BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11336
(194 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P97767|EYA1_MOUSE Eyes absent homolog 1 OS=Mus musculus GN=Eya1 PE=1 SV=3
Length = 591
Score = 217 bits (553), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 104/186 (55%), Positives = 130/186 (69%), Gaps = 28/186 (15%)
Query: 5 LEVGGSTSSRGRGRKSSASASNASSAGTPTPIIPNPCPSPGSPAGDSRILDRVFIWDLDE 64
L G SRGRGR+++ NP P P S L+RVFIWDLDE
Sbjct: 294 LRRGSDGKSRGRGRRNN-----------------NPSPPPDSD------LERVFIWDLDE 330
Query: 65 TIIIFHSLLTGSYATKHGKCPQTVIQLGYKMEEMIFGVADNHFFFNEVEDCDQVHIDDIS 124
TII+FHSLLTGSYA ++G+ P T + LG +MEEMIF +AD H FFN++E+CDQVHIDD+S
Sbjct: 331 TIIVFHSLLTGSYANRYGRDPPTSVSLGLRMEEMIFNLADTHLFFNDLEECDQVHIDDVS 390
Query: 125 TDDNGQDLNGYNFSADGFRASVLNVPSGPPGLCVASGVRGGVDWMRKLAFRYRKIKDIYN 184
+DDNGQDL+ YNF DGF A+ + LC+A+GVRGGVDWMRKLAFRYR++K+IYN
Sbjct: 391 SDDNGQDLSTYNFGTDGFPAAATSA-----NLCLATGVRGGVDWMRKLAFRYRRVKEIYN 445
Query: 185 NYRNSV 190
Y+N+V
Sbjct: 446 TYKNNV 451
>sp|Q99502|EYA1_HUMAN Eyes absent homolog 1 OS=Homo sapiens GN=EYA1 PE=1 SV=2
Length = 592
Score = 217 bits (552), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 104/186 (55%), Positives = 130/186 (69%), Gaps = 28/186 (15%)
Query: 5 LEVGGSTSSRGRGRKSSASASNASSAGTPTPIIPNPCPSPGSPAGDSRILDRVFIWDLDE 64
L G SRGRGR+++ NP P P S L+RVFIWDLDE
Sbjct: 295 LRRGSDGKSRGRGRRNN-----------------NPSPPPDSD------LERVFIWDLDE 331
Query: 65 TIIIFHSLLTGSYATKHGKCPQTVIQLGYKMEEMIFGVADNHFFFNEVEDCDQVHIDDIS 124
TII+FHSLLTGSYA ++G+ P T + LG +MEEMIF +AD H FFN++E+CDQVHIDD+S
Sbjct: 332 TIIVFHSLLTGSYANRYGRDPPTSVSLGLRMEEMIFNLADTHLFFNDLEECDQVHIDDVS 391
Query: 125 TDDNGQDLNGYNFSADGFRASVLNVPSGPPGLCVASGVRGGVDWMRKLAFRYRKIKDIYN 184
+DDNGQDL+ YNF DGF A+ + LC+A+GVRGGVDWMRKLAFRYR++K+IYN
Sbjct: 392 SDDNGQDLSTYNFGTDGFPAAATSA-----NLCLATGVRGGVDWMRKLAFRYRRVKEIYN 446
Query: 185 NYRNSV 190
Y+N+V
Sbjct: 447 TYKNNV 452
>sp|Q9Z191|EYA4_MOUSE Eyes absent homolog 4 OS=Mus musculus GN=Eya4 PE=2 SV=2
Length = 616
Score = 214 bits (544), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 127/180 (70%), Gaps = 29/180 (16%)
Query: 11 TSSRGRGRKSSASASNASSAGTPTPIIPNPCPSPGSPAGDSRILDRVFIWDLDETIIIFH 70
+ SRGRGRK+ NP P P S L+RVF+WDLDETII+FH
Sbjct: 326 SKSRGRGRKN------------------NPSPPPDSD------LERVFVWDLDETIIVFH 361
Query: 71 SLLTGSYATKHGKCPQTVIQLGYKMEEMIFGVADNHFFFNEVEDCDQVHIDDISTDDNGQ 130
SLLTGSYA K+GK P + LG +MEEMIF +AD H FFN++E+CDQVHIDD+S+DDNGQ
Sbjct: 362 SLLTGSYAQKYGKDPPMAVTLGLRMEEMIFNLADTHLFFNDLEECDQVHIDDVSSDDNGQ 421
Query: 131 DLNGYNFSADGFRASVLNVPSGPPGLCVASGVRGGVDWMRKLAFRYRKIKDIYNNYRNSV 190
DL+ Y+F+ DGF A+ + LC+ +GVRGGVDWMRKLAFRYR++K++YN Y+N+V
Sbjct: 422 DLSTYSFATDGFHAAASSA-----NLCLPTGVRGGVDWMRKLAFRYRRVKELYNTYKNNV 476
>sp|O95677|EYA4_HUMAN Eyes absent homolog 4 OS=Homo sapiens GN=EYA4 PE=1 SV=2
Length = 639
Score = 214 bits (544), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 127/180 (70%), Gaps = 29/180 (16%)
Query: 11 TSSRGRGRKSSASASNASSAGTPTPIIPNPCPSPGSPAGDSRILDRVFIWDLDETIIIFH 70
+ SRGRGRK+ NP P P S L+RVF+WDLDETII+FH
Sbjct: 349 SKSRGRGRKN------------------NPSPPPDSD------LERVFVWDLDETIIVFH 384
Query: 71 SLLTGSYATKHGKCPQTVIQLGYKMEEMIFGVADNHFFFNEVEDCDQVHIDDISTDDNGQ 130
SLLTGSYA K+GK P + LG +MEEMIF +AD H FFN++E+CDQVHIDD+S+DDNGQ
Sbjct: 385 SLLTGSYAQKYGKDPPMAVTLGLRMEEMIFNLADTHLFFNDLEECDQVHIDDVSSDDNGQ 444
Query: 131 DLNGYNFSADGFRASVLNVPSGPPGLCVASGVRGGVDWMRKLAFRYRKIKDIYNNYRNSV 190
DL+ Y+F+ DGF A+ + LC+ +GVRGGVDWMRKLAFRYR++K++YN Y+N+V
Sbjct: 445 DLSTYSFATDGFHAAASSA-----NLCLPTGVRGGVDWMRKLAFRYRRVKELYNTYKNNV 499
>sp|Q05201|EYA_DROME Developmental protein eyes absent OS=Drosophila melanogaster GN=eya
PE=1 SV=1
Length = 766
Score = 213 bits (541), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 103/192 (53%), Positives = 135/192 (70%), Gaps = 15/192 (7%)
Query: 12 SSRGRGRKSSASASNASSAGTPTPII----------PNPCPSPGSPAGDSRIL---DRVF 58
SS G ++ S A+S TPT P+P S S G+S + +RVF
Sbjct: 437 SSGGSSVGTAGSGGVATSKTTPTGKTGRARGRRHQQPSPTRSTASDTGNSEAVKPPERVF 496
Query: 59 IWDLDETIIIFHSLLTGSYATKHGKCPQTVIQLGYKMEEMIFGVADNHFFFNEVEDCDQV 118
+WDLDET+IIFH+LL+GSYA ++ K +++ + ++MEEM+F +AD HFFFNE+E+CDQV
Sbjct: 497 VWDLDETLIIFHTLLSGSYANRYTKDHSSLMTIAFRMEEMVFNMADTHFFFNEIEECDQV 556
Query: 119 HIDDISTDDNGQDLNGYNFSADGFRASVLNVPSGPPGLCVASGVRGGVDWMRKLAFRYRK 178
HIDD+S+DDNGQDL+ YNF+ DGF + P PP LC+ +GVRGGVDWMRKLAFRYRK
Sbjct: 557 HIDDVSSDDNGQDLSAYNFATDGFHTNT--PPGAPPNLCLPTGVRGGVDWMRKLAFRYRK 614
Query: 179 IKDIYNNYRNSV 190
IKDIYN+YR +V
Sbjct: 615 IKDIYNSYRGNV 626
>sp|O00167|EYA2_HUMAN Eyes absent homolog 2 OS=Homo sapiens GN=EYA2 PE=1 SV=2
Length = 538
Score = 207 bits (527), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 94/147 (63%), Positives = 121/147 (82%), Gaps = 10/147 (6%)
Query: 46 SPAGDSRILDRVFIWDLDETIIIFHSLLTGSYATKHGKCPQTVIQLGYKMEEMIFGVADN 105
SPAGD+ I +RVF+WDLDETIIIFHSLLTG++A+++GK T +++G MEEMIF +AD
Sbjct: 260 SPAGDNEI-ERVFVWDLDETIIIFHSLLTGTFASRYGKDTTTSVRIGLMMEEMIFNLADT 318
Query: 106 HFFFNEVEDCDQVHIDDISTDDNGQDLNGYNFSADGFRASVLNVPSGPPG--LCVASGVR 163
H FFN++EDCDQ+H+DD+S+DDNGQDL+ YNFSADGF +S PG LC+ SGV
Sbjct: 319 HLFFNDLEDCDQIHVDDVSSDDNGQDLSTYNFSADGFHSSA-------PGANLCLGSGVH 371
Query: 164 GGVDWMRKLAFRYRKIKDIYNNYRNSV 190
GGVDWMRKLAFRYR++K++YN Y+N+V
Sbjct: 372 GGVDWMRKLAFRYRRVKEMYNTYKNNV 398
>sp|O08575|EYA2_MOUSE Eyes absent homolog 2 OS=Mus musculus GN=Eya2 PE=1 SV=1
Length = 532
Score = 206 bits (525), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 92/147 (62%), Positives = 120/147 (81%), Gaps = 10/147 (6%)
Query: 46 SPAGDSRILDRVFIWDLDETIIIFHSLLTGSYATKHGKCPQTVIQLGYKMEEMIFGVADN 105
SPAGD+ I +RVF+WDLDETIIIFHSLLTG++A+++GK T +++G MEEMIF +AD
Sbjct: 254 SPAGDNEI-ERVFVWDLDETIIIFHSLLTGTFASRYGKDTTTSVRIGLMMEEMIFNLADT 312
Query: 106 HFFFNEVEDCDQVHIDDISTDDNGQDLNGYNFSADGFRASVLNVPSGPPG--LCVASGVR 163
H FFN++EDCDQ+H+DD+S+DDNGQDL+ YNFS DGF ++ PG LC+ +GV
Sbjct: 313 HLFFNDLEDCDQIHVDDVSSDDNGQDLSTYNFSTDGFHSTA-------PGASLCLGTGVH 365
Query: 164 GGVDWMRKLAFRYRKIKDIYNNYRNSV 190
GGVDWMRKLAFRYR++K++YN YRN+V
Sbjct: 366 GGVDWMRKLAFRYRRVKEMYNTYRNNV 392
>sp|Q58DB6|EYA2_BOVIN Eyes absent homolog 2 OS=Bos taurus GN=EYA2 PE=2 SV=1
Length = 537
Score = 206 bits (524), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 93/147 (63%), Positives = 120/147 (81%), Gaps = 10/147 (6%)
Query: 46 SPAGDSRILDRVFIWDLDETIIIFHSLLTGSYATKHGKCPQTVIQLGYKMEEMIFGVADN 105
SPAGD+ I +RVF+WDLDETIIIFHSLLTG++A+++GK +++G MEEMIF +AD
Sbjct: 259 SPAGDNEI-ERVFVWDLDETIIIFHSLLTGTFASRYGKDTTASVRIGLMMEEMIFNLADT 317
Query: 106 HFFFNEVEDCDQVHIDDISTDDNGQDLNGYNFSADGFRASVLNVPSGPPG--LCVASGVR 163
H FFN++EDCDQ+H+DD+S+DDNGQDL+ YNFSADGF +S PG LC+ SGV
Sbjct: 318 HLFFNDLEDCDQIHVDDVSSDDNGQDLSTYNFSADGFHSSA-------PGANLCLGSGVH 370
Query: 164 GGVDWMRKLAFRYRKIKDIYNNYRNSV 190
GGVDWMRKLAFRYR++K++YN Y+N+V
Sbjct: 371 GGVDWMRKLAFRYRRVKEMYNTYKNNV 397
>sp|Q99504|EYA3_HUMAN Eyes absent homolog 3 OS=Homo sapiens GN=EYA3 PE=1 SV=3
Length = 573
Score = 175 bits (443), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/137 (61%), Positives = 108/137 (78%), Gaps = 5/137 (3%)
Query: 54 LDRVFIWDLDETIIIFHSLLTGSYATKHGKCPQTVIQLGYKMEEMIFGVADNHFFFNEVE 113
L+RVF+WDLDETIIIFHSLLTGSYA K+GK P VI G MEEMIF VAD H FFN++E
Sbjct: 302 LERVFLWDLDETIIIFHSLLTGSYAQKYGKDPTVVIGSGLTMEEMIFEVADTHLFFNDLE 361
Query: 114 DCDQVHIDDISTDDNGQDLNGYNFSADGFRASVLNVPSGPPGLCVASGVRGGVDWMRKLA 173
+CDQVH++D+++DDNGQDL+ Y+FS DGF S + + GV+GGVDWMRKLA
Sbjct: 362 ECDQVHVEDVASDDNGQDLSNYSFSTDGFSGSGGSG-----SHGSSVGVQGGVDWMRKLA 416
Query: 174 FRYRKIKDIYNNYRNSV 190
FRYRK+++IY+ ++++V
Sbjct: 417 FRYRKVREIYDKHKSNV 433
>sp|P97480|EYA3_MOUSE Eyes absent homolog 3 OS=Mus musculus GN=Eya3 PE=1 SV=2
Length = 510
Score = 174 bits (441), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/146 (59%), Positives = 112/146 (76%), Gaps = 6/146 (4%)
Query: 45 GSPAGDSRILDRVFIWDLDETIIIFHSLLTGSYATKHGKCPQTVIQLGYKMEEMIFGVAD 104
S + DS L+RVF+WDLDETIIIFHSLLTGSYA K+GK P VI G MEEMIF VAD
Sbjct: 231 ASSSQDSE-LERVFLWDLDETIIIFHSLLTGSYAQKYGKDPTVVIGSGLTMEEMIFEVAD 289
Query: 105 NHFFFNEVEDCDQVHIDDISTDDNGQDLNGYNFSADGFRASVLNVPSGPPGLCVASGVRG 164
H FFN++E+CDQVH++D+++DDNGQDL+ Y+FS DGF S + + GV+G
Sbjct: 290 THLFFNDLEECDQVHVEDVASDDNGQDLSNYSFSTDGFSGSGGSG-----SHGSSVGVQG 344
Query: 165 GVDWMRKLAFRYRKIKDIYNNYRNSV 190
GVDWMRKLAFRYRK+++IY+ ++++V
Sbjct: 345 GVDWMRKLAFRYRKVREIYDKHKSNV 370
>sp|Q9YHA0|EYA1_CHICK Eyes absent homolog 1 (Fragment) OS=Gallus gallus GN=EYA1 PE=3 SV=1
Length = 119
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 20/21 (95%)
Query: 170 RKLAFRYRKIKDIYNNYRNSV 190
RKLAFRYR++K+IYN Y+N+V
Sbjct: 1 RKLAFRYRRVKEIYNTYKNNV 21
>sp|Q9YH98|EYA4_CHICK Eyes absent homolog 4 (Fragment) OS=Gallus gallus GN=EYA4 PE=3 SV=1
Length = 119
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 20/21 (95%)
Query: 170 RKLAFRYRKIKDIYNNYRNSV 190
RKLAFRYR++K++YN Y+N++
Sbjct: 1 RKLAFRYRRVKELYNTYKNNI 21
>sp|Q9YHA1|EYA4_TAKRU Eyes absent homolog 4 (Fragment) OS=Takifugu rubripes GN=eya4 PE=3
SV=1
Length = 119
Score = 37.4 bits (85), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 19/21 (90%)
Query: 170 RKLAFRYRKIKDIYNNYRNSV 190
RKLAFRYR++K++Y Y+N+V
Sbjct: 1 RKLAFRYRRVKELYTTYKNNV 21
>sp|Q9LMR4|FBK4_ARATH Putative F-box/kelch-repeat protein At1g15680 OS=Arabidopsis
thaliana GN=At1g15680 PE=4 SV=1
Length = 410
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 54 LDRVFIWDLDETIIIFHSLLTGSYATKHGKCPQTVIQLGYK----MEEMIFGVADNHF 107
+D + W+++ I+ +S LTG++ K +CP ++ L YK +++M+ + D H+
Sbjct: 180 MDIDYRWEVESLILEIYSSLTGTWTRKKVRCPSLIVSLSYKRCLSLKKMLHWL-DTHY 236
>sp|Q9YH99|EYA3_CHICK Eyes absent homolog 3 (Fragment) OS=Gallus gallus GN=EYA3 PE=2 SV=1
Length = 119
Score = 35.0 bits (79), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 19/21 (90%)
Query: 170 RKLAFRYRKIKDIYNNYRNSV 190
RKLAFRYR++++IY+ Y+ +V
Sbjct: 1 RKLAFRYRRVREIYDKYKTNV 21
>sp|Q9JJN2|ZFHX4_MOUSE Zinc finger homeobox protein 4 OS=Mus musculus GN=Zfhx4 PE=1 SV=1
Length = 3550
Score = 33.1 bits (74), Expect = 1.2, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 19 KSSASASNASSAGTPTPIIPNPCPSP 44
KS+A+ +S +GT TP+IP+P P P
Sbjct: 2314 KSTATLVASSGSGTSTPLIPSPKPEP 2339
>sp|Q6BSD9|LOT5_DEBHA Protein LOT5 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767
/ JCM 1990 / NBRC 0083 / IGC 2968) GN=LOT5 PE=3 SV=1
Length = 290
Score = 32.0 bits (71), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 79 TKHGKCPQTVIQLGYKMEEMIFGVADNHFFFNEVEDCDQVHIDDISTDDNGQDLNGY--- 135
TK P++++ + E M V+D H +N + C H D S ++NG + NG+
Sbjct: 145 TKEKDIPESMVNRLF--ESM---VSDIHGLYNGLSTCSAFHYDSDSDEENGDNTNGFYGM 199
Query: 136 NFSADGFRASVLNVPS 151
+F A L +PS
Sbjct: 200 DFQDSDTNAPALEIPS 215
>sp|P98197|AT11A_MOUSE Probable phospholipid-transporting ATPase IH OS=Mus musculus
GN=Atp11a PE=2 SV=1
Length = 1187
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 12/88 (13%)
Query: 101 GVADNHFFFNEVEDCDQVHIDDISTDDNGQDLNGYNFSADGFRASVLNVPSGPPGLCVAS 160
G FF + C V + D D G D++G S D S + + S P + +
Sbjct: 464 GREREELFFRAICLCHTVQVKD---DHCGDDVDGPQKSPDA--KSCVYISSSPDEVALVE 518
Query: 161 GVRGGVDWMRKLAFRYRKIKDIYNNYRN 188
GV+ +L F Y ++KD Y N
Sbjct: 519 GVQ-------RLGFTYLRLKDNYMEILN 539
>sp|Q49Z00|REX_STAS1 Redox-sensing transcriptional repressor rex OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=rex PE=3 SV=1
Length = 213
Score = 30.4 bits (67), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 92 GYKMEEMIFGVADNHFFFNEVEDCDQVHIDDISTDDNGQDLNGYNFS 138
GY ++ ++ HFF NE+ + D++ I + + G+ L YNFS
Sbjct: 66 GYNIDSLL------HFFKNEISENDEIKIAIVGVGNLGKALLTYNFS 106
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,039,138
Number of Sequences: 539616
Number of extensions: 3772938
Number of successful extensions: 14184
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 14048
Number of HSP's gapped (non-prelim): 121
length of query: 194
length of database: 191,569,459
effective HSP length: 111
effective length of query: 83
effective length of database: 131,672,083
effective search space: 10928782889
effective search space used: 10928782889
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)