Query psy11337
Match_columns 155
No_of_seqs 73 out of 75
Neff 3.5
Searched_HMMs 29240
Date Fri Aug 16 15:48:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11337.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11337hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3geb_A EYES absent homolog 2; 100.0 2.6E-84 8.9E-89 549.2 12.6 151 5-155 124-274 (274)
2 2pr7_A Haloacid dehalogenase/e 97.8 0.00018 6.3E-09 48.8 8.7 98 45-145 23-125 (137)
3 2pib_A Phosphorylated carbohyd 97.5 0.0017 6E-08 45.9 10.9 92 46-140 90-188 (216)
4 2wm8_A MDP-1, magnesium-depend 97.5 0.0011 3.6E-08 49.0 10.0 100 47-150 75-176 (187)
5 2i6x_A Hydrolase, haloacid deh 97.5 0.00037 1.3E-08 50.5 7.3 100 43-147 92-203 (211)
6 1qq5_A Protein (L-2-haloacid d 97.5 0.0019 6.4E-08 48.8 11.5 103 46-154 99-206 (253)
7 3cnh_A Hydrolase family protei 97.5 0.0011 3.8E-08 47.6 9.8 98 44-145 90-192 (200)
8 2fi1_A Hydrolase, haloacid deh 97.4 0.0016 5.4E-08 46.1 9.3 95 45-144 87-185 (190)
9 3ib6_A Uncharacterized protein 97.3 0.0013 4.6E-08 48.6 8.7 92 45-139 39-143 (189)
10 4dcc_A Putative haloacid dehal 97.3 0.00036 1.2E-08 51.8 5.2 99 43-145 115-224 (229)
11 4ex6_A ALNB; modified rossman 97.2 0.0066 2.3E-07 44.4 11.6 92 45-139 109-205 (237)
12 2w43_A Hypothetical 2-haloalka 97.2 0.0012 4.1E-08 47.9 7.4 86 49-139 82-171 (201)
13 3qnm_A Haloacid dehalogenase-l 97.2 0.003 1E-07 45.7 9.5 92 46-141 113-210 (240)
14 3ed5_A YFNB; APC60080, bacillu 97.2 0.0022 7.7E-08 46.5 8.8 91 45-139 108-205 (238)
15 3sd7_A Putative phosphatase; s 97.2 0.0022 7.7E-08 47.3 8.9 92 45-139 115-212 (240)
16 3m9l_A Hydrolase, haloacid deh 97.2 0.0034 1.2E-07 45.6 9.4 94 45-139 75-172 (205)
17 2hcf_A Hydrolase, haloacid deh 97.1 0.0061 2.1E-07 44.2 10.3 94 45-139 98-198 (234)
18 3dv9_A Beta-phosphoglucomutase 97.1 0.0035 1.2E-07 45.9 9.1 92 46-139 114-210 (247)
19 2b0c_A Putative phosphatase; a 97.1 0.00036 1.2E-08 50.2 3.6 98 44-145 95-199 (206)
20 3qxg_A Inorganic pyrophosphata 97.1 0.0038 1.3E-07 46.3 9.3 92 46-139 115-211 (243)
21 3s6j_A Hydrolase, haloacid deh 97.1 0.0094 3.2E-07 43.0 11.2 91 46-139 97-192 (233)
22 3e58_A Putative beta-phosphogl 97.1 0.0053 1.8E-07 43.3 9.6 92 45-139 94-190 (214)
23 2no4_A (S)-2-haloacid dehaloge 97.0 0.0058 2E-07 45.3 9.8 91 46-139 111-206 (240)
24 3i28_A Epoxide hydrolase 2; ar 97.0 0.0042 1.4E-07 50.0 9.5 95 45-142 105-208 (555)
25 2hdo_A Phosphoglycolate phosph 97.0 0.0037 1.2E-07 45.2 8.3 88 46-138 89-182 (209)
26 3nas_A Beta-PGM, beta-phosphog 97.0 0.011 3.6E-07 43.2 10.9 94 45-143 97-195 (233)
27 2nyv_A Pgpase, PGP, phosphogly 97.0 0.0073 2.5E-07 44.9 9.9 90 46-138 89-183 (222)
28 2ah5_A COG0546: predicted phos 97.0 0.0049 1.7E-07 45.4 8.8 91 45-139 89-182 (210)
29 3kzx_A HAD-superfamily hydrola 96.9 0.0053 1.8E-07 44.9 8.8 94 46-142 109-208 (231)
30 1zrn_A L-2-haloacid dehalogena 96.9 0.0096 3.3E-07 43.5 10.1 91 46-139 101-196 (232)
31 2go7_A Hydrolase, haloacid deh 96.9 0.0087 3E-07 41.8 9.5 90 46-139 91-185 (207)
32 3ddh_A Putative haloacid dehal 96.9 0.0023 8E-08 45.8 6.5 89 46-137 111-201 (234)
33 2fdr_A Conserved hypothetical 96.9 0.0071 2.4E-07 43.7 9.1 83 59-142 102-191 (229)
34 3um9_A Haloacid dehalogenase, 96.9 0.012 4E-07 42.5 10.3 80 58-139 113-197 (230)
35 3kbb_A Phosphorylated carbohyd 96.8 0.0093 3.2E-07 43.4 9.3 86 47-135 91-181 (216)
36 2hoq_A Putative HAD-hydrolase 96.8 0.012 4E-07 43.7 9.6 92 45-139 99-196 (241)
37 3nuq_A Protein SSM1, putative 96.8 0.016 5.4E-07 44.3 10.5 93 45-140 147-252 (282)
38 2gfh_A Haloacid dehalogenase-l 96.8 0.011 3.8E-07 45.7 9.7 90 45-138 126-222 (260)
39 4gib_A Beta-phosphoglucomutase 96.8 0.0063 2.2E-07 46.4 8.2 67 74-142 147-218 (250)
40 3iru_A Phoshonoacetaldehyde hy 96.7 0.016 5.3E-07 43.1 9.9 93 46-140 117-215 (277)
41 2p9j_A Hypothetical protein AQ 96.7 0.011 3.9E-07 42.0 8.8 91 45-143 41-132 (162)
42 3umb_A Dehalogenase-like hydro 96.7 0.013 4.4E-07 42.6 9.2 91 46-139 105-200 (233)
43 3mc1_A Predicted phosphatase, 96.7 0.009 3.1E-07 43.2 8.3 80 58-139 103-187 (226)
44 4eek_A Beta-phosphoglucomutase 96.7 0.0068 2.3E-07 45.4 7.8 92 46-139 116-213 (259)
45 3u26_A PF00702 domain protein; 96.6 0.0097 3.3E-07 43.1 7.9 91 46-140 106-202 (234)
46 2zg6_A Putative uncharacterize 96.6 0.001 3.4E-08 49.4 2.5 88 46-139 101-193 (220)
47 2pke_A Haloacid delahogenase-l 96.6 0.0086 2.9E-07 44.7 7.5 89 46-139 118-208 (251)
48 2wf7_A Beta-PGM, beta-phosphog 96.5 0.015 5.2E-07 41.6 8.4 92 46-142 97-193 (221)
49 1rku_A Homoserine kinase; phos 96.5 0.007 2.4E-07 43.9 6.7 95 45-143 74-176 (206)
50 1te2_A Putative phosphatase; s 96.5 0.029 9.8E-07 40.0 9.6 92 46-140 100-196 (226)
51 3l5k_A Protein GS1, haloacid d 96.5 0.013 4.3E-07 43.7 8.0 91 46-140 118-219 (250)
52 2om6_A Probable phosphoserine 96.5 0.013 4.5E-07 42.1 7.8 92 45-139 104-204 (235)
53 1qyi_A ZR25, hypothetical prot 96.4 0.032 1.1E-06 48.0 11.3 97 42-139 217-343 (384)
54 3umc_A Haloacid dehalogenase; 96.4 0.022 7.5E-07 41.9 8.6 87 46-138 126-217 (254)
55 2hsz_A Novel predicted phospha 96.3 0.034 1.2E-06 41.9 9.6 92 45-139 119-215 (243)
56 1nnl_A L-3-phosphoserine phosp 96.3 0.0096 3.3E-07 43.8 6.3 93 45-140 91-199 (225)
57 3mn1_A Probable YRBI family ph 96.2 0.015 5.1E-07 43.5 7.1 78 57-141 62-140 (189)
58 1yns_A E-1 enzyme; hydrolase f 96.2 0.035 1.2E-06 43.4 9.4 87 47-139 137-232 (261)
59 3k1z_A Haloacid dehalogenase-l 96.1 0.026 8.8E-07 43.1 8.2 92 46-141 112-209 (263)
60 3umg_A Haloacid dehalogenase; 96.1 0.027 9.1E-07 41.0 7.9 86 47-138 123-213 (254)
61 3vay_A HAD-superfamily hydrola 96.1 0.01 3.5E-07 43.0 5.6 85 46-139 111-201 (230)
62 3l8h_A Putative haloacid dehal 96.1 0.041 1.4E-06 39.4 8.7 94 45-141 32-148 (179)
63 2hi0_A Putative phosphoglycola 96.0 0.037 1.3E-06 41.4 8.6 91 45-139 115-210 (240)
64 2r8e_A 3-deoxy-D-manno-octulos 96.0 0.013 4.6E-07 43.5 6.1 79 57-142 69-148 (188)
65 3d6j_A Putative haloacid dehal 96.0 0.044 1.5E-06 38.9 8.5 91 46-139 95-190 (225)
66 3m1y_A Phosphoserine phosphata 96.0 0.018 6.1E-07 41.5 6.5 95 45-143 80-189 (217)
67 4g9b_A Beta-PGM, beta-phosphog 96.0 0.04 1.4E-06 41.9 8.8 90 45-139 100-194 (243)
68 3e8m_A Acylneuraminate cytidyl 96.0 0.014 4.8E-07 41.6 5.9 78 57-141 47-125 (164)
69 1k1e_A Deoxy-D-mannose-octulos 96.0 0.042 1.4E-06 40.4 8.6 88 47-142 42-130 (180)
70 2fpr_A Histidine biosynthesis 95.9 0.021 7E-07 42.3 6.5 100 45-147 47-170 (176)
71 3smv_A S-(-)-azetidine-2-carbo 95.8 0.039 1.3E-06 39.6 7.5 88 46-139 105-201 (240)
72 2qlt_A (DL)-glycerol-3-phospha 95.5 0.17 5.7E-06 38.9 10.6 95 45-142 119-225 (275)
73 2gmw_A D,D-heptose 1,7-bisphos 95.5 0.1 3.5E-06 39.2 9.1 45 95-139 129-177 (211)
74 2p11_A Hypothetical protein; p 95.4 0.048 1.6E-06 40.7 7.0 90 45-140 101-193 (231)
75 3mmz_A Putative HAD family hyd 95.4 0.062 2.1E-06 39.7 7.5 78 57-142 55-133 (176)
76 1swv_A Phosphonoacetaldehyde h 95.3 0.18 6.1E-06 37.6 9.8 90 47-140 110-207 (267)
77 3n1u_A Hydrolase, HAD superfam 95.1 0.07 2.4E-06 40.1 7.0 77 57-140 62-139 (191)
78 3fvv_A Uncharacterized protein 94.9 0.48 1.6E-05 34.6 11.0 101 43-145 95-211 (232)
79 4eze_A Haloacid dehalogenase-l 94.8 0.086 2.9E-06 43.2 7.5 97 45-143 184-293 (317)
80 3p96_A Phosphoserine phosphata 94.7 0.074 2.5E-06 44.3 6.8 95 47-143 263-370 (415)
81 2o2x_A Hypothetical protein; s 94.0 0.2 6.8E-06 37.5 7.3 42 97-138 139-182 (218)
82 2ho4_A Haloacid dehalogenase-l 93.8 0.011 3.6E-07 44.2 -0.1 92 45-139 127-225 (259)
83 3n07_A 3-deoxy-D-manno-octulos 93.6 0.19 6.6E-06 38.4 6.7 80 57-143 68-148 (195)
84 2fea_A 2-hydroxy-3-keto-5-meth 93.4 0.081 2.8E-06 39.8 4.2 85 46-136 83-188 (236)
85 3ij5_A 3-deoxy-D-manno-octulos 93.1 0.16 5.6E-06 39.3 5.6 75 58-141 93-170 (211)
86 3n28_A Phosphoserine phosphata 93.0 0.21 7.3E-06 40.0 6.4 82 58-142 195-291 (335)
87 2g80_A Protein UTR4; YEL038W, 92.8 0.46 1.6E-05 37.6 7.9 79 57-139 137-232 (253)
88 1l7m_A Phosphoserine phosphata 91.4 0.57 1.9E-05 33.0 6.3 41 95-135 142-183 (211)
89 3kd3_A Phosphoserine phosphohy 91.1 1.5 5.1E-05 30.7 8.2 91 45-137 87-189 (219)
90 3ewi_A N-acylneuraminate cytid 90.9 0.33 1.1E-05 36.5 4.9 86 49-143 45-131 (168)
91 2oda_A Hypothetical protein ps 90.3 1.6 5.4E-05 32.8 8.3 87 45-139 41-133 (196)
92 1yv9_A Hydrolase, haloacid deh 89.5 0.41 1.4E-05 36.1 4.4 45 95-139 181-229 (264)
93 2b82_A APHA, class B acid phos 88.3 1.1 3.7E-05 34.2 6.1 87 44-139 92-186 (211)
94 2c4n_A Protein NAGD; nucleotid 88.2 0.7 2.4E-05 33.2 4.7 45 95-139 176-222 (250)
95 2hx1_A Predicted sugar phospha 87.7 0.17 5.8E-06 39.1 1.2 96 40-139 145-254 (284)
96 3a1c_A Probable copper-exporti 87.7 1.9 6.5E-05 33.7 7.3 80 45-134 168-247 (287)
97 3skx_A Copper-exporting P-type 86.2 2.8 9.4E-05 31.2 7.1 82 44-135 148-229 (280)
98 2x4d_A HLHPP, phospholysine ph 85.7 0.95 3.2E-05 33.2 4.3 44 96-139 191-236 (271)
99 3zvl_A Bifunctional polynucleo 84.7 3 0.0001 35.3 7.5 91 43-136 90-216 (416)
100 1vjr_A 4-nitrophenylphosphatas 84.0 1.6 5.4E-05 32.9 4.9 45 95-139 195-241 (271)
101 1rlm_A Phosphatase; HAD family 83.8 4 0.00014 31.3 7.3 49 94-143 189-239 (271)
102 1wr8_A Phosphoglycolate phosph 80.7 1.6 5.4E-05 32.9 3.9 42 94-135 151-193 (231)
103 4dw8_A Haloacid dehalogenase-l 80.1 2.8 9.6E-05 31.7 5.1 52 93-144 194-246 (279)
104 2oyc_A PLP phosphatase, pyrido 79.9 2 6.9E-05 33.6 4.4 43 97-139 217-261 (306)
105 1ltq_A Polynucleotide kinase; 79.0 7.8 0.00027 30.0 7.4 92 43-139 191-298 (301)
106 3nvb_A Uncharacterized protein 78.9 13 0.00043 32.3 9.5 86 46-137 262-356 (387)
107 2rbk_A Putative uncharacterize 78.1 2.9 9.8E-05 31.8 4.6 49 94-142 185-234 (261)
108 3fro_A GLGA glycogen synthase; 77.9 2.4 8.2E-05 33.3 4.2 53 99-152 272-333 (439)
109 3gem_A Short chain dehydrogena 76.9 8 0.00027 30.0 7.0 109 26-146 118-234 (260)
110 3mw8_A Uroporphyrinogen-III sy 76.9 4.4 0.00015 31.0 5.4 40 111-152 201-240 (240)
111 3pdw_A Uncharacterized hydrola 76.8 2.9 0.0001 31.5 4.3 44 96-139 184-229 (266)
112 3epr_A Hydrolase, haloacid deh 76.6 3.4 0.00012 31.4 4.7 43 97-139 184-228 (264)
113 3okp_A GDP-mannose-dependent a 76.6 3.8 0.00013 31.8 4.9 54 98-152 217-275 (394)
114 3oy2_A Glycosyltransferase B73 76.5 3.8 0.00013 32.5 5.0 53 99-152 204-276 (413)
115 1nf2_A Phosphatase; structural 76.2 3.1 0.00011 32.0 4.4 52 93-144 187-239 (268)
116 3qgm_A P-nitrophenyl phosphata 75.9 3.5 0.00012 31.0 4.5 43 97-139 189-233 (268)
117 2q5c_A NTRC family transcripti 75.0 2.2 7.4E-05 33.1 3.2 51 98-150 129-181 (196)
118 2iw1_A Lipopolysaccharide core 74.9 1.9 6.4E-05 33.3 2.8 53 100-152 217-273 (374)
119 3gyg_A NTD biosynthesis operon 74.9 2.9 9.8E-05 32.1 3.9 52 93-144 208-260 (289)
120 1nrw_A Hypothetical protein, h 71.7 4.6 0.00016 31.2 4.4 50 94-143 214-264 (288)
121 3pgv_A Haloacid dehalogenase-l 71.7 10 0.00035 29.1 6.3 52 94-145 207-259 (285)
122 3fzq_A Putative hydrolase; YP_ 69.4 6.7 0.00023 29.2 4.7 52 93-144 197-249 (274)
123 2pju_A Propionate catabolism o 68.9 3.9 0.00013 32.8 3.5 50 97-151 140-189 (225)
124 2xci_A KDO-transferase, 3-deox 68.2 7.1 0.00024 31.9 5.0 52 100-152 215-280 (374)
125 3dnp_A Stress response protein 67.9 5.9 0.0002 30.1 4.2 52 94-145 200-252 (290)
126 2vsy_A XCC0866; transferase, g 67.8 7.3 0.00025 32.6 5.0 54 98-152 394-456 (568)
127 3l7y_A Putative uncharacterize 66.3 14 0.00047 28.8 6.1 50 94-143 226-276 (304)
128 3mpo_A Predicted hydrolase of 64.4 5.7 0.00019 30.0 3.4 51 94-144 195-246 (279)
129 1rkq_A Hypothetical protein YI 63.5 7.7 0.00026 30.0 4.1 42 94-135 196-238 (282)
130 1q92_A 5(3)-deoxyribonucleotid 62.9 0.2 6.9E-06 36.9 -4.8 81 43-139 78-165 (197)
131 3r4c_A Hydrolase, haloacid deh 62.2 9 0.00031 28.7 4.2 52 94-145 192-244 (268)
132 3hh1_A Tetrapyrrole methylase 61.6 24 0.00081 24.6 6.1 44 94-137 62-114 (117)
133 3qhp_A Type 1 capsular polysac 61.6 2.1 7.2E-05 29.6 0.5 41 110-151 31-76 (166)
134 1l6r_A Hypothetical protein TA 61.4 7.5 0.00026 29.5 3.7 43 94-136 151-194 (227)
135 2pq0_A Hypothetical conserved 60.6 13 0.00045 27.8 4.9 51 93-143 180-231 (258)
136 1zjj_A Hypothetical protein PH 58.0 17 0.00057 27.6 5.1 42 97-139 189-231 (263)
137 3gdg_A Probable NADP-dependent 57.7 54 0.0018 24.7 7.9 62 86-147 171-242 (267)
138 2jjm_A Glycosyl transferase, g 56.8 13 0.00043 29.3 4.3 52 99-152 231-287 (394)
139 2i7d_A 5'(3')-deoxyribonucleot 55.9 0.38 1.3E-05 35.1 -4.3 78 44-139 77-163 (193)
140 1wcw_A Uroporphyrinogen III sy 55.7 20 0.00069 27.4 5.3 39 111-151 215-253 (261)
141 3lou_A Formyltetrahydrofolate 55.6 15 0.00052 30.5 4.9 42 98-139 106-151 (292)
142 2k6g_A Replication factor C su 55.2 10 0.00036 27.2 3.3 26 110-135 69-96 (109)
143 3dao_A Putative phosphatse; st 54.6 17 0.00057 28.0 4.6 52 94-145 209-261 (283)
144 2bfw_A GLGA glycogen synthase; 54.0 7.7 0.00026 27.4 2.5 52 99-151 57-117 (200)
145 4es6_A Uroporphyrinogen-III sy 53.6 31 0.0011 26.5 6.1 40 110-151 212-251 (254)
146 1s2o_A SPP, sucrose-phosphatas 51.8 13 0.00046 28.2 3.7 52 94-145 160-212 (244)
147 3c48_A Predicted glycosyltrans 50.5 28 0.00096 27.6 5.4 55 98-152 262-328 (438)
148 2b30_A Pvivax hypothetical pro 50.0 15 0.0005 29.1 3.7 46 93-139 221-267 (301)
149 3pa6_A Microcephalin; BRCT dom 49.2 4.2 0.00014 29.1 0.4 41 98-138 27-76 (107)
150 3n0v_A Formyltetrahydrofolate 48.2 24 0.00081 29.2 4.9 42 98-139 101-146 (286)
151 2yj3_A Copper-transporting ATP 53.8 3.8 0.00013 31.9 0.0 82 43-134 139-221 (263)
152 3zx4_A MPGP, mannosyl-3-phosph 47.7 14 0.00047 27.9 3.1 47 95-141 175-224 (259)
153 2ebu_A Replication factor C su 47.4 14 0.00049 26.8 3.1 27 110-136 59-87 (112)
154 2gek_A Phosphatidylinositol ma 46.1 17 0.00059 28.2 3.5 50 100-151 230-284 (406)
155 3d8t_A Uroporphyrinogen-III sy 46.0 34 0.0012 27.0 5.3 39 111-151 240-278 (286)
156 2x6q_A Trehalose-synthase TRET 45.5 59 0.002 25.6 6.6 53 99-152 251-318 (416)
157 3tqr_A Phosphoribosylglycinami 45.4 16 0.00055 29.1 3.3 44 96-139 14-62 (215)
158 3hcz_A Possible thiol-disulfid 45.2 28 0.00095 23.0 4.0 44 99-142 51-98 (148)
159 3s2u_A UDP-N-acetylglucosamine 45.2 27 0.00091 28.3 4.6 36 102-139 24-59 (365)
160 3qiv_A Short-chain dehydrogena 45.1 92 0.0032 23.1 8.6 72 34-120 117-189 (253)
161 3kvo_A Hydroxysteroid dehydrog 45.0 75 0.0026 25.9 7.4 77 33-120 156-233 (346)
162 2ftc_A Mitochondrial ribosomal 44.3 18 0.0006 28.3 3.3 28 108-135 28-56 (189)
163 3o1l_A Formyltetrahydrofolate 44.0 23 0.00078 29.6 4.1 41 98-138 116-160 (302)
164 2b5x_A YKUV protein, TRXY; thi 43.9 29 0.001 22.8 4.0 35 101-135 51-93 (148)
165 4ap9_A Phosphoserine phosphata 43.3 11 0.00039 25.9 1.9 38 96-138 140-177 (201)
166 3llu_A RAS-related GTP-binding 42.7 41 0.0014 24.0 4.9 53 89-141 102-181 (196)
167 1xzo_A BSSCO, hypothetical pro 42.7 38 0.0013 23.3 4.6 42 101-142 56-108 (174)
168 3ch4_B Pmkase, phosphomevalona 42.5 16 0.00055 29.0 2.9 45 91-136 18-63 (202)
169 3qoy_A 50S ribosomal protein L 42.3 16 0.00054 30.0 2.8 27 109-136 73-99 (242)
170 1g16_A RAS-related protein SEC 42.3 66 0.0023 21.5 5.7 52 99-150 96-159 (170)
171 4e16_A Precorrin-4 C(11)-methy 41.2 76 0.0026 24.8 6.6 58 90-147 56-121 (253)
172 2hy7_A Glucuronosyltransferase 41.0 15 0.00051 30.1 2.5 49 97-152 235-287 (406)
173 2pln_A HP1043, response regula 40.6 53 0.0018 21.5 4.8 52 97-150 73-127 (137)
174 2uyo_A Hypothetical protein ML 40.2 46 0.0016 27.4 5.4 50 97-150 87-143 (310)
175 2cok_A Poly [ADP-ribose] polym 40.2 13 0.00045 27.0 1.9 29 110-138 46-78 (113)
176 3sc4_A Short chain dehydrogena 40.0 68 0.0023 24.8 6.1 78 32-120 119-197 (285)
177 3kcq_A Phosphoribosylglycinami 39.9 53 0.0018 26.0 5.5 44 96-139 17-66 (215)
178 1jr2_A Uroporphyrinogen-III sy 39.4 24 0.00083 27.8 3.4 40 110-151 238-277 (286)
179 3f1l_A Uncharacterized oxidore 39.0 1.1E+02 0.0039 22.9 7.1 84 23-121 113-196 (252)
180 4ds3_A Phosphoribosylglycinami 38.8 22 0.00074 28.2 3.1 44 96-139 16-65 (209)
181 4id3_A DNA repair protein REV1 38.7 36 0.0012 21.9 3.7 28 110-138 45-72 (92)
182 3aw8_A PURK, phosphoribosylami 38.7 54 0.0018 26.2 5.5 71 61-135 63-135 (369)
183 4dad_A Putative pilus assembly 38.1 85 0.0029 20.7 6.0 52 98-150 83-135 (146)
184 2z6r_A Diphthine synthase; met 37.7 65 0.0022 25.1 5.7 50 97-146 63-120 (265)
185 2qbu_A Precorrin-2 methyltrans 37.3 89 0.003 23.5 6.3 52 98-149 81-140 (232)
186 3re1_A Uroporphyrinogen-III sy 36.7 46 0.0016 26.0 4.7 41 110-152 220-260 (269)
187 2dtx_A Glucose 1-dehydrogenase 36.7 69 0.0024 24.5 5.6 83 23-120 94-176 (264)
188 3p9x_A Phosphoribosylglycinami 36.5 72 0.0025 25.3 5.8 43 97-139 12-60 (211)
189 3ndc_A Precorrin-4 C(11)-methy 36.1 1.1E+02 0.0038 24.2 6.9 58 90-147 55-120 (264)
190 2wji_A Ferrous iron transport 36.1 1E+02 0.0036 21.1 6.1 60 89-150 88-159 (165)
191 3vtz_A Glucose 1-dehydrogenase 36.0 79 0.0027 24.3 5.9 77 32-120 107-183 (269)
192 2x0d_A WSAF; GT4 family, trans 36.0 5.4 0.00018 33.3 -0.9 54 99-152 262-317 (413)
193 2lja_A Putative thiol-disulfid 35.9 53 0.0018 21.9 4.4 42 100-141 51-96 (152)
194 1v4v_A UDP-N-acetylglucosamine 35.5 76 0.0026 24.6 5.7 51 100-151 220-276 (376)
195 3hdv_A Response regulator; PSI 35.4 58 0.002 21.2 4.4 53 98-150 68-121 (136)
196 3lor_A Thiol-disulfide isomera 35.0 61 0.0021 21.8 4.6 37 99-135 51-97 (160)
197 4e7p_A Response regulator; DNA 34.5 73 0.0025 21.3 4.9 52 98-150 82-134 (150)
198 3cg0_A Response regulator rece 34.3 93 0.0032 20.0 5.3 34 98-133 71-104 (140)
199 3obi_A Formyltetrahydrofolate 34.2 18 0.00061 29.9 2.0 43 97-139 99-146 (288)
200 3i1j_A Oxidoreductase, short c 34.1 1.4E+02 0.0048 22.0 6.9 81 29-121 118-200 (247)
201 1uqt_A Alpha, alpha-trehalose- 33.9 58 0.002 28.2 5.2 56 97-152 273-354 (482)
202 3ezl_A Acetoacetyl-COA reducta 33.7 1.3E+02 0.0043 22.4 6.5 103 32-146 117-230 (256)
203 1ek0_A Protein (GTP-binding pr 33.5 1.1E+02 0.0036 20.4 6.1 51 101-151 98-164 (170)
204 3kto_A Response regulator rece 33.4 67 0.0023 21.1 4.5 33 98-131 68-100 (136)
205 3pdi_B Nitrogenase MOFE cofact 33.2 2.3E+02 0.008 24.3 10.5 74 61-139 317-401 (458)
206 3guy_A Short-chain dehydrogena 33.0 94 0.0032 22.8 5.7 80 28-120 94-174 (230)
207 3kc2_A Uncharacterized protein 32.9 8.3 0.00028 32.4 -0.3 100 40-139 166-319 (352)
208 1cbf_A Cobalt-precorrin-4 tran 32.8 1.6E+02 0.0054 23.3 7.3 52 95-146 77-136 (285)
209 3u42_A 50S ribosomal protein L 32.8 37 0.0013 27.5 3.6 28 108-136 69-96 (229)
210 3eyt_A Uncharacterized protein 32.8 51 0.0017 22.3 3.9 38 99-136 49-96 (158)
211 1k68_A Phytochrome response re 32.8 58 0.002 20.8 4.0 35 97-131 70-105 (140)
212 1u02_A Trehalose-6-phosphate p 32.4 44 0.0015 25.2 3.8 37 94-134 158-196 (239)
213 3hdg_A Uncharacterized protein 32.3 62 0.0021 21.0 4.1 31 98-129 67-97 (137)
214 3nkl_A UDP-D-quinovosamine 4-d 31.6 1.1E+02 0.0037 20.8 5.5 83 61-147 8-105 (141)
215 1vgv_A UDP-N-acetylglucosamine 31.0 1.1E+02 0.0039 23.5 6.0 53 99-152 227-285 (384)
216 2e0n_A Precorrin-2 C20-methylt 30.4 1.1E+02 0.0039 23.7 6.0 51 98-148 83-141 (259)
217 2d8m_A DNA-repair protein XRCC 30.3 34 0.0012 24.3 2.7 31 109-139 57-88 (129)
218 3o38_A Short chain dehydrogena 30.3 1.7E+02 0.0059 21.9 7.0 79 31-120 126-205 (266)
219 2qr3_A Two-component system re 30.1 99 0.0034 19.9 4.8 33 98-131 68-100 (140)
220 1pp9_B Ubiquinol-cytochrome C 30.0 67 0.0023 25.4 4.6 43 76-119 166-211 (439)
221 3l3e_A DNA topoisomerase 2-bin 30.0 40 0.0014 22.9 2.9 32 108-139 49-84 (107)
222 4imr_A 3-oxoacyl-(acyl-carrier 29.9 1.1E+02 0.0038 23.6 5.8 33 88-120 179-212 (275)
223 3nyw_A Putative oxidoreductase 29.8 79 0.0027 23.9 4.9 79 31-121 111-190 (250)
224 2zc2_A DNAD-like replication p 29.7 37 0.0013 22.1 2.6 42 5-47 4-45 (78)
225 3gaf_A 7-alpha-hydroxysteroid 29.6 1.8E+02 0.0062 21.9 7.5 109 24-147 109-229 (256)
226 3nrc_A Enoyl-[acyl-carrier-pro 29.5 88 0.003 24.0 5.1 79 27-118 129-208 (280)
227 1jkx_A GART;, phosphoribosylgl 29.4 83 0.0029 24.6 5.1 44 96-139 9-58 (212)
228 1zsq_A Myotubularin-related pr 29.1 24 0.00083 32.0 2.1 38 39-77 317-366 (528)
229 1xvi_A MPGP, YEDP, putative ma 28.9 36 0.0012 26.2 2.8 48 93-140 186-237 (275)
230 1zzo_A RV1677; thioredoxin fol 28.8 84 0.0029 20.1 4.2 18 101-119 47-64 (136)
231 1wr2_A Hypothetical protein PH 28.8 47 0.0016 25.4 3.4 44 95-139 20-65 (238)
232 4iiu_A 3-oxoacyl-[acyl-carrier 28.3 1.9E+02 0.0065 21.7 7.1 64 85-148 172-245 (267)
233 3tox_A Short chain dehydrogena 28.3 1.7E+02 0.0058 22.6 6.7 105 31-146 111-230 (280)
234 3cph_A RAS-related protein SEC 28.2 1E+02 0.0036 21.6 5.0 51 99-149 113-175 (213)
235 1c9k_A COBU, adenosylcobinamid 28.1 34 0.0012 26.4 2.5 38 89-127 4-41 (180)
236 3t4x_A Oxidoreductase, short c 28.1 1.5E+02 0.0052 22.4 6.3 82 24-120 106-188 (267)
237 3u7q_A Nitrogenase molybdenum- 28.1 3E+02 0.01 24.0 9.6 72 62-139 353-443 (492)
238 2qnr_A Septin-2, protein NEDD5 27.9 7.2 0.00025 31.5 -1.4 56 96-151 200-262 (301)
239 2i33_A Acid phosphatase; HAD s 27.8 1.1E+02 0.0038 24.1 5.5 90 45-139 106-216 (258)
240 3sx2_A Putative 3-ketoacyl-(ac 27.7 69 0.0024 24.3 4.2 87 24-120 119-206 (278)
241 3da8_A Probable 5'-phosphoribo 27.7 64 0.0022 25.5 4.1 44 96-139 21-68 (215)
242 3p9z_A Uroporphyrinogen III co 27.6 1.4E+02 0.0048 22.6 6.0 48 101-151 173-222 (229)
243 4gl0_A LMO0810 protein; struct 27.6 1.1E+02 0.0039 23.5 5.5 33 88-120 14-46 (333)
244 3grc_A Sensor protein, kinase; 27.4 1.3E+02 0.0044 19.5 5.3 53 98-150 66-121 (140)
245 1k66_A Phytochrome response re 27.2 55 0.0019 21.3 3.1 33 98-130 78-111 (149)
246 3i4f_A 3-oxoacyl-[acyl-carrier 27.2 1.9E+02 0.0066 21.5 6.8 107 32-148 113-230 (264)
247 3pk0_A Short-chain dehydrogena 27.1 2E+02 0.007 21.7 7.4 104 32-146 114-228 (262)
248 1meo_A Phosophoribosylglycinam 26.9 95 0.0033 24.2 5.0 44 96-139 9-58 (209)
249 2bd0_A Sepiapterin reductase; 26.7 1.7E+02 0.0057 21.4 6.1 35 84-118 152-187 (244)
250 1wde_A Probable diphthine synt 26.3 58 0.002 26.2 3.7 49 98-146 71-126 (294)
251 3kcn_A Adenylate cyclase homol 26.2 1E+02 0.0036 20.5 4.5 32 98-130 64-95 (151)
252 3j21_A 50S ribosomal protein L 26.1 64 0.0022 25.6 3.9 35 109-147 57-91 (216)
253 2deb_A CPT II, carnitine O-pal 26.0 69 0.0024 29.5 4.6 76 17-121 284-360 (653)
254 3rjz_A N-type ATP pyrophosphat 26.0 1.9E+02 0.0065 23.2 6.7 28 124-151 56-87 (237)
255 3zv4_A CIS-2,3-dihydrobiphenyl 26.0 78 0.0027 24.4 4.3 36 85-120 150-185 (281)
256 1yb1_A 17-beta-hydroxysteroid 25.7 91 0.0031 23.7 4.6 80 28-120 130-214 (272)
257 3e03_A Short chain dehydrogena 25.7 1.1E+02 0.0038 23.4 5.1 77 33-120 117-195 (274)
258 2r25_B Osmosensing histidine p 25.6 1.3E+02 0.0045 19.6 4.9 28 98-125 68-95 (133)
259 3lyl_A 3-oxoacyl-(acyl-carrier 25.6 1.9E+02 0.0065 21.3 6.2 63 85-147 149-222 (247)
260 3u9l_A 3-oxoacyl-[acyl-carrier 25.6 1.4E+02 0.005 23.8 5.9 81 29-120 110-191 (324)
261 2y8e_A RAB-protein 6, GH09086P 25.5 1.5E+02 0.0053 19.8 6.4 52 100-151 108-172 (179)
262 3vus_A Poly-beta-1,6-N-acetyl- 25.4 28 0.00097 27.8 1.7 17 103-119 85-101 (268)
263 2h30_A Thioredoxin, peptide me 25.4 46 0.0016 22.6 2.6 41 101-141 60-109 (164)
264 2wwq_5 50S ribosomal protein L 25.4 39 0.0013 27.3 2.5 26 109-135 70-95 (234)
265 4dkx_A RAS-related protein RAB 25.3 73 0.0025 24.2 3.9 42 100-141 107-159 (216)
266 2i5u_A DNAD domain protein; st 25.1 1.4E+02 0.0047 19.8 4.9 41 6-47 3-50 (83)
267 3e9n_A Putative short-chain de 25.0 95 0.0032 23.1 4.5 36 85-120 141-177 (245)
268 3cnb_A DNA-binding response re 25.0 1.1E+02 0.0038 19.7 4.4 33 98-130 70-103 (143)
269 2iuy_A Avigt4, glycosyltransfe 25.0 57 0.0019 25.0 3.3 42 111-152 188-234 (342)
270 1z08_A RAS-related protein RAB 25.0 1.6E+02 0.0053 19.6 5.7 49 102-150 102-163 (170)
271 3osu_A 3-oxoacyl-[acyl-carrier 24.8 1.4E+02 0.0047 22.3 5.4 64 85-148 149-223 (246)
272 2zos_A MPGP, mannosyl-3-phosph 24.7 60 0.002 24.5 3.3 42 94-135 177-220 (249)
273 3a1s_A Iron(II) transport prot 24.7 1.9E+02 0.0066 22.3 6.4 60 88-149 89-160 (258)
274 3hzh_A Chemotaxis response reg 24.6 1.2E+02 0.0041 20.5 4.6 29 98-127 99-127 (157)
275 1oaa_A Sepiapterin reductase; 24.5 1.9E+02 0.0065 21.6 6.1 79 30-120 119-198 (259)
276 4hhu_A OR280; engineered prote 24.4 36 0.0012 26.6 2.0 41 101-151 62-102 (170)
277 3jte_A Response regulator rece 24.4 1.5E+02 0.0051 19.2 5.2 33 98-131 65-97 (143)
278 2l5o_A Putative thioredoxin; s 24.4 1.2E+02 0.004 20.2 4.5 34 101-134 50-88 (153)
279 3dii_A Short-chain dehydrogena 24.3 1.4E+02 0.0047 22.4 5.3 62 85-146 141-208 (247)
280 1qkk_A DCTD, C4-dicarboxylate 24.0 1.6E+02 0.0056 19.5 5.2 33 98-131 63-95 (155)
281 4as2_A Phosphorylcholine phosp 23.9 85 0.0029 26.0 4.4 35 57-93 159-195 (327)
282 1l7b_A DNA ligase; BRCT, autos 23.9 21 0.00071 24.8 0.5 28 110-137 43-71 (92)
283 1uzm_A 3-oxoacyl-[acyl-carrier 23.9 1.8E+02 0.0062 21.7 5.9 36 85-120 148-184 (247)
284 3uf0_A Short-chain dehydrogena 23.8 2E+02 0.0069 22.1 6.3 62 85-146 173-247 (273)
285 3svt_A Short-chain type dehydr 23.7 2E+02 0.0067 21.9 6.2 63 85-147 159-234 (281)
286 4iin_A 3-ketoacyl-acyl carrier 23.6 1.1E+02 0.0037 23.3 4.6 63 85-147 174-247 (271)
287 2efe_B Small GTP-binding prote 23.6 1.7E+02 0.006 19.7 5.5 51 101-151 107-170 (181)
288 1y7t_A Malate dehydrogenase; N 23.4 92 0.0032 24.9 4.4 47 83-136 146-196 (327)
289 3m1a_A Putative dehydrogenase; 23.4 1.6E+02 0.0056 22.2 5.6 36 84-119 145-181 (281)
290 4egf_A L-xylulose reductase; s 23.3 2.4E+02 0.0084 21.3 7.1 64 84-147 165-241 (266)
291 2c7p_A Modification methylase 23.3 1.1E+02 0.0037 25.2 4.9 44 65-108 97-140 (327)
292 3p2a_A Thioredoxin 2, putative 23.2 73 0.0025 21.6 3.3 38 99-137 75-115 (148)
293 3beo_A UDP-N-acetylglucosamine 23.1 1.1E+02 0.0036 23.5 4.5 50 100-151 228-284 (375)
294 2f9f_A First mannosyl transfer 23.1 46 0.0016 23.4 2.3 43 110-152 49-100 (177)
295 4dqx_A Probable oxidoreductase 23.1 1.8E+02 0.006 22.5 5.8 82 24-120 122-204 (277)
296 3rkr_A Short chain oxidoreduct 23.0 2E+02 0.0069 21.6 6.1 78 31-120 132-210 (262)
297 3foz_A TRNA delta(2)-isopenten 22.9 1.5E+02 0.0053 25.0 5.8 87 39-152 82-174 (316)
298 3nrb_A Formyltetrahydrofolate 22.9 22 0.00076 29.4 0.6 42 98-139 99-145 (287)
299 3eul_A Possible nitrate/nitrit 22.9 1.6E+02 0.0053 19.5 4.9 32 98-130 77-108 (152)
300 2rjn_A Response regulator rece 22.7 1.7E+02 0.0059 19.3 5.2 33 97-130 66-98 (154)
301 3lf2_A Short chain oxidoreduct 22.6 1.8E+02 0.0063 21.9 5.8 83 23-120 107-190 (265)
302 3eod_A Protein HNR; response r 22.5 70 0.0024 20.5 2.9 34 98-132 67-102 (130)
303 2qvg_A Two component response 22.4 1.4E+02 0.0049 19.3 4.5 53 98-150 75-129 (143)
304 3tjr_A Short chain dehydrogena 22.4 1.9E+02 0.0066 22.4 6.0 82 28-120 130-212 (301)
305 2obi_A PHGPX, GPX-4, phospholi 22.3 76 0.0026 22.5 3.3 37 101-137 69-116 (183)
306 2cc0_A Acetyl-xylan esterase; 22.2 76 0.0026 23.5 3.4 36 103-141 24-63 (195)
307 3heb_A Response regulator rece 22.2 1.4E+02 0.0047 19.8 4.5 33 98-130 75-108 (152)
308 1lw3_A Myotubularin-related pr 21.9 39 0.0013 31.7 2.1 38 39-77 389-438 (657)
309 3erw_A Sporulation thiol-disul 21.9 1.2E+02 0.0041 19.6 4.1 38 100-137 55-99 (145)
310 2gs3_A PHGPX, GPX-4, phospholi 21.8 1.1E+02 0.0036 21.9 4.1 36 101-136 71-117 (185)
311 3dz8_A RAS-related protein RAB 21.8 2.1E+02 0.0071 19.9 6.0 51 100-150 117-180 (191)
312 2g9p_A Antimicrobial peptide l 21.7 31 0.001 19.7 0.8 13 100-112 2-14 (26)
313 2cvb_A Probable thiol-disulfid 21.7 1.2E+02 0.0042 21.2 4.3 19 100-118 54-72 (188)
314 3f6c_A Positive transcription 21.7 98 0.0034 19.8 3.5 34 97-131 61-94 (134)
315 2ywi_A Hypothetical conserved 21.6 95 0.0033 21.8 3.7 18 101-118 68-86 (196)
316 2nu8_B SCS-beta, succinyl-COA 21.5 1.1E+02 0.0037 26.0 4.6 39 102-140 9-50 (388)
317 3ilh_A Two component response 21.5 1.7E+02 0.0058 18.8 5.3 53 98-150 76-133 (146)
318 3oid_A Enoyl-[acyl-carrier-pro 21.5 2E+02 0.0068 21.8 5.8 109 24-147 103-224 (258)
319 1xq1_A Putative tropinone redu 21.3 2.1E+02 0.007 21.3 5.7 35 85-119 159-194 (266)
320 3v7q_A Probable ribosomal prot 21.3 1.2E+02 0.004 20.9 4.0 51 94-150 21-77 (101)
321 1wcw_A Uroporphyrinogen III sy 21.1 1.1E+02 0.0036 23.3 4.1 37 111-150 91-127 (261)
322 3n53_A Response regulator rece 20.9 64 0.0022 21.1 2.5 53 98-150 62-116 (140)
323 3ufx_B Succinyl-COA synthetase 20.9 90 0.0031 26.7 4.0 38 102-139 9-48 (397)
324 1ny1_A Probable polysaccharide 20.6 82 0.0028 24.4 3.4 36 103-141 63-102 (240)
325 3ctm_A Carbonyl reductase; alc 20.6 1.3E+02 0.0044 22.7 4.5 34 85-118 182-215 (279)
326 2r7k_A 5-formaminoimidazole-4- 20.6 1.9E+02 0.0066 24.1 5.9 47 95-142 2-51 (361)
327 2b8t_A Thymidine kinase; deoxy 20.5 33 0.0011 27.0 1.1 60 77-137 5-69 (223)
328 1jfu_A Thiol:disulfide interch 20.5 83 0.0028 22.0 3.2 41 101-141 82-127 (186)
329 2qsj_A DNA-binding response re 20.5 1.6E+02 0.0053 19.5 4.5 33 98-131 66-98 (154)
330 1yxo_A 4-hydroxythreonine-4-ph 20.4 41 0.0014 28.8 1.8 39 93-133 13-51 (328)
331 1s4d_A Uroporphyrin-III C-meth 20.4 1.5E+02 0.0053 23.4 5.1 50 97-146 78-135 (280)
332 2r60_A Glycosyl transferase, g 20.3 79 0.0027 25.8 3.4 52 99-150 282-355 (499)
333 3kkq_A RAS-related protein M-R 20.2 2.1E+02 0.0073 19.4 6.1 50 101-150 112-176 (183)
334 2v1m_A Glutathione peroxidase; 20.2 1.2E+02 0.0043 20.4 4.0 37 101-137 53-101 (169)
335 2fu5_C RAS-related protein RAB 20.1 2.1E+02 0.0073 19.4 6.1 49 102-150 104-165 (183)
336 2g6b_A RAS-related protein RAB 20.1 2.1E+02 0.0071 19.3 5.5 50 101-150 106-168 (180)
337 2hl7_A Cytochrome C-type bioge 20.1 72 0.0024 22.3 2.7 18 97-114 62-79 (84)
338 3kij_A Probable glutathione pe 20.0 1.1E+02 0.0039 21.6 3.8 35 101-135 60-106 (180)
339 1w4v_A Thioredoxin, mitochondr 20.0 1.1E+02 0.0037 20.0 3.5 17 101-117 53-69 (119)
340 3kht_A Response regulator; PSI 20.0 1.3E+02 0.0043 19.7 3.9 33 98-130 67-100 (144)
No 1
>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A
Probab=100.00 E-value=2.6e-84 Score=549.22 Aligned_cols=151 Identities=59% Similarity=1.021 Sum_probs=150.0
Q ss_pred CcchhhhhhcccccCChhhHHHHHHHHHHhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhccccc
Q psy11337 5 PPNETTARLDACGLLGPAKREEWLQLRAEIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIF 84 (155)
Q Consensus 5 ~~~y~~Y~~nv~~Ll~~~~r~~w~~lr~e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~f 84 (155)
+|+||+|||||+||||+++|++|++||+|||.+||+|||+|+|||++|++|+||+||||||||||||||||||||||++|
T Consensus 124 keiY~~y~~nv~~LL~~~~r~~w~~lr~e~e~~Td~WLs~a~k~L~~i~sr~~~vNVLVTs~qLVPaLaK~LLygL~~~f 203 (274)
T 3geb_A 124 KEMYNTYKNNVGGLIGTPKRETWLQLRAELEALTDLWLTHSLKALNLINSRPNCVNVLVTTTQLIPALAKVLLYGLGSVF 203 (274)
T ss_dssp HHHHHHHTTCHHHHHCTTHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHSTTEEEEEEESSCHHHHHHHHHHTTCTTTS
T ss_pred HHHHhhhhcccccccCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccCCceeEEEEecCchHHHHHHHHHhhcccce
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccccccccChhhHHHHHHHHhCCCceEEEecCCHHHHHHHHHcCCceeEecccccHHHHHHHhhcCCC
Q psy11337 85 DVENIYSSTKIGKDSCFERIVTRFGRKCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDLAALYHALDNGFL 155 (155)
Q Consensus 85 pieNIYSa~k~GKescFerI~~RFG~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~~L~~al~~~~l 155 (155)
||||||||+|+|||||||||++||||||+|||||||+|||+|||+||||||||++|||+.+||+|||++||
T Consensus 204 pieNIYSa~kiGKesCFerI~~RFG~k~~yvvIGDG~eEe~AAk~~n~PFwrI~~h~Dl~~l~~al~l~~l 274 (274)
T 3geb_A 204 PIENIYSATKTGKESCFERIMQRFGRKAVYVVIGDGVEEEQGAKKHNMPFWRISCHADLEALRHALELEYL 274 (274)
T ss_dssp CGGGEEETTTTCHHHHHHHHHHHHCTTSEEEEEESSHHHHHHHHHTTCCEEECCSHHHHHHHHHHHHHEEC
T ss_pred ecccccchhhcCHHHHHHHHHHHhCCCceEEEECCCHHHHHHHHHcCCCeEEeecCccHHHHHHhhccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997
No 2
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=97.77 E-value=0.00018 Score=48.80 Aligned_cols=98 Identities=12% Similarity=0.090 Sum_probs=69.2
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccC--h--hhHHHHHHHHhCCC-ceEEEecC
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIG--K--DSCFERIVTRFGRK-CTYVVIGD 119 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~G--K--escFerI~~RFG~k-~~yvvIGD 119 (155)
+..+|+.+.++ +..-+++|++.--..-.++--+|+..+| +.++++..++ | ...|+.+.+++|-+ -.-++|||
T Consensus 23 ~~~~l~~L~~~-G~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD 99 (137)
T 2pr7_A 23 WRNLLAAAKKN-GVGTVILSNDPGGLGAAPIRELETNGVV--DKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLVDD 99 (137)
T ss_dssp HHHHHHHHHHT-TCEEEEEECSCCGGGGHHHHHHHHTTSS--SEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEEEES
T ss_pred HHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHCChHhhc--cEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEEcC
Confidence 44455555444 4555788886554433333455777776 5677765543 3 57999999999844 46778999
Q ss_pred CHHHHHHHHHcCCceeEecccccHHH
Q psy11337 120 GQDEEAAAKQRNFPFWRISSRSDLAA 145 (155)
Q Consensus 120 G~eEe~aAk~~~~PFwrI~~~~Dl~~ 145 (155)
+...-++|++.||+++-++...+..+
T Consensus 100 ~~~di~~a~~~G~~~i~~~~~~~~~~ 125 (137)
T 2pr7_A 100 SILNVRGAVEAGLVGVYYQQFDRAVV 125 (137)
T ss_dssp CHHHHHHHHHHTCEEEECSCHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEeCChHHHHH
Confidence 99999999999999999988766544
No 3
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=97.50 E-value=0.0017 Score=45.88 Aligned_cols=92 Identities=15% Similarity=0.191 Sum_probs=63.2
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccC----hhhHHHHHHHHhC-CCceEEEecCC
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIG----KDSCFERIVTRFG-RKCTYVVIGDG 120 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~G----KescFerI~~RFG-~k~~yvvIGDG 120 (155)
...|+.+.++ +..-+++|++.--..-.++--+|+..+| +.++++-.++ |...|+.+.+++| +.-.-++|||+
T Consensus 90 ~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~~~~~~f--~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~iGD~ 166 (216)
T 2pib_A 90 REALEFVKSK-RIKLALATSTPQREALERLRRLDLEKYF--DVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDS 166 (216)
T ss_dssp HHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEEEEECS
T ss_pred HHHHHHHHHC-CCCEEEEeCCcHHhHHHHHHhcChHHhc--CEEeecccCCCCCcCcHHHHHHHHHcCCCCceEEEEeCc
Confidence 4444444443 3445566766543333333345777777 5566665433 5779999999998 44667899999
Q ss_pred HHHHHHHHHcCCcee--Eeccc
Q psy11337 121 QDEEAAAKQRNFPFW--RISSR 140 (155)
Q Consensus 121 ~eEe~aAk~~~~PFw--rI~~~ 140 (155)
...-++|+..||++. -+...
T Consensus 167 ~~Di~~a~~aG~~~i~~~v~~~ 188 (216)
T 2pib_A 167 KSGVEAAKSAGIERIYGVVHSL 188 (216)
T ss_dssp HHHHHHHHHTTCCEEEEECCSS
T ss_pred HHHHHHHHHcCCcEEehccCCC
Confidence 999999999999998 77663
No 4
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=97.49 E-value=0.0011 Score=48.96 Aligned_cols=100 Identities=19% Similarity=0.238 Sum_probs=65.0
Q ss_pred HHHhhhhcCCCceEEEEeCCCchHHHHH-HHHhhcccccccCccccccccChhhHHHHHHHHhCC-CceEEEecCCHHHH
Q psy11337 47 KCLTLINQRPSCTNVIVITTQLIPALSK-IMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFGR-KCTYVVIGDGQDEE 124 (155)
Q Consensus 47 k~L~~i~~r~~~vNVLVTt~qLVpaLaK-~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG~-k~~yvvIGDG~eEe 124 (155)
.+|+.+.++ +..-+++|++.--+.+.+ +=-+|+..+|....+++ -.|...|+++.+++|- .-.-++|||+...-
T Consensus 75 e~L~~L~~~-G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~~~~---~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di 150 (187)
T 2wm8_A 75 EVLKRLQSL-GVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYP---GSKITHFERLQQKTGIPFSQMIFFDDERRNI 150 (187)
T ss_dssp HHHHHHHHH-TCCEEEEECCSCHHHHHHHHHHTTCTTTEEEEEESS---SCHHHHHHHHHHHHCCCGGGEEEEESCHHHH
T ss_pred HHHHHHHHC-CceEEEEeCCCChHHHHHHHHHcCcHhhcceeEEEe---CchHHHHHHHHHHcCCChHHEEEEeCCccCh
Confidence 344444332 344567776652122222 22457777776433444 2578899999999984 45678899999888
Q ss_pred HHHHHcCCceeEecccccHHHHHHHh
Q psy11337 125 AAAKQRNFPFWRISSRSDLAALYHAL 150 (155)
Q Consensus 125 ~aAk~~~~PFwrI~~~~Dl~~L~~al 150 (155)
++|++.|++++-+.....-..+..++
T Consensus 151 ~~a~~aG~~~i~v~~g~~~~~~~~~l 176 (187)
T 2wm8_A 151 VDVSKLGVTCIHIQNGMNLQTLSQGL 176 (187)
T ss_dssp HHHHTTTCEEEECSSSCCHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHH
Confidence 99999999999998754444444443
No 5
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=97.48 E-value=0.00037 Score=50.46 Aligned_cols=100 Identities=16% Similarity=0.240 Sum_probs=70.3
Q ss_pred HHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHH-------hhcccccccCcccccccc--Ch--hhHHHHHHHHhC-C
Q psy11337 43 SLAIKCLTLINQRPSCTNVIVITTQLIPALSKIML-------FGLSGIFDVENIYSSTKI--GK--DSCFERIVTRFG-R 110 (155)
Q Consensus 43 s~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LL-------ygL~~~fpieNIYSa~k~--GK--escFerI~~RFG-~ 110 (155)
.-+...|+.+.+ +.--++||++. -..+.+.+= +|+..+| +.++++..+ +| ...|+++.+++| +
T Consensus 92 ~~~~~~l~~l~~--g~~~~i~t~~~-~~~~~~~~~~l~~~~~~~l~~~f--~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 166 (211)
T 2i6x_A 92 AEKFDYIDSLRP--DYRLFLLSNTN-PYVLDLAMSPRFLPSGRTLDSFF--DKVYASCQMGKYKPNEDIFLEMIADSGMK 166 (211)
T ss_dssp HHHHHHHHHHTT--TSEEEEEECCC-HHHHHHHTSTTSSTTCCCGGGGS--SEEEEHHHHTCCTTSHHHHHHHHHHHCCC
T ss_pred hHHHHHHHHHHc--CCeEEEEeCCC-HHHHHHHHhhhccccccCHHHHc--CeEEeecccCCCCCCHHHHHHHHHHhCCC
Confidence 345666666655 55566777764 233333332 5777666 456665443 34 569999999998 4
Q ss_pred CceEEEecCCHHHHHHHHHcCCceeEecccccHHHHH
Q psy11337 111 KCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDLAALY 147 (155)
Q Consensus 111 k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~~L~ 147 (155)
.-.-++|||+..--++|+..||+++-++..+++.+..
T Consensus 167 ~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~~~~~~l 203 (211)
T 2i6x_A 167 PEETLFIDDGPANVATAERLGFHTYCPDNGENWIPAI 203 (211)
T ss_dssp GGGEEEECSCHHHHHHHHHTTCEEECCCTTCCCHHHH
T ss_pred hHHeEEeCCCHHHHHHHHHcCCEEEEECCHHHHHHHH
Confidence 4567889999999999999999999999988766543
No 6
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=97.48 E-value=0.0019 Score=48.75 Aligned_cols=103 Identities=16% Similarity=0.182 Sum_probs=68.0
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCcccccccc--C--hhhHHHHHHHHhC-CCceEEEecCC
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKI--G--KDSCFERIVTRFG-RKCTYVVIGDG 120 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~--G--KescFerI~~RFG-~k~~yvvIGDG 120 (155)
..+|+.+. +..-+++|++.---.-.++=-+|+..+| +.++++-.+ + |...|+.+.+++| +.-.-++|||+
T Consensus 99 ~~~l~~l~---g~~~~i~t~~~~~~~~~~l~~~gl~~~f--~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~ 173 (253)
T 1qq5_A 99 AQCLAELA---PLKRAILSNGAPDMLQALVANAGLTDSF--DAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSN 173 (253)
T ss_dssp HHHHHHHT---TSEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEEEESC
T ss_pred HHHHHHHc---CCCEEEEeCcCHHHHHHHHHHCCchhhc--cEEEEccccCCCCCCHHHHHHHHHHcCCCHHHEEEEeCC
Confidence 34444444 5555678877533222223335777776 567776554 3 5669999999998 44567788999
Q ss_pred HHHHHHHHHcCCceeEecccccHHHHHHHhhcCC
Q psy11337 121 QDEEAAAKQRNFPFWRISSRSDLAALYHALDNGF 154 (155)
Q Consensus 121 ~eEe~aAk~~~~PFwrI~~~~Dl~~L~~al~~~~ 154 (155)
..--++|+..|+++.-++.. +..+|..+|+.||
T Consensus 174 ~~Di~~a~~aG~~~~~~~~~-~~~~~~~~l~~g~ 206 (253)
T 1qq5_A 174 GFDVGGAKNFGFSVARVARL-SQEALARELVSGT 206 (253)
T ss_dssp HHHHHHHHHHTCEEEEECCS-CHHHHHHHTTSSS
T ss_pred hhhHHHHHHCCCEEEEECCc-ccchhhhhccccc
Confidence 98899999999999988761 2345555555444
No 7
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=97.47 E-value=0.0011 Score=47.65 Aligned_cols=98 Identities=15% Similarity=0.091 Sum_probs=67.2
Q ss_pred HHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCcccccccc--Ch--hhHHHHHHHHhC-CCceEEEec
Q psy11337 44 LAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKI--GK--DSCFERIVTRFG-RKCTYVVIG 118 (155)
Q Consensus 44 ~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~--GK--escFerI~~RFG-~k~~yvvIG 118 (155)
-+.+.|+.+.++. .-+++|++.-.-.-..+=-+|+..+| +.++++..+ +| ...|+.+.+++| +.-.-++||
T Consensus 90 ~~~~~l~~l~~~g--~~~i~s~~~~~~~~~~l~~~~~~~~f--~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vg 165 (200)
T 3cnh_A 90 EVLALARDLGQRY--RMYSLNNEGRDLNEYRIRTFGLGEFL--LAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAVMVD 165 (200)
T ss_dssp HHHHHHHHHTTTS--EEEEEECCCHHHHHHHHHHHTGGGTC--SCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGEEEEE
T ss_pred cHHHHHHHHHHcC--CEEEEeCCcHHHHHHHHHhCCHHHhc--ceEEeecccCCCCCCHHHHHHHHHHcCCCHHHeEEeC
Confidence 3455666665553 55677877533222222334676666 456665543 44 459999999998 445678899
Q ss_pred CCHHHHHHHHHcCCceeEecccccHHH
Q psy11337 119 DGQDEEAAAKQRNFPFWRISSRSDLAA 145 (155)
Q Consensus 119 DG~eEe~aAk~~~~PFwrI~~~~Dl~~ 145 (155)
|+..--++|+..||+++-+........
T Consensus 166 D~~~Di~~a~~aG~~~~~~~~~~~~~~ 192 (200)
T 3cnh_A 166 DRLQNVQAARAVGMHAVQCVDAAQLRE 192 (200)
T ss_dssp SCHHHHHHHHHTTCEEEECSCHHHHHH
T ss_pred CCHHHHHHHHHCCCEEEEECCchhhHH
Confidence 999999999999999999988665443
No 8
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=97.37 E-value=0.0016 Score=46.14 Aligned_cols=95 Identities=14% Similarity=0.138 Sum_probs=65.1
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCcccccccc----ChhhHHHHHHHHhCCCceEEEecCC
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKI----GKDSCFERIVTRFGRKCTYVVIGDG 120 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~----GKescFerI~~RFG~k~~yvvIGDG 120 (155)
+.+.|+.+.++ +..-+++|++.- ..-..+=-+++..+| +.++++..+ .|...|+++.+++|-+ .-++|||+
T Consensus 87 ~~~~l~~l~~~-g~~~~i~t~~~~-~~~~~l~~~~~~~~f--~~~~~~~~~~~~kp~~~~~~~~~~~~~~~-~~~~iGD~ 161 (190)
T 2fi1_A 87 VSDLLEDISNQ-GGRHFLVSHRND-QVLEILEKTSIAAYF--TEVVTSSSGFKRKPNPESMLYLREKYQIS-SGLVIGDR 161 (190)
T ss_dssp HHHHHHHHHHT-TCEEEEECSSCT-HHHHHHHHTTCGGGE--EEEECGGGCCCCTTSCHHHHHHHHHTTCS-SEEEEESS
T ss_pred HHHHHHHHHHC-CCcEEEEECCcH-HHHHHHHHcCCHhhe--eeeeeccccCCCCCCHHHHHHHHHHcCCC-eEEEEcCC
Confidence 44455555443 344566776642 222222235666666 346665433 3689999999999987 99999999
Q ss_pred HHHHHHHHHcCCceeEecccccHH
Q psy11337 121 QDEEAAAKQRNFPFWRISSRSDLA 144 (155)
Q Consensus 121 ~eEe~aAk~~~~PFwrI~~~~Dl~ 144 (155)
..--++|+..|++++-+...+++.
T Consensus 162 ~~Di~~a~~aG~~~~~~~~~~~~~ 185 (190)
T 2fi1_A 162 PIDIEAGQAAGLDTHLFTSIVNLR 185 (190)
T ss_dssp HHHHHHHHHTTCEEEECSCHHHHH
T ss_pred HHHHHHHHHcCCeEEEECCCCChh
Confidence 999999999999999998766543
No 9
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=97.31 E-value=0.0013 Score=48.59 Aligned_cols=92 Identities=21% Similarity=0.317 Sum_probs=64.7
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCc-hHHHHHHHH--hhcccccccCccccccc------cCh--hhHHHHHHHHhC-CCc
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQL-IPALSKIML--FGLSGIFDVENIYSSTK------IGK--DSCFERIVTRFG-RKC 112 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qL-VpaLaK~LL--ygL~~~fpieNIYSa~k------~GK--escFerI~~RFG-~k~ 112 (155)
+..+|+.+.++ +..-++||++.- .+..++-+| +|+..+| +.|+++.. .+| ..+|+++.+++| ..-
T Consensus 39 ~~~~L~~L~~~-g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~ 115 (189)
T 3ib6_A 39 AKETLEKVKQL-GFKQAILSNTATSDTEVIKRVLTNFGIIDYF--DFIYASNSELQPGKMEKPDKTIFDFTLNALQIDKT 115 (189)
T ss_dssp HHHHHHHHHHT-TCEEEEEECCSSCCHHHHHHHHHHTTCGGGE--EEEEECCTTSSTTCCCTTSHHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHHHC-CCEEEEEECCCccchHHHHHHHHhcCchhhe--EEEEEccccccccCCCCcCHHHHHHHHHHcCCCcc
Confidence 34455555443 455578887654 223333333 5666777 47887764 345 479999999998 447
Q ss_pred eEEEecCC-HHHHHHHHHcCCceeEecc
Q psy11337 113 TYVVIGDG-QDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 113 ~yvvIGDG-~eEe~aAk~~~~PFwrI~~ 139 (155)
.-++|||+ ...-+||++.||+++-+..
T Consensus 116 ~~l~VGD~~~~Di~~A~~aG~~~i~v~~ 143 (189)
T 3ib6_A 116 EAVMVGNTFESDIIGANRAGIHAIWLQN 143 (189)
T ss_dssp GEEEEESBTTTTHHHHHHTTCEEEEECC
T ss_pred cEEEECCCcHHHHHHHHHCCCeEEEECC
Confidence 78999999 6899999999999998864
No 10
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=97.27 E-value=0.00036 Score=51.83 Aligned_cols=99 Identities=16% Similarity=0.186 Sum_probs=68.7
Q ss_pred HHHHHHHhhhhcCCCceEEEEeCCCchHHHH--HHH----HhhcccccccCcccccccc--Chh--hHHHHHHHHhC-CC
Q psy11337 43 SLAIKCLTLINQRPSCTNVIVITTQLIPALS--KIM----LFGLSGIFDVENIYSSTKI--GKD--SCFERIVTRFG-RK 111 (155)
Q Consensus 43 s~A~k~L~~i~~r~~~vNVLVTt~qLVpaLa--K~L----LygL~~~fpieNIYSa~k~--GKe--scFerI~~RFG-~k 111 (155)
.-+..+|+.+.++ ..-+++|++.-...-. +.| -+|+..+| +.++++..+ +|. ..|+++.+++| +.
T Consensus 115 ~~~~~~l~~l~~~--~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~f--d~i~~~~~~~~~KP~~~~~~~~~~~~g~~~ 190 (229)
T 4dcc_A 115 TYKLDLLLKLREK--YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYF--EKTYLSYEMKMAKPEPEIFKAVTEDAGIDP 190 (229)
T ss_dssp HHHHHHHHHHTTT--SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHC--SEEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred HHHHHHHHHHHhc--CcEEEEECCChHHHHHHHhhhhhhccCCHHHhC--CEEEeecccCCCCCCHHHHHHHHHHcCCCH
Confidence 3456666666655 5556777765332221 211 25555555 467776554 354 89999999998 44
Q ss_pred ceEEEecCCHHHHHHHHHcCCceeEecccccHHH
Q psy11337 112 CTYVVIGDGQDEEAAAKQRNFPFWRISSRSDLAA 145 (155)
Q Consensus 112 ~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~~ 145 (155)
-.-++|||+..--++|+..||+++-+...+++.+
T Consensus 191 ~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k~ 224 (229)
T 4dcc_A 191 KETFFIDDSEINCKVAQELGISTYTPKAGEDWSH 224 (229)
T ss_dssp GGEEEECSCHHHHHHHHHTTCEEECCCTTCCGGG
T ss_pred HHeEEECCCHHHHHHHHHcCCEEEEECCHHHHHH
Confidence 6678899999999999999999999998776543
No 11
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=97.23 E-value=0.0066 Score=44.40 Aligned_cols=92 Identities=15% Similarity=0.161 Sum_probs=62.6
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccC----hhhHHHHHHHHhCC-CceEEEecC
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIG----KDSCFERIVTRFGR-KCTYVVIGD 119 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~G----KescFerI~~RFG~-k~~yvvIGD 119 (155)
+..+|+.+.++ +..-+++|++.---.-..+=-+|+..+| +.++++-.++ |...|+++.+++|- .-.-++|||
T Consensus 109 ~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD 185 (237)
T 4ex6_A 109 VLEGLDRLSAA-GFRLAMATSKVEKAARAIAELTGLDTRL--TVIAGDDSVERGKPHPDMALHVARGLGIPPERCVVIGD 185 (237)
T ss_dssp HHHHHHHHHHT-TEEEEEECSSCHHHHHHHHHHHTGGGTC--SEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEES
T ss_pred HHHHHHHHHhC-CCcEEEEcCCChHHHHHHHHHcCchhhe--eeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcC
Confidence 34555555443 3444566666432222223345777776 4466655433 67999999999984 467889999
Q ss_pred CHHHHHHHHHcCCceeEecc
Q psy11337 120 GQDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 120 G~eEe~aAk~~~~PFwrI~~ 139 (155)
+..--++|+..|++++-|..
T Consensus 186 ~~~Di~~a~~aG~~~i~v~~ 205 (237)
T 4ex6_A 186 GVPDAEMGRAAGMTVIGVSY 205 (237)
T ss_dssp SHHHHHHHHHTTCEEEEESS
T ss_pred CHHHHHHHHHCCCeEEEEec
Confidence 99999999999999998864
No 12
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=97.22 E-value=0.0012 Score=47.86 Aligned_cols=86 Identities=13% Similarity=0.152 Sum_probs=60.2
Q ss_pred HhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCcccccccc--Ch--hhHHHHHHHHhCCCceEEEecCCHHHH
Q psy11337 49 LTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKI--GK--DSCFERIVTRFGRKCTYVVIGDGQDEE 124 (155)
Q Consensus 49 L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~--GK--escFerI~~RFG~k~~yvvIGDG~eEe 124 (155)
|+.+.++ .--+++|++.---.-..+=-+|+..+| +.++++-.+ +| ...|+++.+++| .-.-++|||+..--
T Consensus 82 l~~l~~~--~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~~~Kp~~~~~~~~~~~~~-~~~~~~vGD~~~Di 156 (201)
T 2w43_A 82 LKEISEI--AEVYALSNGSINEVKQHLERNGLLRYF--KGIFSAESVKEYKPSPKVYKYFLDSIG-AKEAFLVSSNAFDV 156 (201)
T ss_dssp HHHHHHH--SEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGGTCCTTCHHHHHHHHHHHT-CSCCEEEESCHHHH
T ss_pred HHHHHhC--CeEEEEeCcCHHHHHHHHHHCCcHHhC--cEEEehhhcCCCCCCHHHHHHHHHhcC-CCcEEEEeCCHHHh
Confidence 4444444 445677777522222222245676766 457776544 45 899999999999 66778999999999
Q ss_pred HHHHHcCCceeEecc
Q psy11337 125 AAAKQRNFPFWRISS 139 (155)
Q Consensus 125 ~aAk~~~~PFwrI~~ 139 (155)
++|+..|+++.-+..
T Consensus 157 ~~a~~aG~~~~~~~~ 171 (201)
T 2w43_A 157 IGAKNAGMRSIFVNR 171 (201)
T ss_dssp HHHHHTTCEEEEECS
T ss_pred HHHHHCCCEEEEECC
Confidence 999999999887654
No 13
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=97.21 E-value=0.003 Score=45.72 Aligned_cols=92 Identities=15% Similarity=0.130 Sum_probs=64.4
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccC----hhhHHHHHHHHhC-CCceEEEecCC
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIG----KDSCFERIVTRFG-RKCTYVVIGDG 120 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~G----KescFerI~~RFG-~k~~yvvIGDG 120 (155)
..+|+.+. .+..-+++|++.---.-.++--+|+..+| +.++++-.+| |...|+.+.+++| +.-.-++|||+
T Consensus 113 ~~~l~~l~--~g~~~~i~sn~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~ 188 (240)
T 3qnm_A 113 KEVLEYLA--PQYNLYILSNGFRELQSRKMRSAGVDRYF--KKIILSEDLGVLKPRPEIFHFALSATQSELRESLMIGDS 188 (240)
T ss_dssp HHHHHHHT--TTSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEEEEESC
T ss_pred HHHHHHHH--cCCeEEEEeCCchHHHHHHHHHcChHhhc--eeEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEECCC
Confidence 34444444 34556677776433323333345777776 4666665433 5789999999998 55788999999
Q ss_pred H-HHHHHHHHcCCceeEecccc
Q psy11337 121 Q-DEEAAAKQRNFPFWRISSRS 141 (155)
Q Consensus 121 ~-eEe~aAk~~~~PFwrI~~~~ 141 (155)
. ..-++|+..||++.-++...
T Consensus 189 ~~~Di~~a~~aG~~~~~~~~~~ 210 (240)
T 3qnm_A 189 WEADITGAHGVGMHQAFYNVTE 210 (240)
T ss_dssp TTTTHHHHHHTTCEEEEECCSC
T ss_pred chHhHHHHHHcCCeEEEEcCCC
Confidence 5 88999999999999888765
No 14
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=97.21 E-value=0.0022 Score=46.48 Aligned_cols=91 Identities=15% Similarity=0.208 Sum_probs=63.3
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCcccccccc--C--hhhHHHHHHHHhC--CCceEEEec
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKI--G--KDSCFERIVTRFG--RKCTYVVIG 118 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~--G--KescFerI~~RFG--~k~~yvvIG 118 (155)
+...|+.+.++ ..-+++|++.--..-.++--+|+..+| +.++++..+ + |...|+++.+++| +.-.-++||
T Consensus 108 ~~~~l~~l~~~--~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vG 183 (238)
T 3ed5_A 108 AFDLISNLQQQ--FDLYIVTNGVSHTQYKRLRDSGLFPFF--KDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLIIG 183 (238)
T ss_dssp HHHHHHHHHTT--SEEEEEECSCHHHHHHHHHHTTCGGGC--SEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGEEEEE
T ss_pred HHHHHHHHHhc--CeEEEEeCCCHHHHHHHHHHcChHhhh--heEEEecccCCCCCChHHHHHHHHHcCCCChhHeEEEC
Confidence 34555555555 455667776543333333345777777 456665544 3 4789999999999 557789999
Q ss_pred CCH-HHHHHHHHcCCceeEecc
Q psy11337 119 DGQ-DEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 119 DG~-eEe~aAk~~~~PFwrI~~ 139 (155)
|+. .--++|+..|++++-+..
T Consensus 184 D~~~~Di~~a~~aG~~~i~~~~ 205 (238)
T 3ed5_A 184 DSLTADIKGGQLAGLDTCWMNP 205 (238)
T ss_dssp SCTTTTHHHHHHTTCEEEEECT
T ss_pred CCcHHHHHHHHHCCCEEEEECC
Confidence 998 789999999998877765
No 15
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=97.20 E-value=0.0022 Score=47.33 Aligned_cols=92 Identities=14% Similarity=0.188 Sum_probs=64.1
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccC----hhhHHHHHHHHhC-C-CceEEEec
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIG----KDSCFERIVTRFG-R-KCTYVVIG 118 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~G----KescFerI~~RFG-~-k~~yvvIG 118 (155)
+..+|+.+.++ +..-+++|++.---.-.++=-+|+..+|+ .++++-.+| |...|+++.+++| + .-.-++||
T Consensus 115 ~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vG 191 (240)
T 3sd7_A 115 MKEILEMLYKN-GKILLVATSKPTVFAETILRYFDIDRYFK--YIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVG 191 (240)
T ss_dssp HHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCGGGCS--EEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEEEEE
T ss_pred HHHHHHHHHHC-CCeEEEEeCCcHHHHHHHHHHcCcHhhEE--EEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEEEEC
Confidence 34555555554 34455677654222222222356767664 567666554 8899999999998 4 56788999
Q ss_pred CCHHHHHHHHHcCCceeEecc
Q psy11337 119 DGQDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 119 DG~eEe~aAk~~~~PFwrI~~ 139 (155)
|+...-++|+..|++++-|..
T Consensus 192 D~~~Di~~a~~aG~~~i~v~~ 212 (240)
T 3sd7_A 192 DRKYDIIGAKKIGIDSIGVLY 212 (240)
T ss_dssp SSHHHHHHHHHHTCEEEEESS
T ss_pred CCHHHHHHHHHCCCCEEEEeC
Confidence 999999999999999999874
No 16
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=97.16 E-value=0.0034 Score=45.56 Aligned_cols=94 Identities=11% Similarity=0.116 Sum_probs=65.5
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccc-cC--hhhHHHHHHHHhC-CCceEEEecCC
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTK-IG--KDSCFERIVTRFG-RKCTYVVIGDG 120 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k-~G--KescFerI~~RFG-~k~~yvvIGDG 120 (155)
+.++|+.+.++ +.--+++|++.---.-..+=-+|+..+|+.+.|+|+-. .| |...|+++.+++| ..-.-++|||+
T Consensus 75 ~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~~~~~i~iGD~ 153 (205)
T 3m9l_A 75 AVELVRELAGR-GYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRMVMVGDY 153 (205)
T ss_dssp HHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTTCCGGGEEEEESS
T ss_pred HHHHHHHHHhc-CCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCC
Confidence 34555555554 33445677665433333333468888887666776543 23 4679999999998 44678999999
Q ss_pred HHHHHHHHHcCCceeEecc
Q psy11337 121 QDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 121 ~eEe~aAk~~~~PFwrI~~ 139 (155)
...-++|+..|++++-+..
T Consensus 154 ~~Di~~a~~aG~~~i~v~~ 172 (205)
T 3m9l_A 154 RFDLDCGRAAGTRTVLVNL 172 (205)
T ss_dssp HHHHHHHHHHTCEEEECSS
T ss_pred HHHHHHHHHcCCEEEEEeC
Confidence 9999999999998877765
No 17
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=97.12 E-value=0.0061 Score=44.21 Aligned_cols=94 Identities=15% Similarity=0.195 Sum_probs=63.8
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccc--cC--hhhHHHHHHHHhC---CCceEEEe
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTK--IG--KDSCFERIVTRFG---RKCTYVVI 117 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k--~G--KescFerI~~RFG---~k~~yvvI 117 (155)
+...|+.+.++++..-.++|++.--..-.++=-+|+..+|+. -+++.-. .+ +..+|+++.+++| ..-.-++|
T Consensus 98 ~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~-~~~~~~~~~~~k~~~~~~~~~~~~lg~~~~~~~~i~i 176 (234)
T 2hcf_A 98 VRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPF-GAFADDALDRNELPHIALERARRMTGANYSPSQIVII 176 (234)
T ss_dssp HHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSC-EECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGGEEEE
T ss_pred HHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCc-ceecCCCcCccchHHHHHHHHHHHhCCCCCcccEEEE
Confidence 344555555443455567787764333344445688888874 2222221 22 3678999999999 55677999
Q ss_pred cCCHHHHHHHHHcCCceeEecc
Q psy11337 118 GDGQDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 118 GDG~eEe~aAk~~~~PFwrI~~ 139 (155)
||+..--++|+..||+++-|..
T Consensus 177 GD~~~Di~~a~~aG~~~i~v~~ 198 (234)
T 2hcf_A 177 GDTEHDIRCARELDARSIAVAT 198 (234)
T ss_dssp ESSHHHHHHHHTTTCEEEEECC
T ss_pred CCCHHHHHHHHHCCCcEEEEcC
Confidence 9999999999999999887765
No 18
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=97.11 E-value=0.0035 Score=45.86 Aligned_cols=92 Identities=14% Similarity=0.189 Sum_probs=62.9
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccC----hhhHHHHHHHHhC-CCceEEEecCC
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIG----KDSCFERIVTRFG-RKCTYVVIGDG 120 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~G----KescFerI~~RFG-~k~~yvvIGDG 120 (155)
..+|+.+.++ +..-+++|++.--....++-- |+..+|+.+-++++-.++ |...|+++.+++| +.-.-++|||+
T Consensus 114 ~~~l~~l~~~-g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~ 191 (247)
T 3dv9_A 114 LEVLTKIKSE-GLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEALVIENA 191 (247)
T ss_dssp HHHHHHHHHT-TCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGGGEEEEECS
T ss_pred HHHHHHHHHc-CCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChhheEEEeCC
Confidence 3444444443 334456676653322333333 898888655677765443 5688999999998 44667899999
Q ss_pred HHHHHHHHHcCCceeEecc
Q psy11337 121 QDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 121 ~eEe~aAk~~~~PFwrI~~ 139 (155)
..--++|+..||+++-+..
T Consensus 192 ~~Di~~a~~aG~~~i~v~~ 210 (247)
T 3dv9_A 192 PLGVQAGVAAGIFTIAVNT 210 (247)
T ss_dssp HHHHHHHHHTTSEEEEECC
T ss_pred HHHHHHHHHCCCeEEEEcC
Confidence 9999999999999888876
No 19
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=97.10 E-value=0.00036 Score=50.15 Aligned_cols=98 Identities=13% Similarity=0.201 Sum_probs=66.5
Q ss_pred HHHHHHhhhhcCCCceEEEEeCCCch--HHHHHHHHhhcccccccCcccccccc--Ch--hhHHHHHHHHhC-CCceEEE
Q psy11337 44 LAIKCLTLINQRPSCTNVIVITTQLI--PALSKIMLFGLSGIFDVENIYSSTKI--GK--DSCFERIVTRFG-RKCTYVV 116 (155)
Q Consensus 44 ~A~k~L~~i~~r~~~vNVLVTt~qLV--paLaK~LLygL~~~fpieNIYSa~k~--GK--escFerI~~RFG-~k~~yvv 116 (155)
-+.+.|+.+.++ +.--++||++.-- ..+.+- ++|+..+| +.++++..+ +| ...|+++.+++| +.-.-++
T Consensus 95 ~~~~~l~~l~~~-g~~~~i~t~~~~~~~~~~~~~-~~~l~~~f--~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 170 (206)
T 2b0c_A 95 EVIAIMHKLREQ-GHRVVVLSNTNRLHTTFWPEE-YPEIRDAA--DHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVF 170 (206)
T ss_dssp HHHHHHHHHHHT-TCEEEEEECCCCCTTSCCGGG-CHHHHHHC--SEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred cHHHHHHHHHHC-CCeEEEEECCChHHHHHHHHh-ccChhhhe--eeEEEecccCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence 455666666544 3445777775321 111111 14666655 567776543 34 459999999998 4456788
Q ss_pred ecCCHHHHHHHHHcCCceeEecccccHHH
Q psy11337 117 IGDGQDEEAAAKQRNFPFWRISSRSDLAA 145 (155)
Q Consensus 117 IGDG~eEe~aAk~~~~PFwrI~~~~Dl~~ 145 (155)
|||+..--++|+..|+++.-++..+++.+
T Consensus 171 vgD~~~Di~~a~~aG~~~~~~~~~~~~~~ 199 (206)
T 2b0c_A 171 FDDNADNIEGANQLGITSILVKDKTTIPD 199 (206)
T ss_dssp EESCHHHHHHHHTTTCEEEECCSTTHHHH
T ss_pred eCCCHHHHHHHHHcCCeEEEecCCchHHH
Confidence 99999999999999999999998887654
No 20
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=97.10 E-value=0.0038 Score=46.34 Aligned_cols=92 Identities=13% Similarity=0.179 Sum_probs=65.1
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccC----hhhHHHHHHHHhC-CCceEEEecCC
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIG----KDSCFERIVTRFG-RKCTYVVIGDG 120 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~G----KescFerI~~RFG-~k~~yvvIGDG 120 (155)
..+|+.+..+ +.--+++|++.--....++-- ++..+|+.+-++++-.++ |...|+++.+++| +.-.-++|||+
T Consensus 115 ~~~l~~l~~~-g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~ 192 (243)
T 3qxg_A 115 WELLQKVKSE-GLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENA 192 (243)
T ss_dssp HHHHHHHHHT-TCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGGGEEEEECS
T ss_pred HHHHHHHHHc-CCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCC
Confidence 3444444443 344456776654443333334 899998666677765543 5689999999998 44667899999
Q ss_pred HHHHHHHHHcCCceeEecc
Q psy11337 121 QDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 121 ~eEe~aAk~~~~PFwrI~~ 139 (155)
...-++|+..||+++-+..
T Consensus 193 ~~Di~~a~~aG~~~i~v~~ 211 (243)
T 3qxg_A 193 PLGVEAGHKAGIFTIAVNT 211 (243)
T ss_dssp HHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHCCCEEEEEeC
Confidence 9999999999999988865
No 21
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=97.10 E-value=0.0094 Score=43.02 Aligned_cols=91 Identities=16% Similarity=0.122 Sum_probs=63.1
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccC----hhhHHHHHHHHhC-CCceEEEecCC
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIG----KDSCFERIVTRFG-RKCTYVVIGDG 120 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~G----KescFerI~~RFG-~k~~yvvIGDG 120 (155)
..+|+.+.++ +..-+++|++.---.-.++=-+|+..+| +.++++-.++ |...|+++.+++| +.-.-++|||+
T Consensus 97 ~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~ 173 (233)
T 3s6j_A 97 VELLETLDKE-NLKWCIATSGGIDTATINLKALKLDINK--INIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDA 173 (233)
T ss_dssp HHHHHHHHHT-TCCEEEECSSCHHHHHHHHHTTTCCTTS--SCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGEEEEESS
T ss_pred HHHHHHHHHC-CCeEEEEeCCchhhHHHHHHhcchhhhh--heeeccccCCCCCCChHHHHHHHHHhCCCHHHEEEEeCC
Confidence 4444444443 3444667776532222333345777766 4566665544 4899999999998 44678999999
Q ss_pred HHHHHHHHHcCCceeEecc
Q psy11337 121 QDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 121 ~eEe~aAk~~~~PFwrI~~ 139 (155)
..--++|+..||+++-|..
T Consensus 174 ~~Di~~a~~aG~~~i~v~~ 192 (233)
T 3s6j_A 174 IWDMLAARRCKATGVGLLS 192 (233)
T ss_dssp HHHHHHHHHTTCEEEEEGG
T ss_pred HHhHHHHHHCCCEEEEEeC
Confidence 9999999999999998865
No 22
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=97.10 E-value=0.0053 Score=43.30 Aligned_cols=92 Identities=14% Similarity=0.243 Sum_probs=64.8
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccC----hhhHHHHHHHHhC-CCceEEEecC
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIG----KDSCFERIVTRFG-RKCTYVVIGD 119 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~G----KescFerI~~RFG-~k~~yvvIGD 119 (155)
+...|+.+.++ +.--+++|++.--..-.++=-+|+..+|+ .++++-.+| |...|+++.+++| +.-.-++|||
T Consensus 94 ~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD 170 (214)
T 3e58_A 94 VLKVLNEVKSQ-GLEIGLASSSVKADIFRALEENRLQGFFD--IVLSGEEFKESKPNPEIYLTALKQLNVQASRALIIED 170 (214)
T ss_dssp HHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEEEEEC
T ss_pred HHHHHHHHHHC-CCCEEEEeCCcHHHHHHHHHHcCcHhhee--eEeecccccCCCCChHHHHHHHHHcCCChHHeEEEec
Confidence 44555555444 34556778775433333333457777764 566665543 3779999999998 4466789999
Q ss_pred CHHHHHHHHHcCCceeEecc
Q psy11337 120 GQDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 120 G~eEe~aAk~~~~PFwrI~~ 139 (155)
+..--++|+..|++++-+..
T Consensus 171 ~~~Di~~a~~aG~~~~~~~~ 190 (214)
T 3e58_A 171 SEKGIAAGVAADVEVWAIRD 190 (214)
T ss_dssp SHHHHHHHHHTTCEEEEECC
T ss_pred cHhhHHHHHHCCCEEEEECC
Confidence 99999999999999999886
No 23
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=97.04 E-value=0.0058 Score=45.25 Aligned_cols=91 Identities=11% Similarity=0.112 Sum_probs=60.7
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccC----hhhHHHHHHHHhC-CCceEEEecCC
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIG----KDSCFERIVTRFG-RKCTYVVIGDG 120 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~G----KescFerI~~RFG-~k~~yvvIGDG 120 (155)
...|+.+.++ +..-+++|++.-.-.-..+=-+|+..+| +.++++-.+| |...|+++.+++| +.-.-++|||+
T Consensus 111 ~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~ 187 (240)
T 2no4_A 111 AETLEKLKSA-GYIVAILSNGNDEMLQAALKASKLDRVL--DSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVCFVSSN 187 (240)
T ss_dssp HHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEEEEESC
T ss_pred HHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHhcCcHHHc--CEEEEccccCCCCCCHHHHHHHHHHcCCCcccEEEEeCC
Confidence 4445445443 4455667776532222222235677766 4577665543 5679999999998 44566788999
Q ss_pred HHHHHHHHHcCCceeEecc
Q psy11337 121 QDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 121 ~eEe~aAk~~~~PFwrI~~ 139 (155)
..--++|+..|+++.-+..
T Consensus 188 ~~Di~~a~~aG~~~~~v~~ 206 (240)
T 2no4_A 188 AWDLGGAGKFGFNTVRINR 206 (240)
T ss_dssp HHHHHHHHHHTCEEEEECT
T ss_pred HHHHHHHHHCCCEEEEECC
Confidence 9889999999999887754
No 24
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=97.03 E-value=0.0042 Score=49.98 Aligned_cols=95 Identities=13% Similarity=0.177 Sum_probs=71.1
Q ss_pred HHHHHhhhhcCCCceEEEEeCC----CchHHHHHHHHhhcccccccCccccccccC--h--hhHHHHHHHHhCCC-ceEE
Q psy11337 45 AIKCLTLINQRPSCTNVIVITT----QLIPALSKIMLFGLSGIFDVENIYSSTKIG--K--DSCFERIVTRFGRK-CTYV 115 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~----qLVpaLaK~LLygL~~~fpieNIYSa~k~G--K--escFerI~~RFG~k-~~yv 115 (155)
+..+|+.+.++ +.--++||++ .......+-++.+|+.+|. .|+++-.+| | ..+|+.+.+++|-+ -.-+
T Consensus 105 ~~~~L~~L~~~-g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd--~i~~~~~~~~~KP~p~~~~~~~~~lg~~p~~~~ 181 (555)
T 3i28_A 105 MLQAALMLRKK-GFTTAILTNTWLDDRAERDGLAQLMCELKMHFD--FLIESCQVGMVKPEPQIYKFLLDTLKASPSEVV 181 (555)
T ss_dssp HHHHHHHHHHT-TCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSS--EEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred HHHHHHHHHHC-CCEEEEEeCCCccccchhhHHHHHhhhhhhhee--EEEeccccCCCCCCHHHHHHHHHHcCCChhHEE
Confidence 45556555554 4566788987 4556666666679999885 588887655 4 45999999999843 4566
Q ss_pred EecCCHHHHHHHHHcCCceeEeccccc
Q psy11337 116 VIGDGQDEEAAAKQRNFPFWRISSRSD 142 (155)
Q Consensus 116 vIGDG~eEe~aAk~~~~PFwrI~~~~D 142 (155)
+|||....-+||+..||+++-+.....
T Consensus 182 ~v~D~~~di~~a~~aG~~~~~~~~~~~ 208 (555)
T 3i28_A 182 FLDDIGANLKPARDLGMVTILVQDTDT 208 (555)
T ss_dssp EEESCHHHHHHHHHHTCEEEECSSHHH
T ss_pred EECCcHHHHHHHHHcCCEEEEECCCcc
Confidence 679999999999999999999987544
No 25
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=97.02 E-value=0.0037 Score=45.22 Aligned_cols=88 Identities=14% Similarity=0.089 Sum_probs=59.9
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHH-HHHhhcccccccCccccccc--cCh--hhHHHHHHHHhC-CCceEEEecC
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSK-IMLFGLSGIFDVENIYSSTK--IGK--DSCFERIVTRFG-RKCTYVVIGD 119 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK-~LLygL~~~fpieNIYSa~k--~GK--escFerI~~RFG-~k~~yvvIGD 119 (155)
...|+.+.++ .--+++|++.- ..+.+ +=-+|+..+|. .++++.. .+| ...|+++.+++| +.-.-++|||
T Consensus 89 ~~~l~~l~~~--~~~~i~s~~~~-~~~~~~l~~~~l~~~f~--~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~vGD 163 (209)
T 2hdo_A 89 TSLFEQLPSE--LRLGIVTSQRR-NELESGMRSYPFMMRMA--VTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGD 163 (209)
T ss_dssp HHHHHHSCTT--SEEEEECSSCH-HHHHHHHTTSGGGGGEE--EEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEES
T ss_pred HHHHHHHHhc--CcEEEEeCCCH-HHHHHHHHHcChHhhcc--EEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEEECC
Confidence 3444444333 34455666542 22222 22346666664 5676665 468 999999999998 4467789999
Q ss_pred CHHHHHHHHHcCCceeEec
Q psy11337 120 GQDEEAAAKQRNFPFWRIS 138 (155)
Q Consensus 120 G~eEe~aAk~~~~PFwrI~ 138 (155)
+..--++|+..|+++.-+.
T Consensus 164 ~~~Di~~a~~aG~~~~~~~ 182 (209)
T 2hdo_A 164 SVSDEQTAQAANVDFGLAV 182 (209)
T ss_dssp SHHHHHHHHHHTCEEEEEG
T ss_pred ChhhHHHHHHcCCeEEEEc
Confidence 9999999999999999876
No 26
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=97.01 E-value=0.011 Score=43.18 Aligned_cols=94 Identities=11% Similarity=0.113 Sum_probs=59.0
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccC----hhhHHHHHHHHhC-CCceEEEecC
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIG----KDSCFERIVTRFG-RKCTYVVIGD 119 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~G----KescFerI~~RFG-~k~~yvvIGD 119 (155)
+..+|+.+.++ +.--+++|++.-+. ..+=-+|+..+|. .++++-.++ |...|+.+.+++| +.-.-++|||
T Consensus 97 ~~~~l~~l~~~-g~~~~i~t~~~~~~--~~l~~~gl~~~f~--~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~vGD 171 (233)
T 3nas_A 97 IGRLLCQLKNE-NIKIGLASSSRNAP--KILRRLAIIDDFH--AIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAIED 171 (233)
T ss_dssp HHHHHHHHHHT-TCEEEECCSCTTHH--HHHHHTTCTTTCS--EECCC---------CCHHHHHHHHHTSCGGGEEEEEC
T ss_pred HHHHHHHHHHC-CCcEEEEcCchhHH--HHHHHcCcHhhcC--EEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEEEeC
Confidence 34445545443 34456677764422 2222356666664 466665554 3569999999998 4467789999
Q ss_pred CHHHHHHHHHcCCceeEecccccH
Q psy11337 120 GQDEEAAAKQRNFPFWRISSRSDL 143 (155)
Q Consensus 120 G~eEe~aAk~~~~PFwrI~~~~Dl 143 (155)
+..--++|+..||+++-++..+++
T Consensus 172 s~~Di~~a~~aG~~~~~~~~~~~~ 195 (233)
T 3nas_A 172 AEAGISAIKSAGMFAVGVGQGQPM 195 (233)
T ss_dssp SHHHHHHHHHTTCEEEECC-----
T ss_pred CHHHHHHHHHcCCEEEEECCcccc
Confidence 998899999999999998765543
No 27
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=96.98 E-value=0.0073 Score=44.88 Aligned_cols=90 Identities=13% Similarity=0.124 Sum_probs=58.3
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCcccccccc----ChhhHHHHHHHHhCC-CceEEEecCC
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKI----GKDSCFERIVTRFGR-KCTYVVIGDG 120 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~----GKescFerI~~RFG~-k~~yvvIGDG 120 (155)
..+|+.+.++ +.--+++|++.-.-.-..+=-+|+..+| +.++++..+ .|...|+++.+++|- .-.-++|||+
T Consensus 89 ~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~ 165 (222)
T 2nyv_A 89 PYTLEALKSK-GFKLAVVSNKLEELSKKILDILNLSGYF--DLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDT 165 (222)
T ss_dssp HHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTSSCTTCCTTHHHHHHHHHHTCCGGGEEEEESS
T ss_pred HHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHcCCHHHh--eEEEecCcCCCCCCChHHHHHHHHHhCCCchhEEEECCC
Confidence 3344444333 3344567765422122222234665665 567776433 468999999999984 4567899999
Q ss_pred HHHHHHHHHcCCceeEec
Q psy11337 121 QDEEAAAKQRNFPFWRIS 138 (155)
Q Consensus 121 ~eEe~aAk~~~~PFwrI~ 138 (155)
..--++|+..|++++-+.
T Consensus 166 ~~Di~~a~~aG~~~i~v~ 183 (222)
T 2nyv_A 166 DADIEAGKRAGTKTALAL 183 (222)
T ss_dssp HHHHHHHHHHTCEEEEET
T ss_pred HHHHHHHHHCCCeEEEEc
Confidence 999999999999976554
No 28
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=96.97 E-value=0.0049 Score=45.44 Aligned_cols=91 Identities=19% Similarity=0.196 Sum_probs=66.1
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCcccccc--ccChhhHHHHHHHHhC-CCceEEEecCCH
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSST--KIGKDSCFERIVTRFG-RKCTYVVIGDGQ 121 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~--k~GKescFerI~~RFG-~k~~yvvIGDG~ 121 (155)
+...|+.+.+ +.--.++|++.---.-.++=-+||..+|. .|+++- ...|...|+.+.+++| +.-.-++|||+.
T Consensus 89 ~~~~l~~L~~--~~~l~i~T~~~~~~~~~~l~~~gl~~~f~--~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~ 164 (210)
T 2ah5_A 89 IIDLLEELSS--SYPLYITTTKDTSTAQDMAKNLEIHHFFD--GIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTK 164 (210)
T ss_dssp HHHHHHHHHT--TSCEEEEEEEEHHHHHHHHHHTTCGGGCS--EEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSH
T ss_pred HHHHHHHHHc--CCeEEEEeCCCHHHHHHHHHhcCchhhee--eeecCCCCCCCChHHHHHHHHHcCCCcccEEEECCCH
Confidence 4455555544 45556889886544444444568888884 466543 2358899999999998 445679999999
Q ss_pred HHHHHHHHcCCceeEecc
Q psy11337 122 DEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 122 eEe~aAk~~~~PFwrI~~ 139 (155)
.--+||++.||+++-|..
T Consensus 165 ~Di~~a~~aG~~~i~v~~ 182 (210)
T 2ah5_A 165 FDMLGARETGIQKLAITW 182 (210)
T ss_dssp HHHHHHHHHTCEEEEESS
T ss_pred HHHHHHHHCCCcEEEEcC
Confidence 999999999999987764
No 29
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=96.95 E-value=0.0053 Score=44.89 Aligned_cols=94 Identities=19% Similarity=0.102 Sum_probs=61.3
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCcccccccc--C--hhhHHHHHHHHhCCCc--eEEEecC
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKI--G--KDSCFERIVTRFGRKC--TYVVIGD 119 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~--G--KescFerI~~RFG~k~--~yvvIGD 119 (155)
.+.|+.+.++ +.--+++|++.--..-.++=-+|+..+|+ .++++..+ | |...|+++.+++|-+. .-++|||
T Consensus 109 ~~~l~~l~~~-g~~~~i~T~~~~~~~~~~l~~~gl~~~f~--~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v~vGD 185 (231)
T 3kzx_A 109 IELLDTLKEN-NITMAIVSNKNGERLRSEIHHKNLTHYFD--SIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGD 185 (231)
T ss_dssp HHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCGGGCS--EEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEEEEES
T ss_pred HHHHHHHHHC-CCeEEEEECCCHHHHHHHHHHCCchhhee--eEEcccccCCCCCChHHHHHHHHHcCCCcccCEEEEcC
Confidence 3444444443 34445667664333333333456777664 56665443 3 4689999999998543 5789999
Q ss_pred CHHHHHHHHHcCCceeEeccccc
Q psy11337 120 GQDEEAAAKQRNFPFWRISSRSD 142 (155)
Q Consensus 120 G~eEe~aAk~~~~PFwrI~~~~D 142 (155)
+...-++|+..|++++-+....+
T Consensus 186 ~~~Di~~a~~aG~~~v~~~~~~~ 208 (231)
T 3kzx_A 186 SISDIQSAIEAGCLPIKYGSTNI 208 (231)
T ss_dssp SHHHHHHHHHTTCEEEEECC---
T ss_pred CHHHHHHHHHCCCeEEEECCCCC
Confidence 99999999999998888866543
No 30
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=96.94 E-value=0.0096 Score=43.53 Aligned_cols=91 Identities=14% Similarity=0.195 Sum_probs=60.2
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCcccccccc--C--hhhHHHHHHHHhC-CCceEEEecCC
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKI--G--KDSCFERIVTRFG-RKCTYVVIGDG 120 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~--G--KescFerI~~RFG-~k~~yvvIGDG 120 (155)
...|+.+.++ +..-+++|++.-.-.-..+=-+|+..+| +.++++-.+ + |...|+++.+++| +.-.-++|||+
T Consensus 101 ~~~l~~l~~~-g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~ 177 (232)
T 1zrn_A 101 PDSLRELKRR-GLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFVASN 177 (232)
T ss_dssp HHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEEEESC
T ss_pred HHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHhcChHhhh--heEEEecccCCCCCCHHHHHHHHHHcCCCcccEEEEeCC
Confidence 4444444443 4455677777532222222235666666 567766543 3 4569999999998 34556788999
Q ss_pred HHHHHHHHHcCCceeEecc
Q psy11337 121 QDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 121 ~eEe~aAk~~~~PFwrI~~ 139 (155)
..--++|+..|+++.-+..
T Consensus 178 ~~Di~~a~~aG~~~~~~~~ 196 (232)
T 1zrn_A 178 AWDATGARYFGFPTCWINR 196 (232)
T ss_dssp HHHHHHHHHHTCCEEEECT
T ss_pred HHHHHHHHHcCCEEEEEcC
Confidence 9888999999999988754
No 31
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=96.94 E-value=0.0087 Score=41.80 Aligned_cols=90 Identities=12% Similarity=0.129 Sum_probs=60.1
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccc--cCh--hhHHHHHHHHhC-CCceEEEecCC
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTK--IGK--DSCFERIVTRFG-RKCTYVVIGDG 120 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k--~GK--escFerI~~RFG-~k~~yvvIGDG 120 (155)
.++|+.+.++ +..-+++|++.-...- ++-.+++..+| +.++++.. .+| ...|+++.+++| +.-.-++|||+
T Consensus 91 ~~~l~~l~~~-g~~~~i~s~~~~~~~~-~~~~~~~~~~f--~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~~~~iGD~ 166 (207)
T 2go7_A 91 REVLAWADES-GIQQFIYTHKGNNAFT-ILKDLGVESYF--TEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDR 166 (207)
T ss_dssp HHHHHHHHHT-TCEEEEECSSCTHHHH-HHHHHTCGGGE--EEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEEESS
T ss_pred HHHHHHHHHC-CCeEEEEeCCchHHHH-HHHHcCchhhe--eeEEecCcCCCCCCCcHHHHHHHHHhCCCcccEEEECCC
Confidence 3334434332 3444667776543333 33345676666 35555544 346 889999999998 44567899999
Q ss_pred HHHHHHHHHcCCceeEecc
Q psy11337 121 QDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 121 ~eEe~aAk~~~~PFwrI~~ 139 (155)
..--++|+..|+++.-+..
T Consensus 167 ~nDi~~~~~aG~~~i~~~~ 185 (207)
T 2go7_A 167 TLDVEFAQNSGIQSINFLE 185 (207)
T ss_dssp HHHHHHHHHHTCEEEESSC
T ss_pred HHHHHHHHHCCCeEEEEec
Confidence 9999999999999776654
No 32
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.92 E-value=0.0023 Score=45.78 Aligned_cols=89 Identities=15% Similarity=0.162 Sum_probs=61.3
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhC-CCceEEEecCCH-HH
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFG-RKCTYVVIGDGQ-DE 123 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG-~k~~yvvIGDG~-eE 123 (155)
...|+.+..+...--+++|++.--..-.++=-+++..+|. .++++.| .|...|+.+.+++| +.-.-++|||+. .-
T Consensus 111 ~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~--~~~~~~k-pk~~~~~~~~~~lgi~~~~~i~iGD~~~~D 187 (234)
T 3ddh_A 111 KETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD--HIEVMSD-KTEKEYLRLLSILQIAPSELLMVGNSFKSD 187 (234)
T ss_dssp HHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS--EEEEESC-CSHHHHHHHHHHHTCCGGGEEEEESCCCCC
T ss_pred HHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh--eeeecCC-CCHHHHHHHHHHhCCCcceEEEECCCcHHH
Confidence 3444444443224456677665433333333457777664 4666555 68999999999998 446789999996 78
Q ss_pred HHHHHHcCCceeEe
Q psy11337 124 EAAAKQRNFPFWRI 137 (155)
Q Consensus 124 e~aAk~~~~PFwrI 137 (155)
-++|+..|++++-+
T Consensus 188 i~~a~~aG~~~v~v 201 (234)
T 3ddh_A 188 IQPVLSLGGYGVHI 201 (234)
T ss_dssp CHHHHHHTCEEEEC
T ss_pred hHHHHHCCCeEEEe
Confidence 89999999999988
No 33
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=96.91 E-value=0.0071 Score=43.71 Aligned_cols=83 Identities=19% Similarity=0.199 Sum_probs=58.3
Q ss_pred eEEEEeCCCchHHHHHHHHhhcccccccCccccccc------cChhhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcC
Q psy11337 59 TNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTK------IGKDSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRN 131 (155)
Q Consensus 59 vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k------~GKescFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~ 131 (155)
.-+++|++.-...-.++--+++..+|+ +.++++-. ..|...|+++.+++| +.-.-++|||+..--++|+..|
T Consensus 102 ~~~i~s~~~~~~~~~~l~~~~l~~~~~-~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG 180 (229)
T 2fdr_A 102 PRCICSNSSSHRLDMMLTKVGLKPYFA-PHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAG 180 (229)
T ss_dssp CEEEEESSCHHHHHHHHHHTTCGGGTT-TCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTT
T ss_pred CEEEEECCChhHHHHHHHhCChHHhcc-ceEEeccccccCCCCcCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCC
Confidence 456777765432222333357777663 44555433 346789999999998 4466789999999999999999
Q ss_pred CceeEeccccc
Q psy11337 132 FPFWRISSRSD 142 (155)
Q Consensus 132 ~PFwrI~~~~D 142 (155)
+++.-+...++
T Consensus 181 ~~~i~~~~~~~ 191 (229)
T 2fdr_A 181 MRVIGFTGASH 191 (229)
T ss_dssp CEEEEECCSTT
T ss_pred CEEEEEecCCc
Confidence 99888877543
No 34
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=96.91 E-value=0.012 Score=42.55 Aligned_cols=80 Identities=13% Similarity=0.179 Sum_probs=56.9
Q ss_pred ceEEEEeCCCchHHHHHHHHhhcccccccCccccccccC----hhhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCC
Q psy11337 58 CTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIG----KDSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNF 132 (155)
Q Consensus 58 ~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~G----KescFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~ 132 (155)
..-+++|++.--..-.++=-+|+..+| +.++++-.+| |...|+.+.+++| +.-.-++|||+...-++|+..|+
T Consensus 113 ~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~ 190 (230)
T 3um9_A 113 LKTAILSNGSRHSIRQVVGNSGLTNSF--DHLISVDEVRLFKPHQKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGY 190 (230)
T ss_dssp CEEEEEESSCHHHHHHHHHHHTCGGGC--SEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTC
T ss_pred CeEEEEeCCCHHHHHHHHHHCCChhhc--ceeEehhhcccCCCChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCC
Confidence 444567776532222222235676766 4577765543 4789999999998 44667889999989999999999
Q ss_pred ceeEecc
Q psy11337 133 PFWRISS 139 (155)
Q Consensus 133 PFwrI~~ 139 (155)
++.-+..
T Consensus 191 ~~~~~~~ 197 (230)
T 3um9_A 191 PVCWINR 197 (230)
T ss_dssp CEEEECT
T ss_pred EEEEEeC
Confidence 9988754
No 35
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=96.84 E-value=0.0093 Score=43.41 Aligned_cols=86 Identities=17% Similarity=0.216 Sum_probs=63.8
Q ss_pred HHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccC--h--hhHHHHHHHHhCC-CceEEEecCCH
Q psy11337 47 KCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIG--K--DSCFERIVTRFGR-KCTYVVIGDGQ 121 (155)
Q Consensus 47 k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~G--K--escFerI~~RFG~-k~~yvvIGDG~ 121 (155)
.+|+.+.+ .+..-.++|++.--....++--+|+..+|. -++++..+| | ...|+.+.+++|- .-.-++|||..
T Consensus 91 ~~l~~L~~-~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd--~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VgDs~ 167 (216)
T 3kbb_A 91 EALEFVKS-KRIKLALATSTPQREALERLRRLDLEKYFD--VMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDSK 167 (216)
T ss_dssp HHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTTCGGGCS--EEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEEEEECSH
T ss_pred HHHHHHHH-cCCCcccccCCcHHHHHHHHHhcCCCcccc--ccccccccCCCcccHHHHHHHHHhhCCCccceEEEecCH
Confidence 34444433 345567888887777777777889999985 455555444 4 5799999999984 45678899999
Q ss_pred HHHHHHHHcCCcee
Q psy11337 122 DEEAAAKQRNFPFW 135 (155)
Q Consensus 122 eEe~aAk~~~~PFw 135 (155)
.--+||++.||++.
T Consensus 168 ~Di~aA~~aG~~~i 181 (216)
T 3kbb_A 168 SGVEAAKSAGIERI 181 (216)
T ss_dssp HHHHHHHHTTCCCE
T ss_pred HHHHHHHHcCCcEE
Confidence 88899999999984
No 36
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=96.78 E-value=0.012 Score=43.73 Aligned_cols=92 Identities=17% Similarity=0.189 Sum_probs=61.3
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCcccccccc--C--hhhHHHHHHHHhCC-CceEEEecC
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKI--G--KDSCFERIVTRFGR-KCTYVVIGD 119 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~--G--KescFerI~~RFG~-k~~yvvIGD 119 (155)
+..+|+.+.++ +..-+++|++.---.-.++--+|+..+| +.++++-.+ + |...|+++.+++|- .-.-++|||
T Consensus 99 ~~~~l~~l~~~-g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i~iGD 175 (241)
T 2hoq_A 99 ARKVLIRLKEL-GYELGIITDGNPVKQWEKILRLELDDFF--EHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMVGD 175 (241)
T ss_dssp HHHHHHHHHHH-TCEEEEEECSCHHHHHHHHHHTTCGGGC--SEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEEEEES
T ss_pred HHHHHHHHHHC-CCEEEEEECCCchhHHHHHHHcCcHhhc--cEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEEEECC
Confidence 34445544433 3444677876532222333345777776 556666544 3 45899999999984 456789999
Q ss_pred CH-HHHHHHHHcCCceeEecc
Q psy11337 120 GQ-DEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 120 G~-eEe~aAk~~~~PFwrI~~ 139 (155)
+. .--++|+..||++.-+..
T Consensus 176 ~~~~Di~~a~~aG~~~~~v~~ 196 (241)
T 2hoq_A 176 RLYSDIYGAKRVGMKTVWFRY 196 (241)
T ss_dssp CTTTTHHHHHHTTCEEEEECC
T ss_pred CchHhHHHHHHCCCEEEEECC
Confidence 97 578999999999888743
No 37
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=96.77 E-value=0.016 Score=44.33 Aligned_cols=93 Identities=13% Similarity=0.125 Sum_probs=63.6
Q ss_pred HHHHHhhhhcCCCc--eEEEEeCCCchHHHHHHHHhhcccccccCccccccc--------cChhhHHHHHHHHhCCC--c
Q psy11337 45 AIKCLTLINQRPSC--TNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTK--------IGKDSCFERIVTRFGRK--C 112 (155)
Q Consensus 45 A~k~L~~i~~r~~~--vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k--------~GKescFerI~~RFG~k--~ 112 (155)
+..+|+.+.++ +. --+++|++.---.-.++-.+|+..+|. .++++.. ..|..+|+++.+++|-+ -
T Consensus 147 ~~~~L~~L~~~-g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd--~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~ 223 (282)
T 3nuq_A 147 LRNMLLRLRQS-GKIDKLWLFTNAYKNHAIRCLRLLGIADLFD--GLTYCDYSRTDTLVCKPHVKAFEKAMKESGLARYE 223 (282)
T ss_dssp HHHHHHHHHHS-SSCSEEEEECSSCHHHHHHHHHHHTCTTSCS--EEECCCCSSCSSCCCTTSHHHHHHHHHHHTCCCGG
T ss_pred HHHHHHHHHhC-CCCceEEEEECCChHHHHHHHHhCCcccccc--eEEEeccCCCcccCCCcCHHHHHHHHHHcCCCCcc
Confidence 44555555544 33 445677765433333334567777764 4655432 34789999999999954 6
Q ss_pred eEEEecCCHHHHHHHHHcCC-ceeEeccc
Q psy11337 113 TYVVIGDGQDEEAAAKQRNF-PFWRISSR 140 (155)
Q Consensus 113 ~yvvIGDG~eEe~aAk~~~~-PFwrI~~~ 140 (155)
.-++|||+..--++|+..|| ..|-+...
T Consensus 224 ~~i~vGD~~~Di~~a~~aG~~~~~~~~~~ 252 (282)
T 3nuq_A 224 NAYFIDDSGKNIETGIKLGMKTCIHLVEN 252 (282)
T ss_dssp GEEEEESCHHHHHHHHHHTCSEEEEECSC
T ss_pred cEEEEcCCHHHHHHHHHCCCeEEEEEcCC
Confidence 88999999999999999999 67766654
No 38
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=96.76 E-value=0.011 Score=45.70 Aligned_cols=90 Identities=17% Similarity=0.174 Sum_probs=65.0
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCcccccccc--Ch--hhHHHHHHHHhC-CCceEEEecC
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKI--GK--DSCFERIVTRFG-RKCTYVVIGD 119 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~--GK--escFerI~~RFG-~k~~yvvIGD 119 (155)
+..+|+.+.+ +..-++||++.-.-.-.++--+|+..+|. .|+++..+ +| ...|+.+.+++| +.-.-++|||
T Consensus 126 ~~~~L~~L~~--~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~--~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~vGD 201 (260)
T 2gfh_A 126 VKAMLTELRK--EVRLLLLTNGDRQTQREKIEACACQSYFD--AIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGD 201 (260)
T ss_dssp HHHHHHHHHT--TSEEEEEECSCHHHHHHHHHHHTCGGGCS--EEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEEEES
T ss_pred HHHHHHHHHc--CCcEEEEECcChHHHHHHHHhcCHHhhhh--eEEecCCCCCCCCCHHHHHHHHHHcCCChhhEEEECC
Confidence 4555655654 36667888886554455555678888884 56666554 45 569999999998 4467889999
Q ss_pred C-HHHHHHHHHcCC-ceeEec
Q psy11337 120 G-QDEEAAAKQRNF-PFWRIS 138 (155)
Q Consensus 120 G-~eEe~aAk~~~~-PFwrI~ 138 (155)
. ..--++|++.|| +++-+.
T Consensus 202 s~~~Di~~A~~aG~~~~i~v~ 222 (260)
T 2gfh_A 202 TLETDIQGGLNAGLKATVWIN 222 (260)
T ss_dssp CTTTHHHHHHHTTCSEEEEEC
T ss_pred CchhhHHHHHHCCCceEEEEc
Confidence 5 788889999999 665553
No 39
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=96.76 E-value=0.0063 Score=46.45 Aligned_cols=67 Identities=18% Similarity=0.142 Sum_probs=53.0
Q ss_pred HHHHhhcccccccCccccccccC--h--hhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCCceeEeccccc
Q psy11337 74 KIMLFGLSGIFDVENIYSSTKIG--K--DSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPFWRISSRSD 142 (155)
Q Consensus 74 K~LLygL~~~fpieNIYSa~k~G--K--escFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~D 142 (155)
++=-.||..+|. -|+++-.+| | ...|+.+.+++| +.-.-++|||...--+||++.||+++-|.+..+
T Consensus 147 ~L~~~gl~~~Fd--~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~ 218 (250)
T 4gib_A 147 VLNHLGISDKFD--FIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYEN 218 (250)
T ss_dssp HHHHHTCGGGCS--EECCGGGCCSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTTT
T ss_pred Hhhhcccccccc--eeecccccCCCCCcHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChhH
Confidence 333468888884 588877665 4 469999999998 445678899999999999999999998866544
No 40
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=96.72 E-value=0.016 Score=43.10 Aligned_cols=93 Identities=4% Similarity=-0.139 Sum_probs=62.9
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccC----hhhHHHHHHHHhCCC--ceEEEecC
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIG----KDSCFERIVTRFGRK--CTYVVIGD 119 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~G----KescFerI~~RFG~k--~~yvvIGD 119 (155)
..+|+.+.++ +..-+++|++.--..-.++=-+++..+| .+.++|+-.++ |...|+++.+++|-+ -.-++|||
T Consensus 117 ~~~l~~l~~~-g~~~~i~tn~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~vGD 194 (277)
T 3iru_A 117 KEVFDKLIAQ-GIKVGGNTGYGPGMMAPALIAAKEQGYT-PASTVFATDVVRGRPFPDMALKVALELEVGHVNGCIKVDD 194 (277)
T ss_dssp HHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHHHHTTCC-CSEEECGGGSSSCTTSSHHHHHHHHHHTCSCGGGEEEEES
T ss_pred HHHHHHHHHc-CCeEEEEeCCchHHHHHHHHhcCcccCC-CceEecHHhcCCCCCCHHHHHHHHHHcCCCCCccEEEEcC
Confidence 3444444443 3444566766532222333335666652 35666665443 578999999999954 57899999
Q ss_pred CHHHHHHHHHcCCceeEeccc
Q psy11337 120 GQDEEAAAKQRNFPFWRISSR 140 (155)
Q Consensus 120 G~eEe~aAk~~~~PFwrI~~~ 140 (155)
+..--++|+..||+++-|...
T Consensus 195 ~~~Di~~a~~aG~~~v~v~~g 215 (277)
T 3iru_A 195 TLPGIEEGLRAGMWTVGVSCS 215 (277)
T ss_dssp SHHHHHHHHHTTCEEEEECSS
T ss_pred CHHHHHHHHHCCCeEEEEecC
Confidence 999999999999999888765
No 41
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=96.72 E-value=0.011 Score=42.00 Aligned_cols=91 Identities=15% Similarity=0.234 Sum_probs=60.3
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhCC-CceEEEecCCHHH
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFGR-KCTYVVIGDGQDE 123 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG~-k~~yvvIGDG~eE 123 (155)
+.++|+.+.++ +..-++||+..-.-.-..+=-+|+..+|.- ...|...|+++.+++|- .-.-++|||+..-
T Consensus 41 ~~~~l~~l~~~-g~~~~i~T~~~~~~~~~~l~~~gl~~~~~~-------~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~D 112 (162)
T 2p9j_A 41 DGIGIKLLQKM-GITLAVISGRDSAPLITRLKELGVEEIYTG-------SYKKLEIYEKIKEKYSLKDEEIGFIGDDVVD 112 (162)
T ss_dssp HHHHHHHHHTT-TCEEEEEESCCCHHHHHHHHHTTCCEEEEC-------C--CHHHHHHHHHHTTCCGGGEEEEECSGGG
T ss_pred HHHHHHHHHHC-CCEEEEEeCCCcHHHHHHHHHcCCHhhccC-------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHH
Confidence 34555555543 455567777753322222223566666642 34688999999999984 4567899999999
Q ss_pred HHHHHHcCCceeEecccccH
Q psy11337 124 EAAAKQRNFPFWRISSRSDL 143 (155)
Q Consensus 124 e~aAk~~~~PFwrI~~~~Dl 143 (155)
-++|+..++++.-.+..+++
T Consensus 113 i~~a~~ag~~~~~~~~~~~~ 132 (162)
T 2p9j_A 113 IEVMKKVGFPVAVRNAVEEV 132 (162)
T ss_dssp HHHHHHSSEEEECTTSCHHH
T ss_pred HHHHHHCCCeEEecCccHHH
Confidence 99999999998865554443
No 42
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=96.71 E-value=0.013 Score=42.59 Aligned_cols=91 Identities=13% Similarity=0.204 Sum_probs=61.0
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccC----hhhHHHHHHHHhC-CCceEEEecCC
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIG----KDSCFERIVTRFG-RKCTYVVIGDG 120 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~G----KescFerI~~RFG-~k~~yvvIGDG 120 (155)
..+|+.+.++ +.--+++|++.--..-.++=-+|+..+| +.++++-.+| |...|+++.+++| +.-.-++|||+
T Consensus 105 ~~~l~~l~~~-g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~ 181 (233)
T 3umb_A 105 VPVLRQLREM-GLPLGILSNGNPQMLEIAVKSAGMSGLF--DHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQILFVSSN 181 (233)
T ss_dssp HHHHHHHHTT-TCCEEEEESSCHHHHHHHHHTTTCTTTC--SEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEEEEESC
T ss_pred HHHHHHHHhC-CCcEEEEeCCCHHHHHHHHHHCCcHhhc--CEEEEecccCCCCcCHHHHHHHHHHhCCCcccEEEEeCC
Confidence 3444444443 3444677776533222223335777777 4567765543 4569999999998 44677889999
Q ss_pred HHHHHHHHHcCCceeEecc
Q psy11337 121 QDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 121 ~eEe~aAk~~~~PFwrI~~ 139 (155)
...-++|+..|+++.-+..
T Consensus 182 ~~Di~~a~~~G~~~~~v~~ 200 (233)
T 3umb_A 182 GWDACGATWHGFTTFWINR 200 (233)
T ss_dssp HHHHHHHHHHTCEEEEECT
T ss_pred HHHHHHHHHcCCEEEEEcC
Confidence 8888999999999987643
No 43
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=96.71 E-value=0.009 Score=43.21 Aligned_cols=80 Identities=18% Similarity=0.194 Sum_probs=57.1
Q ss_pred ceEEEEeCCCchHHHHHHHHhhcccccccCcccccccc----ChhhHHHHHHHHhCC-CceEEEecCCHHHHHHHHHcCC
Q psy11337 58 CTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKI----GKDSCFERIVTRFGR-KCTYVVIGDGQDEEAAAKQRNF 132 (155)
Q Consensus 58 ~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~----GKescFerI~~RFG~-k~~yvvIGDG~eEe~aAk~~~~ 132 (155)
..-+++|++.--..-..+=-+|+..+|. .++++-.+ .|...|+++.+++|- .-.-++|||+..--++|+..|+
T Consensus 103 ~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~ 180 (226)
T 3mc1_A 103 FHLVVATSKPTVFSKQILEHFKLAFYFD--AIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNL 180 (226)
T ss_dssp CEEEEEEEEEHHHHHHHHHHTTCGGGCS--EEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTC
T ss_pred CeEEEEeCCCHHHHHHHHHHhCCHhhee--eeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCC
Confidence 4455666654322222222456766664 45555544 389999999999984 3688999999999999999999
Q ss_pred ceeEecc
Q psy11337 133 PFWRISS 139 (155)
Q Consensus 133 PFwrI~~ 139 (155)
+++-|..
T Consensus 181 ~~i~v~~ 187 (226)
T 3mc1_A 181 PSIGVTY 187 (226)
T ss_dssp CEEEESS
T ss_pred CEEEEcc
Confidence 9998874
No 44
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=96.70 E-value=0.0068 Score=45.38 Aligned_cols=92 Identities=17% Similarity=0.214 Sum_probs=61.1
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCcccccccc---C--hhhHHHHHHHHhC-CCceEEEecC
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKI---G--KDSCFERIVTRFG-RKCTYVVIGD 119 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~---G--KescFerI~~RFG-~k~~yvvIGD 119 (155)
..+|+.+.++ +.--+++|++.--..-.++=-+|+..+|+. .++++-.+ | |...|+++.+++| +.-.-++|||
T Consensus 116 ~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~-~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD 193 (259)
T 4eek_A 116 AETLRALRAA-GVPFAIGSNSERGRLHLKLRVAGLTELAGE-HIYDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIED 193 (259)
T ss_dssp HHHHHHHHHH-TCCEEEECSSCHHHHHHHHHHTTCHHHHCS-CEECGGGGTTCCTTSSHHHHHHHHHTTCCGGGEEEEES
T ss_pred HHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHhcChHhhccc-eEEeHhhcCcCCCCChHHHHHHHHHcCCCHHHEEEEcC
Confidence 3444444332 344567777654333333334567666652 15555433 3 4789999999998 4467899999
Q ss_pred CHHHHHHHHHcCCceeEecc
Q psy11337 120 GQDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 120 G~eEe~aAk~~~~PFwrI~~ 139 (155)
+...-++|+..||+++-+..
T Consensus 194 ~~~Di~~a~~aG~~~i~v~~ 213 (259)
T 4eek_A 194 SVTGGAAGLAAGATLWGLLV 213 (259)
T ss_dssp SHHHHHHHHHHTCEEEEECC
T ss_pred CHHHHHHHHHCCCEEEEEcc
Confidence 99999999999999888853
No 45
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=96.61 E-value=0.0097 Score=43.12 Aligned_cols=91 Identities=15% Similarity=0.276 Sum_probs=60.6
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCcccccccc----ChhhHHHHHHHHhC-CCceEEEecCC
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKI----GKDSCFERIVTRFG-RKCTYVVIGDG 120 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~----GKescFerI~~RFG-~k~~yvvIGDG 120 (155)
...|+.+.++ .--+++|++.---.-.++=-+|+..+|. .++++-.+ .|...|+++.+++| +.-.-++|||+
T Consensus 106 ~~~l~~l~~~--~~~~i~t~~~~~~~~~~l~~~~~~~~f~--~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~ 181 (234)
T 3u26_A 106 VEVLKSLKGK--YHVGMITDSDTEQAMAFLDALGIKDLFD--SITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVGDN 181 (234)
T ss_dssp HHHHHHHTTT--SEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEEEESC
T ss_pred HHHHHHHHhC--CcEEEEECCCHHHHHHHHHHcCcHHHcc--eeEeccccCCCCcCHHHHHHHHHHcCCCchhEEEEcCC
Confidence 3444445444 4445666665432223333456777664 56665432 35678999999998 45778999999
Q ss_pred H-HHHHHHHHcCCceeEeccc
Q psy11337 121 Q-DEEAAAKQRNFPFWRISSR 140 (155)
Q Consensus 121 ~-eEe~aAk~~~~PFwrI~~~ 140 (155)
. -.-++|+..||+++-+...
T Consensus 182 ~~~Di~~a~~aG~~~~~v~~~ 202 (234)
T 3u26_A 182 PVKDCGGSKNLGMTSILLDRK 202 (234)
T ss_dssp TTTTHHHHHTTTCEEEEECSS
T ss_pred cHHHHHHHHHcCCEEEEECCC
Confidence 7 6789999999999887553
No 46
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=96.58 E-value=0.001 Score=49.37 Aligned_cols=88 Identities=17% Similarity=0.183 Sum_probs=57.2
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCcccccccc--Ch--hhHHHHHHHHhCCCceEEEecCCH
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKI--GK--DSCFERIVTRFGRKCTYVVIGDGQ 121 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~--GK--escFerI~~RFG~k~~yvvIGDG~ 121 (155)
..+|+.+.++ +..-++||++.- ..-.++=-+|+..+| +.|+++..+ +| ...|+.+.+++|-+. ++|||+.
T Consensus 101 ~~~l~~l~~~-g~~~~i~Tn~~~-~~~~~l~~~gl~~~f--~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~--~~vgD~~ 174 (220)
T 2zg6_A 101 LEFLEGLKSN-GYKLALVSNASP-RVKTLLEKFDLKKYF--DALALSYEIKAVKPNPKIFGFALAKVGYPA--VHVGDIY 174 (220)
T ss_dssp HHHHHHHHTT-TCEEEECCSCHH-HHHHHHHHHTCGGGC--SEEC-----------CCHHHHHHHHHCSSE--EEEESSC
T ss_pred HHHHHHHHHC-CCEEEEEeCCcH-HHHHHHHhcCcHhHe--eEEEeccccCCCCCCHHHHHHHHHHcCCCe--EEEcCCc
Confidence 4444444433 445567777642 222223345777777 568877665 35 459999999999776 9999998
Q ss_pred H-HHHHHHHcCCceeEecc
Q psy11337 122 D-EEAAAKQRNFPFWRISS 139 (155)
Q Consensus 122 e-Ee~aAk~~~~PFwrI~~ 139 (155)
. --++|++.||+++-+..
T Consensus 175 ~~Di~~a~~aG~~~i~v~~ 193 (220)
T 2zg6_A 175 ELDYIGAKRSYVDPILLDR 193 (220)
T ss_dssp CCCCCCSSSCSEEEEEBCT
T ss_pred hHhHHHHHHCCCeEEEECC
Confidence 8 88899999999988864
No 47
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=96.55 E-value=0.0086 Score=44.75 Aligned_cols=89 Identities=17% Similarity=0.202 Sum_probs=62.6
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhC-CCceEEEecCCH-HH
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFG-RKCTYVVIGDGQ-DE 123 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG-~k~~yvvIGDG~-eE 123 (155)
..+|+.+. .+.--+++|++.---.-.++--+|+..+| +.|+++.| .+...|+.+.+++| +.-.-++|||+. .-
T Consensus 118 ~~~l~~l~--~~~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~i~~~~k-p~~~~~~~~~~~l~~~~~~~i~iGD~~~~D 192 (251)
T 2pke_A 118 REAVAAIA--ADYAVVLITKGDLFHQEQKIEQSGLSDLF--PRIEVVSE-KDPQTYARVLSEFDLPAERFVMIGNSLRSD 192 (251)
T ss_dssp HHHHHHHH--TTSEEEEEEESCHHHHHHHHHHHSGGGTC--CCEEEESC-CSHHHHHHHHHHHTCCGGGEEEEESCCCCC
T ss_pred HHHHHHHH--CCCEEEEEeCCCHHHHHHHHHHcCcHHhC--ceeeeeCC-CCHHHHHHHHHHhCcCchhEEEECCCchhh
Confidence 44455554 33455677776543333344446777776 46777554 46789999999998 446789999998 78
Q ss_pred HHHHHHcCCceeEecc
Q psy11337 124 EAAAKQRNFPFWRISS 139 (155)
Q Consensus 124 e~aAk~~~~PFwrI~~ 139 (155)
-++|+..|+++.-|..
T Consensus 193 i~~a~~aG~~~~~v~~ 208 (251)
T 2pke_A 193 VEPVLAIGGWGIYTPY 208 (251)
T ss_dssp CHHHHHTTCEEEECCC
T ss_pred HHHHHHCCCEEEEECC
Confidence 8899999999988843
No 48
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=96.53 E-value=0.015 Score=41.56 Aligned_cols=92 Identities=17% Similarity=0.199 Sum_probs=60.2
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCcccccccc--Ch--hhHHHHHHHHhC-CCceEEEecCC
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKI--GK--DSCFERIVTRFG-RKCTYVVIGDG 120 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~--GK--escFerI~~RFG-~k~~yvvIGDG 120 (155)
...|+.+.++ +..-+++|++..+....+ -+++..+|. .++++-.+ +| ...|+.+.+++| +.-.-++|||+
T Consensus 97 ~~~l~~l~~~-g~~~~i~t~~~~~~~~l~--~~~l~~~f~--~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~ 171 (221)
T 2wf7_A 97 LQLLKDLRSN-KIKIALASASKNGPFLLE--RMNLTGYFD--AIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDS 171 (221)
T ss_dssp HHHHHHHHHT-TCEEEECCCCTTHHHHHH--HTTCGGGCS--EECCTTTSSSCTTSSHHHHHHHHHTTCCGGGEEEEESS
T ss_pred HHHHHHHHHC-CCeEEEEcCcHHHHHHHH--HcChHHHcc--eEeccccCCCCCCChHHHHHHHHHcCCChhHeEEEeCC
Confidence 3444444332 344456666633332222 246666663 45555433 34 459999999998 44677899999
Q ss_pred HHHHHHHHHcCCceeEeccccc
Q psy11337 121 QDEEAAAKQRNFPFWRISSRSD 142 (155)
Q Consensus 121 ~eEe~aAk~~~~PFwrI~~~~D 142 (155)
..--++|+..|+++.-++.+++
T Consensus 172 ~nDi~~a~~aG~~~~~~~~~~~ 193 (221)
T 2wf7_A 172 QAGIQAIKDSGALPIGVGRPED 193 (221)
T ss_dssp HHHHHHHHHHTCEEEEESCHHH
T ss_pred HHHHHHHHHCCCEEEEECCHHH
Confidence 9999999999999998876544
No 49
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=96.53 E-value=0.007 Score=43.91 Aligned_cols=95 Identities=11% Similarity=0.146 Sum_probs=59.8
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCchHHHHHH-HHhhcccccc--c---Ccc-ccccccChhhHHHHHHHHhC-CCceEEE
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLIPALSKI-MLFGLSGIFD--V---ENI-YSSTKIGKDSCFERIVTRFG-RKCTYVV 116 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~-LLygL~~~fp--i---eNI-YSa~k~GKescFerI~~RFG-~k~~yvv 116 (155)
+...|+.+.++ .--++||++. -+.+.++ =-+|+..+|. + ++. +...|.+|...|.++.+++| ..-.-++
T Consensus 74 ~~~~l~~l~~~--~~~~i~s~~~-~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~~~~~~~ 150 (206)
T 1rku_A 74 AVEFVDWLRER--FQVVILSDTF-YEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIA 150 (206)
T ss_dssp HHHHHHHHHTT--SEEEEEEEEE-HHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHhc--CcEEEEECCh-HHHHHHHHHHcCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHhcCCEEEE
Confidence 34555555555 4455667663 2222222 2347777774 1 121 22223477789999999997 4457789
Q ss_pred ecCCHHHHHHHHHcCCceeEecccccH
Q psy11337 117 IGDGQDEEAAAKQRNFPFWRISSRSDL 143 (155)
Q Consensus 117 IGDG~eEe~aAk~~~~PFwrI~~~~Dl 143 (155)
|||+..--++|+..|++++- ..++++
T Consensus 151 iGD~~~Di~~a~~aG~~~~~-~~~~~~ 176 (206)
T 1rku_A 151 AGDSYNDTTMLSEAHAGILF-HAPENV 176 (206)
T ss_dssp EECSSTTHHHHHHSSEEEEE-SCCHHH
T ss_pred EeCChhhHHHHHhcCccEEE-CCcHHH
Confidence 99999999999999999883 444443
No 50
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=96.49 E-value=0.029 Score=39.95 Aligned_cols=92 Identities=15% Similarity=0.200 Sum_probs=59.9
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccc--cCh--hhHHHHHHHHhC-CCceEEEecCC
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTK--IGK--DSCFERIVTRFG-RKCTYVVIGDG 120 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k--~GK--escFerI~~RFG-~k~~yvvIGDG 120 (155)
...|+.+.++ +..-+++|++.--..-..+=-+++..+| +.++++.. .+| ...|+++.+++| ..-.-++|||+
T Consensus 100 ~~~l~~l~~~-g~~~~i~t~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~iGD~ 176 (226)
T 1te2_A 100 REAVALCKEQ-GLLVGLASASPLHMLEKVLTMFDLRDSF--DALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDS 176 (226)
T ss_dssp HHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEESS
T ss_pred HHHHHHHHHC-CCcEEEEeCCcHHHHHHHHHhcCcHhhC--cEEEeccccCCCCCChHHHHHHHHHcCCCHHHeEEEeCC
Confidence 4444444433 3334567776522111112223555555 55666544 346 889999999998 44677899999
Q ss_pred HHHHHHHHHcCCceeEeccc
Q psy11337 121 QDEEAAAKQRNFPFWRISSR 140 (155)
Q Consensus 121 ~eEe~aAk~~~~PFwrI~~~ 140 (155)
..--++|+..|+++.-+...
T Consensus 177 ~nDi~~a~~aG~~~~~~~~~ 196 (226)
T 1te2_A 177 VNGMIASKAARMRSIVVPAP 196 (226)
T ss_dssp HHHHHHHHHTTCEEEECCCT
T ss_pred HHHHHHHHHcCCEEEEEcCC
Confidence 99999999999999886553
No 51
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=96.47 E-value=0.013 Score=43.65 Aligned_cols=91 Identities=12% Similarity=0.163 Sum_probs=62.4
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHH--hhcccccccCcccccc--cc--C--hhhHHHHHHHHhCCC---ceE
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIML--FGLSGIFDVENIYSST--KI--G--KDSCFERIVTRFGRK---CTY 114 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LL--ygL~~~fpieNIYSa~--k~--G--KescFerI~~RFG~k---~~y 114 (155)
..+|+.+.++ +..-+++|++.- ..+...|. +++..+|+ .++++- .+ + |...|+.+.+++|-+ -.-
T Consensus 118 ~~~l~~l~~~-g~~~~i~sn~~~-~~~~~~l~~~~~l~~~f~--~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~~ 193 (250)
T 3l5k_A 118 EKLIIHLRKH-GIPFALATSSRS-ASFDMKTSRHKEFFSLFS--HIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAMEKC 193 (250)
T ss_dssp HHHHHHHHHT-TCCEEEECSCCH-HHHHHHTTTCHHHHTTSS--CEECTTCTTCCSCTTSTHHHHHHHHTSSSCCCGGGE
T ss_pred HHHHHHHHhC-CCcEEEEeCCCH-HHHHHHHHhccCHHhhee--eEEecchhhccCCCCChHHHHHHHHHcCCCCCcceE
Confidence 3444444443 344456676653 33333332 57777775 566555 33 3 467999999999954 788
Q ss_pred EEecCCHHHHHHHHHcCCceeEeccc
Q psy11337 115 VVIGDGQDEEAAAKQRNFPFWRISSR 140 (155)
Q Consensus 115 vvIGDG~eEe~aAk~~~~PFwrI~~~ 140 (155)
++|||+...-++|+..||+++-|...
T Consensus 194 i~iGD~~~Di~~a~~aG~~~i~v~~~ 219 (250)
T 3l5k_A 194 LVFEDAPNGVEAALAAGMQVVMVPDG 219 (250)
T ss_dssp EEEESSHHHHHHHHHTTCEEEECCCT
T ss_pred EEEeCCHHHHHHHHHcCCEEEEEcCC
Confidence 99999999999999999999988763
No 52
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=96.46 E-value=0.013 Score=42.14 Aligned_cols=92 Identities=14% Similarity=0.244 Sum_probs=61.0
Q ss_pred HHHHHhhhhcCCCceEEEEeCCC---chHHHHHHHHhhcccccccCcccccccc----ChhhHHHHHHHHhC-CCceEEE
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQ---LIPALSKIMLFGLSGIFDVENIYSSTKI----GKDSCFERIVTRFG-RKCTYVV 116 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~q---LVpaLaK~LLygL~~~fpieNIYSa~k~----GKescFerI~~RFG-~k~~yvv 116 (155)
+.++|+.+.++ +..-+++|++. --..-.++--+++..+| +.++++-.+ .+...|+.+.+++| +.-.-++
T Consensus 104 ~~~~l~~l~~~-g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~ 180 (235)
T 2om6_A 104 TKEALQFVKER-GLKTAVIGNVMFWPGSYTRLLLERFGLMEFI--DKTFFADEVLSYKPRKEMFEKVLNSFEVKPEESLH 180 (235)
T ss_dssp HHHHHHHHHHT-TCEEEEEECCCSSCHHHHHHHHHHTTCGGGC--SEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGGEEE
T ss_pred HHHHHHHHHHC-CCEEEEEcCCcccchhHHHHHHHhCCcHHHh--hhheeccccCCCCCCHHHHHHHHHHcCCCccceEE
Confidence 45555555544 34446778876 22222223335666666 456655433 35789999999998 4567889
Q ss_pred ecCCH-HHHHHHHHcCCceeEecc
Q psy11337 117 IGDGQ-DEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 117 IGDG~-eEe~aAk~~~~PFwrI~~ 139 (155)
|||+. .--++|+..|+++.-+..
T Consensus 181 iGD~~~nDi~~a~~aG~~~~~~~~ 204 (235)
T 2om6_A 181 IGDTYAEDYQGARKVGMWAVWINQ 204 (235)
T ss_dssp EESCTTTTHHHHHHTTSEEEEECT
T ss_pred ECCChHHHHHHHHHCCCEEEEECC
Confidence 99998 578899999999877643
No 53
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=96.43 E-value=0.032 Score=47.97 Aligned_cols=97 Identities=13% Similarity=0.132 Sum_probs=71.7
Q ss_pred HHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCcccccccc-------------Ch--hhHHHHHHH
Q psy11337 42 LSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKI-------------GK--DSCFERIVT 106 (155)
Q Consensus 42 Ls~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~-------------GK--escFerI~~ 106 (155)
..-+..+|+.+.++ ++-=.+||++.--..-.++=-+||..+|..+.|+|+..+ || ..+|..+.+
T Consensus 217 ~pGv~elL~~Lk~~-Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~~a~~ 295 (384)
T 1qyi_A 217 VDEVKVLLNDLKGA-GFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALY 295 (384)
T ss_dssp HHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHH
T ss_pred CcCHHHHHHHHHhC-CCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHHHHHHH
Confidence 34456666666555 456678888865444444445688898874478886653 55 568999999
Q ss_pred HhC---------------CCceEEEecCCHHHHHHHHHcCCceeEecc
Q psy11337 107 RFG---------------RKCTYVVIGDGQDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 107 RFG---------------~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~ 139 (155)
++| +.-.-++|||+..--+||++.||+++-|..
T Consensus 296 ~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~ 343 (384)
T 1qyi_A 296 GNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLT 343 (384)
T ss_dssp CCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESC
T ss_pred HcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 998 345678999999999999999999988865
No 54
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=96.36 E-value=0.022 Score=41.88 Aligned_cols=87 Identities=3% Similarity=-0.106 Sum_probs=58.1
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCcccccccc----ChhhHHHHHHHHhC-CCceEEEecCC
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKI----GKDSCFERIVTRFG-RKCTYVVIGDG 120 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~----GKescFerI~~RFG-~k~~yvvIGDG 120 (155)
...|..+.++ ..-+++|++.- +. +.-++=.++-. .+.++++-.+ .|...|+.+.+++| +.-.-++|||+
T Consensus 126 ~~~l~~l~~~--~~~~i~s~~~~-~~-~~~~l~~~g~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~ 199 (254)
T 3umc_A 126 LAGMHALKAD--YWLAALSNGNT-AL-MLDVARHAGLP--WDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEVMLCAAH 199 (254)
T ss_dssp HHHHHHHTTT--SEEEECCSSCH-HH-HHHHHHHHTCC--CSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEESC
T ss_pred HHHHHHHHhc--CeEEEEeCCCH-HH-HHHHHHHcCCC--cceEEeecccccCCCCHHHHHHHHHHcCCChHHEEEEcCc
Confidence 3444444443 44566666542 22 22222223322 5667776433 37899999999998 44678999999
Q ss_pred HHHHHHHHHcCCceeEec
Q psy11337 121 QDEEAAAKQRNFPFWRIS 138 (155)
Q Consensus 121 ~eEe~aAk~~~~PFwrI~ 138 (155)
...-++|+..||++.-+.
T Consensus 200 ~~Di~~a~~aG~~~~~~~ 217 (254)
T 3umc_A 200 NYDLKAARALGLKTAFIA 217 (254)
T ss_dssp HHHHHHHHHTTCEEEEEC
T ss_pred hHhHHHHHHCCCeEEEEe
Confidence 999999999999999887
No 55
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=96.31 E-value=0.034 Score=41.92 Aligned_cols=92 Identities=14% Similarity=0.251 Sum_probs=60.2
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccC----hhhHHHHHHHHhC-CCceEEEecC
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIG----KDSCFERIVTRFG-RKCTYVVIGD 119 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~G----KescFerI~~RFG-~k~~yvvIGD 119 (155)
+...|+.+.++ +..-+++|++.---.-..+=-+|+..+| +.++++...+ |...|+++.+++| ..-.-++|||
T Consensus 119 ~~~~l~~l~~~-g~~~~i~t~~~~~~~~~~l~~~gl~~~f--~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD 195 (243)
T 2hsz_A 119 VKETLEALKAQ-GYILAVVTNKPTKHVQPILTAFGIDHLF--SEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGD 195 (243)
T ss_dssp HHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEES
T ss_pred HHHHHHHHHHC-CCEEEEEECCcHHHHHHHHHHcCchheE--EEEEecccCCCCCcCHHHHHHHHHHhCcChhhEEEEcC
Confidence 34444444433 3444577776532222222234666666 4566655433 4569999999998 4467789999
Q ss_pred CHHHHHHHHHcCCceeEecc
Q psy11337 120 GQDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 120 G~eEe~aAk~~~~PFwrI~~ 139 (155)
+..--++|+..++++.-|..
T Consensus 196 ~~~Di~~a~~aG~~~i~v~~ 215 (243)
T 2hsz_A 196 SQNDIFAAHSAGCAVVGLTY 215 (243)
T ss_dssp SHHHHHHHHHHTCEEEEESS
T ss_pred CHHHHHHHHHCCCeEEEEcC
Confidence 99999999999999887754
No 56
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=96.28 E-value=0.0096 Score=43.76 Aligned_cols=93 Identities=13% Similarity=0.192 Sum_probs=59.6
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhccc--cccc------Cccccccc--------cChhhHHHHHHHHh
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSG--IFDV------ENIYSSTK--------IGKDSCFERIVTRF 108 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~--~fpi------eNIYSa~k--------~GKescFerI~~RF 108 (155)
+..+|+.+.++ +.--++||++.-.-.-..+=-+|+.. +|.. +.+|++.. .+|...|+++.+++
T Consensus 91 ~~~~l~~L~~~-g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~ 169 (225)
T 1nnl_A 91 IRELVSRLQER-NVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKF 169 (225)
T ss_dssp HHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC-CCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHHHHHHHHc
Confidence 44555555544 45556778775433323333456653 4432 22233322 37999999999999
Q ss_pred CCCceEEEecCCHHHHHHHHHcCCceeEeccc
Q psy11337 109 GRKCTYVVIGDGQDEEAAAKQRNFPFWRISSR 140 (155)
Q Consensus 109 G~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~ 140 (155)
|. -.-++|||+..--++|++.++ .+-+...
T Consensus 170 ~~-~~~~~vGDs~~Di~~a~~ag~-~i~~~~~ 199 (225)
T 1nnl_A 170 HF-KKIIMIGDGATDMEACPPADA-FIGFGGN 199 (225)
T ss_dssp CC-SCEEEEESSHHHHTTTTTSSE-EEEECSS
T ss_pred CC-CcEEEEeCcHHhHHHHHhCCe-EEEecCc
Confidence 96 457899999999999999999 6666543
No 57
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=96.22 E-value=0.015 Score=43.52 Aligned_cols=78 Identities=10% Similarity=0.138 Sum_probs=54.7
Q ss_pred CceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCCcee
Q psy11337 57 SCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPFW 135 (155)
Q Consensus 57 ~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PFw 135 (155)
+..-+++|+..--.+-..+=-+|+..+|+. . .+|...++++.+++| +.-.-++|||+.---++|++.++++.
T Consensus 62 g~~~~i~T~~~~~~~~~~~~~lgl~~~f~~------~-~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~ 134 (189)
T 3mn1_A 62 GVTTAIISGRKTAIVERRAKSLGIEHLFQG------R-EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMA 134 (189)
T ss_dssp TCEEEEECSSCCHHHHHHHHHHTCSEEECS------C-SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred CCEEEEEECcChHHHHHHHHHcCCHHHhcC------c-CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEE
Confidence 344466777654333333333566666653 2 789999999999998 34567889999999999999999986
Q ss_pred Eecccc
Q psy11337 136 RISSRS 141 (155)
Q Consensus 136 rI~~~~ 141 (155)
-.+..+
T Consensus 135 ~~~~~~ 140 (189)
T 3mn1_A 135 VANAAS 140 (189)
T ss_dssp CTTSCH
T ss_pred eCCccH
Confidence 544443
No 58
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=96.18 E-value=0.035 Score=43.37 Aligned_cols=87 Identities=14% Similarity=0.200 Sum_probs=61.4
Q ss_pred HHHhhhhcCCCceEEEEeCCCchHHHHHHHH-----hhcccccccCcccccccc-Chh--hHHHHHHHHhC-CCceEEEe
Q psy11337 47 KCLTLINQRPSCTNVIVITTQLIPALSKIML-----FGLSGIFDVENIYSSTKI-GKD--SCFERIVTRFG-RKCTYVVI 117 (155)
Q Consensus 47 k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LL-----ygL~~~fpieNIYSa~k~-GKe--scFerI~~RFG-~k~~yvvI 117 (155)
.+|+.+.++ +..-.++|++.-. .++.+| .||..+|. .|+++ .+ +|. ..|+.+.+++| +.-.-++|
T Consensus 137 ~~L~~L~~~-g~~~~i~Tn~~~~--~~~~~l~~~~~~~l~~~fd--~i~~~-~~~~KP~p~~~~~~~~~lg~~p~~~l~V 210 (261)
T 1yns_A 137 PAVRKWREA-GMKVYIYSSGSVE--AQKLLFGHSTEGDILELVD--GHFDT-KIGHKVESESYRKIADSIGCSTNNILFL 210 (261)
T ss_dssp HHHHHHHHT-TCEEEEECSSCHH--HHHHHHHTBTTBCCGGGCS--EEECG-GGCCTTCHHHHHHHHHHHTSCGGGEEEE
T ss_pred HHHHHHHhC-CCeEEEEeCCCHH--HHHHHHHhhcccChHhhcc--EEEec-CCCCCCCHHHHHHHHHHhCcCcccEEEE
Confidence 344444332 4455678888643 333332 35777774 57776 44 575 89999999998 44678999
Q ss_pred cCCHHHHHHHHHcCCceeEecc
Q psy11337 118 GDGQDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 118 GDG~eEe~aAk~~~~PFwrI~~ 139 (155)
||....-+||++.||+.+-+..
T Consensus 211 gDs~~di~aA~~aG~~~i~v~~ 232 (261)
T 1yns_A 211 TDVTREASAAEEADVHVAVVVR 232 (261)
T ss_dssp ESCHHHHHHHHHTTCEEEEECC
T ss_pred cCCHHHHHHHHHCCCEEEEEeC
Confidence 9999999999999999988853
No 59
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=96.13 E-value=0.026 Score=43.10 Aligned_cols=92 Identities=11% Similarity=0.098 Sum_probs=63.3
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccC----hhhHHHHHHHHhC-CCceEEEecCC
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIG----KDSCFERIVTRFG-RKCTYVVIGDG 120 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~G----KescFerI~~RFG-~k~~yvvIGDG 120 (155)
..+|+.+.++ +..-+++|++.- ..-..+=-+|+..+| +.++++..+| +...|+.+.+++| +.-.-++|||+
T Consensus 112 ~~~l~~l~~~-g~~~~i~tn~~~-~~~~~l~~~gl~~~f--~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~ 187 (263)
T 3k1z_A 112 EDTLRECRTR-GLRLAVISNFDR-RLEGILGGLGLREHF--DFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAHVGDN 187 (263)
T ss_dssp HHHHHHHHHT-TCEEEEEESCCT-THHHHHHHTTCGGGC--SCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGEEEEESC
T ss_pred HHHHHHHHhC-CCcEEEEeCCcH-HHHHHHHhCCcHHhh--hEEEeecccCCCCCCHHHHHHHHHHcCCCHHHEEEECCC
Confidence 3444444444 455567787653 222222335666666 5677775543 4689999999998 55678999999
Q ss_pred H-HHHHHHHHcCCceeEecccc
Q psy11337 121 Q-DEEAAAKQRNFPFWRISSRS 141 (155)
Q Consensus 121 ~-eEe~aAk~~~~PFwrI~~~~ 141 (155)
. ..-++|+..||++.-+....
T Consensus 188 ~~~Di~~a~~aG~~~i~~~~~~ 209 (263)
T 3k1z_A 188 YLCDYQGPRAVGMHSFLVVGPQ 209 (263)
T ss_dssp HHHHTHHHHTTTCEEEEECCSS
T ss_pred cHHHHHHHHHCCCEEEEEcCCC
Confidence 7 77899999999999987753
No 60
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=96.13 E-value=0.027 Score=41.00 Aligned_cols=86 Identities=14% Similarity=-0.009 Sum_probs=57.3
Q ss_pred HHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccC----hhhHHHHHHHHhC-CCceEEEecCCH
Q psy11337 47 KCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIG----KDSCFERIVTRFG-RKCTYVVIGDGQ 121 (155)
Q Consensus 47 k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~G----KescFerI~~RFG-~k~~yvvIGDG~ 121 (155)
.+|+.+.++ ..-+++|++.- ..++-++=.++-. .+.++|+-.++ |...|+.+.+++| +.-.-++|||+.
T Consensus 123 ~~l~~l~~~--~~~~i~t~~~~--~~~~~~l~~~~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~ 196 (254)
T 3umg_A 123 PGLTAIKAE--YIIGPLSNGNT--SLLLDMAKNAGIP--WDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEVMLAAAHN 196 (254)
T ss_dssp HHHHHHHHH--SEEEECSSSCH--HHHHHHHHHHTCC--CSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGEEEEESCH
T ss_pred HHHHHHHhC--CeEEEEeCCCH--HHHHHHHHhCCCC--eeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHEEEEeCCh
Confidence 344444442 44456666542 2222223223322 46677765433 5789999999998 557789999999
Q ss_pred HHHHHHHHcCCceeEec
Q psy11337 122 DEEAAAKQRNFPFWRIS 138 (155)
Q Consensus 122 eEe~aAk~~~~PFwrI~ 138 (155)
..-++|+..|+++.-+.
T Consensus 197 ~Di~~a~~aG~~~~~~~ 213 (254)
T 3umg_A 197 GDLEAAHATGLATAFIL 213 (254)
T ss_dssp HHHHHHHHTTCEEEEEC
T ss_pred HhHHHHHHCCCEEEEEe
Confidence 99999999999999886
No 61
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=96.12 E-value=0.01 Score=43.05 Aligned_cols=85 Identities=18% Similarity=0.221 Sum_probs=60.2
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccC----hhhHHHHHHHHhC-CCceEEEecCC
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIG----KDSCFERIVTRFG-RKCTYVVIGDG 120 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~G----KescFerI~~RFG-~k~~yvvIGDG 120 (155)
..+|+.+.++ ..-+++|++.-. +=-.|+..+|+ .++++..+| |...|+.+.+++| +.-.-++|||+
T Consensus 111 ~~~l~~l~~~--~~~~i~t~~~~~-----l~~~~l~~~f~--~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~ 181 (230)
T 3vay_A 111 QPTLEILAKT--FTLGVITNGNAD-----VRRLGLADYFA--FALCAEDLGIGKPDPAPFLEALRRAKVDASAAVHVGDH 181 (230)
T ss_dssp HHHHHHHHTT--SEEEEEESSCCC-----GGGSTTGGGCS--EEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEESC
T ss_pred HHHHHHHHhC--CeEEEEECCchh-----hhhcCcHHHee--eeEEccccCCCCcCHHHHHHHHHHhCCCchheEEEeCC
Confidence 4445555554 566777877654 22346666664 566664433 4789999999998 44677899999
Q ss_pred H-HHHHHHHHcCCceeEecc
Q psy11337 121 Q-DEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 121 ~-eEe~aAk~~~~PFwrI~~ 139 (155)
. ..-++|+..|+++.-+..
T Consensus 182 ~~~Di~~a~~aG~~~~~v~~ 201 (230)
T 3vay_A 182 PSDDIAGAQQAGMRAIWYNP 201 (230)
T ss_dssp TTTTHHHHHHTTCEEEEECT
T ss_pred hHHHHHHHHHCCCEEEEEcC
Confidence 7 788999999999988754
No 62
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=96.09 E-value=0.041 Score=39.44 Aligned_cols=94 Identities=15% Similarity=0.212 Sum_probs=61.7
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCch-----H--------HHHHHHHhhcccccccCcccc-----cc--ccC--hhhHHH
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLI-----P--------ALSKIMLFGLSGIFDVENIYS-----ST--KIG--KDSCFE 102 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLV-----p--------aLaK~LLygL~~~fpieNIYS-----a~--k~G--KescFe 102 (155)
+..+|+.+.++ +..-+++|++.-+ + ..+.-+|=.+| .+++.+|+ +- ..+ +...|+
T Consensus 32 ~~~~l~~L~~~-g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~~~~~~~~~KP~~~~~~ 108 (179)
T 3l8h_A 32 SLQAIARLTQA-DWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG--GVVDAIFMCPHGPDDGCACRKPLPGMYR 108 (179)
T ss_dssp HHHHHHHHHHT-TCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT--CCCCEEEEECCCTTSCCSSSTTSSHHHH
T ss_pred HHHHHHHHHHC-CCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC--CceeEEEEcCCCCCCCCCCCCCCHHHHH
Confidence 44555555443 5667788887632 1 22333344444 23344442 22 223 467999
Q ss_pred HHHHHhC-CCceEEEecCCHHHHHHHHHcCCceeEecccc
Q psy11337 103 RIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPFWRISSRS 141 (155)
Q Consensus 103 rI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~ 141 (155)
++.+++| +.-.-++|||+..--++|++.||+++-|....
T Consensus 109 ~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~ 148 (179)
T 3l8h_A 109 DIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGN 148 (179)
T ss_dssp HHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTT
T ss_pred HHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCC
Confidence 9999998 44667899999999999999999999987643
No 63
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=96.04 E-value=0.037 Score=41.38 Aligned_cols=91 Identities=11% Similarity=0.062 Sum_probs=60.2
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCcccccccc----ChhhHHHHHHHHhC-CCceEEEecC
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKI----GKDSCFERIVTRFG-RKCTYVVIGD 119 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~----GKescFerI~~RFG-~k~~yvvIGD 119 (155)
+...|+.+.++ +.--.++|++.-...-.++=-+|+. +| +.|+|+..+ .|...|+.+.+++| +.-.-++|||
T Consensus 115 ~~~~l~~l~~~-g~~~~i~t~~~~~~~~~~l~~~~l~-~f--~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGD 190 (240)
T 2hi0_A 115 ILDLMKNLRQK-GVKLAVVSNKPNEAVQVLVEELFPG-SF--DFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGD 190 (240)
T ss_dssp HHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHHSTT-TC--SEEEEECTTSCCTTSSHHHHHHHHHHTCCGGGEEEEES
T ss_pred HHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHcCCc-ce--eEEEecCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcC
Confidence 34444444433 2333477776432222222234555 55 567776543 36789999999998 4567899999
Q ss_pred CHHHHHHHHHcCCceeEecc
Q psy11337 120 GQDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 120 G~eEe~aAk~~~~PFwrI~~ 139 (155)
+..--++|+..|++++-+..
T Consensus 191 s~~Di~~a~~aG~~~v~v~~ 210 (240)
T 2hi0_A 191 SEIDIQTARNSEMDEIAVNW 210 (240)
T ss_dssp SHHHHHHHHHTTCEEEEESS
T ss_pred CHHHHHHHHHCCCeEEEECC
Confidence 99999999999999887764
No 64
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=96.03 E-value=0.013 Score=43.49 Aligned_cols=79 Identities=8% Similarity=0.099 Sum_probs=54.8
Q ss_pred CceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhCCC-ceEEEecCCHHHHHHHHHcCCcee
Q psy11337 57 SCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFGRK-CTYVVIGDGQDEEAAAKQRNFPFW 135 (155)
Q Consensus 57 ~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG~k-~~yvvIGDG~eEe~aAk~~~~PFw 135 (155)
+..-++||+..-...-..+=-+|+..+|+. ...|...|+++.+++|-+ -.-++|||+..--++|+..++++.
T Consensus 69 g~~v~ivT~~~~~~~~~~l~~lgl~~~~~~-------~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~ 141 (188)
T 2r8e_A 69 DIEVAIITGRKAKLVEDRCATLGITHLYQG-------QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVA 141 (188)
T ss_dssp TCEEEEECSSCCHHHHHHHHHHTCCEEECS-------CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEE
T ss_pred CCeEEEEeCCChHHHHHHHHHcCCceeecC-------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEE
Confidence 445567777653322222223466655543 367899999999999843 567899999999999999999997
Q ss_pred Eeccccc
Q psy11337 136 RISSRSD 142 (155)
Q Consensus 136 rI~~~~D 142 (155)
-.+.++.
T Consensus 142 ~~~~~~~ 148 (188)
T 2r8e_A 142 VADAHPL 148 (188)
T ss_dssp CTTSCTT
T ss_pred ecCcCHH
Confidence 6554443
No 65
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=96.03 E-value=0.044 Score=38.95 Aligned_cols=91 Identities=16% Similarity=0.157 Sum_probs=57.4
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCcccccccc----ChhhHHHHHHHHhCC-CceEEEecCC
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKI----GKDSCFERIVTRFGR-KCTYVVIGDG 120 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~----GKescFerI~~RFG~-k~~yvvIGDG 120 (155)
...++.+.++ +..-+++|++.---.-.++--+++..+| +.++++-.+ .|...|+++.+++|- .-.-++|||+
T Consensus 95 ~~~l~~l~~~-g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~i~iGD~ 171 (225)
T 3d6j_A 95 LPTLTHLKKQ-GIRIGIISTKYRFRILSFLRNHMPDDWF--DIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLYIGDS 171 (225)
T ss_dssp HHHHHHHHHH-TCEEEEECSSCHHHHHHHHHTSSCTTCC--SEEECGGGCSSCTTSTHHHHHHHHHTTCCGGGEEEEESS
T ss_pred HHHHHHHHHC-CCeEEEEECCCHHHHHHHHHHcCchhhe--eeeeehhhcCCCCCChHHHHHHHHHhCCChHHeEEEcCC
Confidence 3444444332 2334566766432222222234555544 556655332 345899999999984 4667899999
Q ss_pred HHHHHHHHHcCCceeEecc
Q psy11337 121 QDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 121 ~eEe~aAk~~~~PFwrI~~ 139 (155)
..--++|+..|+++.-+..
T Consensus 172 ~nDi~~~~~aG~~~~~~~~ 190 (225)
T 3d6j_A 172 TVDAGTAAAAGVSFTGVTS 190 (225)
T ss_dssp HHHHHHHHHHTCEEEEETT
T ss_pred HHHHHHHHHCCCeEEEECC
Confidence 9999999999999988654
No 66
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=96.03 E-value=0.018 Score=41.51 Aligned_cols=95 Identities=14% Similarity=0.131 Sum_probs=62.0
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccc--------------cccChhhHHHHHHHHhCC
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSS--------------TKIGKDSCFERIVTRFGR 110 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa--------------~k~GKescFerI~~RFG~ 110 (155)
+...|+.+.++ +..-+++|++.-...-.++=-+|+..+|.. +++. ....|...|+++.+++|-
T Consensus 80 ~~~~l~~l~~~-g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~--~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~~~~g~ 156 (217)
T 3m1y_A 80 ALELVSALKEK-NYKVVCFSGGFDLATNHYRDLLHLDAAFSN--TLIVENDALNGLVTGHMMFSHSKGEMLLVLQRLLNI 156 (217)
T ss_dssp HHHHHHHHHTT-TEEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEETTEEEEEEEESCCSTTHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHC-CCEEEEEcCCchhHHHHHHHHcCcchhccc--eeEEeCCEEEeeeccCCCCCCChHHHHHHHHHHcCC
Confidence 34444444433 345566777644333333334577777653 3211 134589999999999983
Q ss_pred -CceEEEecCCHHHHHHHHHcCCceeEecccccH
Q psy11337 111 -KCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDL 143 (155)
Q Consensus 111 -k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl 143 (155)
.-.-++|||+..--++|+..++++.- +..+.+
T Consensus 157 ~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~~~~l 189 (217)
T 3m1y_A 157 SKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVL 189 (217)
T ss_dssp CSTTEEEEECSGGGHHHHTTCSEEEEE-SCCHHH
T ss_pred CHhHEEEEeCCHHHHHHHHHCCCeEEE-CccHHH
Confidence 45678999999999999999999865 555444
No 67
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=96.02 E-value=0.04 Score=41.88 Aligned_cols=90 Identities=13% Similarity=0.126 Sum_probs=63.7
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccC--h--hhHHHHHHHHhCC-CceEEEecC
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIG--K--DSCFERIVTRFGR-KCTYVVIGD 119 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~G--K--escFerI~~RFG~-k~~yvvIGD 119 (155)
+..+|+.+.++ +..-.++|++.-...+ +=-.|+..+|+ -|+++..+| | ...|..+.+++|- .-.-++|||
T Consensus 100 ~~~ll~~L~~~-g~~i~i~t~~~~~~~~--l~~~gl~~~fd--~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VgD 174 (243)
T 4g9b_A 100 IRSLLADLRAQ-QISVGLASVSLNAPTI--LAALELREFFT--FCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIED 174 (243)
T ss_dssp HHHHHHHHHHT-TCEEEECCCCTTHHHH--HHHTTCGGGCS--EECCGGGCSSCTTSTHHHHHHHHHHTSCGGGEEEEES
T ss_pred HHHHHHhhhcc-cccceecccccchhhh--hhhhhhccccc--cccccccccCCCCcHHHHHHHHHHcCCChHHEEEEcC
Confidence 34445545444 3444566766544433 33468888875 477776655 4 5799999999994 456788999
Q ss_pred CHHHHHHHHHcCCceeEecc
Q psy11337 120 GQDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 120 G~eEe~aAk~~~~PFwrI~~ 139 (155)
...--+||++.||+.+-|..
T Consensus 175 s~~di~aA~~aG~~~I~V~~ 194 (243)
T 4g9b_A 175 AQAGIDAINASGMRSVGIGA 194 (243)
T ss_dssp SHHHHHHHHHHTCEEEEEST
T ss_pred CHHHHHHHHHcCCEEEEECC
Confidence 99999999999999998864
No 68
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=96.02 E-value=0.014 Score=41.58 Aligned_cols=78 Identities=14% Similarity=0.077 Sum_probs=53.6
Q ss_pred CceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCCcee
Q psy11337 57 SCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPFW 135 (155)
Q Consensus 57 ~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PFw 135 (155)
+..-+++|+..--.+-..+=-+|+..+|.. . ..|...|+++.+++| +.-.-++|||+..--++|+..++++.
T Consensus 47 g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~------~-kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~ 119 (164)
T 3e8m_A 47 GIPVGILTGEKTEIVRRRAEKLKVDYLFQG------V-VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGV 119 (164)
T ss_dssp TCCEEEECSSCCHHHHHHHHHTTCSEEECS------C-SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEEC
T ss_pred CCEEEEEeCCChHHHHHHHHHcCCCEeecc------c-CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEE
Confidence 344566776643222222223455544433 2 579999999999998 44567899999999999999999988
Q ss_pred Eecccc
Q psy11337 136 RISSRS 141 (155)
Q Consensus 136 rI~~~~ 141 (155)
-.+..+
T Consensus 120 ~~~~~~ 125 (164)
T 3e8m_A 120 PASAPF 125 (164)
T ss_dssp CTTSCH
T ss_pred cCChHH
Confidence 755444
No 69
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=96.00 E-value=0.042 Score=40.38 Aligned_cols=88 Identities=13% Similarity=0.075 Sum_probs=59.0
Q ss_pred HHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhCC-CceEEEecCCHHHHH
Q psy11337 47 KCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFGR-KCTYVVIGDGQDEEA 125 (155)
Q Consensus 47 k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG~-k~~yvvIGDG~eEe~ 125 (155)
.+|+.+.++ +..-+++|+..---.-..+=-+|+..+|. ....|...|+++.+++|- .-.-++|||+...-+
T Consensus 42 ~~l~~L~~~-G~~~~i~Tg~~~~~~~~~~~~lgl~~~~~-------~~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~ 113 (180)
T 1k1e_A 42 LGIKMLMDA-DIQVAVLSGRDSPILRRRIADLGIKLFFL-------GKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLP 113 (180)
T ss_dssp HHHHHHHHT-TCEEEEEESCCCHHHHHHHHHHTCCEEEE-------SCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred HHHHHHHHC-CCeEEEEeCCCcHHHHHHHHHcCCceeec-------CCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 344444443 34456677665433322233456666663 236799999999999983 355789999999999
Q ss_pred HHHHcCCceeEeccccc
Q psy11337 126 AAKQRNFPFWRISSRSD 142 (155)
Q Consensus 126 aAk~~~~PFwrI~~~~D 142 (155)
+|+..++++.-.+.++.
T Consensus 114 ~~~~ag~~~~~~~~~~~ 130 (180)
T 1k1e_A 114 AFAACGTSFAVADAPIY 130 (180)
T ss_dssp HHHHSSEEEECTTSCHH
T ss_pred HHHHcCCeEEeCCccHH
Confidence 99999999986554443
No 70
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=95.90 E-value=0.021 Score=42.27 Aligned_cols=100 Identities=13% Similarity=0.120 Sum_probs=61.1
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCc-------------hHHHHHHHHhhcccccccCccc-c----ccccC----hhhHHH
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQL-------------IPALSKIMLFGLSGIFDVENIY-S----STKIG----KDSCFE 102 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qL-------------VpaLaK~LLygL~~~fpieNIY-S----a~k~G----KescFe 102 (155)
+..+|+.+.++ +..-++||++.- ....+.-+|=.++-. .+.|| | +..+| +...|+
T Consensus 47 ~~e~L~~L~~~-G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~~~~~~~~KP~p~~~~ 123 (176)
T 2fpr_A 47 VIPQLLKLQKA-GYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADECDCRKPKVKLVE 123 (176)
T ss_dssp HHHHHHHHHHT-TEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCCSSSTTSCGGGG
T ss_pred HHHHHHHHHHC-CCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCCcccccccCCCHHHHH
Confidence 44455555443 456678888731 233344444334322 56665 4 13332 568999
Q ss_pred HHHHHhC-CCceEEEecCCHHHHHHHHHcCCceeEecccc-cHHHHH
Q psy11337 103 RIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPFWRISSRS-DLAALY 147 (155)
Q Consensus 103 rI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~-Dl~~L~ 147 (155)
.+.+++| +.-.-++|||....-++|++.||+++-+.... ++..+.
T Consensus 124 ~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~~~~~~~~~ 170 (176)
T 2fpr_A 124 RYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRETLNWPMIG 170 (176)
T ss_dssp GGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTTBCHHHHH
T ss_pred HHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCCcccHHHHH
Confidence 9999998 34567899999999999999999999998764 355443
No 71
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=95.79 E-value=0.039 Score=39.62 Aligned_cols=88 Identities=16% Similarity=0.210 Sum_probs=59.6
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccC--h--hhHHHHH---HHHhC-CCceEEEe
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIG--K--DSCFERI---VTRFG-RKCTYVVI 117 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~G--K--escFerI---~~RFG-~k~~yvvI 117 (155)
..+|+.+.+ +..-+++|++.- ..++-.+=.|+.+| +.|+++..+| | ...|+.+ .+++| +.-.-++|
T Consensus 105 ~~~l~~l~~--~~~~~i~tn~~~--~~~~~~l~~l~~~f--d~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~~~~~~v 178 (240)
T 3smv_A 105 VEALQYLKK--HYKLVILSNIDR--NEFKLSNAKLGVEF--DHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKKDILHT 178 (240)
T ss_dssp HHHHHHHHH--HSEEEEEESSCH--HHHHHHHTTTCSCC--SEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred HHHHHHHHh--CCeEEEEeCCCh--hHHHHHHHhcCCcc--CEEEEccccCCCCCCHHHHHHHHHHHHhcCCCchhEEEE
Confidence 344555544 355567777653 23333344477766 5677776544 3 4577777 88998 44677899
Q ss_pred cCCH-HHHHHHHHcCCceeEecc
Q psy11337 118 GDGQ-DEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 118 GDG~-eEe~aAk~~~~PFwrI~~ 139 (155)
||+. .--++|+..||++.-+..
T Consensus 179 GD~~~~Di~~a~~aG~~~~~~~~ 201 (240)
T 3smv_A 179 AESLYHDHIPANDAGLVSAWIYR 201 (240)
T ss_dssp ESCTTTTHHHHHHHTCEEEEECT
T ss_pred CCCchhhhHHHHHcCCeEEEEcC
Confidence 9996 889999999999988764
No 72
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=95.54 E-value=0.17 Score=38.92 Aligned_cols=95 Identities=17% Similarity=0.124 Sum_probs=63.0
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCcccccccc----ChhhHHHHHHHHhCC--------Cc
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKI----GKDSCFERIVTRFGR--------KC 112 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~----GKescFerI~~RFG~--------k~ 112 (155)
+..+|+.+.++++..-+++|++.---.-.++=-+++.. .+-++++..+ .|...|+++.+++|- .-
T Consensus 119 ~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~---f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~~~~ 195 (275)
T 2qlt_A 119 AVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR---PEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQDPSKS 195 (275)
T ss_dssp HHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC---CSSEECGGGCSSCTTSSHHHHHHHHHTTCCCCSSCGGGS
T ss_pred HHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc---cCEEEEcccCCCCCCChHHHHHHHHHcCCCccccCCCcc
Confidence 34555555444345557778765322222222345542 3456665433 367899999999985 46
Q ss_pred eEEEecCCHHHHHHHHHcCCceeEeccccc
Q psy11337 113 TYVVIGDGQDEEAAAKQRNFPFWRISSRSD 142 (155)
Q Consensus 113 ~yvvIGDG~eEe~aAk~~~~PFwrI~~~~D 142 (155)
.-++|||+..--++|+..|++++-|.....
T Consensus 196 ~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~ 225 (275)
T 2qlt_A 196 KVVVFEDAPAGIAAGKAAGCKIVGIATTFD 225 (275)
T ss_dssp CEEEEESSHHHHHHHHHTTCEEEEESSSSC
T ss_pred eEEEEeCCHHHHHHHHHcCCEEEEECCCCC
Confidence 789999999999999999999999876433
No 73
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=95.50 E-value=0.1 Score=39.24 Aligned_cols=45 Identities=13% Similarity=0.075 Sum_probs=37.6
Q ss_pred cCh--hhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCCce-eEecc
Q psy11337 95 IGK--DSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPF-WRISS 139 (155)
Q Consensus 95 ~GK--escFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PF-wrI~~ 139 (155)
.+| ...|+++.+++| ..-.-++|||+...-++|++.||++ +-+..
T Consensus 129 ~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~ 177 (211)
T 2gmw_A 129 CRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRT 177 (211)
T ss_dssp SSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESS
T ss_pred CCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEec
Confidence 455 679999999998 4456689999998899999999999 77754
No 74
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=95.42 E-value=0.048 Score=40.66 Aligned_cols=90 Identities=17% Similarity=0.137 Sum_probs=61.4
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhCCCceEEEecCCHH--
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFGRKCTYVVIGDGQD-- 122 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG~k~~yvvIGDG~e-- 122 (155)
+...|+.+.++. .-++||++.-.-.-.++=-+|+..+|.. +.. ...+|...|+.+.+.. +.-.-++|||+..
T Consensus 101 ~~~~l~~l~~~g--~~~i~Tn~~~~~~~~~l~~~gl~~~f~~--~~~-~~~~K~~~~~~~~~~~-~~~~~~~vgDs~~d~ 174 (231)
T 2p11_A 101 ALNALRHLGARG--PTVILSDGDVVFQPRKIARSGLWDEVEG--RVL-IYIHKELMLDQVMECY-PARHYVMVDDKLRIL 174 (231)
T ss_dssp HHHHHHHHHTTS--CEEEEEECCSSHHHHHHHHTTHHHHTTT--CEE-EESSGGGCHHHHHHHS-CCSEEEEECSCHHHH
T ss_pred HHHHHHHHHhCC--CEEEEeCCCHHHHHHHHHHcCcHHhcCe--eEE-ecCChHHHHHHHHhcC-CCceEEEEcCccchh
Confidence 455566665554 4578898865544444555677777743 222 2357888888888733 3346789999987
Q ss_pred -HHHHHHHcCCceeEeccc
Q psy11337 123 -EEAAAKQRNFPFWRISSR 140 (155)
Q Consensus 123 -Ee~aAk~~~~PFwrI~~~ 140 (155)
--+||+..||+++-+...
T Consensus 175 ~di~~A~~aG~~~i~v~~g 193 (231)
T 2p11_A 175 AAMKKAWGARLTTVFPRQG 193 (231)
T ss_dssp HHHHHHHGGGEEEEEECCS
T ss_pred hhhHHHHHcCCeEEEeCCC
Confidence 668999999999888763
No 75
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=95.40 E-value=0.062 Score=39.66 Aligned_cols=78 Identities=13% Similarity=0.119 Sum_probs=52.8
Q ss_pred CceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCCcee
Q psy11337 57 SCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPFW 135 (155)
Q Consensus 57 ~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PFw 135 (155)
+..-+++|+..--.+-.-+=-+|+. +| ... ..|...++++.+++| ..-.-++|||+.---++|+..++++.
T Consensus 55 g~~~~i~T~~~~~~~~~~~~~lgi~-~~------~~~-~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~ 126 (176)
T 3mmz_A 55 GLTMLILSTEQNPVVAARARKLKIP-VL------HGI-DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVA 126 (176)
T ss_dssp TCEEEEEESSCCHHHHHHHHHHTCC-EE------ESC-SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred CCeEEEEECcChHHHHHHHHHcCCe-eE------eCC-CChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEE
Confidence 3445677766543222222224444 33 332 789999999999998 34557889999999999999999987
Q ss_pred Eeccccc
Q psy11337 136 RISSRSD 142 (155)
Q Consensus 136 rI~~~~D 142 (155)
-.+..+.
T Consensus 127 ~~~~~~~ 133 (176)
T 3mmz_A 127 VASAHDV 133 (176)
T ss_dssp CTTCCHH
T ss_pred CCChhHH
Confidence 6554443
No 76
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=95.30 E-value=0.18 Score=37.61 Aligned_cols=90 Identities=8% Similarity=0.018 Sum_probs=58.2
Q ss_pred HHHhhhhcCCCceEEEEeCCCc--hHHHHHHHHhhcccccccCccccccc----cChhhHHHHHHHHhCCC--ceEEEec
Q psy11337 47 KCLTLINQRPSCTNVIVITTQL--IPALSKIMLFGLSGIFDVENIYSSTK----IGKDSCFERIVTRFGRK--CTYVVIG 118 (155)
Q Consensus 47 k~L~~i~~r~~~vNVLVTt~qL--VpaLaK~LLygL~~~fpieNIYSa~k----~GKescFerI~~RFG~k--~~yvvIG 118 (155)
..|+.+.++ +..-+++|++.- +..+.+ -+++..+|. +.++++-. ..|...|+++.+++|-+ -.-++||
T Consensus 110 ~~l~~l~~~-g~~~~i~t~~~~~~~~~~l~--~~~~~~~~~-~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~iG 185 (267)
T 1swv_A 110 EVIASLRER-GIKIGSTTGYTREMMDIVAK--EAALQGYKP-DFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVG 185 (267)
T ss_dssp HHHHHHHHT-TCEEEEBCSSCHHHHHHHHH--HHHHTTCCC-SCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEEEEE
T ss_pred HHHHHHHHc-CCeEEEEcCCCHHHHHHHHH--HcCCcccCh-HheecCCccCCCCCCHHHHHHHHHHhCCCCCcCEEEEe
Confidence 334444332 334456666542 222222 235666542 44554432 34788999999999944 4789999
Q ss_pred CCHHHHHHHHHcCCceeEeccc
Q psy11337 119 DGQDEEAAAKQRNFPFWRISSR 140 (155)
Q Consensus 119 DG~eEe~aAk~~~~PFwrI~~~ 140 (155)
|+..--++|+..|++++-|...
T Consensus 186 D~~nDi~~a~~aG~~~i~v~~~ 207 (267)
T 1swv_A 186 DTVSDMKEGRNAGMWTVGVILG 207 (267)
T ss_dssp SSHHHHHHHHHTTSEEEEECTT
T ss_pred CCHHHHHHHHHCCCEEEEEcCC
Confidence 9999999999999999888753
No 77
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=95.08 E-value=0.07 Score=40.07 Aligned_cols=77 Identities=14% Similarity=0.219 Sum_probs=53.2
Q ss_pred CceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhCC-CceEEEecCCHHHHHHHHHcCCcee
Q psy11337 57 SCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFGR-KCTYVVIGDGQDEEAAAKQRNFPFW 135 (155)
Q Consensus 57 ~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG~-k~~yvvIGDG~eEe~aAk~~~~PFw 135 (155)
+.--++||+..--..-..+=-+|+..+|. .. ..|...|+++.+++|- .-.-++|||+..--++|+..++++.
T Consensus 62 g~~~~ivTn~~~~~~~~~l~~lgl~~~~~------~~-kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~ 134 (191)
T 3n1u_A 62 GIQVAIITTAQNAVVDHRMEQLGITHYYK------GQ-VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVA 134 (191)
T ss_dssp TCEEEEECSCCSHHHHHHHHHHTCCEEEC------SC-SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred CCeEEEEeCcChHHHHHHHHHcCCcccee------CC-CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEE
Confidence 34456777765433333333345555444 33 4789999999999984 4567899999999999999999985
Q ss_pred Eeccc
Q psy11337 136 RISSR 140 (155)
Q Consensus 136 rI~~~ 140 (155)
-.+..
T Consensus 135 ~~~~~ 139 (191)
T 3n1u_A 135 VSNAV 139 (191)
T ss_dssp CTTCC
T ss_pred eCCcc
Confidence 43333
No 78
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=94.88 E-value=0.48 Score=34.58 Aligned_cols=101 Identities=13% Similarity=0.115 Sum_probs=60.2
Q ss_pred HHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhccccccc-----Ccccc-------ccccChhhHHHHHHHHhC-
Q psy11337 43 SLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDV-----ENIYS-------STKIGKDSCFERIVTRFG- 109 (155)
Q Consensus 43 s~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpi-----eNIYS-------a~k~GKescFerI~~RFG- 109 (155)
.-+...|+...++ +.-=++||++.-...-..+=-+|+..+|.. +.+|. ....+|...++++.++.|
T Consensus 95 ~g~~~~l~~l~~~-g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~~~~ 173 (232)
T 3fvv_A 95 VQAVDVVRGHLAA-GDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGMGL 173 (232)
T ss_dssp HHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHHcCC
Confidence 3345555555444 344567776653222222223466654432 11121 112458888999999998
Q ss_pred --C-CceEEEecCCHHHHHHHHHcCCceeEecccccHHH
Q psy11337 110 --R-KCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDLAA 145 (155)
Q Consensus 110 --~-k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~~ 145 (155)
- .-.-++|||+.---.+|+..++|++- ..++.+.+
T Consensus 174 ~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~-~~~~~l~~ 211 (232)
T 3fvv_A 174 ALGDFAESYFYSDSVNDVPLLEAVTRPIAA-NPSPGLRE 211 (232)
T ss_dssp CGGGSSEEEEEECCGGGHHHHHHSSEEEEE-SCCHHHHH
T ss_pred CcCchhheEEEeCCHhhHHHHHhCCCeEEE-CcCHHHHH
Confidence 2 34567899999999999999999864 44444443
No 79
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=94.83 E-value=0.086 Score=43.24 Aligned_cols=97 Identities=12% Similarity=0.157 Sum_probs=63.3
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccC-----ccc-----cc--cccChhhHHHHHHHHhC-CC
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVE-----NIY-----SS--TKIGKDSCFERIVTRFG-RK 111 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpie-----NIY-----Sa--~k~GKescFerI~~RFG-~k 111 (155)
+..+|+.+.++ +.--++||++.-.-+-..+=-+|+..+|... ..+ +. ....|..+|+++.+++| ..
T Consensus 184 ~~e~L~~Lk~~-G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~~lgv~~ 262 (317)
T 4eze_A 184 LLTILPVIKAK-GFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAARLNIAT 262 (317)
T ss_dssp HHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHHHTCCG
T ss_pred HHHHHHHHHhC-CCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHHHcCCCc
Confidence 34445545443 4556778877644444444446777777522 111 11 11368899999999998 44
Q ss_pred ceEEEecCCHHHHHHHHHcCCceeEecccccH
Q psy11337 112 CTYVVIGDGQDEEAAAKQRNFPFWRISSRSDL 143 (155)
Q Consensus 112 ~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl 143 (155)
-.-++|||+..--.+|+..++++.- ...+.+
T Consensus 263 ~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~ 293 (317)
T 4eze_A 263 ENIIACGDGANDLPMLEHAGTGIAW-KAKPVV 293 (317)
T ss_dssp GGEEEEECSGGGHHHHHHSSEEEEE-SCCHHH
T ss_pred ceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHH
Confidence 6678899999999999999999876 444433
No 80
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=94.66 E-value=0.074 Score=44.27 Aligned_cols=95 Identities=13% Similarity=0.113 Sum_probs=62.1
Q ss_pred HHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhccccccc-----Ccccccc-------ccChhhHHHHHHHHhCC-Cce
Q psy11337 47 KCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDV-----ENIYSST-------KIGKDSCFERIVTRFGR-KCT 113 (155)
Q Consensus 47 k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpi-----eNIYSa~-------k~GKescFerI~~RFG~-k~~ 113 (155)
.+|..+.++ +.--++||++.---+-.++=-+|++.+|.- +.+++.. ...|...|+++.+++|- .-.
T Consensus 263 e~l~~Lk~~-G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~~~gi~~~~ 341 (415)
T 3p96_A 263 TTLRTLRRL-GYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQRAGVPMAQ 341 (415)
T ss_dssp HHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHC-CCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHHHcCcChhh
Confidence 344444333 345567777644333333334688777652 3333322 23589999999999984 456
Q ss_pred EEEecCCHHHHHHHHHcCCceeEecccccH
Q psy11337 114 YVVIGDGQDEEAAAKQRNFPFWRISSRSDL 143 (155)
Q Consensus 114 yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl 143 (155)
-++|||+..--.+|+..++++.- ..++.+
T Consensus 342 ~i~vGD~~~Di~~a~~aG~~va~-~~~~~~ 370 (415)
T 3p96_A 342 TVAVGDGANDIDMLAAAGLGIAF-NAKPAL 370 (415)
T ss_dssp EEEEECSGGGHHHHHHSSEEEEE-SCCHHH
T ss_pred EEEEECCHHHHHHHHHCCCeEEE-CCCHHH
Confidence 78999999999999999999885 444433
No 81
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=94.00 E-value=0.2 Score=37.47 Aligned_cols=42 Identities=14% Similarity=0.287 Sum_probs=35.3
Q ss_pred hhhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCCce-eEec
Q psy11337 97 KDSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPF-WRIS 138 (155)
Q Consensus 97 KescFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PF-wrI~ 138 (155)
|...|+++.+++| ..-.-++|||+...-++|+..+|++ .-+.
T Consensus 139 ~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~ 182 (218)
T 2o2x_A 139 NPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVD 182 (218)
T ss_dssp SCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEET
T ss_pred CHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEe
Confidence 4579999999998 4456789999998889999999998 6553
No 82
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=93.78 E-value=0.011 Score=44.18 Aligned_cols=92 Identities=13% Similarity=0.093 Sum_probs=58.0
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccc-cCccccccc----cChhhHHHHHHHHhC-CCceEEEec
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFD-VENIYSSTK----IGKDSCFERIVTRFG-RKCTYVVIG 118 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fp-ieNIYSa~k----~GKescFerI~~RFG-~k~~yvvIG 118 (155)
+...|+.+. + .+.+++|+..-.....++...+++.+|. ++-++++.. ..|...|+++.+++| +.-.-++||
T Consensus 127 ~~~~l~~l~-~--~~~~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~~iG 203 (259)
T 2ho4_A 127 LNQAFRLLL-D--GAPLIAIHKARYYKRKDGLALGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAVMIG 203 (259)
T ss_dssp HHHHHHHHH-T--TCCEEESCCCSEEEETTEEEECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGEEEEE
T ss_pred HHHHHHHHH-C--CCEEEEECCCCcCcccCCcccCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHEEEEC
Confidence 444455444 2 2234666654332222333455555554 123333322 246889999999998 445778999
Q ss_pred CCH-HHHHHHHHcCCceeEecc
Q psy11337 119 DGQ-DEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 119 DG~-eEe~aAk~~~~PFwrI~~ 139 (155)
|+. .--++|+..||+.+-|..
T Consensus 204 D~~~~Di~~a~~aG~~~i~v~~ 225 (259)
T 2ho4_A 204 DDCRDDVDGAQNIGMLGILVKT 225 (259)
T ss_dssp SCTTTTHHHHHHTTCEEEEESS
T ss_pred CCcHHHHHHHHHCCCcEEEECC
Confidence 998 888899999999988865
No 83
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=93.60 E-value=0.19 Score=38.36 Aligned_cols=80 Identities=14% Similarity=0.106 Sum_probs=53.4
Q ss_pred CceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCCcee
Q psy11337 57 SCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPFW 135 (155)
Q Consensus 57 ~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PFw 135 (155)
+..-++||+..--.+-..+=-+|+..+ |... ..|...++++.+++| ..-.-++|||+.---+++++.++++.
T Consensus 68 G~~~~ivT~~~~~~~~~~l~~lgi~~~------~~~~-k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va 140 (195)
T 3n07_A 68 GIEIAIITGRRSQIVENRMKALGISLI------YQGQ-DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVC 140 (195)
T ss_dssp TCEEEEECSSCCHHHHHHHHHTTCCEE------ECSC-SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEE
T ss_pred CCEEEEEECcCHHHHHHHHHHcCCcEE------eeCC-CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEE
Confidence 344466776543222221112344443 4433 579999999999998 34567889999999999999999987
Q ss_pred EecccccH
Q psy11337 136 RISSRSDL 143 (155)
Q Consensus 136 rI~~~~Dl 143 (155)
--+..+.+
T Consensus 141 ~~na~~~~ 148 (195)
T 3n07_A 141 VADGHPLL 148 (195)
T ss_dssp CTTSCHHH
T ss_pred ECChHHHH
Confidence 65555443
No 84
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=93.38 E-value=0.081 Score=39.77 Aligned_cols=85 Identities=16% Similarity=0.276 Sum_probs=55.0
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCcccccccc----------Chh---hHHH-------HHH
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKI----------GKD---SCFE-------RIV 105 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~----------GKe---scFe-------rI~ 105 (155)
..+|+.+.++ +.--++||++. -..+.++|= ||.++ +.|+|+... +|. .||+ ++.
T Consensus 83 ~~~l~~L~~~-g~~~~ivS~~~-~~~~~~~l~-~l~~~---~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~K~~~~ 156 (236)
T 2fea_A 83 REFVAFINEH-EIPFYVISGGM-DFFVYPLLE-GIVEK---DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVI 156 (236)
T ss_dssp HHHHHHHHHH-TCCEEEEEEEE-HHHHHHHHT-TTSCG---GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHHHH
T ss_pred HHHHHHHHhC-CCeEEEEeCCc-HHHHHHHHh-cCCCC---CeEEeeeeEEcCCceEEecCCCCccccccccCCcHHHHH
Confidence 3444444432 34446677664 333334443 66443 678876543 233 2776 888
Q ss_pred HHhCC-CceEEEecCCHHHHHHHHHcCCceeE
Q psy11337 106 TRFGR-KCTYVVIGDGQDEEAAAKQRNFPFWR 136 (155)
Q Consensus 106 ~RFG~-k~~yvvIGDG~eEe~aAk~~~~PFwr 136 (155)
+++|- .-.-++|||+..--.+|+..+++++.
T Consensus 157 ~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~ 188 (236)
T 2fea_A 157 HELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR 188 (236)
T ss_dssp HHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC
T ss_pred HHHhccCCeEEEEeCChHHHHHHHhCCeeeec
Confidence 99984 35678999999999999999999974
No 85
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=93.08 E-value=0.16 Score=39.28 Aligned_cols=75 Identities=9% Similarity=0.160 Sum_probs=52.1
Q ss_pred ceEEEEeCCCc--hHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCCce
Q psy11337 58 CTNVIVITTQL--IPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPF 134 (155)
Q Consensus 58 ~vNVLVTt~qL--VpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PF 134 (155)
.-=.++|+..- +..+++ -+|+..+|+ .. .+|...++++.+++| +.-.-++|||+.---++|++.++++
T Consensus 93 ~~l~I~T~~~~~~~~~~l~--~lgi~~~f~------~~-k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~ 163 (211)
T 3ij5_A 93 IDVAIITGRRAKLLEDRAN--TLGITHLYQ------GQ-SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSV 163 (211)
T ss_dssp CEEEEECSSCCHHHHHHHH--HHTCCEEEC------SC-SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEE
T ss_pred CEEEEEeCCCHHHHHHHHH--HcCCchhhc------cc-CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEE
Confidence 33456666553 222222 245555554 22 689999999999998 4456788999999999999999998
Q ss_pred eEecccc
Q psy11337 135 WRISSRS 141 (155)
Q Consensus 135 wrI~~~~ 141 (155)
.--+..+
T Consensus 164 a~~~~~~ 170 (211)
T 3ij5_A 164 AVADAHP 170 (211)
T ss_dssp ECTTSCT
T ss_pred EeCCccH
Confidence 7654443
No 86
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=93.03 E-value=0.21 Score=39.97 Aligned_cols=82 Identities=10% Similarity=0.092 Sum_probs=54.2
Q ss_pred ceEEEEeCCCchHHHHHHH--HhhcccccccC-----ccccc-----c--ccChhhHHHHHHHHhCCC-ceEEEecCCHH
Q psy11337 58 CTNVIVITTQLIPALSKIM--LFGLSGIFDVE-----NIYSS-----T--KIGKDSCFERIVTRFGRK-CTYVVIGDGQD 122 (155)
Q Consensus 58 ~vNVLVTt~qLVpaLaK~L--LygL~~~fpie-----NIYSa-----~--k~GKescFerI~~RFG~k-~~yvvIGDG~e 122 (155)
..-++||++.- ..++-+ -+|+..+|+.. ..++. . ...|...|+++.+++|-+ -.-++|||+..
T Consensus 195 ~~~~ivS~~~~--~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~v~vGDs~n 272 (335)
T 3n28_A 195 WKVAIASGGFT--YFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQQYDVEIHNTVAVGDGAN 272 (335)
T ss_dssp CEEEEEEEEEH--HHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred CEEEEEeCCcH--HHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHHHHHcCCChhhEEEEeCCHH
Confidence 44456666542 222222 36777766532 11111 1 135899999999999844 56789999999
Q ss_pred HHHHHHHcCCceeEeccccc
Q psy11337 123 EEAAAKQRNFPFWRISSRSD 142 (155)
Q Consensus 123 Ee~aAk~~~~PFwrI~~~~D 142 (155)
--.+|+..++++.- +.++.
T Consensus 273 Di~~a~~aG~~va~-~~~~~ 291 (335)
T 3n28_A 273 DLVMMAAAGLGVAY-HAKPK 291 (335)
T ss_dssp GHHHHHHSSEEEEE-SCCHH
T ss_pred HHHHHHHCCCeEEe-CCCHH
Confidence 99999999999875 44443
No 87
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=92.76 E-value=0.46 Score=37.56 Aligned_cols=79 Identities=14% Similarity=0.135 Sum_probs=53.8
Q ss_pred CceEEEEeCCCchHHHHHHHHh----h---------cccccccCccccccc-cCh--hhHHHHHHHHhC-CCceEEEecC
Q psy11337 57 SCTNVIVITTQLIPALSKIMLF----G---------LSGIFDVENIYSSTK-IGK--DSCFERIVTRFG-RKCTYVVIGD 119 (155)
Q Consensus 57 ~~vNVLVTt~qLVpaLaK~LLy----g---------L~~~fpieNIYSa~k-~GK--escFerI~~RFG-~k~~yvvIGD 119 (155)
+..=.++||+.-- .++.+|= | |..+| +.++++.- -+| ...|+.+.+++| +.-.-++|||
T Consensus 137 g~~l~i~Tn~~~~--~~~~~l~~~~~g~~~~~~~l~l~~~~--~~~f~~~~~g~KP~p~~~~~a~~~lg~~p~~~l~vgD 212 (253)
T 2g80_A 137 KKRVFIYSSGSVK--AQKLLFGYVQDPNAPAHDSLDLNSYI--DGYFDINTSGKKTETQSYANILRDIGAKASEVLFLSD 212 (253)
T ss_dssp CSCEEEECSSCHH--HHHHHHHSBCCTTCTTSCCBCCGGGC--CEEECHHHHCCTTCHHHHHHHHHHHTCCGGGEEEEES
T ss_pred CCEEEEEeCCCHH--HHHHHHHhhcccccccccccchHhhc--ceEEeeeccCCCCCHHHHHHHHHHcCCCcccEEEEcC
Confidence 5666788888743 3343332 3 22222 33343311 134 679999999998 4456789999
Q ss_pred CHHHHHHHHHcCCceeEecc
Q psy11337 120 GQDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 120 G~eEe~aAk~~~~PFwrI~~ 139 (155)
....-+||++.||+.+-+..
T Consensus 213 s~~di~aA~~aG~~~i~v~~ 232 (253)
T 2g80_A 213 NPLELDAAAGVGIATGLASR 232 (253)
T ss_dssp CHHHHHHHHTTTCEEEEECC
T ss_pred CHHHHHHHHHcCCEEEEEcC
Confidence 99999999999999988854
No 88
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=91.39 E-value=0.57 Score=32.98 Aligned_cols=41 Identities=22% Similarity=0.257 Sum_probs=36.1
Q ss_pred cChhhHHHHHHHHhCC-CceEEEecCCHHHHHHHHHcCCcee
Q psy11337 95 IGKDSCFERIVTRFGR-KCTYVVIGDGQDEEAAAKQRNFPFW 135 (155)
Q Consensus 95 ~GKescFerI~~RFG~-k~~yvvIGDG~eEe~aAk~~~~PFw 135 (155)
.+|...+.++.+++|- .-.-++|||+.---++|+..+++++
T Consensus 142 ~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~ 183 (211)
T 1l7m_A 142 NAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIA 183 (211)
T ss_dssp THHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEE
T ss_pred ccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEE
Confidence 5688999999999984 4568999999999999999999876
No 89
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=91.09 E-value=1.5 Score=30.73 Aligned_cols=91 Identities=15% Similarity=0.135 Sum_probs=53.6
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhc--ccccccCccc---------cccccChhhHHHHHHHHhC-CCc
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGL--SGIFDVENIY---------SSTKIGKDSCFERIVTRFG-RKC 112 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL--~~~fpieNIY---------Sa~k~GKescFerI~~RFG-~k~ 112 (155)
+...|+.+.++ +..-+++|++.---.-.++=-+|+ ..+|..+-++ ...+..|..-.+.+.+++| +.-
T Consensus 87 ~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 165 (219)
T 3kd3_A 87 IKELVQDLKNK-GFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAKGLIDG 165 (219)
T ss_dssp HHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHGGGCCS
T ss_pred HHHHHHHHHHC-CCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHhCCCCC
Confidence 44555555444 344456676543222223333555 3355532222 2244456777888888888 567
Q ss_pred eEEEecCCHHHHHHHHHcCCceeEe
Q psy11337 113 TYVVIGDGQDEEAAAKQRNFPFWRI 137 (155)
Q Consensus 113 ~yvvIGDG~eEe~aAk~~~~PFwrI 137 (155)
.-++|||+..--++| +.|+...-|
T Consensus 166 ~~~~vGD~~~Di~~~-~~G~~~~~v 189 (219)
T 3kd3_A 166 EVIAIGDGYTDYQLY-EKGYATKFI 189 (219)
T ss_dssp EEEEEESSHHHHHHH-HHTSCSEEE
T ss_pred CEEEEECCHhHHHHH-hCCCCcEEE
Confidence 789999999877787 568874444
No 90
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=90.86 E-value=0.33 Score=36.51 Aligned_cols=86 Identities=9% Similarity=0.054 Sum_probs=56.9
Q ss_pred HhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhC-CCceEEEecCCHHHHHHH
Q psy11337 49 LTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFG-RKCTYVVIGDGQDEEAAA 127 (155)
Q Consensus 49 L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG-~k~~yvvIGDG~eEe~aA 127 (155)
|+.+.++ +.--.++|+...+..+++-+-+++. +|... ..|...++++.+++| ..-.-++|||+.---+++
T Consensus 45 L~~Lk~~-Gi~~~I~Tg~~~~~~~l~~l~lgi~-------~~~g~-~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~ 115 (168)
T 3ewi_A 45 ISLLKKS-GIEVRLISERACSKQTLSALKLDCK-------TEVSV-SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECL 115 (168)
T ss_dssp HHHHHHT-TCEEEEECSSCCCHHHHHTTCCCCC-------EECSC-SCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHH
T ss_pred HHHHHHC-CCEEEEEeCcHHHHHHHHHhCCCcE-------EEECC-CChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHH
Confidence 3444444 3344677877444444443322332 33332 479999999999998 445678899999999999
Q ss_pred HHcCCceeEecccccH
Q psy11337 128 KQRNFPFWRISSRSDL 143 (155)
Q Consensus 128 k~~~~PFwrI~~~~Dl 143 (155)
+..++++.--+.++.+
T Consensus 116 ~~ag~~~a~~na~~~~ 131 (168)
T 3ewi_A 116 KRVGLSAVPADACSGA 131 (168)
T ss_dssp HHSSEEEECTTCCHHH
T ss_pred HHCCCEEEeCChhHHH
Confidence 9999998754444433
No 91
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=90.31 E-value=1.6 Score=32.78 Aligned_cols=87 Identities=7% Similarity=-0.008 Sum_probs=57.1
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCcccccccc--Ch--hhHHHHHHHHhCCC--ceEEEec
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKI--GK--DSCFERIVTRFGRK--CTYVVIG 118 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~--GK--escFerI~~RFG~k--~~yvvIG 118 (155)
+..+|+.+.++ ++.-.++|+..-. ...+.+ + .+ .+-|+++-.+ +| ...|..+.+++|-. -.-++||
T Consensus 41 ~~e~L~~L~~~-g~~~~i~T~~~~~-~~~~~~--~--~~--~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~v~VG 112 (196)
T 2oda_A 41 AQNALKALRDQ-GMPCAWIDELPEA-LSTPLA--A--PV--NDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGCVLIS 112 (196)
T ss_dssp HHHHHHHHHHH-TCCEEEECCSCHH-HHHHHH--T--TT--TTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTTCEEEE
T ss_pred HHHHHHHHHHC-CCEEEEEcCChHH-HHHHhc--C--cc--CCEEEECCcCCCCCCChHHHHHHHHHcCCCCCccEEEEe
Confidence 45555555444 3333566665433 223322 2 12 2456665543 34 57899999999853 5688999
Q ss_pred CCHHHHHHHHHcCCceeEecc
Q psy11337 119 DGQDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 119 DG~eEe~aAk~~~~PFwrI~~ 139 (155)
|...--+||++.||+++-+..
T Consensus 113 Ds~~Di~aA~~aG~~~i~v~~ 133 (196)
T 2oda_A 113 GDPRLLQSGLNAGLWTIGLAS 133 (196)
T ss_dssp SCHHHHHHHHHHTCEEEEESS
T ss_pred CCHHHHHHHHHCCCEEEEEcc
Confidence 999999999999999988865
No 92
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=89.55 E-value=0.41 Score=36.14 Aligned_cols=45 Identities=24% Similarity=0.437 Sum_probs=38.1
Q ss_pred cChhh--HHHHHHHHhC-CCceEEEecCC-HHHHHHHHHcCCceeEecc
Q psy11337 95 IGKDS--CFERIVTRFG-RKCTYVVIGDG-QDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 95 ~GKes--cFerI~~RFG-~k~~yvvIGDG-~eEe~aAk~~~~PFwrI~~ 139 (155)
.||.+ .|+++.+++| +.-.-++|||+ ...-++|++.||+++-|..
T Consensus 181 ~~KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~ 229 (264)
T 1yv9_A 181 IGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTS 229 (264)
T ss_dssp CSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETT
T ss_pred cCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECC
Confidence 56764 9999999998 45678999999 5888899999999888764
No 93
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=88.32 E-value=1.1 Score=34.17 Aligned_cols=87 Identities=14% Similarity=0.074 Sum_probs=54.4
Q ss_pred HHHHHHhhhhcCCCceEEEEeCCCc---hHHHHHHHHhhccccccc--Ccc-ccccccC--hhhHHHHHHHHhCCCceEE
Q psy11337 44 LAIKCLTLINQRPSCTNVIVITTQL---IPALSKIMLFGLSGIFDV--ENI-YSSTKIG--KDSCFERIVTRFGRKCTYV 115 (155)
Q Consensus 44 ~A~k~L~~i~~r~~~vNVLVTt~qL---VpaLaK~LLygL~~~fpi--eNI-YSa~k~G--KescFerI~~RFG~k~~yv 115 (155)
.+...|+.+.++ +..=+++|+..- -..+.+ |..+|.. .+. ++....+ +...|+++.+++|- -+
T Consensus 92 ~~~e~l~~L~~~-G~~l~ivTn~~~~~~~~~l~~-----l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~---~l 162 (211)
T 2b82_A 92 VARQLIDMHVRR-GDAIFFVTGRSPTKTETVSKT-----LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI---RI 162 (211)
T ss_dssp HHHHHHHHHHHH-TCEEEEEECSCCCSSCCHHHH-----HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE---EE
T ss_pred HHHHHHHHHHHC-CCEEEEEcCCcHHHHHHHHHH-----HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC---EE
Confidence 345555555443 344567888752 222333 2333332 111 1111122 36789999999986 78
Q ss_pred EecCCHHHHHHHHHcCCceeEecc
Q psy11337 116 VIGDGQDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 116 vIGDG~eEe~aAk~~~~PFwrI~~ 139 (155)
+|||...--+||++.||+++-+..
T Consensus 163 ~VGDs~~Di~aA~~aG~~~i~v~~ 186 (211)
T 2b82_A 163 FYGDSDNDITAARDVGARGIRILR 186 (211)
T ss_dssp EEESSHHHHHHHHHTTCEEEECCC
T ss_pred EEECCHHHHHHHHHCCCeEEEEec
Confidence 899999999999999999988865
No 94
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=88.18 E-value=0.7 Score=33.17 Aligned_cols=45 Identities=13% Similarity=0.112 Sum_probs=39.0
Q ss_pred cChhhHHHHHHHHhC-CCceEEEecCC-HHHHHHHHHcCCceeEecc
Q psy11337 95 IGKDSCFERIVTRFG-RKCTYVVIGDG-QDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 95 ~GKescFerI~~RFG-~k~~yvvIGDG-~eEe~aAk~~~~PFwrI~~ 139 (155)
..|...|+++.+++| +.-.-++|||+ ..--++|+..|+++.-|..
T Consensus 176 kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~ 222 (250)
T 2c4n_A 176 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLS 222 (250)
T ss_dssp TTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESS
T ss_pred CCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECC
Confidence 458899999999998 55678999999 6889999999999988764
No 95
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=87.75 E-value=0.17 Score=39.05 Aligned_cols=96 Identities=18% Similarity=0.247 Sum_probs=59.9
Q ss_pred HHHHHHHHHHhhhhcCCCceEEEEeCCCchHH--HHHHH--HhhcccccccCccccccc--cChh--hHHHHHHHHh---
Q psy11337 40 NWLSLAIKCLTLINQRPSCTNVIVITTQLIPA--LSKIM--LFGLSGIFDVENIYSSTK--IGKD--SCFERIVTRF--- 108 (155)
Q Consensus 40 ~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpa--LaK~L--LygL~~~fpieNIYSa~k--~GKe--scFerI~~RF--- 108 (155)
.|.....+.++.+.++ ++. .++|++...-. -.+.+ -.++..+| +.++++.. .||. ..|+.+.+++
T Consensus 145 ~~~~~~~~l~~~L~~~-g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f--~~~~~~~~~~~~KP~p~~~~~a~~~l~~~ 220 (284)
T 2hx1_A 145 NWFHDLNKTVNLLRKR-TIP-AIVANTDNTYPLTKTDVAIAIGGVATMI--ESILGRRFIRFGKPDSQMFMFAYDMLRQK 220 (284)
T ss_dssp CHHHHHHHHHHHHHHC-CCC-EEEECCCSEEECSSSCEEECHHHHHHHH--HHHHCSCEEEESTTSSHHHHHHHHHHHTT
T ss_pred CccccHHHHHHHHhcC-CCe-EEEECCCccccCcCCCccccCChHHHHH--HHHhCCceeEecCCCHHHHHHHHHHHhhc
Confidence 3444444555444333 445 88888743211 00111 13444444 33555443 4554 5999999999
Q ss_pred -C-CCceEEEecCCH-HHHHHHHHcCCceeEecc
Q psy11337 109 -G-RKCTYVVIGDGQ-DEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 109 -G-~k~~yvvIGDG~-eEe~aAk~~~~PFwrI~~ 139 (155)
| +.-.-++|||.. .--++|++.||+..-+..
T Consensus 221 ~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~ 254 (284)
T 2hx1_A 221 MEISKREILMVGDTLHTDILGGNKFGLDTALVLT 254 (284)
T ss_dssp SCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESS
T ss_pred cCCCcceEEEECCCcHHHHHHHHHcCCeEEEECC
Confidence 8 456789999995 778899999999988864
No 96
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=87.69 E-value=1.9 Score=33.73 Aligned_cols=80 Identities=13% Similarity=0.142 Sum_probs=49.5
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhCCCceEEEecCCHHHH
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFGRKCTYVVIGDGQDEE 124 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG~k~~yvvIGDG~eEe 124 (155)
+...|+.+.++ +.--+++|++.-...-..+=-+|+..+|. .+.. .+|..+.+ ++|.+-.-++|||+..--
T Consensus 168 ~~~~l~~L~~~-g~~~~i~T~~~~~~~~~~l~~~gl~~~f~--~i~~---~~K~~~~~----~l~~~~~~~~vGDs~~Di 237 (287)
T 3a1c_A 168 AKPAVQELKRM-GIKVGMITGDNWRSAEAISRELNLDLVIA--EVLP---HQKSEEVK----KLQAKEVVAFVGDGINDA 237 (287)
T ss_dssp HHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHHTCSEEEC--SCCT---TCHHHHHH----HHTTTCCEEEEECTTTCH
T ss_pred HHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHhCCceeee--ecCh---HHHHHHHH----HHhcCCeEEEEECCHHHH
Confidence 34555555443 34456777776443333333457777764 3332 36755554 454335568999999999
Q ss_pred HHHHHcCCce
Q psy11337 125 AAAKQRNFPF 134 (155)
Q Consensus 125 ~aAk~~~~PF 134 (155)
++|+..++++
T Consensus 238 ~~a~~ag~~v 247 (287)
T 3a1c_A 238 PALAQADLGI 247 (287)
T ss_dssp HHHHHSSEEE
T ss_pred HHHHHCCeeE
Confidence 9999999984
No 97
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=86.16 E-value=2.8 Score=31.18 Aligned_cols=82 Identities=12% Similarity=0.203 Sum_probs=53.2
Q ss_pred HHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhCCCceEEEecCCHHH
Q psy11337 44 LAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFGRKCTYVVIGDGQDE 123 (155)
Q Consensus 44 ~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG~k~~yvvIGDG~eE 123 (155)
-+...|+.+.++ +..-+++|+..---+-..+=-+|+..+|. ++.++ .|....+...+.| .-++|||+.--
T Consensus 148 ~~~~~l~~l~~~-g~~~~i~T~~~~~~~~~~~~~~gl~~~f~--~~~~~---~k~~~~k~~~~~~----~~~~vGD~~nD 217 (280)
T 3skx_A 148 ESREAISKLKAI-GIKCMMLTGDNRFVAKWVAEELGLDDYFA--EVLPH---EKAEKVKEVQQKY----VTAMVGDGVND 217 (280)
T ss_dssp THHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHHTCSEEEC--SCCGG---GHHHHHHHHHTTS----CEEEEECTTTT
T ss_pred hHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHcCChhHhH--hcCHH---HHHHHHHHHHhcC----CEEEEeCCchh
Confidence 345556666554 33345667665443333333456766664 45444 4667777777777 33999999999
Q ss_pred HHHHHHcCCcee
Q psy11337 124 EAAAKQRNFPFW 135 (155)
Q Consensus 124 e~aAk~~~~PFw 135 (155)
-++|+..++++.
T Consensus 218 i~~~~~Ag~~va 229 (280)
T 3skx_A 218 APALAQADVGIA 229 (280)
T ss_dssp HHHHHHSSEEEE
T ss_pred HHHHHhCCceEE
Confidence 999999998764
No 98
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=85.66 E-value=0.95 Score=33.23 Aligned_cols=44 Identities=16% Similarity=0.284 Sum_probs=38.5
Q ss_pred ChhhHHHHHHHHhC-CCceEEEecCCH-HHHHHHHHcCCceeEecc
Q psy11337 96 GKDSCFERIVTRFG-RKCTYVVIGDGQ-DEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 96 GKescFerI~~RFG-~k~~yvvIGDG~-eEe~aAk~~~~PFwrI~~ 139 (155)
.|...|+++.+++| +.-.-++|||+. .--++|+..|+++.-|..
T Consensus 191 pk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~ 236 (271)
T 2x4d_A 191 PSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRT 236 (271)
T ss_dssp TCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESS
T ss_pred CCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcC
Confidence 57999999999998 456779999997 788899999999988865
No 99
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=84.73 E-value=3 Score=35.31 Aligned_cols=91 Identities=14% Similarity=0.073 Sum_probs=59.5
Q ss_pred HHHHHHHhhhhcCCCceEEEEeCCCc------h----HHHHHHHHhhcccccccCccccccccC--h--hhHHHHHHHHh
Q psy11337 43 SLAIKCLTLINQRPSCTNVIVITTQL------I----PALSKIMLFGLSGIFDVENIYSSTKIG--K--DSCFERIVTRF 108 (155)
Q Consensus 43 s~A~k~L~~i~~r~~~vNVLVTt~qL------V----paLaK~LLygL~~~fpieNIYSa~k~G--K--escFerI~~RF 108 (155)
.-+..+|..+.++ +.--++||+..= - ...++-+|=.+|-. ++-++++..++ | ...|+.+.+++
T Consensus 90 pgv~e~L~~L~~~-G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~i~~~~~~~~~KP~p~~~~~a~~~l 166 (416)
T 3zvl_A 90 PEIPKKLQELAAE-GYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGLNRKPVSGMWDHLQEQA 166 (416)
T ss_dssp TTHHHHHHHHHHT-TCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSTTSTTSSHHHHHHHHHS
T ss_pred ccHHHHHHHHHHC-CCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEEEECCCCCCCCCCHHHHHHHHHHh
Confidence 3455666666544 455678888431 1 11233344444433 45677776654 4 47899999999
Q ss_pred C-----CCceEEEecCCH-----------------HHHHHHHHcCCceeE
Q psy11337 109 G-----RKCTYVVIGDGQ-----------------DEEAAAKQRNFPFWR 136 (155)
Q Consensus 109 G-----~k~~yvvIGDG~-----------------eEe~aAk~~~~PFwr 136 (155)
| ..-.-++|||.. .--.+|+..|++|..
T Consensus 167 ~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~ 216 (416)
T 3zvl_A 167 NEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFAT 216 (416)
T ss_dssp STTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEEC
T ss_pred CCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccC
Confidence 7 445678999996 567899999999964
No 100
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=83.96 E-value=1.6 Score=32.91 Aligned_cols=45 Identities=16% Similarity=0.187 Sum_probs=38.5
Q ss_pred cChhhHHHHHHHHhC-CCceEEEecCCH-HHHHHHHHcCCceeEecc
Q psy11337 95 IGKDSCFERIVTRFG-RKCTYVVIGDGQ-DEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 95 ~GKescFerI~~RFG-~k~~yvvIGDG~-eEe~aAk~~~~PFwrI~~ 139 (155)
..|...|+++.+++| +.-.-++|||+. .--++|+..|+++.-+..
T Consensus 195 kpk~~~~~~~~~~lgi~~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~ 241 (271)
T 1vjr_A 195 KPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLT 241 (271)
T ss_dssp TTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESS
T ss_pred CCCHHHHHHHHHHhCCCCceEEEECCCcHHHHHHHHHcCCeEEEECC
Confidence 348899999999998 456789999994 788899999999988864
No 101
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=83.83 E-value=4 Score=31.28 Aligned_cols=49 Identities=18% Similarity=0.394 Sum_probs=40.2
Q ss_pred ccChhhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCCceeEecc-cccH
Q psy11337 94 KIGKDSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPFWRISS-RSDL 143 (155)
Q Consensus 94 k~GKescFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~-~~Dl 143 (155)
.+.|...++++.+++| ..-.-++|||+.---++++..++++. +.. ++++
T Consensus 189 ~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va-~~na~~~~ 239 (271)
T 1rlm_A 189 GLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFA-MGNAAENI 239 (271)
T ss_dssp TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEE-CTTCCHHH
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEE-eCCccHHH
Confidence 5689999999999998 44678999999999999999999876 433 4443
No 102
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=80.68 E-value=1.6 Score=32.87 Aligned_cols=42 Identities=24% Similarity=0.256 Sum_probs=36.6
Q ss_pred ccChhhHHHHHHHHhCC-CceEEEecCCHHHHHHHHHcCCcee
Q psy11337 94 KIGKDSCFERIVTRFGR-KCTYVVIGDGQDEEAAAKQRNFPFW 135 (155)
Q Consensus 94 k~GKescFerI~~RFG~-k~~yvvIGDG~eEe~aAk~~~~PFw 135 (155)
...|...++++.+++|- .-.-++|||+.--.++++..++++.
T Consensus 151 ~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~ 193 (231)
T 1wr8_A 151 WINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVA 193 (231)
T ss_dssp TCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred CCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEE
Confidence 45799999999999984 4567899999999999999999965
No 103
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=80.13 E-value=2.8 Score=31.74 Aligned_cols=52 Identities=15% Similarity=0.226 Sum_probs=40.8
Q ss_pred cccChhhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCCceeEecccccHH
Q psy11337 93 TKIGKDSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDLA 144 (155)
Q Consensus 93 ~k~GKescFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~ 144 (155)
..+.|....+++.+++| +.-.-++|||+.---++++..++++.-=+..+++.
T Consensus 194 ~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k 246 (279)
T 4dw8_A 194 QGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVK 246 (279)
T ss_dssp TTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHH
T ss_pred CCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHH
Confidence 34679999999999998 44578999999999999999998775434444443
No 104
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=79.89 E-value=2 Score=33.59 Aligned_cols=43 Identities=14% Similarity=0.158 Sum_probs=36.7
Q ss_pred hhhHHHHHHHHhC-CCceEEEecCCH-HHHHHHHHcCCceeEecc
Q psy11337 97 KDSCFERIVTRFG-RKCTYVVIGDGQ-DEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 97 KescFerI~~RFG-~k~~yvvIGDG~-eEe~aAk~~~~PFwrI~~ 139 (155)
|...|+.+.+++| +.-.-++|||+. ..-++|+..||+++-|..
T Consensus 217 ~~~~~~~~~~~lgi~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~ 261 (306)
T 2oyc_A 217 SPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLT 261 (306)
T ss_dssp STHHHHHHHHHSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESS
T ss_pred CHHHHHHHHHHcCCChHHEEEECCCchHHHHHHHHCCCeEEEECC
Confidence 4559999999998 446779999996 788899999999988865
No 105
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=79.01 E-value=7.8 Score=30.05 Aligned_cols=92 Identities=11% Similarity=0.085 Sum_probs=54.9
Q ss_pred HHHHHHHhhhhcCCCceEEEEeCCCc------hHHHHHHH-----HhhcccccccCccccccc---cChhhHHHHHHHHh
Q psy11337 43 SLAIKCLTLINQRPSCTNVIVITTQL------IPALSKIM-----LFGLSGIFDVENIYSSTK---IGKDSCFERIVTRF 108 (155)
Q Consensus 43 s~A~k~L~~i~~r~~~vNVLVTt~qL------VpaLaK~L-----LygL~~~fpieNIYSa~k---~GKescFerI~~RF 108 (155)
.-+..+|+.+.++ +.--+++|+..- ...|.+.- -+|+ +.+-+++... --+...+..+.++.
T Consensus 191 ~g~~e~L~~L~~~-g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~kp~p~~~~~~~~~~ 265 (301)
T 1ltq_A 191 PMVVELSKMYALM-GYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV----PLVMQCQREQGDTRKDDVVKEEIFWKH 265 (301)
T ss_dssp HHHHHHHHHHHHT-TCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC----CCSEEEECCTTCCSCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHC-CCeEEEEeCCCcccchhHHHHHHhcccccccccCC----CchheeeccCCCCcHHHHHHHHHHHHH
Confidence 3355556555543 344566777652 22333300 0355 2234443221 13566788888888
Q ss_pred CCC--ceEEEecCCHHHHHHHHHcCCceeEecc
Q psy11337 109 GRK--CTYVVIGDGQDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 109 G~k--~~yvvIGDG~eEe~aAk~~~~PFwrI~~ 139 (155)
|.. -..++|||..---+||++.|+|++-+..
T Consensus 266 ~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~ 298 (301)
T 1ltq_A 266 IAPHFDVKLAIDDRTQVVEMWRRIGVECWQVAS 298 (301)
T ss_dssp TTTTCEEEEEEECCHHHHHHHHHTTCCEEECSC
T ss_pred hccccceEEEeCCcHHHHHHHHHcCCeEEEecC
Confidence 643 2346799999999999999999988764
No 106
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=78.94 E-value=13 Score=32.33 Aligned_cols=86 Identities=9% Similarity=0.046 Sum_probs=56.5
Q ss_pred HHHHhhhhcCCCceEEEEeCCCchHHHHHHHH------hhcccccccCccccccccChhhHHHHHHHHhC-CCceEEEec
Q psy11337 46 IKCLTLINQRPSCTNVIVITTQLIPALSKIML------FGLSGIFDVENIYSSTKIGKDSCFERIVTRFG-RKCTYVVIG 118 (155)
Q Consensus 46 ~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LL------ygL~~~fpieNIYSa~k~GKescFerI~~RFG-~k~~yvvIG 118 (155)
...|+...++ +..-.++|+.. -+...+.+= +++.++|.+ +- ..-.|...|+++.+++| ..-.-++||
T Consensus 262 ~e~L~~Lk~~-Gi~laI~Snn~-~~~v~~~l~~~~~~~l~l~~~~~v---~~-~~KPKp~~l~~al~~Lgl~pee~v~VG 335 (387)
T 3nvb_A 262 QEWVKKLKNR-GIIIAVCSKNN-EGKAKEPFERNPEMVLKLDDIAVF---VA-NWENKADNIRTIQRTLNIGFDSMVFLD 335 (387)
T ss_dssp HHHHHHHHHT-TCEEEEEEESC-HHHHHHHHHHCTTCSSCGGGCSEE---EE-ESSCHHHHHHHHHHHHTCCGGGEEEEC
T ss_pred HHHHHHHHHC-CCEEEEEcCCC-HHHHHHHHhhccccccCccCccEE---Ee-CCCCcHHHHHHHHHHhCcCcccEEEEC
Confidence 3344444433 45556777766 333334331 566666654 33 33469999999999998 557789999
Q ss_pred CCHHHHHHHHHc--CCceeEe
Q psy11337 119 DGQDEEAAAKQR--NFPFWRI 137 (155)
Q Consensus 119 DG~eEe~aAk~~--~~PFwrI 137 (155)
|..-+.++|++. ++-...+
T Consensus 336 Ds~~Di~aaraalpgV~vi~~ 356 (387)
T 3nvb_A 336 DNPFERNMVREHVPGVTVPEL 356 (387)
T ss_dssp SCHHHHHHHHHHSTTCBCCCC
T ss_pred CCHHHHHHHHhcCCCeEEEEc
Confidence 999999999887 4444433
No 107
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=78.05 E-value=2.9 Score=31.75 Aligned_cols=49 Identities=16% Similarity=0.229 Sum_probs=39.5
Q ss_pred ccChhhHHHHHHHHhCC-CceEEEecCCHHHHHHHHHcCCceeEeccccc
Q psy11337 94 KIGKDSCFERIVTRFGR-KCTYVVIGDGQDEEAAAKQRNFPFWRISSRSD 142 (155)
Q Consensus 94 k~GKescFerI~~RFG~-k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~D 142 (155)
...|...++++.+++|- .-.-++|||+.---++++..++++.--+.+++
T Consensus 185 ~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~ 234 (261)
T 2rbk_A 185 GDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKED 234 (261)
T ss_dssp TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH
T ss_pred CCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHH
Confidence 45799999999999984 45778999999999999999998754333443
No 108
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=77.88 E-value=2.4 Score=33.31 Aligned_cols=53 Identities=21% Similarity=0.385 Sum_probs=34.6
Q ss_pred hHHHHHHHHhC-CCceEEEecCCHHH-----HHHHHHcCCceeEec---ccccHHHHHHHhhc
Q psy11337 99 SCFERIVTRFG-RKCTYVVIGDGQDE-----EAAAKQRNFPFWRIS---SRSDLAALYHALDN 152 (155)
Q Consensus 99 scFerI~~RFG-~k~~yvvIGDG~eE-----e~aAk~~~~PFwrI~---~~~Dl~~L~~al~~ 152 (155)
.+|+++.++.. ++++++++|+|.++ ++.+++++ ....+. ++.|+..++.+.+.
T Consensus 272 ~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~-~~~~~~g~~~~~~~~~~~~~adv 333 (439)
T 3fro_A 272 KAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRELYGSVDF 333 (439)
T ss_dssp HHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHHTTCSE
T ss_pred HHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcC-CEEEEcCCCCHHHHHHHHHHCCE
Confidence 46666666553 89999999999766 34566666 443332 45567777766553
No 109
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=76.89 E-value=8 Score=29.97 Aligned_cols=109 Identities=12% Similarity=-0.020 Sum_probs=63.0
Q ss_pred HHHHHHHHhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHH
Q psy11337 26 EWLQLRAEIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIV 105 (155)
Q Consensus 26 ~w~~lr~e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~ 105 (155)
.+.++...++.-..+-+..++.++.....+....=|.++|.. +.. -.|-...|+++|.+=+.-.+.+.
T Consensus 118 ~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~-----------~~~-~~~~~~~Y~asKaa~~~l~~~la 185 (260)
T 3gem_A 118 EADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDV-----------TRK-GSSKHIAYCATKAGLESLTLSFA 185 (260)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGG-----------GGT-CCSSCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChh-----------hcC-CCCCcHhHHHHHHHHHHHHHHHH
Confidence 344445556666666666677777776554433333344421 111 13445689999999999999999
Q ss_pred HHhCCCceEEEecCCH--------HHHHHHHHcCCceeEecccccHHHH
Q psy11337 106 TRFGRKCTYVVIGDGQ--------DEEAAAKQRNFPFWRISSRSDLAAL 146 (155)
Q Consensus 106 ~RFG~k~~yvvIGDG~--------eEe~aAk~~~~PFwrI~~~~Dl~~L 146 (155)
..++++++..+|.-|. ++.........|+-|+..-.|+...
T Consensus 186 ~e~~~~Irvn~v~PG~v~t~~~~~~~~~~~~~~~~p~~r~~~~edva~~ 234 (260)
T 3gem_A 186 ARFAPLVKVNGIAPALLMFQPKDDAAYRANALAKSALGIEPGAEVIYQS 234 (260)
T ss_dssp HHHTTTCEEEEEEECTTCC---------------CCSCCCCCTHHHHHH
T ss_pred HHHCCCCEEEEEeecccccCCCCCHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 9998888888876552 1111222334677776665665543
No 110
>3mw8_A Uroporphyrinogen-III synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 1.65A {Shewanella amazonensis}
Probab=76.88 E-value=4.4 Score=31.01 Aligned_cols=40 Identities=20% Similarity=0.275 Sum_probs=34.9
Q ss_pred CceEEEecCCHHHHHHHHHcCCceeEecccccHHHHHHHhhc
Q psy11337 111 KCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDLAALYHALDN 152 (155)
Q Consensus 111 k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~~L~~al~~ 152 (155)
++.+++|| +-..++++++||.-..+...|+..+|-.|++|
T Consensus 201 ~~~~~aiG--~~ta~~l~~~G~~~~~va~~p~~~~ll~al~~ 240 (240)
T 3mw8_A 201 DCHIIVPS--ARVETQARKKGLRRVTNAGAANQAAVLDALGM 240 (240)
T ss_dssp HSEEEESS--HHHHHHHHHTTCCCEEECSSSSHHHHHHHHTC
T ss_pred CCCEEEEC--HHHHHHHHHcCCCceEeCCCCCHHHHHHHhhC
Confidence 57888885 56888999999999899999999999999875
No 111
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=76.79 E-value=2.9 Score=31.48 Aligned_cols=44 Identities=11% Similarity=0.199 Sum_probs=37.5
Q ss_pred ChhhHHHHHHHHhC-CCceEEEecCC-HHHHHHHHHcCCceeEecc
Q psy11337 96 GKDSCFERIVTRFG-RKCTYVVIGDG-QDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 96 GKescFerI~~RFG-~k~~yvvIGDG-~eEe~aAk~~~~PFwrI~~ 139 (155)
.|...|+.+.+++| +.-.-++|||+ .---++|+..|++.+-+..
T Consensus 184 p~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~ 229 (266)
T 3pdw_A 184 PESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHT 229 (266)
T ss_dssp TSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECC
T ss_pred CCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECC
Confidence 35589999999998 55678999999 6788899999999988873
No 112
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=76.63 E-value=3.4 Score=31.38 Aligned_cols=43 Identities=9% Similarity=0.190 Sum_probs=36.4
Q ss_pred hhhHHHHHHHHhC-CCceEEEecCC-HHHHHHHHHcCCceeEecc
Q psy11337 97 KDSCFERIVTRFG-RKCTYVVIGDG-QDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 97 KescFerI~~RFG-~k~~yvvIGDG-~eEe~aAk~~~~PFwrI~~ 139 (155)
|...|+.+.+++| ..-.-++|||+ .---++|+..|++.+-|..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~ 228 (264)
T 3epr_A 184 NAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTT 228 (264)
T ss_dssp SHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETT
T ss_pred CHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECC
Confidence 4567999999998 44678999999 5788899999999988864
No 113
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=76.55 E-value=3.8 Score=31.75 Aligned_cols=54 Identities=15% Similarity=0.251 Sum_probs=34.9
Q ss_pred hhHHHHHHHHhCCCceEEEecCCHHHHHHHHH-----cCCceeEecccccHHHHHHHhhc
Q psy11337 98 DSCFERIVTRFGRKCTYVVIGDGQDEEAAAKQ-----RNFPFWRISSRSDLAALYHALDN 152 (155)
Q Consensus 98 escFerI~~RFG~k~~yvvIGDG~eEe~aAk~-----~~~PFwrI~~~~Dl~~L~~al~~ 152 (155)
...|+++.++ ++++.++++|+|.+++...+. -++-|.---++.|+..++.+.+.
T Consensus 217 i~a~~~l~~~-~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~ 275 (394)
T 3okp_A 217 IKAMPQVIAA-RPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI 275 (394)
T ss_dssp HHHHHHHHHH-STTCEEEEECCCTTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE
T ss_pred HHHHHHHHhh-CCCeEEEEEcCchHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE
Confidence 3456666655 689999999999766654432 23444444445778888776553
No 114
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=76.51 E-value=3.8 Score=32.51 Aligned_cols=53 Identities=9% Similarity=0.070 Sum_probs=34.7
Q ss_pred hHHHHHHHHhCCCceEEEecCCHHH---------HHHHHHcCCce--------eEe-cc--cccHHHHHHHhhc
Q psy11337 99 SCFERIVTRFGRKCTYVVIGDGQDE---------EAAAKQRNFPF--------WRI-SS--RSDLAALYHALDN 152 (155)
Q Consensus 99 scFerI~~RFG~k~~yvvIGDG~eE---------e~aAk~~~~PF--------wrI-~~--~~Dl~~L~~al~~ 152 (155)
..|.++.++ ++++.+++||+|.++ ++.+++++++- ..+ .. +.|+..++.+.+.
T Consensus 204 ~a~~~l~~~-~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv 276 (413)
T 3oy2_A 204 LAAARFISK-YPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDV 276 (413)
T ss_dssp HHHHHHHHH-CTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCSE
T ss_pred HHHHHHHHh-CCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHHHHHHHhCCE
Confidence 456666555 578999999999754 34556677772 222 22 4578888877653
No 115
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=76.19 E-value=3.1 Score=31.95 Aligned_cols=52 Identities=13% Similarity=0.209 Sum_probs=40.7
Q ss_pred cccChhhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCCceeEecccccHH
Q psy11337 93 TKIGKDSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDLA 144 (155)
Q Consensus 93 ~k~GKescFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~ 144 (155)
..+.|.+.++++.+++| ..-.-++|||+.---++++..++++.--+.++++.
T Consensus 187 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~ 239 (268)
T 1nf2_A 187 KNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVK 239 (268)
T ss_dssp TTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHH
T ss_pred CCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHH
Confidence 35789999999999998 44567899999999999999999875434444443
No 116
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=75.95 E-value=3.5 Score=30.97 Aligned_cols=43 Identities=16% Similarity=0.160 Sum_probs=37.0
Q ss_pred hhhHHHHHHHHhC-CCceEEEecCC-HHHHHHHHHcCCceeEecc
Q psy11337 97 KDSCFERIVTRFG-RKCTYVVIGDG-QDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 97 KescFerI~~RFG-~k~~yvvIGDG-~eEe~aAk~~~~PFwrI~~ 139 (155)
|...|+++.+++| +.-.-++|||+ .---++|+..||+..-|..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~ 233 (268)
T 3qgm_A 189 SEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLT 233 (268)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESS
T ss_pred CHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECC
Confidence 5589999999998 55788999999 5788899999999877754
No 117
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=75.04 E-value=2.2 Score=33.05 Aligned_cols=51 Identities=18% Similarity=0.076 Sum_probs=31.3
Q ss_pred hhHHHHHHHHhCCCceEEEecCCHHHHHHHHHcCCceeEeccccc--HHHHHHHh
Q psy11337 98 DSCFERIVTRFGRKCTYVVIGDGQDEEAAAKQRNFPFWRISSRSD--LAALYHAL 150 (155)
Q Consensus 98 escFerI~~RFG~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~D--l~~L~~al 150 (155)
+.+-+.|.+-....+. |||||+ --.+.|+++|+|..-|.|-.+ ..++..|+
T Consensus 129 ~e~~~~i~~l~~~G~~-vvVG~~-~~~~~A~~~Gl~~vli~sg~eSI~~Ai~eA~ 181 (196)
T 2q5c_A 129 DEITTLISKVKTENIK-IVVSGK-TVTDEAIKQGLYGETINSGEESLRRAIEEAL 181 (196)
T ss_dssp GGHHHHHHHHHHTTCC-EEEECH-HHHHHHHHTTCEEEECCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCe-EEECCH-HHHHHHHHcCCcEEEEecCHHHHHHHHHHHH
Confidence 3444444443323333 489987 558899999999999987433 33444444
No 118
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=74.90 E-value=1.9 Score=33.34 Aligned_cols=53 Identities=19% Similarity=0.270 Sum_probs=33.9
Q ss_pred HHHHHHHHhCCCceEEEecCCHHHH--HHHHHcCCc--eeEecccccHHHHHHHhhc
Q psy11337 100 CFERIVTRFGRKCTYVVIGDGQDEE--AAAKQRNFP--FWRISSRSDLAALYHALDN 152 (155)
Q Consensus 100 cFerI~~RFG~k~~yvvIGDG~eEe--~aAk~~~~P--FwrI~~~~Dl~~L~~al~~ 152 (155)
.|+++.+++++++.++++|+|.+++ +.+++++.+ +.-+....|+..++.+.+.
T Consensus 217 a~~~l~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~ 273 (374)
T 2iw1_A 217 ALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADL 273 (374)
T ss_dssp HHHTSCHHHHHTEEEEEESSSCCHHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCSE
T ss_pred HHHHhHhccCCceEEEEEcCCCHHHHHHHHHHcCCCCcEEECCCcccHHHHHHhcCE
Confidence 4455555556789999999996543 345555542 3333456788888877653
No 119
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=74.88 E-value=2.9 Score=32.14 Aligned_cols=52 Identities=8% Similarity=0.158 Sum_probs=41.5
Q ss_pred cccChhhHHHHHHHHhCC-CceEEEecCCHHHHHHHHHcCCceeEecccccHH
Q psy11337 93 TKIGKDSCFERIVTRFGR-KCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDLA 144 (155)
Q Consensus 93 ~k~GKescFerI~~RFG~-k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~ 144 (155)
...+|...++++.+++|- .-.-++|||+.--..+++..++++.--+.++.+.
T Consensus 208 ~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~ 260 (289)
T 3gyg_A 208 IGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAK 260 (289)
T ss_dssp SCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHH
T ss_pred CCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHH
Confidence 456799999999999984 4567889999999999999998876545444443
No 120
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=71.72 E-value=4.6 Score=31.23 Aligned_cols=50 Identities=14% Similarity=0.221 Sum_probs=39.6
Q ss_pred ccChhhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCCceeEecccccH
Q psy11337 94 KIGKDSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDL 143 (155)
Q Consensus 94 k~GKescFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl 143 (155)
.+.|.+.++++.+++| ..-.-++|||+.---++++..++++.--+.++++
T Consensus 214 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~ 264 (288)
T 1nrw_A 214 KASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDI 264 (288)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHH
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHH
Confidence 4689999999999998 4457799999999999999999976532334444
No 121
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=71.70 E-value=10 Score=29.09 Aligned_cols=52 Identities=13% Similarity=0.241 Sum_probs=42.1
Q ss_pred ccChhhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCCceeEecccccHHH
Q psy11337 94 KIGKDSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDLAA 145 (155)
Q Consensus 94 k~GKescFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~~ 145 (155)
.+.|....+++.+++| +.-.-++|||+.--.+.++..++++--=+.++++.+
T Consensus 207 ~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~ 259 (285)
T 3pgv_A 207 GVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKD 259 (285)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHH
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHH
Confidence 4679999999999998 446679999999999999999988765555555544
No 122
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=69.39 E-value=6.7 Score=29.24 Aligned_cols=52 Identities=19% Similarity=0.332 Sum_probs=41.8
Q ss_pred cccChhhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCCceeEecccccHH
Q psy11337 93 TKIGKDSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDLA 144 (155)
Q Consensus 93 ~k~GKescFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~ 144 (155)
..+.|....+++.+++| ..-.-++|||+.---++++..++++---+.++++.
T Consensus 197 ~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k 249 (274)
T 3fzq_A 197 KDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLK 249 (274)
T ss_dssp TTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHH
T ss_pred CCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHH
Confidence 34679999999999998 45677999999999999999998877544454443
No 123
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=68.90 E-value=3.9 Score=32.77 Aligned_cols=50 Identities=18% Similarity=0.124 Sum_probs=32.0
Q ss_pred hhhHHHHHHHHhCCCceEEEecCCHHHHHHHHHcCCceeEecccccHHHHHHHhh
Q psy11337 97 KDSCFERIVTRFGRKCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDLAALYHALD 151 (155)
Q Consensus 97 KescFerI~~RFG~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~~L~~al~ 151 (155)
.+.+-+.|.+-....+. |||||+ --.+.|+++|+|..-|.+. .+.+.|++
T Consensus 140 ~ee~~~~i~~l~~~G~~-vVVG~~-~~~~~A~~~Gl~~vlI~s~---eSI~~Ai~ 189 (225)
T 2pju_A 140 EEDARGQINELKANGTE-AVVGAG-LITDLAEEAGMTGIFIYSA---ATVRQAFS 189 (225)
T ss_dssp HHHHHHHHHHHHHTTCC-EEEESH-HHHHHHHHTTSEEEESSCH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCC-EEECCH-HHHHHHHHcCCcEEEECCH---HHHHHHHH
Confidence 33444444444423333 489988 5588999999999999962 55555554
No 124
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=68.15 E-value=7.1 Score=31.86 Aligned_cols=52 Identities=13% Similarity=0.168 Sum_probs=34.3
Q ss_pred HHHHHHHHhCCCceEEEecCCHHHH----HHHHHcCCceeE----------ecccccHHHHHHHhhc
Q psy11337 100 CFERIVTRFGRKCTYVVIGDGQDEE----AAAKQRNFPFWR----------ISSRSDLAALYHALDN 152 (155)
Q Consensus 100 cFerI~~RFG~k~~yvvIGDG~eEe----~aAk~~~~PFwr----------I~~~~Dl~~L~~al~~ 152 (155)
.|.++++++ +++.+++||||.+.. +-++++++.+.. .....|+..++.+.+.
T Consensus 215 A~~~l~~~~-p~~~lvivG~g~~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~~dl~~~y~~aDv 280 (374)
T 2xci_A 215 AFKEIKKTY-SSLKLILVPRHIENAKIFEKKARDFGFKTSFFENLEGDVILVDRFGILKELYPVGKI 280 (374)
T ss_dssp HHHHHHTTC-TTCEEEEEESSGGGHHHHHHHHHHTTCCEEETTCCCSSEEECCSSSCHHHHGGGEEE
T ss_pred HHHHHHhhC-CCcEEEEECCCHHHHHHHHHHHHHCCCceEEecCCCCcEEEECCHHHHHHHHHhCCE
Confidence 345555443 689999999997642 235567776421 2335889999888764
No 125
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=67.93 E-value=5.9 Score=30.09 Aligned_cols=52 Identities=12% Similarity=0.164 Sum_probs=42.5
Q ss_pred ccChhhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCCceeEecccccHHH
Q psy11337 94 KIGKDSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDLAA 145 (155)
Q Consensus 94 k~GKescFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~~ 145 (155)
.+.|.+-.+++.+++| ..-.-++|||+.---++++..++++.--+.++.+.+
T Consensus 200 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~ 252 (290)
T 3dnp_A 200 GVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKR 252 (290)
T ss_dssp TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHH
T ss_pred CCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHH
Confidence 4679999999999998 456779999999999999999998876555555443
No 126
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=67.84 E-value=7.3 Score=32.56 Aligned_cols=54 Identities=11% Similarity=0.143 Sum_probs=36.4
Q ss_pred hhHHHHHHHHhCCCceEEEec-CCHHHHH---HHHHcCCc-----eeEecccccHHHHHHHhhc
Q psy11337 98 DSCFERIVTRFGRKCTYVVIG-DGQDEEA---AAKQRNFP-----FWRISSRSDLAALYHALDN 152 (155)
Q Consensus 98 escFerI~~RFG~k~~yvvIG-DG~eEe~---aAk~~~~P-----FwrI~~~~Dl~~L~~al~~ 152 (155)
...|.+|.++. +++.++++| ||.++++ .+++++.. |.--.++.|+..++.+.+.
T Consensus 394 i~a~~~l~~~~-~~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv 456 (568)
T 2vsy_A 394 MARMLAVLREV-PDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADL 456 (568)
T ss_dssp HHHHHHHHHHC-TTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSE
T ss_pred HHHHHHHHHhC-CCcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCE
Confidence 35677776664 889999999 9976544 46667764 3333334588888877654
No 127
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=66.27 E-value=14 Score=28.77 Aligned_cols=50 Identities=12% Similarity=0.316 Sum_probs=40.4
Q ss_pred ccChhhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCCceeEecccccH
Q psy11337 94 KIGKDSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDL 143 (155)
Q Consensus 94 k~GKescFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl 143 (155)
.+.|....+++.+++| ..-.-++|||+.---++++..++++--=+..+.+
T Consensus 226 ~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~ 276 (304)
T 3l7y_A 226 GLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNV 276 (304)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHHH
T ss_pred CCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHH
Confidence 4679999999999998 4567899999999999999999887544444443
No 128
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=64.35 E-value=5.7 Score=30.02 Aligned_cols=51 Identities=12% Similarity=0.202 Sum_probs=38.2
Q ss_pred ccChhhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCCceeEecccccHH
Q psy11337 94 KIGKDSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDLA 144 (155)
Q Consensus 94 k~GKescFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~ 144 (155)
.+.|....+++.+++| +.-.-++|||+.---++++..++++--=+..+.+.
T Consensus 195 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k 246 (279)
T 3mpo_A 195 RASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVK 246 (279)
T ss_dssp SCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHH
T ss_pred CCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHH
Confidence 4569999999999998 45678999999999999999998876555555554
No 129
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=63.48 E-value=7.7 Score=30.02 Aligned_cols=42 Identities=14% Similarity=0.264 Sum_probs=36.4
Q ss_pred ccChhhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCCcee
Q psy11337 94 KIGKDSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPFW 135 (155)
Q Consensus 94 k~GKescFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PFw 135 (155)
.+.|.+..+++.+++| ..-.-++|||+.--.++++..++++.
T Consensus 196 ~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va 238 (282)
T 1rkq_A 196 RVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVA 238 (282)
T ss_dssp TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred CCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEE
Confidence 4689999999999998 44678999999999999999988654
No 130
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=62.91 E-value=0.2 Score=36.86 Aligned_cols=81 Identities=9% Similarity=0.042 Sum_probs=48.5
Q ss_pred HHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhccc-ccccCccccccccChhhHHHHHHHHhC-CCceEEEecCC
Q psy11337 43 SLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSG-IFDVENIYSSTKIGKDSCFERIVTRFG-RKCTYVVIGDG 120 (155)
Q Consensus 43 s~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~-~fpieNIYSa~k~GKescFerI~~RFG-~k~~yvvIGDG 120 (155)
.-+...|+.+.++++..-.+||++.-.-.-.++--+|+.. +|+ ....+++| ..-.-++|||.
T Consensus 78 ~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f~----------------~~~~~~l~~~~~~~~~vgDs 141 (197)
T 1q92_A 78 PGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG----------------PDFLEQIVLTRDKTVVSADL 141 (197)
T ss_dssp TTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC----------------GGGGGGEEECSCSTTSCCSE
T ss_pred cCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhch----------------HHHHHHhccCCccEEEECcc
Confidence 3445566666555356667888875432223333356666 776 33445554 22233567887
Q ss_pred HHH----HHHHH-HcCCceeEecc
Q psy11337 121 QDE----EAAAK-QRNFPFWRISS 139 (155)
Q Consensus 121 ~eE----e~aAk-~~~~PFwrI~~ 139 (155)
.-. -+||+ ..||+.+-+..
T Consensus 142 ~~dD~~~~~~a~~~aG~~~i~~~~ 165 (197)
T 1q92_A 142 LIDDRPDITGAEPTPSWEHVLFTA 165 (197)
T ss_dssp EEESCSCCCCSCSSCSSEEEEECC
T ss_pred cccCCchhhhcccCCCceEEEecC
Confidence 666 68898 99998887754
No 131
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=62.17 E-value=9 Score=28.69 Aligned_cols=52 Identities=10% Similarity=0.134 Sum_probs=42.5
Q ss_pred ccChhhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCCceeEecccccHHH
Q psy11337 94 KIGKDSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDLAA 145 (155)
Q Consensus 94 k~GKescFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~~ 145 (155)
.+.|..-.+++.+++| +.-.-++|||+.---+.++..++++--=+.++++.+
T Consensus 192 ~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~ 244 (268)
T 3r4c_A 192 GTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQS 244 (268)
T ss_dssp TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHH
T ss_pred CCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHH
Confidence 4679999999999998 556789999999999999999988765555655543
No 132
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=61.63 E-value=24 Score=24.63 Aligned_cols=44 Identities=16% Similarity=0.370 Sum_probs=34.0
Q ss_pred ccChhhHHHHHHHHh--CCCceEEE-ecC------CHHHHHHHHHcCCceeEe
Q psy11337 94 KIGKDSCFERIVTRF--GRKCTYVV-IGD------GQDEEAAAKQRNFPFWRI 137 (155)
Q Consensus 94 k~GKescFerI~~RF--G~k~~yvv-IGD------G~eEe~aAk~~~~PFwrI 137 (155)
+...++..++|.+.- |+++.|+. .|| |.++.+.+++.++|+--|
T Consensus 62 ~~~~~~~~~~i~~~~~~G~~V~~l~d~GdP~i~~~~~~l~~~~~~~gi~v~vi 114 (117)
T 3hh1_A 62 SFNEERAVRQVIELLEEGSDVALVTDAGTPAISDPGYTMASAAHAAGLPVVPV 114 (117)
T ss_dssp STTHHHHHHHHHHHHHTTCCEEEEEETTSCGGGSTTHHHHHHHHHTTCCEEEE
T ss_pred CccHHHHHHHHHHHHHCCCeEEEEecCCcCeEeccHHHHHHHHHHCCCcEEEe
Confidence 444456667787776 99999999 677 778888889999987554
No 133
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=61.59 E-value=2.1 Score=29.64 Aligned_cols=41 Identities=15% Similarity=0.232 Sum_probs=26.1
Q ss_pred CCceEEEecCCHHHHH---HHHHcCCceeEecc--cccHHHHHHHhh
Q psy11337 110 RKCTYVVIGDGQDEEA---AAKQRNFPFWRISS--RSDLAALYHALD 151 (155)
Q Consensus 110 ~k~~yvvIGDG~eEe~---aAk~~~~PFwrI~~--~~Dl~~L~~al~ 151 (155)
++++++++|+|.++++ .+++++. -.++.. +.|+..++.+.+
T Consensus 31 ~~~~l~i~G~g~~~~~~~~~~~~~~~-~v~~g~~~~~~~~~~~~~ad 76 (166)
T 3qhp_A 31 QDIVLLLKGKGPDEKKIKLLAQKLGV-KAEFGFVNSNELLEILKTCT 76 (166)
T ss_dssp GGEEEEEECCSTTHHHHHHHHHHHTC-EEECCCCCHHHHHHHHTTCS
T ss_pred CCeEEEEEeCCccHHHHHHHHHHcCC-eEEEeecCHHHHHHHHHhCC
Confidence 6899999999976543 4455554 233322 566777776654
No 134
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=61.43 E-value=7.5 Score=29.52 Aligned_cols=43 Identities=12% Similarity=0.062 Sum_probs=36.9
Q ss_pred ccChhhHHHHHHHHhCC-CceEEEecCCHHHHHHHHHcCCceeE
Q psy11337 94 KIGKDSCFERIVTRFGR-KCTYVVIGDGQDEEAAAKQRNFPFWR 136 (155)
Q Consensus 94 k~GKescFerI~~RFG~-k~~yvvIGDG~eEe~aAk~~~~PFwr 136 (155)
.+.|.+..+++.+++|- .-.-++|||+.--.++++..++++.-
T Consensus 151 ~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~ 194 (227)
T 1l6r_A 151 GEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACP 194 (227)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEEC
T ss_pred CCCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCceEEe
Confidence 47899999999999983 35678999999999999999998764
No 135
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=60.64 E-value=13 Score=27.79 Aligned_cols=51 Identities=12% Similarity=0.122 Sum_probs=40.6
Q ss_pred cccChhhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCCceeEecccccH
Q psy11337 93 TKIGKDSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDL 143 (155)
Q Consensus 93 ~k~GKescFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl 143 (155)
..+.|.+-.+++.+++| ..-.-++|||+.---+.++..++++.-=+.++++
T Consensus 180 ~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~ 231 (258)
T 2pq0_A 180 AGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEV 231 (258)
T ss_dssp SSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHHH
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHH
Confidence 35789999999999998 4467899999999999999999988732334433
No 136
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=58.00 E-value=17 Score=27.56 Aligned_cols=42 Identities=14% Similarity=0.094 Sum_probs=34.2
Q ss_pred hhhHHHHHHHHhCCCceEEEecCCH-HHHHHHHHcCCceeEecc
Q psy11337 97 KDSCFERIVTRFGRKCTYVVIGDGQ-DEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 97 KescFerI~~RFG~k~~yvvIGDG~-eEe~aAk~~~~PFwrI~~ 139 (155)
+...|+.+.++ =+.-.-++|||.. .--.+|++.||..+-|..
T Consensus 189 ~~~~~~~~~~~-~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~ 231 (263)
T 1zjj_A 189 NEPMYEVVREM-FPGEELWMVGDRLDTDIAFAKKFGMKAIMVLT 231 (263)
T ss_dssp SHHHHHHHHHH-STTCEEEEEESCTTTHHHHHHHTTCEEEEESS
T ss_pred CHHHHHHHHHh-CCcccEEEECCChHHHHHHHHHcCCeEEEECC
Confidence 46789999999 4555778999995 668899999999887764
No 137
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=57.72 E-value=54 Score=24.65 Aligned_cols=62 Identities=16% Similarity=0.160 Sum_probs=43.4
Q ss_pred cCccccccccChhhHHHHHHHHhCCCceEEEecCCH----------HHHHHHHHcCCceeEecccccHHHHH
Q psy11337 86 VENIYSSTKIGKDSCFERIVTRFGRKCTYVVIGDGQ----------DEEAAAKQRNFPFWRISSRSDLAALY 147 (155)
Q Consensus 86 ieNIYSa~k~GKescFerI~~RFG~k~~yvvIGDG~----------eEe~aAk~~~~PFwrI~~~~Dl~~L~ 147 (155)
-...|+++|.+=+.-.+.+...++++++..+|.-|. ++....-....|.-|...-.|+.+..
T Consensus 171 ~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~~ 242 (267)
T 3gdg_A 171 EQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMGRDGLAKELKGAY 242 (267)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCHHHHHHHHTTSTTSSCEETHHHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCHHHHHHHHhcCCCCCCcCHHHHHhHh
Confidence 456899999999999999999998877777765542 23333334456777776666665544
No 138
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=56.75 E-value=13 Score=29.30 Aligned_cols=52 Identities=21% Similarity=0.340 Sum_probs=31.7
Q ss_pred hHHHHHHHHhCCCceEEEecCCHHHHH---HHHHcCCc--eeEecccccHHHHHHHhhc
Q psy11337 99 SCFERIVTRFGRKCTYVVIGDGQDEEA---AAKQRNFP--FWRISSRSDLAALYHALDN 152 (155)
Q Consensus 99 scFerI~~RFG~k~~yvvIGDG~eEe~---aAk~~~~P--FwrI~~~~Dl~~L~~al~~ 152 (155)
..|+++.++ .++.++++|||.++++ .+++++.+ +.-+..+.|+..++.+.+.
T Consensus 231 ~a~~~l~~~--~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv 287 (394)
T 2jjm_A 231 QAFAKIVTE--VDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL 287 (394)
T ss_dssp HHHHHHHHS--SCCEEEEECCCTTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE
T ss_pred HHHHHHHhh--CCCEEEEECCchHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE
Confidence 455566555 4689999999976543 34555442 1112246778888776553
No 139
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=55.88 E-value=0.38 Score=35.10 Aligned_cols=78 Identities=17% Similarity=0.163 Sum_probs=48.4
Q ss_pred HHHHHHhhhhcCCCceEEEEeCCCc---hHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhC-CCceEEEecC
Q psy11337 44 LAIKCLTLINQRPSCTNVIVITTQL---IPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFG-RKCTYVVIGD 119 (155)
Q Consensus 44 ~A~k~L~~i~~r~~~vNVLVTt~qL---VpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG-~k~~yvvIGD 119 (155)
-+..+|+.+.++.++--++||++.- -..|.+ +|+ | +.|+++ .+.+++| +.-.-++|||
T Consensus 77 g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~---~gl---f--~~i~~~----------~~~~~~~~~~~~~~~vgD 138 (193)
T 2i7d_A 77 GALDAVREMNDLPDTQVFICTSPLLKYHHCVGEK---YRW---V--EQHLGP----------QFVERIILTRDKTVVLGD 138 (193)
T ss_dssp THHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHH---HHH---H--HHHHCH----------HHHTTEEECSCGGGBCCS
T ss_pred CHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHH---hCc---h--hhhcCH----------HHHHHcCCCcccEEEECC
Confidence 3556666665543566788888743 222332 233 2 445543 1567786 3334567899
Q ss_pred CHHH----HHHHH-HcCCceeEecc
Q psy11337 120 GQDE----EAAAK-QRNFPFWRISS 139 (155)
Q Consensus 120 G~eE----e~aAk-~~~~PFwrI~~ 139 (155)
+... -+||+ ..||+.+-+..
T Consensus 139 s~~dD~~~i~~A~~~aG~~~i~~~~ 163 (193)
T 2i7d_A 139 LLIDDKDTVRGQEETPSWEHILFTC 163 (193)
T ss_dssp EEEESSSCCCSSCSSCSSEEEEECC
T ss_pred chhhCcHHHhhcccccccceEEEEe
Confidence 8766 78999 99999888764
No 140
>1wcw_A Uroporphyrinogen III synthase; congenital erythropoietic porph structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} PDB: 1wd7_A 1wcx_A
Probab=55.70 E-value=20 Score=27.43 Aligned_cols=39 Identities=10% Similarity=0.239 Sum_probs=32.1
Q ss_pred CceEEEecCCHHHHHHHHHcCCceeEecccccHHHHHHHhh
Q psy11337 111 KCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDLAALYHALD 151 (155)
Q Consensus 111 k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~~L~~al~ 151 (155)
++.+++||. -..++++++|+.-..+...++..+|-.++.
T Consensus 215 ~~~~~aIG~--~Ta~~l~~~G~~~~~~a~~~~~~~l~~~l~ 253 (261)
T 1wcw_A 215 RVKALAVGR--VTADALREWGVKPFYVDETERLGSLLQGFK 253 (261)
T ss_dssp TSEEEEESH--HHHHHHHHTTCCCSEEECSCCHHHHHHHHH
T ss_pred CCEEEEECH--HHHHHHHHcCCCCceecCCCCHHHHHHHHH
Confidence 678889975 478899999998887788899988887764
No 141
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=55.59 E-value=15 Score=30.46 Aligned_cols=42 Identities=21% Similarity=0.472 Sum_probs=32.0
Q ss_pred hhHHHHHHHHh--CC-Cce-EEEecCCHHHHHHHHHcCCceeEecc
Q psy11337 98 DSCFERIVTRF--GR-KCT-YVVIGDGQDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 98 escFerI~~RF--G~-k~~-yvvIGDG~eEe~aAk~~~~PFwrI~~ 139 (155)
-+|++.|..|. |. ++. =+||++..+=...|+++|+||..+..
T Consensus 106 g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~gIp~~~~~~ 151 (292)
T 3lou_A 106 EHCLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQHGLPFRHFPI 151 (292)
T ss_dssp CHHHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHHTTCCEEECCC
T ss_pred CcCHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHHcCCCEEEeCC
Confidence 38999999987 53 233 35677777767789999999998753
No 142
>2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A
Probab=55.18 E-value=10 Score=27.20 Aligned_cols=26 Identities=19% Similarity=0.330 Sum_probs=19.1
Q ss_pred CCceEEEecCCH--HHHHHHHHcCCcee
Q psy11337 110 RKCTYVVIGDGQ--DEEAAAKQRNFPFW 135 (155)
Q Consensus 110 ~k~~yvvIGDG~--eEe~aAk~~~~PFw 135 (155)
+|.+|+|+|+.. ---.-|+++++|.+
T Consensus 69 kkTd~LV~G~~~g~sK~~kA~~lgI~Ii 96 (109)
T 2k6g_A 69 KKTNYLVMGRDSGQSKSDKAAALGTKII 96 (109)
T ss_dssp TTCCEEEECBCCCHHHHHHHHHHTCEEE
T ss_pred CCceEEEECCCCChHHHHHHHHcCCeEE
Confidence 578999999943 34456888997755
No 143
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=54.63 E-value=17 Score=27.97 Aligned_cols=52 Identities=13% Similarity=0.250 Sum_probs=41.6
Q ss_pred ccChhhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCCceeEecccccHHH
Q psy11337 94 KIGKDSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDLAA 145 (155)
Q Consensus 94 k~GKescFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~~ 145 (155)
.+.|..-.+++.+++| +.-.-++|||+.---+.++..++++--=+.++.+.+
T Consensus 209 ~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~ 261 (283)
T 3dao_A 209 GVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIA 261 (283)
T ss_dssp TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHH
T ss_pred CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHH
Confidence 4569999999999998 456679999999999999999988765555555443
No 144
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=54.03 E-value=7.7 Score=27.44 Aligned_cols=52 Identities=21% Similarity=0.416 Sum_probs=29.8
Q ss_pred hHHHHHH--HHhCCCceEEEecCCH--HHH---HHHHHcC-Cce-eEecccccHHHHHHHhh
Q psy11337 99 SCFERIV--TRFGRKCTYVVIGDGQ--DEE---AAAKQRN-FPF-WRISSRSDLAALYHALD 151 (155)
Q Consensus 99 scFerI~--~RFG~k~~yvvIGDG~--eEe---~aAk~~~-~PF-wrI~~~~Dl~~L~~al~ 151 (155)
..|+++. +++ ++++++++|+|. ..+ +.+++++ +-| ..--++.++..++.+.+
T Consensus 57 ~a~~~l~~~~~~-~~~~l~i~G~~~~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~ad 117 (200)
T 2bfw_A 57 KAIEILSSKKEF-QEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVD 117 (200)
T ss_dssp HHHHHHTTSGGG-GGEEEEEECCBCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCS
T ss_pred HHHHHHHhhccC-CCeEEEEECCCChHHHHHHHHHHHhcCCEEEEeccCCHHHHHHHHHHCC
Confidence 4566665 443 789999999997 332 2344554 222 21223347777776654
No 145
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=53.62 E-value=31 Score=26.46 Aligned_cols=40 Identities=15% Similarity=0.008 Sum_probs=33.9
Q ss_pred CCceEEEecCCHHHHHHHHHcCCceeEecccccHHHHHHHhh
Q psy11337 110 RKCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDLAALYHALD 151 (155)
Q Consensus 110 ~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~~L~~al~ 151 (155)
+++.+++|| +-..++++++||.-..+...++..+|-.|+.
T Consensus 212 ~~~~~~aIG--~~Ta~~l~~~G~~~~~~a~~~~~~~l~~ai~ 251 (254)
T 4es6_A 212 GRLPLFVPS--PRVAEMARELGAQRVIDCRGASAPALLAALT 251 (254)
T ss_dssp TTSCEEESS--HHHHHHHHHTTCSSEEECSSSSHHHHHHHHH
T ss_pred hCCeEEEEC--HHHHHHHHHcCCCceEECCCCCHHHHHHHHH
Confidence 467888886 4688899999999988899999999988875
No 146
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=51.81 E-value=13 Score=28.16 Aligned_cols=52 Identities=10% Similarity=0.107 Sum_probs=39.7
Q ss_pred ccChhhHHHHHHHHhCC-CceEEEecCCHHHHHHHHHcCCceeEecccccHHH
Q psy11337 94 KIGKDSCFERIVTRFGR-KCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDLAA 145 (155)
Q Consensus 94 k~GKescFerI~~RFG~-k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~~ 145 (155)
.+.|.+..+++.+++|- .-.-++|||+.--.+.++..++++.-=+.++++.+
T Consensus 160 ~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~ 212 (244)
T 1s2o_A 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLH 212 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHH
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHH
Confidence 56899999999999983 45678999999888888888777544344444544
No 147
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=50.47 E-value=28 Score=27.57 Aligned_cols=55 Identities=20% Similarity=0.277 Sum_probs=34.0
Q ss_pred hhHHHHHHHHh-CCCceEEEecC----CHHHH---HHHHHcCCc----eeEecccccHHHHHHHhhc
Q psy11337 98 DSCFERIVTRF-GRKCTYVVIGD----GQDEE---AAAKQRNFP----FWRISSRSDLAALYHALDN 152 (155)
Q Consensus 98 escFerI~~RF-G~k~~yvvIGD----G~eEe---~aAk~~~~P----FwrI~~~~Dl~~L~~al~~ 152 (155)
...|+.+.+++ +.++.++++|+ |.+++ +.+++++.+ |..--++.|+..++.+.+.
T Consensus 262 i~a~~~l~~~~p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv 328 (438)
T 3c48_A 262 IKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI 328 (438)
T ss_dssp HHHHHHHHHHCTTCSEEEEEECCBC------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE
T ss_pred HHHHHHHHhhCCCcceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE
Confidence 35777888877 56899999999 64432 345666553 3322344678888877654
No 148
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=49.99 E-value=15 Score=29.09 Aligned_cols=46 Identities=13% Similarity=0.288 Sum_probs=38.2
Q ss_pred cccChhhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCCceeEecc
Q psy11337 93 TKIGKDSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 93 ~k~GKescFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~ 139 (155)
..+.|..-.+++.+++| ..-.-++|||+.--.++++..++++. +..
T Consensus 221 ~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va-~~n 267 (301)
T 2b30_A 221 LGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFA-VAN 267 (301)
T ss_dssp TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEE-CTT
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEE-EcC
Confidence 35689999999999998 44567999999999999999998865 443
No 149
>3pa6_A Microcephalin; BRCT domain, cell cycle; HET: MSE; 1.50A {Homo sapiens} PDB: 3ktf_A* 2wt8_A*
Probab=49.19 E-value=4.2 Score=29.08 Aligned_cols=41 Identities=20% Similarity=0.332 Sum_probs=29.3
Q ss_pred hhHHHHHHHHhC--------CCceEEEecCCH-HHHHHHHHcCCceeEec
Q psy11337 98 DSCFERIVTRFG--------RKCTYVVIGDGQ-DEEAAAKQRNFPFWRIS 138 (155)
Q Consensus 98 escFerI~~RFG--------~k~~yvvIGDG~-eEe~aAk~~~~PFwrI~ 138 (155)
.+.|..+...+| +++|-||+.++. .+-+.|++.++|.+.+.
T Consensus 27 s~~l~~~l~~~GA~v~~~l~~~vTHvV~~~~~~~~~~~A~~~~i~iV~~~ 76 (107)
T 3pa6_A 27 SKTFTTQLVDMGAKVSKTFNKQVTHVIFKDGYQSTWDKAQKRGVKLVSVL 76 (107)
T ss_dssp HHHHHHHHHHTTCEECSSCCTTCCEEEEESCCHHHHHHHHHHTCEEECHH
T ss_pred HHHHHHHHHHcCCEEecccCCCccEEEEeCCCChHHHHHhcCCCEEECHH
Confidence 356777776665 458899997655 45678899998887654
No 150
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=48.23 E-value=24 Score=29.16 Aligned_cols=42 Identities=21% Similarity=0.483 Sum_probs=31.9
Q ss_pred hhHHHHHHHHh--CC-Cce-EEEecCCHHHHHHHHHcCCceeEecc
Q psy11337 98 DSCFERIVTRF--GR-KCT-YVVIGDGQDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 98 escFerI~~RF--G~-k~~-yvvIGDG~eEe~aAk~~~~PFwrI~~ 139 (155)
-+|++-|..|. |. ++. =+||++..+=.+.|+++|+||..+..
T Consensus 101 g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~gIp~~~~~~ 146 (286)
T 3n0v_A 101 DHCLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHWHKIPYYHFAL 146 (286)
T ss_dssp CHHHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHHTTCCEEECCC
T ss_pred CCCHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHHcCCCEEEeCC
Confidence 39999999988 42 233 35677777666789999999998753
No 151
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=53.83 E-value=3.8 Score=31.91 Aligned_cols=82 Identities=15% Similarity=0.184 Sum_probs=46.2
Q ss_pred HHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhCCC-ceEEEecCCH
Q psy11337 43 SLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFGRK-CTYVVIGDGQ 121 (155)
Q Consensus 43 s~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG~k-~~yvvIGDG~ 121 (155)
.-+...|+.+.++. .--+++|+.+--.+-..+=-+|+..+|. ++. -..| ..+.+++|.+ -.-++||||.
T Consensus 139 ~g~~~~l~~L~~~g-~~~~i~T~~~~~~~~~~~~~~gl~~~f~--~~~---p~~k----~~~~~~l~~~~~~~~~VGD~~ 208 (263)
T 2yj3_A 139 PNLKDYLEKLKNEG-LKIIILSGDKEDKVKELSKELNIQEYYS--NLS---PEDK----VRIIEKLKQNGNKVLMIGDGV 208 (263)
Confidence 33445555554432 3346777765443333333346666653 222 1234 4455555432 3567899999
Q ss_pred HHHHHHHHcCCce
Q psy11337 122 DEEAAAKQRNFPF 134 (155)
Q Consensus 122 eEe~aAk~~~~PF 134 (155)
.--.||++.++.+
T Consensus 209 ~D~~aa~~Agv~v 221 (263)
T 2yj3_A 209 NDAAALALADVSV 221 (263)
Confidence 8888999999764
No 152
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=47.70 E-value=14 Score=27.95 Aligned_cols=47 Identities=11% Similarity=0.118 Sum_probs=39.5
Q ss_pred cChhhHHHHHHHHhCCC---ceEEEecCCHHHHHHHHHcCCceeEecccc
Q psy11337 95 IGKDSCFERIVTRFGRK---CTYVVIGDGQDEEAAAKQRNFPFWRISSRS 141 (155)
Q Consensus 95 ~GKescFerI~~RFG~k---~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~ 141 (155)
+.|....+++.+++|-+ -.-++|||+.--.+.++..++++.-=+.++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~ 224 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP 224 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh
Confidence 78999999999999955 678999999999999999999876444333
No 153
>2ebu_A Replication factor C subunit 1; A/B/A 3 layers, parallel beta-sheet, DNA replication, clamp loader, RFC1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.44 E-value=14 Score=26.79 Aligned_cols=27 Identities=19% Similarity=0.314 Sum_probs=19.7
Q ss_pred CCceEEEecCCH--HHHHHHHHcCCceeE
Q psy11337 110 RKCTYVVIGDGQ--DEEAAAKQRNFPFWR 136 (155)
Q Consensus 110 ~k~~yvvIGDG~--eEe~aAk~~~~PFwr 136 (155)
+|.+|+|+|+.. ---+-|+++++|.+.
T Consensus 59 kkTd~LV~G~~~g~sKl~KA~~lgI~Iis 87 (112)
T 2ebu_A 59 KKTNYLVMGRDSGQSKSDKAAALGTKIID 87 (112)
T ss_dssp SSCCEEEECSSCCSHHHHHHHHHTCEEEE
T ss_pred CCeeEEEecCCCChHHHHHHHHcCCeEEe
Confidence 578999999843 334568889987654
No 154
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=46.11 E-value=17 Score=28.20 Aligned_cols=50 Identities=14% Similarity=0.310 Sum_probs=27.6
Q ss_pred HHHHHHHHhCCCceEEEecCCHHHHHHHH---Hc--CCceeEecccccHHHHHHHhh
Q psy11337 100 CFERIVTRFGRKCTYVVIGDGQDEEAAAK---QR--NFPFWRISSRSDLAALYHALD 151 (155)
Q Consensus 100 cFerI~~RFG~k~~yvvIGDG~eEe~aAk---~~--~~PFwrI~~~~Dl~~L~~al~ 151 (155)
.|+++.++ ++++.++++|+|.+ ++-.+ ++ ++-|..--++.++..++.+.+
T Consensus 230 a~~~l~~~-~~~~~l~i~G~~~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad 284 (406)
T 2gek_A 230 ALPKLVAR-FPDVEILIVGRGDE-DELREQAGDLAGHLRFLGQVDDATKASAMRSAD 284 (406)
T ss_dssp HHHHHHTT-STTCEEEEESCSCH-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSS
T ss_pred HHHHHHHH-CCCeEEEEEcCCcH-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCC
Confidence 44455444 36899999999987 33222 22 222322223445577776654
No 155
>3d8t_A Uroporphyrinogen-III synthase; heme biosynthesis, lyase; 1.60A {Thermus thermophilus} PDB: 3d8r_A 3d8s_A 3d8n_A
Probab=45.99 E-value=34 Score=26.97 Aligned_cols=39 Identities=10% Similarity=0.239 Sum_probs=32.1
Q ss_pred CceEEEecCCHHHHHHHHHcCCceeEecccccHHHHHHHhh
Q psy11337 111 KCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDLAALYHALD 151 (155)
Q Consensus 111 k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~~L~~al~ 151 (155)
++.+++||. -..++++++|+.-..+...++..+|-.++.
T Consensus 240 ~~~i~aIG~--~TA~al~~~G~~~~~~a~~~~~~~L~~~l~ 278 (286)
T 3d8t_A 240 RVKALAVGR--VTADALREWGVKPFYVDETERLGSLLQGFK 278 (286)
T ss_dssp TSEEEEESH--HHHHHHHHTTCCCSEEECSSCHHHHHHHHH
T ss_pred CCEEEEECH--HHHHHHHHcCCCceEEeCCCCHHHHHHHHH
Confidence 678888965 578899999998887788899988887764
No 156
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=45.54 E-value=59 Score=25.61 Aligned_cols=53 Identities=9% Similarity=0.080 Sum_probs=32.5
Q ss_pred hHHHHHHHHhCCCceEEEecCCHH--------HHHHHHHcCC-ceeEec----c--cccHHHHHHHhhc
Q psy11337 99 SCFERIVTRFGRKCTYVVIGDGQD--------EEAAAKQRNF-PFWRIS----S--RSDLAALYHALDN 152 (155)
Q Consensus 99 scFerI~~RFG~k~~yvvIGDG~e--------Ee~aAk~~~~-PFwrI~----~--~~Dl~~L~~al~~ 152 (155)
..|+.+.++ ++++.++++|||.+ -++.+++++. +-+.+- . +.|+..++.+.+.
T Consensus 251 ~a~~~l~~~-~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~ 318 (416)
T 2x6q_A 251 EIYRKVKEK-IPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDV 318 (416)
T ss_dssp HHHHHHHHH-CTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSE
T ss_pred HHHHHHHHh-CCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCE
Confidence 456666655 47899999999953 1334555554 333332 1 3478888877654
No 157
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=45.37 E-value=16 Score=29.06 Aligned_cols=44 Identities=23% Similarity=0.314 Sum_probs=30.2
Q ss_pred ChhhHHHHHHHHh--CCCceEE-EecCCHH--HHHHHHHcCCceeEecc
Q psy11337 96 GKDSCFERIVTRF--GRKCTYV-VIGDGQD--EEAAAKQRNFPFWRISS 139 (155)
Q Consensus 96 GKescFerI~~RF--G~k~~yv-vIGDG~e--Ee~aAk~~~~PFwrI~~ 139 (155)
|.-+|++.|.+++ |.++.-+ ||.|..+ ..+.|+++|+|+..++.
T Consensus 14 G~Gsnl~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~~ 62 (215)
T 3tqr_A 14 GNGTNLQAIIGAIQKGLAIEIRAVISNRADAYGLKRAQQADIPTHIIPH 62 (215)
T ss_dssp SCCHHHHHHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHTTCCEEECCG
T ss_pred CCcHHHHHHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHcCCCEEEeCc
Confidence 4559999999988 3344444 4555432 24569999999998754
No 158
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=45.20 E-value=28 Score=23.01 Aligned_cols=44 Identities=5% Similarity=-0.117 Sum_probs=30.0
Q ss_pred hHHHHHHHHhCC-CceEEEecCCH---HHHHHHHHcCCceeEeccccc
Q psy11337 99 SCFERIVTRFGR-KCTYVVIGDGQ---DEEAAAKQRNFPFWRISSRSD 142 (155)
Q Consensus 99 scFerI~~RFG~-k~~yvvIGDG~---eEe~aAk~~~~PFwrI~~~~D 142 (155)
.-++++.++|+. ++.++.|.-.. +=++.++++++++|.+-..++
T Consensus 51 ~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~ 98 (148)
T 3hcz_A 51 PKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSK 98 (148)
T ss_dssp HHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTT
T ss_pred HHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccc
Confidence 447889999954 48888875332 224467888888777766554
No 159
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=45.18 E-value=27 Score=28.32 Aligned_cols=36 Identities=14% Similarity=0.272 Sum_probs=24.7
Q ss_pred HHHHHHhCCCceEEEecCCHHHHHHHHHcCCceeEecc
Q psy11337 102 ERIVTRFGRKCTYVVIGDGQDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 102 erI~~RFG~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~ 139 (155)
+.+++| |-.|.|+.-.+|.| .+...+.++||..|..
T Consensus 24 ~~L~~~-g~~V~~vg~~~g~e-~~~v~~~g~~~~~i~~ 59 (365)
T 3s2u_A 24 REFQAR-GYAVHWLGTPRGIE-NDLVPKAGLPLHLIQV 59 (365)
T ss_dssp HHHHHT-TCEEEEEECSSSTH-HHHTGGGTCCEEECC-
T ss_pred HHHHhC-CCEEEEEECCchHh-hchhhhcCCcEEEEEC
Confidence 555665 88888876666644 4556678999988764
No 160
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=45.08 E-value=92 Score=23.11 Aligned_cols=72 Identities=18% Similarity=0.172 Sum_probs=37.9
Q ss_pred hHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhC-CCc
Q psy11337 34 IESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFG-RKC 112 (155)
Q Consensus 34 ~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG-~k~ 112 (155)
++.-..+=+..++.++.....+....=|.++|..-. +-...|+++|.+-+.-.+.+...++ +.+
T Consensus 117 ~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi 181 (253)
T 3qiv_A 117 MSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---------------LYSNYYGLAKVGINGLTQQLSRELGGRNI 181 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------------------CCHHHHHHHHHHHHHHTTTTTE
T ss_pred HhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---------------CCCchhHHHHHHHHHHHHHHHHHHhhcCe
Confidence 333333434445555555544433333444443321 3345799999999999999999996 457
Q ss_pred eEEEecCC
Q psy11337 113 TYVVIGDG 120 (155)
Q Consensus 113 ~yvvIGDG 120 (155)
+..+|.-|
T Consensus 182 ~v~~v~PG 189 (253)
T 3qiv_A 182 RINAIAPG 189 (253)
T ss_dssp EEEEEEC-
T ss_pred EEEEEEec
Confidence 77777654
No 161
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=44.95 E-value=75 Score=25.94 Aligned_cols=77 Identities=10% Similarity=0.112 Sum_probs=51.0
Q ss_pred HhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhccc-ccccCccccccccChhhHHHHHHHHhCCC
Q psy11337 33 EIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSG-IFDVENIYSSTKIGKDSCFERIVTRFGRK 111 (155)
Q Consensus 33 e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~-~fpieNIYSa~k~GKescFerI~~RFG~k 111 (155)
.++.-..+=+...+.++.....+....=|.|+|.. ++.+ .+|-...|+++|.+=+.+.+.+...|+++
T Consensus 156 ~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~-----------~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~g 224 (346)
T 3kvo_A 156 MMNVNTRGTYLASKACIPYLKKSKVAHILNISPPL-----------NLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFKGE 224 (346)
T ss_dssp HHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCC-----------CCCGGGTSSSHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHH-----------HcCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCC
Confidence 34444455555566676666555444434444432 1111 24556789999999999999999999977
Q ss_pred ceEEEecCC
Q psy11337 112 CTYVVIGDG 120 (155)
Q Consensus 112 ~~yvvIGDG 120 (155)
++..+|.-|
T Consensus 225 Irvn~v~PG 233 (346)
T 3kvo_A 225 IAVNALWPK 233 (346)
T ss_dssp CEEEEEECS
T ss_pred cEEEEEeCC
Confidence 888888877
No 162
>2ftc_A Mitochondrial ribosomal protein L1; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus}
Probab=44.29 E-value=18 Score=28.30 Aligned_cols=28 Identities=18% Similarity=0.253 Sum_probs=22.4
Q ss_pred hCCCc-eEEEecCCHHHHHHHHHcCCcee
Q psy11337 108 FGRKC-TYVVIGDGQDEEAAAKQRNFPFW 135 (155)
Q Consensus 108 FG~k~-~yvvIGDG~eEe~aAk~~~~PFw 135 (155)
+|++. +-||++||.+.++.|++.+.+|.
T Consensus 28 ~~k~~~~V~Vfa~~~~~~~~Ak~aGad~v 56 (189)
T 2ftc_A 28 FASEINKVAVFTENASEVKIAEENGAAFA 56 (189)
T ss_pred CCCCCCEEEEEeCChhHHHHHHHcCCCCc
Confidence 35554 89999999776778999999874
No 163
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=43.96 E-value=23 Score=29.64 Aligned_cols=41 Identities=20% Similarity=0.600 Sum_probs=31.6
Q ss_pred hhHHHHHHHHh--CC-Cce-EEEecCCHHHHHHHHHcCCceeEec
Q psy11337 98 DSCFERIVTRF--GR-KCT-YVVIGDGQDEEAAAKQRNFPFWRIS 138 (155)
Q Consensus 98 escFerI~~RF--G~-k~~-yvvIGDG~eEe~aAk~~~~PFwrI~ 138 (155)
-+|++-|..|. |. ++. =+||++..|=.+.|+++|+||..+.
T Consensus 116 g~nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~gIp~~~~~ 160 (302)
T 3o1l_A 116 SHCLADLLHRWHSDELDCDIACVISNHQDLRSMVEWHDIPYYHVP 160 (302)
T ss_dssp CHHHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTTTCCEEECC
T ss_pred chhHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHcCCCEEEcC
Confidence 48999999987 43 333 3567777776678999999999984
No 164
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=43.93 E-value=29 Score=22.83 Aligned_cols=35 Identities=9% Similarity=0.128 Sum_probs=22.9
Q ss_pred HHHHHHHhCCCceEEEec--------CCHHHHHHHHHcCCcee
Q psy11337 101 FERIVTRFGRKCTYVVIG--------DGQDEEAAAKQRNFPFW 135 (155)
Q Consensus 101 FerI~~RFG~k~~yvvIG--------DG~eEe~aAk~~~~PFw 135 (155)
++++.++|+.++.++.|. +..+-.+.+++++++|-
T Consensus 51 l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (148)
T 2b5x_A 51 VNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQP 93 (148)
T ss_dssp HHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSC
T ss_pred HHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcc
Confidence 677888897668888886 22233345666666654
No 165
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=43.29 E-value=11 Score=25.90 Aligned_cols=38 Identities=16% Similarity=0.235 Sum_probs=28.0
Q ss_pred ChhhHHHHHHHHhCCCceEEEecCCHHHHHHHHHcCCceeEec
Q psy11337 96 GKDSCFERIVTRFGRKCTYVVIGDGQDEEAAAKQRNFPFWRIS 138 (155)
Q Consensus 96 GKescFerI~~RFG~k~~yvvIGDG~eEe~aAk~~~~PFwrI~ 138 (155)
+|....+++ +.-.-++|||+..--++|+..+++++-.+
T Consensus 140 ~k~~~l~~l-----~~~~~i~iGD~~~Di~~~~~ag~~v~~~~ 177 (201)
T 4ap9_A 140 DKGEFLKRF-----RDGFILAMGDGYADAKMFERADMGIAVGR 177 (201)
T ss_dssp CHHHHHGGG-----TTSCEEEEECTTCCHHHHHHCSEEEEESS
T ss_pred CHHHHHHhc-----CcCcEEEEeCCHHHHHHHHhCCceEEECC
Confidence 355554444 45566788999999999999999976543
No 166
>3llu_A RAS-related GTP-binding protein C; structural genomics consortium, SGC, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; HET: GNP; 1.40A {Homo sapiens} PDB: 2q3f_A*
Probab=42.74 E-value=41 Score=23.96 Aligned_cols=53 Identities=9% Similarity=0.107 Sum_probs=34.4
Q ss_pred ccccccc---ChhhHHHHHHHH--hCCCceEEEecCCHH------------------HHHHHH----HcCCceeEecccc
Q psy11337 89 IYSSTKI---GKDSCFERIVTR--FGRKCTYVVIGDGQD------------------EEAAAK----QRNFPFWRISSRS 141 (155)
Q Consensus 89 IYSa~k~---GKescFerI~~R--FG~k~~yvvIGDG~e------------------Ee~aAk----~~~~PFwrI~~~~ 141 (155)
+|+++.. .-+...+++.+- ..+++..++||.-.| .++-|+ .+++||..+|+..
T Consensus 102 v~d~~~~~~~~~~~~~~~l~~~~~~~~~~piilv~nK~Dl~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~e~Sa~~ 181 (196)
T 3llu_A 102 VIDAQDDYMEALTRLHITVSKAYKVNPDMNFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYD 181 (196)
T ss_dssp EEETTSCCHHHHHHHHHHHHHHHHHCTTCEEEEEEECGGGSCHHHHHHHHHHHHHHHHHHHHHTTCTTSCEEEEEECTTS
T ss_pred EEECCCchHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCchhhhhHHHhHHHHHHHHHHHHhhhhcCCcceEEEEech
Confidence 4555542 234444555553 467899999998777 122345 6789999999864
No 167
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=42.73 E-value=38 Score=23.32 Aligned_cols=42 Identities=7% Similarity=0.212 Sum_probs=27.7
Q ss_pred HHHHHHHhCC---CceEEEecC-----CHHH-HHHHHHcCCce--eEeccccc
Q psy11337 101 FERIVTRFGR---KCTYVVIGD-----GQDE-EAAAKQRNFPF--WRISSRSD 142 (155)
Q Consensus 101 FerI~~RFG~---k~~yvvIGD-----G~eE-e~aAk~~~~PF--wrI~~~~D 142 (155)
+.++.++|+. ++.++.|.- ..++ .+-+++++++| |.+-+.+|
T Consensus 56 l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~ 108 (174)
T 1xzo_A 56 MTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYS 108 (174)
T ss_dssp HHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSC
T ss_pred HHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCC
Confidence 6777888842 499999973 3333 23567788877 77666554
No 168
>3ch4_B Pmkase, phosphomevalonate kinase; parallel beta-sheet with the strand order 23145, walker A motif, cholesterol biosynthesis, lipid synthesis; 1.76A {Homo sapiens}
Probab=42.50 E-value=16 Score=28.96 Aligned_cols=45 Identities=27% Similarity=0.440 Sum_probs=33.9
Q ss_pred cccccChhhHHHHHHHHhCC-CceEEEecCCHHHHHHHHHcCCceeE
Q psy11337 91 SSTKIGKDSCFERIVTRFGR-KCTYVVIGDGQDEEAAAKQRNFPFWR 136 (155)
Q Consensus 91 Sa~k~GKescFerI~~RFG~-k~~yvvIGDG~eEe~aAk~~~~PFwr 136 (155)
+-.+.||-.|-+.++++||. ++..+.+||-..|+. |+++|.++=+
T Consensus 18 Gk~~SGKd~va~~l~~~~g~~~~~vv~msD~iK~~~-a~~~gl~~~~ 63 (202)
T 3ch4_B 18 GKRKSGKDFVTEALQSRLGADVCAVLRLSGPLKEQY-AQEHGLNFQR 63 (202)
T ss_dssp ECTTSSHHHHHHHHHHHHCTTTEEEECTHHHHHHHH-HHTTTCCCC-
T ss_pred CCCCCChHHHHHHHHHHcCCCCceEEEccHHHHHHH-HHHcCCCchh
Confidence 34568999999999999975 477788899887555 6677766543
No 169
>3qoy_A 50S ribosomal protein L1; beta-alpha-beta, structural constituent of ribosome, rRNA BI regulation of translation, translation, ribosomal RNA; 2.10A {Aquifex aeolicus}
Probab=42.32 E-value=16 Score=30.00 Aligned_cols=27 Identities=19% Similarity=0.335 Sum_probs=22.8
Q ss_pred CCCceEEEecCCHHHHHHHHHcCCceeE
Q psy11337 109 GRKCTYVVIGDGQDEEAAAKQRNFPFWR 136 (155)
Q Consensus 109 G~k~~yvvIGDG~eEe~aAk~~~~PFwr 136 (155)
|++.+-||++|| |.++.|+..|.+|+=
T Consensus 73 gk~~kV~Vfa~~-~~~~eAk~aGad~vg 99 (242)
T 3qoy_A 73 GKPIKVVVFAEG-EYAKKAEEAGADYVG 99 (242)
T ss_dssp SSCCCEEEECCH-HHHHHHHHTTCSEEE
T ss_pred CCCcEEEEEcCH-HHHHHHHHcCCCEEC
Confidence 678999999998 567788999999764
No 170
>1g16_A RAS-related protein SEC4; G protein RAB, signaling protein, endocytosis/exocytosis complex; HET: GDP; 1.80A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1g17_A* 2ocy_C 2eqb_A
Probab=42.27 E-value=66 Score=21.49 Aligned_cols=52 Identities=21% Similarity=0.464 Sum_probs=34.0
Q ss_pred hHHHHHHHHhCCCceEEEecCCHH----------HHHHHHHcCCceeEecccc--cHHHHHHHh
Q psy11337 99 SCFERIVTRFGRKCTYVVIGDGQD----------EEAAAKQRNFPFWRISSRS--DLAALYHAL 150 (155)
Q Consensus 99 scFerI~~RFG~k~~yvvIGDG~e----------Ee~aAk~~~~PFwrI~~~~--Dl~~L~~al 150 (155)
..++.+.+..+++..+++||.-.| -++-|+.+++||+.+|+.. .+..+...+
T Consensus 96 ~~~~~i~~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~gv~~l~~~l 159 (170)
T 1g16_A 96 QWFKTVNEHANDEAQLLLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTL 159 (170)
T ss_dssp HHHHHHHHHSCTTCEEEEEEECTTCTTCCSCHHHHHHHHHHHTCCEEECBTTTTBSHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEEEECccCCcCccCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHH
Confidence 344555555567788888875433 1345788899999999854 455555443
No 171
>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile}
Probab=41.21 E-value=76 Score=24.81 Aligned_cols=58 Identities=9% Similarity=0.093 Sum_probs=39.5
Q ss_pred ccccccChhhHHHHHHHHh--CCCceEEEecC------CHHHHHHHHHcCCceeEecccccHHHHH
Q psy11337 90 YSSTKIGKDSCFERIVTRF--GRKCTYVVIGD------GQDEEAAAKQRNFPFWRISSRSDLAALY 147 (155)
Q Consensus 90 YSa~k~GKescFerI~~RF--G~k~~yvvIGD------G~eEe~aAk~~~~PFwrI~~~~Dl~~L~ 147 (155)
++......++..++|.++- |+++.+++.|| |.++-+++++.++|+--|--=+.+.+.-
T Consensus 56 ~~~~~~~~~~~~~~i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~veviPGiSS~~aa~ 121 (253)
T 4e16_A 56 HNSAHMDLQEIIDVMREGIENNKSVVRLQTGDFSIYGSIREQVEDLNKLNIDYDCTPGVSSFLGAA 121 (253)
T ss_dssp EEGGGCCHHHHHHHHHHHHHTTCCEEEEESBCTTTTCCHHHHHHHHHHHTCCEEEECCCCHHHHHH
T ss_pred EecCCCCHHHHHHHHHHHHHCCCcEEEEeCCCCccccCHHHHHHHHHHCCCCEEEECCHHHHHHHH
Confidence 3333444567788888765 99999999998 4566677777788876655544444433
No 172
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=41.03 E-value=15 Score=30.13 Aligned_cols=49 Identities=12% Similarity=0.154 Sum_probs=33.3
Q ss_pred hhhHHHHHHHHhCCCceEEEecCCHHHHHHHHHcCC----ceeEecccccHHHHHHHhhc
Q psy11337 97 KDSCFERIVTRFGRKCTYVVIGDGQDEEAAAKQRNF----PFWRISSRSDLAALYHALDN 152 (155)
Q Consensus 97 KescFerI~~RFG~k~~yvvIGDG~eEe~aAk~~~~----PFwrI~~~~Dl~~L~~al~~ 152 (155)
|-- |+.+.++ ++++++++||||. +++++. -|.---.+.|+.+++.+.+.
T Consensus 235 Kg~-~~~l~~~-~~~~~l~ivG~g~-----~~~~~l~~~V~f~G~~~~~~l~~~~~~adv 287 (406)
T 2hy7_A 235 PEF-FVVASKA-FPQVTFHVIGSGM-----GRHPGYGDNVIVYGEMKHAQTIGYIKHARF 287 (406)
T ss_dssp HHH-HHHHHHH-CTTEEEEEESCSS-----CCCTTCCTTEEEECCCCHHHHHHHHHTCSE
T ss_pred cCH-HHHHHHh-CCCeEEEEEeCch-----HHhcCCCCCEEEcCCCCHHHHHHHHHhcCE
Confidence 444 8888776 5889999999996 455443 23333345678888877654
No 173
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=40.60 E-value=53 Score=21.46 Aligned_cols=52 Identities=15% Similarity=0.101 Sum_probs=29.7
Q ss_pred hhhHHHHHHHHhCC-CceEEEecCCHHHHHHHHHcCCceeEecccc--cHHHHHHHh
Q psy11337 97 KDSCFERIVTRFGR-KCTYVVIGDGQDEEAAAKQRNFPFWRISSRS--DLAALYHAL 150 (155)
Q Consensus 97 KescFerI~~RFG~-k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~--Dl~~L~~al 150 (155)
-.+..++|+++ + .+..+++++..+++...+.+......+=..| +...|..++
T Consensus 73 g~~~~~~l~~~--~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~~l~~~i 127 (137)
T 2pln_A 73 ALSFVSRIKEK--HSSIVVLVSSDNPTSEEEVHAFEQGADDYIAKPYRSIKALVARI 127 (137)
T ss_dssp HHHHHHHHHHH--STTSEEEEEESSCCHHHHHHHHHTTCSEEEESSCSCHHHHHHHH
T ss_pred HHHHHHHHHhc--CCCccEEEEeCCCCHHHHHHHHHcCCceeeeCCCCCHHHHHHHH
Confidence 35778888887 6 7888888776655554444433333222223 455555544
No 174
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=40.23 E-value=46 Score=27.37 Aligned_cols=50 Identities=18% Similarity=0.417 Sum_probs=38.5
Q ss_pred hhhHHHHHHHHh---CCCceEEEecCCHHHHHHHHHcCCc----eeEecccccHHHHHHHh
Q psy11337 97 KDSCFERIVTRF---GRKCTYVVIGDGQDEEAAAKQRNFP----FWRISSRSDLAALYHAL 150 (155)
Q Consensus 97 KescFerI~~RF---G~k~~yvvIGDG~eEe~aAk~~~~P----FwrI~~~~Dl~~L~~al 150 (155)
.-..|++...+| |. ..||.+|.|-|+. |.++.+| ++-|+ +|+..+...++
T Consensus 87 Rt~~~d~~v~~~~~~g~-~QvV~LGaGlDTr--a~Rl~~~~~~~v~evD-~P~vi~~k~~l 143 (310)
T 2uyo_A 87 RTNFFDTYFNNAVIDGI-RQFVILASGLDSR--AYRLDWPTGTTVYEID-QPKVLAYKSTT 143 (310)
T ss_dssp HHHHHHHHHHHHHHTTC-CEEEEETCTTCCH--HHHSCCCTTCEEEEEE-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCC-CeEEEeCCCCCch--hhhccCCCCcEEEEcC-CHHHHHHHHHH
Confidence 445788888888 44 5799999999998 7777654 66777 78888877665
No 175
>2cok_A Poly [ADP-ribose] polymerase-1; BRCT domain, DNA repair, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2le0_A
Probab=40.22 E-value=13 Score=27.00 Aligned_cols=29 Identities=7% Similarity=0.054 Sum_probs=20.9
Q ss_pred CCceEEEecCC----HHHHHHHHHcCCceeEec
Q psy11337 110 RKCTYVVIGDG----QDEEAAAKQRNFPFWRIS 138 (155)
Q Consensus 110 ~k~~yvvIGDG----~eEe~aAk~~~~PFwrI~ 138 (155)
+|.+|+|+|+. ..--+-|+++++|.+.-.
T Consensus 46 kkT~~lV~g~~~e~~gsKl~kA~~lgI~IvsE~ 78 (113)
T 2cok_A 46 KASLCISTKKEVEKMNKKMEEVKEANIRVVSED 78 (113)
T ss_dssp TCSEEECCHHHHHHCCHHHHHHHHTTCCEECTH
T ss_pred cCccEEEECCCCCCCChHHHHHHHCCCcEEeHH
Confidence 57889999931 133456889999988655
No 176
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=40.02 E-value=68 Score=24.83 Aligned_cols=78 Identities=10% Similarity=0.042 Sum_probs=48.8
Q ss_pred HHhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhCC-
Q psy11337 32 AEIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFGR- 110 (155)
Q Consensus 32 ~e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG~- 110 (155)
..++.-..+-+..++.++.....+....=|.++|.. +..+.+|-...|+++|.+=+.-.+.+...+++
T Consensus 119 ~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-----------~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~ 187 (285)
T 3sc4_A 119 LMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPI-----------RLEPKWLRPTPYMMAKYGMTLCALGIAEELRDA 187 (285)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCC-----------CCSGGGSCSHHHHHHHHHHHHHHHHHHHHTGGG
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChh-----------hccCCCCCCchHHHHHHHHHHHHHHHHHHhccc
Confidence 334444445555666677666554444334444422 22233344578999999999988989888864
Q ss_pred CceEEEecCC
Q psy11337 111 KCTYVVIGDG 120 (155)
Q Consensus 111 k~~yvvIGDG 120 (155)
+++..+|.-|
T Consensus 188 gI~vn~v~PG 197 (285)
T 3sc4_A 188 GIASNTLWPR 197 (285)
T ss_dssp TCEEEEEECS
T ss_pred CcEEEEEeCC
Confidence 4777777776
No 177
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=39.92 E-value=53 Score=26.02 Aligned_cols=44 Identities=18% Similarity=0.329 Sum_probs=30.5
Q ss_pred ChhhHHHHHHHHh--CC-CceEE-EecCCHH--HHHHHHHcCCceeEecc
Q psy11337 96 GKDSCFERIVTRF--GR-KCTYV-VIGDGQD--EEAAAKQRNFPFWRISS 139 (155)
Q Consensus 96 GKescFerI~~RF--G~-k~~yv-vIGDG~e--Ee~aAk~~~~PFwrI~~ 139 (155)
|.-+|++.|.++. |. ++.-+ ||.|..+ -.+.|+++|+|+..++.
T Consensus 17 G~gsnl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~~ 66 (215)
T 3kcq_A 17 GRGSNLEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVKR 66 (215)
T ss_dssp SCCHHHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECCB
T ss_pred CCcHHHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeCc
Confidence 5569999999998 32 24433 5555433 34579999999998764
No 178
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=39.42 E-value=24 Score=27.77 Aligned_cols=40 Identities=15% Similarity=0.224 Sum_probs=33.2
Q ss_pred CCceEEEecCCHHHHHHHHHcCCceeEecccccHHHHHHHhh
Q psy11337 110 RKCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDLAALYHALD 151 (155)
Q Consensus 110 ~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~~L~~al~ 151 (155)
+++.+++||. -..++++++++.-..+...++..+|-.++.
T Consensus 238 ~~~~i~aIG~--~Ta~~l~~~G~~~~~va~~~~~~~ll~al~ 277 (286)
T 1jr2_A 238 DQIKFAAIGP--TTARALAAQGLPVSCTAESPTPQALATGIR 277 (286)
T ss_dssp GGSEEEESSH--HHHHHHHHTTCCCSEECSSSSHHHHHHHHH
T ss_pred cCCEEEEECH--HHHHHHHHcCCCceEecCCCCHHHHHHHHH
Confidence 4578888864 578899999999888888999999888774
No 179
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=39.01 E-value=1.1e+02 Score=22.91 Aligned_cols=84 Identities=11% Similarity=0.162 Sum_probs=51.8
Q ss_pred hHHHHHHHHHHhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHH
Q psy11337 23 KREEWLQLRAEIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFE 102 (155)
Q Consensus 23 ~r~~w~~lr~e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFe 102 (155)
..+.|.+. ++.-..+=+...+.++.....+....=|.++|..- .. -.|-...|+++|.+=+.--+
T Consensus 113 ~~~~~~~~---~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~-----------~~-~~~~~~~Y~asK~a~~~l~~ 177 (252)
T 3f1l_A 113 NPQVWQDV---MQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVG-----------RQ-GRANWGAYAASKFATEGMMQ 177 (252)
T ss_dssp CHHHHHHH---HHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG-----------TS-CCTTCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHH---HhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhh-----------cc-CCCCCchhHHHHHHHHHHHH
Confidence 34455443 44444444455566666654444333333444321 11 13445689999999999999
Q ss_pred HHHHHhCCCceEEEecCCH
Q psy11337 103 RIVTRFGRKCTYVVIGDGQ 121 (155)
Q Consensus 103 rI~~RFG~k~~yvvIGDG~ 121 (155)
.+...++++++..+|.-|.
T Consensus 178 ~la~e~~~~irvn~v~PG~ 196 (252)
T 3f1l_A 178 VLADEYQQRLRVNCINPGG 196 (252)
T ss_dssp HHHHHTTTTCEEEEEECCS
T ss_pred HHHHHhcCCcEEEEEecCc
Confidence 9999998888888888775
No 180
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=38.83 E-value=22 Score=28.19 Aligned_cols=44 Identities=18% Similarity=0.162 Sum_probs=30.2
Q ss_pred ChhhHHHHHHHHh--CC-CceEE-EecCCHH--HHHHHHHcCCceeEecc
Q psy11337 96 GKDSCFERIVTRF--GR-KCTYV-VIGDGQD--EEAAAKQRNFPFWRISS 139 (155)
Q Consensus 96 GKescFerI~~RF--G~-k~~yv-vIGDG~e--Ee~aAk~~~~PFwrI~~ 139 (155)
|.-+||+.|.+++ |. ++.-+ ||.|.++ ..+.|+++|+|+..++.
T Consensus 16 G~gsnl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~~ 65 (209)
T 4ds3_A 16 GGGSNMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFKR 65 (209)
T ss_dssp SCCHHHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECCG
T ss_pred CCcHHHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeCc
Confidence 4559999999998 32 23333 4555432 34579999999998864
No 181
>4id3_A DNA repair protein REV1; BRCT domain, protein binding; HET: DNA; 1.97A {Saccharomyces cerevisiae S288C}
Probab=38.69 E-value=36 Score=21.89 Aligned_cols=28 Identities=11% Similarity=0.046 Sum_probs=19.7
Q ss_pred CCceEEEecCCHHHHHHHHHcCCceeEec
Q psy11337 110 RKCTYVVIGDGQDEEAAAKQRNFPFWRIS 138 (155)
Q Consensus 110 ~k~~yvvIGDG~eEe~aAk~~~~PFwrI~ 138 (155)
++||++|+++...+ .+++..+.|+++.+
T Consensus 45 ~~~THlI~~~~~~~-K~~~~~~~~iV~~~ 72 (92)
T 4id3_A 45 KTVTHIVASNLPLK-KRIEFANYKVVSPD 72 (92)
T ss_dssp TTCCEEECSCCCHH-HHHHTTTSCEECTH
T ss_pred CceEEEEecCCCHH-HHHHcCCCCEEccc
Confidence 57999999987544 45555778777644
No 182
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=38.68 E-value=54 Score=26.23 Aligned_cols=71 Identities=10% Similarity=-0.001 Sum_probs=42.1
Q ss_pred EEEeCCCchHHHHHHHHhhcccccccCcccccccc-ChhhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCCcee
Q psy11337 61 VIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKI-GKDSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPFW 135 (155)
Q Consensus 61 VLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~-GKescFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PFw 135 (155)
|+...+.....+++.+ =.+| ++.-+.-++... .|.. +.++.++.| +-..|.++.|..|-.++++++++|++
T Consensus 63 v~~~~e~~~~~~~~~l-~~~g--~~g~~~~~~~~~~dK~~-~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~g~P~v 135 (369)
T 3aw8_A 63 VTYEFENVPVEAARRL-EGRL--PLYPPAKALEVAQDRLR-EKTFFQGLGVPTPPFHPVDGPEDLEEGLKRVGLPAL 135 (369)
T ss_dssp EEECCTTCCHHHHHHH-HHHS--CBSSCHHHHHHHTCHHH-HHHHHHHHTCCCCCEEEESSHHHHHHHHTTTCSSEE
T ss_pred EEECCCCcCHHHHHHH-HHcC--CcCCCHHHHHHhcCHHH-HHHHHHHCCCCCCCceeeCCHHHHHHHHHHcCCCEE
Confidence 4444555555666633 3455 333333333333 3554 456678888 66788888876555567788899976
No 183
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=38.14 E-value=85 Score=20.66 Aligned_cols=52 Identities=12% Similarity=0.078 Sum_probs=30.5
Q ss_pred hhHHHHHHHHhCCCceEEEecCCHHHHHHHHHcCCceeEecccc-cHHHHHHHh
Q psy11337 98 DSCFERIVTRFGRKCTYVVIGDGQDEEAAAKQRNFPFWRISSRS-DLAALYHAL 150 (155)
Q Consensus 98 escFerI~~RFG~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~-Dl~~L~~al 150 (155)
....++|++++ +.+..+++++..+++.+.+.+.....-+=..| +...|..++
T Consensus 83 ~~~~~~l~~~~-~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i 135 (146)
T 4dad_A 83 LAAIEKLSRLH-PGLTCLLVTTDASSQTLLDAMRAGVRDVLRWPLEPRALDDAL 135 (146)
T ss_dssp HHHHHHHHHHC-TTCEEEEEESCCCHHHHHHHHTTTEEEEEESSCCHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCcEEEEeCCCCHHHHHHHHHhCCceeEcCCCCHHHHHHHH
Confidence 34566777765 67778888777677666666655544332222 444444443
No 184
>2z6r_A Diphthine synthase; methyltransferase, S-adenosyl-L-methionine, transferase; HET: SAH MES; 1.50A {Pyrococcus horikoshii} PDB: 2dek_A* 1wng_A* 1vce_A* 2ed3_A* 2e4r_A* 2owg_A* 2ek3_A* 2pcm_A* 2p5c_A* 2hut_A* 2emr_A* 2el3_A* 2el0_A* 2ejk_A* 2eld_A* 2el2_A* 2eka_A* 2eh5_A* 2pcg_A* 2el1_A* ...
Probab=37.69 E-value=65 Score=25.13 Aligned_cols=50 Identities=22% Similarity=0.255 Sum_probs=35.8
Q ss_pred hhhHHHHHH-HHh-CCCceEEEecC------CHHHHHHHHHcCCceeEecccccHHHH
Q psy11337 97 KDSCFERIV-TRF-GRKCTYVVIGD------GQDEEAAAKQRNFPFWRISSRSDLAAL 146 (155)
Q Consensus 97 KescFerI~-~RF-G~k~~yvvIGD------G~eEe~aAk~~~~PFwrI~~~~Dl~~L 146 (155)
-++..++|. ++- |+++.+++.|| |.++.+.+++.++|+--|--=|.+.+.
T Consensus 63 ~~~~~~~i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~veviPGiSs~~aa 120 (265)
T 2z6r_A 63 VELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAV 120 (265)
T ss_dssp HHHHHHHHTHHHHTTSCEEEEESBCTTSSSSTHHHHHHHHHTTCCEEEECCCCHHHHG
T ss_pred HHHHHHHHHHHHhCCCcEEEEECCCCcCCCCHHHHHHHHHHCCCcEEEECChhHHHHH
Confidence 456778887 554 89999999988 677777888878776655544444444
No 185
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=37.34 E-value=89 Score=23.51 Aligned_cols=52 Identities=15% Similarity=0.270 Sum_probs=36.6
Q ss_pred hhHHHHHHHHh--CCCceEEEecCC------HHHHHHHHHcCCceeEecccccHHHHHHH
Q psy11337 98 DSCFERIVTRF--GRKCTYVVIGDG------QDEEAAAKQRNFPFWRISSRSDLAALYHA 149 (155)
Q Consensus 98 escFerI~~RF--G~k~~yvvIGDG------~eEe~aAk~~~~PFwrI~~~~Dl~~L~~a 149 (155)
++..++|.++. |+++.+++.||- .++-+++++.++++--|--=|.+.+.-.+
T Consensus 81 ~~~~~~i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~~~~~gi~v~viPGiSs~~aa~a~ 140 (232)
T 2qbu_A 81 DSAARMVAAELEDGRDVAFITLGDPSIYSTFSYLQQRIEDMGFKTEMVPGVTSFTACAAT 140 (232)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESBCTTBSCSHHHHHHHHHHTTCCEEEECCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCCCccchhHHHHHHHHHHCCCcEEEeCCccHHHHHHHH
Confidence 45667787765 899999999983 47777888888887666555554444333
No 186
>3re1_A Uroporphyrinogen-III synthetase; HEMD-like family, uroporphyrinogen III synthase, HMB, lyase; 2.50A {Pseudomonas syringae PV}
Probab=36.71 E-value=46 Score=26.01 Aligned_cols=41 Identities=17% Similarity=0.000 Sum_probs=34.3
Q ss_pred CCceEEEecCCHHHHHHHHHcCCceeEecccccHHHHHHHhhc
Q psy11337 110 RKCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDLAALYHALDN 152 (155)
Q Consensus 110 ~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~~L~~al~~ 152 (155)
+++.+++|| +-..++++++||.-..+...++..+|-.++..
T Consensus 220 ~~~~~~aIG--~~Ta~~l~~~G~~~~~va~~~t~~~l~~al~~ 260 (269)
T 3re1_A 220 AGLPLFVPS--PRVASLAQAAGARNVIDCRGASAAALLAALRD 260 (269)
T ss_dssp TTSCEEESS--HHHHHHHHHHTCSSEEECSSSSHHHHHHHHHH
T ss_pred hCCeEEEEC--HHHHHHHHHCCCCceEECCCCCHHHHHHHHHH
Confidence 467888885 56888999999998888899999999888753
No 187
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=36.67 E-value=69 Score=24.50 Aligned_cols=83 Identities=10% Similarity=0.050 Sum_probs=48.8
Q ss_pred hHHHHHHHHHHhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHH
Q psy11337 23 KREEWLQLRAEIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFE 102 (155)
Q Consensus 23 ~r~~w~~lr~e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFe 102 (155)
..+.|.+.. +.-..+=+..++.++.....+....=|.++|..- .. -.|-...|+++|.+=+.-.+
T Consensus 94 ~~~~~~~~~---~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~-----------~~-~~~~~~~Y~~sK~a~~~~~~ 158 (264)
T 2dtx_A 94 SMGEWRRII---DVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQA-----------SI-ITKNASAYVTSKHAVIGLTK 158 (264)
T ss_dssp CHHHHHHHH---HHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGG-----------TS-CCTTBHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHH---HHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchh-----------cc-CCCCchhHHHHHHHHHHHHH
Confidence 345555443 3333333444555555554443333344444321 11 13445789999999998888
Q ss_pred HHHHHhCCCceEEEecCC
Q psy11337 103 RIVTRFGRKCTYVVIGDG 120 (155)
Q Consensus 103 rI~~RFG~k~~yvvIGDG 120 (155)
.+...++++++..+|.-|
T Consensus 159 ~la~e~~~~i~vn~v~PG 176 (264)
T 2dtx_A 159 SIALDYAPLLRCNAVCPA 176 (264)
T ss_dssp HHHHHHTTTSEEEEEEEC
T ss_pred HHHHHhcCCcEEEEEEeC
Confidence 888899876888887665
No 188
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=36.55 E-value=72 Score=25.26 Aligned_cols=43 Identities=19% Similarity=0.325 Sum_probs=30.2
Q ss_pred hhhHHHHHHHHh--CC-Cce-EEEecCCH--HHHHHHHHcCCceeEecc
Q psy11337 97 KDSCFERIVTRF--GR-KCT-YVVIGDGQ--DEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 97 KescFerI~~RF--G~-k~~-yvvIGDG~--eEe~aAk~~~~PFwrI~~ 139 (155)
.-+||+-|.+++ |. ++. =+||.|.. .-.+.|+++|+|+..++.
T Consensus 12 ~Gsnl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~~ 60 (211)
T 3p9x_A 12 SGTNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALDP 60 (211)
T ss_dssp TCHHHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTTTCCEEECCG
T ss_pred CchHHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeCh
Confidence 349999999998 43 233 34566643 344679999999987764
No 189
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A
Probab=36.13 E-value=1.1e+02 Score=24.21 Aligned_cols=58 Identities=16% Similarity=0.221 Sum_probs=39.8
Q ss_pred ccccccChhhHHHHHHHHh--CCCceEEEecC------CHHHHHHHHHcCCceeEecccccHHHHH
Q psy11337 90 YSSTKIGKDSCFERIVTRF--GRKCTYVVIGD------GQDEEAAAKQRNFPFWRISSRSDLAALY 147 (155)
Q Consensus 90 YSa~k~GKescFerI~~RF--G~k~~yvvIGD------G~eEe~aAk~~~~PFwrI~~~~Dl~~L~ 147 (155)
++......++..+.|.+.- |+++.+++-|| |.++-++.++.++|+--|--=+.+.+.-
T Consensus 55 ~~~~~~~~~~~~~~i~~~~~~G~~Va~L~~GDP~iyg~~~~l~~~l~~~gi~veviPGiSs~~aaa 120 (264)
T 3ndc_A 55 VNTAPMSLDAIIDTIAEAHAAGQDVARLHSGDLSIWSAMGEQLRRLRALNIPYDVTPGVPSFAAAA 120 (264)
T ss_dssp EECTTSCHHHHHHHHHHHHHHTCCEEEEESBCTTSSCSHHHHHHHHHHTTCCEEEECCCCHHHHHH
T ss_pred EecCCCCHHHHHHHHHHHHHCCCeEEEEeCCCCccccHHHHHHHHHHhCCCCEEEeCCHHHHHHHH
Confidence 3333444677888888765 99999999998 4677777777788766555444444433
No 190
>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A*
Probab=36.06 E-value=1e+02 Score=21.11 Aligned_cols=60 Identities=12% Similarity=0.078 Sum_probs=35.5
Q ss_pred cccccccChhhHHHHHHHHhCCCceEEEecCCHHH----------HHHHHHcCCceeEecccc--cHHHHHHHh
Q psy11337 89 IYSSTKIGKDSCFERIVTRFGRKCTYVVIGDGQDE----------EAAAKQRNFPFWRISSRS--DLAALYHAL 150 (155)
Q Consensus 89 IYSa~k~GKescFerI~~RFG~k~~yvvIGDG~eE----------e~aAk~~~~PFwrI~~~~--Dl~~L~~al 150 (155)
+|+++. .++..+++.+-...++..++||.-.|. ++-|+.+++||..+|+.. .+..+...+
T Consensus 88 v~D~~~--~~~~~~~~~~~~~~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~SA~~~~~v~~l~~~l 159 (165)
T 2wji_A 88 IVDATA--LERNLYLTLQLMEMGANLLLALNKMDLAKSLGIEIDVDKLEKILGVKVVPLSAAKKMGIEELKKAI 159 (165)
T ss_dssp EEETTC--HHHHHHHHHHHHHTTCCEEEEEECHHHHHHTTCCCCHHHHHHHHTSCEEECBGGGTBSHHHHHHHH
T ss_pred EecCCc--hhHhHHHHHHHHhcCCCEEEEEEchHhccccChhhHHHHHHHHhCCCEEEEEcCCCCCHHHHHHHH
Confidence 455443 233444443322235677888876664 334678899999999843 466665544
No 191
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=35.99 E-value=79 Score=24.30 Aligned_cols=77 Identities=9% Similarity=0.045 Sum_probs=47.8
Q ss_pred HHhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhCCC
Q psy11337 32 AEIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFGRK 111 (155)
Q Consensus 32 ~e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG~k 111 (155)
..++.-..+=+..++.++.....+....=|.++|..- .. -.|-...|+++|.+=+.-.+.+...++++
T Consensus 107 ~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~-----------~~-~~~~~~~Y~asKaa~~~l~~~la~e~~~~ 174 (269)
T 3vtz_A 107 RIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQS-----------YA-ATKNAAAYVTSKHALLGLTRSVAIDYAPK 174 (269)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG-----------TS-BCTTCHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhh-----------cc-CCCCChhHHHHHHHHHHHHHHHHHHhcCC
Confidence 3344444444555566666554433333344444321 11 13445689999999999999999999888
Q ss_pred ceEEEecCC
Q psy11337 112 CTYVVIGDG 120 (155)
Q Consensus 112 ~~yvvIGDG 120 (155)
++..+|.-|
T Consensus 175 i~vn~v~PG 183 (269)
T 3vtz_A 175 IRCNAVCPG 183 (269)
T ss_dssp EEEEEEEEC
T ss_pred CEEEEEEEC
Confidence 888887654
No 192
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=35.96 E-value=5.4 Score=33.29 Aligned_cols=54 Identities=15% Similarity=0.213 Sum_probs=32.9
Q ss_pred hHHHHHHHHhCC--CceEEEecCCHHHHHHHHHcCCceeEecccccHHHHHHHhhc
Q psy11337 99 SCFERIVTRFGR--KCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDLAALYHALDN 152 (155)
Q Consensus 99 scFerI~~RFG~--k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~~L~~al~~ 152 (155)
..|.++.+++.. ++.++++|||.++++.....++-|.---++.|+.+++.+.+.
T Consensus 262 ~A~~~l~~~~~~~~~~~l~ivG~~~~~~~l~~~~~v~f~G~~~~~~l~~~~~~adv 317 (413)
T 2x0d_A 262 EALKIFVQKYDRSNEWKIISVGEKHKDIALGKGIHLNSLGKLTLEDYADLLKRSSI 317 (413)
T ss_dssp HHHHHHHHHCTTGGGCEEEEEESCCCCEEEETTEEEEEEESCCHHHHHHHHHHCCE
T ss_pred HHHHHHHHhCCCCCceEEEEEcCCchhhhcCCcCcEEEcCCCCHHHHHHHHHhCCE
Confidence 456777777632 589999999976521111112234433356788898887664
No 193
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=35.92 E-value=53 Score=21.93 Aligned_cols=42 Identities=5% Similarity=0.238 Sum_probs=26.9
Q ss_pred HHHHHHHHhC-CCceEEEecCCHHH---HHHHHHcCCceeEecccc
Q psy11337 100 CFERIVTRFG-RKCTYVVIGDGQDE---EAAAKQRNFPFWRISSRS 141 (155)
Q Consensus 100 cFerI~~RFG-~k~~yvvIGDG~eE---e~aAk~~~~PFwrI~~~~ 141 (155)
=++++.++|+ +++.++.|.-..++ .+..++.+++|+.+-..+
T Consensus 51 ~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~ 96 (152)
T 2lja_A 51 ALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGT 96 (152)
T ss_dssp HHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSS
T ss_pred HHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCc
Confidence 3678888885 56888888633232 235566778876665443
No 194
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=35.52 E-value=76 Score=24.60 Aligned_cols=51 Identities=18% Similarity=0.115 Sum_probs=25.5
Q ss_pred HHHHHHHHhCCCceEEEe-cCCHHHHHHHHHc--CCceeEec---ccccHHHHHHHhh
Q psy11337 100 CFERIVTRFGRKCTYVVI-GDGQDEEAAAKQR--NFPFWRIS---SRSDLAALYHALD 151 (155)
Q Consensus 100 cFerI~~RFG~k~~yvvI-GDG~eEe~aAk~~--~~PFwrI~---~~~Dl~~L~~al~ 151 (155)
.|+++.+++ +++.++++ |+|.+.++..+++ +-+-+++- .+.|+..++.+.+
T Consensus 220 a~~~l~~~~-~~~~lv~~~g~~~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ad 276 (376)
T 1v4v_A 220 ALKRVAEAF-PHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASL 276 (376)
T ss_dssp HHHHHHHHC-TTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEE
T ss_pred HHHHHHhhC-CCeEEEEECCCCHHHHHHHHHHhccCCCEEEECCCCHHHHHHHHHhCc
Confidence 344444443 56788875 8876333322221 22333332 3336777776654
No 195
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=35.38 E-value=58 Score=21.15 Aligned_cols=53 Identities=15% Similarity=0.102 Sum_probs=28.6
Q ss_pred hhHHHHHHHHhCCCceEEEecCCHHHHHHHHHcCCceeEecc-cccHHHHHHHh
Q psy11337 98 DSCFERIVTRFGRKCTYVVIGDGQDEEAAAKQRNFPFWRISS-RSDLAALYHAL 150 (155)
Q Consensus 98 escFerI~~RFG~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~-~~Dl~~L~~al 150 (155)
.+..++|+++..+.+..+++++..+++.+.+.+...+..+=. --+...|..++
T Consensus 68 ~~~~~~l~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i 121 (136)
T 3hdv_A 68 LDLIRTIRASERAALSIIVVSGDTDVEEAVDVMHLGVVDFLLKPVDLGKLLELV 121 (136)
T ss_dssp HHHHHHHHTSTTTTCEEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCChHHHHHHHhCCcceEEeCCCCHHHHHHHH
Confidence 455677777645677777777766665554444333332222 22445554444
No 196
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=35.05 E-value=61 Score=21.82 Aligned_cols=37 Identities=5% Similarity=-0.024 Sum_probs=24.1
Q ss_pred hHHHHHHHHhC-CCceEEEec--------CCHHHH-HHHHHcCCcee
Q psy11337 99 SCFERIVTRFG-RKCTYVVIG--------DGQDEE-AAAKQRNFPFW 135 (155)
Q Consensus 99 scFerI~~RFG-~k~~yvvIG--------DG~eEe-~aAk~~~~PFw 135 (155)
.-++++.++|+ +++.++.|. |..++- +.+++++++|-
T Consensus 51 ~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (160)
T 3lor_A 51 PQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFP 97 (160)
T ss_dssp HHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSC
T ss_pred HHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCc
Confidence 35677888995 559999885 444433 35667777753
No 197
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=34.52 E-value=73 Score=21.25 Aligned_cols=52 Identities=13% Similarity=0.026 Sum_probs=29.5
Q ss_pred hhHHHHHHHHhCCCceEEEecCCHHHHHHHHHcCCceeEecccc-cHHHHHHHh
Q psy11337 98 DSCFERIVTRFGRKCTYVVIGDGQDEEAAAKQRNFPFWRISSRS-DLAALYHAL 150 (155)
Q Consensus 98 escFerI~~RFG~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~-Dl~~L~~al 150 (155)
.+..++|++++ +.+..+++++..+++.+.+.+...+.-+=..| +...|..++
T Consensus 82 ~~~~~~l~~~~-~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i 134 (150)
T 4e7p_A 82 LEVLEWIRSEK-LETKVVVVTTFKRAGYFERAVKAGVDAYVLKERSIADLMQTL 134 (150)
T ss_dssp HHHHHHHHHTT-CSCEEEEEESCCCHHHHHHHHHTTCSEEEETTSCHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCeEEEEeCCCCHHHHHHHHHCCCcEEEecCCCHHHHHHHH
Confidence 45667777764 77788888877666655544444333322222 444444443
No 198
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=34.32 E-value=93 Score=20.04 Aligned_cols=34 Identities=15% Similarity=0.170 Sum_probs=21.2
Q ss_pred hhHHHHHHHHhCCCceEEEecCCHHHHHHHHHcCCc
Q psy11337 98 DSCFERIVTRFGRKCTYVVIGDGQDEEAAAKQRNFP 133 (155)
Q Consensus 98 escFerI~~RFG~k~~yvvIGDG~eEe~aAk~~~~P 133 (155)
.+..++|+++ +.+..+++++..+++...+.+...
T Consensus 71 ~~~~~~l~~~--~~~~ii~ls~~~~~~~~~~~~~~g 104 (140)
T 3cg0_A 71 VETAARLAAG--CNLPIIFITSSQDVETFQRAKRVN 104 (140)
T ss_dssp HHHHHHHHHH--SCCCEEEEECCCCHHHHHHHHTTC
T ss_pred HHHHHHHHhC--CCCCEEEEecCCCHHHHHHHHhcC
Confidence 4566777777 667777777666665544444433
No 199
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=34.19 E-value=18 Score=29.94 Aligned_cols=43 Identities=16% Similarity=0.468 Sum_probs=32.2
Q ss_pred hhhHHHHHHHHh--CC-Cce-EEEecCC-HHHHHHHHHcCCceeEecc
Q psy11337 97 KDSCFERIVTRF--GR-KCT-YVVIGDG-QDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 97 KescFerI~~RF--G~-k~~-yvvIGDG-~eEe~aAk~~~~PFwrI~~ 139 (155)
.-+|++.|..|. |. ++. =+||+|. .+=.+.|+++|+||..+..
T Consensus 99 ~g~nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~~~gIp~~~~~~ 146 (288)
T 3obi_A 99 SDHCLADILYRWRVGDLHMIPTAIVSNHPRETFSGFDFGDIPFYHFPV 146 (288)
T ss_dssp CCHHHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTTTTTCCEEECCC
T ss_pred CCCCHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHHHcCCCEEEeCC
Confidence 349999999998 53 233 4567777 6666679999999998853
No 200
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=34.06 E-value=1.4e+02 Score=21.95 Aligned_cols=81 Identities=11% Similarity=0.179 Sum_probs=50.2
Q ss_pred HHHHHhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHh
Q psy11337 29 QLRAEIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRF 108 (155)
Q Consensus 29 ~lr~e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RF 108 (155)
++...++.-..+-+..++.++.....+... .|+.+++.. +.. -.|-...|+++|.+=+.-.+.+..++
T Consensus 118 ~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-~iv~isS~~----------~~~-~~~~~~~Y~~sK~a~~~~~~~la~e~ 185 (247)
T 3i1j_A 118 DFMQVMHVNVNATFMLTRALLPLLKRSEDA-SIAFTSSSV----------GRK-GRANWGAYGVSKFATEGLMQTLADEL 185 (247)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHTTSSSE-EEEEECCGG----------GTS-CCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhCCCC-eEEEEcchh----------hcC-CCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 334445555555556666677666544433 344333321 111 13445689999999999999999999
Q ss_pred -C-CCceEEEecCCH
Q psy11337 109 -G-RKCTYVVIGDGQ 121 (155)
Q Consensus 109 -G-~k~~yvvIGDG~ 121 (155)
+ +.++..+|.-|.
T Consensus 186 ~~~~~i~v~~v~PG~ 200 (247)
T 3i1j_A 186 EGVTAVRANSINPGA 200 (247)
T ss_dssp TTTSSEEEEEEECCC
T ss_pred cCCCCeEEEEEecCc
Confidence 4 568888877664
No 201
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=33.89 E-value=58 Score=28.15 Aligned_cols=56 Identities=20% Similarity=0.342 Sum_probs=36.7
Q ss_pred hhhHHHHHHHHhC---CCceEEEecC-----CHHH----H---HHHHHcC-------C-ceeEec---ccccHHHHHHHh
Q psy11337 97 KDSCFERIVTRFG---RKCTYVVIGD-----GQDE----E---AAAKQRN-------F-PFWRIS---SRSDLAALYHAL 150 (155)
Q Consensus 97 KescFerI~~RFG---~k~~yvvIGD-----G~eE----e---~aAk~~~-------~-PFwrI~---~~~Dl~~L~~al 150 (155)
+...|+++.+++- .++++|+||+ |.+. + +.++..| | |..-+. ++.|+.++|.+.
T Consensus 273 ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~A 352 (482)
T 1uqt_A 273 RFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYS 352 (482)
T ss_dssp HHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHc
Confidence 6889999998872 3799999984 4321 1 1233322 2 444343 578899999987
Q ss_pred hc
Q psy11337 151 DN 152 (155)
Q Consensus 151 ~~ 152 (155)
|.
T Consensus 353 Dv 354 (482)
T 1uqt_A 353 DV 354 (482)
T ss_dssp SE
T ss_pred cE
Confidence 74
No 202
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=33.69 E-value=1.3e+02 Score=22.41 Aligned_cols=103 Identities=12% Similarity=0.118 Sum_probs=56.5
Q ss_pred HHhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhC-C
Q psy11337 32 AEIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFG-R 110 (155)
Q Consensus 32 ~e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG-~ 110 (155)
..++.-..+=+..++.++.....+....=|.++|..-. . -.|-...|+++|.+=+.-.+.+...++ +
T Consensus 117 ~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~-----------~-~~~~~~~Y~asK~a~~~~~~~la~e~~~~ 184 (256)
T 3ezl_A 117 AVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQ-----------K-GQFGQTNYSTAKAGIHGFTMSLAQEVATK 184 (256)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGG-----------G-SCSCCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhc-----------c-CCCCCcccHHHHHHHHHHHHHHHHHHHHh
Confidence 33444444444455555655544333333344442211 1 124456899999999999999999885 4
Q ss_pred CceEEEecCCH----------HHHHHHHHcCCceeEecccccHHHH
Q psy11337 111 KCTYVVIGDGQ----------DEEAAAKQRNFPFWRISSRSDLAAL 146 (155)
Q Consensus 111 k~~yvvIGDG~----------eEe~aAk~~~~PFwrI~~~~Dl~~L 146 (155)
+++..+|.-|. ++.........|.-+...-.|+...
T Consensus 185 gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 230 (256)
T 3ezl_A 185 GVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSI 230 (256)
T ss_dssp TEEEEEEEECSBCCHHHHTSCHHHHHHHHHHSTTSSCBCHHHHHHH
T ss_pred CCEEEEEEECcccCccccccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 57777776441 2222222234566666555555543
No 203
>1ek0_A Protein (GTP-binding protein YPT51); vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase; HET: MHO GNP GDP; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=33.47 E-value=1.1e+02 Score=20.37 Aligned_cols=51 Identities=12% Similarity=0.384 Sum_probs=34.5
Q ss_pred HHHHHHHhCCCceEEEecCCHHH--------------HHHHHHcCCceeEecccc--cHHHHHHHhh
Q psy11337 101 FERIVTRFGRKCTYVVIGDGQDE--------------EAAAKQRNFPFWRISSRS--DLAALYHALD 151 (155)
Q Consensus 101 FerI~~RFG~k~~yvvIGDG~eE--------------e~aAk~~~~PFwrI~~~~--Dl~~L~~al~ 151 (155)
++.+.+..++++.+++||.-.|- ++-|+..++||..+|+.. .+..+...+.
T Consensus 98 ~~~~~~~~~~~~piilv~nK~Dl~~~~~~~~v~~~~~~~~~~~~~~~~~~~Sa~~~~gi~~l~~~l~ 164 (170)
T 1ek0_A 98 VKELHEQASKDIIIALVGNKIDXLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIG 164 (170)
T ss_dssp HHHHHHHSCTTCEEEEEEECGGGGGSSCCCCSCHHHHHHHHHHHTCEEEECCTTTCTTHHHHHHHHH
T ss_pred HHHHHHhcCCCCcEEEEEECCCccccccccCCCHHHHHHHHHHcCCEEEEEeCCCCCCHHHHHHHHH
Confidence 44555555778888888765442 335677899999999854 4666666553
No 204
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=33.43 E-value=67 Score=21.05 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=21.1
Q ss_pred hhHHHHHHHHhCCCceEEEecCCHHHHHHHHHcC
Q psy11337 98 DSCFERIVTRFGRKCTYVVIGDGQDEEAAAKQRN 131 (155)
Q Consensus 98 escFerI~~RFG~k~~yvvIGDG~eEe~aAk~~~ 131 (155)
.+..++|++++ +.+..+++++..+++.+.+.+.
T Consensus 68 ~~~~~~l~~~~-~~~~ii~~s~~~~~~~~~~~~~ 100 (136)
T 3kto_A 68 IELLETLVKRG-FHLPTIVMASSSDIPTAVRAMR 100 (136)
T ss_dssp HHHHHHHHHTT-CCCCEEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHHhCC-CCCCEEEEEcCCCHHHHHHHHH
Confidence 35567777775 7777788777666655444443
No 205
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=33.23 E-value=2.3e+02 Score=24.34 Aligned_cols=74 Identities=15% Similarity=0.234 Sum_probs=45.8
Q ss_pred EEEeCCCchHHHHHHHHhhccccccc------Ccccccc-----ccChhhHHHHHHHHhCCCceEEEecCCHHHHHHHHH
Q psy11337 61 VIVITTQLIPALSKIMLFGLSGIFDV------ENIYSST-----KIGKDSCFERIVTRFGRKCTYVVIGDGQDEEAAAKQ 129 (155)
Q Consensus 61 VLVTt~qLVpaLaK~LLygL~~~fpi------eNIYSa~-----k~GKescFerI~~RFG~k~~yvvIGDG~eEe~aAk~ 129 (155)
+|.+.+.++-++++.| -.||--... ...|... .+|-..=+|....+.++. ++||+.. |...|++
T Consensus 317 ~i~~~~~~~~~l~~~L-~elGm~vv~~~~~~~~~~~~~~~~~~v~~~D~~~le~~i~~~~pD---llig~~~-~~~~a~k 391 (458)
T 3pdi_B 317 AIAADPDLLLGFDALL-RSMGAHTVAAVVPARAAALVDSPLPSVRVGDLEDLEHAARAGQAQ---LVIGNSH-ALASARR 391 (458)
T ss_dssp EEECCHHHHHHHHHHH-HTTTCEEEEEEESSCCSCCTTTTSSCEEESHHHHHHHHHHHHTCS---EEEECTT-HHHHHHH
T ss_pred EEECCcHHHHHHHHHH-HHCCCEEEEEEECCCChhhhhCccCcEEeCCHHHHHHHHHhcCCC---EEEEChh-HHHHHHH
Confidence 3455566777899988 456543221 1122211 134445567766666655 4667774 5789999
Q ss_pred cCCceeEecc
Q psy11337 130 RNFPFWRISS 139 (155)
Q Consensus 130 ~~~PFwrI~~ 139 (155)
+++||.+|+.
T Consensus 392 ~gip~~~~gf 401 (458)
T 3pdi_B 392 LGVPLLRAGF 401 (458)
T ss_dssp TTCCEEECSS
T ss_pred cCCCEEEecC
Confidence 9999999864
No 206
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=33.03 E-value=94 Score=22.85 Aligned_cols=80 Identities=15% Similarity=0.180 Sum_probs=49.7
Q ss_pred HHHHHHhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHH
Q psy11337 28 LQLRAEIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTR 107 (155)
Q Consensus 28 ~~lr~e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~R 107 (155)
.++...++.-..+-+..++.++.....+.. .|+.+++... . .-.|-...|+++|.+=+.-.+.+...
T Consensus 94 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--~iv~isS~~~----------~-~~~~~~~~Y~asKaa~~~~~~~la~e 160 (230)
T 3guy_A 94 EQIQTLIENNLSSAINVLRELVKRYKDQPV--NVVMIMSTAA----------Q-QPKAQESTYCAVKWAVKGLIESVRLE 160 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSCC--EEEEECCGGG----------T-SCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--eEEEEeeccc----------C-CCCCCCchhHHHHHHHHHHHHHHHHH
Confidence 334444555555666666667766654443 4444443221 1 11344568999999999999999999
Q ss_pred hCC-CceEEEecCC
Q psy11337 108 FGR-KCTYVVIGDG 120 (155)
Q Consensus 108 FG~-k~~yvvIGDG 120 (155)
+++ +++..+|.-|
T Consensus 161 ~~~~gi~v~~v~PG 174 (230)
T 3guy_A 161 LKGKPMKIIAVYPG 174 (230)
T ss_dssp TTTSSCEEEEEEEC
T ss_pred HHhcCeEEEEEECC
Confidence 964 4777776544
No 207
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=32.91 E-value=8.3 Score=32.36 Aligned_cols=100 Identities=15% Similarity=0.266 Sum_probs=63.2
Q ss_pred HHHHHHHHHHhhhhcC-------------CCceEEEEeCCCch-HHHHHHHHhhccccc-ccCccccc--------cccC
Q psy11337 40 NWLSLAIKCLTLINQR-------------PSCTNVIVITTQLI-PALSKIMLFGLSGIF-DVENIYSS--------TKIG 96 (155)
Q Consensus 40 ~WLs~A~k~L~~i~~r-------------~~~vNVLVTt~qLV-paLaK~LLygL~~~f-pieNIYSa--------~k~G 96 (155)
.|-....++...+.++ ...+-++.|+.-++ |+=..+-.+|-|++. .++.+|.+ +-.|
T Consensus 166 d~~~~lq~~~d~L~s~~G~~~~~~~~~~~~~~~~~i~tN~D~~~~~~~~~~r~g~Ga~~~al~~~y~~~tg~~~~~~~~G 245 (352)
T 3kc2_A 166 DWAADIQIISDAINSENGMLNTLRNEKSGKPSIPIYFSNQDLLWANPYKLNRFGQGAFRLLVRRLYLELNGEPLQDYTLG 245 (352)
T ss_dssp CHHHHHHHHHHHHTSBTTBTTCCCSCCCSSCSSCEEESCCCSEECCSSSSCEECHHHHHHHHHHHHHHHHSSCCCCEECS
T ss_pred chHHHHHHHHHHHHhcCCCcCcccccccCCCCCeEEEECCCcccccCCCCcccCchHHHHHHHHHHHHhcCCCCCceEec
Confidence 4666666666666532 13466899998887 654344456666533 36777753 2377
Q ss_pred hhh--HHH----HHHH------------------HhC------CCceEEEecCCHH-HHHHHHHcCCceeEecc
Q psy11337 97 KDS--CFE----RIVT------------------RFG------RKCTYVVIGDGQD-EEAAAKQRNFPFWRISS 139 (155)
Q Consensus 97 Kes--cFe----rI~~------------------RFG------~k~~yvvIGDG~e-Ee~aAk~~~~PFwrI~~ 139 (155)
|-+ -|+ ++.+ ++| +.-.-++|||..+ --++|++.||.-+-|..
T Consensus 246 KP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~ 319 (352)
T 3kc2_A 246 KPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKT 319 (352)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSS
T ss_pred CCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEcc
Confidence 743 233 2221 232 3468899999996 68899999999877765
No 208
>1cbf_A Cobalt-precorrin-4 transmethylase; precorrin-4 methyltransferase, cobalamin biosynth methyltransferase; HET: SAH; 2.40A {Bacillus megaterium} SCOP: c.90.1.1 PDB: 2cbf_A*
Probab=32.84 E-value=1.6e+02 Score=23.32 Aligned_cols=52 Identities=13% Similarity=0.177 Sum_probs=37.0
Q ss_pred cChhhHHHHHHHHh--CCCceEEEecC------CHHHHHHHHHcCCceeEecccccHHHH
Q psy11337 95 IGKDSCFERIVTRF--GRKCTYVVIGD------GQDEEAAAKQRNFPFWRISSRSDLAAL 146 (155)
Q Consensus 95 ~GKescFerI~~RF--G~k~~yvvIGD------G~eEe~aAk~~~~PFwrI~~~~Dl~~L 146 (155)
...++..++|.++- |+++.+++-|| |.++.+.+++.++|+--|--=+.+.+.
T Consensus 77 ~~~~~~~~~i~~~~~~g~~Vv~L~~GDP~i~g~~~~l~~~l~~~gi~veviPGiSS~~aa 136 (285)
T 1cbf_A 77 MHLEEMVGTMLDRMREGKMVVRVHTGDPAMYGAIMEQMVLLKREGVDIEIVPGVTSVFAA 136 (285)
T ss_dssp CCHHHHHHHHHHHHTTTCCEEEEESBCTTTTCCCHHHHHHHHHTTCEEEEECCCCHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCeEEEEeCCCccccccHHHHHHHHHHCCCcEEEECCchHHHHH
Confidence 34577788998875 89999999998 567777777777776555444444433
No 209
>3u42_A 50S ribosomal protein L1; rossmann fold, rRNA binding, RNA binding; 1.35A {Thermus thermophilus} PDB: 3u56_A 3u4m_A 1eg0_N 1vsp_A 2hgj_C 2hgq_C 2hgu_C 1vsa_A 4f9t_A* 4abs_C 3zvp_C 1zho_A 1ml5_c* 1yl3_C 1giy_C 3umy_A 2hw8_A 2j01_C 2j03_C 2om7_K* ...
Probab=32.78 E-value=37 Score=27.48 Aligned_cols=28 Identities=14% Similarity=0.351 Sum_probs=22.8
Q ss_pred hCCCceEEEecCCHHHHHHHHHcCCceeE
Q psy11337 108 FGRKCTYVVIGDGQDEEAAAKQRNFPFWR 136 (155)
Q Consensus 108 FG~k~~yvvIGDG~eEe~aAk~~~~PFwr 136 (155)
+|++++-+|+++| |.++.|++.|-.|+-
T Consensus 69 ~gk~~kV~Vfa~~-~~~~eAk~aGAd~vG 96 (229)
T 3u42_A 69 LGKQVRVLAIAKG-EKIKEAEEAGADYVG 96 (229)
T ss_dssp CSTTSCEEEECCT-HHHHHHHHTTCSEEE
T ss_pred CCCceEEEEecCh-HhHHHHHhcCCceeC
Confidence 4778899999999 666679999988863
No 210
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=32.77 E-value=51 Score=22.27 Aligned_cols=38 Identities=11% Similarity=0.030 Sum_probs=25.2
Q ss_pred hHHHHHHHHhC-CCceEEEec--------CCHHH-HHHHHHcCCceeE
Q psy11337 99 SCFERIVTRFG-RKCTYVVIG--------DGQDE-EAAAKQRNFPFWR 136 (155)
Q Consensus 99 scFerI~~RFG-~k~~yvvIG--------DG~eE-e~aAk~~~~PFwr 136 (155)
.-++++.++|+ +++.++.|. |..++ .+.+++++++|--
T Consensus 49 ~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (158)
T 3eyt_A 49 PLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPV 96 (158)
T ss_dssp HHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCE
T ss_pred HHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceE
Confidence 45667889995 679998885 33333 2356777777643
No 211
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=32.77 E-value=58 Score=20.85 Aligned_cols=35 Identities=11% Similarity=0.172 Sum_probs=23.1
Q ss_pred hhhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcC
Q psy11337 97 KDSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRN 131 (155)
Q Consensus 97 KescFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~ 131 (155)
-.+..++|+++.. +.+..+++++..+++...+.+.
T Consensus 70 g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~ 105 (140)
T 1k68_A 70 GREVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSYD 105 (140)
T ss_dssp HHHHHHHHHHSTTGGGSCEEEEESCCCHHHHHHHHH
T ss_pred HHHHHHHHHcCcccccccEEEEecCCcHHHHHHHHH
Confidence 3567788888764 6777888877665555444433
No 212
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=32.41 E-value=44 Score=25.23 Aligned_cols=37 Identities=19% Similarity=0.294 Sum_probs=29.2
Q ss_pred ccChhhHHHHHHHHhCCCceEEEecCCHHHHHHHHHc--CCce
Q psy11337 94 KIGKDSCFERIVTRFGRKCTYVVIGDGQDEEAAAKQR--NFPF 134 (155)
Q Consensus 94 k~GKescFerI~~RFG~k~~yvvIGDG~eEe~aAk~~--~~PF 134 (155)
.+.|.+-.+++.+++| -++|||+.--.+.=+.. +.++
T Consensus 158 ~~~Kg~al~~l~~~~g----via~GD~~ND~~Ml~~a~~g~~v 196 (239)
T 1u02_A 158 GVNKGSAIRSVRGERP----AIIAGDDATDEAAFEANDDALTI 196 (239)
T ss_dssp TCCHHHHHHHHHTTSC----EEEEESSHHHHHHHHTTTTSEEE
T ss_pred CCCHHHHHHHHHhhCC----eEEEeCCCccHHHHHHhhCCcEE
Confidence 4679999999999999 78899997666655555 5444
No 213
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=32.26 E-value=62 Score=21.02 Aligned_cols=31 Identities=19% Similarity=0.036 Sum_probs=19.4
Q ss_pred hhHHHHHHHHhCCCceEEEecCCHHHHHHHHH
Q psy11337 98 DSCFERIVTRFGRKCTYVVIGDGQDEEAAAKQ 129 (155)
Q Consensus 98 escFerI~~RFG~k~~yvvIGDG~eEe~aAk~ 129 (155)
.+..++|++++ +.+..+++++..+++...+.
T Consensus 67 ~~~~~~l~~~~-~~~~ii~~s~~~~~~~~~~~ 97 (137)
T 3hdg_A 67 LEMLDRIKAGG-AKPYVIVISAFSEMKYFIKA 97 (137)
T ss_dssp HHHHHHHHHTT-CCCEEEECCCCCCHHHHHHH
T ss_pred HHHHHHHHhcC-CCCcEEEEecCcChHHHHHH
Confidence 45567777765 66777777776665544333
No 214
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=31.60 E-value=1.1e+02 Score=20.78 Aligned_cols=83 Identities=11% Similarity=0.143 Sum_probs=48.0
Q ss_pred EEEeCCCchHHHHHHHH----hhcccccccCc------cccccccChhhHHHHHHHHhCCCceEEEecCCHHH--HH---
Q psy11337 61 VIVITTQLIPALSKIML----FGLSGIFDVEN------IYSSTKIGKDSCFERIVTRFGRKCTYVVIGDGQDE--EA--- 125 (155)
Q Consensus 61 VLVTt~qLVpaLaK~LL----ygL~~~fpieN------IYSa~k~GKescFerI~~RFG~k~~yvvIGDG~eE--e~--- 125 (155)
++|-++..-..+++.|. |.+-++|+-+. +.+.--.| .+-++.+.++++-...++++++...+ ++
T Consensus 8 lIiGaG~~g~~l~~~l~~~~g~~vvg~~d~~~~~~g~~i~g~pV~g-~~~l~~~~~~~~id~viia~~~~~~~~~~~i~~ 86 (141)
T 3nkl_A 8 LIYGAGSAGLQLANMLRQGKEFHPIAFIDDDRKKHKTTMQGITIYR-PKYLERLIKKHCISTVLLAVPSASQVQKKVIIE 86 (141)
T ss_dssp EEECCSHHHHHHHHHHHHSSSEEEEEEECSCGGGTTCEETTEEEEC-GGGHHHHHHHHTCCEEEECCTTSCHHHHHHHHH
T ss_pred EEECCCHHHHHHHHHHHhCCCcEEEEEEECCcccCCCEecCeEEEC-HHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHH
Confidence 46777777777887775 23334443221 11111235 45678888888888888888865332 22
Q ss_pred HHHHcCCceeEecccccHHHHH
Q psy11337 126 AAKQRNFPFWRISSRSDLAALY 147 (155)
Q Consensus 126 aAk~~~~PFwrI~~~~Dl~~L~ 147 (155)
.++.+++ ++..-||+..+.
T Consensus 87 ~l~~~gv---~v~~vP~~~~~~ 105 (141)
T 3nkl_A 87 SLAKLHV---EVLTIPNLDDLV 105 (141)
T ss_dssp HHHTTTC---EEEECCCHHHHH
T ss_pred HHHHcCC---eEEECCCHHHHh
Confidence 3444555 455666666554
No 215
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=30.98 E-value=1.1e+02 Score=23.52 Aligned_cols=53 Identities=9% Similarity=-0.065 Sum_probs=28.9
Q ss_pred hHHHHHHHHhCCCceEEEe-cCCHHH-HHHHHHcC-CceeEe---cccccHHHHHHHhhc
Q psy11337 99 SCFERIVTRFGRKCTYVVI-GDGQDE-EAAAKQRN-FPFWRI---SSRSDLAALYHALDN 152 (155)
Q Consensus 99 scFerI~~RFG~k~~yvvI-GDG~eE-e~aAk~~~-~PFwrI---~~~~Dl~~L~~al~~ 152 (155)
..|+++.+++ +++.++++ |++.+. ++..+..+ .+-+++ -...|+..++.+.+.
T Consensus 227 ~a~~~l~~~~-~~~~l~i~~g~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~ 285 (384)
T 1vgv_A 227 HALADIATTH-QDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWL 285 (384)
T ss_dssp HHHHHHHHHC-TTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSE
T ss_pred HHHHHHHhhC-CCeEEEEEcCCCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHhCcE
Confidence 4455666655 67888875 766532 33322212 243444 234678888877654
No 216
>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A*
Probab=30.44 E-value=1.1e+02 Score=23.66 Aligned_cols=51 Identities=16% Similarity=0.229 Sum_probs=36.4
Q ss_pred hhHHHHHHHHh--CCCceEEEecCCH------HHHHHHHHcCCceeEecccccHHHHHH
Q psy11337 98 DSCFERIVTRF--GRKCTYVVIGDGQ------DEEAAAKQRNFPFWRISSRSDLAALYH 148 (155)
Q Consensus 98 escFerI~~RF--G~k~~yvvIGDG~------eEe~aAk~~~~PFwrI~~~~Dl~~L~~ 148 (155)
++..+.|.++. |+++.+++.||-. ++-+++++.++|+--|--=|.+.+.-.
T Consensus 83 ~~~~~~i~~~~~~g~~Va~l~~GDP~~~~~~~~l~~~l~~~gi~v~viPGiSs~~aa~a 141 (259)
T 2e0n_A 83 AANYASMAEEVQAGRRVAVVSVGDGGFYSTASAIIERARRDGLDCSMTPGIPAFIAAGS 141 (259)
T ss_dssp GGGHHHHHHHHHTTCEEEEEESBCTTBSCTHHHHHHHHHTTTCCEEEECCCCHHHHHHH
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCCCcccccHHHHHHHHHHCCCCEEEeCChhHHHHHHH
Confidence 56778888876 8999999999843 777777777877766655554444333
No 217
>2d8m_A DNA-repair protein XRCC1; parallel beta-sheet, DNA ligase III, poly(ADP-ribose) polymerase-1, DNA polymerase beta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.32 E-value=34 Score=24.31 Aligned_cols=31 Identities=10% Similarity=-0.092 Sum_probs=22.8
Q ss_pred CCCceEEEecCCH-HHHHHHHHcCCceeEecc
Q psy11337 109 GRKCTYVVIGDGQ-DEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 109 G~k~~yvvIGDG~-eEe~aAk~~~~PFwrI~~ 139 (155)
-++||++|+++.. ..-+.|+++++|.+...-
T Consensus 57 s~~~ThLI~~~~~~~K~~~A~~~gi~IV~~~W 88 (129)
T 2d8m_A 57 TRDSTHLICAFANTPKYSQVLGLGGRIVRKEW 88 (129)
T ss_dssp CTTCCEEEESSSSCHHHHHHHHHTCEEEETHH
T ss_pred CCCCeEEEecCCCChHHHHHHHCCCcEecHHH
Confidence 4689999999753 333567789999887554
No 218
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=30.30 E-value=1.7e+02 Score=21.85 Aligned_cols=79 Identities=8% Similarity=-0.000 Sum_probs=46.5
Q ss_pred HHHhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhC-
Q psy11337 31 RAEIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFG- 109 (155)
Q Consensus 31 r~e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG- 109 (155)
...++.-..+-+..++.++.....+...-.|+.+++.. +.. -.|-...|+++|.+=+...+.+...++
T Consensus 126 ~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~----------~~~-~~~~~~~Y~~sKaa~~~~~~~la~e~~~ 194 (266)
T 3o38_A 126 DRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVL----------GWR-AQHSQSHYAAAKAGVMALTRCSAIEAVE 194 (266)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGG----------GTC-CCTTCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHH----------HcC-CCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444455555666666665543333444433321 111 134467899999999999998888885
Q ss_pred CCceEEEecCC
Q psy11337 110 RKCTYVVIGDG 120 (155)
Q Consensus 110 ~k~~yvvIGDG 120 (155)
++++..+|.-|
T Consensus 195 ~gi~v~~v~PG 205 (266)
T 3o38_A 195 FGVRINAVSPS 205 (266)
T ss_dssp GTEEEEEEEEC
T ss_pred cCcEEEEEeCC
Confidence 45777766544
No 219
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=30.07 E-value=99 Score=19.91 Aligned_cols=33 Identities=15% Similarity=0.043 Sum_probs=21.4
Q ss_pred hhHHHHHHHHhCCCceEEEecCCHHHHHHHHHcC
Q psy11337 98 DSCFERIVTRFGRKCTYVVIGDGQDEEAAAKQRN 131 (155)
Q Consensus 98 escFerI~~RFG~k~~yvvIGDG~eEe~aAk~~~ 131 (155)
....++|+++ .+.+..+++++..+.+.+.+.+.
T Consensus 68 ~~~~~~l~~~-~~~~~ii~ls~~~~~~~~~~~~~ 100 (140)
T 2qr3_A 68 LFWLHEIKRQ-YRDLPVVLFTAYADIDLAVRGIK 100 (140)
T ss_dssp HHHHHHHHHH-CTTCCEEEEEEGGGHHHHHHHHH
T ss_pred HHHHHHHHhh-CcCCCEEEEECCCCHHHHHHHHH
Confidence 4667788877 46777788877666555444433
No 220
>1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ...
Probab=29.99 E-value=67 Score=25.43 Aligned_cols=43 Identities=9% Similarity=0.106 Sum_probs=26.9
Q ss_pred HHhhcccc--cccCccccccccChhhHHHHHHHHhC-CCceEEEecC
Q psy11337 76 MLFGLSGI--FDVENIYSSTKIGKDSCFERIVTRFG-RKCTYVVIGD 119 (155)
Q Consensus 76 LLygL~~~--fpieNIYSa~k~GKescFerI~~RFG-~k~~yvvIGD 119 (155)
++|+ .++ .++.+.-+-.++..++.-+..++.|. .+++.+|+||
T Consensus 166 ~~~~-~~~~~~~~g~~~~l~~it~~~l~~f~~~~y~~~~~~l~v~G~ 211 (439)
T 1pp9_B 166 AAYR-NALANSLYCPDYRIGKVTPVELHDYVQNHFTSARMALIGLGV 211 (439)
T ss_dssp HHBS-SGGGSCSSCCGGGTTTCCHHHHHHHHHHHCSGGGEEEEEESS
T ss_pred HHhc-CCCCCCccCCHHHHhhcCHHHHHHHHHHhCCCCceEEEEeCC
Confidence 4565 422 23344444445566666666666775 4799999999
No 221
>3l3e_A DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, cell cycle checkpoints, acetylation, cytoplasm, cytoskeleton, DNA damage; HET: DNA; 1.26A {Homo sapiens} PDB: 3pd7_A* 3jve_A*
Probab=29.95 E-value=40 Score=22.95 Aligned_cols=32 Identities=16% Similarity=0.114 Sum_probs=22.6
Q ss_pred hCCCceEEEecCCH----HHHHHHHHcCCceeEecc
Q psy11337 108 FGRKCTYVVIGDGQ----DEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 108 FG~k~~yvvIGDG~----eEe~aAk~~~~PFwrI~~ 139 (155)
+.++||++|.++.. ..-..|++.++|.+..+-
T Consensus 49 ~s~~~THlI~~~~~~~~~~K~~~A~~~gi~IV~~~W 84 (107)
T 3l3e_A 49 FDETVTHFIYQGRPNDTNREYKSVKERGVHIVSEHW 84 (107)
T ss_dssp CCTTCCEEECCCCTTCCCHHHHHHHHTTCEEECHHH
T ss_pred ccCCceEEEecCCCCCCCHHHHHHHHCCCeEecHHH
Confidence 44789999995422 455678889998876543
No 222
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=29.88 E-value=1.1e+02 Score=23.62 Aligned_cols=33 Identities=15% Similarity=0.300 Sum_probs=26.3
Q ss_pred ccccccccChhhHHHHHHHHhCC-CceEEEecCC
Q psy11337 88 NIYSSTKIGKDSCFERIVTRFGR-KCTYVVIGDG 120 (155)
Q Consensus 88 NIYSa~k~GKescFerI~~RFG~-k~~yvvIGDG 120 (155)
..|+++|.+=+.--+.+...+++ +++..+|.-|
T Consensus 179 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG 212 (275)
T 4imr_A 179 TAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPG 212 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEES
T ss_pred hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEec
Confidence 44999999999999999999964 5777777554
No 223
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=29.76 E-value=79 Score=23.95 Aligned_cols=79 Identities=14% Similarity=0.071 Sum_probs=45.0
Q ss_pred HHHhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhCC
Q psy11337 31 RAEIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFGR 110 (155)
Q Consensus 31 r~e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG~ 110 (155)
...++.-..+-+...+.++.....+....=|.++|.. +..+. +-...|+++|.+=+.-.+.+...+++
T Consensus 111 ~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~-----------~~~~~-~~~~~Y~asKaa~~~l~~~la~e~~~ 178 (250)
T 3nyw_A 111 RKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRA-----------AKYGF-ADGGIYGSTKFALLGLAESLYRELAP 178 (250)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------------------CCTTHHHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHH-----------hcCCC-CCCcchHHHHHHHHHHHHHHHHHhhh
Confidence 3334444444445555666655444333334444422 11112 22668999999988888888888864
Q ss_pred -CceEEEecCCH
Q psy11337 111 -KCTYVVIGDGQ 121 (155)
Q Consensus 111 -k~~yvvIGDG~ 121 (155)
+++..+|.-|.
T Consensus 179 ~gi~vn~v~PG~ 190 (250)
T 3nyw_A 179 LGIRVTTLCPGW 190 (250)
T ss_dssp GTEEEEEEEESS
T ss_pred cCcEEEEEecCc
Confidence 57777776654
No 224
>2zc2_A DNAD-like replication protein; GI 24377835, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Streptococcus mutans UA159}
Probab=29.68 E-value=37 Score=22.10 Aligned_cols=42 Identities=10% Similarity=0.139 Sum_probs=31.1
Q ss_pred CcchhhhhhcccccCChhhHHHHHHHHHHhHHhhhHHHHHHHH
Q psy11337 5 PPNETTARLDACGLLGPAKREEWLQLRAEIESVTDNWLSLAIK 47 (155)
Q Consensus 5 ~~~y~~Y~~nv~~Ll~~~~r~~w~~lr~e~e~~Td~WLs~A~k 47 (155)
+++++.|.+++|..|+|..++.-..+..+ +.+...+.-.|++
T Consensus 4 ~~l~~~~e~~~gr~ls~~e~~~i~~w~~~-~~~~~elI~~A~~ 45 (78)
T 2zc2_A 4 NALVEDFERELGRMLSPFELEDLQKTVSD-DKTDPDLVRSALR 45 (78)
T ss_dssp CHHHHHHHHHHTSCCCHHHHHHHHHHHTT-TCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHH-hCCCHHHHHHHHH
Confidence 57899999999999999888766555542 3466677776644
No 225
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=29.59 E-value=1.8e+02 Score=21.91 Aligned_cols=109 Identities=13% Similarity=0.051 Sum_probs=62.1
Q ss_pred HHHHHHHHHHhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHH
Q psy11337 24 REEWLQLRAEIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFER 103 (155)
Q Consensus 24 r~~w~~lr~e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFer 103 (155)
.+.|.+. ++.-..+=+..++.++.....+....=|.++|..- .. -.|-...|+++|.+=+.-.+.
T Consensus 109 ~~~~~~~---~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~-----------~~-~~~~~~~Y~asKaa~~~~~~~ 173 (256)
T 3gaf_A 109 MSDFEWA---FKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAG-----------EN-TNVRMASYGSSKAAVNHLTRN 173 (256)
T ss_dssp HHHHHHH---HHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGG-----------TC-CCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH---HHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHH-----------cC-CCCCchHHHHHHHHHHHHHHH
Confidence 3445443 44444444455566666554444333334444321 11 133456799999999999999
Q ss_pred HHHHhCC-CceEEEecCCH-----------HHHHHHHHcCCceeEecccccHHHHH
Q psy11337 104 IVTRFGR-KCTYVVIGDGQ-----------DEEAAAKQRNFPFWRISSRSDLAALY 147 (155)
Q Consensus 104 I~~RFG~-k~~yvvIGDG~-----------eEe~aAk~~~~PFwrI~~~~Dl~~L~ 147 (155)
+...+++ +++..+|.-|. +|.........|.-|+..-.|+....
T Consensus 174 la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~ 229 (256)
T 3gaf_A 174 IAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAA 229 (256)
T ss_dssp HHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred HHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 9999865 47777776442 22233334467777776656655443
No 226
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=29.50 E-value=88 Score=23.98 Aligned_cols=79 Identities=9% Similarity=0.051 Sum_probs=45.8
Q ss_pred HHHHHHHhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHH
Q psy11337 27 WLQLRAEIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVT 106 (155)
Q Consensus 27 w~~lr~e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~ 106 (155)
+.++...++.-..+-...+..++.....+.. .=|.++|..- . .-.|-...|+++|.+=+.-.+.+..
T Consensus 129 ~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g-~iv~isS~~~-----------~-~~~~~~~~Y~asKaal~~~~~~la~ 195 (280)
T 3nrc_A 129 REGFSIAHDISAYSFAALAKEGRSMMKNRNA-SMVALTYIGA-----------E-KAMPSYNTMGVAKASLEATVRYTAL 195 (280)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHTTTTC-EEEEEECGGG-----------T-SCCTTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-eEEEEecccc-----------c-cCCCCchhhHHHHHHHHHHHHHHHH
Confidence 3344444555555555566666666554432 2233343211 1 1134557899999998888888888
Q ss_pred HhCC-CceEEEec
Q psy11337 107 RFGR-KCTYVVIG 118 (155)
Q Consensus 107 RFG~-k~~yvvIG 118 (155)
.+++ +++..+|.
T Consensus 196 e~~~~gi~v~~v~ 208 (280)
T 3nrc_A 196 ALGEDGIKVNAVS 208 (280)
T ss_dssp HHGGGTCEEEEEE
T ss_pred HHHHcCcEEEEEe
Confidence 8854 46666663
No 227
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=29.44 E-value=83 Score=24.55 Aligned_cols=44 Identities=18% Similarity=0.203 Sum_probs=29.2
Q ss_pred ChhhHHHHHHHHh--CC-Cce-EEEecCC--HHHHHHHHHcCCceeEecc
Q psy11337 96 GKDSCFERIVTRF--GR-KCT-YVVIGDG--QDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 96 GKescFerI~~RF--G~-k~~-yvvIGDG--~eEe~aAk~~~~PFwrI~~ 139 (155)
|.-+|++.|.+++ |. +.. =.||.+- ..-.+.|+++|+|+..++.
T Consensus 9 g~gsnl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~ 58 (212)
T 1jkx_A 9 GNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIA 58 (212)
T ss_dssp SCCHHHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCG
T ss_pred CCcHHHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCc
Confidence 4448999999987 32 222 2344453 2345679999999998763
No 228
>1zsq_A Myotubularin-related protein 2; protein-phospholipid complex, hydrolase; HET: PIB; 1.82A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1zvr_A*
Probab=29.08 E-value=24 Score=32.01 Aligned_cols=38 Identities=29% Similarity=0.402 Sum_probs=26.7
Q ss_pred hHHHHHHHHHHhhh---hc--CCCceEEEEe-------CCCchHHHHHHHH
Q psy11337 39 DNWLSLAIKCLTLI---NQ--RPSCTNVIVI-------TTQLIPALSKIML 77 (155)
Q Consensus 39 d~WLs~A~k~L~~i---~~--r~~~vNVLVT-------t~qLVpaLaK~LL 77 (155)
.+||.+.+.+|+.. .. ..+..+|||- |.| |-+||++||
T Consensus 317 s~WL~~i~~iL~~a~~ia~~l~~~~~sVLvhcsdGwDrT~q-l~SLaqllL 366 (528)
T 1zsq_A 317 THWLEHIKLILAGALRIADKVESGKTSVVVHSSDGWDRTAQ-LTSLAMLML 366 (528)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECSSSSSHHHH-HHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHcCCceEEEECCCCccchHH-HHHHHHHHc
Confidence 47999888888762 11 1344778887 444 569999998
No 229
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=28.85 E-value=36 Score=26.24 Aligned_cols=48 Identities=15% Similarity=0.264 Sum_probs=37.0
Q ss_pred cccChhhHHHHHHHHhC--CCce--EEEecCCHHHHHHHHHcCCceeEeccc
Q psy11337 93 TKIGKDSCFERIVTRFG--RKCT--YVVIGDGQDEEAAAKQRNFPFWRISSR 140 (155)
Q Consensus 93 ~k~GKescFerI~~RFG--~k~~--yvvIGDG~eEe~aAk~~~~PFwrI~~~ 140 (155)
..+.|.+-.+++.+++| ..-. -++|||+.--.+..+..++++.-=+..
T Consensus 186 ~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~ 237 (275)
T 1xvi_A 186 ASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLN 237 (275)
T ss_dssp TTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC
T ss_pred CCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCC
Confidence 34679999999999998 2223 799999998888899888874433434
No 230
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=28.80 E-value=84 Score=20.10 Aligned_cols=18 Identities=11% Similarity=0.285 Sum_probs=13.4
Q ss_pred HHHHHHHhCCCceEEEecC
Q psy11337 101 FERIVTRFGRKCTYVVIGD 119 (155)
Q Consensus 101 FerI~~RFG~k~~yvvIGD 119 (155)
++++.++|+ ++.++.|..
T Consensus 47 l~~~~~~~~-~~~~~~v~~ 64 (136)
T 1zzo_A 47 VGQVAASHP-EVTFVGVAG 64 (136)
T ss_dssp HHHHHHHCT-TSEEEEEEC
T ss_pred HHHHHHHcC-CeEEEEEeC
Confidence 567777887 788888764
No 231
>1wr2_A Hypothetical protein PH1789; structural genomics, NPPSFA, national on protein structural and functional analyses; 2.00A {Pyrococcus horikoshii}
Probab=28.79 E-value=47 Score=25.41 Aligned_cols=44 Identities=11% Similarity=0.168 Sum_probs=29.6
Q ss_pred cChhhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCCce-eEecc
Q psy11337 95 IGKDSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPF-WRISS 139 (155)
Q Consensus 95 ~GKescFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PF-wrI~~ 139 (155)
..|.+ +.++.+++| +-..|.++.+..|-.++|+.+++|. .|..+
T Consensus 20 l~k~~-~k~ll~~~GIp~p~~~~~~~~~ea~~~a~~lg~PvvvKp~~ 65 (238)
T 1wr2_A 20 MVEYE-AKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVVLKLMS 65 (238)
T ss_dssp ECHHH-HHHHHHTTTCCCCCCEEESSHHHHHHHHHHHCSSEEEEEEC
T ss_pred CCHHH-HHHHHHHcCcCCCCeEEeCCHHHHHHHHHHhCCCEEEEEcc
Confidence 44554 466788898 5577777876655556788999995 34433
No 232
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=28.35 E-value=1.9e+02 Score=21.75 Aligned_cols=64 Identities=19% Similarity=0.240 Sum_probs=42.6
Q ss_pred ccCccccccccChhhHHHHHHHHhCC-CceEEEecCCH---------HHHHHHHHcCCceeEecccccHHHHHH
Q psy11337 85 DVENIYSSTKIGKDSCFERIVTRFGR-KCTYVVIGDGQ---------DEEAAAKQRNFPFWRISSRSDLAALYH 148 (155)
Q Consensus 85 pieNIYSa~k~GKescFerI~~RFG~-k~~yvvIGDG~---------eEe~aAk~~~~PFwrI~~~~Dl~~L~~ 148 (155)
|-...|+++|.+=+.-.+.+...+++ +++..+|.-|. ++.........|.-|...-.|+.....
T Consensus 172 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~~~~~~~edva~~~~ 245 (267)
T 4iiu_A 172 RGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMSMIPMKRMGQAEEVAGLAS 245 (267)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHHHHHHTCTTCSCBCHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 44567999999999999999999854 57777765331 222233334578777776667665543
No 233
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=28.28 E-value=1.7e+02 Score=22.65 Aligned_cols=105 Identities=13% Similarity=0.077 Sum_probs=58.9
Q ss_pred HHHhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhC-
Q psy11337 31 RAEIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFG- 109 (155)
Q Consensus 31 r~e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG- 109 (155)
...++.-..+=+...+.++.....+....=|.++|..-. ..-+|-...|+++|.+=+.-.+.+...++
T Consensus 111 ~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~~~~~~Y~asKaa~~~l~~~la~e~~~ 179 (280)
T 3tox_A 111 RETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGH-----------TAGFAGVAPYAASKAGLIGLVQALAVELGA 179 (280)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTT-----------TBCCTTCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhC-----------cCCCCCchhHHHHHHHHHHHHHHHHHHhhh
Confidence 334444444444555566666555444433444443211 11245567899999999999999999985
Q ss_pred CCceEEEecCCH--------------HHHHHHHHcCCceeEecccccHHHH
Q psy11337 110 RKCTYVVIGDGQ--------------DEEAAAKQRNFPFWRISSRSDLAAL 146 (155)
Q Consensus 110 ~k~~yvvIGDG~--------------eEe~aAk~~~~PFwrI~~~~Dl~~L 146 (155)
++++..+|.-|. ++....-....|.-|+..-.|+...
T Consensus 180 ~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~ 230 (280)
T 3tox_A 180 RGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEA 230 (280)
T ss_dssp TTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHH
T ss_pred cCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHH
Confidence 457777765431 1222222334566666555555543
No 234
>3cph_A RAS-related protein SEC4; RAB GTPase, prenylation, vesicular transport, cytoplasm, cytoplasmic vesicle, exocytosis, GTP-binding; HET: GDP; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=28.18 E-value=1e+02 Score=21.63 Aligned_cols=51 Identities=22% Similarity=0.464 Sum_probs=32.6
Q ss_pred hHHHHHHHHhCCCceEEEecCCHH----------HHHHHHHcCCceeEeccccc--HHHHHHH
Q psy11337 99 SCFERIVTRFGRKCTYVVIGDGQD----------EEAAAKQRNFPFWRISSRSD--LAALYHA 149 (155)
Q Consensus 99 scFerI~~RFG~k~~yvvIGDG~e----------Ee~aAk~~~~PFwrI~~~~D--l~~L~~a 149 (155)
..++.|.+..++++.+++||.-.| -++-++.+++||..+|+... +..+...
T Consensus 113 ~~~~~i~~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~gi~~l~~~ 175 (213)
T 3cph_A 113 QWFKTVNEHANDEAQLLLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFT 175 (213)
T ss_dssp HHHHHHHHHTTTCSEEEEEEECTTCSSCCSCHHHHHHHHHHHTCCEEECBTTTTBSSHHHHHH
T ss_pred HHHHHHHHhcCCCCCEEEEEECCCCcccccCHHHHHHHHHHcCCEEEEEeCCCCCCHHHHHHH
Confidence 344555555566788888875433 23467788999999998543 4444443
No 235
>1c9k_A COBU, adenosylcobinamide kinase; alpha/beta structure rossmann fold P-loop, transferase; HET: 5GP; 2.20A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1cbu_A
Probab=28.12 E-value=34 Score=26.39 Aligned_cols=38 Identities=21% Similarity=0.335 Sum_probs=27.8
Q ss_pred cccccccChhhHHHHHHHHhCCCceEEEecCCHHHHHHH
Q psy11337 89 IYSSTKIGKDSCFERIVTRFGRKCTYVVIGDGQDEEAAA 127 (155)
Q Consensus 89 IYSa~k~GKescFerI~~RFG~k~~yvvIGDG~eEe~aA 127 (155)
|++.+.-||-+-=|++..+ |.++.|+.-+-..|+|..+
T Consensus 4 V~Gg~~SGKS~~A~~la~~-~~~~~yiaT~~~~d~e~~~ 41 (180)
T 1c9k_A 4 VTGGARSGKSRHAEALIGD-APQVLYIATSQILDDEMAA 41 (180)
T ss_dssp EEECTTSSHHHHHHHHHCS-CSSEEEEECCCC------C
T ss_pred EECCCCCcHHHHHHHHHhc-CCCeEEEecCCCCCHHHHH
Confidence 6788999998888999888 9899999988776776544
No 236
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=28.09 E-value=1.5e+02 Score=22.41 Aligned_cols=82 Identities=18% Similarity=0.121 Sum_probs=49.6
Q ss_pred HHHHHHHHHHhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHH
Q psy11337 24 REEWLQLRAEIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFER 103 (155)
Q Consensus 24 r~~w~~lr~e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFer 103 (155)
.+.|.+ .++.-..+=+...+.++.....+....=|.++|..-. .-.|-...|+++|.+=+.-.+.
T Consensus 106 ~~~~~~---~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~------------~~~~~~~~Y~asKaa~~~l~~~ 170 (267)
T 3t4x_A 106 DEDWFK---LFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAI------------MPSQEMAHYSATKTMQLSLSRS 170 (267)
T ss_dssp HHHHHH---HHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGT------------SCCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHH---HHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhc------------cCCCcchHHHHHHHHHHHHHHH
Confidence 345543 3444444545555666666544443333344443211 1134456899999999999999
Q ss_pred HHHHhCC-CceEEEecCC
Q psy11337 104 IVTRFGR-KCTYVVIGDG 120 (155)
Q Consensus 104 I~~RFG~-k~~yvvIGDG 120 (155)
+...+++ +++..+|.-|
T Consensus 171 la~e~~~~gi~vn~v~PG 188 (267)
T 3t4x_A 171 LAELTTGTNVTVNTIMPG 188 (267)
T ss_dssp HHHHTTTSEEEEEEEEEC
T ss_pred HHHHhCCCCeEEEEEeCC
Confidence 9988975 4887777655
No 237
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=28.06 E-value=3e+02 Score=23.98 Aligned_cols=72 Identities=11% Similarity=0.098 Sum_probs=42.2
Q ss_pred EEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhCCCce-------------------EEEecCCHH
Q psy11337 62 IVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFGRKCT-------------------YVVIGDGQD 122 (155)
Q Consensus 62 LVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG~k~~-------------------yvvIGDG~e 122 (155)
|.+-+.++-++++.| -.||--+. ...+..+...=++++.+..|..+. =++||. .-
T Consensus 353 i~g~~~~~~~la~~L-~ElGm~vv----~~gt~~~~~~d~~~l~~~~~~~~~i~~~~d~~el~~~i~~~~pDL~ig~-~~ 426 (492)
T 3u7q_A 353 LYIGGLRPRHVIGAY-EDLGMEVV----GTGYEFAHNDDYDRTMKEMGDSTLLYDDVTGYEFEEFVKRIKPDLIGSG-IK 426 (492)
T ss_dssp ECBSSSHHHHTHHHH-HTTTCEEE----EEEESSCCHHHHHHHHTTSCTTCEEEESCBHHHHHHHHHHHCCSEEEEC-HH
T ss_pred EECCCchHHHHHHHH-HHCCCEEE----EEeCCCCCHHHHHHHHHhCCCCcEEEcCCCHHHHHHHHHhcCCcEEEeC-cc
Confidence 345666888899977 46776443 233333323334555444332210 034554 45
Q ss_pred HHHHHHHcCCceeEecc
Q psy11337 123 EEAAAKQRNFPFWRISS 139 (155)
Q Consensus 123 Ee~aAk~~~~PFwrI~~ 139 (155)
|...|+++++||.++.+
T Consensus 427 ~~~ia~k~gIP~~~~~~ 443 (492)
T 3u7q_A 427 EKFIFQKMGIPFREMHS 443 (492)
T ss_dssp HHHHHHHTTCCEEESSS
T ss_pred hhHHHHHcCCCEEeccc
Confidence 67899999999999764
No 238
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A*
Probab=27.85 E-value=7.2 Score=31.46 Aligned_cols=56 Identities=18% Similarity=0.223 Sum_probs=39.0
Q ss_pred ChhhHHHHHHHHhCCCceEEEecCCHHHHH-----HHHHcCCceeEecc--cccHHHHHHHhh
Q psy11337 96 GKDSCFERIVTRFGRKCTYVVIGDGQDEEA-----AAKQRNFPFWRISS--RSDLAALYHALD 151 (155)
Q Consensus 96 GKescFerI~~RFG~k~~yvvIGDG~eEe~-----aAk~~~~PFwrI~~--~~Dl~~L~~al~ 151 (155)
|=+..|+++.+..-++..|.|||.-.+-+. -+++..|.+..|.. |+|..+|+..|-
T Consensus 200 ~v~e~f~~l~~~i~~~~p~avigs~~~~~~~g~~~~~r~y~wg~~~v~n~~h~df~~lr~~l~ 262 (301)
T 2qnr_A 200 DEDEDFKEQTRLLKASIPFSVVGSNQLIEAKGKKVRGRLYPWGVVEVENPEHNDFLKLRTMLI 262 (301)
T ss_dssp -----CHHHHHHHHTTCSEECCCCCCBCC-----CBEEEETTEEEETTCTTTCSHHHHHHHHH
T ss_pred cccHHHHHHHHHhhcCCCceEECCCceEecCCcEEeeEcCCCceEeeCCCccCcHHHHHHHHH
Confidence 566788888888878888999997643111 24566788888876 999999999885
No 239
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=27.81 E-value=1.1e+02 Score=24.09 Aligned_cols=90 Identities=9% Similarity=0.077 Sum_probs=49.9
Q ss_pred HHHHHhhhhcCCCceEEEEeCCCc--hH-HHHHHHHhhcc--cccccCccccccccChhhHHHHHHHHhCCCceEEEecC
Q psy11337 45 AIKCLTLINQRPSCTNVIVITTQL--IP-ALSKIMLFGLS--GIFDVENIYSSTKIGKDSCFERIVTRFGRKCTYVVIGD 119 (155)
Q Consensus 45 A~k~L~~i~~r~~~vNVLVTt~qL--Vp-aLaK~LLygL~--~~fpieNIYSa~k~GKescFerI~~RFG~k~~yvvIGD 119 (155)
+..+|+.+.++ +.-=++||+..- .. ...++--+|+. ..|. =+.+.....|..++..+. +.|.. .-++|||
T Consensus 106 ~~e~L~~L~~~-Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~--vi~~~~~~~K~~~~~~~~-~~~~~-~~l~VGD 180 (258)
T 2i33_A 106 SIDFLKYTESK-GVDIYYISNRKTNQLDATIKNLERVGAPQATKEH--ILLQDPKEKGKEKRRELV-SQTHD-IVLFFGD 180 (258)
T ss_dssp HHHHHHHHHHT-TCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTT--EEEECTTCCSSHHHHHHH-HHHEE-EEEEEES
T ss_pred HHHHHHHHHHC-CCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCce--EEECCCCCCCcHHHHHHH-HhCCC-ceEEeCC
Confidence 44555555544 345567777652 23 33333356766 3332 233433345666665544 33433 3557999
Q ss_pred CHHHHHHHH-------H---------cCCceeEecc
Q psy11337 120 GQDEEAAAK-------Q---------RNFPFWRISS 139 (155)
Q Consensus 120 G~eEe~aAk-------~---------~~~PFwrI~~ 139 (155)
...--+||+ . .+++|+.+..
T Consensus 181 s~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn 216 (258)
T 2i33_A 181 NLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPN 216 (258)
T ss_dssp SGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCC
T ss_pred CHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCC
Confidence 977666662 2 7999998754
No 240
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=27.71 E-value=69 Score=24.33 Aligned_cols=87 Identities=10% Similarity=0.078 Sum_probs=47.4
Q ss_pred HHHHHHHHHHhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHH
Q psy11337 24 REEWLQLRAEIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFER 103 (155)
Q Consensus 24 r~~w~~lr~e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFer 103 (155)
.+.|.+ .++.-..+=+..++.++.....+...-.|+.+|+... +++.....|-...|+++|.+=+.-.+.
T Consensus 119 ~~~~~~---~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~-------~~~~~~~~~~~~~Y~asKaa~~~~~~~ 188 (278)
T 3sx2_A 119 DDGWHD---VIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAG-------LAGVGSADPGSVGYVAAKHGVVGLMRV 188 (278)
T ss_dssp HHHHHH---HHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG-------TSCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH---HHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHh-------cCCCccCCCCchHhHHHHHHHHHHHHH
Confidence 344544 3444444445555566665544332223333333211 112222224445799999999888888
Q ss_pred HHHHhCC-CceEEEecCC
Q psy11337 104 IVTRFGR-KCTYVVIGDG 120 (155)
Q Consensus 104 I~~RFG~-k~~yvvIGDG 120 (155)
+...+++ +++..+|.-|
T Consensus 189 la~e~~~~gi~vn~v~PG 206 (278)
T 3sx2_A 189 YANLLAGQMIRVNSIHPS 206 (278)
T ss_dssp HHHHHGGGTEEEEEEEES
T ss_pred HHHHHhccCcEEEEEecC
Confidence 8888864 4777766433
No 241
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=27.66 E-value=64 Score=25.55 Aligned_cols=44 Identities=18% Similarity=0.260 Sum_probs=29.5
Q ss_pred ChhhHHHHHHHHh-C-CCceEE-EecCCH-HHHHHHHHcCCceeEecc
Q psy11337 96 GKDSCFERIVTRF-G-RKCTYV-VIGDGQ-DEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 96 GKescFerI~~RF-G-~k~~yv-vIGDG~-eEe~aAk~~~~PFwrI~~ 139 (155)
|.-+|++.|.++. + -++.-+ ||.+-. .-.+.|+++|+|+..++.
T Consensus 21 G~gsnl~all~~~~~~~~~eI~~Vis~~~a~~~~~A~~~gIp~~~~~~ 68 (215)
T 3da8_A 21 GTGSLLRSLLDAAVGDYPARVVAVGVDRECRAAEIAAEASVPVFTVRL 68 (215)
T ss_dssp SCCHHHHHHHHHSSTTCSEEEEEEEESSCCHHHHHHHHTTCCEEECCG
T ss_pred CChHHHHHHHHHHhccCCCeEEEEEeCCchHHHHHHHHcCCCEEEeCc
Confidence 4559999999988 3 223333 455442 234569999999999953
No 242
>3p9z_A Uroporphyrinogen III cosynthase (HEMD); MCSG, PSI2, structural genomics, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.10A {Helicobacter pylori}
Probab=27.64 E-value=1.4e+02 Score=22.63 Aligned_cols=48 Identities=17% Similarity=0.222 Sum_probs=35.5
Q ss_pred HHHHHHHhC--CCceEEEecCCHHHHHHHHHcCCceeEecccccHHHHHHHhh
Q psy11337 101 FERIVTRFG--RKCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDLAALYHALD 151 (155)
Q Consensus 101 FerI~~RFG--~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~~L~~al~ 151 (155)
.+...+.++ +++.+++|| +-..++++++|++. .+...|+..+|-.++.
T Consensus 173 v~~~~~~~~~~~~~~~~aIG--~~Ta~~l~~~G~~v-~va~~~~~e~ll~~l~ 222 (229)
T 3p9z_A 173 AKAFLHYFEFLENYTAISIG--NTTALYLQEQGIPS-YIAKKPSLEACLELAL 222 (229)
T ss_dssp HHHHHHHSCCCTTCEEEESS--HHHHHHHHHTTCCE-EECSSSSHHHHHHHHH
T ss_pred HHHHHHHhCcccCCEEEEEC--HHHHHHHHHcCCCc-eeCCCCCHHHHHHHHH
Confidence 344444443 467888885 56888999999995 5889999999887764
No 243
>4gl0_A LMO0810 protein; structural genomics, IDP05673, spermidine, putrescine, ABC transporter, niaid; HET: MSE PGE PG4; 1.92A {Listeria monocytogenes}
Probab=27.60 E-value=1.1e+02 Score=23.55 Aligned_cols=33 Identities=18% Similarity=0.211 Sum_probs=22.7
Q ss_pred ccccccccChhhHHHHHHHHhCCCceEEEecCC
Q psy11337 88 NIYSSTKIGKDSCFERIVTRFGRKCTYVVIGDG 120 (155)
Q Consensus 88 NIYSa~k~GKescFerI~~RFG~k~~yvvIGDG 120 (155)
|||+-..--.++.++...+++|=||.|+..+++
T Consensus 14 ~vy~W~~y~~~~~i~~Fek~tGIkV~~~~~~s~ 46 (333)
T 4gl0_A 14 TIYNWGDYIDPSLITKFEKETGIKVIYQTFDSN 46 (333)
T ss_dssp EEEEETTCSCHHHHHHHHHHHCCEEEEEEESCH
T ss_pred EEEeCCccCCHHHHHHHHHHHCCEEEEEeCCCH
Confidence 455433322346677777888999999888776
No 244
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=27.36 E-value=1.3e+02 Score=19.49 Aligned_cols=53 Identities=15% Similarity=0.108 Sum_probs=32.0
Q ss_pred hhHHHHHHHHh-CCCceEEEecCCHHHHHHH-HHcCCceeEecccc-cHHHHHHHh
Q psy11337 98 DSCFERIVTRF-GRKCTYVVIGDGQDEEAAA-KQRNFPFWRISSRS-DLAALYHAL 150 (155)
Q Consensus 98 escFerI~~RF-G~k~~yvvIGDG~eEe~aA-k~~~~PFwrI~~~~-Dl~~L~~al 150 (155)
.+..++|++.. .+.+..+++++..+++... +.+...+..+=..| +...|..++
T Consensus 66 ~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i 121 (140)
T 3grc_A 66 VSLIRALRRDSRTRDLAIVVVSANAREGELEFNSQPLAVSTWLEKPIDENLLILSL 121 (140)
T ss_dssp HHHHHHHHTSGGGTTCEEEEECTTHHHHHHHHCCTTTCCCEEECSSCCHHHHHHHH
T ss_pred HHHHHHHHhCcccCCCCEEEEecCCChHHHHHHhhhcCCCEEEeCCCCHHHHHHHH
Confidence 45667888753 6888999999888777765 55544443322222 444444443
No 245
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=27.21 E-value=55 Score=21.30 Aligned_cols=33 Identities=9% Similarity=0.069 Sum_probs=21.0
Q ss_pred hhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHc
Q psy11337 98 DSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQR 130 (155)
Q Consensus 98 escFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~ 130 (155)
....++|+++.+ +.+..+++++..+++...+.+
T Consensus 78 ~~~~~~l~~~~~~~~~~ii~~t~~~~~~~~~~~~ 111 (149)
T 1k66_A 78 REVLQEIKQDEVLKKIPVVIMTTSSNPKDIEICY 111 (149)
T ss_dssp HHHHHHHTTSTTGGGSCEEEEESCCCHHHHHHHH
T ss_pred HHHHHHHHhCcccCCCeEEEEeCCCCHHHHHHHH
Confidence 567788888764 667777777665555444433
No 246
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=27.20 E-value=1.9e+02 Score=21.46 Aligned_cols=107 Identities=13% Similarity=0.079 Sum_probs=53.1
Q ss_pred HHhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhCC-
Q psy11337 32 AEIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFGR- 110 (155)
Q Consensus 32 ~e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG~- 110 (155)
..++.-..+-....+.++.....+....=|.++|.... + ..-+|-...|+++|.+=+.-.+.+...+++
T Consensus 113 ~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~---------~-~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~ 182 (264)
T 3i4f_A 113 EMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGAD---------S-APGWIYRSAFAAAKVGLVSLTKTVAYEEAEY 182 (264)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGG---------G-CCCCTTCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhc---------c-cCCCCCCchhHHHHHHHHHHHHHHHHHhhhc
Confidence 33444444444555556555544333333334443111 0 112344568999999988888888888853
Q ss_pred CceEEEecCCH----------HHHHHHHHcCCceeEecccccHHHHHH
Q psy11337 111 KCTYVVIGDGQ----------DEEAAAKQRNFPFWRISSRSDLAALYH 148 (155)
Q Consensus 111 k~~yvvIGDG~----------eEe~aAk~~~~PFwrI~~~~Dl~~L~~ 148 (155)
+++..+|.-|. ++.........|..|+..-.|+.....
T Consensus 183 gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~ 230 (264)
T 3i4f_A 183 GITANMVCPGDIIGEMKEATIQEARQLKEHNTPIGRSGTGEDIARTIS 230 (264)
T ss_dssp TEEEEEEEECCCCGGGGSCCHHHHHHC--------CCCCHHHHHHHHH
T ss_pred CcEEEEEccCCccCccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHH
Confidence 47776664431 222222234567777766666655433
No 247
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=27.09 E-value=2e+02 Score=21.70 Aligned_cols=104 Identities=17% Similarity=0.160 Sum_probs=57.9
Q ss_pred HHhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhCC-
Q psy11337 32 AEIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFGR- 110 (155)
Q Consensus 32 ~e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG~- 110 (155)
..++.-..+-+...+.++.....+....=|.++|.. +...-+|-...|+++|.+=+.--+.+...+++
T Consensus 114 ~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~-----------~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~ 182 (262)
T 3pk0_A 114 GIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSIT-----------GPITGYPGWSHYGATKAAQLGFMRTAAIELAPH 182 (262)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSB-----------TTTBCCTTCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechh-----------hccCCCCCChhhHHHHHHHHHHHHHHHHHHHhh
Confidence 334444444445555666655443333334444432 11012455678999999999888888888854
Q ss_pred CceEEEecCCH----------HHHHHHHHcCCceeEecccccHHHH
Q psy11337 111 KCTYVVIGDGQ----------DEEAAAKQRNFPFWRISSRSDLAAL 146 (155)
Q Consensus 111 k~~yvvIGDG~----------eEe~aAk~~~~PFwrI~~~~Dl~~L 146 (155)
+++..+|.-|. ++.........|.-|+..-.|+...
T Consensus 183 gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~ 228 (262)
T 3pk0_A 183 KITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGALGTPEDIGHL 228 (262)
T ss_dssp TCEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTTSSCBCHHHHHHH
T ss_pred CcEEEEEEeCcCcCccccccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 46666664331 2222333445677666665666554
No 248
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=26.87 E-value=95 Score=24.22 Aligned_cols=44 Identities=16% Similarity=0.189 Sum_probs=29.0
Q ss_pred ChhhHHHHHHHHh--CC-CceEE-EecCC--HHHHHHHHHcCCceeEecc
Q psy11337 96 GKDSCFERIVTRF--GR-KCTYV-VIGDG--QDEEAAAKQRNFPFWRISS 139 (155)
Q Consensus 96 GKescFerI~~RF--G~-k~~yv-vIGDG--~eEe~aAk~~~~PFwrI~~ 139 (155)
|.-+|++.|.+++ |. +..-+ ||.+- ..-.+.|+++|+|+..++.
T Consensus 9 G~Gs~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~ 58 (209)
T 1meo_A 9 GTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINH 58 (209)
T ss_dssp SSCTTHHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCG
T ss_pred CCchHHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEECc
Confidence 4558999999887 32 23333 44443 2345679999999987654
No 249
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=26.68 E-value=1.7e+02 Score=21.39 Aligned_cols=35 Identities=17% Similarity=0.269 Sum_probs=25.5
Q ss_pred cccCccccccccChhhHHHHHHHHhCC-CceEEEec
Q psy11337 84 FDVENIYSSTKIGKDSCFERIVTRFGR-KCTYVVIG 118 (155)
Q Consensus 84 fpieNIYSa~k~GKescFerI~~RFG~-k~~yvvIG 118 (155)
+|-...|+++|.+=+.-.+.+...+++ .+++.+|-
T Consensus 152 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~ 187 (244)
T 2bd0_A 152 FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQ 187 (244)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEE
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEE
Confidence 355678999999988877777777753 46666654
No 250
>1wde_A Probable diphthine synthase; structural genomics, conserved hypothetical protein, riken S genomics/proteomics initiative, RSGI, transferase; 2.00A {Aeropyrum pernix} SCOP: c.90.1.1
Probab=26.26 E-value=58 Score=26.17 Aligned_cols=49 Identities=22% Similarity=0.185 Sum_probs=34.0
Q ss_pred hhHHHHHHHHh-CCCceEEEecC------CHHHHHHHHHcCCceeEecccccHHHH
Q psy11337 98 DSCFERIVTRF-GRKCTYVVIGD------GQDEEAAAKQRNFPFWRISSRSDLAAL 146 (155)
Q Consensus 98 escFerI~~RF-G~k~~yvvIGD------G~eEe~aAk~~~~PFwrI~~~~Dl~~L 146 (155)
+++.++|.+.- |+++.+++.|| |.++-+++++.++|+--|--=|.+.+.
T Consensus 71 e~~~~~i~~~~~g~~Vv~L~~GDP~v~g~~~~l~~~l~~~gi~veviPGiSs~~aa 126 (294)
T 1wde_A 71 EERSREIVSRALDAVVAVVTAGDPMVATTHSSLAAEALEAGVAVRYIPGVSGVQAA 126 (294)
T ss_dssp HTSHHHHTCCSSCCEEEEEESBCTTSSSSHHHHHHHHHHTTCEEEEECCCCHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCCccccCHHHHHHHHHHCCCCEEEECCHhHHHHH
Confidence 56677787643 99999999998 457777777778776655444444433
No 251
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=26.22 E-value=1e+02 Score=20.48 Aligned_cols=32 Identities=13% Similarity=0.164 Sum_probs=21.5
Q ss_pred hhHHHHHHHHhCCCceEEEecCCHHHHHHHHHc
Q psy11337 98 DSCFERIVTRFGRKCTYVVIGDGQDEEAAAKQR 130 (155)
Q Consensus 98 escFerI~~RFG~k~~yvvIGDG~eEe~aAk~~ 130 (155)
....++|++++ +.+..+++++..+.+.+.+.+
T Consensus 64 ~~~~~~l~~~~-~~~~ii~~s~~~~~~~~~~~~ 95 (151)
T 3kcn_A 64 TEVIQKARLIS-PNSVYLMLTGNQDLTTAMEAV 95 (151)
T ss_dssp HHHHHHHHHHC-SSCEEEEEECGGGHHHHHHHH
T ss_pred HHHHHHHHhcC-CCcEEEEEECCCCHHHHHHHH
Confidence 45667777665 778888888777765544443
No 252
>3j21_A 50S ribosomal protein L1P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=26.11 E-value=64 Score=25.57 Aligned_cols=35 Identities=26% Similarity=0.444 Sum_probs=26.6
Q ss_pred CCCceEEEecCCHHHHHHHHHcCCceeEecccccHHHHH
Q psy11337 109 GRKCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDLAALY 147 (155)
Q Consensus 109 G~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~~L~ 147 (155)
|++.+=||+++| |.++.|++.|.+ +-.-.||..++
T Consensus 57 ~k~~kV~Vf~~~-~~~~~Ak~aGad---~vg~e~L~k~~ 91 (216)
T 3j21_A 57 GKDVKIAVIADG-AVAEAARKLGLD---VISSAELEEIA 91 (216)
T ss_dssp SSCCCEEECCCS-HHHHHHHHHTCC---CCCTTHHHHHH
T ss_pred CCCcEEEEECCH-HHHHHHHhcCCC---ccCHHHHHHHh
Confidence 678899999998 566778999998 33445676665
No 253
>2deb_A CPT II, carnitine O-palmitoyltransferase II, mitochondrial; central six-stranded beta-sheet; HET: BOG COA PLM; 1.60A {Rattus norvegicus} PDB: 2fw3_A* 2fyo_A 2rcu_A* 2h4t_A*
Probab=26.05 E-value=69 Score=29.46 Aligned_cols=76 Identities=22% Similarity=0.290 Sum_probs=48.1
Q ss_pred ccCChhhHHHHHHHHHHhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccC
Q psy11337 17 GLLGPAKREEWLQLRAEIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIG 96 (155)
Q Consensus 17 ~Ll~~~~r~~w~~lr~e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~G 96 (155)
|.|....|+.|.++|+++- | ..-.+.|+.|.+--=+|..==++..-.-.+++.||.|=|.
T Consensus 284 g~LTt~~Rd~WA~~R~~L~---~---~~N~~sL~~IesAlFvvcLDd~~~~~~~~~~~~~LhG~g~-------------- 343 (653)
T 2deb_A 284 AYLTSENRDVWAELRQKLI---F---DGNEETLKKVDSAVFCLCLDDFPMKDLIHLSHTMLHGDGT-------------- 343 (653)
T ss_dssp GGGGGSCHHHHHHHHHHHH---H---TTCHHHHHHHHHSSCEEEECSSCCCSHHHHHHHHHTTTSS--------------
T ss_pred cccccCCchHHHHHHHHHh---C---hhhHHHHHHHHhceEEEEecCCCCCCHHHHHHHhccCCCc--------------
Confidence 6788889999999999874 1 1235667777644222111001122334689999998552
Q ss_pred hhhHHHHHHHHhCCC-ceEEEecCCH
Q psy11337 97 KDSCFERIVTRFGRK-CTYVVIGDGQ 121 (155)
Q Consensus 97 KescFerI~~RFG~k-~~yvvIGDG~ 121 (155)
.|+-.| .+|||-.||.
T Consensus 344 ---------NRWfDKs~qlIV~~nG~ 360 (653)
T 2deb_A 344 ---------NRWFDKSFNLIVAEDGT 360 (653)
T ss_dssp ---------SCCTTBSEEEEECTTCC
T ss_pred ---------cccccccceEEEecCCc
Confidence 777555 5999988874
No 254
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=26.02 E-value=1.9e+02 Score=23.21 Aligned_cols=28 Identities=14% Similarity=0.270 Sum_probs=19.9
Q ss_pred HHHHHHcCCceeEeccccc----HHHHHHHhh
Q psy11337 124 EAAAKQRNFPFWRISSRSD----LAALYHALD 151 (155)
Q Consensus 124 e~aAk~~~~PFwrI~~~~D----l~~L~~al~ 151 (155)
+..|+.+++|+..++...+ ...|..++.
T Consensus 56 ~~~A~~LGIpl~~v~~~g~~~~e~e~l~~~l~ 87 (237)
T 3rjz_A 56 DLQARALGIPLVKGFTQGEKEKEVEDLKRVLS 87 (237)
T ss_dssp HHHHHHHTCCEEEEEC------CHHHHHHHHT
T ss_pred HHHHHHcCCCEEEEECCCCchHHHHHHHHHHH
Confidence 4578999999999988643 667777664
No 255
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=26.01 E-value=78 Score=24.45 Aligned_cols=36 Identities=11% Similarity=0.135 Sum_probs=29.8
Q ss_pred ccCccccccccChhhHHHHHHHHhCCCceEEEecCC
Q psy11337 85 DVENIYSSTKIGKDSCFERIVTRFGRKCTYVVIGDG 120 (155)
Q Consensus 85 pieNIYSa~k~GKescFerI~~RFG~k~~yvvIGDG 120 (155)
|-...|+++|.+=+.-.+.+...++++++..+|.-|
T Consensus 150 ~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG 185 (281)
T 3zv4_A 150 GGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPG 185 (281)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEC
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECC
Confidence 334569999999999999999999888888887654
No 256
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=25.71 E-value=91 Score=23.72 Aligned_cols=80 Identities=10% Similarity=0.040 Sum_probs=47.2
Q ss_pred HHHHHHhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCC-chHHHHHHHHhhcccccccCccccccccChhhHHHHHHH
Q psy11337 28 LQLRAEIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQ-LIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVT 106 (155)
Q Consensus 28 ~~lr~e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~q-LVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~ 106 (155)
.++...++.-..+-+..++.++.....+....=|.++|.. ..| .|-...|+++|.+=+...+.+..
T Consensus 130 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-------------~~~~~~Y~~sK~a~~~l~~~la~ 196 (272)
T 1yb1_A 130 PQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS-------------VPFLLAYCSSKFAAVGFHKTLTD 196 (272)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC-------------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC-------------CCCchhHHHHHHHHHHHHHHHHH
Confidence 3444445555555555556666665444333333344432 111 23346799999998888888888
Q ss_pred Hh----CCCceEEEecCC
Q psy11337 107 RF----GRKCTYVVIGDG 120 (155)
Q Consensus 107 RF----G~k~~yvvIGDG 120 (155)
.+ .++++..+|--|
T Consensus 197 e~~~~~~~gi~v~~v~Pg 214 (272)
T 1yb1_A 197 ELAALQITGVKTTCLCPN 214 (272)
T ss_dssp HHHHTTCTTEEEEEEEET
T ss_pred HHHHhCCCCeEEEEEeCC
Confidence 77 356777777655
No 257
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=25.71 E-value=1.1e+02 Score=23.36 Aligned_cols=77 Identities=17% Similarity=0.187 Sum_probs=47.8
Q ss_pred HhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCC-chHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhCC-
Q psy11337 33 EIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQ-LIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFGR- 110 (155)
Q Consensus 33 e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~q-LVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG~- 110 (155)
.++.-..+=+...+.++.....+....-|.++|.. ..|. .+|-...|+++|.+=+.--+.+...+++
T Consensus 117 ~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~~~Y~asKaal~~l~~~la~e~~~~ 185 (274)
T 3e03_A 117 MQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPA-----------WWGAHTGYTLAKMGMSLVTLGLAAEFGPQ 185 (274)
T ss_dssp HHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHH-----------HHHHCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCC-----------CCCCCchHHHHHHHHHHHHHHHHHHhhhc
Confidence 34444444445556666666544444444444432 2221 1344567999999999999999999865
Q ss_pred CceEEEecCC
Q psy11337 111 KCTYVVIGDG 120 (155)
Q Consensus 111 k~~yvvIGDG 120 (155)
.++..+|.-|
T Consensus 186 gI~vn~v~PG 195 (274)
T 3e03_A 186 GVAINALWPR 195 (274)
T ss_dssp TCEEEEEECS
T ss_pred CEEEEEEECC
Confidence 4888888777
No 258
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=25.62 E-value=1.3e+02 Score=19.64 Aligned_cols=28 Identities=14% Similarity=0.074 Sum_probs=18.1
Q ss_pred hhHHHHHHHHhCCCceEEEecCCHHHHH
Q psy11337 98 DSCFERIVTRFGRKCTYVVIGDGQDEEA 125 (155)
Q Consensus 98 escFerI~~RFG~k~~yvvIGDG~eEe~ 125 (155)
.+..++|+++.++.+..++++...+++.
T Consensus 68 ~~~~~~lr~~~~~~~~ii~lt~~~~~~~ 95 (133)
T 2r25_B 68 LLSTKMIRRDLGYTSPIVALTAFADDSN 95 (133)
T ss_dssp HHHHHHHHHHSCCCSCEEEEESCCSHHH
T ss_pred HHHHHHHHhhcCCCCCEEEEECCCCHHH
Confidence 4667888877666666676665544443
No 259
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=25.58 E-value=1.9e+02 Score=21.27 Aligned_cols=63 Identities=22% Similarity=0.245 Sum_probs=41.5
Q ss_pred ccCccccccccChhhHHHHHHHHhC-CCceEEEecCCH----------HHHHHHHHcCCceeEecccccHHHHH
Q psy11337 85 DVENIYSSTKIGKDSCFERIVTRFG-RKCTYVVIGDGQ----------DEEAAAKQRNFPFWRISSRSDLAALY 147 (155)
Q Consensus 85 pieNIYSa~k~GKescFerI~~RFG-~k~~yvvIGDG~----------eEe~aAk~~~~PFwrI~~~~Dl~~L~ 147 (155)
|-...|+++|.+=+.-.+.+...++ ++++..+|.-|. ++....-....|.-++..-.|+....
T Consensus 149 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i 222 (247)
T 3lyl_A 149 PGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIATKIPSGQIGEPKDIAAAV 222 (247)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHHHHTTSTTCCCBCHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHHHhhcCCCCCCcCHHHHHHHH
Confidence 4567899999999999999998885 457777764431 23333344556766666555655443
No 260
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=25.57 E-value=1.4e+02 Score=23.78 Aligned_cols=81 Identities=10% Similarity=0.028 Sum_probs=46.9
Q ss_pred HHHHHhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHh
Q psy11337 29 QLRAEIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRF 108 (155)
Q Consensus 29 ~lr~e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RF 108 (155)
+.+..++.-..+=+...+.++.....+....=|.++|.. +.....|--..|+++|.+=+.-.+.+...+
T Consensus 110 ~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~-----------~~~~~~~~~~~Y~asKaa~~~~~~~la~el 178 (324)
T 3u9l_A 110 QFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSS-----------SAGGTPPYLAPYFAAKAAMDAIAVQYAREL 178 (324)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG-----------GTSCCCSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecch-----------hccCCCCcchhHHHHHHHHHHHHHHHHHHh
Confidence 334445555555555666666665443333333344321 222334555679999999998888888887
Q ss_pred C-CCceEEEecCC
Q psy11337 109 G-RKCTYVVIGDG 120 (155)
Q Consensus 109 G-~k~~yvvIGDG 120 (155)
+ .+++..+|--|
T Consensus 179 ~~~gI~v~~v~PG 191 (324)
T 3u9l_A 179 SRWGIETSIIVPG 191 (324)
T ss_dssp HTTTEEEEEEEEC
T ss_pred hhhCcEEEEEECC
Confidence 4 34666665433
No 261
>2y8e_A RAB-protein 6, GH09086P, RAB6; hydrolase, nucleotide binding, GTP binding; HET: GNP; 1.39A {Drosophila melanogaster} PDB: 3cwz_A* 1yzq_A* 2gil_A* 2e9s_A* 2fe4_A* 2ffq_A* 1d5c_A*
Probab=25.50 E-value=1.5e+02 Score=19.77 Aligned_cols=52 Identities=21% Similarity=0.387 Sum_probs=35.1
Q ss_pred HHHHHHHHhCCCceEEEecCCHHH-----------HHHHHHcCCceeEecccc--cHHHHHHHhh
Q psy11337 100 CFERIVTRFGRKCTYVVIGDGQDE-----------EAAAKQRNFPFWRISSRS--DLAALYHALD 151 (155)
Q Consensus 100 cFerI~~RFG~k~~yvvIGDG~eE-----------e~aAk~~~~PFwrI~~~~--Dl~~L~~al~ 151 (155)
.++.+.+..++++..++|+.-.|- ++.++..++||..+|+.. ++..+...+.
T Consensus 108 ~~~~i~~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~i~~l~~~l~ 172 (179)
T 2y8e_A 108 WIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVA 172 (179)
T ss_dssp HHHHHHHHHTTSSEEEEEEECGGGGGGCCSCHHHHHHHHHHHTCEEEEEBTTTTBSHHHHHHHHH
T ss_pred HHHHHHHhcCCCCcEEEEEECCcccccCcCCHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHH
Confidence 455566656778888888754331 335678899999999854 4677666553
No 262
>3vus_A Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; deacetyl hydrolase; 1.65A {Escherichia coli}
Probab=25.45 E-value=28 Score=27.76 Aligned_cols=17 Identities=18% Similarity=0.417 Sum_probs=15.0
Q ss_pred HHHHHhCCCceEEEecC
Q psy11337 103 RIVTRFGRKCTYVVIGD 119 (155)
Q Consensus 103 rI~~RFG~k~~yvvIGD 119 (155)
-|.+++|-++||.|||+
T Consensus 85 ~~l~~~~~~atfFv~~~ 101 (268)
T 3vus_A 85 PILQAFQWPAVWAPVGS 101 (268)
T ss_dssp HHHHHHTCCEEEEECHH
T ss_pred HHHHHcCCCEEEEEecc
Confidence 47899999999999995
No 263
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=25.40 E-value=46 Score=22.58 Aligned_cols=41 Identities=10% Similarity=0.071 Sum_probs=24.3
Q ss_pred HHHHHHHh-CCCceEEEecC-------CHHHHH-HHHHcCCceeEecccc
Q psy11337 101 FERIVTRF-GRKCTYVVIGD-------GQDEEA-AAKQRNFPFWRISSRS 141 (155)
Q Consensus 101 FerI~~RF-G~k~~yvvIGD-------G~eEe~-aAk~~~~PFwrI~~~~ 141 (155)
|+++.++| ++++.++.|.- ..++-. ..+.++++|+++...+
T Consensus 60 l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 109 (164)
T 2h30_A 60 AEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKLPVVTDN 109 (164)
T ss_dssp HHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTSCEEECT
T ss_pred HHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcceEEEcC
Confidence 56777777 56788888852 111111 2445678877776543
No 264
>2wwq_5 50S ribosomal protein L1; ribosomal protein, ribonucleoprotein, nucleotide-binding, protein biosynthesis, translation, zinc-finger; HET: 5MU; 5.80A {Escherichia coli} PDB: 3fik_5 3izt_C* 3izu_C* 3j01_5 3j0t_C* 3j0w_C* 3j0y_C* 3j11_C* 3j12_C* 3j14_C* 3kcr_5 2rdo_9 2gya_2 2gyc_2
Probab=25.35 E-value=39 Score=27.33 Aligned_cols=26 Identities=27% Similarity=0.334 Sum_probs=21.7
Q ss_pred CCCceEEEecCCHHHHHHHHHcCCcee
Q psy11337 109 GRKCTYVVIGDGQDEEAAAKQRNFPFW 135 (155)
Q Consensus 109 G~k~~yvvIGDG~eEe~aAk~~~~PFw 135 (155)
|++.+-||+++|. .++.|++.|.+|+
T Consensus 70 ~k~~rV~Vfa~~~-~~~~Ak~aGad~v 95 (234)
T 2wwq_5 70 GRSVRVAVFTQGA-NAEAAKAAGAELV 95 (234)
T ss_dssp SSCCCEEEECSSS-CHHHHHHHTCSEE
T ss_pred CCCcEEEEEcCch-hHHHHHHcCCCEE
Confidence 5789999999996 4777899998865
No 265
>4dkx_A RAS-related protein RAB-6A; GTP binding fold, membrane trafficking, GTP, cytosol, protei transport; HET: GDP; 1.90A {Homo sapiens} PDB: 3bbp_A*
Probab=25.26 E-value=73 Score=24.21 Aligned_cols=42 Identities=24% Similarity=0.400 Sum_probs=31.1
Q ss_pred HHHHHHHHhCCCceEEEecCCHH---H--------HHHHHHcCCceeEecccc
Q psy11337 100 CFERIVTRFGRKCTYVVIGDGQD---E--------EAAAKQRNFPFWRISSRS 141 (155)
Q Consensus 100 cFerI~~RFG~k~~yvvIGDG~e---E--------e~aAk~~~~PFwrI~~~~ 141 (155)
-++.|++..++++..++||--.| + ++-|+++|+||..+|+-.
T Consensus 107 ~~~~i~~~~~~~~piilVgNK~Dl~~~r~V~~~e~~~~a~~~~~~~~e~SAkt 159 (216)
T 4dkx_A 107 WIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKA 159 (216)
T ss_dssp HHHHHHHHHTTSSEEEEEEECTTCGGGCCSCHHHHHHHHHHHTCEEEEEBTTT
T ss_pred HHHHHHHhcCCCCeEEEEeeccchHhcCcccHHHHhhHHHHhCCeeEEEeCCC
Confidence 45556667799999999984332 1 346899999999999843
No 266
>2i5u_A DNAD domain protein; structural genomics, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG, U function; HET: MSE; 1.50A {Enterococcus faecalis} SCOP: a.275.1.1
Probab=25.06 E-value=1.4e+02 Score=19.80 Aligned_cols=41 Identities=10% Similarity=0.089 Sum_probs=27.3
Q ss_pred cchhhhhhc-ccccCChhhHHHHHHHHHHhH------HhhhHHHHHHHH
Q psy11337 6 PNETTARLD-ACGLLGPAKREEWLQLRAEIE------SVTDNWLSLAIK 47 (155)
Q Consensus 6 ~~y~~Y~~n-v~~Ll~~~~r~~w~~lr~e~e------~~Td~WLs~A~k 47 (155)
++|+-|+++ ++ .|+|-+.+.......+.. .+...+...|++
T Consensus 3 ~~~~~~e~~g~g-~ls~~e~e~i~~w~~~~~~~~~~~~~~~elI~~A~~ 50 (83)
T 2i5u_A 3 AIRSIWENNGFG-LMSSKTMTDFDYWISDFEKIGASQKEAEQLIVKAIE 50 (83)
T ss_dssp HHHHHHHTTTSC-SCCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHhCCC-CCCHHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHH
Confidence 578889998 97 999987765555444331 446667666644
No 267
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=25.03 E-value=95 Score=23.08 Aligned_cols=36 Identities=11% Similarity=0.113 Sum_probs=26.3
Q ss_pred ccCccccccccChhhHHHHHHHHhCC-CceEEEecCC
Q psy11337 85 DVENIYSSTKIGKDSCFERIVTRFGR-KCTYVVIGDG 120 (155)
Q Consensus 85 pieNIYSa~k~GKescFerI~~RFG~-k~~yvvIGDG 120 (155)
|-...|+++|.+=+.-.+.+...+++ +++..+|.-|
T Consensus 141 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG 177 (245)
T 3e9n_A 141 PGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPG 177 (245)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEEC
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecC
Confidence 44568999999999999988888854 4666666443
No 268
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=24.98 E-value=1.1e+02 Score=19.66 Aligned_cols=33 Identities=9% Similarity=0.060 Sum_probs=21.4
Q ss_pred hhHHHHHHHHh-CCCceEEEecCCHHHHHHHHHc
Q psy11337 98 DSCFERIVTRF-GRKCTYVVIGDGQDEEAAAKQR 130 (155)
Q Consensus 98 escFerI~~RF-G~k~~yvvIGDG~eEe~aAk~~ 130 (155)
.+..++|++.. .+.+..+++++..+.+...+.+
T Consensus 70 ~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~ 103 (143)
T 3cnb_A 70 FSICHRIKSTPATANIIVIAMTGALTDDNVSRIV 103 (143)
T ss_dssp HHHHHHHHTSTTTTTSEEEEEESSCCHHHHHHHH
T ss_pred HHHHHHHHhCccccCCcEEEEeCCCCHHHHHHHH
Confidence 46677888753 5778888887766665444333
No 269
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=24.98 E-value=57 Score=24.96 Aligned_cols=42 Identities=10% Similarity=-0.006 Sum_probs=25.0
Q ss_pred CceEEEecCCHHHHH---HHHHcC--CceeEecccccHHHHHHHhhc
Q psy11337 111 KCTYVVIGDGQDEEA---AAKQRN--FPFWRISSRSDLAALYHALDN 152 (155)
Q Consensus 111 k~~yvvIGDG~eEe~---aAk~~~--~PFwrI~~~~Dl~~L~~al~~ 152 (155)
++.++++|+|.+++. .+++++ +-|.---++.++..++.+.+.
T Consensus 188 ~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv 234 (342)
T 2iuy_A 188 GRRLVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHA 234 (342)
T ss_dssp TCCEEEESCCCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSE
T ss_pred CcEEEEEeCcccHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCE
Confidence 799999999965443 344544 223222334456777776553
No 270
>1z08_A RAS-related protein RAB-21; RAB GTPase, vesicular trafficking, protein transport; HET: GNP; 1.80A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ot3_B 1yzu_A* 1z0i_A 1yzt_A*
Probab=24.97 E-value=1.6e+02 Score=19.64 Aligned_cols=49 Identities=16% Similarity=0.354 Sum_probs=32.4
Q ss_pred HHHHHHhCCCceEEEecCCHH-----------HHHHHHHcCCceeEecccc--cHHHHHHHh
Q psy11337 102 ERIVTRFGRKCTYVVIGDGQD-----------EEAAAKQRNFPFWRISSRS--DLAALYHAL 150 (155)
Q Consensus 102 erI~~RFG~k~~yvvIGDG~e-----------Ee~aAk~~~~PFwrI~~~~--Dl~~L~~al 150 (155)
+.+.+..++++..++||.-.| -++-|+..++||+.+|+.. .+..+...+
T Consensus 102 ~~~~~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~gi~~l~~~l 163 (170)
T 1z08_A 102 KELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDL 163 (170)
T ss_dssp HHHHHHHGGGSEEEEEEECGGGGGGCCSCHHHHHHHHHHTTCEEEEEBTTTTBSHHHHHHHH
T ss_pred HHHHHhcCCCCeEEEEEECcccccccccCHHHHHHHHHHcCCeEEEecCCCCCCHHHHHHHH
Confidence 344555567778888875433 2335778899999999854 466666554
No 271
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=24.77 E-value=1.4e+02 Score=22.31 Aligned_cols=64 Identities=19% Similarity=0.186 Sum_probs=42.9
Q ss_pred ccCccccccccChhhHHHHHHHHhCC-CceEEEecCCH----------HHHHHHHHcCCceeEecccccHHHHHH
Q psy11337 85 DVENIYSSTKIGKDSCFERIVTRFGR-KCTYVVIGDGQ----------DEEAAAKQRNFPFWRISSRSDLAALYH 148 (155)
Q Consensus 85 pieNIYSa~k~GKescFerI~~RFG~-k~~yvvIGDG~----------eEe~aAk~~~~PFwrI~~~~Dl~~L~~ 148 (155)
|-...|+++|.+=+.-.+.+...+++ +++..+|.-|. ++....-....|..|+..-.|+.....
T Consensus 149 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~ 223 (246)
T 3osu_A 149 PGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVA 223 (246)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCTTCSCBCHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 44568999999999888888888854 47777665441 232333344678887777667665443
No 272
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=24.73 E-value=60 Score=24.49 Aligned_cols=42 Identities=12% Similarity=0.148 Sum_probs=35.5
Q ss_pred ccChhhHHHHHHHHhCC--CceEEEecCCHHHHHHHHHcCCcee
Q psy11337 94 KIGKDSCFERIVTRFGR--KCTYVVIGDGQDEEAAAKQRNFPFW 135 (155)
Q Consensus 94 k~GKescFerI~~RFG~--k~~yvvIGDG~eEe~aAk~~~~PFw 135 (155)
.+.|.+-.+++.+++|- .-.-++|||+.--.+..+..++++.
T Consensus 177 g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va 220 (249)
T 2zos_A 177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFI 220 (249)
T ss_dssp SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEE
T ss_pred CCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEE
Confidence 67899999999999853 4567899999988888888888754
No 273
>3a1s_A Iron(II) transport protein B; FEOB, iron transporter, small GTPase, G protein, GDI; HET: GDP; 1.50A {Thermotoga maritima} PDB: 3a1t_A* 3a1u_A* 3a1v_A* 3a1w_A
Probab=24.70 E-value=1.9e+02 Score=22.27 Aligned_cols=60 Identities=15% Similarity=0.092 Sum_probs=35.1
Q ss_pred ccccccccChhhHHHHHHHHhCCCceEEEecCCHHH----------HHHHHHcCCceeEecccc--cHHHHHHH
Q psy11337 88 NIYSSTKIGKDSCFERIVTRFGRKCTYVVIGDGQDE----------EAAAKQRNFPFWRISSRS--DLAALYHA 149 (155)
Q Consensus 88 NIYSa~k~GKescFerI~~RFG~k~~yvvIGDG~eE----------e~aAk~~~~PFwrI~~~~--Dl~~L~~a 149 (155)
+||+++.. ++...++.+-...++..++|+.-.|. ++-++.+++||+.+|+.. .+..|..+
T Consensus 89 ~V~D~t~~--~~~~~~~~~l~~~~~pvilv~NK~Dl~~~~~i~~~~~~l~~~lg~~vi~~SA~~g~gi~el~~~ 160 (258)
T 3a1s_A 89 LVADSVNP--EQSLYLLLEILEMEKKVILAMTAIDEAKKTGMKIDRYELQKHLGIPVVFTSSVTGEGLEELKEK 160 (258)
T ss_dssp EEEETTSC--HHHHHHHHHHHTTTCCEEEEEECHHHHHHTTCCBCHHHHHHHHCSCEEECCTTTCTTHHHHHHH
T ss_pred EEeCCCch--hhHHHHHHHHHhcCCCEEEEEECcCCCCccchHHHHHHHHHHcCCCEEEEEeeCCcCHHHHHHH
Confidence 45555542 33333443333445666777766664 345788899999999743 35555443
No 274
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=24.58 E-value=1.2e+02 Score=20.47 Aligned_cols=29 Identities=14% Similarity=0.230 Sum_probs=16.8
Q ss_pred hhHHHHHHHHhCCCceEEEecCCHHHHHHH
Q psy11337 98 DSCFERIVTRFGRKCTYVVIGDGQDEEAAA 127 (155)
Q Consensus 98 escFerI~~RFG~k~~yvvIGDG~eEe~aA 127 (155)
....++|++++ +.+..+++++..+++...
T Consensus 99 ~~~~~~lr~~~-~~~~ii~ls~~~~~~~~~ 127 (157)
T 3hzh_A 99 ITCLSNIMEFD-KNARVIMISALGKEQLVK 127 (157)
T ss_dssp HHHHHHHHHHC-TTCCEEEEESCCCHHHHH
T ss_pred HHHHHHHHhhC-CCCcEEEEeccCcHHHHH
Confidence 45666776655 556666666654444433
No 275
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=24.52 E-value=1.9e+02 Score=21.57 Aligned_cols=79 Identities=14% Similarity=0.176 Sum_probs=47.5
Q ss_pred HHHHhHHhhhHHHHHHHHHHhhhhcCC-CceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHh
Q psy11337 30 LRAEIESVTDNWLSLAIKCLTLINQRP-SCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRF 108 (155)
Q Consensus 30 lr~e~e~~Td~WLs~A~k~L~~i~~r~-~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RF 108 (155)
+...++.-..+=....+.++.....+. ..-.|+.+|+... . .-.|-...|+++|.+=+.--+.+...+
T Consensus 119 ~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~----------~-~~~~~~~~Y~asKaa~~~~~~~la~e~ 187 (259)
T 1oaa_A 119 VNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCA----------L-QPYKGWGLYCAGKAARDMLYQVLAAEE 187 (259)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGG----------T-SCCTTCHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchh----------c-CCCCCccHHHHHHHHHHHHHHHHHhhC
Confidence 334444444455555566666654441 2233443333221 0 113445689999999998888888888
Q ss_pred CCCceEEEecCC
Q psy11337 109 GRKCTYVVIGDG 120 (155)
Q Consensus 109 G~k~~yvvIGDG 120 (155)
++ ++..+|.-|
T Consensus 188 ~~-i~vn~v~PG 198 (259)
T 1oaa_A 188 PS-VRVLSYAPG 198 (259)
T ss_dssp TT-EEEEEEECC
T ss_pred CC-ceEEEecCC
Confidence 75 888888766
No 276
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=24.39 E-value=36 Score=26.57 Aligned_cols=41 Identities=32% Similarity=0.488 Sum_probs=31.2
Q ss_pred HHHHHHHhCCCceEEEecCCHHHHHHHHHcCCceeEecccccHHHHHHHhh
Q psy11337 101 FERIVTRFGRKCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDLAALYHALD 151 (155)
Q Consensus 101 FerI~~RFG~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~~L~~al~ 151 (155)
-||+...|.-+++|-+.|+| +-.|.+.| -..||.+|..||.
T Consensus 62 aerl~~efni~v~y~imgsg------sgvm~i~f----~gddlea~ekalk 102 (170)
T 4hhu_A 62 AERLKAEFNINVQYQIMGSG------SGVMVIVF----EGDDLEALEKALK 102 (170)
T ss_dssp HHHHHHHHTCEEEEEEECTT------CCEEEEEE----ECSCHHHHHHHHH
T ss_pred HHHHHHhcceEEEEEEEeCC------ceEEEEEE----ecCcHHHHHHHHH
Confidence 38999999999999999998 33443333 2567888888874
No 277
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=24.36 E-value=1.5e+02 Score=19.23 Aligned_cols=33 Identities=9% Similarity=0.050 Sum_probs=21.3
Q ss_pred hhHHHHHHHHhCCCceEEEecCCHHHHHHHHHcC
Q psy11337 98 DSCFERIVTRFGRKCTYVVIGDGQDEEAAAKQRN 131 (155)
Q Consensus 98 escFerI~~RFG~k~~yvvIGDG~eEe~aAk~~~ 131 (155)
....++|+++ ++.+..+++++..+.+.+.+.+.
T Consensus 65 ~~~~~~l~~~-~~~~~ii~ls~~~~~~~~~~~~~ 97 (143)
T 3jte_A 65 MDILREIKKI-TPHMAVIILTGHGDLDNAILAMK 97 (143)
T ss_dssp HHHHHHHHHH-CTTCEEEEEECTTCHHHHHHHHH
T ss_pred HHHHHHHHHh-CCCCeEEEEECCCCHHHHHHHHH
Confidence 4566777776 47777888887766655444333
No 278
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=24.36 E-value=1.2e+02 Score=20.21 Aligned_cols=34 Identities=12% Similarity=0.328 Sum_probs=21.2
Q ss_pred HHHHHHHhC-CCceEEEec---CCHHH-HHHHHHcCCce
Q psy11337 101 FERIVTRFG-RKCTYVVIG---DGQDE-EAAAKQRNFPF 134 (155)
Q Consensus 101 FerI~~RFG-~k~~yvvIG---DG~eE-e~aAk~~~~PF 134 (155)
++++.++|+ +++.++.|. |..++ .+.+++++++|
T Consensus 50 l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~ 88 (153)
T 2l5o_A 50 IIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPF 88 (153)
T ss_dssp HHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCS
T ss_pred HHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCc
Confidence 567778884 458888876 33222 23566777775
No 279
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=24.31 E-value=1.4e+02 Score=22.38 Aligned_cols=62 Identities=16% Similarity=0.180 Sum_probs=41.2
Q ss_pred ccCccccccccChhhHHHHHHHHhCCCceEEEecCCHH------HHHHHHHcCCceeEecccccHHHH
Q psy11337 85 DVENIYSSTKIGKDSCFERIVTRFGRKCTYVVIGDGQD------EEAAAKQRNFPFWRISSRSDLAAL 146 (155)
Q Consensus 85 pieNIYSa~k~GKescFerI~~RFG~k~~yvvIGDG~e------Ee~aAk~~~~PFwrI~~~~Dl~~L 146 (155)
|-...|+++|.+=+.--+.+...+|++++..+|.-|.= +.........|.-|+..-.|+...
T Consensus 141 ~~~~~Y~asKaa~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~p~~r~~~p~dva~~ 208 (247)
T 3dii_A 141 PDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEFTQEDCAAIPAGKVGTPKDISNM 208 (247)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---CCHHHHHTSTTSSCBCHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEEeCccCCcchhhHHHHHHhcCCCCCCcCHHHHHHH
Confidence 34557999999999999999999998888887765521 111122234676666665565443
No 280
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=24.00 E-value=1.6e+02 Score=19.50 Aligned_cols=33 Identities=12% Similarity=0.159 Sum_probs=22.2
Q ss_pred hhHHHHHHHHhCCCceEEEecCCHHHHHHHHHcC
Q psy11337 98 DSCFERIVTRFGRKCTYVVIGDGQDEEAAAKQRN 131 (155)
Q Consensus 98 escFerI~~RFG~k~~yvvIGDG~eEe~aAk~~~ 131 (155)
.+..++|+++ ++.+..+++++..+++.+.+.+.
T Consensus 63 ~~~~~~l~~~-~~~~pii~ls~~~~~~~~~~~~~ 95 (155)
T 1qkk_A 63 LALFRKILAL-DPDLPMILVTGHGDIPMAVQAIQ 95 (155)
T ss_dssp HHHHHHHHHH-CTTSCEEEEECGGGHHHHHHHHH
T ss_pred HHHHHHHHhh-CCCCCEEEEECCCChHHHHHHHh
Confidence 4677888877 47788888887666555444433
No 281
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=23.92 E-value=85 Score=26.00 Aligned_cols=35 Identities=14% Similarity=0.190 Sum_probs=21.5
Q ss_pred CceEEEEeCC--CchHHHHHHHHhhcccccccCcccccc
Q psy11337 57 SCTNVIVITT--QLIPALSKIMLFGLSGIFDVENIYSST 93 (155)
Q Consensus 57 ~~vNVLVTt~--qLVpaLaK~LLygL~~~fpieNIYSa~ 93 (155)
..--++||.+ .+|..+|..+=||. -+|.|||++++
T Consensus 159 G~~v~ivSas~~~~v~~~a~~~~~~y--gIp~e~ViG~~ 195 (327)
T 4as2_A 159 GIEVYVISAAHEELVRMVAADPRYGY--NAKPENVIGVT 195 (327)
T ss_dssp TCEEEEEEEEEHHHHHHHHTCGGGSC--CCCGGGEEEEC
T ss_pred CCEEEEEeCCcHHHHHHHHhhccccc--CCCHHHeEeee
Confidence 3444566655 56666776553333 37889999864
No 282
>1l7b_A DNA ligase; BRCT, autostructure, structural genomics, NESG, PSI, protein structure initiative, northeast structural genomics consortium; HET: DNA; NMR {Thermus thermophilus} SCOP: c.15.1.2
Probab=23.90 E-value=21 Score=24.83 Aligned_cols=28 Identities=25% Similarity=0.449 Sum_probs=20.0
Q ss_pred CCceEEEecCCHH-HHHHHHHcCCceeEe
Q psy11337 110 RKCTYVVIGDGQD-EEAAAKQRNFPFWRI 137 (155)
Q Consensus 110 ~k~~yvvIGDG~e-Ee~aAk~~~~PFwrI 137 (155)
+|.+|+|+|+..- --+-|+++++|.+.-
T Consensus 43 kkt~~LV~g~~~gsK~~kA~~lgI~Ii~E 71 (92)
T 1l7b_A 43 RKTSYLVVGENPGSKLEKARALGVPTLTE 71 (92)
T ss_dssp SSCCCBEECSSSSTTHHHHHCSSSCCEEH
T ss_pred CCeeEEEeCCCCChHHHHHHHcCCcEEeH
Confidence 5789999997432 234678889887753
No 283
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=23.86 E-value=1.8e+02 Score=21.70 Aligned_cols=36 Identities=19% Similarity=0.280 Sum_probs=27.2
Q ss_pred ccCccccccccChhhHHHHHHHHhCC-CceEEEecCC
Q psy11337 85 DVENIYSSTKIGKDSCFERIVTRFGR-KCTYVVIGDG 120 (155)
Q Consensus 85 pieNIYSa~k~GKescFerI~~RFG~-k~~yvvIGDG 120 (155)
|-...|+++|.+=+...+.+...+++ .++..+|.-|
T Consensus 148 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG 184 (247)
T 1uzm_A 148 GNQANYAASKAGVIGMARSIARELSKANVTANVVAPG 184 (247)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeC
Confidence 34567999999999888888888853 5777777544
No 284
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=23.80 E-value=2e+02 Score=22.06 Aligned_cols=62 Identities=16% Similarity=0.181 Sum_probs=39.3
Q ss_pred ccCccccccccChhhHHHHHHHHhCC-CceEEEecCCH------------HHHHHHHHcCCceeEecccccHHHH
Q psy11337 85 DVENIYSSTKIGKDSCFERIVTRFGR-KCTYVVIGDGQ------------DEEAAAKQRNFPFWRISSRSDLAAL 146 (155)
Q Consensus 85 pieNIYSa~k~GKescFerI~~RFG~-k~~yvvIGDG~------------eEe~aAk~~~~PFwrI~~~~Dl~~L 146 (155)
|-...|+++|.+=+.-.+.+...+++ .++..+|.-|. ++....-....|.-|...-.|+...
T Consensus 173 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~ 247 (273)
T 3uf0_A 173 RNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGP 247 (273)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHH
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 33568999999999988888888864 47777765441 1111222234666666665665544
No 285
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=23.70 E-value=2e+02 Score=21.91 Aligned_cols=63 Identities=19% Similarity=0.127 Sum_probs=40.6
Q ss_pred ccCccccccccChhhHHHHHHHHhCC-CceEEEecCCH------------HHHHHHHHcCCceeEecccccHHHHH
Q psy11337 85 DVENIYSSTKIGKDSCFERIVTRFGR-KCTYVVIGDGQ------------DEEAAAKQRNFPFWRISSRSDLAALY 147 (155)
Q Consensus 85 pieNIYSa~k~GKescFerI~~RFG~-k~~yvvIGDG~------------eEe~aAk~~~~PFwrI~~~~Dl~~L~ 147 (155)
|-...|+++|.+=+.--+.+...+++ .++..+|.-|. ++....-....|..|...-.|+....
T Consensus 159 ~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~ 234 (281)
T 3svt_A 159 RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMA 234 (281)
T ss_dssp TTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHH
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 44568999999999999999999964 47777775441 11112223346777766656665543
No 286
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=23.60 E-value=1.1e+02 Score=23.27 Aligned_cols=63 Identities=22% Similarity=0.223 Sum_probs=38.8
Q ss_pred ccCccccccccChhhHHHHHHHHhC-CCceEEEecCCH----------HHHHHHHHcCCceeEecccccHHHHH
Q psy11337 85 DVENIYSSTKIGKDSCFERIVTRFG-RKCTYVVIGDGQ----------DEEAAAKQRNFPFWRISSRSDLAALY 147 (155)
Q Consensus 85 pieNIYSa~k~GKescFerI~~RFG-~k~~yvvIGDG~----------eEe~aAk~~~~PFwrI~~~~Dl~~L~ 147 (155)
|-...|+++|.+=+.-.+.+...++ ++++..+|.-|. ++....-....|.-|+..-.|+....
T Consensus 174 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~i 247 (271)
T 4iin_A 174 MGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLGSAKEVAEAV 247 (271)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------CGGGCTTCSCBCHHHHHHHH
T ss_pred CCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHHHHHhcCCcCCCcCHHHHHHHH
Confidence 4456899999999998998988884 568877776542 11122222345665655555555443
No 287
>2efe_B Small GTP-binding protein-like; GEF, GTPase, VPS9, nucleotide, transport protein; HET: GNH; 2.08A {Arabidopsis thaliana} PDB: 2efd_B 2efc_B* 2efh_B*
Probab=23.57 E-value=1.7e+02 Score=19.69 Aligned_cols=51 Identities=10% Similarity=0.283 Sum_probs=33.1
Q ss_pred HHHHHHHhCCCceEEEecCCHH-----------HHHHHHHcCCceeEecccc--cHHHHHHHhh
Q psy11337 101 FERIVTRFGRKCTYVVIGDGQD-----------EEAAAKQRNFPFWRISSRS--DLAALYHALD 151 (155)
Q Consensus 101 FerI~~RFG~k~~yvvIGDG~e-----------Ee~aAk~~~~PFwrI~~~~--Dl~~L~~al~ 151 (155)
++.+.+...+++.+++||.-.| -++-++..++||..+|+.. .+..+...+.
T Consensus 107 ~~~~~~~~~~~~p~i~v~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~g~gi~~l~~~l~ 170 (181)
T 2efe_B 107 VQELQAQGNPNMVMALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIA 170 (181)
T ss_dssp HHHHHHHSCTTCEEEEEEECTTCTTTCCSCHHHHHHHHHHTTCEEEECCSSSCTTHHHHHHHHH
T ss_pred HHHHHHhcCCCCcEEEEEECCcccccccCCHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHH
Confidence 3445555556788888874333 1235677899999999854 4666666553
No 288
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=23.44 E-value=92 Score=24.86 Aligned_cols=47 Identities=15% Similarity=0.222 Sum_probs=32.3
Q ss_pred ccccCccccccccChhhHHHHHHHHhCCC---ce-EEEecCCHHHHHHHHHcCCceeE
Q psy11337 83 IFDVENIYSSTKIGKDSCFERIVTRFGRK---CT-YVVIGDGQDEEAAAKQRNFPFWR 136 (155)
Q Consensus 83 ~fpieNIYSa~k~GKescFerI~~RFG~k---~~-yvvIGDG~eEe~aAk~~~~PFwr 136 (155)
-+|-.|+|+.+|.--|.--..+.+++|-+ ++ +.|+|-+.+ -.+|.|.
T Consensus 146 ~~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~-------~~~~~~~ 196 (327)
T 1y7t_A 146 GLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS-------TMFPDLF 196 (327)
T ss_dssp TSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST-------TCEEECS
T ss_pred CCChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC-------eEEEEee
Confidence 46778999998876666555677788844 55 468997643 2467664
No 289
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=23.38 E-value=1.6e+02 Score=22.18 Aligned_cols=36 Identities=17% Similarity=0.201 Sum_probs=26.5
Q ss_pred cccCccccccccChhhHHHHHHHHhCC-CceEEEecC
Q psy11337 84 FDVENIYSSTKIGKDSCFERIVTRFGR-KCTYVVIGD 119 (155)
Q Consensus 84 fpieNIYSa~k~GKescFerI~~RFG~-k~~yvvIGD 119 (155)
+|-...|+++|.+=+.-.+.+...+++ +++.++|.-
T Consensus 145 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P 181 (281)
T 3m1a_A 145 FAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEP 181 (281)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEec
Confidence 345678999999998888888888754 466655533
No 290
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=23.33 E-value=2.4e+02 Score=21.30 Aligned_cols=64 Identities=11% Similarity=0.142 Sum_probs=41.9
Q ss_pred cccCccccccccChhhHHHHHHHHhCC-CceEEEecCCH------------HHHHHHHHcCCceeEecccccHHHHH
Q psy11337 84 FDVENIYSSTKIGKDSCFERIVTRFGR-KCTYVVIGDGQ------------DEEAAAKQRNFPFWRISSRSDLAALY 147 (155)
Q Consensus 84 fpieNIYSa~k~GKescFerI~~RFG~-k~~yvvIGDG~------------eEe~aAk~~~~PFwrI~~~~Dl~~L~ 147 (155)
.|-...|+++|.+=+.--+.+...+++ .++..+|.-|. ++....-....|.-|+..-.|+....
T Consensus 165 ~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v 241 (266)
T 4egf_A 165 LPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAV 241 (266)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 344567999999999988888888864 47777765441 12222333457777776666655543
No 291
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=23.26 E-value=1.1e+02 Score=25.18 Aligned_cols=44 Identities=11% Similarity=0.119 Sum_probs=36.3
Q ss_pred CCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHh
Q psy11337 65 TTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRF 108 (155)
Q Consensus 65 t~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RF 108 (155)
-++|+...++++-.---.+|=+|||-+-....|..-|+.|.+.|
T Consensus 97 r~~L~~~~~r~i~~~~P~~~~~ENV~gl~~~~~~~~~~~i~~~l 140 (327)
T 2c7p_A 97 RGTLFFDIARIVREKKPKVVFMENVKNFASHDNGNTLEVVKNTM 140 (327)
T ss_dssp TSCHHHHHHHHHHHHCCSEEEEEEEGGGGTGGGGHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhccCcEEEEeCcHHHHhccccHHHHHHHHHH
Confidence 35799999998888777889999999988777778888888654
No 292
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=23.16 E-value=73 Score=21.65 Aligned_cols=38 Identities=16% Similarity=0.225 Sum_probs=24.4
Q ss_pred hHHHHHHHHhCCCceEEEecCCHHHHHHHHHcC---CceeEe
Q psy11337 99 SCFERIVTRFGRKCTYVVIGDGQDEEAAAKQRN---FPFWRI 137 (155)
Q Consensus 99 scFerI~~RFG~k~~yvvIGDG~eEe~aAk~~~---~PFwrI 137 (155)
.-|+++.+.|+.++.|+.|--. +..+.+++++ +|...+
T Consensus 75 p~l~~~~~~~~~~~~~~~vd~~-~~~~l~~~~~v~~~Pt~~~ 115 (148)
T 3p2a_A 75 PIFAETAAERAGKVRFVKVNTE-AEPALSTRFRIRSIPTIML 115 (148)
T ss_dssp HHHHHHHHHTTTTCEEEEEETT-TCHHHHHHTTCCSSSEEEE
T ss_pred HHHHHHHHHcCCceEEEEEECc-CCHHHHHHCCCCccCEEEE
Confidence 4578888888878888887443 4445566544 454433
No 293
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=23.15 E-value=1.1e+02 Score=23.53 Aligned_cols=50 Identities=12% Similarity=0.112 Sum_probs=24.2
Q ss_pred HHHHHHHHhCCCceEEEecCCHHH--HHHHHHc-C-CceeEe---cccccHHHHHHHhh
Q psy11337 100 CFERIVTRFGRKCTYVVIGDGQDE--EAAAKQR-N-FPFWRI---SSRSDLAALYHALD 151 (155)
Q Consensus 100 cFerI~~RFG~k~~yvvIGDG~eE--e~aAk~~-~-~PFwrI---~~~~Dl~~L~~al~ 151 (155)
.|+++.+++ +++. +++|+|.++ ++..+++ + .+-+.+ -.+.|+..++.+.+
T Consensus 228 a~~~l~~~~-~~~~-~i~~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad 284 (375)
T 3beo_A 228 AIKRLVDKH-EDVQ-VVYPVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSY 284 (375)
T ss_dssp HHHHHHHHC-TTEE-EEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCS
T ss_pred HHHHHHhhC-CCeE-EEEeCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCc
Confidence 445555544 5677 455777442 2222322 2 233333 23346777766654
No 294
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=23.14 E-value=46 Score=23.43 Aligned_cols=43 Identities=19% Similarity=0.245 Sum_probs=26.3
Q ss_pred CCceEEEecCCHHHHH---HHH--Hc----CCceeEecccccHHHHHHHhhc
Q psy11337 110 RKCTYVVIGDGQDEEA---AAK--QR----NFPFWRISSRSDLAALYHALDN 152 (155)
Q Consensus 110 ~k~~yvvIGDG~eEe~---aAk--~~----~~PFwrI~~~~Dl~~L~~al~~ 152 (155)
+++.+++||+|.+.++ .++ .. ++-|..--.+.++..++.+.+.
T Consensus 49 ~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adi 100 (177)
T 2f9f_A 49 QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKG 100 (177)
T ss_dssp TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSE
T ss_pred CCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCCE
Confidence 6899999999977432 233 32 3445444445557777776543
No 295
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=23.13 E-value=1.8e+02 Score=22.46 Aligned_cols=82 Identities=7% Similarity=0.105 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHH
Q psy11337 24 REEWLQLRAEIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFER 103 (155)
Q Consensus 24 r~~w~~lr~e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFer 103 (155)
.+.|.+. ++.-..+=+...+.++.....+....=|.++|..- . .-+|-...|+++|.+=+.-.+.
T Consensus 122 ~~~~~~~---~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~-----------~-~~~~~~~~Y~asKaa~~~l~~~ 186 (277)
T 4dqx_A 122 EETWDRI---MSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTA-----------T-SAIADRTAYVASKGAISSLTRA 186 (277)
T ss_dssp HHHHHHH---HHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGG-----------T-SCCTTBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH---HHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhh-----------C-cCCCCChhHHHHHHHHHHHHHH
Confidence 3455443 34444444445556666654443333334444221 1 1134456899999999888888
Q ss_pred HHHHhCC-CceEEEecCC
Q psy11337 104 IVTRFGR-KCTYVVIGDG 120 (155)
Q Consensus 104 I~~RFG~-k~~yvvIGDG 120 (155)
+...+++ +++..+|.-|
T Consensus 187 la~e~~~~gi~vn~v~PG 204 (277)
T 4dqx_A 187 MAMDHAKEGIRVNAVAPG 204 (277)
T ss_dssp HHHHHGGGTEEEEEEEEC
T ss_pred HHHHhhhcCeEEEEEeeC
Confidence 8888864 4777777654
No 296
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=23.05 E-value=2e+02 Score=21.58 Aligned_cols=78 Identities=9% Similarity=0.009 Sum_probs=44.2
Q ss_pred HHHhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHHhC-
Q psy11337 31 RAEIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTRFG- 109 (155)
Q Consensus 31 r~e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~RFG- 109 (155)
...++.-..+-+...+.++.....+....=|.++|..- . .-.|-...|+++|.+=+.-.+.+...++
T Consensus 132 ~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~-----------~-~~~~~~~~Y~asKaa~~~l~~~la~e~~~ 199 (262)
T 3rkr_A 132 DALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAG-----------K-NPVADGAAYTASKWGLNGLMTSAAEELRQ 199 (262)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCS-----------S-CCCTTCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhh-----------c-CCCCCCchHHHHHHHHHHHHHHHHHHhhh
Confidence 33444444455555566666554443333334444321 1 1134457899999998888888888874
Q ss_pred CCceEEEecCC
Q psy11337 110 RKCTYVVIGDG 120 (155)
Q Consensus 110 ~k~~yvvIGDG 120 (155)
.+++..+|.-|
T Consensus 200 ~gi~v~~v~PG 210 (262)
T 3rkr_A 200 HQVRVSLVAPG 210 (262)
T ss_dssp GTCEEEEEEEC
T ss_pred cCcEEEEEecC
Confidence 34666665433
No 297
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=22.92 E-value=1.5e+02 Score=24.98 Aligned_cols=87 Identities=23% Similarity=0.195 Sum_probs=56.4
Q ss_pred hHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCcccc------ccccChhhHHHHHHHHhCCCc
Q psy11337 39 DNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYS------STKIGKDSCFERIVTRFGRKC 112 (155)
Q Consensus 39 d~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYS------a~k~GKescFerI~~RFG~k~ 112 (155)
+.|...|.++++.|.+|.+ +-|||=-|.| -.|-||+|+...-+.+.-.- ....|.+.+++++++.
T Consensus 82 ~~f~~~a~~~i~~i~~~g~-~pilVGGTgl---Yi~all~gl~~~p~~~~~~R~~l~~~~~~~g~~~l~~~L~~~----- 152 (316)
T 3foz_A 82 ADFRRDALAEMADITAAGR-IPLLVGGTML---YFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEV----- 152 (316)
T ss_dssp HHHHHHHHHHHHHHHHTTC-EEEEEESCHH---HHHHHHSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHHHHHhCCC-cEEEEcCcHH---HHHHHHcCcCCCCCCCHHHHHHHHHHHHhcCHHHHHHHHHHh-----
Confidence 5788999999999988854 4477777766 46778899865433321110 1123666666666542
Q ss_pred eEEEecCCHHHHHHHHHcCCceeEecccccHHHHHHHhhc
Q psy11337 113 TYVVIGDGQDEEAAAKQRNFPFWRISSRSDLAALYHALDN 152 (155)
Q Consensus 113 ~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~~L~~al~~ 152 (155)
|.+.|++.+ -+|..++.+|||-
T Consensus 153 ---------DP~~A~ri~---------pnd~~Ri~RALEV 174 (316)
T 3foz_A 153 ---------DPVAAARIH---------PNDPQRLSRALEV 174 (316)
T ss_dssp ---------CHHHHHHSC---------TTCHHHHHHHHHH
T ss_pred ---------CHHHHhhCC---------CccHHHHHHHHHH
Confidence 556666654 2677888888774
No 298
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=22.91 E-value=22 Score=29.35 Aligned_cols=42 Identities=17% Similarity=0.370 Sum_probs=31.0
Q ss_pred hhHHHHHHHHh--CC-Cce-EEEecCCHH-HHHHHHHcCCceeEecc
Q psy11337 98 DSCFERIVTRF--GR-KCT-YVVIGDGQD-EEAAAKQRNFPFWRISS 139 (155)
Q Consensus 98 escFerI~~RF--G~-k~~-yvvIGDG~e-Ee~aAk~~~~PFwrI~~ 139 (155)
-+|++-|..|. |. ++. =+||++..+ =.+.|+++|+||..+..
T Consensus 99 g~nl~~ll~~~~~g~l~~~i~~Visn~~~a~~~~A~~~gIp~~~~~~ 145 (287)
T 3nrb_A 99 DHCLGDLLYRHRLGELDMEVVGIISNHPREALSVSLVGDIPFHYLPV 145 (287)
T ss_dssp CHHHHHHHHHHHHTSSCCEEEEEEESSCGGGCCCCCCTTSCEEECCC
T ss_pred CcCHHHHHHHHHCCCCCeEEEEEEeCChHHHHHHHHHcCCCEEEEec
Confidence 39999999988 53 233 356777766 44568999999998863
No 299
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=22.86 E-value=1.6e+02 Score=19.52 Aligned_cols=32 Identities=3% Similarity=-0.050 Sum_probs=19.1
Q ss_pred hhHHHHHHHHhCCCceEEEecCCHHHHHHHHHc
Q psy11337 98 DSCFERIVTRFGRKCTYVVIGDGQDEEAAAKQR 130 (155)
Q Consensus 98 escFerI~~RFG~k~~yvvIGDG~eEe~aAk~~ 130 (155)
....++|++++ +.+..+++++..+++...+.+
T Consensus 77 ~~~~~~l~~~~-~~~~ii~~s~~~~~~~~~~~~ 108 (152)
T 3eul_A 77 AQVAAAVRSYE-LPTRVLLISAHDEPAIVYQAL 108 (152)
T ss_dssp HHHHHHHHHTT-CSCEEEEEESCCCHHHHHHHH
T ss_pred HHHHHHHHhcC-CCCeEEEEEccCCHHHHHHHH
Confidence 45566676664 666777777766655543333
No 300
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=22.66 E-value=1.7e+02 Score=19.33 Aligned_cols=33 Identities=18% Similarity=0.261 Sum_probs=22.9
Q ss_pred hhhHHHHHHHHhCCCceEEEecCCHHHHHHHHHc
Q psy11337 97 KDSCFERIVTRFGRKCTYVVIGDGQDEEAAAKQR 130 (155)
Q Consensus 97 KescFerI~~RFG~k~~yvvIGDG~eEe~aAk~~ 130 (155)
-....++|++++ +.+..+++++..+.+...+.+
T Consensus 66 g~~~~~~l~~~~-~~~~ii~ls~~~~~~~~~~~~ 98 (154)
T 2rjn_A 66 GEVFLEQVAKSY-PDIERVVISGYADAQATIDAV 98 (154)
T ss_dssp HHHHHHHHHHHC-TTSEEEEEECGGGHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCcEEEEecCCCHHHHHHHH
Confidence 356778888875 678888888776665555444
No 301
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=22.60 E-value=1.8e+02 Score=21.93 Aligned_cols=83 Identities=13% Similarity=0.034 Sum_probs=48.8
Q ss_pred hHHHHHHHHHHhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHH
Q psy11337 23 KREEWLQLRAEIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFE 102 (155)
Q Consensus 23 ~r~~w~~lr~e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFe 102 (155)
..+.|.+. ++.-..+=+..++.++.....+....=|.++|..=. .-.|-...|+++|.+=+.-.+
T Consensus 107 ~~~~~~~~---~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~------------~~~~~~~~Y~asKaa~~~l~~ 171 (265)
T 3lf2_A 107 TDEAWSEE---LQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLAS------------QPEPHMVATSAARAGVKNLVR 171 (265)
T ss_dssp CHHHHHHH---HHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGT------------SCCTTBHHHHHHHHHHHHHHH
T ss_pred CHHHHHHH---HHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccC------------CCCCCchhhHHHHHHHHHHHH
Confidence 34455443 344444444455666666555444444445543211 113445789999999999889
Q ss_pred HHHHHhCC-CceEEEecCC
Q psy11337 103 RIVTRFGR-KCTYVVIGDG 120 (155)
Q Consensus 103 rI~~RFG~-k~~yvvIGDG 120 (155)
.+...+++ +++..+|.-|
T Consensus 172 ~la~e~~~~gi~vn~v~PG 190 (265)
T 3lf2_A 172 SMAFEFAPKGVRVNGILIG 190 (265)
T ss_dssp HHHHHHGGGTEEEEEEEEC
T ss_pred HHHHHhcccCeEEEEEEeC
Confidence 88888865 4777666544
No 302
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=22.53 E-value=70 Score=20.55 Aligned_cols=34 Identities=18% Similarity=0.120 Sum_probs=20.3
Q ss_pred hhHHHHHHHHhCCCceEEEecCCHHHHH--HHHHcCC
Q psy11337 98 DSCFERIVTRFGRKCTYVVIGDGQDEEA--AAKQRNF 132 (155)
Q Consensus 98 escFerI~~RFG~k~~yvvIGDG~eEe~--aAk~~~~ 132 (155)
.+..++|++++ +++..+++++..+.+. .|.+.|.
T Consensus 67 ~~~~~~l~~~~-~~~~ii~~t~~~~~~~~~~~~~~g~ 102 (130)
T 3eod_A 67 LKLLEHIRNRG-DQTPVLVISATENMADIAKALRLGV 102 (130)
T ss_dssp HHHHHHHHHTT-CCCCEEEEECCCCHHHHHHHHHHCC
T ss_pred HHHHHHHHhcC-CCCCEEEEEcCCCHHHHHHHHHcCC
Confidence 45667777754 5667777776655553 3444443
No 303
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=22.43 E-value=1.4e+02 Score=19.28 Aligned_cols=53 Identities=4% Similarity=-0.048 Sum_probs=30.2
Q ss_pred hhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCCceeEecc-cccHHHHHHHh
Q psy11337 98 DSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPFWRISS-RSDLAALYHAL 150 (155)
Q Consensus 98 escFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~-~~Dl~~L~~al 150 (155)
.+..++|++++. +.+..+++++..+.+...+.+.....-+=. --+...|..++
T Consensus 75 ~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~L~~~~ 129 (143)
T 2qvg_A 75 IEFLKELRDDSSFTDIEVFVLTAAYTSKDKLAFESLNIRGHLIKPLDYGEAIKLF 129 (143)
T ss_dssp HHHHHHHTTSGGGTTCEEEEEESCCCHHHHHHHTTTTCCEEEESSCCHHHHHHHH
T ss_pred HHHHHHHHcCccccCCcEEEEeCCCCHHHHHHHHhcCCCeEEECCCCHHHHHHHH
Confidence 456677777663 677788887776666655555544433222 22444454443
No 304
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=22.41 E-value=1.9e+02 Score=22.45 Aligned_cols=82 Identities=11% Similarity=-0.067 Sum_probs=48.4
Q ss_pred HHHHHHhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHHHHHH
Q psy11337 28 LQLRAEIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFERIVTR 107 (155)
Q Consensus 28 ~~lr~e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFerI~~R 107 (155)
.++...++.-..+-+...+.++.....+...-.|+.+|+... .. -.|-...|+++|.+=+.-.+.+...
T Consensus 130 ~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~----------~~-~~~~~~~Y~asKaa~~~~~~~la~e 198 (301)
T 3tjr_A 130 DDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAG----------LV-PNAGLGTYGVAKYGVVGLAETLARE 198 (301)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG----------TS-CCTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhh----------cC-CCCCchHHHHHHHHHHHHHHHHHHH
Confidence 334444555555555566666666544432233443333211 11 1344568999999999999999988
Q ss_pred hCC-CceEEEecCC
Q psy11337 108 FGR-KCTYVVIGDG 120 (155)
Q Consensus 108 FG~-k~~yvvIGDG 120 (155)
+++ .++..+|.-|
T Consensus 199 ~~~~gi~v~~v~PG 212 (301)
T 3tjr_A 199 VKPNGIGVSVLCPM 212 (301)
T ss_dssp HGGGTEEEEEECCS
T ss_pred hcccCcEEEEEECC
Confidence 854 5777777544
No 305
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=22.32 E-value=76 Score=22.48 Aligned_cols=37 Identities=14% Similarity=0.156 Sum_probs=24.5
Q ss_pred HHHHHHHhC-CCceEEEec---------CCHHH-HHHHHHcCCceeEe
Q psy11337 101 FERIVTRFG-RKCTYVVIG---------DGQDE-EAAAKQRNFPFWRI 137 (155)
Q Consensus 101 FerI~~RFG-~k~~yvvIG---------DG~eE-e~aAk~~~~PFwrI 137 (155)
++++.++|+ +++.++.|. |..++ .+.+++++++|--+
T Consensus 69 l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~ 116 (183)
T 2obi_A 69 LVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMF 116 (183)
T ss_dssp HHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEB
T ss_pred HHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEE
Confidence 788899995 569999995 22232 23467777776444
No 306
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=22.24 E-value=76 Score=23.49 Aligned_cols=36 Identities=14% Similarity=0.091 Sum_probs=23.0
Q ss_pred HHHHHhCCCceEEEecCCHH----HHHHHHHcCCceeEecccc
Q psy11337 103 RIVTRFGRKCTYVVIGDGQD----EEAAAKQRNFPFWRISSRS 141 (155)
Q Consensus 103 rI~~RFG~k~~yvvIGDG~e----Ee~aAk~~~~PFwrI~~~~ 141 (155)
.|.+++|-|+||.|+|.-.+ +-+...+.| +-|.+|+
T Consensus 24 ~iL~~~~v~aTfFv~g~~~~~~~~~~~~~~~~G---heIg~Ht 63 (195)
T 2cc0_A 24 NALRQNGLRATMFNQGQYAAQNPSLVRAQVDAG---MWVANHS 63 (195)
T ss_dssp HHHHHTTCCCEEEECHHHHHHCHHHHHHHHHTT---CEEEECC
T ss_pred HHHHHcCCCEEEEecChhhhhCHHHHHHHHHCC---CEEEcCC
Confidence 46678999999999997543 333333444 4555553
No 307
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=22.22 E-value=1.4e+02 Score=19.82 Aligned_cols=33 Identities=9% Similarity=0.124 Sum_probs=20.8
Q ss_pred hhHHHHHHHHh-CCCceEEEecCCHHHHHHHHHc
Q psy11337 98 DSCFERIVTRF-GRKCTYVVIGDGQDEEAAAKQR 130 (155)
Q Consensus 98 escFerI~~RF-G~k~~yvvIGDG~eEe~aAk~~ 130 (155)
....++|++.. .+++..+++.+..+++...+.+
T Consensus 75 ~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~ 108 (152)
T 3heb_A 75 IDILKLVKENPHTRRSPVVILTTTDDQREIQRCY 108 (152)
T ss_dssp HHHHHHHHHSTTTTTSCEEEEESCCCHHHHHHHH
T ss_pred HHHHHHHHhcccccCCCEEEEecCCCHHHHHHHH
Confidence 46677887743 5677777777766655544333
No 308
>1lw3_A Myotubularin-related protein 2; protein-phosphate complex, hydrolase; 2.30A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1m7r_A
Probab=21.94 E-value=39 Score=31.68 Aligned_cols=38 Identities=29% Similarity=0.402 Sum_probs=26.8
Q ss_pred hHHHHHHHHHHhhh---hc--CCCceEEEEe-------CCCchHHHHHHHH
Q psy11337 39 DNWLSLAIKCLTLI---NQ--RPSCTNVIVI-------TTQLIPALSKIML 77 (155)
Q Consensus 39 d~WLs~A~k~L~~i---~~--r~~~vNVLVT-------t~qLVpaLaK~LL 77 (155)
.+||.+.+.+|+.. .. ..+..+|||- |.| |-+||++||
T Consensus 389 S~WL~hI~~iL~~A~~ia~~l~~~~~sVLVhcsDGwDrT~q-lsSLaQLlL 438 (657)
T 1lw3_A 389 THWLEHIKLILAGALRIADKVESGKTSVVVHSSDGWDRTAQ-LTSLAMLML 438 (657)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECSSSSSHHHH-HHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHcCCceEEEECCCCccchHH-HHHHHHHHh
Confidence 47999888888762 11 1344788887 444 569999998
No 309
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=21.89 E-value=1.2e+02 Score=19.62 Aligned_cols=38 Identities=13% Similarity=0.074 Sum_probs=23.7
Q ss_pred HHHHHHHHhC-CCceEEEecCCH------HHHHHHHHcCCceeEe
Q psy11337 100 CFERIVTRFG-RKCTYVVIGDGQ------DEEAAAKQRNFPFWRI 137 (155)
Q Consensus 100 cFerI~~RFG-~k~~yvvIGDG~------eEe~aAk~~~~PFwrI 137 (155)
-++++.++|+ .++.++.|.-.. +-.+.+++++++|--+
T Consensus 55 ~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~ 99 (145)
T 3erw_A 55 QFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIV 99 (145)
T ss_dssp HHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEE
T ss_pred HHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEE
Confidence 3778888996 788888885422 2223455666665433
No 310
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=21.84 E-value=1.1e+02 Score=21.87 Aligned_cols=36 Identities=14% Similarity=0.121 Sum_probs=23.7
Q ss_pred HHHHHHHhC-CCceEEEecC---------CHHH-HHHHHHcCCceeE
Q psy11337 101 FERIVTRFG-RKCTYVVIGD---------GQDE-EAAAKQRNFPFWR 136 (155)
Q Consensus 101 FerI~~RFG-~k~~yvvIGD---------G~eE-e~aAk~~~~PFwr 136 (155)
++++.++|+ +++.++.|.- ..++ .+.+++++++|--
T Consensus 71 l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~~~p~ 117 (185)
T 2gs3_A 71 LVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDM 117 (185)
T ss_dssp HHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHTTCCSEE
T ss_pred HHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHHHHcCCCCee
Confidence 778889995 5599999851 2222 3456777777533
No 311
>3dz8_A RAS-related protein RAB-3B; GDP, GTPase, structural genomics consortium, SGC, cell GTP-binding, lipoprotein, membrane, methylation; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=21.82 E-value=2.1e+02 Score=19.92 Aligned_cols=51 Identities=20% Similarity=0.309 Sum_probs=32.8
Q ss_pred HHHHHHHHhCCCceEEEecCCHH-----------HHHHHHHcCCceeEecccc--cHHHHHHHh
Q psy11337 100 CFERIVTRFGRKCTYVVIGDGQD-----------EEAAAKQRNFPFWRISSRS--DLAALYHAL 150 (155)
Q Consensus 100 cFerI~~RFG~k~~yvvIGDG~e-----------Ee~aAk~~~~PFwrI~~~~--Dl~~L~~al 150 (155)
.++.|.+...+++..++||.-.| .++.|+..++||..+|+.. .+..+...+
T Consensus 117 ~~~~i~~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~gi~~l~~~l 180 (191)
T 3dz8_A 117 WATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERL 180 (191)
T ss_dssp HHHHHHHHSCTTCEEEEEEECTTCGGGCCSCHHHHHHHHHHHTCEEEECBTTTTBSHHHHHHHH
T ss_pred HHHHHHHhcCCCCCEEEEEECCCCccccccCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHH
Confidence 34444444457888888875443 2346788999999999854 355554443
No 312
>2g9p_A Antimicrobial peptide latarcin 2A; helix-hinge-helix, antimicrobial protein; NMR {Synthetic}
Probab=21.74 E-value=31 Score=19.67 Aligned_cols=13 Identities=38% Similarity=0.976 Sum_probs=10.7
Q ss_pred HHHHHHHHhCCCc
Q psy11337 100 CFERIVTRFGRKC 112 (155)
Q Consensus 100 cFerI~~RFG~k~ 112 (155)
-|..+..+||||.
T Consensus 2 lfgklikkfgrka 14 (26)
T 2g9p_A 2 LFGKLIKKFGRKA 14 (26)
T ss_dssp HHHHHHHHHTSHH
T ss_pred cHHHHHHHHhHHH
Confidence 4788999999983
No 313
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=21.72 E-value=1.2e+02 Score=21.25 Aligned_cols=19 Identities=21% Similarity=0.361 Sum_probs=14.2
Q ss_pred HHHHHHHHhCCCceEEEec
Q psy11337 100 CFERIVTRFGRKCTYVVIG 118 (155)
Q Consensus 100 cFerI~~RFG~k~~yvvIG 118 (155)
-++++.++|+.++.++.|.
T Consensus 54 ~l~~l~~~~~~~~~~v~v~ 72 (188)
T 2cvb_A 54 ELVALAERYRGKVAFVGIN 72 (188)
T ss_dssp HHHHHHHHTTTTEEEEEEE
T ss_pred HHHHHHHHhhcCeEEEEEE
Confidence 3678888886558888886
No 314
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=21.66 E-value=98 Score=19.85 Aligned_cols=34 Identities=9% Similarity=0.067 Sum_probs=20.4
Q ss_pred hhhHHHHHHHHhCCCceEEEecCCHHHHHHHHHcC
Q psy11337 97 KDSCFERIVTRFGRKCTYVVIGDGQDEEAAAKQRN 131 (155)
Q Consensus 97 KescFerI~~RFG~k~~yvvIGDG~eEe~aAk~~~ 131 (155)
-.+..++|++++ +.+..+++++..+++...+.++
T Consensus 61 g~~~~~~l~~~~-~~~~ii~~s~~~~~~~~~~~~~ 94 (134)
T 3f6c_A 61 GIQVLETLRKRQ-YSGIIIIVSAKNDHFYGKHCAD 94 (134)
T ss_dssp HHHHHHHHHHTT-CCSEEEEEECC---CTHHHHHH
T ss_pred hHHHHHHHHhcC-CCCeEEEEeCCCChHHHHHHHH
Confidence 356778888775 5677888887777554444333
No 315
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=21.62 E-value=95 Score=21.84 Aligned_cols=18 Identities=17% Similarity=0.475 Sum_probs=14.2
Q ss_pred HHHHHHHhC-CCceEEEec
Q psy11337 101 FERIVTRFG-RKCTYVVIG 118 (155)
Q Consensus 101 FerI~~RFG-~k~~yvvIG 118 (155)
++++.++|+ +++.++.|.
T Consensus 68 l~~l~~~~~~~~v~vv~v~ 86 (196)
T 2ywi_A 68 LVRLANDYMPKGVSFVAIN 86 (196)
T ss_dssp HHHHHHHHGGGTCEEEEEE
T ss_pred HHHHHHHHHhCCcEEEEEE
Confidence 677888895 458988887
No 316
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=21.53 E-value=1.1e+02 Score=26.03 Aligned_cols=39 Identities=13% Similarity=0.144 Sum_probs=28.7
Q ss_pred HHHHHHhC-CCceEEEecCCHHHHHHHHHcCCc--eeEeccc
Q psy11337 102 ERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFP--FWRISSR 140 (155)
Q Consensus 102 erI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~P--FwrI~~~ 140 (155)
.++.++|| |-..|.++.+..|-.++|+++++| ++|.+.+
T Consensus 9 K~lL~~~GIpvp~~~~~~s~eea~~aa~~lG~P~vVvK~~~~ 50 (388)
T 2nu8_B 9 KQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVH 50 (388)
T ss_dssp HHHHHHTTCCCCCEEEESSHHHHHHHHHHHCSSCEEEEECCS
T ss_pred HHHHHHCCcCCCCeeEECCHHHHHHHHHHhCCCeEEEEEecC
Confidence 46778899 567788887655555688999999 6666653
No 317
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=21.53 E-value=1.7e+02 Score=18.81 Aligned_cols=53 Identities=15% Similarity=0.078 Sum_probs=29.9
Q ss_pred hhHHHHHHHHh---CCCceEEEecCCHHHHHHHHHcCCc-ee-EecccccHHHHHHHh
Q psy11337 98 DSCFERIVTRF---GRKCTYVVIGDGQDEEAAAKQRNFP-FW-RISSRSDLAALYHAL 150 (155)
Q Consensus 98 escFerI~~RF---G~k~~yvvIGDG~eEe~aAk~~~~P-Fw-rI~~~~Dl~~L~~al 150 (155)
....++|+++. .+.+..+++.+..+++...+.+... +. -|.---+...|..++
T Consensus 76 ~~~~~~l~~~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~~l~KP~~~~~L~~~i 133 (146)
T 3ilh_A 76 WELIDLFKQHFQPMKNKSIVCLLSSSLDPRDQAKAEASDWVDYYVSKPLTANALNNLY 133 (146)
T ss_dssp HHHHHHHHHHCGGGTTTCEEEEECSSCCHHHHHHHHHCSSCCEEECSSCCHHHHHHHH
T ss_pred HHHHHHHHHhhhhccCCCeEEEEeCCCChHHHHHHHhcCCcceeeeCCCCHHHHHHHH
Confidence 45667777753 5777778887776666655554443 22 233333445555444
No 318
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=21.48 E-value=2e+02 Score=21.77 Aligned_cols=109 Identities=10% Similarity=0.127 Sum_probs=60.8
Q ss_pred HHHHHHHHHHhHHhhhHHHHHHHHHHhhhhcCCCceEEEEeCCCchHHHHHHHHhhcccccccCccccccccChhhHHHH
Q psy11337 24 REEWLQLRAEIESVTDNWLSLAIKCLTLINQRPSCTNVIVITTQLIPALSKIMLFGLSGIFDVENIYSSTKIGKDSCFER 103 (155)
Q Consensus 24 r~~w~~lr~e~e~~Td~WLs~A~k~L~~i~~r~~~vNVLVTt~qLVpaLaK~LLygL~~~fpieNIYSa~k~GKescFer 103 (155)
.+.|.+ .++.-..+=+..++.++.....+....=|.++|.. +. ...|-...|+++|.+=+.-.+.
T Consensus 103 ~~~~~~---~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~-----------~~-~~~~~~~~Y~asKaa~~~l~~~ 167 (258)
T 3oid_A 103 ETHWDW---TMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLG-----------SI-RYLENYTTVGVSKAALEALTRY 167 (258)
T ss_dssp HHHHHH---HHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGG-----------GT-SBCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHH---HHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchh-----------hC-CCCCCcHHHHHHHHHHHHHHHH
Confidence 344443 34444444445556666665554443334444421 11 1134456899999999999999
Q ss_pred HHHHhCC-CceEEEecCCH------------HHHHHHHHcCCceeEecccccHHHHH
Q psy11337 104 IVTRFGR-KCTYVVIGDGQ------------DEEAAAKQRNFPFWRISSRSDLAALY 147 (155)
Q Consensus 104 I~~RFG~-k~~yvvIGDG~------------eEe~aAk~~~~PFwrI~~~~Dl~~L~ 147 (155)
+...+++ .++..+|.-|. ++....-....|.-|+..-.|+....
T Consensus 168 la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v 224 (258)
T 3oid_A 168 LAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTV 224 (258)
T ss_dssp HHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHH
T ss_pred HHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 9998865 47777775431 11112222346766666655655543
No 319
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=21.30 E-value=2.1e+02 Score=21.27 Aligned_cols=35 Identities=17% Similarity=0.200 Sum_probs=24.5
Q ss_pred ccCccccccccChhhHHHHHHHHhC-CCceEEEecC
Q psy11337 85 DVENIYSSTKIGKDSCFERIVTRFG-RKCTYVVIGD 119 (155)
Q Consensus 85 pieNIYSa~k~GKescFerI~~RFG-~k~~yvvIGD 119 (155)
|-...|+++|.+-+.-.+.+...++ +++++.+|--
T Consensus 159 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P 194 (266)
T 1xq1_A 159 SVGSIYSATKGALNQLARNLACEWASDGIRANAVAP 194 (266)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEC
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEee
Confidence 4467899999998888888888874 3466655543
No 320
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=21.29 E-value=1.2e+02 Score=20.86 Aligned_cols=51 Identities=18% Similarity=0.341 Sum_probs=33.8
Q ss_pred ccChhhHHHHHHHHhCCCceEEEecCCHHH------HHHHHHcCCceeEecccccHHHHHHHh
Q psy11337 94 KIGKDSCFERIVTRFGRKCTYVVIGDGQDE------EAAAKQRNFPFWRISSRSDLAALYHAL 150 (155)
Q Consensus 94 k~GKescFerI~~RFG~k~~yvvIGDG~eE------e~aAk~~~~PFwrI~~~~Dl~~L~~al 150 (155)
..|-.++.+.|++ .++..|+|..-.++ +..++..++|+..+.+. ..|=+|+
T Consensus 21 v~G~~~v~kai~~---gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~~s~---~eLG~A~ 77 (101)
T 3v7q_A 21 VSGEDLVIKEIRN---ARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKVESR---AVLGRSI 77 (101)
T ss_dssp EESHHHHHHHHHT---TCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEESCH---HHHHHHT
T ss_pred ccchhhhHHHHhc---CceeEEEEeccccccchhhhcccccccCCCeeeechH---HHHHhhh
Confidence 3566788888876 46777877765555 33567789999988444 4444443
No 321
>1wcw_A Uroporphyrinogen III synthase; congenital erythropoietic porph structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} PDB: 1wd7_A 1wcx_A
Probab=21.12 E-value=1.1e+02 Score=23.33 Aligned_cols=37 Identities=19% Similarity=0.214 Sum_probs=24.1
Q ss_pred CceEEEecCCHHHHHHHHHcCCceeEecccccHHHHHHHh
Q psy11337 111 KCTYVVIGDGQDEEAAAKQRNFPFWRISSRSDLAALYHAL 150 (155)
Q Consensus 111 k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~Dl~~L~~al 150 (155)
++.+++||. .+.++.+++|+.-..+. ..+...|-.++
T Consensus 91 ~~~i~avG~--~Ta~~l~~~G~~~~~~p-~~~~e~L~~~l 127 (261)
T 1wcw_A 91 KAFRLARGA--KAARALKEAGLPPHAVG-DGTSKSLLPLL 127 (261)
T ss_dssp HSEEEESSH--HHHHHHHHTTCCCSEEC-SSSHHHHGGGS
T ss_pred CCeEEEECH--HHHHHHHHcCCCCCccc-CccHHHHHHHH
Confidence 367788864 46778888888654454 55666665543
No 322
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=20.94 E-value=64 Score=21.10 Aligned_cols=53 Identities=8% Similarity=0.073 Sum_probs=28.3
Q ss_pred hhHHHHHHHHhC-CCceEEEecCCHHHHHHHHHcCCceeEecccc-cHHHHHHHh
Q psy11337 98 DSCFERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPFWRISSRS-DLAALYHAL 150 (155)
Q Consensus 98 escFerI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PFwrI~~~~-Dl~~L~~al 150 (155)
....++|+++.+ +.+..+++++..+++.+.+.+......+=..| +...|..++
T Consensus 62 ~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i 116 (140)
T 3n53_A 62 PNLCLKLKRSKGLKNVPLILLFSSEHKEAIVNGLHSGADDYLTKPFNRNDLLSRI 116 (140)
T ss_dssp -CHHHHHHTSTTCTTCCEEEEECC----CTTTTTTCCCSEEEESSCCHHHHHHHH
T ss_pred HHHHHHHHcCcccCCCCEEEEecCCCHHHHHHHHhcCCCeeeeCCCCHHHHHHHH
Confidence 345677888774 77888888887777766555554443322222 444444443
No 323
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=20.93 E-value=90 Score=26.66 Aligned_cols=38 Identities=13% Similarity=0.107 Sum_probs=28.7
Q ss_pred HHHHHHhC-CCceEEEecCCHHHHHHHHHcCCce-eEecc
Q psy11337 102 ERIVTRFG-RKCTYVVIGDGQDEEAAAKQRNFPF-WRISS 139 (155)
Q Consensus 102 erI~~RFG-~k~~yvvIGDG~eEe~aAk~~~~PF-wrI~~ 139 (155)
.++.++|| |-..+.++.+..|-.++|+++++|+ .|.++
T Consensus 9 K~lL~~~GIpvp~~~~~~s~eea~~aa~~lG~PvVvKa~~ 48 (397)
T 3ufx_B 9 KEILARYGVPVPPGKVAYTPEEAKRIAEEFGKRVVIKAQV 48 (397)
T ss_dssp HHHHHHTTCCCCCEEEESSHHHHHHHHHHHTSCEEEEECC
T ss_pred HHHHHHCCCCCCCeEEECCHHHHHHHHHHcCCCEEEEEcc
Confidence 46888999 6678888877655567899999994 45555
No 324
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=20.61 E-value=82 Score=24.37 Aligned_cols=36 Identities=14% Similarity=0.124 Sum_probs=23.6
Q ss_pred HHHHHhCCCceEEEecCCHH----HHHHHHHcCCceeEecccc
Q psy11337 103 RIVTRFGRKCTYVVIGDGQD----EEAAAKQRNFPFWRISSRS 141 (155)
Q Consensus 103 rI~~RFG~k~~yvvIGDG~e----Ee~aAk~~~~PFwrI~~~~ 141 (155)
.|.+++|-|+||.|+|+-.+ +-+...+.| +-|.+|+
T Consensus 63 ~iL~~~~v~ATfFv~g~~~~~~p~~~~~~~~~G---heIg~Ht 102 (240)
T 1ny1_A 63 DVLKKHRVTGTFFVTGHFVKDQPQLIKRMSDEG---HIIGNHS 102 (240)
T ss_dssp HHHHHTTCCCEEEECHHHHHHCHHHHHHHHHTT---CEEEECC
T ss_pred HHHHHcCCCEEEEEeChhhhhCHHHHHHHHHCc---CChhcCC
Confidence 46778999999999997543 333333444 4566553
No 325
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=20.61 E-value=1.3e+02 Score=22.68 Aligned_cols=34 Identities=9% Similarity=0.133 Sum_probs=25.3
Q ss_pred ccCccccccccChhhHHHHHHHHhCCCceEEEec
Q psy11337 85 DVENIYSSTKIGKDSCFERIVTRFGRKCTYVVIG 118 (155)
Q Consensus 85 pieNIYSa~k~GKescFerI~~RFG~k~~yvvIG 118 (155)
|-...|+++|.+=+.-.+.+...++++-+..+|.
T Consensus 182 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~~v~~v~ 215 (279)
T 3ctm_A 182 QLQAPYNTAKAACTHLAKSLAIEWAPFARVNTIS 215 (279)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEE
T ss_pred CCcccHHHHHHHHHHHHHHHHHHhcccCCEEEEe
Confidence 4456899999999998888888886433555554
No 326
>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A*
Probab=20.57 E-value=1.9e+02 Score=24.11 Aligned_cols=47 Identities=21% Similarity=0.264 Sum_probs=35.9
Q ss_pred cChhhHHHHHHHHhC-CCceEEEecCC--HHHHHHHHHcCCceeEeccccc
Q psy11337 95 IGKDSCFERIVTRFG-RKCTYVVIGDG--QDEEAAAKQRNFPFWRISSRSD 142 (155)
Q Consensus 95 ~GKescFerI~~RFG-~k~~yvvIGDG--~eEe~aAk~~~~PFwrI~~~~D 142 (155)
+-|+++ ..|.+.|. .+.+-.+||.| ..=-.|||++|+.+.-+...+|
T Consensus 2 ~~~~~~-~~~~~~~~~~~~~I~ilGs~l~~~l~~aAk~lG~~vi~vd~~~~ 51 (361)
T 2r7k_A 2 ISKDEI-LEIFDKYNKDEITIATLGSHTSLHILKGAKLEGFSTVCITMKGR 51 (361)
T ss_dssp CCHHHH-HHHHTTSCTTSCEEEEESSTTHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcHHHH-HHHHHhccccCCEEEEECcHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 346666 55666686 66888899986 4556799999999998887754
No 327
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=20.51 E-value=33 Score=27.02 Aligned_cols=60 Identities=15% Similarity=-0.019 Sum_probs=36.0
Q ss_pred HhhcccccccCccccccccChhhHHHHHHHHh---CCCceEE--EecCCHHHHHHHHHcCCceeEe
Q psy11337 77 LFGLSGIFDVENIYSSTKIGKDSCFERIVTRF---GRKCTYV--VIGDGQDEEAAAKQRNFPFWRI 137 (155)
Q Consensus 77 LygL~~~fpieNIYSa~k~GKescFerI~~RF---G~k~~yv--vIGDG~eEe~aAk~~~~PFwrI 137 (155)
+|++..-=-+.=+|+....||-.-.-+...|+ |.++-|+ .+++. .|.+.+..+++++-.+
T Consensus 5 ~~~~~~~G~i~litG~mGsGKTT~ll~~~~r~~~~g~kVli~~~~~d~r-~~~~i~srlG~~~~~~ 69 (223)
T 2b8t_A 5 NAFSKKIGWIEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKIDTR-SIRNIQSRTGTSLPSV 69 (223)
T ss_dssp ------CCEEEEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEECCCGG-GCSSCCCCCCCSSCCE
T ss_pred hhhccCCcEEEEEECCCCCcHHHHHHHHHHHHHhcCCEEEEEEeccCch-HHHHHHHhcCCCcccc
Confidence 44444433456678999999988777777777 6677665 44443 4446677777654433
No 328
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=20.51 E-value=83 Score=22.02 Aligned_cols=41 Identities=12% Similarity=0.138 Sum_probs=25.9
Q ss_pred HHHHHHHhC-CCceEEEecCCHH--H--HHHHHHcCCceeEecccc
Q psy11337 101 FERIVTRFG-RKCTYVVIGDGQD--E--EAAAKQRNFPFWRISSRS 141 (155)
Q Consensus 101 FerI~~RFG-~k~~yvvIGDG~e--E--e~aAk~~~~PFwrI~~~~ 141 (155)
++++.++|+ +++.++.|.-..+ | .+-+++++++.+.+-..+
T Consensus 82 l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~ 127 (186)
T 1jfu_A 82 LDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQ 127 (186)
T ss_dssp HHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECT
T ss_pred HHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECC
Confidence 678888996 7788888865433 1 445677776544443333
No 329
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=20.48 E-value=1.6e+02 Score=19.51 Aligned_cols=33 Identities=12% Similarity=0.043 Sum_probs=18.0
Q ss_pred hhHHHHHHHHhCCCceEEEecCCHHHHHHHHHcC
Q psy11337 98 DSCFERIVTRFGRKCTYVVIGDGQDEEAAAKQRN 131 (155)
Q Consensus 98 escFerI~~RFG~k~~yvvIGDG~eEe~aAk~~~ 131 (155)
....++|+++ .+.+..+++++..+++.+.+.+.
T Consensus 66 ~~~~~~l~~~-~~~~~ii~ls~~~~~~~~~~~~~ 98 (154)
T 2qsj_A 66 IDGLVRLKRF-DPSNAVALISGETDHELIRAALE 98 (154)
T ss_dssp HHHHHHHHHH-CTTSEEEEC-----CHHHHHHHH
T ss_pred HHHHHHHHHh-CCCCeEEEEeCCCCHHHHHHHHH
Confidence 3567788877 46777888877765555444443
No 330
>1yxo_A 4-hydroxythreonine-4-phosphate dehydrogenase 1; PA0593,pyridoxine biosynthesis,oxidoreductase, structural GE PSI; 2.01A {Pseudomonas aeruginosa}
Probab=20.44 E-value=41 Score=28.84 Aligned_cols=39 Identities=18% Similarity=0.210 Sum_probs=29.5
Q ss_pred cccChhhHHHHHHHHhCCCceEEEecCCHHHHHHHHHcCCc
Q psy11337 93 TKIGKDSCFERIVTRFGRKCTYVVIGDGQDEEAAAKQRNFP 133 (155)
Q Consensus 93 ~k~GKescFerI~~RFG~k~~yvvIGDG~eEe~aAk~~~~P 133 (155)
..||=|-|++-..+. ..|++|||||..-=++++++++.+
T Consensus 13 aGIGpEii~ka~~~~--~~~~~vv~Gd~~~l~~~~~~l~~~ 51 (328)
T 1yxo_A 13 AGIGPDLCLLLARSA--QPHPLIAIASRTLLQERAGQLGLA 51 (328)
T ss_dssp TSSHHHHHHHHTTSC--CSSCEEEEECHHHHHHHHHHHTCC
T ss_pred cchhHHHHHHHhccc--CCCCEEEEECHHHHHHHHHHcCCC
Confidence 346777777665433 268999999998888899999865
No 331
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1
Probab=20.44 E-value=1.5e+02 Score=23.44 Aligned_cols=50 Identities=18% Similarity=0.205 Sum_probs=36.5
Q ss_pred hhhHHHHHHHHh--CCCceEEEecC------CHHHHHHHHHcCCceeEecccccHHHH
Q psy11337 97 KDSCFERIVTRF--GRKCTYVVIGD------GQDEEAAAKQRNFPFWRISSRSDLAAL 146 (155)
Q Consensus 97 KescFerI~~RF--G~k~~yvvIGD------G~eEe~aAk~~~~PFwrI~~~~Dl~~L 146 (155)
-++.-+.|.++- |+++.+++-|| |.++-+++++.++||--|--=+.+.+.
T Consensus 78 ~~~i~~~l~~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~veviPGiSs~~aa 135 (280)
T 1s4d_A 78 QRDISLRLVELARAGNRVLRLKGGDPFVFGRGGEEALTLVEHQVPFRIVPGITAGIGG 135 (280)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEESBCTTSSSSHHHHHHHHHTTTCCEEEECCCCTTTHH
T ss_pred HHHHHHHHHHHHhCCCeEEEEcCCCCccccCHHHHHHHHHHCCCCEEEEcCccHHHHH
Confidence 356677787754 99999999988 567778888889888776554444333
No 332
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=20.28 E-value=79 Score=25.81 Aligned_cols=52 Identities=10% Similarity=0.165 Sum_probs=31.3
Q ss_pred hHHHHHHHHhCCCceEEEecC--CH---------------HH-HHHHHHcCCc----eeEecccccHHHHHHHh
Q psy11337 99 SCFERIVTRFGRKCTYVVIGD--GQ---------------DE-EAAAKQRNFP----FWRISSRSDLAALYHAL 150 (155)
Q Consensus 99 scFerI~~RFG~k~~yvvIGD--G~---------------eE-e~aAk~~~~P----FwrI~~~~Dl~~L~~al 150 (155)
..|.++.+++...+.++++|+ |. ++ ++-+++++.+ |.---++.|+..++.+.
T Consensus 282 ~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a 355 (499)
T 2r60_A 282 EAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYL 355 (499)
T ss_dssp HHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhc
Confidence 345555555544568999999 43 11 2345666654 33333467888888877
No 333
>3kkq_A RAS-related protein M-RAS; GTP-binding, GTPase, signaling protein; HET: GDP; 1.20A {Mus musculus} SCOP: c.37.1.8 PDB: 3kkp_A* 3kko_A* 3pit_A* 3pir_A* 1x1r_A* 1x1s_A*
Probab=20.23 E-value=2.1e+02 Score=19.42 Aligned_cols=50 Identities=16% Similarity=0.346 Sum_probs=33.0
Q ss_pred HHHHHHHh-CCCceEEEecCCHH-----------HHHHHHHcCCceeEeccc-c--cHHHHHHHh
Q psy11337 101 FERIVTRF-GRKCTYVVIGDGQD-----------EEAAAKQRNFPFWRISSR-S--DLAALYHAL 150 (155)
Q Consensus 101 FerI~~RF-G~k~~yvvIGDG~e-----------Ee~aAk~~~~PFwrI~~~-~--Dl~~L~~al 150 (155)
++.|.+.. .+++..++||.-.| -++.|+.+++||..+|+. . .+..+...+
T Consensus 112 ~~~~~~~~~~~~~p~ilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~~~~~Sa~~~~~~v~~l~~~l 176 (183)
T 3kkq_A 112 HQLILRVKDRESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDL 176 (183)
T ss_dssp HHHHHHHHTSSCCCEEEEEECTTCSTTCCSCHHHHHHHHHHHTCCEEEEBCSSSCBSHHHHHHHH
T ss_pred HHHHHHhcCCCCCcEEEEEECCCchhccCcCHHHHHHHHHHhCCeEEEeccCCCCCCHHHHHHHH
Confidence 34444434 46677888876544 234678899999999987 3 466666554
No 334
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=20.18 E-value=1.2e+02 Score=20.42 Aligned_cols=37 Identities=11% Similarity=0.099 Sum_probs=23.5
Q ss_pred HHHHHHHhC-CCceEEEecC---------CHHHHH-H-HHHcCCceeEe
Q psy11337 101 FERIVTRFG-RKCTYVVIGD---------GQDEEA-A-AKQRNFPFWRI 137 (155)
Q Consensus 101 FerI~~RFG-~k~~yvvIGD---------G~eEe~-a-Ak~~~~PFwrI 137 (155)
++++.++|+ +++.++.|.- ..++-. . +++++++|--+
T Consensus 53 l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (169)
T 2v1m_A 53 LQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMF 101 (169)
T ss_dssp HHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEB
T ss_pred HHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceE
Confidence 788899995 4599998862 222222 2 47777766443
No 335
>2fu5_C RAS-related protein RAB-8A; MSS4:RAB8 protein complex, GEF:GTPase nucleotide free complex; 2.00A {Mus musculus} SCOP: c.37.1.8 PDB: 3qbt_A* 3tnf_A*
Probab=20.14 E-value=2.1e+02 Score=19.41 Aligned_cols=49 Identities=16% Similarity=0.294 Sum_probs=30.0
Q ss_pred HHHHHHhCCCceEEEecCCHH-----------HHHHHHHcCCceeEecccc--cHHHHHHHh
Q psy11337 102 ERIVTRFGRKCTYVVIGDGQD-----------EEAAAKQRNFPFWRISSRS--DLAALYHAL 150 (155)
Q Consensus 102 erI~~RFG~k~~yvvIGDG~e-----------Ee~aAk~~~~PFwrI~~~~--Dl~~L~~al 150 (155)
+.|.+...+++..++||.-.| -++-|+++++||..+|+.. .+..+...+
T Consensus 104 ~~i~~~~~~~~piilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~~~~~Sa~~~~~i~~l~~~l 165 (183)
T 2fu5_C 104 RNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTL 165 (183)
T ss_dssp HHHHHHSCTTCEEEEEEEC--CCSCCCSCHHHHHHHHHHHTCEEEECCC---CCHHHHHHHH
T ss_pred HHHHHhcCCCCCEEEEEECccCCccCcCCHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 344444467888888884433 1345778899999999854 355555443
No 336
>2g6b_A RAS-related protein RAB-26; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, unknown function; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=20.10 E-value=2.1e+02 Score=19.27 Aligned_cols=50 Identities=20% Similarity=0.396 Sum_probs=32.0
Q ss_pred HHHHHHHhCCCceEEEecCCHH-----------HHHHHHHcCCceeEecccc--cHHHHHHHh
Q psy11337 101 FERIVTRFGRKCTYVVIGDGQD-----------EEAAAKQRNFPFWRISSRS--DLAALYHAL 150 (155)
Q Consensus 101 FerI~~RFG~k~~yvvIGDG~e-----------Ee~aAk~~~~PFwrI~~~~--Dl~~L~~al 150 (155)
++.|.+...+++..++||.-.| -++-++..++||..+|+.. .+..+...+
T Consensus 106 ~~~i~~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~gi~~l~~~l 168 (180)
T 2g6b_A 106 LTEIHEYAQHDVALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAI 168 (180)
T ss_dssp HHHHHHHSCTTCEEEEEEECCSTTSCCCSCHHHHHHHHHHHTCCEEECCTTTCTTHHHHHHHH
T ss_pred HHHHHHhCCCCCcEEEEEECcccCcccccCHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 3445554457788888874333 1345778899999999854 355555544
No 337
>2hl7_A Cytochrome C-type biogenesis protein CCMH; three-helices bundle, oxidoreductase; HET: PG4; 1.70A {Pseudomonas aeruginosa}
Probab=20.07 E-value=72 Score=22.32 Aligned_cols=18 Identities=22% Similarity=0.512 Sum_probs=16.6
Q ss_pred hhhHHHHHHHHhCCCceE
Q psy11337 97 KDSCFERIVTRFGRKCTY 114 (155)
Q Consensus 97 KescFerI~~RFG~k~~y 114 (155)
+++..+.+++|||..+.|
T Consensus 62 d~eI~~~~v~RYG~fVly 79 (84)
T 2hl7_A 62 DGEIVDYMVARYGDFVRY 79 (84)
T ss_dssp HHHHHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHHhcCCeeee
Confidence 789999999999998877
No 338
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=20.04 E-value=1.1e+02 Score=21.55 Aligned_cols=35 Identities=17% Similarity=0.300 Sum_probs=22.4
Q ss_pred HHHHHHHhCC-CceEEEec---------CCHHH-HHHHHH-cCCcee
Q psy11337 101 FERIVTRFGR-KCTYVVIG---------DGQDE-EAAAKQ-RNFPFW 135 (155)
Q Consensus 101 FerI~~RFG~-k~~yvvIG---------DG~eE-e~aAk~-~~~PFw 135 (155)
++++.++|+. .+.++.|. |..++ .+.+++ .+++|-
T Consensus 60 l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~ 106 (180)
T 3kij_A 60 LKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFP 106 (180)
T ss_dssp HHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSC
T ss_pred HHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCc
Confidence 7789999964 58888885 33333 234555 666653
No 339
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=20.01 E-value=1.1e+02 Score=20.02 Aligned_cols=17 Identities=18% Similarity=0.335 Sum_probs=9.8
Q ss_pred HHHHHHHhCCCceEEEe
Q psy11337 101 FERIVTRFGRKCTYVVI 117 (155)
Q Consensus 101 FerI~~RFG~k~~yvvI 117 (155)
|+++.++|+.++.|+.|
T Consensus 53 l~~~~~~~~~~v~~~~v 69 (119)
T 1w4v_A 53 LEKMVAKQHGKVVMAKV 69 (119)
T ss_dssp HHHHHHHTTTSSEEEEE
T ss_pred HHHHHHHhcCCeEEEEE
Confidence 45555566555666555
No 340
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=20.00 E-value=1.3e+02 Score=19.71 Aligned_cols=33 Identities=9% Similarity=0.102 Sum_probs=20.4
Q ss_pred hhHHHHHHHHh-CCCceEEEecCCHHHHHHHHHc
Q psy11337 98 DSCFERIVTRF-GRKCTYVVIGDGQDEEAAAKQR 130 (155)
Q Consensus 98 escFerI~~RF-G~k~~yvvIGDG~eEe~aAk~~ 130 (155)
....++|++.. .+++..+++++..+++.+.+.+
T Consensus 67 ~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~ 100 (144)
T 3kht_A 67 FEVMSAVRKPGANQHTPIVILTDNVSDDRAKQCM 100 (144)
T ss_dssp HHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHH
T ss_pred HHHHHHHHhcccccCCCEEEEeCCCCHHHHHHHH
Confidence 45667777643 5677788887665555544433
Done!