-VLDGFLYAVGGQDGVQCLNHVERYDPKENK----WSRVAPMT-------TRRLGVAVAVL--GG 430 (482)
Q Consensus 365 ~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~----W~~~~~~~-------~~r~~~~~~~~--~~ 430 (482)
. -..+.+ -.++. .-+++.++.++.+.......+..||..+.. +.....-+ ........+.+ ++
T Consensus 111 ~-~~~~~~--v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (369)
T 3zwl_B 111 T-WKSPVP--VKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKG 187 (369)
T ss_dssp E-EECSSC--EEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGG
T ss_pred E-eecCCC--eEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCC
Confidence 3 121111 11222 225666666654411222457777765442 11111100 00001222222 56
Q ss_pred EEEEEcCCCCCCCCCeEEEEeCCC
Q psy11333 431 FLYAIGGSDGQSPLNTVERFDPKL 454 (482)
Q Consensus 431 ~i~v~GG~~~~~~~~~~~~y~~~~ 454 (482)
..++.|+.+ ..+.+||..+
T Consensus 188 ~~l~~~~~d-----g~i~i~d~~~ 206 (369)
T 3zwl_B 188 KYIIAGHKD-----GKISKYDVSN 206 (369)
T ss_dssp CEEEEEETT-----SEEEEEETTT
T ss_pred CEEEEEcCC-----CEEEEEECCC
Confidence 677777665 3688888775
No 173
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=90.85 E-value=5.6 Score=39.34 Aligned_cols=146 Identities=10% Similarity=-0.043 Sum_probs=74.7
Q ss_pred CCCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CC-EEEEEecCCCCCCCCeEEEEeC--CCC
Q psy11333 285 RRGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-ND-LLYAVGGHDGQSYLNSIERYDP--QTN 360 (482)
Q Consensus 285 ~~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~--~~~ 360 (482)
..++.+|+.+... ..+..+|..+.+-... ++.+..-|+++.. ++ .+|+.+. + +++..||+ .+.
T Consensus 146 ~p~~~~~vs~~~d-----~~V~v~D~~t~~~~~~--i~~g~~~~~v~~spdg~~l~v~~~-d-----~~V~v~D~~~~t~ 212 (543)
T 1nir_A 146 DLPNLFSVTLRDA-----GQIALVDGDSKKIVKV--IDTGYAVHISRMSASGRYLLVIGR-D-----ARIDMIDLWAKEP 212 (543)
T ss_dssp CGGGEEEEEEGGG-----TEEEEEETTTCCEEEE--EECSTTEEEEEECTTSCEEEEEET-T-----SEEEEEETTSSSC
T ss_pred CCCCEEEEEEcCC-----CeEEEEECCCceEEEE--EecCcccceEEECCCCCEEEEECC-C-----CeEEEEECcCCCC
Confidence 3467888887532 4688899988765322 2222224454443 44 5666543 2 57999999 665
Q ss_pred ceeecCCCCCCcccceeEEEE-----CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCC-----------CCCccceE
Q psy11333 361 QWSCDVAPTTSCRTSVGVAVL-----DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPM-----------TTRRLGVA 424 (482)
Q Consensus 361 ~W~~~~~~~~~~r~~~~~~~~-----~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-----------~~~r~~~~ 424 (482)
+-.. .++....-.+++.. +|+..++++.. ...+..||..+.+-...-+. +.+|....
T Consensus 213 ~~~~---~i~~g~~p~~va~sp~~~~dg~~l~v~~~~----~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i 285 (543)
T 1nir_A 213 TKVA---EIKIGIEARSVESSKFKGYEDRYTIAGAYW----PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAI 285 (543)
T ss_dssp EEEE---EEECCSEEEEEEECCSTTCTTTEEEEEEEE----SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEE
T ss_pred cEEE---EEecCCCcceEEeCCCcCCCCCEEEEEEcc----CCeEEEEeccccccceeecccCcccCccccccCCceEEE
Confidence 4322 12222222334433 55544444432 24677888876643222111 12222222
Q ss_pred EEEE-CCEEEEEcCCCCCCCCCeEEEEeCCCC
Q psy11333 425 VAVL-GGFLYAIGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 425 ~~~~-~~~i~v~GG~~~~~~~~~~~~y~~~~~ 455 (482)
.... ++.+|+.+..+ +.++.+|..+.
T Consensus 286 ~~s~~~~~~~vs~~~~-----g~i~vvd~~~~ 312 (543)
T 1nir_A 286 IASHEHPEFIVNVKET-----GKVLLVNYKDI 312 (543)
T ss_dssp EECSSSSEEEEEETTT-----TEEEEEECTTS
T ss_pred EECCCCCEEEEEECCC-----CeEEEEEecCC
Confidence 2222 34555554332 57888887654
No 174
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=90.84 E-value=8.8 Score=36.54 Aligned_cols=156 Identities=7% Similarity=-0.065 Sum_probs=78.7
Q ss_pred cEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEECCEEEEEecCCCCCCCCeEEEEeCCCCceeecCC
Q psy11333 288 EVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVA 367 (482)
Q Consensus 288 ~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 367 (482)
+.+++.|+.. ..+..||..+.+....-.......-.+++..++..++.||.+ ..+..||..+.+.... -
T Consensus 210 ~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~sd~~~l~s~~~d-----~~v~vwd~~~~~~~~~-~ 278 (450)
T 2vdu_B 210 HQFIITSDRD-----EHIKISHYPQCFIVDKWLFGHKHFVSSICCGKDYLLLSAGGD-----DKIFAWDWKTGKNLST-F 278 (450)
T ss_dssp CEEEEEEETT-----SCEEEEEESCTTCEEEECCCCSSCEEEEEECSTTEEEEEESS-----SEEEEEETTTCCEEEE-E
T ss_pred CcEEEEEcCC-----CcEEEEECCCCceeeeeecCCCCceEEEEECCCCEEEEEeCC-----CeEEEEECCCCcEeee-e
Confidence 5566666642 357888877665422101011111112222277777788755 4789999988764322 0
Q ss_pred CC------------------------CCcccceeEEEE-CCEEEEEeccCCCcccCeEEEEeC--C-CCceeecCCCCCC
Q psy11333 368 PT------------------------TSCRTSVGVAVL-DGFLYAVGGQDGVQCLNHVERYDP--K-ENKWSRVAPMTTR 419 (482)
Q Consensus 368 ~~------------------------~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~--~-~~~W~~~~~~~~~ 419 (482)
.. .....-.+++.. +++.+++++... ..+..||. . ..++..+..++..
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d----~~i~iw~~~~~~~~~l~~~~~~~~~ 354 (450)
T 2vdu_B 279 DYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEAT----KCIIILEMSEKQKGDLALKQIITFP 354 (450)
T ss_dssp ECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTC----SEEEEEEECSSSTTCEEEEEEEECS
T ss_pred cchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCC----CeEEEEEeccCCCCceeeccEeccC
Confidence 10 000111122222 355455544211 45777887 3 3445555444333
Q ss_pred ccceEEEEECCEEEEEcCCCCC----CCCCeEEEEeCCCCcee
Q psy11333 420 RLGVAVAVLGGFLYAIGGSDGQ----SPLNTVERFDPKLNRWT 458 (482)
Q Consensus 420 r~~~~~~~~~~~i~v~GG~~~~----~~~~~~~~y~~~~~~W~ 458 (482)
.....++...+.+++..+.... ...-.++.++..+++|+
T Consensus 355 ~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 355 YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTEEE
T ss_pred CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCeEE
Confidence 3344555556777777665321 11225677777777775
No 175
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=90.72 E-value=7.9 Score=33.70 Aligned_cols=156 Identities=13% Similarity=0.013 Sum_probs=81.4
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCC-CCeeeccCCCCCCCceeEEE-ECCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQS-SDWKIVAPMSKRRCGVGVAV-LNDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~-~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
++..+++++. ..++.+|..+ .+...+........-.+++. -+++.+++++.... ....++.++..++..+.
T Consensus 52 dg~~l~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~l~~~~~~~~~~~~ 124 (297)
T 2ojh_A 52 DGKYLLLNSE------GLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEF-GKSAIYLLPSTGGTPRL 124 (297)
T ss_dssp TSSEEEEEET------TEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTT-SSCEEEEEETTCCCCEE
T ss_pred CCCEEEEEcC------CeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCC-CcceEEEEECCCCceEE
Confidence 4555555541 3789999998 77665543332121122222 36666666653321 24578999988877666
Q ss_pred cCCCCCCcccceeEEE-ECCE-EEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCE-EEEEcCCCC
Q psy11333 365 DVAPTTSCRTSVGVAV-LDGF-LYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGF-LYAIGGSDG 440 (482)
Q Consensus 365 ~~~~~~~~r~~~~~~~-~~~~-lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~-i~v~GG~~~ 440 (482)
+ ..... ...+.. -+++ +++.++.++. ..++.+|..+.....+...+.. ...+... +++ |++.++.++
T Consensus 125 ~-~~~~~---~~~~~~spdg~~l~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~~~~ 195 (297)
T 2ojh_A 125 M-TKNLP---SYWHGWSPDGKSFTYCGIRDQV---FDIYSMDIDSGVETRLTHGEGR--NDGPDYSPDGRWIYFNSSRTG 195 (297)
T ss_dssp C-CSSSS---EEEEEECTTSSEEEEEEEETTE---EEEEEEETTTCCEEECCCSSSC--EEEEEECTTSSEEEEEECTTS
T ss_pred e-ecCCC---ccceEECCCCCEEEEEECCCCc---eEEEEEECCCCcceEcccCCCc--cccceECCCCCEEEEEecCCC
Confidence 5 32221 122222 2444 5545554332 3677777877776655443221 1222222 554 554444333
Q ss_pred CCCCCeEEEEeCCCCceeecC
Q psy11333 441 QSPLNTVERFDPKLNRWTAMA 461 (482)
Q Consensus 441 ~~~~~~~~~y~~~~~~W~~~~ 461 (482)
...++.+++.......+.
T Consensus 196 ---~~~i~~~~~~~~~~~~~~ 213 (297)
T 2ojh_A 196 ---QMQIWRVRVDGSSVERIT 213 (297)
T ss_dssp ---SCEEEEEETTSSCEEECC
T ss_pred ---CccEEEECCCCCCcEEEe
Confidence 356788887666655553
No 176
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=90.66 E-value=2.4 Score=39.52 Aligned_cols=147 Identities=18% Similarity=0.138 Sum_probs=74.8
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccC----------C-CCCCCceeEEEE---CCEEEEEecCCCCCCCCeE
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAP----------M-SKRRCGVGVAVL---NDLLYAVGGHDGQSYLNSI 352 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~----------~-~~~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~ 352 (482)
++.+++.|+.. ..+..||..+........ . .........+.+ ++.+++.||.+ ..+
T Consensus 55 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-----~~i 124 (408)
T 4a11_B 55 EGRYMLSGGSD-----GVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD-----KTL 124 (408)
T ss_dssp TCCEEEEEETT-----SCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT-----SEE
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC-----CeE
Confidence 56666777643 357788887765422111 0 011112222222 45577777755 368
Q ss_pred EEEeCCCCceeecCCCCCCcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-C
Q psy11333 353 ERYDPQTNQWSCDVAPTTSCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-G 429 (482)
Q Consensus 353 ~~yd~~~~~W~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~ 429 (482)
..||..+.+-... ...+.+......... ++.+++.|+.++ .+..||+.+.+-...-.. ......++... +
T Consensus 125 ~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~d~~~~~~~~~~~~-~~~~v~~~~~~~~ 197 (408)
T 4a11_B 125 KVWDTNTLQTADV-FNFEETVYSHHMSPVSTKHCLVAVGTRGP-----KVQLCDLKSGSCSHILQG-HRQEILAVSWSPR 197 (408)
T ss_dssp EEEETTTTEEEEE-EECSSCEEEEEECSSCSSCCEEEEEESSS-----SEEEEESSSSCCCEEECC-CCSCEEEEEECSS
T ss_pred EEeeCCCCcccee-ccCCCceeeeEeecCCCCCcEEEEEcCCC-----eEEEEeCCCcceeeeecC-CCCcEEEEEECCC
Confidence 9999998875544 222222211111111 445777776543 578888876543221111 11112222222 3
Q ss_pred CE-EEEEcCCCCCCCCCeEEEEeCCCC
Q psy11333 430 GF-LYAIGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 430 ~~-i~v~GG~~~~~~~~~~~~y~~~~~ 455 (482)
+. +++.|+.++ .+.+||..+.
T Consensus 198 ~~~ll~~~~~dg-----~i~i~d~~~~ 219 (408)
T 4a11_B 198 YDYILATASADS-----RVKLWDVRRA 219 (408)
T ss_dssp CTTEEEEEETTS-----CEEEEETTCS
T ss_pred CCcEEEEEcCCC-----cEEEEECCCC
Confidence 33 788887654 5788887543
No 177
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=90.61 E-value=16 Score=37.33 Aligned_cols=148 Identities=11% Similarity=-0.032 Sum_probs=80.4
Q ss_pred CceeEEEeCCC------C--CeeeccCCCCCCCceeEEEECCEEEEEecCCCCCCCCeEEEEeCCCC---ceeecCCCCC
Q psy11333 302 ISSVERYDPQS------S--DWKIVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTN---QWSCDVAPTT 370 (482)
Q Consensus 302 ~~~~~~~d~~~------~--~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~---~W~~~~~~~~ 370 (482)
.+.++.+|..+ . .+..+..-.... ......-++.||+.+..+. ....++.+|..+. .|+.+.+...
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~ 334 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFKTNRHS--PNYRLINIDFTDPEESKWKVLVPEHE 334 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGGCEEEECCCS
T ss_pred ccEEEEEECcccccccCCccceEEeeCCCCcE-EEEEeccCCEEEEEECCCC--CCCEEEEEeCCCCCcccceeccCCCC
Confidence 46789999876 3 566654322211 1122234678888875432 2357999999876 5888723222
Q ss_pred CcccceeEEEE-CCEEEEEeccCCCcccCeEEEEeCCCCc-eeecCCCCCCccceEEEEE-CC-EEEEEc-CCCCCCCCC
Q psy11333 371 SCRTSVGVAVL-DGFLYAVGGQDGVQCLNHVERYDPKENK-WSRVAPMTTRRLGVAVAVL-GG-FLYAIG-GSDGQSPLN 445 (482)
Q Consensus 371 ~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~r~~~~~~~~-~~-~i~v~G-G~~~~~~~~ 445 (482)
. ..-.++... ++.+++....++ ...++.+|+.+.+ ...+. .+ .......... ++ .+++.. +.. .-.
T Consensus 335 ~-~~~~~~~~~~~~~lv~~~~~~g---~~~l~~~~~~~g~~~~~l~-~~-~~~v~~~~~s~d~~~l~~~~ss~~---~P~ 405 (710)
T 2xdw_A 335 K-DVLEWVACVRSNFLVLCYLHDV---KNTLQLHDLATGALLKIFP-LE-VGSVVGYSGQKKDTEIFYQFTSFL---SPG 405 (710)
T ss_dssp S-CEEEEEEEETTTEEEEEEEETT---EEEEEEEETTTCCEEEEEC-CC-SSEEEEEECCTTCSEEEEEEECSS---CCC
T ss_pred C-CeEEEEEEEcCCEEEEEEEECC---EEEEEEEECCCCCEEEecC-CC-CceEEEEecCCCCCEEEEEEeCCC---CCC
Confidence 1 122234445 778888776544 2468889985554 34443 22 1111111111 33 444442 222 225
Q ss_pred eEEEEeCCCCc--eeecC
Q psy11333 446 TVERFDPKLNR--WTAMA 461 (482)
Q Consensus 446 ~~~~y~~~~~~--W~~~~ 461 (482)
+++.||..+++ ++.+.
T Consensus 406 ~i~~~d~~tg~~~~~~l~ 423 (710)
T 2xdw_A 406 IIYHCDLTKEELEPRVFR 423 (710)
T ss_dssp EEEEEETTSSSCCCEEEE
T ss_pred EEEEEECCCCccceEEee
Confidence 79999998776 65543
No 178
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=90.58 E-value=11 Score=37.65 Aligned_cols=116 Identities=14% Similarity=0.272 Sum_probs=66.3
Q ss_pred CCCCCcEEEEeccccCCCCCceeEEEeCCCCC--eeeccCCCCC---C---CceeEEEECCEEEEEecCCCCCCCCeEEE
Q psy11333 283 PSRRGEVLFAVGGWCSGDAISSVERYDPQSSD--WKIVAPMSKR---R---CGVGVAVLNDLLYAVGGHDGQSYLNSIER 354 (482)
Q Consensus 283 ~~~~~~~l~~~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~---~---~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 354 (482)
.++.++.||+.+.. ..++.+|..+.+ |+.-...+.. . ...+.++.++.||+... ...++.
T Consensus 64 P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~------dg~l~A 131 (582)
T 1flg_A 64 AIVSDGVIYVTASY------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL------DASVVA 131 (582)
T ss_dssp CEEETTEEEEEETT------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET------TTEEEE
T ss_pred cEEECCEEEEEcCC------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC------CCEEEE
Confidence 34568899988652 238999998764 8764432211 1 12344567999988532 246999
Q ss_pred EeCCCCc--eeecCCCCCCccc--ceeEEEECC------EEEEEeccCC-CcccCeEEEEeCCCC--ceee
Q psy11333 355 YDPQTNQ--WSCDVAPTTSCRT--SVGVAVLDG------FLYAVGGQDG-VQCLNHVERYDPKEN--KWSR 412 (482)
Q Consensus 355 yd~~~~~--W~~~~~~~~~~r~--~~~~~~~~~------~lyv~GG~~~-~~~~~~~~~yd~~~~--~W~~ 412 (482)
+|..+.+ |+.- ...+...+ ..+-++.++ .+|+ |...+ ......+..||+.+. .|+.
T Consensus 132 lD~~TG~~~W~~~-~~~~~~~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 132 LNKNTGKVVWKKK-FADHGAGYTMTGAPTIVKDGKTGKVLLIH-GSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EESSSCCEEEEEE-CSCGGGTCBCCSCCEEEECTTTCCEEEEE-CCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred EECCCCCEEeeec-CCCCCcCcccccCCEEeCCCcCCcEEEEE-eccccccCCCCEEEEEECCCCCEEeec
Confidence 9998886 8854 22111111 112234455 6655 32211 112357899999866 4864
No 179
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=90.58 E-value=6.2 Score=39.85 Aligned_cols=146 Identities=15% Similarity=0.090 Sum_probs=81.2
Q ss_pred ceeEEEeCC-CCCeeeccCCCCC--CCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcc----c
Q psy11333 303 SSVERYDPQ-SSDWKIVAPMSKR--RCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCR----T 374 (482)
Q Consensus 303 ~~~~~~d~~-~~~W~~~~~~~~~--~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r----~ 374 (482)
..++.+|.. +.++.....+... ......+.. +|++|+.+..++ ...++.+|+.+++++.+ .+..... .
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~---~~~l~~~~~~~~~~~~l-~~~~~~~~~p~w 292 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTG---WWNLHRVDPATGAATQL-CRREEEFAGPLW 292 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTS---SCEEEEECTTTCCEEES-SCCSSBSSCCCC
T ss_pred cEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCC---CeEEEEEECCCCceeec-ccccccccCccc
Confidence 479999998 5633222221111 111222222 778887776543 24799999999999887 3322111 0
Q ss_pred ---ceeEEEE-CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEE-EEECCEEEEEcCCCCCCCCCeEEE
Q psy11333 375 ---SVGVAVL-DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAV-AVLGGFLYAIGGSDGQSPLNTVER 449 (482)
Q Consensus 375 ---~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~-~~~~~~i~v~GG~~~~~~~~~~~~ 449 (482)
....+.. ++++++.+.. + ...++.+|+.+.+...+.... .....+ ..-++.+++..+... ....++.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~-~---~~~l~~~d~~~~~~~~l~~~~--~~~~~~~s~~~~~~~~~~~~~~--~~~~i~~ 364 (662)
T 3azo_A 293 TPGMRWFAPLANGLIAVVHGK-G---AAVLGILDPESGELVDAAGPW--TEWAATLTVSGTRAVGVAASPR--TAYEVVE 364 (662)
T ss_dssp STTCCSEEECTTSCEEEEEBS-S---SCEEEEEETTTTEEEECCSSC--CEEEEEEEEETTEEEEEEEETT--EEEEEEE
T ss_pred cccCceEeEeCCCEEEEEEEc-C---ccEEEEEECCCCcEEEecCCC--CeEEEEEecCCCEEEEEEcCCC--CCCEEEE
Confidence 1123333 6788877764 3 357888898887776664321 111222 333566666554321 1246788
Q ss_pred EeCCCCceeec
Q psy11333 450 FDPKLNRWTAM 460 (482)
Q Consensus 450 y~~~~~~W~~~ 460 (482)
+|+.+.+...+
T Consensus 365 ~d~~~g~~~~l 375 (662)
T 3azo_A 365 LDTVTGRARTI 375 (662)
T ss_dssp EETTTCCEEEE
T ss_pred EECCCCceEEe
Confidence 88777776655
No 180
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=90.53 E-value=6.9 Score=34.73 Aligned_cols=135 Identities=18% Similarity=0.201 Sum_probs=69.9
Q ss_pred ceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEE
Q psy11333 303 SSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAV 380 (482)
Q Consensus 303 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~ 380 (482)
++|..+|..+.+....-.+........++.+ ++...+.|+.++ .+..||..+++-... ............
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg-----~v~iw~~~~~~~~~~---~~~h~~~~~~~~ 116 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA-----EVQLWDVQQQKRLRN---MTSHSARVGSLS 116 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEE---EECCSSCEEEEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCC-----cEEEeecCCceeEEE---ecCccceEEEee
Confidence 4689999999876554333322222222332 677888888663 789999998864332 111111223344
Q ss_pred ECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceE-EEEECCEEEEEcCCCCCCCCCeEEEEeCCCC
Q psy11333 381 LDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVA-VAVLGGFLYAIGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 381 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~-~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~ 455 (482)
.++.+.+.|+..+ .+..++..+................. ....++..++.|+.++ .+.+||..+.
T Consensus 117 ~~~~~l~s~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~ 182 (318)
T 4ggc_A 117 WNSYILSSGSRSG-----HIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN-----LVNVWPSAPG 182 (318)
T ss_dssp EETTEEEEEETTS-----EEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEESSCB
T ss_pred cCCCEEEEEecCC-----ceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCc-----ceeEEECCCC
Confidence 5666777776543 34445444333221111111111112 2222556666776653 5677776543
No 181
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=90.41 E-value=2 Score=38.82 Aligned_cols=114 Identities=19% Similarity=0.318 Sum_probs=60.1
Q ss_pred EEEEEecCCCCCCCCeEEEEeCCC-CceeecCCCCCCcccceeEEEE--C----CEEEEEeccCCCcccCeEEEEeCCC-
Q psy11333 336 LLYAVGGHDGQSYLNSIERYDPQT-NQWSCDVAPTTSCRTSVGVAVL--D----GFLYAVGGQDGVQCLNHVERYDPKE- 407 (482)
Q Consensus 336 ~iyv~GG~~~~~~~~~~~~yd~~~-~~W~~~~~~~~~~r~~~~~~~~--~----~~lyv~GG~~~~~~~~~~~~yd~~~- 407 (482)
..++.||.++ .+..||..+ ..|+.+ ..+.........+.+ + +.+++.|+.++ .+..||..+
T Consensus 180 ~~l~sgs~D~-----~v~lWd~~~~~~~~~~-~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~-----~v~iw~~~~~ 248 (316)
T 3bg1_A 180 KRFASGGCDN-----LIKLWKEEEDGQWKEE-QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDG-----RVFIWTCDDA 248 (316)
T ss_dssp CBEECCBTTS-----BCCEEEECTTSCEEEE-ECCBCCSSCEEEEECCCCSSCSCCEEEEEETTC-----EEEEEECSST
T ss_pred ceEEEecCCC-----eEEEEEeCCCCcccee-eecccCCCceEEEEecCCCCCCCceEEEEcCCC-----eEEEEEccCc
Confidence 4666676553 567788763 457655 333222222222222 2 26777877653 567777664
Q ss_pred --Cceee--cCCCCCCccceEEEE-ECCEEEEEcCCCCCCCCCeEEEEeCC-CCceeecCCCCcCC
Q psy11333 408 --NKWSR--VAPMTTRRLGVAVAV-LGGFLYAIGGSDGQSPLNTVERFDPK-LNRWTAMAPMSTRR 467 (482)
Q Consensus 408 --~~W~~--~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~y~~~-~~~W~~~~~~~~~r 467 (482)
..|.. +... .....+++. .++.+++.||.++ .+.+|+.. ...|..+..+..+-
T Consensus 249 ~~~~~~~~~~~~~--~~~v~~v~~sp~g~~las~~~D~-----~v~lw~~~~~g~~~~~~~~~~~~ 307 (316)
T 3bg1_A 249 SSNTWSPKLLHKF--NDVVWHVSWSITANILAVSGGDN-----KVTLWKESVDGQWVCISDVNKGQ 307 (316)
T ss_dssp TCCCCBCCEEEEC--SSCEEEEEECTTTCCEEEEESSS-----CEEEEEECTTSCEEEEEECC---
T ss_pred cccchhhhhhhcC--CCcEEEEEEcCCCCEEEEEcCCC-----eEEEEEECCCCcEEEeeeccCCC
Confidence 33421 1111 111222222 2677788887653 57778764 56899887776544
No 182
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=90.40 E-value=5.9 Score=37.96 Aligned_cols=142 Identities=18% Similarity=0.163 Sum_probs=75.3
Q ss_pred CCCcEEEEeccccCCCCCceeEEEeCCCCCeee--c----cCCCCCCCceeEEE---ECCEEEEEecCCCCCCCCeEEEE
Q psy11333 285 RRGEVLFAVGGWCSGDAISSVERYDPQSSDWKI--V----APMSKRRCGVGVAV---LNDLLYAVGGHDGQSYLNSIERY 355 (482)
Q Consensus 285 ~~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~--~----~~~~~~~~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~y 355 (482)
...+++|+|-| +.+|+++.....+.. + +.+|. ..-++. .++++|++-| +..|+|
T Consensus 270 ~~~ge~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~Wp~LP~---~iDAa~~~~~~g~~~fFKg-------~~~W~~ 332 (450)
T 1su3_A 270 TIRGEVMFFKD-------RFYMRTNPFYPEVELNFISVFWPQLPN---GLEAAYEFADRDEVRFFKG-------NKYWAV 332 (450)
T ss_dssp EETTEEEEEET-------TEEEECCTTSSSCEEEEGGGTCTTSCS---SCCEEEEEGGGTEEEEEET-------TEEEEE
T ss_pred ecCCeEEEEeC-------CEEEEEcCCCCcccceehhHhccCCCC---CeeEEEEEcCCCeEEEEeC-------CEEEEe
Confidence 35788999877 345666655433321 1 12332 223333 2789999987 457787
Q ss_pred eCCCCc--e-eecC--CCCCCcccce-eEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCceee-----cC-CC-CCCc
Q psy11333 356 DPQTNQ--W-SCDV--APTTSCRTSV-GVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWSR-----VA-PM-TTRR 420 (482)
Q Consensus 356 d~~~~~--W-~~~~--~~~~~~r~~~-~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~-----~~-~~-~~~r 420 (482)
+..+.. + +.+. -..|...... ++... ++++|++-| +..|+||..+.+-.. +. .. ..|.
T Consensus 333 ~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG-------~~yw~yd~~~~~~~~gYPk~I~~~fpgip~ 405 (450)
T 1su3_A 333 QGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA-------NKYWRYDEYKRSMDPGYPKMIAHDFPGIGH 405 (450)
T ss_dssp ETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCSEEHHHHSTTSCS
T ss_pred cCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC-------CEEEEEeCCCccccCCCCcchhhcCCCCCC
Confidence 753211 0 0010 0111111112 22233 589999976 468889876543221 11 01 1222
Q ss_pred cceEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCCce
Q psy11333 421 LGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLNRW 457 (482)
Q Consensus 421 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~~W 457 (482)
.--++...++++|++-| +..|+||..+.+=
T Consensus 406 ~iDAA~~~~g~~YFFkg-------~~ywr~d~~~~~v 435 (450)
T 1su3_A 406 KVDAVFMKDGFFYFFHG-------TRQYKFDPKTKRI 435 (450)
T ss_dssp CCSEEEEETTEEEEEET-------TEEEEEETTTTEE
T ss_pred CccEEEEcCCeEEEEeC-------CEEEEEECCcceE
Confidence 23344456899999988 4678998876653
No 183
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=90.38 E-value=9.3 Score=36.02 Aligned_cols=149 Identities=11% Similarity=0.070 Sum_probs=78.0
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
++.+++.|+.. ..+..+|..+.+-...-..+........+.+ ++...+.|+.++ .+..||..+.+...
T Consensus 181 ~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg-----~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 181 EKSLLVALTNL-----SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRG-----IIDIWDIRFNVLIR 250 (437)
T ss_dssp SCEEEEEEETT-----SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTS-----CEEEEETTTTEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCC-----eEEEEEcCCccEEE
Confidence 35666666532 4688899988764322111101112222223 677788887663 68999998876533
Q ss_pred cCCCCCCcccceeEEE-----ECCEEEEEeccCCCcccCeEEEEeCCCCceeec-C-C---------CC-----------
Q psy11333 365 DVAPTTSCRTSVGVAV-----LDGFLYAVGGQDGVQCLNHVERYDPKENKWSRV-A-P---------MT----------- 417 (482)
Q Consensus 365 ~~~~~~~~r~~~~~~~-----~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~-~---------~~----------- 417 (482)
. -..+....-.+++. -++.+++.|+.++ .+..||..+.+-... . . .|
T Consensus 251 ~-~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 324 (437)
T 3gre_A 251 S-WSFGDHAPITHVEVCQFYGKNSVIVVGGSSKT-----FLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFC 324 (437)
T ss_dssp E-EBCTTCEEEEEEEECTTTCTTEEEEEEESTTE-----EEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCC
T ss_pred E-EecCCCCceEEEEeccccCCCccEEEEEcCCC-----cEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceec
Confidence 2 11111111111211 1355666666432 577788775542211 0 0 00
Q ss_pred ---CCccceEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 418 ---TRRLGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 418 ---~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
......+++..++.+++.||.+ ..+.+||..+.+
T Consensus 325 ~~~~~~~v~~l~~~~~~~l~s~~~d-----~~i~~wd~~~~~ 361 (437)
T 3gre_A 325 GIRSLNALSTISVSNDKILLTDEAT-----SSIVMFSLNELS 361 (437)
T ss_dssp CCCSGGGGCCEEEETTEEEEEEGGG-----TEEEEEETTCGG
T ss_pred ccccCCceEEEEECCceEEEecCCC-----CeEEEEECCCcc
Confidence 1112233444488888888876 368888877554
No 184
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=90.37 E-value=0.19 Score=39.54 Aligned_cols=82 Identities=15% Similarity=0.180 Sum_probs=57.3
Q ss_pred eEEEEeCCeEEeceeEEeeccCHHHHHHhcCC----CCcCccceEEEccCCHHHHHHHHHHhhcCeeeeccc-cHhhHHH
Q psy11333 39 DVVLNVGARKIFAHRVVLSACSPYFRAMFTGE----LAESRQAEVTIRDIDDVAMDNLIEFCYTSHITVEES-NVQTLLP 113 (482)
Q Consensus 39 Dv~i~~~~~~~~~hk~iL~~~S~~F~~~~~~~----~~e~~~~~i~l~~~~~~~~~~~l~~~y~~~~~~~~~-~~~~ll~ 113 (482)
-|+|.|+|..|...+..|..... .++... ......+.+- -|=++..|..||+|+.+|.+.++.+ ....+++
T Consensus 36 ~V~LNVGG~~F~T~~~TL~~~P~---S~L~~~~~~~~~~~~~g~yF-iDRdp~~F~~ILnflR~G~l~~p~~~~~~~l~e 111 (140)
T 2nz0_B 36 LIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYF-FDRDPEVFRCVLNFYRTGKLHYPRYECISAYDD 111 (140)
T ss_dssp EEEEEETTEEEEEEHHHHHTCTT---STTTSGGGGGSEETTTTEEE-ECSCHHHHHHHHHHHHHSSBCCCTTSCHHHHHH
T ss_pred EEEEEECCEEEEeeHHHHhcCCC---eeecccCCcccccCCCCeEE-EeCCcHHHHHHHHHHhcCCcCCCCCcCHHHHHH
Confidence 47889999999998888865432 233221 0111223344 4669999999999999998766544 3567888
Q ss_pred HhcccChhhHH
Q psy11333 114 AACLLQLVEIQ 124 (482)
Q Consensus 114 ~a~~~~~~~L~ 124 (482)
-|++|+++.+.
T Consensus 112 Ea~fy~i~~l~ 122 (140)
T 2nz0_B 112 ELAFYGILPEI 122 (140)
T ss_dssp HHHHHTCCGGG
T ss_pred HHHHcCCChHH
Confidence 89999998873
No 185
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=90.37 E-value=5.4 Score=35.98 Aligned_cols=143 Identities=13% Similarity=0.127 Sum_probs=70.8
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
++..++.|+.+ ..+..+|..+.+-.. .+.........+.+ ++.+.+.|+.++ .+..||.....-..
T Consensus 76 dg~~l~s~s~D-----~~v~~wd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~s~D~-----~i~vwd~~~~~~~~ 143 (319)
T 3frx_A 76 DGAYALSASWD-----KTLRLWDVATGETYQ--RFVGHKSDVMSVDIDKKASMIISGSRDK-----TIKVWTIKGQCLAT 143 (319)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEE--EEECCSSCEEEEEECTTSCEEEEEETTS-----CEEEEETTSCEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCCeeE--EEccCCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCeEEE
Confidence 45555666532 467888988775321 11111111122222 567777887663 68889987654433
Q ss_pred cCCCCCCcccceeEEEE-------CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCEEEEEc
Q psy11333 365 DVAPTTSCRTSVGVAVL-------DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGFLYAIG 436 (482)
Q Consensus 365 ~~~~~~~~r~~~~~~~~-------~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~G 436 (482)
+ ....... .++... ++..++.||.++ .+..||..+.+-...-. .......+++.. ++++++.|
T Consensus 144 ~-~~h~~~v--~~~~~~~~~~~~~~~~~l~s~~~d~-----~i~~wd~~~~~~~~~~~-~h~~~v~~~~~sp~g~~l~s~ 214 (319)
T 3frx_A 144 L-LGHNDWV--SQVRVVPNEKADDDSVTIISAGNDK-----MVKAWNLNQFQIEADFI-GHNSNINTLTASPDGTLIASA 214 (319)
T ss_dssp E-CCCSSCE--EEEEECCC------CCEEEEEETTS-----CEEEEETTTTEEEEEEC-CCCSCEEEEEECTTSSEEEEE
T ss_pred E-eccCCcE--EEEEEccCCCCCCCccEEEEEeCCC-----EEEEEECCcchhheeec-CCCCcEEEEEEcCCCCEEEEE
Confidence 3 1111111 111111 344666776543 57788887654322111 111111222222 67777888
Q ss_pred CCCCCCCCCeEEEEeCCCC
Q psy11333 437 GSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 437 G~~~~~~~~~~~~y~~~~~ 455 (482)
|.++ .+.+||..+.
T Consensus 215 ~~dg-----~i~iwd~~~~ 228 (319)
T 3frx_A 215 GKDG-----EIMLWNLAAK 228 (319)
T ss_dssp ETTC-----EEEEEETTTT
T ss_pred eCCC-----eEEEEECCCC
Confidence 7653 5667776544
No 186
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=90.36 E-value=11 Score=35.08 Aligned_cols=145 Identities=10% Similarity=0.055 Sum_probs=78.2
Q ss_pred CCCcEEEEeccccCCCCCceeEEEeCCCCCe--eec----cCCCCCCCceeEEE-ECCEEEEEecCCCCCCCCeEEEEeC
Q psy11333 285 RRGEVLFAVGGWCSGDAISSVERYDPQSSDW--KIV----APMSKRRCGVGVAV-LNDLLYAVGGHDGQSYLNSIERYDP 357 (482)
Q Consensus 285 ~~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W--~~~----~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~ 357 (482)
...+++|++-| +.+|+++.....- ..+ +.+|. ...++... .++++|++-| +..++|+.
T Consensus 188 ~~~g~~~fFkg-------~~~Wr~~~~~~~~~p~~I~~~wpgLP~-~iDAa~~~~~~g~~~fFkg-------~~yWr~~~ 252 (365)
T 3ba0_A 188 TVGNKIFFFKD-------RFFWLKVSERPKTSVNLISSLWPTLPS-GIEAAYEIEARNQVFLFKD-------DKYWLISN 252 (365)
T ss_dssp EETTEEEEEET-------TEEEECCSSCCCCCEEEHHHHCSSCCS-SCCEEEEEGGGTEEEEEET-------TEEEECST
T ss_pred EcCCeEEEEeC-------CEEEEEcCCCccCCccchhhhccCCCC-CccEEEEecCCCEEEEEeC-------CEEEEEcC
Confidence 35788998876 3566666544321 111 22332 22222222 2789999987 45777775
Q ss_pred CCCc--ee-ecCCC--CCCcccce-eEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCceee-----cCC--CCCCccc
Q psy11333 358 QTNQ--WS-CDVAP--TTSCRTSV-GVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWSR-----VAP--MTTRRLG 422 (482)
Q Consensus 358 ~~~~--W~-~~~~~--~~~~r~~~-~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~-----~~~--~~~~r~~ 422 (482)
.... +- .+ .. +|..-... ++... ++++|.+-| +..|+||..+.+-.. +.. +..|...
T Consensus 253 ~~~~~gyPk~I-~~~GlP~~~~~IDAA~~~~~~~~~yfFkG-------~~yw~yd~~~~~v~~gyPk~I~~~f~g~p~~i 324 (365)
T 3ba0_A 253 LRPEPNYPKSI-HSFGFPNFVKKIDAAVFNPRFYRTYFFVD-------NQYWRYDERRQMMDPGYPKLITKNFQGIGPKI 324 (365)
T ss_dssp TSCTTTCSEET-TTTTCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCCCHHHHSTTCCSSC
T ss_pred CcccCCCCcee-eeccCCCCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCCcceecCCCCcchhhcCCCCCCcc
Confidence 4322 11 22 11 22211122 33333 589999976 468889876554221 000 1122233
Q ss_pred eEEEEE-CCEEEEEcCCCCCCCCCeEEEEeCCCCceee
Q psy11333 423 VAVAVL-GGFLYAIGGSDGQSPLNTVERFDPKLNRWTA 459 (482)
Q Consensus 423 ~~~~~~-~~~i~v~GG~~~~~~~~~~~~y~~~~~~W~~ 459 (482)
-++... ++++|++-| +..++||..+.+-..
T Consensus 325 DaA~~~~~g~~YfFkg-------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 325 DAVFYSKNKYYYFFQG-------SNQFEYDFLLQRITK 355 (365)
T ss_dssp SEEEEETTTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred ceeeEecCCcEEEEeC-------CEEEEEECCccEEec
Confidence 444445 899999988 468999988766443
No 187
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=90.32 E-value=10 Score=34.47 Aligned_cols=71 Identities=17% Similarity=0.024 Sum_probs=39.5
Q ss_pred CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEECCEEEEEcCCCCCCCCCeEEEEeCCC--Cceee
Q psy11333 382 DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPKL--NRWTA 459 (482)
Q Consensus 382 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~--~~W~~ 459 (482)
++..++.|+.+ ..+..||..+.+-...-.............-++.+++.| .+ +.+.+||..+ ++|..
T Consensus 213 ~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d-----~~i~i~~~~~~~~~~~~ 281 (372)
T 1k8k_C 213 NGSRVAWVSHD-----STVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HD-----CFPVLFTYDSAAGKLSF 281 (372)
T ss_dssp SSSEEEEEETT-----TEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TT-----SSCEEEEEETTTTEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eC-----CeEEEEEccCcCceEEE
Confidence 56677777754 357888887655322211111111122223377766666 43 3567777777 88877
Q ss_pred cCCC
Q psy11333 460 MAPM 463 (482)
Q Consensus 460 ~~~~ 463 (482)
+..+
T Consensus 282 ~~~~ 285 (372)
T 1k8k_C 282 GGRL 285 (372)
T ss_dssp CCCC
T ss_pred eecc
Confidence 7544
No 188
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=90.29 E-value=3.4 Score=37.31 Aligned_cols=144 Identities=13% Similarity=0.128 Sum_probs=71.8
Q ss_pred cEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceeecC
Q psy11333 288 EVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDV 366 (482)
Q Consensus 288 ~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 366 (482)
+.+++.|+.. ..+..+|..+.+....-.. ....-.+++.. ++.+++.||.++ .+..||..+.+-...
T Consensus 185 ~~~~~s~~~d-----~~i~i~d~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~s~Dg-----~i~iwd~~~~~~~~~- 252 (340)
T 4aow_A 185 NPIIVSCGWD-----KLVKVWNLANCKLKTNHIG-HTGYLNTVTVSPDGSLCASGGKDG-----QAMLWDLNEGKHLYT- 252 (340)
T ss_dssp SCEEEEEETT-----SCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTC-----EEEEEETTTTEEEEE-
T ss_pred CcEEEEEcCC-----CEEEEEECCCCceeeEecC-CCCcEEEEEECCCCCEEEEEeCCC-----eEEEEEeccCceeee-
Confidence 3455555532 3577888887664322111 11111122222 677888888663 688999887653322
Q ss_pred CCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceee-cCC-C------CCCccceEEEEE-CCEEEEEcC
Q psy11333 367 APTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSR-VAP-M------TTRRLGVAVAVL-GGFLYAIGG 437 (482)
Q Consensus 367 ~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~-~------~~~r~~~~~~~~-~~~i~v~GG 437 (482)
+.....-.++....+..++.||.+ ..+..||..+..-.. +.. . ..+....+++.. +++.++.||
T Consensus 253 --~~~~~~v~~~~~~~~~~~~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs 325 (340)
T 4aow_A 253 --LDGGDIINALCFSPNRYWLCAATG-----PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY 325 (340)
T ss_dssp --EECSSCEEEEEECSSSSEEEEEET-----TEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEE
T ss_pred --ecCCceEEeeecCCCCceeeccCC-----CEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEe
Confidence 111111123333334445555543 357778877654322 111 0 111111222222 677888888
Q ss_pred CCCCCCCCeEEEEeCCCC
Q psy11333 438 SDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 438 ~~~~~~~~~~~~y~~~~~ 455 (482)
.++ .|.+||.+++
T Consensus 326 ~Dg-----~v~iW~~~tG 338 (340)
T 4aow_A 326 TDN-----LVRVWQVTIG 338 (340)
T ss_dssp TTS-----CEEEEEEEC-
T ss_pred CCC-----EEEEEeCCCc
Confidence 764 5888887764
No 189
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=90.23 E-value=1.5 Score=40.06 Aligned_cols=146 Identities=23% Similarity=0.329 Sum_probs=73.7
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE--C--CEEEEEecCCCCCCCCeEEEEeCCCC--
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--N--DLLYAVGGHDGQSYLNSIERYDPQTN-- 360 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~~~~-- 360 (482)
++.+++.|+.+ ..+..+|..+..|..+..+.........+.+ + +...+.||.++ ++..||..+.
T Consensus 164 ~~~~l~s~s~D-----~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~-----~v~iw~~~~~~~ 233 (330)
T 2hes_X 164 SEALLASSSYD-----DTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS-----TVRVWKYMGDDE 233 (330)
T ss_dssp SSSEEEEEETT-----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS-----CEEEEEEEEECT
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC-----eEEEEEecCCCc
Confidence 45566666643 3466777777766654443322222222222 2 34566677553 5677776432
Q ss_pred ----ceeecCCCCCC--cccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCC--CCCc-cceEEEEE---
Q psy11333 361 ----QWSCDVAPTTS--CRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPM--TTRR-LGVAVAVL--- 428 (482)
Q Consensus 361 ----~W~~~~~~~~~--~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~--~~~r-~~~~~~~~--- 428 (482)
.|... ..++. ...-.+++...+.+++.||.++ .+..||..+..|..+... .... ...+++..
T Consensus 234 ~~~~~~~~~-~~~~~~h~~~v~~v~~s~~~~l~s~~~dg-----~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~ 307 (330)
T 2hes_X 234 DDQQEWVCE-AILPDVHKRQVYNVAWGFNGLIASVGADG-----VLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELN 307 (330)
T ss_dssp TSCEEEEEE-EECCSCCSSCEEEEEECTTSCEEEEETTS-----CEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC---
T ss_pred cccceeEEe-eecccccccceEEEEEcCCCEEEEEeCCC-----EEEEEEcCCCceEEEeccccccccceEEEEEEecCC
Confidence 35443 22221 1122233333455677777543 577788888888654322 1111 11222221
Q ss_pred CCEEEEEcCCCCCCCCCeEEEEeCC
Q psy11333 429 GGFLYAIGGSDGQSPLNTVERFDPK 453 (482)
Q Consensus 429 ~~~i~v~GG~~~~~~~~~~~~y~~~ 453 (482)
++.+++.||.++ .+..||.+
T Consensus 308 ~~~~las~s~Dg-----~v~~W~~~ 327 (330)
T 2hes_X 308 GKTILATGGDDG-----IVNFWSLE 327 (330)
T ss_dssp --CCEEEEETTS-----EEEEEEC-
T ss_pred CceEEEEecCCC-----cEEEEEec
Confidence 467888888763 67888765
No 190
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=90.23 E-value=3.8 Score=42.58 Aligned_cols=145 Identities=15% Similarity=0.088 Sum_probs=75.4
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEE-ECCEEEEEecCCCCCCCCeEEEEeCCCCceeec
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAV-LNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCD 365 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 365 (482)
++..+++|+.. ..+..||..+.+....-...... -.+++. -++...++||.+ ..+.+||..+++....
T Consensus 24 ~~~~la~~~~~-----g~v~iwd~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~ 92 (814)
T 3mkq_A 24 TEPWVLTTLYS-----GRVEIWNYETQVEVRSIQVTETP-VRAGKFIARKNWIIVGSDD-----FRIRVFNYNTGEKVVD 92 (814)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSC-EEEEEEEGGGTEEEEEETT-----SEEEEEETTTCCEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCceEEEEecCCCc-EEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEE
Confidence 45555666532 36888898877643221111111 122222 266677777754 4789999988876433
Q ss_pred CCCCCCcccceeEEE-ECCEEEEEeccCCCcccCeEEEEeCCCC-ceeecCCCCCCccceEEEEE--CCEEEEEcCCCCC
Q psy11333 366 VAPTTSCRTSVGVAV-LDGFLYAVGGQDGVQCLNHVERYDPKEN-KWSRVAPMTTRRLGVAVAVL--GGFLYAIGGSDGQ 441 (482)
Q Consensus 366 ~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~ 441 (482)
......+ -.+++. -++..+++|+.+ ..+..||..++ .....-. .......+++.. ++..++.|+.+
T Consensus 93 ~~~~~~~--v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~d-- 162 (814)
T 3mkq_A 93 FEAHPDY--IRSIAVHPTKPYVLSGSDD-----LTVKLWNWENNWALEQTFE-GHEHFVMCVAFNPKDPSTFASGCLD-- 162 (814)
T ss_dssp EECCSSC--EEEEEECSSSSEEEEEETT-----SEEEEEEGGGTSEEEEEEE-CCSSCEEEEEEETTEEEEEEEEETT--
T ss_pred EecCCCC--EEEEEEeCCCCEEEEEcCC-----CEEEEEECCCCceEEEEEc-CCCCcEEEEEEEcCCCCEEEEEeCC--
Confidence 0111111 112222 256666777653 35778888765 2222111 111122233333 45677777765
Q ss_pred CCCCeEEEEeCCCC
Q psy11333 442 SPLNTVERFDPKLN 455 (482)
Q Consensus 442 ~~~~~~~~y~~~~~ 455 (482)
..+.+||..+.
T Consensus 163 ---g~v~vwd~~~~ 173 (814)
T 3mkq_A 163 ---RTVKVWSLGQS 173 (814)
T ss_dssp ---SEEEEEETTCS
T ss_pred ---CeEEEEECCCC
Confidence 36888887644
No 191
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=90.19 E-value=3.6 Score=38.47 Aligned_cols=142 Identities=14% Similarity=0.050 Sum_probs=72.1
Q ss_pred EEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCC
Q psy11333 290 LFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAP 368 (482)
Q Consensus 290 l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~ 368 (482)
.++.|+.. ..+..||..+.+-...-.. ....-.+++.. ++..++.|+.+ ..+..||..+.+.......
T Consensus 219 ~~~~~~~~-----g~i~~~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~ 287 (425)
T 1r5m_A 219 KFVIPGPK-----GAIFVYQITEKTPTGKLIG-HHGPISVLEFNDTNKLLLSASDD-----GTLRIWHGGNGNSQNCFYG 287 (425)
T ss_dssp EEEEECGG-----GCEEEEETTCSSCSEEECC-CSSCEEEEEEETTTTEEEEEETT-----SCEEEECSSSBSCSEEECC
T ss_pred EEEEEcCC-----CeEEEEEcCCCceeeeecc-CCCceEEEEECCCCCEEEEEcCC-----CEEEEEECCCCccceEecC
Confidence 35555532 3688899887643211111 11111223333 66677777754 3588999887654322011
Q ss_pred CCCcccceeEEEE-CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCEEEEEcCCCCCCCCCe
Q psy11333 369 TTSCRTSVGVAVL-DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGFLYAIGGSDGQSPLNT 446 (482)
Q Consensus 369 ~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~ 446 (482)
.. ..-.++... ++ .++.|+.+ ..+..||..+.+-...-.... .....++.. ++.+++.|+.++ .
T Consensus 288 ~~--~~i~~~~~~~~~-~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~-~~i~~~~~s~~~~~l~~~~~dg-----~ 353 (425)
T 1r5m_A 288 HS--QSIVSASWVGDD-KVISCSMD-----GSVRLWSLKQNTLLALSIVDG-VPIFAGRISQDGQKYAVAFMDG-----Q 353 (425)
T ss_dssp CS--SCEEEEEEETTT-EEEEEETT-----SEEEEEETTTTEEEEEEECTT-CCEEEEEECTTSSEEEEEETTS-----C
T ss_pred CC--ccEEEEEECCCC-EEEEEeCC-----CcEEEEECCCCcEeEecccCC-ccEEEEEEcCCCCEEEEEECCC-----e
Confidence 11 112233333 45 66676654 368889987665332222111 111222222 667778877653 5
Q ss_pred EEEEeCCCCc
Q psy11333 447 VERFDPKLNR 456 (482)
Q Consensus 447 ~~~y~~~~~~ 456 (482)
+.+||..+.+
T Consensus 354 i~i~~~~~~~ 363 (425)
T 1r5m_A 354 VNVYDLKKLN 363 (425)
T ss_dssp EEEEECHHHH
T ss_pred EEEEECCCCc
Confidence 7788776443
No 192
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=90.16 E-value=2.9 Score=38.15 Aligned_cols=149 Identities=13% Similarity=0.065 Sum_probs=74.2
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCC-CeeeccCCCCCCCce-eEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCcee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSS-DWKIVAPMSKRRCGV-GVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWS 363 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~-~W~~~~~~~~~~~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 363 (482)
++..++.|+.. ..+..||..+. .-.. .+....... +++.. ++..++.|+.+ ..+..||..+.+..
T Consensus 186 ~~~~l~~~~~d-----g~i~i~d~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~ 253 (369)
T 3zwl_B 186 KGKYIIAGHKD-----GKISKYDVSNNYEYVD--SIDLHEKSISDMQFSPDLTYFITSSRD-----TNSFLVDVSTLQVL 253 (369)
T ss_dssp GGCEEEEEETT-----SEEEEEETTTTTEEEE--EEECCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEE
T ss_pred CCCEEEEEcCC-----CEEEEEECCCCcEeEE--EEecCCCceeEEEECCCCCEEEEecCC-----ceEEEEECCCCcee
Confidence 45555666532 36888998873 3211 111111122 22222 66677777654 36899999887654
Q ss_pred ecCCCCCCcccceeEEEECCEEEEEeccCCCc---------ccCeEEEEeCCCCceeecCCCCCCccceEEEEE--CCEE
Q psy11333 364 CDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQ---------CLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL--GGFL 432 (482)
Q Consensus 364 ~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~---------~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i 432 (482)
.. -....+. ......-+++.+++|+.++.. ....+..||..+.+-...- .........+.+ ++++
T Consensus 254 ~~-~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~--~~~~~~v~~~~~s~~~~~ 329 (369)
T 3zwl_B 254 KK-YETDCPL-NTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRV--QGHFGPLNTVAISPQGTS 329 (369)
T ss_dssp EE-EECSSCE-EEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEE--ECCSSCEEEEEECTTSSE
T ss_pred ee-ecCCCCc-eeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhe--ecccCcEEEEEECCCCCE
Confidence 33 1111111 112222356666666543211 1125778887765432211 111111222222 6788
Q ss_pred EEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 433 YAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 433 ~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
++.||.++ .+.+|+.++..
T Consensus 330 l~s~~~dg-----~v~iw~~~~~~ 348 (369)
T 3zwl_B 330 YASGGEDG-----FIRLHHFEKSY 348 (369)
T ss_dssp EEEEETTS-----EEEEEEECHHH
T ss_pred EEEEcCCC-----eEEEEECcccc
Confidence 88888763 68888876543
No 193
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=90.15 E-value=6.3 Score=35.19 Aligned_cols=106 Identities=12% Similarity=0.059 Sum_probs=55.2
Q ss_pred CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEE---CCEEEEEeccCCCcccCeEEEEeCCCCce
Q psy11333 334 NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVL---DGFLYAVGGQDGVQCLNHVERYDPKENKW 410 (482)
Q Consensus 334 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~yd~~~~~W 410 (482)
++.+++.||.++ ++..||..+..-... ......+.-..+... ++.+++.|+.+ ..+..||..+.+-
T Consensus 152 ~~~~l~sgs~D~-----~v~iwd~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~l~s~s~D-----~~i~iWd~~~~~~ 220 (304)
T 2ynn_A 152 DPSTFASGCLDR-----TVKVWSLGQSTPNFT-LTTGQERGVNYVDYYPLPDKPYMITASDD-----LTIKIWDYQTKSC 220 (304)
T ss_dssp CTTEEEEEETTS-----EEEEEETTCSSCSEE-EECCCTTCEEEEEECCSTTCCEEEEEETT-----SEEEEEETTTTEE
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCCccce-eccCCcCcEEEEEEEEcCCCCEEEEEcCC-----CeEEEEeCCCCcc
Confidence 456788888663 688999865432111 000111111111211 45677777754 3588899877643
Q ss_pred eecCCCCCCccceEEEEE-CCEEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 411 SRVAPMTTRRLGVAVAVL-GGFLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 411 ~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
...-.-.. .....++.. ++.+++.|+.++ .+.+||..+.+
T Consensus 221 ~~~~~~h~-~~v~~~~~~p~~~~l~s~s~Dg-----~i~iWd~~~~~ 261 (304)
T 2ynn_A 221 VATLEGHM-SNVSFAVFHPTLPIIISGSEDG-----TLKIWNSSTYK 261 (304)
T ss_dssp EEEEECCS-SCEEEEEECSSSSEEEEEETTS-----CEEEEETTTCC
T ss_pred ceeeCCCC-CCEEEEEECCCCCEEEEEcCCC-----eEEEEECCCCc
Confidence 22111111 111122222 567788887764 58888877654
No 194
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=90.11 E-value=11 Score=34.29 Aligned_cols=148 Identities=9% Similarity=-0.040 Sum_probs=74.4
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCCeee-c--cCCCCCCCc--eeEEEECCEEEEEecCCCCCCCCeEEEEeCCCC
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSDWKI-V--APMSKRRCG--VGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTN 360 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~-~--~~~~~~~~~--~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 360 (482)
.++.+++.||.+ ..+..+|..+.+-.. + +....-... ..++..++.|.++.. ...+..||..+.
T Consensus 46 ~d~~~l~sg~~D-----g~v~iwd~~~~~~~~~~~~~~v~~~~~~~~~~s~s~D~~i~~w~~------~~~~~~~~~~~~ 114 (343)
T 3lrv_A 46 YDKWVCMCRCED-----GALHFTQLKDSKTITTITTPNPRTGGEHPAIISRGPCNRLLLLYP------GNQITILDSKTN 114 (343)
T ss_dssp EEEEEEEEEEET-----TEEEEEEESSSSCEEEEEEECCCTTCCCCSEEEECSTTEEEEEET------TTEEEEEETTTC
T ss_pred CCCCEEEEECCC-----CcEEEEECCCCcEEEEEecCCceeeeeCCceEEecCCCeEEEEEc------cCceEEeecCCc
Confidence 467788888754 357777776654311 1 111110111 111122444444432 124566777666
Q ss_pred c-eeecCCCCCCcccceeEEE-E--CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCEEEEE
Q psy11333 361 Q-WSCDVAPTTSCRTSVGVAV-L--DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGFLYAI 435 (482)
Q Consensus 361 ~-W~~~~~~~~~~r~~~~~~~-~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~ 435 (482)
+ -... . .+....-.++.. - ++..++.|+.++ .+..||..+.+-.............+++.. ++.+++.
T Consensus 115 ~~~~~~-~-~~~~~~v~~~~~~~~~~~~~l~s~s~dg-----~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~las 187 (343)
T 3lrv_A 115 KVLREI-E-VDSANEIIYMYGHNEVNTEYFIWADNRG-----TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLAL 187 (343)
T ss_dssp CEEEEE-E-CCCSSCEEEEECCC---CCEEEEEETTC-----CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEE
T ss_pred ceeEEe-e-cCCCCCEEEEEcCCCCCCCEEEEEeCCC-----cEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEE
Confidence 5 2222 1 111111112221 1 567788887643 578899887766444333322222333333 7788888
Q ss_pred cCCCCCCCCCeEEEEeCCCCc
Q psy11333 436 GGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 436 GG~~~~~~~~~~~~y~~~~~~ 456 (482)
|+.++ .+.+||..+.+
T Consensus 188 g~~dg-----~i~iwd~~~~~ 203 (343)
T 3lrv_A 188 YSPDG-----ILDVYNLSSPD 203 (343)
T ss_dssp ECTTS-----CEEEEESSCTT
T ss_pred EcCCC-----EEEEEECCCCC
Confidence 88764 68888887654
No 195
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=90.09 E-value=0.029 Score=51.51 Aligned_cols=77 Identities=14% Similarity=0.230 Sum_probs=52.2
Q ss_pred CHHHHHHhcCCCCcCccceEEE-ccCCHHHHHHHHHHhhcCee-eeccccHhhHHHHhcccChhhHHHHHHHHHhccCC
Q psy11333 60 SPYFRAMFTGELAESRQAEVTI-RDIDDVAMDNLIEFCYTSHI-TVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLD 136 (482)
Q Consensus 60 S~~F~~~~~~~~~e~~~~~i~l-~~~~~~~~~~~l~~~y~~~~-~~~~~~~~~ll~~a~~~~~~~L~~~~~~~i~~~~~ 136 (482)
..+++.+|++.......+...+ ..++...+..+.+.|-.... .++.+|+..++.+|+.+++++|++.|.++|..++.
T Consensus 227 ~~~L~~iYt~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~ 305 (312)
T 3hqi_A 227 KEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHAT 305 (312)
T ss_dssp HHHHHHHHHSCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred HHHHHhhcCCCCCChHHHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 3456788888765543322222 22223334555555554432 57889999999999999999999999999998875
No 196
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=90.07 E-value=3 Score=37.58 Aligned_cols=139 Identities=17% Similarity=0.186 Sum_probs=71.0
Q ss_pred ceeEEEeCCCCCeeeccCCCCCC-CceeEEEE-CC-EEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCC----cccc
Q psy11333 303 SSVERYDPQSSDWKIVAPMSKRR-CGVGVAVL-ND-LLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTS----CRTS 375 (482)
Q Consensus 303 ~~~~~~d~~~~~W~~~~~~~~~~-~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~----~r~~ 375 (482)
..+..+|+.+.+....-..+... ....++.. ++ .+|+.++.+ ..+.+||+.+.+-... -+.+. ....
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~~~-~~~~~~~~~~~~~ 84 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS-----ESLVKIDLVTGETLGR-IDLSTPEERVKSL 84 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTT-----TEEEEEETTTCCEEEE-EECCBTTEEEECT
T ss_pred CeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCC-----CeEEEEECCCCCeEee-EEcCCcccccccc
Confidence 47889999887653322222211 12334443 44 677776532 4799999988875432 11111 0011
Q ss_pred eeEEEE-CC-EEEEEecc---CCCc---ccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCE-EEEEcCCCCCCCCC
Q psy11333 376 VGVAVL-DG-FLYAVGGQ---DGVQ---CLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGF-LYAIGGSDGQSPLN 445 (482)
Q Consensus 376 ~~~~~~-~~-~lyv~GG~---~~~~---~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~ 445 (482)
.+++.. +| .+|+..+. .... ....+..||+.+.+....-+.+ .....++.. +++ ||+.+ .
T Consensus 85 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~--------~ 154 (337)
T 1pby_B 85 FGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP--RQITMLAWARDGSKLYGLG--------R 154 (337)
T ss_dssp TCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC--SSCCCEEECTTSSCEEEES--------S
T ss_pred cceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC--CCcceeEECCCCCEEEEeC--------C
Confidence 223332 44 67766421 0111 1367899999877654322222 222233333 444 66662 3
Q ss_pred eEEEEeCCCCce
Q psy11333 446 TVERFDPKLNRW 457 (482)
Q Consensus 446 ~~~~y~~~~~~W 457 (482)
.+++||+.+.+-
T Consensus 155 ~i~~~d~~~~~~ 166 (337)
T 1pby_B 155 DLHVMDPEAGTL 166 (337)
T ss_dssp SEEEEETTTTEE
T ss_pred eEEEEECCCCcE
Confidence 588888876653
No 197
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=90.00 E-value=2.9 Score=38.83 Aligned_cols=111 Identities=14% Similarity=0.088 Sum_probs=56.1
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCC-CCC---CCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCC
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPM-SKR---RCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTN 360 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~-~~~---~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 360 (482)
++ +++.|+.. ..+..||..+.+....-.. ... ......+.+ ++.+++.|+.++ ....+..||..+.
T Consensus 197 ~~-~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~--~~g~i~i~d~~~~ 268 (397)
T 1sq9_A 197 RG-LIATGFNN-----GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN--SFGCITLYETEFG 268 (397)
T ss_dssp TS-EEEEECTT-----SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET--TEEEEEEEETTTC
T ss_pred Cc-eEEEEeCC-----CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC--CCceEEEEECCCC
Confidence 45 66666532 3688899887654322111 001 122222222 667777776541 1136899999876
Q ss_pred ceeecCCCCC--C--------cccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCce
Q psy11333 361 QWSCDVAPTT--S--------CRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKW 410 (482)
Q Consensus 361 ~W~~~~~~~~--~--------~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W 410 (482)
+-.......+ . .......+.+ +++.++.|+.+ ..+..||..+.+-
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~ 325 (397)
T 1sq9_A 269 ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD-----GKLRFWDVKTKER 325 (397)
T ss_dssp CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTTEE
T ss_pred cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCC-----CeEEEEEcCCCce
Confidence 5332201100 0 1111222222 57777787754 3588899876643
No 198
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=89.94 E-value=7.2 Score=35.31 Aligned_cols=151 Identities=15% Similarity=0.204 Sum_probs=77.3
Q ss_pred cEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-C---CEEEEEecCCCCCCCCeEEEEeCCCCc--
Q psy11333 288 EVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-N---DLLYAVGGHDGQSYLNSIERYDPQTNQ-- 361 (482)
Q Consensus 288 ~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~---~~iyv~GG~~~~~~~~~~~~yd~~~~~-- 361 (482)
..+++.|+... .-..+..||..+.+............-.+++.. + +.+++.|+.++ .+..||..+.+
T Consensus 31 ~~l~~~~s~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~ 103 (357)
T 3i2n_A 31 AKFVTMGNFAR--GTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG-----NLHIWNLEAPEMP 103 (357)
T ss_dssp SEEEEEEC--C--CCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS-----CEEEECTTSCSSC
T ss_pred ceEEEecCccC--CCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCC-----eEEEEeCCCCCcc
Confidence 46666665310 124678888888776443322221211222222 2 47777777653 58899988765
Q ss_pred eeecCCCCCCcccceeE-----EEECCEEEEEeccCCCcccCeEEEEeCCCCc--eeecCCCCC--CccceEEEE-----
Q psy11333 362 WSCDVAPTTSCRTSVGV-----AVLDGFLYAVGGQDGVQCLNHVERYDPKENK--WSRVAPMTT--RRLGVAVAV----- 427 (482)
Q Consensus 362 W~~~~~~~~~~r~~~~~-----~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~--~r~~~~~~~----- 427 (482)
-..+ .....+...... ..-++..++.|+.++ .+..||+.+.. ...+..... .+...+++.
T Consensus 104 ~~~~-~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~-----~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 177 (357)
T 3i2n_A 104 VYSV-KGHKEIINAIDGIGGLGIGEGAPEIVTGSRDG-----TVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYN 177 (357)
T ss_dssp SEEE-CCCSSCEEEEEEESGGGCC-CCCEEEEEETTS-----CEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC
T ss_pred EEEE-EecccceEEEeeccccccCCCccEEEEEeCCC-----eEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccC
Confidence 2222 211111111110 123566777777543 57889888654 333332221 222222321
Q ss_pred ECCEEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 428 LGGFLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 428 ~~~~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
.++.+++.|+.+ ..+..||..+.+
T Consensus 178 ~~~~~l~~~~~d-----~~i~i~d~~~~~ 201 (357)
T 3i2n_A 178 QEERVVCAGYDN-----GDIKLFDLRNMA 201 (357)
T ss_dssp -CCCEEEEEETT-----SEEEEEETTTTE
T ss_pred CCCCEEEEEccC-----CeEEEEECccCc
Confidence 367777777765 368888887654
No 199
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=89.90 E-value=1.6 Score=45.32 Aligned_cols=106 Identities=20% Similarity=0.206 Sum_probs=65.6
Q ss_pred CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEE--C--CEEEEEeccCCCcccCeEEEEeCCCCc
Q psy11333 334 NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVL--D--GFLYAVGGQDGVQCLNHVERYDPKENK 409 (482)
Q Consensus 334 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~yd~~~~~ 409 (482)
++..++.||.+ ..+.+||..++++..+ ..+.........+.+ + +..++.||.++ .+..||..+.+
T Consensus 20 dg~~latg~~d-----g~I~vwd~~~~~~~~~-~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg-----~I~vwd~~~~~ 88 (753)
T 3jro_A 20 YGKRLATCSSD-----KTIKIFEVEGETHKLI-DTLTGHEGPVWRVDWAHPKFGTILASCSYDG-----KVLIWKEENGR 88 (753)
T ss_dssp SSCCEEEEETT-----TEEEEEEEETTEEEEE-EEECCCSSCEEEEEECCTTSCSEEEEEETTS-----CEEEEEEETTE
T ss_pred CCCeEEEEECC-----CcEEEEecCCCCCccc-eeccCCcCceEEEEecCCCCCCEEEEEeCCC-----eEEEEECCCCc
Confidence 56667777765 3688999887777655 323222222222332 3 77888888654 57889998888
Q ss_pred eeecCCCCCCccceEEEEE--C--CEEEEEcCCCCCCCCCeEEEEeCCCC
Q psy11333 410 WSRVAPMTTRRLGVAVAVL--G--GFLYAIGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 410 W~~~~~~~~~r~~~~~~~~--~--~~i~v~GG~~~~~~~~~~~~y~~~~~ 455 (482)
|..+............+.+ + +.+++.||.+ +.+.+||..+.
T Consensus 89 ~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d-----g~I~vwdl~~~ 133 (753)
T 3jro_A 89 WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKEN 133 (753)
T ss_dssp EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCSS
T ss_pred ccccccccCCCCCeEEEEECCCCCCCEEEEEeCC-----CcEEEEEeecC
Confidence 8776644432332333333 3 6788888875 36888887655
No 200
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=89.86 E-value=8.3 Score=35.84 Aligned_cols=134 Identities=12% Similarity=0.040 Sum_probs=67.2
Q ss_pred eeEEEeCCCCCeeeccCCCCCC--------------CceeEEEECCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCC
Q psy11333 304 SVERYDPQSSDWKIVAPMSKRR--------------CGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPT 369 (482)
Q Consensus 304 ~~~~~d~~~~~W~~~~~~~~~~--------------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~ 369 (482)
.+..+|..+.+....-...... .-.+++...+..+++|+.+ ..+..||..+.+-.......
T Consensus 172 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~i~~~d~~~~~~~~~~~~~ 246 (425)
T 1r5m_A 172 VTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK-----GAIFVYQITEKTPTGKLIGH 246 (425)
T ss_dssp CEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGG-----GCEEEEETTCSSCSEEECCC
T ss_pred eEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCC-----CeEEEEEcCCCceeeeeccC
Confidence 5777888776543322211111 0223333334446666654 36899999876533220111
Q ss_pred CCcccceeEEE-ECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCEEEEEcCCCCCCCCCeE
Q psy11333 370 TSCRTSVGVAV-LDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGFLYAIGGSDGQSPLNTV 447 (482)
Q Consensus 370 ~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~ 447 (482)
..+ -.+++. -+++.++.|+.++ .+..||..+.+....-.. .......+... ++ .++.|+.+ ..+
T Consensus 247 ~~~--i~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~-~l~~~~~d-----~~i 312 (425)
T 1r5m_A 247 HGP--ISVLEFNDTNKLLLSASDDG-----TLRIWHGGNGNSQNCFYG-HSQSIVSASWVGDD-KVISCSMD-----GSV 312 (425)
T ss_dssp SSC--EEEEEEETTTTEEEEEETTS-----CEEEECSSSBSCSEEECC-CSSCEEEEEEETTT-EEEEEETT-----SEE
T ss_pred CCc--eEEEEECCCCCEEEEEcCCC-----EEEEEECCCCccceEecC-CCccEEEEEECCCC-EEEEEeCC-----CcE
Confidence 111 122222 2566777777543 577888776543222111 12222333333 55 66666654 468
Q ss_pred EEEeCCCCc
Q psy11333 448 ERFDPKLNR 456 (482)
Q Consensus 448 ~~y~~~~~~ 456 (482)
.+||..+.+
T Consensus 313 ~i~d~~~~~ 321 (425)
T 1r5m_A 313 RLWSLKQNT 321 (425)
T ss_dssp EEEETTTTE
T ss_pred EEEECCCCc
Confidence 888886554
No 201
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=89.69 E-value=2.4 Score=36.49 Aligned_cols=141 Identities=11% Similarity=0.019 Sum_probs=75.3
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCC---------------CCeeeccCCC--CCCCceeEEEECCEEEEEecCCCCCC
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQS---------------SDWKIVAPMS--KRRCGVGVAVLNDLLYAVGGHDGQSY 348 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~---------------~~W~~~~~~~--~~~~~~~~~~~~~~iyv~GG~~~~~~ 348 (482)
.++++|++-| +.+|+++... ..|..++... ......+.-..++.+|++-|
T Consensus 14 ~~ge~yfFkg-------~~~wr~~~~~~~~~~~~~~~P~~I~~~W~~Lp~~~f~p~~iDaaf~~~~g~~~fFKg------ 80 (227)
T 3lp9_A 14 KNNEAYFFIN-------DKYVLLDYAPGSSRDKVLYGPTPVRDGFKSLNQTIFGSYGIDCSFDTENNEAFIFYE------ 80 (227)
T ss_dssp STTEEEEEET-------TEEEEEECCTTSSCCEEEEEEEEHHHHSGGGTTSHHHHHCCSEEEECSTTEEEEEET------
T ss_pred CCCeEEEEEC-------CEEEEEeCCCCCccccccCCceEHhhcCCcCCcccCCCCCceEEEECCCCEEEEEeC------
Confidence 4689999976 3567766521 2254442211 11222222235899999987
Q ss_pred CCeEEEEe--CC-------------CCceeecCCCCCCcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCcee
Q psy11333 349 LNSIERYD--PQ-------------TNQWSCDVAPTTSCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWS 411 (482)
Q Consensus 349 ~~~~~~yd--~~-------------~~~W~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 411 (482)
+.+++|+ +. +..|..+ +....+..--++... ++++|++-| +..|+||..+++-.
T Consensus 81 -~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gL-p~~~~p~~IDAA~~~~~~~k~yfFkG-------~~yw~~d~~~~~~~ 151 (227)
T 3lp9_A 81 -NFCALIDYAPHSKKDKIILGPKKIADVFPFF-EGTVFESGIDAAYRSTRGKEVYLFKG-------DQYARIDYGSNSMV 151 (227)
T ss_dssp -TEEEEEECCTTTCCCEEEEEEEEHHHHSGGG-TTSTTTTCCSEEEECSSTTEEEEEET-------TEEEEEETTTTEES
T ss_pred -CEEEEEeCCCCccccccccCceEHhhhcCCC-CCccCCCcccEEEEECCCCEEEEEEC-------CEEEEEeCCCcccc
Confidence 3577777 32 1224444 211001111123332 689999977 46888987654321
Q ss_pred e-----cC-CCCC------CccceEEEE--ECCEEEEEcCCCCCCCCCeEEEEeCCCC
Q psy11333 412 R-----VA-PMTT------RRLGVAVAV--LGGFLYAIGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 412 ~-----~~-~~~~------~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~y~~~~~ 455 (482)
. +. .+|. |..--++.. .++++|++-| +.-|+||..++
T Consensus 152 ~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg-------~~Ywr~d~~~~ 202 (227)
T 3lp9_A 152 NKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD-------DHYARVKVTPX 202 (227)
T ss_dssp SSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET-------TEEEEEECCSS
T ss_pred CCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC-------CEEEEEECCcc
Confidence 1 00 1221 122233333 3689999988 35799998766
No 202
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=89.52 E-value=4.3 Score=35.47 Aligned_cols=145 Identities=10% Similarity=-0.041 Sum_probs=78.4
Q ss_pred CCceeEEEeCCCCCeeeccCCCCCCCceeEEE-ECCEEEEEecCCCCCCCCeEEEEeCCC-CceeecCCCCCC-ccccee
Q psy11333 301 AISSVERYDPQSSDWKIVAPMSKRRCGVGVAV-LNDLLYAVGGHDGQSYLNSIERYDPQT-NQWSCDVAPTTS-CRTSVG 377 (482)
Q Consensus 301 ~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~-~~W~~~~~~~~~-~r~~~~ 377 (482)
.-..++.+|+.+++...+... ...-.+++. -+++.+++++ + ..++.||..+ .+...+ ..... ......
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~--~~~v~~~~~spdg~~l~~~~-~-----~~i~~~d~~~~~~~~~~-~~~~~~~~~~~~ 90 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQT--PELFEAPNWSPDGKYLLLNS-E-----GLLYRLSLAGDPSPEKV-DTGFATICNNDH 90 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEE--SSCCEEEEECTTSSEEEEEE-T-----TEEEEEESSSCCSCEEC-CCTTCCCBCSCC
T ss_pred cceeEEEEeCCCCceeeeccC--CcceEeeEECCCCCEEEEEc-C-----CeEEEEeCCCCCCceEe-ccccccccccce
Confidence 445789999988877654332 112223333 2666666664 2 3799999999 877766 32221 221222
Q ss_pred EEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CC-EEEEEcCCCCCCCCCeEEEEeCCCC
Q psy11333 378 VAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GG-FLYAIGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 378 ~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~y~~~~~ 455 (482)
...-+++.+++++.... ....++.+|..+.....+..... ...+... ++ .|++.++.++. ..++.++..+.
T Consensus 91 ~~spdg~~l~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~~---~~l~~~~~~~~ 163 (297)
T 2ojh_A 91 GISPDGALYAISDKVEF-GKSAIYLLPSTGGTPRLMTKNLP---SYWHGWSPDGKSFTYCGIRDQV---FDIYSMDIDSG 163 (297)
T ss_dssp EECTTSSEEEEEECTTT-SSCEEEEEETTCCCCEECCSSSS---EEEEEECTTSSEEEEEEEETTE---EEEEEEETTTC
T ss_pred EECCCCCEEEEEEeCCC-CcceEEEEECCCCceEEeecCCC---ccceEECCCCCEEEEEECCCCc---eEEEEEECCCC
Confidence 33346666666653221 23678889887776555543221 2222222 44 45545544321 35666767666
Q ss_pred ceeecC
Q psy11333 456 RWTAMA 461 (482)
Q Consensus 456 ~W~~~~ 461 (482)
+...+.
T Consensus 164 ~~~~~~ 169 (297)
T 2ojh_A 164 VETRLT 169 (297)
T ss_dssp CEEECC
T ss_pred cceEcc
Confidence 655543
No 203
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=89.48 E-value=6.5 Score=34.76 Aligned_cols=146 Identities=10% Similarity=0.026 Sum_probs=76.1
Q ss_pred cEEEEeccccCCCCCceeEEEeCCCCC--eeeccCCCCCCCceeEEE-ECCEEEEEecCCCCCCCCeEEEEeCCCCc--e
Q psy11333 288 EVLFAVGGWCSGDAISSVERYDPQSSD--WKIVAPMSKRRCGVGVAV-LNDLLYAVGGHDGQSYLNSIERYDPQTNQ--W 362 (482)
Q Consensus 288 ~~l~~~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W 362 (482)
+++++.|.. -..+..+|+.+.+ |+.-.. .....+.+.. -+|.|++.+ .+.+..||+ +.+ |
T Consensus 5 ~~~lv~~~~-----~~~v~~~d~~tG~~~w~~~~~--~~~~~~~~~~~pdG~ilvs~-------~~~V~~~d~-~G~~~W 69 (276)
T 3no2_A 5 QHLLVGGSG-----WNKIAIINKDTKEIVWEYPLE--KGWECNSVAATKAGEILFSY-------SKGAKMITR-DGRELW 69 (276)
T ss_dssp CEEEEECTT-----CSEEEEEETTTTEEEEEEECC--TTCCCCEEEECTTSCEEEEC-------BSEEEEECT-TSCEEE
T ss_pred CcEEEeeCC-----CCEEEEEECCCCeEEEEeCCC--ccCCCcCeEECCCCCEEEeC-------CCCEEEECC-CCCEEE
Confidence 566666542 2568889987764 654322 1112233334 488888833 246999999 443 7
Q ss_pred eecCCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCC-ceeecC--CCCCC--ccceEEEEECCEEEEEcC
Q psy11333 363 SCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKEN-KWSRVA--PMTTR--RLGVAVAVLGGFLYAIGG 437 (482)
Q Consensus 363 ~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~--~~~~~--r~~~~~~~~~~~i~v~GG 437 (482)
+.- .+.... ...+....+|++++..+.. ...++.+|+... .|+.-. ..+.+ .........+|.+++...
T Consensus 70 ~~~-~~~~~~-~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~ 143 (276)
T 3no2_A 70 NIA-APAGCE-MQTARILPDGNALVAWCGH----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF 143 (276)
T ss_dssp EEE-CCTTCE-EEEEEECTTSCEEEEEEST----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEET
T ss_pred EEc-CCCCcc-ccccEECCCCCEEEEecCC----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEec
Confidence 755 321111 1122234477777765421 136788887544 344321 11111 111223334667666654
Q ss_pred CCCCCCCCeEEEEeCCCC-ceee
Q psy11333 438 SDGQSPLNTVERFDPKLN-RWTA 459 (482)
Q Consensus 438 ~~~~~~~~~~~~y~~~~~-~W~~ 459 (482)
.+ ..+.+||++.+ .|+.
T Consensus 144 ~~-----~~v~~~d~~G~~~w~~ 161 (276)
T 3no2_A 144 AT-----SEVREIAPNGQLLNSV 161 (276)
T ss_dssp TT-----TEEEEECTTSCEEEEE
T ss_pred CC-----CEEEEECCCCCEEEEE
Confidence 32 46888888733 3654
No 204
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=89.45 E-value=10 Score=36.33 Aligned_cols=95 Identities=17% Similarity=0.235 Sum_probs=54.4
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCC--e-eec----cCCCCCCCceeEEE-------ECCEEEEEecCCCCCCCCeE
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSD--W-KIV----APMSKRRCGVGVAV-------LNDLLYAVGGHDGQSYLNSI 352 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~--W-~~~----~~~~~~~~~~~~~~-------~~~~iyv~GG~~~~~~~~~~ 352 (482)
++++|++-| +.+|+|+-.... + +.+ +.+|. .--+|+ .++++|++-| +..
T Consensus 107 ~g~~yfFkG-------~~yW~~~~~~~~~GYPk~I~~~fpGlp~---~IDAA~~~~~~~~~~~~~yfFkG-------~~y 169 (460)
T 1qhu_A 107 HTSVYLIKG-------DKVWVYTSEKNEKVYPKSLQDEFPGIPF---PLDAAVECHRGECQDEGILFFQG-------NRK 169 (460)
T ss_dssp TTEEEEEET-------TEEEEECC-------CEEHHHHSTTCCS---SCCEEEEECBBTBSSSEEEEEET-------TEE
T ss_pred CCcEEEEec-------cEEEEEeCCcccCCCCeEhhhccCCCCC---CeeEEEECCccCCCCCeEEEEec-------ccE
Confidence 589999977 457777643211 0 111 22332 222333 1678999987 468
Q ss_pred EEEeCCCCceeecC-CCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCC
Q psy11333 353 ERYDPQTNQWSCDV-APTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKEN 408 (482)
Q Consensus 353 ~~yd~~~~~W~~~~-~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~ 408 (482)
++||..+++..... +.++ . --++....|++|.+-| +..++||+.+.
T Consensus 170 w~yd~~~~~~~~~~w~gi~--~-iDAA~~~~g~~YfFkG-------~~y~rfd~~~~ 216 (460)
T 1qhu_A 170 WFWDLTTGTKKERSWPAVG--N-CTSALRWLGRYYCFQG-------NQFLRFNPVSG 216 (460)
T ss_dssp EEEETTTTEEEEECCTTSC--C-CSEEEEETTEEEEEET-------TEEEEECTTTC
T ss_pred EEEecccceeecccCCCCC--c-cchheeeCCceEEEEC-------CEEEEEcCccC
Confidence 99998877644320 2222 2 2355556799999987 35667776543
No 205
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=89.37 E-value=4 Score=38.22 Aligned_cols=104 Identities=19% Similarity=0.197 Sum_probs=59.7
Q ss_pred CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEE-ECCEEEEEeccCCCcccCeEEEEeCCCCceee
Q psy11333 334 NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAV-LDGFLYAVGGQDGVQCLNHVERYDPKENKWSR 412 (482)
Q Consensus 334 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 412 (482)
++..++.|+.+ ..+..||..+.+-......-. ..-.++.. -++..++.|+.+ ..+..||..+.+...
T Consensus 134 dg~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~h~--~~v~~~~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~~~ 201 (393)
T 1erj_A 134 DGKFLATGAED-----RLIRIWDIENRKIVMILQGHE--QDIYSLDYFPSGDKLVSGSGD-----RTVRIWDLRTGQCSL 201 (393)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTTEEEEEECCCS--SCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEE
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcEEEEEccCC--CCEEEEEEcCCCCEEEEecCC-----CcEEEEECCCCeeEE
Confidence 67777888765 368999998876543301111 11122222 256667777754 357889988776543
Q ss_pred cCCCCCCccceEEEEE--CCEEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 413 VAPMTTRRLGVAVAVL--GGFLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 413 ~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
.-.... ....++.. ++++++.|+.++ .+.+||..+.+
T Consensus 202 ~~~~~~--~v~~~~~~~~~~~~l~~~s~d~-----~v~iwd~~~~~ 240 (393)
T 1erj_A 202 TLSIED--GVTTVAVSPGDGKYIAAGSLDR-----AVRVWDSETGF 240 (393)
T ss_dssp EEECSS--CEEEEEECSTTCCEEEEEETTS-----CEEEEETTTCC
T ss_pred EEEcCC--CcEEEEEECCCCCEEEEEcCCC-----cEEEEECCCCc
Confidence 322211 12222222 667888888764 57788876554
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=89.31 E-value=11 Score=33.38 Aligned_cols=152 Identities=10% Similarity=0.103 Sum_probs=78.6
Q ss_pred CCcEEEEecccc--CCCCCceeEEEeCCCCCeeeccCC---CCCCCceeEEEE-C-CEEEEEecCCCCCCCCeEEEEeCC
Q psy11333 286 RGEVLFAVGGWC--SGDAISSVERYDPQSSDWKIVAPM---SKRRCGVGVAVL-N-DLLYAVGGHDGQSYLNSIERYDPQ 358 (482)
Q Consensus 286 ~~~~l~~~GG~~--~~~~~~~~~~~d~~~~~W~~~~~~---~~~~~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~yd~~ 358 (482)
.++.+|+.++.. .......+++||+.+.++...... .....-.+++.. + +.||+.+.. +.+.+||+.
T Consensus 27 ~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~------~~l~~~d~~ 100 (314)
T 1pjx_A 27 KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR------LGLLVVQTD 100 (314)
T ss_dssp TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT------TEEEEEETT
T ss_pred CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC------CCEEEEeCC
Confidence 457888871100 001124689999988888654320 011122333332 5 788887642 368999998
Q ss_pred CCceeec-CCCCC-Cc-ccceeEEE-ECCEEEEEeccCC----------CcccCeEEEEeCCCCceeecC-CCCCCccce
Q psy11333 359 TNQWSCD-VAPTT-SC-RTSVGVAV-LDGFLYAVGGQDG----------VQCLNHVERYDPKENKWSRVA-PMTTRRLGV 423 (482)
Q Consensus 359 ~~~W~~~-~~~~~-~~-r~~~~~~~-~~~~lyv~GG~~~----------~~~~~~~~~yd~~~~~W~~~~-~~~~~r~~~ 423 (482)
++.+.+ ..... .+ ..-.+++. -+|++|+.....+ ......+++||+. .+...+. ....+ .
T Consensus 101 -g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~---~ 175 (314)
T 1pjx_A 101 -GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFP---N 175 (314)
T ss_dssp -SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSE---E
T ss_pred -CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCc---c
Confidence 766543 22111 11 11223333 3688998764321 1112468899986 5554432 11111 2
Q ss_pred EEEEE-----CC-EEEEEcCCCCCCCCCeEEEEeCC
Q psy11333 424 AVAVL-----GG-FLYAIGGSDGQSPLNTVERFDPK 453 (482)
Q Consensus 424 ~~~~~-----~~-~i~v~GG~~~~~~~~~~~~y~~~ 453 (482)
.++.. ++ .+|+....+ +.+++||++
T Consensus 176 ~i~~~~~~d~dg~~l~v~~~~~-----~~i~~~~~~ 206 (314)
T 1pjx_A 176 GIAVRHMNDGRPYQLIVAETPT-----KKLWSYDIK 206 (314)
T ss_dssp EEEEEECTTSCEEEEEEEETTT-----TEEEEEEEE
T ss_pred eEEEecccCCCCCEEEEEECCC-----CeEEEEECC
Confidence 33333 34 577765432 468888865
No 207
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=89.25 E-value=0.73 Score=42.84 Aligned_cols=107 Identities=13% Similarity=0.172 Sum_probs=56.0
Q ss_pred CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCc-e
Q psy11333 334 NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENK-W 410 (482)
Q Consensus 334 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~-W 410 (482)
++.+++.|+.+ ..+..||..++.|+.+ ..+.........+.+ +++.++.|+.++ .+..||..+.. |
T Consensus 22 ~g~~l~~~~~d-----~~i~iw~~~~~~~~~~-~~~~~h~~~v~~~~~s~~~~~l~s~s~d~-----~v~vwd~~~~~~~ 90 (377)
T 3dwl_C 22 QRTEFVTTTAT-----NQVELYEQDGNGWKHA-RTFSDHDKIVTCVDWAPKSNRIVTCSQDR-----NAYVYEKRPDGTW 90 (377)
T ss_dssp SSSEEECCCSS-----SCBCEEEEETTEEEEC-CCBCCCSSCEEEEEECTTTCCEEEEETTS-----SEEEC------CC
T ss_pred CCCEEEEecCC-----CEEEEEEccCCceEEE-EEEecCCceEEEEEEeCCCCEEEEEeCCC-----eEEEEEcCCCCce
Confidence 66677777655 3578899999888766 444332222222222 567778887543 57888888776 5
Q ss_pred eecCCCC-CCccceEEEEE-CCEEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 411 SRVAPMT-TRRLGVAVAVL-GGFLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 411 ~~~~~~~-~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
.....+. ......++... ++..++.|+.++ .+.+||..+.+
T Consensus 91 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~ 133 (377)
T 3dwl_C 91 KQTLVLLRLNRAATFVRWSPNEDKFAVGSGAR-----VISVCYFEQEN 133 (377)
T ss_dssp CCEEECCCCSSCEEEEECCTTSSCCEEEESSS-----CEEECCC----
T ss_pred eeeeEecccCCceEEEEECCCCCEEEEEecCC-----eEEEEEECCcc
Confidence 4443322 22222222222 567777777653 57777776553
No 208
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=89.24 E-value=7.7 Score=36.13 Aligned_cols=148 Identities=15% Similarity=0.087 Sum_probs=76.1
Q ss_pred cEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCC----CCce-eEEEE-CC-EEEEEecCCCCCCCCeEEEEeCCCC
Q psy11333 288 EVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKR----RCGV-GVAVL-ND-LLYAVGGHDGQSYLNSIERYDPQTN 360 (482)
Q Consensus 288 ~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~----~~~~-~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~ 360 (482)
+.+++.|+.. ..+..||..+.+....-..... .... +++.. ++ .+++.|+.++. ...+..||..+.
T Consensus 178 ~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--~~~i~~~d~~~~ 250 (416)
T 2pm9_A 178 AHVFASAGSS-----NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN--DPSILIWDLRNA 250 (416)
T ss_dssp TTEEEEESSS-----SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS--SCCCCEEETTST
T ss_pred CcEEEEEcCC-----CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC--CceEEEEeCCCC
Confidence 4566666532 3588899988765333222211 1222 22232 33 57777775531 125788998875
Q ss_pred ceeecCCCCC--CcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CC-EEEE
Q psy11333 361 QWSCDVAPTT--SCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GG-FLYA 434 (482)
Q Consensus 361 ~W~~~~~~~~--~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~i~v 434 (482)
.-. + ..+. ....-.+++.. ++.+++.|+.++ .+..||+.+.+-...-.-.. .....++.. ++ .+++
T Consensus 251 ~~~-~-~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg-----~v~~wd~~~~~~~~~~~~~~-~~v~~~~~s~~~~~~l~ 322 (416)
T 2pm9_A 251 NTP-L-QTLNQGHQKGILSLDWCHQDEHLLLSSGRDN-----TVLLWNPESAEQLSQFPARG-NWCFKTKFAPEAPDLFA 322 (416)
T ss_dssp TSC-S-BCCCSCCSSCEEEEEECSSCSSCEEEEESSS-----EEEEECSSSCCEEEEEECSS-SCCCCEEECTTCTTEEE
T ss_pred CCC-c-EEeecCccCceeEEEeCCCCCCeEEEEeCCC-----CEEEeeCCCCccceeecCCC-CceEEEEECCCCCCEEE
Confidence 311 1 1111 11111223322 678888887643 58889987664322111111 111222333 44 6888
Q ss_pred EcCCCCCCCCCeEEEEeCCCC
Q psy11333 435 IGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 435 ~GG~~~~~~~~~~~~y~~~~~ 455 (482)
.|+.+ +.+.+||..+.
T Consensus 323 s~~~d-----~~i~iw~~~~~ 338 (416)
T 2pm9_A 323 CASFD-----NKIEVQTLQNL 338 (416)
T ss_dssp ECCSS-----SEEEEEESCCC
T ss_pred EEecC-----CcEEEEEccCC
Confidence 88865 36788887644
No 209
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=89.22 E-value=10 Score=32.92 Aligned_cols=147 Identities=16% Similarity=0.127 Sum_probs=83.0
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
++.||+... ....+.++|+....-..+.+... ....++++- ++.||+..... ....++++++....-+.
T Consensus 90 ~~~lyv~d~-----~~~~I~~~~~~g~~~~~~~~~~~-~~P~~i~vd~~~g~lyv~~~~~---~~~~I~~~~~dg~~~~~ 160 (267)
T 1npe_A 90 GRTIFWTDS-----QLDRIEVAKMDGTQRRVLFDTGL-VNPRGIVTDPVRGNLYWTDWNR---DNPKIETSHMDGTNRRI 160 (267)
T ss_dssp TTEEEEEET-----TTTEEEEEETTSCSCEEEECSSC-SSEEEEEEETTTTEEEEEECCS---SSCEEEEEETTSCCCEE
T ss_pred CCeEEEEEC-----CCCEEEEEEcCCCCEEEEEECCC-CCccEEEEeeCCCEEEEEECCC---CCcEEEEEecCCCCcEE
Confidence 578888753 22578888887654333322111 122344443 68999986321 13578899887544333
Q ss_pred cCCCCCCcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCceeec-CCCCCCccceEEEEECCEEEEEcCCCCC
Q psy11333 365 DVAPTTSCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWSRV-APMTTRRLGVAVAVLGGFLYAIGGSDGQ 441 (482)
Q Consensus 365 ~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~~~~~~r~~~~~~~~~~~i~v~GG~~~~ 441 (482)
+ .... .....+++.. +++||+.-.. .+.+.++|+.+..-..+ .....| .+++.-++.+|+....+
T Consensus 161 ~-~~~~-~~~P~gia~d~~~~~lyv~d~~-----~~~I~~~~~~g~~~~~~~~~~~~P---~gi~~d~~~lyva~~~~-- 228 (267)
T 1npe_A 161 L-AQDN-LGLPNGLTFDAFSSQLCWVDAG-----THRAECLNPAQPGRRKVLEGLQYP---FAVTSYGKNLYYTDWKT-- 228 (267)
T ss_dssp E-ECTT-CSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTEEEEEEEEECCCSE---EEEEEETTEEEEEETTT--
T ss_pred E-EECC-CCCCcEEEEcCCCCEEEEEECC-----CCEEEEEecCCCceEEEecCCCCc---eEEEEeCCEEEEEECCC--
Confidence 3 1111 1122344443 5789998642 35788999875432222 222233 34555688999975432
Q ss_pred CCCCeEEEEeCCCCce
Q psy11333 442 SPLNTVERFDPKLNRW 457 (482)
Q Consensus 442 ~~~~~~~~y~~~~~~W 457 (482)
+.+.++|+.+.+-
T Consensus 229 ---~~v~~~d~~~g~~ 241 (267)
T 1npe_A 229 ---NSVIAMDLAISKE 241 (267)
T ss_dssp ---TEEEEEETTTTEE
T ss_pred ---CeEEEEeCCCCCc
Confidence 5799999987654
No 210
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=89.13 E-value=11 Score=34.97 Aligned_cols=137 Identities=17% Similarity=0.217 Sum_probs=72.5
Q ss_pred ceeEEEeCCCCCeeecc--CCCCCCCce--eEEE--ECCEEEEEecCCCCCCCCeEEEEeCCCCc--eeecCCCCCCccc
Q psy11333 303 SSVERYDPQSSDWKIVA--PMSKRRCGV--GVAV--LNDLLYAVGGHDGQSYLNSIERYDPQTNQ--WSCDVAPTTSCRT 374 (482)
Q Consensus 303 ~~~~~~d~~~~~W~~~~--~~~~~~~~~--~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~r~ 374 (482)
..+..+|..+.+-...- ..+...... ++.. .++.+++.||.++ .+..||..... -..+ .....+
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~-----~v~~wd~~~~~~~~~~~-~~h~~~-- 251 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT-----TVRLWDLRITSRAVRTY-HGHEGD-- 251 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS-----CEEEEETTTTCCCCEEE-CCCSSC--
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC-----eEEEEECCCCCcceEEE-CCcCCC--
Confidence 35788888887653321 222222221 1222 2678888888764 68899986331 1222 111111
Q ss_pred ceeEEE-ECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCc------cceEEE-EECCEEEEEcCCCCCCCCCe
Q psy11333 375 SVGVAV-LDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRR------LGVAVA-VLGGFLYAIGGSDGQSPLNT 446 (482)
Q Consensus 375 ~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r------~~~~~~-~~~~~i~v~GG~~~~~~~~~ 446 (482)
-.+++. -++..++.|+.++ .+..||..+..-...-.....+ ...+++ ..+|++++.|+.+ ..
T Consensus 252 v~~v~~~p~~~~l~s~s~D~-----~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-----g~ 321 (380)
T 3iz6_a 252 INSVKFFPDGQRFGTGSDDG-----TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN-----GD 321 (380)
T ss_dssp CCEEEECTTSSEEEEECSSS-----CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT-----SC
T ss_pred eEEEEEecCCCeEEEEcCCC-----eEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC-----CC
Confidence 112222 2677888887654 5778888876543322111111 112222 3377888888765 36
Q ss_pred EEEEeCCCCce
Q psy11333 447 VERFDPKLNRW 457 (482)
Q Consensus 447 ~~~y~~~~~~W 457 (482)
+.+||..+.+-
T Consensus 322 i~vwd~~~~~~ 332 (380)
T 3iz6_a 322 CYVWDTLLAEM 332 (380)
T ss_dssp EEEEETTTCCE
T ss_pred EEEEECCCCce
Confidence 88999866543
No 211
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=89.08 E-value=6.4 Score=40.13 Aligned_cols=147 Identities=14% Similarity=-0.004 Sum_probs=75.5
Q ss_pred CCceeEEEeCCCC-CeeeccCCCCCCC---ceeEEE-E--CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcc
Q psy11333 301 AISSVERYDPQSS-DWKIVAPMSKRRC---GVGVAV-L--NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCR 373 (482)
Q Consensus 301 ~~~~~~~~d~~~~-~W~~~~~~~~~~~---~~~~~~-~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r 373 (482)
....++.+|+.+. .+..+........ ..+++. - ++++++.+..++ ...++.+|......+.+ ..-....
T Consensus 282 ~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g---~~~l~~~~~~~~~~~~l-~~~~~~v 357 (706)
T 2z3z_A 282 NECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDG---WNHLYLYDTTGRLIRQV-TKGEWEV 357 (706)
T ss_dssp CEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTS---SCEEEEEETTSCEEEEC-CCSSSCE
T ss_pred CeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCC---ccEEEEEECCCCEEEec-CCCCeEE
Confidence 3457899999888 6654431111110 012222 3 677666565442 35788899777777777 3322222
Q ss_pred cceeEEEECC-EEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCEEEEEcCCCCCCCCCeEEEEe
Q psy11333 374 TSVGVAVLDG-FLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGFLYAIGGSDGQSPLNTVERFD 451 (482)
Q Consensus 374 ~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~y~ 451 (482)
.......-++ .||+.+..++ .....++.+|..+.+...+.. ....+.+... +++.+++...+. ..-..++.+|
T Consensus 358 ~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~d~~~~~~~~l~~---~~~~~~~~~spdg~~l~~~~~~~-~~p~~i~l~d 432 (706)
T 2z3z_A 358 TNFAGFDPKGTRLYFESTEAS-PLERHFYCIDIKGGKTKDLTP---ESGMHRTQLSPDGSAIIDIFQSP-TVPRKVTVTN 432 (706)
T ss_dssp EEEEEECTTSSEEEEEESSSC-TTCBEEEEEETTCCCCEESCC---SSSEEEEEECTTSSEEEEEEECS-SCSCEEEEEE
T ss_pred EeeeEEcCCCCEEEEEecCCC-CceEEEEEEEcCCCCceeccC---CCceEEEEECCCCCEEEEEecCC-CCCcEEEEEE
Confidence 1111112234 5666654322 223578999998877666652 1122233322 565555543221 1224678888
Q ss_pred CCCCc
Q psy11333 452 PKLNR 456 (482)
Q Consensus 452 ~~~~~ 456 (482)
.++++
T Consensus 433 ~~~~~ 437 (706)
T 2z3z_A 433 IGKGS 437 (706)
T ss_dssp SSSCE
T ss_pred CCCCe
Confidence 76654
No 212
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=89.04 E-value=3.9 Score=42.46 Aligned_cols=147 Identities=13% Similarity=0.040 Sum_probs=75.0
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCC-ceee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTN-QWSC 364 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~~ 364 (482)
++..++.|+.. ..+..||..+.+....-.. ....-.+++.. ++...+.|+.+ ..+..||..++ ....
T Consensus 66 ~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~ 134 (814)
T 3mkq_A 66 RKNWIIVGSDD-----FRIRVFNYNTGEKVVDFEA-HPDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNWENNWALEQ 134 (814)
T ss_dssp GGTEEEEEETT-----SEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSSEEEEEETT-----SEEEEEEGGGTSEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEEEec-CCCCEEEEEEeCCCCEEEEEcCC-----CEEEEEECCCCceEEE
Confidence 45556666532 4688899888775332111 11111222222 56566667654 36889998776 3222
Q ss_pred cCCCCCCcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE---CCEEEEEcCCC
Q psy11333 365 DVAPTTSCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL---GGFLYAIGGSD 439 (482)
Q Consensus 365 ~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~---~~~i~v~GG~~ 439 (482)
..... ...-.+++.. ++..+++|+.++ .+..||..+.+-..............+... ++..++.|+.+
T Consensus 135 ~~~~~--~~~v~~~~~~p~~~~~l~~~~~dg-----~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d 207 (814)
T 3mkq_A 135 TFEGH--EHFVMCVAFNPKDPSTFASGCLDR-----TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD 207 (814)
T ss_dssp EEECC--SSCEEEEEEETTEEEEEEEEETTS-----EEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTT
T ss_pred EEcCC--CCcEEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCC
Confidence 20111 1111222332 467777877543 588888865543222211221222222222 66777777765
Q ss_pred CCCCCCeEEEEeCCCCc
Q psy11333 440 GQSPLNTVERFDPKLNR 456 (482)
Q Consensus 440 ~~~~~~~~~~y~~~~~~ 456 (482)
..+..||..+.+
T Consensus 208 -----g~i~~~d~~~~~ 219 (814)
T 3mkq_A 208 -----LTIKIWDYQTKS 219 (814)
T ss_dssp -----SEEEEEETTTTE
T ss_pred -----CEEEEEECCCCc
Confidence 367777776543
No 213
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=88.76 E-value=9 Score=34.73 Aligned_cols=142 Identities=12% Similarity=0.037 Sum_probs=75.4
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEE-ECCEEEEEecCCCCCCCCeEEEEeCCCCceeec
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAV-LNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCD 365 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 365 (482)
++.+|+++... ..+++||+.+++...... + ..-.+.+. -++.+|+... +.+++||+.+++++.+
T Consensus 60 ~~~l~~~d~~~-----~~i~~~d~~~~~~~~~~~-~--~~v~~i~~~~dg~l~v~~~-------~gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 60 SGTAWWFNILE-----RELHELHLASGRKTVHAL-P--FMGSALAKISDSKQLIASD-------DGLFLRDTATGVLTLH 124 (326)
T ss_dssp TTEEEEEEGGG-----TEEEEEETTTTEEEEEEC-S--SCEEEEEEEETTEEEEEET-------TEEEEEETTTCCEEEE
T ss_pred CCEEEEEECCC-----CEEEEEECCCCcEEEEEC-C--CcceEEEEeCCCeEEEEEC-------CCEEEEECCCCcEEEE
Confidence 46788876432 468999999886654322 2 12223333 4788877542 3589999999988766
Q ss_pred CCCCCC----cccceeEEEECCEEEEEeccC-CCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CC-EEEEEcCC
Q psy11333 366 VAPTTS----CRTSVGVAVLDGFLYAVGGQD-GVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GG-FLYAIGGS 438 (482)
Q Consensus 366 ~~~~~~----~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~i~v~GG~ 438 (482)
...+. .+.....+.-+|++|+..... .......+++|| +.+...+.. ......+++.. ++ .+|+....
T Consensus 125 -~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--~~~~~~~i~~s~dg~~lyv~~~~ 199 (326)
T 2ghs_A 125 -AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA--DISIPNSICFSPDGTTGYFVDTK 199 (326)
T ss_dssp -ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE--EESSEEEEEECTTSCEEEEEETT
T ss_pred -eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC--CCcccCCeEEcCCCCEEEEEECC
Confidence 32221 122222222367888753211 111235688888 455544321 00111123322 44 57776432
Q ss_pred CCCCCCCeEEEEeCC
Q psy11333 439 DGQSPLNTVERFDPK 453 (482)
Q Consensus 439 ~~~~~~~~~~~y~~~ 453 (482)
+ +.+++||..
T Consensus 200 ~-----~~I~~~d~~ 209 (326)
T 2ghs_A 200 V-----NRLMRVPLD 209 (326)
T ss_dssp T-----CEEEEEEBC
T ss_pred C-----CEEEEEEcc
Confidence 2 467888764
No 214
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=88.66 E-value=0.1 Score=38.85 Aligned_cols=80 Identities=13% Similarity=0.212 Sum_probs=55.2
Q ss_pred EEEEeCCeEEeceeEEeeccCHHHHHHhcCC----CCcCccceEEEccCCHHHHHHHHHHhhcCeeeeccc-cHhhHHHH
Q psy11333 40 VVLNVGARKIFAHRVVLSACSPYFRAMFTGE----LAESRQAEVTIRDIDDVAMDNLIEFCYTSHITVEES-NVQTLLPA 114 (482)
Q Consensus 40 v~i~~~~~~~~~hk~iL~~~S~~F~~~~~~~----~~e~~~~~i~l~~~~~~~~~~~l~~~y~~~~~~~~~-~~~~ll~~ 114 (482)
|+|.|+|..|...+..|..... .++... ......+.+-| |=++..|..+|+|+.+|.+.++.+ ....+++-
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~Fi-DRdp~~F~~ILnflR~g~l~~p~~~~~~~l~~E 77 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFF-DRDPDIFRHILNFYRTGKLHYPRHECISAYDEE 77 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEE-CSCTTTHHHHHHHHHHSCBCCCTTSCHHHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEE-eCCcHHHHHHHHHHhcCCCCCCCCcCHHHHHHH
Confidence 6889999999998888865432 122221 01112233444 669999999999999998766544 35678888
Q ss_pred hcccChhhH
Q psy11333 115 ACLLQLVEI 123 (482)
Q Consensus 115 a~~~~~~~L 123 (482)
|++|+++.+
T Consensus 78 a~fy~i~~l 86 (105)
T 1nn7_A 78 LAFFGLIPE 86 (105)
T ss_dssp HHHHTCCSC
T ss_pred HHHcCCCHH
Confidence 999998876
No 215
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=88.47 E-value=3 Score=37.25 Aligned_cols=106 Identities=19% Similarity=0.168 Sum_probs=58.3
Q ss_pred CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccc-eeEEEE---CCEEEEEeccCCCcccCeEEEEeCCCCc
Q psy11333 334 NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTS-VGVAVL---DGFLYAVGGQDGVQCLNHVERYDPKENK 409 (482)
Q Consensus 334 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~-~~~~~~---~~~lyv~GG~~~~~~~~~~~~yd~~~~~ 409 (482)
+++..+.||.++ ++..||..+...+.+ ..+...... .++... ++.+++.|+.++ .+..||..+.+
T Consensus 20 ~g~~las~s~D~-----~v~iw~~~~~~~~~~-~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~-----~v~iWd~~~~~ 88 (297)
T 2pm7_B 20 YGKRMATCSSDK-----TIKIFEVEGETHKLI-DTLTGHEGPVWRVDWAHPKFGTILASCSYDG-----KVMIWKEENGR 88 (297)
T ss_dssp TSSEEEEEETTS-----CEEEEEBCSSCBCCC-EEECCCSSCEEEEEECCGGGCSEEEEEETTT-----EEEEEEBSSSC
T ss_pred CCCEEEEEeCCC-----EEEEEecCCCCcEEE-EEEccccCCeEEEEecCCCcCCEEEEEcCCC-----EEEEEEcCCCc
Confidence 677788888663 688899876543322 111111111 122222 267888888653 57889998877
Q ss_pred eeecCCCCC-CccceEEEEE-C--CEEEEEcCCCCCCCCCeEEEEeCCCC
Q psy11333 410 WSRVAPMTT-RRLGVAVAVL-G--GFLYAIGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 410 W~~~~~~~~-~r~~~~~~~~-~--~~i~v~GG~~~~~~~~~~~~y~~~~~ 455 (482)
|..+..+.. .....+++.. + +.+++.|+.+ ..+.+||..+.
T Consensus 89 ~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d-----~~v~~wd~~~~ 133 (297)
T 2pm7_B 89 WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD-----GKVSVVEFKEN 133 (297)
T ss_dssp BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEEBCSS
T ss_pred eEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC-----CcEEEEEecCC
Confidence 765443221 1112222222 2 5677777765 36777776544
No 216
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=88.09 E-value=11 Score=33.81 Aligned_cols=146 Identities=15% Similarity=0.086 Sum_probs=69.3
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEECCEEEEEecCCCCCCCCeEEEEeCCCCceeecC
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDV 366 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 366 (482)
++.+++.|+.. ..+..++........................++..++.|+.++ .+..||.....-...
T Consensus 97 dg~~l~s~~~d-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~-----~~~~~d~~~~~~~~~- 165 (340)
T 4aow_A 97 DGQFALSGSWD-----GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK-----TIKLWNTLGVCKYTV- 165 (340)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTS-----CEEEECTTSCEEEEE-
T ss_pred CCCEEEEEccc-----ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCC-----eEEEEEeCCCceEEE-
Confidence 45555666532 2466777776655433322222211112222556666776553 567888765543222
Q ss_pred CCCCCcccceeEEEE----CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCEEEEEcCCCCC
Q psy11333 367 APTTSCRTSVGVAVL----DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGFLYAIGGSDGQ 441 (482)
Q Consensus 367 ~~~~~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~ 441 (482)
.... .......+.+ .+.+++.||.+ ..+..||..+.+....-.-.. ....+++.. ++.+++.|+.++
T Consensus 166 ~~~~-~~~~v~~~~~~~~~~~~~~~s~~~d-----~~i~i~d~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~s~Dg- 237 (340)
T 4aow_A 166 QDES-HSEWVSCVRFSPNSSNPIIVSCGWD-----KLVKVWNLANCKLKTNHIGHT-GYLNTVTVSPDGSLCASGGKDG- 237 (340)
T ss_dssp CSSS-CSSCEEEEEECSCSSSCEEEEEETT-----SCEEEEETTTTEEEEEECCCS-SCEEEEEECTTSSEEEEEETTC-
T ss_pred Eecc-ccCcccceEEccCCCCcEEEEEcCC-----CEEEEEECCCCceeeEecCCC-CcEEEEEECCCCCEEEEEeCCC-
Confidence 1111 1111122221 23466666653 347788887765433221111 111222222 667777777653
Q ss_pred CCCCeEEEEeCCCC
Q psy11333 442 SPLNTVERFDPKLN 455 (482)
Q Consensus 442 ~~~~~~~~y~~~~~ 455 (482)
.+.+||..+.
T Consensus 238 ----~i~iwd~~~~ 247 (340)
T 4aow_A 238 ----QAMLWDLNEG 247 (340)
T ss_dssp ----EEEEEETTTT
T ss_pred ----eEEEEEeccC
Confidence 4666665543
No 217
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=87.91 E-value=14 Score=34.76 Aligned_cols=147 Identities=14% Similarity=0.098 Sum_probs=81.6
Q ss_pred CCCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCce
Q psy11333 285 RRGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQW 362 (482)
Q Consensus 285 ~~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 362 (482)
..++.||+.... ...+.++|+.++.-..+.... ...+ .+.. ++.||+...... ..++.+++.+..-
T Consensus 139 d~~g~lyv~d~~-----~~~I~~id~~~g~~~~~~~~~--~~~~-ia~~~~g~~l~~~d~~~~----~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 139 VGNNTVLAYQRD-----DPRVRLISVDDNKVTTVHPGF--KGGK-PAVTKDKQRVYSIGWEGT----HTVYVYMKASGWA 206 (409)
T ss_dssp CSTTEEEEEETT-----TTEEEEEETTTTEEEEEEETC--CBCB-CEECTTSSEEEEEBSSTT----CEEEEEEGGGTTC
T ss_pred eCCCCEEEEecC-----CCcEEEEECCCCEEEEeeccC--CCCc-eeEecCCCcEEEEecCCC----ceEEEEEcCCCce
Confidence 346789988642 247899999987765443221 1122 3332 446777654221 2789999875532
Q ss_pred -eecCCCC-C-CcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCceeecC---CCCCCccc-e-EEEEE--CC
Q psy11333 363 -SCDVAPT-T-SCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVA---PMTTRRLG-V-AVAVL--GG 430 (482)
Q Consensus 363 -~~~~~~~-~-~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~~~~r~~-~-~~~~~--~~ 430 (482)
..+ ... + ......++++. ++.||+..+ ...+++||+.+.....+. ........ . .++.. ++
T Consensus 207 ~~~~-g~~~~~~~~~p~~iav~p~~g~lyv~d~------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g 279 (409)
T 3hrp_A 207 PTRI-GQLGSTFSGKIGAVALDETEEWLYFVDS------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDS 279 (409)
T ss_dssp EEEE-EECCTTSCSCCCBCEECTTSSEEEEECT------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTT
T ss_pred eEEe-eeccchhcCCcEEEEEeCCCCeEEEEEC------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCC
Confidence 222 111 1 11222333433 689999432 247999999877655442 11111222 1 44444 57
Q ss_pred EEEEEcCCCCCCCCCeEEEEeCCCC
Q psy11333 431 FLYAIGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 431 ~i~v~GG~~~~~~~~~~~~y~~~~~ 455 (482)
.||+....+ +.|++|++...
T Consensus 280 ~lyv~d~~~-----~~I~~~~~~g~ 299 (409)
T 3hrp_A 280 NFYMSDQNL-----SSVYKITPDGE 299 (409)
T ss_dssp EEEEEETTT-----TEEEEECTTCC
T ss_pred EEEEEeCCC-----CEEEEEecCCC
Confidence 999986433 57899987654
No 218
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=87.82 E-value=16 Score=33.19 Aligned_cols=148 Identities=14% Similarity=0.209 Sum_probs=78.9
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEE-eCCCCceee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERY-DPQTNQWSC 364 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~y-d~~~~~W~~ 364 (482)
++.+|+.|.. ..+++-+-...+|+.+.... +...++++.. ++.+|++|. .+ .+++- |.....|+.
T Consensus 132 ~~~~~~~~~~------g~v~~S~DgG~tW~~~~~~~-~~~~~~~~~~~~~~~~~~g~-~G-----~~~~S~d~gG~tW~~ 198 (327)
T 2xbg_A 132 NGSAEMITNV------GAIYRTKDSGKNWQALVQEA-IGVMRNLNRSPSGEYVAVSS-RG-----SFYSTWEPGQTAWEP 198 (327)
T ss_dssp TTEEEEEETT------CCEEEESSTTSSEEEEECSC-CCCEEEEEECTTSCEEEEET-TS-----SEEEEECTTCSSCEE
T ss_pred CCCEEEEeCC------ccEEEEcCCCCCCEEeecCC-CcceEEEEEcCCCcEEEEEC-CC-----cEEEEeCCCCCceeE
Confidence 4677776631 13565555677898876432 2233444443 566776653 21 24443 333678998
Q ss_pred cCCCCCCcccceeEEE-ECCEEEEEeccCCCcccCeEEEEeCC-CCceeecCC--CCCCccceEEEEE-CCEEEEEcCCC
Q psy11333 365 DVAPTTSCRTSVGVAV-LDGFLYAVGGQDGVQCLNHVERYDPK-ENKWSRVAP--MTTRRLGVAVAVL-GGFLYAIGGSD 439 (482)
Q Consensus 365 ~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~-~~~W~~~~~--~~~~r~~~~~~~~-~~~i~v~GG~~ 439 (482)
+ .. +.+.....++. -++.+|+.+.. + .++..+.. ..+|+.+.. ++.......++.. ++.+|+.|+.
T Consensus 199 ~-~~-~~~~~~~~~~~~~~g~~~~~~~~-G-----~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~- 269 (327)
T 2xbg_A 199 H-NR-TTSRRLHNMGFTPDGRLWMIVNG-G-----KIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGA- 269 (327)
T ss_dssp E-EC-CSSSCEEEEEECTTSCEEEEETT-T-----EEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEEST-
T ss_pred C-CC-CCCCccceeEECCCCCEEEEeCC-c-----eEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCC-
Confidence 8 32 22333344443 36788877642 1 23343222 457987753 2332223333333 6789998773
Q ss_pred CCCCCCeEEEEeCCCCceeecC
Q psy11333 440 GQSPLNTVERFDPKLNRWTAMA 461 (482)
Q Consensus 440 ~~~~~~~~~~y~~~~~~W~~~~ 461 (482)
..+++=.-...+|+.+.
T Consensus 270 -----g~i~~S~DgG~tW~~~~ 286 (327)
T 2xbg_A 270 -----GALLCSQDGGQTWQQDV 286 (327)
T ss_dssp -----TCEEEESSTTSSCEECG
T ss_pred -----CeEEEeCCCCcccEEcC
Confidence 23444333457899875
No 219
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=87.67 E-value=9.6 Score=38.00 Aligned_cols=117 Identities=14% Similarity=0.211 Sum_probs=67.3
Q ss_pred eEEEECCEEEEEecCCCCCCCCeEEEEeCCCCc--eeecCCCCCCc------ccceeEEEECCEEEEEeccCCCcccCeE
Q psy11333 329 GVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQ--WSCDVAPTTSC------RTSVGVAVLDGFLYAVGGQDGVQCLNHV 400 (482)
Q Consensus 329 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~------r~~~~~~~~~~~lyv~GG~~~~~~~~~~ 400 (482)
+-++.++.||+.++. ..++++|..+.+ |+.- ...+.. ....+.++.+++||+... -..+
T Consensus 63 ~P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~-~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~------dg~l 129 (582)
T 1flg_A 63 QAIVSDGVIYVTASY------SRLFALDAKTGKRLWTYN-HRLPDDIRPCCDVVNRGAAIYGDKVFFGTL------DASV 129 (582)
T ss_dssp CCEEETTEEEEEETT------TEEEEEESSSCCEEEEEE-CCCCTTCCCSSCSCCCCCEEETTEEEEEET------TTEE
T ss_pred ccEEECCEEEEEcCC------CCEEEEECCCCcEEEEEc-CCCCcccccccccCCCccEEECCEEEEEeC------CCEE
Confidence 345679999998753 248999998776 9865 222211 011344578999988532 2468
Q ss_pred EEEeCCCC--ceeecCCCCCCc--cceEEEEECC------EEEEEcCCCC-CCCCCeEEEEeCCCC--ceee
Q psy11333 401 ERYDPKEN--KWSRVAPMTTRR--LGVAVAVLGG------FLYAIGGSDG-QSPLNTVERFDPKLN--RWTA 459 (482)
Q Consensus 401 ~~yd~~~~--~W~~~~~~~~~r--~~~~~~~~~~------~i~v~GG~~~-~~~~~~~~~y~~~~~--~W~~ 459 (482)
.++|.+|. .|+.-..-+... ...+-++.++ .+|+ |...+ ......++.||+++. .|+.
T Consensus 130 ~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 130 VALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIH-GSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEE-CCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred EEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEE-eccccccCCCCEEEEEECCCCCEEeec
Confidence 99999876 487543221111 1122234455 5554 33211 112357999998865 4864
No 220
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=87.66 E-value=7.2 Score=36.08 Aligned_cols=146 Identities=16% Similarity=0.075 Sum_probs=73.4
Q ss_pred EEEEeccccCCCCCceeEEEeCCCCC----eeeccCCCCCCCc-eeEEEE-C----C---EEEEEecCCCCCCCCeEEEE
Q psy11333 289 VLFAVGGWCSGDAISSVERYDPQSSD----WKIVAPMSKRRCG-VGVAVL-N----D---LLYAVGGHDGQSYLNSIERY 355 (482)
Q Consensus 289 ~l~~~GG~~~~~~~~~~~~~d~~~~~----W~~~~~~~~~~~~-~~~~~~-~----~---~iyv~GG~~~~~~~~~~~~y 355 (482)
.+++.|+.+ ..+..||..+.. +.....+...... .+++.. + + .+++.|+.++ .+..|
T Consensus 27 ~~l~s~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg-----~i~iw 96 (397)
T 1sq9_A 27 SFTVSCSGD-----GYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSG-----DLLFY 96 (397)
T ss_dssp SEEEEEETT-----SEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTS-----CEEEE
T ss_pred CeEEEEcCC-----CEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCC-----CEEEE
Confidence 455666532 367788887766 2222111111111 222232 4 6 7778887653 58899
Q ss_pred eCCCCc------eeecCCCCCCc---ccceeEEEE-----CCEE-EEEeccCCCcccCeEEEEeCCC------Cc---ee
Q psy11333 356 DPQTNQ------WSCDVAPTTSC---RTSVGVAVL-----DGFL-YAVGGQDGVQCLNHVERYDPKE------NK---WS 411 (482)
Q Consensus 356 d~~~~~------W~~~~~~~~~~---r~~~~~~~~-----~~~l-yv~GG~~~~~~~~~~~~yd~~~------~~---W~ 411 (482)
|..+.+ +..+ ...+.. ..-.++... ++.. +++|+.++ .+..||..+ .+ |.
T Consensus 97 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~ 170 (397)
T 1sq9_A 97 RITREDETKKVIFEKL-DLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG-----TTYIWKFHPFADESNSLTLNWS 170 (397)
T ss_dssp EEEECTTTCCEEEEEE-CCSCTTGGGSCEEEEEEECCC----CEEEEEEETTS-----CEEEEEEESSSSHHHHTTTCCC
T ss_pred EccCCcccccccceee-cccccccCCCcEEEEEEeeccCCCCceEEEEEeCCC-----cEEEEeCCccccccccceeecc
Confidence 988776 6666 333211 112233333 5666 77777543 466777665 22 11
Q ss_pred ecCCC--------CCCccceEEEEE-CCEEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 412 RVAPM--------TTRRLGVAVAVL-GGFLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 412 ~~~~~--------~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
....+ .......++... ++ +++.|+.+ ..+.+||..+.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-----g~i~i~d~~~~~ 218 (397)
T 1sq9_A 171 PTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN-----GTVQISELSTLR 218 (397)
T ss_dssp CEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT-----SEEEEEETTTTE
T ss_pred CcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC-----CcEEEEECCCCc
Confidence 11011 112222333333 56 77777665 468888887654
No 221
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=87.51 E-value=27 Score=35.58 Aligned_cols=169 Identities=14% Similarity=0.074 Sum_probs=88.3
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEECCEEEEEecCCCC--------CCCCeEEEEeC
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVLNDLLYAVGGHDGQ--------SYLNSIERYDP 357 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~--------~~~~~~~~yd~ 357 (482)
-+++..+++-...+.....++.+|..+++.... .++..+....+-. |++-++++..+.. .....++.++.
T Consensus 138 pDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~l 215 (693)
T 3iuj_A 138 RDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRL 215 (693)
T ss_dssp TTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEET
T ss_pred CCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEEC
Confidence 355555554333233335789999999987543 1111112223334 6653334433321 34567999998
Q ss_pred CCCcee--ecCCCCCC--cccceeE-EEECCEEEEEeccCCCcccCeEEEEeCCCC--ceeecCCCCCCccceEEEEECC
Q psy11333 358 QTNQWS--CDVAPTTS--CRTSVGV-AVLDGFLYAVGGQDGVQCLNHVERYDPKEN--KWSRVAPMTTRRLGVAVAVLGG 430 (482)
Q Consensus 358 ~~~~W~--~~~~~~~~--~r~~~~~-~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~r~~~~~~~~~~ 430 (482)
.+.+=+ .+ -..+. +....+. ..-+|+..++....+. ..+.++.+|..+. .|..+..-..... ......++
T Consensus 216 gt~~~~~~~v-~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-~~~~i~~~d~~~~~~~~~~l~~~~~~~~-~~~~~~g~ 292 (693)
T 3iuj_A 216 GTAQEDDRLV-FGAIPAQHHRYVGATVTEDDRFLLISAANST-SGNRLYVKDLSQENAPLLTVQGDLDADV-SLVDNKGS 292 (693)
T ss_dssp TSCGGGCEEE-ESCSGGGCCSEEEEEECTTSCEEEEEEESSS-SCCEEEEEETTSTTCCCEEEECSSSSCE-EEEEEETT
T ss_pred CCCcccceEE-EecCCCCCeEEEEEEEcCCCCEEEEEEccCC-CCcEEEEEECCCCCCceEEEeCCCCceE-EEEeccCC
Confidence 776532 22 11111 2222222 2335654444322111 1358899998765 6777654322221 22344578
Q ss_pred EEEEEcCCCCCCCCCeEEEEeCCCC---ceeecC
Q psy11333 431 FLYAIGGSDGQSPLNTVERFDPKLN---RWTAMA 461 (482)
Q Consensus 431 ~i~v~GG~~~~~~~~~~~~y~~~~~---~W~~~~ 461 (482)
.+|+....++ ....++.+|..+. .|+.+.
T Consensus 293 ~l~~~t~~~~--~~~~l~~~d~~~~~~~~~~~l~ 324 (693)
T 3iuj_A 293 TLYLLTNRDA--PNRRLVTVDAANPGPAHWRDLI 324 (693)
T ss_dssp EEEEEECTTC--TTCEEEEEETTSCCGGGCEEEE
T ss_pred EEEEEECCCC--CCCEEEEEeCCCCCccccEEEe
Confidence 9999987543 2467999998753 487764
No 222
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=87.50 E-value=11 Score=38.84 Aligned_cols=150 Identities=19% Similarity=0.168 Sum_probs=81.3
Q ss_pred CCceeEEEeCCCC--C-eeeccCCCCCCCceeEEEECCEEEEEecCCCCCCCCeEEEEeCCC--CceeecCCCCCCcccc
Q psy11333 301 AISSVERYDPQSS--D-WKIVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQT--NQWSCDVAPTTSCRTS 375 (482)
Q Consensus 301 ~~~~~~~~d~~~~--~-W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~--~~W~~~~~~~~~~r~~ 375 (482)
..+.++.+|..+. . |..+..-...... .+..-++.||+....+ .....++.+|..+ ..|+.+.+.... . -
T Consensus 292 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~-~~~~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~l~~~~~~-~-l 366 (741)
T 1yr2_A 292 PVNTVHVARVTNGKIGPVTALIPDLKAQWD-FVDGVGDQLWFVSGDG--APLKKIVRVDLSGSTPRFDTVVPESKD-N-L 366 (741)
T ss_dssp SCCEEEEEEEETTEECCCEEEECSSSSCEE-EEEEETTEEEEEECTT--CTTCEEEEEECSSSSCEEEEEECCCSS-E-E
T ss_pred CcceEEEEECCCCCCcccEEecCCCCceEE-EEeccCCEEEEEECCC--CCCCEEEEEeCCCCccccEEEecCCCC-e-E
Confidence 3568899998877 6 7776543222211 1223467777775432 2235799999988 579988322221 1 1
Q ss_pred eeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEE-ECC-EEEEEc-CCCCCCCCCeEEEEeC
Q psy11333 376 VGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAV-LGG-FLYAIG-GSDGQSPLNTVERFDP 452 (482)
Q Consensus 376 ~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~-~i~v~G-G~~~~~~~~~~~~y~~ 452 (482)
.++...++.+++....++ ...++.+|+....-..+. .|.......... -++ .|++.. +.. .-.+++.||.
T Consensus 367 ~~~~~~~~~lv~~~~~dg---~~~l~~~~~~g~~~~~l~-~~~~~~v~~~~~s~d~~~l~~~~ss~~---~P~~i~~~d~ 439 (741)
T 1yr2_A 367 ESVGIAGNRLFASYIHDA---KSQVLAFDLDGKPAGAVS-LPGIGSASGLSGRPGDRHAYLSFSSFT---QPATVLALDP 439 (741)
T ss_dssp EEEEEEBTEEEEEEEETT---EEEEEEEETTSCEEEECB-CSSSCEEEEEECCBTCSCEEEEEEETT---EEEEEEEEET
T ss_pred EEEEEECCEEEEEEEECC---EEEEEEEeCCCCceeecc-CCCCeEEEEeecCCCCCEEEEEEcCCC---CCCEEEEEEC
Confidence 233445888888876544 246888887544333332 222211111111 133 344332 221 1246889998
Q ss_pred CCCceeecCC
Q psy11333 453 KLNRWTAMAP 462 (482)
Q Consensus 453 ~~~~W~~~~~ 462 (482)
.+++.+.+..
T Consensus 440 ~tg~~~~l~~ 449 (741)
T 1yr2_A 440 ATAKTTPWEP 449 (741)
T ss_dssp TTTEEEECSC
T ss_pred CCCcEEEEec
Confidence 8877666643
No 223
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=87.46 E-value=6.2 Score=39.87 Aligned_cols=148 Identities=13% Similarity=0.068 Sum_probs=81.4
Q ss_pred ceeEEEeCCC------CCeeecc-CCCCCCCceeEEE-ECCEEEEEecCCCCC---CCCeEEEEeCC-CC---ceeecCC
Q psy11333 303 SSVERYDPQS------SDWKIVA-PMSKRRCGVGVAV-LNDLLYAVGGHDGQS---YLNSIERYDPQ-TN---QWSCDVA 367 (482)
Q Consensus 303 ~~~~~~d~~~------~~W~~~~-~~~~~~~~~~~~~-~~~~iyv~GG~~~~~---~~~~~~~yd~~-~~---~W~~~~~ 367 (482)
..++.+|..+ .....+. .-. ....+.+. -+|+..++.+.+... ...+++.+|.. ++ ..+.+ .
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l-~ 237 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAH--RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTL-L 237 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCS--SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEE-E
T ss_pred eEEEEEECCCCccccCCceeEEEecCC--CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEe-C
Confidence 5789999988 5655544 211 11112222 266544444433211 12579999998 56 44444 1
Q ss_pred CCCCcccceeEE-EECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCc----c---ceEEEEE-CCEEEEEcCC
Q psy11333 368 PTTSCRTSVGVA-VLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRR----L---GVAVAVL-GGFLYAIGGS 438 (482)
Q Consensus 368 ~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r----~---~~~~~~~-~~~i~v~GG~ 438 (482)
.-. .......+ .-+|++|+.+..++ ...++.+|+.+.+|..+.+..... . ....+.. ++++++.+..
T Consensus 238 ~~~-~~~~~~~~~spdg~l~~~~~~~~---~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~ 313 (662)
T 3azo_A 238 GGP-EEAIAQAEWAPDGSLIVATDRTG---WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK 313 (662)
T ss_dssp EET-TBCEEEEEECTTSCEEEEECTTS---SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS
T ss_pred CCC-CceEcceEECCCCeEEEEECCCC---CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc
Confidence 110 11111222 23788887776543 247999999888888776432211 0 1223333 6788777765
Q ss_pred CCCCCCCeEEEEeCCCCceeecC
Q psy11333 439 DGQSPLNTVERFDPKLNRWTAMA 461 (482)
Q Consensus 439 ~~~~~~~~~~~y~~~~~~W~~~~ 461 (482)
+ ...++.+|..+.+...+.
T Consensus 314 -~---~~~l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 314 -G---AAVLGILDPESGELVDAA 332 (662)
T ss_dssp -S---SCEEEEEETTTTEEEECC
T ss_pred -C---ccEEEEEECCCCcEEEec
Confidence 3 357888898877766653
No 224
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=87.33 E-value=11 Score=33.90 Aligned_cols=135 Identities=11% Similarity=0.068 Sum_probs=72.6
Q ss_pred ceeEEEeCCCCCeeecc-CCCCCCCceeEEEE-CC-EEEEEecCCCCCCCCeEEEEeCCCC---ceeecCCCCCCcccce
Q psy11333 303 SSVERYDPQSSDWKIVA-PMSKRRCGVGVAVL-ND-LLYAVGGHDGQSYLNSIERYDPQTN---QWSCDVAPTTSCRTSV 376 (482)
Q Consensus 303 ~~~~~~d~~~~~W~~~~-~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~---~W~~~~~~~~~~r~~~ 376 (482)
..+++||+.+.+..... .+.. ..+++.- ++ .||+.-.. .+.+++|++.+. .++.. ..++-| .
T Consensus 165 g~v~~~d~~~~~~~~~~~~~~~---p~gia~~~dg~~lyv~d~~-----~~~I~~~~~~~~~~~~~~~~-~~~~gP---~ 232 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELHV---PGGAEVSADSSFVLVAEFL-----SHQIVKYWLEGPKKGTAEVL-VKIPNP---G 232 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEESC---CCEEEECTTSSEEEEEEGG-----GTEEEEEESSSTTTTCEEEE-EECSSE---E
T ss_pred ceEEEEeCCCCEEEEeccCCcc---CcceEECCCCCEEEEEeCC-----CCeEEEEECCCCcCCccceE-EeCCCC---C
Confidence 56899999887765432 2212 2244443 44 58887432 257999998753 34333 222211 2
Q ss_pred eEEE-ECCEEEEEeccCCC-----cccCeEEEEeCCCCceeecCCCCC---CccceEEEEECCEEEEEcCCCCCCCCCeE
Q psy11333 377 GVAV-LDGFLYAVGGQDGV-----QCLNHVERYDPKENKWSRVAPMTT---RRLGVAVAVLGGFLYAIGGSDGQSPLNTV 447 (482)
Q Consensus 377 ~~~~-~~~~lyv~GG~~~~-----~~~~~~~~yd~~~~~W~~~~~~~~---~r~~~~~~~~~~~i~v~GG~~~~~~~~~~ 447 (482)
++++ -+|.||+....... .....+.+||+....-..+.. |. .....+++..+++||+.+..+ +.+
T Consensus 233 gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~-~~g~~~~~~~~~~~~~g~L~v~~~~~-----~~i 306 (322)
T 2fp8_A 233 NIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPL-PPPFAGEHFEQIQEHDGLLYIGTLFH-----GSV 306 (322)
T ss_dssp EEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEEC-CTTTTTSCCCEEEEETTEEEEECSSC-----SEE
T ss_pred CeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEEC-CCCCccccceEEEEeCCEEEEeecCC-----Cce
Confidence 2333 25789988643100 112468899987544433332 21 122333445688999886443 578
Q ss_pred EEEeCCCC
Q psy11333 448 ERFDPKLN 455 (482)
Q Consensus 448 ~~y~~~~~ 455 (482)
.+|++..+
T Consensus 307 ~~~~~~~~ 314 (322)
T 2fp8_A 307 GILVYDKK 314 (322)
T ss_dssp EEEEC---
T ss_pred EEEecccc
Confidence 89987644
No 225
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=87.31 E-value=5.2 Score=36.29 Aligned_cols=143 Identities=14% Similarity=0.184 Sum_probs=72.4
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCC--eeeccCCCC--CCCceeEEE-----ECCEEEEEecCCCCCCCCeEEEEeC
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSD--WKIVAPMSK--RRCGVGVAV-----LNDLLYAVGGHDGQSYLNSIERYDP 357 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~--~~~~~~~~~-----~~~~iyv~GG~~~~~~~~~~~~yd~ 357 (482)
++..++.|+.. ..+..||..+.. ...+..... .+.-.+++. -++.+++.|+.+ ..+..||.
T Consensus 128 ~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~d~ 197 (357)
T 3i2n_A 128 GAPEIVTGSRD-----GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN-----GDIKLFDL 197 (357)
T ss_dssp CCCEEEEEETT-----SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT-----SEEEEEET
T ss_pred CccEEEEEeCC-----CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC-----CeEEEEEC
Confidence 44555666532 357888887765 222222111 112222221 367777777754 37899999
Q ss_pred CCCceeecCCCCCCcccceeEEEE----CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCC------CCCccceEEEE
Q psy11333 358 QTNQWSCDVAPTTSCRTSVGVAVL----DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPM------TTRRLGVAVAV 427 (482)
Q Consensus 358 ~~~~W~~~~~~~~~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~------~~~r~~~~~~~ 427 (482)
.+.+-... ..... .-.++... ++..+++|+.++ .+..||..+.+- +..+ ........+..
T Consensus 198 ~~~~~~~~-~~~~~--~v~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~--~~~~~~~~~~~~~~~v~~~~~ 267 (357)
T 3i2n_A 198 RNMALRWE-TNIKN--GVCSLEFDRKDISMNKLVATSLEG-----KFHVFDMRTQHP--TKGFASVSEKAHKSTVWQVRH 267 (357)
T ss_dssp TTTEEEEE-EECSS--CEEEEEESCSSSSCCEEEEEESTT-----EEEEEEEEEEET--TTEEEEEEEECCSSCEEEEEE
T ss_pred ccCceeee-cCCCC--ceEEEEcCCCCCCCCEEEEECCCC-----eEEEEeCcCCCc--ccceeeeccCCCcCCEEEEEE
Confidence 88764332 11111 12233333 567777776543 466777654321 1111 11222233333
Q ss_pred E-CCE-EEEEcCCCCCCCCCeEEEEeCCC
Q psy11333 428 L-GGF-LYAIGGSDGQSPLNTVERFDPKL 454 (482)
Q Consensus 428 ~-~~~-i~v~GG~~~~~~~~~~~~y~~~~ 454 (482)
. ++. +++.|+.++ .+.+||..+
T Consensus 268 ~~~~~~~l~~~~~dg-----~i~iwd~~~ 291 (357)
T 3i2n_A 268 LPQNRELFLTAGGAG-----GLHLWKYEY 291 (357)
T ss_dssp ETTEEEEEEEEETTS-----EEEEEEEEC
T ss_pred CCCCCcEEEEEeCCC-----cEEEeecCC
Confidence 3 455 777777653 577777653
No 226
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=87.29 E-value=5.2 Score=37.10 Aligned_cols=146 Identities=12% Similarity=0.115 Sum_probs=72.7
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE----CCEEEEEecCCCCCCCCeEEEEeCCCCce
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL----NDLLYAVGGHDGQSYLNSIERYDPQTNQW 362 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 362 (482)
++.+++.|+.. ..+..+|..+.+....-..+.+. .+.... ++.+++.|+.+ ..+..||..+.+-
T Consensus 111 ~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-----~~v~~~d~~~~~~ 178 (408)
T 4a11_B 111 DTGMFTSSSFD-----KTLKVWDTNTLQTADVFNFEETV--YSHHMSPVSTKHCLVAVGTRG-----PKVQLCDLKSGSC 178 (408)
T ss_dssp CTTCEEEEETT-----SEEEEEETTTTEEEEEEECSSCE--EEEEECSSCSSCCEEEEEESS-----SSEEEEESSSSCC
T ss_pred CCcEEEEEeCC-----CeEEEeeCCCCccceeccCCCce--eeeEeecCCCCCcEEEEEcCC-----CeEEEEeCCCcce
Confidence 34455555532 36788888887654333222221 222221 34477777755 3688999887653
Q ss_pred eecCCCCCCcccceeEEEE-CCE-EEEEeccCCCcccCeEEEEeCCCCc--eeecCC-------------CCCCccceEE
Q psy11333 363 SCDVAPTTSCRTSVGVAVL-DGF-LYAVGGQDGVQCLNHVERYDPKENK--WSRVAP-------------MTTRRLGVAV 425 (482)
Q Consensus 363 ~~~~~~~~~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~-------------~~~~r~~~~~ 425 (482)
.........+ -.++... ++. +++.|+.++ .+..||..+.. ...+.. ........++
T Consensus 179 ~~~~~~~~~~--v~~~~~~~~~~~ll~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 251 (408)
T 4a11_B 179 SHILQGHRQE--ILAVSWSPRYDYILATASADS-----RVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGL 251 (408)
T ss_dssp CEEECCCCSC--EEEEEECSSCTTEEEEEETTS-----CEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEE
T ss_pred eeeecCCCCc--EEEEEECCCCCcEEEEEcCCC-----cEEEEECCCCCcccccccccccccceeeccccccccCceeEE
Confidence 3220111111 1122222 333 777887543 47778876542 111100 0111111222
Q ss_pred EEE-CCEEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 426 AVL-GGFLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 426 ~~~-~~~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
+.. ++..++.|+.++ .+.+||..+.+
T Consensus 252 ~~~~~~~~l~~~~~dg-----~i~vwd~~~~~ 278 (408)
T 4a11_B 252 CFTSDGLHLLTVGTDN-----RMRLWNSSNGE 278 (408)
T ss_dssp EECTTSSEEEEEETTS-----CEEEEETTTCC
T ss_pred EEcCCCCEEEEecCCC-----eEEEEECCCCc
Confidence 222 667777777653 58889887654
No 227
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=87.19 E-value=5.5 Score=43.83 Aligned_cols=143 Identities=14% Similarity=0.129 Sum_probs=75.6
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
++..++.||.. ..+..||..+.+.... +.........+.+ ++...+.||.+ ..+.+||..+.+...
T Consensus 626 ~~~~l~s~~~d-----~~i~vw~~~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~~~d-----~~v~vwd~~~~~~~~ 693 (1249)
T 3sfz_A 626 DGQRIASCGAD-----KTLQVFKAETGEKLLD--IKAHEDEVLCCAFSSDDSYIATCSAD-----KKVKIWDSATGKLVH 693 (1249)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEE
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCCEEEE--eccCCCCEEEEEEecCCCEEEEEeCC-----CeEEEEECCCCceEE
Confidence 45555666532 3578889888764321 1111122222222 66777777755 369999999876443
Q ss_pred cCCCCCCcccceeEEEE----CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEE-ECCEEEEEcCCC
Q psy11333 365 DVAPTTSCRTSVGVAVL----DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAV-LGGFLYAIGGSD 439 (482)
Q Consensus 365 ~~~~~~~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~ 439 (482)
.... .......+.+ ++.+++.|+.++ .+..||..+.+....-.-.. ....+++. -++..++.|+.+
T Consensus 694 ~~~~---~~~~v~~~~~~~~~~~~~l~sg~~d~-----~v~vwd~~~~~~~~~~~~h~-~~v~~~~~sp~~~~l~s~s~d 764 (1249)
T 3sfz_A 694 TYDE---HSEQVNCCHFTNKSNHLLLATGSNDF-----FLKLWDLNQKECRNTMFGHT-NSVNHCRFSPDDELLASCSAD 764 (1249)
T ss_dssp EEEC---CSSCEEEEEECSSSSCCEEEEEETTS-----CEEEEETTSSSEEEEECCCS-SCEEEEEECSSTTEEEEEESS
T ss_pred EEcC---CCCcEEEEEEecCCCceEEEEEeCCC-----eEEEEECCCcchhheecCCC-CCEEEEEEecCCCEEEEEECC
Confidence 2011 1111222222 345666666543 57889988776433221111 11122222 266777777765
Q ss_pred CCCCCCeEEEEeCCCC
Q psy11333 440 GQSPLNTVERFDPKLN 455 (482)
Q Consensus 440 ~~~~~~~~~~y~~~~~ 455 (482)
+.+..||..+.
T Consensus 765 -----g~v~vwd~~~~ 775 (1249)
T 3sfz_A 765 -----GTLRLWDVRSA 775 (1249)
T ss_dssp -----SEEEEEEGGGT
T ss_pred -----CeEEEEeCCCC
Confidence 36778877654
No 228
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=87.10 E-value=7.4 Score=35.32 Aligned_cols=105 Identities=14% Similarity=0.091 Sum_probs=57.0
Q ss_pred cEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCce-eEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 288 EVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGV-GVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 288 ~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
+.+++.|+.. ..+..||..+.+-... +....... +++.. ++.+++.|+.++ .+..||..+.+-..
T Consensus 85 ~~~l~~~~~d-----g~i~v~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~ 152 (366)
T 3k26_A 85 HPLLAVAGSR-----GIIRIINPITMQCIKH--YVGHGNAINELKFHPRDPNLLLSVSKDH-----ALRLWNIQTDTLVA 152 (366)
T ss_dssp CEEEEEEETT-----CEEEEECTTTCCEEEE--EESCCSCEEEEEECSSCTTEEEEEETTS-----CEEEEETTTTEEEE
T ss_pred CCEEEEecCC-----CEEEEEEchhceEeee--ecCCCCcEEEEEECCCCCCEEEEEeCCC-----eEEEEEeecCeEEE
Confidence 5566676642 3688888887653221 11111122 22222 567888887653 68999998876543
Q ss_pred cCCCCCCcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCc
Q psy11333 365 DVAPTTSCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENK 409 (482)
Q Consensus 365 ~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~ 409 (482)
....+.........+.+ ++..++.||.++ .+..||..+.+
T Consensus 153 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~ 194 (366)
T 3k26_A 153 IFGGVEGHRDEVLSADYDLLGEKIMSCGMDH-----SLKLWRINSKR 194 (366)
T ss_dssp EECSTTSCSSCEEEEEECTTSSEEEEEETTS-----CEEEEESCSHH
T ss_pred EecccccccCceeEEEECCCCCEEEEecCCC-----CEEEEECCCCc
Confidence 31111212222222222 466777777543 57788887543
No 229
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=87.10 E-value=12 Score=34.86 Aligned_cols=143 Identities=13% Similarity=0.095 Sum_probs=78.6
Q ss_pred eEEEeCCC--CCeeeccCCCCCCCceeEEEE---CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCC--CCCc--c--
Q psy11333 305 VERYDPQS--SDWKIVAPMSKRRCGVGVAVL---NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAP--TTSC--R-- 373 (482)
Q Consensus 305 ~~~~d~~~--~~W~~~~~~~~~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~--~~~~--r-- 373 (482)
++.++... .+|+...+......-++++.- .+.||+.+..... -..+++.+....+|+.+..+ .+.. +
T Consensus 33 l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~--g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~ 110 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHL--GPTVFRSDDGGGNWTEATRPPAFNKAPEGET 110 (394)
T ss_dssp EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--C--CEEEEEESSTTSCCEECSBCCCCCCCC----
T ss_pred eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCC--CccEEEeCCCCCCceECCccccCCCcccccc
Confidence 67777655 799876422222222333332 4678876542111 12578888788899988322 1111 1
Q ss_pred -----cceeEEEE----CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCC---CC--------------CccceEEEE
Q psy11333 374 -----TSVGVAVL----DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPM---TT--------------RRLGVAVAV 427 (482)
Q Consensus 374 -----~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~---~~--------------~r~~~~~~~ 427 (482)
.-.++++. .+.+|+.+. ...+++.+-...+|+.+... |. ....+.+++
T Consensus 111 ~~~~~~i~~l~~~~~~~~~~l~~g~~------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~ 184 (394)
T 3b7f_A 111 GRVVDHVFWLTPGHASEPGTWYAGTS------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILV 184 (394)
T ss_dssp CCCCCEEEEEEECCTTSTTCEEEEEE------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEE
T ss_pred cccccceeEEEeCCCCCCCEEEEEec------CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEE
Confidence 11133333 577887642 13577887778899987532 21 111233333
Q ss_pred E---CCEEEEEcCCCCCCCCCeEEEEeCCCCceeecC
Q psy11333 428 L---GGFLYAIGGSDGQSPLNTVERFDPKLNRWTAMA 461 (482)
Q Consensus 428 ~---~~~i~v~GG~~~~~~~~~~~~y~~~~~~W~~~~ 461 (482)
- .+.||+..+. ..+++.+....+|+.+.
T Consensus 185 d~~~~~~l~vg~~~------ggl~~s~DgG~tW~~~~ 215 (394)
T 3b7f_A 185 DPRDPKHLYIGMSS------GGVFESTDAGTDWKPLN 215 (394)
T ss_dssp CTTCTTCEEEEEET------BEEEEESSTTSSCEECC
T ss_pred CCCCCCEEEEEECC------CCEEEECCCCCCceECC
Confidence 2 3568876432 24788877788999875
No 230
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=86.94 E-value=16 Score=32.26 Aligned_cols=153 Identities=18% Similarity=0.214 Sum_probs=79.8
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCC---CCceeEEE-ECCEEEEE----ecCC------C--CCCC
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKR---RCGVGVAV-LNDLLYAV----GGHD------G--QSYL 349 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~---~~~~~~~~-~~~~iyv~----GG~~------~--~~~~ 349 (482)
.++.+|+... ....+..||+.+.+...+...... .....++. -+|.+|+. |... . ....
T Consensus 78 ~dg~l~v~~~-----~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~ 152 (296)
T 3e5z_A 78 KQGHLIACSH-----GLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPG 152 (296)
T ss_dssp TTCCEEEEET-----TTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSS
T ss_pred CCCcEEEEec-----CCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCC
Confidence 3567776642 114689999988887655321111 11122333 37789987 4311 0 1113
Q ss_pred CeEEEEeCCCCceeecCCCCCCcccceeEEE-ECCEEEEEeccCCCcccCeEEEEeCC-CCce-e--ecCCCCCCccceE
Q psy11333 350 NSIERYDPQTNQWSCDVAPTTSCRTSVGVAV-LDGFLYAVGGQDGVQCLNHVERYDPK-ENKW-S--RVAPMTTRRLGVA 424 (482)
Q Consensus 350 ~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~-~~~W-~--~~~~~~~~r~~~~ 424 (482)
..++++|+. ++.+.+......+ .+++. -++++++.+.. ...+++||+. +.+. . .+-..... .-.+
T Consensus 153 ~~l~~~~~~-g~~~~~~~~~~~~---~gi~~s~dg~~lv~~~~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~-~p~~ 222 (296)
T 3e5z_A 153 RWVFRLAPD-GTLSAPIRDRVKP---NGLAFLPSGNLLVSDTG-----DNATHRYCLNARGETEYQGVHFTVEPG-KTDG 222 (296)
T ss_dssp CEEEEECTT-SCEEEEECCCSSE---EEEEECTTSCEEEEETT-----TTEEEEEEECSSSCEEEEEEEECCSSS-CCCS
T ss_pred cEEEEECCC-CCEEEeecCCCCC---ccEEECCCCCEEEEeCC-----CCeEEEEEECCCCcCcCCCeEeeCCCC-CCCe
Confidence 479999988 5555441222222 23333 35666654432 2468888876 4444 1 11111111 1112
Q ss_pred EEE-ECCEEEEEcCCCCCCCCCeEEEEeCCCCceeec
Q psy11333 425 VAV-LGGFLYAIGGSDGQSPLNTVERFDPKLNRWTAM 460 (482)
Q Consensus 425 ~~~-~~~~i~v~GG~~~~~~~~~~~~y~~~~~~W~~~ 460 (482)
++. -+|.||+..+ +.+.+||++......+
T Consensus 223 i~~d~~G~l~v~~~-------~~v~~~~~~g~~~~~~ 252 (296)
T 3e5z_A 223 LRVDAGGLIWASAG-------DGVHVLTPDGDELGRV 252 (296)
T ss_dssp EEEBTTSCEEEEET-------TEEEEECTTSCEEEEE
T ss_pred EEECCCCCEEEEcC-------CeEEEECCCCCEEEEE
Confidence 333 3778998872 4699999985544443
No 231
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=86.90 E-value=16 Score=32.33 Aligned_cols=150 Identities=15% Similarity=0.083 Sum_probs=77.3
Q ss_pred CC-cEEEEeccccCCCCCceeEEEeCCCCCeeec-cCCCC--C-CCceeEEE-ECCEEEEEecCCC----------CCCC
Q psy11333 286 RG-EVLFAVGGWCSGDAISSVERYDPQSSDWKIV-APMSK--R-RCGVGVAV-LNDLLYAVGGHDG----------QSYL 349 (482)
Q Consensus 286 ~~-~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~-~~~~~--~-~~~~~~~~-~~~~iyv~GG~~~----------~~~~ 349 (482)
.+ +.+|+.+.. +.+++||+. .+.... ..... + ..-.+++. -++.+|+....+. ....
T Consensus 80 ~~~g~l~v~~~~------~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~ 152 (314)
T 1pjx_A 80 RDANQLFVADMR------LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKF 152 (314)
T ss_dssp SSSSEEEEEETT------TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSC
T ss_pred cCCCcEEEEECC------CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCC
Confidence 35 788887531 268999998 776554 32111 1 11223333 2678888764321 1112
Q ss_pred CeEEEEeCCCCceeecCCCCCCcccceeEEEE-----CC-EEEEEeccCCCcccCeEEEEeCC-CCceee---cCCCCCC
Q psy11333 350 NSIERYDPQTNQWSCDVAPTTSCRTSVGVAVL-----DG-FLYAVGGQDGVQCLNHVERYDPK-ENKWSR---VAPMTTR 419 (482)
Q Consensus 350 ~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~-----~~-~lyv~GG~~~~~~~~~~~~yd~~-~~~W~~---~~~~~~~ 419 (482)
..+++||+. .+.+.+......+ .+++.. ++ .+|+.... ...+.+||+. +.++.. ...++..
T Consensus 153 ~~l~~~~~~-g~~~~~~~~~~~~---~~i~~~~~~d~dg~~l~v~~~~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~ 223 (314)
T 1pjx_A 153 GSIYCFTTD-GQMIQVDTAFQFP---NGIAVRHMNDGRPYQLIVAETP-----TKKLWSYDIKGPAKIENKKVWGHIPGT 223 (314)
T ss_dssp EEEEEECTT-SCEEEEEEEESSE---EEEEEEECTTSCEEEEEEEETT-----TTEEEEEEEEETTEEEEEEEEEECCCC
T ss_pred CeEEEECCC-CCEEEeccCCCCc---ceEEEecccCCCCCEEEEEECC-----CCeEEEEECCCCCccccceEEEECCCC
Confidence 478999987 6555441111111 233333 34 57777532 2468888875 333321 1122211
Q ss_pred --ccceEEEEE-CCEEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 420 --RLGVAVAVL-GGFLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 420 --r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
.....++.- +|.+|+....+ +.+.+||+++.+
T Consensus 224 ~~~~p~~i~~d~~G~l~v~~~~~-----~~i~~~d~~~g~ 258 (314)
T 1pjx_A 224 HEGGADGMDFDEDNNLLVANWGS-----SHIEVFGPDGGQ 258 (314)
T ss_dssp SSCEEEEEEEBTTCCEEEEEETT-----TEEEEECTTCBS
T ss_pred CCCCCCceEECCCCCEEEEEcCC-----CEEEEEcCCCCc
Confidence 111223332 67888875322 468999987544
No 232
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=86.61 E-value=11 Score=33.39 Aligned_cols=148 Identities=15% Similarity=0.074 Sum_probs=78.6
Q ss_pred cEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEE-ECCEEEEEecCCCCCCCCeEEEEeCCCCceeecC
Q psy11333 288 EVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAV-LNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDV 366 (482)
Q Consensus 288 ~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 366 (482)
+.+|+++... ..+++||+.++ ....... . ....+++. -++.+|+.... ...+.+||+.+++.+.+.
T Consensus 40 ~~l~~~~~~~-----~~i~~~~~~~~-~~~~~~~-~-~~~~~l~~~~dg~l~v~~~~-----~~~i~~~d~~~g~~~~~~ 106 (296)
T 3e5z_A 40 SAVIFSDVRQ-----NRTWAWSDDGQ-LSPEMHP-S-HHQNGHCLNKQGHLIACSHG-----LRRLERQREPGGEWESIA 106 (296)
T ss_dssp TEEEEEEGGG-----TEEEEEETTSC-EEEEESS-C-SSEEEEEECTTCCEEEEETT-----TTEEEEECSTTCCEEEEE
T ss_pred CEEEEEeCCC-----CEEEEEECCCC-eEEEECC-C-CCcceeeECCCCcEEEEecC-----CCeEEEEcCCCCcEEEEe
Confidence 3478776532 46899999988 5544321 1 12233443 26788876532 246999999888877651
Q ss_pred CCCCCc---ccceeEEEECCEEEEE----eccCC--------CcccCeEEEEeCCCCceeecC-CCCCCccceEEEEE-C
Q psy11333 367 APTTSC---RTSVGVAVLDGFLYAV----GGQDG--------VQCLNHVERYDPKENKWSRVA-PMTTRRLGVAVAVL-G 429 (482)
Q Consensus 367 ~~~~~~---r~~~~~~~~~~~lyv~----GG~~~--------~~~~~~~~~yd~~~~~W~~~~-~~~~~r~~~~~~~~-~ 429 (482)
...... +....++.-+|++|+. |.... ......+++||+. .+...+. ....+ .+++.. +
T Consensus 107 ~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~---~gi~~s~d 182 (296)
T 3e5z_A 107 DSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKP---NGLAFLPS 182 (296)
T ss_dssp CEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSE---EEEEECTT
T ss_pred eccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCC---ccEEECCC
Confidence 111111 1112222346899997 43210 0112478999987 4444432 22111 223332 5
Q ss_pred CEEEEEcCCCCCCCCCeEEEEeCC-CCce
Q psy11333 430 GFLYAIGGSDGQSPLNTVERFDPK-LNRW 457 (482)
Q Consensus 430 ~~i~v~GG~~~~~~~~~~~~y~~~-~~~W 457 (482)
+++++.+..+ ..+++||+. +.+.
T Consensus 183 g~~lv~~~~~-----~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 183 GNLLVSDTGD-----NATHRYCLNARGET 206 (296)
T ss_dssp SCEEEEETTT-----TEEEEEEECSSSCE
T ss_pred CCEEEEeCCC-----CeEEEEEECCCCcC
Confidence 6666444322 468888875 3444
No 233
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=86.52 E-value=22 Score=36.12 Aligned_cols=144 Identities=14% Similarity=0.111 Sum_probs=77.2
Q ss_pred ceeEEEeCCCCCee--eccCCCCC-CCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeE
Q psy11333 303 SSVERYDPQSSDWK--IVAPMSKR-RCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGV 378 (482)
Q Consensus 303 ~~~~~~d~~~~~W~--~~~~~~~~-~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~ 378 (482)
..++.++..+..-. .+...+.. ....+.... +|+..+++..+.. ....++.+|..+..|+.+ .+..... ...
T Consensus 202 ~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~-~~~~l~~~~~~~~~~~~l-~~~~~~~--~~~ 277 (695)
T 2bkl_A 202 TTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW-SENDVYWKRPGEKDFRLL-VKGVGAK--YEV 277 (695)
T ss_dssp CEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT-TEEEEEEECTTCSSCEEE-EECSSCC--EEE
T ss_pred CEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC-CceEEEEEcCCCCceEEe-ecCCCce--EEE
Confidence 46888998877632 22222222 222233332 5554444432221 235688888877788887 3222222 222
Q ss_pred EEECCEEEEEeccCCCcccCeEEEEeCCCCc---eeecCCCCCCccceEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCC
Q psy11333 379 AVLDGFLYAVGGQDGVQCLNHVERYDPKENK---WSRVAPMTTRRLGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 379 ~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~---W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~ 455 (482)
+..+|.+|+....+. ....++.+|+.+.. |..+-+.........+...++++++.+..++ ...++.+++..+
T Consensus 278 ~~~~g~l~~~s~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg---~~~l~~~~~~g~ 352 (695)
T 2bkl_A 278 HAWKDRFYVLTDEGA--PRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDA---TSEVRVATLKGK 352 (695)
T ss_dssp EEETTEEEEEECTTC--TTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETT---EEEEEEEETTCC
T ss_pred EecCCcEEEEECCCC--CCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECC---EEEEEEEeCCCC
Confidence 235666666544321 23578999987654 8776543222222334445888888876544 246778886544
No 234
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=86.47 E-value=7.3 Score=35.00 Aligned_cols=151 Identities=7% Similarity=0.008 Sum_probs=72.0
Q ss_pred CcEEEEeccccCCCCCceeEEEeCC-CCCeeeccCCCCCCCceeEEEE-CCE-EEEEecCCCCCCCCeEEEEeCC--CCc
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQ-SSDWKIVAPMSKRRCGVGVAVL-NDL-LYAVGGHDGQSYLNSIERYDPQ--TNQ 361 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~-~~~W~~~~~~~~~~~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~yd~~--~~~ 361 (482)
++.+|+.++.. ..+..||.. +.++..+...+....-.+++.. ++. ||+.+. +. ..+..|+.. +++
T Consensus 4 ~~~l~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~-~~----~~v~~~~~~~~~~~ 73 (343)
T 1ri6_A 4 KQTVYIASPES-----QQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVR-PE----FRVLAYRIAPDDGA 73 (343)
T ss_dssp EEEEEEEEGGG-----TEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEET-TT----TEEEEEEECTTTCC
T ss_pred eEEEEEeCCCC-----CeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeec-CC----CeEEEEEecCCCCc
Confidence 45677775422 356777663 4455444333333333334443 454 665543 21 467777776 777
Q ss_pred eeecCCCCCCcccceeEEE-ECCE-EEEEeccCCCcccCeEEEEeCCCC-ceeecCCCCCCccceEEEEE-CC-EEEEEc
Q psy11333 362 WSCDVAPTTSCRTSVGVAV-LDGF-LYAVGGQDGVQCLNHVERYDPKEN-KWSRVAPMTTRRLGVAVAVL-GG-FLYAIG 436 (482)
Q Consensus 362 W~~~~~~~~~~r~~~~~~~-~~~~-lyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~r~~~~~~~~-~~-~i~v~G 436 (482)
++.+ ...+.+.....++. -+++ +|+.+..+ ..+..||+... ....+...+.......++.. ++ .+|+.+
T Consensus 74 ~~~~-~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 147 (343)
T 1ri6_A 74 LTFA-AESALPGSLTHISTDHQGQFVFVGSYNA-----GNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPA 147 (343)
T ss_dssp EEEE-EEEECSSCCSEEEECTTSSEEEEEETTT-----TEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEE
T ss_pred eeec-cccccCCCCcEEEEcCCCCEEEEEecCC-----CeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEec
Confidence 7755 22221112222332 2444 66554322 35777777322 22222222222222233333 44 577765
Q ss_pred CCCCCCCCCeEEEEeCCC-Ccee
Q psy11333 437 GSDGQSPLNTVERFDPKL-NRWT 458 (482)
Q Consensus 437 G~~~~~~~~~~~~y~~~~-~~W~ 458 (482)
..+ ..+.+||..+ .++.
T Consensus 148 ~~~-----~~v~~~d~~~~~~~~ 165 (343)
T 1ri6_A 148 LKQ-----DRICLFTVSDDGHLV 165 (343)
T ss_dssp GGG-----TEEEEEEECTTSCEE
T ss_pred CCC-----CEEEEEEecCCCcee
Confidence 332 4688888876 5554
No 235
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=86.42 E-value=7.1 Score=39.09 Aligned_cols=120 Identities=14% Similarity=0.158 Sum_probs=69.2
Q ss_pred eEEEECCEEEEEecCCCCCCCCeEEEEeC-CCCc--eeecCCCCCCc--------ccceeEEE--ECCE----EEEEecc
Q psy11333 329 GVAVLNDLLYAVGGHDGQSYLNSIERYDP-QTNQ--WSCDVAPTTSC--------RTSVGVAV--LDGF----LYAVGGQ 391 (482)
Q Consensus 329 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~-~~~~--W~~~~~~~~~~--------r~~~~~~~--~~~~----lyv~GG~ 391 (482)
+-++.++.||+.+.. ...++++|. .+.+ |+.- ...+.. ....+.++ .+++ ||+...
T Consensus 57 tP~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~lW~~~-~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~- 129 (599)
T 1w6s_A 57 APLVVDGKMYIHTSF-----PNNTFALGLDDPGTILWQDK-PKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL- 129 (599)
T ss_dssp CCEEETTEEEEECST-----TTCEEEEETTCTTSEEEEEC-CCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-
T ss_pred ccEEECCEEEEEeCC-----CCEEEEEeCCCCCcEEEEEC-CCCCccccccccccccccceEEEecCCcceeEEEEEcC-
Confidence 345679999998752 236899999 7775 9865 332211 11223455 5777 887643
Q ss_pred CCCcccCeEEEEeCCCC--ceeecCCCCCC--ccceEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCCc--eeec
Q psy11333 392 DGVQCLNHVERYDPKEN--KWSRVAPMTTR--RLGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLNR--WTAM 460 (482)
Q Consensus 392 ~~~~~~~~~~~yd~~~~--~W~~~~~~~~~--r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~~--W~~~ 460 (482)
-..+.++|..|. .|+.-..-+.. ....+-++.++.+|+-++.........++.||.++.+ |+.-
T Consensus 130 -----dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 130 -----DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp -----TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred -----CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 146889998766 48753221111 1122334568888775432111123579999998654 7653
No 236
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=86.22 E-value=12 Score=40.57 Aligned_cols=157 Identities=15% Similarity=0.114 Sum_probs=92.0
Q ss_pred CCCCceeEEEECCEEEEEecCCCCCCCCeEEEEeCCCCcee-ecCC---CCCCcccceeEEEE---CCEEEEEeccCCCc
Q psy11333 323 KRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWS-CDVA---PTTSCRTSVGVAVL---DGFLYAVGGQDGVQ 395 (482)
Q Consensus 323 ~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~---~~~~~r~~~~~~~~---~~~lyv~GG~~~~~ 395 (482)
..-.++++....+.+ ++|+.....+...++.|++..+.|- .... .+.....++++++- ++..+|+|.-. ..
T Consensus 332 ~~q~GfSa~~t~d~~-~~GapG~~~w~G~v~~~~~~~~~~~~~~~~~~~~~~~sylGySVa~~~~~g~~~~v~GAP~-~~ 409 (1095)
T 3k6s_A 332 MAQEGFSAVFTPDGP-VLGAVGSFTWSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAPR-YQ 409 (1095)
T ss_dssp BCCTTSSEECCTTCC-EEEESCSTTTTBEEEECCSSSCCEEECCCSSCCCCCSCCBTSSEECCCCSSSCEEEEEETT-GG
T ss_pred cccccccceecCCcc-eEcccccCCccceeEEecCCCcceeeccccccccccccccceeeEEeccCCceEEEEEccc-cc
Confidence 444567777765555 8888776667778888988765543 2211 12222334555442 23456776432 12
Q ss_pred ccCeEEEEeCCCCceeecCCC----CCCccceEEEEEC----C--EEEEEcCCCC--CCCCCeEEEEeCCC--CceeecC
Q psy11333 396 CLNHVERYDPKENKWSRVAPM----TTRRLGVAVAVLG----G--FLYAIGGSDG--QSPLNTVERFDPKL--NRWTAMA 461 (482)
Q Consensus 396 ~~~~~~~yd~~~~~W~~~~~~----~~~r~~~~~~~~~----~--~i~v~GG~~~--~~~~~~~~~y~~~~--~~W~~~~ 461 (482)
..-.++.|......|.....+ ....+++++++.+ | -++++|.-.. ......+++|.-.. ..|....
T Consensus 410 ~~G~V~i~~~~~~~~~~~~~~~g~~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~~~~G~Vyvy~~~~~~~~~~~~~ 489 (1095)
T 3k6s_A 410 HTGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDA 489 (1095)
T ss_dssp GTCEEEEEECCTTTCCEEEEECCSSTTSCTTSCEEEECSSSSSSCCEEEEECSSCCSSCCCBCEEEEECCSSTTCCCSCS
T ss_pred ccceEEEEEecCCcceEEeecccCcccCcCCceEEEEEeCCCCCccEEEECCccccCcCCCCEEEEEEeCCCCcceeeeE
Confidence 345788888777788775422 2235566676642 2 4777774311 12345688886543 4587533
Q ss_pred CC------CcCCCceeEEEEcCCCCC
Q psy11333 462 PM------STRRKHLGCAVFVGDNGA 481 (482)
Q Consensus 462 ~~------~~~r~~~~~~~~~~~~~~ 481 (482)
.+ +..|++.+++++++-+||
T Consensus 490 ~l~g~~~~~~~~FG~sva~~gD~NgD 515 (1095)
T 3k6s_A 490 VLYGEQGHPWGRFGAALTVLGDVNGD 515 (1095)
T ss_dssp SCCCCCSCSSCCBTSCEEEEECSSSS
T ss_pred EeecccCCccccCccceEeecccCCC
Confidence 22 357888899988887776
No 237
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=86.19 E-value=21 Score=33.02 Aligned_cols=151 Identities=17% Similarity=0.135 Sum_probs=76.8
Q ss_pred EEEEeccccCC-----CCCceeEEEeCCCCCee-eccCCCCCCCceeEEE-ECCEEEEEecCCCCCCCCeEEEEeCCCC-
Q psy11333 289 VLFAVGGWCSG-----DAISSVERYDPQSSDWK-IVAPMSKRRCGVGVAV-LNDLLYAVGGHDGQSYLNSIERYDPQTN- 360 (482)
Q Consensus 289 ~l~~~GG~~~~-----~~~~~~~~~d~~~~~W~-~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~- 360 (482)
.+++.|...+. ..-..+..||..+..-. .+........-.+++. -++.+++.|+.+ ..+..||..+.
T Consensus 26 ~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~v~vw~~~~~~ 100 (416)
T 2pm9_A 26 PLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDN-----GSLELYSTNEAN 100 (416)
T ss_dssp CEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESS-----SCEEEECCSSTT
T ss_pred CEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccC-----CeEEEeeccccc
Confidence 36677643221 22246788888776432 2222222222222222 266677777754 36889998872
Q ss_pred ----ceeecCCCCCCcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCc------ee-ecCCC-CCCccceEEE
Q psy11333 361 ----QWSCDVAPTTSCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENK------WS-RVAPM-TTRRLGVAVA 426 (482)
Q Consensus 361 ----~W~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~------W~-~~~~~-~~~r~~~~~~ 426 (482)
.-..+ .....+ -.++... ++.+++.|+.++ .+..||..+.+ -. .+... .......+++
T Consensus 101 ~~~~~~~~~-~~h~~~--v~~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 172 (416)
T 2pm9_A 101 NAINSMARF-SNHSSS--VKTVKFNAKQDNVLASGGNNG-----EIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLA 172 (416)
T ss_dssp SCCCEEEEC-CCSSSC--CCEEEECSSSTTBEEEECSSS-----CEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEE
T ss_pred ccccchhhc-cCCccc--eEEEEEcCCCCCEEEEEcCCC-----eEEEEECCCCccccccccccccccccCCCCCeeEEE
Confidence 22222 111111 1222322 367788887543 57788887664 11 11111 1222223333
Q ss_pred EE-C-CEEEEEcCCCCCCCCCeEEEEeCCCCce
Q psy11333 427 VL-G-GFLYAIGGSDGQSPLNTVERFDPKLNRW 457 (482)
Q Consensus 427 ~~-~-~~i~v~GG~~~~~~~~~~~~y~~~~~~W 457 (482)
.. + +.+++.|+.++ .+.+||..+.+.
T Consensus 173 ~~~~~~~~l~~~~~dg-----~v~iwd~~~~~~ 200 (416)
T 2pm9_A 173 WNQSLAHVFASAGSSN-----FASIWDLKAKKE 200 (416)
T ss_dssp ECSSCTTEEEEESSSS-----CEEEEETTTTEE
T ss_pred eCCCCCcEEEEEcCCC-----CEEEEECCCCCc
Confidence 33 3 57888887653 588888876653
No 238
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=86.01 E-value=9.4 Score=37.80 Aligned_cols=143 Identities=16% Similarity=0.104 Sum_probs=75.5
Q ss_pred EEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCC---ce-eEEEE-C-CEEEEEecCCCCCCCCeEEEEeCCCCcee
Q psy11333 290 LFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRC---GV-GVAVL-N-DLLYAVGGHDGQSYLNSIERYDPQTNQWS 363 (482)
Q Consensus 290 l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~---~~-~~~~~-~-~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 363 (482)
+++.|+.. ..+..||..+.+-.. .+..... .. +++.. + +..++.|+.++ .+.+||..+.+..
T Consensus 175 ~l~~~~~d-----~~v~vwd~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~~ 242 (615)
T 1pgu_A 175 RSMTVGDD-----GSVVFYQGPPFKFSA--SDRTHHKQGSFVRDVEFSPDSGEFVITVGSDR-----KISCFDGKSGEFL 242 (615)
T ss_dssp EEEEEETT-----TEEEEEETTTBEEEE--EECSSSCTTCCEEEEEECSTTCCEEEEEETTC-----CEEEEETTTCCEE
T ss_pred EEEEEeCC-----CcEEEEeCCCcceee--eecccCCCCceEEEEEECCCCCCEEEEEeCCC-----eEEEEECCCCCEe
Confidence 55555532 467788876654322 2221111 22 22332 5 67777787653 6899999887754
Q ss_pred ecCCCC--CCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCC---CCccceEEEEECCEEEEEcCC
Q psy11333 364 CDVAPT--TSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMT---TRRLGVAVAVLGGFLYAIGGS 438 (482)
Q Consensus 364 ~~~~~~--~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~---~~r~~~~~~~~~~~i~v~GG~ 438 (482)
...... .....-.++...++..++.|+.+ ..+..||..+.+....-..+ ......++...++..++.|+.
T Consensus 243 ~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 317 (615)
T 1pgu_A 243 KYIEDDQEPVQGGIFALSWLDSQKFATVGAD-----ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSL 317 (615)
T ss_dssp EECCBTTBCCCSCEEEEEESSSSEEEEEETT-----SEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEET
T ss_pred EEecccccccCCceEEEEEcCCCEEEEEcCC-----CcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEEC
Confidence 431110 11111112222278888888754 35888998876544332222 112222233336667777776
Q ss_pred CCCCCCCeEEEEeCCC
Q psy11333 439 DGQSPLNTVERFDPKL 454 (482)
Q Consensus 439 ~~~~~~~~~~~y~~~~ 454 (482)
++ .+..||..+
T Consensus 318 ~g-----~i~~~d~~~ 328 (615)
T 1pgu_A 318 DG-----TLNFYELGH 328 (615)
T ss_dssp TS-----CEEEEETTE
T ss_pred CC-----CEEEEECCC
Confidence 53 578887764
No 239
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=85.96 E-value=19 Score=32.40 Aligned_cols=142 Identities=12% Similarity=0.052 Sum_probs=74.7
Q ss_pred cEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCceeec
Q psy11333 288 EVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCD 365 (482)
Q Consensus 288 ~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 365 (482)
+.+++.|+.+ ..+..||..+........+.........+.+ ++...+.|+.+ ..+..||..+.+....
T Consensus 54 g~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~ 123 (368)
T 3mmy_A 54 GNFLIAGSWA-----NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD-----KTAKMWDLSSNQAIQI 123 (368)
T ss_dssp SEEEEEEETT-----SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEE
T ss_pred ceEEEEECCC-----CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC-----CcEEEEEcCCCCceee
Confidence 4677777643 3577788776333221111111112222222 66677777755 3789999998876554
Q ss_pred CCCCCCcccceeEE---EECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEECCEEEEEcCCCCCC
Q psy11333 366 VAPTTSCRTSVGVA---VLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVLGGFLYAIGGSDGQS 442 (482)
Q Consensus 366 ~~~~~~~r~~~~~~---~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~ 442 (482)
.....+. .++. .-++.+++.|+.++ .+..||..+.+-...-. .+....+.....+.+++.++.
T Consensus 124 -~~~~~~v--~~~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---- 189 (368)
T 3mmy_A 124 -AQHDAPV--KTIHWIKAPNYSCVMTGSWDK-----TLKFWDTRSSNPMMVLQ--LPERCYCADVIYPMAVVATAE---- 189 (368)
T ss_dssp -EECSSCE--EEEEEEECSSCEEEEEEETTS-----EEEEECSSCSSCSEEEE--CSSCEEEEEEETTEEEEEEGG----
T ss_pred -ccccCce--EEEEEEeCCCCCEEEEccCCC-----cEEEEECCCCcEEEEEe--cCCCceEEEecCCeeEEEeCC----
Confidence 2222121 2222 23677788887643 58889987664322212 222333444445555554432
Q ss_pred CCCeEEEEeCCCC
Q psy11333 443 PLNTVERFDPKLN 455 (482)
Q Consensus 443 ~~~~~~~y~~~~~ 455 (482)
..+..||....
T Consensus 190 --~~i~~~~~~~~ 200 (368)
T 3mmy_A 190 --RGLIVYQLENQ 200 (368)
T ss_dssp --GCEEEEECSSS
T ss_pred --CcEEEEEeccc
Confidence 35777777543
No 240
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=85.70 E-value=15 Score=30.87 Aligned_cols=100 Identities=17% Similarity=0.194 Sum_probs=57.2
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCe---eeccCCCCCC--CceeEEEE---CCEEEEEecCCCCCCCCeEEEEeCC
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDW---KIVAPMSKRR--CGVGVAVL---NDLLYAVGGHDGQSYLNSIERYDPQ 358 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W---~~~~~~~~~~--~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~ 358 (482)
++++|++-| +.+|+|+..+-.- ..+..+..|. ...-+|+. ++++|++-| +..++||..
T Consensus 79 ~~~iyfFkG-------~~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~ 144 (207)
T 1pex_A 79 HDLIFIFRG-------RKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYDDT 144 (207)
T ss_dssp TTEEEEEET-------TEEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEETT
T ss_pred CCcEEEEcc-------CEEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC-------CEEEEEeCc
Confidence 589999987 4678887432211 1222221222 23334443 489999988 568999987
Q ss_pred CCceeecC--------CCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCc
Q psy11333 359 TNQWSCDV--------APTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENK 409 (482)
Q Consensus 359 ~~~W~~~~--------~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~ 409 (482)
+++=..-. +.+|. .--++...+|++|.+-| +..++||..+.+
T Consensus 145 ~~~~d~gyPr~i~~~~~Gip~--~iDaAf~~~g~~YfFkg-------~~y~rf~~~~~~ 194 (207)
T 1pex_A 145 NHIMDKDYPRLIEEDFPGIGD--KVDAVYEKNGYIYFFNG-------PIQFEYSIWSNR 194 (207)
T ss_dssp TTEECSSCCCBHHHHSTTSCS--CCSEEEEETTEEEEEET-------TEEEEEETTTTE
T ss_pred CccccCCCCccHHHcCCCCCC--CccEEEEcCCcEEEEEC-------CEEEEEeCCccE
Confidence 65311000 11221 12234456899999977 467888887654
No 241
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=85.70 E-value=9.8 Score=34.17 Aligned_cols=144 Identities=12% Similarity=0.068 Sum_probs=74.0
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCC----eeeccCCCCCCCceeEEE-ECCE-EEEEecCCCCCCCCeEEEEeC-CC
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSD----WKIVAPMSKRRCGVGVAV-LNDL-LYAVGGHDGQSYLNSIERYDP-QT 359 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~----W~~~~~~~~~~~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~yd~-~~ 359 (482)
++.+++.|+.. ..+..||..+.. ..... .....-.+++. -++. .++.|+.+ ..+..||. .+
T Consensus 22 ~~~~l~~~~~d-----~~v~iw~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~ 89 (342)
T 1yfq_A 22 SKSLLLITSWD-----GSLTVYKFDIQAKNVDLLQSL--RYKHPLLCCNFIDNTDLQIYVGTVQ-----GEILKVDLIGS 89 (342)
T ss_dssp GGTEEEEEETT-----SEEEEEEEETTTTEEEEEEEE--ECSSCEEEEEEEESSSEEEEEEETT-----SCEEEECSSSS
T ss_pred CCCEEEEEcCC-----CeEEEEEeCCCCccccceeee--ecCCceEEEEECCCCCcEEEEEcCC-----CeEEEEEeccC
Confidence 34555555532 356777766655 22221 11122223333 2677 77777755 36899999 88
Q ss_pred CceeecCCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCc-------eeecCCCCCCccceEEEEECCEE
Q psy11333 360 NQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENK-------WSRVAPMTTRRLGVAVAVLGGFL 432 (482)
Q Consensus 360 ~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~-------W~~~~~~~~~r~~~~~~~~~~~i 432 (482)
.+...+ ...+....-.++....+..++.|+.+ ..+..||+.+.. ...+..+..+....++....+.
T Consensus 90 ~~~~~~-~~~~~~~~v~~l~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~- 162 (342)
T 1yfq_A 90 PSFQAL-TNNEANLGICRICKYGDDKLIAASWD-----GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR- 162 (342)
T ss_dssp SSEEEC-BSCCCCSCEEEEEEETTTEEEEEETT-----SEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE-
T ss_pred CceEec-cccCCCCceEEEEeCCCCEEEEEcCC-----CeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc-
Confidence 876655 32111111123333326666677654 357778765400 2223333333333444444555
Q ss_pred EEEcCCCCCCCCCeEEEEeCCC
Q psy11333 433 YAIGGSDGQSPLNTVERFDPKL 454 (482)
Q Consensus 433 ~v~GG~~~~~~~~~~~~y~~~~ 454 (482)
++.|+.+ ..+.+||..+
T Consensus 163 l~~~~~d-----~~i~i~d~~~ 179 (342)
T 1yfq_A 163 LIVGMNN-----SQVQWFRLPL 179 (342)
T ss_dssp EEEEEST-----TEEEEEESSC
T ss_pred EEEEeCC-----CeEEEEECCc
Confidence 5555544 4688888876
No 242
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=85.53 E-value=5.1 Score=37.06 Aligned_cols=150 Identities=14% Similarity=0.001 Sum_probs=72.7
Q ss_pred CceeEEEeCCCCCeeeccCCCCCCCceeEEE-ECCE-EEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcc-----c
Q psy11333 302 ISSVERYDPQSSDWKIVAPMSKRRCGVGVAV-LNDL-LYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCR-----T 374 (482)
Q Consensus 302 ~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r-----~ 374 (482)
...++.+|+.+.....+............+. -+|+ |+..+...+ .....++.||+.+++-+.+ ...+... .
T Consensus 215 ~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~d~~~g~~~~l-~~~~~~~~~~~~~ 292 (388)
T 3pe7_A 215 DARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKG-SPDRFIYSADPETLENRQL-TSMPACSHLMSNY 292 (388)
T ss_dssp SCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETT-CCCEEEEEECTTTCCEEEE-EEECCEEEEEECT
T ss_pred cceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCC-CCcceEEEEecCCCceEEE-EcCCCceeeeecC
Confidence 4578999998877666544221111111122 2554 544433221 1123599999999887665 3222200 0
Q ss_pred ceeEEEECC-EEEEEe----ccCCCcccCeEEEEeCCCCceeecCCCCCC----------ccceEEEEECC-EEEEEcCC
Q psy11333 375 SVGVAVLDG-FLYAVG----GQDGVQCLNHVERYDPKENKWSRVAPMTTR----------RLGVAVAVLGG-FLYAIGGS 438 (482)
Q Consensus 375 ~~~~~~~~~-~lyv~G----G~~~~~~~~~~~~yd~~~~~W~~~~~~~~~----------r~~~~~~~~~~-~i~v~GG~ 438 (482)
......-+| .|++.. |... .....++.+|+.+.+-..+...+.+ ........-+| .|++....
T Consensus 293 ~~~~~spdg~~l~~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~ 371 (388)
T 3pe7_A 293 DGSLMVGDGSDAPVDVQDDSGYKI-ENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDV 371 (388)
T ss_dssp TSSEEEEEECCC-------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT
T ss_pred CCCeEccCCCcceeEeeecccccc-CCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecC
Confidence 001122233 333321 1110 1135789999998877666533220 11112222355 56655544
Q ss_pred CCCCCCCeEEEEeCCCCce
Q psy11333 439 DGQSPLNTVERFDPKLNRW 457 (482)
Q Consensus 439 ~~~~~~~~~~~y~~~~~~W 457 (482)
++ ...++.+|.....|
T Consensus 372 ~g---~~~l~~~~l~~~~~ 387 (388)
T 3pe7_A 372 HG---KPALYLATLPESVW 387 (388)
T ss_dssp TS---SCEEEEEECCGGGG
T ss_pred CC---ceeEEEEECChhcc
Confidence 43 25689999887766
No 243
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=85.49 E-value=19 Score=31.88 Aligned_cols=141 Identities=15% Similarity=0.054 Sum_probs=74.9
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceeec
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCD 365 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 365 (482)
++.+|+.+.. ...+++||+.++....... + ..-.+++.. ++.+|+..+ +.+.+||+.+++++.+
T Consensus 24 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~-~--~~~~~i~~~~dG~l~v~~~-------~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 24 SNSLLFVDIP-----AKKVCRWDSFTKQVQRVTM-D--APVSSVALRQSGGYVATIG-------TKFCALNWKEQSAVVL 88 (297)
T ss_dssp TTEEEEEETT-----TTEEEEEETTTCCEEEEEC-S--SCEEEEEEBTTSSEEEEET-------TEEEEEETTTTEEEEE
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEeC-C--CceEEEEECCCCCEEEEEC-------CeEEEEECCCCcEEEE
Confidence 4678877542 2578999999887643322 1 112233333 667666532 4699999999998866
Q ss_pred CCCCC----CcccceeEEEECCEEEEEeccCCC------cccCeEEEEeCCCCceeecC-CCCCCccceEEEEE-CC-EE
Q psy11333 366 VAPTT----SCRTSVGVAVLDGFLYAVGGQDGV------QCLNHVERYDPKENKWSRVA-PMTTRRLGVAVAVL-GG-FL 432 (482)
Q Consensus 366 ~~~~~----~~r~~~~~~~~~~~lyv~GG~~~~------~~~~~~~~yd~~~~~W~~~~-~~~~~r~~~~~~~~-~~-~i 432 (482)
.... ..+.....+.-+|++|+..-.... .....++++|+.. +...+. .+..| .+++.. ++ .+
T Consensus 89 -~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~p---ngi~~spdg~~l 163 (297)
T 3g4e_A 89 -ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDIS---NGLDWSLDHKIF 163 (297)
T ss_dssp -EECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESBE---EEEEECTTSCEE
T ss_pred -EecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeeccccc---cceEEcCCCCEE
Confidence 2221 122222222336888875321110 1234688888753 332221 11111 223333 34 58
Q ss_pred EEEcCCCCCCCCCeEEEEeC
Q psy11333 433 YAIGGSDGQSPLNTVERFDP 452 (482)
Q Consensus 433 ~v~GG~~~~~~~~~~~~y~~ 452 (482)
|+....+ +.+++||.
T Consensus 164 yv~~~~~-----~~i~~~~~ 178 (297)
T 3g4e_A 164 YYIDSLS-----YSVDAFDY 178 (297)
T ss_dssp EEEEGGG-----TEEEEEEE
T ss_pred EEecCCC-----CcEEEEec
Confidence 8776432 46788875
No 244
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=85.43 E-value=5.6 Score=39.34 Aligned_cols=150 Identities=15% Similarity=0.018 Sum_probs=74.3
Q ss_pred CcEEEEeccccCCCCCceeEEEeC--CCCCeeeccCCCCCCCceeEEEE-----CCEEEEEecCCCCCCCCeEEEEeCCC
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDP--QSSDWKIVAPMSKRRCGVGVAVL-----NDLLYAVGGHDGQSYLNSIERYDPQT 359 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~--~~~~W~~~~~~~~~~~~~~~~~~-----~~~iyv~GG~~~~~~~~~~~~yd~~~ 359 (482)
++.+|+.+. . ..+..||+ .+.+- +..++....-.+++.. +++..+++++. ..++.+||..+
T Consensus 190 g~~l~v~~~----d--~~V~v~D~~~~t~~~--~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~----~~~v~v~D~~t 257 (543)
T 1nir_A 190 GRYLLVIGR----D--ARIDMIDLWAKEPTK--VAEIKIGIEARSVESSKFKGYEDRYTIAGAYW----PPQFAIMDGET 257 (543)
T ss_dssp SCEEEEEET----T--SEEEEEETTSSSCEE--EEEEECCSEEEEEEECCSTTCTTTEEEEEEEE----SSEEEEEETTT
T ss_pred CCEEEEECC----C--CeEEEEECcCCCCcE--EEEEecCCCcceEEeCCCcCCCCCEEEEEEcc----CCeEEEEeccc
Confidence 456666653 1 67999999 55442 3333333333344443 45443344332 25688999887
Q ss_pred Cceeec-C-CCC--------CCcccceeEEEE-CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE
Q psy11333 360 NQWSCD-V-APT--------TSCRTSVGVAVL-DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL 428 (482)
Q Consensus 360 ~~W~~~-~-~~~--------~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~ 428 (482)
.+-... . ..+ +.+|-....... ++.+|+.+.. ...+..+|..+.+-..+..++..+..+.++..
T Consensus 258 ~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~-----~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~s 332 (543)
T 1nir_A 258 LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE-----TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWD 332 (543)
T ss_dssp CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT-----TTEEEEEECTTSSSCEEEEEECCSSCCCEEEC
T ss_pred cccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC-----CCeEEEEEecCCCcceeEEeccCcCccCceEC
Confidence 764322 1 111 111221122222 4556655432 24688888876432221122233333344433
Q ss_pred -CCE-EEEEcCCCCCCCCCeEEEEeCCCCcee
Q psy11333 429 -GGF-LYAIGGSDGQSPLNTVERFDPKLNRWT 458 (482)
Q Consensus 429 -~~~-i~v~GG~~~~~~~~~~~~y~~~~~~W~ 458 (482)
+++ +|+.+.. .+++.++|+++.+-.
T Consensus 333 pdg~~l~va~~~-----~~~v~v~D~~tg~l~ 359 (543)
T 1nir_A 333 SSHRYFMTAANN-----SNKVAVIDSKDRRLS 359 (543)
T ss_dssp TTSCEEEEEEGG-----GTEEEEEETTTTEEE
T ss_pred CCCCEEEEEecC-----CCeEEEEECCCCeEE
Confidence 555 5555432 257888999887643
No 245
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=85.40 E-value=29 Score=35.26 Aligned_cols=147 Identities=17% Similarity=0.090 Sum_probs=80.8
Q ss_pred ceeEEEeCCCC--CeeeccCCCCCCCceeEEEECCEEEEEecCCCCCCCCeEEEEeCCCC---ceeecCCCCCCccccee
Q psy11333 303 SSVERYDPQSS--DWKIVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTN---QWSCDVAPTTSCRTSVG 377 (482)
Q Consensus 303 ~~~~~~d~~~~--~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~---~W~~~~~~~~~~r~~~~ 377 (482)
+.++.+|..+. .|..+..-.... .......++.+|+....+. ....++.+|..+. .|+.+.+.... . . +
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~-~~~~~~~g~~l~~~t~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~~-~-~-~ 332 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDAD-VSLVDNKGSTLYLLTNRDA--PNRRLVTVDAANPGPAHWRDLIPERQQ-V-L-T 332 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSC-EEEEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGGCEEEECCCSS-C-E-E
T ss_pred cEEEEEECCCCCCceEEEeCCCCce-EEEEeccCCEEEEEECCCC--CCCEEEEEeCCCCCccccEEEecCCCC-E-E-E
Confidence 58899998765 676654422211 1123345889999876543 2357899998764 48877232222 1 2 4
Q ss_pred EEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEE-EC-CEEEEEc-CCCCCCCCCeEEEEeCCC
Q psy11333 378 VAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAV-LG-GFLYAIG-GSDGQSPLNTVERFDPKL 454 (482)
Q Consensus 378 ~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~-~~i~v~G-G~~~~~~~~~~~~y~~~~ 454 (482)
....++.|++..-.++ ...++.+|+.+.....+. +|.......... .+ +.+++.. +.. .-..++.||..+
T Consensus 333 ~s~~g~~lv~~~~~~g---~~~l~~~d~~g~~~~~l~-~p~~~~~~~~~~~~d~~~l~~~~ss~~---tP~~l~~~d~~~ 405 (693)
T 3iuj_A 333 VHSGSGYLFAEYMVDA---TARVEQFDYEGKRVREVA-LPGLGSVSGFNGKHDDPALYFGFENYA---QPPTLYRFEPKS 405 (693)
T ss_dssp EEEETTEEEEEEEETT---EEEEEEECTTSCEEEEEC-CSSSSEEEECCCCTTCSCEEEEEECSS---SCCEEEEECTTT
T ss_pred EEEECCEEEEEEEECC---eeEEEEEECCCCeeEEee-cCCCceEEeeecCCCCCEEEEEecCCC---CCCEEEEEECCC
Confidence 4555677766544333 246888998765544443 332221111111 12 3444432 222 225789999888
Q ss_pred CceeecCC
Q psy11333 455 NRWTAMAP 462 (482)
Q Consensus 455 ~~W~~~~~ 462 (482)
.+++.+..
T Consensus 406 g~~~~l~~ 413 (693)
T 3iuj_A 406 GAISLYRA 413 (693)
T ss_dssp CCEEEEEC
T ss_pred CeEEEEEe
Confidence 87776643
No 246
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=85.06 E-value=19 Score=37.04 Aligned_cols=169 Identities=18% Similarity=0.150 Sum_probs=87.0
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCC---------CCCCeEEEEe
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQ---------SYLNSIERYD 356 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~---------~~~~~~~~yd 356 (482)
+++..+++...++.-...++.+|..+++..... .+.... .+.+-. +..||+ +..+.. .....++.++
T Consensus 173 DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~-~~~~wspD~~l~~-~~~~~~~~~~~~~~~~~~~~v~~~~ 249 (741)
T 1yr2_A 173 DGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKF-SGLAWLGNDALLY-SRFAEPKEGQAFQALNYNQTVWLHR 249 (741)
T ss_dssp TSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEES-CCCEESTTSEEEE-EECCCC--------CCCCCEEEEEE
T ss_pred CCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCcee-ccEEEECCCEEEE-EEecCcccccccccCCCCCEEEEEE
Confidence 455555544332332346999999999875431 111110 112222 423443 333321 1245688999
Q ss_pred CCCCcee--ecCCCCCCcccceeE-EEECCEEEEEeccCCCcccCeEEEEeCCCC--c-eeecCCCCCCccceEEEEECC
Q psy11333 357 PQTNQWS--CDVAPTTSCRTSVGV-AVLDGFLYAVGGQDGVQCLNHVERYDPKEN--K-WSRVAPMTTRRLGVAVAVLGG 430 (482)
Q Consensus 357 ~~~~~W~--~~~~~~~~~r~~~~~-~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~--~-W~~~~~~~~~r~~~~~~~~~~ 430 (482)
..+..-. .+......+....+. ..-+|+..++....+....+.++.+|..+. . |..+......... .+..-++
T Consensus 250 lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~-~~~~dg~ 328 (741)
T 1yr2_A 250 LGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWD-FVDGVGD 328 (741)
T ss_dssp TTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEE-EEEEETT
T ss_pred CCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEE-EEeccCC
Confidence 8776532 221111122222222 234665444444332223468999998876 6 8877643332222 2234467
Q ss_pred EEEEEcCCCCCCCCCeEEEEeCCC--CceeecC
Q psy11333 431 FLYAIGGSDGQSPLNTVERFDPKL--NRWTAMA 461 (482)
Q Consensus 431 ~i~v~GG~~~~~~~~~~~~y~~~~--~~W~~~~ 461 (482)
.||+....++ ....++.+|..+ ..|+.+.
T Consensus 329 ~l~~~s~~~~--~~~~l~~~d~~~~~~~~~~l~ 359 (741)
T 1yr2_A 329 QLWFVSGDGA--PLKKIVRVDLSGSTPRFDTVV 359 (741)
T ss_dssp EEEEEECTTC--TTCEEEEEECSSSSCEEEEEE
T ss_pred EEEEEECCCC--CCCEEEEEeCCCCccccEEEe
Confidence 7888765432 236799999877 5788764
No 247
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=85.00 E-value=23 Score=32.48 Aligned_cols=150 Identities=11% Similarity=0.015 Sum_probs=77.1
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEE--EECCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVA--VLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
++.+++.|+. +.+..++..+..................+ .-++..++.++.++.. ...+..||.....+..
T Consensus 187 dg~~l~s~s~------~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~-~~~i~~~~~~~~~~~~ 259 (365)
T 4h5i_A 187 DGKVVAYITG------SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGK-GIVLTKISIKSGNTSV 259 (365)
T ss_dssp TSSEEEEECS------SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSC-CEEEEEEEEETTEEEE
T ss_pred CCceEEeccc------eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcc-eeEEeecccccceecc
Confidence 4555555542 34566777666553322222111112222 2378888887755422 2246677777666543
Q ss_pred cC-CCCCCcccc-eeEE-EECCEEEEEeccCCCcccCeEEEEeCCCCceee-cCCCCCCccceEEEEE-CCEEEEEcCCC
Q psy11333 365 DV-APTTSCRTS-VGVA-VLDGFLYAVGGQDGVQCLNHVERYDPKENKWSR-VAPMTTRRLGVAVAVL-GGFLYAIGGSD 439 (482)
Q Consensus 365 ~~-~~~~~~r~~-~~~~-~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~r~~~~~~~~-~~~i~v~GG~~ 439 (482)
.. ..+...... .+++ .-+|++++.|+.++ .+..||..+.+-.. +..- ......+++.. ++++++.|+.+
T Consensus 260 ~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~-----~V~iwd~~~~~~~~~~~~g-H~~~V~~v~fSpdg~~laS~S~D 333 (365)
T 4h5i_A 260 LRSKQVTNRFKGITSMDVDMKGELAVLASNDN-----SIALVKLKDLSMSKIFKQA-HSFAITEVTISPDSTYVASVSAA 333 (365)
T ss_dssp EEEEEEESSCSCEEEEEECTTSCEEEEEETTS-----CEEEEETTTTEEEEEETTS-SSSCEEEEEECTTSCEEEEEETT
T ss_pred eeeeeecCCCCCeEeEEECCCCCceEEEcCCC-----EEEEEECCCCcEEEEecCc-ccCCEEEEEECCCCCEEEEEeCC
Confidence 20 111111111 1222 23788899988653 58889988765322 1111 11112223332 78888888776
Q ss_pred CCCCCCeEEEEeCCC
Q psy11333 440 GQSPLNTVERFDPKL 454 (482)
Q Consensus 440 ~~~~~~~~~~y~~~~ 454 (482)
+++.+||...
T Consensus 334 -----~tvrvw~ip~ 343 (365)
T 4h5i_A 334 -----NTIHIIKLPL 343 (365)
T ss_dssp -----SEEEEEECCT
T ss_pred -----CeEEEEEcCC
Confidence 4788998753
No 248
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=84.82 E-value=12 Score=41.18 Aligned_cols=133 Identities=10% Similarity=0.017 Sum_probs=69.3
Q ss_pred eeEEEeCCCCCeeeccCCCCCCCceeEEE-ECCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEEC
Q psy11333 304 SVERYDPQSSDWKIVAPMSKRRCGVGVAV-LNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLD 382 (482)
Q Consensus 304 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~ 382 (482)
.+..||..+.+........... -.+++. -++...+.||.+ ..+..||..+++.... .... ..-.++....
T Consensus 984 ~i~i~d~~~~~~~~~~~~h~~~-v~~l~~s~dg~~l~s~~~d-----g~i~vwd~~~~~~~~~-~~~~--~~v~~~~~~~ 1054 (1249)
T 3sfz_A 984 AIKIIELPNNRVFSSGVGHKKA-VRHIQFTADGKTLISSSED-----SVIQVWNWQTGDYVFL-QAHQ--ETVKDFRLLQ 1054 (1249)
T ss_dssp CCEEEETTTTSCEEECCCCSSC-CCCEEECSSSSCEEEECSS-----SBEEEEETTTTEEECC-BCCS--SCEEEEEECS
T ss_pred CEEEEEcCCCceeeecccCCCc-eEEEEECCCCCEEEEEcCC-----CEEEEEECCCCceEEE-ecCC--CcEEEEEEcC
Confidence 4677777766543221111111 112222 366777777755 3689999999877654 2221 1122333333
Q ss_pred CEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCC
Q psy11333 383 GFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 383 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~ 455 (482)
+..++.|+.+ ..+..||..+.+-...-..........+..-++..++.|+.++ .+.+||..+.
T Consensus 1055 ~~~l~~~~~d-----g~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~-----~v~iwd~~~~ 1117 (1249)
T 3sfz_A 1055 DSRLLSWSFD-----GTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADK-----TAKIWSFDLL 1117 (1249)
T ss_dssp SSEEEEEESS-----SEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSS-----CCCEECSSSS
T ss_pred CCcEEEEECC-----CcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCC-----cEEEEECCCc
Confidence 4445566643 3588899877653322111222222223333677777877653 4677776544
No 249
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=84.52 E-value=10 Score=33.85 Aligned_cols=157 Identities=15% Similarity=0.152 Sum_probs=79.1
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCC---CCceeEEE-ECCEEEEE----ecCCC--------CCCC
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKR---RCGVGVAV-LNDLLYAV----GGHDG--------QSYL 349 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~---~~~~~~~~-~~~~iyv~----GG~~~--------~~~~ 349 (482)
.++.+|+... ....+.++|+. .+...+...... ..-..+++ -+|.||+. |-... ....
T Consensus 95 ~dG~l~v~~~-----~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~ 168 (305)
T 3dr2_A 95 AQQRLVHCEH-----GRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAH 168 (305)
T ss_dssp TTSCEEEEET-----TTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSC
T ss_pred CCCCEEEEEC-----CCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCC
Confidence 3566776632 11367888886 555544321111 11123333 37889985 32110 0113
Q ss_pred CeEEEEeCCCCceeecCCCCCCcccceeEEEE-CC-EEEEEeccCCCcccCeEEEEeCCCCceee---cCCCCCCccceE
Q psy11333 350 NSIERYDPQTNQWSCDVAPTTSCRTSVGVAVL-DG-FLYAVGGQDGVQCLNHVERYDPKENKWSR---VAPMTTRRLGVA 424 (482)
Q Consensus 350 ~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~yd~~~~~W~~---~~~~~~~r~~~~ 424 (482)
..+++||+.+++++.+ ..+. ...+++.. ++ .||+............+++||+..+.... ....+... -.+
T Consensus 169 ~~v~~~d~~~g~~~~~-~~~~---~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~-pdg 243 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRM-ADLD---HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGL-PDG 243 (305)
T ss_dssp EEEEEECSSSCCCEEE-EEES---SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSC-CCS
T ss_pred CeEEEEcCCCCcEEEE-ecCC---CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCC-CCe
Confidence 5799999999888876 3111 11233332 44 48877542211112578899887554211 11111111 112
Q ss_pred EEE-ECCEEEEEcCCCCCCCCCeEEEEeCCCCceeec
Q psy11333 425 VAV-LGGFLYAIGGSDGQSPLNTVERFDPKLNRWTAM 460 (482)
Q Consensus 425 ~~~-~~~~i~v~GG~~~~~~~~~~~~y~~~~~~W~~~ 460 (482)
++. -+|.||+..+ ..+.+||++......+
T Consensus 244 i~~d~~G~lwv~~~-------~gv~~~~~~g~~~~~~ 273 (305)
T 3dr2_A 244 FCVDRGGWLWSSSG-------TGVCVFDSDGQLLGHI 273 (305)
T ss_dssp EEECTTSCEEECCS-------SEEEEECTTSCEEEEE
T ss_pred EEECCCCCEEEecC-------CcEEEECCCCCEEEEE
Confidence 222 3677887652 3599999976654444
No 250
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=84.47 E-value=20 Score=31.38 Aligned_cols=146 Identities=9% Similarity=0.091 Sum_probs=67.1
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCC-eeeccCCCCCCCceeEEEECCEEEEEecCCCCCCCCeEEEEeCCCCceeec
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSD-WKIVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCD 365 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 365 (482)
++..++.|+.. ..+..+|..... ......+............++..++.|+.+ ..+..||.....+...
T Consensus 70 ~~~~l~~~~~d-----g~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~ 139 (313)
T 3odt_A 70 EKELLLFGGKD-----TMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWD-----KTAKVWKEGSLVYNLQ 139 (313)
T ss_dssp TTTEEEEEETT-----SCEEEEETTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEETT-----SEEEEEETTEEEEEEE
T ss_pred CCCEEEEecCC-----CeEEEEEeeecCCCCcccchhhcccCEEEEEecCCEEEEEeCC-----CCEEEEcCCcEEEecc
Confidence 45555566532 235555554432 111222222222233334466677777755 3688898333322222
Q ss_pred CCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEECCEEEEEcCCCCCCCCC
Q psy11333 366 VAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVLGGFLYAIGGSDGQSPLN 445 (482)
Q Consensus 366 ~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~ 445 (482)
....+.........++..++.|+.++ .+..||..+.. .................-++. ++.|+.+ .
T Consensus 140 --~~~~~v~~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~-~~~~~~~~~~i~~~~~~~~~~-~~~~~~d-----g 205 (313)
T 3odt_A 140 --AHNASVWDAKVVSFSENKFLTASADK-----TIKLWQNDKVI-KTFSGIHNDVVRHLAVVDDGH-FISCSND-----G 205 (313)
T ss_dssp --CCSSCEEEEEEEETTTTEEEEEETTS-----CEEEEETTEEE-EEECSSCSSCEEEEEEEETTE-EEEEETT-----S
T ss_pred --cCCCceeEEEEccCCCCEEEEEECCC-----CEEEEecCceE-EEEeccCcccEEEEEEcCCCe-EEEccCC-----C
Confidence 11112111222222677777777543 47778733221 112211222222222333667 6666655 3
Q ss_pred eEEEEeCCCCc
Q psy11333 446 TVERFDPKLNR 456 (482)
Q Consensus 446 ~~~~y~~~~~~ 456 (482)
.+.+||..+.+
T Consensus 206 ~i~i~d~~~~~ 216 (313)
T 3odt_A 206 LIKLVDMHTGD 216 (313)
T ss_dssp EEEEEETTTCC
T ss_pred eEEEEECCchh
Confidence 67888876543
No 251
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=84.35 E-value=9.5 Score=34.04 Aligned_cols=152 Identities=16% Similarity=0.071 Sum_probs=76.2
Q ss_pred cEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceeecC
Q psy11333 288 EVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDV 366 (482)
Q Consensus 288 ~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 366 (482)
+.||+.+.. ...++++++. ......... . ....+.+.- +|.+|+.... ...+.+||+. ++.+.+.
T Consensus 57 ~~l~~~d~~-----~~~i~~~~~~-g~~~~~~~~-~-~~~~gl~~d~dG~l~v~~~~-----~~~v~~~~~~-g~~~~~~ 122 (305)
T 3dr2_A 57 RTLVWSDLV-----GRRVLGWRED-GTVDVLLDA-T-AFTNGNAVDAQQRLVHCEHG-----RRAITRSDAD-GQAHLLV 122 (305)
T ss_dssp TEEEEEETT-----TTEEEEEETT-SCEEEEEES-C-SCEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEE
T ss_pred CEEEEEECC-----CCEEEEEeCC-CCEEEEeCC-C-CccceeeECCCCCEEEEECC-----CCEEEEECCC-CCEEEEE
Confidence 456666532 2468888884 444333211 1 112233332 6788876421 2468899986 6666551
Q ss_pred CCCCCcc--cceeEE-EECCEEEEE----eccCC--------CcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CC
Q psy11333 367 APTTSCR--TSVGVA-VLDGFLYAV----GGQDG--------VQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GG 430 (482)
Q Consensus 367 ~~~~~~r--~~~~~~-~~~~~lyv~----GG~~~--------~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~ 430 (482)
......+ .-..++ .-+|++|+. |-... ......+++||+.+.+++.+. ... ...+++.. ++
T Consensus 123 ~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~-~p~gl~~spdg 199 (305)
T 3dr2_A 123 GRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLD-HPNGLAFSPDE 199 (305)
T ss_dssp CEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EES-SEEEEEECTTS
T ss_pred eccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCC-CCcceEEcCCC
Confidence 1111111 111233 347899986 32210 011357999999888877664 111 11223333 44
Q ss_pred -EEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 431 -FLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 431 -~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
.||+............+++|+...+.
T Consensus 200 ~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 200 QTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp SEEEEEECCC---CCCEEEEEEEETTE
T ss_pred CEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 47777543211112568888876543
No 252
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=84.33 E-value=16 Score=36.18 Aligned_cols=103 Identities=8% Similarity=-0.024 Sum_probs=57.1
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-C-CEEEEEecCCCCCCCCeEEEEeCC--CCc
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-N-DLLYAVGGHDGQSYLNSIERYDPQ--TNQ 361 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~yd~~--~~~ 361 (482)
.++.+|+... ..+.+..+|+.+++-. ..++.+..-|+++.. + ..+|+.+. ...+..||+. +.+
T Consensus 165 ~~~~~~V~~~-----~~~~V~viD~~t~~v~--~~i~~g~~p~~v~~SpDGr~lyv~~~------dg~V~viD~~~~t~~ 231 (567)
T 1qks_A 165 LENLFSVTLR-----DAGQIALIDGSTYEIK--TVLDTGYAVHISRLSASGRYLFVIGR------DGKVNMIDLWMKEPT 231 (567)
T ss_dssp GGGEEEEEET-----TTTEEEEEETTTCCEE--EEEECSSCEEEEEECTTSCEEEEEET------TSEEEEEETTSSSCC
T ss_pred CCceEEEEeC-----CCCeEEEEECCCCeEE--EEEeCCCCccceEECCCCCEEEEEcC------CCeEEEEECCCCCCc
Confidence 4577887764 2357999999988653 222333344555543 4 46777542 2479999995 443
Q ss_pred eeecCCCCCCcccceeEEEE-----CC-EEEEEeccCCCcccCeEEEEeCCCCc
Q psy11333 362 WSCDVAPTTSCRTSVGVAVL-----DG-FLYAVGGQDGVQCLNHVERYDPKENK 409 (482)
Q Consensus 362 W~~~~~~~~~~r~~~~~~~~-----~~-~lyv~GG~~~~~~~~~~~~yd~~~~~ 409 (482)
.+ ...+.+.....++.. +| .+|+..-. .+.+..+|..+.+
T Consensus 232 --~v-~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~-----~~~v~ViD~~t~~ 277 (567)
T 1qks_A 232 --TV-AEIKIGSEARSIETSKMEGWEDKYAIAGAYW-----PPQYVIMDGETLE 277 (567)
T ss_dssp --EE-EEEECCSEEEEEEECCSTTCTTTEEEEEEEE-----TTEEEEEETTTCC
T ss_pred --Ee-EEEecCCCCceeEEccccCCCCCEEEEEEcc-----CCeEEEEECCCCc
Confidence 22 222222222344444 55 56655432 2567788876543
No 253
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=84.26 E-value=15 Score=37.39 Aligned_cols=106 Identities=19% Similarity=0.132 Sum_probs=52.4
Q ss_pred CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEE--CC--EEEEEeccCCCcccCeEEEEeCCCCc
Q psy11333 334 NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVL--DG--FLYAVGGQDGVQCLNHVERYDPKENK 409 (482)
Q Consensus 334 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~--~~--~lyv~GG~~~~~~~~~~~~yd~~~~~ 409 (482)
++...+.||.+ .++.+||.....-..+.......+....++.+ ++ ..++.|+.++ .+..||..+.+
T Consensus 483 ~~~~l~s~s~D-----~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~-----~v~vwd~~~~~ 552 (694)
T 3dm0_A 483 DNRQIVSASRD-----RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDK-----TVKVWNLSNCK 552 (694)
T ss_dssp TSSCEEEEETT-----SCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTS-----CEEEEETTTCC
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCC-----eEEEEECCCCc
Confidence 56666777765 36888987655322231111112222233333 22 4667776543 57888887665
Q ss_pred eeecCCCCCCccceEEEEE-CCEEEEEcCCCCCCCCCeEEEEeCCCC
Q psy11333 410 WSRVAPMTTRRLGVAVAVL-GGFLYAIGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 410 W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~y~~~~~ 455 (482)
-...-.-.. ....+++.. ++++++.||.++ .+.+||..+.
T Consensus 553 ~~~~~~~h~-~~v~~v~~spdg~~l~sg~~Dg-----~i~iwd~~~~ 593 (694)
T 3dm0_A 553 LRSTLAGHT-GYVSTVAVSPDGSLCASGGKDG-----VVLLWDLAEG 593 (694)
T ss_dssp EEEEECCCS-SCEEEEEECTTSSEEEEEETTS-----BCEEEETTTT
T ss_pred EEEEEcCCC-CCEEEEEEeCCCCEEEEEeCCC-----eEEEEECCCC
Confidence 432211111 111222222 667777777653 3555555443
No 254
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=84.16 E-value=22 Score=31.68 Aligned_cols=125 Identities=14% Similarity=0.092 Sum_probs=72.4
Q ss_pred CeeeccCCCCCCCceeEEE-ECCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEE-CCEEEEEecc
Q psy11333 314 DWKIVAPMSKRRCGVGVAV-LNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVL-DGFLYAVGGQ 391 (482)
Q Consensus 314 ~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~ 391 (482)
..+.+..+|.+....+.++ -++.||+.... ...++++|+.+.. ... ...+ ..-++++.. +|++|+....
T Consensus 21 ~~~~~~~~p~~~~pegia~~~~g~lyv~d~~-----~~~I~~~d~~g~~-~~~-~~~~--~~p~gia~~~dG~l~vad~~ 91 (306)
T 2p4o_A 21 PAKIITSFPVNTFLENLASAPDGTIFVTNHE-----VGEIVSITPDGNQ-QIH-ATVE--GKVSGLAFTSNGDLVATGWN 91 (306)
T ss_dssp CEEEEEEECTTCCEEEEEECTTSCEEEEETT-----TTEEEEECTTCCE-EEE-EECS--SEEEEEEECTTSCEEEEEEC
T ss_pred CceEeEeCCCCCCcceEEECCCCCEEEEeCC-----CCeEEEECCCCce-EEE-EeCC--CCceeEEEcCCCcEEEEecc
Confidence 3444444554444555555 36789988632 2469999998753 322 1111 122334433 6789988642
Q ss_pred CCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCEEEEEcCCCCCCCCCeEEEEeCCCC
Q psy11333 392 DGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGFLYAIGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 392 ~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~y~~~~~ 455 (482)
.. ...+..+|+.+.+.+.+...+..+...+.+.. ++.+|+.--. ...++++|+.+.
T Consensus 92 ~~---~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~-----~g~i~~~d~~~~ 148 (306)
T 2p4o_A 92 AD---SIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSY-----RGAIWLIDVVQP 148 (306)
T ss_dssp TT---SCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETT-----TTEEEEEETTTT
T ss_pred CC---cceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECC-----CCeEEEEeCCCC
Confidence 21 12488899888888776665555554455444 4567775422 247899998754
No 255
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=84.02 E-value=7.2 Score=35.03 Aligned_cols=107 Identities=9% Similarity=0.010 Sum_probs=59.4
Q ss_pred CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEE-ECC-EEEEEeccCCCcccCeEEEEeCCCCce-
Q psy11333 334 NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAV-LDG-FLYAVGGQDGVQCLNHVERYDPKENKW- 410 (482)
Q Consensus 334 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~-~~~-~lyv~GG~~~~~~~~~~~~yd~~~~~W- 410 (482)
.+.+|+.++.+ ..+.+||+.+++.... .+.+ ....+++. -+| .+|+.+..+ ..++.||+.+.+.
T Consensus 9 ~~~~~v~~~~~-----~~v~~~d~~~~~~~~~-~~~~--~~~~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~~ 75 (331)
T 3u4y_A 9 SNFGIVVEQHL-----RRISFFSTDTLEILNQ-ITLG--YDFVDTAITSDCSNVVVTSDFC-----QTLVQIETQLEPPK 75 (331)
T ss_dssp CCEEEEEEGGG-----TEEEEEETTTCCEEEE-EECC--CCEEEEEECSSSCEEEEEESTT-----CEEEEEECSSSSCE
T ss_pred CCEEEEEecCC-----CeEEEEeCcccceeee-EEcc--CCcceEEEcCCCCEEEEEeCCC-----CeEEEEECCCCcee
Confidence 56788887643 4799999999987654 2222 11123333 245 477776532 3789999988764
Q ss_pred e-ecCCCCCCccceEEEEE-CC-EEEEEcCCCCCCCCCeEEEEeCCCCcee
Q psy11333 411 S-RVAPMTTRRLGVAVAVL-GG-FLYAIGGSDGQSPLNTVERFDPKLNRWT 458 (482)
Q Consensus 411 ~-~~~~~~~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~y~~~~~~W~ 458 (482)
. .+.....+. ++++.. ++ .+| .+...+ ....+.+||+.+.+..
T Consensus 76 ~~~~~~~~~~~--~~~~~s~dg~~l~-~~~~~~--~~~~i~v~d~~~~~~~ 121 (331)
T 3u4y_A 76 VVAIQEGQSSM--ADVDITPDDQFAV-TVTGLN--HPFNMQSYSFLKNKFI 121 (331)
T ss_dssp EEEEEECSSCC--CCEEECTTSSEEE-ECCCSS--SSCEEEEEETTTTEEE
T ss_pred EEecccCCCCc--cceEECCCCCEEE-EecCCC--CcccEEEEECCCCCeE
Confidence 2 222222222 212323 44 466 433321 1137999998876543
No 256
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=83.85 E-value=28 Score=35.87 Aligned_cols=107 Identities=14% Similarity=0.165 Sum_probs=62.8
Q ss_pred CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCC-CCCcccceeEEE-ECCEEEEEeccCCCcccCeEEEEeCCCCcee
Q psy11333 334 NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAP-TTSCRTSVGVAV-LDGFLYAVGGQDGVQCLNHVERYDPKENKWS 411 (482)
Q Consensus 334 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 411 (482)
+|.|++.||.. +-+.+||+.+++++..... +.......++.. .+|.||+.. . ..+.+||+.++++.
T Consensus 482 ~g~lWi~~~t~-----~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~------~Gl~~~~~~~~~~~ 549 (758)
T 3ott_A 482 EGNVWVLLYNN-----KGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF-H------GGVMRINPKDESQQ 549 (758)
T ss_dssp TSCEEEEETTC-----SSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE-T------TEEEEECC--CCCC
T ss_pred CCCEEEEccCC-----CCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe-c------CceEEEecCCCceE
Confidence 56788765543 3489999999999876211 111111122222 258888643 2 24889999988876
Q ss_pred ecC--CCCCCccceEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCCceeec
Q psy11333 412 RVA--PMTTRRLGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLNRWTAM 460 (482)
Q Consensus 412 ~~~--~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~~W~~~ 460 (482)
... .+|. ....++..-+|.|++... +-+.+|||++.+....
T Consensus 550 ~~~~~gl~~-~~i~~i~~~~g~lWi~t~-------~Gl~~~~~~~~~~~~~ 592 (758)
T 3ott_A 550 SISFGSFSN-NEILSMTCVKNSIWVSTT-------NGLWIIDRKTMDARQQ 592 (758)
T ss_dssp BCCCCC----CCEEEEEEETTEEEEEES-------SCEEEEETTTCCEEEC
T ss_pred EecccCCCc-cceEEEEECCCCEEEECC-------CCeEEEcCCCceeEEe
Confidence 653 3332 223344445788888763 3489999998877654
No 257
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=83.61 E-value=23 Score=31.37 Aligned_cols=107 Identities=15% Similarity=0.222 Sum_probs=54.5
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCC--CCeeeccCCCCCCCceeEEEE----CCEEEEEecCCCCCCCCeEEEEeCCCC
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQS--SDWKIVAPMSKRRCGVGVAVL----NDLLYAVGGHDGQSYLNSIERYDPQTN 360 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~--~~W~~~~~~~~~~~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~yd~~~~ 360 (482)
++.+++.|+.+ ..+..||..+ ..+.....+.........+.+ ++.+++.||.++ .+..||..+.
T Consensus 22 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg-----~v~vwd~~~~ 91 (351)
T 3f3f_A 22 YGRHVATCSSD-----QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK-----TVKLWEEDPD 91 (351)
T ss_dssp SSSEEEEEETT-----SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS-----CEEEEEECTT
T ss_pred CCCEEEEeeCC-----CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC-----eEEEEecCCC
Confidence 45566666532 2456666654 344443333222222233333 377888888653 5888888765
Q ss_pred c-------eeecCCCCCCcccceeEEEE--C--CEEEEEeccCCCcccCeEEEEeCCCCc
Q psy11333 361 Q-------WSCDVAPTTSCRTSVGVAVL--D--GFLYAVGGQDGVQCLNHVERYDPKENK 409 (482)
Q Consensus 361 ~-------W~~~~~~~~~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~yd~~~~~ 409 (482)
+ |+.+ ..+.........+.+ + +..++.|+.++ .+..||..+.+
T Consensus 92 ~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg-----~v~iwd~~~~~ 145 (351)
T 3f3f_A 92 QEECSGRRWNKL-CTLNDSKGSLYSVKFAPAHLGLKLACLGNDG-----ILRLYDALEPS 145 (351)
T ss_dssp SCTTSSCSEEEE-EEECCCSSCEEEEEECCGGGCSEEEEEETTC-----EEEEEECSSTT
T ss_pred cccccccCccee-eeecccCCceeEEEEcCCCCCcEEEEecCCC-----cEEEecCCChH
Confidence 2 3322 111111111222222 3 66777777543 57788876543
No 258
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=83.20 E-value=7.1 Score=35.43 Aligned_cols=104 Identities=14% Similarity=0.104 Sum_probs=59.1
Q ss_pred CEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccce-eEEE-ECCEEEEEeccCCCcccCeEEEEeCCCCceee
Q psy11333 335 DLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSV-GVAV-LDGFLYAVGGQDGVQCLNHVERYDPKENKWSR 412 (482)
Q Consensus 335 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 412 (482)
+...+.|+.+ ..+..||..+...... ..+....... ++.. -+++.++.|+.+ ..+..||..+.+...
T Consensus 54 g~~l~~~~~d-----g~i~iw~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~ 122 (368)
T 3mmy_A 54 GNFLIAGSWA-----NDVRCWEVQDSGQTIP-KAQQMHTGPVLDVCWSDDGSKVFTASCD-----KTAKMWDLSSNQAIQ 122 (368)
T ss_dssp SEEEEEEETT-----SEEEEEEECTTSCEEE-EEEEECSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEE
T ss_pred ceEEEEECCC-----CcEEEEEcCCCCceeE-EEeccccCCEEEEEECcCCCEEEEEcCC-----CcEEEEEcCCCCcee
Confidence 4788888765 3688999887433221 0111111111 2222 267777777754 368889998887655
Q ss_pred cCCCCCCccceEEEE---ECCEEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 413 VAPMTTRRLGVAVAV---LGGFLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 413 ~~~~~~~r~~~~~~~---~~~~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
..... ....++.. .++.+++.|+.+ ..+.+||..+.+
T Consensus 123 ~~~~~--~~v~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~ 162 (368)
T 3mmy_A 123 IAQHD--APVKTIHWIKAPNYSCVMTGSWD-----KTLKFWDTRSSN 162 (368)
T ss_dssp EEECS--SCEEEEEEEECSSCEEEEEEETT-----SEEEEECSSCSS
T ss_pred ecccc--CceEEEEEEeCCCCCEEEEccCC-----CcEEEEECCCCc
Confidence 43322 22223332 366788888765 368888876553
No 259
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=82.69 E-value=23 Score=30.64 Aligned_cols=146 Identities=13% Similarity=0.070 Sum_probs=81.4
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
++.||+... ....+.++|+....-..+.+... ...+++++- ++.||+.... .+.+.++++....-+.
T Consensus 47 ~~~ly~~d~-----~~~~I~~~~~~g~~~~~~~~~~~-~~p~~ia~d~~~~~lyv~d~~-----~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 47 DKVVYWTDI-----SEPSIGRASLHGGEPTTIIRQDL-GSPEGIALDHLGRTIFWTDSQ-----LDRIEVAKMDGTQRRV 115 (267)
T ss_dssp TTEEEEEET-----TTTEEEEEESSSCCCEEEECTTC-CCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEE
T ss_pred CCEEEEEEC-----CCCEEEEEecCCCCcEEEEECCC-CCccEEEEEecCCeEEEEECC-----CCEEEEEEcCCCCEEE
Confidence 578888753 22578999988765433221111 123455553 5789998643 2578999987654333
Q ss_pred c-CCCCCCcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE--CCEEEEEcCCC
Q psy11333 365 D-VAPTTSCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL--GGFLYAIGGSD 439 (482)
Q Consensus 365 ~-~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~ 439 (482)
+ ...+..| .++++. +++||+..... ....++++++....-..+..... ..-.+++.- +++||+.-..+
T Consensus 116 ~~~~~~~~P---~~i~vd~~~g~lyv~~~~~---~~~~I~~~~~dg~~~~~~~~~~~-~~P~gia~d~~~~~lyv~d~~~ 188 (267)
T 1npe_A 116 LFDTGLVNP---RGIVTDPVRGNLYWTDWNR---DNPKIETSHMDGTNRRILAQDNL-GLPNGLTFDAFSSQLCWVDAGT 188 (267)
T ss_dssp EECSSCSSE---EEEEEETTTTEEEEEECCS---SSCEEEEEETTSCCCEEEECTTC-SCEEEEEEETTTTEEEEEETTT
T ss_pred EEECCCCCc---cEEEEeeCCCEEEEEECCC---CCcEEEEEecCCCCcEEEEECCC-CCCcEEEEcCCCCEEEEEECCC
Confidence 3 1112222 344443 68999986321 12468888876543333322111 122233333 56899886432
Q ss_pred CCCCCCeEEEEeCCCC
Q psy11333 440 GQSPLNTVERFDPKLN 455 (482)
Q Consensus 440 ~~~~~~~~~~y~~~~~ 455 (482)
+.+++||+...
T Consensus 189 -----~~I~~~~~~g~ 199 (267)
T 1npe_A 189 -----HRAECLNPAQP 199 (267)
T ss_dssp -----TEEEEEETTEE
T ss_pred -----CEEEEEecCCC
Confidence 57999998754
No 260
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=82.44 E-value=5.9 Score=37.57 Aligned_cols=148 Identities=11% Similarity=0.089 Sum_probs=71.9
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCC-eeeccCCCCCCCceeEEEE---CCEEEEEecCCCCCCCCeEEEEeCCCCc-
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSD-WKIVAPMSKRRCGVGVAVL---NDLLYAVGGHDGQSYLNSIERYDPQTNQ- 361 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~~~~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~- 361 (482)
++.+++.|+.. ..+..||..+.. ...+..+.........+.+ +..+++.|+.+ ..+.+||..+..
T Consensus 243 ~~~~l~s~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d-----g~v~vwd~~~~~~ 312 (430)
T 2xyi_A 243 HESLFGSVADD-----QKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD-----KTVALWDLRNLKL 312 (430)
T ss_dssp CTTEEEEEETT-----SEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTCTTS
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC-----CeEEEEeCCCCCC
Confidence 45666666532 468889988753 1111111111122223333 33588888865 368999987632
Q ss_pred -eeecCCCCCCcccceeEEEE---CCEEEEEeccCCCcccCeEEEEeCCCCce------------eecCCCC-CCccceE
Q psy11333 362 -WSCDVAPTTSCRTSVGVAVL---DGFLYAVGGQDGVQCLNHVERYDPKENKW------------SRVAPMT-TRRLGVA 424 (482)
Q Consensus 362 -W~~~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~yd~~~~~W------------~~~~~~~-~~r~~~~ 424 (482)
-..+ .. .......+.+ +..+++.||.++ .+..||..+..= ..+.... .......
T Consensus 313 ~~~~~-~~---h~~~v~~i~~sp~~~~~l~s~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 383 (430)
T 2xyi_A 313 KLHSF-ES---HKDEIFQVQWSPHNETILASSGTDR-----RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 383 (430)
T ss_dssp CSEEE-EC---CSSCEEEEEECSSCTTEEEEEETTS-----CCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEE
T ss_pred CeEEe-ec---CCCCEEEEEECCCCCCEEEEEeCCC-----cEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceE
Confidence 1111 11 1111222222 346788887643 466777765210 0000011 1111112
Q ss_pred EEEE-CCE-EEEEcCCCCCCCCCeEEEEeCCCCcee
Q psy11333 425 VAVL-GGF-LYAIGGSDGQSPLNTVERFDPKLNRWT 458 (482)
Q Consensus 425 ~~~~-~~~-i~v~GG~~~~~~~~~~~~y~~~~~~W~ 458 (482)
+... ++. +++.|+.+ +.+.+|++.++.+.
T Consensus 384 ~~~~p~~~~~l~s~s~d-----g~i~iw~~~~~~~~ 414 (430)
T 2xyi_A 384 FSWNPNEPWIICSVSED-----NIMQVWQMAENVYN 414 (430)
T ss_dssp EEECSSSTTEEEEEETT-----SEEEEEEECHHHHC
T ss_pred EEECCCCCCEEEEEECC-----CCEEEeEccccccc
Confidence 2222 455 77777765 47888888766554
No 261
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=82.43 E-value=30 Score=31.74 Aligned_cols=139 Identities=14% Similarity=-0.013 Sum_probs=73.5
Q ss_pred ceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCccc--ceeEE
Q psy11333 303 SSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRT--SVGVA 379 (482)
Q Consensus 303 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~--~~~~~ 379 (482)
..+..+|+.+.+...... ....-.+++.. ++++.+.|+. +.+.+|+..++..... ........ .....
T Consensus 157 ~~i~iwd~~~~~~~~~~~--~~~~V~~v~fspdg~~l~s~s~------~~~~~~~~~~~~~~~~-~~~~~~~~~v~~v~f 227 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIE--TRGEVKDLHFSTDGKVVAYITG------SSLEVISTVTGSCIAR-KTDFDKNWSLSKINF 227 (365)
T ss_dssp CEEEEEETTTTEEEEEEE--CSSCCCEEEECTTSSEEEEECS------SCEEEEETTTCCEEEE-ECCCCTTEEEEEEEE
T ss_pred CEEEEeECCCCcEEEEeC--CCCceEEEEEccCCceEEeccc------eeEEEEEeccCcceee-eecCCCCCCEEEEEE
Confidence 467888988876543221 11111233332 6677666652 3477888877765432 11111111 11223
Q ss_pred EECCEEEEEeccCCCcccCeEEEEeCCCCceeecC--CCCC-CccceEEEEE-CCEEEEEcCCCCCCCCCeEEEEeCCCC
Q psy11333 380 VLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVA--PMTT-RRLGVAVAVL-GGFLYAIGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 380 ~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--~~~~-~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~y~~~~~ 455 (482)
.-+++.++.++.++.. ...+..+|.....+.... .+.. .....+++.. +|++++.|+.+ +.|.+||..+.
T Consensus 228 spdg~~l~~~s~d~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D-----~~V~iwd~~~~ 301 (365)
T 4h5i_A 228 IADDTVLIAASLKKGK-GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND-----NSIALVKLKDL 301 (365)
T ss_dssp EETTEEEEEEEESSSC-CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT-----SCEEEEETTTT
T ss_pred cCCCCEEEEEecCCcc-eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCC-----CEEEEEECCCC
Confidence 4578888888765432 134666776665554322 1111 1111222222 78888888876 36889998765
Q ss_pred c
Q psy11333 456 R 456 (482)
Q Consensus 456 ~ 456 (482)
+
T Consensus 302 ~ 302 (365)
T 4h5i_A 302 S 302 (365)
T ss_dssp E
T ss_pred c
Confidence 4
No 262
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=82.24 E-value=50 Score=34.22 Aligned_cols=132 Identities=14% Similarity=0.146 Sum_probs=73.4
Q ss_pred eEEE--ECCEEEEEecCCCCCCCCeEEEEeCCCCceeecC-CCCCCcccceeEEEE--CCEEEEEeccCCCcccCeEEEE
Q psy11333 329 GVAV--LNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDV-APTTSCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERY 403 (482)
Q Consensus 329 ~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~y 403 (482)
++++ .++.||+.-.. .+.|+++++....-+.+. ..+..| .++++. ++.||+.--. ....+++.
T Consensus 475 GLAvD~~~~~LY~tD~~-----~~~I~v~~ldG~~~~~l~~~~l~~P---~gIaVDp~~g~LYwtD~g----~~~~I~~~ 542 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG----TPAKIKKG 542 (791)
T ss_dssp EEEEETTTTEEEEEETT-----TTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECS----SSCEEEEE
T ss_pred eeeeeecCCcEEEEecC-----CCeEEEEeCCCCeEEEEEeCCCCCc---ceEEEecCCCCEEEecCC----CCCeEEEE
Confidence 4555 36799998642 357999999877655441 223333 245553 5899998521 12568888
Q ss_pred eCCCCceeecCCCCCCccceE-EEEE--CCEEEEEcCCCCCCCCCeEEEEeCCCCceeec-CCCCcCCCceeEEEEcCCC
Q psy11333 404 DPKENKWSRVAPMTTRRLGVA-VAVL--GGFLYAIGGSDGQSPLNTVERFDPKLNRWTAM-APMSTRRKHLGCAVFVGDN 479 (482)
Q Consensus 404 d~~~~~W~~~~~~~~~r~~~~-~~~~--~~~i~v~GG~~~~~~~~~~~~y~~~~~~W~~~-~~~~~~r~~~~~~~~~~~~ 479 (482)
++....-..+.. ....... +++- +++||+.-.. ...|+++++....-..+ ..-..-....++++.++++
T Consensus 543 ~~dG~~~~~lv~--~~l~~P~GLavD~~~~~LYwaD~~-----~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~l 615 (791)
T 3m0c_C 543 GLNGVDIYSLVT--ENIQWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKV 615 (791)
T ss_dssp ETTSCCEEEEEC--SSCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEE
T ss_pred ecCCCceEEEEe--CCCCCceEEEEecCCCeEEEEeCC-----CCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEE
Confidence 887554333322 1112222 3333 6899998533 25799999865433333 2211112334666666655
No 263
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=82.05 E-value=4 Score=37.00 Aligned_cols=68 Identities=10% Similarity=-0.001 Sum_probs=41.2
Q ss_pred CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEE-ECC-EEEEEeccCCCcccCeEEEEeCCCCcee
Q psy11333 334 NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAV-LDG-FLYAVGGQDGVQCLNHVERYDPKENKWS 411 (482)
Q Consensus 334 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~-~~~-~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 411 (482)
++.+|+.++.+ ..+.+||+.+++.... -+.+.......++. -++ .+|+.++. ...+..||+.+.+..
T Consensus 10 ~~~~~v~~~~~-----~~v~~~d~~~~~~~~~-~~~~~~~~~~~~~~s~dg~~~~v~~~~-----~~~i~~~d~~t~~~~ 78 (349)
T 1jmx_B 10 GHEYMIVTNYP-----NNLHVVDVASDTVYKS-CVMPDKFGPGTAMMAPDNRTAYVLNNH-----YGDIYGIDLDTCKNT 78 (349)
T ss_dssp TCEEEEEEETT-----TEEEEEETTTTEEEEE-EECSSCCSSCEEEECTTSSEEEEEETT-----TTEEEEEETTTTEEE
T ss_pred CCEEEEEeCCC-----CeEEEEECCCCcEEEE-EecCCCCCCceeEECCCCCEEEEEeCC-----CCcEEEEeCCCCcEE
Confidence 67888888754 5799999998876533 12222001123333 244 57777643 246899999887654
Q ss_pred e
Q psy11333 412 R 412 (482)
Q Consensus 412 ~ 412 (482)
.
T Consensus 79 ~ 79 (349)
T 1jmx_B 79 F 79 (349)
T ss_dssp E
T ss_pred E
Confidence 3
No 264
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=81.97 E-value=23 Score=36.19 Aligned_cols=115 Identities=8% Similarity=-0.106 Sum_probs=62.3
Q ss_pred CcEEEEeccc-cCCCCCceeEEEeCCCCCeeeccCCCCCC----------------------C-ceeEEE-ECCEEEEEe
Q psy11333 287 GEVLFAVGGW-CSGDAISSVERYDPQSSDWKIVAPMSKRR----------------------C-GVGVAV-LNDLLYAVG 341 (482)
Q Consensus 287 ~~~l~~~GG~-~~~~~~~~~~~~d~~~~~W~~~~~~~~~~----------------------~-~~~~~~-~~~~iyv~G 341 (482)
++..+++++. .++.....++.+|..+.+...+....... . -.+.+. -+++..+++
T Consensus 47 dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~ 126 (741)
T 2ecf_A 47 DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFP 126 (741)
T ss_dssp TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEE
T ss_pred CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEE
Confidence 4554445443 33333457999999998876544321100 0 112222 266655555
Q ss_pred cCCCCCCCCeEEEEeCCCC---ceeecCCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecCC
Q psy11333 342 GHDGQSYLNSIERYDPQTN---QWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAP 415 (482)
Q Consensus 342 G~~~~~~~~~~~~yd~~~~---~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 415 (482)
+. .+++.||..++ .-+.+ ...... .......-+|+..+++.. ..++.+|+.+.+...+..
T Consensus 127 ~~------~~i~~~d~~~~~~~~~~~l-~~~~~~-~~~~~~SPDG~~la~~~~------~~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 127 LG------GELYLYDLKQEGKAAVRQL-THGEGF-ATDAKLSPKGGFVSFIRG------RNLWVIDLASGRQMQLTA 189 (741)
T ss_dssp ET------TEEEEEESSSCSTTSCCBC-CCSSSC-EEEEEECTTSSEEEEEET------TEEEEEETTTTEEEECCC
T ss_pred eC------CcEEEEECCCCCcceEEEc-ccCCcc-cccccCCCCCCEEEEEeC------CcEEEEecCCCCEEEecc
Confidence 42 57999999887 55544 222111 111222336665555542 378999998877766543
No 265
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=81.70 E-value=28 Score=30.99 Aligned_cols=144 Identities=15% Similarity=0.028 Sum_probs=71.3
Q ss_pred CcE-EEEeccccCCCCCceeEEEeC-CCCCeeeccCCCCCCCceeEEEECCEEEEEecCCCCCCCCeEEEEeCCCCc---
Q psy11333 287 GEV-LFAVGGWCSGDAISSVERYDP-QSSDWKIVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQ--- 361 (482)
Q Consensus 287 ~~~-l~~~GG~~~~~~~~~~~~~d~-~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--- 361 (482)
++. .++.|+.. ..+..||. .+.....+...+....-.+++...+..++.|+.+ ..+..||..+..
T Consensus 67 ~~~~~l~~~~~d-----g~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~ 136 (342)
T 1yfq_A 67 NTDLQIYVGTVQ-----GEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD-----GLIEVIDPRNYGDGV 136 (342)
T ss_dssp SSSEEEEEEETT-----SCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETT-----SEEEEECHHHHTTBC
T ss_pred CCCcEEEEEcCC-----CeEEEEEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCC-----CeEEEEccccccccc
Confidence 455 56666532 36888998 8777655443111222223333335666677655 368889877500
Q ss_pred ----eeecCCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCC-Cc--eeecCCCCCCccceEEEEE--CCEE
Q psy11333 362 ----WSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKE-NK--WSRVAPMTTRRLGVAVAVL--GGFL 432 (482)
Q Consensus 362 ----W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~-~~--W~~~~~~~~~r~~~~~~~~--~~~i 432 (482)
.+.+ .....+..-.++....+. +++|+.+ ..+..||..+ .. ..... .+......++... ++..
T Consensus 137 ~~~~~~~~-~~~~~~~~v~~~~~~~~~-l~~~~~d-----~~i~i~d~~~~~~~~~~~~~-~~~~~~i~~i~~~~~~~~~ 208 (342)
T 1yfq_A 137 IAVKNLNS-NNTKVKNKIFTMDTNSSR-LIVGMNN-----SQVQWFRLPLCEDDNGTIEE-SGLKYQIRDVALLPKEQEG 208 (342)
T ss_dssp EEEEESCS-SSSSSCCCEEEEEECSSE-EEEEEST-----TEEEEEESSCCTTCCCEEEE-CSCSSCEEEEEECSGGGCE
T ss_pred ccccCCee-eEEeeCCceEEEEecCCc-EEEEeCC-----CeEEEEECCccccccceeee-cCCCCceeEEEECCCCCCE
Confidence 1212 222222222334444455 5566543 3688899877 33 22121 1112222233333 4677
Q ss_pred EEEcCCCCCCCCCeEEEEeCC
Q psy11333 433 YAIGGSDGQSPLNTVERFDPK 453 (482)
Q Consensus 433 ~v~GG~~~~~~~~~~~~y~~~ 453 (482)
++.|+.++ .+.+|+..
T Consensus 209 l~~~~~dg-----~i~i~~~~ 224 (342)
T 1yfq_A 209 YACSSIDG-----RVAVEFFD 224 (342)
T ss_dssp EEEEETTS-----EEEEEECC
T ss_pred EEEEecCC-----cEEEEEEc
Confidence 77777653 45555543
No 266
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=81.56 E-value=7.4 Score=35.35 Aligned_cols=104 Identities=15% Similarity=0.088 Sum_probs=59.2
Q ss_pred CEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCceee
Q psy11333 335 DLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWSR 412 (482)
Q Consensus 335 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 412 (482)
+.+++.|+.++ .+.+||..+.+-........ ..-.++... ++.+++.|+.++ .+..||..+.+-..
T Consensus 85 ~~~l~~~~~dg-----~i~v~d~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~ 152 (366)
T 3k26_A 85 HPLLAVAGSRG-----IIRIINPITMQCIKHYVGHG--NAINELKFHPRDPNLLLSVSKDH-----ALRLWNIQTDTLVA 152 (366)
T ss_dssp CEEEEEEETTC-----EEEEECTTTCCEEEEEESCC--SCEEEEEECSSCTTEEEEEETTS-----CEEEEETTTTEEEE
T ss_pred CCEEEEecCCC-----EEEEEEchhceEeeeecCCC--CcEEEEEECCCCCCEEEEEeCCC-----eEEEEEeecCeEEE
Confidence 56788887653 68999988765332201111 111222222 677888887643 58889988765443
Q ss_pred cC-CCC-CCccceEEEEE-CCEEEEEcCCCCCCCCCeEEEEeCCCC
Q psy11333 413 VA-PMT-TRRLGVAVAVL-GGFLYAIGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 413 ~~-~~~-~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~y~~~~~ 455 (482)
.- .+. ......++... ++..++.||.+ +.+.+||..+.
T Consensus 153 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~ 193 (366)
T 3k26_A 153 IFGGVEGHRDEVLSADYDLLGEKIMSCGMD-----HSLKLWRINSK 193 (366)
T ss_dssp EECSTTSCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESCSH
T ss_pred EecccccccCceeEEEECCCCCEEEEecCC-----CCEEEEECCCC
Confidence 32 111 22222223322 56777777765 36889998755
No 267
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=81.31 E-value=26 Score=32.76 Aligned_cols=102 Identities=14% Similarity=0.102 Sum_probs=51.9
Q ss_pred CCEEEEE-ecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEE-EE-CCEEEEEeccCCCcccCeEEEEeCCCCce
Q psy11333 334 NDLLYAV-GGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVA-VL-DGFLYAVGGQDGVQCLNHVERYDPKENKW 410 (482)
Q Consensus 334 ~~~iyv~-GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~-~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W 410 (482)
++.+++. ||... ..+..||..+.+-... -..... ..+++ .. ++.+++.+|... ..+..||..+.+
T Consensus 288 ~~~~la~~~gs~D----~~I~iwd~~t~~~~~~-~~~~~~--v~~~~~~~~~~~lv~~sg~~d----~~I~iwd~~~~~- 355 (420)
T 4gga_A 288 QSNVLATGGGTSD----RHIRIWNVCSGACLSA-VDAHSQ--VCSILWSPHYKELISGHGFAQ----NQLVIWKYPTMA- 355 (420)
T ss_dssp CTTEEEEEECTTT----CEEEEEETTTTEEEEE-EECSSC--EEEEEEETTTTEEEEEECTTT----CCEEEEETTTCC-
T ss_pred cccEEEEEeecCC----CEEEEEeCCcccccee-eccccc--eeeeeecCCCCeEEEEEecCC----CEEEEEECCCCc-
Confidence 4455544 44322 4688999998875433 111111 11222 22 445555555432 357888876543
Q ss_pred eecCCCC-CCccceEEEEE-CCEEEEEcCCCCCCCCCeEEEEeCC
Q psy11333 411 SRVAPMT-TRRLGVAVAVL-GGFLYAIGGSDGQSPLNTVERFDPK 453 (482)
Q Consensus 411 ~~~~~~~-~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~y~~~ 453 (482)
.+..+. ......+++.. +|..++.||.+ ..+.+||..
T Consensus 356 -~v~~l~gH~~~V~~l~~spdg~~l~S~s~D-----~tvriWdv~ 394 (420)
T 4gga_A 356 -KVAELKGHTSRVLSLTMSPDGATVASAAAD-----ETLRLWRCF 394 (420)
T ss_dssp -EEEEECCCSSCEEEEEECTTSSCEEEEETT-----TEEEEECCS
T ss_pred -EEEEEcCCCCCEEEEEEcCCCCEEEEEecC-----CeEEEEECC
Confidence 232221 11112222222 77888888876 367888764
No 268
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=81.21 E-value=11 Score=33.71 Aligned_cols=106 Identities=14% Similarity=0.274 Sum_probs=56.7
Q ss_pred CCEEEEEecCCCCCCCCeEEEEeCCCC--ceeecCCCCCCcccce-eEEEE---CCEEEEEeccCCCcccCeEEEEeCCC
Q psy11333 334 NDLLYAVGGHDGQSYLNSIERYDPQTN--QWSCDVAPTTSCRTSV-GVAVL---DGFLYAVGGQDGVQCLNHVERYDPKE 407 (482)
Q Consensus 334 ~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~~r~~~-~~~~~---~~~lyv~GG~~~~~~~~~~~~yd~~~ 407 (482)
++.+.+.|+.+ ..+..||..+. .|+.. ..+....... ++... ++.+++.|+.++ .+..||..+
T Consensus 22 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg-----~v~vwd~~~ 90 (351)
T 3f3f_A 22 YGRHVATCSSD-----QHIKVFKLDKDTSNWELS-DSWRAHDSSIVAIDWASPEYGRIIASASYDK-----TVKLWEEDP 90 (351)
T ss_dssp SSSEEEEEETT-----SEEEEEEECSSSCCEEEE-EEEECCSSCEEEEEECCGGGCSEEEEEETTS-----CEEEEEECT
T ss_pred CCCEEEEeeCC-----CeEEEEECCCCCCcceec-ceeccCCCcEEEEEEcCCCCCCEEEEEcCCC-----eEEEEecCC
Confidence 56677777755 36788887754 34433 2111111122 22332 377888887653 467777765
Q ss_pred C-------ceeecCCCCCCccceEEEEE--C--CEEEEEcCCCCCCCCCeEEEEeCCCC
Q psy11333 408 N-------KWSRVAPMTTRRLGVAVAVL--G--GFLYAIGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 408 ~-------~W~~~~~~~~~r~~~~~~~~--~--~~i~v~GG~~~~~~~~~~~~y~~~~~ 455 (482)
. .|..+..+.........+.+ + +..++.|+.+ ..+.+||..+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~ 144 (351)
T 3f3f_A 91 DQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND-----GILRLYDALEP 144 (351)
T ss_dssp TSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----CEEEEEECSST
T ss_pred CcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC-----CcEEEecCCCh
Confidence 4 23333322222222222223 3 6777777765 46888887654
No 269
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=81.01 E-value=12 Score=31.19 Aligned_cols=100 Identities=14% Similarity=0.075 Sum_probs=56.1
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCe-eeccC--CCCCCCceeEEE--ECCEEEEEecCCCCCCCCeEEEEeCCCCc
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDW-KIVAP--MSKRRCGVGVAV--LNDLLYAVGGHDGQSYLNSIERYDPQTNQ 361 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W-~~~~~--~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 361 (482)
++++|++-| +..|+|+..+..- +.+.. +|......-+|. -++++|++-| +..++||..+++
T Consensus 64 ~~~~yfFkG-------~~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg-------~~ywr~d~~~~~ 129 (195)
T 1itv_A 64 SKKLFFFSG-------RQVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG-------RRLWRFDVKAQM 129 (195)
T ss_dssp TCCEEEEET-------TEEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET-------TEEEEEETTTTE
T ss_pred CCeEEEEeC-------CEEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC-------CEEEEEeCCccc
Confidence 678999987 4567777542111 01111 222111223333 3789999987 468999987653
Q ss_pred eee-----c---CCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCc
Q psy11333 362 WSC-----D---VAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENK 409 (482)
Q Consensus 362 W~~-----~---~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~ 409 (482)
=.. + =+.+| ..--++...+|.+|.+-| +..++||..+.+
T Consensus 130 ~~~gyPr~i~~~w~Gvp--~~idaa~~~~g~~Yffkg-------~~y~~~~~~~~~ 176 (195)
T 1itv_A 130 VDPRSASEVDRMFPGVP--LDTHDVFQFREKAYFCQD-------RFYWRVSSRSEL 176 (195)
T ss_dssp ECGGGCEEHHHHSTTSC--SSCSEEEEETTEEEEEET-------TEEEEEECCTTC
T ss_pred ccCCCccChhhcCCCCC--CCCCEEEEeCCeEEEEeC-------CEEEEEECCccE
Confidence 111 0 01122 122345556799999977 357778876554
No 270
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=80.53 E-value=37 Score=31.54 Aligned_cols=157 Identities=15% Similarity=0.127 Sum_probs=88.2
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCC---CCC--C-----Cc--eeEEEE----CCEEEEEecCCCCCCCC
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPM---SKR--R-----CG--VGVAVL----NDLLYAVGGHDGQSYLN 350 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~---~~~--~-----~~--~~~~~~----~~~iyv~GG~~~~~~~~ 350 (482)
.+.||+.+.. +.+-.-+++.+....+|+.+... +.. + .. .++++- .+.||+.+. ..
T Consensus 67 ~~~l~~g~~~--g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~------~g 138 (394)
T 3b7f_A 67 PERMLMAART--GHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS------PQ 138 (394)
T ss_dssp TTCEEEEEEC----CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE------TT
T ss_pred CCeEEEEecC--CCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec------CC
Confidence 4678876532 11112578888888999887532 211 1 01 123332 467777543 13
Q ss_pred eEEEEeCCCCceeecCCCC---CC--------------cccceeEEEE---CCEEEEEeccCCCcccCeEEEEeCCCCce
Q psy11333 351 SIERYDPQTNQWSCDVAPT---TS--------------CRTSVGVAVL---DGFLYAVGGQDGVQCLNHVERYDPKENKW 410 (482)
Q Consensus 351 ~~~~yd~~~~~W~~~~~~~---~~--------------~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~yd~~~~~W 410 (482)
.+++.+-...+|+.+ ... |. ....+++++. .+.||+..+. ..+++.+-...+|
T Consensus 139 gl~~S~DgG~tW~~~-~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~------ggl~~s~DgG~tW 211 (394)
T 3b7f_A 139 GLFRSTDHGASWEPV-AGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS------GGVFESTDAGTDW 211 (394)
T ss_dssp EEEEESSTTSBCEEC-HHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET------BEEEEESSTTSSC
T ss_pred cEEEEcCCCCCeEEC-cCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC------CCEEEECCCCCCc
Confidence 588888888899987 321 21 1112334433 3678876432 2467777777899
Q ss_pred eecCCC------CCC-----ccceEEEEE-C--CEEEEEcCCCCCCCCCeEEEEeCCCCceeecCC-CCc
Q psy11333 411 SRVAPM------TTR-----RLGVAVAVL-G--GFLYAIGGSDGQSPLNTVERFDPKLNRWTAMAP-MST 465 (482)
Q Consensus 411 ~~~~~~------~~~-----r~~~~~~~~-~--~~i~v~GG~~~~~~~~~~~~y~~~~~~W~~~~~-~~~ 465 (482)
+.+..- |.+ ...+.++.. + +.||+..+ ..+++.+....+|+.+.. +|.
T Consensus 212 ~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~-------~gl~~s~D~G~tW~~~~~~l~~ 274 (394)
T 3b7f_A 212 KPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH-------CGIYRMDRREGVWKRIGDAMPR 274 (394)
T ss_dssp EECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET-------TEEEEEETTTTEEECGGGGSCT
T ss_pred eECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC-------CeEEEeCCCCCcceECCCCCCC
Confidence 887531 211 223344433 2 67777432 358888888889999853 443
No 271
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=80.40 E-value=11 Score=35.57 Aligned_cols=103 Identities=17% Similarity=0.181 Sum_probs=51.8
Q ss_pred EEEEecCCCCCCCCeEEEEeCCCCc---eeecC-CCC-CCcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCc
Q psy11333 337 LYAVGGHDGQSYLNSIERYDPQTNQ---WSCDV-APT-TSCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENK 409 (482)
Q Consensus 337 iyv~GG~~~~~~~~~~~~yd~~~~~---W~~~~-~~~-~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~ 409 (482)
+++.|+.++ .+..||..+.. +.... ... .....-.+++.. ++.+++.|+.+ ..+..||..+..
T Consensus 196 ~l~s~~~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-----g~i~i~d~~~~~ 265 (430)
T 2xyi_A 196 YLLSASDDH-----TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD-----QKLMIWDTRNNN 265 (430)
T ss_dssp EEEEECTTS-----CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTCSC
T ss_pred eEEEEeCCC-----eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC-----CeEEEEECCCCC
Confidence 777777653 58899988732 22110 001 111111222222 56788887754 368889988652
Q ss_pred -eeecCCCCCCccceEEEEE--CC-EEEEEcCCCCCCCCCeEEEEeCCC
Q psy11333 410 -WSRVAPMTTRRLGVAVAVL--GG-FLYAIGGSDGQSPLNTVERFDPKL 454 (482)
Q Consensus 410 -W~~~~~~~~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~~~~y~~~~ 454 (482)
...+..+.........+.+ ++ .+++.|+.+ +.+.+||..+
T Consensus 266 ~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d-----g~v~vwd~~~ 309 (430)
T 2xyi_A 266 TSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD-----KTVALWDLRN 309 (430)
T ss_dssp SSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTC
T ss_pred CCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC-----CeEEEEeCCC
Confidence 1111111111111222223 33 488888875 3688888764
No 272
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=80.34 E-value=34 Score=31.02 Aligned_cols=68 Identities=12% Similarity=0.178 Sum_probs=35.6
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCC-CceeEEEECCE-EEEEecCCCCCCCCeEEEEeCCCC
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRR-CGVGVAVLNDL-LYAVGGHDGQSYLNSIERYDPQTN 360 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~-~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~yd~~~~ 360 (482)
+..||+.+........-.+|.+|..+.+.+.+...+... ....++. +++ ||+.+..+ ..+.+|+..++
T Consensus 61 g~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~-dg~~l~~~~~~~-----~~v~~~~~~~~ 130 (361)
T 3scy_A 61 GKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT-NGKNIVTANYSG-----GSITVFPIGQD 130 (361)
T ss_dssp SSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE-CSSEEEEEETTT-----TEEEEEEBCTT
T ss_pred CCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE-CCCEEEEEECCC-----CEEEEEEeCCC
Confidence 446777664321112224566777777776665443222 2233333 555 66554322 46888887643
No 273
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=80.21 E-value=26 Score=29.66 Aligned_cols=137 Identities=15% Similarity=0.197 Sum_probs=72.6
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCCe--eec----cCCCCCCCceeEEEECCEEEEEecCCCCCCCCeEEEEeCCC
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSDW--KIV----APMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQT 359 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W--~~~----~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~ 359 (482)
.++++|++-| +..|+++.....+ ..+ +.+|. ... ++...++++|++-| +.+++|+..+
T Consensus 27 ~~g~~yfFkg-------~~~Wr~~~~~~~~~p~~Is~~wpgLP~-~ID-AA~~~~~~~yfFkG-------~~yw~~~~~~ 90 (219)
T 1hxn_A 27 NHGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQWPQGPS-TVD-AAFSWEDKLYLIQD-------TKVYVFLTKG 90 (219)
T ss_dssp TTSCEEEEET-------TEEEESSSSSCTTCCEEGGGTCTTSCS-SCS-EEEEETTEEEEEET-------TEEEEEECSS
T ss_pred CCCcEEEEeC-------CEEEEEcCCCCCCCceEhhhhccCCCC-Ccc-EEEEECCcEEEecC-------CEEEEEeCCC
Confidence 5788999877 3466666543322 111 12332 222 23335899999987 4688998653
Q ss_pred C-ce-----eecC--CCCCCc--ccceeEEE-E--CCEEEEEeccCCCcccCeEEEEeCCC---CceeecCCCCCCccce
Q psy11333 360 N-QW-----SCDV--APTTSC--RTSVGVAV-L--DGFLYAVGGQDGVQCLNHVERYDPKE---NKWSRVAPMTTRRLGV 423 (482)
Q Consensus 360 ~-~W-----~~~~--~~~~~~--r~~~~~~~-~--~~~lyv~GG~~~~~~~~~~~~yd~~~---~~W~~~~~~~~~r~~~ 423 (482)
+ += +.+. -.+|.. .....++. . ++++|.+-| +..|+||..+ ..|...+.+| ....+
T Consensus 91 ~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~P~~i~~~~~g~p-~~vdA 162 (219)
T 1hxn_A 91 GYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG-------RRLWWLDLKSGAQATWTELPWPH-EKVDG 162 (219)
T ss_dssp SCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET-------TEEEEEEGGGGGGCCCEEECCSC-SCCSE
T ss_pred CceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC-------CEEEEEeCCCCceEhhhcCCCCC-CCcCE
Confidence 2 10 0110 012222 11233333 2 589999987 4578888653 2344333322 22223
Q ss_pred EEEE-----------ECCEEEEEcCCCCCCCCCeEEEEeCC
Q psy11333 424 AVAV-----------LGGFLYAIGGSDGQSPLNTVERFDPK 453 (482)
Q Consensus 424 ~~~~-----------~~~~i~v~GG~~~~~~~~~~~~y~~~ 453 (482)
++.. .++.+|++-|. .-++||..
T Consensus 163 a~~~~~~~~~~~~~~~~~~~YFFkg~-------~y~r~~~~ 196 (219)
T 1hxn_A 163 ALCMEKPLGPNSCSTSGPNLYLIHGP-------NLYCYRHV 196 (219)
T ss_dssp EEEESSCSSSCCSCSSSCEEEEEETT-------EEEEESSH
T ss_pred EEEccccccccceeccCCeEEEEECC-------EEEEEeCC
Confidence 3331 35689999884 56888764
No 274
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=79.64 E-value=9 Score=35.33 Aligned_cols=154 Identities=14% Similarity=-0.003 Sum_probs=72.8
Q ss_pred ceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCC-CCCCCeEEEEeCCCCceeecCCCCCCcc-cceeEE
Q psy11333 303 SSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDG-QSYLNSIERYDPQTNQWSCDVAPTTSCR-TSVGVA 379 (482)
Q Consensus 303 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~-~~~~~~~~~yd~~~~~W~~~~~~~~~~r-~~~~~~ 379 (482)
..++.+|+.+.+-..+..-+. ...+....- +++..++..... ......++.+|..+...+.+ ....... ......
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~~-~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l-~~~~~~~~~~~~~~ 245 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQENQ-WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKV-KTHAEGESCTHEFW 245 (388)
T ss_dssp EEEEEEETTTCCEEEEEEESS-CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEES-CCCCTTEEEEEEEE
T ss_pred ceEEEEECCCCceEEeecCCc-cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEe-eeCCCCcccccceE
Confidence 578999998887655432211 111222222 454333332221 12245799999988877777 3322111 111122
Q ss_pred EECCE-EEEEeccCCCcccCeEEEEeCCCCceeecCCCCCC------ccceEEEEECC-EEEEEc----CCCCCCCCCeE
Q psy11333 380 VLDGF-LYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTR------RLGVAVAVLGG-FLYAIG----GSDGQSPLNTV 447 (482)
Q Consensus 380 ~~~~~-lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~------r~~~~~~~~~~-~i~v~G----G~~~~~~~~~~ 447 (482)
.-+|+ |+......+. ....++.||+.+.+-..+...+.. ..+. ...-+| .|++.. |+.. .....+
T Consensus 246 spdg~~l~~~~~~~~~-~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~-~~spdg~~l~~~~~~~~~~~~-~~~~~i 322 (388)
T 3pe7_A 246 VPDGSALVYVSYLKGS-PDRFIYSADPETLENRQLTSMPACSHLMSNYDGS-LMVGDGSDAPVDVQDDSGYKI-ENDPFL 322 (388)
T ss_dssp CTTSSCEEEEEEETTC-CCEEEEEECTTTCCEEEEEEECCEEEEEECTTSS-EEEEEECCC-------------CCCCEE
T ss_pred CCCCCEEEEEecCCCC-CcceEEEEecCCCceEEEEcCCCceeeeecCCCC-eEccCCCcceeEeeecccccc-CCCCEE
Confidence 23555 5443322221 112599999998876665443320 0001 122233 333321 1110 123579
Q ss_pred EEEeCCCCceeecC
Q psy11333 448 ERFDPKLNRWTAMA 461 (482)
Q Consensus 448 ~~y~~~~~~W~~~~ 461 (482)
+++|+.+++-..+.
T Consensus 323 ~~~d~~~~~~~~l~ 336 (388)
T 3pe7_A 323 YVFNMKNGTQHRVA 336 (388)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEEeccCCceEEec
Confidence 99999887665553
No 275
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=79.41 E-value=35 Score=30.71 Aligned_cols=63 Identities=10% Similarity=0.136 Sum_probs=33.6
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCc-eeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCc
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCG-VGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQ 361 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 361 (482)
++.+.+.|+.+ ..+..+|..+.+.... +...... .+++.. ++...+.||.+ ..+..||.....
T Consensus 87 ~~~~l~s~s~D-----~~v~lwd~~~~~~~~~--~~~h~~~v~~v~~sp~~~~l~s~~~d-----~~i~~wd~~~~~ 151 (343)
T 2xzm_R 87 ENCFAISSSWD-----KTLRLWDLRTGTTYKR--FVGHQSEVYSVAFSPDNRQILSAGAE-----REIKLWNILGEC 151 (343)
T ss_dssp STTEEEEEETT-----SEEEEEETTSSCEEEE--EECCCSCEEEEEECSSTTEEEEEETT-----SCEEEEESSSCE
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCcEEEE--EcCCCCcEEEEEECCCCCEEEEEcCC-----CEEEEEeccCCc
Confidence 44555555532 3678888887654221 1111111 222222 56667777765 368889987443
No 276
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=79.24 E-value=27 Score=35.61 Aligned_cols=143 Identities=10% Similarity=-0.032 Sum_probs=69.4
Q ss_pred eeEEEeCCC-CCeeeccCC-CCCCC-ceeEEEECCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCc----ccce
Q psy11333 304 SVERYDPQS-SDWKIVAPM-SKRRC-GVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSC----RTSV 376 (482)
Q Consensus 304 ~~~~~d~~~-~~W~~~~~~-~~~~~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~----r~~~ 376 (482)
.++.+|..+ .+-..+... ..... ...+. -+++..++++.+......+++.+|+.+.+.+.+ ...... ....
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~-~~~~~~~~~~~~~~ 341 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVL-AHETSPTWVPLHNS 341 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEE-EEEECSSCCCCCSC
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEE-EEcCCCCcCCcCCc
Confidence 788889887 665443322 11111 11122 444433333332222345799999999887765 111111 1112
Q ss_pred eEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEE--EEECC-EEEEEcCCCCCCCCCeEEEEeCC
Q psy11333 377 GVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAV--AVLGG-FLYAIGGSDGQSPLNTVERFDPK 453 (482)
Q Consensus 377 ~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~--~~~~~-~i~v~GG~~~~~~~~~~~~y~~~ 453 (482)
....-+|++++.++.++ ...++.+|.... +..+..-.. ..... ..-++ .|++.+..++. ....+|..+..
T Consensus 342 ~~~spdg~~~~~~~~~g---~~~l~~~~~~~~-~~~l~~~~~--~v~~~~~~s~dg~~l~~~~~~~~~-~~~~l~~~~~~ 414 (741)
T 2ecf_A 342 LRFLDDGSILWSSERTG---FQHLYRIDSKGK-AAALTHGNW--SVDELLAVDEKAGLAYFRAGIESA-RESQIYAVPLQ 414 (741)
T ss_dssp CEECTTSCEEEEECTTS---SCEEEEECSSSC-EEESCCSSS--CEEEEEEEETTTTEEEEEECSSCT-TCBEEEEEETT
T ss_pred eEECCCCeEEEEecCCC---ccEEEEEcCCCC-eeeeeecce--EEEeEeEEeCCCCEEEEEEeCCCC-ceEEEEEEEcC
Confidence 22334677777665443 357888887655 555543221 11122 22244 56666654321 12345555544
Q ss_pred CC
Q psy11333 454 LN 455 (482)
Q Consensus 454 ~~ 455 (482)
..
T Consensus 415 g~ 416 (741)
T 2ecf_A 415 GG 416 (741)
T ss_dssp CC
T ss_pred CC
Confidence 33
No 277
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=79.19 E-value=32 Score=30.13 Aligned_cols=92 Identities=13% Similarity=0.009 Sum_probs=47.5
Q ss_pred CeEEEEeCCCCceeecCCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCC-CCccceEEEEE
Q psy11333 350 NSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMT-TRRLGVAVAVL 428 (482)
Q Consensus 350 ~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~r~~~~~~~~ 428 (482)
..+..||..+..-... ...............++.+++.+|... ..+..||..+.+- +..+. ......+++..
T Consensus 221 ~~i~lwd~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~sg~~d----~~i~iwd~~~~~~--~~~l~gH~~~V~~l~~s 293 (318)
T 4ggc_A 221 RHIRIWNVCSGACLSA-VDAHSQVCSILWSPHYKELISGHGFAQ----NQLVIWKYPTMAK--VAELKGHTSRVLSLTMS 293 (318)
T ss_dssp CEEEEEETTTCCEEEE-EECSSCEEEEEEETTTTEEEEEECTTT----CCEEEEETTTCCE--EEEECCCSSCEEEEEEC
T ss_pred CEEEEEeccccccccc-ccceeeeeeeeecccccceEEEEEcCC----CEEEEEECCCCcE--EEEEcCCCCCEEEEEEc
Confidence 4688899887765433 222222222222223455555555322 3578899876543 22221 11112223332
Q ss_pred -CCEEEEEcCCCCCCCCCeEEEEeCC
Q psy11333 429 -GGFLYAIGGSDGQSPLNTVERFDPK 453 (482)
Q Consensus 429 -~~~i~v~GG~~~~~~~~~~~~y~~~ 453 (482)
++.+++.||.++ .+.+||..
T Consensus 294 pdg~~l~S~s~D~-----~v~iWd~~ 314 (318)
T 4ggc_A 294 PDGATVASAAADE-----TLRLWRCF 314 (318)
T ss_dssp TTSSCEEEEETTT-----EEEEECCS
T ss_pred CCCCEEEEEecCC-----eEEEEECC
Confidence 677888888763 67777764
No 278
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=79.00 E-value=24 Score=34.75 Aligned_cols=138 Identities=11% Similarity=-0.035 Sum_probs=73.9
Q ss_pred ceeEEEeC--CCCCeeeccCCCCCCCceeEEEECC-EEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEE
Q psy11333 303 SSVERYDP--QSSDWKIVAPMSKRRCGVGVAVLND-LLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVA 379 (482)
Q Consensus 303 ~~~~~~d~--~~~~W~~~~~~~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~ 379 (482)
..+|..+. ....- .+......+ ..+...++ .++++.+.. +....||..+++-+.+ ...+. .....
T Consensus 90 ~~l~~~~~~~~g~~~-~l~~~~~~~--~~~~s~dg~~~~~~s~~~-----~~~~l~d~~~g~~~~l-~~~~~---~~~~~ 157 (582)
T 3o4h_A 90 HALFKVNTSRPGEEQ-RLEAVKPMR--ILSGVDTGEAVVFTGATE-----DRVALYALDGGGLREL-ARLPG---FGFVS 157 (582)
T ss_dssp EEEEEEETTSTTCCE-ECTTSCSBE--EEEEEECSSCEEEEEECS-----SCEEEEEEETTEEEEE-EEESS---CEEEE
T ss_pred eEEEEEeccCCCccc-cccCCCCce--eeeeCCCCCeEEEEecCC-----CCceEEEccCCcEEEe-ecCCC---ceEEE
Confidence 46777877 44332 333322222 22333444 455554432 2344889988887766 32222 22333
Q ss_pred EECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCEEEEEcCCCCCCCCCeEEEEeCCCCcee
Q psy11333 380 VLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGFLYAIGGSDGQSPLNTVERFDPKLNRWT 458 (482)
Q Consensus 380 ~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~y~~~~~~W~ 458 (482)
.-+|+..++++.+... ...++.+|+.+.++..+...+.. ....+.. +|+.++.+..++ ...++++|.++++..
T Consensus 158 spDG~~la~~~~~~~~-~~~i~~~d~~~g~~~~l~~~~~~--~~~~~~SpDG~~l~~~~~~~---~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 158 DIRGDLIAGLGFFGGG-RVSLFTSNLSSGGLRVFDSGEGS--FSSASISPGMKVTAGLETAR---EARLVTVDPRDGSVE 231 (582)
T ss_dssp EEETTEEEEEEEEETT-EEEEEEEETTTCCCEEECCSSCE--EEEEEECTTSCEEEEEECSS---CEEEEEECTTTCCEE
T ss_pred CCCCCEEEEEEEcCCC-CeEEEEEcCCCCCceEeecCCCc--cccceECCCCCEEEEccCCC---eeEEEEEcCCCCcEE
Confidence 4467666665543211 24599999999988877533221 1222222 666555444332 247999999888776
No 279
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=78.76 E-value=0.16 Score=40.28 Aligned_cols=66 Identities=15% Similarity=0.217 Sum_probs=23.2
Q ss_pred CHHHHHHhcCCCCcCccceEEE-ccCCHHHHHHHHHHhhcCee-eeccccHhhHHHHhcccChhhHHH
Q psy11333 60 SPYFRAMFTGELAESRQAEVTI-RDIDDVAMDNLIEFCYTSHI-TVEESNVQTLLPAACLLQLVEIQD 125 (482)
Q Consensus 60 S~~F~~~~~~~~~e~~~~~i~l-~~~~~~~~~~~l~~~y~~~~-~~~~~~~~~ll~~a~~~~~~~L~~ 125 (482)
..+++.+|++....+..+...+ ...+...+..+.+.|-.... .++.+||..++.+|+.|++++|++
T Consensus 78 ~~~l~~~Y~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~Lk~ 145 (145)
T 4eoz_A 78 KEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKT 145 (145)
T ss_dssp HHHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHHHHHHHHCC---------------------------
T ss_pred HHHHHhhccCccCCcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHhcC
Confidence 3466788888876555443222 22234446667777766643 678999999999999999998873
No 280
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=78.40 E-value=30 Score=29.28 Aligned_cols=140 Identities=14% Similarity=0.088 Sum_probs=73.9
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCC-e--eec----cCCCCCCCceeEEE---ECCEEEEEecCCCCCCCCeEEEE
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSD-W--KIV----APMSKRRCGVGVAV---LNDLLYAVGGHDGQSYLNSIERY 355 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~-W--~~~----~~~~~~~~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~y 355 (482)
..+++|++-| +.+|+++..... . ..+ +.+|. ..-+|. .++++|++-| +..++|
T Consensus 39 ~~g~~~fFkg-------~~~Wr~~~~~~~~~~P~~I~~~wp~lp~---~IDAA~~~~~~~k~yfFkG-------~~yW~y 101 (218)
T 1gen_A 39 IRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPE---KIDAVYEAPQEEKAVFFAG-------NEYWIY 101 (218)
T ss_dssp ETTEEEEEET-------TEEEEESSTTSCCEEEEEGGGTCTTSCS---CCSEEEEETTTTEEEEEET-------TEEEEE
T ss_pred CCCcEEEEEC-------CEEEEEeCCCCccCCCEEHHHhcCCCCC---CccEEEEECCCCEEEEEeC-------CEEEEE
Confidence 4788888877 345666554421 1 111 22332 223333 2689999987 568899
Q ss_pred eCCCCce---eecCC-CCCCcccce-eEEE--ECCEEEEEeccCCCcccCeEEEEeCCCCceee-----cC-C-CCCCcc
Q psy11333 356 DPQTNQW---SCDVA-PTTSCRTSV-GVAV--LDGFLYAVGGQDGVQCLNHVERYDPKENKWSR-----VA-P-MTTRRL 421 (482)
Q Consensus 356 d~~~~~W---~~~~~-~~~~~r~~~-~~~~--~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~-----~~-~-~~~~r~ 421 (482)
|..+..- +.+.. .+|...... ++.. .++++|.+-| +..++||..+++-.. +. . +..|..
T Consensus 102 ~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG-------~~ywr~d~~~~~v~~gyPr~i~~~w~g~p~~ 174 (218)
T 1gen_A 102 SASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAWNAIPDN 174 (218)
T ss_dssp ETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCEEHHHHSSSCCSS
T ss_pred cCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC-------CEEEEEECccccccCCCCcchhhccCCCCCC
Confidence 8532110 01100 111111112 3333 3689999976 467888887653211 10 0 112233
Q ss_pred ceEEEEEC--CEEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 422 GVAVAVLG--GFLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 422 ~~~~~~~~--~~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
..++...+ |.+|++-| +..++||..+.+
T Consensus 175 idaAf~~~~~g~~YfFkg-------~~y~~~~~~~~~ 204 (218)
T 1gen_A 175 LDAVVDLQGGGHSYFFKG-------AYYLKLENQSLK 204 (218)
T ss_dssp CSEEEECTTTCEEEEEET-------TEEEEEETTEEE
T ss_pred CCEEEEEcCCCcEEEEEC-------CEEEEEECCcee
Confidence 33444544 89999988 357888876544
No 281
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=78.32 E-value=30 Score=31.12 Aligned_cols=102 Identities=7% Similarity=0.005 Sum_probs=57.1
Q ss_pred CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeE-EEECCEEEEEeccCCCcccCeEEEEeCCCCceee
Q psy11333 334 NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGV-AVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSR 412 (482)
Q Consensus 334 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~-~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 412 (482)
++.+|+++..+ ..+++||+.+++.+.. . .+. .-.++ ..-+|++|+... ..+.+||+.+.+...
T Consensus 60 ~~~l~~~d~~~-----~~i~~~d~~~~~~~~~-~-~~~--~v~~i~~~~dg~l~v~~~-------~gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 60 SGTAWWFNILE-----RELHELHLASGRKTVH-A-LPF--MGSALAKISDSKQLIASD-------DGLFLRDTATGVLTL 123 (326)
T ss_dssp TTEEEEEEGGG-----TEEEEEETTTTEEEEE-E-CSS--CEEEEEEEETTEEEEEET-------TEEEEEETTTCCEEE
T ss_pred CCEEEEEECCC-----CEEEEEECCCCcEEEE-E-CCC--cceEEEEeCCCeEEEEEC-------CCEEEEECCCCcEEE
Confidence 36788886532 4789999998876654 2 121 11222 235788887642 348999998888876
Q ss_pred cCCCCCC----ccceEEEEECCEEEEEcCC-CCCCCCCeEEEEe
Q psy11333 413 VAPMTTR----RLGVAVAVLGGFLYAIGGS-DGQSPLNTVERFD 451 (482)
Q Consensus 413 ~~~~~~~----r~~~~~~~~~~~i~v~GG~-~~~~~~~~~~~y~ 451 (482)
+...+.. +.....+.-+|++|+.... ........+++||
T Consensus 124 ~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 124 HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe
Confidence 6543221 1111122226677764321 1111234677777
No 282
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=78.17 E-value=32 Score=34.90 Aligned_cols=102 Identities=20% Similarity=0.220 Sum_probs=54.0
Q ss_pred EEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEE-ECCEEEEEeccCCCcccCeEEEEeCCCCceeecC
Q psy11333 336 LLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAV-LDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVA 414 (482)
Q Consensus 336 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 414 (482)
..++.|+.+ ..+.+||..+.+-........ ..-.+++. -++++++.||.++ .+..||..+.+-. .
T Consensus 532 ~~l~s~s~d-----~~v~vwd~~~~~~~~~~~~h~--~~v~~v~~spdg~~l~sg~~Dg-----~i~iwd~~~~~~~--~ 597 (694)
T 3dm0_A 532 PTIVSASWD-----KTVKVWNLSNCKLRSTLAGHT--GYVSTVAVSPDGSLCASGGKDG-----VVLLWDLAEGKKL--Y 597 (694)
T ss_dssp CEEEEEETT-----SCEEEEETTTCCEEEEECCCS--SCEEEEEECTTSSEEEEEETTS-----BCEEEETTTTEEE--E
T ss_pred ceEEEEeCC-----CeEEEEECCCCcEEEEEcCCC--CCEEEEEEeCCCCEEEEEeCCC-----eEEEEECCCCceE--E
Confidence 456667655 368899998776443201111 11112222 2678888888654 5778888776532 2
Q ss_pred CCCCCccceEEEEECCEEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 415 PMTTRRLGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 415 ~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
.+.......+++...+..++.+|.+ +.+.+||..+.+
T Consensus 598 ~~~~~~~v~~~~~sp~~~~l~~~~~-----~~i~iwd~~~~~ 634 (694)
T 3dm0_A 598 SLEANSVIHALCFSPNRYWLCAATE-----HGIKIWDLESKS 634 (694)
T ss_dssp CCBCSSCEEEEEECSSSSEEEEEET-----TEEEEEETTTTE
T ss_pred EecCCCcEEEEEEcCCCcEEEEEcC-----CCEEEEECCCCC
Confidence 2222222333444433333343432 358888887654
No 283
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=77.81 E-value=27 Score=32.68 Aligned_cols=107 Identities=12% Similarity=0.079 Sum_probs=59.1
Q ss_pred CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCcee
Q psy11333 334 NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWS 411 (482)
Q Consensus 334 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 411 (482)
++.+++.|+.+ ..+..||..+.+-.......+ .......+.+ +++.++.|+.++ .+..||..+.+..
T Consensus 181 ~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~~~dg-----~i~iwd~~~~~~~ 249 (437)
T 3gre_A 181 EKSLLVALTNL-----SRVIIFDIRTLERLQIIENSP-RHGAVSSICIDEECCVLILGTTRG-----IIDIWDIRFNVLI 249 (437)
T ss_dssp SCEEEEEEETT-----SEEEEEETTTCCEEEEEECCG-GGCCEEEEEECTTSCEEEEEETTS-----CEEEEETTTTEEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeeEEEccCC-CCCceEEEEECCCCCEEEEEcCCC-----eEEEEEcCCccEE
Confidence 47777888765 479999998876432201111 1112222223 677888887653 5888998876543
Q ss_pred ecCCCCCCccceEEEEE-----CCEEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 412 RVAPMTTRRLGVAVAVL-----GGFLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 412 ~~~~~~~~r~~~~~~~~-----~~~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
..-..+......+++.. ++.+++.|+.+ ..+.+||..+.+
T Consensus 250 ~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~ 294 (437)
T 3gre_A 250 RSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK-----TFLTIWNFVKGH 294 (437)
T ss_dssp EEEBCTTCEEEEEEEECTTTCTTEEEEEEESTT-----EEEEEEETTTTE
T ss_pred EEEecCCCCceEEEEeccccCCCccEEEEEcCC-----CcEEEEEcCCCc
Confidence 32222221111122111 35577777665 368888887654
No 284
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=77.74 E-value=14 Score=33.01 Aligned_cols=90 Identities=20% Similarity=0.382 Sum_probs=45.9
Q ss_pred eEEEeCCCC-CeeeccCCCCCCCceeEEEECCEEEEEecCCCCCCCCeEEEEeCC-CCceeecCCCCCCcccceeEEEE-
Q psy11333 305 VERYDPQSS-DWKIVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQ-TNQWSCDVAPTTSCRTSVGVAVL- 381 (482)
Q Consensus 305 ~~~~d~~~~-~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~-~~~W~~~~~~~~~~r~~~~~~~~- 381 (482)
+++||+..+ .|..... .. .....+..++.||+... + ..+++||+. ...|+.. .+.+ . ..+.+..
T Consensus 80 l~~~d~~g~~~~~~~~~--~~-~~~~~~~~~~~l~v~t~-~-----~~l~~~d~~g~~~~~~~-~~~~--~-~~~~~~~~ 146 (330)
T 3hxj_A 80 VYAINPDGTEKWRFDTK--KA-IVSDFTIFEDILYVTSM-D-----GHLYAINTDGTEKWRFK-TKKA--I-YATPIVSE 146 (330)
T ss_dssp EEEECCCGGGGGGSCC--------CCEEEETTEEEEECT-T-----SEEEEECTTSCEEEEEE-CSSC--C-CSCCEECT
T ss_pred EEEECCCCcEEEEEECC--CC-cccCceEECCEEEEEec-C-----CEEEEEcCCCCEEEEEc-CCCc--e-eeeeEEcC
Confidence 889998433 3533211 11 11223334888887432 1 368999998 3347654 2211 1 1222333
Q ss_pred CCEEEEEeccCCCcccCeEEEEeCCCC-ceeec
Q psy11333 382 DGFLYAVGGQDGVQCLNHVERYDPKEN-KWSRV 413 (482)
Q Consensus 382 ~~~lyv~GG~~~~~~~~~~~~yd~~~~-~W~~~ 413 (482)
++.+|+.. . ...+.+||+... .|...
T Consensus 147 ~g~l~vgt-~-----~~~l~~~d~~g~~~~~~~ 173 (330)
T 3hxj_A 147 DGTIYVGS-N-----DNYLYAINPDGTEKWRFK 173 (330)
T ss_dssp TSCEEEEC-T-----TSEEEEECTTSCEEEEEE
T ss_pred CCEEEEEc-C-----CCEEEEECCCCCEeEEEe
Confidence 67777643 1 135788888722 36543
No 285
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=77.49 E-value=0.81 Score=42.82 Aligned_cols=64 Identities=14% Similarity=0.182 Sum_probs=32.1
Q ss_pred EECCEEEEEecCCCCCCCCeEEEEeCCCCc--eeecCCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCC-
Q psy11333 332 VLNDLLYAVGGHDGQSYLNSIERYDPQTNQ--WSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKEN- 408 (482)
Q Consensus 332 ~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~- 408 (482)
+.++.||+.+ .+ ..++++|..+++ |+.- . ... ..+.++.++++|+.|+.+ ..++++|.++.
T Consensus 7 v~~~~v~~gs-~d-----g~v~a~d~~tG~~~W~~~-~--~~~--~s~p~~~~g~~~v~~s~d-----g~l~a~d~~tG~ 70 (369)
T 2hz6_A 7 LPETLLFVST-LD-----GSLHAVSKRTGSIKWTLK-E--DPV--LQVPTHVEEPAFLPDPND-----GSLYTLGSKNNE 70 (369)
T ss_dssp -CTTEEEEEE-TT-----SEEEEEETTTCCEEEEEE-C--CCS--CCCC-----CCEEECTTT-----CCEEEC-----C
T ss_pred eeCCEEEEEc-CC-----CEEEEEECCCCCEEEEec-C--CCc--eecceEcCCCEEEEeCCC-----CEEEEEECCCCc
Confidence 3466677644 33 369999998775 8765 2 111 122244567788886543 35888998654
Q ss_pred -cee
Q psy11333 409 -KWS 411 (482)
Q Consensus 409 -~W~ 411 (482)
.|.
T Consensus 71 ~~w~ 74 (369)
T 2hz6_A 71 GLTK 74 (369)
T ss_dssp CSEE
T ss_pred eeee
Confidence 454
No 286
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=77.11 E-value=20 Score=32.35 Aligned_cols=141 Identities=11% Similarity=0.029 Sum_probs=73.5
Q ss_pred ceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCE-EEEEecC-----------------CCC----CCCCeEEEEeCC
Q psy11333 303 SSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDL-LYAVGGH-----------------DGQ----SYLNSIERYDPQ 358 (482)
Q Consensus 303 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~-iyv~GG~-----------------~~~----~~~~~~~~yd~~ 358 (482)
..++.+|..+.+...+...+. ...... +++ |++.... ++. .....++.+|..
T Consensus 85 ~~l~~~~~~~g~~~~l~~~~~----~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~ 160 (347)
T 2gop_A 85 SEIWVADLETLSSKKILEAKN----IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTE 160 (347)
T ss_dssp EEEEEEETTTTEEEEEEEESE----EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETT
T ss_pred ceEEEEECCCCceEEEEcCCC----ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECC
Confidence 468999998887665544322 222222 554 4444321 000 013568999999
Q ss_pred CCce-eecCCCCCCcccceeEE-EECCEEEEEeccCCCc---c-cCeEEEEeCCCCceeecCCCCCCccceEEEEECCE-
Q psy11333 359 TNQW-SCDVAPTTSCRTSVGVA-VLDGFLYAVGGQDGVQ---C-LNHVERYDPKENKWSRVAPMTTRRLGVAVAVLGGF- 431 (482)
Q Consensus 359 ~~~W-~~~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~---~-~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~- 431 (482)
+++. +.+ .. + ...... .-+| +++.+..+... . ...++.+| +.++..+..- .......-+|+
T Consensus 161 ~~~~~~~l-~~-~---~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~----~~~~~~spdg~~ 228 (347)
T 2gop_A 161 SEEVIEEF-EK-P---RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK----VSFYAVDSDGER 228 (347)
T ss_dssp TTEEEEEE-EE-E---TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE----ESEEEEEECSSC
T ss_pred CCeEEeee-cC-C---CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC----cceeeECCCCCE
Confidence 9887 666 33 2 222333 3345 66655443211 1 35788888 6677666432 11222244665
Q ss_pred EEEEcCCCC--CCCCCeEEEEeCCCCceeecC
Q psy11333 432 LYAIGGSDG--QSPLNTVERFDPKLNRWTAMA 461 (482)
Q Consensus 432 i~v~GG~~~--~~~~~~~~~y~~~~~~W~~~~ 461 (482)
|++.+.... ......++.+| +.++..+.
T Consensus 229 l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~ 258 (347)
T 2gop_A 229 ILLYGKPEKKYMSEHNKLYIYD--GKEVMGIL 258 (347)
T ss_dssp EEEEECCSSSCCCSSCEEEEEC--SSCEEESS
T ss_pred EEEEEccccCCccccceEEEEC--CCceEecc
Confidence 444443221 12346799998 56666554
No 287
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=76.51 E-value=49 Score=30.72 Aligned_cols=143 Identities=15% Similarity=0.144 Sum_probs=82.4
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccC--CCCCCCceeEEE--ECCEEEEEecCCCCCCCCeEEEEeCCCCce
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAP--MSKRRCGVGVAV--LNDLLYAVGGHDGQSYLNSIERYDPQTNQW 362 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~--~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 362 (482)
++.||+..- ....++++++.......+.. +..| .++++ .++.||+.-.. .+.++++++....-
T Consensus 127 ~~~ly~~D~-----~~~~I~r~~~~g~~~~~~~~~~~~~p---~glavd~~~g~lY~~d~~-----~~~I~~~~~dg~~~ 193 (386)
T 3v65_B 127 RELVFWSDV-----TLDRILRANLNGSNVEEVVSTGLESP---GGLAVDWVHDKLYWTDSG-----TSRIEVANLDGAHR 193 (386)
T ss_dssp TTEEEEEET-----TTTEEEEEETTSCCEEEEECSSCSCC---CCEEEETTTTEEEEEETT-----TTEEEECBTTSCSC
T ss_pred CCeEEEEeC-----CCCcEEEEecCCCCcEEEEeCCCCCc---cEEEEEeCCCeEEEEcCC-----CCeEEEEeCCCCce
Confidence 567777642 22578899998876654422 2222 24444 37899998643 24788999876654
Q ss_pred eec-CCCCCCcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE--CCEEEEEcC
Q psy11333 363 SCD-VAPTTSCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL--GGFLYAIGG 437 (482)
Q Consensus 363 ~~~-~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG 437 (482)
+.+ ...+..| .++++. ++.||+.--.. ...++++++....-..+..-.. ..-.++++- +++||+.-.
T Consensus 194 ~~l~~~~l~~P---~giavdp~~g~ly~td~~~----~~~I~r~~~dG~~~~~~~~~~~-~~PnGlavd~~~~~lY~aD~ 265 (386)
T 3v65_B 194 KVLLWQSLEKP---RAIALHPMEGTIYWTDWGN----TPRIEASSMDGSGRRIIADTHL-FWPNGLTIDYAGRRMYWVDA 265 (386)
T ss_dssp EEEECSSCSCE---EEEEEETTTTEEEEEECSS----SCEEEEEETTSCSCEEEECSSC-SCEEEEEEEGGGTEEEEEET
T ss_pred EEeecCCCCCC---cEEEEEcCCCeEEEeccCC----CCEEEEEeCCCCCcEEEEECCC-CCeeeEEEeCCCCEEEEEEC
Confidence 433 1222223 244444 68899885321 2578999987543333321111 111233332 789999854
Q ss_pred CCCCCCCCeEEEEeCCCC
Q psy11333 438 SDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 438 ~~~~~~~~~~~~y~~~~~ 455 (482)
. .+.|+++|....
T Consensus 266 ~-----~~~I~~~d~dG~ 278 (386)
T 3v65_B 266 K-----HHVIERANLDGS 278 (386)
T ss_dssp T-----TTEEEEECTTSC
T ss_pred C-----CCEEEEEeCCCC
Confidence 3 257999998644
No 288
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=76.05 E-value=25 Score=29.19 Aligned_cols=100 Identities=18% Similarity=0.235 Sum_probs=54.4
Q ss_pred EEEECCEEEEEecCCCCCCCCeEEEEeCCC----------CceeecCCCCCCcccceeEEEECCEEEEEeccCCCcccCe
Q psy11333 330 VAVLNDLLYAVGGHDGQSYLNSIERYDPQT----------NQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNH 399 (482)
Q Consensus 330 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~----------~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~ 399 (482)
++..+|.+|++-| +.+++++... ..|. .+|. .-.++....++++|.+-| +.
T Consensus 11 ~~~~~g~~~fFkg-------~~~w~~~~~~~~~gyP~~I~~~w~----glP~-~iDAa~~~~~g~~yfFkg-------~~ 71 (196)
T 3c7x_A 11 VAMLRGEMFVFKE-------RWFWRVRNNQVMDGYPMPIGQFWR----GLPA-SINTAYERKDGKFVFFKG-------DK 71 (196)
T ss_dssp EEEETTEEEEEET-------TEEEEEETTEECTTCSEEHHHHST----TCCS-SCCEEEECTTSCEEEEET-------TE
T ss_pred EEEcCCEEEEEEC-------CEEEEEECCccCCCCceEhhHhcc----CCCC-CccEEEEeCCCcEEEecC-------CE
Confidence 3467999999987 3567765431 1132 2332 122222224788999976 35
Q ss_pred EEEEeCCCCce---eecC----CCCCCccceEEEE-ECCEEEEEcCCCCCCCCCeEEEEeCCCC
Q psy11333 400 VERYDPKENKW---SRVA----PMTTRRLGVAVAV-LGGFLYAIGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 400 ~~~yd~~~~~W---~~~~----~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~y~~~~~ 455 (482)
.|+|+..+... ..+. .+|.....++... .++++|++-| +..++||..++
T Consensus 72 yw~~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG-------~~yw~yd~~~~ 128 (196)
T 3c7x_A 72 HWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG-------NKYYRFNEELR 128 (196)
T ss_dssp EEEEETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET-------TEEEEEETTTT
T ss_pred EEEEeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC-------CEEEEEeCCcc
Confidence 67776432110 0121 2332223332222 2689999988 36799998664
No 289
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=74.13 E-value=18 Score=32.53 Aligned_cols=143 Identities=6% Similarity=-0.113 Sum_probs=73.2
Q ss_pred CCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEE
Q psy11333 301 AISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVA 379 (482)
Q Consensus 301 ~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~ 379 (482)
....++.+|..+.+-..+ ......... +|+..++...........++.+|..+++...+ ...+. ..+..
T Consensus 41 ~~~~l~~~d~~~~~~~~l------~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l-~~~~~---~~~~~ 110 (347)
T 2gop_A 41 YENTIVIENLKNNARRFI------ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKI-LEAKN---IRSLE 110 (347)
T ss_dssp EEEEEEEEETTTCCEEEE------ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEE-EEESE---EEEEE
T ss_pred ccceEEEEeCCCCceEEc------ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEE-EcCCC---cccee
Confidence 345789999988876554 111222222 55433333322111234689999998887766 32222 11222
Q ss_pred -EECCEEEEEeccC------------------CC----cccCeEEEEeCCCCce-eecCCCCCCccceEEEEE-CCEEEE
Q psy11333 380 -VLDGFLYAVGGQD------------------GV----QCLNHVERYDPKENKW-SRVAPMTTRRLGVAVAVL-GGFLYA 434 (482)
Q Consensus 380 -~~~~~lyv~GG~~------------------~~----~~~~~~~~yd~~~~~W-~~~~~~~~~r~~~~~~~~-~~~i~v 434 (482)
.-+|+.++++... +. .....++.+|+.+.+. ..+.. + ........ +| +++
T Consensus 111 wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg-~~~ 185 (347)
T 2gop_A 111 WNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P---RFSSGIWHRDK-IVV 185 (347)
T ss_dssp ECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E---TTCEEEEETTE-EEE
T ss_pred ECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C---CcccccCCCCe-EEE
Confidence 2255544443321 00 0135688999988876 55544 2 23333333 45 665
Q ss_pred EcCCCCCC---C-CCeEEEEeCCCCceeec
Q psy11333 435 IGGSDGQS---P-LNTVERFDPKLNRWTAM 460 (482)
Q Consensus 435 ~GG~~~~~---~-~~~~~~y~~~~~~W~~~ 460 (482)
.+...+.. . ...++.+| +.++..+
T Consensus 186 ~~~~~~~~~~~~~~~~l~~~d--~~~~~~l 213 (347)
T 2gop_A 186 NVPHREIIPQYFKFWDIYIWE--DGKEEKM 213 (347)
T ss_dssp EEECCCSSCCSSCCEEEEEEE--TTEEEEE
T ss_pred EEecccccccccccccEEEeC--CCceEEe
Confidence 55443221 1 45788888 5566554
No 290
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=73.92 E-value=53 Score=29.93 Aligned_cols=165 Identities=16% Similarity=0.152 Sum_probs=91.4
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccC--CCCCCCceeEEE--ECCEEEEEecCCCCCCCCeEEEEeCCCCce
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAP--MSKRRCGVGVAV--LNDLLYAVGGHDGQSYLNSIERYDPQTNQW 362 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~--~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 362 (482)
++.||+..- ....++++++.....+.+.. +..| .++++ .++.||+.-.. .+.++++++....-
T Consensus 84 ~~~ly~~D~-----~~~~I~r~~~~g~~~~~~~~~~~~~p---~glavd~~~g~ly~~d~~-----~~~I~~~~~dG~~~ 150 (349)
T 3v64_C 84 RELVFWSDV-----TLDRILRANLNGSNVEEVVSTGLESP---GGLAVDWVHDKLYWTDSG-----TSRIEVANLDGAHR 150 (349)
T ss_dssp TTEEEEEET-----TTTEEEEEETTSCSCEEEECSSCSCC---CEEEEETTTTEEEEEETT-----TTEEEEEETTSCSC
T ss_pred ccEEEEEec-----cCCceEEEecCCCCceEEEeCCCCCc---cEEEEecCCCeEEEEcCC-----CCeEEEEcCCCCce
Confidence 567777642 22568888888776544322 2222 34455 37899988643 25799999886654
Q ss_pred eec-CCCCCCcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccc-eEEEEE--CCEEEEEc
Q psy11333 363 SCD-VAPTTSCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLG-VAVAVL--GGFLYAIG 436 (482)
Q Consensus 363 ~~~-~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~-~~~~~~--~~~i~v~G 436 (482)
+.+ ...+..| .++++. ++.||+.--.. ...++++++....-+.+.. ..... .++++- +++||+.-
T Consensus 151 ~~l~~~~l~~P---~~iavdp~~g~ly~td~~~----~~~I~r~~~dG~~~~~~~~--~~~~~PnGla~d~~~~~lY~aD 221 (349)
T 3v64_C 151 KVLLWQSLEKP---RAIALHPMEGTIYWTDWGN----TPRIEASSMDGSGRRIIAD--THLFWPNGLTIDYAGRRMYWVD 221 (349)
T ss_dssp EEEECTTCSCE---EEEEEETTTTEEEEEECSS----SCEEEEEETTSCSCEESCC--SSCSCEEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCCc---ceEEEecCcCeEEEeccCC----CCEEEEEeCCCCCcEEEEE--CCCCCcceEEEeCCCCEEEEEE
Confidence 433 1223333 244554 68999885321 2578999887544333322 11222 233333 67999985
Q ss_pred CCCCCCCCCeEEEEeCCCCceeecCCCCcCCCceeEEEEcCCC
Q psy11333 437 GSDGQSPLNTVERFDPKLNRWTAMAPMSTRRKHLGCAVFVGDN 479 (482)
Q Consensus 437 G~~~~~~~~~~~~y~~~~~~W~~~~~~~~~r~~~~~~~~~~~~ 479 (482)
.. .+.|+++|+....-..+.... ...-.++++.++.+
T Consensus 222 ~~-----~~~I~~~~~dG~~~~~~~~~~-~~~P~giav~~~~l 258 (349)
T 3v64_C 222 AK-----HHVIERANLDGSHRKAVISQG-LPHPFAITVFEDSL 258 (349)
T ss_dssp TT-----TTEEEEEETTSCSCEEEECSS-CSSEEEEEEETTEE
T ss_pred CC-----CCEEEEEeCCCCceEEEEeCC-CCCceEEEEECCEE
Confidence 43 257999998754323322211 11223555555543
No 291
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=73.67 E-value=48 Score=29.32 Aligned_cols=132 Identities=16% Similarity=0.291 Sum_probs=66.2
Q ss_pred CcEEEEeccccCCCCCceeEEEeCC-CCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCC-cee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQ-SSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTN-QWS 363 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~-~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~ 363 (482)
++.||+... -..++.||+. ...|....+.+ ...+.+.. ++.||+.. .+ ..+++||+... .|+
T Consensus 107 ~~~l~v~t~------~~~l~~~d~~g~~~~~~~~~~~---~~~~~~~~~~g~l~vgt-~~-----~~l~~~d~~g~~~~~ 171 (330)
T 3hxj_A 107 EDILYVTSM------DGHLYAINTDGTEKWRFKTKKA---IYATPIVSEDGTIYVGS-ND-----NYLYAINPDGTEKWR 171 (330)
T ss_dssp TTEEEEECT------TSEEEEECTTSCEEEEEECSSC---CCSCCEECTTSCEEEEC-TT-----SEEEEECTTSCEEEE
T ss_pred CCEEEEEec------CCEEEEEcCCCCEEEEEcCCCc---eeeeeEEcCCCEEEEEc-CC-----CEEEEECCCCCEeEE
Confidence 677776532 1358889988 33565432211 11222333 67777633 21 46899999822 266
Q ss_pred ecCCCCCCcccceeEEE-ECCEEEEEeccCCCcccCeEEEEeCCC-CceeecCCCCCCccceEEEEE-CCEEEEEcCCCC
Q psy11333 364 CDVAPTTSCRTSVGVAV-LDGFLYAVGGQDGVQCLNHVERYDPKE-NKWSRVAPMTTRRLGVAVAVL-GGFLYAIGGSDG 440 (482)
Q Consensus 364 ~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~-~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~ 440 (482)
.- .+ .... .+.+. .++.||+.. ..+.+||... ..|......+ . ..+++.. +|.||+....
T Consensus 172 ~~-~~--~~~~-~~~~~d~~g~l~v~t--------~~l~~~d~~g~~~~~~~~~~~--~-~~~~~~~~~g~l~v~t~~-- 234 (330)
T 3hxj_A 172 FK-TN--DAIT-SAASIGKDGTIYFGS--------DKVYAINPDGTEKWNFYAGYW--T-VTRPAISEDGTIYVTSLD-- 234 (330)
T ss_dssp EE-CS--SCCC-SCCEECTTCCEEEES--------SSEEEECTTSCEEEEECCSSC--C-CSCCEECTTSCEEEEETT--
T ss_pred Ee-cC--CCce-eeeEEcCCCEEEEEe--------CEEEEECCCCcEEEEEccCCc--c-eeceEECCCCeEEEEcCC--
Confidence 44 22 1111 22233 467888764 3477888442 3465443211 1 1222223 4467765321
Q ss_pred CCCCCeEEEEeCCC
Q psy11333 441 QSPLNTVERFDPKL 454 (482)
Q Consensus 441 ~~~~~~~~~y~~~~ 454 (482)
..+++||+..
T Consensus 235 ----~gl~~~~~~g 244 (330)
T 3hxj_A 235 ----GHLYAINPDG 244 (330)
T ss_dssp ----TEEEEECTTS
T ss_pred ----CeEEEECCCC
Confidence 2466666543
No 292
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=73.29 E-value=76 Score=31.45 Aligned_cols=151 Identities=13% Similarity=0.097 Sum_probs=80.7
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeee-ccCCCC---CCCc--eeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCC
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKI-VAPMSK---RRCG--VGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQT 359 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~-~~~~~~---~~~~--~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~ 359 (482)
++.+++.|+.+ ..+..+|..+.+... +..... .... .+++.. ++...+.||.+ .++..||..+
T Consensus 201 dg~~las~s~D-----~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D-----~~v~lWd~~~ 270 (611)
T 1nr0_A 201 DGSLFASTGGD-----GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD-----KTIKIWNVAT 270 (611)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTT
T ss_pred CCCEEEEEECC-----CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC-----CeEEEEeCCC
Confidence 56666666643 357788877765432 211100 1111 122222 67777888865 4789999998
Q ss_pred CceeecCCCCCC-cccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCEEEEEcC
Q psy11333 360 NQWSCDVAPTTS-CRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGFLYAIGG 437 (482)
Q Consensus 360 ~~W~~~~~~~~~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG 437 (482)
.+.... -+... .......+..++..++.++.++ .+..||+.+.+-..... .......+++.. +++.++.|+
T Consensus 271 ~~~~~~-~~~~~~~~~~~~~~~~~~~~l~s~s~d~-----~i~~~~~~~~~~~~~~~-gh~~~v~~l~~spdg~~l~s~s 343 (611)
T 1nr0_A 271 LKVEKT-IPVGTRIEDQQLGIIWTKQALVSISANG-----FINFVNPELGSIDQVRY-GHNKAITALSSSADGKTLFSAD 343 (611)
T ss_dssp TEEEEE-EECCSSGGGCEEEEEECSSCEEEEETTC-----CEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEE
T ss_pred Cceeee-ecCCCCccceeEEEEEcCCEEEEEeCCC-----cEEEEeCCCCCcceEEc-CCCCCEEEEEEeCCCCEEEEEe
Confidence 876543 11111 1112223344677777776543 46678877654322111 111112222222 677777877
Q ss_pred CCCCCCCCeEEEEeCCCCceee
Q psy11333 438 SDGQSPLNTVERFDPKLNRWTA 459 (482)
Q Consensus 438 ~~~~~~~~~~~~y~~~~~~W~~ 459 (482)
.++ .+..||..+.+...
T Consensus 344 ~D~-----~v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 344 AEG-----HINSWDISTGISNR 360 (611)
T ss_dssp TTS-----CEEEEETTTCCEEE
T ss_pred CCC-----cEEEEECCCCceee
Confidence 653 68889987765433
No 293
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=72.59 E-value=28 Score=33.04 Aligned_cols=143 Identities=12% Similarity=0.049 Sum_probs=77.7
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-CC-EEEEEecCCCCCCCCeEEEEeCCCCcee-
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-ND-LLYAVGGHDGQSYLNSIERYDPQTNQWS- 363 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~- 363 (482)
++.||+.--. ..+.++|+.+++...+.. ......++++- ++ .||+....++ .....+..++.. ..|.
T Consensus 149 ~g~Lyv~d~~------~~I~~id~~~~~v~~~~~--~~~~P~~ia~d~~G~~lyvad~~~~-~~~~~v~~~~~~-g~~~~ 218 (430)
T 3tc9_A 149 HNHLYLVGEQ------HPTRLIDFEKEYVSTVYS--GLSKVRTICWTHEADSMIITNDQNN-NDRPNNYILTRE-SGFKV 218 (430)
T ss_dssp EEEEEEEEBT------EEEEEEETTTTEEEEEEC--CCSCEEEEEECTTSSEEEEEECCSC-TTSEEEEEEEGG-GTSCS
T ss_pred CCeEEEEeCC------CcEEEEECCCCEEEEEec--CCCCcceEEEeCCCCEEEEEeCCCC-cccceEEEEeCC-Cceee
Confidence 4788888531 689999999988766544 11222334442 44 4998864332 122346666654 3343
Q ss_pred --ecCCCCCCcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCE-EEEEcC
Q psy11333 364 --CDVAPTTSCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGF-LYAIGG 437 (482)
Q Consensus 364 --~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~-i~v~GG 437 (482)
.+ +... ..+++++. ++.||+.--. ...+++||+.+..-..+...+....-..++.. +++ ||+.--
T Consensus 219 ~~~l-~~~~---~p~giavdp~~g~lyv~d~~-----~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 219 ITEL-TKGQ---NCNGAETHPINGELYFNSWN-----AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp EEEE-EECS---SCCCEEECTTTCCEEEEETT-----TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred eeee-ccCC---CceEEEEeCCCCEEEEEECC-----CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEEC
Confidence 22 2222 22344443 6889988532 25799999987654333322221111233333 454 998854
Q ss_pred CCCCCCCCeEEEEeCC
Q psy11333 438 SDGQSPLNTVERFDPK 453 (482)
Q Consensus 438 ~~~~~~~~~~~~y~~~ 453 (482)
.+ +.|++|+..
T Consensus 290 ~~-----~~I~~~~~d 300 (430)
T 3tc9_A 290 NQ-----HYILRSDYD 300 (430)
T ss_dssp TT-----TEEEEEEEE
T ss_pred CC-----CEEEEEeCC
Confidence 32 567776654
No 294
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=72.46 E-value=70 Score=31.59 Aligned_cols=150 Identities=13% Similarity=0.000 Sum_probs=77.7
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE-----CC-EEEEEecCCCCCCCCeEEEEeCCCC
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL-----ND-LLYAVGGHDGQSYLNSIERYDPQTN 360 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~~~yd~~~~ 360 (482)
+..+|+.+. ...+..+|+...+-+.+..++.+....+++.. +| .+|+..-. .+++.++|..+.
T Consensus 208 Gr~lyv~~~------dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~-----~~~v~ViD~~t~ 276 (567)
T 1qks_A 208 GRYLFVIGR------DGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYW-----PPQYVIMDGETL 276 (567)
T ss_dssp SCEEEEEET------TSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEE-----TTEEEEEETTTC
T ss_pred CCEEEEEcC------CCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEcc-----CCeEEEEECCCC
Confidence 457777542 14699999952222333333333333344554 45 56665432 357889998776
Q ss_pred ceeec-C-CCC--------CCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-C
Q psy11333 361 QWSCD-V-APT--------TSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-G 429 (482)
Q Consensus 361 ~W~~~-~-~~~--------~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~ 429 (482)
+=... . ..+ |.+|...-.+..++..+++--. ....++..|..+.+...+..++.++..+..... +
T Consensus 277 ~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~----~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pd 352 (567)
T 1qks_A 277 EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK----ETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGS 352 (567)
T ss_dssp CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET----TTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTT
T ss_pred cEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec----CCCeEEEEecCCCccceeeeeeccccccCceECCC
Confidence 53221 0 111 1223222222223333333211 134678888877666555555666666665544 4
Q ss_pred CE-EEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 430 GF-LYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 430 ~~-i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
++ +|+.... .+.+.++|.++.+
T Consensus 353 gr~~~va~~~-----sn~V~ViD~~t~k 375 (567)
T 1qks_A 353 HRYFITAANA-----RNKLVVIDTKEGK 375 (567)
T ss_dssp SCEEEEEEGG-----GTEEEEEETTTTE
T ss_pred CCEEEEEeCC-----CCeEEEEECCCCc
Confidence 44 4444322 3679999998875
No 295
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=72.32 E-value=67 Score=32.72 Aligned_cols=146 Identities=13% Similarity=0.091 Sum_probs=82.2
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCCeeeccC--CCCCCCceeEEE--ECCEEEEEecCCCCCCCCeEEEEeCCCCc
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAP--MSKRRCGVGVAV--LNDLLYAVGGHDGQSYLNSIERYDPQTNQ 361 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~--~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 361 (482)
.++.||+.-. ....|.++++....-..+.. +..|+ ++++ .++.||+..-. ....++++++....
T Consensus 463 ~~g~LY~tD~-----~~~~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td~~----~~~~I~~~~~dG~~ 530 (699)
T 1n7d_A 463 IHSNIYWTDS-----VLGTVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVD 530 (699)
T ss_dssp SSSBCEECCT-----TTSCEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECCCS----SSCCEEBCCSSSCC
T ss_pred eCCcEEEEec-----cCCeEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEcccC----CCCeEEEEeCCCCC
Confidence 4577887642 23468888888765444322 33333 3444 36788876411 12468888876554
Q ss_pred eeecC-CCCCCcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCC-CCccceEEEEECCEEEEEcC
Q psy11333 362 WSCDV-APTTSCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMT-TRRLGVAVAVLGGFLYAIGG 437 (482)
Q Consensus 362 W~~~~-~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~r~~~~~~~~~~~i~v~GG 437 (482)
-+.+. ..+..| .++++. +++||+.-.. .+.++++|+....-..+...+ ......++++.++.||+.-.
T Consensus 531 ~~~l~~~~l~~P---nGlavd~~~~~LY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~ 602 (699)
T 1n7d_A 531 IYSLVTENIQWP---NGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDI 602 (699)
T ss_dssp CCEESCSSCSSC---CCEEECTTTCCEEEEETT-----TTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECS
T ss_pred eeEEEeCCCCCc---cEEEEeccCCEEEEEecC-----CCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeC
Confidence 33331 112212 244443 6899998642 357889998654333333221 11223455667889999863
Q ss_pred CCCCCCCCeEEEEeCCCCc
Q psy11333 438 SDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 438 ~~~~~~~~~~~~y~~~~~~ 456 (482)
.+ +.|.++|+.+.+
T Consensus 603 ~~-----~~V~~~d~~~G~ 616 (699)
T 1n7d_A 603 IN-----EAIFSANRLTGS 616 (699)
T ss_dssp TT-----TCEEEEETTTEE
T ss_pred CC-----CeEEEEEccCCC
Confidence 32 578899876543
No 296
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=71.70 E-value=63 Score=30.82 Aligned_cols=67 Identities=18% Similarity=0.131 Sum_probs=38.0
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCC----Ceeecc---CC----CCCCCceeEEE-ECCEEEEE--ecCCCCCCCCeE
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSS----DWKIVA---PM----SKRRCGVGVAV-LNDLLYAV--GGHDGQSYLNSI 352 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~----~W~~~~---~~----~~~~~~~~~~~-~~~~iyv~--GG~~~~~~~~~~ 352 (482)
.+.+|+-|.. .+.++++|..++ +-...- .+ ...+ -|.+.. -++ |||. |+.++ .....+
T Consensus 95 r~~l~v~~l~-----s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~-Ph~~~~~pdG-i~Vs~~g~~~g-~~~g~v 166 (462)
T 2ece_A 95 RRFLIVPGLR-----SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSR-LHTVHCGPDA-IYISALGNEEG-EGPGGI 166 (462)
T ss_dssp SCEEEEEBTT-----TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEE-EEEEEECSSC-EEEEEEEETTS-CSCCEE
T ss_pred CCEEEEccCC-----CCeEEEEECCCCCCCceeeeeechhhcccccCCCc-ccceeECCCe-EEEEcCCCcCC-CCCCeE
Confidence 4677777763 367999998766 222111 01 1112 233333 355 8775 33222 345789
Q ss_pred EEEeCCCCc
Q psy11333 353 ERYDPQTNQ 361 (482)
Q Consensus 353 ~~yd~~~~~ 361 (482)
..+|++|.+
T Consensus 167 ~vlD~~T~~ 175 (462)
T 2ece_A 167 LMLDHYSFE 175 (462)
T ss_dssp EEECTTTCC
T ss_pred EEEECCCCe
Confidence 999999876
No 297
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=71.41 E-value=24 Score=38.02 Aligned_cols=144 Identities=10% Similarity=-0.066 Sum_probs=73.3
Q ss_pred eeEEEeCCCCCeeeccCCCCCCCceeEEEECCEEEEEecCCCCCCCCeEE-EEeCCCCceeecCCCCCCcccceeEEEEC
Q psy11333 304 SVERYDPQSSDWKIVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIE-RYDPQTNQWSCDVAPTTSCRTSVGVAVLD 382 (482)
Q Consensus 304 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~-~yd~~~~~W~~~~~~~~~~r~~~~~~~~~ 382 (482)
.++.++..+.....+..-+..+....+.. +++.+++++. ...++ .||..+.+.+.+ .. ...........-+
T Consensus 318 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~-----~~~l~~~~d~~~~~~~~l-~~-~~~~~~~~~~SpD 389 (1045)
T 1k32_A 318 QAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR-----EGDFLGIYDYRTGKAEKF-EE-NLGNVFAMGVDRN 389 (1045)
T ss_dssp EEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET-----TEEEEEEEETTTCCEEEC-CC-CCCSEEEEEECTT
T ss_pred EEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC-----CCceEEEEECCCCCceEe-cC-CccceeeeEECCC
Confidence 56667766655444322111011111112 5544444432 24688 899988877766 31 1111112222336
Q ss_pred CEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEECCEEEEEcCCCC-----CCCCCeEEEEeCCCCce
Q psy11333 383 GFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVLGGFLYAIGGSDG-----QSPLNTVERFDPKLNRW 457 (482)
Q Consensus 383 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~-----~~~~~~~~~y~~~~~~W 457 (482)
|+.+++++.. ..++.||+.+.+-..+..-...........-+|+.+++++.++ ......+++||..+.+.
T Consensus 390 G~~la~~~~~-----~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~ 464 (1045)
T 1k32_A 390 GKFAVVANDR-----FEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI 464 (1045)
T ss_dssp SSEEEEEETT-----SEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEE
T ss_pred CCEEEEECCC-----CeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcE
Confidence 7766666542 3788999988876655422222222222233666555554322 11235789999887765
Q ss_pred eec
Q psy11333 458 TAM 460 (482)
Q Consensus 458 ~~~ 460 (482)
..+
T Consensus 465 ~~l 467 (1045)
T 1k32_A 465 FAA 467 (1045)
T ss_dssp EEC
T ss_pred EEe
Confidence 444
No 298
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=71.03 E-value=28 Score=34.80 Aligned_cols=143 Identities=15% Similarity=0.108 Sum_probs=72.0
Q ss_pred CCCcEEEEeccccCCCCCceeEEEeCCCC-Cee--ec----cCCCCCCCceeEEE-ECCEEEEEecCCCCCCCCeEEEEe
Q psy11333 285 RRGEVLFAVGGWCSGDAISSVERYDPQSS-DWK--IV----APMSKRRCGVGVAV-LNDLLYAVGGHDGQSYLNSIERYD 356 (482)
Q Consensus 285 ~~~~~l~~~GG~~~~~~~~~~~~~d~~~~-~W~--~~----~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd 356 (482)
...+++|++-| +.+|+++.... ... .+ +.+|. ...++... .++++|++-| +..++|+
T Consensus 451 ~~rg~~yfFKg-------~~yWr~~~~~~~~~~P~~Is~~wp~LP~-~IDAA~~~~~~~k~yFFkG-------~~yWry~ 515 (631)
T 1ck7_A 451 QIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPE-KIDAVYEAPQEEKAVFFAG-------NEYWIYS 515 (631)
T ss_dssp ECSSSEEEECS-------SEEEEESCTTSCCEEEEEGGGTCTTSCS-SCSBCCEETTTTEEEEEET-------TEEEEEE
T ss_pred ecCCcEEEEcC-------CEEEEEcCCCCCCCCceeccccCCCCCc-cceEEEEECCCCEEEEEec-------CEEEEEC
Confidence 35788898877 35677766542 111 11 12332 12222222 2678999977 4688888
Q ss_pred CCCCc--e-eecCC-CCCCcccceeEE-E--ECCEEEEEeccCCCcccCeEEEEeCCCCceee-----cC-C-CCCCccc
Q psy11333 357 PQTNQ--W-SCDVA-PTTSCRTSVGVA-V--LDGFLYAVGGQDGVQCLNHVERYDPKENKWSR-----VA-P-MTTRRLG 422 (482)
Q Consensus 357 ~~~~~--W-~~~~~-~~~~~r~~~~~~-~--~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~-----~~-~-~~~~r~~ 422 (482)
..+.. + +.+.. ..|......-++ . .++++|.+-| +..++||..+.+=.. +. . +..|...
T Consensus 516 ~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG-------~~ywryd~~~~~vd~gYPk~i~~~w~G~p~~i 588 (631)
T 1ck7_A 516 ASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAWNAIPDNL 588 (631)
T ss_dssp TTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEET-------TEEEEEETTTTEECTTCCEETTTSCSSCCTTC
T ss_pred CCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEEC-------CEEEEEcCCcccccCCCCcchHhhcCCCCCCC
Confidence 53210 1 01100 011100011122 2 3689999976 468888876542111 11 0 1122223
Q ss_pred eEEEEEC--CEEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 423 VAVAVLG--GFLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 423 ~~~~~~~--~~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
-++...+ |++|++-|. ..|+||..+.+
T Consensus 589 DAAf~~~~~g~~YFFkG~-------~Ywr~d~~~~~ 617 (631)
T 1ck7_A 589 DAVVDLQGGGHSYFFKGA-------YYLKLENQSLK 617 (631)
T ss_dssp CEEECCTTSCBCEEEETT-------EEECCBTTBTT
T ss_pred cEeEEEcCCCeEEEEECC-------EEEEEeCccce
Confidence 3444443 799999883 56888876543
No 299
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=70.91 E-value=59 Score=29.21 Aligned_cols=150 Identities=11% Similarity=0.084 Sum_probs=79.0
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccC-CCCCCC-ceeEEEECCEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAP-MSKRRC-GVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~-~~~~~~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
.+.+|++|.. ..+++-.-..++|+.+.. .+.+.. ..++...++.+|++|.. ..+++-+-.-.+|+.
T Consensus 46 ~~~~~~~G~~------g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~------g~i~~S~DgG~tW~~ 113 (327)
T 2xbg_A 46 RHHGWLVGVN------ATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEP------PIMLHTTDGGQSWSQ 113 (327)
T ss_dssp SSCEEEEETT------TEEEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEET------TEEEEESSTTSSCEE
T ss_pred CCcEEEEcCC------CeEEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECC------CeEEEECCCCCCceE
Confidence 4677876531 135655555679988753 222222 23344457788887632 245554434678998
Q ss_pred cCCCCCCcccceeEE-EECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCEEEEEcCCCCCC
Q psy11333 365 DVAPTTSCRTSVGVA-VLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGFLYAIGGSDGQS 442 (482)
Q Consensus 365 ~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~ 442 (482)
+..+.+.+-....++ .-++.+|+.|.. + .+++-+-.-.+|+.+..... ...+.++.. ++.+++.|.. +
T Consensus 114 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~-g-----~v~~S~DgG~tW~~~~~~~~-~~~~~~~~~~~~~~~~~g~~-G-- 183 (327)
T 2xbg_A 114 IPLDPKLPGSPRLIKALGNGSAEMITNV-G-----AIYRTKDSGKNWQALVQEAI-GVMRNLNRSPSGEYVAVSSR-G-- 183 (327)
T ss_dssp CCCCTTCSSCEEEEEEEETTEEEEEETT-C-----CEEEESSTTSSEEEEECSCC-CCEEEEEECTTSCEEEEETT-S--
T ss_pred CccccCCCCCeEEEEEECCCCEEEEeCC-c-----cEEEEcCCCCCCEEeecCCC-cceEEEEEcCCCcEEEEECC-C--
Confidence 822211222223333 346888887742 1 24443333568998875332 233444433 5667766532 2
Q ss_pred CCCeEEEEeCC-CCceeecC
Q psy11333 443 PLNTVERFDPK-LNRWTAMA 461 (482)
Q Consensus 443 ~~~~~~~y~~~-~~~W~~~~ 461 (482)
.+++-+-. ..+|+.+.
T Consensus 184 ---~~~~S~d~gG~tW~~~~ 200 (327)
T 2xbg_A 184 ---SFYSTWEPGQTAWEPHN 200 (327)
T ss_dssp ---SEEEEECTTCSSCEEEE
T ss_pred ---cEEEEeCCCCCceeECC
Confidence 34444322 56788774
No 300
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=70.89 E-value=32 Score=32.25 Aligned_cols=115 Identities=17% Similarity=0.154 Sum_probs=63.6
Q ss_pred eEEE-ECCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCC
Q psy11333 329 GVAV-LNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKE 407 (482)
Q Consensus 329 ~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~ 407 (482)
++++ -++.||+.... ...+.++|+.+++-+.+......++ .+....++.||+...... ..++.+|+.+
T Consensus 135 ~la~d~~g~lyv~d~~-----~~~I~~id~~~g~~~~~~~~~~~~~--ia~~~~g~~l~~~d~~~~----~~I~~~d~~~ 203 (409)
T 3hrp_A 135 GIAAVGNNTVLAYQRD-----DPRVRLISVDDNKVTTVHPGFKGGK--PAVTKDKQRVYSIGWEGT----HTVYVYMKAS 203 (409)
T ss_dssp EEEECSTTEEEEEETT-----TTEEEEEETTTTEEEEEEETCCBCB--CEECTTSSEEEEEBSSTT----CEEEEEEGGG
T ss_pred EEEEeCCCCEEEEecC-----CCcEEEEECCCCEEEEeeccCCCCc--eeEecCCCcEEEEecCCC----ceEEEEEcCC
Confidence 4444 37889998753 2579999999887665512211221 222222456776654221 2788998865
Q ss_pred Cc-eeecCCC-C-CCccceEEEEE--CCEEEEEcCCCCCCCCCeEEEEeCCCCceeec
Q psy11333 408 NK-WSRVAPM-T-TRRLGVAVAVL--GGFLYAIGGSDGQSPLNTVERFDPKLNRWTAM 460 (482)
Q Consensus 408 ~~-W~~~~~~-~-~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~y~~~~~~W~~~ 460 (482)
.. ...+... + .....+++++. ++.||+..+ + ..+++||+.+.....+
T Consensus 204 ~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~-~-----~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 204 GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS-N-----KNFGRFNVKTQEVTLI 255 (409)
T ss_dssp TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT-T-----CEEEEEETTTCCEEEE
T ss_pred CceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC-C-----CcEEEEECCCCCEEEE
Confidence 42 2233111 1 11222333333 678999432 2 4799999987765554
No 301
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=70.60 E-value=59 Score=29.05 Aligned_cols=167 Identities=12% Similarity=0.127 Sum_probs=88.4
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCC----CCeeec-c-CCCCCCCceeEEE--ECCEEEEEecCCCCCCCCeEEEEeCC
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQS----SDWKIV-A-PMSKRRCGVGVAV--LNDLLYAVGGHDGQSYLNSIERYDPQ 358 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~----~~W~~~-~-~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~ 358 (482)
++.||+.... ...++++++.+ .....+ + .+..| .++++ .++.||+.-.. .+.++++|+.
T Consensus 41 ~~~ly~~D~~-----~~~I~~~~~~g~~~~~~~~~~~~~~~~~p---~glavd~~~~~ly~~d~~-----~~~I~~~~~~ 107 (316)
T 1ijq_A 41 SNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDIQAP---DGLAVDWIHSNIYWTDSV-----LGTVSVADTK 107 (316)
T ss_dssp TTEEEEEETT-----TTEEEEEEC--------CEEEECSSCSCC---CEEEEETTTTEEEEEETT-----TTEEEEEETT
T ss_pred CCEEEEEECC-----CCcEEEEECCCCCCCcccEEEEeCCCCCc---CEEEEeecCCeEEEEECC-----CCEEEEEeCC
Confidence 5788887542 35788999876 222222 1 22222 35555 47899998542 3578999988
Q ss_pred CCceeec-CCCCCCcccceeEEE--ECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE--CCEEE
Q psy11333 359 TNQWSCD-VAPTTSCRTSVGVAV--LDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL--GGFLY 433 (482)
Q Consensus 359 ~~~W~~~-~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~ 433 (482)
...-+.+ ...+..| .++++ .++.||+..... ...++++++....-+.+..-.. ..-.++++- +++||
T Consensus 108 g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~~----~~~I~~~~~dG~~~~~~~~~~~-~~P~gla~d~~~~~lY 179 (316)
T 1ijq_A 108 GVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWGT----PAKIKKGGLNGVDIYSLVTENI-QWPNGITLDLLSGRLY 179 (316)
T ss_dssp SSSEEEEEECTTCCE---EEEEEETTTTEEEEEECSS----SCEEEEEETTSCCEEEEECSSC-SCEEEEEEETTTTEEE
T ss_pred CCceEEEEECCCCCc---ceEEeCCCCCEEEEEccCC----CCeEEEEcCCCCCeEEEEECCC-CCceEEEEeccCCEEE
Confidence 6554433 1223333 24444 378999885311 2578899886543333321111 112233443 67999
Q ss_pred EEcCCCCCCCCCeEEEEeCCCCceeecCCCC-cCCCceeEEEEcCCC
Q psy11333 434 AIGGSDGQSPLNTVERFDPKLNRWTAMAPMS-TRRKHLGCAVFVGDN 479 (482)
Q Consensus 434 v~GG~~~~~~~~~~~~y~~~~~~W~~~~~~~-~~r~~~~~~~~~~~~ 479 (482)
+.-.. .+.|+++|.....-+.+...+ ....-.++++.++++
T Consensus 180 ~~D~~-----~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~l 221 (316)
T 1ijq_A 180 WVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKV 221 (316)
T ss_dssp EEETT-----TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEE
T ss_pred EEECC-----CCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEE
Confidence 98643 257999998754333332211 112234566655443
No 302
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=70.59 E-value=36 Score=34.69 Aligned_cols=146 Identities=12% Similarity=0.172 Sum_probs=75.4
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCC----Ceeec-c-CCCCCCCceeEEE--ECCEEEEEecCCCCCCCCeEEEEeCC
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSS----DWKIV-A-PMSKRRCGVGVAV--LNDLLYAVGGHDGQSYLNSIERYDPQ 358 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~----~W~~~-~-~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~ 358 (482)
++.||+.-. ....|+++++.+. .-..+ . .+.. ..++++ .++.||+.-.. .+.++++++.
T Consensus 417 ~~~Ly~sD~-----~~~~I~~~~~~g~~~~~~~~~~i~~~~~~---P~glavD~~~g~LY~tD~~-----~~~I~v~d~d 483 (699)
T 1n7d_A 417 SNRIYWSDL-----SQRMICSTQLDRAHGVSSYDTVISRDIQA---PDGLAVDWIHSNIYWTDSV-----LGTVSVADTK 483 (699)
T ss_dssp TTEEEECCT-----TTTSBEEEESCCCCC-CCCCCBCCSCC-----CCCEECCCSSSBCEECCTT-----TSCEEEEBSS
T ss_pred cCeEEEEec-----CCCeEEEEecCCCCCCcceEEEEeCCCCC---cceEEEEeeCCcEEEEecc-----CCeEEEEecC
Confidence 456776632 1246777887651 11111 1 1112 224444 46789986422 3568999988
Q ss_pred CCceeecC-CCCCCcccceeEEE--ECCEEEEEeccCCCcccCeEEEEeCCCCceeecC--CCCCCccceEEEEE--CCE
Q psy11333 359 TNQWSCDV-APTTSCRTSVGVAV--LDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVA--PMTTRRLGVAVAVL--GGF 431 (482)
Q Consensus 359 ~~~W~~~~-~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~r~~~~~~~~--~~~ 431 (482)
...-+.+. ..+..|+ ++++ .++.||+..-. ....++++++....-..+. .+..|+ ++++- +++
T Consensus 484 g~~~~~l~~~~~~~P~---giavDp~~g~ly~td~~----~~~~I~~~~~dG~~~~~l~~~~l~~Pn---Glavd~~~~~ 553 (699)
T 1n7d_A 484 GVKRKTLFREQGSKPR---AIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVDIYSLVTENIQWPN---GITLDLLSGR 553 (699)
T ss_dssp SCCEEEECCCSSCCCC---CEECCSSSSCCEECCCS----SSCCEEBCCSSSCCCCEESCSSCSSCC---CEEECTTTCC
T ss_pred CCceEEEEeCCCCCcc---eEEEccCCCcEEEcccC----CCCeEEEEeCCCCCeeEEEeCCCCCcc---EEEEeccCCE
Confidence 76555441 1223332 3343 36788877421 1246777777544333322 222221 23332 578
Q ss_pred EEEEcCCCCCCCCCeEEEEeCCCCceeec
Q psy11333 432 LYAIGGSDGQSPLNTVERFDPKLNRWTAM 460 (482)
Q Consensus 432 i~v~GG~~~~~~~~~~~~y~~~~~~W~~~ 460 (482)
||+.-.. .+.|+++++....-..+
T Consensus 554 LY~aD~~-----~~~I~~~d~dG~~~~~~ 577 (699)
T 1n7d_A 554 LYWVDSK-----LHSISSIDVNGGNRKTI 577 (699)
T ss_dssp EEEEETT-----TTEEEEECSSSSCCEEE
T ss_pred EEEEecC-----CCeEEEEccCCCceEEE
Confidence 9988643 25789998865443333
No 303
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=70.50 E-value=1e+02 Score=31.67 Aligned_cols=98 Identities=18% Similarity=0.177 Sum_probs=55.2
Q ss_pred CceeEEEeCCCC--Ce--eeccCCCCCCCceeEE-EECCEEEEEecCCCCCCCCeEEEEeCCC-Cceee-cCCCCCCccc
Q psy11333 302 ISSVERYDPQSS--DW--KIVAPMSKRRCGVGVA-VLNDLLYAVGGHDGQSYLNSIERYDPQT-NQWSC-DVAPTTSCRT 374 (482)
Q Consensus 302 ~~~~~~~d~~~~--~W--~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~-~~W~~-~~~~~~~~r~ 374 (482)
.+.++.+|..+. .+ ..+.+-.. ...++.. ..++.||+....++ .....++.+|..+ ..|+. +.+. .....
T Consensus 294 ~~~l~~~d~~~~~~~~~~~~l~~~~~-~~~~s~~~~~g~~l~~~t~~~~-a~~~~L~~~d~~~~~~~~~~li~~-~~~~~ 370 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAHNTLEIVRPREK-GVRYDVQMHGTSHLVILTNEGG-AVNHKLLIAPRGQPSDWSHVLVDH-SEDVF 370 (751)
T ss_dssp CEEEEEEESSSCTTCCCEEESSCCCT-TCCEEEEEETTTEEEEEECTTT-CTTCEEEEEETTSTTCCCCEEECC-CSSEE
T ss_pred CceEEEEECCCCCCCceeEEeecCCC-CceEEEeeeeCCEEEEEeCCCC-CCCcEEEEEcCCCcccceeeEECC-CCCcE
Confidence 457888998775 45 44432111 1112222 23778888865441 1234789999876 68987 5132 21222
Q ss_pred ceeEEEECCEEEEEeccCCCcccCeEEEEeC
Q psy11333 375 SVGVAVLDGFLYAVGGQDGVQCLNHVERYDP 405 (482)
Q Consensus 375 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~ 405 (482)
..+....++.|++....++ ...++.+|+
T Consensus 371 l~~~~~~~~~lv~~~~~~g---~~~l~~~dl 398 (751)
T 2xe4_A 371 MESIAVRSNYLVVAGRRAG---LTRIWTMMA 398 (751)
T ss_dssp EEEEEECSSEEEEEEEETT---EEEEEEEEC
T ss_pred EEEEEEECCEEEEEEEeCC---EEEEEEEec
Confidence 2334445778877765443 346888886
No 304
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=70.27 E-value=1.2e+02 Score=32.65 Aligned_cols=164 Identities=16% Similarity=0.144 Sum_probs=86.7
Q ss_pred EeccccCCCCCceeEEEeCCCCCee-eccC----CCCCCCceeEEEE---CCEEEEEecCCCCCCCCeEEEEeCCCCcee
Q psy11333 292 AVGGWCSGDAISSVERYDPQSSDWK-IVAP----MSKRRCGVGVAVL---NDLLYAVGGHDGQSYLNSIERYDPQTNQWS 363 (482)
Q Consensus 292 ~~GG~~~~~~~~~~~~~d~~~~~W~-~~~~----~~~~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 363 (482)
++|.-......-.++.|++....|- .... +...-.++++++. +...+|+|.... .....|+.|......|+
T Consensus 347 ~~GapG~~~w~G~v~~~~~~~~~~~~~~~~~~~~~~~sylGySVa~~~~~g~~~~v~GAP~~-~~~G~V~i~~~~~~~~~ 425 (1095)
T 3k6s_A 347 VLGAVGSFTWSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAPRY-QHTGKAVIFTQVSRQWR 425 (1095)
T ss_dssp EEEESCSTTTTBEEEECCSSSCCEEECCCSSCCCCCSCCBTSSEECCCCSSSCEEEEEETTG-GGTCEEEEEECCTTTCC
T ss_pred eEcccccCCccceeEEecCCCcceeeccccccccccccccceeeEEeccCCceEEEEEcccc-cccceEEEEEecCCcce
Confidence 6664322223335777877665542 2211 2222235555542 234577775432 23457899988888898
Q ss_pred ec---CCCCCCcccceeEEEEC------CEEEEEeccCC--CcccCeEEEEeCCC--CceeecCCC------CCCccceE
Q psy11333 364 CD---VAPTTSCRTSVGVAVLD------GFLYAVGGQDG--VQCLNHVERYDPKE--NKWSRVAPM------TTRRLGVA 424 (482)
Q Consensus 364 ~~---~~~~~~~r~~~~~~~~~------~~lyv~GG~~~--~~~~~~~~~yd~~~--~~W~~~~~~------~~~r~~~~ 424 (482)
.. ...-.....++++++.| .-++++|.-.. ....-.++.|.-.. ..|.....+ +..|++.+
T Consensus 426 ~~~~~~g~~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~~~~G~Vyvy~~~~~~~~~~~~~~l~g~~~~~~~~FG~s 505 (1095)
T 3k6s_A 426 MKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAVLYGEQGHPWGRFGAA 505 (1095)
T ss_dssp EEEEECCSSTTSCTTSCEEEECSSSSSSCCEEEEECSSCCSSCCCBCEEEEECCSSTTCCCSCSSCCCCCSCSSCCBTSC
T ss_pred EEeecccCcccCcCCceEEEEEeCCCCCccEEEECCccccCcCCCCEEEEEEeCCCCcceeeeEEeecccCCccccCccc
Confidence 64 12222234556666642 35777775211 12234677875443 358643322 35678888
Q ss_pred EEEECC-------EEEEEcCCCCCCCCCeEEEEeCCCC-ce
Q psy11333 425 VAVLGG-------FLYAIGGSDGQSPLNTVERFDPKLN-RW 457 (482)
Q Consensus 425 ~~~~~~-------~i~v~GG~~~~~~~~~~~~y~~~~~-~W 457 (482)
++.++| -| ++|.-........+++|.-..+ .|
T Consensus 506 va~~gD~NgDG~~Dl-~VGAP~~~~~~G~vyi~~g~~~~g~ 545 (1095)
T 3k6s_A 506 LTVLGDVNGDKLTDV-VIGAPGEEENRGAVYLFHGVLGPSI 545 (1095)
T ss_dssp EEEEECSSSSSCCEE-EEECTTTTTSCCBEEEEEBCSSSCB
T ss_pred eEeecccCCCCCcCE-EEeCCcCCCCCCEEEEecCCCCCCc
Confidence 877522 25 4443222234567999987765 55
No 305
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=69.18 E-value=11 Score=34.21 Aligned_cols=94 Identities=14% Similarity=0.140 Sum_probs=50.5
Q ss_pred eEEEEeCCCCceeecCCCCCCcccceeEE-EECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCC-CCccceEEEEE
Q psy11333 351 SIERYDPQTNQWSCDVAPTTSCRTSVGVA-VLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMT-TRRLGVAVAVL 428 (482)
Q Consensus 351 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~r~~~~~~~~ 428 (482)
.++.+|+.+++++.+ ...........++ .-+|++|+.+..++ ...+..||+.+.+++.+.... .......++..
T Consensus 19 ~v~~~d~~tg~~~~~-~~~~~~~~p~~~a~spdg~l~~~~~~~~---~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~s 94 (347)
T 3hfq_A 19 YQGTLDTTAKTLTND-GLLAATQNPTYLALSAKDCLYSVDKEDD---EGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVD 94 (347)
T ss_dssp EEEEEETTTTEEEEE-EEEEECSCCCCEEECTTCEEEEEEEETT---EEEEEEEEEETTEEEEEEEEEEESCCCSEEEEE
T ss_pred EEEEEcCCCCeEEEe-eeeeccCCcceEEEccCCeEEEEEecCC---CceEEEEEecCCcEEEeeeeecCCCCCEEEEEC
Confidence 467788888888764 2111111112233 23688887764221 246889998877776665422 11222233333
Q ss_pred -CC-EEEEEcCCCCCCCCCeEEEEeCC
Q psy11333 429 -GG-FLYAIGGSDGQSPLNTVERFDPK 453 (482)
Q Consensus 429 -~~-~i~v~GG~~~~~~~~~~~~y~~~ 453 (482)
++ .||+.+..+ ..+.+|+..
T Consensus 95 pdg~~l~~~~~~~-----~~v~v~~~~ 116 (347)
T 3hfq_A 95 EARQLVYSANYHK-----GTAEVMKIA 116 (347)
T ss_dssp TTTTEEEEEETTT-----TEEEEEEEC
T ss_pred CCCCEEEEEeCCC-----CEEEEEEeC
Confidence 55 466665332 467777764
No 306
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=68.30 E-value=44 Score=28.24 Aligned_cols=102 Identities=18% Similarity=0.177 Sum_probs=54.5
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCC--e-eeccC--CCCCCCceeEEE---ECCEEEEEecCCCCCCCCeEEEEeCC
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSD--W-KIVAP--MSKRRCGVGVAV---LNDLLYAVGGHDGQSYLNSIERYDPQ 358 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~--W-~~~~~--~~~~~~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~yd~~ 358 (482)
++++|++-| +..|+||..+.. + +.+.. +|......-+|. -++++|++-| +..++||..
T Consensus 87 ~~k~yfFkG-------~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG-------~~ywr~d~~ 152 (218)
T 1gen_A 87 EEKAVFFAG-------NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEV 152 (218)
T ss_dssp TTEEEEEET-------TEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET-------TEEEEEETT
T ss_pred CCEEEEEeC-------CEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC-------CEEEEEECc
Confidence 578999977 567888853211 0 11111 221111222333 2689999987 468899987
Q ss_pred CCceeecC----C--CCCCcccceeEEEEC--CEEEEEeccCCCcccCeEEEEeCCCCc
Q psy11333 359 TNQWSCDV----A--PTTSCRTSVGVAVLD--GFLYAVGGQDGVQCLNHVERYDPKENK 409 (482)
Q Consensus 359 ~~~W~~~~----~--~~~~~r~~~~~~~~~--~~lyv~GG~~~~~~~~~~~~yd~~~~~ 409 (482)
+++-.... . -+..+..--++...+ |.+|.+-| +..++||..+..
T Consensus 153 ~~~v~~gyPr~i~~~w~g~p~~idaAf~~~~~g~~YfFkg-------~~y~~~~~~~~~ 204 (218)
T 1gen_A 153 KKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKG-------AYYLKLENQSLK 204 (218)
T ss_dssp TTEECSSCCEEHHHHSSSCCSSCSEEEECTTTCEEEEEET-------TEEEEEETTEEE
T ss_pred cccccCCCCcchhhccCCCCCCCCEEEEEcCCCcEEEEEC-------CEEEEEECCcee
Confidence 66321100 0 001112222444444 89999976 457778776443
No 307
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=68.05 E-value=8.6 Score=38.11 Aligned_cols=98 Identities=12% Similarity=-0.055 Sum_probs=54.4
Q ss_pred EEEeCCCCCeeeccCCCCCCCceeEEEECCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEECCEE
Q psy11333 306 ERYDPQSSDWKIVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFL 385 (482)
Q Consensus 306 ~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~l 385 (482)
..||..+.+...+...+. ...+..-+|+..++++.+... ..+++.+|..+++++.+ ...+... ......-+|+.
T Consensus 135 ~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~-~~~i~~~d~~~g~~~~l-~~~~~~~-~~~~~SpDG~~ 208 (582)
T 3o4h_A 135 ALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGG-RVSLFTSNLSSGGLRVF-DSGEGSF-SSASISPGMKV 208 (582)
T ss_dssp EEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETT-EEEEEEEETTTCCCEEE-CCSSCEE-EEEEECTTSCE
T ss_pred eEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCC-CeEEEEEcCCCCCceEe-ecCCCcc-ccceECCCCCE
Confidence 366887776655543222 222222466655555443211 24599999999998887 3322211 11222336665
Q ss_pred EEEeccCCCcccCeEEEEeCCCCceee
Q psy11333 386 YAVGGQDGVQCLNHVERYDPKENKWSR 412 (482)
Q Consensus 386 yv~GG~~~~~~~~~~~~yd~~~~~W~~ 412 (482)
++.+..++ ...++.||+.+.+...
T Consensus 209 l~~~~~~~---~~~i~~~d~~~~~~~~ 232 (582)
T 3o4h_A 209 TAGLETAR---EARLVTVDPRDGSVED 232 (582)
T ss_dssp EEEEECSS---CEEEEEECTTTCCEEE
T ss_pred EEEccCCC---eeEEEEEcCCCCcEEE
Confidence 55443322 2478999999887773
No 308
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=67.99 E-value=22 Score=30.36 Aligned_cols=63 Identities=16% Similarity=0.081 Sum_probs=36.6
Q ss_pred EECCEEEEEeccCCCcccCeEEEEe--CC-------------CCceeecCCCCCCccceEEEEE--CCEEEEEcCCCCCC
Q psy11333 380 VLDGFLYAVGGQDGVQCLNHVERYD--PK-------------ENKWSRVAPMTTRRLGVAVAVL--GGFLYAIGGSDGQS 442 (482)
Q Consensus 380 ~~~~~lyv~GG~~~~~~~~~~~~yd--~~-------------~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~ 442 (482)
..+|++|++-| +..|+|+ +. ++.|..++.-..+..--++... ++++|++-|
T Consensus 70 ~~~g~~~fFKg-------~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~IDAA~~~~~~~k~yfFkG----- 137 (227)
T 3lp9_A 70 TENNEAFIFYE-------NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGIDAAYRSTRGKEVYLFKG----- 137 (227)
T ss_dssp CSTTEEEEEET-------TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCSEEEECSSTTEEEEEET-----
T ss_pred CCCCEEEEEeC-------CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCCCcccEEEEECCCCEEEEEEC-----
Confidence 36899999977 3466666 21 2234444321112222233333 689999988
Q ss_pred CCCeEEEEeCCCCc
Q psy11333 443 PLNTVERFDPKLNR 456 (482)
Q Consensus 443 ~~~~~~~y~~~~~~ 456 (482)
+..|+||..+++
T Consensus 138 --~~yw~~d~~~~~ 149 (227)
T 3lp9_A 138 --DQYARIDYGSNS 149 (227)
T ss_dssp --TEEEEEETTTTE
T ss_pred --CEEEEEeCCCcc
Confidence 468999976543
No 309
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=67.74 E-value=74 Score=29.31 Aligned_cols=105 Identities=13% Similarity=0.071 Sum_probs=58.9
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCC--e-eeccC--CCCCCCceeEEE-E--CCEEEEEecCCCCCCCCeEEEEeCC
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSD--W-KIVAP--MSKRRCGVGVAV-L--NDLLYAVGGHDGQSYLNSIERYDPQ 358 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~--W-~~~~~--~~~~~~~~~~~~-~--~~~iyv~GG~~~~~~~~~~~~yd~~ 358 (482)
++++|++-| +.+|+|+..... + ..+.. +|..-..--+++ . ++++|++-| +..++||..
T Consensus 236 ~g~~~fFkg-------~~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG-------~~yw~yd~~ 301 (365)
T 3ba0_A 236 RNQVFLFKD-------DKYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD-------NQYWRYDER 301 (365)
T ss_dssp GTEEEEEET-------TEEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETT
T ss_pred CCEEEEEeC-------CEEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCC
Confidence 688999977 457777754321 1 12322 232111223333 3 579999987 468999987
Q ss_pred CCceeecCC-C-----CCCcccceeEEEE-CCEEEEEeccCCCcccCeEEEEeCCCCceee
Q psy11333 359 TNQWSCDVA-P-----TTSCRTSVGVAVL-DGFLYAVGGQDGVQCLNHVERYDPKENKWSR 412 (482)
Q Consensus 359 ~~~W~~~~~-~-----~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 412 (482)
+++-..-.| + +..+..--++... ++++|.+-| +..++||..+.+-..
T Consensus 302 ~~~v~~gyPk~I~~~f~g~p~~iDaA~~~~~g~~YfFkg-------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 302 RQMMDPGYPKLITKNFQGIGPKIDAVFYSKNKYYYFFQG-------SNQFEYDFLLQRITK 355 (365)
T ss_dssp TTEECSSCCCCHHHHSTTCCSSCSEEEEETTTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred cceecCCCCcchhhcCCCCCCccceeeEecCCcEEEEeC-------CEEEEEECCccEEec
Confidence 654221100 0 0111122234444 889999976 468899988766543
No 310
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=67.35 E-value=69 Score=28.58 Aligned_cols=146 Identities=12% Similarity=0.082 Sum_probs=83.4
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCCeeecc--CCCCCCCceeEEE--ECCEEEEEecCCCCCCCCeEEEEeCCCCc
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVA--PMSKRRCGVGVAV--LNDLLYAVGGHDGQSYLNSIERYDPQTNQ 361 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~--~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 361 (482)
.++.||+.-. ....+.++|+....-..+. .+..| .++++ .++.||+.... ....++++++....
T Consensus 87 ~~~~ly~~d~-----~~~~I~~~~~~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~----~~~~I~~~~~dG~~ 154 (316)
T 1ijq_A 87 IHSNIYWTDS-----VLGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVD 154 (316)
T ss_dssp TTTEEEEEET-----TTTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECS----SSCEEEEEETTSCC
T ss_pred cCCeEEEEEC-----CCCEEEEEeCCCCceEEEEECCCCCc---ceEEeCCCCCEEEEEccC----CCCeEEEEcCCCCC
Confidence 4678888743 1257888888765433332 23333 24444 37899987531 12579999987654
Q ss_pred eeecCCCCCCcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCC-CCCccceEEEEECCEEEEEcCC
Q psy11333 362 WSCDVAPTTSCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPM-TTRRLGVAVAVLGGFLYAIGGS 438 (482)
Q Consensus 362 W~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-~~~r~~~~~~~~~~~i~v~GG~ 438 (482)
-+.+ .... .....++++. +++||+.-.. .+.++++|+....-..+... .....-.++++.++.+|+.-..
T Consensus 155 ~~~~-~~~~-~~~P~gla~d~~~~~lY~~D~~-----~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~ 227 (316)
T 1ijq_A 155 IYSL-VTEN-IQWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII 227 (316)
T ss_dssp EEEE-ECSS-CSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETT
T ss_pred eEEE-EECC-CCCceEEEEeccCCEEEEEECC-----CCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECC
Confidence 3333 1111 1122345554 6899998542 35789999875433333221 1122234566678899998633
Q ss_pred CCCCCCCeEEEEeCCCC
Q psy11333 439 DGQSPLNTVERFDPKLN 455 (482)
Q Consensus 439 ~~~~~~~~~~~y~~~~~ 455 (482)
+ +.|.++|+.+.
T Consensus 228 ~-----~~V~~~~~~~g 239 (316)
T 1ijq_A 228 N-----EAIFSANRLTG 239 (316)
T ss_dssp T-----TEEEEEETTTC
T ss_pred C-----CeEEEEeCCCC
Confidence 2 56888887544
No 311
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=67.03 E-value=69 Score=28.46 Aligned_cols=137 Identities=14% Similarity=0.089 Sum_probs=74.3
Q ss_pred ceeEEEeCCCCCeeeccCCC------------------CCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCce
Q psy11333 303 SSVERYDPQSSDWKIVAPMS------------------KRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQW 362 (482)
Q Consensus 303 ~~~~~~d~~~~~W~~~~~~~------------------~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 362 (482)
..+++||+.++++....... ....-++++.- ++.|||.... ..+.++|+.++..
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~------~~i~~~d~~~g~~ 113 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY------YHLSVVGSEGGHA 113 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT------TEEEEECTTCEEC
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC------CCEEEEeCCCCEE
Confidence 46889999887765432110 01123455555 5789987432 2488999987766
Q ss_pred eecCCCCCC--c-ccceeEEEE--CCEEEEEeccCC------------CcccCeEEEEeCCCCceeecC-CCCCCccceE
Q psy11333 363 SCDVAPTTS--C-RTSVGVAVL--DGFLYAVGGQDG------------VQCLNHVERYDPKENKWSRVA-PMTTRRLGVA 424 (482)
Q Consensus 363 ~~~~~~~~~--~-r~~~~~~~~--~~~lyv~GG~~~------------~~~~~~~~~yd~~~~~W~~~~-~~~~~r~~~~ 424 (482)
+.+ ..... + .....+++. +|.+|+.-.... ......+++||+.+.+...+. .+..| .+
T Consensus 114 ~~~-~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p---~g 189 (322)
T 2fp8_A 114 TQL-ATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVP---GG 189 (322)
T ss_dssp EEE-ESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCC---CE
T ss_pred EEe-cccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccC---cc
Confidence 555 21111 1 112233433 578998753210 011246899999877665432 11111 23
Q ss_pred EEEE-CC-EEEEEcCCCCCCCCCeEEEEeCCC
Q psy11333 425 VAVL-GG-FLYAIGGSDGQSPLNTVERFDPKL 454 (482)
Q Consensus 425 ~~~~-~~-~i~v~GG~~~~~~~~~~~~y~~~~ 454 (482)
++.. ++ .||+.-.. .+.|++|++..
T Consensus 190 ia~~~dg~~lyv~d~~-----~~~I~~~~~~~ 216 (322)
T 2fp8_A 190 AEVSADSSFVLVAEFL-----SHQIVKYWLEG 216 (322)
T ss_dssp EEECTTSSEEEEEEGG-----GTEEEEEESSS
T ss_pred eEECCCCCEEEEEeCC-----CCeEEEEECCC
Confidence 3333 33 57877332 14688888764
No 312
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=66.85 E-value=41 Score=29.68 Aligned_cols=110 Identities=12% Similarity=0.033 Sum_probs=55.8
Q ss_pred EEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcc-cceeEEE-ECC-EEEEEeccCCCcccCeEEEEeCCCCceeec
Q psy11333 337 LYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCR-TSVGVAV-LDG-FLYAVGGQDGVQCLNHVERYDPKENKWSRV 413 (482)
Q Consensus 337 iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r-~~~~~~~-~~~-~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 413 (482)
+++.++.+ ..+..||+.+.+-... -+.+... ....++. -++ .+|+.++.+ ..+..||+.+.+-...
T Consensus 3 ~~v~~~~~-----~~v~~~d~~~~~~~~~-~~~~~~~~~~~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~~~ 71 (337)
T 1pby_B 3 YILAPARP-----DKLVVIDTEKMAVDKV-ITIADAGPTPMVPMVAPGGRIAYATVNKS-----ESLVKIDLVTGETLGR 71 (337)
T ss_dssp EEEEEETT-----TEEEEEETTTTEEEEE-EECTTCTTCCCCEEECTTSSEEEEEETTT-----TEEEEEETTTCCEEEE
T ss_pred EEEEcCCC-----CeEEEEECCCCcEEEE-EEcCCCCCCccceEEcCCCCEEEEEeCCC-----CeEEEEECCCCCeEee
Confidence 45555543 4799999988765433 1222210 0122232 244 677776532 4689999987764332
Q ss_pred CCCCCC----ccceEEEEE-CC-EEEEEcCCC---CCC---CCCeEEEEeCCCCce
Q psy11333 414 APMTTR----RLGVAVAVL-GG-FLYAIGGSD---GQS---PLNTVERFDPKLNRW 457 (482)
Q Consensus 414 ~~~~~~----r~~~~~~~~-~~-~i~v~GG~~---~~~---~~~~~~~y~~~~~~W 457 (482)
-..+.+ .....++.. ++ .+|+..+.. ... ....+.+||+.+.+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~ 127 (337)
T 1pby_B 72 IDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR 127 (337)
T ss_dssp EECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE
T ss_pred EEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcE
Confidence 222110 012223333 44 677764210 000 126799999987654
No 313
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=66.83 E-value=1.2e+02 Score=31.29 Aligned_cols=131 Identities=14% Similarity=0.105 Sum_probs=73.5
Q ss_pred ceeEEEeCCCCCeeecc--CCCCCCCceeEEE--ECCEEEEEecCCCCCCCCeEEEEeCCCCceeec-CCCCCCccccee
Q psy11333 303 SSVERYDPQSSDWKIVA--PMSKRRCGVGVAV--LNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCD-VAPTTSCRTSVG 377 (482)
Q Consensus 303 ~~~~~~d~~~~~W~~~~--~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~~~~~~~r~~~~ 377 (482)
..|+++++....-..+. .+..|+ ++++ .++.||+.--. ....|++.++....-+.+ ...+.. -.+
T Consensus 493 ~~I~v~~ldG~~~~~l~~~~l~~P~---gIaVDp~~g~LYwtD~g----~~~~I~~~~~dG~~~~~lv~~~l~~---P~G 562 (791)
T 3m0c_C 493 GTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVDIYSLVTENIQW---PNG 562 (791)
T ss_dssp TEEEEEETTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEECS----SSCEEEEEETTSCCEEEEECSSCSC---EEE
T ss_pred CeEEEEeCCCCeEEEEEeCCCCCcc---eEEEecCCCCEEEecCC----CCCeEEEEecCCCceEEEEeCCCCC---ceE
Confidence 45667776655544332 233332 4555 36899987511 125799999876654444 112222 234
Q ss_pred EEEE--CCEEEEEeccCCCcccCeEEEEeCCCCceeec-CCCCCCccceEEEEECCEEEEEcCCCCCCCCCeEEEEeCC
Q psy11333 378 VAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWSRV-APMTTRRLGVAVAVLGGFLYAIGGSDGQSPLNTVERFDPK 453 (482)
Q Consensus 378 ~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y~~~ 453 (482)
+++- +++||+.-.. .+.++++|+....-..+ .....-....++++.+++||+.--.+ +.|+++|..
T Consensus 563 LavD~~~~~LYwaD~~-----~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~-----~~I~~~dk~ 631 (791)
T 3m0c_C 563 ITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIIN-----EAIFSANRL 631 (791)
T ss_dssp EEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTT-----TEEEEEETT
T ss_pred EEEecCCCeEEEEeCC-----CCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCC-----CEEEEEeCC
Confidence 5544 7899998532 35799999875433333 22111122346667899999986432 456666643
No 314
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=64.14 E-value=44 Score=28.27 Aligned_cols=93 Identities=19% Similarity=0.173 Sum_probs=51.7
Q ss_pred ECCEEEEEecCCCCCCCCeEEEEeCCCC---------ceeecCCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEE
Q psy11333 333 LNDLLYAVGGHDGQSYLNSIERYDPQTN---------QWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERY 403 (482)
Q Consensus 333 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~---------~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~y 403 (482)
.+|.+|++-| +..++++.... .|..+ |... -|+...++++|++-| +..|+|
T Consensus 27 ~~g~~yfFkg-------~~~Wr~~~~~~~~~p~~Is~~wpgL----P~~I--DAA~~~~~~~yfFkG-------~~yw~~ 86 (219)
T 1hxn_A 27 NHGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQWPQG----PSTV--DAAFSWEDKLYLIQD-------TKVYVF 86 (219)
T ss_dssp TTSCEEEEET-------TEEEESSSSSCTTCCEEGGGTCTTS----CSSC--SEEEEETTEEEEEET-------TEEEEE
T ss_pred CCCcEEEEeC-------CEEEEEcCCCCCCCceEhhhhccCC----CCCc--cEEEEECCcEEEecC-------CEEEEE
Confidence 4789999987 23555554332 24333 3221 233445899999976 467888
Q ss_pred eCCCCceeecC----------CCCCC--cc-ceEEEEE--CCEEEEEcCCCCCCCCCeEEEEeCC
Q psy11333 404 DPKENKWSRVA----------PMTTR--RL-GVAVAVL--GGFLYAIGGSDGQSPLNTVERFDPK 453 (482)
Q Consensus 404 d~~~~~W~~~~----------~~~~~--r~-~~~~~~~--~~~i~v~GG~~~~~~~~~~~~y~~~ 453 (482)
+..++ .+..+ .+|.. .. --++... ++++|++-| +..++||..
T Consensus 87 ~~~~~-~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~ 143 (219)
T 1hxn_A 87 LTKGG-YTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG-------RRLWWLDLK 143 (219)
T ss_dssp ECSSS-CEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET-------TEEEEEEGG
T ss_pred eCCCC-ceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC-------CEEEEEeCC
Confidence 75421 11111 23322 11 2223322 689999988 467999964
No 315
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=63.03 E-value=57 Score=28.95 Aligned_cols=141 Identities=12% Similarity=0.152 Sum_probs=66.2
Q ss_pred cEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCce-eEEE-ECCEEEEEecCCCCCCCCeEEEEeCCCCceeec
Q psy11333 288 EVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGV-GVAV-LNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCD 365 (482)
Q Consensus 288 ~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 365 (482)
+..++.|+.. ..+..+|..+.+-.. .+....... +++. -++.+.+.||.++ .+..||..+.+-...
T Consensus 166 ~~~l~s~~~d-----~~i~~wd~~~~~~~~--~~~~h~~~v~~~~~sp~g~~l~s~~~dg-----~i~iwd~~~~~~~~~ 233 (319)
T 3frx_A 166 SVTIISAGND-----KMVKAWNLNQFQIEA--DFIGHNSNINTLTASPDGTLIASAGKDG-----EIMLWNLAAKKAMYT 233 (319)
T ss_dssp CCEEEEEETT-----SCEEEEETTTTEEEE--EECCCCSCEEEEEECTTSSEEEEEETTC-----EEEEEETTTTEEEEE
T ss_pred ccEEEEEeCC-----CEEEEEECCcchhhe--eecCCCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCcEEEE
Confidence 3345555532 357778877654321 111111112 2222 2677888888663 689999987753222
Q ss_pred CCCCCCcccceeEEE-ECCEEEEEeccCCCcccCeEEEEeCCCCc-eeecCC-CC---CCcc--ceEEEE-ECCEEEEEc
Q psy11333 366 VAPTTSCRTSVGVAV-LDGFLYAVGGQDGVQCLNHVERYDPKENK-WSRVAP-MT---TRRL--GVAVAV-LGGFLYAIG 436 (482)
Q Consensus 366 ~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~-~~---~~r~--~~~~~~-~~~~i~v~G 436 (482)
-....+ -.+++. -++..++.+.. ..+..|+..+.. +..+.+ .. .... ..+++. -+|+.++.|
T Consensus 234 -~~~~~~--v~~~~~sp~~~~la~~~~------~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg 304 (319)
T 3frx_A 234 -LSAQDE--VFSLAFSPNRYWLAAATA------TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAG 304 (319)
T ss_dssp -EECCSC--EEEEEECSSSSEEEEEET------TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEE
T ss_pred -ecCCCc--EEEEEEcCCCCEEEEEcC------CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEe
Confidence 111111 122222 24555555432 234555554332 122221 11 0001 112222 277888888
Q ss_pred CCCCCCCCCeEEEEeCCC
Q psy11333 437 GSDGQSPLNTVERFDPKL 454 (482)
Q Consensus 437 G~~~~~~~~~~~~y~~~~ 454 (482)
+.++ .+.+||..+
T Consensus 305 ~~Dg-----~i~vWd~~t 317 (319)
T 3frx_A 305 YTDN-----VIRVWQVMT 317 (319)
T ss_dssp ETTS-----CEEEEEEEE
T ss_pred ecCc-----eEEEEEEee
Confidence 8764 577777653
No 316
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=62.88 E-value=75 Score=32.06 Aligned_cols=58 Identities=9% Similarity=-0.237 Sum_probs=33.4
Q ss_pred CceeEEEeCCCCCeeeccCCCCCC--CceeEEEECCEEEEEecCCCCCCCCeEEEEeCCCCceeec
Q psy11333 302 ISSVERYDPQSSDWKIVAPMSKRR--CGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCD 365 (482)
Q Consensus 302 ~~~~~~~d~~~~~W~~~~~~~~~~--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 365 (482)
...++.+|..+.+...+....... ....+..-+|+..+++.. .+++.+|..+++..++
T Consensus 90 ~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~------~~i~~~~~~~g~~~~~ 149 (723)
T 1xfd_A 90 TGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE------NNIYYCAHVGKQAIRV 149 (723)
T ss_dssp CSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET------TEEEEESSSSSCCEEE
T ss_pred eeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC------CeEEEEECCCCceEEE
Confidence 367899999988765554432211 111111225554444432 3688999888776665
No 317
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=61.89 E-value=89 Score=27.94 Aligned_cols=63 Identities=13% Similarity=0.121 Sum_probs=35.4
Q ss_pred CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEE-ECCEEEEEeccCCCcccCeEEEEeCCCC
Q psy11333 334 NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAV-LDGFLYAVGGQDGVQCLNHVERYDPKEN 408 (482)
Q Consensus 334 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~ 408 (482)
++.+.+.|+.+ .++..||..+.+.......... .-.+++. -+++.++.||.++ .+..||....
T Consensus 87 ~~~~l~s~s~D-----~~v~lwd~~~~~~~~~~~~h~~--~v~~v~~sp~~~~l~s~~~d~-----~i~~wd~~~~ 150 (343)
T 2xzm_R 87 ENCFAISSSWD-----KTLRLWDLRTGTTYKRFVGHQS--EVYSVAFSPDNRQILSAGAER-----EIKLWNILGE 150 (343)
T ss_dssp STTEEEEEETT-----SEEEEEETTSSCEEEEEECCCS--CEEEEEECSSTTEEEEEETTS-----CEEEEESSSC
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCcEEEEEcCCCC--cEEEEEECCCCCEEEEEcCCC-----EEEEEeccCC
Confidence 56677777765 4789999988764322011111 1112222 2567777777543 4677777543
No 318
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=61.81 E-value=1e+02 Score=28.65 Aligned_cols=168 Identities=11% Similarity=0.104 Sum_probs=86.5
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCC----CeeeccCCCCCCCceeEEE--ECCEEEEEecCCCCCCCCeEEEEeCCCC
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSS----DWKIVAPMSKRRCGVGVAV--LNDLLYAVGGHDGQSYLNSIERYDPQTN 360 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~----~W~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 360 (482)
++.||+... ....++++++... ....+..- ......++++ .++.||+.-.. ...++++++...
T Consensus 123 ~~~lywsD~-----~~~~I~~~~~~g~~~~~~~~~~~~~-~~~~p~glavD~~~~~lY~~d~~-----~~~I~~~~~~g~ 191 (400)
T 3p5b_L 123 SNRIYWSDL-----SQRMICSTQLDRAHGVSSYDTVISR-DIQAPDGLAVDWIHSNIYWTDSV-----LGTVSVADTKGV 191 (400)
T ss_dssp TTEEEEEET-----TTTEEEEEEC------CCCEEEECS-SCSCEEEEEEETTTTEEEEEETT-----TTEEEEECTTTC
T ss_pred cCceEEEec-----CCCeEEEEEcccCCCCCcceEEEeC-CCCCcccEEEEecCCceEEEECC-----CCeEEEEeCCCC
Confidence 466766632 1245777777652 12221110 1112234555 37899998643 257899999877
Q ss_pred ceeecC-CCCCCcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccc-eEEEEE--CCEEEE
Q psy11333 361 QWSCDV-APTTSCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLG-VAVAVL--GGFLYA 434 (482)
Q Consensus 361 ~W~~~~-~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~-~~~~~~--~~~i~v 434 (482)
.-+.+. ..+..| .++++. ++.||+.--. ....++++++....=..+.. ..... .++++- +++||+
T Consensus 192 ~~~~l~~~~~~~P---~~iavdp~~g~ly~td~~----~~~~I~~~~~dG~~~~~~~~--~~l~~P~glavd~~~~~lY~ 262 (400)
T 3p5b_L 192 KRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVDIYSLVT--ENIQWPNGITLDLLSGRLYW 262 (400)
T ss_dssp SEEEEEECSSCCE---EEEEEETTTTEEEEEECS----SSCCEEEEETTSCSCEEEEC--SSCSCEEEEEEETTTTEEEE
T ss_pred ceEEEEeCCCCCc---ceEEEecccCeEEEEeCC----CCCEEEEEeCCCCccEEEEE--CCCCceEEEEEEeCCCEEEE
Confidence 655441 223333 244553 6889988521 12468888876543222211 11112 233333 679999
Q ss_pred EcCCCCCCCCCeEEEEeCCCCceeecCCCC-cCCCceeEEEEcCCC
Q psy11333 435 IGGSDGQSPLNTVERFDPKLNRWTAMAPMS-TRRKHLGCAVFVGDN 479 (482)
Q Consensus 435 ~GG~~~~~~~~~~~~y~~~~~~W~~~~~~~-~~r~~~~~~~~~~~~ 479 (482)
.-.. .+.|+++|.+...-..+...+ .-....++++.++.+
T Consensus 263 aD~~-----~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~l 303 (400)
T 3p5b_L 263 VDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKV 303 (400)
T ss_dssp EETT-----TTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEE
T ss_pred EECC-----CCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEE
Confidence 8543 367999998754433332211 112233666666654
No 319
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=61.80 E-value=98 Score=28.43 Aligned_cols=86 Identities=12% Similarity=0.092 Sum_probs=48.4
Q ss_pred CCEEEEEeccCC----CcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCE--EEEEcCCCCCCCCCeEEEEeCCC
Q psy11333 382 DGFLYAVGGQDG----VQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGF--LYAIGGSDGQSPLNTVERFDPKL 454 (482)
Q Consensus 382 ~~~lyv~GG~~~----~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~--i~v~GG~~~~~~~~~~~~y~~~~ 454 (482)
++++|+...... ....+.++++|+.+.+- +..++.+....+++.. +|+ +|+..+.+ +++.+||+.+
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v--v~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~-----~~V~ViD~~t 350 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT--SSQISLGHDVDAISVAQDGGPDLYALSAGT-----EVLHIYDAGA 350 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEE--EEEEECCCCcCeEEECCCCCeEEEEEcCCC-----CeEEEEECCC
Confidence 578999754211 11246899999876643 3333444444444444 555 55543222 5899999875
Q ss_pred CceeecCC-CCcCCCceeEEEEc
Q psy11333 455 NRWTAMAP-MSTRRKHLGCAVFV 476 (482)
Q Consensus 455 ~~W~~~~~-~~~~r~~~~~~~~~ 476 (482)
. +.+.. .+.++.-+++...+
T Consensus 351 ~--~vv~~i~~vG~~P~~~~~~~ 371 (373)
T 2mad_H 351 G--DQDQSTVELGSGPQVLSVMN 371 (373)
T ss_pred C--CEEeeecCCCCCCcEEEEcc
Confidence 4 44545 34555555555443
No 320
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=61.08 E-value=58 Score=27.60 Aligned_cols=104 Identities=14% Similarity=0.098 Sum_probs=54.7
Q ss_pred ECCEEEEEecCCCCCCCCeEEEEe---------------CCCCceeecCCCCCCcccceeEEE--ECCEEEEEeccCCCc
Q psy11333 333 LNDLLYAVGGHDGQSYLNSIERYD---------------PQTNQWSCDVAPTTSCRTSVGVAV--LDGFLYAVGGQDGVQ 395 (482)
Q Consensus 333 ~~~~iyv~GG~~~~~~~~~~~~yd---------------~~~~~W~~~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~ 395 (482)
..|.+|++-| +-+++++ +.+..|..+ ++.+......-++. .+|++|++-|
T Consensus 12 ~~ge~~fFk~-------~~~wr~~~~~~~~~~~~~~~p~~I~~~Wp~L-P~~~f~~~~iDAa~~~~~g~~~fFkg----- 78 (225)
T 3oyo_A 12 SEYEVYFFAK-------NKYVRLHYTPGASSDTILTNLRLISSGFPSL-AGTPFAEPGIDCSFHTEASEAYVFSG----- 78 (225)
T ss_dssp STTEEEEEET-------TEEEEEECCTTCSCCEEEEEEEEHHHHCGGG-TTSTTTTTCCSEEEECSTTEEEEEET-----
T ss_pred CCCEEEEEEC-------CEEEEEecccccccCcccCCceehhhhcccC-CCccCCCCCEeEEEEcCCCeEEEEcC-----
Confidence 3788999877 2355555 123346555 32222112233333 5799999977
Q ss_pred ccCeEEEEeCCC----C-----------ceeecCCCCCCccceEEEE--ECCEEEEEcCCCCCCCCCeEEEEeCCCCcee
Q psy11333 396 CLNHVERYDPKE----N-----------KWSRVAPMTTRRLGVAVAV--LGGFLYAIGGSDGQSPLNTVERFDPKLNRWT 458 (482)
Q Consensus 396 ~~~~~~~yd~~~----~-----------~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~y~~~~~~W~ 458 (482)
+..|+||..+ + .|..++.-+....--++.. .++++|++-| +..|+||..+++..
T Consensus 79 --~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG-------~~yw~~d~~~~~~~ 149 (225)
T 3oyo_A 79 --NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG-------NKYVRIAYDSKQLV 149 (225)
T ss_dssp --TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET-------TEEEEEETTTTEEE
T ss_pred --CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC-------CeEEEEECCCCeec
Confidence 3567775422 1 2322221000001122222 2789999988 46789987665543
No 321
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=60.52 E-value=97 Score=27.95 Aligned_cols=64 Identities=17% Similarity=0.114 Sum_probs=37.6
Q ss_pred CCEEEEEeccCCCcccCe-EEEEeCCCCceeecCCCC-CCccceEEEEE-CCEEEEEcCCCCCCCCCeEEEEeCCCC
Q psy11333 382 DGFLYAVGGQDGVQCLNH-VERYDPKENKWSRVAPMT-TRRLGVAVAVL-GGFLYAIGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 382 ~~~lyv~GG~~~~~~~~~-~~~yd~~~~~W~~~~~~~-~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~y~~~~~ 455 (482)
++++++.|+.++ + +..||..+.+-...-... ......+++.. +++.++.|+.+ +.+.+||..+.
T Consensus 206 ~g~~l~s~s~d~-----~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~iw~~~~~ 272 (355)
T 3vu4_A 206 KSDMVATCSQDG-----TIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDK-----WTLHVFEIFND 272 (355)
T ss_dssp TSSEEEEEETTC-----SEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETT-----CEEEEEESSCC
T ss_pred CCCEEEEEeCCC-----CEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECC-----CEEEEEEccCC
Confidence 678888888653 4 788998866532211100 22222233333 67788888765 46888887543
No 322
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=59.87 E-value=90 Score=30.28 Aligned_cols=102 Identities=19% Similarity=0.185 Sum_probs=54.3
Q ss_pred CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEE-EECCEEEEEeccCCCcccCeEEEEeCCCCceee
Q psy11333 334 NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVA-VLDGFLYAVGGQDGVQCLNHVERYDPKENKWSR 412 (482)
Q Consensus 334 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 412 (482)
++...+.|+.+ ..+..||.....-..+ .....+ -.+++ .-++++++.|+.++ .+..||.....-..
T Consensus 437 d~~~l~~~~~d-----~~v~~w~~~~~~~~~~-~~~~~~--v~~~~~spd~~~las~~~d~-----~i~iw~~~~~~~~~ 503 (577)
T 2ymu_A 437 DDQTIASASDD-----KTVKLWNRNGQLLQTL-TGHSSS--VRGVAFSPDGQTIASASDDK-----TVKLWNRNGQLLQT 503 (577)
T ss_dssp TSSEEEEEETT-----SEEEEEETTSCEEEEE-ECCSSC--EEEEEECTTSCEEEEEETTS-----EEEEEETTSCEEEE
T ss_pred CCCEEEEEcCC-----CEEEEEECCCCEEEEE-cCCCCC--EEEEEEcCCCCEEEEEeCCC-----EEEEEcCCCCEEEE
Confidence 66777777754 3688899765544444 221111 11222 23678888887543 57778864332222
Q ss_pred cCCCCCCccceEEEEE-CCEEEEEcCCCCCCCCCeEEEEeCCCC
Q psy11333 413 VAPMTTRRLGVAVAVL-GGFLYAIGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 413 ~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~y~~~~~ 455 (482)
+.... ....+++.. ++++++.||.+ ..+.+||....
T Consensus 504 ~~~h~--~~v~~l~~s~dg~~l~s~~~d-----g~v~lwd~~~~ 540 (577)
T 2ymu_A 504 LTGHS--SSVRGVAFSPDGQTIASASDD-----KTVKLWNRNGQ 540 (577)
T ss_dssp EECCS--SCEEEEEECTTSSCEEEEETT-----SEEEEECTTSC
T ss_pred EeCCC--CCEEEEEEcCCCCEEEEEECc-----CEEEEEeCCCC
Confidence 22111 111222222 67777777765 36788886543
No 323
>3v4v_A Integrin alpha-4; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_A*
Probab=59.79 E-value=1.4e+02 Score=29.61 Aligned_cols=153 Identities=12% Similarity=0.088 Sum_probs=83.4
Q ss_pred CceeEEEECCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCC----CCcccceeEEEE--C--C-EEEEEeccCCCcc
Q psy11333 326 CGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPT----TSCRTSVGVAVL--D--G-FLYAVGGQDGVQC 396 (482)
Q Consensus 326 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~----~~~r~~~~~~~~--~--~-~lyv~GG~~~~~~ 396 (482)
.++++...++ .+++|......+.-.++.|+...+.|....... .....++++++- + | .-+++|.-.. ..
T Consensus 167 ~G~Sa~~~~d-~~v~GApG~~~w~G~v~~~~~~~~~~~~~~~~~~~~~~~sy~GySva~gD~ngDG~~DlvvGAP~~-~~ 244 (597)
T 3v4v_A 167 AGISSFYTKD-LIVMGAPGSSYWTGSLFVYNITTNKYKAFLDKQNQVKFGSYLGYSVGAGHFRSQHTTEVVGGAPQH-EQ 244 (597)
T ss_dssp BTSSEEECSS-EEEEEETTHHHHTBEEEEEETTTTBCCBBCCTTCCSCTTCCBTSSEEEECSSCTTSCEEEEEETTG-GG
T ss_pred CceeeEecCC-ceEEccccccccccceEEEEccCceeeecccccccccccCcCccEEEEEEECCCCCeEEEEecccc-cC
Confidence 4566665555 567887654444567899999999997651111 113344555543 1 3 3566665321 22
Q ss_pred cCeEEEEeCCCCceeecCCC----CCCccceEEEEE----CC--EEEEEcCC--CCCCCCCeEEEEeCCC-Cc--eeecC
Q psy11333 397 LNHVERYDPKENKWSRVAPM----TTRRLGVAVAVL----GG--FLYAIGGS--DGQSPLNTVERFDPKL-NR--WTAMA 461 (482)
Q Consensus 397 ~~~~~~yd~~~~~W~~~~~~----~~~r~~~~~~~~----~~--~i~v~GG~--~~~~~~~~~~~y~~~~-~~--W~~~~ 461 (482)
.-.++.|......|.....+ ...+++.++++. +| -| ++|.- .+......+++|--.. .. |....
T Consensus 245 ~G~V~v~~~~~~~~~~~~~l~G~~~g~~fG~sva~~D~ngDG~~Dl-vVGap~~~~~~~~G~v~vy~~~g~g~~~~~~~~ 323 (597)
T 3v4v_A 245 IGKAYIFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNADGFSDL-LVGAPMQSTIREEGRVFVYINSGSGAVMNAMET 323 (597)
T ss_dssp TCEEEEEEECSSSEEEEEEEECSSTTCCTTSEEEEECTTCSSSCEE-EEEETTCCSSSCCCEEEEEEECSSSSCEECCSS
T ss_pred CceEEEEecCCCceeEEEEecccccCCCCcceEEEEeeCCCCCceE-EEEcccccCCCcCCeEEEEEECCCCcceeccce
Confidence 34678887666788765432 233556666655 22 35 55532 1112345677774332 22 54322
Q ss_pred CC-----CcCCCceeEEEEcCCCCC
Q psy11333 462 PM-----STRRKHLGCAVFVGDNGA 481 (482)
Q Consensus 462 ~~-----~~~r~~~~~~~~~~~~~~ 481 (482)
.+ ...+++.+++.+++-+||
T Consensus 324 ~l~g~~~~~~~FG~sva~~gDlngD 348 (597)
T 3v4v_A 324 NLVGSDKYAARFGESIVNLGDIDND 348 (597)
T ss_dssp CBCTTCCTTCCTTSCEECCCCSSCS
T ss_pred EEeCCcccccccccccccccccCCC
Confidence 22 235677777777776665
No 324
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=59.69 E-value=69 Score=34.33 Aligned_cols=104 Identities=13% Similarity=-0.004 Sum_probs=58.7
Q ss_pred ceeE-EEeCCCCCeeeccCCCCCCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEE
Q psy11333 303 SSVE-RYDPQSSDWKIVAPMSKRRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAV 380 (482)
Q Consensus 303 ~~~~-~~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~ 380 (482)
..++ .+|..+.....+. .........+.. +++..++++.+ .+++.||..+++-..+ ..............
T Consensus 358 ~~l~~~~d~~~~~~~~l~--~~~~~~~~~~~SpDG~~la~~~~~-----~~v~~~d~~tg~~~~~-~~~~~~~v~~~~~S 429 (1045)
T 1k32_A 358 GDFLGIYDYRTGKAEKFE--ENLGNVFAMGVDRNGKFAVVANDR-----FEIMTVDLETGKPTVI-ERSREAMITDFTIS 429 (1045)
T ss_dssp EEEEEEEETTTCCEEECC--CCCCSEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEE-EECSSSCCCCEEEC
T ss_pred CceEEEEECCCCCceEec--CCccceeeeEECCCCCEEEEECCC-----CeEEEEECCCCceEEe-ccCCCCCccceEEC
Confidence 4688 8898887765554 111222233332 66666666543 4799999999887666 21111111122233
Q ss_pred ECCEEEEEeccCC-----CcccCeEEEEeCCCCceeecC
Q psy11333 381 LDGFLYAVGGQDG-----VQCLNHVERYDPKENKWSRVA 414 (482)
Q Consensus 381 ~~~~lyv~GG~~~-----~~~~~~~~~yd~~~~~W~~~~ 414 (482)
-+|+.+++++..+ ......++.||..+.+...+.
T Consensus 430 pDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 430 DNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT 468 (1045)
T ss_dssp TTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECS
T ss_pred CCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEee
Confidence 4677666665422 112357899999887755554
No 325
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=57.88 E-value=1.1e+02 Score=27.73 Aligned_cols=140 Identities=14% Similarity=0.125 Sum_probs=72.7
Q ss_pred CCCCCcEEEEeccccCCCCCceeEEEeCCCCC---eeeccCCCCCCCce-eEEEE-CC-EEEEEecCCCCCCCCeEEEEe
Q psy11333 283 PSRRGEVLFAVGGWCSGDAISSVERYDPQSSD---WKIVAPMSKRRCGV-GVAVL-ND-LLYAVGGHDGQSYLNSIERYD 356 (482)
Q Consensus 283 ~~~~~~~l~~~GG~~~~~~~~~~~~~d~~~~~---W~~~~~~~~~~~~~-~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd 356 (482)
++.-++.+||.+... ...+++++|..+. |-...+....+.+. +++.. ++ .|++..+ . ..++++|
T Consensus 143 avD~~GnaYVt~s~~----~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~-----g~L~~fD 212 (334)
T 2p9w_A 143 AQDRDGNSYVAFALG----MPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-P-----RALTAFD 212 (334)
T ss_dssp EECTTSCEEEEEEES----SCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-S-----SSEEEEE
T ss_pred EECCCCCEEEeCCCC----CCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-C-----CeEEEEc
Confidence 345578999986532 1569999998763 54323323334443 44444 45 5555554 2 3588999
Q ss_pred CCCCceeecC-C--CC-CCccccee--EEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecC---CCCC---CccceE
Q psy11333 357 PQTNQWSCDV-A--PT-TSCRTSVG--VAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVA---PMTT---RRLGVA 424 (482)
Q Consensus 357 ~~~~~W~~~~-~--~~-~~~r~~~~--~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~~~---~r~~~~ 424 (482)
..+.....++ . .. ......-+ ..-.+|++.++... .+.++.+-.. +.|.... ..|. ++...+
T Consensus 213 ~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~-----~~~~~~l~S~-DgW~sa~~~g~~~~~~~~~g~tt 286 (334)
T 2p9w_A 213 VSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGAR-----APYAISFRSW-DNWKSANIKKTKRSELQNSGFTA 286 (334)
T ss_dssp CSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEE-----TTEEEEEECS-STTSEEEEEEEECGGGGSSCEEE
T ss_pred CCCCcceeecccccCCcccccCcccccccccCCEEEEEEcC-----CCCEEEEECC-CCcceeEEeeeecCccccCceeE
Confidence 8743321120 0 00 01111112 22368888555432 1234444443 3397754 2222 344444
Q ss_pred EEE----ECCEEEEEcCC
Q psy11333 425 VAV----LGGFLYAIGGS 438 (482)
Q Consensus 425 ~~~----~~~~i~v~GG~ 438 (482)
.++ .+++||++.++
T Consensus 287 ~t~~~~~~~~~iYvv~~~ 304 (334)
T 2p9w_A 287 VADYYQGSEQGLYAVSAF 304 (334)
T ss_dssp EEEEEETTEEEEEEEECC
T ss_pred EEEeccccCCeEEEEeee
Confidence 444 57899999875
No 326
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=57.60 E-value=1.2e+02 Score=28.21 Aligned_cols=65 Identities=18% Similarity=0.282 Sum_probs=45.4
Q ss_pred ceeEEEECCEEEEEe-cCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEECCEEEEEecc
Q psy11333 327 GVGVAVLNDLLYAVG-GHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQ 391 (482)
Q Consensus 327 ~~~~~~~~~~iyv~G-G~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~ 391 (482)
-.++-.++|.||+.- |..+...-+.+.+-+.....|+.+--|-.........+..++.||++|..
T Consensus 341 EPCvkyYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsE 406 (670)
T 3ju4_A 341 EPCIKYYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSE 406 (670)
T ss_dssp EEEEEEETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEEC
T ss_pred cchhhhhCCEEEEEecCcCCCCCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEecc
Confidence 345666899999985 44443445678888889999998711223334455678889999999973
No 327
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=57.51 E-value=1.5e+02 Score=29.21 Aligned_cols=110 Identities=12% Similarity=0.097 Sum_probs=59.3
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCC-CCceeEEEECCEEEEEecCCCCCCCCeEEEEeCCCCceeec
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKR-RCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCD 365 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~-~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 365 (482)
++..++.|+.+ ..+..+|..+.+....-+.... ......+..++...+.++.++ .+..||+.+.+-...
T Consensus 250 dg~~l~s~s~D-----~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~-----~i~~~~~~~~~~~~~ 319 (611)
T 1nr0_A 250 DGTKIASASAD-----KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANG-----FINFVNPELGSIDQV 319 (611)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTC-----CEEEEETTTTEEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCC-----cEEEEeCCCCCcceE
Confidence 45555666532 4688889888766432221111 111223334666667776553 578899887653322
Q ss_pred CCCCCCcccceeEEE-ECCEEEEEeccCCCcccCeEEEEeCCCCceeec
Q psy11333 366 VAPTTSCRTSVGVAV-LDGFLYAVGGQDGVQCLNHVERYDPKENKWSRV 413 (482)
Q Consensus 366 ~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 413 (482)
... ....-.+++. -+++..+.|+.++ .+..||..+......
T Consensus 320 ~~g--h~~~v~~l~~spdg~~l~s~s~D~-----~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 320 RYG--HNKAITALSSSADGKTLFSADAEG-----HINSWDISTGISNRV 361 (611)
T ss_dssp ECC--CSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEEC
T ss_pred EcC--CCCCEEEEEEeCCCCEEEEEeCCC-----cEEEEECCCCceeee
Confidence 011 1111112222 2677788887653 577899887765443
No 328
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=57.01 E-value=1.1e+02 Score=27.68 Aligned_cols=82 Identities=17% Similarity=0.255 Sum_probs=47.4
Q ss_pred CCEEEEEeccCC-----CcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CC-EEEEEcCCCCCCCCCeEEEEeCCC
Q psy11333 382 DGFLYAVGGQDG-----VQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GG-FLYAIGGSDGQSPLNTVERFDPKL 454 (482)
Q Consensus 382 ~~~lyv~GG~~~-----~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~y~~~~ 454 (482)
++++|+....++ ......++.||+.+.+ .+..++.+. ..+++.. +| .||+.++ +++.+||+.+
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~i~~~~-p~~ia~spdg~~l~v~n~-------~~v~v~D~~t 334 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVARIPGRD-ALSMTIDQQRNLMLTLDG-------GNVNVYDISQ 334 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEEEECTT-CCEEEEETTTTEEEEECS-------SCEEEEECSS
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCc--EEEEEecCC-eeEEEECCCCCEEEEeCC-------CeEEEEECCC
Confidence 488999864211 1124689999988765 444444444 5555554 44 6776553 5799999886
Q ss_pred CceeecCCC-CcCCCceeEE
Q psy11333 455 NRWTAMAPM-STRRKHLGCA 473 (482)
Q Consensus 455 ~~W~~~~~~-~~~r~~~~~~ 473 (482)
.+-+.++.+ +.++.-.+++
T Consensus 335 ~~l~~~~~i~~~G~~P~~~~ 354 (361)
T 2oiz_A 335 PEPKLLRTIEGAAEASLQVQ 354 (361)
T ss_dssp SSCEEEEEETTSCSSEEEEE
T ss_pred CcceeeEEeccCCCCcEEEE
Confidence 522555553 3333333433
No 329
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=55.51 E-value=1.3e+02 Score=27.99 Aligned_cols=129 Identities=16% Similarity=0.204 Sum_probs=74.8
Q ss_pred CCCCCee--eccCCCCCCCceeEEEECCEEEEEecCCCCCCCCeE-EEEeCC------CCceeecCCCCCCcccceeEEE
Q psy11333 310 PQSSDWK--IVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSI-ERYDPQ------TNQWSCDVAPTTSCRTSVGVAV 380 (482)
Q Consensus 310 ~~~~~W~--~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~-~~yd~~------~~~W~~~~~~~~~~r~~~~~~~ 380 (482)
...+.|+ .++..|....-|+-+++++.=|++|=.++.-....+ ..|-+. .-.=+.++......-.-+++-.
T Consensus 267 F~~spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvky 346 (670)
T 3ju4_A 267 FHKSPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKY 346 (670)
T ss_dssp STTSCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEE
T ss_pred eccCCceecccccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhhhccccccchhhh
Confidence 3445674 345566555568888998888888865543333332 233222 1111233122112223456667
Q ss_pred ECCEEEEEe-ccCCCcccCeEEEEeCCCCceeecCCC-CCCccceEEEEECCEEEEEcCC
Q psy11333 381 LDGFLYAVG-GQDGVQCLNHVERYDPKENKWSRVAPM-TTRRLGVAVAVLGGFLYAIGGS 438 (482)
Q Consensus 381 ~~~~lyv~G-G~~~~~~~~~~~~yd~~~~~W~~~~~~-~~~r~~~~~~~~~~~i~v~GG~ 438 (482)
++|.||++- |..+...-+.+.+-+.....|+.+.-. ..--.....+..++.||++|-.
T Consensus 347 YdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsE 406 (670)
T 3ju4_A 347 YDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSE 406 (670)
T ss_dssp ETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEEC
T ss_pred hCCEEEEEecCcCCCCCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEecc
Confidence 899999985 444433345677777778899987622 1222233456789999999874
No 330
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=54.68 E-value=1.9e+02 Score=29.54 Aligned_cols=164 Identities=15% Similarity=0.057 Sum_probs=78.2
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCC-CeeeccCCCCCCCceeEEE-ECC-EEEEEecCCCCCCCCeEEEEeCCCCcee
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSS-DWKIVAPMSKRRCGVGVAV-LND-LLYAVGGHDGQSYLNSIERYDPQTNQWS 363 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~-~W~~~~~~~~~~~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 363 (482)
+++.++++-...+.....++.+|..++ +. ++. ..+....+.+- -++ .|+... .+.......++.++..+.+-+
T Consensus 185 DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l~~-~~~~~~~~~~WspDg~~l~y~~-~d~~~~~~~v~~~~lgt~~~~ 260 (751)
T 2xe4_A 185 EHDLVAFSVDMSGNEVYTIEFKRISDPSQT--IAD-KVSGTNGEIVWGPDHTSLFYVT-KDETLRENKVWRHVMGKLQSE 260 (751)
T ss_dssp TTCEEEEEEESSSSSCEEEEEEETTCTTCC--CCC-CEEEECSCCEECSSTTEEEEEE-ECTTCCEEEEEEEETTSCGGG
T ss_pred CCCEEEEEEeCCCCceEEEEEEECCCCCEe--CCc-cccCceeeEEEecCCCEEEEEE-ECCCCCCCEEEEEECCCCchh
Confidence 455444443222222346899999887 52 111 01111111222 244 454442 322223347888888776422
Q ss_pred --ecCCCCCCcccceeE-EEECCEEEEEeccCCCcccCeEEEEeCCCC--ce--eecCCCCCCccceEEE-EECCEEEEE
Q psy11333 364 --CDVAPTTSCRTSVGV-AVLDGFLYAVGGQDGVQCLNHVERYDPKEN--KW--SRVAPMTTRRLGVAVA-VLGGFLYAI 435 (482)
Q Consensus 364 --~~~~~~~~~r~~~~~-~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~--~W--~~~~~~~~~r~~~~~~-~~~~~i~v~ 435 (482)
.+ -..+......+. .+-+|+..++..... ....++.+|+.+. .+ ..+.+-... ..+... ..++.||+.
T Consensus 261 ~~lv-~~~~~~~~~~~~~~SpDg~~l~~~~~~~--~~~~l~~~d~~~~~~~~~~~~l~~~~~~-~~~s~~~~~g~~l~~~ 336 (751)
T 2xe4_A 261 DVCL-YEEHNPLFSAFMYKAADTNTLCIGSQSP--ETAEVHLLDLRKGNAHNTLEIVRPREKG-VRYDVQMHGTSHLVIL 336 (751)
T ss_dssp CEEE-EECCCTTCEEEEEECTTSSEEEEEEECS--SCEEEEEEESSSCTTCCCEEESSCCCTT-CCEEEEEETTTEEEEE
T ss_pred cEEE-EecCCCceEEEEEECCCCCEEEEEecCC--CCceEEEEECCCCCCCceeEEeecCCCC-ceEEEeeeeCCEEEEE
Confidence 11 001112222222 223555333332222 2457889998765 46 555432111 112222 237788888
Q ss_pred cCCCCCCCCCeEEEEeCCC-Cceee
Q psy11333 436 GGSDGQSPLNTVERFDPKL-NRWTA 459 (482)
Q Consensus 436 GG~~~~~~~~~~~~y~~~~-~~W~~ 459 (482)
...++ .....++.+|..+ ..|+.
T Consensus 337 t~~~~-a~~~~L~~~d~~~~~~~~~ 360 (751)
T 2xe4_A 337 TNEGG-AVNHKLLIAPRGQPSDWSH 360 (751)
T ss_dssp ECTTT-CTTCEEEEEETTSTTCCCC
T ss_pred eCCCC-CCCcEEEEEcCCCccccee
Confidence 76541 1235799999876 67876
No 331
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=53.73 E-value=1.9e+02 Score=29.35 Aligned_cols=149 Identities=6% Similarity=-0.028 Sum_probs=78.9
Q ss_pred ceeEEEeCCC--CCeeeccCCCCCCCceeEEEECCEEEEEecCC--C---CCCCCeEEEEeCCC--------CceeecCC
Q psy11333 303 SSVERYDPQS--SDWKIVAPMSKRRCGVGVAVLNDLLYAVGGHD--G---QSYLNSIERYDPQT--------NQWSCDVA 367 (482)
Q Consensus 303 ~~~~~~d~~~--~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~--~---~~~~~~~~~yd~~~--------~~W~~~~~ 367 (482)
+.++..|... ..|..+ ..|+...-+...++++|+....+ . .....++...|..+ ..|+.+.+
T Consensus 269 ~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 345 (711)
T 4hvt_A 269 YDNYILDTKYKNLKLQKI---NMPSDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFT 345 (711)
T ss_dssp EEEEEEECSSSSCEEEEC---CSCTTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEEC
T ss_pred eeEEEEcCCCCCCcceEe---ecCCcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEEC
Confidence 4566666543 456555 33333222456799999976433 1 11345688888654 46987413
Q ss_pred CCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeec--CCCCCCccceEEEEE---CCEEEEE-cCCCCC
Q psy11333 368 PTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRV--APMTTRRLGVAVAVL---GGFLYAI-GGSDGQ 441 (482)
Q Consensus 368 ~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~--~~~~~~r~~~~~~~~---~~~i~v~-GG~~~~ 441 (482)
+-. .+.--.+...++.+++..-.++ ...+..+|+.+++|... .++|.. ........ ++.+++. .+..
T Consensus 346 ~~~-~~~l~~~~~~~~~l~~~~~~~~---~~~l~~~~~~~g~~~~~~~i~lp~~-~~~~~~~~~~~~~~~~~~~ss~~-- 418 (711)
T 4hvt_A 346 PTA-NEVFNFISTTKDRVFLATYDNV---VAKVVTFTLENEQWTKPVVLKLPYQ-NAIFGMSSYEEEEEALITIENSI-- 418 (711)
T ss_dssp CCT-TEEEEEEEECSSCEEEEEEETT---EEEEEEECEETTEECCCEEECCCST-TCEEEEECCTTCSCEEEEEECSS--
T ss_pred CCC-CCeEEEEEEECCEEEEEEEECC---EEEEEEEECCCCceEEEeccCCCCC-eEEEEEeecCcCCEEEEEEecCC--
Confidence 222 2233344556777777654333 24688899888888432 234432 11222221 2334433 3332
Q ss_pred CCCCeEEEEeCCCCceeecCCC
Q psy11333 442 SPLNTVERFDPKLNRWTAMAPM 463 (482)
Q Consensus 442 ~~~~~~~~y~~~~~~W~~~~~~ 463 (482)
.-..++.||.. .+++.+...
T Consensus 419 -~P~~~~~~d~~-~~~~~l~~~ 438 (711)
T 4hvt_A 419 -VPPTIYLWVKT-HELKIIRKA 438 (711)
T ss_dssp -SCCEEEEECTT-SCEEEEECC
T ss_pred -CCCEEEEEeCC-CcEEEEecC
Confidence 23578888877 666666433
No 332
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=53.22 E-value=1.4e+02 Score=27.54 Aligned_cols=107 Identities=14% Similarity=0.073 Sum_probs=56.6
Q ss_pred EEEEEecCCCCCCCCeEEEEeCCCCce-----eecCCCCCCc--c-------cceeEEEE--CCEEEEEeccCCCcccCe
Q psy11333 336 LLYAVGGHDGQSYLNSIERYDPQTNQW-----SCDVAPTTSC--R-------TSVGVAVL--DGFLYAVGGQDGVQCLNH 399 (482)
Q Consensus 336 ~iyv~GG~~~~~~~~~~~~yd~~~~~W-----~~~~~~~~~~--r-------~~~~~~~~--~~~lyv~GG~~~~~~~~~ 399 (482)
.+++.|+.++ .+..||..+.+- ..+ .....+ + .....+.+ ++++++.|+. ..
T Consensus 240 ~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~------~~ 307 (447)
T 3dw8_B 240 NTFVYSSSKG-----TIRLCDMRASALCDRHSKLF-EEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY------LS 307 (447)
T ss_dssp TEEEEEETTS-----CEEEEETTTCSSSCTTCEEE-CCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES------SE
T ss_pred cEEEEEeCCC-----eEEEEECcCCccccceeeEe-ccCCCccccccccccCceEEEEEECCCCCEEEEeeC------Ce
Confidence 6888888653 689999988764 222 111100 0 01122222 5777777754 46
Q ss_pred EEEEeCCC-Ccee-ecCCCCCCcc-------------ceEEEE-ECCEEEEEcCCCCCCCCCeEEEEeCCCCceee
Q psy11333 400 VERYDPKE-NKWS-RVAPMTTRRL-------------GVAVAV-LGGFLYAIGGSDGQSPLNTVERFDPKLNRWTA 459 (482)
Q Consensus 400 ~~~yd~~~-~~W~-~~~~~~~~r~-------------~~~~~~-~~~~i~v~GG~~~~~~~~~~~~y~~~~~~W~~ 459 (482)
+..||..+ .+-. .+......+. ...++. -++..++.|+.+ +.+.+||..+.+-..
T Consensus 308 v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~d-----g~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 308 VKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYN-----NFFRMFDRNTKRDIT 378 (447)
T ss_dssp EEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECST-----TEEEEEETTTCCEEE
T ss_pred EEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccC-----CEEEEEEcCCCccee
Confidence 88898875 3211 1111110000 011232 366667888766 478999988776544
No 333
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=51.51 E-value=58 Score=30.77 Aligned_cols=105 Identities=12% Similarity=0.050 Sum_probs=59.2
Q ss_pred CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEE-ECC-EEEEEeccCCCcccCeEEEEeCCCCcee
Q psy11333 334 NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAV-LDG-FLYAVGGQDGVQCLNHVERYDPKENKWS 411 (482)
Q Consensus 334 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~-~~~-~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 411 (482)
++.||+.--. ..+.++|+.+++.+.+ .+ ......++++ .++ .||+....++. ....+..++.. ..|.
T Consensus 149 ~g~Lyv~d~~------~~I~~id~~~~~v~~~-~~--~~~~P~~ia~d~~G~~lyvad~~~~~-~~~~v~~~~~~-g~~~ 217 (430)
T 3tc9_A 149 HNHLYLVGEQ------HPTRLIDFEKEYVSTV-YS--GLSKVRTICWTHEADSMIITNDQNNN-DRPNNYILTRE-SGFK 217 (430)
T ss_dssp EEEEEEEEBT------EEEEEEETTTTEEEEE-EC--CCSCEEEEEECTTSSEEEEEECCSCT-TSEEEEEEEGG-GTSC
T ss_pred CCeEEEEeCC------CcEEEEECCCCEEEEE-ec--CCCCcceEEEeCCCCEEEEEeCCCCc-ccceEEEEeCC-Ccee
Confidence 4789988532 5799999999988876 32 1111223333 234 49998754321 12345566653 3343
Q ss_pred ---ecCCCCCCccceEEEEE--CCEEEEEcCCCCCCCCCeEEEEeCCCCce
Q psy11333 412 ---RVAPMTTRRLGVAVAVL--GGFLYAIGGSDGQSPLNTVERFDPKLNRW 457 (482)
Q Consensus 412 ---~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~y~~~~~~W 457 (482)
.++.+..| +++++. ++.||+.--.+ ..+++|++.+..-
T Consensus 218 ~~~~l~~~~~p---~giavdp~~g~lyv~d~~~-----~~V~~~~~~~~~~ 260 (430)
T 3tc9_A 218 VITELTKGQNC---NGAETHPINGELYFNSWNA-----GQVFRYDFTTQET 260 (430)
T ss_dssp SEEEEEECSSC---CCEEECTTTCCEEEEETTT-----TEEEEEETTTTEE
T ss_pred eeeeeccCCCc---eEEEEeCCCCEEEEEECCC-----CEEEEEECCCCcE
Confidence 33322222 333333 67888875322 4799999886654
No 334
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=51.47 E-value=45 Score=24.07 Aligned_cols=42 Identities=14% Similarity=0.151 Sum_probs=32.8
Q ss_pred HHHHHHHhc---cCCCCCHHHHHHHHhhCCCHHHHHHHHHHHHHh
Q psy11333 125 DICCEFLKR---QLDPSNCLGIRAFADTHSCRDLLRIADKFTQHN 166 (482)
Q Consensus 125 ~~~~~~i~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~~i~~~ 166 (482)
....+|+-. .++.+++..++..|..+..+.|.+.|.+++..+
T Consensus 64 ~~~l~~iYt~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 64 LILLKYMYSDEIDLEADTVLATLYAAKKYIVPALAKACVNFLETS 108 (109)
T ss_dssp HHHHHHHHHCCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCccCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 334445443 245578999999999999999999999998765
No 335
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=50.52 E-value=1.9e+02 Score=30.44 Aligned_cols=136 Identities=14% Similarity=0.017 Sum_probs=68.9
Q ss_pred ceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCceeecC-C------CCCCcc
Q psy11333 303 SSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDV-A------PTTSCR 373 (482)
Q Consensus 303 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~------~~~~~r 373 (482)
..+..+|..+.+.... +..+ ....++.+ ++...+.|+.++ .+..||..+.+-.... + ..+..+
T Consensus 79 ~~v~lWd~~~~~~~~~--~~~~-~~V~~v~~sp~g~~l~sgs~dg-----~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h 150 (902)
T 2oaj_A 79 DTVYVLSLYSQKVLTT--VFVP-GKITSIDTDASLDWMLIGLQNG-----SMIVYDIDRDQLSSFKLDNLQKSSFFPAAR 150 (902)
T ss_dssp CEEEEEETTTCSEEEE--EECS-SCEEEEECCTTCSEEEEEETTS-----CEEEEETTTTEEEEEEECCHHHHHTCSSSC
T ss_pred CeEEEEECCCCcEEEE--EcCC-CCEEEEEECCCCCEEEEEcCCC-----cEEEEECCCCccccceeccccccccccccC
Confidence 4677888877654211 1111 11222222 566667776553 6889999877632110 0 011111
Q ss_pred c--ceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCC---------------CCc-cceEEEEE--CCE
Q psy11333 374 T--SVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMT---------------TRR-LGVAVAVL--GGF 431 (482)
Q Consensus 374 ~--~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~---------------~~r-~~~~~~~~--~~~ 431 (482)
. -.+++.. ++.++++|+.+ ..+ .||..+.+-...-... ..+ .....+.+ ++.
T Consensus 151 ~~~V~sl~~sp~~~~~l~~g~~d-----g~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~ 224 (902)
T 2oaj_A 151 LSPIVSIQWNPRDIGTVLISYEY-----VTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL 224 (902)
T ss_dssp CCCCCEEEEETTEEEEEEEECSS-----CEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS
T ss_pred CCCeEEEEEccCCCCEEEEEeCC-----CcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCC
Confidence 1 1123333 23566676643 347 8998877543221111 000 11122222 778
Q ss_pred EEEEcCCCCCCCCCeEEEEeCCCCce
Q psy11333 432 LYAIGGSDGQSPLNTVERFDPKLNRW 457 (482)
Q Consensus 432 i~v~GG~~~~~~~~~~~~y~~~~~~W 457 (482)
.++.|+.++ .+..||..+.+-
T Consensus 225 ~lasgs~Dg-----~i~lWd~~~g~~ 245 (902)
T 2oaj_A 225 HIITIHEDN-----SLVFWDANSGHM 245 (902)
T ss_dssp EEEEEETTC-----CEEEEETTTCCE
T ss_pred EEEEEECCC-----eEEEEECCCCcE
Confidence 888888764 688999877654
No 336
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=50.30 E-value=94 Score=30.13 Aligned_cols=92 Identities=18% Similarity=0.154 Sum_probs=47.3
Q ss_pred CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEE-EECCEEEEEeccCCCcccCeEEEEeCCCCceee
Q psy11333 334 NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVA-VLDGFLYAVGGQDGVQCLNHVERYDPKENKWSR 412 (482)
Q Consensus 334 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 412 (482)
++++.+.|+.+ ..+..||.....-..+ .....+ -.+++ .-++++++.||.++ .+..||.....-..
T Consensus 478 d~~~las~~~d-----~~i~iw~~~~~~~~~~-~~h~~~--v~~l~~s~dg~~l~s~~~dg-----~v~lwd~~~~~~~~ 544 (577)
T 2ymu_A 478 DGQTIASASDD-----KTVKLWNRNGQLLQTL-TGHSSS--VRGVAFSPDGQTIASASDDK-----TVKLWNRNGQLLQT 544 (577)
T ss_dssp TSCEEEEEETT-----SEEEEEETTSCEEEEE-ECCSSC--EEEEEECTTSSCEEEEETTS-----EEEEECTTSCEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEcCCCCEEEEE-eCCCCC--EEEEEEcCCCCEEEEEECcC-----EEEEEeCCCCEEEE
Confidence 77777877755 3688899654433333 111111 11222 23677778887543 57778864433333
Q ss_pred cCCCCCCccceEEEEE-CCEEEEEcCCCC
Q psy11333 413 VAPMTTRRLGVAVAVL-GGFLYAIGGSDG 440 (482)
Q Consensus 413 ~~~~~~~r~~~~~~~~-~~~i~v~GG~~~ 440 (482)
+... .....+++.. +++.++.||.++
T Consensus 545 ~~~h--~~~v~~~~fs~dg~~l~s~~~D~ 571 (577)
T 2ymu_A 545 LTGH--SSSVWGVAFSPDGQTIASASSDK 571 (577)
T ss_dssp EECC--SSCEEEEEECTTSSCEEEEETTS
T ss_pred EcCC--CCCEEEEEEcCCCCEEEEEeCCC
Confidence 3221 1111222222 677777777653
No 337
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=48.81 E-value=9.2 Score=37.41 Aligned_cols=85 Identities=11% Similarity=0.098 Sum_probs=56.5
Q ss_pred eEEEEeCCeEEeceeEEeeccCH-HHHHHhcC-CCCcCccceEEEccCCHHHHHHHHHHhhc-CeeeeccccHh-hHHHH
Q psy11333 39 DVVLNVGARKIFAHRVVLSACSP-YFRAMFTG-ELAESRQAEVTIRDIDDVAMDNLIEFCYT-SHITVEESNVQ-TLLPA 114 (482)
Q Consensus 39 Dv~i~~~~~~~~~hk~iL~~~S~-~F~~~~~~-~~~e~~~~~i~l~~~~~~~~~~~l~~~y~-~~~~~~~~~~~-~ll~~ 114 (482)
-|.|-|+|..|...+..|..... .+..+... .......++.-+ |=++..|..+|.|..+ |.+.++.+-|. .+.+=
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~-DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~~E 131 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF-DRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEE 131 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE-CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHHHHH
T ss_pred EEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE-cCChHHHHHHHHHHhcCCccccCCcccHHHHHHH
Confidence 36788999999998888754321 11111111 111122334444 6799999999999999 88776655444 46788
Q ss_pred hcccChhhHH
Q psy11333 115 ACLLQLVEIQ 124 (482)
Q Consensus 115 a~~~~~~~L~ 124 (482)
|++|+++++.
T Consensus 132 ~~f~~i~~~~ 141 (514)
T 2r9r_B 132 IRFYELGEEA 141 (514)
T ss_dssp HHHTTCCHHH
T ss_pred HHhcCCCHHH
Confidence 9999998765
No 338
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=47.83 E-value=65 Score=30.47 Aligned_cols=115 Identities=10% Similarity=-0.098 Sum_probs=63.1
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCEEEEEecCCC----CCCCCeEEEEeCCCC
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDLLYAVGGHDG----QSYLNSIERYDPQTN 360 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~----~~~~~~~~~yd~~~~ 360 (482)
.+.+|+.-....... +.+..+|+.+++-. ..++.+... +++.. +..+|+..-... ....+.+.++|+.+.
T Consensus 84 ~~~vyV~n~~~~~~~-~~VsVID~~t~~vv--~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 84 ARRVYIQDPAHFAAI-TQQFVIDGSTGRIL--GMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp TTEEEEEECTTTCSS-EEEEEEETTTTEEE--EEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCEEEEECCCcCCCC-CeEEEEECCCCEEE--EEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 578999865321111 78999999887643 333333433 44443 446888742100 011357999999998
Q ss_pred ceeecCCCCC-Ccc-----cceeEEE--ECCEEEEEeccCCCcccCeEEEEeCCCCce
Q psy11333 361 QWSCDVAPTT-SCR-----TSVGVAV--LDGFLYAVGGQDGVQCLNHVERYDPKENKW 410 (482)
Q Consensus 361 ~W~~~~~~~~-~~r-----~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W 410 (482)
+-..- -+++ .+| .-+.+++ -+.++|+..-. ..+.+.++|+.+.+=
T Consensus 160 ~vv~~-I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~----~~~~VsVID~~t~kv 212 (426)
T 3c75_H 160 LPIAD-IELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS----PAPAVGVVDLEGKTF 212 (426)
T ss_dssp CEEEE-EEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----SSCEEEEEETTTTEE
T ss_pred cEEEE-EECCCccccccCCCcceEEEcCCCCEEEEEecC----CCCeEEEEECCCCeE
Confidence 75422 1111 111 1223333 34578877421 135788999887653
No 339
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=47.76 E-value=1.8e+02 Score=27.29 Aligned_cols=143 Identities=17% Similarity=0.180 Sum_probs=75.4
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEE-ECCEEEEEecCCCCCCCCeEEEEeCCCCcee--
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAV-LNDLLYAVGGHDGQSYLNSIERYDPQTNQWS-- 363 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-- 363 (482)
++.||+.-.. ..+.++|+.+++...+.. ......++++ -++.||+....+. .....+..++... .|.
T Consensus 152 ~g~Lyv~D~~------~~I~~id~~~g~v~~~~~--~~~~P~giavd~dG~lyVad~~~~-~~~~gv~~~~~~~-~~~~~ 221 (433)
T 4hw6_A 152 YDDLYWVGQR------DAFRHVDFVNQYVDIKTT--NIGQCADVNFTLNGDMVVVDDQSS-DTNTGIYLFTRAS-GFTER 221 (433)
T ss_dssp TCEEEEECBT------SCEEEEETTTTEEEEECC--CCSCEEEEEECTTCCEEEEECCSC-TTSEEEEEECGGG-TTCCE
T ss_pred CCEEEEEeCC------CCEEEEECCCCEEEEeec--CCCCccEEEECCCCCEEEEcCCCC-cccceEEEEECCC-Ceecc
Confidence 3789988541 689999998888766543 1122234444 3566998863221 1123355565532 232
Q ss_pred -ecCCCCCCcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCce-eecCCCCCCccceEEEEE-CC-EEEEEcC
Q psy11333 364 -CDVAPTTSCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKW-SRVAPMTTRRLGVAVAVL-GG-FLYAIGG 437 (482)
Q Consensus 364 -~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~~~~r~~~~~~~~-~~-~i~v~GG 437 (482)
.+ +.+ ....++++. ++.||+.-.. ...+++||+.+.+- ..+...........++.. ++ .||+.--
T Consensus 222 ~~~-~~~---~~P~giavd~~~G~lyv~d~~-----~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~ 292 (433)
T 4hw6_A 222 LSL-CNA---RGAKTCAVHPQNGKIYYTRYH-----HAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN 292 (433)
T ss_dssp EEE-EEC---SSBCCCEECTTTCCEEECBTT-----CSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEET
T ss_pred ccc-ccc---CCCCEEEEeCCCCeEEEEECC-----CCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC
Confidence 22 211 112233433 6889987532 24799999986654 222211111112234433 44 5998853
Q ss_pred CCCCCCCCeEEEEeCC
Q psy11333 438 SDGQSPLNTVERFDPK 453 (482)
Q Consensus 438 ~~~~~~~~~~~~y~~~ 453 (482)
. .+.|++++..
T Consensus 293 ~-----~~~I~~~~~d 303 (433)
T 4hw6_A 293 G-----KHCIYRVDYN 303 (433)
T ss_dssp T-----TTEEEEEEBC
T ss_pred C-----CCEEEEEeCC
Confidence 3 2578886654
No 340
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=47.59 E-value=1.7e+02 Score=26.91 Aligned_cols=27 Identities=7% Similarity=0.075 Sum_probs=18.5
Q ss_pred ECCEEEEEeccCCCcccCeEEEEeCCCCceee
Q psy11333 381 LDGFLYAVGGQDGVQCLNHVERYDPKENKWSR 412 (482)
Q Consensus 381 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 412 (482)
-+++.++.|+.++ .+..||..+.+-..
T Consensus 352 ~~~~~l~s~s~dg-----~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 352 GSDSVVMTGSYNN-----FFRMFDRNTKRDIT 378 (447)
T ss_dssp TTSSEEEEECSTT-----EEEEEETTTCCEEE
T ss_pred CCCCEEEEeccCC-----EEEEEEcCCCccee
Confidence 3566677777643 57888888776544
No 341
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=43.26 E-value=2e+02 Score=26.42 Aligned_cols=143 Identities=13% Similarity=0.090 Sum_probs=80.3
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCCeeecc--CCCCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCc
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVA--PMSKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQ 361 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~--~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 361 (482)
.++.||+.... ...++++++....-..+. .+..| .++++- ++.||+.--.. ...++++++....
T Consensus 169 ~~g~lY~~d~~-----~~~I~~~~~dg~~~~~l~~~~l~~P---~giavdp~~g~ly~td~~~----~~~I~r~~~dG~~ 236 (386)
T 3v65_B 169 VHDKLYWTDSG-----TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN----TPRIEASSMDGSG 236 (386)
T ss_dssp TTTEEEEEETT-----TTEEEECBTTSCSCEEEECSSCSCE---EEEEEETTTTEEEEEECSS----SCEEEEEETTSCS
T ss_pred CCCeEEEEcCC-----CCeEEEEeCCCCceEEeecCCCCCC---cEEEEEcCCCeEEEeccCC----CCEEEEEeCCCCC
Confidence 36778877531 246788887765433322 22233 244443 78899875211 3579999988654
Q ss_pred eeec-CCCCCCcccceeEEE--ECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEECCEEEEEcCC
Q psy11333 362 WSCD-VAPTTSCRTSVGVAV--LDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVLGGFLYAIGGS 438 (482)
Q Consensus 362 W~~~-~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~ 438 (482)
-+.+ ...+. ...++++ .+++||+.-.. .+.++++|+....-..+.... ...-.++++.++.||+.--.
T Consensus 237 ~~~~~~~~~~---~PnGlavd~~~~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~~~-~~~P~giav~~~~ly~td~~ 307 (386)
T 3v65_B 237 RRIIADTHLF---WPNGLTIDYAGRRMYWVDAK-----HHVIERANLDGSHRKAVISQG-LPHPFAITVFEDSLYWTDWH 307 (386)
T ss_dssp CEEEECSSCS---CEEEEEEEGGGTEEEEEETT-----TTEEEEECTTSCSCEEEECSS-CSSEEEEEEETTEEEEEETT
T ss_pred cEEEEECCCC---CeeeEEEeCCCCEEEEEECC-----CCEEEEEeCCCCeeEEEEECC-CCCceEEEEECCEEEEeeCC
Confidence 4433 11121 1234554 37899998542 357899988643322222111 11224566678899998532
Q ss_pred CCCCCCCeEEEEeCCC
Q psy11333 439 DGQSPLNTVERFDPKL 454 (482)
Q Consensus 439 ~~~~~~~~~~~y~~~~ 454 (482)
+ +.|.++|..+
T Consensus 308 ~-----~~V~~~~~~~ 318 (386)
T 3v65_B 308 T-----KSINSANKFT 318 (386)
T ss_dssp T-----TEEEEEETTT
T ss_pred C-----CeEEEEECCC
Confidence 2 5688888433
No 342
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=43.22 E-value=1.3e+02 Score=29.90 Aligned_cols=155 Identities=17% Similarity=0.171 Sum_probs=89.9
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE----CCEEEEEecCC------C------CCCCC
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL----NDLLYAVGGHD------G------QSYLN 350 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~----~~~iyv~GG~~------~------~~~~~ 350 (482)
+..+|+-.. ....+.+.|+.+.+-..+-.+|....-|+.+.. ++.+|+-+... + +...+
T Consensus 101 G~~lfVnd~-----~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 101 GRFLFMNDK-----ANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp EEEEEEEET-----TTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred CCEEEEEcC-----CCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCc
Confidence 457777432 346799999999886655567766667777752 56787775321 1 12345
Q ss_pred eEEEEeCCCCc--eeecCCCCCCcccceeEEE-ECCEEEEEeccC--------------------------------CCc
Q psy11333 351 SIERYDPQTNQ--WSCDVAPTTSCRTSVGVAV-LDGFLYAVGGQD--------------------------------GVQ 395 (482)
Q Consensus 351 ~~~~yd~~~~~--W~~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~--------------------------------~~~ 395 (482)
.+-+.|..+++ |+-..+.-|. ...+. -++.+|+..-.+ ...
T Consensus 176 ~vtvID~~t~~v~~qI~Vgg~pd----~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~ 251 (595)
T 1fwx_A 176 VFTAVDADKWEVAWQVLVSGNLD----NCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ 251 (595)
T ss_dssp EEEEEETTTTEEEEEEEESSCCC----CEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSE
T ss_pred eEEEEECCCCeEEEEEEeCCCcc----ceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCee
Confidence 78899999876 5532122111 11111 123333333111 111
Q ss_pred ccCeEEEEeCCCCceee-cCCCCCCccceEEEEE-CC-EEEEEcCCCCCCCCCeEEEEeCCCC
Q psy11333 396 CLNHVERYDPKENKWSR-VAPMTTRRLGVAVAVL-GG-FLYAIGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 396 ~~~~~~~yd~~~~~W~~-~~~~~~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~y~~~~~ 455 (482)
..+.+-+.|..+.+... +...|.+..-|++.+. +| .+|+.+..+ +.+.+||..+.
T Consensus 252 ~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s-----~~VsVid~~~~ 309 (595)
T 1fwx_A 252 ELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLS-----PTVTVLDVTRF 309 (595)
T ss_dssp EETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTS-----SBEEEEEGGGH
T ss_pred EECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCC-----CeEEEEECccc
Confidence 23568888988744444 3456666677777776 45 577766543 57899998744
No 343
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=41.59 E-value=3.1e+02 Score=28.11 Aligned_cols=150 Identities=9% Similarity=0.080 Sum_probs=78.3
Q ss_pred cEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEE--EC-CEEEEEecCCCCCCCCeEEEEeCCCCceee
Q psy11333 288 EVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAV--LN-DLLYAVGGHDGQSYLNSIERYDPQTNQWSC 364 (482)
Q Consensus 288 ~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~--~~-~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 364 (482)
+.+|+.++..+ ..+++=.-..++|+.+..+|.. ....+. .+ +.+|+. . + ..+++=.-.-.+|+.
T Consensus 557 ~~~~~~~~~~~----~~v~~S~D~G~tW~~~~~l~~~--~~~i~~d~~~~~~~y~g-~-~-----g~v~~S~DgG~tW~~ 623 (763)
T 3a0f_A 557 TFVWSPSKADG----KGPYTSSDYGKTWTAPSGLSKQ--TTGIAADRVQANTFYVY-V-E-----GDFFVSTDGGKSYTK 623 (763)
T ss_dssp CEEEECSSCCS----SCCEEESSTTSCCBCCBSCCCC--CSCEEECSSSTTCEEEE-E-T-----TEEEEESSTTSBCEE
T ss_pred cEEEEecccCC----CceEEeCCCCCCCeecCCCCCC--cceEEEeccCCCEEEEE-c-C-----CCEEEEeCCCcCccc
Confidence 46777663211 1344444556799888655543 122222 23 345543 2 1 234443334567998
Q ss_pred cCCCCC---CcccceeEEEE---CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCcc----ceEEEEE---CCE
Q psy11333 365 DVAPTT---SCRTSVGVAVL---DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRL----GVAVAVL---GGF 431 (482)
Q Consensus 365 ~~~~~~---~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~----~~~~~~~---~~~ 431 (482)
+...+| .... . +.+. .+.+|+.++. ..+++-+-...+|+.+..++.... .+..+.. .+.
T Consensus 624 ~~~~lp~~~~~~~-~-i~~~~~~~~~l~~~~~~------~~l~~S~D~G~tW~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 695 (763)
T 3a0f_A 624 KGNGLPCCWTYTG-T-PVTSNLRAGELWVSVKG------VGIYHSTDFGNTFTALAGSGSSLNPAVFSIGAPQTPNATET 695 (763)
T ss_dssp ECBTSCCSSCCCE-E-EEECSSSTTCEEEEETT------TEEEEESSTTSBCEECTTBTTTBEEEEEEEECCSSTTSSCE
T ss_pred cccCCCcccCccc-c-EEECCCCCCcEEEEcCC------CeEEEEcCCCCCceEccCCCcccccceeEEeeecCCCCCce
Confidence 733454 2111 1 2222 4788887642 135444434569999986554432 2222222 357
Q ss_pred EEEEc--CCCCCCCCCeEEEEeCCCCceeecC
Q psy11333 432 LYAIG--GSDGQSPLNTVERFDPKLNRWTAMA 461 (482)
Q Consensus 432 i~v~G--G~~~~~~~~~~~~y~~~~~~W~~~~ 461 (482)
||++| -.. ....+++=+-...+|+.+.
T Consensus 696 l~~~G~~~~~---~~~gl~~S~D~G~tW~~~~ 724 (763)
T 3a0f_A 696 LFLWGIPSAS---QPEGLYMSTDNGGLWTRLN 724 (763)
T ss_dssp EEEEEECSTT---SCSEEEEESSTTSCCEECS
T ss_pred EEEEEEcccC---CCcEEEEeCCCCCCcEecc
Confidence 99998 111 0135666655677899986
No 344
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=39.32 E-value=2.2e+02 Score=25.71 Aligned_cols=145 Identities=14% Similarity=0.108 Sum_probs=82.1
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCCeeecc--CCCCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCc
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVA--PMSKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQ 361 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~--~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 361 (482)
.++.||+... ..+.++++++....-..+. .+..| .++++- ++.||+..-.. ...++++++....
T Consensus 126 ~~g~ly~~d~-----~~~~I~~~~~dG~~~~~l~~~~l~~P---~~iavdp~~g~ly~td~~~----~~~I~r~~~dG~~ 193 (349)
T 3v64_C 126 VHDKLYWTDS-----GTSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN----TPRIEASSMDGSG 193 (349)
T ss_dssp TTTEEEEEET-----TTTEEEEEETTSCSCEEEECTTCSCE---EEEEEETTTTEEEEEECSS----SCEEEEEETTSCS
T ss_pred CCCeEEEEcC-----CCCeEEEEcCCCCceEEEEeCCCCCc---ceEEEecCcCeEEEeccCC----CCEEEEEeCCCCC
Confidence 3678887743 2247888888766543332 23333 244443 78899875321 3579999988655
Q ss_pred eeecCCCCCCcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEECCEEEEEcCCC
Q psy11333 362 WSCDVAPTTSCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVLGGFLYAIGGSD 439 (482)
Q Consensus 362 W~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~ 439 (482)
-+.+ .... .....++++. +++||+.-.. ...++++|+....-..+.... ...-.++++.++.||+.--.+
T Consensus 194 ~~~~-~~~~-~~~PnGla~d~~~~~lY~aD~~-----~~~I~~~~~dG~~~~~~~~~~-~~~P~giav~~~~ly~td~~~ 265 (349)
T 3v64_C 194 RRII-ADTH-LFWPNGLTIDYAGRRMYWVDAK-----HHVIERANLDGSHRKAVISQG-LPHPFAITVFEDSLYWTDWHT 265 (349)
T ss_dssp CEES-CCSS-CSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSS-CSSEEEEEEETTEEEEEETTT
T ss_pred cEEE-EECC-CCCcceEEEeCCCCEEEEEECC-----CCEEEEEeCCCCceEEEEeCC-CCCceEEEEECCEEEEecCCC
Confidence 4444 2111 1112345543 7899998532 357899988753322222111 112245566789999985432
Q ss_pred CCCCCCeEEEEeCCCC
Q psy11333 440 GQSPLNTVERFDPKLN 455 (482)
Q Consensus 440 ~~~~~~~~~~y~~~~~ 455 (482)
+.|.++|..+.
T Consensus 266 -----~~V~~~~~~~G 276 (349)
T 3v64_C 266 -----KSINSANKFTG 276 (349)
T ss_dssp -----TEEEEEETTTC
T ss_pred -----CeEEEEEccCC
Confidence 46777774333
No 345
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=38.60 E-value=85 Score=28.58 Aligned_cols=114 Identities=12% Similarity=0.144 Sum_probs=57.0
Q ss_pred CEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEE--CCEEEEEeccC----CCcccCeEEEEeCCCC
Q psy11333 335 DLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVL--DGFLYAVGGQD----GVQCLNHVERYDPKEN 408 (482)
Q Consensus 335 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~----~~~~~~~~~~yd~~~~ 408 (482)
..+|+.-.......-+.+++||+.+.+-... .+..... .++.. +..+|+..-.. .....+.+..||+.+.
T Consensus 16 ~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~---i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 16 NRIYVMDSVFMHLTESRVHVYDYTNGKFLGM---VPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GEEEEEECCGGGGGGCEEEEEETTTCCEEEE---EECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CEEEEECCCCCccccCeEEEEECCCCeEEEE---ecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 3577764321111235799999988765422 2222222 33333 45788875321 1112356889998765
Q ss_pred ceeecCCCCCC-----ccceEEEEE-CC-EEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 409 KWSRVAPMTTR-----RLGVAVAVL-GG-FLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 409 ~W~~~~~~~~~-----r~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
+-...-+.+.. ..-+.++.. +| .+|+.... ..+.+.+||+.+++
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~----~~~~v~v~d~~~~~ 142 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS----PATSIGIVDVAKGD 142 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES----SSEEEEEEETTTTE
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCC----CCCeEEEEECCCCc
Confidence 43221111111 122233333 44 67776421 12568889987664
No 346
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=38.49 E-value=71 Score=30.18 Aligned_cols=114 Identities=14% Similarity=-0.044 Sum_probs=60.4
Q ss_pred CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEE--CCEEEEEeccC----CCcccCeEEEEeCCC
Q psy11333 334 NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVL--DGFLYAVGGQD----GVQCLNHVERYDPKE 407 (482)
Q Consensus 334 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~----~~~~~~~~~~yd~~~ 407 (482)
...+||......+.. +.+.++|+.+++=... .+.+... +++.. +.++|+..-.. .....+.+.++|+.+
T Consensus 84 ~~~vyV~n~~~~~~~-~~VsVID~~t~~vv~~---I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 84 ARRVYIQDPAHFAAI-TQQFVIDGSTGRILGM---TDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp TTEEEEEECTTTCSS-EEEEEEETTTTEEEEE---EEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCEEEEECCCcCCCC-CeEEEEECCCCEEEEE---EECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 345777764322211 6899999999874422 2222222 33332 45688875210 011246799999998
Q ss_pred CceeecCCCC-CCc-----cceEEEEE-CC-EEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 408 NKWSRVAPMT-TRR-----LGVAVAVL-GG-FLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 408 ~~W~~~~~~~-~~r-----~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
.+-..--+++ .+| .-+.+++. +| ++|+..-. ..+.+.++|+.+.+
T Consensus 159 ~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~----~~~~VsVID~~t~k 211 (426)
T 3c75_H 159 FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS----PAPAVGVVDLEGKT 211 (426)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----SSCEEEEEETTTTE
T ss_pred CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC----CCCeEEEEECCCCe
Confidence 7643221222 111 12233333 44 68876421 12578888888664
No 347
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=37.17 E-value=78 Score=23.57 Aligned_cols=42 Identities=19% Similarity=0.280 Sum_probs=32.2
Q ss_pred HHHHHHHhc---cCCCCCHHHHHHHHhhCCCHHHHHHHHHHHHHh
Q psy11333 125 DICCEFLKR---QLDPSNCLGIRAFADTHSCRDLLRIADKFTQHN 166 (482)
Q Consensus 125 ~~~~~~i~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~~i~~~ 166 (482)
....+||-. .+..+++..++..|..+..+.|.+.|.+++..+
T Consensus 82 ~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 82 NILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp HHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred HHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 344445543 245578999999999999999999999988653
No 348
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=36.07 E-value=1.9e+02 Score=30.31 Aligned_cols=103 Identities=12% Similarity=0.042 Sum_probs=56.1
Q ss_pred CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeec
Q psy11333 334 NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRV 413 (482)
Q Consensus 334 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 413 (482)
++.+.+.|+.++ ++..||..+..-... . +....-.+++...|+.++.|+.+ ..+..||..+.+....
T Consensus 28 dg~~lAsgs~Dg-----~I~lw~~~~~~~~~~-~--~~~~~V~~l~fspg~~L~S~s~D-----~~v~lWd~~~~~~~~~ 94 (902)
T 2oaj_A 28 TQNLLAIATVTG-----EVHIYGQQQVEVVIK-L--EDRSAIKEMRFVKGIYLVVINAK-----DTVYVLSLYSQKVLTT 94 (902)
T ss_dssp TTTEEEEEETTS-----EEEEECSTTCEEEEE-C--SSCCCEEEEEEETTTEEEEEETT-----CEEEEEETTTCSEEEE
T ss_pred CCCEEEEEeCCC-----EEEEEeCCCcEEEEE-c--CCCCCEEEEEEcCCCEEEEEECc-----CeEEEEECCCCcEEEE
Confidence 667777887653 688888776553322 1 11111223333346666666543 4688899887654221
Q ss_pred CCCCCCccceEEEEE-CCEEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 414 APMTTRRLGVAVAVL-GGFLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 414 ~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
-. .+....+++.. ++..++.|+.+ ..+.+||..+.+
T Consensus 95 ~~--~~~~V~~v~~sp~g~~l~sgs~d-----g~V~lwd~~~~~ 131 (902)
T 2oaj_A 95 VF--VPGKITSIDTDASLDWMLIGLQN-----GSMIVYDIDRDQ 131 (902)
T ss_dssp EE--CSSCEEEEECCTTCSEEEEEETT-----SCEEEEETTTTE
T ss_pred Ec--CCCCEEEEEECCCCCEEEEEcCC-----CcEEEEECCCCc
Confidence 11 11111222222 56677777765 368888887665
No 349
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=35.82 E-value=38 Score=25.90 Aligned_cols=46 Identities=11% Similarity=0.122 Sum_probs=32.4
Q ss_pred HHHHHHHHhc---cCCCCCHHHHHHHHhhCCCHHHHHHHHHHHHHhHHH
Q psy11333 124 QDICCEFLKR---QLDPSNCLGIRAFADTHSCRDLLRIADKFTQHNFQE 169 (482)
Q Consensus 124 ~~~~~~~i~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~~i~~~~~~ 169 (482)
.....+||-. .+..+++..++..|..+..+.|.+.|.+|+..++..
T Consensus 73 f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~ 121 (135)
T 2yy9_A 73 FGLLLDFFYTGHLALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVG 121 (135)
T ss_dssp HHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC-----
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccC
Confidence 3444455543 345678999999999999999999999998777654
No 350
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=35.78 E-value=2.4e+02 Score=25.14 Aligned_cols=127 Identities=13% Similarity=0.159 Sum_probs=63.8
Q ss_pred eeEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCC-CC---c-ccceeEEEE-CCEEEEEeccCCCcccCeE
Q psy11333 328 VGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPT-TS---C-RTSVGVAVL-DGFLYAVGGQDGVQCLNHV 400 (482)
Q Consensus 328 ~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~---~-r~~~~~~~~-~~~lyv~GG~~~~~~~~~~ 400 (482)
.++++. +|++|+......... .+++.++ +.+-... +.. .. . ..-+++++. +|+||++.-.........+
T Consensus 20 ~~va~~~~g~~~v~~~~~~~~~-~~l~~~~--~g~~~~~-p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 20 GNITLTPDGRLFLSLHQFYQPE-MQVAELT--QDGLIPF-PPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp EEEEECTTSCEEEEECGGGCCS-CSEEEEE--TTEEEES-CCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred ceEEECCCCCEEEEeCCCCCCc-eEEEEEC--CCCeecC-CCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 345554 788998853211111 4577777 4433322 111 11 1 122344443 4899998521100013579
Q ss_pred EEEeCCCCceeecCCCC-----CCccceEEEEE--CCEEEEEcCCCCCCCCCeEEEEeCCCC-ceeec
Q psy11333 401 ERYDPKENKWSRVAPMT-----TRRLGVAVAVL--GGFLYAIGGSDGQSPLNTVERFDPKLN-RWTAM 460 (482)
Q Consensus 401 ~~yd~~~~~W~~~~~~~-----~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~y~~~~~-~W~~~ 460 (482)
.+||+.+++-...-.++ .......+++- ++.+|+..-.. .....+.+||+.+. .|..+
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~--~~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP--DDKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS--GGGCEEEEEETTTCCEEEEC
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc--CCCCeEEEEECCCCCEEEEe
Confidence 99999988743222221 11122344444 57899884310 01257899998754 45544
No 351
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=35.45 E-value=4.3e+02 Score=28.73 Aligned_cols=122 Identities=12% Similarity=0.068 Sum_probs=72.0
Q ss_pred eeEEEeCCCCCeeeccCCCCCCCceeEEEECCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcc-cceeEEEEC
Q psy11333 304 SVERYDPQSSDWKIVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCR-TSVGVAVLD 382 (482)
Q Consensus 304 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r-~~~~~~~~~ 382 (482)
.+..|+...++.+.+..-+..-.-.+++.++|+|.+.-| +.+.+|+...++.-+. .....+. ....+.+.+
T Consensus 865 ri~vf~v~~~kL~lv~~~~v~g~v~al~~~~g~Lla~ig-------~~l~vy~l~~~~~L~~-~~~~~~~i~~~~l~~~~ 936 (1158)
T 3ei3_A 865 RIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASIN-------STVRLYEWTTEKELRT-ECNHYNNIMALYLKTKG 936 (1158)
T ss_dssp EEEEEEEETTEEEEEEEEEESSCEEEEEEETTEEEEEET-------TEEEEEEECTTSCEEE-EEEECCCSCEEEEEEET
T ss_pred EEEEEEEECCEEEEEEEEEcCCcCEEEeeeCCEEEEEcC-------CEEEEEECCCCceEEE-EeeccccEEEEEEeccC
Confidence 577777766677766654544455677778997766544 4688888765542111 0000000 011233556
Q ss_pred CEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEECCEEEEEcC
Q psy11333 383 GFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVLGGFLYAIGG 437 (482)
Q Consensus 383 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG 437 (482)
+.|++.--..+ -.+..|+...++-..++.-..+|...++..+++.-++.+.
T Consensus 937 ~~I~vgD~~~S----v~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~t~l~aD 987 (1158)
T 3ei3_A 937 DFILVGDLMRS----VLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAE 987 (1158)
T ss_dssp TEEEEEESSBC----EEEEEEETTTTEEEEEEECCSCBCEEEEEEEETTEEEEEE
T ss_pred CEEEEEEhhhe----EEEEEEEcCCCeEEEEEeecccccEEEEEEEccCcEEEEc
Confidence 76554322221 2456799988888888877888888888777554344333
No 352
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=35.45 E-value=1.1e+02 Score=30.30 Aligned_cols=162 Identities=10% Similarity=-0.008 Sum_probs=89.9
Q ss_pred ceeEEEeCCCCCeee-ccCCCCCCCceeEEEE-CC-EEEEEecCCCCCCCCeEEEEeCCCCc-e---------eecCCCC
Q psy11333 303 SSVERYDPQSSDWKI-VAPMSKRRCGVGVAVL-ND-LLYAVGGHDGQSYLNSIERYDPQTNQ-W---------SCDVAPT 369 (482)
Q Consensus 303 ~~~~~~d~~~~~W~~-~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~-W---------~~~~~~~ 369 (482)
+.|.+.|..+.+... +..+|.+..-|++.+. +| .+|+.+.. .+++.+||..+.+ + .-. ...
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~-----s~~VsVid~~~~~~~~~~~l~~~~~v~-~~v 327 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKL-----SPTVTVLDVTRFDAVFYENADPRSAVV-AEP 327 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTT-----SSBEEEEEGGGHHHHHHSCCCGGGGEE-ECC
T ss_pred CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCC-----CCeEEEEECcccccccccccCcccceE-EEc
Confidence 458889999854433 3456667777888776 45 46666543 3679999998653 1 011 122
Q ss_pred CCc-ccceeEEEECCEEEEEeccCCCcccCeEEEEeCCC--------CceeecCCCCCCcc-ceEEEE------ECC-EE
Q psy11333 370 TSC-RTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKE--------NKWSRVAPMTTRRL-GVAVAV------LGG-FL 432 (482)
Q Consensus 370 ~~~-r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~--------~~W~~~~~~~~~r~-~~~~~~------~~~-~i 432 (482)
+.+ +-.|.+..-+|.+|+.-..+ +.+-+||..+ +.+..+..++..-. +|..+. -+| .+
T Consensus 328 ~vG~gP~h~aF~~dG~aY~t~~ld-----sqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l 402 (595)
T 1fwx_A 328 ELGLGPLHTAFDGRGNAYTSLFLD-----SQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWL 402 (595)
T ss_dssp BCCSCEEEEEECTTSEEEEEETTT-----TEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEE
T ss_pred CCCCCcceEEECCCCeEEEEEecC-----CcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEE
Confidence 222 22233333457888886543 4566677654 22544544433222 222221 133 67
Q ss_pred EEEcCCCCCCC-------CCeEEEEeCCCCceeecCCCCcCCCceeEEEE
Q psy11333 433 YAIGGSDGQSP-------LNTVERFDPKLNRWTAMAPMSTRRKHLGCAVF 475 (482)
Q Consensus 433 ~v~GG~~~~~~-------~~~~~~y~~~~~~W~~~~~~~~~r~~~~~~~~ 475 (482)
|+.-+.+.... -.+-..||.+.++-+.+...|..-.-|-++++
T Consensus 403 ~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m~lv~d~p~~~ePh~~~i~ 452 (595)
T 1fwx_A 403 VCLSKFSKDRFLNVGPLKPENDQLIDISGDKMVLVHDGPTFAEPHDAIAV 452 (595)
T ss_dssp EEEESCCTTSSCCCCSSCCEEEEEEECSSSSCEEEEEEEESSCCCCEEEE
T ss_pred EEcCCCCccccccCCCCCCCcceEEEcCCCcEEEEEEEcCCCCCCceEEc
Confidence 77766653322 13348899988887777766653333444433
No 353
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=34.80 E-value=2.5e+02 Score=25.10 Aligned_cols=65 Identities=14% Similarity=0.141 Sum_probs=36.4
Q ss_pred CCEEEEEecCCCCCCCCe-EEEEeCCCCceeecCCCCCCcccceeEEE-ECCEEEEEeccCCCcccCeEEEEeCCCC
Q psy11333 334 NDLLYAVGGHDGQSYLNS-IERYDPQTNQWSCDVAPTTSCRTSVGVAV-LDGFLYAVGGQDGVQCLNHVERYDPKEN 408 (482)
Q Consensus 334 ~~~iyv~GG~~~~~~~~~-~~~yd~~~~~W~~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~ 408 (482)
++.+.+.|+.++ + +..||..+.+-...-..-.....-.+++. -+++.++.|+.+ ..+..||..+.
T Consensus 206 ~g~~l~s~s~d~-----~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~iw~~~~~ 272 (355)
T 3vu4_A 206 KSDMVATCSQDG-----TIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDK-----WTLHVFEIFND 272 (355)
T ss_dssp TSSEEEEEETTC-----SEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETT-----CEEEEEESSCC
T ss_pred CCCEEEEEeCCC-----CEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECC-----CEEEEEEccCC
Confidence 777888888663 5 88999987754322010001111122222 267888888764 35777777543
No 354
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=34.22 E-value=2.9e+02 Score=25.73 Aligned_cols=154 Identities=17% Similarity=0.094 Sum_probs=0.0
Q ss_pred CcEEEE---eccccCCCCCceeEEEeCCC---------CCeeeccCCCCCCCceeEEEEC---CEEEEEecCCCCCCCCe
Q psy11333 287 GEVLFA---VGGWCSGDAISSVERYDPQS---------SDWKIVAPMSKRRCGVGVAVLN---DLLYAVGGHDGQSYLNS 351 (482)
Q Consensus 287 ~~~l~~---~GG~~~~~~~~~~~~~d~~~---------~~W~~~~~~~~~~~~~~~~~~~---~~iyv~GG~~~~~~~~~ 351 (482)
++.|++ .|+.. ..+..||..+ +.+.....+.........+.+. +.+++.|+.++ +
T Consensus 104 g~~lav~~~sgs~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg-----~ 173 (434)
T 2oit_A 104 NLTLSACMMSSEYG-----SIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADG-----S 173 (434)
T ss_dssp SCEEEEEEEETTTE-----EEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTS-----C
T ss_pred CCEEEEEEeccCCC-----ceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCC-----e
Q ss_pred EEEEeCCCCceeecCCCCCCcccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCc-----cceEEE
Q psy11333 352 IERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRR-----LGVAVA 426 (482)
Q Consensus 352 ~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r-----~~~~~~ 426 (482)
+..||..+..-... .......-......-+|+.++.|+.++ .+..||+....-..+....... ...++.
T Consensus 174 v~iwD~~~~~~~~~-~~~~~~~v~~v~wspdg~~lasgs~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~ 247 (434)
T 2oit_A 174 IAVLQVTETVKVCA-TLPSTVAVTSVCWSPKGKQLAVGKQNG-----TVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVL 247 (434)
T ss_dssp EEEEEESSSEEEEE-EECGGGCEEEEEECTTSSCEEEEETTS-----CEEEECTTCCEEEEECCCTTCCTTSCEEEEEEE
T ss_pred EEEEEcCCCcceee-ccCCCCceeEEEEcCCCCEEEEEcCCC-----cEEEEccCCcccccccCCcccCCCCceeEEEEE
Q ss_pred EECCEEEE---EcCCCCCCCCCeEEEEeCCCCc
Q psy11333 427 VLGGFLYA---IGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 427 ~~~~~i~v---~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
-..+..|+ ..|.........+.+|+..+..
T Consensus 248 w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 248 WIGTYVFAIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp EEETTEEEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred EecCceEEEEEccCCCccCCCCceEEEEeccCC
No 355
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=34.19 E-value=2.7e+02 Score=25.36 Aligned_cols=115 Identities=11% Similarity=-0.111 Sum_probs=60.7
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEEE--CCEEEEEecCCCC----CCCCeEEEEeCCCC
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAVL--NDLLYAVGGHDGQ----SYLNSIERYDPQTN 360 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~----~~~~~~~~yd~~~~ 360 (482)
++.+|+.-+...... ..+..||+.+.+- +..++.+... ..+.. +..+|+..-.... ...+.+.+||+.+.
T Consensus 32 ~~~~yv~~~~~~~~~-~~v~v~D~~t~~~--~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~ 107 (373)
T 2mad_H 32 GRRSYINLPAHHSAI-IQQWVLDAGSGSI--LGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF 107 (373)
T ss_pred CCEEEEeCCcccCCc-cEEEEEECCCCeE--EEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC
Confidence 467888865211111 1789999988764 3445544433 44443 4578887532111 12367899999876
Q ss_pred ceeecCCCCC-Ccc-----cceeEEE--ECCEEEEEeccCCCcccCeEEEEeCCCCcee
Q psy11333 361 QWSCDVAPTT-SCR-----TSVGVAV--LDGFLYAVGGQDGVQCLNHVERYDPKENKWS 411 (482)
Q Consensus 361 ~W~~~~~~~~-~~r-----~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 411 (482)
+-... -+.+ .+| ....++. -+..+|+..-.. .+.+..+| .+.+-.
T Consensus 108 ~~~~~-i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~----~~~v~viD-~t~~~~ 160 (373)
T 2mad_H 108 LPIAD-IELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA----GPAVGLVV-QGGSSD 160 (373)
T ss_pred cEEEE-EECCCccccccCCCccceEECCCCCEEEEEecCC----CCeEEEEE-CCCCEE
Confidence 53221 1121 111 1112222 345677764211 25688899 776543
No 356
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=33.74 E-value=4.9e+02 Score=28.23 Aligned_cols=158 Identities=11% Similarity=0.104 Sum_probs=83.0
Q ss_pred eeEEEeCCCCCeeeccC--CCCCCCceeEEEE--C---CEEEEEec-CCC----CCCCCeEEEEeCCCCceeecCCCCCC
Q psy11333 304 SVERYDPQSSDWKIVAP--MSKRRCGVGVAVL--N---DLLYAVGG-HDG----QSYLNSIERYDPQTNQWSCDVAPTTS 371 (482)
Q Consensus 304 ~~~~~d~~~~~W~~~~~--~~~~~~~~~~~~~--~---~~iyv~GG-~~~----~~~~~~~~~yd~~~~~W~~~~~~~~~ 371 (482)
.+..+||. +|+.+.. +...-...+++.+ . ...+++|- ... ......+..|+....+.+.+ ...+.
T Consensus 808 ~i~lidp~--t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv-~~~~v 884 (1158)
T 3ei3_A 808 NLLIIDQH--TFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTV-AEKEV 884 (1158)
T ss_dssp EEEEEETT--TCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEE-EEEEE
T ss_pred EEEEEeCC--CCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEE-EEEEc
Confidence 45567775 4555442 3322223333332 2 24566663 111 11234577777766666655 22222
Q ss_pred cccceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccce-EEEEECCEEEEEcCCCCCCCCCeEEEE
Q psy11333 372 CRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGV-AVAVLGGFLYAIGGSDGQSPLNTVERF 450 (482)
Q Consensus 372 ~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~-~~~~~~~~i~v~GG~~~~~~~~~~~~y 450 (482)
.-.-.+++.++|++.+.-| ..+..|+...++.-....-..+.... .+.+.++.|+ +|.... .-.+..|
T Consensus 885 ~g~v~al~~~~g~Lla~ig-------~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~-vgD~~~---Sv~~~~y 953 (1158)
T 3ei3_A 885 KGAVYSMVEFNGKLLASIN-------STVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFIL-VGDLMR---SVLLLAY 953 (1158)
T ss_dssp SSCEEEEEEETTEEEEEET-------TEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEE-EEESSB---CEEEEEE
T ss_pred CCcCEEEeeeCCEEEEEcC-------CEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEE-EEEhhh---eEEEEEE
Confidence 2234567788998776655 46788887765432211000011111 2224466554 444321 1245779
Q ss_pred eCCCCceeecCCCCcCCCceeEEEE
Q psy11333 451 DPKLNRWTAMAPMSTRRKHLGCAVF 475 (482)
Q Consensus 451 ~~~~~~W~~~~~~~~~r~~~~~~~~ 475 (482)
++..++-..++.-..+|+.-++..+
T Consensus 954 ~~~~~~L~~~a~D~~~~~vta~~~l 978 (1158)
T 3ei3_A 954 KPMEGNFEEIARDFNPNWMSAVEIL 978 (1158)
T ss_dssp ETTTTEEEEEEECCSCBCEEEEEEE
T ss_pred EcCCCeEEEEEeecccccEEEEEEE
Confidence 9999999999888888876665544
No 357
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=32.99 E-value=2.3e+02 Score=25.86 Aligned_cols=107 Identities=15% Similarity=0.156 Sum_probs=55.0
Q ss_pred CCEEEEEecCCCCCCCCeEEEEeCCCCceeec--CCCCCCcccce-eEEE---------ECCEEEEEeccCCCcccCeEE
Q psy11333 334 NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCD--VAPTTSCRTSV-GVAV---------LDGFLYAVGGQDGVQCLNHVE 401 (482)
Q Consensus 334 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~--~~~~~~~r~~~-~~~~---------~~~~lyv~GG~~~~~~~~~~~ 401 (482)
++.+.+.|+.+ .++..||..+..-... ...+.-....- ++.. .++++++.||.++ ++.
T Consensus 100 ~~~~las~~~d-----~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~-----tv~ 169 (393)
T 4gq1_A 100 YSLFLACVCQD-----NTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC-----TLI 169 (393)
T ss_dssp EEEEEEEEETT-----SCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS-----EEE
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC-----eEE
Confidence 34455556554 4688888877653321 02222111111 2222 2688999998753 577
Q ss_pred EEeCCCCceeecCCCCCCccceEEEEE-CC-EEEEEcCCCCCCCCCeEEEEeCCCCc
Q psy11333 402 RYDPKENKWSRVAPMTTRRLGVAVAVL-GG-FLYAIGGSDGQSPLNTVERFDPKLNR 456 (482)
Q Consensus 402 ~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~y~~~~~~ 456 (482)
.||..+..-.... ........+++.. ++ .+++.|+.+ ..+.+||..+.+
T Consensus 170 ~Wd~~~~~~~~~~-~~~~~~v~~v~~~p~~~~~l~~~~~d-----~~v~~wd~~t~~ 220 (393)
T 4gq1_A 170 IWRLTDEGPILAG-YPLSSPGISVQFRPSNPNQLIVGERN-----GNIRIFDWTLNL 220 (393)
T ss_dssp EEEEETTEEEEEE-EECSSCEEEEEEETTEEEEEEEEETT-----SEEEEEETTCCC
T ss_pred EEECCCCceeeee-cCCCCCcEEEEECCCCCceEEecCCC-----CEEEEEECCCCc
Confidence 7887654321111 1111112233333 44 467777765 468888887654
No 358
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=32.92 E-value=1.6e+02 Score=27.94 Aligned_cols=63 Identities=16% Similarity=0.186 Sum_probs=39.3
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeee-----cc-CCC-CCCCceeEEEECCEEEEEecCCCCCCCCeEEEEeCCC
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKI-----VA-PMS-KRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQT 359 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~-----~~-~~~-~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~ 359 (482)
++++|+|-| +..|+||..+++-.. +. ..| .+..--++...++++|.+-| +..++||..+
T Consensus 367 ~~k~yfFkG-------~~yw~yd~~~~~~~~gYPk~I~~~fpgip~~iDAA~~~~g~~YFFkg-------~~ywr~d~~~ 432 (450)
T 1su3_A 367 TGKTYFFVA-------NKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFMKDGFFYFFHG-------TRQYKFDPKT 432 (450)
T ss_dssp TTEEEEEET-------TEEEEEETTTTEECSSCSEEHHHHSTTSCSCCSEEEEETTEEEEEET-------TEEEEEETTT
T ss_pred CCeEEEEeC-------CEEEEEeCCCccccCCCCcchhhcCCCCCCCccEEEEcCCeEEEEeC-------CEEEEEECCc
Confidence 589999877 578999987654321 11 011 12112233346899999987 4578888877
Q ss_pred Ccee
Q psy11333 360 NQWS 363 (482)
Q Consensus 360 ~~W~ 363 (482)
++=.
T Consensus 433 ~~v~ 436 (450)
T 1su3_A 433 KRIL 436 (450)
T ss_dssp TEEE
T ss_pred ceEe
Confidence 6533
No 359
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=32.87 E-value=86 Score=22.86 Aligned_cols=40 Identities=20% Similarity=0.176 Sum_probs=30.9
Q ss_pred HHHHHHHhc---cCCCCCHHHHHHHHhhCCCHHHHHHHHHHHH
Q psy11333 125 DICCEFLKR---QLDPSNCLGIRAFADTHSCRDLLRIADKFTQ 164 (482)
Q Consensus 125 ~~~~~~i~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~~i~ 164 (482)
....+|+-. .+..+++..++..|..+..+.|.+.|.+|+.
T Consensus 73 ~~ll~~~Yt~~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 73 QKLLEFIYTGTLNLDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp HHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 334445543 2455789999999999999999999998874
No 360
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=32.61 E-value=2e+02 Score=28.75 Aligned_cols=104 Identities=9% Similarity=-0.051 Sum_probs=52.8
Q ss_pred eeEEEeCCCCCeeeccCCCCCC--CceeEEE-ECCEEEEEecCCCC----CCCCeEEEEeCCCCceeecCCCCCCc--cc
Q psy11333 304 SVERYDPQSSDWKIVAPMSKRR--CGVGVAV-LNDLLYAVGGHDGQ----SYLNSIERYDPQTNQWSCDVAPTTSC--RT 374 (482)
Q Consensus 304 ~~~~~d~~~~~W~~~~~~~~~~--~~~~~~~-~~~~iyv~GG~~~~----~~~~~~~~yd~~~~~W~~~~~~~~~~--r~ 374 (482)
.++.+|+.+.+-..+-...... .-.+.+. -+|+..++++.+.. ....+++.||..+.+-+.+ ...... +.
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l-~~~~~~~~~~ 116 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSL-DPPEVSNAKL 116 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEEC-CCTTCCSCCC
T ss_pred CEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEec-cCCccccccc
Confidence 5778888777654332211110 1122222 26766566544322 1246899999998876656 322211 11
Q ss_pred ceeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecC
Q psy11333 375 SVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVA 414 (482)
Q Consensus 375 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 414 (482)
......-+|+.++++.. ..++.+|..+.+...+.
T Consensus 117 ~~~~~SPdG~~la~~~~------~~i~~~~~~~g~~~~~~ 150 (723)
T 1xfd_A 117 QYAGWGPKGQQLIFIFE------NNIYYCAHVGKQAIRVV 150 (723)
T ss_dssp SBCCBCSSTTCEEEEET------TEEEEESSSSSCCEEEE
T ss_pred cccEECCCCCEEEEEEC------CeEEEEECCCCceEEEe
Confidence 11222335554455432 36777877766555443
No 361
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=31.72 E-value=1.2e+02 Score=22.30 Aligned_cols=42 Identities=19% Similarity=0.229 Sum_probs=32.2
Q ss_pred HHHHHHHHHhc---cCCCCCHHHHHHHHhhCCCHHHHHHHHHHHH
Q psy11333 123 IQDICCEFLKR---QLDPSNCLGIRAFADTHSCRDLLRIADKFTQ 164 (482)
Q Consensus 123 L~~~~~~~i~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~~i~ 164 (482)
......+|+-. .+..+++..++..|..+..+.|.+.|.+|+.
T Consensus 73 ~f~~ll~~~Ytg~~~i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 73 GLGQVLEFMYTAKLSLSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp HHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 33445555553 3455789999999999999999999998874
No 362
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=30.89 E-value=4.4e+02 Score=26.76 Aligned_cols=107 Identities=14% Similarity=0.201 Sum_probs=59.7
Q ss_pred EEEEeCCCCceeecCCCCCCcccceeEEEE-CCEEEEEeccCCC----cccCeEEEEeCCCCceeecCCCCCC----ccc
Q psy11333 352 IERYDPQTNQWSCDVAPTTSCRTSVGVAVL-DGFLYAVGGQDGV----QCLNHVERYDPKENKWSRVAPMTTR----RLG 422 (482)
Q Consensus 352 ~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~----~~~~~~~~yd~~~~~W~~~~~~~~~----r~~ 422 (482)
+++=.-.-.+|+.+ ..+|.....+.++.. ++.+|+..+.... .....+++++-...+|+.+.+.|.. +++
T Consensus 224 v~~S~DgG~tW~~~-~~~p~~~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~~~~~~~~~~~ 302 (737)
T 2cn3_A 224 IYRSTDGGVTWKAV-PGQPKGLLPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPIPYSSSDNRFC 302 (737)
T ss_dssp EEEESSTTSCCEEC-TTCCCSSEEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCSSCTTSTTCCSE
T ss_pred EEEEcCCCCceEEC-CCCCCcccceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccCCCCCCcccccc
Confidence 43333345679998 656554333333333 7899988653211 1234688999999999999876542 444
Q ss_pred eEEEEE----CCEEEEEcCCCCCCCCCeEEEEeCCCCceeec
Q psy11333 423 VAVAVL----GGFLYAIGGSDGQSPLNTVERFDPKLNRWTAM 460 (482)
Q Consensus 423 ~~~~~~----~~~i~v~GG~~~~~~~~~~~~y~~~~~~W~~~ 460 (482)
++.+.+ .+.||+.+.... ..-..+++=.-.-.+|+.+
T Consensus 303 ~~~i~v~p~~~~~ly~~~~~~~-~~~~~l~~S~DgG~tW~~~ 343 (737)
T 2cn3_A 303 FAGLAVDRQNPDIIMVTSMNAW-WPDEYIFRSTDGGATWKNI 343 (737)
T ss_dssp EEEEEECTTCTTCEEEEEECCC-SSCCCEEEESSTTSSCEES
T ss_pred cccEEEcCCCCCEEEEEecccC-CCCccEEEeCCCCccccch
Confidence 443333 357888865311 0012233332334578776
No 363
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=30.88 E-value=3.2e+02 Score=25.17 Aligned_cols=143 Identities=13% Similarity=0.089 Sum_probs=81.8
Q ss_pred CCcEEEEeccccCCCCCceeEEEeCCCCCeeecc--CCCCCCCceeEEE--ECCEEEEEecCCCCCCCCeEEEEeCCCCc
Q psy11333 286 RGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVA--PMSKRRCGVGVAV--LNDLLYAVGGHDGQSYLNSIERYDPQTNQ 361 (482)
Q Consensus 286 ~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~--~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 361 (482)
.++.||+.... ...++++|+....-..+. .+..|+ ++++ .++.||+.--. ....+++.++....
T Consensus 169 ~~~~lY~~d~~-----~~~I~~~~~~g~~~~~l~~~~~~~P~---~iavdp~~g~ly~td~~----~~~~I~~~~~dG~~ 236 (400)
T 3p5b_L 169 IHSNIYWTDSV-----LGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVD 236 (400)
T ss_dssp TTTEEEEEETT-----TTEEEEECTTTCSEEEEEECSSCCEE---EEEEETTTTEEEEEECS----SSCCEEEEETTSCS
T ss_pred cCCceEEEECC-----CCeEEEEeCCCCceEEEEeCCCCCcc---eEEEecccCeEEEEeCC----CCCEEEEEeCCCCc
Confidence 36788887532 246888888877654432 233333 4445 37889987521 12468999987654
Q ss_pred eeec-CCCCCCcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCCceeecCCC-CCCccceEEEEECCEEEEEcC
Q psy11333 362 WSCD-VAPTTSCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPM-TTRRLGVAVAVLGGFLYAIGG 437 (482)
Q Consensus 362 W~~~-~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-~~~r~~~~~~~~~~~i~v~GG 437 (482)
=+.+ ...+. ...++++. +++||+.-.. .+.++++|+....-..+... ..-....++++.++.||+.--
T Consensus 237 ~~~~~~~~l~---~P~glavd~~~~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~ 308 (400)
T 3p5b_L 237 IYSLVTENIQ---WPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDI 308 (400)
T ss_dssp CEEEECSSCS---CEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEES
T ss_pred cEEEEECCCC---ceEEEEEEeCCCEEEEEECC-----CCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecC
Confidence 3333 11121 22345554 6899998532 36799999875433333221 111223466678899999863
Q ss_pred CCCCCCCCeEEEEeCC
Q psy11333 438 SDGQSPLNTVERFDPK 453 (482)
Q Consensus 438 ~~~~~~~~~~~~y~~~ 453 (482)
.+ +.|+++|..
T Consensus 309 ~~-----~~V~~~~~~ 319 (400)
T 3p5b_L 309 IN-----EAIFSANRL 319 (400)
T ss_dssp SS-----CSEEEEESS
T ss_pred CC-----CeEEEEEcC
Confidence 22 357777743
No 364
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=29.55 E-value=1.2e+02 Score=30.29 Aligned_cols=100 Identities=11% Similarity=0.083 Sum_probs=51.4
Q ss_pred EEEECCEEEEEecCCCCCCCCeEEEEeCCCC----------ceeecCCCCCCcccceeEEE-ECCEEEEEeccCCCcccC
Q psy11333 330 VAVLNDLLYAVGGHDGQSYLNSIERYDPQTN----------QWSCDVAPTTSCRTSVGVAV-LDGFLYAVGGQDGVQCLN 398 (482)
Q Consensus 330 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~----------~W~~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~ 398 (482)
++...+.+|++-| +..++++.... .|..+ |.. -.++... .++++|++-| +
T Consensus 449 it~~rg~~yfFKg-------~~yWr~~~~~~~~~~P~~Is~~wp~L----P~~-IDAA~~~~~~~k~yFFkG-------~ 509 (631)
T 1ck7_A 449 IAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPEL----PEK-IDAVYEAPQEEKAVFFAG-------N 509 (631)
T ss_dssp EEECSSSEEEECS-------SEEEEESCTTSCCEEEEEGGGTCTTS----CSS-CSBCCEETTTTEEEEEET-------T
T ss_pred eEecCCcEEEEcC-------CEEEEEcCCCCCCCCceeccccCCCC----Ccc-ceEEEEECCCCEEEEEec-------C
Confidence 4446889999977 34566655432 24333 221 1122222 2578999866 4
Q ss_pred eEEEEeCCC--Cce-eecCC--CCCC-ccceEEEE--ECCEEEEEcCCCCCCCCCeEEEEeCCCC
Q psy11333 399 HVERYDPKE--NKW-SRVAP--MTTR-RLGVAVAV--LGGFLYAIGGSDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 399 ~~~~yd~~~--~~W-~~~~~--~~~~-r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~y~~~~~ 455 (482)
..|+|+..+ ..+ ..+.. +|.. ..--++.. .++++|++-| +..|+||..++
T Consensus 510 ~yWry~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG-------~~ywryd~~~~ 567 (631)
T 1ck7_A 510 EYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKK 567 (631)
T ss_dssp EEEEEETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEET-------TEEEEEETTTT
T ss_pred EEEEECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEEC-------CEEEEEcCCcc
Confidence 577776421 001 01111 1211 11112222 3789999988 46899997654
No 365
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=28.86 E-value=4.5e+02 Score=26.21 Aligned_cols=116 Identities=11% Similarity=-0.017 Sum_probs=54.5
Q ss_pred CcEEEEeccccCCCCCceeEEEe----CCCCCeeeccC----CCCCCCc---e-eEEE-ECCE-EEEEec-CCCCCCCCe
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYD----PQSSDWKIVAP----MSKRRCG---V-GVAV-LNDL-LYAVGG-HDGQSYLNS 351 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d----~~~~~W~~~~~----~~~~~~~---~-~~~~-~~~~-iyv~GG-~~~~~~~~~ 351 (482)
++++++.... .......++.+| +.+.++..+.. ....... + ..+. -+|. |++..+ .++ ...
T Consensus 263 D~~~~~~~~~-~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g---~~~ 338 (719)
T 1z68_A 263 DERVCLQWLK-RVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDG---YKH 338 (719)
T ss_dssp SSEEEEEEEE-SSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTS---CEE
T ss_pred CCeEEEEEec-cccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCC---ceE
Confidence 4555554221 122334688899 77766654431 1111111 0 2222 2444 555332 222 357
Q ss_pred EEEEeCCCCceeecCCCCCCcccceeEEEECCEEEEEeccC-CCcccCeEEEEeCCCC
Q psy11333 352 IERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQD-GVQCLNHVERYDPKEN 408 (482)
Q Consensus 352 ~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~yd~~~~ 408 (482)
++.+|..+++.+.+ ............. -++.||..+... .......++..+..+.
T Consensus 339 l~~~~~~~~~~~~l-t~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g 394 (719)
T 1z68_A 339 IHYIKDTVENAIQI-TSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSY 394 (719)
T ss_dssp EEEESSCSTTCEEC-SCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSS
T ss_pred EEEEECCCCceEec-ccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCC
Confidence 99999988887777 3222111122222 345566655330 1112345677776444
No 366
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=28.40 E-value=78 Score=23.32 Aligned_cols=42 Identities=12% Similarity=0.184 Sum_probs=30.5
Q ss_pred HHHHHHHhc---cCCCCCHHHHHHHHhhCCCHHHHHHHHHHHHHh
Q psy11333 125 DICCEFLKR---QLDPSNCLGIRAFADTHSCRDLLRIADKFTQHN 166 (482)
Q Consensus 125 ~~~~~~i~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~~i~~~ 166 (482)
....+|+-. .+..+++..++..|..+..+.|.+.|.+|+.+.
T Consensus 73 ~~ll~~iYtg~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 73 GLLLDFFYTGHLALTSGNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp HHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred HHHHHHHcCCCCccCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 344455543 245578999999999999999999999887654
No 367
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=26.90 E-value=1.8e+02 Score=27.03 Aligned_cols=69 Identities=19% Similarity=0.124 Sum_probs=41.9
Q ss_pred CCEEEEEeccC---C-CcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CC--EEEEEcCCCCCCCCCeEEEEeCCC
Q psy11333 382 DGFLYAVGGQD---G-VQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GG--FLYAIGGSDGQSPLNTVERFDPKL 454 (482)
Q Consensus 382 ~~~lyv~GG~~---~-~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~--~i~v~GG~~~~~~~~~~~~y~~~~ 454 (482)
++++|+.-+.+ . ...-+.++++|+++.+-. ...+.+....++++. ++ .+|+.-+.+ +++.+||..+
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~--~~i~vg~~~~~lavs~D~~~~ly~tn~~~-----~~VsViD~~t 363 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERL--AKFEMGHEIDSINVSQDEKPLLYALSTGD-----KTLYIHDAES 363 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE--EEEEEEEEECEEEECSSSSCEEEEEETTT-----TEEEEEETTT
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEE--EEEECCCCcceEEECCCCCeEEEEEcCCC-----CeEEEEECCC
Confidence 68999974321 1 112368999999877643 333333333344443 55 477764432 5899999987
Q ss_pred Cce
Q psy11333 455 NRW 457 (482)
Q Consensus 455 ~~W 457 (482)
.+-
T Consensus 364 ~k~ 366 (386)
T 3sjl_D 364 GEE 366 (386)
T ss_dssp CCE
T ss_pred CcE
Confidence 763
No 368
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=26.54 E-value=1.6e+02 Score=25.81 Aligned_cols=16 Identities=31% Similarity=0.389 Sum_probs=11.2
Q ss_pred eeEEEECCEEEEEecc
Q psy11333 376 VGVAVLDGFLYAVGGQ 391 (482)
Q Consensus 376 ~~~~~~~~~lyv~GG~ 391 (482)
|+++.-+|++|.+|-.
T Consensus 191 hs~al~~G~v~~wG~n 206 (282)
T 3qhy_B 191 HSLALKDGKVIAWGDN 206 (282)
T ss_dssp EEEEEETTEEEEEECC
T ss_pred EEEEEECCeEEEEECC
Confidence 4444478999999853
No 369
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=26.37 E-value=66 Score=15.78 Aligned_cols=20 Identities=30% Similarity=0.441 Sum_probs=14.7
Q ss_pred HHHHHHhhCCCHHHHHHHHH
Q psy11333 142 GIRAFADTHSCRDLLRIADK 161 (482)
Q Consensus 142 ~~~~~~~~~~~~~L~~~~~~ 161 (482)
.+.-++..++.++|...|++
T Consensus 3 kvmcyaqrhsspellrrcld 22 (26)
T 2plx_B 3 KVMCYAQRHSSPELLRRCLD 22 (26)
T ss_dssp HHHHHHBCCCCHHHHHHHHH
T ss_pred eEEeehhhcCCHHHHHHHHh
Confidence 44567778888888887765
No 370
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=26.12 E-value=1.6e+02 Score=27.09 Aligned_cols=86 Identities=6% Similarity=0.028 Sum_probs=53.9
Q ss_pred CCEEEEEec-c-CC-CcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CC-EEEEEcC-CCCCCCCCeEEEEeCCCC
Q psy11333 382 DGFLYAVGG-Q-DG-VQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GG-FLYAIGG-SDGQSPLNTVERFDPKLN 455 (482)
Q Consensus 382 ~~~lyv~GG-~-~~-~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~i~v~GG-~~~~~~~~~~~~y~~~~~ 455 (482)
++++|+... . .. ....+.+.++|+.+.+ .+..++.+...++++.. +| ++|+..+ .+ +++.++|+.
T Consensus 275 g~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~--vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~-----~~VsVID~~-- 345 (368)
T 1mda_H 275 TDGIMILTVEHSRSCLAAAENTSSVTASVGQ--TSGPISNGHDSDAIIAAQDGASDNYANSAGT-----EVLDIYDAA-- 345 (368)
T ss_dssp TTEEEEEEEECSSCTTSCEEEEEEEESSSCC--EEECCEEEEEECEEEECCSSSCEEEEEETTT-----TEEEEEESS--
T ss_pred CCEEEEEeccccCcccccCCCEEEEECCCCe--EEEEEECCCCcceEEECCCCCEEEEEccCCC-----CeEEEEECC--
Confidence 467888632 1 10 0001234599987764 45666666655666555 45 4777765 23 689999987
Q ss_pred ceeecCCCCcCCCceeEEEEc
Q psy11333 456 RWTAMAPMSTRRKHLGCAVFV 476 (482)
Q Consensus 456 ~W~~~~~~~~~r~~~~~~~~~ 476 (482)
+|+.+..++.++.-+++++.+
T Consensus 346 t~kvv~~I~vg~~P~~i~~~~ 366 (368)
T 1mda_H 346 SDQDQSSVELDKGPESLSVQN 366 (368)
T ss_dssp SCEEEEECCCCSCCCEEECCC
T ss_pred CCcEEEEEECCCCCCEEEeec
Confidence 577788888888777776543
No 371
>3fcs_A Integrin, alpha 2B; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens}
Probab=26.08 E-value=6.1e+02 Score=26.84 Aligned_cols=152 Identities=22% Similarity=0.210 Sum_probs=74.5
Q ss_pred CceeEEEECCEEEEEecCCCCCCCCeEEE---------EeCCCCceeecC------C---CCCCcccceeEEEE--CC--
Q psy11333 326 CGVGVAVLNDLLYAVGGHDGQSYLNSIER---------YDPQTNQWSCDV------A---PTTSCRTSVGVAVL--DG-- 383 (482)
Q Consensus 326 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~---------yd~~~~~W~~~~------~---~~~~~r~~~~~~~~--~~-- 383 (482)
.++++...++...++|......+.-.+.. |++.+..|.... . .+.....++++++- ++
T Consensus 169 ~GfSa~~t~d~~~~lGApGa~~W~G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~G~sva~gD~~gDG 248 (959)
T 3fcs_A 169 AGFSSVVTQAGELVLGAPGGYYFLGLLAQAPVADIFSSYRPGILLWHVSSQSLSFDSSNPEYFDGYWGYSVAVGEFDGDL 248 (959)
T ss_dssp BTSEEEECTTCEEEEEETTHHHHTCEEEEEEHHHHHHHCCTTCCSCCCTTCEECCCCCCGGGTTCCTTSEEEEECCSSCS
T ss_pred CCcceEEcCCCCEEEeCCcccCCCcEEEEeecccccccccccccccccCccccccccCCcccCCCccccEEEEEEECCCC
Confidence 35567776554467887654444445553 444444442110 1 11112234566553 22
Q ss_pred -E-EEEEeccCCCcccCeEEEEeCCCCceeecCCC----CCCccceEEEEE----CC--EEEEEcCCCC--C------CC
Q psy11333 384 -F-LYAVGGQDGVQCLNHVERYDPKENKWSRVAPM----TTRRLGVAVAVL----GG--FLYAIGGSDG--Q------SP 443 (482)
Q Consensus 384 -~-lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~----~~~r~~~~~~~~----~~--~i~v~GG~~~--~------~~ 443 (482)
. .|++|+-......-.++.|+ ..|.....+ ...++++++++. +| -| ++|--.. . ..
T Consensus 249 ~~d~~vvGaPr~~~~~G~V~i~~---~~~~~~~~l~G~q~gs~fG~sva~gD~NgDG~~DL-vVGAP~~~~~~~~~~~~~ 324 (959)
T 3fcs_A 249 NTTEYVVGAPTWSWTLGAVEILD---SYYQRLHRLRGEQMASYFGHSVAVTDVNGDGRHDL-LVGAPLYMESRADRKLAE 324 (959)
T ss_dssp SSCEEEEEETTHHHHTCEEEEEC---TTCCEEEEEECSSTTSCTTSEEEEECCSSSSSCEE-EEEETTCEEEETTEEEEE
T ss_pred CeeEEEEECCcccCCcceEEEEC---CCceEEEEeccccCCCCceeEEEEEEecCCCccce-eEeccccccccccccccC
Confidence 2 78888743221223466664 356544322 234566666655 22 34 5553210 0 12
Q ss_pred CCeEEEEeCCCC--ceee----c-CCCCcCCCceeEEEEcCCCCC
Q psy11333 444 LNTVERFDPKLN--RWTA----M-APMSTRRKHLGCAVFVGDNGA 481 (482)
Q Consensus 444 ~~~~~~y~~~~~--~W~~----~-~~~~~~r~~~~~~~~~~~~~~ 481 (482)
...+++|.-... .|.. + +.-+..|++.+++++++-+||
T Consensus 325 ~G~VyV~~~~~g~~~~~~~~~~l~G~~~~~~FG~sva~~gD~ngD 369 (959)
T 3fcs_A 325 VGRVYLFLQPRGPHALGAPSLLLTGTQLYGRFGSAIAPLGDLDRD 369 (959)
T ss_dssp CBEEEEECCCSTTCCCCSCSEEEECCSTTCCBTSEEEEEECSSCS
T ss_pred CceEEEEecCCCCCcccccceEEecccCCCCCceeEEeeecCCCC
Confidence 356888865332 3422 2 222357888888878776665
No 372
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=25.46 E-value=3.6e+02 Score=23.92 Aligned_cols=124 Identities=15% Similarity=0.100 Sum_probs=62.7
Q ss_pred CCCcEEEEeccccCCCCCceeEEEeCCCCCeeeccCC-CC----CCCceeEEEE-CCEEEEEecCCCCCCCCeEEEEeCC
Q psy11333 285 RRGEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPM-SK----RRCGVGVAVL-NDLLYAVGGHDGQSYLNSIERYDPQ 358 (482)
Q Consensus 285 ~~~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~-~~----~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~ 358 (482)
..++++|+......... ..++.++ +.+....+.. .. -..-+++++- ++.||++.-.........+.+||+.
T Consensus 25 ~~~g~~~v~~~~~~~~~-~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~ 101 (343)
T 2qe8_A 25 TPDGRLFLSLHQFYQPE-MQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTL 101 (343)
T ss_dssp CTTSCEEEEECGGGCCS-CSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETT
T ss_pred CCCCCEEEEeCCCCCCc-eEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECC
Confidence 34678888753221121 4677777 4443332221 01 1122344443 5789998521100012579999999
Q ss_pred CCcee-ecC-C-CC-CCcccceeEEEE--CCEEEEEeccCCCcccCeEEEEeCCCC-ceeec
Q psy11333 359 TNQWS-CDV-A-PT-TSCRTSVGVAVL--DGFLYAVGGQDGVQCLNHVERYDPKEN-KWSRV 413 (482)
Q Consensus 359 ~~~W~-~~~-~-~~-~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~-~W~~~ 413 (482)
+++-. .+. + .. +.......+++. ++.+|+..... .....+.+||+.+. .|..+
T Consensus 102 tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~--~~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 102 NNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP--DDKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp TTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS--GGGCEEEEEETTTCCEEEEC
T ss_pred CCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc--CCCCeEEEEECCCCCEEEEe
Confidence 88733 331 1 11 111122445554 57899884310 02357889998754 45544
No 373
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=25.32 E-value=1.4e+02 Score=21.94 Aligned_cols=41 Identities=12% Similarity=-0.018 Sum_probs=31.4
Q ss_pred HHHHHHHhc---cCCCCCHHHHHHHHhhCCCHHHHHHHHHHHHH
Q psy11333 125 DICCEFLKR---QLDPSNCLGIRAFADTHSCRDLLRIADKFTQH 165 (482)
Q Consensus 125 ~~~~~~i~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~~i~~ 165 (482)
....+|+-. .++.+++..++..|..+..+.|.+.|.+++..
T Consensus 76 ~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 119 (121)
T 1buo_A 76 QQILEYAYTATLQAKAEDLDDLLYAAEILEIEYLEEQCLKMLET 119 (121)
T ss_dssp HHHHHHHHHSCCCCCGGGHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCcCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 344455543 23456889999999999999999999998864
No 374
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=25.07 E-value=3.7e+02 Score=23.98 Aligned_cols=55 Identities=24% Similarity=0.224 Sum_probs=27.0
Q ss_pred ceeEEEeCC-CCCeeeccCC--CC-CCCceeEEEE-CC-EEEEEecCCCCCCCCeEEEE--eCCCCce
Q psy11333 303 SSVERYDPQ-SSDWKIVAPM--SK-RRCGVGVAVL-ND-LLYAVGGHDGQSYLNSIERY--DPQTNQW 362 (482)
Q Consensus 303 ~~~~~~d~~-~~~W~~~~~~--~~-~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~y--d~~~~~W 362 (482)
+.++.||.. +.+...+... +. ...-.+++.. ++ .+|+.+..+ +.+.+| |+.+++.
T Consensus 167 ~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~-----~~v~v~~~~~~~g~~ 229 (365)
T 1jof_A 167 NKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG-----NRICEYVIDPATHMP 229 (365)
T ss_dssp TEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTT-----TEEEEEEECTTTCCE
T ss_pred CEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCC-----CeEEEEEEeCCCCcE
Confidence 468888887 6666443322 21 1111223332 45 577765322 345554 5556654
No 375
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=24.80 E-value=2.1e+02 Score=26.47 Aligned_cols=70 Identities=13% Similarity=0.071 Sum_probs=41.9
Q ss_pred CCEEEEEecCC---CC-CCCCeEEEEeCCCCceeecCCCCCCcccceeEE-EECC--EEEEEeccCCCcccCeEEEEeCC
Q psy11333 334 NDLLYAVGGHD---GQ-SYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVA-VLDG--FLYAVGGQDGVQCLNHVERYDPK 406 (482)
Q Consensus 334 ~~~iyv~GG~~---~~-~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~-~~~~--~lyv~GG~~~~~~~~~~~~yd~~ 406 (482)
++.+|+.-+.. .+ ..-+.|+++|+.+.+-..- .+.+..-.+++ ..++ .+|+..+. .+++.+||..
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~---i~vg~~~~~lavs~D~~~~ly~tn~~-----~~~VsViD~~ 362 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAK---FEMGHEIDSINVSQDEKPLLYALSTG-----DKTLYIHDAE 362 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEE---EEEEEEECEEEECSSSSCEEEEEETT-----TTEEEEEETT
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEE---EECCCCcceEEECCCCCeEEEEEcCC-----CCeEEEEECC
Confidence 67899974321 11 1246899999999886533 22222222333 3455 47776542 3578999999
Q ss_pred CCcee
Q psy11333 407 ENKWS 411 (482)
Q Consensus 407 ~~~W~ 411 (482)
+.+-.
T Consensus 363 t~k~~ 367 (386)
T 3sjl_D 363 SGEEL 367 (386)
T ss_dssp TCCEE
T ss_pred CCcEE
Confidence 87643
No 376
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=24.50 E-value=4e+02 Score=24.25 Aligned_cols=151 Identities=11% Similarity=-0.025 Sum_probs=0.0
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCe-eeccCCCCCCCceeEEEE--CCEEEEEecC-------CCCCCCCeEEEEe
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDW-KIVAPMSKRRCGVGVAVL--NDLLYAVGGH-------DGQSYLNSIERYD 356 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W-~~~~~~~~~~~~~~~~~~--~~~iyv~GG~-------~~~~~~~~~~~yd 356 (482)
++.+++-|+.+ ..+..+|+.+.+. ..+..-.........+.+ ++.+.+.+.. .......++..||
T Consensus 192 ~~~~LaSgS~D-----~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd 266 (356)
T 2w18_A 192 MQEALLGTTIM-----NNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVIN 266 (356)
T ss_dssp STTEEEEEETT-----SEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEE
T ss_pred CCceEEEecCC-----CcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEE
Q ss_pred CCCCceeecCCCCCCcccc---eeEEEECCEEEEEeccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCEE
Q psy11333 357 PQTNQWSCDVAPTTSCRTS---VGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGFL 432 (482)
Q Consensus 357 ~~~~~W~~~~~~~~~~r~~---~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i 432 (482)
+.+.+-... -....|..+ +.....++.+.+.|+.++ ++..||+.+.+-...-.-........++.. +|+.
T Consensus 267 ~~tgk~l~v-~~~~~p~Gh~~~~lsg~~sg~~lASgS~Dg-----TIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~ 340 (356)
T 2w18_A 267 PKTTLSVGV-MLYCLPPGQAGRFLEGDVKDHCAAAILTSG-----TIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSH 340 (356)
T ss_dssp TTTTEEEEE-EEECCCTTCCCCEEEEEEETTEEEEEETTS-----CEEEEETTTCSEEEEECCC--CCCCEEEECSSSSE
T ss_pred CCCCEEEEE-EEeeccCCCcceeEccccCCCEEEEEcCCC-----cEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCE
Q ss_pred EEEcCCCCCCCCCeEEEEeCC
Q psy11333 433 YAIGGSDGQSPLNTVERFDPK 453 (482)
Q Consensus 433 ~v~GG~~~~~~~~~~~~y~~~ 453 (482)
.+.|+.+ ++|.+||..
T Consensus 341 LaSGS~D-----~TIklWd~~ 356 (356)
T 2w18_A 341 LLAGQKD-----GNIFVYHYS 356 (356)
T ss_dssp EEEECTT-----SCEEEEEEC
T ss_pred EEEEECC-----CcEEEecCC
No 377
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=24.24 E-value=5.3e+02 Score=25.56 Aligned_cols=169 Identities=16% Similarity=0.107 Sum_probs=0.0
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCCCeeeccCCCCCCCceeEEE-ECCEEEEEecCCCCCCCCeEEEEeCCCCceeec
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSSDWKIVAPMSKRRCGVGVAV-LNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCD 365 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 365 (482)
++.||+... ....++++++.....+.+.......-..-++- .++.||+.-... +.+++.++....=+.+
T Consensus 48 ~~~lywtD~-----~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~-----~~I~v~~~dG~~~~~l 117 (628)
T 4a0p_A 48 DNRIYWTDI-----SLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGT-----NRIEVSKLDGQHRQVL 117 (628)
T ss_dssp TTEEEEEET-----TTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTT-----TEEEEEETTSTTCEEE
T ss_pred CCEEEEEEC-----CCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCC-----CEEEEEecCCCcEEEE
Q ss_pred C-CCCCCcccceeEEEE--CCEEEEEe-ccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEECCEEEEEcCCCCC
Q psy11333 366 V-APTTSCRTSVGVAVL--DGFLYAVG-GQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVLGGFLYAIGGSDGQ 441 (482)
Q Consensus 366 ~-~~~~~~r~~~~~~~~--~~~lyv~G-G~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~ 441 (482)
. ..+..|+ ++++. +|.||+.- |. ...+++.++....-+.+..-...-.+-+.-..+++||+.-..+
T Consensus 118 ~~~~l~~P~---~iavdp~~G~lY~tD~g~-----~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~-- 187 (628)
T 4a0p_A 118 VWKDLDSPR---ALALDPAEGFMYWTEWGG-----KPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDT-- 187 (628)
T ss_dssp ECSSCCCEE---EEEEETTTTEEEEEECSS-----SCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTT--
T ss_pred EeCCCCCcc---cEEEccCCCeEEEeCCCC-----CCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCC--
Q ss_pred CCCCeEEEEeCCCCceeecCCCCcCCCceeEEEEcCCCC
Q psy11333 442 SPLNTVERFDPKLNRWTAMAPMSTRRKHLGCAVFVGDNG 480 (482)
Q Consensus 442 ~~~~~~~~y~~~~~~W~~~~~~~~~r~~~~~~~~~~~~~ 480 (482)
+.|+++|.....=+.+.. ....-.++++.+++++
T Consensus 188 ---~~I~~~d~dG~~~~v~~~--~l~~P~glav~~~~ly 221 (628)
T 4a0p_A 188 ---NLIESSNMLGLNREVIAD--DLPHPFGLTQYQDYIY 221 (628)
T ss_dssp ---TEEEEEETTSCSCEEEEE--CCSCEEEEEEETTEEE
T ss_pred ---CEEEEEcCCCCceEEeec--cCCCceEEEEECCEEE
No 378
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=22.96 E-value=1.7e+02 Score=21.28 Aligned_cols=39 Identities=10% Similarity=0.072 Sum_probs=29.7
Q ss_pred HHHHHHHhc---cCCCCCHHHHHHHHhhCCCHHHHHHHHHHH
Q psy11333 125 DICCEFLKR---QLDPSNCLGIRAFADTHSCRDLLRIADKFT 163 (482)
Q Consensus 125 ~~~~~~i~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~~i 163 (482)
....+|+-. .+..+++..++..|..+..+.|.+.|.+++
T Consensus 78 ~~ll~~~Yt~~~~~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 78 TALMDFAYTATLTVSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp HHHHHHHHHSCCCCCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCccCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 334445543 234568899999999999999999999876
No 379
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=22.80 E-value=4.7e+02 Score=24.38 Aligned_cols=104 Identities=16% Similarity=0.216 Sum_probs=56.2
Q ss_pred CEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEE-ECCEEEEEeccCCCcccCeEEEEeCCCCcee--
Q psy11333 335 DLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAV-LDGFLYAVGGQDGVQCLNHVERYDPKENKWS-- 411 (482)
Q Consensus 335 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~-- 411 (482)
+.||+.-.. ..+.++|+.+++.+.+...... ..++++ .+|.||+..-.+. .....+..++.. ..|.
T Consensus 153 g~Lyv~D~~------~~I~~id~~~g~v~~~~~~~~~---P~giavd~dG~lyVad~~~~-~~~~gv~~~~~~-~~~~~~ 221 (433)
T 4hw6_A 153 DDLYWVGQR------DAFRHVDFVNQYVDIKTTNIGQ---CADVNFTLNGDMVVVDDQSS-DTNTGIYLFTRA-SGFTER 221 (433)
T ss_dssp CEEEEECBT------SCEEEEETTTTEEEEECCCCSC---EEEEEECTTCCEEEEECCSC-TTSEEEEEECGG-GTTCCE
T ss_pred CEEEEEeCC------CCEEEEECCCCEEEEeecCCCC---ccEEEECCCCCEEEEcCCCC-cccceEEEEECC-CCeecc
Confidence 789987532 5799999999988777222211 223333 3566998864221 111235555543 2232
Q ss_pred -ecCCCCCCccceEEEEE--CCEEEEEcCCCCCCCCCeEEEEeCCCCce
Q psy11333 412 -RVAPMTTRRLGVAVAVL--GGFLYAIGGSDGQSPLNTVERFDPKLNRW 457 (482)
Q Consensus 412 -~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~y~~~~~~W 457 (482)
.++.+..| ..+++- ++.||+.-..+ ..+++||+.+.+.
T Consensus 222 ~~~~~~~~P---~giavd~~~G~lyv~d~~~-----~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 222 LSLCNARGA---KTCAVHPQNGKIYYTRYHH-----AMISSYDPATGTL 262 (433)
T ss_dssp EEEEECSSB---CCCEECTTTCCEEECBTTC-----SEEEEECTTTCCE
T ss_pred ccccccCCC---CEEEEeCCCCeEEEEECCC-----CEEEEEECCCCeE
Confidence 22222222 222332 57888775432 4688888875544
No 380
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=22.20 E-value=1.6e+02 Score=26.67 Aligned_cols=64 Identities=11% Similarity=0.128 Sum_probs=34.3
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCC--CeeeccC----CCCCCCceeEEEECCEEEEEec-CCCCCCCCeEEEEeCCC
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSS--DWKIVAP----MSKRRCGVGVAVLNDLLYAVGG-HDGQSYLNSIERYDPQT 359 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~--~W~~~~~----~~~~~~~~~~~~~~~~iyv~GG-~~~~~~~~~~~~yd~~~ 359 (482)
++.+|+... + ..++.+|..+. .|+.-.. +...+.... ..++.+|++.. .+ ..++.+|..+
T Consensus 10 ~~~V~v~t~-d-----G~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~--~~~~~~~vv~p~~d-----G~l~a~~~~~ 76 (339)
T 2be1_A 10 SDILIAADV-E-----GGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSR--LETYETLIIEPFGD-----GNIYYFNAHQ 76 (339)
T ss_dssp EEEEEEEET-T-----SCEEEEETTTTEEEEEECGGGSCCSEECCCSCT--TTSSEEEEECCSTT-----TEEEEEETTT
T ss_pred CCEEEEEeC-C-----CeEEEEECCCCcEEEEecCCccCCcEEecCCcc--ccCCcEEEEEECCC-----CEEEEEECCC
Confidence 455555432 1 35788888776 4865332 111111111 13557777653 22 3688899887
Q ss_pred Ccee
Q psy11333 360 NQWS 363 (482)
Q Consensus 360 ~~W~ 363 (482)
+.|+
T Consensus 77 G~~~ 80 (339)
T 2be1_A 77 GLQK 80 (339)
T ss_dssp EEEE
T ss_pred CcEE
Confidence 7665
No 381
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=21.86 E-value=32 Score=26.35 Aligned_cols=41 Identities=15% Similarity=0.151 Sum_probs=32.2
Q ss_pred HHHHHhc---cCCCCCHHHHHHHHhhCCCHHHHHHHHHHHHHhH
Q psy11333 127 CCEFLKR---QLDPSNCLGIRAFADTHSCRDLLRIADKFTQHNF 167 (482)
Q Consensus 127 ~~~~i~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~~i~~~~ 167 (482)
..+|+-. .+..+++..++..|..+..+.|.+.|.+|+..++
T Consensus 90 lL~~~Ytg~~~i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l 133 (138)
T 2z8h_A 90 LIQFAYTAKLILSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKF 133 (138)
T ss_dssp HHHHHHHSCCCCCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCC
T ss_pred HHHHhcCCCcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 4445543 3456789999999999999999999999887553
No 382
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=21.41 E-value=4.2e+02 Score=23.36 Aligned_cols=169 Identities=12% Similarity=0.044 Sum_probs=0.0
Q ss_pred CcEEEEeccccCCCCCceeEEEeCCCC---CeeeccCCCCCCCceeEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCc
Q psy11333 287 GEVLFAVGGWCSGDAISSVERYDPQSS---DWKIVAPMSKRRCGVGVAVL--NDLLYAVGGHDGQSYLNSIERYDPQTNQ 361 (482)
Q Consensus 287 ~~~l~~~GG~~~~~~~~~~~~~d~~~~---~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 361 (482)
++.||+. ......++++++... ++.....+..|. +.++- ++.||+.-... +.++++++....
T Consensus 46 ~~~lyw~-----D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~---glavd~~~g~ly~~d~~~-----~~I~~~~~dG~~ 112 (318)
T 3sov_A 46 HGLIYWS-----DVSEEAIKRTEFNKTESVQNVVVSGLLSPD---GLACDWLGEKLYWTDSET-----NRIEVSNLDGSL 112 (318)
T ss_dssp GTEEEEE-----ETTTTEEEEEETTSSSCCCEEEEECCSCCC---EEEEETTTTEEEEEETTT-----TEEEEEETTSCS
T ss_pred CCEEEEE-----ECCCCcEEEEEccCCCceEEEEcCCCCCcc---EEEEEcCCCeEEEEECCC-----CEEEEEECCCCc
Q ss_pred eeecCCCCCCcccceeEEE-ECCEEEEEe-ccCCCcccCeEEEEeCCCCceeecCCCCCCccceEEEEE-CCEEEEEcCC
Q psy11333 362 WSCDVAPTTSCRTSVGVAV-LDGFLYAVG-GQDGVQCLNHVERYDPKENKWSRVAPMTTRRLGVAVAVL-GGFLYAIGGS 438 (482)
Q Consensus 362 W~~~~~~~~~~r~~~~~~~-~~~~lyv~G-G~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~ 438 (482)
-+.+ ......+...-++- .+|.||+.- |. ...++++++....-+.+..-....-..-++-. +++||+.-..
T Consensus 113 ~~~l-~~~~~~~P~giavdp~~g~ly~td~~~-----~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~ 186 (318)
T 3sov_A 113 RKVL-FWQELDQPRAIALDPSSGFMYWTDWGE-----VPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAK 186 (318)
T ss_dssp CEEE-ECSSCSSEEEEEEEGGGTEEEEEECSS-----SCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred EEEE-EeCCCCCccEEEEeCCCCEEEEEecCC-----CCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECC
Q ss_pred CCCCCCCeEEEEeCCCCceeecCCCCcCCCceeEEEEcCCCC
Q psy11333 439 DGQSPLNTVERFDPKLNRWTAMAPMSTRRKHLGCAVFVGDNG 480 (482)
Q Consensus 439 ~~~~~~~~~~~y~~~~~~W~~~~~~~~~r~~~~~~~~~~~~~ 480 (482)
+ ..|+++|.....-+.+.. .....-.++++.++.++
T Consensus 187 ~-----~~I~~~d~dG~~~~~~~~-~~~~~P~glav~~~~ly 222 (318)
T 3sov_A 187 L-----NFIHKSNLDGTNRQAVVK-GSLPHPFALTLFEDILY 222 (318)
T ss_dssp T-----TEEEEEETTSCSCEEEEC-SCCSCEEEEEEETTEEE
T ss_pred C-----CEEEEEcCCCCceEEEec-CCCCCceEEEEeCCEEE
No 383
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=21.01 E-value=1.7e+02 Score=25.53 Aligned_cols=17 Identities=18% Similarity=0.192 Sum_probs=11.1
Q ss_pred ceeEEEECCEEEEEecC
Q psy11333 327 GVGVAVLNDLLYAVGGH 343 (482)
Q Consensus 327 ~~~~~~~~~~iyv~GG~ 343 (482)
.|+++.-++.+|.+|-.
T Consensus 34 ~h~~~l~~G~v~~wG~n 50 (282)
T 3qhy_B 34 FHGLALKGGKVLGWGAN 50 (282)
T ss_dssp SEEEEEETTEEEEEECC
T ss_pred CeEEEEECCEEEEEeCC
Confidence 34444448889988843
No 384
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=20.85 E-value=1.1e+02 Score=23.45 Aligned_cols=39 Identities=15% Similarity=0.166 Sum_probs=30.0
Q ss_pred HHHHHHHhc---cCCCCCHHHHHHHHhhCCCHHHHHHHHHHH
Q psy11333 125 DICCEFLKR---QLDPSNCLGIRAFADTHSCRDLLRIADKFT 163 (482)
Q Consensus 125 ~~~~~~i~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~~i 163 (482)
....+|+-. .++.+++..++..|..+..+.|.+.|.+|+
T Consensus 102 ~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 102 REILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp HHHHHHHTTSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 344455553 245578999999999999999999998765
No 385
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=20.77 E-value=3.3e+02 Score=24.68 Aligned_cols=64 Identities=17% Similarity=0.171 Sum_probs=35.5
Q ss_pred CCEEEEEecCCCCCCCCeEEEEeCCCCceeecCCCCCCcccceeEEEE-CC-EEEEEeccCCCcccCeEEEEeCCCCc
Q psy11333 334 NDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVL-DG-FLYAVGGQDGVQCLNHVERYDPKENK 409 (482)
Q Consensus 334 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~yd~~~~~ 409 (482)
++++.+.||.+ .++..||..+..=......... ...+++.. ++ .+++.|+.++ .+..||..+.+
T Consensus 155 d~~~las~s~D-----~tv~~Wd~~~~~~~~~~~~~~~--~v~~v~~~p~~~~~l~~~~~d~-----~v~~wd~~t~~ 220 (393)
T 4gq1_A 155 AEQVIASVGDD-----CTLIIWRLTDEGPILAGYPLSS--PGISVQFRPSNPNQLIVGERNG-----NIRIFDWTLNL 220 (393)
T ss_dssp EEEEEEEEETT-----SEEEEEEEETTEEEEEEEECSS--CEEEEEEETTEEEEEEEEETTS-----EEEEEETTCCC
T ss_pred CCCEEEEEECC-----CeEEEEECCCCceeeeecCCCC--CcEEEEECCCCCceEEecCCCC-----EEEEEECCCCc
Confidence 67888889876 4788999876542211011111 11233333 33 4677776543 56778876554
Done!