Query psy1134
Match_columns 149
No_of_seqs 107 out of 1256
Neff 8.9
Searched_HMMs 29240
Date Fri Aug 16 15:52:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1134.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1134hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fut_A Dimethyladenosine trans 99.7 5.9E-16 2E-20 116.1 10.2 86 12-98 9-94 (271)
2 3gru_A Dimethyladenosine trans 99.6 3.2E-15 1.1E-19 113.4 8.1 80 13-92 13-92 (295)
3 3tqs_A Ribosomal RNA small sub 99.6 4.4E-15 1.5E-19 110.5 7.7 71 23-93 2-72 (255)
4 3uzu_A Ribosomal RNA small sub 99.6 9.9E-15 3.4E-19 109.9 8.0 73 20-92 12-88 (279)
5 3ftd_A Dimethyladenosine trans 99.5 1.4E-14 4.7E-19 107.4 8.6 76 22-98 3-79 (249)
6 3iv6_A Putative Zn-dependent a 99.5 1.1E-14 3.8E-19 108.6 7.0 85 36-121 31-125 (261)
7 1qam_A ERMC' methyltransferase 99.5 2.5E-14 8.5E-19 105.6 7.8 71 23-93 3-73 (244)
8 3ofk_A Nodulation protein S; N 99.5 5.3E-14 1.8E-18 101.0 7.0 86 36-122 37-130 (216)
9 2h1r_A Dimethyladenosine trans 99.5 6.6E-14 2.3E-18 106.2 7.5 75 18-92 10-84 (299)
10 3hem_A Cyclopropane-fatty-acyl 99.5 6.3E-14 2.1E-18 105.8 7.3 108 37-145 59-177 (302)
11 1zq9_A Probable dimethyladenos 99.5 9.7E-14 3.3E-18 104.6 8.2 69 25-93 3-71 (285)
12 1pjz_A Thiopurine S-methyltran 99.5 8.7E-14 3E-18 99.7 6.4 53 40-92 12-64 (203)
13 4hg2_A Methyltransferase type 99.5 9.9E-14 3.4E-18 103.2 6.8 82 36-120 27-113 (257)
14 2gb4_A Thiopurine S-methyltran 99.4 3E-13 1E-17 100.3 8.9 57 36-92 54-110 (252)
15 3ege_A Putative methyltransfer 99.4 4.1E-13 1.4E-17 99.4 9.4 88 34-122 18-110 (261)
16 3g5l_A Putative S-adenosylmeth 99.4 2.4E-13 8.1E-18 99.9 7.8 83 38-121 32-123 (253)
17 3thr_A Glycine N-methyltransfe 99.4 1.2E-13 4E-18 103.5 5.5 88 34-121 41-146 (293)
18 1yub_A Ermam, rRNA methyltrans 99.4 3.8E-14 1.3E-18 104.4 2.6 71 23-93 2-72 (245)
19 4azs_A Methyltransferase WBDD; 99.4 1.7E-13 5.7E-18 112.1 6.6 89 50-145 66-167 (569)
20 4gek_A TRNA (CMO5U34)-methyltr 99.4 2.4E-13 8.3E-18 101.3 6.8 73 49-122 69-155 (261)
21 3e23_A Uncharacterized protein 99.4 3.1E-13 1.1E-17 96.7 6.9 80 38-120 33-116 (211)
22 3ujc_A Phosphoethanolamine N-m 99.4 3.1E-13 1.1E-17 99.4 6.9 96 24-120 27-134 (266)
23 3bus_A REBM, methyltransferase 99.4 3.3E-13 1.1E-17 100.0 7.0 86 36-122 47-145 (273)
24 2p7i_A Hypothetical protein; p 99.4 1.7E-13 5.7E-18 99.7 5.1 82 40-122 31-119 (250)
25 3hnr_A Probable methyltransfer 99.4 4.5E-13 1.5E-17 96.3 7.2 84 40-124 35-124 (220)
26 3pfg_A N-methyltransferase; N, 99.4 3.1E-13 1.1E-17 99.8 6.5 73 50-122 50-127 (263)
27 3bkw_A MLL3908 protein, S-aden 99.4 8.7E-13 3E-17 95.9 8.7 107 11-121 7-122 (243)
28 1kpg_A CFA synthase;, cyclopro 99.4 7.1E-13 2.4E-17 99.1 8.3 83 38-121 52-144 (287)
29 3dli_A Methyltransferase; PSI- 99.4 4.5E-13 1.5E-17 97.8 6.9 86 36-122 26-117 (240)
30 3g2m_A PCZA361.24; SAM-depende 99.4 5.7E-13 1.9E-17 100.4 7.6 84 36-120 69-165 (299)
31 2fk8_A Methoxy mycolic acid sy 99.4 7.9E-13 2.7E-17 100.3 8.2 84 37-121 77-170 (318)
32 3dtn_A Putative methyltransfer 99.4 2.3E-13 7.9E-18 98.7 4.7 87 36-123 29-126 (234)
33 3jwh_A HEN1; methyltransferase 99.4 4.8E-13 1.6E-17 96.2 6.2 86 36-122 15-118 (217)
34 3ccf_A Cyclopropane-fatty-acyl 99.4 2E-13 6.8E-18 101.9 4.4 85 37-122 44-133 (279)
35 3jwg_A HEN1, methyltransferase 99.4 5.7E-13 1.9E-17 95.8 6.6 86 36-122 15-118 (219)
36 1vl5_A Unknown conserved prote 99.4 8.6E-13 3E-17 97.3 7.7 83 39-122 26-119 (260)
37 1nkv_A Hypothetical protein YJ 99.4 9.6E-13 3.3E-17 96.6 7.6 85 36-121 22-118 (256)
38 3ou2_A SAM-dependent methyltra 99.4 3.4E-13 1.2E-17 96.5 4.7 82 39-122 34-123 (218)
39 3h2b_A SAM-dependent methyltra 99.4 3.7E-13 1.3E-17 95.7 4.8 69 51-120 42-116 (203)
40 3l8d_A Methyltransferase; stru 99.4 1.2E-12 4E-17 95.2 7.3 84 36-122 41-132 (242)
41 3gu3_A Methyltransferase; alph 99.4 1.5E-12 5.2E-17 97.5 8.0 89 33-122 4-105 (284)
42 2p35_A Trans-aconitate 2-methy 99.4 1.1E-12 3.9E-17 96.2 6.8 85 36-121 19-110 (259)
43 3f4k_A Putative methyltransfer 99.4 2.8E-12 9.6E-17 94.1 8.7 83 36-119 31-127 (257)
44 3ggd_A SAM-dependent methyltra 99.3 6.5E-12 2.2E-16 91.7 10.4 71 49-120 55-138 (245)
45 3kkz_A Uncharacterized protein 99.3 3.2E-12 1.1E-16 94.6 8.9 84 35-119 30-127 (267)
46 4htf_A S-adenosylmethionine-de 99.3 2.8E-12 9.4E-17 95.8 8.1 81 40-122 59-152 (285)
47 3dlc_A Putative S-adenosyl-L-m 99.3 1.1E-12 3.7E-17 93.7 5.6 84 36-121 30-126 (219)
48 3bkx_A SAM-dependent methyltra 99.3 2.4E-12 8.1E-17 95.5 7.6 100 36-145 29-152 (275)
49 3hm2_A Precorrin-6Y C5,15-meth 99.3 2.4E-12 8.4E-17 89.3 6.9 59 35-93 10-70 (178)
50 3bxo_A N,N-dimethyltransferase 99.3 1.1E-12 3.6E-17 95.2 5.1 82 39-122 31-117 (239)
51 3e8s_A Putative SAM dependent 99.3 8.9E-13 3E-17 94.6 4.5 79 38-117 40-127 (227)
52 3lbf_A Protein-L-isoaspartate 99.3 4.4E-12 1.5E-16 90.6 7.9 88 33-121 60-158 (210)
53 2xvm_A Tellurite resistance pr 99.3 4.5E-12 1.5E-16 89.4 7.6 79 41-120 23-111 (199)
54 1y8c_A S-adenosylmethionine-de 99.3 3.4E-12 1.2E-16 92.7 7.2 86 36-121 21-117 (246)
55 1wzn_A SAM-dependent methyltra 99.3 3.6E-12 1.2E-16 93.4 7.3 82 37-118 28-118 (252)
56 1qyr_A KSGA, high level kasuga 99.3 3.1E-12 1.1E-16 94.9 6.9 62 30-93 1-64 (252)
57 3vc1_A Geranyl diphosphate 2-C 99.3 3.4E-12 1.2E-16 96.8 7.0 79 40-119 106-198 (312)
58 2o57_A Putative sarcosine dime 99.3 4E-12 1.4E-16 95.4 7.2 85 36-121 64-165 (297)
59 3mti_A RRNA methylase; SAM-dep 99.3 2.7E-12 9.3E-17 90.0 5.8 55 38-93 11-65 (185)
60 4e2x_A TCAB9; kijanose, tetron 99.3 4.1E-12 1.4E-16 99.8 7.3 100 36-145 93-201 (416)
61 2yqz_A Hypothetical protein TT 99.3 5E-12 1.7E-16 92.9 7.3 85 36-121 20-119 (263)
62 1xxl_A YCGJ protein; structura 99.3 6.3E-12 2.2E-16 91.8 7.7 85 36-121 7-102 (239)
63 3m70_A Tellurite resistance pr 99.3 2.9E-12 1E-16 95.7 5.9 78 43-121 113-199 (286)
64 3sm3_A SAM-dependent methyltra 99.3 1.9E-12 6.4E-17 93.5 3.8 79 42-123 24-118 (235)
65 3d2l_A SAM-dependent methyltra 99.3 1.3E-11 4.6E-16 89.6 8.1 83 36-121 21-112 (243)
66 3dh0_A SAM dependent methyltra 99.3 5.1E-12 1.7E-16 90.6 5.7 81 40-121 27-121 (219)
67 3fzg_A 16S rRNA methylase; met 99.3 3.4E-12 1.2E-16 90.9 4.4 99 36-145 37-146 (200)
68 1xtp_A LMAJ004091AAA; SGPP, st 99.3 1.2E-11 4E-16 90.6 7.4 85 36-121 79-173 (254)
69 1vbf_A 231AA long hypothetical 99.3 2E-11 6.7E-16 88.4 8.4 90 29-120 50-148 (231)
70 2avn_A Ubiquinone/menaquinone 99.3 1.4E-11 4.7E-16 91.0 7.7 72 39-112 45-121 (260)
71 3i9f_A Putative type 11 methyl 99.3 2E-12 6.7E-17 89.5 2.7 79 42-121 9-90 (170)
72 1wy7_A Hypothetical protein PH 99.2 1.8E-11 6E-16 87.3 7.6 85 26-111 23-118 (207)
73 3g5t_A Trans-aconitate 3-methy 99.2 2E-11 6.8E-16 91.9 8.2 82 36-119 23-126 (299)
74 3lcc_A Putative methyl chlorid 99.2 7.7E-12 2.6E-16 90.9 5.4 79 40-120 57-146 (235)
75 3njr_A Precorrin-6Y methylase; 99.2 3.1E-11 1E-15 86.5 8.4 60 33-92 38-97 (204)
76 3m33_A Uncharacterized protein 99.2 2.6E-11 8.8E-16 87.9 8.1 75 37-112 36-118 (226)
77 3orh_A Guanidinoacetate N-meth 99.2 9.3E-12 3.2E-16 91.2 5.7 58 36-94 47-105 (236)
78 2vdw_A Vaccinia virus capping 99.2 7E-12 2.4E-16 95.2 5.1 89 50-145 48-162 (302)
79 2gs9_A Hypothetical protein TT 99.2 1.5E-11 5E-16 87.8 5.8 77 40-121 27-110 (211)
80 2a14_A Indolethylamine N-methy 99.2 5.3E-12 1.8E-16 93.7 3.5 46 47-92 52-98 (263)
81 3mgg_A Methyltransferase; NYSG 99.2 1.5E-11 5.2E-16 91.2 5.8 84 38-122 25-121 (276)
82 2aot_A HMT, histamine N-methyl 99.2 3.1E-11 1E-15 90.7 7.2 74 49-123 51-152 (292)
83 3cc8_A Putative methyltransfer 99.2 2.7E-11 9.4E-16 86.9 6.7 81 40-122 23-109 (230)
84 2pxx_A Uncharacterized protein 99.2 1.5E-10 5.2E-15 82.3 10.2 78 37-117 31-118 (215)
85 3htx_A HEN1; HEN1, small RNA m 99.2 1.6E-11 5.4E-16 103.4 5.8 87 36-123 707-813 (950)
86 3e05_A Precorrin-6Y C5,15-meth 99.2 6.8E-11 2.3E-15 84.1 8.1 60 34-93 24-85 (204)
87 3q87_B N6 adenine specific DNA 99.2 1.2E-11 4E-16 86.2 3.8 62 49-112 22-85 (170)
88 2p8j_A S-adenosylmethionine-de 99.2 4.4E-11 1.5E-15 85.1 6.7 71 49-120 22-103 (209)
89 1ne2_A Hypothetical protein TA 99.2 6E-11 2E-15 84.2 7.3 79 34-112 32-117 (200)
90 2ex4_A Adrenal gland protein A 99.2 2.4E-11 8.1E-16 88.7 5.2 72 50-122 79-162 (241)
91 1dl5_A Protein-L-isoaspartate 99.2 2.6E-11 8.8E-16 92.4 5.6 86 34-120 59-158 (317)
92 2g72_A Phenylethanolamine N-me 99.2 2.1E-11 7.1E-16 91.4 4.7 53 40-92 59-114 (289)
93 2yxd_A Probable cobalt-precorr 99.2 1.3E-10 4.4E-15 80.6 8.5 60 34-93 19-78 (183)
94 3g07_A 7SK snRNA methylphospha 99.2 1.5E-11 5E-16 92.7 3.6 43 50-92 46-90 (292)
95 1ve3_A Hypothetical protein PH 99.1 8.6E-11 2.9E-15 84.4 7.2 78 36-116 26-113 (227)
96 3cgg_A SAM-dependent methyltra 99.1 9.3E-11 3.2E-15 82.0 7.1 72 49-120 45-122 (195)
97 1ws6_A Methyltransferase; stru 99.1 6.8E-11 2.3E-15 81.3 6.3 60 34-93 23-84 (171)
98 3bzb_A Uncharacterized protein 99.1 7E-11 2.4E-15 88.6 6.7 56 37-92 66-123 (281)
99 3r0q_C Probable protein argini 99.1 6.6E-11 2.3E-15 92.3 6.7 75 36-111 49-135 (376)
100 1dus_A MJ0882; hypothetical pr 99.1 1.5E-10 5.2E-15 80.8 7.9 57 37-93 39-95 (194)
101 2i62_A Nicotinamide N-methyltr 99.1 3.4E-11 1.1E-15 88.5 4.6 47 47-93 53-100 (265)
102 3p9n_A Possible methyltransfer 99.1 9E-11 3.1E-15 82.6 6.4 60 34-93 25-88 (189)
103 1ri5_A MRNA capping enzyme; me 99.1 8.2E-11 2.8E-15 87.8 6.5 70 48-118 62-145 (298)
104 3hp7_A Hemolysin, putative; st 99.1 6.6E-11 2.3E-15 89.4 6.0 52 39-90 73-126 (291)
105 2esr_A Methyltransferase; stru 99.1 1.3E-10 4.4E-15 80.8 6.7 59 36-94 16-76 (177)
106 3ocj_A Putative exported prote 99.1 9.7E-11 3.3E-15 88.5 6.2 76 48-124 116-205 (305)
107 1xdz_A Methyltransferase GIDB; 99.1 2.2E-10 7.5E-15 83.7 7.6 44 49-92 69-114 (240)
108 1nv8_A HEMK protein; class I a 99.1 7.5E-11 2.6E-15 88.8 5.2 59 36-94 109-168 (284)
109 1i4w_A Mitochondrial replicati 99.1 2.6E-10 8.7E-15 88.3 8.2 79 22-100 24-110 (353)
110 3lpm_A Putative methyltransfer 99.1 9.1E-11 3.1E-15 86.7 5.5 52 42-93 40-93 (259)
111 1l3i_A Precorrin-6Y methyltran 99.1 5E-10 1.7E-14 78.0 8.8 60 33-92 16-75 (192)
112 3grz_A L11 mtase, ribosomal pr 99.1 1.6E-10 5.6E-15 82.2 6.2 63 49-111 59-131 (205)
113 2qe6_A Uncharacterized protein 99.1 3.5E-10 1.2E-14 84.6 8.2 86 36-122 62-173 (274)
114 4hc4_A Protein arginine N-meth 99.1 5.8E-11 2E-15 92.7 4.0 73 38-111 71-155 (376)
115 2fhp_A Methylase, putative; al 99.1 3E-10 1E-14 79.2 7.3 60 34-93 27-88 (187)
116 3bgv_A MRNA CAP guanine-N7 met 99.1 1.6E-10 5.4E-15 87.5 5.9 43 50-92 34-77 (313)
117 3g89_A Ribosomal RNA small sub 99.1 2.2E-10 7.7E-15 84.6 6.3 45 49-93 79-125 (249)
118 3a27_A TYW2, uncharacterized p 99.1 2.4E-10 8.4E-15 85.3 6.4 75 20-94 89-165 (272)
119 1u2z_A Histone-lysine N-methyl 99.1 4.4E-10 1.5E-14 89.2 8.1 53 36-88 228-282 (433)
120 3opn_A Putative hemolysin; str 99.1 2.8E-10 9.7E-15 83.3 6.5 54 38-91 24-79 (232)
121 2yxe_A Protein-L-isoaspartate 99.1 4.8E-10 1.7E-14 80.2 7.6 86 34-120 61-160 (215)
122 4dzr_A Protein-(glutamine-N5) 99.1 1.8E-10 6E-15 81.9 5.2 58 36-93 15-75 (215)
123 2gpy_A O-methyltransferase; st 99.0 2.6E-10 9E-15 82.7 6.1 60 34-93 38-99 (233)
124 2fpo_A Methylase YHHF; structu 99.0 1.8E-10 6.3E-15 82.2 5.0 59 35-93 38-98 (202)
125 3p2e_A 16S rRNA methylase; met 99.0 1.1E-10 3.8E-15 85.0 3.8 44 49-92 23-72 (225)
126 2nxc_A L11 mtase, ribosomal pr 99.0 4.4E-10 1.5E-14 83.1 7.0 46 49-94 119-164 (254)
127 2ift_A Putative methylase HI07 99.0 1.7E-10 5.7E-15 82.4 4.6 58 36-93 38-97 (201)
128 3gdh_A Trimethylguanosine synt 99.0 2.1E-10 7.2E-15 83.5 5.2 82 36-118 63-156 (241)
129 4fsd_A Arsenic methyltransfera 99.0 3.8E-10 1.3E-14 88.0 6.8 74 48-122 81-182 (383)
130 1af7_A Chemotaxis receptor met 99.0 1.2E-10 4E-15 87.4 3.7 61 32-92 86-157 (274)
131 1zx0_A Guanidinoacetate N-meth 99.0 5.4E-10 1.8E-14 81.3 7.1 75 36-111 47-134 (236)
132 2ih2_A Modification methylase 99.0 2.9E-10 9.8E-15 89.2 6.1 88 22-111 12-104 (421)
133 3dxy_A TRNA (guanine-N(7)-)-me 99.0 3.3E-10 1.1E-14 82.1 5.9 44 50-93 34-79 (218)
134 4dcm_A Ribosomal RNA large sub 99.0 4E-10 1.4E-14 87.9 6.7 57 38-94 210-268 (375)
135 3uwp_A Histone-lysine N-methyl 99.0 4.7E-10 1.6E-14 88.4 7.0 56 36-91 159-216 (438)
136 3lcv_B Sisomicin-gentamicin re 99.0 1.1E-10 3.9E-15 86.7 3.2 95 41-145 125-230 (281)
137 1jg1_A PIMT;, protein-L-isoasp 99.0 6.1E-10 2.1E-14 81.0 7.0 86 34-120 75-172 (235)
138 3evz_A Methyltransferase; NYSG 99.0 1.6E-09 5.6E-14 78.1 9.3 55 39-93 44-100 (230)
139 3u81_A Catechol O-methyltransf 99.0 3.7E-10 1.3E-14 81.5 5.8 60 34-93 42-104 (221)
140 1yzh_A TRNA (guanine-N(7)-)-me 99.0 9.5E-10 3.3E-14 78.8 7.9 44 49-92 40-85 (214)
141 2frn_A Hypothetical protein PH 99.0 4.6E-10 1.6E-14 84.0 6.3 55 37-93 114-169 (278)
142 3duw_A OMT, O-methyltransferas 99.0 4.6E-10 1.6E-14 80.8 6.0 59 35-93 43-104 (223)
143 2y1w_A Histone-arginine methyl 99.0 4.9E-10 1.7E-14 86.4 6.3 76 36-112 36-123 (348)
144 3mq2_A 16S rRNA methyltransfer 99.0 3.2E-10 1.1E-14 81.4 4.8 47 41-87 18-66 (218)
145 1fbn_A MJ fibrillarin homologu 99.0 5.7E-10 1.9E-14 81.0 6.1 55 38-92 59-118 (230)
146 2pbf_A Protein-L-isoaspartate 99.0 1.3E-09 4.3E-14 78.7 7.7 60 34-93 62-130 (227)
147 3dmg_A Probable ribosomal RNA 99.0 9.3E-10 3.2E-14 86.0 7.2 75 38-112 219-305 (381)
148 4df3_A Fibrillarin-like rRNA/T 99.0 7.3E-10 2.5E-14 81.2 6.2 57 37-93 61-123 (233)
149 3mb5_A SAM-dependent methyltra 99.0 1.4E-09 4.7E-14 79.8 7.7 57 36-92 79-138 (255)
150 3ntv_A MW1564 protein; rossman 99.0 5.7E-10 1.9E-14 81.2 5.6 59 35-93 56-116 (232)
151 1nt2_A Fibrillarin-like PRE-rR 99.0 6.8E-10 2.3E-14 79.9 5.8 43 46-88 53-97 (210)
152 3tr6_A O-methyltransferase; ce 99.0 7.5E-10 2.6E-14 79.7 6.0 59 35-93 49-110 (225)
153 3adn_A Spermidine synthase; am 99.0 7.3E-10 2.5E-14 83.8 6.1 43 50-92 83-127 (294)
154 1uwv_A 23S rRNA (uracil-5-)-me 99.0 1.2E-09 4E-14 86.7 7.5 58 36-93 272-329 (433)
155 2pjd_A Ribosomal RNA small sub 99.0 3.3E-10 1.1E-14 87.2 4.0 76 37-112 183-268 (343)
156 1o9g_A RRNA methyltransferase; 99.0 6.9E-10 2.4E-14 81.4 5.5 57 37-93 38-98 (250)
157 3frh_A 16S rRNA methylase; met 99.0 3.2E-10 1.1E-14 83.4 3.6 88 49-145 104-200 (253)
158 3fpf_A Mtnas, putative unchara 99.0 1.8E-09 6.2E-14 81.7 7.8 75 38-112 110-195 (298)
159 3tfw_A Putative O-methyltransf 99.0 9.7E-10 3.3E-14 80.8 6.0 58 36-93 49-109 (248)
160 1i1n_A Protein-L-isoaspartate 99.0 2E-09 6.8E-14 77.6 7.6 60 34-93 59-123 (226)
161 2fyt_A Protein arginine N-meth 99.0 1.2E-09 4E-14 84.1 6.7 57 36-93 50-107 (340)
162 1sui_A Caffeoyl-COA O-methyltr 99.0 1.6E-09 5.6E-14 79.8 7.2 59 35-93 64-125 (247)
163 2h00_A Methyltransferase 10 do 98.9 1.2E-09 4.1E-14 80.2 6.3 44 50-93 65-110 (254)
164 2avd_A Catechol-O-methyltransf 98.9 1.5E-09 5.1E-14 78.3 6.7 61 33-93 52-115 (229)
165 3dr5_A Putative O-methyltransf 98.9 1.7E-09 5.7E-14 78.5 6.8 57 38-94 44-103 (221)
166 2fca_A TRNA (guanine-N(7)-)-me 98.9 1E-09 3.6E-14 78.9 5.5 44 50-93 38-83 (213)
167 3kr9_A SAM-dependent methyltra 98.9 1.1E-09 3.7E-14 79.9 5.5 53 40-94 7-61 (225)
168 2hnk_A SAM-dependent O-methylt 98.9 1.4E-09 4.7E-14 79.3 6.0 59 34-92 44-105 (239)
169 4dmg_A Putative uncharacterize 98.9 1.8E-09 6E-14 84.8 6.9 60 34-94 199-258 (393)
170 3r3h_A O-methyltransferase, SA 98.9 7.2E-10 2.5E-14 81.4 4.5 60 34-93 44-106 (242)
171 2igt_A SAM dependent methyltra 98.9 1.8E-09 6.1E-14 83.0 6.8 59 36-94 138-197 (332)
172 1r18_A Protein-L-isoaspartate( 98.9 2.2E-09 7.4E-14 77.6 6.9 59 34-92 66-134 (227)
173 1vlm_A SAM-dependent methyltra 98.9 7.3E-10 2.5E-14 79.7 4.3 67 51-122 48-118 (219)
174 1qzz_A RDMB, aclacinomycin-10- 98.9 1.7E-09 5.9E-14 83.5 6.6 81 40-122 172-264 (374)
175 3gnl_A Uncharacterized protein 98.9 1.3E-09 4.4E-14 80.4 5.4 54 39-94 12-67 (244)
176 3eey_A Putative rRNA methylase 98.9 1.6E-09 5.4E-14 76.4 5.7 47 47-93 19-68 (197)
177 2pwy_A TRNA (adenine-N(1)-)-me 98.9 3.9E-09 1.3E-13 77.2 7.8 57 36-92 82-141 (258)
178 1jsx_A Glucose-inhibited divis 98.9 1.3E-09 4.4E-14 77.4 5.0 56 38-93 50-110 (207)
179 2kw5_A SLR1183 protein; struct 98.9 1.7E-09 6E-14 76.4 5.6 52 38-92 20-71 (202)
180 2bm8_A Cephalosporin hydroxyla 98.9 7.1E-10 2.4E-14 81.2 3.6 55 36-90 67-127 (236)
181 3b3j_A Histone-arginine methyl 98.9 1.5E-09 5.2E-14 87.2 5.8 74 38-112 146-231 (480)
182 2r3s_A Uncharacterized protein 98.9 1.6E-09 5.4E-14 82.4 5.6 82 39-122 152-248 (335)
183 1m6y_A S-adenosyl-methyltransf 98.9 1.9E-09 6.4E-14 81.8 5.9 58 36-93 12-71 (301)
184 1i9g_A Hypothetical protein RV 98.9 4.1E-09 1.4E-13 78.3 7.7 57 36-92 85-144 (280)
185 3bwc_A Spermidine synthase; SA 98.9 4.5E-09 1.5E-13 79.7 8.1 44 49-92 94-139 (304)
186 3tm4_A TRNA (guanine N2-)-meth 98.9 2.4E-09 8.4E-14 83.3 6.7 59 35-94 203-263 (373)
187 3lec_A NADB-rossmann superfami 98.9 1.7E-09 6E-14 79.0 5.5 55 38-94 11-67 (230)
188 3tma_A Methyltransferase; thum 98.9 3.6E-09 1.2E-13 81.5 7.4 61 34-94 187-250 (354)
189 3c3y_A Pfomt, O-methyltransfer 98.9 3.7E-09 1.3E-13 77.3 7.1 59 35-93 55-116 (237)
190 3ckk_A TRNA (guanine-N(7)-)-me 98.9 1.7E-09 5.9E-14 79.1 5.3 44 49-92 45-90 (235)
191 2jjq_A Uncharacterized RNA met 98.9 2.4E-09 8.4E-14 84.8 6.4 73 22-94 261-334 (425)
192 2o07_A Spermidine synthase; st 98.9 3.9E-09 1.3E-13 80.1 7.3 45 49-93 94-140 (304)
193 2b3t_A Protein methyltransfera 98.9 4.4E-09 1.5E-13 78.3 7.5 76 36-112 96-183 (276)
194 3gwz_A MMCR; methyltransferase 98.9 4.9E-09 1.7E-13 81.3 8.0 82 39-122 191-284 (369)
195 2yvl_A TRMI protein, hypotheti 98.9 5.2E-09 1.8E-13 76.2 7.7 57 36-92 77-133 (248)
196 2ip2_A Probable phenazine-spec 98.9 4.4E-09 1.5E-13 80.1 7.3 82 38-122 156-249 (334)
197 1mjf_A Spermidine synthase; sp 98.9 4E-09 1.4E-13 79.1 6.9 44 49-92 74-118 (281)
198 3mcz_A O-methyltransferase; ad 98.9 2.7E-09 9.4E-14 81.8 6.1 80 41-122 169-264 (352)
199 2ozv_A Hypothetical protein AT 98.9 2.2E-09 7.6E-14 79.5 5.4 53 42-94 28-82 (260)
200 2b78_A Hypothetical protein SM 98.9 3.8E-09 1.3E-13 82.6 7.0 75 20-95 179-258 (385)
201 1yb2_A Hypothetical protein TA 98.9 2.9E-09 9.9E-14 79.3 6.0 54 40-93 100-156 (275)
202 1tw3_A COMT, carminomycin 4-O- 98.9 3.4E-09 1.2E-13 81.5 6.6 81 40-122 173-265 (360)
203 1iy9_A Spermidine synthase; ro 98.9 3.8E-09 1.3E-13 79.1 6.6 43 50-92 75-119 (275)
204 3k6r_A Putative transferase PH 98.9 2E-09 6.8E-14 80.9 4.9 75 19-95 94-171 (278)
205 1g8a_A Fibrillarin-like PRE-rR 98.9 3.5E-09 1.2E-13 76.4 6.0 57 36-92 56-118 (227)
206 3c3p_A Methyltransferase; NP_9 98.9 2.7E-09 9.2E-14 76.2 5.4 45 49-93 55-102 (210)
207 1x19_A CRTF-related protein; m 98.9 5.5E-09 1.9E-13 80.5 7.4 82 38-121 178-271 (359)
208 2i7c_A Spermidine synthase; tr 98.9 7.8E-09 2.7E-13 77.6 7.9 46 48-93 76-123 (283)
209 3bt7_A TRNA (uracil-5-)-methyl 98.8 6.3E-09 2.2E-13 80.8 7.6 58 36-94 200-257 (369)
210 2wa2_A Non-structural protein 98.8 1.4E-09 4.9E-14 81.5 3.8 47 40-88 72-118 (276)
211 2okc_A Type I restriction enzy 98.8 5.6E-09 1.9E-13 83.0 7.4 71 23-94 145-230 (445)
212 3dp7_A SAM-dependent methyltra 98.8 2.9E-09 1E-13 82.4 5.6 72 49-122 178-264 (363)
213 2b25_A Hypothetical protein; s 98.8 5.1E-09 1.7E-13 80.1 6.8 58 36-93 91-151 (336)
214 3i53_A O-methyltransferase; CO 98.8 2E-09 6.9E-14 82.1 4.4 75 46-122 165-251 (332)
215 1g6q_1 HnRNP arginine N-methyl 98.8 3E-09 1E-13 81.4 5.4 56 37-93 25-81 (328)
216 3cbg_A O-methyltransferase; cy 98.8 5.9E-09 2E-13 75.8 6.7 58 35-92 57-117 (232)
217 1xj5_A Spermidine synthase 1; 98.8 7.4E-09 2.5E-13 79.6 7.5 44 49-92 119-164 (334)
218 3q7e_A Protein arginine N-meth 98.8 2.3E-09 7.8E-14 82.7 4.6 74 38-112 54-140 (349)
219 2vdv_E TRNA (guanine-N(7)-)-me 98.8 3.3E-09 1.1E-13 77.7 5.3 43 50-92 49-93 (246)
220 1o54_A SAM-dependent O-methylt 98.8 9.2E-09 3.1E-13 76.5 7.7 58 36-93 98-158 (277)
221 2pt6_A Spermidine synthase; tr 98.8 6.5E-09 2.2E-13 79.4 6.6 45 49-93 115-161 (321)
222 3id6_C Fibrillarin-like rRNA/T 98.8 7.2E-09 2.5E-13 75.9 6.6 52 36-87 59-116 (232)
223 1inl_A Spermidine synthase; be 98.8 6.6E-09 2.3E-13 78.5 6.5 43 50-92 90-134 (296)
224 2r6z_A UPF0341 protein in RSP 98.8 4E-09 1.4E-13 78.3 4.9 50 43-92 76-132 (258)
225 1uir_A Polyamine aminopropyltr 98.8 7.6E-09 2.6E-13 78.8 6.5 45 49-93 76-122 (314)
226 2oxt_A Nucleoside-2'-O-methylt 98.8 3.1E-09 1E-13 79.3 4.0 47 39-87 63-109 (265)
227 2yx1_A Hypothetical protein MJ 98.8 4.8E-09 1.7E-13 80.5 5.0 51 41-94 188-238 (336)
228 1p91_A Ribosomal RNA large sub 98.8 1.8E-08 6.2E-13 74.3 7.9 64 49-112 84-155 (269)
229 2b2c_A Spermidine synthase; be 98.8 1.1E-08 3.8E-13 78.0 6.8 44 50-93 108-153 (314)
230 2ipx_A RRNA 2'-O-methyltransfe 98.8 1.5E-08 5.2E-13 73.4 6.7 47 45-91 72-121 (233)
231 3c0k_A UPF0064 protein YCCW; P 98.8 1.9E-08 6.4E-13 78.8 7.7 54 40-95 212-266 (396)
232 2zig_A TTHA0409, putative modi 98.7 1.9E-08 6.5E-13 75.9 7.2 58 35-93 221-278 (297)
233 3ldu_A Putative methylase; str 98.7 1.1E-08 3.6E-13 80.1 5.9 60 35-94 180-279 (385)
234 3gjy_A Spermidine synthase; AP 98.7 1.1E-08 3.9E-13 78.0 5.8 88 52-145 91-193 (317)
235 1fp1_D Isoliquiritigenin 2'-O- 98.7 1.9E-08 6.5E-13 77.9 6.8 81 40-123 198-284 (372)
236 2as0_A Hypothetical protein PH 98.7 2.3E-08 8E-13 78.2 7.2 62 32-94 200-262 (396)
237 1ej0_A FTSJ; methyltransferase 98.7 1E-08 3.4E-13 70.2 4.6 45 42-87 13-61 (180)
238 3k0b_A Predicted N6-adenine-sp 98.7 1.6E-08 5.6E-13 79.3 6.3 60 35-94 186-285 (393)
239 2f8l_A Hypothetical protein LM 98.7 2.1E-08 7.1E-13 77.0 6.8 67 26-93 103-180 (344)
240 1fp2_A Isoflavone O-methyltran 98.7 1.9E-08 6.4E-13 77.4 6.1 72 48-122 186-262 (352)
241 2yxl_A PH0851 protein, 450AA l 98.7 2.8E-08 9.5E-13 79.1 7.0 57 37-93 246-305 (450)
242 1wxx_A TT1595, hypothetical pr 98.7 1.1E-08 3.9E-13 79.7 4.7 57 35-94 197-253 (382)
243 1ixk_A Methyltransferase; open 98.7 2.6E-08 8.9E-13 75.8 6.3 59 35-93 103-164 (315)
244 3ll7_A Putative methyltransfer 98.7 1.7E-08 5.7E-13 79.6 5.1 45 50-94 93-137 (410)
245 3dou_A Ribosomal RNA large sub 98.7 3.5E-08 1.2E-12 69.9 6.4 36 48-83 23-58 (191)
246 1sqg_A SUN protein, FMU protei 98.7 2.6E-08 8.9E-13 78.8 6.2 61 33-93 229-291 (429)
247 3ajd_A Putative methyltransfer 98.7 1.4E-08 4.6E-13 75.8 4.2 53 41-93 74-129 (274)
248 3ldg_A Putative uncharacterize 98.7 3.2E-08 1.1E-12 77.4 6.2 60 35-94 179-278 (384)
249 3reo_A (ISO)eugenol O-methyltr 98.7 3.8E-08 1.3E-12 76.3 6.6 78 42-122 194-277 (368)
250 3p9c_A Caffeic acid O-methyltr 98.7 5.1E-08 1.8E-12 75.5 7.1 80 40-122 190-275 (364)
251 3v97_A Ribosomal RNA large sub 98.6 5.8E-08 2E-12 81.3 7.1 60 34-95 525-585 (703)
252 2oyr_A UPF0341 protein YHIQ; a 98.6 4E-08 1.4E-12 73.0 5.4 52 40-91 76-129 (258)
253 3lkd_A Type I restriction-modi 98.6 7.1E-08 2.4E-12 78.5 7.0 76 18-94 186-270 (542)
254 3lst_A CALO1 methyltransferase 98.6 3.8E-08 1.3E-12 75.6 5.1 80 40-122 174-263 (348)
255 2ar0_A M.ecoki, type I restric 98.6 6.1E-08 2.1E-12 78.9 6.4 69 25-94 145-233 (541)
256 2qm3_A Predicted methyltransfe 98.6 1.6E-07 5.6E-12 72.9 7.7 66 27-93 147-216 (373)
257 2plw_A Ribosomal RNA methyltra 98.6 8.8E-08 3E-12 67.5 5.6 36 48-83 20-59 (201)
258 2p41_A Type II methyltransfera 98.6 3.7E-08 1.3E-12 74.8 3.8 43 43-86 75-121 (305)
259 2cmg_A Spermidine synthase; tr 98.6 1.1E-07 3.6E-12 70.8 6.1 44 49-92 71-114 (262)
260 3giw_A Protein of unknown func 98.5 8.6E-08 3E-12 71.8 5.4 60 34-93 61-126 (277)
261 3khk_A Type I restriction-modi 98.5 1.3E-07 4.3E-12 77.1 6.6 75 18-94 214-305 (544)
262 2nyu_A Putative ribosomal RNA 98.5 1.8E-07 6.1E-12 65.6 6.5 37 48-84 20-67 (196)
263 2zfu_A Nucleomethylin, cerebra 98.5 2.4E-08 8.1E-13 71.3 1.9 60 49-117 66-126 (215)
264 3m6w_A RRNA methylase; rRNA me 98.5 7.8E-08 2.7E-12 76.9 4.6 55 39-93 90-147 (464)
265 1zg3_A Isoflavanone 4'-O-methy 98.5 5.6E-08 1.9E-12 74.9 2.8 72 49-122 192-267 (358)
266 2frx_A Hypothetical protein YE 98.5 2.2E-07 7.5E-12 74.6 6.0 55 39-93 104-163 (479)
267 1g60_A Adenine-specific methyl 98.5 4.9E-07 1.7E-11 66.9 7.4 59 35-94 198-256 (260)
268 3m4x_A NOL1/NOP2/SUN family pr 98.4 1.6E-07 5.4E-12 75.0 4.6 55 39-93 94-151 (456)
269 2k4m_A TR8_protein, UPF0146 pr 98.4 5.1E-07 1.7E-11 61.3 5.9 49 36-86 23-73 (153)
270 2b9e_A NOL1/NOP2/SUN domain fa 98.4 4.5E-07 1.5E-11 69.0 6.1 54 40-93 92-148 (309)
271 1wg8_A Predicted S-adenosylmet 98.3 7.5E-07 2.6E-11 66.7 6.2 55 36-90 8-62 (285)
272 3s1s_A Restriction endonucleas 98.3 1.7E-06 5.7E-11 73.1 8.8 72 16-88 282-364 (878)
273 3sso_A Methyltransferase; macr 98.3 5.5E-07 1.9E-11 70.8 5.3 49 36-85 203-260 (419)
274 2dul_A N(2),N(2)-dimethylguano 98.3 7.9E-07 2.7E-11 69.4 6.0 46 50-95 47-94 (378)
275 3v97_A Ribosomal RNA large sub 98.3 1.4E-06 4.6E-11 73.0 6.8 63 34-96 174-280 (703)
276 4a6d_A Hydroxyindole O-methylt 98.3 1.5E-06 5.1E-11 67.0 6.4 81 40-122 169-260 (353)
277 2qfm_A Spermine synthase; sper 98.2 1.8E-06 6.2E-11 66.9 5.5 44 50-93 188-232 (364)
278 3axs_A Probable N(2),N(2)-dime 98.2 1.4E-06 4.8E-11 68.3 4.4 49 49-97 51-102 (392)
279 3ufb_A Type I restriction-modi 98.1 6.5E-06 2.2E-10 66.8 7.6 65 27-92 195-274 (530)
280 2xyq_A Putative 2'-O-methyl tr 97.9 5.6E-06 1.9E-10 62.4 3.8 61 46-111 59-129 (290)
281 2ld4_A Anamorsin; methyltransf 97.8 1.9E-06 6.5E-11 59.5 -0.6 59 46-119 8-76 (176)
282 1boo_A Protein (N-4 cytosine-s 97.8 6.4E-05 2.2E-09 57.2 7.1 62 34-96 237-298 (323)
283 3cvo_A Methyltransferase-like 97.7 5.7E-05 2E-09 54.0 5.8 55 36-94 18-73 (202)
284 4gqb_A Protein arginine N-meth 97.7 3.1E-05 1E-09 64.1 4.1 60 51-111 358-434 (637)
285 3o4f_A Spermidine synthase; am 97.7 4.4E-05 1.5E-09 57.6 4.5 90 49-144 82-190 (294)
286 1eg2_A Modification methylase 97.6 0.00012 4E-09 55.8 6.8 60 34-94 227-289 (319)
287 3tka_A Ribosomal RNA small sub 97.6 0.00012 4.2E-09 56.1 6.1 54 36-89 43-99 (347)
288 4auk_A Ribosomal RNA large sub 97.6 7.8E-05 2.7E-09 57.9 4.9 34 49-82 210-243 (375)
289 3ua3_A Protein arginine N-meth 97.5 2.8E-05 9.7E-10 64.8 2.4 41 51-91 410-465 (745)
290 3gcz_A Polyprotein; flavivirus 97.4 0.00023 8E-09 53.1 5.0 48 40-87 80-129 (282)
291 3evf_A RNA-directed RNA polyme 97.3 0.00029 9.9E-09 52.5 5.2 45 40-84 64-110 (277)
292 3lkz_A Non-structural protein 97.3 0.00028 9.6E-09 53.1 5.1 47 37-83 81-129 (321)
293 3p8z_A Mtase, non-structural p 97.2 0.00048 1.6E-08 50.4 5.3 48 38-85 66-115 (267)
294 2py6_A Methyltransferase FKBM; 97.2 0.00062 2.1E-08 53.4 6.0 47 48-94 224-274 (409)
295 4fzv_A Putative methyltransfer 96.9 0.0006 2.1E-08 52.7 3.2 53 40-92 138-192 (359)
296 3eld_A Methyltransferase; flav 96.8 0.0027 9.3E-08 47.7 6.0 36 49-84 80-117 (300)
297 2qy6_A UPF0209 protein YFCK; s 96.6 0.0011 3.7E-08 49.0 2.6 33 50-82 60-106 (257)
298 3c6k_A Spermine synthase; sper 96.5 0.0053 1.8E-07 47.8 6.0 43 50-92 205-248 (381)
299 1g55_A DNA cytosine methyltran 96.2 0.0045 1.5E-07 47.4 4.5 42 52-93 3-47 (343)
300 2dph_A Formaldehyde dismutase; 95.9 0.019 6.6E-07 44.4 6.8 47 44-90 179-228 (398)
301 3g7u_A Cytosine-specific methy 95.8 0.011 3.9E-07 45.8 5.1 41 52-92 3-44 (376)
302 2px2_A Genome polyprotein [con 95.8 0.011 3.7E-07 43.7 4.4 43 39-81 62-106 (269)
303 2c7p_A Modification methylase 95.8 0.014 4.8E-07 44.4 5.3 43 51-93 11-54 (327)
304 3s2e_A Zinc-containing alcohol 95.5 0.042 1.4E-06 41.5 6.9 50 42-91 158-209 (340)
305 1f8f_A Benzyl alcohol dehydrog 95.4 0.033 1.1E-06 42.6 6.1 48 44-91 184-234 (371)
306 1pl8_A Human sorbitol dehydrog 95.0 0.056 1.9E-06 41.1 6.5 47 44-90 165-214 (356)
307 1kol_A Formaldehyde dehydrogen 94.9 0.072 2.5E-06 41.1 6.8 47 44-90 179-228 (398)
308 1uuf_A YAHK, zinc-type alcohol 94.9 0.069 2.4E-06 40.9 6.6 48 43-90 187-236 (369)
309 3two_A Mannitol dehydrogenase; 94.9 0.055 1.9E-06 41.0 6.0 50 42-91 168-219 (348)
310 3qv2_A 5-cytosine DNA methyltr 94.8 0.045 1.5E-06 41.7 5.3 43 51-93 10-56 (327)
311 3b5i_A S-adenosyl-L-methionine 94.8 0.034 1.2E-06 43.2 4.7 47 38-84 35-103 (374)
312 4f3n_A Uncharacterized ACR, CO 94.6 0.032 1.1E-06 44.1 4.2 42 51-92 138-186 (432)
313 3fpc_A NADP-dependent alcohol 94.5 0.092 3.1E-06 39.8 6.4 50 42-91 158-210 (352)
314 1zkd_A DUF185; NESG, RPR58, st 94.4 0.12 4E-06 40.4 6.8 42 51-92 81-131 (387)
315 1e3j_A NADP(H)-dependent ketos 94.3 0.11 3.7E-06 39.4 6.5 47 44-90 162-210 (352)
316 2wk1_A NOVP; transferase, O-me 94.3 0.068 2.3E-06 39.9 5.1 34 49-82 105-145 (282)
317 2qrv_A DNA (cytosine-5)-methyl 94.1 0.088 3E-06 39.5 5.5 43 50-92 15-60 (295)
318 3gms_A Putative NADPH:quinone 94.0 0.074 2.5E-06 40.1 5.0 48 43-90 137-187 (340)
319 1piw_A Hypothetical zinc-type 94.0 0.11 3.9E-06 39.4 6.1 48 43-90 172-221 (360)
320 4h0n_A DNMT2; SAH binding, tra 94.0 0.065 2.2E-06 40.9 4.6 42 52-93 4-48 (333)
321 1p0f_A NADP-dependent alcohol 93.9 0.11 3.9E-06 39.6 5.9 47 44-90 185-234 (373)
322 1pqw_A Polyketide synthase; ro 93.9 0.083 2.8E-06 36.5 4.7 46 45-90 33-81 (198)
323 1cdo_A Alcohol dehydrogenase; 93.9 0.12 3.9E-06 39.6 5.9 47 44-90 186-235 (374)
324 3m6i_A L-arabinitol 4-dehydrog 93.9 0.13 4.3E-06 39.2 6.1 49 43-91 172-223 (363)
325 2oo3_A Protein involved in cat 93.8 0.011 3.8E-07 44.1 0.0 45 50-94 91-135 (283)
326 3ubt_Y Modification methylase 93.7 0.089 3E-06 39.5 5.0 40 53-92 2-42 (331)
327 3uko_A Alcohol dehydrogenase c 93.7 0.1 3.5E-06 40.0 5.4 49 43-91 186-237 (378)
328 3uog_A Alcohol dehydrogenase; 93.6 0.11 3.8E-06 39.6 5.3 47 44-90 183-231 (363)
329 2fzw_A Alcohol dehydrogenase c 93.6 0.14 4.7E-06 39.1 5.9 47 44-90 184-233 (373)
330 1e3i_A Alcohol dehydrogenase, 93.5 0.14 4.9E-06 39.1 5.9 47 44-90 189-238 (376)
331 2jhf_A Alcohol dehydrogenase E 93.5 0.14 4.9E-06 39.0 5.9 47 44-90 185-234 (374)
332 2hcy_A Alcohol dehydrogenase 1 93.3 0.15 5.1E-06 38.5 5.6 49 42-90 161-212 (347)
333 1rjw_A ADH-HT, alcohol dehydro 93.3 0.24 8.2E-06 37.3 6.7 48 43-90 157-206 (339)
334 4ej6_A Putative zinc-binding d 93.1 0.22 7.5E-06 38.1 6.3 49 43-91 175-226 (370)
335 3goh_A Alcohol dehydrogenase, 93.1 0.13 4.6E-06 38.2 5.0 47 44-91 136-184 (315)
336 4b7c_A Probable oxidoreductase 93.0 0.15 5.3E-06 38.2 5.2 45 44-88 143-190 (336)
337 1v3u_A Leukotriene B4 12- hydr 92.8 0.18 6E-06 37.8 5.3 47 44-90 139-188 (333)
338 3jv7_A ADH-A; dehydrogenase, n 92.7 0.28 9.4E-06 37.0 6.3 45 47-91 168-215 (345)
339 1vj0_A Alcohol dehydrogenase, 92.3 0.32 1.1E-05 37.2 6.3 47 44-90 188-238 (380)
340 3me5_A Cytosine-specific methy 92.1 0.18 6E-06 40.5 4.7 41 52-92 89-130 (482)
341 2j3h_A NADP-dependent oxidored 92.0 0.21 7.2E-06 37.6 4.9 47 44-90 149-198 (345)
342 2eih_A Alcohol dehydrogenase; 91.8 0.3 1E-05 36.8 5.6 45 46-90 162-209 (343)
343 1jvb_A NAD(H)-dependent alcoho 91.8 0.5 1.7E-05 35.6 6.8 48 43-90 163-214 (347)
344 4eye_A Probable oxidoreductase 91.6 0.24 8.2E-06 37.4 4.8 47 44-90 153-202 (342)
345 4eez_A Alcohol dehydrogenase 1 91.6 0.49 1.7E-05 35.5 6.5 50 42-91 155-207 (348)
346 2dq4_A L-threonine 3-dehydroge 91.5 0.38 1.3E-05 36.2 5.9 45 45-90 160-207 (343)
347 3r24_A NSP16, 2'-O-methyl tran 91.5 0.19 6.4E-06 38.1 3.9 67 16-84 72-150 (344)
348 2d8a_A PH0655, probable L-thre 91.4 0.35 1.2E-05 36.5 5.5 46 44-90 162-210 (348)
349 3llv_A Exopolyphosphatase-rela 91.4 0.34 1.2E-05 31.4 4.8 38 51-90 6-47 (141)
350 2efj_A 3,7-dimethylxanthine me 91.4 0.1 3.6E-06 40.6 2.6 21 51-71 53-73 (384)
351 3ip1_A Alcohol dehydrogenase, 91.2 0.34 1.1E-05 37.5 5.4 45 47-91 210-257 (404)
352 2c0c_A Zinc binding alcohol de 91.1 0.48 1.6E-05 36.0 6.1 47 44-90 157-206 (362)
353 3jyn_A Quinone oxidoreductase; 91.0 0.31 1.1E-05 36.4 4.9 46 45-90 135-183 (325)
354 2h6e_A ADH-4, D-arabinose 1-de 91.0 0.52 1.8E-05 35.5 6.1 43 47-90 168-214 (344)
355 1iz0_A Quinone oxidoreductase; 91.0 0.27 9.4E-06 36.3 4.5 43 48-90 123-168 (302)
356 3fwz_A Inner membrane protein 90.9 0.53 1.8E-05 30.6 5.4 38 51-90 7-48 (140)
357 2cf5_A Atccad5, CAD, cinnamyl 90.9 0.63 2.2E-05 35.2 6.5 47 43-89 172-221 (357)
358 1yb5_A Quinone oxidoreductase; 90.7 0.42 1.4E-05 36.2 5.4 46 45-90 165-213 (351)
359 1yqd_A Sinapyl alcohol dehydro 90.1 0.87 3E-05 34.6 6.7 48 42-89 178-228 (366)
360 3qwb_A Probable quinone oxidor 89.8 0.42 1.4E-05 35.8 4.7 45 46-90 144-191 (334)
361 1qor_A Quinone oxidoreductase; 89.5 0.46 1.6E-05 35.4 4.7 46 45-90 135-183 (327)
362 1wly_A CAAR, 2-haloacrylate re 89.0 0.83 2.8E-05 34.1 5.8 46 45-90 140-188 (333)
363 4dup_A Quinone oxidoreductase; 88.7 0.49 1.7E-05 35.8 4.3 47 44-90 161-210 (353)
364 3iht_A S-adenosyl-L-methionine 88.5 1.1 3.7E-05 30.6 5.4 43 36-79 27-71 (174)
365 2j8z_A Quinone oxidoreductase; 88.2 0.56 1.9E-05 35.5 4.4 46 45-90 157-205 (354)
366 2g1u_A Hypothetical protein TM 88.0 0.99 3.4E-05 29.8 5.1 38 50-89 18-59 (155)
367 2zb4_A Prostaglandin reductase 87.6 1 3.4E-05 34.0 5.5 47 44-90 152-204 (357)
368 4dkj_A Cytosine-specific methy 87.5 0.58 2E-05 36.6 4.1 42 52-93 11-59 (403)
369 4a2c_A Galactitol-1-phosphate 87.3 1.8 6.1E-05 32.3 6.7 52 40-91 150-204 (346)
370 3swr_A DNA (cytosine-5)-methyl 87.3 0.75 2.6E-05 40.1 5.0 41 52-92 541-583 (1002)
371 2b5w_A Glucose dehydrogenase; 87.2 0.67 2.3E-05 35.1 4.3 47 44-90 160-220 (357)
372 1xa0_A Putative NADPH dependen 87.1 0.36 1.2E-05 36.0 2.7 46 45-90 143-192 (328)
373 4ft4_B DNA (cytosine-5)-methyl 86.7 0.58 2E-05 39.4 4.0 41 52-92 213-260 (784)
374 4fn4_A Short chain dehydrogena 86.2 1.8 6.2E-05 31.5 6.0 44 50-93 6-52 (254)
375 1lss_A TRK system potassium up 85.7 1.7 5.9E-05 27.5 5.2 38 51-90 4-45 (140)
376 3nx4_A Putative oxidoreductase 85.7 0.6 2.1E-05 34.7 3.3 38 53-90 149-189 (324)
377 1tt7_A YHFP; alcohol dehydroge 85.7 0.55 1.9E-05 35.0 3.1 45 46-90 145-193 (330)
378 1h2b_A Alcohol dehydrogenase; 85.6 2.5 8.5E-05 31.9 6.8 45 46-90 182-229 (359)
379 3vtf_A UDP-glucose 6-dehydroge 85.2 0.76 2.6E-05 36.4 3.7 37 52-90 22-62 (444)
380 2dpm_A M.dpnii 1, protein (ade 84.7 1.4 4.7E-05 32.7 4.8 51 36-89 22-72 (284)
381 1m6e_X S-adenosyl-L-methionnin 84.6 0.2 7E-06 38.6 0.2 69 51-120 52-153 (359)
382 3krt_A Crotonyl COA reductase; 84.5 0.96 3.3E-05 35.5 4.1 45 46-90 224-271 (456)
383 3gaz_A Alcohol dehydrogenase s 84.4 1.1 3.9E-05 33.6 4.3 46 44-90 144-192 (343)
384 2hmt_A YUAA protein; RCK, KTN, 84.3 1.4 4.8E-05 28.0 4.2 38 51-90 6-47 (144)
385 2vz8_A Fatty acid synthase; tr 84.2 0.26 8.9E-06 46.8 0.8 67 50-117 1240-1322(2512)
386 2cdc_A Glucose dehydrogenase g 84.1 1.7 5.9E-05 32.9 5.3 40 51-90 181-225 (366)
387 3fbg_A Putative arginate lyase 83.9 1.7 5.9E-05 32.6 5.2 41 50-90 150-193 (346)
388 3rkr_A Short chain oxidoreduct 83.5 3 0.0001 29.8 6.1 44 49-92 27-73 (262)
389 4a0s_A Octenoyl-COA reductase/ 83.4 1 3.5E-05 35.1 3.8 45 46-90 216-263 (447)
390 1zq9_A Probable dimethyladenos 82.9 0.7 2.4E-05 34.0 2.5 35 115-149 251-285 (285)
391 3iup_A Putative NADPH:quinone 82.5 1.5 5.2E-05 33.4 4.4 42 49-90 169-214 (379)
392 1rjd_A PPM1P, carboxy methyl t 82.5 3.6 0.00012 31.2 6.4 41 50-91 97-139 (334)
393 3qiv_A Short-chain dehydrogena 81.9 3.9 0.00013 28.9 6.2 43 50-92 8-53 (253)
394 4dvj_A Putative zinc-dependent 81.7 1.5 5.2E-05 33.3 4.1 41 50-90 171-215 (363)
395 2h1r_A Dimethyladenosine trans 81.5 1.2 4.2E-05 32.9 3.5 36 114-149 262-297 (299)
396 3ic5_A Putative saccharopine d 81.5 2.3 7.9E-05 25.9 4.3 37 51-89 5-46 (118)
397 4fgs_A Probable dehydrogenase 81.4 4 0.00014 30.0 6.1 43 50-92 28-73 (273)
398 3av4_A DNA (cytosine-5)-methyl 81.0 2.1 7.3E-05 38.4 5.2 42 51-92 851-894 (1330)
399 4g81_D Putative hexonate dehyd 80.8 3.4 0.00012 30.0 5.5 43 50-92 8-53 (255)
400 3h7a_A Short chain dehydrogena 80.5 4.1 0.00014 29.0 5.9 43 50-92 6-51 (252)
401 2g1p_A DNA adenine methylase; 80.5 1.9 6.4E-05 31.8 4.1 48 37-88 16-63 (278)
402 3tqh_A Quinone oxidoreductase; 79.9 3.4 0.00012 30.6 5.5 48 42-90 144-194 (321)
403 3l9w_A Glutathione-regulated p 79.0 1.5 5.2E-05 34.2 3.3 38 51-90 4-45 (413)
404 3c85_A Putative glutathione-re 78.5 3 0.0001 28.0 4.4 40 51-90 39-81 (183)
405 3tjr_A Short chain dehydrogena 78.4 5.2 0.00018 29.3 6.0 44 49-92 29-75 (301)
406 3ado_A Lambda-crystallin; L-gu 78.2 2.9 0.0001 31.5 4.6 41 51-91 6-48 (319)
407 2vn8_A Reticulon-4-interacting 78.2 2.6 8.8E-05 32.0 4.4 42 48-90 181-225 (375)
408 2dpo_A L-gulonate 3-dehydrogen 77.9 3.2 0.00011 31.2 4.7 39 52-90 7-47 (319)
409 4e12_A Diketoreductase; oxidor 77.2 3.6 0.00012 30.0 4.8 40 52-91 5-46 (283)
410 3ojo_A CAP5O; rossmann fold, c 77.0 2.2 7.6E-05 33.6 3.8 42 49-90 9-52 (431)
411 4g65_A TRK system potassium up 77.0 1.6 5.6E-05 34.5 3.0 40 51-92 3-46 (461)
412 3l4b_C TRKA K+ channel protien 76.7 2 6.7E-05 30.0 3.1 36 53-90 2-41 (218)
413 3ucx_A Short chain dehydrogena 76.7 7.4 0.00025 27.8 6.3 43 50-92 10-55 (264)
414 3lyl_A 3-oxoacyl-(acyl-carrier 76.3 5.5 0.00019 27.9 5.5 43 50-92 4-49 (247)
415 3tox_A Short chain dehydrogena 76.2 6.8 0.00023 28.4 6.1 43 50-92 7-52 (280)
416 3sju_A Keto reductase; short-c 75.7 6.9 0.00023 28.3 6.0 43 50-92 23-68 (279)
417 3imf_A Short chain dehydrogena 75.7 6.1 0.00021 28.1 5.6 43 50-92 5-50 (257)
418 4eso_A Putative oxidoreductase 74.7 6.7 0.00023 27.9 5.6 42 50-91 7-51 (255)
419 3gqv_A Enoyl reductase; medium 74.6 5 0.00017 30.4 5.1 41 49-90 163-206 (371)
420 1f0y_A HCDH, L-3-hydroxyacyl-C 74.5 4.6 0.00016 29.6 4.8 38 52-89 16-55 (302)
421 1yf3_A DNA adenine methylase; 74.4 2 6.9E-05 31.3 2.7 47 38-89 14-60 (259)
422 3o38_A Short chain dehydrogena 74.2 6.5 0.00022 27.9 5.5 43 50-92 21-67 (266)
423 3tfo_A Putative 3-oxoacyl-(acy 74.2 7.1 0.00024 28.1 5.7 43 50-92 3-48 (264)
424 2y0c_A BCEC, UDP-glucose dehyd 74.2 5 0.00017 31.9 5.2 42 50-91 7-50 (478)
425 1zcj_A Peroxisomal bifunctiona 74.1 5.4 0.00019 31.5 5.3 40 51-90 37-78 (463)
426 4dio_A NAD(P) transhydrogenase 74.0 4.3 0.00015 31.7 4.6 41 50-90 189-231 (405)
427 3abi_A Putative uncharacterize 73.5 5.1 0.00017 30.3 4.9 41 50-92 15-58 (365)
428 2vhw_A Alanine dehydrogenase; 73.2 6.5 0.00022 30.1 5.5 39 50-90 167-209 (377)
429 3v8b_A Putative dehydrogenase, 72.9 10 0.00036 27.4 6.4 43 50-92 27-72 (283)
430 3r1i_A Short-chain type dehydr 72.6 7.8 0.00027 28.0 5.6 42 50-91 31-75 (276)
431 3gaf_A 7-alpha-hydroxysteroid 72.6 7.4 0.00025 27.7 5.4 43 50-92 11-56 (256)
432 3ppi_A 3-hydroxyacyl-COA dehyd 72.2 6.6 0.00023 28.2 5.1 42 50-91 29-73 (281)
433 4ibo_A Gluconate dehydrogenase 71.9 8.1 0.00028 27.8 5.5 43 50-92 25-70 (271)
434 4e6p_A Probable sorbitol dehyd 71.9 8.6 0.00029 27.3 5.6 42 50-91 7-51 (259)
435 3f1l_A Uncharacterized oxidore 71.7 8.9 0.00031 27.1 5.7 42 50-91 11-55 (252)
436 3i1j_A Oxidoreductase, short c 71.7 7.4 0.00025 27.2 5.2 43 50-92 13-58 (247)
437 3f9i_A 3-oxoacyl-[acyl-carrier 71.7 8.3 0.00028 27.0 5.4 43 49-91 12-57 (249)
438 3rwb_A TPLDH, pyridoxal 4-dehy 71.7 8.4 0.00029 27.2 5.5 42 50-91 5-49 (247)
439 3oj0_A Glutr, glutamyl-tRNA re 71.6 8.3 0.00028 24.7 5.1 38 51-90 21-62 (144)
440 3p2y_A Alanine dehydrogenase/p 71.4 5.7 0.00019 30.8 4.7 41 50-90 183-225 (381)
441 3ged_A Short-chain dehydrogena 71.2 9 0.00031 27.6 5.5 39 52-90 3-44 (247)
442 3gvc_A Oxidoreductase, probabl 71.1 7.5 0.00026 28.1 5.2 42 50-91 28-72 (277)
443 1zej_A HBD-9, 3-hydroxyacyl-CO 71.0 6.4 0.00022 29.2 4.8 41 50-91 11-53 (293)
444 3lf2_A Short chain oxidoreduct 70.8 9.4 0.00032 27.2 5.6 42 50-91 7-51 (265)
445 4b79_A PA4098, probable short- 70.5 4.6 0.00016 29.1 3.8 39 50-88 10-51 (242)
446 3ioy_A Short-chain dehydrogena 70.4 10 0.00035 28.0 5.9 42 50-91 7-51 (319)
447 3zv4_A CIS-2,3-dihydrobiphenyl 70.3 9.5 0.00032 27.5 5.6 41 50-90 4-47 (281)
448 3n74_A 3-ketoacyl-(acyl-carrie 69.9 10 0.00035 26.8 5.6 42 50-91 8-52 (261)
449 2jah_A Clavulanic acid dehydro 69.7 12 0.00042 26.3 6.0 42 50-91 6-50 (247)
450 3uve_A Carveol dehydrogenase ( 69.7 13 0.00044 26.8 6.2 32 50-81 10-44 (286)
451 2eez_A Alanine dehydrogenase; 69.7 8.7 0.0003 29.2 5.5 39 50-90 165-207 (369)
452 3op4_A 3-oxoacyl-[acyl-carrier 69.6 8.5 0.00029 27.2 5.1 42 50-91 8-52 (248)
453 1iy8_A Levodione reductase; ox 69.5 10 0.00036 26.9 5.6 41 50-90 12-55 (267)
454 2b4q_A Rhamnolipids biosynthes 69.4 19 0.00066 25.8 7.1 41 50-90 28-71 (276)
455 4da9_A Short-chain dehydrogena 69.4 14 0.00049 26.6 6.4 42 49-90 27-72 (280)
456 3pgx_A Carveol dehydrogenase; 69.4 13 0.00045 26.6 6.2 32 49-80 13-47 (280)
457 4a27_A Synaptic vesicle membra 69.1 7.2 0.00025 29.2 4.8 45 44-89 136-184 (349)
458 3ce6_A Adenosylhomocysteinase; 68.8 9.3 0.00032 30.6 5.6 40 48-89 271-314 (494)
459 3nyw_A Putative oxidoreductase 68.7 10 0.00036 26.8 5.5 42 50-91 6-50 (250)
460 1id1_A Putative potassium chan 68.7 10 0.00036 24.5 5.1 30 51-82 3-36 (153)
461 3sx2_A Putative 3-ketoacyl-(ac 68.5 11 0.00038 26.9 5.6 32 50-81 12-46 (278)
462 4a7p_A UDP-glucose dehydrogena 68.3 3.7 0.00013 32.4 3.1 39 52-90 9-49 (446)
463 3e8x_A Putative NAD-dependent 68.2 10 0.00034 26.3 5.2 38 50-88 20-61 (236)
464 4dry_A 3-oxoacyl-[acyl-carrier 67.8 8 0.00027 28.0 4.7 42 50-91 32-76 (281)
465 4iin_A 3-ketoacyl-acyl carrier 67.7 11 0.00036 27.0 5.4 41 50-90 28-72 (271)
466 3t7c_A Carveol dehydrogenase; 67.7 13 0.00046 27.0 6.0 33 49-81 26-61 (299)
467 2ae2_A Protein (tropinone redu 67.7 15 0.00053 25.9 6.2 41 50-90 8-51 (260)
468 1zem_A Xylitol dehydrogenase; 67.5 15 0.00052 26.0 6.1 42 50-91 6-50 (262)
469 1x13_A NAD(P) transhydrogenase 67.5 7.7 0.00026 30.0 4.8 40 50-89 171-212 (401)
470 3svt_A Short-chain type dehydr 67.4 12 0.00041 26.9 5.6 43 50-92 10-55 (281)
471 3l6e_A Oxidoreductase, short-c 67.3 12 0.00042 26.1 5.5 41 51-91 3-46 (235)
472 3ftp_A 3-oxoacyl-[acyl-carrier 67.3 8.6 0.00029 27.7 4.8 42 50-91 27-71 (270)
473 4dqx_A Probable oxidoreductase 67.2 12 0.00041 27.0 5.6 41 50-90 26-69 (277)
474 4imr_A 3-oxoacyl-(acyl-carrier 67.1 6.9 0.00024 28.3 4.3 42 50-91 32-76 (275)
475 4fs3_A Enoyl-[acyl-carrier-pro 67.0 14 0.00049 26.2 5.9 43 50-92 5-52 (256)
476 2uyo_A Hypothetical protein ML 67.0 8 0.00027 28.9 4.6 54 38-92 90-144 (310)
477 3qlj_A Short chain dehydrogena 66.8 12 0.00041 27.6 5.6 33 49-81 25-60 (322)
478 3dii_A Short-chain dehydrogena 66.7 13 0.00043 26.2 5.5 40 51-90 2-44 (247)
479 3rd5_A Mypaa.01249.C; ssgcid, 66.4 17 0.00057 26.2 6.3 42 49-90 14-58 (291)
480 2rhc_B Actinorhodin polyketide 66.2 18 0.00061 25.9 6.4 41 50-90 21-64 (277)
481 3pxx_A Carveol dehydrogenase; 66.1 15 0.00051 26.2 5.9 32 50-81 9-43 (287)
482 3o26_A Salutaridine reductase; 65.6 11 0.00036 27.2 5.1 42 50-91 11-55 (311)
483 3awd_A GOX2181, putative polyo 65.5 20 0.00067 25.1 6.4 40 50-89 12-54 (260)
484 3ai3_A NADPH-sorbose reductase 65.4 14 0.00049 26.1 5.6 40 50-89 6-48 (263)
485 3tzq_B Short-chain type dehydr 65.4 9.7 0.00033 27.3 4.8 41 50-90 10-53 (271)
486 3vrd_B FCCB subunit, flavocyto 65.3 5.8 0.0002 30.0 3.7 33 51-83 2-38 (401)
487 3k31_A Enoyl-(acyl-carrier-pro 65.2 15 0.0005 26.8 5.8 39 50-88 29-72 (296)
488 3grk_A Enoyl-(acyl-carrier-pro 64.9 15 0.00052 26.6 5.8 40 49-88 29-73 (293)
489 3t4x_A Oxidoreductase, short c 64.9 11 0.00037 26.9 4.9 41 50-90 9-52 (267)
490 1ae1_A Tropinone reductase-I; 64.9 17 0.00058 25.9 6.0 41 50-90 20-63 (273)
491 3rih_A Short chain dehydrogena 64.6 9.9 0.00034 27.8 4.7 43 50-92 40-85 (293)
492 2wsb_A Galactitol dehydrogenas 64.4 15 0.00052 25.5 5.6 40 50-89 10-52 (254)
493 3tsc_A Putative oxidoreductase 64.3 18 0.0006 25.9 6.0 31 50-80 10-43 (277)
494 3l77_A Short-chain alcohol deh 64.1 17 0.00057 25.1 5.7 40 51-90 2-44 (235)
495 4egf_A L-xylulose reductase; s 63.8 12 0.00041 26.7 5.0 42 50-91 19-63 (266)
496 1nff_A Putative oxidoreductase 63.8 16 0.00055 25.9 5.7 40 50-89 6-48 (260)
497 2z1n_A Dehydrogenase; reductas 63.7 16 0.00055 25.8 5.6 41 50-90 6-49 (260)
498 3g0o_A 3-hydroxyisobutyrate de 63.4 11 0.00036 27.7 4.7 41 51-91 7-49 (303)
499 3mog_A Probable 3-hydroxybutyr 63.4 8.6 0.00029 30.6 4.4 39 52-90 6-46 (483)
500 3vtz_A Glucose 1-dehydrogenase 63.3 9.9 0.00034 27.3 4.5 37 49-85 12-51 (269)
No 1
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.65 E-value=5.9e-16 Score=116.12 Aligned_cols=86 Identities=24% Similarity=0.279 Sum_probs=78.1
Q ss_pred hHHHHHHHhhcccccccccccccCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 12 YVCRTVWKICIQFNKDFGQHILKNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 12 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
-....++.++..+++++||+|..++.+.+++++.+...++ +|||||||+|.+|..+++.+.+|+|+|+|++|++.++++
T Consensus 9 ~~~~~~~~~~~~~~k~~GQnfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~ 87 (271)
T 3fut_A 9 SVRALLERHGLFADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEET 87 (271)
T ss_dssp HHHHHHHHTTCCCSTTSSCCEECCHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHH
T ss_pred HHHHHHHhcCCCccccCCccccCCHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHh
Confidence 3567889999999999999999999999999999998888 999999999999999999999999999999999999987
Q ss_pred hcccCee
Q psy1134 92 YYFRNLC 98 (149)
Q Consensus 92 ~~~~~~~ 98 (149)
+...++.
T Consensus 88 ~~~~~v~ 94 (271)
T 3fut_A 88 LSGLPVR 94 (271)
T ss_dssp TTTSSEE
T ss_pred cCCCCEE
Confidence 6533343
No 2
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.59 E-value=3.2e-15 Score=113.36 Aligned_cols=80 Identities=30% Similarity=0.356 Sum_probs=60.8
Q ss_pred HHHHHHHhhcccccccccccccCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 13 VCRTVWKICIQFNKDFGQHILKNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
......+|+..+++.+||+|..++.+.+++++.+...++++|||||||+|.++..+++.+.+|+|+|+|+.|++.+++++
T Consensus 13 ~~~~~~~~~~~~~k~~GQnfL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~ 92 (295)
T 3gru_A 13 GLVPRGSHMFKPKKKLGQCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLK 92 (295)
T ss_dssp -----------------CCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHH
T ss_pred hhchhHhcCCCCccccCccccCCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHh
Confidence 44567788999999999999999999999999999888999999999999999999999999999999999999998876
No 3
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.57 E-value=4.4e-15 Score=110.49 Aligned_cols=71 Identities=34% Similarity=0.590 Sum_probs=61.3
Q ss_pred ccccccccccccCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhc
Q psy1134 23 QFNKDFGQHILKNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 23 ~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~ 93 (149)
.+++++||+|..++.+.+++++.+...++.+|||||||+|.+|..+++.+.+|+|+|+|++|++.+++++.
T Consensus 2 ~~~k~~GQnFL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~ 72 (255)
T 3tqs_A 2 PMRKRFGQHFLHDSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYN 72 (255)
T ss_dssp -------CCEECCHHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHT
T ss_pred CCCCcCCcccccCHHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHh
Confidence 35789999999999999999999999899999999999999999999999999999999999999988764
No 4
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.55 E-value=9.9e-15 Score=109.90 Aligned_cols=73 Identities=25% Similarity=0.344 Sum_probs=63.5
Q ss_pred hhcccccccccccccCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCe----EEEEeCChhHHhhhhhhh
Q psy1134 20 ICIQFNKDFGQHILKNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKK----VIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 20 ~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~----v~giD~s~~~i~~a~~~~ 92 (149)
.+..+++++||+|..++.+.+++++.+...++.+|||||||+|.++..|++.+.+ |+|+|+|+.|++.++++.
T Consensus 12 ~~~~~~k~~GQ~fL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~ 88 (279)
T 3uzu_A 12 QGHFARKRFGQNFLVDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF 88 (279)
T ss_dssp ------CCCSCCEECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH
T ss_pred cCCCccccCCccccCCHHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc
Confidence 3678889999999999999999999999888999999999999999999998766 999999999999998873
No 5
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.55 E-value=1.4e-14 Score=107.41 Aligned_cols=76 Identities=32% Similarity=0.493 Sum_probs=64.7
Q ss_pred cccccccccccccCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc-CCeEEEEeCChhHHhhhhhhhcccCee
Q psy1134 22 IQFNKDFGQHILKNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ-AKKVIACEIDPSCKSYFPSLYYFRNLC 98 (149)
Q Consensus 22 ~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~~~~~~~~~ 98 (149)
..+++++||+|..++.+.+++++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.++++ ...++.
T Consensus 3 ~~~~k~~GQnfl~d~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~~~~v~ 79 (249)
T 3ftd_A 3 VRLKKSFGQHLLVSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-GDERLE 79 (249)
T ss_dssp -----CCCSSCEECHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-CCTTEE
T ss_pred CCCCCcccccccCCHHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-cCCCeE
Confidence 46788999999999999999999999888999999999999999999999 48999999999999999887 433333
No 6
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.53 E-value=1.1e-14 Score=108.63 Aligned_cols=85 Identities=21% Similarity=0.164 Sum_probs=67.9
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcccCe--eec--------cCCCC
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYFRNL--CLQ--------EVPTD 105 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~~~~--~~~--------~~~~~ 105 (149)
+.+.+.++..+...++.+|||+|||+|.++..+++++.+|+|+|+|+.|++.|+++...... ... .....
T Consensus 31 ~~~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~ 110 (261)
T 3iv6_A 31 PSDRENDIFLENIVPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGH 110 (261)
T ss_dssp CCHHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCC
Confidence 45778888888888899999999999999999999999999999999999999988643211 111 12358
Q ss_pred CcchhhHHHHhccccc
Q psy1134 106 FDIKTLIDTVLNEINF 121 (149)
Q Consensus 106 ~d~v~~~~~~l~~~~~ 121 (149)
||.|++. .++++++.
T Consensus 111 fD~Vv~~-~~l~~~~~ 125 (261)
T 3iv6_A 111 FDFVLND-RLINRFTT 125 (261)
T ss_dssp CSEEEEE-SCGGGSCH
T ss_pred ccEEEEh-hhhHhCCH
Confidence 9999876 67776654
No 7
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.52 E-value=2.5e-14 Score=105.58 Aligned_cols=71 Identities=23% Similarity=0.328 Sum_probs=60.7
Q ss_pred ccccccccccccCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhc
Q psy1134 23 QFNKDFGQHILKNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 23 ~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~ 93 (149)
.+++.+||+|..++.+.+.+++.+...++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.+++++.
T Consensus 3 ~~~k~~gQ~fl~d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~ 73 (244)
T 1qam_A 3 EKNIKHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLV 73 (244)
T ss_dssp -------CCBCCCHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTT
T ss_pred CCCccCCccccCCHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhc
Confidence 46789999999999999999999998888999999999999999999999999999999999999988753
No 8
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.48 E-value=5.3e-14 Score=101.01 Aligned_cols=86 Identities=16% Similarity=0.109 Sum_probs=67.2
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcc-cCeeecc-------CCCCCc
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYF-RNLCLQE-------VPTDFD 107 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~-~~~~~~~-------~~~~~d 107 (149)
..+...+...+...++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++... .++.... ....||
T Consensus 37 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD 116 (216)
T 3ofk_A 37 ERHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFD 116 (216)
T ss_dssp HHHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEE
T ss_pred HHHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCcc
Confidence 45555565567767788999999999999999999988999999999999999987532 1222211 346899
Q ss_pred chhhHHHHhccccch
Q psy1134 108 IKTLIDTVLNEINFA 122 (149)
Q Consensus 108 ~v~~~~~~l~~~~~~ 122 (149)
.|++. .++++++.+
T Consensus 117 ~v~~~-~~l~~~~~~ 130 (216)
T 3ofk_A 117 LIVVA-EVLYYLEDM 130 (216)
T ss_dssp EEEEE-SCGGGSSSH
T ss_pred EEEEc-cHHHhCCCH
Confidence 99988 888888864
No 9
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.48 E-value=6.6e-14 Score=106.21 Aligned_cols=75 Identities=43% Similarity=0.497 Sum_probs=59.1
Q ss_pred HHhhcccccccccccccCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 18 WKICIQFNKDFGQHILKNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 18 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
.++...+++.+||+|..++.+.+.+++.+...++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++.
T Consensus 10 ~~~~~~~~k~~Gq~fl~~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~ 84 (299)
T 2h1r_A 10 HSSGRENLYFQGQHLLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRC 84 (299)
T ss_dssp -------------CEECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHH
T ss_pred ccccccchhccccceecCHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHH
Confidence 355677889999999999999999999998888899999999999999999999899999999999999998875
No 10
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.48 E-value=6.3e-14 Score=105.79 Aligned_cols=108 Identities=16% Similarity=0.127 Sum_probs=77.5
Q ss_pred HHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc-CCeEEEEeCChhHHhhhhhhhccc----Ceee-----ccCCCCC
Q psy1134 37 LIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ-AKKVIACEIDPSCKSYFPSLYYFR----NLCL-----QEVPTDF 106 (149)
Q Consensus 37 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~~~~~~----~~~~-----~~~~~~~ 106 (149)
.....++..+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++.... ++.. ......|
T Consensus 59 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~f 138 (302)
T 3hem_A 59 AKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPV 138 (302)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCC
T ss_pred HHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcCCCc
Confidence 35566778888888999999999999999999998 899999999999999998875332 1222 1236789
Q ss_pred cchhhHHHHhccccchhHhhccCChhhHHHHHHh-hhccC
Q psy1134 107 DIKTLIDTVLNEINFADKRARTMDLDDFVLLLAT-FNKHG 145 (149)
Q Consensus 107 d~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 145 (149)
|.|++. .++++++++....+.-....++..+.. +++.|
T Consensus 139 D~v~~~-~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG 177 (302)
T 3hem_A 139 DRIVSL-GAFEHFADGAGDAGFERYDTFFKKFYNLTPDDG 177 (302)
T ss_dssp SEEEEE-SCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTC
T ss_pred cEEEEc-chHHhcCccccccchhHHHHHHHHHHHhcCCCc
Confidence 999988 888888775321111223445544444 44444
No 11
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.48 E-value=9.7e-14 Score=104.61 Aligned_cols=69 Identities=65% Similarity=1.014 Sum_probs=60.6
Q ss_pred ccccccccccCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhc
Q psy1134 25 NKDFGQHILKNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 25 ~~~~g~~~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~ 93 (149)
++.+||+|..++.+.+++++.+...++.+|||||||+|.++..+++.+.+|+|+|+|+.|++.++++..
T Consensus 3 ~k~~gq~fl~d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~ 71 (285)
T 1zq9_A 3 NTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQ 71 (285)
T ss_dssp -----CCEECCHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHT
T ss_pred CCCCCcCccCCHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHH
Confidence 578999999999999999999998889999999999999999999999999999999999999988753
No 12
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.46 E-value=8.7e-14 Score=99.74 Aligned_cols=53 Identities=15% Similarity=0.063 Sum_probs=46.2
Q ss_pred HHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 40 QSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 40 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
...+..+...++.+|||+|||+|..+..|++.+.+|+|+|+|+.|++.|+++.
T Consensus 12 ~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~ 64 (203)
T 1pjz_A 12 QQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTER 64 (203)
T ss_dssp HHHHHHHCCCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHH
T ss_pred HHHHHhcccCCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHc
Confidence 33455666667889999999999999999999999999999999999998774
No 13
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.46 E-value=9.9e-14 Score=103.23 Aligned_cols=82 Identities=11% Similarity=0.114 Sum_probs=62.6
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhh--cc--cCeeecc-CCCCCcchh
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLY--YF--RNLCLQE-VPTDFDIKT 110 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~--~~--~~~~~~~-~~~~~d~v~ 110 (149)
+.+.+++.+..+ .+.+|||||||+|.++..|++.+.+|+|+|+|+.|++.|+++. .+ .+..... ...+||.|+
T Consensus 27 ~~l~~~l~~~~~--~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~ 104 (257)
T 4hg2_A 27 RALFRWLGEVAP--ARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAI 104 (257)
T ss_dssp HHHHHHHHHHSS--CSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEE
T ss_pred HHHHHHHHHhcC--CCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEE
Confidence 667777777765 4569999999999999999999999999999999999997642 22 2222222 236899999
Q ss_pred hHHHHhcccc
Q psy1134 111 LIDTVLNEIN 120 (149)
Q Consensus 111 ~~~~~l~~~~ 120 (149)
+. .+++++.
T Consensus 105 ~~-~~~h~~~ 113 (257)
T 4hg2_A 105 AA-QAMHWFD 113 (257)
T ss_dssp EC-SCCTTCC
T ss_pred Ee-eehhHhh
Confidence 87 6776653
No 14
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.45 E-value=3e-13 Score=100.33 Aligned_cols=57 Identities=12% Similarity=-0.064 Sum_probs=46.5
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
+.+.+.+...+...++.+|||+|||+|..+..|++.|.+|+|||+|+.|++.|+++.
T Consensus 54 ~~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~ 110 (252)
T 2gb4_A 54 QLLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQ 110 (252)
T ss_dssp HHHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred HHHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhc
Confidence 444454444434446789999999999999999999999999999999999997654
No 15
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.44 E-value=4.1e-13 Score=99.43 Aligned_cols=88 Identities=16% Similarity=0.129 Sum_probs=70.1
Q ss_pred cCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhh--cc--cCeeeccC-CCCCcc
Q psy1134 34 KNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLY--YF--RNLCLQEV-PTDFDI 108 (149)
Q Consensus 34 ~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~--~~--~~~~~~~~-~~~~d~ 108 (149)
..+.+.+.+.+.++..++.+|||||||+|.++..+++.+.+|+|+|+|+.|++.++++. .+ .+...... ...||.
T Consensus 18 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~ 97 (261)
T 3ege_A 18 PDIRIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDG 97 (261)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSE
T ss_pred ccHHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeE
Confidence 45778899999998888999999999999999999998899999999999999987764 11 22221122 368999
Q ss_pred hhhHHHHhccccch
Q psy1134 109 KTLIDTVLNEINFA 122 (149)
Q Consensus 109 v~~~~~~l~~~~~~ 122 (149)
|++. .+++++++.
T Consensus 98 v~~~-~~l~~~~~~ 110 (261)
T 3ege_A 98 VISI-LAIHHFSHL 110 (261)
T ss_dssp EEEE-SCGGGCSSH
T ss_pred EEEc-chHhhccCH
Confidence 9988 778877543
No 16
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.44 E-value=2.4e-13 Score=99.85 Aligned_cols=83 Identities=16% Similarity=0.163 Sum_probs=64.3
Q ss_pred HHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCC-eEEEEeCChhHHhhhhhhhcccCeeec-------cC-CCCCcc
Q psy1134 38 IIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAK-KVIACEIDPSCKSYFPSLYYFRNLCLQ-------EV-PTDFDI 108 (149)
Q Consensus 38 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~i~~a~~~~~~~~~~~~-------~~-~~~~d~ 108 (149)
....+.+.++..++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++....++... .. ...||.
T Consensus 32 ~~~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 111 (253)
T 3g5l_A 32 EWHELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNV 111 (253)
T ss_dssp HHHHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEE
T ss_pred hHHHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEE
Confidence 344566667766889999999999999999999976 999999999999999887542222211 12 368999
Q ss_pred hhhHHHHhccccc
Q psy1134 109 KTLIDTVLNEINF 121 (149)
Q Consensus 109 v~~~~~~l~~~~~ 121 (149)
|++. .+++++++
T Consensus 112 v~~~-~~l~~~~~ 123 (253)
T 3g5l_A 112 VLSS-LALHYIAS 123 (253)
T ss_dssp EEEE-SCGGGCSC
T ss_pred EEEc-hhhhhhhh
Confidence 9988 68888754
No 17
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.43 E-value=1.2e-13 Score=103.54 Aligned_cols=88 Identities=14% Similarity=0.146 Sum_probs=68.1
Q ss_pred cCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhc-------c-------cCeee
Q psy1134 34 KNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYY-------F-------RNLCL 99 (149)
Q Consensus 34 ~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~-------~-------~~~~~ 99 (149)
....+.+.+.+.+...++.+|||||||+|.++..+++.+.+|+|+|+|+.|++.|+++.. . .+...
T Consensus 41 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~ 120 (293)
T 3thr_A 41 RTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLT 120 (293)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG
T ss_pred hHHHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhh
Confidence 336777888888776678899999999999999999998899999999999999987531 1 11111
Q ss_pred c----cCCCCCcchhhHHHHhccccc
Q psy1134 100 Q----EVPTDFDIKTLIDTVLNEINF 121 (149)
Q Consensus 100 ~----~~~~~~d~v~~~~~~l~~~~~ 121 (149)
. .....||.|++...++++++.
T Consensus 121 ~~~~~~~~~~fD~V~~~g~~l~~~~~ 146 (293)
T 3thr_A 121 LDKDVPAGDGFDAVICLGNSFAHLPD 146 (293)
T ss_dssp HHHHSCCTTCEEEEEECTTCGGGSCC
T ss_pred CccccccCCCeEEEEEcChHHhhcCc
Confidence 1 134689999886568888776
No 18
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.42 E-value=3.8e-14 Score=104.40 Aligned_cols=71 Identities=27% Similarity=0.421 Sum_probs=65.7
Q ss_pred ccccccccccccCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhc
Q psy1134 23 QFNKDFGQHILKNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 23 ~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~ 93 (149)
.+++.+||+|..++.+.+.+++.+...++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++..
T Consensus 2 ~~~k~~gq~fl~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~ 72 (245)
T 1yub_A 2 NKNIKYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLK 72 (245)
T ss_dssp CCCCCSCCCBCCCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTT
T ss_pred CCCcccCCCCCCCHHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhc
Confidence 35789999999999999999999998888999999999999999999999999999999999999988753
No 19
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.42 E-value=1.7e-13 Score=112.13 Aligned_cols=89 Identities=15% Similarity=0.235 Sum_probs=68.9
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcccC---ee-----ecc-----CCCCCcchhhHHHHh
Q psy1134 50 PTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYFRN---LC-----LQE-----VPTDFDIKTLIDTVL 116 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~~~---~~-----~~~-----~~~~~d~v~~~~~~l 116 (149)
.+.+|||||||+|.++..|++.|+.|+|||+|+.+|+.|+.++...+ ++ ... .+..||.|+|. .++
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~-e~~ 144 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGL-SVF 144 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEE-SCH
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEEC-cch
Confidence 56799999999999999999999999999999999999987754322 11 111 24689999999 899
Q ss_pred ccccchhHhhccCChhhHHHHHHhhhccC
Q psy1134 117 NEINFADKRARTMDLDDFVLLLATFNKHG 145 (149)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (149)
+|++++.. .....+++.++++.+
T Consensus 145 ehv~~~~~------~~~~~~~~~tl~~~~ 167 (569)
T 4azs_A 145 HHIVHLHG------IDEVKRLLSRLADVT 167 (569)
T ss_dssp HHHHHHHC------HHHHHHHHHHHHHHS
T ss_pred hcCCCHHH------HHHHHHHHHHhcccc
Confidence 99987642 233445677777776
No 20
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.42 E-value=2.4e-13 Score=101.30 Aligned_cols=73 Identities=15% Similarity=0.152 Sum_probs=56.1
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc----CCeEEEEeCChhHHhhhhhhhccc----Ceeec-----c-CCCCCcchhhHHH
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQ----AKKVIACEIDPSCKSYFPSLYYFR----NLCLQ-----E-VPTDFDIKTLIDT 114 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~----~~~v~giD~s~~~i~~a~~~~~~~----~~~~~-----~-~~~~~d~v~~~~~ 114 (149)
.++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.|++++... ++... . ....+|.|++. .
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~-~ 147 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLN-F 147 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEE-S
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceee-e
Confidence 47889999999999999999886 458999999999999999875321 22221 1 22578888876 6
Q ss_pred Hhccccch
Q psy1134 115 VLNEINFA 122 (149)
Q Consensus 115 ~l~~~~~~ 122 (149)
++++++.+
T Consensus 148 ~l~~~~~~ 155 (261)
T 4gek_A 148 TLQFLEPS 155 (261)
T ss_dssp CGGGSCHH
T ss_pred eeeecCch
Confidence 78877654
No 21
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.42 E-value=3.1e-13 Score=96.69 Aligned_cols=80 Identities=14% Similarity=0.095 Sum_probs=61.8
Q ss_pred HHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcc----cCeeeccCCCCCcchhhHH
Q psy1134 38 IIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYF----RNLCLQEVPTDFDIKTLID 113 (149)
Q Consensus 38 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~----~~~~~~~~~~~~d~v~~~~ 113 (149)
....++..++ ++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++... .+.........||.|++.
T Consensus 33 ~~~~~~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~fD~v~~~- 109 (211)
T 3e23_A 33 TLTKFLGELP--AGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRLGRPVRTMLFHQLDAIDAYDAVWAH- 109 (211)
T ss_dssp HHHHHHTTSC--TTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEECCGGGCCCCSCEEEEEEC-
T ss_pred HHHHHHHhcC--CCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhcCCceEEeeeccCCCCCcEEEEEec-
Confidence 4444555544 578999999999999999999989999999999999999887522 222222245789999887
Q ss_pred HHhcccc
Q psy1134 114 TVLNEIN 120 (149)
Q Consensus 114 ~~l~~~~ 120 (149)
.++++++
T Consensus 110 ~~l~~~~ 116 (211)
T 3e23_A 110 ACLLHVP 116 (211)
T ss_dssp SCGGGSC
T ss_pred CchhhcC
Confidence 7888876
No 22
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.41 E-value=3.1e-13 Score=99.43 Aligned_cols=96 Identities=16% Similarity=0.217 Sum_probs=72.2
Q ss_pred cccccccccccC--HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc-CCeEEEEeCChhHHhhhhhhhcc-cCeee
Q psy1134 24 FNKDFGQHILKN--PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ-AKKVIACEIDPSCKSYFPSLYYF-RNLCL 99 (149)
Q Consensus 24 ~~~~~g~~~~~~--~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~~~~~-~~~~~ 99 (149)
++..++..+... ......+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++... .++..
T Consensus 27 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~ 106 (266)
T 3ujc_A 27 YEFIFGENYISSGGLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIF 106 (266)
T ss_dssp HHHHHCTTCCSTTHHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEE
T ss_pred HHHHhCCCccccchHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEE
Confidence 334444443332 556778888888888899999999999999999998 89999999999999999887532 22222
Q ss_pred c-------c-CCCCCcchhhHHHHhcccc
Q psy1134 100 Q-------E-VPTDFDIKTLIDTVLNEIN 120 (149)
Q Consensus 100 ~-------~-~~~~~d~v~~~~~~l~~~~ 120 (149)
. . ....||.|++. .++++++
T Consensus 107 ~~~d~~~~~~~~~~fD~v~~~-~~l~~~~ 134 (266)
T 3ujc_A 107 EANDILTKEFPENNFDLIYSR-DAILALS 134 (266)
T ss_dssp EECCTTTCCCCTTCEEEEEEE-SCGGGSC
T ss_pred EECccccCCCCCCcEEEEeHH-HHHHhcC
Confidence 1 1 23689999987 8888874
No 23
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.41 E-value=3.3e-13 Score=100.05 Aligned_cols=86 Identities=15% Similarity=0.193 Sum_probs=67.2
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc-CCeEEEEeCChhHHhhhhhhhccc----Ceeec-------cC-
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ-AKKVIACEIDPSCKSYFPSLYYFR----NLCLQ-------EV- 102 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~~~~~~----~~~~~-------~~- 102 (149)
..+.+.+++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++.... ++... ..
T Consensus 47 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 126 (273)
T 3bus_A 47 DRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFE 126 (273)
T ss_dssp HHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSC
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCC
Confidence 356677888888888999999999999999999886 789999999999999998775321 12211 11
Q ss_pred CCCCcchhhHHHHhccccch
Q psy1134 103 PTDFDIKTLIDTVLNEINFA 122 (149)
Q Consensus 103 ~~~~d~v~~~~~~l~~~~~~ 122 (149)
...||.|++. .+++++++.
T Consensus 127 ~~~fD~v~~~-~~l~~~~~~ 145 (273)
T 3bus_A 127 DASFDAVWAL-ESLHHMPDR 145 (273)
T ss_dssp TTCEEEEEEE-SCTTTSSCH
T ss_pred CCCccEEEEe-chhhhCCCH
Confidence 2579999887 888887654
No 24
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.41 E-value=1.7e-13 Score=99.67 Aligned_cols=82 Identities=18% Similarity=0.191 Sum_probs=61.5
Q ss_pred HHHHHHcC-CCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcc------cCeeeccCCCCCcchhhH
Q psy1134 40 QSIVDKGA-IRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYF------RNLCLQEVPTDFDIKTLI 112 (149)
Q Consensus 40 ~~~~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~------~~~~~~~~~~~~d~v~~~ 112 (149)
+.+.+.+. ..++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.|+++... .+.........||.|++.
T Consensus 31 ~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~ 110 (250)
T 2p7i_A 31 PFMVRAFTPFFRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLPRRYDNIVLT 110 (250)
T ss_dssp HHHHHHHGGGCCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCSSCEEEEEEE
T ss_pred HHHHHHHHhhcCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcCcCCcccEEEEh
Confidence 33444443 24677899999999999999999988999999999999999887532 111111234689999988
Q ss_pred HHHhccccch
Q psy1134 113 DTVLNEINFA 122 (149)
Q Consensus 113 ~~~l~~~~~~ 122 (149)
.++++++++
T Consensus 111 -~~l~~~~~~ 119 (250)
T 2p7i_A 111 -HVLEHIDDP 119 (250)
T ss_dssp -SCGGGCSSH
T ss_pred -hHHHhhcCH
Confidence 888988754
No 25
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.41 E-value=4.5e-13 Score=96.28 Aligned_cols=84 Identities=24% Similarity=0.278 Sum_probs=64.5
Q ss_pred HHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhc----ccCeeec--cCCCCCcchhhHH
Q psy1134 40 QSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYY----FRNLCLQ--EVPTDFDIKTLID 113 (149)
Q Consensus 40 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~----~~~~~~~--~~~~~~d~v~~~~ 113 (149)
..+++.+...++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++.. +...+.. ..+..||.|++.
T Consensus 35 ~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~- 113 (220)
T 3hnr_A 35 EDILEDVVNKSFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVPTSIDTIVST- 113 (220)
T ss_dssp HHHHHHHHHTCCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCCSCCSEEEEE-
T ss_pred HHHHHHhhccCCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCCCCeEEEEEC-
Confidence 345555555578899999999999999999999999999999999999988754 1111221 223789999988
Q ss_pred HHhccccchhH
Q psy1134 114 TVLNEINFADK 124 (149)
Q Consensus 114 ~~l~~~~~~~~ 124 (149)
.++++++.+..
T Consensus 114 ~~l~~~~~~~~ 124 (220)
T 3hnr_A 114 YAFHHLTDDEK 124 (220)
T ss_dssp SCGGGSCHHHH
T ss_pred cchhcCChHHH
Confidence 88888876543
No 26
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.41 E-value=3.1e-13 Score=99.82 Aligned_cols=73 Identities=11% Similarity=0.084 Sum_probs=57.7
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhc---c--cCeeeccCCCCCcchhhHHHHhccccch
Q psy1134 50 PTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYY---F--RNLCLQEVPTDFDIKTLIDTVLNEINFA 122 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~---~--~~~~~~~~~~~~d~v~~~~~~l~~~~~~ 122 (149)
++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|+++.. + .++........||.|++..+++++++.+
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~~~~ 127 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSLGRRFSAVTCMFSSIGHLAGQ 127 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCCSCCEEEEEECTTGGGGSCHH
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCccCCcCEEEEcCchhhhcCCH
Confidence 56899999999999999999998899999999999999988743 1 1111112357899999884488888654
No 27
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.40 E-value=8.7e-13 Score=95.91 Aligned_cols=107 Identities=9% Similarity=-0.066 Sum_probs=64.4
Q ss_pred hhHHHHHHHhhcccccccccccccCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCC-eEEEEeCChhHHhhhh
Q psy1134 11 YYVCRTVWKICIQFNKDFGQHILKNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAK-KVIACEIDPSCKSYFP 89 (149)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~i~~a~ 89 (149)
|......+.|........+..... ....+...++..++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++
T Consensus 7 y~~~~~~~~y~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~ 83 (243)
T 3bkw_A 7 YDQPDFFAGYSQLGRSIEGLDGAA---EWPALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARAR 83 (243)
T ss_dssp ------------------CGGGCT---THHHHHHHSCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred hcCHHHHHHHHHhccCCccHHHHH---hHHHHHHhccccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHH
Confidence 333345555555444333211111 123466677767788999999999999999999877 9999999999999998
Q ss_pred hhhcccCeeec-----c---CCCCCcchhhHHHHhccccc
Q psy1134 90 SLYYFRNLCLQ-----E---VPTDFDIKTLIDTVLNEINF 121 (149)
Q Consensus 90 ~~~~~~~~~~~-----~---~~~~~d~v~~~~~~l~~~~~ 121 (149)
++....++... . ....||.|++. .++++++.
T Consensus 84 ~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~-~~l~~~~~ 122 (243)
T 3bkw_A 84 AAGPDTGITYERADLDKLHLPQDSFDLAYSS-LALHYVED 122 (243)
T ss_dssp HTSCSSSEEEEECCGGGCCCCTTCEEEEEEE-SCGGGCSC
T ss_pred HhcccCCceEEEcChhhccCCCCCceEEEEe-ccccccch
Confidence 87543222221 1 23579999887 67777753
No 28
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.40 E-value=7.1e-13 Score=99.08 Aligned_cols=83 Identities=16% Similarity=0.213 Sum_probs=65.0
Q ss_pred HHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc-CCeEEEEeCChhHHhhhhhhhccc----Ceee-----ccCCCCCc
Q psy1134 38 IIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ-AKKVIACEIDPSCKSYFPSLYYFR----NLCL-----QEVPTDFD 107 (149)
Q Consensus 38 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~~~~~~----~~~~-----~~~~~~~d 107 (149)
....+++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++.... ++.. ...+..||
T Consensus 52 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~fD 131 (287)
T 1kpg_A 52 KIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVD 131 (287)
T ss_dssp HHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCS
T ss_pred HHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCee
Confidence 5566777777778899999999999999999955 889999999999999998875321 2221 22447899
Q ss_pred chhhHHHHhccccc
Q psy1134 108 IKTLIDTVLNEINF 121 (149)
Q Consensus 108 ~v~~~~~~l~~~~~ 121 (149)
.|++. .++++++.
T Consensus 132 ~v~~~-~~l~~~~~ 144 (287)
T 1kpg_A 132 RIVSI-GAFEHFGH 144 (287)
T ss_dssp EEEEE-SCGGGTCT
T ss_pred EEEEe-CchhhcCh
Confidence 99988 78888753
No 29
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.40 E-value=4.5e-13 Score=97.82 Aligned_cols=86 Identities=13% Similarity=0.130 Sum_probs=65.2
Q ss_pred HHHHHHHHHHcCC-CCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcccCeeec----c-CCCCCcch
Q psy1134 36 PLIIQSIVDKGAI-RPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYFRNLCLQ----E-VPTDFDIK 109 (149)
Q Consensus 36 ~~~~~~~~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~----~-~~~~~d~v 109 (149)
..+...+...++. .++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.++++......+.. . ....||.|
T Consensus 26 ~~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~d~~~~~~~~~~~~fD~i 105 (240)
T 3dli_A 26 ELVKARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGKFNVVKSDAIEYLKSLPDKYLDGV 105 (240)
T ss_dssp HHHHHHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTTSEEECSCHHHHHHTSCTTCBSEE
T ss_pred HHHHHHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhhcceeeccHHHHhhhcCCCCeeEE
Confidence 3445555555543 3568999999999999999999888999999999999999987444333322 1 34789999
Q ss_pred hhHHHHhccccch
Q psy1134 110 TLIDTVLNEINFA 122 (149)
Q Consensus 110 ~~~~~~l~~~~~~ 122 (149)
++. .++++++.+
T Consensus 106 ~~~-~~l~~~~~~ 117 (240)
T 3dli_A 106 MIS-HFVEHLDPE 117 (240)
T ss_dssp EEE-SCGGGSCGG
T ss_pred EEC-CchhhCCcH
Confidence 987 888888743
No 30
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.40 E-value=5.7e-13 Score=100.38 Aligned_cols=84 Identities=19% Similarity=0.245 Sum_probs=64.5
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhccc------Ceeec-------cC
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYFR------NLCLQ-------EV 102 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~~------~~~~~-------~~ 102 (149)
......+++.+... +.+|||||||+|.++..+++.+.+|+|+|+|+.+++.|+++.... ++... ..
T Consensus 69 ~~~~~~~~~~~~~~-~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 147 (299)
T 3g2m_A 69 TSEAREFATRTGPV-SGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL 147 (299)
T ss_dssp HHHHHHHHHHHCCC-CSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC
T ss_pred cHHHHHHHHhhCCC-CCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc
Confidence 55667777777654 449999999999999999999999999999999999999875432 22221 13
Q ss_pred CCCCcchhhHHHHhcccc
Q psy1134 103 PTDFDIKTLIDTVLNEIN 120 (149)
Q Consensus 103 ~~~~d~v~~~~~~l~~~~ 120 (149)
...||.|++...++++++
T Consensus 148 ~~~fD~v~~~~~~~~~~~ 165 (299)
T 3g2m_A 148 DKRFGTVVISSGSINELD 165 (299)
T ss_dssp SCCEEEEEECHHHHTTSC
T ss_pred CCCcCEEEECCcccccCC
Confidence 578998887657777665
No 31
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.39 E-value=7.9e-13 Score=100.32 Aligned_cols=84 Identities=17% Similarity=0.210 Sum_probs=66.5
Q ss_pred HHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc-CCeEEEEeCChhHHhhhhhhhccc----Ceee-----ccCCCCC
Q psy1134 37 LIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ-AKKVIACEIDPSCKSYFPSLYYFR----NLCL-----QEVPTDF 106 (149)
Q Consensus 37 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~~~~~~----~~~~-----~~~~~~~ 106 (149)
.....+++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++.... ++.. ...+..|
T Consensus 77 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~f 156 (318)
T 2fk8_A 77 AKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPV 156 (318)
T ss_dssp HHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCC
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCc
Confidence 45567777788778899999999999999999988 889999999999999998875321 1222 2234789
Q ss_pred cchhhHHHHhccccc
Q psy1134 107 DIKTLIDTVLNEINF 121 (149)
Q Consensus 107 d~v~~~~~~l~~~~~ 121 (149)
|.|++. .++++++.
T Consensus 157 D~v~~~-~~l~~~~~ 170 (318)
T 2fk8_A 157 DRIVSI-EAFEHFGH 170 (318)
T ss_dssp SEEEEE-SCGGGTCG
T ss_pred CEEEEe-ChHHhcCH
Confidence 999887 78887753
No 32
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.39 E-value=2.3e-13 Score=98.75 Aligned_cols=87 Identities=10% Similarity=0.166 Sum_probs=65.6
Q ss_pred HHHHHHHHHHcC-CCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhccc-Ceeec-------cCCC
Q psy1134 36 PLIIQSIVDKGA-IRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYYFR-NLCLQ-------EVPT 104 (149)
Q Consensus 36 ~~~~~~~~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~~~-~~~~~-------~~~~ 104 (149)
......+...+. ..++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++.... ++... ..+.
T Consensus 29 ~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~ 108 (234)
T 3dtn_A 29 DDFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEE 108 (234)
T ss_dssp HHHHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCS
T ss_pred HHHHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCC
Confidence 344466666665 356789999999999999999998 779999999999999998875322 22221 1236
Q ss_pred CCcchhhHHHHhccccchh
Q psy1134 105 DFDIKTLIDTVLNEINFAD 123 (149)
Q Consensus 105 ~~d~v~~~~~~l~~~~~~~ 123 (149)
.||.|++. .++++++.+.
T Consensus 109 ~fD~v~~~-~~l~~~~~~~ 126 (234)
T 3dtn_A 109 KYDMVVSA-LSIHHLEDED 126 (234)
T ss_dssp CEEEEEEE-SCGGGSCHHH
T ss_pred CceEEEEe-CccccCCHHH
Confidence 89999888 7888886543
No 33
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.39 E-value=4.8e-13 Score=96.20 Aligned_cols=86 Identities=15% Similarity=0.246 Sum_probs=66.3
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC--CeEEEEeCChhHHhhhhhhhccc--------Ceeecc----
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA--KKVIACEIDPSCKSYFPSLYYFR--------NLCLQE---- 101 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~i~~a~~~~~~~--------~~~~~~---- 101 (149)
+...+.+.+.+...++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.+++++... ++....
T Consensus 15 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (217)
T 3jwh_A 15 QQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALT 94 (217)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTT
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcc
Confidence 5566777777766678899999999999999999984 69999999999999998875321 222221
Q ss_pred ----CCCCCcchhhHHHHhccccch
Q psy1134 102 ----VPTDFDIKTLIDTVLNEINFA 122 (149)
Q Consensus 102 ----~~~~~d~v~~~~~~l~~~~~~ 122 (149)
....||.|++. .++++++.+
T Consensus 95 ~~~~~~~~fD~v~~~-~~l~~~~~~ 118 (217)
T 3jwh_A 95 YQDKRFHGYDAATVI-EVIEHLDLS 118 (217)
T ss_dssp SCCGGGCSCSEEEEE-SCGGGCCHH
T ss_pred cccccCCCcCEEeeH-HHHHcCCHH
Confidence 11589999987 888888654
No 34
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.39 E-value=2e-13 Score=101.87 Aligned_cols=85 Identities=18% Similarity=0.198 Sum_probs=65.2
Q ss_pred HHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhh---cc--cCeeeccCCCCCcchhh
Q psy1134 37 LIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLY---YF--RNLCLQEVPTDFDIKTL 111 (149)
Q Consensus 37 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~---~~--~~~~~~~~~~~~d~v~~ 111 (149)
.+...+++.+...++.+|||||||+|.++..+++.+.+|+|+|+|+.|++.++++. .+ .+......+..||.|++
T Consensus 44 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~ 123 (279)
T 3ccf_A 44 QYGEDLLQLLNPQPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRVDKPLDAVFS 123 (279)
T ss_dssp SSCCHHHHHHCCCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCCSSCEEEEEE
T ss_pred HHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCcCCCcCEEEE
Confidence 34456677777778889999999999999999998889999999999999998764 11 11111123468999988
Q ss_pred HHHHhccccch
Q psy1134 112 IDTVLNEINFA 122 (149)
Q Consensus 112 ~~~~l~~~~~~ 122 (149)
. .++++++++
T Consensus 124 ~-~~l~~~~d~ 133 (279)
T 3ccf_A 124 N-AMLHWVKEP 133 (279)
T ss_dssp E-SCGGGCSCH
T ss_pred c-chhhhCcCH
Confidence 7 778877643
No 35
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.38 E-value=5.7e-13 Score=95.85 Aligned_cols=86 Identities=15% Similarity=0.245 Sum_probs=66.0
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC--CeEEEEeCChhHHhhhhhhhccc--------Ceeecc----
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA--KKVIACEIDPSCKSYFPSLYYFR--------NLCLQE---- 101 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~i~~a~~~~~~~--------~~~~~~---- 101 (149)
+...+.+.+.+...++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.+++++... ++....
T Consensus 15 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (219)
T 3jwg_A 15 QQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLV 94 (219)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSS
T ss_pred HHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccc
Confidence 5556667677665678899999999999999999885 69999999999999998875321 222211
Q ss_pred ----CCCCCcchhhHHHHhccccch
Q psy1134 102 ----VPTDFDIKTLIDTVLNEINFA 122 (149)
Q Consensus 102 ----~~~~~d~v~~~~~~l~~~~~~ 122 (149)
....||.|++. .++++++.+
T Consensus 95 ~~~~~~~~fD~V~~~-~~l~~~~~~ 118 (219)
T 3jwg_A 95 YRDKRFSGYDAATVI-EVIEHLDEN 118 (219)
T ss_dssp SCCGGGTTCSEEEEE-SCGGGCCHH
T ss_pred ccccccCCCCEEEEH-HHHHhCCHH
Confidence 12589999987 888888654
No 36
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.38 E-value=8.6e-13 Score=97.29 Aligned_cols=83 Identities=14% Similarity=0.204 Sum_probs=64.7
Q ss_pred HHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcc---cCeee-------ccC-CCCCc
Q psy1134 39 IQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYF---RNLCL-------QEV-PTDFD 107 (149)
Q Consensus 39 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~---~~~~~-------~~~-~~~~d 107 (149)
...+++.+...++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.|+++... .++.. ..+ ...||
T Consensus 26 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD 105 (260)
T 1vl5_A 26 LAKLMQIAALKGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFH 105 (260)
T ss_dssp HHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEE
T ss_pred HHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEE
Confidence 45566777777889999999999999999999988999999999999999876421 11211 112 26899
Q ss_pred chhhHHHHhccccch
Q psy1134 108 IKTLIDTVLNEINFA 122 (149)
Q Consensus 108 ~v~~~~~~l~~~~~~ 122 (149)
.|++. .++++++++
T Consensus 106 ~V~~~-~~l~~~~d~ 119 (260)
T 1vl5_A 106 IVTCR-IAAHHFPNP 119 (260)
T ss_dssp EEEEE-SCGGGCSCH
T ss_pred EEEEh-hhhHhcCCH
Confidence 99887 788888754
No 37
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.38 E-value=9.6e-13 Score=96.56 Aligned_cols=85 Identities=8% Similarity=0.048 Sum_probs=67.6
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc-CCeEEEEeCChhHHhhhhhhhccc----Ceeecc-------CC
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ-AKKVIACEIDPSCKSYFPSLYYFR----NLCLQE-------VP 103 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~~~~~~----~~~~~~-------~~ 103 (149)
+.....++..+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++.... ++.... ..
T Consensus 22 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 101 (256)
T 1nkv_A 22 EEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVAN 101 (256)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCS
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcC
Confidence 677888899998888999999999999999999987 779999999999999998775321 222211 23
Q ss_pred CCCcchhhHHHHhccccc
Q psy1134 104 TDFDIKTLIDTVLNEINF 121 (149)
Q Consensus 104 ~~~d~v~~~~~~l~~~~~ 121 (149)
..||.|++. .+++++++
T Consensus 102 ~~fD~V~~~-~~~~~~~~ 118 (256)
T 1nkv_A 102 EKCDVAACV-GATWIAGG 118 (256)
T ss_dssp SCEEEEEEE-SCGGGTSS
T ss_pred CCCCEEEEC-CChHhcCC
Confidence 679999886 67776653
No 38
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.37 E-value=3.4e-13 Score=96.49 Aligned_cols=82 Identities=16% Similarity=0.105 Sum_probs=61.9
Q ss_pred HHHHHHHcC-CCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcccCeeec-------cCCCCCcchh
Q psy1134 39 IQSIVDKGA-IRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYFRNLCLQ-------EVPTDFDIKT 110 (149)
Q Consensus 39 ~~~~~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~-------~~~~~~d~v~ 110 (149)
...+.+.+. ..++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++.. ..++... .....||.|+
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~-~~~~~~~~~d~~~~~~~~~~D~v~ 112 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGRHG-LDNVEFRQQDLFDWTPDRQWDAVF 112 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGGGC-CTTEEEEECCTTSCCCSSCEEEEE
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHhcC-CCCeEEEecccccCCCCCceeEEE
Confidence 344555554 456779999999999999999999999999999999999998732 1222221 1346899999
Q ss_pred hHHHHhccccch
Q psy1134 111 LIDTVLNEINFA 122 (149)
Q Consensus 111 ~~~~~l~~~~~~ 122 (149)
+. .++++++.+
T Consensus 113 ~~-~~l~~~~~~ 123 (218)
T 3ou2_A 113 FA-HWLAHVPDD 123 (218)
T ss_dssp EE-SCGGGSCHH
T ss_pred Ee-chhhcCCHH
Confidence 87 788888753
No 39
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.37 E-value=3.7e-13 Score=95.69 Aligned_cols=69 Identities=14% Similarity=0.150 Sum_probs=55.1
Q ss_pred CCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhc---ccCeee--cc-CCCCCcchhhHHHHhcccc
Q psy1134 51 TDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYY---FRNLCL--QE-VPTDFDIKTLIDTVLNEIN 120 (149)
Q Consensus 51 ~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~---~~~~~~--~~-~~~~~d~v~~~~~~l~~~~ 120 (149)
+.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.++++.. +...+. .. ....||.|++. .++++++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~-~~l~~~~ 116 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAW-YSLIHMG 116 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEE-SSSTTCC
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEeh-hhHhcCC
Confidence 7799999999999999999998899999999999999988632 211122 12 24789999887 7888775
No 40
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.37 E-value=1.2e-12 Score=95.24 Aligned_cols=84 Identities=18% Similarity=0.094 Sum_probs=65.4
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcccCeeec-------c-CCCCCc
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYFRNLCLQ-------E-VPTDFD 107 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~-------~-~~~~~d 107 (149)
..+...+...++ ++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++....++... . ....||
T Consensus 41 ~~~~~~l~~~~~--~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD 118 (242)
T 3l8d_A 41 STIIPFFEQYVK--KEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFE 118 (242)
T ss_dssp TTHHHHHHHHSC--TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEE
T ss_pred HHHHHHHHHHcC--CCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCcc
Confidence 345666666665 678999999999999999999999999999999999999887533333221 1 246899
Q ss_pred chhhHHHHhccccch
Q psy1134 108 IKTLIDTVLNEINFA 122 (149)
Q Consensus 108 ~v~~~~~~l~~~~~~ 122 (149)
.|++. .++++++++
T Consensus 119 ~v~~~-~~l~~~~~~ 132 (242)
T 3l8d_A 119 AIMAI-NSLEWTEEP 132 (242)
T ss_dssp EEEEE-SCTTSSSCH
T ss_pred EEEEc-ChHhhccCH
Confidence 99988 888887654
No 41
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.36 E-value=1.5e-12 Score=97.49 Aligned_cols=89 Identities=13% Similarity=0.156 Sum_probs=68.0
Q ss_pred ccCHHHHHHHHHHc-CCCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhhcccC--eee-------
Q psy1134 33 LKNPLIIQSIVDKG-AIRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLYYFRN--LCL------- 99 (149)
Q Consensus 33 ~~~~~~~~~~~~~l-~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~~~~~--~~~------- 99 (149)
+.++.+...+...+ ...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++..... +..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~ 83 (284)
T 3gu3_A 4 YYNDDYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATE 83 (284)
T ss_dssp TCCHHHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTT
T ss_pred ccchHHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhh
Confidence 34577778787776 4557889999999999999999987 5799999999999999988753221 111
Q ss_pred ccCCCCCcchhhHHHHhccccch
Q psy1134 100 QEVPTDFDIKTLIDTVLNEINFA 122 (149)
Q Consensus 100 ~~~~~~~d~v~~~~~~l~~~~~~ 122 (149)
...+..||.|++. .+++++++.
T Consensus 84 ~~~~~~fD~v~~~-~~l~~~~~~ 105 (284)
T 3gu3_A 84 IELNDKYDIAICH-AFLLHMTTP 105 (284)
T ss_dssp CCCSSCEEEEEEE-SCGGGCSSH
T ss_pred cCcCCCeeEEEEC-ChhhcCCCH
Confidence 1134689999887 777877654
No 42
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.36 E-value=1.1e-12 Score=96.22 Aligned_cols=85 Identities=12% Similarity=0.096 Sum_probs=65.5
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhh---cccCeeec--cCCCCCcc
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLY---YFRNLCLQ--EVPTDFDI 108 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~---~~~~~~~~--~~~~~~d~ 108 (149)
......++..+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.++++. .+...+.. .....||.
T Consensus 19 ~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~ 98 (259)
T 2p35_A 19 TRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWKPAQKADL 98 (259)
T ss_dssp GHHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCCCSSCEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcCccCCcCE
Confidence 455667888888778889999999999999999998 889999999999999998762 11111111 13467999
Q ss_pred hhhHHHHhccccc
Q psy1134 109 KTLIDTVLNEINF 121 (149)
Q Consensus 109 v~~~~~~l~~~~~ 121 (149)
|++. .+++++++
T Consensus 99 v~~~-~~l~~~~~ 110 (259)
T 2p35_A 99 LYAN-AVFQWVPD 110 (259)
T ss_dssp EEEE-SCGGGSTT
T ss_pred EEEe-CchhhCCC
Confidence 9887 77777754
No 43
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.35 E-value=2.8e-12 Score=94.12 Aligned_cols=83 Identities=16% Similarity=0.159 Sum_probs=63.2
Q ss_pred HHHHHHHHHHc-CCCCCCeEEEEcCCcchhHHHHHhcC-CeEEEEeCChhHHhhhhhhhcccC----eeec-----c---
Q psy1134 36 PLIIQSIVDKG-AIRPTDTVLEIGPGTGNMTVKILEQA-KKVIACEIDPSCKSYFPSLYYFRN----LCLQ-----E--- 101 (149)
Q Consensus 36 ~~~~~~~~~~l-~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~i~~a~~~~~~~~----~~~~-----~--- 101 (149)
.....+++..+ ...++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.++++....+ +... .
T Consensus 31 ~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (257)
T 3f4k_A 31 PEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPF 110 (257)
T ss_dssp HHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSS
T ss_pred HHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCC
Confidence 56677777777 44567899999999999999999984 499999999999999988753221 2111 1
Q ss_pred CCCCCcchhhHHHHhccc
Q psy1134 102 VPTDFDIKTLIDTVLNEI 119 (149)
Q Consensus 102 ~~~~~d~v~~~~~~l~~~ 119 (149)
....||.|++. .+++++
T Consensus 111 ~~~~fD~v~~~-~~l~~~ 127 (257)
T 3f4k_A 111 QNEELDLIWSE-GAIYNI 127 (257)
T ss_dssp CTTCEEEEEEE-SCSCCC
T ss_pred CCCCEEEEEec-ChHhhc
Confidence 23689999887 677766
No 44
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.35 E-value=6.5e-12 Score=91.73 Aligned_cols=71 Identities=14% Similarity=0.075 Sum_probs=54.8
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcccCeeecc-CCC------------CCcchhhHHHH
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYFRNLCLQE-VPT------------DFDIKTLIDTV 115 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~-~~~------------~~d~v~~~~~~ 115 (149)
.++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.++++....++.... ... .||.|++. .+
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~-~~ 133 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMR-TG 133 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEE-SS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEc-ch
Confidence 46789999999999999999999889999999999999999876544444332 111 26677665 66
Q ss_pred hcccc
Q psy1134 116 LNEIN 120 (149)
Q Consensus 116 l~~~~ 120 (149)
+++++
T Consensus 134 ~~~~~ 138 (245)
T 3ggd_A 134 FHHIP 138 (245)
T ss_dssp STTSC
T ss_pred hhcCC
Confidence 77665
No 45
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.35 E-value=3.2e-12 Score=94.64 Aligned_cols=84 Identities=13% Similarity=0.127 Sum_probs=64.0
Q ss_pred CHHHHHHHHHHcC-CCCCCeEEEEcCCcchhHHHHHhc-CCeEEEEeCChhHHhhhhhhhccc----Ceeec-----c--
Q psy1134 35 NPLIIQSIVDKGA-IRPTDTVLEIGPGTGNMTVKILEQ-AKKVIACEIDPSCKSYFPSLYYFR----NLCLQ-----E-- 101 (149)
Q Consensus 35 ~~~~~~~~~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~~~~~~----~~~~~-----~-- 101 (149)
......+++..+. ..++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++.... ++... .
T Consensus 30 ~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 109 (267)
T 3kkz_A 30 SPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP 109 (267)
T ss_dssp CHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred CHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC
Confidence 3566777777776 567889999999999999999998 459999999999999998875322 12221 1
Q ss_pred -CCCCCcchhhHHHHhccc
Q psy1134 102 -VPTDFDIKTLIDTVLNEI 119 (149)
Q Consensus 102 -~~~~~d~v~~~~~~l~~~ 119 (149)
....||.|++. .+++++
T Consensus 110 ~~~~~fD~i~~~-~~~~~~ 127 (267)
T 3kkz_A 110 FRNEELDLIWSE-GAIYNI 127 (267)
T ss_dssp CCTTCEEEEEES-SCGGGT
T ss_pred CCCCCEEEEEEc-CCceec
Confidence 23579999887 666665
No 46
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.34 E-value=2.8e-12 Score=95.84 Aligned_cols=81 Identities=19% Similarity=0.275 Sum_probs=61.5
Q ss_pred HHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhccc----Ceee-------cc--CCCCC
Q psy1134 40 QSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYFR----NLCL-------QE--VPTDF 106 (149)
Q Consensus 40 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~~----~~~~-------~~--~~~~~ 106 (149)
..++..+.. ++.+|||||||+|.++..+++.+.+|+|+|+|+.+++.|++++... ++.. .. ....|
T Consensus 59 ~~~l~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~f 137 (285)
T 4htf_A 59 DRVLAEMGP-QKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPV 137 (285)
T ss_dssp HHHHHHTCS-SCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCE
T ss_pred HHHHHhcCC-CCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCc
Confidence 345555554 3679999999999999999999999999999999999998875321 1111 11 24689
Q ss_pred cchhhHHHHhccccch
Q psy1134 107 DIKTLIDTVLNEINFA 122 (149)
Q Consensus 107 d~v~~~~~~l~~~~~~ 122 (149)
|.|++. .++++++++
T Consensus 138 D~v~~~-~~l~~~~~~ 152 (285)
T 4htf_A 138 DLILFH-AVLEWVADP 152 (285)
T ss_dssp EEEEEE-SCGGGCSCH
T ss_pred eEEEEC-chhhcccCH
Confidence 999987 888888654
No 47
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.34 E-value=1.1e-12 Score=93.68 Aligned_cols=84 Identities=14% Similarity=0.156 Sum_probs=65.0
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc-CCeEEEEeCChhHHhhhhhhhccc----Ceeec-------c-C
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ-AKKVIACEIDPSCKSYFPSLYYFR----NLCLQ-------E-V 102 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~~~~~~----~~~~~-------~-~ 102 (149)
+.+...+.+.++..++ +|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++... ++... . .
T Consensus 30 ~~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (219)
T 3dlc_A 30 PIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIE 108 (219)
T ss_dssp HHHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSC
T ss_pred HHHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCC
Confidence 5677888888876655 9999999999999999998 679999999999999998874321 12211 1 2
Q ss_pred CCCCcchhhHHHHhccccc
Q psy1134 103 PTDFDIKTLIDTVLNEINF 121 (149)
Q Consensus 103 ~~~~d~v~~~~~~l~~~~~ 121 (149)
...||.|++. .+++++++
T Consensus 109 ~~~~D~v~~~-~~l~~~~~ 126 (219)
T 3dlc_A 109 DNYADLIVSR-GSVFFWED 126 (219)
T ss_dssp TTCEEEEEEE-SCGGGCSC
T ss_pred cccccEEEEC-chHhhccC
Confidence 3679999887 77777754
No 48
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.34 E-value=2.4e-12 Score=95.50 Aligned_cols=100 Identities=19% Similarity=0.236 Sum_probs=73.8
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc-C--CeEEEEeCChh------HHhhhhhhhcc----cCeeecc-
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ-A--KKVIACEIDPS------CKSYFPSLYYF----RNLCLQE- 101 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~--~~v~giD~s~~------~i~~a~~~~~~----~~~~~~~- 101 (149)
......+++.+...++.+|||||||+|.++..+++. + .+|+|+|+|+. +++.+++++.. .++....
T Consensus 29 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~ 108 (275)
T 3bkx_A 29 TAHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFN 108 (275)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECS
T ss_pred HHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEEC
Confidence 456677788888888999999999999999999988 4 79999999997 89998877532 1121111
Q ss_pred ----------CCCCCcchhhHHHHhccccchhHhhccCChhhHHHHHHhhhccC
Q psy1134 102 ----------VPTDFDIKTLIDTVLNEINFADKRARTMDLDDFVLLLATFNKHG 145 (149)
Q Consensus 102 ----------~~~~~d~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (149)
....||.|++. .++++++.+ ..++..+..+.+.|
T Consensus 109 d~~~~~~~~~~~~~fD~v~~~-~~l~~~~~~---------~~~~~~~~~l~~~g 152 (275)
T 3bkx_A 109 TNLSDDLGPIADQHFDRVVLA-HSLWYFASA---------NALALLFKNMAAVC 152 (275)
T ss_dssp CCTTTCCGGGTTCCCSEEEEE-SCGGGSSCH---------HHHHHHHHHHTTTC
T ss_pred ChhhhccCCCCCCCEEEEEEc-cchhhCCCH---------HHHHHHHHHHhCCC
Confidence 12579999887 788887764 23566666666633
No 49
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.33 E-value=2.4e-12 Score=89.33 Aligned_cols=59 Identities=19% Similarity=0.303 Sum_probs=52.5
Q ss_pred CHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhc
Q psy1134 35 NPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 35 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~ 93 (149)
.+.+...+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~ 70 (178)
T 3hm2_A 10 KQHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAI 70 (178)
T ss_dssp HHHHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHH
Confidence 3667788888888888889999999999999999988 6799999999999999998753
No 50
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.33 E-value=1.1e-12 Score=95.22 Aligned_cols=82 Identities=7% Similarity=0.073 Sum_probs=60.0
Q ss_pred HHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhc---c--cCeeeccCCCCCcchhhHH
Q psy1134 39 IQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYY---F--RNLCLQEVPTDFDIKTLID 113 (149)
Q Consensus 39 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~---~--~~~~~~~~~~~~d~v~~~~ 113 (149)
...+...+ .++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++.. + .++........||.|++..
T Consensus 31 ~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~ 108 (239)
T 3bxo_A 31 ADLVRSRT--PEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRLPDATLHQGDMRDFRLGRKFSAVVSMF 108 (239)
T ss_dssp HHHHHHHC--TTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCCSSCEEEEEECT
T ss_pred HHHHHHhc--CCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcccCCCCcEEEEcC
Confidence 33343434 467899999999999999999987799999999999999987642 1 1111111346899998654
Q ss_pred HHhccccch
Q psy1134 114 TVLNEINFA 122 (149)
Q Consensus 114 ~~l~~~~~~ 122 (149)
+++++++.+
T Consensus 109 ~~~~~~~~~ 117 (239)
T 3bxo_A 109 SSVGYLKTT 117 (239)
T ss_dssp TGGGGCCSH
T ss_pred chHhhcCCH
Confidence 788887653
No 51
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.32 E-value=8.9e-13 Score=94.62 Aligned_cols=79 Identities=16% Similarity=0.105 Sum_probs=58.5
Q ss_pred HHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcc----cCeeec-----cCCCCCcc
Q psy1134 38 IIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYF----RNLCLQ-----EVPTDFDI 108 (149)
Q Consensus 38 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~----~~~~~~-----~~~~~~d~ 108 (149)
....++..+...++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++... .+.... .....||.
T Consensus 40 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~ 119 (227)
T 3e8s_A 40 TDQAILLAILGRQPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDL 119 (227)
T ss_dssp HHHHHHHHHHHTCCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEE
T ss_pred ccHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccE
Confidence 345566666656778999999999999999999989999999999999999887211 111111 12245999
Q ss_pred hhhHHHHhc
Q psy1134 109 KTLIDTVLN 117 (149)
Q Consensus 109 v~~~~~~l~ 117 (149)
|++. .+++
T Consensus 120 v~~~-~~l~ 127 (227)
T 3e8s_A 120 ICAN-FALL 127 (227)
T ss_dssp EEEE-SCCC
T ss_pred EEEC-chhh
Confidence 9876 5555
No 52
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.32 E-value=4.4e-12 Score=90.59 Aligned_cols=88 Identities=19% Similarity=0.247 Sum_probs=69.9
Q ss_pred ccCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcc---cCeeecc--------
Q psy1134 33 LKNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYF---RNLCLQE-------- 101 (149)
Q Consensus 33 ~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~---~~~~~~~-------- 101 (149)
...+.....+...+...++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++.. .++....
T Consensus 60 ~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 139 (210)
T 3lbf_A 60 ISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQ 139 (210)
T ss_dssp ECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG
T ss_pred eCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCc
Confidence 35688889999999888899999999999999999999999999999999999999987532 2232221
Q ss_pred CCCCCcchhhHHHHhccccc
Q psy1134 102 VPTDFDIKTLIDTVLNEINF 121 (149)
Q Consensus 102 ~~~~~d~v~~~~~~l~~~~~ 121 (149)
....||.|++. ..+++++.
T Consensus 140 ~~~~~D~i~~~-~~~~~~~~ 158 (210)
T 3lbf_A 140 ARAPFDAIIVT-AAPPEIPT 158 (210)
T ss_dssp GGCCEEEEEES-SBCSSCCT
T ss_pred cCCCccEEEEc-cchhhhhH
Confidence 12578988876 56666653
No 53
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.32 E-value=4.5e-12 Score=89.37 Aligned_cols=79 Identities=14% Similarity=0.205 Sum_probs=60.8
Q ss_pred HHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhccc---Ceeec-------cCCCCCcchh
Q psy1134 41 SIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYFR---NLCLQ-------EVPTDFDIKT 110 (149)
Q Consensus 41 ~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~~---~~~~~-------~~~~~~d~v~ 110 (149)
.+.+.+...++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++.... ++... .....||.|+
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~ 102 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFIL 102 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCCEEEEE
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCCceEEE
Confidence 4556666667889999999999999999999889999999999999998764321 22211 1246889998
Q ss_pred hHHHHhcccc
Q psy1134 111 LIDTVLNEIN 120 (149)
Q Consensus 111 ~~~~~l~~~~ 120 (149)
+. .++++++
T Consensus 103 ~~-~~l~~~~ 111 (199)
T 2xvm_A 103 ST-VVLMFLE 111 (199)
T ss_dssp EE-SCGGGSC
T ss_pred Ec-chhhhCC
Confidence 77 6777765
No 54
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.31 E-value=3.4e-12 Score=92.68 Aligned_cols=86 Identities=20% Similarity=0.155 Sum_probs=63.8
Q ss_pred HHHHHHHHHHcCCC--CCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhccc-------Ceeec--cCCC
Q psy1134 36 PLIIQSIVDKGAIR--PTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYFR-------NLCLQ--EVPT 104 (149)
Q Consensus 36 ~~~~~~~~~~l~~~--~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~~-------~~~~~--~~~~ 104 (149)
..+.+.+.+.+... ++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.++++.... ..+.. ..+.
T Consensus 21 ~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~ 100 (246)
T 1y8c_A 21 KKWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINR 100 (246)
T ss_dssp HHHHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSC
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccC
Confidence 44555555555433 6789999999999999999999899999999999999998875321 11111 1336
Q ss_pred CCcchhhHHHHhccccc
Q psy1134 105 DFDIKTLIDTVLNEINF 121 (149)
Q Consensus 105 ~~d~v~~~~~~l~~~~~ 121 (149)
.||.|++..+++++++.
T Consensus 101 ~fD~v~~~~~~l~~~~~ 117 (246)
T 1y8c_A 101 KFDLITCCLDSTNYIID 117 (246)
T ss_dssp CEEEEEECTTGGGGCCS
T ss_pred CceEEEEcCccccccCC
Confidence 89999887338888854
No 55
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.31 E-value=3.6e-12 Score=93.37 Aligned_cols=82 Identities=20% Similarity=0.242 Sum_probs=59.8
Q ss_pred HHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcccC--eee-------ccCCCCCc
Q psy1134 37 LIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYFRN--LCL-------QEVPTDFD 107 (149)
Q Consensus 37 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~~~--~~~-------~~~~~~~d 107 (149)
.+...++......++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.|+++....+ +.. ...+..||
T Consensus 28 ~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD 107 (252)
T 1wzn_A 28 DFVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEFD 107 (252)
T ss_dssp HHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCEE
T ss_pred HHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCcc
Confidence 455566666665677899999999999999999999999999999999999988753211 111 11345789
Q ss_pred chhhHHHHhcc
Q psy1134 108 IKTLIDTVLNE 118 (149)
Q Consensus 108 ~v~~~~~~l~~ 118 (149)
.|++....+.+
T Consensus 108 ~v~~~~~~~~~ 118 (252)
T 1wzn_A 108 AVTMFFSTIMY 118 (252)
T ss_dssp EEEECSSGGGG
T ss_pred EEEEcCCchhc
Confidence 88764333333
No 56
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=99.31 E-value=3.1e-12 Score=94.89 Aligned_cols=62 Identities=23% Similarity=0.377 Sum_probs=56.0
Q ss_pred cccccCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCe--EEEEeCChhHHhhhhhhhc
Q psy1134 30 QHILKNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKK--VIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 30 ~~~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~--v~giD~s~~~i~~a~~~~~ 93 (149)
|+|..++.+.+++++.+...++.+|||||||+|.+|. ++ .+.+ |+|+|+|+.|++.++++..
T Consensus 1 QnfL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~ 64 (252)
T 1qyr_A 1 QNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPF 64 (252)
T ss_dssp CCEECCHHHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTT
T ss_pred CCCcCCHHHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhc
Confidence 6889999999999999998888999999999999999 65 4567 9999999999999988753
No 57
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.31 E-value=3.4e-12 Score=96.76 Aligned_cols=79 Identities=11% Similarity=0.072 Sum_probs=61.3
Q ss_pred HHHHHHcC-CCCCCeEEEEcCCcchhHHHHHhc-CCeEEEEeCChhHHhhhhhhhccc----Ceeec-----c---CCCC
Q psy1134 40 QSIVDKGA-IRPTDTVLEIGPGTGNMTVKILEQ-AKKVIACEIDPSCKSYFPSLYYFR----NLCLQ-----E---VPTD 105 (149)
Q Consensus 40 ~~~~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~~~~~~----~~~~~-----~---~~~~ 105 (149)
+.+++.+. ..++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++.... ++... . ....
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 185 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGA 185 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTC
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCC
Confidence 44666676 667889999999999999999998 899999999999999998875322 12221 1 1368
Q ss_pred CcchhhHHHHhccc
Q psy1134 106 FDIKTLIDTVLNEI 119 (149)
Q Consensus 106 ~d~v~~~~~~l~~~ 119 (149)
||.|++. .+++++
T Consensus 186 fD~V~~~-~~l~~~ 198 (312)
T 3vc1_A 186 VTASWNN-ESTMYV 198 (312)
T ss_dssp EEEEEEE-SCGGGS
T ss_pred EeEEEEC-CchhhC
Confidence 9999887 777766
No 58
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.30 E-value=4e-12 Score=95.41 Aligned_cols=85 Identities=9% Similarity=0.071 Sum_probs=66.1
Q ss_pred HHHHHHHHHHc----CCCCCCeEEEEcCCcchhHHHHHhc-CCeEEEEeCChhHHhhhhhhhcc----cCeeec------
Q psy1134 36 PLIIQSIVDKG----AIRPTDTVLEIGPGTGNMTVKILEQ-AKKVIACEIDPSCKSYFPSLYYF----RNLCLQ------ 100 (149)
Q Consensus 36 ~~~~~~~~~~l----~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~~~~~----~~~~~~------ 100 (149)
......++..+ ...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++... .++...
T Consensus 64 ~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 143 (297)
T 2o57_A 64 LRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLE 143 (297)
T ss_dssp HHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTS
T ss_pred HHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCccc
Confidence 44667777777 6678899999999999999999988 88999999999999999876422 112211
Q ss_pred -cC-CCCCcchhhHHHHhccccc
Q psy1134 101 -EV-PTDFDIKTLIDTVLNEINF 121 (149)
Q Consensus 101 -~~-~~~~d~v~~~~~~l~~~~~ 121 (149)
.. ...||.|++. .+++++++
T Consensus 144 ~~~~~~~fD~v~~~-~~l~~~~~ 165 (297)
T 2o57_A 144 IPCEDNSYDFIWSQ-DAFLHSPD 165 (297)
T ss_dssp CSSCTTCEEEEEEE-SCGGGCSC
T ss_pred CCCCCCCEeEEEec-chhhhcCC
Confidence 11 3579999887 78888775
No 59
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.30 E-value=2.7e-12 Score=89.99 Aligned_cols=55 Identities=16% Similarity=0.205 Sum_probs=45.5
Q ss_pred HHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhc
Q psy1134 38 IIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 38 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~ 93 (149)
+...++.. ...++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.|+++..
T Consensus 11 ~~~~~l~~-~~~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~ 65 (185)
T 3mti_A 11 MSHDFLAE-VLDDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLS 65 (185)
T ss_dssp HHHHHHHT-TCCTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHH-hCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHH
Confidence 33444333 33478899999999999999999999999999999999999998764
No 60
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.30 E-value=4.1e-12 Score=99.85 Aligned_cols=100 Identities=12% Similarity=0.130 Sum_probs=73.5
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhc-ccCeee-----c--c-CCCCC
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYY-FRNLCL-----Q--E-VPTDF 106 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~-~~~~~~-----~--~-~~~~~ 106 (149)
..+.+.+++.+...++.+|||||||+|.++..+++.+.+|+|+|+|+.|++.|+++.. ...... . . ....|
T Consensus 93 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~f 172 (416)
T 4e2x_A 93 AMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPA 172 (416)
T ss_dssp HHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCE
T ss_pred HHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCE
Confidence 4466677777777788899999999999999999999999999999999999987621 111000 0 0 13789
Q ss_pred cchhhHHHHhccccchhHhhccCChhhHHHHHHhhhccC
Q psy1134 107 DIKTLIDTVLNEINFADKRARTMDLDDFVLLLATFNKHG 145 (149)
Q Consensus 107 d~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (149)
|.|++. .+++++++ ...+++.+...-+.|
T Consensus 173 D~I~~~-~vl~h~~d---------~~~~l~~~~r~Lkpg 201 (416)
T 4e2x_A 173 NVIYAA-NTLCHIPY---------VQSVLEGVDALLAPD 201 (416)
T ss_dssp EEEEEE-SCGGGCTT---------HHHHHHHHHHHEEEE
T ss_pred EEEEEC-ChHHhcCC---------HHHHHHHHHHHcCCC
Confidence 999988 89998864 445555555444433
No 61
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.30 E-value=5e-12 Score=92.88 Aligned_cols=85 Identities=15% Similarity=0.194 Sum_probs=62.1
Q ss_pred HHHHHHHHHHc-----CCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhc--ccCeeec-------c
Q psy1134 36 PLIIQSIVDKG-----AIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYY--FRNLCLQ-------E 101 (149)
Q Consensus 36 ~~~~~~~~~~l-----~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~--~~~~~~~-------~ 101 (149)
......+.+.+ ...++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.+++++. ..++... .
T Consensus 20 ~~~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~ 99 (263)
T 2yqz_A 20 PEVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIP 99 (263)
T ss_dssp HHHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCC
T ss_pred hHHHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCC
Confidence 34444444444 44578899999999999999999999999999999999999988741 1122211 1
Q ss_pred -CCCCCcchhhHHHHhccccc
Q psy1134 102 -VPTDFDIKTLIDTVLNEINF 121 (149)
Q Consensus 102 -~~~~~d~v~~~~~~l~~~~~ 121 (149)
....||.|++. .+++++++
T Consensus 100 ~~~~~fD~v~~~-~~l~~~~~ 119 (263)
T 2yqz_A 100 LPDESVHGVIVV-HLWHLVPD 119 (263)
T ss_dssp SCTTCEEEEEEE-SCGGGCTT
T ss_pred CCCCCeeEEEEC-CchhhcCC
Confidence 23579999887 77777764
No 62
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.30 E-value=6.3e-12 Score=91.77 Aligned_cols=85 Identities=18% Similarity=0.220 Sum_probs=65.1
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcc---cCeeec-------cC-CC
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYF---RNLCLQ-------EV-PT 104 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~---~~~~~~-------~~-~~ 104 (149)
..-...++..+.+.++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++... .++... .. ..
T Consensus 7 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 86 (239)
T 1xxl_A 7 HHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDD 86 (239)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTT
T ss_pred CCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCC
Confidence 33445567778888899999999999999999999988999999999999999876421 122211 12 25
Q ss_pred CCcchhhHHHHhccccc
Q psy1134 105 DFDIKTLIDTVLNEINF 121 (149)
Q Consensus 105 ~~d~v~~~~~~l~~~~~ 121 (149)
.||.|++. .+++++++
T Consensus 87 ~fD~v~~~-~~l~~~~~ 102 (239)
T 1xxl_A 87 SFDIITCR-YAAHHFSD 102 (239)
T ss_dssp CEEEEEEE-SCGGGCSC
T ss_pred cEEEEEEC-CchhhccC
Confidence 79999877 67777764
No 63
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.29 E-value=2.9e-12 Score=95.73 Aligned_cols=78 Identities=17% Similarity=0.229 Sum_probs=59.6
Q ss_pred HHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhccc--Ceeec-------cCCCCCcchhhHH
Q psy1134 43 VDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYFR--NLCLQ-------EVPTDFDIKTLID 113 (149)
Q Consensus 43 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~~--~~~~~-------~~~~~~d~v~~~~ 113 (149)
++.+...++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++.... ++... .....||.|++.
T Consensus 113 ~~~~~~~~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~i~~~- 191 (286)
T 3m70_A 113 VDAAKIISPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENYDFIVST- 191 (286)
T ss_dssp HHHHHHSCSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCEEEEEEC-
T ss_pred HHHhhccCCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCCccEEEEc-
Confidence 33343346889999999999999999999899999999999999998875432 22211 124689999887
Q ss_pred HHhccccc
Q psy1134 114 TVLNEINF 121 (149)
Q Consensus 114 ~~l~~~~~ 121 (149)
.++++++.
T Consensus 192 ~~~~~~~~ 199 (286)
T 3m70_A 192 VVFMFLNR 199 (286)
T ss_dssp SSGGGSCG
T ss_pred cchhhCCH
Confidence 77777754
No 64
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.27 E-value=1.9e-12 Score=93.50 Aligned_cols=79 Identities=16% Similarity=0.264 Sum_probs=60.9
Q ss_pred HHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcccCe--------eecc--------CCCC
Q psy1134 42 IVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYFRNL--------CLQE--------VPTD 105 (149)
Q Consensus 42 ~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~~~~--------~~~~--------~~~~ 105 (149)
+.+.++ ++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++....+. .... ....
T Consensus 24 ~~~~~~--~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 101 (235)
T 3sm3_A 24 IHNYLQ--EDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSS 101 (235)
T ss_dssp HHHHCC--TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTC
T ss_pred HHHhCC--CCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCc
Confidence 334444 678999999999999999999999999999999999999987543222 1111 2357
Q ss_pred CcchhhHHHHhccccchh
Q psy1134 106 FDIKTLIDTVLNEINFAD 123 (149)
Q Consensus 106 ~d~v~~~~~~l~~~~~~~ 123 (149)
||.|++. .++++++++.
T Consensus 102 ~D~v~~~-~~l~~~~~~~ 118 (235)
T 3sm3_A 102 FDFAVMQ-AFLTSVPDPK 118 (235)
T ss_dssp EEEEEEE-SCGGGCCCHH
T ss_pred eeEEEEc-chhhcCCCHH
Confidence 9999887 8888887654
No 65
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.27 E-value=1.3e-11 Score=89.57 Aligned_cols=83 Identities=18% Similarity=0.278 Sum_probs=63.3
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhccc--Ceee-------ccCCCCC
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYFR--NLCL-------QEVPTDF 106 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~~--~~~~-------~~~~~~~ 106 (149)
..+.+.+.+.++ ++.+|||+|||+|.++..+++. .+|+|+|+|+.+++.|+++.... ++.. ...+..|
T Consensus 21 ~~~~~~~~~~~~--~~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~f 97 (243)
T 3d2l_A 21 PEWVAWVLEQVE--PGKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPV 97 (243)
T ss_dssp HHHHHHHHHHSC--TTCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCE
T ss_pred HHHHHHHHHHcC--CCCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCc
Confidence 567777877776 4689999999999999999988 89999999999999998875321 1111 1134689
Q ss_pred cchhhHHHHhccccc
Q psy1134 107 DIKTLIDTVLNEINF 121 (149)
Q Consensus 107 d~v~~~~~~l~~~~~ 121 (149)
|.|++..++++++..
T Consensus 98 D~v~~~~~~~~~~~~ 112 (243)
T 3d2l_A 98 DAITILCDSLNYLQT 112 (243)
T ss_dssp EEEEECTTGGGGCCS
T ss_pred CEEEEeCCchhhcCC
Confidence 999876457777754
No 66
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.26 E-value=5.1e-12 Score=90.64 Aligned_cols=81 Identities=16% Similarity=0.205 Sum_probs=62.6
Q ss_pred HHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC---CeEEEEeCChhHHhhhhhhhcc---cCeeecc--------CCCC
Q psy1134 40 QSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA---KKVIACEIDPSCKSYFPSLYYF---RNLCLQE--------VPTD 105 (149)
Q Consensus 40 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~giD~s~~~i~~a~~~~~~---~~~~~~~--------~~~~ 105 (149)
..+++.+...++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.+++++.. .++.... ....
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 106 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNT 106 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSC
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCC
Confidence 566777777788999999999999999999885 7999999999999999887522 1222211 2257
Q ss_pred CcchhhHHHHhccccc
Q psy1134 106 FDIKTLIDTVLNEINF 121 (149)
Q Consensus 106 ~d~v~~~~~~l~~~~~ 121 (149)
||.|++. .+++++++
T Consensus 107 fD~v~~~-~~l~~~~~ 121 (219)
T 3dh0_A 107 VDFIFMA-FTFHELSE 121 (219)
T ss_dssp EEEEEEE-SCGGGCSS
T ss_pred eeEEEee-hhhhhcCC
Confidence 9999887 77777754
No 67
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.26 E-value=3.4e-12 Score=90.87 Aligned_cols=99 Identities=12% Similarity=0.165 Sum_probs=70.8
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhcccC----eee-----ccCCC
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYYFRN----LCL-----QEVPT 104 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~~~~----~~~-----~~~~~ 104 (149)
..+...++..++ ++.+|||+|||+|.++..++.. ..+|+|+|+|+.|++.+++++...+ ... ...+.
T Consensus 37 d~fY~~~~~~l~--~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~~~~~ 114 (200)
T 3fzg_A 37 NDFYTYVFGNIK--HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESDVYKG 114 (200)
T ss_dssp HHHHHHHHHHSC--CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHHHTTS
T ss_pred HHHHHHHHhhcC--CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEecccccCCCC
Confidence 345566666675 4779999999999999999766 5699999999999999998864322 211 12557
Q ss_pred CCcchhhHHHHhccccchhHhhccCChhhHHHHHHhhhccC
Q psy1134 105 DFDIKTLIDTVLNEINFADKRARTMDLDDFVLLLATFNKHG 145 (149)
Q Consensus 105 ~~d~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (149)
.||.|... ++++.+ ...+. -..+++..+++.|
T Consensus 115 ~~DvVLa~-k~LHlL-~~~~~-------al~~v~~~L~pgg 146 (200)
T 3fzg_A 115 TYDVVFLL-KMLPVL-KQQDV-------NILDFLQLFHTQN 146 (200)
T ss_dssp EEEEEEEE-TCHHHH-HHTTC-------CHHHHHHTCEEEE
T ss_pred CcChhhHh-hHHHhh-hhhHH-------HHHHHHHHhCCCC
Confidence 89999888 888877 22111 1225666666665
No 68
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.26 E-value=1.2e-11 Score=90.56 Aligned_cols=85 Identities=12% Similarity=-0.015 Sum_probs=64.4
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc-CCeEEEEeCChhHHhhhhhhhcc-cCee-----ec--c-CCCC
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ-AKKVIACEIDPSCKSYFPSLYYF-RNLC-----LQ--E-VPTD 105 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~~~~~-~~~~-----~~--~-~~~~ 105 (149)
..+...+++.+...++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.++++... .++. .. . ....
T Consensus 79 ~~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~ 158 (254)
T 1xtp_A 79 IEGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNT 158 (254)
T ss_dssp HHHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSC
T ss_pred HHHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCC
Confidence 345566777777677889999999999999999888 56799999999999999887532 1111 11 1 2358
Q ss_pred CcchhhHHHHhccccc
Q psy1134 106 FDIKTLIDTVLNEINF 121 (149)
Q Consensus 106 ~d~v~~~~~~l~~~~~ 121 (149)
||.|++. .++++++.
T Consensus 159 fD~v~~~-~~l~~~~~ 173 (254)
T 1xtp_A 159 YDLIVIQ-WTAIYLTD 173 (254)
T ss_dssp EEEEEEE-SCGGGSCH
T ss_pred eEEEEEc-chhhhCCH
Confidence 9999887 78888764
No 69
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.26 E-value=2e-11 Score=88.41 Aligned_cols=90 Identities=23% Similarity=0.271 Sum_probs=69.9
Q ss_pred ccccccCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhccc-Ceeec-----c-
Q psy1134 29 GQHILKNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYFR-NLCLQ-----E- 101 (149)
Q Consensus 29 g~~~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~~-~~~~~-----~- 101 (149)
++. +..+.....+.+.+...++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++.... ++... .
T Consensus 50 ~~~-~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~ 128 (231)
T 1vbf_A 50 GIN-TTALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLG 128 (231)
T ss_dssp TEE-ECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGC
T ss_pred CCc-cCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccc
Confidence 444 356888899999998888899999999999999999998899999999999999998875322 22211 1
Q ss_pred --CCCCCcchhhHHHHhcccc
Q psy1134 102 --VPTDFDIKTLIDTVLNEIN 120 (149)
Q Consensus 102 --~~~~~d~v~~~~~~l~~~~ 120 (149)
....||.|++. .++++++
T Consensus 129 ~~~~~~fD~v~~~-~~~~~~~ 148 (231)
T 1vbf_A 129 YEEEKPYDRVVVW-ATAPTLL 148 (231)
T ss_dssp CGGGCCEEEEEES-SBBSSCC
T ss_pred cccCCCccEEEEC-CcHHHHH
Confidence 23578888766 6666554
No 70
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.25 E-value=1.4e-11 Score=91.03 Aligned_cols=72 Identities=13% Similarity=0.040 Sum_probs=53.6
Q ss_pred HHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcc----cCeeeccC-CCCCcchhhH
Q psy1134 39 IQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYF----RNLCLQEV-PTDFDIKTLI 112 (149)
Q Consensus 39 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~----~~~~~~~~-~~~~d~v~~~ 112 (149)
.+.+.+.++ ++.+|||+|||+|.++..+++.+.+|+|+|+|+.|++.++++... .+...... ...||.|++.
T Consensus 45 ~~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 121 (260)
T 2avn_A 45 GSFLEEYLK--NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLAL 121 (260)
T ss_dssp HHHHHHHCC--SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEEC
T ss_pred HHHHHHhcC--CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEc
Confidence 333444444 678999999999999999999989999999999999999887541 11111112 3578998876
No 71
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.25 E-value=2e-12 Score=89.47 Aligned_cols=79 Identities=11% Similarity=0.078 Sum_probs=59.6
Q ss_pred HHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhh---cccCeeeccCCCCCcchhhHHHHhcc
Q psy1134 42 IVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLY---YFRNLCLQEVPTDFDIKTLIDTVLNE 118 (149)
Q Consensus 42 ~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~---~~~~~~~~~~~~~~d~v~~~~~~l~~ 118 (149)
+++.+...++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++. .+...+.......||.|++. .++++
T Consensus 9 ~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~v~~~~~d~~~~~~~~D~v~~~-~~l~~ 87 (170)
T 3i9f_A 9 YLPNIFEGKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEKFDSVITLSDPKEIPDNSVDFILFA-NSFHD 87 (170)
T ss_dssp THHHHHSSCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHHCTTSEEESSGGGSCTTCEEEEEEE-SCSTT
T ss_pred HHHhcCcCCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHhCCCcEEEeCCCCCCCCceEEEEEc-cchhc
Confidence 344455567889999999999999999998669999999999999998762 22222211134689999887 77777
Q ss_pred ccc
Q psy1134 119 INF 121 (149)
Q Consensus 119 ~~~ 121 (149)
++.
T Consensus 88 ~~~ 90 (170)
T 3i9f_A 88 MDD 90 (170)
T ss_dssp CSC
T ss_pred ccC
Confidence 754
No 72
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.25 E-value=1.8e-11 Score=87.25 Aligned_cols=85 Identities=18% Similarity=0.110 Sum_probs=62.4
Q ss_pred cccccccccCHHHHHHHHHHc---CCCCCCeEEEEcCCcchhHHHHHhcC-CeEEEEeCChhHHhhhhhhhccc--Ceee
Q psy1134 26 KDFGQHILKNPLIIQSIVDKG---AIRPTDTVLEIGPGTGNMTVKILEQA-KKVIACEIDPSCKSYFPSLYYFR--NLCL 99 (149)
Q Consensus 26 ~~~g~~~~~~~~~~~~~~~~l---~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~i~~a~~~~~~~--~~~~ 99 (149)
..+++ +..++.....++..+ ...++++|||+|||+|.++..+++.+ .+|+|+|+|+.+++.++++.... +...
T Consensus 23 ~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~ 101 (207)
T 1wy7_A 23 VWLEQ-YRTPGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKV 101 (207)
T ss_dssp GGGTC-CCCCHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEE
T ss_pred cceee-ecCchHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEE
Confidence 45666 456777777776554 34568899999999999999999885 47999999999999999876432 2222
Q ss_pred c-----cCCCCCcchhh
Q psy1134 100 Q-----EVPTDFDIKTL 111 (149)
Q Consensus 100 ~-----~~~~~~d~v~~ 111 (149)
. ..+..||.|++
T Consensus 102 ~~~d~~~~~~~~D~v~~ 118 (207)
T 1wy7_A 102 FIGDVSEFNSRVDIVIM 118 (207)
T ss_dssp EESCGGGCCCCCSEEEE
T ss_pred EECchHHcCCCCCEEEE
Confidence 1 13457777765
No 73
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.24 E-value=2e-11 Score=91.87 Aligned_cols=82 Identities=11% Similarity=0.205 Sum_probs=61.3
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHh---cCCeEEEEeCChhHHhhhhhhhcc-----cCeeec-------
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILE---QAKKVIACEIDPSCKSYFPSLYYF-----RNLCLQ------- 100 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~giD~s~~~i~~a~~~~~~-----~~~~~~------- 100 (149)
+.+...+..... .++.+|||+|||+|.++..+++ .+.+|+|+|+|+.+++.|+++... .++...
T Consensus 23 ~~~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~ 101 (299)
T 3g5t_A 23 SDFYKMIDEYHD-GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDF 101 (299)
T ss_dssp HHHHHHHHHHCC-SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCC
T ss_pred HHHHHHHHHHhc-CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhC
Confidence 556666666654 4788999999999999999995 478999999999999999886422 122221
Q ss_pred c-CC------CCCcchhhHHHHhccc
Q psy1134 101 E-VP------TDFDIKTLIDTVLNEI 119 (149)
Q Consensus 101 ~-~~------~~~d~v~~~~~~l~~~ 119 (149)
. .. ..||.|++. .+++++
T Consensus 102 ~~~~~~~~~~~~fD~V~~~-~~l~~~ 126 (299)
T 3g5t_A 102 KFLGADSVDKQKIDMITAV-ECAHWF 126 (299)
T ss_dssp GGGCTTTTTSSCEEEEEEE-SCGGGS
T ss_pred CccccccccCCCeeEEeHh-hHHHHh
Confidence 1 12 579999887 677766
No 74
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.24 E-value=7.7e-12 Score=90.87 Aligned_cols=79 Identities=19% Similarity=0.226 Sum_probs=58.7
Q ss_pred HHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcc----cCeeecc-------CCCCCcc
Q psy1134 40 QSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYF----RNLCLQE-------VPTDFDI 108 (149)
Q Consensus 40 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~----~~~~~~~-------~~~~~d~ 108 (149)
..++..... ++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|+++... .++.... ....||.
T Consensus 57 ~~~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~ 135 (235)
T 3lcc_A 57 VHLVDTSSL-PLGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDL 135 (235)
T ss_dssp HHHHHTTCS-CCEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEE
T ss_pred HHHHHhcCC-CCCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeE
Confidence 334444443 345999999999999999998888999999999999999887643 1122211 2357999
Q ss_pred hhhHHHHhcccc
Q psy1134 109 KTLIDTVLNEIN 120 (149)
Q Consensus 109 v~~~~~~l~~~~ 120 (149)
|++. .++++++
T Consensus 136 v~~~-~~l~~~~ 146 (235)
T 3lcc_A 136 IFDY-VFFCAIE 146 (235)
T ss_dssp EEEE-SSTTTSC
T ss_pred EEEC-hhhhcCC
Confidence 9877 7777775
No 75
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.24 E-value=3.1e-11 Score=86.54 Aligned_cols=60 Identities=15% Similarity=0.159 Sum_probs=54.4
Q ss_pred ccCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 33 LKNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 33 ~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
...+.+...++..+...++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|+++.
T Consensus 38 ~~~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~ 97 (204)
T 3njr_A 38 ITKSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNI 97 (204)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 355778888889998888999999999999999999999899999999999999999875
No 76
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.23 E-value=2.6e-11 Score=87.88 Aligned_cols=75 Identities=19% Similarity=0.123 Sum_probs=54.2
Q ss_pred HHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhh---cc--cCe-eeccC--CCCCcc
Q psy1134 37 LIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLY---YF--RNL-CLQEV--PTDFDI 108 (149)
Q Consensus 37 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~---~~--~~~-~~~~~--~~~~d~ 108 (149)
.+...++.... .++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++. .+ .+. ..... ...||.
T Consensus 36 ~l~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~ 114 (226)
T 3m33_A 36 LTFDLWLSRLL-TPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGL 114 (226)
T ss_dssp HHHHHHHHHHC-CTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEE
T ss_pred HHHHHHHHhcC-CCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEE
Confidence 34444444333 46789999999999999999999999999999999999998872 11 122 11111 457888
Q ss_pred hhhH
Q psy1134 109 KTLI 112 (149)
Q Consensus 109 v~~~ 112 (149)
|++.
T Consensus 115 v~~~ 118 (226)
T 3m33_A 115 IVSR 118 (226)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 8764
No 77
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.23 E-value=9.3e-12 Score=91.15 Aligned_cols=58 Identities=14% Similarity=0.108 Sum_probs=47.9
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc-CCeEEEEeCChhHHhhhhhhhcc
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ-AKKVIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~~~~~ 94 (149)
..+.+.+.+.+. .+|.+|||||||+|..+..+++. +.+|+|||+|+.|++.|+++...
T Consensus 47 ~~~m~~~a~~~~-~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~ 105 (236)
T 3orh_A 47 TPYMHALAAAAS-SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPR 105 (236)
T ss_dssp HHHHHHHHHHHT-TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGG
T ss_pred HHHHHHHHHhhc-cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhh
Confidence 455555655554 47889999999999999999887 57899999999999999987643
No 78
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.23 E-value=7e-12 Score=95.19 Aligned_cols=89 Identities=16% Similarity=0.087 Sum_probs=60.1
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-CCeEEEEeCChhHHhhhhhhhcccC---------ee-----e------c-----cCC
Q psy1134 50 PTDTVLEIGPGTGNMTVKILEQ-AKKVIACEIDPSCKSYFPSLYYFRN---------LC-----L------Q-----EVP 103 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~~~~~~~---------~~-----~------~-----~~~ 103 (149)
++.+|||||||+|..+..+++. +.+|+|+|+|+.|++.|++++...+ .. . . ...
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 4779999999999877666655 5799999999999999998753211 10 1 0 123
Q ss_pred CCCcchhhHHHHhccccchhHhhccCChhhHHHHHHhhhccC
Q psy1134 104 TDFDIKTLIDTVLNEINFADKRARTMDLDDFVLLLATFNKHG 145 (149)
Q Consensus 104 ~~~d~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (149)
..||.|+|. .+++++..... ...+++.+...-+.|
T Consensus 128 ~~FD~V~~~-~~lhy~~~~~~------~~~~l~~~~r~LkpG 162 (302)
T 2vdw_A 128 GKFNIIDWQ-FAIHYSFHPRH------YATVMNNLSELTASG 162 (302)
T ss_dssp SCEEEEEEE-SCGGGTCSTTT------HHHHHHHHHHHEEEE
T ss_pred CCeeEEEEC-chHHHhCCHHH------HHHHHHHHHHHcCCC
Confidence 689999887 57776544321 245566555555544
No 79
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.21 E-value=1.5e-11 Score=87.85 Aligned_cols=77 Identities=17% Similarity=0.178 Sum_probs=56.0
Q ss_pred HHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCC-eEEEEeCChhHHhhhhhhh---cccCeeec--c-CCCCCcchhhH
Q psy1134 40 QSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAK-KVIACEIDPSCKSYFPSLY---YFRNLCLQ--E-VPTDFDIKTLI 112 (149)
Q Consensus 40 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~i~~a~~~~---~~~~~~~~--~-~~~~~d~v~~~ 112 (149)
..++..+.. ++.+|||+|||+|.++..+ +. +|+|+|+|+.+++.++++. .....+.. . ....||.|++.
T Consensus 27 ~~~l~~~~~-~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 102 (211)
T 2gs9_A 27 ERALKGLLP-PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLF 102 (211)
T ss_dssp HHHHHTTCC-CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEE
T ss_pred HHHHHHhcC-CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEc
Confidence 344444443 7889999999999999887 56 9999999999999998864 11111111 1 23579999887
Q ss_pred HHHhccccc
Q psy1134 113 DTVLNEINF 121 (149)
Q Consensus 113 ~~~l~~~~~ 121 (149)
.+++++++
T Consensus 103 -~~l~~~~~ 110 (211)
T 2gs9_A 103 -TTLEFVED 110 (211)
T ss_dssp -SCTTTCSC
T ss_pred -ChhhhcCC
Confidence 78887764
No 80
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.21 E-value=5.3e-12 Score=93.67 Aligned_cols=46 Identities=13% Similarity=0.144 Sum_probs=39.0
Q ss_pred CCCCCCeEEEEcCCcchhHHHHHhcCC-eEEEEeCChhHHhhhhhhh
Q psy1134 47 AIRPTDTVLEIGPGTGNMTVKILEQAK-KVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 47 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~i~~a~~~~ 92 (149)
+..++.+|||||||+|.++..++..+. +|+|+|+|+.|++.|++++
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~ 98 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWL 98 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHH
Confidence 445678999999999999888777764 7999999999999988653
No 81
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.21 E-value=1.5e-11 Score=91.24 Aligned_cols=84 Identities=19% Similarity=0.222 Sum_probs=63.4
Q ss_pred HHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhcc---cCeeec-------c-CCC
Q psy1134 38 IIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYYF---RNLCLQ-------E-VPT 104 (149)
Q Consensus 38 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~~---~~~~~~-------~-~~~ 104 (149)
+...+.......++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++.. .++... . ...
T Consensus 25 l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~ 104 (276)
T 3mgg_A 25 LEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDS 104 (276)
T ss_dssp HHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTT
T ss_pred HHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCC
Confidence 4444444555567889999999999999999988 67999999999999999887532 122211 1 236
Q ss_pred CCcchhhHHHHhccccch
Q psy1134 105 DFDIKTLIDTVLNEINFA 122 (149)
Q Consensus 105 ~~d~v~~~~~~l~~~~~~ 122 (149)
.||.|++. .++++++++
T Consensus 105 ~fD~v~~~-~~l~~~~~~ 121 (276)
T 3mgg_A 105 SFDHIFVC-FVLEHLQSP 121 (276)
T ss_dssp CEEEEEEE-SCGGGCSCH
T ss_pred CeeEEEEe-chhhhcCCH
Confidence 89999887 788888765
No 82
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.20 E-value=3.1e-11 Score=90.70 Aligned_cols=74 Identities=19% Similarity=0.223 Sum_probs=52.0
Q ss_pred CCCCeEEEEcCCcchhHHHH----Hhc--CCe--EEEEeCChhHHhhhhhhhcc----cCeeec-------c--------
Q psy1134 49 RPTDTVLEIGPGTGNMTVKI----LEQ--AKK--VIACEIDPSCKSYFPSLYYF----RNLCLQ-------E-------- 101 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l----~~~--~~~--v~giD~s~~~i~~a~~~~~~----~~~~~~-------~-------- 101 (149)
.++.+|||||||+|.++..+ ++. +.. ++|+|+|++|++.|+++... .+.... .
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 45679999999999876543 222 343 39999999999999877532 122111 1
Q ss_pred -CCCCCcchhhHHHHhccccchh
Q psy1134 102 -VPTDFDIKTLIDTVLNEINFAD 123 (149)
Q Consensus 102 -~~~~~d~v~~~~~~l~~~~~~~ 123 (149)
...+||+|++. .++++++++.
T Consensus 131 ~~~~~fD~V~~~-~~l~~~~d~~ 152 (292)
T 2aot_A 131 KELQKWDFIHMI-QMLYYVKDIP 152 (292)
T ss_dssp TCCCCEEEEEEE-SCGGGCSCHH
T ss_pred cCCCceeEEEEe-eeeeecCCHH
Confidence 14679999988 8999988654
No 83
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.20 E-value=2.7e-11 Score=86.92 Aligned_cols=81 Identities=17% Similarity=0.183 Sum_probs=61.6
Q ss_pred HHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhc---ccCeee--cc-CCCCCcchhhHH
Q psy1134 40 QSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYY---FRNLCL--QE-VPTDFDIKTLID 113 (149)
Q Consensus 40 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~---~~~~~~--~~-~~~~~d~v~~~~ 113 (149)
..+.+.++ .++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++.. ..++.. .. ....||.|++.
T Consensus 23 ~~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~- 100 (230)
T 3cc8_A 23 PNLLKHIK-KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIFG- 100 (230)
T ss_dssp HHHHTTCC-TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSCTTCEEEEEEE-
T ss_pred HHHHHHhc-cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCCCCCccCEEEEC-
Confidence 44555665 578899999999999999999888899999999999999987642 122211 11 23689999887
Q ss_pred HHhccccch
Q psy1134 114 TVLNEINFA 122 (149)
Q Consensus 114 ~~l~~~~~~ 122 (149)
.++++++.+
T Consensus 101 ~~l~~~~~~ 109 (230)
T 3cc8_A 101 DVLEHLFDP 109 (230)
T ss_dssp SCGGGSSCH
T ss_pred ChhhhcCCH
Confidence 788887654
No 84
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.19 E-value=1.5e-10 Score=82.26 Aligned_cols=78 Identities=15% Similarity=0.242 Sum_probs=55.3
Q ss_pred HHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCC-eEEEEeCChhHHhhhhhhhcc-cCeee-----c--c-CCCCC
Q psy1134 37 LIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAK-KVIACEIDPSCKSYFPSLYYF-RNLCL-----Q--E-VPTDF 106 (149)
Q Consensus 37 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~i~~a~~~~~~-~~~~~-----~--~-~~~~~ 106 (149)
.+...+.+.+ .++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++... .++.. . . ....|
T Consensus 31 ~~~~~l~~~~--~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~f 108 (215)
T 2pxx_A 31 SFRALLEPEL--RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASF 108 (215)
T ss_dssp HHHHHHGGGC--CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCE
T ss_pred HHHHHHHHhc--CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcc
Confidence 3444444444 4678999999999999999999865 899999999999999887532 11211 1 1 22578
Q ss_pred cchhhHHHHhc
Q psy1134 107 DIKTLIDTVLN 117 (149)
Q Consensus 107 d~v~~~~~~l~ 117 (149)
|.|++. .+++
T Consensus 109 D~v~~~-~~~~ 118 (215)
T 2pxx_A 109 DVVLEK-GTLD 118 (215)
T ss_dssp EEEEEE-SHHH
T ss_pred cEEEEC-cchh
Confidence 998864 4443
No 85
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.19 E-value=1.6e-11 Score=103.42 Aligned_cols=87 Identities=16% Similarity=0.284 Sum_probs=66.7
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC---CeEEEEeCChhHHhhhhhhhc---------ccCeeec---
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA---KKVIACEIDPSCKSYFPSLYY---------FRNLCLQ--- 100 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~giD~s~~~i~~a~~~~~---------~~~~~~~--- 100 (149)
..+...+.+.+...++.+|||||||+|.++..+++.+ .+|+|+|+|+.|++.|++++. ..++...
T Consensus 707 eqRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGD 786 (950)
T 3htx_A 707 KQRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGS 786 (950)
T ss_dssp HHHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESC
T ss_pred HHHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECc
Confidence 3456667777766688999999999999999999986 799999999999999987432 1112211
Q ss_pred ----c-CCCCCcchhhHHHHhccccchh
Q psy1134 101 ----E-VPTDFDIKTLIDTVLNEINFAD 123 (149)
Q Consensus 101 ----~-~~~~~d~v~~~~~~l~~~~~~~ 123 (149)
. ....||.|++. .++++++.+.
T Consensus 787 a~dLp~~d~sFDlVV~~-eVLeHL~dp~ 813 (950)
T 3htx_A 787 ILEFDSRLHDVDIGTCL-EVIEHMEEDQ 813 (950)
T ss_dssp TTSCCTTSCSCCEEEEE-SCGGGSCHHH
T ss_pred hHhCCcccCCeeEEEEe-CchhhCChHH
Confidence 1 23689999987 8889888643
No 86
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.18 E-value=6.8e-11 Score=84.14 Aligned_cols=60 Identities=12% Similarity=0.225 Sum_probs=54.3
Q ss_pred cCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC--CeEEEEeCChhHHhhhhhhhc
Q psy1134 34 KNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA--KKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 34 ~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~i~~a~~~~~ 93 (149)
..+.+...++..+...++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|+++..
T Consensus 24 ~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~ 85 (204)
T 3e05_A 24 TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLK 85 (204)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHH
Confidence 557788889999998889999999999999999999985 799999999999999998753
No 87
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.18 E-value=1.2e-11 Score=86.22 Aligned_cols=62 Identities=15% Similarity=0.151 Sum_probs=46.2
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcccCeeec--cCCCCCcchhhH
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYFRNLCLQ--EVPTDFDIKTLI 112 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~--~~~~~~d~v~~~ 112 (149)
.++++|||+|||+|.++..+++.+ +|+|+|+|+.|++. ..+..+...+.. .....||.|++.
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~-~~~~~~~~~d~~~~~~~~~fD~i~~n 85 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES-HRGGNLVRADLLCSINQESVDVVVFN 85 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT-CSSSCEEECSTTTTBCGGGCSEEEEC
T ss_pred CCCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc-ccCCeEEECChhhhcccCCCCEEEEC
Confidence 467799999999999999999999 99999999999998 333322222211 122678888764
No 88
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.17 E-value=4.4e-11 Score=85.05 Aligned_cols=71 Identities=14% Similarity=0.079 Sum_probs=51.6
Q ss_pred CCCCeEEEEcCCcchhHH-HHHhcCCeEEEEeCChhHHhhhhhhhcc--cCe-----eec--cC-CCCCcchhhHHHHhc
Q psy1134 49 RPTDTVLEIGPGTGNMTV-KILEQAKKVIACEIDPSCKSYFPSLYYF--RNL-----CLQ--EV-PTDFDIKTLIDTVLN 117 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~-~l~~~~~~v~giD~s~~~i~~a~~~~~~--~~~-----~~~--~~-~~~~d~v~~~~~~l~ 117 (149)
.++.+|||+|||+|.++. .+++.+.+|+|+|+|+.+++.++++... .++ +.. .. ...||.|++. .+++
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~-~~l~ 100 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSY-GTIF 100 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEEC-SCGG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEc-ChHH
Confidence 357899999999999854 4555688999999999999999877431 111 111 12 3579999877 6777
Q ss_pred ccc
Q psy1134 118 EIN 120 (149)
Q Consensus 118 ~~~ 120 (149)
+++
T Consensus 101 ~~~ 103 (209)
T 2p8j_A 101 HMR 103 (209)
T ss_dssp GSC
T ss_pred hCC
Confidence 764
No 89
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.17 E-value=6e-11 Score=84.20 Aligned_cols=79 Identities=15% Similarity=0.132 Sum_probs=57.8
Q ss_pred cCHHHHHHHHHHc---CCCCCCeEEEEcCCcchhHHHHHhcCC-eEEEEeCChhHHhhhhhhhc---ccCeeeccCCCCC
Q psy1134 34 KNPLIIQSIVDKG---AIRPTDTVLEIGPGTGNMTVKILEQAK-KVIACEIDPSCKSYFPSLYY---FRNLCLQEVPTDF 106 (149)
Q Consensus 34 ~~~~~~~~~~~~l---~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~i~~a~~~~~---~~~~~~~~~~~~~ 106 (149)
.+......++..+ ...++++|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++.. +...+....+..|
T Consensus 32 ~~~~~~~~l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~ 111 (200)
T 1ne2_A 32 TDASTAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEISGKY 111 (200)
T ss_dssp CCHHHHHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCCCCE
T ss_pred CCHHHHHHHHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCCCCe
Confidence 5566666665544 345788999999999999999998854 79999999999999998753 1112222234678
Q ss_pred cchhhH
Q psy1134 107 DIKTLI 112 (149)
Q Consensus 107 d~v~~~ 112 (149)
|.|++.
T Consensus 112 D~v~~~ 117 (200)
T 1ne2_A 112 DTWIMN 117 (200)
T ss_dssp EEEEEC
T ss_pred eEEEEC
Confidence 888764
No 90
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.17 E-value=2.4e-11 Score=88.68 Aligned_cols=72 Identities=17% Similarity=0.184 Sum_probs=55.5
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-CCeEEEEeCChhHHhhhhhhhccc---Ceeec-----c--C-CCCCcchhhHHHHhc
Q psy1134 50 PTDTVLEIGPGTGNMTVKILEQ-AKKVIACEIDPSCKSYFPSLYYFR---NLCLQ-----E--V-PTDFDIKTLIDTVLN 117 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~~~~~~---~~~~~-----~--~-~~~~d~v~~~~~~l~ 117 (149)
++.+|||||||+|.++..+++. ..+|+|+|+|+.+++.++++.... ++... . . ...||.|++. .+++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~-~~l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQ-WVIG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEE-SCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEc-chhh
Confidence 5789999999999999999888 569999999999999998875432 11111 1 1 2479999887 7888
Q ss_pred cccch
Q psy1134 118 EINFA 122 (149)
Q Consensus 118 ~~~~~ 122 (149)
+++.+
T Consensus 158 ~~~~~ 162 (241)
T 2ex4_A 158 HLTDQ 162 (241)
T ss_dssp GSCHH
T ss_pred hCCHH
Confidence 87754
No 91
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.17 E-value=2.6e-11 Score=92.39 Aligned_cols=86 Identities=16% Similarity=0.156 Sum_probs=66.3
Q ss_pred cCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCC---eEEEEeCChhHHhhhhhhhcc---cCeeecc------
Q psy1134 34 KNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAK---KVIACEIDPSCKSYFPSLYYF---RNLCLQE------ 101 (149)
Q Consensus 34 ~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~giD~s~~~i~~a~~~~~~---~~~~~~~------ 101 (149)
..+.....++..+...++.+|||||||+|.++..+++.+. +|+|+|+|+++++.|++++.. .++....
T Consensus 59 ~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~ 138 (317)
T 1dl5_A 59 SQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG 138 (317)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC
T ss_pred cCHHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhc
Confidence 3578888999999888899999999999999999998844 499999999999999987532 2222211
Q ss_pred --CCCCCcchhhHHHHhcccc
Q psy1134 102 --VPTDFDIKTLIDTVLNEIN 120 (149)
Q Consensus 102 --~~~~~d~v~~~~~~l~~~~ 120 (149)
....||.|++. ..+++++
T Consensus 139 ~~~~~~fD~Iv~~-~~~~~~~ 158 (317)
T 1dl5_A 139 VPEFSPYDVIFVT-VGVDEVP 158 (317)
T ss_dssp CGGGCCEEEEEEC-SBBSCCC
T ss_pred cccCCCeEEEEEc-CCHHHHH
Confidence 12578888876 5666554
No 92
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.16 E-value=2.1e-11 Score=91.36 Aligned_cols=53 Identities=9% Similarity=0.089 Sum_probs=40.1
Q ss_pred HHHHHHcCC--CCCCeEEEEcCCcchhHHHHHhc-CCeEEEEeCChhHHhhhhhhh
Q psy1134 40 QSIVDKGAI--RPTDTVLEIGPGTGNMTVKILEQ-AKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 40 ~~~~~~l~~--~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~~~ 92 (149)
..+.+.+.. .++.+|||||||+|.++..++.. +.+|+|+|+|+.|++.|++++
T Consensus 59 ~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~ 114 (289)
T 2g72_A 59 RCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWL 114 (289)
T ss_dssp HHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHH
Confidence 344444432 36789999999999966555543 779999999999999987743
No 93
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.16 E-value=1.3e-10 Score=80.57 Aligned_cols=60 Identities=23% Similarity=0.243 Sum_probs=54.3
Q ss_pred cCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhc
Q psy1134 34 KNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 34 ~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~ 93 (149)
..+.+...+.+.+...++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++..
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~ 78 (183)
T 2yxd_A 19 TKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLA 78 (183)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHH
Confidence 457788889999888888999999999999999999878899999999999999998753
No 94
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.16 E-value=1.5e-11 Score=92.71 Aligned_cols=43 Identities=19% Similarity=0.287 Sum_probs=40.0
Q ss_pred CCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~ 92 (149)
++++|||||||+|.++..+++. +.+|+|+|+|+.|++.|++++
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~ 90 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNI 90 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHH
Confidence 6789999999999999999998 679999999999999998874
No 95
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.15 E-value=8.6e-11 Score=84.44 Aligned_cols=78 Identities=13% Similarity=0.148 Sum_probs=56.4
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcc--cCeeec-------c-CCCC
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYF--RNLCLQ-------E-VPTD 105 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~--~~~~~~-------~-~~~~ 105 (149)
..+...+.+.++ ++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++... .++... . ....
T Consensus 26 ~~~~~~l~~~~~--~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~ 103 (227)
T 1ve3_A 26 ETLEPLLMKYMK--KRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKT 103 (227)
T ss_dssp HHHHHHHHHSCC--SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTC
T ss_pred HHHHHHHHHhcC--CCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCc
Confidence 334455555554 478999999999999999999988999999999999999887532 111111 1 1257
Q ss_pred CcchhhHHHHh
Q psy1134 106 FDIKTLIDTVL 116 (149)
Q Consensus 106 ~d~v~~~~~~l 116 (149)
||.|++. .++
T Consensus 104 ~D~v~~~-~~~ 113 (227)
T 1ve3_A 104 FDYVIFI-DSI 113 (227)
T ss_dssp EEEEEEE-SCG
T ss_pred EEEEEEc-Cch
Confidence 8988876 553
No 96
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.14 E-value=9.3e-11 Score=81.99 Aligned_cols=72 Identities=21% Similarity=0.272 Sum_probs=54.0
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcc---cCeeec--c-CCCCCcchhhHHHHhcccc
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYF---RNLCLQ--E-VPTDFDIKTLIDTVLNEIN 120 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~---~~~~~~--~-~~~~~d~v~~~~~~l~~~~ 120 (149)
.++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++... ...+.. . ....||.|++...+++++.
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~ 122 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLA 122 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSC
T ss_pred cCCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcC
Confidence 4778999999999999999999989999999999999999887521 111111 1 2357898877545565553
No 97
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.14 E-value=6.8e-11 Score=81.34 Aligned_cols=60 Identities=13% Similarity=0.172 Sum_probs=50.5
Q ss_pred cCHHHHHHHHHHcCCC--CCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhc
Q psy1134 34 KNPLIIQSIVDKGAIR--PTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 34 ~~~~~~~~~~~~l~~~--~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~ 93 (149)
....+.+.+++.+... ++++|||+|||+|.++..+++.+..|+|+|+|+.+++.|++++.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~ 84 (171)
T 1ws6_A 23 SPVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVR 84 (171)
T ss_dssp CCHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHH
Confidence 4466777777766532 67899999999999999999998889999999999999998764
No 98
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.14 E-value=7e-11 Score=88.59 Aligned_cols=56 Identities=20% Similarity=0.313 Sum_probs=46.7
Q ss_pred HHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCC-eEEEEeC-ChhHHhhhhhhh
Q psy1134 37 LIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAK-KVIACEI-DPSCKSYFPSLY 92 (149)
Q Consensus 37 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~-s~~~i~~a~~~~ 92 (149)
.+.+.+.......++++|||+|||+|.++..+++.+. +|+|+|+ |+.+++.|+++.
T Consensus 66 ~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~ 123 (281)
T 3bzb_A 66 ALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNI 123 (281)
T ss_dssp HHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHH
Confidence 3455555555445788999999999999999998865 8999999 899999999887
No 99
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.14 E-value=6.6e-11 Score=92.26 Aligned_cols=75 Identities=19% Similarity=0.238 Sum_probs=57.4
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCC-eEEEEeCChhHHhhhhhhhcccC----eeec-------cCC
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAK-KVIACEIDPSCKSYFPSLYYFRN----LCLQ-------EVP 103 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~i~~a~~~~~~~~----~~~~-------~~~ 103 (149)
..+.+.+.......++++|||+|||+|.++..+++.+. +|+|+|+| .|++.|+++....+ +... ..+
T Consensus 49 ~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 127 (376)
T 3r0q_C 49 DAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP 127 (376)
T ss_dssp HHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS
T ss_pred HHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC
Confidence 44566666666777889999999999999999999866 99999999 99999988753321 2211 133
Q ss_pred CCCcchhh
Q psy1134 104 TDFDIKTL 111 (149)
Q Consensus 104 ~~~d~v~~ 111 (149)
..||.|++
T Consensus 128 ~~~D~Iv~ 135 (376)
T 3r0q_C 128 EKVDVIIS 135 (376)
T ss_dssp SCEEEEEE
T ss_pred CcceEEEE
Confidence 67888876
No 100
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.14 E-value=1.5e-10 Score=80.82 Aligned_cols=57 Identities=14% Similarity=0.245 Sum_probs=52.2
Q ss_pred HHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhc
Q psy1134 37 LIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 37 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~ 93 (149)
...+.+++.+...++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++..
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~ 95 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIK 95 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHH
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHH
Confidence 677888899988888999999999999999999888899999999999999998763
No 101
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.13 E-value=3.4e-11 Score=88.51 Aligned_cols=47 Identities=9% Similarity=0.078 Sum_probs=41.1
Q ss_pred CCCCCCeEEEEcCCcchhHHHHHhcCC-eEEEEeCChhHHhhhhhhhc
Q psy1134 47 AIRPTDTVLEIGPGTGNMTVKILEQAK-KVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 47 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~i~~a~~~~~ 93 (149)
+..++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.+++++.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~ 100 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLK 100 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHT
T ss_pred cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHh
Confidence 445678999999999999999998876 99999999999999987653
No 102
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.13 E-value=9e-11 Score=82.64 Aligned_cols=60 Identities=15% Similarity=0.185 Sum_probs=49.0
Q ss_pred cCHHHHHHHHHHcCC---CCCCeEEEEcCCcchhHHHHHhcC-CeEEEEeCChhHHhhhhhhhc
Q psy1134 34 KNPLIIQSIVDKGAI---RPTDTVLEIGPGTGNMTVKILEQA-KKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 34 ~~~~~~~~~~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~i~~a~~~~~ 93 (149)
....+.+.+++.+.. .++++|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++.
T Consensus 25 ~~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~ 88 (189)
T 3p9n_A 25 TTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIE 88 (189)
T ss_dssp -CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHH
Confidence 446677777776643 478899999999999999888774 589999999999999998864
No 103
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.13 E-value=8.2e-11 Score=87.80 Aligned_cols=70 Identities=14% Similarity=0.164 Sum_probs=52.9
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhcCC-eEEEEeCChhHHhhhhhhhcccC----eeec-------c--CCCCCcchhhHH
Q psy1134 48 IRPTDTVLEIGPGTGNMTVKILEQAK-KVIACEIDPSCKSYFPSLYYFRN----LCLQ-------E--VPTDFDIKTLID 113 (149)
Q Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~i~~a~~~~~~~~----~~~~-------~--~~~~~d~v~~~~ 113 (149)
..++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++....+ +... . ....||.|++.
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~- 140 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQ- 140 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEE-
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEEC-
Confidence 35788999999999999999988865 99999999999999988754321 1111 1 13578998876
Q ss_pred HHhcc
Q psy1134 114 TVLNE 118 (149)
Q Consensus 114 ~~l~~ 118 (149)
.++++
T Consensus 141 ~~l~~ 145 (298)
T 1ri5_A 141 FSFHY 145 (298)
T ss_dssp SCGGG
T ss_pred chhhh
Confidence 56655
No 104
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.12 E-value=6.6e-11 Score=89.40 Aligned_cols=52 Identities=17% Similarity=0.243 Sum_probs=42.3
Q ss_pred HHHHHHHcCCC-CCCeEEEEcCCcchhHHHHHhcC-CeEEEEeCChhHHhhhhh
Q psy1134 39 IQSIVDKGAIR-PTDTVLEIGPGTGNMTVKILEQA-KKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 39 ~~~~~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~i~~a~~ 90 (149)
...++..+.+. ++.+|||+|||||.++..+++.+ .+|+|+|+|++|++.+.+
T Consensus 73 l~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r 126 (291)
T 3hp7_A 73 LEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLR 126 (291)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHH
T ss_pred HHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHH
Confidence 34455666554 57799999999999999999985 599999999999998533
No 105
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.12 E-value=1.3e-10 Score=80.80 Aligned_cols=59 Identities=10% Similarity=0.185 Sum_probs=48.6
Q ss_pred HHHHHHHHHHcC-CCCCCeEEEEcCCcchhHHHHHhcC-CeEEEEeCChhHHhhhhhhhcc
Q psy1134 36 PLIIQSIVDKGA-IRPTDTVLEIGPGTGNMTVKILEQA-KKVIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 36 ~~~~~~~~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~i~~a~~~~~~ 94 (149)
..+.+.+++.+. ..++++|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++..
T Consensus 16 ~~~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~ 76 (177)
T 2esr_A 16 DKVRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIM 76 (177)
T ss_dssp --CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHH
Confidence 445666777776 5578899999999999999999884 6999999999999999987643
No 106
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.11 E-value=9.7e-11 Score=88.46 Aligned_cols=76 Identities=13% Similarity=0.062 Sum_probs=57.3
Q ss_pred CCCCCeEEEEcCCcchhHHHHH--hc-CCeEEEEeCChhHHhhhhhhhcccC----eee-------ccCCCCCcchhhHH
Q psy1134 48 IRPTDTVLEIGPGTGNMTVKIL--EQ-AKKVIACEIDPSCKSYFPSLYYFRN----LCL-------QEVPTDFDIKTLID 113 (149)
Q Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~--~~-~~~v~giD~s~~~i~~a~~~~~~~~----~~~-------~~~~~~~d~v~~~~ 113 (149)
..++.+|||||||+|.++..++ .. +.+|+|+|+|+.+++.|+++....+ +.. ...+..||.|++.
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~- 194 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSN- 194 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECC-
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEEC-
Confidence 3478899999999999999985 22 6799999999999999998764221 111 1134789999887
Q ss_pred HHhccccchhH
Q psy1134 114 TVLNEINFADK 124 (149)
Q Consensus 114 ~~l~~~~~~~~ 124 (149)
.++++++++..
T Consensus 195 ~~~~~~~~~~~ 205 (305)
T 3ocj_A 195 GLNIYEPDDAR 205 (305)
T ss_dssp SSGGGCCCHHH
T ss_pred ChhhhcCCHHH
Confidence 77888776543
No 107
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.10 E-value=2.2e-10 Score=83.72 Aligned_cols=44 Identities=16% Similarity=0.219 Sum_probs=39.4
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhh
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~ 92 (149)
.++.+|||+|||+|.++..++.. +.+|+|+|+|+.|++.|+++.
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~ 114 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLS 114 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHH
Confidence 46789999999999999999864 679999999999999998875
No 108
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.10 E-value=7.5e-11 Score=88.75 Aligned_cols=59 Identities=15% Similarity=0.146 Sum_probs=49.3
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc-CCeEEEEeCChhHHhhhhhhhcc
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ-AKKVIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~~~~~ 94 (149)
..+.+.+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++...
T Consensus 109 e~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~ 168 (284)
T 1nv8_A 109 EELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAER 168 (284)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH
Confidence 346666666665446679999999999999999988 78999999999999999988643
No 109
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=99.10 E-value=2.6e-10 Score=88.30 Aligned_cols=79 Identities=19% Similarity=0.233 Sum_probs=67.5
Q ss_pred cccccccccccccCHHHHHHHHHHcCCCC------CCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhc
Q psy1134 22 IQFNKDFGQHILKNPLIIQSIVDKGAIRP------TDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 22 ~~~~~~~g~~~~~~~~~~~~~~~~l~~~~------~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~ 93 (149)
..+++++||+|..++.+++++++.+.+.+ +..|||||+|.|.+|..|++. +.+|+++|+++.++..+++...
T Consensus 24 ~~~kk~lGQnFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~ 103 (353)
T 1i4w_A 24 SKLKFFYGFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFE 103 (353)
T ss_dssp CSSCCGGGCCCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTT
T ss_pred cCCCCCCCcCccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhcc
Confidence 45789999999999999999999998753 478999999999999999986 6799999999999999987654
Q ss_pred ccCeeec
Q psy1134 94 FRNLCLQ 100 (149)
Q Consensus 94 ~~~~~~~ 100 (149)
..++.+.
T Consensus 104 ~~~l~ii 110 (353)
T 1i4w_A 104 GSPLQIL 110 (353)
T ss_dssp TSSCEEE
T ss_pred CCCEEEE
Confidence 3444443
No 110
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.09 E-value=9.1e-11 Score=86.74 Aligned_cols=52 Identities=12% Similarity=0.233 Sum_probs=45.1
Q ss_pred HHHHcCCC-CCCeEEEEcCCcchhHHHHHhcCC-eEEEEeCChhHHhhhhhhhc
Q psy1134 42 IVDKGAIR-PTDTVLEIGPGTGNMTVKILEQAK-KVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 42 ~~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~i~~a~~~~~ 93 (149)
+...+... ++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|++++.
T Consensus 40 l~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~ 93 (259)
T 3lpm_A 40 LAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVA 93 (259)
T ss_dssp HHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHH
Confidence 44556666 788999999999999999999854 99999999999999998754
No 111
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.09 E-value=5e-10 Score=78.03 Aligned_cols=60 Identities=18% Similarity=0.215 Sum_probs=54.1
Q ss_pred ccCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 33 LKNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 33 ~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
.....+...+++.+...++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~ 75 (192)
T 1l3i_A 16 PTAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNL 75 (192)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHH
T ss_pred CChHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHH
Confidence 355778888888888888999999999999999999998899999999999999998865
No 112
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.08 E-value=1.6e-10 Score=82.15 Aligned_cols=63 Identities=22% Similarity=0.316 Sum_probs=49.3
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC-CeEEEEeCChhHHhhhhhhhcccC---eeecc------CCCCCcchhh
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQA-KKVIACEIDPSCKSYFPSLYYFRN---LCLQE------VPTDFDIKTL 111 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~i~~a~~~~~~~~---~~~~~------~~~~~d~v~~ 111 (149)
.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|+++....+ +.... ....||.|++
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~ 131 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVA 131 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEE
Confidence 467899999999999999999885 499999999999999998754322 22211 2367888876
No 113
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.08 E-value=3.5e-10 Score=84.64 Aligned_cols=86 Identities=16% Similarity=0.074 Sum_probs=59.9
Q ss_pred HHHHHHHHHHcC-CCCCCeEEEEcCCc---chhHHHHHhc--CCeEEEEeCChhHHhhhhhhhcc-cCeeecc-------
Q psy1134 36 PLIIQSIVDKGA-IRPTDTVLEIGPGT---GNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYYF-RNLCLQE------- 101 (149)
Q Consensus 36 ~~~~~~~~~~l~-~~~~~~vLDiGcG~---G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~~-~~~~~~~------- 101 (149)
..+..++...+. .....+|||||||+ |.++..+.+. +.+|+++|+|+.|++.|++++.. .+.....
T Consensus 62 ~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~ 141 (274)
T 2qe6_A 62 RKVLVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPE 141 (274)
T ss_dssp HHHHHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHH
T ss_pred hHHHHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCch
Confidence 456666666664 23457999999999 9988777665 67999999999999999887532 1121111
Q ss_pred ------------CCCCCcchhhHHHHhccccch
Q psy1134 102 ------------VPTDFDIKTLIDTVLNEINFA 122 (149)
Q Consensus 102 ------------~~~~~d~v~~~~~~l~~~~~~ 122 (149)
....+|.+++. .+++++++.
T Consensus 142 ~~~~~~~~~~~~d~~~~d~v~~~-~vlh~~~d~ 173 (274)
T 2qe6_A 142 YILNHPDVRRMIDFSRPAAIMLV-GMLHYLSPD 173 (274)
T ss_dssp HHHHSHHHHHHCCTTSCCEEEET-TTGGGSCTT
T ss_pred hhhccchhhccCCCCCCEEEEEe-chhhhCCcH
Confidence 11357777766 888888753
No 114
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.08 E-value=5.8e-11 Score=92.66 Aligned_cols=73 Identities=22% Similarity=0.281 Sum_probs=51.5
Q ss_pred HHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC-CeEEEEeCChhHHhhhhhhhcccC----eee-------ccCCCC
Q psy1134 38 IIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA-KKVIACEIDPSCKSYFPSLYYFRN----LCL-------QEVPTD 105 (149)
Q Consensus 38 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~i~~a~~~~~~~~----~~~-------~~~~~~ 105 (149)
|...+.+.....++++|||||||||.++..+++.| .+|+|||.|+ |++.|++++...+ +.. ...++.
T Consensus 71 Y~~Ai~~~~~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~ 149 (376)
T 4hc4_A 71 YRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELPEQ 149 (376)
T ss_dssp HHHHHHTTHHHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCSSC
T ss_pred HHHHHHhCHHhcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCCcc
Confidence 44444443333478999999999999999999886 5899999996 8888887643222 221 224567
Q ss_pred Ccchhh
Q psy1134 106 FDIKTL 111 (149)
Q Consensus 106 ~d~v~~ 111 (149)
+|.+++
T Consensus 150 ~Dvivs 155 (376)
T 4hc4_A 150 VDAIVS 155 (376)
T ss_dssp EEEEEC
T ss_pred ccEEEe
Confidence 888765
No 115
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.08 E-value=3e-10 Score=79.21 Aligned_cols=60 Identities=13% Similarity=0.161 Sum_probs=51.1
Q ss_pred cCHHHHHHHHHHcC-CCCCCeEEEEcCCcchhHHHHHhcC-CeEEEEeCChhHHhhhhhhhc
Q psy1134 34 KNPLIIQSIVDKGA-IRPTDTVLEIGPGTGNMTVKILEQA-KKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 34 ~~~~~~~~~~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~i~~a~~~~~ 93 (149)
....+.+.+++.+. ..++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++.
T Consensus 27 ~~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~ 88 (187)
T 2fhp_A 27 TTDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIA 88 (187)
T ss_dssp CCHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHH
Confidence 34778888888874 3578899999999999999988874 699999999999999998763
No 116
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.07 E-value=1.6e-10 Score=87.52 Aligned_cols=43 Identities=23% Similarity=0.306 Sum_probs=38.5
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-CCeEEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGPGTGNMTVKILEQ-AKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~~~ 92 (149)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|+++.
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~ 77 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRY 77 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHH
Confidence 6779999999999999999876 679999999999999998764
No 117
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.06 E-value=2.2e-10 Score=84.57 Aligned_cols=45 Identities=11% Similarity=0.155 Sum_probs=40.6
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhc
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~ 93 (149)
.++.+|||||||+|..++.++.. +.+|+++|+|+.+++.|+++..
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~ 125 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIE 125 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH
Confidence 46789999999999999999887 6799999999999999998753
No 118
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.06 E-value=2.4e-10 Score=85.32 Aligned_cols=75 Identities=17% Similarity=0.171 Sum_probs=54.9
Q ss_pred hhcccccccccccccCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC--CeEEEEeCChhHHhhhhhhhcc
Q psy1134 20 ICIQFNKDFGQHILKNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA--KKVIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 20 ~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~i~~a~~~~~~ 94 (149)
.+..+....+..|+.+....+.+.......++++|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++..
T Consensus 89 ~g~~f~~~~~~~f~~~~~~~e~~~~~~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~ 165 (272)
T 3a27_A 89 YGCLFKLDVAKIMWSQGNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKL 165 (272)
T ss_dssp TTEEEEEETTTSCCCGGGHHHHHHHHTSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHH
T ss_pred CCEEEEEechhEEECCCchHHHHHHHHhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 45555555555454544333433333345578899999999999999999984 4999999999999999988643
No 119
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.05 E-value=4.4e-10 Score=89.15 Aligned_cols=53 Identities=21% Similarity=0.434 Sum_probs=48.6
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc-C-CeEEEEeCChhHHhhh
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ-A-KKVIACEIDPSCKSYF 88 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~-~~v~giD~s~~~i~~a 88 (149)
+.+...+++.+...++.+|||||||+|.++..+++. + .+|+|+|+|+.+++.|
T Consensus 228 p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A 282 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLT 282 (433)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence 788889999998888999999999999999999986 4 5799999999999988
No 120
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.05 E-value=2.8e-10 Score=83.29 Aligned_cols=54 Identities=20% Similarity=0.273 Sum_probs=44.9
Q ss_pred HHHHHHHHcCCC-CCCeEEEEcCCcchhHHHHHhcC-CeEEEEeCChhHHhhhhhh
Q psy1134 38 IIQSIVDKGAIR-PTDTVLEIGPGTGNMTVKILEQA-KKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 38 ~~~~~~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~i~~a~~~ 91 (149)
....+++.+... ++++|||||||||.++..+++.+ .+|+|+|+|++|++.++++
T Consensus 24 kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~ 79 (232)
T 3opn_A 24 KLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRS 79 (232)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHT
T ss_pred HHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHh
Confidence 345566666554 46799999999999999999996 5999999999999997764
No 121
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.05 E-value=4.8e-10 Score=80.17 Aligned_cols=86 Identities=17% Similarity=0.126 Sum_probs=66.5
Q ss_pred cCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC---CeEEEEeCChhHHhhhhhhhcc---cCeeecc------
Q psy1134 34 KNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA---KKVIACEIDPSCKSYFPSLYYF---RNLCLQE------ 101 (149)
Q Consensus 34 ~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~giD~s~~~i~~a~~~~~~---~~~~~~~------ 101 (149)
..+.....+...+...++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.+++++.. .++....
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 140 (215)
T 2yxe_A 61 SAIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLG 140 (215)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGC
T ss_pred CcHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccC
Confidence 558888889999988889999999999999999999884 7999999999999999887531 2222111
Q ss_pred C--CCCCcchhhHHHHhcccc
Q psy1134 102 V--PTDFDIKTLIDTVLNEIN 120 (149)
Q Consensus 102 ~--~~~~d~v~~~~~~l~~~~ 120 (149)
. ...||.|++. .++++++
T Consensus 141 ~~~~~~fD~v~~~-~~~~~~~ 160 (215)
T 2yxe_A 141 YEPLAPYDRIYTT-AAGPKIP 160 (215)
T ss_dssp CGGGCCEEEEEES-SBBSSCC
T ss_pred CCCCCCeeEEEEC-CchHHHH
Confidence 1 3578888776 5666554
No 122
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.05 E-value=1.8e-10 Score=81.85 Aligned_cols=58 Identities=14% Similarity=0.186 Sum_probs=39.3
Q ss_pred HHHHHHHHHHcCC-CCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhc
Q psy1134 36 PLIIQSIVDKGAI-RPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 36 ~~~~~~~~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~ 93 (149)
..+..++++.+.. .++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++.
T Consensus 15 ~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~ 75 (215)
T 4dzr_A 15 EVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAE 75 (215)
T ss_dssp HHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------------
T ss_pred HHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHH
Confidence 4466777777765 57889999999999999999998 5599999999999999998754
No 123
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.05 E-value=2.6e-10 Score=82.74 Aligned_cols=60 Identities=15% Similarity=0.194 Sum_probs=51.7
Q ss_pred cCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhc
Q psy1134 34 KNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 34 ~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~ 93 (149)
.++.....+...+...++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.|++++.
T Consensus 38 ~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~ 99 (233)
T 2gpy_A 38 MDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVK 99 (233)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH
Confidence 55777777777766667889999999999999999988 6899999999999999998753
No 124
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.04 E-value=1.8e-10 Score=82.22 Aligned_cols=59 Identities=12% Similarity=0.095 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHcCCC-CCCeEEEEcCCcchhHHHHHhcC-CeEEEEeCChhHHhhhhhhhc
Q psy1134 35 NPLIIQSIVDKGAIR-PTDTVLEIGPGTGNMTVKILEQA-KKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 35 ~~~~~~~~~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~i~~a~~~~~ 93 (149)
...+.+.+++.+... ++.+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.|++++.
T Consensus 38 ~~~~~~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~ 98 (202)
T 2fpo_A 38 TDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLA 98 (202)
T ss_dssp CHHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHH
Confidence 356666677666542 67899999999999999887775 599999999999999998764
No 125
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.04 E-value=1.1e-10 Score=84.97 Aligned_cols=44 Identities=11% Similarity=0.030 Sum_probs=36.7
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCC-hhHHhhh---hhhh
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEID-PSCKSYF---PSLY 92 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s-~~~i~~a---~~~~ 92 (149)
.++.+|||||||+|.++..+++. +..|+|+|+| +.|++.| +++.
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~ 72 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKP 72 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCG
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHH
Confidence 46789999999999999999864 6789999999 7776666 6654
No 126
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.04 E-value=4.4e-10 Score=83.07 Aligned_cols=46 Identities=26% Similarity=0.423 Sum_probs=41.9
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcc
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~ 94 (149)
.++++|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++...
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~ 164 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKR 164 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHH
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHH
Confidence 4688999999999999999999888999999999999999988643
No 127
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.04 E-value=1.7e-10 Score=82.38 Aligned_cols=58 Identities=16% Similarity=0.153 Sum_probs=46.6
Q ss_pred HHHHHHHHHHcCCC-CCCeEEEEcCCcchhHHHHHhcC-CeEEEEeCChhHHhhhhhhhc
Q psy1134 36 PLIIQSIVDKGAIR-PTDTVLEIGPGTGNMTVKILEQA-KKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 36 ~~~~~~~~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~i~~a~~~~~ 93 (149)
..+.+.+++.+... ++.+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.|++++.
T Consensus 38 ~~~~~~l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~ 97 (201)
T 2ift_A 38 DRVKETLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQ 97 (201)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHH
Confidence 34555566655432 67899999999999999877775 589999999999999998764
No 128
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.03 E-value=2.1e-10 Score=83.52 Aligned_cols=82 Identities=18% Similarity=0.104 Sum_probs=59.0
Q ss_pred HHHHHHHHHHcCC-CCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcccC----eeecc-------CC
Q psy1134 36 PLIIQSIVDKGAI-RPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYFRN----LCLQE-------VP 103 (149)
Q Consensus 36 ~~~~~~~~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~~~----~~~~~-------~~ 103 (149)
..+...+...+.. .++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++...+ +.... ..
T Consensus 63 ~~~~~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 142 (241)
T 3gdh_A 63 EKIAEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASF 142 (241)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGG
T ss_pred HHHHHHHHHHhhhccCCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhccc
Confidence 3345555555432 268899999999999999999999999999999999999998764322 22221 23
Q ss_pred CCCcchhhHHHHhcc
Q psy1134 104 TDFDIKTLIDTVLNE 118 (149)
Q Consensus 104 ~~~d~v~~~~~~l~~ 118 (149)
..||.|++. ..+++
T Consensus 143 ~~~D~v~~~-~~~~~ 156 (241)
T 3gdh_A 143 LKADVVFLS-PPWGG 156 (241)
T ss_dssp CCCSEEEEC-CCCSS
T ss_pred CCCCEEEEC-CCcCC
Confidence 688988764 33333
No 129
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.03 E-value=3.8e-10 Score=88.03 Aligned_cols=74 Identities=20% Similarity=0.112 Sum_probs=56.1
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhhcc-----------cCeeec-------------
Q psy1134 48 IRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLYYF-----------RNLCLQ------------- 100 (149)
Q Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~~~-----------~~~~~~------------- 100 (149)
..++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++.. .++...
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 346789999999999999999886 45999999999999999876421 122221
Q ss_pred c-CCCCCcchhhHHHHhccccch
Q psy1134 101 E-VPTDFDIKTLIDTVLNEINFA 122 (149)
Q Consensus 101 ~-~~~~~d~v~~~~~~l~~~~~~ 122 (149)
. ....||.|++. .+++++++.
T Consensus 161 ~~~~~~fD~V~~~-~~l~~~~d~ 182 (383)
T 4fsd_A 161 GVPDSSVDIVISN-CVCNLSTNK 182 (383)
T ss_dssp CCCTTCEEEEEEE-SCGGGCSCH
T ss_pred CCCCCCEEEEEEc-cchhcCCCH
Confidence 1 12589999887 777877653
No 130
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.03 E-value=1.2e-10 Score=87.42 Aligned_cols=61 Identities=15% Similarity=0.179 Sum_probs=42.3
Q ss_pred cccCHHHHHHHHHH-cCCCCCCeEEEEcCCcch----hHHHHHhc-C-----CeEEEEeCChhHHhhhhhhh
Q psy1134 32 ILKNPLIIQSIVDK-GAIRPTDTVLEIGPGTGN----MTVKILEQ-A-----KKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 32 ~~~~~~~~~~~~~~-l~~~~~~~vLDiGcG~G~----~~~~l~~~-~-----~~v~giD~s~~~i~~a~~~~ 92 (149)
|+.++.....+.+. ++..++.+|||+|||||. ++..|++. + .+|+|+|+|++|++.|+++.
T Consensus 86 FfRd~~~f~~l~~~llp~~~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~ 157 (274)
T 1af7_A 86 FFREAHHFPILAEHARRRHGEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGI 157 (274)
T ss_dssp TTTTTTHHHHHHHHHHHSCSCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTE
T ss_pred ccCChHHHHHHHHHccCCCCCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcC
Confidence 44444444444433 222245689999999998 66666665 2 48999999999999998763
No 131
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.03 E-value=5.4e-10 Score=81.30 Aligned_cols=75 Identities=13% Similarity=0.089 Sum_probs=54.9
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC-CeEEEEeCChhHHhhhhhhhcccC--eee-------c--cC-
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA-KKVIACEIDPSCKSYFPSLYYFRN--LCL-------Q--EV- 102 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~i~~a~~~~~~~~--~~~-------~--~~- 102 (149)
..+...+...+ ..++.+|||||||+|.++..+++.+ .+|+|+|+|+.|++.|+++....+ +.. . ..
T Consensus 47 ~~~~~~l~~~~-~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~ 125 (236)
T 1zx0_A 47 TPYMHALAAAA-SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLP 125 (236)
T ss_dssp HHHHHHHHHHH-TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSC
T ss_pred HHHHHHHHhhc-CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccC
Confidence 45556555554 3467899999999999999998764 489999999999999998764322 211 1 12
Q ss_pred CCCCcchhh
Q psy1134 103 PTDFDIKTL 111 (149)
Q Consensus 103 ~~~~d~v~~ 111 (149)
...||.|++
T Consensus 126 ~~~fD~V~~ 134 (236)
T 1zx0_A 126 DGHFDGILY 134 (236)
T ss_dssp TTCEEEEEE
T ss_pred CCceEEEEE
Confidence 257898876
No 132
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.03 E-value=2.9e-10 Score=89.16 Aligned_cols=88 Identities=18% Similarity=0.125 Sum_probs=60.5
Q ss_pred cccccccccccccCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhhcccCee
Q psy1134 22 IQFNKDFGQHILKNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLYYFRNLC 98 (149)
Q Consensus 22 ~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~~~~~~~ 98 (149)
...++..|+++ +++.+.+.+++.+...++.+|||+|||+|.++..++++ +.+|+|+|+++.+++.| .+......+
T Consensus 12 ~~~~~~~g~~~-TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-~~~~~~~~D 89 (421)
T 2ih2_A 12 NSAPRSLGRVE-TPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-PWAEGILAD 89 (421)
T ss_dssp ---------CC-CCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-TTEEEEESC
T ss_pred hhhcccCceEe-CCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-CCCcEEeCC
Confidence 34455667765 78999999999998666779999999999999999985 47999999999999988 222221112
Q ss_pred ec--cCCCCCcchhh
Q psy1134 99 LQ--EVPTDFDIKTL 111 (149)
Q Consensus 99 ~~--~~~~~~d~v~~ 111 (149)
.. .....||.|++
T Consensus 90 ~~~~~~~~~fD~Ii~ 104 (421)
T 2ih2_A 90 FLLWEPGEAFDLILG 104 (421)
T ss_dssp GGGCCCSSCEEEEEE
T ss_pred hhhcCccCCCCEEEE
Confidence 11 12357888876
No 133
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.03 E-value=3.3e-10 Score=82.07 Aligned_cols=44 Identities=18% Similarity=0.214 Sum_probs=39.4
Q ss_pred CCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhc
Q psy1134 50 PTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~ 93 (149)
++.+|||||||+|.++..+++. +..|+|+|+|+.+++.|+++..
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~ 79 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAH 79 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHH
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHH
Confidence 5679999999999999999987 4679999999999999988753
No 134
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.02 E-value=4e-10 Score=87.90 Aligned_cols=57 Identities=12% Similarity=0.148 Sum_probs=49.6
Q ss_pred HHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhcc
Q psy1134 38 IIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 38 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~~ 94 (149)
-.+.+++.++..++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++..
T Consensus 210 ~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ 268 (375)
T 4dcm_A 210 GARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVET 268 (375)
T ss_dssp HHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHH
Confidence 4456778888777789999999999999999998 68999999999999999988643
No 135
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.02 E-value=4.7e-10 Score=88.35 Aligned_cols=56 Identities=13% Similarity=0.266 Sum_probs=49.9
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc-CC-eEEEEeCChhHHhhhhhh
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ-AK-KVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~-~v~giD~s~~~i~~a~~~ 91 (149)
......+++.+.+.++.+|||||||+|.+++.++.. +. +|+|||+|+.+++.|+++
T Consensus 159 ~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n 216 (438)
T 3uwp_A 159 FDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETM 216 (438)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence 667888899999889999999999999999999865 54 599999999999999865
No 136
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.02 E-value=1.1e-10 Score=86.66 Aligned_cols=95 Identities=12% Similarity=0.168 Sum_probs=67.8
Q ss_pred HHHHHcCCCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhcccCe---------eeccCCCCCcch
Q psy1134 41 SIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYYFRNL---------CLQEVPTDFDIK 109 (149)
Q Consensus 41 ~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~~~~~---------~~~~~~~~~d~v 109 (149)
.++..++ .+.+|||||||+|.++..++.. ...|+++|+|+.|++.+++++...+. ...+.+..+|++
T Consensus 125 ~i~~~i~--~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~Dva 202 (281)
T 3lcv_B 125 ELFRHLP--RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVT 202 (281)
T ss_dssp HHGGGSC--CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEE
T ss_pred HHHhccC--CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchH
Confidence 3444453 4779999999999999999877 57999999999999999988633222 122255799999
Q ss_pred hhHHHHhccccchhHhhccCChhhHHHHHHhhhccC
Q psy1134 110 TLIDTVLNEINFADKRARTMDLDDFVLLLATFNKHG 145 (149)
Q Consensus 110 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (149)
++. .+++++....+. ..| +++..++..|
T Consensus 203 L~l-kti~~Le~q~kg------~g~-~ll~aL~~~~ 230 (281)
T 3lcv_B 203 LLL-KTLPCLETQQRG------SGW-EVIDIVNSPN 230 (281)
T ss_dssp EET-TCHHHHHHHSTT------HHH-HHHHHSSCSE
T ss_pred HHH-HHHHHhhhhhhH------HHH-HHHHHhCCCC
Confidence 877 666666544332 223 6777777666
No 137
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.02 E-value=6.1e-10 Score=81.03 Aligned_cols=86 Identities=17% Similarity=0.265 Sum_probs=65.1
Q ss_pred cCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC-CeEEEEeCChhHHhhhhhhhcc---cCeeecc------C-
Q psy1134 34 KNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA-KKVIACEIDPSCKSYFPSLYYF---RNLCLQE------V- 102 (149)
Q Consensus 34 ~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~i~~a~~~~~~---~~~~~~~------~- 102 (149)
..+.....+.+.+...++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.|++++.. .++.... .
T Consensus 75 ~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 154 (235)
T 1jg1_A 75 SAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFP 154 (235)
T ss_dssp CCHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG
T ss_pred ccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCC
Confidence 457788889998888888999999999999999999985 8999999999999999987532 2222211 1
Q ss_pred -CCCCcchhhHHHHhcccc
Q psy1134 103 -PTDFDIKTLIDTVLNEIN 120 (149)
Q Consensus 103 -~~~~d~v~~~~~~l~~~~ 120 (149)
...||.|++. ..+++++
T Consensus 155 ~~~~fD~Ii~~-~~~~~~~ 172 (235)
T 1jg1_A 155 PKAPYDVIIVT-AGAPKIP 172 (235)
T ss_dssp GGCCEEEEEEC-SBBSSCC
T ss_pred CCCCccEEEEC-CcHHHHH
Confidence 1247888765 4444443
No 138
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.02 E-value=1.6e-09 Score=78.15 Aligned_cols=55 Identities=29% Similarity=0.252 Sum_probs=46.0
Q ss_pred HHHHHHHcCCCCCCeEEEEcCC-cchhHHHHHhc-CCeEEEEeCChhHHhhhhhhhc
Q psy1134 39 IQSIVDKGAIRPTDTVLEIGPG-TGNMTVKILEQ-AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 39 ~~~~~~~l~~~~~~~vLDiGcG-~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~~~~ 93 (149)
.+.+.......++++|||+||| +|.++..+++. +.+|+|+|+|+.+++.|+++..
T Consensus 44 ~~~l~~~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~ 100 (230)
T 3evz_A 44 SRYIFLKTFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIE 100 (230)
T ss_dssp HHHHHHHTTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHH
T ss_pred hhhhHhHhhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHH
Confidence 3444333344578899999999 99999999998 8999999999999999998754
No 139
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.02 E-value=3.7e-10 Score=81.47 Aligned_cols=60 Identities=18% Similarity=0.231 Sum_probs=48.7
Q ss_pred cCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhhc
Q psy1134 34 KNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 34 ~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~~ 93 (149)
..+.....+...+...++++|||||||+|..+..+++. +.+|+++|+|+.+++.|++++.
T Consensus 42 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~ 104 (221)
T 3u81_A 42 VGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLN 104 (221)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHH
Confidence 44555555555555556889999999999999999985 6799999999999999998753
No 140
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.02 E-value=9.5e-10 Score=78.85 Aligned_cols=44 Identities=23% Similarity=0.308 Sum_probs=39.8
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhh
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~ 92 (149)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++.
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~ 85 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKV 85 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHH
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHH
Confidence 35779999999999999999988 579999999999999998875
No 141
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.01 E-value=4.6e-10 Score=84.03 Aligned_cols=55 Identities=24% Similarity=0.298 Sum_probs=46.1
Q ss_pred HHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCC-eEEEEeCChhHHhhhhhhhc
Q psy1134 37 LIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAK-KVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 37 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~i~~a~~~~~ 93 (149)
.-..++.+.+. ++++|||+|||+|.++..+++.+. +|+|+|+|+.+++.|++++.
T Consensus 114 ~~~~~l~~~~~--~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~ 169 (278)
T 2frn_A 114 KERVRMAKVAK--PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIH 169 (278)
T ss_dssp HHHHHHHHHCC--TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCC--CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHH
Confidence 45555555543 688999999999999999999866 69999999999999998864
No 142
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.01 E-value=4.6e-10 Score=80.79 Aligned_cols=59 Identities=19% Similarity=0.115 Sum_probs=47.7
Q ss_pred CHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhhc
Q psy1134 35 NPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 35 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~~ 93 (149)
.+.....+...+...++++|||||||+|..+..+++. +.+|+++|+++.+++.|++++.
T Consensus 43 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~ 104 (223)
T 3duw_A 43 SPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIE 104 (223)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH
Confidence 3444444444444457889999999999999999998 6799999999999999998764
No 143
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.00 E-value=4.9e-10 Score=86.40 Aligned_cols=76 Identities=17% Similarity=0.200 Sum_probs=57.2
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC-CeEEEEeCChhHHhhhhhhhccc----Ceeecc-------CC
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA-KKVIACEIDPSCKSYFPSLYYFR----NLCLQE-------VP 103 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~i~~a~~~~~~~----~~~~~~-------~~ 103 (149)
..+.+.+.+.+...++++|||||||+|.++..+++.+ .+|+|+|+|+ +++.|+++.... ++.... .+
T Consensus 36 ~~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~ 114 (348)
T 2y1w_A 36 GTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP 114 (348)
T ss_dssp HHHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS
T ss_pred HHHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC
Confidence 4567777787777788999999999999999999885 5999999996 888888765321 222211 23
Q ss_pred CCCcchhhH
Q psy1134 104 TDFDIKTLI 112 (149)
Q Consensus 104 ~~~d~v~~~ 112 (149)
..||.|++.
T Consensus 115 ~~~D~Ivs~ 123 (348)
T 2y1w_A 115 EQVDIIISE 123 (348)
T ss_dssp SCEEEEEEC
T ss_pred CceeEEEEe
Confidence 578888764
No 144
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.00 E-value=3.2e-10 Score=81.37 Aligned_cols=47 Identities=26% Similarity=0.360 Sum_probs=40.5
Q ss_pred HHHHHcCCCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhh
Q psy1134 41 SIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSY 87 (149)
Q Consensus 41 ~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~ 87 (149)
..+..+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.
T Consensus 18 ~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~ 66 (218)
T 3mq2_A 18 AEFEQLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEK 66 (218)
T ss_dssp HHHHHHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHH
T ss_pred HHHHHhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHH
Confidence 3445555667889999999999999999998 6899999999998886
No 145
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.99 E-value=5.7e-10 Score=81.01 Aligned_cols=55 Identities=16% Similarity=0.234 Sum_probs=45.4
Q ss_pred HHHHH---HHHcCCCCCCeEEEEcCCcchhHHHHHhc-C-CeEEEEeCChhHHhhhhhhh
Q psy1134 38 IIQSI---VDKGAIRPTDTVLEIGPGTGNMTVKILEQ-A-KKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 38 ~~~~~---~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~-~~v~giD~s~~~i~~a~~~~ 92 (149)
+...+ ++.+...++.+|||+|||+|.++..+++. + .+|+|+|+|+.+++.++++.
T Consensus 59 ~~~~i~~~l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~ 118 (230)
T 1fbn_A 59 LAAAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDAC 118 (230)
T ss_dssp HHHHHHTTCCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHT
T ss_pred HHHHHHhcccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHh
Confidence 33555 44455567889999999999999999988 3 79999999999999988765
No 146
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.99 E-value=1.3e-09 Score=78.65 Aligned_cols=60 Identities=17% Similarity=0.248 Sum_probs=51.1
Q ss_pred cCHHHHHHHHHHc--CCCCCCeEEEEcCCcchhHHHHHhcCC-------eEEEEeCChhHHhhhhhhhc
Q psy1134 34 KNPLIIQSIVDKG--AIRPTDTVLEIGPGTGNMTVKILEQAK-------KVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 34 ~~~~~~~~~~~~l--~~~~~~~vLDiGcG~G~~~~~l~~~~~-------~v~giD~s~~~i~~a~~~~~ 93 (149)
..+.+...+++.+ ...++.+|||+|||+|.++..+++... +|+|+|+|+.+++.|++++.
T Consensus 62 ~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~ 130 (227)
T 2pbf_A 62 SAPHMHALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIK 130 (227)
T ss_dssp CCHHHHHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHH
Confidence 4577777888877 456788999999999999999998753 99999999999999988753
No 147
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.98 E-value=9.3e-10 Score=86.04 Aligned_cols=75 Identities=16% Similarity=0.191 Sum_probs=55.3
Q ss_pred HHHHHHHHcC--CCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcccC--eeecc-------CC-CC
Q psy1134 38 IIQSIVDKGA--IRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYFRN--LCLQE-------VP-TD 105 (149)
Q Consensus 38 ~~~~~~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~~~--~~~~~-------~~-~~ 105 (149)
+.+.+...+. ..++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++...+ ..... .. ..
T Consensus 219 ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~ 298 (381)
T 3dmg_A 219 LLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEAR 298 (381)
T ss_dssp HHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCC
T ss_pred HHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCC
Confidence 4444444442 3467899999999999999999998999999999999999998864322 22111 12 57
Q ss_pred CcchhhH
Q psy1134 106 FDIKTLI 112 (149)
Q Consensus 106 ~d~v~~~ 112 (149)
||.|++.
T Consensus 299 fD~Ii~n 305 (381)
T 3dmg_A 299 FDIIVTN 305 (381)
T ss_dssp EEEEEEC
T ss_pred eEEEEEC
Confidence 8888764
No 148
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.98 E-value=7.3e-10 Score=81.23 Aligned_cols=57 Identities=11% Similarity=0.260 Sum_probs=47.2
Q ss_pred HHHHHHHH---HcCCCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhhc
Q psy1134 37 LIIQSIVD---KGAIRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 37 ~~~~~~~~---~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~~ 93 (149)
++..-+++ .+++.+|.+|||+|||+|.++..+++. ..+|+|+|+|++|++.++++..
T Consensus 61 klaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~ 123 (233)
T 4df3_A 61 KLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVR 123 (233)
T ss_dssp HHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHST
T ss_pred HHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhH
Confidence 34444444 456789999999999999999999997 4689999999999999987753
No 149
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.98 E-value=1.4e-09 Score=79.80 Aligned_cols=57 Identities=25% Similarity=0.310 Sum_probs=51.6
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhh
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~ 92 (149)
+.....++..+...++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|++++
T Consensus 79 ~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~ 138 (255)
T 3mb5_A 79 PKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENI 138 (255)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHH
T ss_pred HhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHH
Confidence 556678888888889999999999999999999988 689999999999999999875
No 150
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.98 E-value=5.7e-10 Score=81.22 Aligned_cols=59 Identities=17% Similarity=0.200 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhc
Q psy1134 35 NPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 35 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~ 93 (149)
.+.....+...+...++++|||||||+|..+..+++. +.+|+++|+|+.+++.|++++.
T Consensus 56 ~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~ 116 (232)
T 3ntv_A 56 DRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLA 116 (232)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH
Confidence 4566666666666567889999999999999999984 6899999999999999998763
No 151
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.98 E-value=6.8e-10 Score=79.93 Aligned_cols=43 Identities=16% Similarity=0.216 Sum_probs=36.4
Q ss_pred cCCCCCCeEEEEcCCcchhHHHHHhcC--CeEEEEeCChhHHhhh
Q psy1134 46 GAIRPTDTVLEIGPGTGNMTVKILEQA--KKVIACEIDPSCKSYF 88 (149)
Q Consensus 46 l~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~i~~a 88 (149)
+.+.++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.+
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~ 97 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKL 97 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHH
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHH
Confidence 345678899999999999999999873 6899999999876544
No 152
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.97 E-value=7.5e-10 Score=79.68 Aligned_cols=59 Identities=17% Similarity=0.247 Sum_probs=47.1
Q ss_pred CHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhhc
Q psy1134 35 NPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 35 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~~ 93 (149)
.+.....+...+...++++|||+|||+|..+..+++. +.+|+++|+|+.+++.|++++.
T Consensus 49 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~ 110 (225)
T 3tr6_A 49 APEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWE 110 (225)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHH
Confidence 3444444444444446789999999999999999987 6899999999999999998763
No 153
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.97 E-value=7.3e-10 Score=83.80 Aligned_cols=43 Identities=26% Similarity=0.406 Sum_probs=39.5
Q ss_pred CCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~ 92 (149)
++++|||||||+|.++..+++. ..+|+++|+|+.+++.|++++
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~ 127 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYL 127 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHC
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhh
Confidence 5789999999999999999988 568999999999999999875
No 154
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.97 E-value=1.2e-09 Score=86.69 Aligned_cols=58 Identities=22% Similarity=0.244 Sum_probs=50.8
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhc
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~ 93 (149)
+.+..++++.+...++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++.
T Consensus 272 e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~ 329 (433)
T 1uwv_A 272 QKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNAR 329 (433)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHH
Confidence 3466667777777778899999999999999999998999999999999999998864
No 155
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.96 E-value=3.3e-10 Score=87.16 Aligned_cols=76 Identities=14% Similarity=0.213 Sum_probs=58.2
Q ss_pred HHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC--CeEEEEeCChhHHhhhhhhhcccCee--ecc------CCCCC
Q psy1134 37 LIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA--KKVIACEIDPSCKSYFPSLYYFRNLC--LQE------VPTDF 106 (149)
Q Consensus 37 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~i~~a~~~~~~~~~~--~~~------~~~~~ 106 (149)
...+.+++.+...++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.+++++...+.. ... ....|
T Consensus 183 ~~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~f 262 (343)
T 2pjd_A 183 VGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRF 262 (343)
T ss_dssp HHHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSCE
T ss_pred HHHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccCCe
Confidence 456777888866667899999999999999999884 58999999999999999876432211 111 24578
Q ss_pred cchhhH
Q psy1134 107 DIKTLI 112 (149)
Q Consensus 107 d~v~~~ 112 (149)
|.|++.
T Consensus 263 D~Iv~~ 268 (343)
T 2pjd_A 263 DMIISN 268 (343)
T ss_dssp EEEEEC
T ss_pred eEEEEC
Confidence 888775
No 156
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.96 E-value=6.9e-10 Score=81.45 Aligned_cols=57 Identities=18% Similarity=0.122 Sum_probs=46.3
Q ss_pred HHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc----CCeEEEEeCChhHHhhhhhhhc
Q psy1134 37 LIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ----AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 37 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~----~~~v~giD~s~~~i~~a~~~~~ 93 (149)
.+...+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++..
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~ 98 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLA 98 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHH
Confidence 45555555555446779999999999999999876 5789999999999999987653
No 157
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.96 E-value=3.2e-10 Score=83.38 Aligned_cols=88 Identities=14% Similarity=0.181 Sum_probs=62.8
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhccc---------CeeeccCCCCCcchhhHHHHhccc
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYFR---------NLCLQEVPTDFDIKTLIDTVLNEI 119 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~~---------~~~~~~~~~~~d~v~~~~~~l~~~ 119 (149)
.++.+|||||||+|.++.++. .+..|+|+|+|+.+++.+++++... +....+.+..+|.+++. .+++++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLll-k~lh~L 181 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIF-KLLPLL 181 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEE-SCHHHH
T ss_pred CCCCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHHH-HHHHHh
Confidence 467899999999999999988 6689999999999999999885321 22222355799999776 555555
Q ss_pred cchhHhhccCChhhHHHHHHhhhccC
Q psy1134 120 NFADKRARTMDLDDFVLLLATFNKHG 145 (149)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (149)
....+. ..+ +++..+++.+
T Consensus 182 E~q~~~------~~~-~ll~aL~~~~ 200 (253)
T 3frh_A 182 EREQAG------SAM-ALLQSLNTPR 200 (253)
T ss_dssp HHHSTT------HHH-HHHHHCBCSE
T ss_pred hhhchh------hHH-HHHHHhcCCC
Confidence 443222 122 6666666655
No 158
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.96 E-value=1.8e-09 Score=81.66 Aligned_cols=75 Identities=16% Similarity=0.218 Sum_probs=53.8
Q ss_pred HHHHHHHHcCCCCCCeEEEEcCCcchhH-HHHHhc-CCeEEEEeCChhHHhhhhhhhcc---cCeeecc------CCCCC
Q psy1134 38 IIQSIVDKGAIRPTDTVLEIGPGTGNMT-VKILEQ-AKKVIACEIDPSCKSYFPSLYYF---RNLCLQE------VPTDF 106 (149)
Q Consensus 38 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~-~~l~~~-~~~v~giD~s~~~i~~a~~~~~~---~~~~~~~------~~~~~ 106 (149)
+.+.....+.+.++++|||||||+|.++ ..+++. +.+|+|+|+|++|++.|++++.. .++.... ....|
T Consensus 110 l~~~E~~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~F 189 (298)
T 3fpf_A 110 LLKNEAALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEF 189 (298)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCC
T ss_pred HHHHHHHHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCc
Confidence 4444445677788999999999998766 445654 88999999999999999987542 2233221 13578
Q ss_pred cchhhH
Q psy1134 107 DIKTLI 112 (149)
Q Consensus 107 d~v~~~ 112 (149)
|.|++.
T Consensus 190 DvV~~~ 195 (298)
T 3fpf_A 190 DVLMVA 195 (298)
T ss_dssp SEEEEC
T ss_pred CEEEEC
Confidence 887653
No 159
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.95 E-value=9.7e-10 Score=80.84 Aligned_cols=58 Identities=16% Similarity=0.079 Sum_probs=46.3
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhhc
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~~ 93 (149)
+.....+...+...++++|||||||+|..+..+++. +.+|+++|+|+.+++.|++++.
T Consensus 49 ~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~ 109 (248)
T 3tfw_A 49 ANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQ 109 (248)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH
Confidence 433333333334456889999999999999999998 6799999999999999998763
No 160
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.95 E-value=2e-09 Score=77.58 Aligned_cols=60 Identities=15% Similarity=0.121 Sum_probs=51.3
Q ss_pred cCHHHHHHHHHHcC--CCCCCeEEEEcCCcchhHHHHHhc-C--CeEEEEeCChhHHhhhhhhhc
Q psy1134 34 KNPLIIQSIVDKGA--IRPTDTVLEIGPGTGNMTVKILEQ-A--KKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 34 ~~~~~~~~~~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~-~--~~v~giD~s~~~i~~a~~~~~ 93 (149)
.++.....++..+. ..++.+|||+|||+|..+..+++. + .+|+++|+|+.+++.++++..
T Consensus 59 ~~p~~~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~ 123 (226)
T 1i1n_A 59 SAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVR 123 (226)
T ss_dssp CCHHHHHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHH
Confidence 45777778888875 667889999999999999999987 3 699999999999999987753
No 161
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.95 E-value=1.2e-09 Score=84.12 Aligned_cols=57 Identities=18% Similarity=0.157 Sum_probs=47.3
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCC-eEEEEeCChhHHhhhhhhhc
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAK-KVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~i~~a~~~~~ 93 (149)
..+.+.+.+.+...++++|||||||+|.++..+++.+. +|+|+|+|+ |++.|++++.
T Consensus 50 ~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~ 107 (340)
T 2fyt_A 50 ESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIR 107 (340)
T ss_dssp HHHHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHH
T ss_pred HHHHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHH
Confidence 33556666666667889999999999999999999864 899999997 9999987753
No 162
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.95 E-value=1.6e-09 Score=79.77 Aligned_cols=59 Identities=15% Similarity=0.012 Sum_probs=46.7
Q ss_pred CHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhhc
Q psy1134 35 NPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 35 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~~ 93 (149)
.+.....+...+...++++|||||||+|..+..+++. +.+|+++|+|+.+++.|++++.
T Consensus 64 ~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~ 125 (247)
T 1sui_A 64 SADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIK 125 (247)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH
Confidence 3444444433344446789999999999999999987 6799999999999999998764
No 163
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.95 E-value=1.2e-09 Score=80.22 Aligned_cols=44 Identities=18% Similarity=0.217 Sum_probs=39.7
Q ss_pred CCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhc
Q psy1134 50 PTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~ 93 (149)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|+++..
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~ 110 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVE 110 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHH
Confidence 4679999999999999999877 6899999999999999998753
No 164
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.95 E-value=1.5e-09 Score=78.32 Aligned_cols=61 Identities=16% Similarity=0.248 Sum_probs=48.8
Q ss_pred ccCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhhc
Q psy1134 33 LKNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 33 ~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~~ 93 (149)
..++.....+...+...++++|||+|||+|..+..+++. +.+|+++|+|+.+++.|++++.
T Consensus 52 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~ 115 (229)
T 2avd_A 52 MMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWR 115 (229)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH
Confidence 344555555544444457889999999999999999986 5799999999999999998764
No 165
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.94 E-value=1.7e-09 Score=78.50 Aligned_cols=57 Identities=11% Similarity=0.195 Sum_probs=45.7
Q ss_pred HHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhhcc
Q psy1134 38 IIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 38 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~~~ 94 (149)
+...+....+..++.+|||||||+|..+..+++. +.+|+++|+|+++++.|++++..
T Consensus 44 ~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~ 103 (221)
T 3dr5_A 44 LLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFRE 103 (221)
T ss_dssp HHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH
Confidence 4444444445444559999999999999999985 57999999999999999988643
No 166
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.93 E-value=1e-09 Score=78.93 Aligned_cols=44 Identities=18% Similarity=0.160 Sum_probs=39.9
Q ss_pred CCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhc
Q psy1134 50 PTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~ 93 (149)
++.+|||||||+|.++..+++. +..|+|+|+|+.+++.|+++..
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~ 83 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVK 83 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHH
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHH
Confidence 5779999999999999999987 6799999999999999988753
No 167
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.93 E-value=1.1e-09 Score=79.93 Aligned_cols=53 Identities=13% Similarity=0.140 Sum_probs=44.3
Q ss_pred HHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC--CeEEEEeCChhHHhhhhhhhcc
Q psy1134 40 QSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA--KKVIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 40 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~i~~a~~~~~~ 94 (149)
+.+.+.++ ++.+|||||||+|.+++.+++.+ .+|+|+|+|+.+++.|++|+..
T Consensus 7 ~~l~~~v~--~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~ 61 (225)
T 3kr9_A 7 ELVASFVS--QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEA 61 (225)
T ss_dssp HHHHTTSC--TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHhCC--CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH
Confidence 34444444 57799999999999999999984 4899999999999999998643
No 168
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.93 E-value=1.4e-09 Score=79.32 Aligned_cols=59 Identities=17% Similarity=0.227 Sum_probs=49.8
Q ss_pred cCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhh
Q psy1134 34 KNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 34 ~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~ 92 (149)
..+.....+...+...++++|||||||+|..+..+++. +.+|+++|+|+.+++.|++++
T Consensus 44 ~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~ 105 (239)
T 2hnk_A 44 ISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYW 105 (239)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH
Confidence 44666666666665567889999999999999999987 579999999999999998875
No 169
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.93 E-value=1.8e-09 Score=84.78 Aligned_cols=60 Identities=12% Similarity=0.154 Sum_probs=47.5
Q ss_pred cCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcc
Q psy1134 34 KNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 34 ~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~ 94 (149)
.+++..+.++..+. .++++|||+|||+|.+++.+++.++.|+++|+|+.+++.|++|+..
T Consensus 199 ~dqr~~r~~l~~~~-~~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ 258 (393)
T 4dmg_A 199 LDQRENRRLFEAMV-RPGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALR 258 (393)
T ss_dssp GGGHHHHHHHHTTC-CTTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHh-cCCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHH
Confidence 34444444444332 2588999999999999999999988899999999999999988643
No 170
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.93 E-value=7.2e-10 Score=81.43 Aligned_cols=60 Identities=20% Similarity=0.221 Sum_probs=49.0
Q ss_pred cCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhhc
Q psy1134 34 KNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 34 ~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~~ 93 (149)
..+.....+...+...++++|||||||+|..+..+++. +.+|+++|+|+++++.|++++.
T Consensus 44 i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~ 106 (242)
T 3r3h_A 44 VAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWR 106 (242)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHH
T ss_pred cCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH
Confidence 44555555555555556789999999999999999985 5799999999999999998864
No 171
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.93 E-value=1.8e-09 Score=82.97 Aligned_cols=59 Identities=8% Similarity=-0.026 Sum_probs=48.4
Q ss_pred HHHHHHHHHHcC-CCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcc
Q psy1134 36 PLIIQSIVDKGA-IRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 36 ~~~~~~~~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~ 94 (149)
...+.++.+.+. ..++++|||+|||+|.+++.+++.+.+|+++|+|+.+++.|++++..
T Consensus 138 ~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~ 197 (332)
T 2igt_A 138 IVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVL 197 (332)
T ss_dssp HHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHH
Confidence 444455555553 34678999999999999999999888999999999999999988643
No 172
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.92 E-value=2.2e-09 Score=77.64 Aligned_cols=59 Identities=14% Similarity=0.264 Sum_probs=51.2
Q ss_pred cCHHHHHHHHHHc--CCCCCCeEEEEcCCcchhHHHHHhc-C-------CeEEEEeCChhHHhhhhhhh
Q psy1134 34 KNPLIIQSIVDKG--AIRPTDTVLEIGPGTGNMTVKILEQ-A-------KKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 34 ~~~~~~~~~~~~l--~~~~~~~vLDiGcG~G~~~~~l~~~-~-------~~v~giD~s~~~i~~a~~~~ 92 (149)
..+.+...+++.+ ...++.+|||+|||+|.++..+++. + .+|+++|+++.+++.+++++
T Consensus 66 ~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~ 134 (227)
T 1r18_A 66 SAPHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANL 134 (227)
T ss_dssp CCHHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHH
Confidence 4678888888888 4667889999999999999999886 4 49999999999999998775
No 173
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.92 E-value=7.3e-10 Score=79.65 Aligned_cols=67 Identities=18% Similarity=0.216 Sum_probs=50.1
Q ss_pred CCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhh-hcccCeee--ccC-CCCCcchhhHHHHhccccch
Q psy1134 51 TDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSL-YYFRNLCL--QEV-PTDFDIKTLIDTVLNEINFA 122 (149)
Q Consensus 51 ~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~-~~~~~~~~--~~~-~~~~d~v~~~~~~l~~~~~~ 122 (149)
+.+|||+|||+|.++..+++. +|+|+|+.+++.++++ ..+...+. ... ...||.|++. .++++++.+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~----~~vD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~v~~~-~~l~~~~~~ 118 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK----IGVEPSERMAEIARKRGVFVLKGTAENLPLKDESFDFALMV-TTICFVDDP 118 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC----EEEESCHHHHHHHHHTTCEEEECBTTBCCSCTTCEEEEEEE-SCGGGSSCH
T ss_pred CCcEEEeCCCCCHHHHHHHHH----hccCCCHHHHHHHHhcCCEEEEcccccCCCCCCCeeEEEEc-chHhhccCH
Confidence 779999999999999998866 9999999999999875 22111111 112 3579999887 788877543
No 174
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.92 E-value=1.7e-09 Score=83.54 Aligned_cols=81 Identities=17% Similarity=0.158 Sum_probs=60.3
Q ss_pred HHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhccc----Ceeec------cCCCCCc
Q psy1134 40 QSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYYFR----NLCLQ------EVPTDFD 107 (149)
Q Consensus 40 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~~~----~~~~~------~~~~~~d 107 (149)
..+++.++..++.+|||||||+|.++..+++. +.+++++|+ +.+++.+++++... ++... ..+..||
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D 250 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLPVTAD 250 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCCEE
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCCCCC
Confidence 45566666677889999999999999999988 569999999 99999998865321 22221 1234589
Q ss_pred chhhHHHHhccccch
Q psy1134 108 IKTLIDTVLNEINFA 122 (149)
Q Consensus 108 ~v~~~~~~l~~~~~~ 122 (149)
.+++. .++++.+++
T Consensus 251 ~v~~~-~vl~~~~~~ 264 (374)
T 1qzz_A 251 VVLLS-FVLLNWSDE 264 (374)
T ss_dssp EEEEE-SCGGGSCHH
T ss_pred EEEEe-ccccCCCHH
Confidence 88876 788776654
No 175
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.91 E-value=1.3e-09 Score=80.38 Aligned_cols=54 Identities=9% Similarity=0.055 Sum_probs=45.1
Q ss_pred HHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC--CeEEEEeCChhHHhhhhhhhcc
Q psy1134 39 IQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA--KKVIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 39 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~i~~a~~~~~~ 94 (149)
...+.+.++ ++.+|||||||+|.+++.+++.+ .+|+|+|+|+.+++.|++|+..
T Consensus 12 L~~i~~~v~--~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~ 67 (244)
T 3gnl_A 12 LEKVASYIT--KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRS 67 (244)
T ss_dssp HHHHHTTCC--SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHhCC--CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH
Confidence 344555555 57899999999999999999984 4799999999999999998643
No 176
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.91 E-value=1.6e-09 Score=76.44 Aligned_cols=47 Identities=19% Similarity=0.218 Sum_probs=41.1
Q ss_pred CCCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhhc
Q psy1134 47 AIRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 47 ~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~~ 93 (149)
...++++|||+|||+|.++..+++. ..+|+|+|+|+.+++.|++++.
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~ 68 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLT 68 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH
Confidence 3457889999999999999999987 2599999999999999988753
No 177
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.91 E-value=3.9e-09 Score=77.22 Aligned_cols=57 Identities=23% Similarity=0.241 Sum_probs=50.6
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhh
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~ 92 (149)
+.....++..+...++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~ 141 (258)
T 2pwy_A 82 PKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNV 141 (258)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHH
T ss_pred chHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHH
Confidence 445567888888888999999999999999999988 579999999999999998875
No 178
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.90 E-value=1.3e-09 Score=77.39 Aligned_cols=56 Identities=9% Similarity=0.186 Sum_probs=45.7
Q ss_pred HHHHHHHHcCCC---CCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhc
Q psy1134 38 IIQSIVDKGAIR---PTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 38 ~~~~~~~~l~~~---~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~ 93 (149)
+.+.++..+... ++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++..
T Consensus 50 ~~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~ 110 (207)
T 1jsx_A 50 LVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQH 110 (207)
T ss_dssp HHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHH
Confidence 455555555322 4789999999999999999987 6799999999999999988753
No 179
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.90 E-value=1.7e-09 Score=76.44 Aligned_cols=52 Identities=13% Similarity=0.137 Sum_probs=43.9
Q ss_pred HHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 38 IIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 38 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
+...++..++ ++ +|||+|||+|.++..+++.+.+|+|+|+|+.+++.++++.
T Consensus 20 ~l~~~~~~~~--~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~ 71 (202)
T 2kw5_A 20 FLVSVANQIP--QG-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLA 71 (202)
T ss_dssp SHHHHHHHSC--SS-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHH
T ss_pred HHHHHHHhCC--CC-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHH
Confidence 3444555554 45 9999999999999999999889999999999999998875
No 180
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.90 E-value=7.1e-10 Score=81.19 Aligned_cols=55 Identities=20% Similarity=0.037 Sum_probs=44.8
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc------CCeEEEEeCChhHHhhhhh
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ------AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~giD~s~~~i~~a~~ 90 (149)
+.....+...+...++++|||||||+|..+..+++. +.+|+|+|+|+.|++.|+.
T Consensus 67 p~~~~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~ 127 (236)
T 2bm8_A 67 PDTQAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS 127 (236)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc
Confidence 555555555554446789999999999999999886 6899999999999998863
No 181
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.90 E-value=1.5e-09 Score=87.16 Aligned_cols=74 Identities=18% Similarity=0.221 Sum_probs=54.7
Q ss_pred HHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC-CeEEEEeCChhHHhhhhhhhccc----Ceeec-------cCCCC
Q psy1134 38 IIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA-KKVIACEIDPSCKSYFPSLYYFR----NLCLQ-------EVPTD 105 (149)
Q Consensus 38 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~i~~a~~~~~~~----~~~~~-------~~~~~ 105 (149)
+.+.+++.+...++++|||||||+|.++..+++.+ .+|+|+|+|+ +++.|++++... ++... ..+..
T Consensus 146 ~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~ 224 (480)
T 3b3j_A 146 YQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQ 224 (480)
T ss_dssp HHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSC
T ss_pred HHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccCCC
Confidence 44556666666678899999999999999999884 5999999999 999988765322 22221 12357
Q ss_pred CcchhhH
Q psy1134 106 FDIKTLI 112 (149)
Q Consensus 106 ~d~v~~~ 112 (149)
||.|++.
T Consensus 225 fD~Ivs~ 231 (480)
T 3b3j_A 225 VDIIISE 231 (480)
T ss_dssp EEEEECC
T ss_pred eEEEEEe
Confidence 8888763
No 182
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.90 E-value=1.6e-09 Score=82.43 Aligned_cols=82 Identities=15% Similarity=0.156 Sum_probs=60.7
Q ss_pred HHHHHHHcCC--CCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhccc----Ceeec-------cCC
Q psy1134 39 IQSIVDKGAI--RPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYYFR----NLCLQ-------EVP 103 (149)
Q Consensus 39 ~~~~~~~l~~--~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~~~----~~~~~-------~~~ 103 (149)
...+++.++. .++.+|||+|||+|.++..+++. +.+|+++|+| .+++.++++.... ++... ..+
T Consensus 152 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 230 (335)
T 2r3s_A 152 AQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYG 230 (335)
T ss_dssp HHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCC
T ss_pred HHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCC
Confidence 4456666666 67889999999999999999988 6799999999 9999998764211 12211 123
Q ss_pred CCCcchhhHHHHhccccch
Q psy1134 104 TDFDIKTLIDTVLNEINFA 122 (149)
Q Consensus 104 ~~~d~v~~~~~~l~~~~~~ 122 (149)
..||.+++. +++++.+++
T Consensus 231 ~~~D~v~~~-~~l~~~~~~ 248 (335)
T 2r3s_A 231 NDYDLVLLP-NFLHHFDVA 248 (335)
T ss_dssp SCEEEEEEE-SCGGGSCHH
T ss_pred CCCcEEEEc-chhccCCHH
Confidence 458999877 788877543
No 183
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.90 E-value=1.9e-09 Score=81.85 Aligned_cols=58 Identities=16% Similarity=0.303 Sum_probs=51.3
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhc
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~ 93 (149)
+.+.+.+++.+.+.++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.|++++.
T Consensus 12 pvLl~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~ 71 (301)
T 1m6y_A 12 PVMVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLK 71 (301)
T ss_dssp CTTHHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTG
T ss_pred HHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH
Confidence 456677888888888899999999999999999988 5799999999999999998764
No 184
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.90 E-value=4.1e-09 Score=78.26 Aligned_cols=57 Identities=32% Similarity=0.413 Sum_probs=51.1
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhh
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~ 92 (149)
+.....++..+...++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|++++
T Consensus 85 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~ 144 (280)
T 1i9g_A 85 PKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNV 144 (280)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHH
Confidence 566677888888888999999999999999999986 679999999999999998875
No 185
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.90 E-value=4.5e-09 Score=79.66 Aligned_cols=44 Identities=20% Similarity=0.309 Sum_probs=39.9
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhh
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~ 92 (149)
.++++|||||||+|.++..+++. ..+|+++|+|+.+++.|++++
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~ 139 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHF 139 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHC
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHh
Confidence 46789999999999999999987 569999999999999998875
No 186
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.89 E-value=2.4e-09 Score=83.29 Aligned_cols=59 Identities=12% Similarity=0.056 Sum_probs=52.3
Q ss_pred CHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCC--eEEEEeCChhHHhhhhhhhcc
Q psy1134 35 NPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAK--KVIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 35 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~giD~s~~~i~~a~~~~~~ 94 (149)
.+.+...++... +.++.+|||+|||+|.+++.++..+. +|+|+|+|+.|++.|++++..
T Consensus 203 ~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~ 263 (373)
T 3tm4_A 203 KASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALA 263 (373)
T ss_dssp CHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHH
Confidence 577888888877 77888999999999999999999866 999999999999999988643
No 187
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.89 E-value=1.7e-09 Score=79.03 Aligned_cols=55 Identities=13% Similarity=0.082 Sum_probs=45.6
Q ss_pred HHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC--CeEEEEeCChhHHhhhhhhhcc
Q psy1134 38 IIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA--KKVIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 38 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~i~~a~~~~~~ 94 (149)
..+.+.+.++ ++.+|+|||||+|.+++.+++.+ .+|+|+|+|+.+++.|++|+..
T Consensus 11 RL~~i~~~v~--~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~ 67 (230)
T 3lec_A 11 RLQKVANYVP--KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSE 67 (230)
T ss_dssp HHHHHHTTSC--TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHhCC--CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH
Confidence 3344555555 57899999999999999999984 4799999999999999998653
No 188
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.89 E-value=3.6e-09 Score=81.54 Aligned_cols=61 Identities=18% Similarity=0.241 Sum_probs=54.4
Q ss_pred cCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC---CeEEEEeCChhHHhhhhhhhcc
Q psy1134 34 KNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA---KKVIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 34 ~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~giD~s~~~i~~a~~~~~~ 94 (149)
..+.+...++....+.++.+|||+|||+|.+++.++..+ .+|+|+|+|+.+++.|++|+..
T Consensus 187 l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~ 250 (354)
T 3tma_A 187 LTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALA 250 (354)
T ss_dssp CCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHH
Confidence 447788888888888888999999999999999999874 8999999999999999998653
No 189
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.89 E-value=3.7e-09 Score=77.29 Aligned_cols=59 Identities=17% Similarity=0.072 Sum_probs=46.3
Q ss_pred CHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhhc
Q psy1134 35 NPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 35 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~~ 93 (149)
.+.....+...+...++++|||||||+|..+..+++. +.+|+++|+|+.+++.|++++.
T Consensus 55 ~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~ 116 (237)
T 3c3y_A 55 SPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIR 116 (237)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH
Confidence 3444433333334446789999999999999999987 6799999999999999998764
No 190
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.89 E-value=1.7e-09 Score=79.14 Aligned_cols=44 Identities=18% Similarity=0.292 Sum_probs=38.3
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhh
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~ 92 (149)
.++.+|||||||+|.++..+++. +..|+|+|+|+.|++.|++++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~ 90 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRI 90 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHH
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHH
Confidence 35668999999999999999987 568999999999999987653
No 191
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.88 E-value=2.4e-09 Score=84.76 Aligned_cols=73 Identities=10% Similarity=0.124 Sum_probs=52.3
Q ss_pred cccccccccccccCHHHHHHHHHHcC-CCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcc
Q psy1134 22 IQFNKDFGQHILKNPLIIQSIVDKGA-IRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 22 ~~~~~~~g~~~~~~~~~~~~~~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~ 94 (149)
..+...-+..|..++...+.+...+. ..++++|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++..
T Consensus 261 ~~f~~~~~~F~q~n~~~~e~l~~~~~~~~~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ 334 (425)
T 2jjq_A 261 VDYLIHPNSFFQTNSYQAVNLVRKVSELVEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEI 334 (425)
T ss_dssp EEEEECTTSCCCSBHHHHHHHHHHHHHHCCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred EEEEEccccccccCHHHHHHHHHHhhccCCCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHH
Confidence 33333334333334444443333221 34678999999999999999999989999999999999999988653
No 192
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.88 E-value=3.9e-09 Score=80.14 Aligned_cols=45 Identities=24% Similarity=0.418 Sum_probs=40.4
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhc
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~ 93 (149)
.++++|||||||+|.++..+++. ..+|+++|+|+.+++.|++++.
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~ 140 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLP 140 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCH
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhH
Confidence 46789999999999999999987 3799999999999999998753
No 193
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.88 E-value=4.4e-09 Score=78.29 Aligned_cols=76 Identities=14% Similarity=0.257 Sum_probs=57.3
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhccc---Ceeecc------C-C
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYYFR---NLCLQE------V-P 103 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~~~---~~~~~~------~-~ 103 (149)
..+...+++.+. .++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++.... ++.... . .
T Consensus 96 e~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~~ 174 (276)
T 2b3t_A 96 ECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAG 174 (276)
T ss_dssp HHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTT
T ss_pred HHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhccc
Confidence 446677777776 56789999999999999999976 679999999999999999885321 222211 1 3
Q ss_pred CCCcchhhH
Q psy1134 104 TDFDIKTLI 112 (149)
Q Consensus 104 ~~~d~v~~~ 112 (149)
..||.|++.
T Consensus 175 ~~fD~Iv~n 183 (276)
T 2b3t_A 175 QQFAMIVSN 183 (276)
T ss_dssp CCEEEEEEC
T ss_pred CCccEEEEC
Confidence 578888763
No 194
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.88 E-value=4.9e-09 Score=81.29 Aligned_cols=82 Identities=16% Similarity=0.201 Sum_probs=62.1
Q ss_pred HHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhcc----cCeeec------cCCCCC
Q psy1134 39 IQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYYF----RNLCLQ------EVPTDF 106 (149)
Q Consensus 39 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~~----~~~~~~------~~~~~~ 106 (149)
...+.+.++..++.+|||+|||+|.++..+++. +.+++++|+ +.+++.+++++.. .++... ..+..|
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~~~ 269 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETIPDGA 269 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCSSC
T ss_pred HHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCCCCCc
Confidence 345666677777889999999999999999987 569999999 9999999876432 112221 233479
Q ss_pred cchhhHHHHhccccch
Q psy1134 107 DIKTLIDTVLNEINFA 122 (149)
Q Consensus 107 d~v~~~~~~l~~~~~~ 122 (149)
|.+++. +++++.+++
T Consensus 270 D~v~~~-~vlh~~~d~ 284 (369)
T 3gwz_A 270 DVYLIK-HVLHDWDDD 284 (369)
T ss_dssp SEEEEE-SCGGGSCHH
T ss_pred eEEEhh-hhhccCCHH
Confidence 999877 888877654
No 195
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.88 E-value=5.2e-09 Score=76.16 Aligned_cols=57 Identities=23% Similarity=0.154 Sum_probs=50.6
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
+.....+...+...++.+|||+|||+|.++..+++.+.+|+++|+|+.+++.|+++.
T Consensus 77 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~ 133 (248)
T 2yvl_A 77 PKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNL 133 (248)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHH
T ss_pred chhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHH
Confidence 455567778888788999999999999999999988889999999999999999875
No 196
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.87 E-value=4.4e-09 Score=80.13 Aligned_cols=82 Identities=20% Similarity=0.282 Sum_probs=60.4
Q ss_pred HHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhcc----cCeeec------cCCCC
Q psy1134 38 IIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYYF----RNLCLQ------EVPTD 105 (149)
Q Consensus 38 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~~----~~~~~~------~~~~~ 105 (149)
....+.+.++..+ .+|||+|||+|..+..+++. +.+++++|+ +.+++.+++++.. .++... ..+..
T Consensus 156 ~~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 233 (334)
T 2ip2_A 156 AFHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSN 233 (334)
T ss_dssp HHHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTCCCSS
T ss_pred HHHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCCCCCC
Confidence 3455666666666 89999999999999999987 568999999 9999999876421 122211 13457
Q ss_pred CcchhhHHHHhccccch
Q psy1134 106 FDIKTLIDTVLNEINFA 122 (149)
Q Consensus 106 ~d~v~~~~~~l~~~~~~ 122 (149)
||.+++. .++++.+++
T Consensus 234 ~D~v~~~-~vl~~~~~~ 249 (334)
T 2ip2_A 234 GDIYLLS-RIIGDLDEA 249 (334)
T ss_dssp CSEEEEE-SCGGGCCHH
T ss_pred CCEEEEc-hhccCCCHH
Confidence 9999877 788776544
No 197
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.87 E-value=4e-09 Score=79.11 Aligned_cols=44 Identities=30% Similarity=0.397 Sum_probs=40.1
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc-CCeEEEEeCChhHHhhhhhhh
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQ-AKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~~~ 92 (149)
.++++|||||||+|.++..+++. ..+|+++|+|+.+++.|++++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~ 118 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI 118 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH
Confidence 35789999999999999999988 469999999999999999876
No 198
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.87 E-value=2.7e-09 Score=81.85 Aligned_cols=80 Identities=13% Similarity=0.174 Sum_probs=59.0
Q ss_pred HHHHHcCCCC-CCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhccc----Ceee-------cc--CCC
Q psy1134 41 SIVDKGAIRP-TDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYYFR----NLCL-------QE--VPT 104 (149)
Q Consensus 41 ~~~~~l~~~~-~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~~~----~~~~-------~~--~~~ 104 (149)
.+++.++..+ +.+|||||||+|.++..+++. +.+++++|+ +.+++.++++.... .+.. .. .+.
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 247 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGG 247 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTC
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCC
Confidence 4555666656 789999999999999999987 579999999 88999988764221 1211 11 345
Q ss_pred CCcchhhHHHHhccccch
Q psy1134 105 DFDIKTLIDTVLNEINFA 122 (149)
Q Consensus 105 ~~d~v~~~~~~l~~~~~~ 122 (149)
.||.+++. .++++.+++
T Consensus 248 ~~D~v~~~-~vlh~~~~~ 264 (352)
T 3mcz_A 248 AADVVMLN-DCLHYFDAR 264 (352)
T ss_dssp CEEEEEEE-SCGGGSCHH
T ss_pred CccEEEEe-cccccCCHH
Confidence 69999887 788877654
No 199
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.87 E-value=2.2e-09 Score=79.53 Aligned_cols=53 Identities=11% Similarity=0.154 Sum_probs=45.3
Q ss_pred HHHHcCCCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhcc
Q psy1134 42 IVDKGAIRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 42 ~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~~ 94 (149)
+...+...++.+|||+|||+|.++..++++ +.+|+|+|+++.+++.|++++..
T Consensus 28 L~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~ 82 (260)
T 2ozv_A 28 LASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLEL 82 (260)
T ss_dssp HHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTS
T ss_pred HHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHh
Confidence 344556667889999999999999999988 46999999999999999988654
No 200
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.87 E-value=3.8e-09 Score=82.59 Aligned_cols=75 Identities=12% Similarity=0.108 Sum_probs=54.1
Q ss_pred hhcccccccc----cccccCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC-CeEEEEeCChhHHhhhhhhhcc
Q psy1134 20 ICIQFNKDFG----QHILKNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA-KKVIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 20 ~~~~~~~~~g----~~~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~i~~a~~~~~~ 94 (149)
.+..+..... ..|+.+++..+.++...- .++++|||+|||+|.+++.+++.+ .+|+|+|+|+.+++.|++|+..
T Consensus 179 ~g~~f~v~~~~~~~t~ff~~~~~~~~~~~~~~-~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~ 257 (385)
T 2b78_A 179 NGISYNVFLNDGLMTGIFLDQRQVRNELINGS-AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEA 257 (385)
T ss_dssp TTEEEEECSSSSSCCSSCGGGHHHHHHHHHTT-TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHH
T ss_pred CCEEEEEeccccccCCcCCcHHHHHHHHHHHh-cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH
Confidence 4445544443 123355554444544432 468899999999999999999875 4899999999999999998754
Q ss_pred c
Q psy1134 95 R 95 (149)
Q Consensus 95 ~ 95 (149)
.
T Consensus 258 n 258 (385)
T 2b78_A 258 N 258 (385)
T ss_dssp T
T ss_pred c
Confidence 3
No 201
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.87 E-value=2.9e-09 Score=79.32 Aligned_cols=54 Identities=26% Similarity=0.312 Sum_probs=43.9
Q ss_pred HHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhhc
Q psy1134 40 QSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 40 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~~ 93 (149)
..++..+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++.
T Consensus 100 ~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~ 156 (275)
T 1yb2_A 100 SYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLS 156 (275)
T ss_dssp ------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHH
Confidence 45666777778899999999999999999987 6899999999999999988764
No 202
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.87 E-value=3.4e-09 Score=81.55 Aligned_cols=81 Identities=17% Similarity=0.125 Sum_probs=59.2
Q ss_pred HHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhccc----Ceeecc------CCCCCc
Q psy1134 40 QSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYYFR----NLCLQE------VPTDFD 107 (149)
Q Consensus 40 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~~~----~~~~~~------~~~~~d 107 (149)
..+++.++..++.+|||+|||+|.++..+++. ..+++++|+ +.+++.+++++... ++.... .+..||
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D 251 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKAD 251 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSSCEE
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCCCcc
Confidence 44556667677889999999999999999987 468999999 99999998875321 222211 234588
Q ss_pred chhhHHHHhccccch
Q psy1134 108 IKTLIDTVLNEINFA 122 (149)
Q Consensus 108 ~v~~~~~~l~~~~~~ 122 (149)
.+++. .++++.+++
T Consensus 252 ~v~~~-~vl~~~~~~ 265 (360)
T 1tw3_A 252 AIILS-FVLLNWPDH 265 (360)
T ss_dssp EEEEE-SCGGGSCHH
T ss_pred EEEEc-ccccCCCHH
Confidence 88776 777776543
No 203
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.86 E-value=3.8e-09 Score=79.07 Aligned_cols=43 Identities=28% Similarity=0.456 Sum_probs=39.6
Q ss_pred CCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~ 92 (149)
++++|||||||+|.++..+++. ..+|+++|+|+.+++.|++++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~ 119 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFL 119 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHC
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHh
Confidence 5789999999999999999987 479999999999999999875
No 204
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.86 E-value=2e-09 Score=80.86 Aligned_cols=75 Identities=19% Similarity=0.268 Sum_probs=54.4
Q ss_pred HhhcccccccccccccC--HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC-CeEEEEeCChhHHhhhhhhhccc
Q psy1134 19 KICIQFNKDFGQHILKN--PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA-KKVIACEIDPSCKSYFPSLYYFR 95 (149)
Q Consensus 19 ~~~~~~~~~~g~~~~~~--~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~i~~a~~~~~~~ 95 (149)
+++..+.......++.. ..-..++.+.+. +|++|||+|||+|.+++.++..+ .+|+++|+||.+++.+++|+...
T Consensus 94 E~G~~~~~D~~k~~f~~~~~~er~ri~~~~~--~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N 171 (278)
T 3k6r_A 94 ENGIKYKLDVAKIMFSPANVKERVRMAKVAK--PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLN 171 (278)
T ss_dssp ETTEEEEEETTTSCCCGGGHHHHHHHHHHCC--TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHT
T ss_pred ECCEEEEEeccceEEcCCcHHHHHHHHHhcC--CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHc
Confidence 44444444443333222 334455656554 68999999999999999999885 68999999999999999987543
No 205
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.86 E-value=3.5e-09 Score=76.39 Aligned_cols=57 Identities=18% Similarity=0.313 Sum_probs=45.2
Q ss_pred HHHHHHHHHHc---CCCCCCeEEEEcCCcchhHHHHHhc-C--CeEEEEeCChhHHhhhhhhh
Q psy1134 36 PLIIQSIVDKG---AIRPTDTVLEIGPGTGNMTVKILEQ-A--KKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 36 ~~~~~~~~~~l---~~~~~~~vLDiGcG~G~~~~~l~~~-~--~~v~giD~s~~~i~~a~~~~ 92 (149)
+.....++..+ ...++.+|||+|||+|.++..+++. + .+|+|+|+|+.+++.++++.
T Consensus 56 ~~~~~~i~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~ 118 (227)
T 1g8a_A 56 SKLGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIV 118 (227)
T ss_dssp CHHHHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHH
T ss_pred hhHHHHHHhhHHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHH
Confidence 34445563333 3567889999999999999999987 3 79999999999998887664
No 206
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.86 E-value=2.7e-09 Score=76.18 Aligned_cols=45 Identities=13% Similarity=0.138 Sum_probs=40.3
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhhc
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~~ 93 (149)
.++++|||+|||+|..+..+++. +.+|+++|+|+.+++.|++++.
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~ 102 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLH 102 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH
Confidence 35779999999999999999987 5799999999999999988753
No 207
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.86 E-value=5.5e-09 Score=80.54 Aligned_cols=82 Identities=12% Similarity=0.213 Sum_probs=59.8
Q ss_pred HHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhccc---C-eeecc------CCCC
Q psy1134 38 IIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYYFR---N-LCLQE------VPTD 105 (149)
Q Consensus 38 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~~~---~-~~~~~------~~~~ 105 (149)
....+++.++..++.+|||||||+|.++..+++. +.+|+++|+ +.+++.+++++... + +.... ....
T Consensus 178 ~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 256 (359)
T 1x19_A 178 AIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPE 256 (359)
T ss_dssp HHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCC
T ss_pred hHHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCC
Confidence 4456667777778889999999999999999988 569999999 99999998775321 1 22211 1123
Q ss_pred CcchhhHHHHhccccc
Q psy1134 106 FDIKTLIDTVLNEINF 121 (149)
Q Consensus 106 ~d~v~~~~~~l~~~~~ 121 (149)
.|.+++. .++++.++
T Consensus 257 ~D~v~~~-~vlh~~~d 271 (359)
T 1x19_A 257 ADAVLFC-RILYSANE 271 (359)
T ss_dssp CSEEEEE-SCGGGSCH
T ss_pred CCEEEEe-chhccCCH
Confidence 4777766 77776654
No 208
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.85 E-value=7.8e-09 Score=77.59 Aligned_cols=46 Identities=20% Similarity=0.369 Sum_probs=40.8
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhc
Q psy1134 48 IRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~ 93 (149)
..++++|||||||+|.++..+++. ..+|+++|+|+.+++.|++++.
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~ 123 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFK 123 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCT
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhH
Confidence 346789999999999999999987 4799999999999999998764
No 209
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.85 E-value=6.3e-09 Score=80.83 Aligned_cols=58 Identities=17% Similarity=0.163 Sum_probs=48.5
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcc
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~ 94 (149)
..+..++.+.+... +++|||+|||+|.+++.+++.+.+|+|+|+|+.+++.|++|+..
T Consensus 200 ~~l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~ 257 (369)
T 3bt7_A 200 IQMLEWALDVTKGS-KGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAA 257 (369)
T ss_dssp HHHHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHH
Confidence 34555666666643 67899999999999999998888999999999999999988643
No 210
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.85 E-value=1.4e-09 Score=81.54 Aligned_cols=47 Identities=19% Similarity=0.222 Sum_probs=37.7
Q ss_pred HHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhh
Q psy1134 40 QSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYF 88 (149)
Q Consensus 40 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a 88 (149)
.++.+.....++.+|||+|||+|.++..+++. .+|+|+|+|+ |+..+
T Consensus 72 ~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~-m~~~a 118 (276)
T 2wa2_A 72 AWIDERGGVELKGTVVDLGCGRGSWSYYAASQ-PNVREVKAYT-LGTSG 118 (276)
T ss_dssp HHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS-TTEEEEEEEC-CCCTT
T ss_pred HHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc-CCEEEEECch-hhhhh
Confidence 44445444457889999999999999999998 8999999999 65443
No 211
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.85 E-value=5.6e-09 Score=82.99 Aligned_cols=71 Identities=20% Similarity=0.207 Sum_probs=59.5
Q ss_pred ccccccccccccCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc---------------CCeEEEEeCChhHHhh
Q psy1134 23 QFNKDFGQHILKNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ---------------AKKVIACEIDPSCKSY 87 (149)
Q Consensus 23 ~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---------------~~~v~giD~s~~~i~~ 87 (149)
..++..|++| ++..+.+.|.+.+.+.++.+|||+|||+|.++..+++. ..+++|+|+++.+++.
T Consensus 145 ~~~~~~G~fy-TP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~l 223 (445)
T 2okc_A 145 DKKSGAGQYF-TPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTL 223 (445)
T ss_dssp CTTTCCGGGC-CCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHH
T ss_pred hccccCCccc-CcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHH
Confidence 3445566655 88899999999998888889999999999999988764 3689999999999999
Q ss_pred hhhhhcc
Q psy1134 88 FPSLYYF 94 (149)
Q Consensus 88 a~~~~~~ 94 (149)
|+.++..
T Consensus 224 A~~nl~l 230 (445)
T 2okc_A 224 ASMNLYL 230 (445)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9987643
No 212
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.85 E-value=2.9e-09 Score=82.39 Aligned_cols=72 Identities=18% Similarity=0.246 Sum_probs=54.4
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhccc----Cee-----ecc----CCCCCcchhhHH
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYYFR----NLC-----LQE----VPTDFDIKTLID 113 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~~~----~~~-----~~~----~~~~~d~v~~~~ 113 (149)
..+.+|||||||+|.++..+++. +.+|+++|+ +.+++.|++++... ++. ... .+..||.+++.
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~- 255 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMS- 255 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEE-
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEe-
Confidence 45679999999999999999986 568999999 99999998764321 121 111 34679998877
Q ss_pred HHhccccch
Q psy1134 114 TVLNEINFA 122 (149)
Q Consensus 114 ~~l~~~~~~ 122 (149)
.++++.+++
T Consensus 256 ~vlh~~~~~ 264 (363)
T 3dp7_A 256 QFLDCFSEE 264 (363)
T ss_dssp SCSTTSCHH
T ss_pred chhhhCCHH
Confidence 777776654
No 213
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.84 E-value=5.1e-09 Score=80.09 Aligned_cols=58 Identities=31% Similarity=0.450 Sum_probs=51.0
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc-C--CeEEEEeCChhHHhhhhhhhc
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ-A--KKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~--~~v~giD~s~~~i~~a~~~~~ 93 (149)
+.....++..+...++.+|||+|||+|.++..+++. + .+|+|+|+++.+++.|++++.
T Consensus 91 ~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~ 151 (336)
T 2b25_A 91 PKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYK 151 (336)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHH
Confidence 555677788888888999999999999999999987 4 799999999999999998764
No 214
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.84 E-value=2e-09 Score=82.10 Aligned_cols=75 Identities=13% Similarity=0.123 Sum_probs=56.5
Q ss_pred cCCCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhcc----cCeee------ccCCCCCcchhhHH
Q psy1134 46 GAIRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYYF----RNLCL------QEVPTDFDIKTLID 113 (149)
Q Consensus 46 l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~~----~~~~~------~~~~~~~d~v~~~~ 113 (149)
++..+..+|||+|||+|.++..+++. +.+++++|+ +.+++.+++++.. .++.. ...+..||.+++.
T Consensus 165 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~~~D~v~~~- 242 (332)
T 3i53_A 165 YDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPAGAGGYVLS- 242 (332)
T ss_dssp SCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCSCSEEEEE-
T ss_pred CCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCCCCcEEEEe-
Confidence 34445679999999999999999886 568999999 9999999876432 11222 1233479999887
Q ss_pred HHhccccch
Q psy1134 114 TVLNEINFA 122 (149)
Q Consensus 114 ~~l~~~~~~ 122 (149)
+++++.+++
T Consensus 243 ~vlh~~~~~ 251 (332)
T 3i53_A 243 AVLHDWDDL 251 (332)
T ss_dssp SCGGGSCHH
T ss_pred hhhccCCHH
Confidence 888888764
No 215
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.84 E-value=3e-09 Score=81.42 Aligned_cols=56 Identities=21% Similarity=0.299 Sum_probs=45.3
Q ss_pred HHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC-CeEEEEeCChhHHhhhhhhhc
Q psy1134 37 LIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA-KKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 37 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~i~~a~~~~~ 93 (149)
.+...+.+.+...++++|||+|||+|.++..+++.+ .+|+|+|+| .|++.|++++.
T Consensus 25 ~y~~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~ 81 (328)
T 1g6q_1 25 SYRNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVE 81 (328)
T ss_dssp HHHHHHHHHHHHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHH
T ss_pred HHHHHHHhhHhhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHH
Confidence 355556555555578899999999999999999885 489999999 59999887753
No 216
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.84 E-value=5.9e-09 Score=75.83 Aligned_cols=58 Identities=24% Similarity=0.311 Sum_probs=45.8
Q ss_pred CHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhh
Q psy1134 35 NPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 35 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~ 92 (149)
.+.....+...+...++++|||+|||+|..+..+++. +.+|+++|+|+.+++.|++++
T Consensus 57 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~ 117 (232)
T 3cbg_A 57 SPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYW 117 (232)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH
Confidence 3444444444343346789999999999999999987 469999999999999998875
No 217
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.84 E-value=7.4e-09 Score=79.60 Aligned_cols=44 Identities=23% Similarity=0.409 Sum_probs=40.1
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhh
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~ 92 (149)
.++++|||||||+|.++..+++. ..+|+++|+|+.+++.|++++
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~ 164 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFF 164 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHC
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHH
Confidence 46789999999999999999987 579999999999999999875
No 218
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.84 E-value=2.3e-09 Score=82.74 Aligned_cols=74 Identities=20% Similarity=0.257 Sum_probs=52.2
Q ss_pred HHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCC-eEEEEeCChhHHhhhhhhhcccC----eeec-------cC-CC
Q psy1134 38 IIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAK-KVIACEIDPSCKSYFPSLYYFRN----LCLQ-------EV-PT 104 (149)
Q Consensus 38 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~i~~a~~~~~~~~----~~~~-------~~-~~ 104 (149)
+...+.......++++|||+|||+|.++..+++.+. +|+|+|+|+ |++.|+++....+ +... .. ..
T Consensus 54 ~~~~i~~~~~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 132 (349)
T 3q7e_A 54 YRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVE 132 (349)
T ss_dssp HHHHHHTCHHHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSS
T ss_pred HHHHHHhccccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCC
Confidence 334444333344788999999999999999999854 999999995 9999988754222 2221 12 26
Q ss_pred CCcchhhH
Q psy1134 105 DFDIKTLI 112 (149)
Q Consensus 105 ~~d~v~~~ 112 (149)
.||.|++.
T Consensus 133 ~fD~Iis~ 140 (349)
T 3q7e_A 133 KVDIIISE 140 (349)
T ss_dssp CEEEEEEC
T ss_pred ceEEEEEc
Confidence 78888763
No 219
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.84 E-value=3.3e-09 Score=77.70 Aligned_cols=43 Identities=19% Similarity=0.325 Sum_probs=38.5
Q ss_pred CCCeEEEEcCCcchhHHHHHhcC--CeEEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGPGTGNMTVKILEQA--KKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~i~~a~~~~ 92 (149)
++.+|||||||+|.++..+++.+ ..|+|+|+|+.+++.+++++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~ 93 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRI 93 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHH
Confidence 56789999999999999999884 58999999999999998764
No 220
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.83 E-value=9.2e-09 Score=76.54 Aligned_cols=58 Identities=21% Similarity=0.209 Sum_probs=49.9
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhhc
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~~ 93 (149)
+.-...++..+...++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|++++.
T Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~ 158 (277)
T 1o54_A 98 PKDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLT 158 (277)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHH
Confidence 344456777788888999999999999999999987 5799999999999999988753
No 221
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.82 E-value=6.5e-09 Score=79.45 Aligned_cols=45 Identities=20% Similarity=0.391 Sum_probs=40.5
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhc
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~ 93 (149)
.++++|||||||+|.++..+++. +.+|+++|+|+.+++.|++++.
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~ 161 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFK 161 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCT
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHH
Confidence 35689999999999999999987 5799999999999999998764
No 222
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.82 E-value=7.2e-09 Score=75.90 Aligned_cols=52 Identities=19% Similarity=0.266 Sum_probs=43.2
Q ss_pred HHHHHHHHHHcC---CCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhh
Q psy1134 36 PLIIQSIVDKGA---IRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSY 87 (149)
Q Consensus 36 ~~~~~~~~~~l~---~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~ 87 (149)
++....++..+. +.++.+|||+|||+|.++..+++. ..+|+|+|+|+.|++.
T Consensus 59 skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~ 116 (232)
T 3id6_C 59 SKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRE 116 (232)
T ss_dssp CHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHH
T ss_pred HHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHH
Confidence 556677777665 678999999999999999999987 4599999999988643
No 223
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.82 E-value=6.6e-09 Score=78.51 Aligned_cols=43 Identities=28% Similarity=0.414 Sum_probs=39.5
Q ss_pred CCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~ 92 (149)
++++|||||||+|.++..+++. ..+|+++|+|+.+++.|++++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~ 134 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYL 134 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHC
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHh
Confidence 5689999999999999999987 479999999999999999875
No 224
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.80 E-value=4e-09 Score=78.33 Aligned_cols=50 Identities=16% Similarity=0.024 Sum_probs=42.9
Q ss_pred HHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCCh-------hHHhhhhhhh
Q psy1134 43 VDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDP-------SCKSYFPSLY 92 (149)
Q Consensus 43 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~-------~~i~~a~~~~ 92 (149)
...+...++.+|||+|||+|..++.+++.+.+|+|+|+|+ .+++.|+++.
T Consensus 76 ~~a~~~~~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~ 132 (258)
T 2r6z_A 76 AKAVNHTAHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNP 132 (258)
T ss_dssp HHHTTGGGCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSH
T ss_pred HHHhCcCCcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHH
Confidence 3344444678999999999999999999989999999999 9999988764
No 225
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.80 E-value=7.6e-09 Score=78.78 Aligned_cols=45 Identities=20% Similarity=0.268 Sum_probs=40.3
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhc
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~ 93 (149)
.++++|||||||+|.++..+++. +.+|+++|+|+.+++.|++++.
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~ 122 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMP 122 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhH
Confidence 35689999999999999999987 5799999999999999998753
No 226
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.80 E-value=3.1e-09 Score=79.27 Aligned_cols=47 Identities=15% Similarity=0.234 Sum_probs=38.0
Q ss_pred HHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhh
Q psy1134 39 IQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSY 87 (149)
Q Consensus 39 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~ 87 (149)
..++.+.....++.+|||+|||+|.++..+++. .+|+|+|+++ |+..
T Consensus 63 L~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~-m~~~ 109 (265)
T 2oxt_A 63 LAWMEERGYVELTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYT-LGVG 109 (265)
T ss_dssp HHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS-TTEEEEEEEC-CCCS
T ss_pred HHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc-CcEEEEECch-hhhh
Confidence 345555544457889999999999999999998 8999999999 6443
No 227
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.79 E-value=4.8e-09 Score=80.54 Aligned_cols=51 Identities=24% Similarity=0.378 Sum_probs=43.1
Q ss_pred HHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcc
Q psy1134 41 SIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 41 ~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~ 94 (149)
++...+ .++++|||+|||+|.++.. ++.+.+|+|+|+|+.+++.|++|+..
T Consensus 188 ~i~~~~--~~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~ 238 (336)
T 2yx1_A 188 RIMKKV--SLNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKL 238 (336)
T ss_dssp HHHHHC--CTTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHhc--CCCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHH
Confidence 344444 3688999999999999999 88778999999999999999988654
No 228
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.79 E-value=1.8e-08 Score=74.32 Aligned_cols=64 Identities=19% Similarity=0.194 Sum_probs=48.4
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhc---c--cCeeecc-CCCCCcchhhH
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYY---F--RNLCLQE-VPTDFDIKTLI 112 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~---~--~~~~~~~-~~~~~d~v~~~ 112 (149)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++.. + .+..... ....||.|++.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 155 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRI 155 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEe
Confidence 46789999999999999999987 6799999999999999987642 1 1111111 22578888763
No 229
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.78 E-value=1.1e-08 Score=77.98 Aligned_cols=44 Identities=30% Similarity=0.446 Sum_probs=40.1
Q ss_pred CCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhc
Q psy1134 50 PTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~ 93 (149)
++++|||||||+|.++..+++. ..+|+++|+|+.+++.|++++.
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~ 153 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLP 153 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHH
Confidence 5689999999999999999987 5799999999999999998763
No 230
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.76 E-value=1.5e-08 Score=73.40 Aligned_cols=47 Identities=21% Similarity=0.280 Sum_probs=38.3
Q ss_pred HcCCCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhh
Q psy1134 45 KGAIRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 45 ~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~ 91 (149)
.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+.++
T Consensus 72 ~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~ 121 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINL 121 (233)
T ss_dssp CCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHH
T ss_pred eecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHH
Confidence 445567889999999999999999987 37999999998866655443
No 231
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.76 E-value=1.9e-08 Score=78.75 Aligned_cols=54 Identities=13% Similarity=0.077 Sum_probs=44.8
Q ss_pred HHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC-CeEEEEeCChhHHhhhhhhhccc
Q psy1134 40 QSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA-KKVIACEIDPSCKSYFPSLYYFR 95 (149)
Q Consensus 40 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~i~~a~~~~~~~ 95 (149)
..++..+ .++++|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++|+...
T Consensus 212 ~~~l~~~--~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~n 266 (396)
T 3c0k_A 212 RLATRRY--VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELN 266 (396)
T ss_dssp HHHHHHH--CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHHHh--hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc
Confidence 3344444 468899999999999999999984 69999999999999999886543
No 232
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.75 E-value=1.9e-08 Score=75.95 Aligned_cols=58 Identities=16% Similarity=0.170 Sum_probs=51.7
Q ss_pred CHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhc
Q psy1134 35 NPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 35 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~ 93 (149)
...+.++++.... .+++.|||++||+|.++..+++.+.+++|+|+++.+++.|++++.
T Consensus 221 p~~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~~ 278 (297)
T 2zig_A 221 PLELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERFA 278 (297)
T ss_dssp CHHHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHH
Confidence 4678888888776 578899999999999999999999999999999999999998864
No 233
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.75 E-value=1.1e-08 Score=80.11 Aligned_cols=60 Identities=8% Similarity=0.082 Sum_probs=51.8
Q ss_pred CHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC----------------------------------------Ce
Q psy1134 35 NPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA----------------------------------------KK 74 (149)
Q Consensus 35 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~----------------------------------------~~ 74 (149)
.+.++..++....+.++.+|||+|||+|.+++.++..+ .+
T Consensus 180 ~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 259 (385)
T 3ldu_A 180 RETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFK 259 (385)
T ss_dssp CHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCC
T ss_pred cHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCce
Confidence 36688888888888888999999999999999987662 46
Q ss_pred EEEEeCChhHHhhhhhhhcc
Q psy1134 75 VIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 75 v~giD~s~~~i~~a~~~~~~ 94 (149)
|+|+|+|+.+++.|++|+..
T Consensus 260 V~GvDid~~ai~~Ar~Na~~ 279 (385)
T 3ldu_A 260 IYGYDIDEESIDIARENAEI 279 (385)
T ss_dssp EEEEESCHHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHH
Confidence 99999999999999998643
No 234
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.74 E-value=1.1e-08 Score=78.02 Aligned_cols=88 Identities=11% Similarity=0.107 Sum_probs=58.0
Q ss_pred CeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhccc---Ceeecc---------C-CCCCcchhhHHHHh
Q psy1134 52 DTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYYFR---NLCLQE---------V-PTDFDIKTLIDTVL 116 (149)
Q Consensus 52 ~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~~~---~~~~~~---------~-~~~~d~v~~~~~~l 116 (149)
.+|||||||+|.++..+++. +.+|++||+|+.+++.|++++... ++.+.. . ...||.|++- ..
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D--~~ 168 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRD--VF 168 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEEC--CS
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEEC--CC
Confidence 39999999999999999984 679999999999999999886432 232221 1 3578888652 22
Q ss_pred ccccchhHhhccCChhhHHHHHHhhhccC
Q psy1134 117 NEINFADKRARTMDLDDFVLLLATFNKHG 145 (149)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (149)
... .....+...+|+..+...-+.|
T Consensus 169 ~~~----~~~~~L~t~efl~~~~r~Lkpg 193 (317)
T 3gjy_A 169 AGA----ITPQNFTTVEFFEHCHRGLAPG 193 (317)
T ss_dssp TTS----CCCGGGSBHHHHHHHHHHEEEE
T ss_pred Ccc----ccchhhhHHHHHHHHHHhcCCC
Confidence 211 1122334466666665544333
No 235
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.73 E-value=1.9e-08 Score=77.95 Aligned_cols=81 Identities=19% Similarity=0.214 Sum_probs=56.8
Q ss_pred HHHHHHcC-CCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhh--hcccCeeec-cCCCCCcchhhHH
Q psy1134 40 QSIVDKGA-IRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSL--YYFRNLCLQ-EVPTDFDIKTLID 113 (149)
Q Consensus 40 ~~~~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~--~~~~~~~~~-~~~~~~d~v~~~~ 113 (149)
..++..++ ..++.+|||||||+|.++..+++. ..+++++|+ +.+++.+++. ..+...+.. ..+. +|.+++.
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~~~~-~D~v~~~- 274 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPLSGIEHVGGDMFASVPQ-GDAMILK- 274 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCTTTCCCC-EEEEEEE-
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhcCCCEEEeCCcccCCCC-CCEEEEe-
Confidence 34455554 556789999999999999999988 457889999 9999998753 111111111 1223 8888877
Q ss_pred HHhccccchh
Q psy1134 114 TVLNEINFAD 123 (149)
Q Consensus 114 ~~l~~~~~~~ 123 (149)
.++++.+++.
T Consensus 275 ~~lh~~~d~~ 284 (372)
T 1fp1_D 275 AVCHNWSDEK 284 (372)
T ss_dssp SSGGGSCHHH
T ss_pred cccccCCHHH
Confidence 8888877643
No 236
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.73 E-value=2.3e-08 Score=78.19 Aligned_cols=62 Identities=16% Similarity=0.168 Sum_probs=49.3
Q ss_pred cccCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC-CeEEEEeCChhHHhhhhhhhcc
Q psy1134 32 ILKNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA-KKVIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 32 ~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~giD~s~~~i~~a~~~~~~ 94 (149)
|+.++.....++..+. .++++|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++..
T Consensus 200 ~f~~~~~~~~~~~~~~-~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~ 262 (396)
T 2as0_A 200 FFLDQRENRLALEKWV-QPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKL 262 (396)
T ss_dssp CCSTTHHHHHHHGGGC-CTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHh-hCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 4445555555555442 368899999999999999999984 5999999999999999988653
No 237
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.72 E-value=1e-08 Score=70.21 Aligned_cols=45 Identities=24% Similarity=0.542 Sum_probs=36.8
Q ss_pred HHHHcC-CCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhh
Q psy1134 42 IVDKGA-IRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSY 87 (149)
Q Consensus 42 ~~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~ 87 (149)
+...+. ..++.+|||+|||+|.++..+++. +.+|+|+|+|+ +++.
T Consensus 13 ~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~ 61 (180)
T 1ej0_A 13 IQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI 61 (180)
T ss_dssp HHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC
T ss_pred HHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc
Confidence 344443 457889999999999999999887 37999999999 7765
No 238
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.72 E-value=1.6e-08 Score=79.29 Aligned_cols=60 Identities=12% Similarity=0.093 Sum_probs=52.0
Q ss_pred CHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC----------------------------------------Ce
Q psy1134 35 NPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA----------------------------------------KK 74 (149)
Q Consensus 35 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~----------------------------------------~~ 74 (149)
.+.++..++....+.++..|||++||+|.+++.++..+ .+
T Consensus 186 ~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 265 (393)
T 3k0b_A 186 KETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLN 265 (393)
T ss_dssp CHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC
T ss_pred cHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCce
Confidence 47788888899998888999999999999999887652 35
Q ss_pred EEEEeCChhHHhhhhhhhcc
Q psy1134 75 VIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 75 v~giD~s~~~i~~a~~~~~~ 94 (149)
|+|+|+|+.|++.|++|+..
T Consensus 266 V~GvDid~~al~~Ar~Na~~ 285 (393)
T 3k0b_A 266 IIGGDIDARLIEIAKQNAVE 285 (393)
T ss_dssp EEEEESCHHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHH
Confidence 99999999999999998653
No 239
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.72 E-value=2.1e-08 Score=77.04 Aligned_cols=67 Identities=13% Similarity=0.088 Sum_probs=50.7
Q ss_pred cccccccccCHHHHHHHH---HHc-CCCCCCeEEEEcCCcchhHHHHHhcC-------CeEEEEeCChhHHhhhhhhhc
Q psy1134 26 KDFGQHILKNPLIIQSIV---DKG-AIRPTDTVLEIGPGTGNMTVKILEQA-------KKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 26 ~~~g~~~~~~~~~~~~~~---~~l-~~~~~~~vLDiGcG~G~~~~~l~~~~-------~~v~giD~s~~~i~~a~~~~~ 93 (149)
...|++| ++......+. ..+ ...++.+|||+|||+|.++..+++.. .+|+|+|+++.+++.|+.++.
T Consensus 103 ~~~g~~~-TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~ 180 (344)
T 2f8l_A 103 IQVNHQM-TPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGAD 180 (344)
T ss_dssp CCGGGCC-CCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHH
T ss_pred cccCcCC-ChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHH
Confidence 4556665 6665544433 333 44466799999999999999988762 689999999999999998754
No 240
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.71 E-value=1.9e-08 Score=77.38 Aligned_cols=72 Identities=18% Similarity=0.250 Sum_probs=52.8
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhh--cccCeeec-cCCCCCcchhhHHHHhccccch
Q psy1134 48 IRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLY--YFRNLCLQ-EVPTDFDIKTLIDTVLNEINFA 122 (149)
Q Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~--~~~~~~~~-~~~~~~d~v~~~~~~l~~~~~~ 122 (149)
..++.+|||||||+|.++..+++. +.+|+++|+ +.+++.+++.- .+...+.. ..+ .||.+++. .++++.+++
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~~p-~~D~v~~~-~~lh~~~d~ 262 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGSNNLTYVGGDMFTSIP-NADAVLLK-YILHNWTDK 262 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCBTTEEEEECCTTTCCC-CCSEEEEE-SCGGGSCHH
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccCCCcEEEeccccCCCC-CccEEEee-hhhccCCHH
Confidence 346689999999999999999987 568999999 99999987631 11111111 122 48998877 888887654
No 241
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.70 E-value=2.8e-08 Score=79.12 Aligned_cols=57 Identities=16% Similarity=0.162 Sum_probs=47.5
Q ss_pred HHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc--C-CeEEEEeCChhHHhhhhhhhc
Q psy1134 37 LIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ--A-KKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 37 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~-~~v~giD~s~~~i~~a~~~~~ 93 (149)
.-...+...+.+.++.+|||+|||+|..+..+++. + .+|+|+|+|+.+++.+++++.
T Consensus 246 ~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~ 305 (450)
T 2yxl_A 246 EASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVK 305 (450)
T ss_dssp HHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHH
T ss_pred chhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHH
Confidence 33444555667778899999999999999999986 3 689999999999999988753
No 242
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.70 E-value=1.1e-08 Score=79.66 Aligned_cols=57 Identities=7% Similarity=0.047 Sum_probs=46.2
Q ss_pred CHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcc
Q psy1134 35 NPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 35 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~ 94 (149)
++.....++..+ ++++|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++..
T Consensus 197 ~~~~~~~~~~~~---~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~ 253 (382)
T 1wxx_A 197 DQRENRLYMERF---RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARL 253 (382)
T ss_dssp GGHHHHHHGGGC---CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHhc---CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHH
Confidence 333334444444 678999999999999999998878999999999999999988643
No 243
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.69 E-value=2.6e-08 Score=75.81 Aligned_cols=59 Identities=10% Similarity=-0.004 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhhc
Q psy1134 35 NPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 35 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~~ 93 (149)
+..-...+...+.+.++.+|||+|||+|..+..+++. ..+|+|+|+|+.+++.+++++.
T Consensus 103 qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~ 164 (315)
T 1ixk_A 103 QEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLS 164 (315)
T ss_dssp CCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHH
T ss_pred eCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHH
Confidence 3334444556677778999999999999999999986 3689999999999999998753
No 244
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.68 E-value=1.7e-08 Score=79.56 Aligned_cols=45 Identities=13% Similarity=0.094 Sum_probs=41.8
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcc
Q psy1134 50 PTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~ 94 (149)
++.+|||+|||+|..+..+++.+.+|+|+|+|+.+++.|++|+..
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~ 137 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPL 137 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHH
Confidence 478999999999999999999999999999999999999998753
No 245
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.68 E-value=3.5e-08 Score=69.94 Aligned_cols=36 Identities=31% Similarity=0.522 Sum_probs=33.0
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChh
Q psy1134 48 IRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPS 83 (149)
Q Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~ 83 (149)
..++.+|||+|||+|.++..+++.+.+|+|+|+++.
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~ 58 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEM 58 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHcCCcEEEEecccc
Confidence 357889999999999999999999889999999985
No 246
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.68 E-value=2.6e-08 Score=78.79 Aligned_cols=61 Identities=23% Similarity=0.182 Sum_probs=51.2
Q ss_pred ccCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC--CeEEEEeCChhHHhhhhhhhc
Q psy1134 33 LKNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA--KKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 33 ~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~i~~a~~~~~ 93 (149)
+.+......+...+.+.++.+|||+|||+|..+..+++.. .+|+|+|+|+.+++.+++++.
T Consensus 229 ~~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~ 291 (429)
T 1sqg_A 229 TVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLK 291 (429)
T ss_dssp EECCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHH
T ss_pred EeeCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHH
Confidence 3445555666677777889999999999999999999873 699999999999999988754
No 247
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.67 E-value=1.4e-08 Score=75.81 Aligned_cols=53 Identities=17% Similarity=0.127 Sum_probs=45.5
Q ss_pred HHHHHcCCCCCCeEEEEcCCcchhHHHHHhc--C-CeEEEEeCChhHHhhhhhhhc
Q psy1134 41 SIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ--A-KKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 41 ~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~-~~v~giD~s~~~i~~a~~~~~ 93 (149)
.+...+.+.++.+|||+|||+|..+..+++. + .+|+|+|+|+.+++.++++..
T Consensus 74 l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~ 129 (274)
T 3ajd_A 74 IPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNIN 129 (274)
T ss_dssp HHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHH
Confidence 3445567778899999999999999999985 4 799999999999999988754
No 248
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.66 E-value=3.2e-08 Score=77.41 Aligned_cols=60 Identities=8% Similarity=0.036 Sum_probs=51.8
Q ss_pred CHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC----------------------------------------Ce
Q psy1134 35 NPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA----------------------------------------KK 74 (149)
Q Consensus 35 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~----------------------------------------~~ 74 (149)
.+.++..++....+.++..+||++||+|.+++.++..+ .+
T Consensus 179 ~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 258 (384)
T 3ldg_A 179 KENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLD 258 (384)
T ss_dssp CHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC
T ss_pred cHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCce
Confidence 36788888888888888999999999999999887652 35
Q ss_pred EEEEeCChhHHhhhhhhhcc
Q psy1134 75 VIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 75 v~giD~s~~~i~~a~~~~~~ 94 (149)
|+|+|+|+.|++.|++|+..
T Consensus 259 v~GvDid~~al~~Ar~Na~~ 278 (384)
T 3ldg_A 259 ISGFDFDGRMVEIARKNARE 278 (384)
T ss_dssp EEEEESCHHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHH
Confidence 99999999999999998754
No 249
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.66 E-value=3.8e-08 Score=76.30 Aligned_cols=78 Identities=17% Similarity=0.236 Sum_probs=54.0
Q ss_pred HHHHcC-CCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhh--cccCeeec-cCCCCCcchhhHHHH
Q psy1134 42 IVDKGA-IRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLY--YFRNLCLQ-EVPTDFDIKTLIDTV 115 (149)
Q Consensus 42 ~~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~--~~~~~~~~-~~~~~~d~v~~~~~~ 115 (149)
++..++ ..+..+|||||||+|.++..+++. +.+++++|+ +.+++.++++- .+...+.. ..+.. |.+++. .+
T Consensus 194 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~~p~~-D~v~~~-~v 270 (368)
T 3reo_A 194 ILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAFSGVEHLGGDMFDGVPKG-DAIFIK-WI 270 (368)
T ss_dssp HHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCTTTCCCCC-SEEEEE-SC
T ss_pred HHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhcCCCEEEecCCCCCCCCC-CEEEEe-ch
Confidence 444444 556789999999999999999987 568999999 99999887642 11111111 22333 777666 77
Q ss_pred hccccch
Q psy1134 116 LNEINFA 122 (149)
Q Consensus 116 l~~~~~~ 122 (149)
+++.+++
T Consensus 271 lh~~~~~ 277 (368)
T 3reo_A 271 CHDWSDE 277 (368)
T ss_dssp GGGBCHH
T ss_pred hhcCCHH
Confidence 8777654
No 250
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.65 E-value=5.1e-08 Score=75.51 Aligned_cols=80 Identities=18% Similarity=0.240 Sum_probs=55.2
Q ss_pred HHHHHHcC-CCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhh--cccCeeec-cCCCCCcchhhHH
Q psy1134 40 QSIVDKGA-IRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLY--YFRNLCLQ-EVPTDFDIKTLID 113 (149)
Q Consensus 40 ~~~~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~--~~~~~~~~-~~~~~~d~v~~~~ 113 (149)
..++..++ ..+..+|||||||+|.++..+++. ..+++++|+ +.+++.+++.- .+...+.. ..+.. |.+++.
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~D~~~~~p~~-D~v~~~- 266 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQFPGVTHVGGDMFKEVPSG-DTILMK- 266 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCTTTCCCCC-SEEEEE-
T ss_pred HHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhcCCeEEEeCCcCCCCCCC-CEEEeh-
Confidence 34455555 566789999999999999999987 568999999 99999887641 11111111 22333 777665
Q ss_pred HHhccccch
Q psy1134 114 TVLNEINFA 122 (149)
Q Consensus 114 ~~l~~~~~~ 122 (149)
.++++.+++
T Consensus 267 ~vlh~~~d~ 275 (364)
T 3p9c_A 267 WILHDWSDQ 275 (364)
T ss_dssp SCGGGSCHH
T ss_pred HHhccCCHH
Confidence 777776653
No 251
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.63 E-value=5.8e-08 Score=81.27 Aligned_cols=60 Identities=10% Similarity=0.069 Sum_probs=47.0
Q ss_pred cCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCC-eEEEEeCChhHHhhhhhhhccc
Q psy1134 34 KNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAK-KVIACEIDPSCKSYFPSLYYFR 95 (149)
Q Consensus 34 ~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~giD~s~~~i~~a~~~~~~~ 95 (149)
.+.+..+.++.... ++++|||+|||||.+++.++..+. +|+++|+|+.+++.|++|+...
T Consensus 525 ~d~r~~r~~l~~~~--~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~n 585 (703)
T 3v97_A 525 LDHRIARRMLGQMS--KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLN 585 (703)
T ss_dssp GGGHHHHHHHHHHC--TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHhc--CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc
Confidence 34444444444433 688999999999999999998855 6999999999999999986543
No 252
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.62 E-value=4e-08 Score=72.97 Aligned_cols=52 Identities=13% Similarity=0.193 Sum_probs=42.4
Q ss_pred HHHHHHcCCCCC--CeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 40 QSIVDKGAIRPT--DTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 40 ~~~~~~l~~~~~--~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
+.+++.+...++ .+|||+|||+|..++.++..+.+|+++|.|+.+++.++++
T Consensus 76 e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~ 129 (258)
T 2oyr_A 76 EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDG 129 (258)
T ss_dssp SHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHH
T ss_pred HHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHH
Confidence 345556666666 8999999999999999999988999999999876655544
No 253
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.61 E-value=7.1e-08 Score=78.52 Aligned_cols=76 Identities=9% Similarity=0.059 Sum_probs=59.5
Q ss_pred HHhhcccccccccccccCHHHHHHHHHHcC----CCCCCeEEEEcCCcchhHHHHHhc-----CCeEEEEeCChhHHhhh
Q psy1134 18 WKICIQFNKDFGQHILKNPLIIQSIVDKGA----IRPTDTVLEIGPGTGNMTVKILEQ-----AKKVIACEIDPSCKSYF 88 (149)
Q Consensus 18 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~----~~~~~~vLDiGcG~G~~~~~l~~~-----~~~v~giD~s~~~i~~a 88 (149)
..+....++..|++| +++.+.+.|++.+. +.++.+|+|++||||.+...+++. ...++|+|+++.++..|
T Consensus 186 ~~~a~~~~k~~G~fy-TP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA 264 (542)
T 3lkd_A 186 GQFATDSGKKAGEFY-TPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLA 264 (542)
T ss_dssp HHHHCC---CCSSCC-CCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHH
T ss_pred HHHHHHhcccCCeec-ccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHH
Confidence 344445556677765 89999999999876 456789999999999999888776 46899999999999999
Q ss_pred hhhhcc
Q psy1134 89 PSLYYF 94 (149)
Q Consensus 89 ~~~~~~ 94 (149)
+.++..
T Consensus 265 ~~Nl~l 270 (542)
T 3lkd_A 265 RMNMIL 270 (542)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 987543
No 254
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.60 E-value=3.8e-08 Score=75.57 Aligned_cols=80 Identities=18% Similarity=0.233 Sum_probs=54.3
Q ss_pred HHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhh-hcc-cCeee------ccCCCCCcch
Q psy1134 40 QSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSL-YYF-RNLCL------QEVPTDFDIK 109 (149)
Q Consensus 40 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~-~~~-~~~~~------~~~~~~~d~v 109 (149)
..+++.+++.++.+|||||||+|.++..+++. +.+++++|++ .++...+.. ... .++.. ...+ .||.+
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~~~~~~~~~~~~v~~~~~d~~~~~p-~~D~v 251 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVARHRLDAPDVAGRWKVVEGDFLREVP-HADVH 251 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHTTCCCCCGGGTTSEEEEECCTTTCCC-CCSEE
T ss_pred HHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhhcccccccCCCCCeEEEecCCCCCCC-CCcEE
Confidence 34566677777889999999999999999987 4589999994 455522111 011 11211 2234 89999
Q ss_pred hhHHHHhccccch
Q psy1134 110 TLIDTVLNEINFA 122 (149)
Q Consensus 110 ~~~~~~l~~~~~~ 122 (149)
++. .++++.+++
T Consensus 252 ~~~-~vlh~~~d~ 263 (348)
T 3lst_A 252 VLK-RILHNWGDE 263 (348)
T ss_dssp EEE-SCGGGSCHH
T ss_pred EEe-hhccCCCHH
Confidence 877 888887765
No 255
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.60 E-value=6.1e-08 Score=78.90 Aligned_cols=69 Identities=16% Similarity=0.221 Sum_probs=54.5
Q ss_pred ccccccccccCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc----C----------------CeEEEEeCChhH
Q psy1134 25 NKDFGQHILKNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ----A----------------KKVIACEIDPSC 84 (149)
Q Consensus 25 ~~~~g~~~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~----~----------------~~v~giD~s~~~ 84 (149)
++..|++| ++..+...|++.+.+.++.+|+|+|||+|.++..+++. . ..++|+|+++.+
T Consensus 145 ~~~~G~fy-TP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~ 223 (541)
T 2ar0_A 145 KSGAGQYF-TPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGT 223 (541)
T ss_dssp -----CCC-CCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHH
T ss_pred cccCCeee-CCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHH
Confidence 34556655 88888899999988888889999999999999887764 1 379999999999
Q ss_pred Hhhhhhhhcc
Q psy1134 85 KSYFPSLYYF 94 (149)
Q Consensus 85 i~~a~~~~~~ 94 (149)
++.|+.++..
T Consensus 224 ~~lA~~nl~l 233 (541)
T 2ar0_A 224 RRLALMNCLL 233 (541)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 9999987543
No 256
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.56 E-value=1.6e-07 Score=72.89 Aligned_cols=66 Identities=9% Similarity=0.209 Sum_probs=48.2
Q ss_pred ccccccccCHHHHHHHHHH--cCCCCCCeEEEEcCCcchhHHHHHhcC--CeEEEEeCChhHHhhhhhhhc
Q psy1134 27 DFGQHILKNPLIIQSIVDK--GAIRPTDTVLEIGPGTGNMTVKILEQA--KKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 27 ~~g~~~~~~~~~~~~~~~~--l~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~i~~a~~~~~ 93 (149)
.+.+.+...+.....++.. ....++++|||+| |+|.++..++..+ .+|+|+|+|+.|++.|+++..
T Consensus 147 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~ 216 (373)
T 2qm3_A 147 EFDQAYVTPETTVARVILMHTRGDLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAAN 216 (373)
T ss_dssp GGTCCCBCHHHHHHHHHHHHHTTCSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHH
T ss_pred hcCCeecCHHHHHHHHHHHhhcCCCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH
Confidence 3445343434444444432 2233678999999 9999999998874 599999999999999998853
No 257
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.56 E-value=8.8e-08 Score=67.49 Aligned_cols=36 Identities=25% Similarity=0.388 Sum_probs=31.5
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhc----CCeEEEEeCChh
Q psy1134 48 IRPTDTVLEIGPGTGNMTVKILEQ----AKKVIACEIDPS 83 (149)
Q Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~----~~~v~giD~s~~ 83 (149)
..++.+|||+|||+|.++..+++. +.+|+|+|+|+.
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~ 59 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIM 59 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCcc
Confidence 356789999999999999999987 368999999994
No 258
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.56 E-value=3.7e-08 Score=74.79 Aligned_cols=43 Identities=21% Similarity=0.354 Sum_probs=34.1
Q ss_pred HHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeC----ChhHHh
Q psy1134 43 VDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEI----DPSCKS 86 (149)
Q Consensus 43 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~----s~~~i~ 86 (149)
.+.....++.+|||+|||+|.++..+++. .+|+|+|+ ++.+++
T Consensus 75 ~~~~~~~~g~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~~~~ 121 (305)
T 2p41_A 75 VERNLVTPEGKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPGHEE 121 (305)
T ss_dssp HHTTSSCCCEEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCC
T ss_pred HHcCCCCCCCEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchhHHH
Confidence 33333346789999999999999999998 78999999 665544
No 259
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.55 E-value=1.1e-07 Score=70.77 Aligned_cols=44 Identities=11% Similarity=0.137 Sum_probs=39.5
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
..+++|||||||+|.++..+++.+.+|+++|+|+.+++.|++++
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~ 114 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFF 114 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTS
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHH
Confidence 35689999999999999998877678999999999999998875
No 260
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.55 E-value=8.6e-08 Score=71.76 Aligned_cols=60 Identities=20% Similarity=0.201 Sum_probs=43.8
Q ss_pred cCHHHHHHHHHHcCCC-CCCeEEEEcCCc--chhHHHHHhc---CCeEEEEeCChhHHhhhhhhhc
Q psy1134 34 KNPLIIQSIVDKGAIR-PTDTVLEIGPGT--GNMTVKILEQ---AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 34 ~~~~~~~~~~~~l~~~-~~~~vLDiGcG~--G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~~ 93 (149)
.+..+..+....+... ...++||||||+ +..+..++++ +.+|+++|.|+.|++.|++++.
T Consensus 61 ~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~ 126 (277)
T 3giw_A 61 ANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLA 126 (277)
T ss_dssp HHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHC
T ss_pred HHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhc
Confidence 3356777777777532 346899999997 3344444443 6799999999999999988764
No 261
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.54 E-value=1.3e-07 Score=77.12 Aligned_cols=75 Identities=17% Similarity=0.075 Sum_probs=59.9
Q ss_pred HHhhcccccccccccccCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc-----------------CCeEEEEeC
Q psy1134 18 WKICIQFNKDFGQHILKNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ-----------------AKKVIACEI 80 (149)
Q Consensus 18 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-----------------~~~v~giD~ 80 (149)
..+....++..|++| +++.+.+.|++.+.+.++ +|+|++||||.+...+++. ...++|+|+
T Consensus 214 ~~~a~~~~k~~G~fy-TP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Ei 291 (544)
T 3khk_A 214 GQFALAEGKQGGQYY-TPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQES 291 (544)
T ss_dssp HHHHHTTTCCSTTTC-CCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCC
T ss_pred HHHHHhhCccCCeEe-CCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeC
Confidence 344445556777766 899999999999987655 9999999999998876542 347999999
Q ss_pred ChhHHhhhhhhhcc
Q psy1134 81 DPSCKSYFPSLYYF 94 (149)
Q Consensus 81 s~~~i~~a~~~~~~ 94 (149)
++.++..|+.++..
T Consensus 292 d~~~~~lA~~Nl~l 305 (544)
T 3khk_A 292 NPTTWKLAAMNMVI 305 (544)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 99999999988643
No 262
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.53 E-value=1.8e-07 Score=65.57 Aligned_cols=37 Identities=19% Similarity=0.307 Sum_probs=32.5
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhc-C----------CeEEEEeCChhH
Q psy1134 48 IRPTDTVLEIGPGTGNMTVKILEQ-A----------KKVIACEIDPSC 84 (149)
Q Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~-~----------~~v~giD~s~~~ 84 (149)
+.++.+|||+|||+|.++..+++. + .+|+|+|+|+.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~ 67 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF 67 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc
Confidence 356889999999999999999988 3 789999999953
No 263
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.53 E-value=2.4e-08 Score=71.27 Aligned_cols=60 Identities=12% Similarity=0.109 Sum_probs=41.2
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcccCeeecc-CCCCCcchhhHHHHhc
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYFRNLCLQE-VPTDFDIKTLIDTVLN 117 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~-~~~~~d~v~~~~~~l~ 117 (149)
.++.+|||+|||+|.++..+ +.+|+|+|+|+.- ..+...++.... ....||.|++. .+++
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l---~~~v~~~D~s~~~-----~~~~~~d~~~~~~~~~~fD~v~~~-~~l~ 126 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSI---RNPVHCFDLASLD-----PRVTVCDMAQVPLEDESVDVAVFC-LSLM 126 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHC---CSCEEEEESSCSS-----TTEEESCTTSCSCCTTCEEEEEEE-SCCC
T ss_pred CCCCeEEEECCcCCHHHHHh---hccEEEEeCCCCC-----ceEEEeccccCCCCCCCEeEEEEe-hhcc
Confidence 46789999999999999887 3799999999981 112222222222 23578999876 5554
No 264
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.51 E-value=7.8e-08 Score=76.89 Aligned_cols=55 Identities=16% Similarity=0.152 Sum_probs=46.9
Q ss_pred HHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhhc
Q psy1134 39 IQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 39 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~~ 93 (149)
...+...+...++.+|||+|||+|..+..+++. ...|+|+|+|+.+++.+++++.
T Consensus 90 s~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~ 147 (464)
T 3m6w_A 90 AQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVE 147 (464)
T ss_dssp THHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHH
T ss_pred HHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH
Confidence 344555667778999999999999999999986 3689999999999999998864
No 265
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.47 E-value=5.6e-08 Score=74.89 Aligned_cols=72 Identities=21% Similarity=0.193 Sum_probs=51.2
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhh--hcccCeeeccCCCCCcchhhHHHHhccccch
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSL--YYFRNLCLQEVPTDFDIKTLIDTVLNEINFA 122 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~--~~~~~~~~~~~~~~~d~v~~~~~~l~~~~~~ 122 (149)
.++.+|||||||+|.++..+++. ..+++++|+ +.+++.+++. ..+...+.......+|.+++. .++++.+++
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~~~~~D~v~~~-~vlh~~~d~ 267 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTGNENLNFVGGDMFKSIPSADAVLLK-WVLHDWNDE 267 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCCCSSEEEEECCTTTCCCCCSEEEEE-SCGGGSCHH
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcccCCCcEEEeCccCCCCCCceEEEEc-ccccCCCHH
Confidence 45679999999999999999988 458999999 7999988752 111111111111258988877 788877654
No 266
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.46 E-value=2.2e-07 Score=74.61 Aligned_cols=55 Identities=15% Similarity=0.120 Sum_probs=45.9
Q ss_pred HHHHHHHcCCC--CCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhhc
Q psy1134 39 IQSIVDKGAIR--PTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 39 ~~~~~~~l~~~--~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~~ 93 (149)
...+...+.+. ++.+|||+|||+|..+..+++. ...|+++|+|+.+++.+++++.
T Consensus 104 s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~ 163 (479)
T 2frx_A 104 SMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANIS 163 (479)
T ss_dssp HHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH
Confidence 33444556666 8899999999999999999986 3689999999999999998864
No 267
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=98.45 E-value=4.9e-07 Score=66.92 Aligned_cols=59 Identities=17% Similarity=0.305 Sum_probs=51.6
Q ss_pred CHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcc
Q psy1134 35 NPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 35 ~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~ 94 (149)
+..+.+++++... .+++.|||+.||+|..+....+.+.+++|+|+++.+++.+++++..
T Consensus 198 p~~l~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 198 PRDLIERIIRASS-NPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp CHHHHHHHHHHHC-CTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHh
Confidence 3667777777765 5788999999999999999998899999999999999999988654
No 268
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.43 E-value=1.6e-07 Score=74.98 Aligned_cols=55 Identities=16% Similarity=0.235 Sum_probs=46.8
Q ss_pred HHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhhc
Q psy1134 39 IQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 39 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~~ 93 (149)
...+...+.+.++.+|||+|||+|..+..+++. ...|+++|+|+.+++.+++++.
T Consensus 94 s~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~ 151 (456)
T 3m4x_A 94 AMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIE 151 (456)
T ss_dssp THHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHH
Confidence 344555667778999999999999999999986 3689999999999999998864
No 269
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.40 E-value=5.1e-07 Score=61.34 Aligned_cols=49 Identities=20% Similarity=0.283 Sum_probs=39.0
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcc-hhHHHHHh-cCCeEEEEeCChhHHh
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTG-NMTVKILE-QAKKVIACEIDPSCKS 86 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G-~~~~~l~~-~~~~v~giD~s~~~i~ 86 (149)
..+.+.+.+... .+.+|||||||.| ..+..|++ .+..|+++|+|+..++
T Consensus 23 e~LaeYI~~~~~--~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~ 73 (153)
T 2k4m_A 23 NDLAVYIIRCSG--PGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG 73 (153)
T ss_dssp HHHHHHHHHHSC--SSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT
T ss_pred HHHHHHHHhcCC--CCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc
Confidence 344444444443 4679999999999 59999998 6889999999999888
No 270
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.40 E-value=4.5e-07 Score=68.96 Aligned_cols=54 Identities=17% Similarity=0.143 Sum_probs=46.1
Q ss_pred HHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhhhhhc
Q psy1134 40 QSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 40 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~~ 93 (149)
..+...+.+.++++|||+|||+|..+..+++. ..+|+++|+++.+++.+++++.
T Consensus 92 ~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~ 148 (309)
T 2b9e_A 92 CLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLA 148 (309)
T ss_dssp GHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHH
Confidence 34445567778999999999999999999985 3699999999999999998864
No 271
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.35 E-value=7.5e-07 Score=66.72 Aligned_cols=55 Identities=25% Similarity=0.381 Sum_probs=50.2
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhh
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~ 90 (149)
+-+.+.+++.+.+.+++.+||.+||.|..+..+++++.+|+|+|.++.+++.|++
T Consensus 8 pVLl~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~ 62 (285)
T 1wg8_A 8 PVLYQEALDLLAVRPGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKG 62 (285)
T ss_dssp CTTHHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred hHHHHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 4567788888888889999999999999999999988899999999999999987
No 272
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.34 E-value=1.7e-06 Score=73.12 Aligned_cols=72 Identities=10% Similarity=0.109 Sum_probs=57.2
Q ss_pred HHHHhhcccccccccccccCHHHHHHHHHH----cC--CCCCCeEEEEcCCcchhHHHHHhcC-----CeEEEEeCChhH
Q psy1134 16 TVWKICIQFNKDFGQHILKNPLIIQSIVDK----GA--IRPTDTVLEIGPGTGNMTVKILEQA-----KKVIACEIDPSC 84 (149)
Q Consensus 16 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----l~--~~~~~~vLDiGcG~G~~~~~l~~~~-----~~v~giD~s~~~ 84 (149)
.+.+|....++..|+.+ .++.+...|+.. ++ ..++.+|||+|||+|.+...+++.. .+++|+|+++.+
T Consensus 282 ll~eya~k~Rkk~GqFY-TP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~A 360 (878)
T 3s1s_A 282 LIHDIATRGRGHEGVVP-TDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLF 360 (878)
T ss_dssp HHHHHHTTSCCCCBSSS-CCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGG
T ss_pred HHHHHHHHhCCcCceEc-CCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHH
Confidence 34456666667777765 888888888877 33 2357799999999999999988763 379999999999
Q ss_pred Hhhh
Q psy1134 85 KSYF 88 (149)
Q Consensus 85 i~~a 88 (149)
++.|
T Consensus 361 l~LA 364 (878)
T 3s1s_A 361 LELL 364 (878)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9999
No 273
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.33 E-value=5.5e-07 Score=70.76 Aligned_cols=49 Identities=16% Similarity=0.184 Sum_probs=37.4
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCC------cchhHHHHHhc---CCeEEEEeCChhHH
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPG------TGNMTVKILEQ---AKKVIACEIDPSCK 85 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG------~G~~~~~l~~~---~~~v~giD~s~~~i 85 (149)
..+.+++++.+. .++.+||||||| +|..+..+++. +.+|+|+|+|+.|.
T Consensus 203 ~~~Ye~lL~~l~-~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~ 260 (419)
T 3sso_A 203 TPHYDRHFRDYR-NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH 260 (419)
T ss_dssp HHHHHHHHGGGT-TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG
T ss_pred HHHHHHHHHhhc-CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh
Confidence 445556666554 357899999999 77777777654 67999999999985
No 274
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.32 E-value=7.9e-07 Score=69.37 Aligned_cols=46 Identities=15% Similarity=0.153 Sum_probs=41.2
Q ss_pred CCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhccc
Q psy1134 50 PTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYYFR 95 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~~~ 95 (149)
++.+|||+|||+|..++.++.+ +.+|+++|+|+.+++.+++|+...
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n 94 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLN 94 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHh
Confidence 6789999999999999999987 468999999999999999987543
No 275
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.27 E-value=1.4e-06 Score=73.03 Aligned_cols=63 Identities=13% Similarity=0.145 Sum_probs=53.1
Q ss_pred cCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC-----------------------------------------
Q psy1134 34 KNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA----------------------------------------- 72 (149)
Q Consensus 34 ~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~----------------------------------------- 72 (149)
..+.++..++....+.++..|||++||+|.+++.++..+
T Consensus 174 l~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~ 253 (703)
T 3v97_A 174 IKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLA 253 (703)
T ss_dssp SCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccc
Confidence 346788889999888888899999999999999877541
Q ss_pred ---CeEEEEeCChhHHhhhhhhhcccC
Q psy1134 73 ---KKVIACEIDPSCKSYFPSLYYFRN 96 (149)
Q Consensus 73 ---~~v~giD~s~~~i~~a~~~~~~~~ 96 (149)
.+|+|+|+++.+++.|++|+...+
T Consensus 254 ~~~~~i~G~Did~~av~~A~~N~~~ag 280 (703)
T 3v97_A 254 EYSSHFYGSDSDARVIQRARTNARLAG 280 (703)
T ss_dssp HCCCCEEEEESCHHHHHHHHHHHHHTT
T ss_pred cCCccEEEEECCHHHHHHHHHHHHHcC
Confidence 479999999999999999875433
No 276
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.27 E-value=1.5e-06 Score=66.97 Aligned_cols=81 Identities=17% Similarity=0.252 Sum_probs=57.5
Q ss_pred HHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhcc---cCeeecc------CCCCCcc
Q psy1134 40 QSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYYF---RNLCLQE------VPTDFDI 108 (149)
Q Consensus 40 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~~---~~~~~~~------~~~~~d~ 108 (149)
..++...++....+|||||||+|.++..++++ ..+++..|+ |.+++.++++... .++.... .....|.
T Consensus 169 ~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~~~D~ 247 (353)
T 4a6d_A 169 RSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADL 247 (353)
T ss_dssp HHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCCCCSE
T ss_pred HHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCCCceE
Confidence 34445556667789999999999999999998 567888896 8899999876532 1222221 2245677
Q ss_pred hhhHHHHhccccch
Q psy1134 109 KTLIDTVLNEINFA 122 (149)
Q Consensus 109 v~~~~~~l~~~~~~ 122 (149)
+++. .+|++.+++
T Consensus 248 ~~~~-~vlh~~~d~ 260 (353)
T 4a6d_A 248 YILA-RVLHDWADG 260 (353)
T ss_dssp EEEE-SSGGGSCHH
T ss_pred EEee-eecccCCHH
Confidence 7766 788877664
No 277
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.19 E-value=1.8e-06 Score=66.87 Aligned_cols=44 Identities=25% Similarity=0.300 Sum_probs=40.0
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-CCeEEEEeCChhHHhhhhhhhc
Q psy1134 50 PTDTVLEIGPGTGNMTVKILEQ-AKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~~~~ 93 (149)
++++||+||||+|.++..+++. ..+|++||+|+.+++.|++++.
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~ 232 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMR 232 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH
Confidence 5789999999999999999887 5689999999999999998864
No 278
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.17 E-value=1.4e-06 Score=68.28 Aligned_cols=49 Identities=14% Similarity=0.197 Sum_probs=42.5
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc--C-CeEEEEeCChhHHhhhhhhhcccCe
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQ--A-KKVIACEIDPSCKSYFPSLYYFRNL 97 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~--~-~~v~giD~s~~~i~~a~~~~~~~~~ 97 (149)
.++.+|||++||+|.+++.++.+ + .+|+++|+|+.+++.+++|++..++
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl 102 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNI 102 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCC
Confidence 35789999999999999999885 4 6899999999999999999765443
No 279
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.13 E-value=6.5e-06 Score=66.85 Aligned_cols=65 Identities=17% Similarity=0.195 Sum_probs=55.7
Q ss_pred ccccccccCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc---------------CCeEEEEeCChhHHhhhhhh
Q psy1134 27 DFGQHILKNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ---------------AKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 27 ~~g~~~~~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---------------~~~v~giD~s~~~i~~a~~~ 91 (149)
..|++| +++.+.+.|++.+.+.++.+|+|.+||||.+.....+. ...++|+|+++.+...|+.+
T Consensus 195 ~~Gqfy-TP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mN 273 (530)
T 3ufb_A 195 DSGEFY-TPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMN 273 (530)
T ss_dssp SCCCCC-CCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHH
T ss_pred cCceEC-CcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHH
Confidence 457655 99999999999999888999999999999998876543 24699999999999999877
Q ss_pred h
Q psy1134 92 Y 92 (149)
Q Consensus 92 ~ 92 (149)
+
T Consensus 274 l 274 (530)
T 3ufb_A 274 L 274 (530)
T ss_dssp H
T ss_pred H
Confidence 5
No 280
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.95 E-value=5.6e-06 Score=62.38 Aligned_cols=61 Identities=11% Similarity=0.171 Sum_probs=37.8
Q ss_pred cCCCCCCeEEEEcCCc------chhHHHHHhc---CCeEEEEeCChhHHhhhhhhh-cccCeeeccCCCCCcchhh
Q psy1134 46 GAIRPTDTVLEIGPGT------GNMTVKILEQ---AKKVIACEIDPSCKSYFPSLY-YFRNLCLQEVPTDFDIKTL 111 (149)
Q Consensus 46 l~~~~~~~vLDiGcG~------G~~~~~l~~~---~~~v~giD~s~~~i~~a~~~~-~~~~~~~~~~~~~~d~v~~ 111 (149)
+...++.+|||+|||+ |. ..+++. +.+|+|+|+|+. +. +-.+ ...++........||.|++
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v~--~v~~~i~gD~~~~~~~~~fD~Vvs 129 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-VS--DADSTLIGDCATVHTANKWDLIIS 129 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-BC--SSSEEEESCGGGCCCSSCEEEEEE
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-CC--CCEEEEECccccCCccCcccEEEE
Confidence 3556788999999954 66 344444 479999999998 21 1112 2222222223467898876
No 281
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.83 E-value=1.9e-06 Score=59.50 Aligned_cols=59 Identities=14% Similarity=-0.052 Sum_probs=42.4
Q ss_pred cCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhc----ccCeeec--cC----CCCCcchhhHHHH
Q psy1134 46 GAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYY----FRNLCLQ--EV----PTDFDIKTLIDTV 115 (149)
Q Consensus 46 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~----~~~~~~~--~~----~~~~d~v~~~~~~ 115 (149)
+...++.+|||+|||+ | ++|+|+.|++.|+++.. +...+.. .. ...||.|++. .+
T Consensus 8 ~g~~~g~~vL~~~~g~-------------v-~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~-~~ 72 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS-------------S-PVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSG-LV 72 (176)
T ss_dssp TTCCTTSEEEEEECTT-------------S-CHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEEC-CS
T ss_pred cCCCCCCEEEEecCCc-------------e-eeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEEC-Ch
Confidence 4556889999999996 2 39999999999988752 1111211 12 4679999887 67
Q ss_pred hccc
Q psy1134 116 LNEI 119 (149)
Q Consensus 116 l~~~ 119 (149)
++++
T Consensus 73 l~~~ 76 (176)
T 2ld4_A 73 PGST 76 (176)
T ss_dssp TTCC
T ss_pred hhhc
Confidence 8877
No 282
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=97.77 E-value=6.4e-05 Score=57.24 Aligned_cols=62 Identities=16% Similarity=0.169 Sum_probs=52.2
Q ss_pred cCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcccC
Q psy1134 34 KNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYFRN 96 (149)
Q Consensus 34 ~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~~~ 96 (149)
.+..+.+++++... .+++.|||.-||+|..+....+.+.+.+|+|+++.+++.+++++....
T Consensus 237 kp~~l~~~~i~~~~-~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 237 FPAKLPEFFIRMLT-EPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp CCTHHHHHHHHHHC-CTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGGGSCSC
T ss_pred CCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHHHHHhcc
Confidence 33677777777654 578899999999999999988889999999999999999998875433
No 283
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.73 E-value=5.7e-05 Score=53.99 Aligned_cols=55 Identities=22% Similarity=0.239 Sum_probs=42.5
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc-CCeEEEEeCChhHHhhhhhhhcc
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ-AKKVIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~~~~~ 94 (149)
+.-.+.+...+ .+.++|||+|| |+.|+.+++. +.+|+++|.++++.+.+++++..
T Consensus 18 ~~~~~~L~~~l--~~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~ 73 (202)
T 3cvo_A 18 PAEAEALRMAY--EEAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAA 73 (202)
T ss_dssp HHHHHHHHHHH--HHCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh--hCCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 44444443433 36789999998 5788888887 78999999999999999987653
No 284
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.67 E-value=3.1e-05 Score=64.07 Aligned_cols=60 Identities=18% Similarity=0.234 Sum_probs=38.4
Q ss_pred CCeEEEEcCCcchhHHHHHhc----CC--eEEEEeCChhHHhhhhhhhc-----------ccCeeeccCCCCCcchhh
Q psy1134 51 TDTVLEIGPGTGNMTVKILEQ----AK--KVIACEIDPSCKSYFPSLYY-----------FRNLCLQEVPTDFDIKTL 111 (149)
Q Consensus 51 ~~~vLDiGcG~G~~~~~l~~~----~~--~v~giD~s~~~i~~a~~~~~-----------~~~~~~~~~~~~~d~v~~ 111 (149)
+..|+|+|||+|.+....++. +. +|++||-|+ ++..+++... .++++....+++.|++++
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVS 434 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVS 434 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEEC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEE
Confidence 457999999999995554443 23 689999998 5555655432 122222235677777764
No 285
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.66 E-value=4.4e-05 Score=57.57 Aligned_cols=90 Identities=17% Similarity=0.128 Sum_probs=60.7
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhhhc--------ccCeeecc---------CCCCCcch
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSLYY--------FRNLCLQE---------VPTDFDIK 109 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~~~--------~~~~~~~~---------~~~~~d~v 109 (149)
.++++||-||.|.|..+..+++. ..+|+.||+++.+++.+++.+. -....+.. ....||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 36789999999999999999987 5799999999999999987642 11222211 23577877
Q ss_pred hhHHHHhccccchhHhhccCChhhHHHHHHhhhcc
Q psy1134 110 TLIDTVLNEINFADKRARTMDLDDFVLLLATFNKH 144 (149)
Q Consensus 110 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (149)
++ + .+++......+...+|...+...-+.
T Consensus 162 i~--D----~~dp~~~~~~L~t~eFy~~~~~~L~p 190 (294)
T 3o4f_A 162 IS--D----CTDPIGPGESLFTSAFYEGCKRCLNP 190 (294)
T ss_dssp EE--S----CCCCCCTTCCSSCCHHHHHHHHTEEE
T ss_pred EE--e----CCCcCCCchhhcCHHHHHHHHHHhCC
Confidence 53 2 23333344556667766665544333
No 286
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=97.64 E-value=0.00012 Score=55.81 Aligned_cols=60 Identities=18% Similarity=0.263 Sum_probs=51.5
Q ss_pred cCHHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCCh---hHHhhhhhhhcc
Q psy1134 34 KNPLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDP---SCKSYFPSLYYF 94 (149)
Q Consensus 34 ~~~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~---~~i~~a~~~~~~ 94 (149)
.+..+.+++++... .+++.|||.-||+|..+....+.+.+.+|+|+++ .+++.+++++..
T Consensus 227 kp~~l~~~~i~~~~-~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~Rl~~ 289 (319)
T 1eg2_A 227 KPAAVIERLVRALS-HPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLQD 289 (319)
T ss_dssp CCHHHHHHHHHHHS-CTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHHC--
T ss_pred CCHHHHHHHHHHhC-CCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHHHHH
Confidence 45778888887765 5788999999999999999888899999999999 999999888753
No 287
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.58 E-value=0.00012 Score=56.06 Aligned_cols=54 Identities=22% Similarity=0.338 Sum_probs=48.4
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc---CCeEEEEeCChhHHhhhh
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ---AKKVIACEIDPSCKSYFP 89 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~giD~s~~~i~~a~ 89 (149)
+-+.+.+++.+.+.++..++|..||.|..+..+++. ..+|+|+|.++.+++.++
T Consensus 43 pVLl~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~ 99 (347)
T 3tka_A 43 TVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK 99 (347)
T ss_dssp CTTTHHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT
T ss_pred cccHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 556788888999889999999999999999999987 468999999999999985
No 288
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.56 E-value=7.8e-05 Score=57.89 Aligned_cols=34 Identities=15% Similarity=0.254 Sum_probs=31.6
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCCh
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDP 82 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~ 82 (149)
.+|.++||+||+.|.+|..+++++.+|+|||+.+
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~ 243 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGP 243 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhh
Confidence 4789999999999999999999999999999875
No 289
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.55 E-value=2.8e-05 Score=64.80 Aligned_cols=41 Identities=22% Similarity=0.320 Sum_probs=30.3
Q ss_pred CCeEEEEcCCcchhHHHH---Hhc-C-----------CeEEEEeCChhHHhhhhhh
Q psy1134 51 TDTVLEIGPGTGNMTVKI---LEQ-A-----------KKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 51 ~~~vLDiGcG~G~~~~~l---~~~-~-----------~~v~giD~s~~~i~~a~~~ 91 (149)
++.|||+|||+|.++... ++. + .+|++||.|+.++..++.+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~ 465 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYM 465 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHH
Confidence 457999999999997543 221 2 3999999999877665543
No 290
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.36 E-value=0.00023 Score=53.09 Aligned_cols=48 Identities=23% Similarity=0.400 Sum_probs=36.2
Q ss_pred HHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhh
Q psy1134 40 QSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSY 87 (149)
Q Consensus 40 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~ 87 (149)
.++.+...+.++.+|||+|||.|.++..+++. ..+|+|+|++..+...
T Consensus 80 ~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~ 129 (282)
T 3gcz_A 80 RWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEK 129 (282)
T ss_dssp HHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCC
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccc
Confidence 33444445567789999999999999988865 3579999998775433
No 291
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.33 E-value=0.00029 Score=52.51 Aligned_cols=45 Identities=16% Similarity=0.264 Sum_probs=33.8
Q ss_pred HHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhH
Q psy1134 40 QSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSC 84 (149)
Q Consensus 40 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~ 84 (149)
.++.+.....++.+|||+|||+|.++..++++ ...|+|+|++-++
T Consensus 64 ~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl 110 (277)
T 3evf_A 64 RWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDG 110 (277)
T ss_dssp HHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTT
T ss_pred HHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccC
Confidence 33444444456779999999999999988876 3578889988554
No 292
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.32 E-value=0.00028 Score=53.11 Aligned_cols=47 Identities=17% Similarity=0.318 Sum_probs=37.3
Q ss_pred HHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc-C-CeEEEEeCChh
Q psy1134 37 LIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ-A-KKVIACEIDPS 83 (149)
Q Consensus 37 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~-~~v~giD~s~~ 83 (149)
--..++.+...+.++..|||+||++|.++...+.. + .+|+|+|+...
T Consensus 81 ~KL~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~ 129 (321)
T 3lkz_A 81 AKLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGP 129 (321)
T ss_dssp HHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCST
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCC
Confidence 34455556656667889999999999999987776 4 57999999887
No 293
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.23 E-value=0.00048 Score=50.38 Aligned_cols=48 Identities=17% Similarity=0.256 Sum_probs=37.1
Q ss_pred HHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHH
Q psy1134 38 IIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCK 85 (149)
Q Consensus 38 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i 85 (149)
-..++.+...+.++..|||+||++|.++...+.. ..+|+|+|+.+.=-
T Consensus 66 KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~gh 115 (267)
T 3p8z_A 66 KLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGH 115 (267)
T ss_dssp HHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTS
T ss_pred HHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCc
Confidence 3445555556667889999999999999987776 35799999987533
No 294
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.18 E-value=0.00062 Score=53.45 Aligned_cols=47 Identities=11% Similarity=0.177 Sum_probs=40.2
Q ss_pred CCCCCeEEEEcCCcchhHHHHH-hc-C--CeEEEEeCChhHHhhhhhhhcc
Q psy1134 48 IRPTDTVLEIGPGTGNMTVKIL-EQ-A--KKVIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~-~~-~--~~v~giD~s~~~i~~a~~~~~~ 94 (149)
..++..++|+||+.|..+..++ +. + .+|+++|++|...+.++++...
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 3578899999999999999988 44 2 6899999999999999888653
No 295
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.86 E-value=0.0006 Score=52.74 Aligned_cols=53 Identities=21% Similarity=0.345 Sum_probs=44.8
Q ss_pred HHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcC--CeEEEEeCChhHHhhhhhhh
Q psy1134 40 QSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQA--KKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 40 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~giD~s~~~i~~a~~~~ 92 (149)
......+.+.+|++|||+++|.|.=|.++++.+ ..|+++|+|+.-++.+++++
T Consensus 138 ~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l 192 (359)
T 4fzv_A 138 LLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKIL 192 (359)
T ss_dssp HHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHH
Confidence 344456778899999999999999999999883 47999999999999888765
No 296
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=96.77 E-value=0.0027 Score=47.72 Aligned_cols=36 Identities=25% Similarity=0.287 Sum_probs=30.8
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhH
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSC 84 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~ 84 (149)
.++++|||+||+.|.++..++++ ...|+|+|++..+
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~ 117 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEG 117 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTT
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccc
Confidence 46789999999999999999986 3579999998654
No 297
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=96.57 E-value=0.0011 Score=48.96 Aligned_cols=33 Identities=30% Similarity=0.295 Sum_probs=26.5
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-------C-------CeEEEEeCCh
Q psy1134 50 PTDTVLEIGPGTGNMTVKILEQ-------A-------KKVIACEIDP 82 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~-------~-------~~v~giD~s~ 82 (149)
++.+|||||||+|..+..+++. . .+|+++|..|
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p 106 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFP 106 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSC
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCc
Confidence 4568999999999999886542 1 3799999887
No 298
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.47 E-value=0.0053 Score=47.78 Aligned_cols=43 Identities=26% Similarity=0.321 Sum_probs=39.0
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-CCeEEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGPGTGNMTVKILEQ-AKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~~~ 92 (149)
++++||-||.|.|..+..+.+. ..+|+.||+++.+++.|++.+
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yf 248 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYM 248 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhc
Confidence 5689999999999999999887 678999999999999998764
No 299
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.25 E-value=0.0045 Score=47.39 Aligned_cols=42 Identities=21% Similarity=0.310 Sum_probs=37.3
Q ss_pred CeEEEEcCCcchhHHHHHhcC---CeEEEEeCChhHHhhhhhhhc
Q psy1134 52 DTVLEIGPGTGNMTVKILEQA---KKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 52 ~~vLDiGcG~G~~~~~l~~~~---~~v~giD~s~~~i~~a~~~~~ 93 (149)
.+++|+.||+|.+++.+.+.| ..|.++|+++.+++..+.|+.
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~ 47 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP 47 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc
Confidence 479999999999999998887 258999999999999988864
No 300
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.94 E-value=0.019 Score=44.42 Aligned_cols=47 Identities=17% Similarity=0.256 Sum_probs=39.8
Q ss_pred HHcCCCCCCeEEEEcCCc-chhHHHHHhc-CC-eEEEEeCChhHHhhhhh
Q psy1134 44 DKGAIRPTDTVLEIGPGT-GNMTVKILEQ-AK-KVIACEIDPSCKSYFPS 90 (149)
Q Consensus 44 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~giD~s~~~i~~a~~ 90 (149)
......++++||-+|||. |.++..+++. +. +|+++|.|++.++.+++
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD 228 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 456677899999999986 8888888876 77 89999999999888865
No 301
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=95.85 E-value=0.011 Score=45.80 Aligned_cols=41 Identities=17% Similarity=0.253 Sum_probs=36.4
Q ss_pred CeEEEEcCCcchhHHHHHhcCCe-EEEEeCChhHHhhhhhhh
Q psy1134 52 DTVLEIGPGTGNMTVKILEQAKK-VIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 52 ~~vLDiGcG~G~~~~~l~~~~~~-v~giD~s~~~i~~a~~~~ 92 (149)
.+++|+.||.|.+++-+.+.|.+ |.++|+++.+++..+.|+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~ 44 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINF 44 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhC
Confidence 47999999999999999988775 569999999999988775
No 302
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=95.77 E-value=0.011 Score=43.71 Aligned_cols=43 Identities=16% Similarity=0.347 Sum_probs=29.7
Q ss_pred HHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCC
Q psy1134 39 IQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACEID 81 (149)
Q Consensus 39 ~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s 81 (149)
..++-+.--+.++.+|||+||+.|.+++..++. ...|.|..+.
T Consensus 62 L~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig 106 (269)
T 2px2_A 62 LRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKG 106 (269)
T ss_dssp HHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCC
T ss_pred HHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEc
Confidence 334444444457889999999999999999887 3343444443
No 303
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=95.77 E-value=0.014 Score=44.40 Aligned_cols=43 Identities=12% Similarity=0.163 Sum_probs=37.7
Q ss_pred CCeEEEEcCCcchhHHHHHhcCCe-EEEEeCChhHHhhhhhhhc
Q psy1134 51 TDTVLEIGPGTGNMTVKILEQAKK-VIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 51 ~~~vLDiGcG~G~~~~~l~~~~~~-v~giD~s~~~i~~a~~~~~ 93 (149)
+.+++|+.||+|.+++-+.+.|.+ |.++|+++.+++..+.|+.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~ 54 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFG 54 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHS
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcC
Confidence 468999999999999999988764 7789999999999888753
No 304
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.46 E-value=0.042 Score=41.49 Aligned_cols=50 Identities=24% Similarity=0.272 Sum_probs=41.0
Q ss_pred HHHHcCCCCCCeEEEEcCCc-chhHHHHHhc-CCeEEEEeCChhHHhhhhhh
Q psy1134 42 IVDKGAIRPTDTVLEIGPGT-GNMTVKILEQ-AKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 42 ~~~~l~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~v~giD~s~~~i~~a~~~ 91 (149)
.+......++++||-+|+|. |..+..+++. |.+|+++|.+++-.+.+++.
T Consensus 158 ~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l 209 (340)
T 3s2e_A 158 GLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRL 209 (340)
T ss_dssp HHHTTTCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc
Confidence 34555677899999999975 8888888876 88999999999999988653
No 305
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.37 E-value=0.033 Score=42.61 Aligned_cols=48 Identities=19% Similarity=0.242 Sum_probs=39.5
Q ss_pred HHcCCCCCCeEEEEcCCc-chhHHHHHhc-CC-eEEEEeCChhHHhhhhhh
Q psy1134 44 DKGAIRPTDTVLEIGPGT-GNMTVKILEQ-AK-KVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 44 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~giD~s~~~i~~a~~~ 91 (149)
+.....++++||-+|||. |..+..+++. +. +|+++|.+++..+.+++.
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l 234 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL 234 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc
Confidence 455677899999999986 8888888876 76 799999999998888653
No 306
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.03 E-value=0.056 Score=41.09 Aligned_cols=47 Identities=19% Similarity=0.336 Sum_probs=38.6
Q ss_pred HHcCCCCCCeEEEEcCCc-chhHHHHHhc-CC-eEEEEeCChhHHhhhhh
Q psy1134 44 DKGAIRPTDTVLEIGPGT-GNMTVKILEQ-AK-KVIACEIDPSCKSYFPS 90 (149)
Q Consensus 44 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~giD~s~~~i~~a~~ 90 (149)
......++++||-+|+|. |.++..+++. +. +|+++|.+++-.+.+++
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 214 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE 214 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 455677899999999985 7788888776 76 89999999998888764
No 307
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.88 E-value=0.072 Score=41.10 Aligned_cols=47 Identities=19% Similarity=0.258 Sum_probs=38.5
Q ss_pred HHcCCCCCCeEEEEcCCc-chhHHHHHhc-CC-eEEEEeCChhHHhhhhh
Q psy1134 44 DKGAIRPTDTVLEIGPGT-GNMTVKILEQ-AK-KVIACEIDPSCKSYFPS 90 (149)
Q Consensus 44 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~giD~s~~~i~~a~~ 90 (149)
......++++||-+|||. |.++..+++. |. .|+++|.+++-++.+++
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 179 VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH
Confidence 345667899999999876 8888888876 66 79999999999888865
No 308
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.88 E-value=0.069 Score=40.94 Aligned_cols=48 Identities=19% Similarity=0.261 Sum_probs=38.6
Q ss_pred HHHcCCCCCCeEEEEcCCc-chhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 43 VDKGAIRPTDTVLEIGPGT-GNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 43 ~~~l~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
+......++++||-+|+|. |.++..+++. |.+|++++.+++-.+.+++
T Consensus 187 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 187 LRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA 236 (369)
T ss_dssp HHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 3445677899999999984 7777777776 8899999999988888764
No 309
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.86 E-value=0.055 Score=40.99 Aligned_cols=50 Identities=20% Similarity=0.114 Sum_probs=40.3
Q ss_pred HHHHcCCCCCCeEEEEcCCc-chhHHHHHhc-CCeEEEEeCChhHHhhhhhh
Q psy1134 42 IVDKGAIRPTDTVLEIGPGT-GNMTVKILEQ-AKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 42 ~~~~l~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~v~giD~s~~~i~~a~~~ 91 (149)
.+......++++||-+|+|. |..+..+++. +.+|++++.+++-.+.+++.
T Consensus 168 ~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l 219 (348)
T 3two_A 168 PLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSM 219 (348)
T ss_dssp HHHHTTCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHT
T ss_pred HHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhc
Confidence 44555777899999999875 7777777776 88999999999988888653
No 310
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=94.81 E-value=0.045 Score=41.66 Aligned_cols=43 Identities=14% Similarity=0.260 Sum_probs=36.8
Q ss_pred CCeEEEEcCCcchhHHHHHhcC---CeE-EEEeCChhHHhhhhhhhc
Q psy1134 51 TDTVLEIGPGTGNMTVKILEQA---KKV-IACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 51 ~~~vLDiGcG~G~~~~~l~~~~---~~v-~giD~s~~~i~~a~~~~~ 93 (149)
.-+++|+.||.|.++.-+.+.| ..| .++|+++.+++..+.|+.
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~ 56 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFK 56 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCC
Confidence 3479999999999999998886 346 699999999999888763
No 311
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=94.80 E-value=0.034 Score=43.17 Aligned_cols=47 Identities=13% Similarity=0.275 Sum_probs=31.3
Q ss_pred HHHHHHHHcCCCC-----CCeEEEEcCCcchhHHHHHhc-----------------CCeEEEEeCChhH
Q psy1134 38 IIQSIVDKGAIRP-----TDTVLEIGPGTGNMTVKILEQ-----------------AKKVIACEIDPSC 84 (149)
Q Consensus 38 ~~~~~~~~l~~~~-----~~~vLDiGcG~G~~~~~l~~~-----------------~~~v~giD~s~~~ 84 (149)
+.+..+..+.... +.+|+|+|||+|..|..+... ..+|+..|+-.+.
T Consensus 35 ~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~ND 103 (374)
T 3b5i_A 35 LLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSND 103 (374)
T ss_dssp HHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSC
T ss_pred HHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccc
Confidence 4444445454432 468999999999999987221 2368888877665
No 312
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=94.61 E-value=0.032 Score=44.08 Aligned_cols=42 Identities=19% Similarity=0.346 Sum_probs=33.0
Q ss_pred CCeEEEEcCCcchhHHHHHhc-------CCeEEEEeCChhHHhhhhhhh
Q psy1134 51 TDTVLEIGPGTGNMTVKILEQ-------AKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 51 ~~~vLDiGcG~G~~~~~l~~~-------~~~v~giD~s~~~i~~a~~~~ 92 (149)
.-+|+|+|+|+|.++.-+.+. ..+++.||+|+.+.+.=++++
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L 186 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETL 186 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHH
Confidence 468999999999998887653 237999999998877655443
No 313
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.47 E-value=0.092 Score=39.80 Aligned_cols=50 Identities=24% Similarity=0.269 Sum_probs=40.3
Q ss_pred HHHHcCCCCCCeEEEEcCCc-chhHHHHHhc-CC-eEEEEeCChhHHhhhhhh
Q psy1134 42 IVDKGAIRPTDTVLEIGPGT-GNMTVKILEQ-AK-KVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 42 ~~~~l~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~giD~s~~~i~~a~~~ 91 (149)
.++.....++++||-+|+|. |.++..+++. +. +|+++|.+++-.+.+++.
T Consensus 158 al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l 210 (352)
T 3fpc_A 158 GAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY 210 (352)
T ss_dssp HHHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh
Confidence 34667778899999999876 7778888777 66 899999999988887653
No 314
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=94.40 E-value=0.12 Score=40.36 Aligned_cols=42 Identities=33% Similarity=0.504 Sum_probs=32.1
Q ss_pred CCeEEEEcCCcchhHHHHHhc---------CCeEEEEeCChhHHhhhhhhh
Q psy1134 51 TDTVLEIGPGTGNMTVKILEQ---------AKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 51 ~~~vLDiGcG~G~~~~~l~~~---------~~~v~giD~s~~~i~~a~~~~ 92 (149)
+-.|+|+|+|.|.++..+.+. ..+++.||+|+.+.+.=++++
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L 131 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLL 131 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHS
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHh
Confidence 347999999999998877542 237999999998887544433
No 315
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.30 E-value=0.11 Score=39.39 Aligned_cols=47 Identities=21% Similarity=0.277 Sum_probs=38.0
Q ss_pred HHcCCCCCCeEEEEcCCc-chhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 44 DKGAIRPTDTVLEIGPGT-GNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 44 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
......++++||-+|+|. |..+..+++. +.+|+++|.+++-.+.+++
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 210 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN 210 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH
Confidence 455677899999999875 7777777765 7889999999998888764
No 316
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=94.27 E-value=0.068 Score=39.87 Aligned_cols=34 Identities=12% Similarity=0.112 Sum_probs=27.9
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc-------CCeEEEEeCCh
Q psy1134 49 RPTDTVLEIGPGTGNMTVKILEQ-------AKKVIACEIDP 82 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~-------~~~v~giD~s~ 82 (149)
..++.|||+|+..|..++.+++. +.+|+++|..+
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~Dtfe 145 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQ 145 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSS
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCC
Confidence 35779999999999999988653 56899999653
No 317
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=94.11 E-value=0.088 Score=39.47 Aligned_cols=43 Identities=14% Similarity=-0.011 Sum_probs=36.4
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCe---EEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGPGTGNMTVKILEQAKK---VIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~~---v~giD~s~~~i~~a~~~~ 92 (149)
.+-+++|+-||.|.++.-+.+.|.+ |.++|+++.+++..+.|+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~ 60 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRH 60 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHT
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhC
Confidence 3458999999999999999888765 489999999998877664
No 318
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.02 E-value=0.074 Score=40.14 Aligned_cols=48 Identities=13% Similarity=0.167 Sum_probs=39.1
Q ss_pred HHHcCCCCCCeEEEEcCC--cchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 43 VDKGAIRPTDTVLEIGPG--TGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 43 ~~~l~~~~~~~vLDiGcG--~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
.......++++||-+|+| .|..+..+++. |.+|++++.+++-.+.+++
T Consensus 137 ~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 187 (340)
T 3gms_A 137 TETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR 187 (340)
T ss_dssp HTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH
T ss_pred HHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 345677789999999997 67777777776 8899999999988888765
No 319
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.01 E-value=0.11 Score=39.44 Aligned_cols=48 Identities=15% Similarity=0.134 Sum_probs=37.8
Q ss_pred HHHcCCCCCCeEEEEcCCc-chhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 43 VDKGAIRPTDTVLEIGPGT-GNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 43 ~~~l~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
+......++++||-+|+|. |.++..+++. +.+|++++.+++-.+.+++
T Consensus 172 l~~~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~ 221 (360)
T 1piw_A 172 LVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK 221 (360)
T ss_dssp HHHTTCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH
T ss_pred HHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 3346677899999999853 7777777765 8899999999988887764
No 320
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=93.96 E-value=0.065 Score=40.85 Aligned_cols=42 Identities=24% Similarity=0.334 Sum_probs=36.2
Q ss_pred CeEEEEcCCcchhHHHHHhcCC---eEEEEeCChhHHhhhhhhhc
Q psy1134 52 DTVLEIGPGTGNMTVKILEQAK---KVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 52 ~~vLDiGcG~G~~~~~l~~~~~---~v~giD~s~~~i~~a~~~~~ 93 (149)
-+++|+.||.|.++.-+.+.|. .|.++|+++.+++..+.|+.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~ 48 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP 48 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC
Confidence 3799999999999999988763 47799999999999887763
No 321
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.89 E-value=0.11 Score=39.62 Aligned_cols=47 Identities=13% Similarity=0.133 Sum_probs=37.6
Q ss_pred HHcCCCCCCeEEEEcCCc-chhHHHHHhc-CC-eEEEEeCChhHHhhhhh
Q psy1134 44 DKGAIRPTDTVLEIGPGT-GNMTVKILEQ-AK-KVIACEIDPSCKSYFPS 90 (149)
Q Consensus 44 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~giD~s~~~i~~a~~ 90 (149)
......++++||-+|+|. |.++..+++. +. +|+++|.+++-.+.+++
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 234 (373)
T 1p0f_A 185 NTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE 234 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence 445667899999999874 7777777776 76 89999999998888764
No 322
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.88 E-value=0.083 Score=36.49 Aligned_cols=46 Identities=17% Similarity=0.294 Sum_probs=34.7
Q ss_pred HcCCCCCCeEEEEcC--CcchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 45 KGAIRPTDTVLEIGP--GTGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 45 ~l~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
.....++++||..|+ |.|..+..++.. |.+|+++|.+++..+.+++
T Consensus 33 ~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~ 81 (198)
T 1pqw_A 33 VGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR 81 (198)
T ss_dssp TSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT
T ss_pred HhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 346678899999995 456666555554 8899999999988877654
No 323
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=93.87 E-value=0.12 Score=39.59 Aligned_cols=47 Identities=19% Similarity=0.293 Sum_probs=37.5
Q ss_pred HHcCCCCCCeEEEEcCCc-chhHHHHHhc-CC-eEEEEeCChhHHhhhhh
Q psy1134 44 DKGAIRPTDTVLEIGPGT-GNMTVKILEQ-AK-KVIACEIDPSCKSYFPS 90 (149)
Q Consensus 44 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~giD~s~~~i~~a~~ 90 (149)
......++++||-+|+|. |..+..+++. +. +|+++|.+++-.+.+++
T Consensus 186 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 235 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV 235 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 445667889999999864 7777777776 76 89999999998888764
No 324
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=93.85 E-value=0.13 Score=39.16 Aligned_cols=49 Identities=20% Similarity=0.361 Sum_probs=39.5
Q ss_pred HHHcCCCCCCeEEEEcCCc-chhHHHHHhc-CCe-EEEEeCChhHHhhhhhh
Q psy1134 43 VDKGAIRPTDTVLEIGPGT-GNMTVKILEQ-AKK-VIACEIDPSCKSYFPSL 91 (149)
Q Consensus 43 ~~~l~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~-v~giD~s~~~i~~a~~~ 91 (149)
+......++++||-+|+|. |.++..+++. |.+ |+++|.+++-.+.+++.
T Consensus 172 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 172 LQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp HHHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH
T ss_pred HHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 3556777899999999875 7777777776 765 99999999999988764
No 325
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=93.78 E-value=0.011 Score=44.13 Aligned_cols=45 Identities=20% Similarity=0.439 Sum_probs=40.4
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhhhhhcc
Q psy1134 50 PTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFPSLYYF 94 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~~~~~~ 94 (149)
.+..+||+=+|||.+++.+...+.+++.+|.++..++..++|+..
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~ 135 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHF 135 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCT
T ss_pred cCCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCc
Confidence 456789999999999999988888999999999999999988753
No 326
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=93.75 E-value=0.089 Score=39.50 Aligned_cols=40 Identities=18% Similarity=0.238 Sum_probs=35.3
Q ss_pred eEEEEcCCcchhHHHHHhcCCe-EEEEeCChhHHhhhhhhh
Q psy1134 53 TVLEIGPGTGNMTVKILEQAKK-VIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 53 ~vLDiGcG~G~~~~~l~~~~~~-v~giD~s~~~i~~a~~~~ 92 (149)
+|||+-||.|.++.-|.+.|.+ |.++|+++.+++.-+.|+
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~ 42 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNH 42 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHC
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHC
Confidence 6999999999999999888765 559999999999888775
No 327
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.73 E-value=0.1 Score=39.96 Aligned_cols=49 Identities=18% Similarity=0.262 Sum_probs=39.2
Q ss_pred HHHcCCCCCCeEEEEcCCc-chhHHHHHhc-CC-eEEEEeCChhHHhhhhhh
Q psy1134 43 VDKGAIRPTDTVLEIGPGT-GNMTVKILEQ-AK-KVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 43 ~~~l~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~giD~s~~~i~~a~~~ 91 (149)
.+.....++++||-+|+|. |.++..+++. +. +|+++|.+++-++.+++.
T Consensus 186 ~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l 237 (378)
T 3uko_A 186 WNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF 237 (378)
T ss_dssp HTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT
T ss_pred HhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc
Confidence 3456667899999999973 7777777776 76 899999999999988753
No 328
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.61 E-value=0.11 Score=39.61 Aligned_cols=47 Identities=21% Similarity=0.263 Sum_probs=38.1
Q ss_pred HHcCCCCCCeEEEEcCCc-chhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 44 DKGAIRPTDTVLEIGPGT-GNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 44 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
+.....++++||-+|+|. |..+..+++. |.+|++++.+++-.+.+++
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 231 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFA 231 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHH
Confidence 445667899999999775 7777777766 8899999999988888765
No 329
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=93.60 E-value=0.14 Score=39.11 Aligned_cols=47 Identities=13% Similarity=0.203 Sum_probs=37.3
Q ss_pred HHcCCCCCCeEEEEcCCc-chhHHHHHhc-CC-eEEEEeCChhHHhhhhh
Q psy1134 44 DKGAIRPTDTVLEIGPGT-GNMTVKILEQ-AK-KVIACEIDPSCKSYFPS 90 (149)
Q Consensus 44 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~giD~s~~~i~~a~~ 90 (149)
......++++||-+|+|. |.++..+++. +. +|+++|.+++-.+.+++
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~ 233 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE 233 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 445667889999999865 6777777766 76 89999999998888764
No 330
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.54 E-value=0.14 Score=39.09 Aligned_cols=47 Identities=17% Similarity=0.210 Sum_probs=37.3
Q ss_pred HHcCCCCCCeEEEEcCCc-chhHHHHHhc-CC-eEEEEeCChhHHhhhhh
Q psy1134 44 DKGAIRPTDTVLEIGPGT-GNMTVKILEQ-AK-KVIACEIDPSCKSYFPS 90 (149)
Q Consensus 44 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~giD~s~~~i~~a~~ 90 (149)
......++++||-+|+|. |.++..+++. +. +|+++|.+++-.+.+++
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 238 (376)
T 1e3i_A 189 NTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA 238 (376)
T ss_dssp TTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 445667899999999874 7777777776 76 89999999998888764
No 331
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=93.52 E-value=0.14 Score=39.04 Aligned_cols=47 Identities=13% Similarity=0.140 Sum_probs=37.3
Q ss_pred HHcCCCCCCeEEEEcCCc-chhHHHHHhc-CC-eEEEEeCChhHHhhhhh
Q psy1134 44 DKGAIRPTDTVLEIGPGT-GNMTVKILEQ-AK-KVIACEIDPSCKSYFPS 90 (149)
Q Consensus 44 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~giD~s~~~i~~a~~ 90 (149)
......++++||-+|+|. |..+..+++. +. +|+++|.+++-.+.+++
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 234 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE 234 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 345667889999999875 7777777766 76 89999999998888764
No 332
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=93.31 E-value=0.15 Score=38.55 Aligned_cols=49 Identities=16% Similarity=0.244 Sum_probs=37.5
Q ss_pred HHHHcCCCCCCeEEEEcC--CcchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 42 IVDKGAIRPTDTVLEIGP--GTGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 42 ~~~~l~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
.+......++++||-+|+ |.|..+..+++. +.+|++++.+++..+.+++
T Consensus 161 ~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~ 212 (347)
T 2hcy_A 161 ALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS 212 (347)
T ss_dssp HHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH
Confidence 334456678899999998 467777666664 8899999999888777654
No 333
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.27 E-value=0.24 Score=37.29 Aligned_cols=48 Identities=19% Similarity=0.257 Sum_probs=37.3
Q ss_pred HHHcCCCCCCeEEEEcCC-cchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 43 VDKGAIRPTDTVLEIGPG-TGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 43 ~~~l~~~~~~~vLDiGcG-~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
+......++++||-+|+| .|..+..+++. +.+|++++.+++-.+.+++
T Consensus 157 l~~~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 206 (339)
T 1rjw_A 157 LKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE 206 (339)
T ss_dssp HHHHTCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 344466789999999985 46666666665 8899999999998888764
No 334
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.11 E-value=0.22 Score=38.09 Aligned_cols=49 Identities=24% Similarity=0.338 Sum_probs=39.2
Q ss_pred HHHcCCCCCCeEEEEcCCc-chhHHHHHhc-CC-eEEEEeCChhHHhhhhhh
Q psy1134 43 VDKGAIRPTDTVLEIGPGT-GNMTVKILEQ-AK-KVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 43 ~~~l~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~giD~s~~~i~~a~~~ 91 (149)
+......++++||-+|+|. |.++..+++. |. +|+++|.+++-.+.+++.
T Consensus 175 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 226 (370)
T 4ej6_A 175 VDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV 226 (370)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc
Confidence 3556777899999999875 7777777776 76 899999999988887653
No 335
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=93.10 E-value=0.13 Score=38.23 Aligned_cols=47 Identities=17% Similarity=0.198 Sum_probs=38.2
Q ss_pred HHcCCCCCCeEEEEcCC-cchhHHHHHhc-CCeEEEEeCChhHHhhhhhh
Q psy1134 44 DKGAIRPTDTVLEIGPG-TGNMTVKILEQ-AKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 44 ~~l~~~~~~~vLDiGcG-~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~~ 91 (149)
......++++||-+|+| .|.++..+++. |.+|++++ |++-.+.+++.
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~l 184 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKR 184 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHc
Confidence 55666789999999996 47778888776 88999999 98888887653
No 336
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=92.98 E-value=0.15 Score=38.21 Aligned_cols=45 Identities=18% Similarity=0.254 Sum_probs=37.4
Q ss_pred HHcCCCCCCeEEEEcC--CcchhHHHHHhc-CCeEEEEeCChhHHhhh
Q psy1134 44 DKGAIRPTDTVLEIGP--GTGNMTVKILEQ-AKKVIACEIDPSCKSYF 88 (149)
Q Consensus 44 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~giD~s~~~i~~a 88 (149)
......++++||-+|+ |.|..+..+++. |.+|++++.+++-.+.+
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 190 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFL 190 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 5567778999999998 567777777665 88999999999988887
No 337
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=92.81 E-value=0.18 Score=37.83 Aligned_cols=47 Identities=17% Similarity=0.229 Sum_probs=36.2
Q ss_pred HHcCCCCCCeEEEEcC--CcchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 44 DKGAIRPTDTVLEIGP--GTGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 44 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
......++++||-.|| |.|..+..++.. |.+|+++|.+++.++.+++
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~ 188 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ 188 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 4456678999999998 566666666554 8899999999988887743
No 338
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=92.68 E-value=0.28 Score=36.97 Aligned_cols=45 Identities=29% Similarity=0.487 Sum_probs=37.3
Q ss_pred CCCCCCeEEEEcCCc-chhHHHHHhc--CCeEEEEeCChhHHhhhhhh
Q psy1134 47 AIRPTDTVLEIGPGT-GNMTVKILEQ--AKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 47 ~~~~~~~vLDiGcG~-G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~ 91 (149)
...++++||-+|+|. |..+..+++. +.+|+++|.+++-.+.+++.
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l 215 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV 215 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc
Confidence 556889999999876 7777788775 67999999999999888653
No 339
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=92.26 E-value=0.32 Score=37.24 Aligned_cols=47 Identities=23% Similarity=0.200 Sum_probs=37.1
Q ss_pred HHcC-CCCCCeEEEEcCC-cchhHHHHHhc-C-CeEEEEeCChhHHhhhhh
Q psy1134 44 DKGA-IRPTDTVLEIGPG-TGNMTVKILEQ-A-KKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 44 ~~l~-~~~~~~vLDiGcG-~G~~~~~l~~~-~-~~v~giD~s~~~i~~a~~ 90 (149)
.... ..++++||-+|+| .|..+..+++. + .+|++++.+++-.+.+++
T Consensus 188 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~ 238 (380)
T 1vj0_A 188 DEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE 238 (380)
T ss_dssp HTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH
T ss_pred HhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH
Confidence 4456 6789999999966 36677777766 7 599999999998888764
No 340
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=92.09 E-value=0.18 Score=40.45 Aligned_cols=41 Identities=10% Similarity=0.114 Sum_probs=35.9
Q ss_pred CeEEEEcCCcchhHHHHHhcCCe-EEEEeCChhHHhhhhhhh
Q psy1134 52 DTVLEIGPGTGNMTVKILEQAKK-VIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 52 ~~vLDiGcG~G~~~~~l~~~~~~-v~giD~s~~~i~~a~~~~ 92 (149)
-+++|+-||.|.++.-+.+.|.+ |.++|+++.+++.-+.|+
T Consensus 89 ~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~ 130 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANH 130 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHS
T ss_pred ceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhc
Confidence 47999999999999999888765 789999999998887775
No 341
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=92.00 E-value=0.21 Score=37.55 Aligned_cols=47 Identities=9% Similarity=0.088 Sum_probs=37.5
Q ss_pred HHcCCCCCCeEEEEcC--CcchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 44 DKGAIRPTDTVLEIGP--GTGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 44 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
......++++||-+|+ |.|..+..+++. |.+|++++.+++.++.+++
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~ 198 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKT 198 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 4456678999999997 567777777665 8899999999988888763
No 342
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=91.85 E-value=0.3 Score=36.77 Aligned_cols=45 Identities=22% Similarity=0.261 Sum_probs=36.9
Q ss_pred cCCCCCCeEEEEcC--CcchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 46 GAIRPTDTVLEIGP--GTGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 46 l~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
....++++||-+|+ |.|..+..+++. +.+|++++.+++.++.+++
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~ 209 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA 209 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 35668899999998 677777777765 8899999999998888764
No 343
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=91.78 E-value=0.5 Score=35.60 Aligned_cols=48 Identities=27% Similarity=0.479 Sum_probs=36.6
Q ss_pred HHHcCCCCCCeEEEEcCC--cchhHHHHHh-c-CCeEEEEeCChhHHhhhhh
Q psy1134 43 VDKGAIRPTDTVLEIGPG--TGNMTVKILE-Q-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 43 ~~~l~~~~~~~vLDiGcG--~G~~~~~l~~-~-~~~v~giD~s~~~i~~a~~ 90 (149)
+......++++||-+|+| .|..+..+++ . +.+|+++|.+++..+.+++
T Consensus 163 l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~ 214 (347)
T 1jvb_A 163 VRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR 214 (347)
T ss_dssp HHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 344667789999999998 5555555544 4 7899999999988888754
No 344
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=91.60 E-value=0.24 Score=37.37 Aligned_cols=47 Identities=30% Similarity=0.521 Sum_probs=38.1
Q ss_pred HHcCCCCCCeEEEEcC--CcchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 44 DKGAIRPTDTVLEIGP--GTGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 44 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
......++++||-+|+ |.|..+..+++. |.+|++++.+++-.+.+++
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 202 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS 202 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 4456678999999997 567777777776 8899999999988887765
No 345
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=91.58 E-value=0.49 Score=35.50 Aligned_cols=50 Identities=20% Similarity=0.349 Sum_probs=36.5
Q ss_pred HHHHcCCCCCCeEEEEcCCcc-hhHHHHHhc--CCeEEEEeCChhHHhhhhhh
Q psy1134 42 IVDKGAIRPTDTVLEIGPGTG-NMTVKILEQ--AKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 42 ~~~~l~~~~~~~vLDiGcG~G-~~~~~l~~~--~~~v~giD~s~~~i~~a~~~ 91 (149)
.+......++++||=+|+|.+ .++..+++. +.+|+++|.+++-.+.+++.
T Consensus 155 ~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~ 207 (348)
T 4eez_A 155 AIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKI 207 (348)
T ss_dssp HHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHT
T ss_pred eecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhc
Confidence 344456678999999999864 444444543 78999999999988877653
No 346
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=91.52 E-value=0.38 Score=36.17 Aligned_cols=45 Identities=16% Similarity=0.349 Sum_probs=35.8
Q ss_pred HcCCCCCCeEEEEcCCc-chhHHHHHhc-CC-eEEEEeCChhHHhhhhh
Q psy1134 45 KGAIRPTDTVLEIGPGT-GNMTVKILEQ-AK-KVIACEIDPSCKSYFPS 90 (149)
Q Consensus 45 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~giD~s~~~i~~a~~ 90 (149)
.... ++++||-+|+|. |..+..+++. +. +|++++.+++-.+.+++
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~ 207 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP 207 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 5566 889999999853 6667677665 77 89999999988888765
No 347
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=91.47 E-value=0.19 Score=38.05 Aligned_cols=67 Identities=7% Similarity=0.035 Sum_probs=39.8
Q ss_pred HHHHhhcccccccccccccCHHHHHHHHHHcCC-----CCCCeEEEEcC------CcchhHHH-HHhcCCeEEEEeCChh
Q psy1134 16 TVWKICIQFNKDFGQHILKNPLIIQSIVDKGAI-----RPTDTVLEIGP------GTGNMTVK-ILEQAKKVIACEIDPS 83 (149)
Q Consensus 16 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~-----~~~~~vLDiGc------G~G~~~~~-l~~~~~~v~giD~s~~ 83 (149)
.+.+|+...+.+-|..+. -.-..++++++.. ..+.+|||+|+ -.|..... +.+.+..|+++|+++-
T Consensus 72 ~l~nyg~~~~lp~g~~~n--v~kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~ 149 (344)
T 3r24_A 72 DLQNYGENAVIPKGIMMN--VAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF 149 (344)
T ss_dssp CCCCCSCCTTSCTTCCHH--HHHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC
T ss_pred ccccCCCCCCCCCCcEee--HHHHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCccc
Confidence 344666666666666543 2223445555532 36889999996 45553111 1222468999999984
Q ss_pred H
Q psy1134 84 C 84 (149)
Q Consensus 84 ~ 84 (149)
-
T Consensus 150 ~ 150 (344)
T 3r24_A 150 V 150 (344)
T ss_dssp B
T ss_pred c
Confidence 3
No 348
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=91.41 E-value=0.35 Score=36.48 Aligned_cols=46 Identities=22% Similarity=0.287 Sum_probs=36.1
Q ss_pred HHcCCCCCCeEEEEcCCc-chhHHHHHhc-CC-eEEEEeCChhHHhhhhh
Q psy1134 44 DKGAIRPTDTVLEIGPGT-GNMTVKILEQ-AK-KVIACEIDPSCKSYFPS 90 (149)
Q Consensus 44 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~giD~s~~~i~~a~~ 90 (149)
..... ++++||-+|+|. |..+..+++. +. +|++++.+++-.+.+++
T Consensus 162 ~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~ 210 (348)
T 2d8a_A 162 LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK 210 (348)
T ss_dssp TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH
T ss_pred HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 44566 889999999963 6667677665 77 99999999988888764
No 349
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.38 E-value=0.34 Score=31.40 Aligned_cols=38 Identities=18% Similarity=0.225 Sum_probs=28.7
Q ss_pred CCeEEEEcCCcchhHHHHHh----cCCeEEEEeCChhHHhhhhh
Q psy1134 51 TDTVLEIGPGTGNMTVKILE----QAKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 51 ~~~vLDiGcG~G~~~~~l~~----~~~~v~giD~s~~~i~~a~~ 90 (149)
.++|+=+||| .++..+++ .+.+|+++|.+++.++.+++
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~ 47 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLED 47 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence 4578888985 45555544 48899999999998887754
No 350
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=91.36 E-value=0.1 Score=40.56 Aligned_cols=21 Identities=19% Similarity=0.221 Sum_probs=18.1
Q ss_pred CCeEEEEcCCcchhHHHHHhc
Q psy1134 51 TDTVLEIGPGTGNMTVKILEQ 71 (149)
Q Consensus 51 ~~~vLDiGcG~G~~~~~l~~~ 71 (149)
.-+|+|+||++|..|..+...
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ 73 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRD 73 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHH
T ss_pred ceEEEecCCCCCchHHHHHHH
Confidence 467999999999999987665
No 351
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=91.21 E-value=0.34 Score=37.47 Aligned_cols=45 Identities=36% Similarity=0.498 Sum_probs=35.9
Q ss_pred CCCCCCeEEEEcCCc-chhHHHHHhc-CC-eEEEEeCChhHHhhhhhh
Q psy1134 47 AIRPTDTVLEIGPGT-GNMTVKILEQ-AK-KVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 47 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~giD~s~~~i~~a~~~ 91 (149)
...++++||=+|+|. |.++..+++. |. +|+++|.+++-.+.+++.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l 257 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL 257 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc
Confidence 556889999999864 6666677766 76 899999999998888653
No 352
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=91.10 E-value=0.48 Score=36.01 Aligned_cols=47 Identities=19% Similarity=0.323 Sum_probs=37.7
Q ss_pred HHcCCCCCCeEEEEc--CCcchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 44 DKGAIRPTDTVLEIG--PGTGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 44 ~~l~~~~~~~vLDiG--cG~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
......++++||-+| .|.|..+..+++. |.+|++++.+++-.+.+++
T Consensus 157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~ 206 (362)
T 2c0c_A 157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS 206 (362)
T ss_dssp HHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence 344667899999999 5678888887776 8899999999988887764
No 353
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=91.01 E-value=0.31 Score=36.39 Aligned_cols=46 Identities=15% Similarity=0.254 Sum_probs=37.1
Q ss_pred HcCCCCCCeEEEEc--CCcchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 45 KGAIRPTDTVLEIG--PGTGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 45 ~l~~~~~~~vLDiG--cG~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
.....++++||-+| .|.|..+..+++. |.+|++++.+++-.+.+++
T Consensus 135 ~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 183 (325)
T 3jyn_A 135 TYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA 183 (325)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH
T ss_pred hcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 34667899999998 3567777777776 8899999999998888765
No 354
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=91.01 E-value=0.52 Score=35.46 Aligned_cols=43 Identities=14% Similarity=0.227 Sum_probs=34.7
Q ss_pred CCCCCCeEEEEcCCc-chhHHHHHhc---CCeEEEEeCChhHHhhhhh
Q psy1134 47 AIRPTDTVLEIGPGT-GNMTVKILEQ---AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 47 ~~~~~~~vLDiGcG~-G~~~~~l~~~---~~~v~giD~s~~~i~~a~~ 90 (149)
.. ++++||-+|+|. |.++..+++. +.+|++++.|++-.+.+++
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~ 214 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE 214 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH
Confidence 66 899999999964 6666666653 6899999999998888765
No 355
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=90.99 E-value=0.27 Score=36.27 Aligned_cols=43 Identities=21% Similarity=0.295 Sum_probs=34.9
Q ss_pred CCCCCeEEEEcC--CcchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 48 IRPTDTVLEIGP--GTGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 48 ~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
..++++||-+|+ |.|..+..+++. |.+|++++.+++-.+.+++
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 168 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA 168 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 668899999998 567777777765 8899999999888777654
No 356
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=90.92 E-value=0.53 Score=30.64 Aligned_cols=38 Identities=11% Similarity=0.111 Sum_probs=28.3
Q ss_pred CCeEEEEcCCcchhHHHHH----hcCCeEEEEeCChhHHhhhhh
Q psy1134 51 TDTVLEIGPGTGNMTVKIL----EQAKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 51 ~~~vLDiGcG~G~~~~~l~----~~~~~v~giD~s~~~i~~a~~ 90 (149)
.++|+=+||| .++..++ +.+..|+++|.+++.++.+++
T Consensus 7 ~~~viIiG~G--~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~ 48 (140)
T 3fwz_A 7 CNHALLVGYG--RVGSLLGEKLLASDIPLVVIETSRTRVDELRE 48 (140)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH
T ss_pred CCCEEEECcC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH
Confidence 4578888885 4444443 448899999999999988764
No 357
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=90.89 E-value=0.63 Score=35.25 Aligned_cols=47 Identities=19% Similarity=0.180 Sum_probs=35.5
Q ss_pred HHHcCCC-CCCeEEEEcCC-cchhHHHHHhc-CCeEEEEeCChhHHhhhh
Q psy1134 43 VDKGAIR-PTDTVLEIGPG-TGNMTVKILEQ-AKKVIACEIDPSCKSYFP 89 (149)
Q Consensus 43 ~~~l~~~-~~~~vLDiGcG-~G~~~~~l~~~-~~~v~giD~s~~~i~~a~ 89 (149)
+...... ++++||-+|+| .|..+..+++. +.+|++++.+++-.+.++
T Consensus 172 l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~ 221 (357)
T 2cf5_A 172 LSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEAL 221 (357)
T ss_dssp HHHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHH
T ss_pred HHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Confidence 3445666 88999999976 35566666665 889999999988877765
No 358
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=90.70 E-value=0.42 Score=36.23 Aligned_cols=46 Identities=15% Similarity=0.253 Sum_probs=35.8
Q ss_pred HcCCCCCCeEEEEcC--CcchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 45 KGAIRPTDTVLEIGP--GTGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 45 ~l~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
.....++++||-.|+ |.|..+..+++. |.+|++++.+++..+.+++
T Consensus 165 ~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 213 (351)
T 1yb5_A 165 SACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ 213 (351)
T ss_dssp TSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred hhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Confidence 456678899999997 556666666655 8899999999988887654
No 359
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=90.09 E-value=0.87 Score=34.61 Aligned_cols=48 Identities=23% Similarity=0.260 Sum_probs=35.3
Q ss_pred HHHHcCCC-CCCeEEEEcCCc-chhHHHHHhc-CCeEEEEeCChhHHhhhh
Q psy1134 42 IVDKGAIR-PTDTVLEIGPGT-GNMTVKILEQ-AKKVIACEIDPSCKSYFP 89 (149)
Q Consensus 42 ~~~~l~~~-~~~~vLDiGcG~-G~~~~~l~~~-~~~v~giD~s~~~i~~a~ 89 (149)
.+...... ++++||-+|+|. |..+..+++. +.+|++++.+++-.+.++
T Consensus 178 al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 228 (366)
T 1yqd_A 178 PLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEAL 228 (366)
T ss_dssp HHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHH
T ss_pred HHHhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 34455666 789999999753 5555566655 889999999998777765
No 360
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=89.77 E-value=0.42 Score=35.77 Aligned_cols=45 Identities=18% Similarity=0.171 Sum_probs=36.0
Q ss_pred cCCCCCCeEEEEcC--CcchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 46 GAIRPTDTVLEIGP--GTGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 46 l~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
....++++||-+|+ |.|..+..+++. |.+|++++.+++-.+.+++
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 191 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE 191 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 46678999999995 566677777665 8899999999998887765
No 361
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=89.47 E-value=0.46 Score=35.39 Aligned_cols=46 Identities=15% Similarity=0.136 Sum_probs=35.2
Q ss_pred HcCCCCCCeEEEEcC--CcchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 45 KGAIRPTDTVLEIGP--GTGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 45 ~l~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
.....++++||-.|+ |.|..+..+++. |.+|++++.+++..+.+++
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~ 183 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK 183 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 446668899999994 556666666654 8899999999988877754
No 362
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=88.97 E-value=0.83 Score=34.12 Aligned_cols=46 Identities=20% Similarity=0.215 Sum_probs=35.7
Q ss_pred HcCCCCCCeEEEEcC--CcchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 45 KGAIRPTDTVLEIGP--GTGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 45 ~l~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
.....++++||-.|+ |.|..+..+++. +.+|++++.+++..+.+++
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~ 188 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK 188 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 346668899999995 667777666655 8899999999987777654
No 363
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=88.68 E-value=0.49 Score=35.82 Aligned_cols=47 Identities=15% Similarity=0.200 Sum_probs=36.8
Q ss_pred HHcCCCCCCeEEEEc--CCcchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 44 DKGAIRPTDTVLEIG--PGTGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 44 ~~l~~~~~~~vLDiG--cG~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
......++++||-+| .|.|..+..+++. |.+|++++.+++-.+.+++
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 210 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER 210 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 345667889999995 3467777777766 8899999999998888765
No 364
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=88.54 E-value=1.1 Score=30.64 Aligned_cols=43 Identities=16% Similarity=0.298 Sum_probs=33.2
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhc--CCeEEEEe
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQ--AKKVIACE 79 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD 79 (149)
.....+......- -...|||+|-|.|..--+|.+. +..|+.+|
T Consensus 27 R~~L~~a~~~v~~-~~GpVlElGLGNGRTydHLRe~~P~R~I~vfD 71 (174)
T 3iht_A 27 RACLEHAIAQTAG-LSGPVYELGLGNGRTYHHLRQHVQGREIYVFE 71 (174)
T ss_dssp HHHHHHHHHHTTT-CCSCEEEECCTTCHHHHHHHHHCCSSCEEEEE
T ss_pred HHHHHHHHHHhcC-CCCceEEecCCCChhHHHHHHhCCCCcEEEEE
Confidence 3445555555553 3457999999999999999998 78899998
No 365
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=88.20 E-value=0.56 Score=35.48 Aligned_cols=46 Identities=13% Similarity=0.137 Sum_probs=35.3
Q ss_pred HcCCCCCCeEEEEcC--CcchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 45 KGAIRPTDTVLEIGP--GTGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 45 ~l~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
.....++++||-.|+ |.|..+..+++. |.+|++++.+++.++.+++
T Consensus 157 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 205 (354)
T 2j8z_A 157 VGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEK 205 (354)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred hcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 445668899999984 566666666655 8899999999988887743
No 366
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=88.02 E-value=0.99 Score=29.76 Aligned_cols=38 Identities=11% Similarity=0.178 Sum_probs=28.2
Q ss_pred CCCeEEEEcCCcchhHHHHHh----cCCeEEEEeCChhHHhhhh
Q psy1134 50 PTDTVLEIGPGTGNMTVKILE----QAKKVIACEIDPSCKSYFP 89 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~----~~~~v~giD~s~~~i~~a~ 89 (149)
++++|+=+||| .++..+++ .+.+|+++|.+++.++.++
T Consensus 18 ~~~~v~IiG~G--~iG~~la~~L~~~g~~V~vid~~~~~~~~~~ 59 (155)
T 2g1u_A 18 KSKYIVIFGCG--RLGSLIANLASSSGHSVVVVDKNEYAFHRLN 59 (155)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCGGGGGGSC
T ss_pred CCCcEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence 56789999874 55544433 3789999999998877665
No 367
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=87.58 E-value=1 Score=33.99 Aligned_cols=47 Identities=19% Similarity=0.175 Sum_probs=35.9
Q ss_pred HHcCCCCC--CeEEEEcC--CcchhHHHHHhc-CC-eEEEEeCChhHHhhhhh
Q psy1134 44 DKGAIRPT--DTVLEIGP--GTGNMTVKILEQ-AK-KVIACEIDPSCKSYFPS 90 (149)
Q Consensus 44 ~~l~~~~~--~~vLDiGc--G~G~~~~~l~~~-~~-~v~giD~s~~~i~~a~~ 90 (149)
......++ ++||-.|+ |.|..+..+++. |. +|++++.+++-.+.+++
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~ 204 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTS 204 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHH
Confidence 55667788 99999998 556666666554 77 99999999887777765
No 368
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=87.52 E-value=0.58 Score=36.58 Aligned_cols=42 Identities=14% Similarity=-0.032 Sum_probs=35.2
Q ss_pred CeEEEEcCCcchhHHHHHhcC---Ce----EEEEeCChhHHhhhhhhhc
Q psy1134 52 DTVLEIGPGTGNMTVKILEQA---KK----VIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 52 ~~vLDiGcG~G~~~~~l~~~~---~~----v~giD~s~~~i~~a~~~~~ 93 (149)
-+|+|+-||.|.+..-|.+.| .- |.++|+++.+++.-+.++.
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcC
Confidence 479999999999999998875 23 7789999999988777653
No 369
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=87.31 E-value=1.8 Score=32.33 Aligned_cols=52 Identities=19% Similarity=0.199 Sum_probs=37.6
Q ss_pred HHHHHHcCCCCCCeEEEEcCCc-chhHHHHHhc-CC-eEEEEeCChhHHhhhhhh
Q psy1134 40 QSIVDKGAIRPTDTVLEIGPGT-GNMTVKILEQ-AK-KVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 40 ~~~~~~l~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~giD~s~~~i~~a~~~ 91 (149)
..........++++||=.|+|. |.++..+++. +. .++++|.+++-.+.+++.
T Consensus 150 ~~~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l 204 (346)
T 4a2c_A 150 LHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF 204 (346)
T ss_dssp HHHHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT
T ss_pred HHHHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc
Confidence 3345566777899999999864 5555556655 54 578999999988887653
No 370
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=87.28 E-value=0.75 Score=40.11 Aligned_cols=41 Identities=15% Similarity=0.115 Sum_probs=35.8
Q ss_pred CeEEEEcCCcchhHHHHHhcCC--eEEEEeCChhHHhhhhhhh
Q psy1134 52 DTVLEIGPGTGNMTVKILEQAK--KVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 52 ~~vLDiGcG~G~~~~~l~~~~~--~v~giD~s~~~i~~a~~~~ 92 (149)
-+++|+-||.|.++.-|.+.|. .|.++|+++.+++..+.|+
T Consensus 541 l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~ 583 (1002)
T 3swr_A 541 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNN 583 (1002)
T ss_dssp EEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHC
T ss_pred CeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC
Confidence 3799999999999999988885 4779999999999887764
No 371
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=87.20 E-value=0.67 Score=35.05 Aligned_cols=47 Identities=9% Similarity=0.180 Sum_probs=34.9
Q ss_pred HHcCCCCC------CeEEEEcCCc-chhH-HHHH-hc-CCe-EEEEeCChh---HHhhhhh
Q psy1134 44 DKGAIRPT------DTVLEIGPGT-GNMT-VKIL-EQ-AKK-VIACEIDPS---CKSYFPS 90 (149)
Q Consensus 44 ~~l~~~~~------~~vLDiGcG~-G~~~-~~l~-~~-~~~-v~giD~s~~---~i~~a~~ 90 (149)
......++ ++||-+|+|. |.++ ..++ +. +.+ |++++.+++ -.+.+++
T Consensus 160 ~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~ 220 (357)
T 2b5w_A 160 EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE 220 (357)
T ss_dssp HHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH
T ss_pred HhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH
Confidence 33444567 8999999853 7777 7777 65 776 999999988 7777754
No 372
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=87.10 E-value=0.36 Score=36.04 Aligned_cols=46 Identities=24% Similarity=0.407 Sum_probs=35.5
Q ss_pred HcCCCCCC-eEEEEcC--CcchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 45 KGAIRPTD-TVLEIGP--GTGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 45 ~l~~~~~~-~vLDiGc--G~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
.....+++ +||-+|+ |.|..+..+++. |.+|++++.+++-.+.+++
T Consensus 143 ~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~ 192 (328)
T 1xa0_A 143 EHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV 192 (328)
T ss_dssp HTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH
T ss_pred hcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 34555665 8999997 667777777776 8899999999887777754
No 373
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=86.74 E-value=0.58 Score=39.40 Aligned_cols=41 Identities=17% Similarity=0.175 Sum_probs=34.9
Q ss_pred CeEEEEcCCcchhHHHHHhcC-------CeEEEEeCChhHHhhhhhhh
Q psy1134 52 DTVLEIGPGTGNMTVKILEQA-------KKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 52 ~~vLDiGcG~G~~~~~l~~~~-------~~v~giD~s~~~i~~a~~~~ 92 (149)
.+|||+-||.|-++.-|.+.| .-+.++|+++.+++.-+.|+
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 469999999999999987764 35679999999999888774
No 374
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=86.19 E-value=1.8 Score=31.47 Aligned_cols=44 Identities=18% Similarity=0.183 Sum_probs=35.5
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhhhc
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSLYY 93 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~~~ 93 (149)
+++.+|=-|.+.|+ .+..|++.|++|+.+|.+++-++.+.+.+.
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~ 52 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELR 52 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHH
Confidence 68899999999887 455567779999999999998887766543
No 375
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=85.73 E-value=1.7 Score=27.45 Aligned_cols=38 Identities=11% Similarity=0.188 Sum_probs=27.2
Q ss_pred CCeEEEEcCCcchhHHHHHh----cCCeEEEEeCChhHHhhhhh
Q psy1134 51 TDTVLEIGPGTGNMTVKILE----QAKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 51 ~~~vLDiGcG~G~~~~~l~~----~~~~v~giD~s~~~i~~a~~ 90 (149)
+.+|+=+|+ |.++..+++ .+.+|+++|.+++.++.+++
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~ 45 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA 45 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence 357888876 566655544 37899999999988776654
No 376
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=85.69 E-value=0.6 Score=34.67 Aligned_cols=38 Identities=29% Similarity=0.433 Sum_probs=32.2
Q ss_pred eEEEEcC--CcchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 53 TVLEIGP--GTGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 53 ~vLDiGc--G~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
+||=+|+ |.|..+..+++. |.+|++++.+++-.+.+++
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~ 189 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS 189 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 4999997 678888888877 8899999999998888865
No 377
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=85.67 E-value=0.55 Score=35.03 Aligned_cols=45 Identities=24% Similarity=0.510 Sum_probs=34.6
Q ss_pred cCCCCCC-eEEEEcC--CcchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 46 GAIRPTD-TVLEIGP--GTGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 46 l~~~~~~-~vLDiGc--G~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
....+++ +||-+|+ |.|..+..+++. |.+|++++.+++-.+.+++
T Consensus 145 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~ 193 (330)
T 1tt7_A 145 NGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ 193 (330)
T ss_dssp TTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH
T ss_pred cCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 4555665 8999997 567777777766 8899999999877777754
No 378
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=85.60 E-value=2.5 Score=31.91 Aligned_cols=45 Identities=22% Similarity=0.349 Sum_probs=33.7
Q ss_pred cCCCCCCeEEEEcCC-cchhHHHHHh-c-CCeEEEEeCChhHHhhhhh
Q psy1134 46 GAIRPTDTVLEIGPG-TGNMTVKILE-Q-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 46 l~~~~~~~vLDiGcG-~G~~~~~l~~-~-~~~v~giD~s~~~i~~a~~ 90 (149)
....++++||-+|+| .|.++..+++ . +.+|+++|.+++-.+.+++
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~ 229 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER 229 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 566789999999985 2444444554 3 7899999999988888764
No 379
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=85.19 E-value=0.76 Score=36.41 Aligned_cols=37 Identities=16% Similarity=0.315 Sum_probs=26.3
Q ss_pred CeEEEEcCCcchhHHH----HHhcCCeEEEEeCChhHHhhhhh
Q psy1134 52 DTVLEIGPGTGNMTVK----ILEQAKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 52 ~~vLDiGcG~G~~~~~----l~~~~~~v~giD~s~~~i~~a~~ 90 (149)
.+|-=||+| +.+++ |++.|.+|+|+|++++-++..++
T Consensus 22 ~~IaViGlG--YVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~ 62 (444)
T 3vtf_A 22 ASLSVLGLG--YVGVVHAVGFALLGHRVVGYDVNPSIVERLRA 62 (444)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHHTCEEEEECSCHHHHHHHHT
T ss_pred CEEEEEccC--HHHHHHHHHHHhCCCcEEEEECCHHHHHHHHC
Confidence 356666554 54444 45558999999999998887653
No 380
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=84.66 E-value=1.4 Score=32.69 Aligned_cols=51 Identities=10% Similarity=0.130 Sum_probs=40.7
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhh
Q psy1134 36 PLIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFP 89 (149)
Q Consensus 36 ~~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~ 89 (149)
..+..++.+.++.. ..+.+|+-||+|.....+.. .+++..|++++.+..-+
T Consensus 22 ~~l~~~i~~~lp~~-~~~yvEpF~GggaV~~~~~~--~~~i~ND~n~~Lin~y~ 72 (284)
T 2dpm_A 22 RQLLPVIRELIPKT-YNRYFEPFVGGGALFFDLAP--KDAVINDFNAELINCYQ 72 (284)
T ss_dssp GGGHHHHHHHSCSS-CSCEEETTCTTCHHHHHHCC--SEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHhccc-cCEEEeecCCccHHHHhhhc--cceeeeecchHHHHHHH
Confidence 34577788888753 46899999999999887743 68999999999988753
No 381
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=84.57 E-value=0.2 Score=38.57 Aligned_cols=69 Identities=4% Similarity=-0.030 Sum_probs=43.8
Q ss_pred CCeEEEEcCCcchhHHHHHhc------------------CCeEEEEeCChhHHhhhhhhhcc-----cCeee--------
Q psy1134 51 TDTVLEIGPGTGNMTVKILEQ------------------AKKVIACEIDPSCKSYFPSLYYF-----RNLCL-------- 99 (149)
Q Consensus 51 ~~~vLDiGcG~G~~~~~l~~~------------------~~~v~giD~s~~~i~~a~~~~~~-----~~~~~-------- 99 (149)
.-+|+|+||++|..|+.+... ..+|+..|+-.+.-..+-+.+.. ...-.
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 346999999999988876554 13688999888877766544321 11111
Q ss_pred -cc-CCCCCcchhhHHHHhcccc
Q psy1134 100 -QE-VPTDFDIKTLIDTVLNEIN 120 (149)
Q Consensus 100 -~~-~~~~~d~v~~~~~~l~~~~ 120 (149)
.. ...++|++.+. ..|+.+.
T Consensus 132 ~rlfp~~S~d~v~Ss-~aLHWls 153 (359)
T 1m6e_X 132 GRLFPRNTLHFIHSS-YSLMWLS 153 (359)
T ss_dssp SCCSCTTCBSCEEEE-SCTTBCS
T ss_pred hccCCCCceEEEEeh-hhhhhcc
Confidence 11 23578888765 5556543
No 382
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=84.48 E-value=0.96 Score=35.48 Aligned_cols=45 Identities=18% Similarity=0.263 Sum_probs=36.8
Q ss_pred cCCCCCCeEEEEcC--CcchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 46 GAIRPTDTVLEIGP--GTGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 46 l~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
....++++||=+|+ |.|.++..+++. |.+|++++.+++-++.+++
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~ 271 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRA 271 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHh
Confidence 45668899999997 567777777776 8899999999998888865
No 383
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=84.38 E-value=1.1 Score=33.62 Aligned_cols=46 Identities=26% Similarity=0.390 Sum_probs=36.3
Q ss_pred HHcCCCCCCeEEEEcC--CcchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 44 DKGAIRPTDTVLEIGP--GTGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 44 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
+.....++++||-+|+ |.|..+..+++. +.+|+++ .+++-++.+++
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~ 192 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRD 192 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHH
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHH
Confidence 4556678999999994 457777777776 8899999 88888887765
No 384
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=84.30 E-value=1.4 Score=28.01 Aligned_cols=38 Identities=21% Similarity=0.357 Sum_probs=28.2
Q ss_pred CCeEEEEcCCcchhHHHHHhc----CCeEEEEeCChhHHhhhhh
Q psy1134 51 TDTVLEIGPGTGNMTVKILEQ----AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 51 ~~~vLDiGcG~G~~~~~l~~~----~~~v~giD~s~~~i~~a~~ 90 (149)
+++|+=+|+ |.++..+++. +.+|+++|.+++.++.+++
T Consensus 6 ~~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~ 47 (144)
T 2hmt_A 6 NKQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS 47 (144)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 457898997 6666665543 7899999999988776543
No 385
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=84.21 E-value=0.26 Score=46.81 Aligned_cols=67 Identities=15% Similarity=0.117 Sum_probs=43.1
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-C------CeEEEEeCChhHHhhhhhhhcccCeee-----cc----CCCCCcchhhHH
Q psy1134 50 PTDTVLEIGPGTGNMTVKILEQ-A------KKVIACEIDPSCKSYFPSLYYFRNLCL-----QE----VPTDFDIKTLID 113 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~-~------~~v~giD~s~~~i~~a~~~~~~~~~~~-----~~----~~~~~d~v~~~~ 113 (149)
+..+|||||.|+|..+..+.+. + .+++-.|+|+...+.+++++..-++.. .. ....||+|+..
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~- 1318 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCN- 1318 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEE-
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEc-
Confidence 3568999999999887765543 1 268889999999988888764333322 01 23468888755
Q ss_pred HHhc
Q psy1134 114 TVLN 117 (149)
Q Consensus 114 ~~l~ 117 (149)
++++
T Consensus 1319 ~vl~ 1322 (2512)
T 2vz8_A 1319 CALA 1322 (2512)
T ss_dssp CC--
T ss_pred cccc
Confidence 5544
No 386
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=84.12 E-value=1.7 Score=32.88 Aligned_cols=40 Identities=15% Similarity=0.224 Sum_probs=29.3
Q ss_pred CCeEEEEcCCc-chhHHHHHhc-CCeEEEEeCCh---hHHhhhhh
Q psy1134 51 TDTVLEIGPGT-GNMTVKILEQ-AKKVIACEIDP---SCKSYFPS 90 (149)
Q Consensus 51 ~~~vLDiGcG~-G~~~~~l~~~-~~~v~giD~s~---~~i~~a~~ 90 (149)
+++||-+|+|. |..+..+++. |.+|++++.++ +-.+.+++
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~ 225 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEE 225 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHH
Confidence 89999999832 4455555554 88999999988 66666653
No 387
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=83.94 E-value=1.7 Score=32.58 Aligned_cols=41 Identities=20% Similarity=0.298 Sum_probs=32.7
Q ss_pred CCCeEEEEc-C-CcchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 50 PTDTVLEIG-P-GTGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 50 ~~~~vLDiG-c-G~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
++++||-+| + |.|..+..+++. |.+|++++.+++-.+.+++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 193 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK 193 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 788999994 3 347777777766 8899999999988888765
No 388
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=83.48 E-value=3 Score=29.81 Aligned_cols=44 Identities=11% Similarity=0.006 Sum_probs=32.0
Q ss_pred CCCCeEEEEcCCcchh---HHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 49 RPTDTVLEIGPGTGNM---TVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~---~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
.+++++|=.|++.|+- +..|++.|.+|+.++-+++-++.+.+.+
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 73 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREI 73 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 4678899999876643 3345556899999999988777665443
No 389
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=83.44 E-value=1 Score=35.11 Aligned_cols=45 Identities=16% Similarity=0.272 Sum_probs=36.2
Q ss_pred cCCCCCCeEEEEcC--CcchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 46 GAIRPTDTVLEIGP--GTGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 46 l~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
....++++||-.|+ |.|..+..+++. |.+|++++.+++-.+.+++
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~ 263 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA 263 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 55668899999997 457777777766 8899999999998888764
No 390
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=82.89 E-value=0.7 Score=34.02 Aligned_cols=35 Identities=57% Similarity=1.024 Sum_probs=28.1
Q ss_pred HhccccchhHhhccCChhhHHHHHHhhhccCcccC
Q psy1134 115 VLNEINFADKRARTMDLDDFVLLLATFNKHGIHFA 149 (149)
Q Consensus 115 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (149)
.+.....+.++...++..+|+++...+...|+||+
T Consensus 251 ~l~~~~~~~~R~e~l~~~~f~~l~~~~~~~~~~~~ 285 (285)
T 1zq9_A 251 ILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 285 (285)
T ss_dssp HHHHHTCTTCBGGGCCHHHHHHHHHHHHTTTCCCC
T ss_pred HHHhCCCCCCChhhCCHHHHHHHHHHHHHcCCCCC
Confidence 34433333568999999999999999999999996
No 391
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=82.48 E-value=1.5 Score=33.43 Aligned_cols=42 Identities=12% Similarity=0.087 Sum_probs=32.1
Q ss_pred CCCCeEEEEcCCc---chhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 49 RPTDTVLEIGPGT---GNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 49 ~~~~~vLDiGcG~---G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
.++++||=+|+|+ |..+..+++. +.+|++++.+++-.+.+++
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~ 214 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA 214 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh
Confidence 5788999986554 4555555555 8899999999999888865
No 392
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=82.46 E-value=3.6 Score=31.16 Aligned_cols=41 Identities=12% Similarity=0.154 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCcchhHHHHHhc--CCeEEEEeCChhHHhhhhhh
Q psy1134 50 PTDTVLEIGPGTGNMTVKILEQ--AKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~~ 91 (149)
+...|+.+|||.......+... +..++-||. |+.++.-++.
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~ 139 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSI 139 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHH
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHH
Confidence 4568999999999999998874 456777776 7777764443
No 393
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=81.85 E-value=3.9 Score=28.85 Aligned_cols=43 Identities=12% Similarity=0.220 Sum_probs=32.4
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++.+++-++.+.+.+
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~ 53 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQI 53 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH
Confidence 57789999987764 44455666999999999998877765543
No 394
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=81.72 E-value=1.5 Score=33.25 Aligned_cols=41 Identities=29% Similarity=0.512 Sum_probs=34.1
Q ss_pred CCCeEEEEc-C-CcchhHHHHHhc--CCeEEEEeCChhHHhhhhh
Q psy1134 50 PTDTVLEIG-P-GTGNMTVKILEQ--AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 50 ~~~~vLDiG-c-G~G~~~~~l~~~--~~~v~giD~s~~~i~~a~~ 90 (149)
++++||=+| + |.|.++..+++. +.+|++++.+++-.+.+++
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~ 215 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS 215 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH
Confidence 678899998 4 458888888875 7899999999988888765
No 395
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=81.55 E-value=1.2 Score=32.94 Aligned_cols=36 Identities=44% Similarity=0.801 Sum_probs=29.5
Q ss_pred HHhccccchhHhhccCChhhHHHHHHhhhccCcccC
Q psy1134 114 TVLNEINFADKRARTMDLDDFVLLLATFNKHGIHFA 149 (149)
Q Consensus 114 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (149)
..+.......++...++..+|+++...+...|+||+
T Consensus 262 ~~l~~~~~~~~R~e~l~~~~f~~l~~~~~~~~~~~~ 297 (299)
T 2h1r_A 262 DVLEHLDMCEKRSINLDENDFLKLLLEFNKKGIHFF 297 (299)
T ss_dssp HHHHHTTCTTCBGGGCCHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHhCCCCCCChhhCCHHHHHHHHHHHHhCCCCcC
Confidence 445544444579999999999999999999999995
No 396
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=81.54 E-value=2.3 Score=25.94 Aligned_cols=37 Identities=14% Similarity=0.179 Sum_probs=27.3
Q ss_pred CCeEEEEcCCcchhHHHHHh----cC-CeEEEEeCChhHHhhhh
Q psy1134 51 TDTVLEIGPGTGNMTVKILE----QA-KKVIACEIDPSCKSYFP 89 (149)
Q Consensus 51 ~~~vLDiGcG~G~~~~~l~~----~~-~~v~giD~s~~~i~~a~ 89 (149)
+++|+=+|+ |.++..+++ .+ .+|+++|.+++-++.+.
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~ 46 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN 46 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH
Confidence 467999998 555555443 47 78999999998777654
No 397
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=81.37 E-value=4 Score=29.98 Aligned_cols=43 Identities=7% Similarity=0.048 Sum_probs=34.7
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
+++.+|=-|.+.|+ .+..|++.|++|+.+|.+++.++.+.+.+
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~ 73 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI 73 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc
Confidence 68899999999886 45556777999999999999888765543
No 398
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=80.95 E-value=2.1 Score=38.43 Aligned_cols=42 Identities=14% Similarity=0.113 Sum_probs=36.3
Q ss_pred CCeEEEEcCCcchhHHHHHhcCC--eEEEEeCChhHHhhhhhhh
Q psy1134 51 TDTVLEIGPGTGNMTVKILEQAK--KVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 51 ~~~vLDiGcG~G~~~~~l~~~~~--~v~giD~s~~~i~~a~~~~ 92 (149)
.-+++|+-||.|.++.-|.+.|. .|.++|+++.+++..+.|+
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~ 894 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNN 894 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHC
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC
Confidence 34799999999999999988875 4779999999999877764
No 399
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=80.81 E-value=3.4 Score=30.03 Aligned_cols=43 Identities=16% Similarity=0.142 Sum_probs=34.2
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
+++.+|=-|++.|+ .+..|++.|++|+.+|.+++.++.+.+.+
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l 53 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTL 53 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 68899999998886 34556777999999999998887765544
No 400
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=80.53 E-value=4.1 Score=29.01 Aligned_cols=43 Identities=19% Similarity=0.085 Sum_probs=32.6
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++-+++-++.+.+.+
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 51 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEI 51 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 57789999998875 44455666999999999988777665543
No 401
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=80.48 E-value=1.9 Score=31.82 Aligned_cols=48 Identities=15% Similarity=0.197 Sum_probs=38.3
Q ss_pred HHHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhh
Q psy1134 37 LIIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYF 88 (149)
Q Consensus 37 ~~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a 88 (149)
.+..++.+.++. ..+.+|+-||+|.....+. ..+++..|++++.+..-
T Consensus 16 ~l~~~i~~~~p~--~~~yvEpF~Ggg~V~~~~~--~~~~i~ND~n~~lin~y 63 (278)
T 2g1p_A 16 PLLDDIKRHLPK--GECLVEPFVGAGSVFLNTD--FSRYILADINSDLISLY 63 (278)
T ss_dssp GGHHHHHHHCCC--CSEEEETTCTTCHHHHTCC--CSEEEEEESCHHHHHHH
T ss_pred HHHHHHHHhccc--cCeEEeeccCccHHHHhhc--ccceEEEeccHHHHHHH
Confidence 356778788874 5799999999999987653 46899999999998543
No 402
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=79.94 E-value=3.4 Score=30.56 Aligned_cols=48 Identities=17% Similarity=0.412 Sum_probs=35.6
Q ss_pred HHHHcCCCCCCeEEEEc--CCcchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 42 IVDKGAIRPTDTVLEIG--PGTGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 42 ~~~~l~~~~~~~vLDiG--cG~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
.++.....++++||=+| .|.|..+..+++. |.+|++++ +++-.+.+++
T Consensus 144 al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~ 194 (321)
T 3tqh_A 144 ALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKA 194 (321)
T ss_dssp HHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHH
Confidence 33566778899999996 4468888888776 88999998 5544666654
No 403
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=78.97 E-value=1.5 Score=34.19 Aligned_cols=38 Identities=16% Similarity=0.136 Sum_probs=28.8
Q ss_pred CCeEEEEcCCcchhHHHHHh----cCCeEEEEeCChhHHhhhhh
Q psy1134 51 TDTVLEIGPGTGNMTVKILE----QAKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 51 ~~~vLDiGcG~G~~~~~l~~----~~~~v~giD~s~~~i~~a~~ 90 (149)
..+|+=+|+ |.++..+++ .+..|+++|.+++.++.+++
T Consensus 4 ~~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~ 45 (413)
T 3l9w_A 4 GMRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK 45 (413)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH
T ss_pred CCeEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh
Confidence 456888777 555555544 38899999999999998764
No 404
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=78.52 E-value=3 Score=28.04 Aligned_cols=40 Identities=23% Similarity=0.268 Sum_probs=28.1
Q ss_pred CCeEEEEcCCc-ch-hHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 51 TDTVLEIGPGT-GN-MTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 51 ~~~vLDiGcG~-G~-~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
+++|+=+|||. |. ++..|.+. +.+|+++|.+++.++.+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~ 81 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS 81 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH
Confidence 56888888753 22 22334555 7899999999998877654
No 405
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=78.42 E-value=5.2 Score=29.32 Aligned_cols=44 Identities=7% Similarity=0.116 Sum_probs=33.2
Q ss_pred CCCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 49 RPTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
.+++.+|=.|++.|+ ++..|+++|.+|+.++-+++-++.+.+.+
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l 75 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGL 75 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 367889999998774 34445666999999999998877765543
No 406
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=78.21 E-value=2.9 Score=31.51 Aligned_cols=41 Identities=20% Similarity=0.232 Sum_probs=30.9
Q ss_pred CCeEEEEcCCc-c-hhHHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 51 TDTVLEIGPGT-G-NMTVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 51 ~~~vLDiGcG~-G-~~~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
..+|-=||+|+ | .++..++..|..|+.+|++++.++.+.++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~ 48 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALEN 48 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence 45788899985 2 24455677799999999999998887654
No 407
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=78.20 E-value=2.6 Score=32.01 Aligned_cols=42 Identities=17% Similarity=0.312 Sum_probs=32.1
Q ss_pred CCCCCeEEEEcC--CcchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 48 IRPTDTVLEIGP--GTGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 48 ~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
..++++||-+|+ |.|..+..+++. |.+|++++ +++-.+.+++
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~ 225 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRK 225 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHH
Confidence 567899999993 467777777766 88999998 7766666643
No 408
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=77.85 E-value=3.2 Score=31.20 Aligned_cols=39 Identities=18% Similarity=0.199 Sum_probs=30.8
Q ss_pred CeEEEEcCCc--chhHHHHHhcCCeEEEEeCChhHHhhhhh
Q psy1134 52 DTVLEIGPGT--GNMTVKILEQAKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 52 ~~vLDiGcG~--G~~~~~l~~~~~~v~giD~s~~~i~~a~~ 90 (149)
++|-=||+|+ +.++..+++.|.+|+++|.+++.++.+++
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 47 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALE 47 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 5688888875 45566677779999999999999888754
No 409
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=77.23 E-value=3.6 Score=30.01 Aligned_cols=40 Identities=15% Similarity=0.175 Sum_probs=29.0
Q ss_pred CeEEEEcCCc--chhHHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 52 DTVLEIGPGT--GNMTVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 52 ~~vLDiGcG~--G~~~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
++|.=||+|+ +.++..+++.|.+|+.+|.+++.++.+.+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 46 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR 46 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence 4677788874 233444555689999999999988877654
No 410
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=77.03 E-value=2.2 Score=33.57 Aligned_cols=42 Identities=12% Similarity=0.252 Sum_probs=27.5
Q ss_pred CCCCeEEEEcCCc-ch-hHHHHHhcCCeEEEEeCChhHHhhhhh
Q psy1134 49 RPTDTVLEIGPGT-GN-MTVKILEQAKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 49 ~~~~~vLDiGcG~-G~-~~~~l~~~~~~v~giD~s~~~i~~a~~ 90 (149)
..+.++-=||+|. |. ++..|++.|.+|+++|.+++.++..++
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~ 52 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQN 52 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred ccCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHC
Confidence 3566666677653 22 233345558999999999999988765
No 411
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=76.99 E-value=1.6 Score=34.48 Aligned_cols=40 Identities=13% Similarity=0.242 Sum_probs=29.9
Q ss_pred CCeEEEEcCCcchhHHHHHhc----CCeEEEEeCChhHHhhhhhhh
Q psy1134 51 TDTVLEIGPGTGNMTVKILEQ----AKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 51 ~~~vLDiGcG~G~~~~~l~~~----~~~v~giD~s~~~i~~a~~~~ 92 (149)
..+|+=+|| |..+..+++. +..|+.+|.+++.++.+..++
T Consensus 3 ~M~iiI~G~--G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~ 46 (461)
T 4g65_A 3 AMKIIILGA--GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY 46 (461)
T ss_dssp CEEEEEECC--SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS
T ss_pred cCEEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc
Confidence 456666555 5677676664 678999999999999887654
No 412
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=76.74 E-value=2 Score=29.96 Aligned_cols=36 Identities=17% Similarity=0.147 Sum_probs=26.7
Q ss_pred eEEEEcCCcchhHHHHHhc----CCeEEEEeCChhHHhhhhh
Q psy1134 53 TVLEIGPGTGNMTVKILEQ----AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 53 ~vLDiGcG~G~~~~~l~~~----~~~v~giD~s~~~i~~a~~ 90 (149)
+|+=+|+ |.++..+++. +..|+.+|.+++.++.+.+
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~ 41 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAK 41 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence 3555564 7777776654 7899999999998887543
No 413
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=76.73 E-value=7.4 Score=27.76 Aligned_cols=43 Identities=12% Similarity=0.081 Sum_probs=32.9
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++-+++-++.+.+.+
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 55 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQV 55 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHH
Confidence 57889999998875 34456666999999999988777665443
No 414
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=76.33 E-value=5.5 Score=27.92 Aligned_cols=43 Identities=12% Similarity=0.200 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++-++.-.+.+.+..
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~ 49 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSM 49 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 46788988987764 44555666999999999988777655443
No 415
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=76.21 E-value=6.8 Score=28.40 Aligned_cols=43 Identities=9% Similarity=0.135 Sum_probs=32.5
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
+++++|=.|++.|+ ++..|++.|.+|+.++.+++-++.+.+.+
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~ 52 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEI 52 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 57889999988775 34456666999999999988777665544
No 416
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=75.73 E-value=6.9 Score=28.26 Aligned_cols=43 Identities=16% Similarity=0.157 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++-+++-++.+.+.+
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l 68 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGL 68 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 57789999988775 34456666999999999988777655443
No 417
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=75.67 E-value=6.1 Score=28.09 Aligned_cols=43 Identities=12% Similarity=0.101 Sum_probs=32.5
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++-+++-++.+.+.+
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 50 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEI 50 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 57789988987774 34456666999999999998877765543
No 418
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=74.71 E-value=6.7 Score=27.89 Aligned_cols=42 Identities=14% Similarity=0.153 Sum_probs=31.9
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++-+++-++.+.+.
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~ 51 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREE 51 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 57889999988775 3444566699999999998877765543
No 419
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=74.64 E-value=5 Score=30.38 Aligned_cols=41 Identities=24% Similarity=0.170 Sum_probs=33.6
Q ss_pred CCCCeEEEEcCC--cchhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 49 RPTDTVLEIGPG--TGNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 49 ~~~~~vLDiGcG--~G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
.++++||=+|++ .|..+..+++. |.+|+++- +++-.+.+++
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~ 206 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKS 206 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHH
Confidence 678899999983 78888888877 88999885 8887777765
No 420
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=74.54 E-value=4.6 Score=29.61 Aligned_cols=38 Identities=16% Similarity=0.171 Sum_probs=29.6
Q ss_pred CeEEEEcCCc-c-hhHHHHHhcCCeEEEEeCChhHHhhhh
Q psy1134 52 DTVLEIGPGT-G-NMTVKILEQAKKVIACEIDPSCKSYFP 89 (149)
Q Consensus 52 ~~vLDiGcG~-G-~~~~~l~~~~~~v~giD~s~~~i~~a~ 89 (149)
++|.=||+|. | .++..+++.+.+|+++|.+++.++.++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~ 55 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSK 55 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence 5788999985 3 355666777899999999998887653
No 421
>1yf3_A DNA adenine methylase; T4DAM, methyltransferase, transferase-DNA complex; HET: DNA SAH; 2.29A {Enterobacteria phage T4} SCOP: c.66.1.28 PDB: 1yfj_A* 1yfl_A* 1q0s_A* 1q0t_A*
Probab=74.39 E-value=2 Score=31.27 Aligned_cols=47 Identities=9% Similarity=0.158 Sum_probs=37.9
Q ss_pred HHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHhcCCeEEEEeCChhHHhhhh
Q psy1134 38 IIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILEQAKKVIACEIDPSCKSYFP 89 (149)
Q Consensus 38 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~i~~a~ 89 (149)
+..++.+.++. ..+.+|+-||+|.....+.. . ++..|++++.+..-+
T Consensus 14 l~~~i~~~lP~--~~~yvEpF~GggaV~~~~~~--~-~viNDin~~li~~~~ 60 (259)
T 1yf3_A 14 LLPELKSHFPK--YNRFVDLFCGGLSVSLNVNG--P-VLANDIQEPIIEMYK 60 (259)
T ss_dssp THHHHHHTCCC--CSEEEETTCTTCTTGGGSCS--S-EEEECSCHHHHHHHH
T ss_pred HHHHHHHhCcc--cCeEEEecCCccHHHHhccc--c-EEEecCChHHHHHHH
Confidence 46777777774 57999999999999876543 4 999999999998754
No 422
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=74.24 E-value=6.5 Score=27.94 Aligned_cols=43 Identities=16% Similarity=0.138 Sum_probs=31.8
Q ss_pred CCCeEEEEcC-Ccch---hHHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGP-GTGN---MTVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGc-G~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
+++++|=.|+ |.|+ ++..|++++.+|+.++.+++-++.+.+.+
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l 67 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQL 67 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHH
Confidence 5778999998 6655 44556667999999999988776655443
No 423
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=74.19 E-value=7.1 Score=28.09 Aligned_cols=43 Identities=9% Similarity=0.062 Sum_probs=31.9
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
.++++|=.|++.|+ ++..|++.|.+|+.++.+++-++.+.+.+
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l 48 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEI 48 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 46788999988775 34445666999999999988777665443
No 424
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=74.18 E-value=5 Score=31.87 Aligned_cols=42 Identities=14% Similarity=0.199 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCc-ch-hHHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 50 PTDTVLEIGPGT-GN-MTVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 50 ~~~~vLDiGcG~-G~-~~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
...+|.=||+|. |. ++..|++.|.+|+++|.+++.++.+++.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~ 50 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNG 50 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCC
Confidence 345788888883 33 4455666689999999999998887653
No 425
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=74.09 E-value=5.4 Score=31.46 Aligned_cols=40 Identities=23% Similarity=0.271 Sum_probs=31.1
Q ss_pred CCeEEEEcCCc--chhHHHHHhcCCeEEEEeCChhHHhhhhh
Q psy1134 51 TDTVLEIGPGT--GNMTVKILEQAKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 51 ~~~vLDiGcG~--G~~~~~l~~~~~~v~giD~s~~~i~~a~~ 90 (149)
-++|.=||+|+ +.++..+++.|..|+++|.+++.++.+++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~ 78 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKK 78 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence 45799999986 34555667678999999999998887654
No 426
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=74.01 E-value=4.3 Score=31.70 Aligned_cols=41 Identities=22% Similarity=0.441 Sum_probs=29.9
Q ss_pred CCCeEEEEcCCc-chhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 50 PTDTVLEIGPGT-GNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 50 ~~~~vLDiGcG~-G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
++.+|+=+|+|. |..+..++.. |.+|+++|.++.-++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 567899999973 4444333433 8899999999988777654
No 427
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=73.48 E-value=5.1 Score=30.33 Aligned_cols=41 Identities=17% Similarity=0.142 Sum_probs=29.1
Q ss_pred CCCeEEEEcCCcchhHHHHHh---cCCeEEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGPGTGNMTVKILE---QAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~---~~~~v~giD~s~~~i~~a~~~~ 92 (149)
+..+||=+||| ..+..+++ ....|+..|.+.+-++.+++..
T Consensus 15 ~~mkilvlGaG--~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~~~ 58 (365)
T 3abi_A 15 RHMKVLILGAG--NIGRAIAWDLKDEFDVYIGDVNNENLEKVKEFA 58 (365)
T ss_dssp -CCEEEEECCS--HHHHHHHHHHTTTSEEEEEESCHHHHHHHTTTS
T ss_pred CccEEEEECCC--HHHHHHHHHHhcCCCeEEEEcCHHHHHHHhccC
Confidence 34579999994 44444443 3678999999999988876553
No 428
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=73.19 E-value=6.5 Score=30.08 Aligned_cols=39 Identities=15% Similarity=0.164 Sum_probs=29.5
Q ss_pred CCCeEEEEcCCcchhHHHHHhc----CCeEEEEeCChhHHhhhhh
Q psy1134 50 PTDTVLEIGPGTGNMTVKILEQ----AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~----~~~v~giD~s~~~i~~a~~ 90 (149)
++++|+=+|+ |..+..+++. |.+|+++|.+++-++.+++
T Consensus 167 ~g~~V~ViG~--G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~ 209 (377)
T 2vhw_A 167 EPADVVVIGA--GTAGYNAARIANGMGATVTVLDINIDKLRQLDA 209 (377)
T ss_dssp CCCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECC--CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH
Confidence 5789999998 5555554443 7899999999987776654
No 429
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=72.95 E-value=10 Score=27.40 Aligned_cols=43 Identities=16% Similarity=0.121 Sum_probs=32.1
Q ss_pred CCCeEEEEcCCcchh---HHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGPGTGNM---TVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~---~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
+++.+|=.|++.|+- +..|++.|.+|+.++.+++-++.+.+.+
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l 72 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEI 72 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 577899999887753 3445666999999999988777665543
No 430
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=72.63 E-value=7.8 Score=27.98 Aligned_cols=42 Identities=14% Similarity=0.148 Sum_probs=31.7
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++-+++.++.+.+.
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~ 75 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADE 75 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 57889999988775 3445566699999999998777665544
No 431
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=72.60 E-value=7.4 Score=27.66 Aligned_cols=43 Identities=7% Similarity=0.109 Sum_probs=32.0
Q ss_pred CCCeEEEEcCCcchh---HHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGPGTGNM---TVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~---~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
+++++|=.|++.|+- +..|+++|.+|+.++.+++-.+.+.+.+
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 56 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAI 56 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 578899999887753 4445666999999999988776655443
No 432
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=72.22 E-value=6.6 Score=28.19 Aligned_cols=42 Identities=7% Similarity=0.097 Sum_probs=31.8
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++.+++-++.+.+.
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~ 73 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADE 73 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Confidence 57789999988774 3445566699999999998877765543
No 433
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=71.94 E-value=8.1 Score=27.80 Aligned_cols=43 Identities=19% Similarity=0.207 Sum_probs=31.9
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++.+++-++.+.+.+
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l 70 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEF 70 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 57889999987764 34445666999999999988777655443
No 434
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=71.92 E-value=8.6 Score=27.27 Aligned_cols=42 Identities=14% Similarity=0.150 Sum_probs=31.2
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++.+++-++...+.
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~ 51 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAE 51 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 57889999987764 3445666699999999998877665443
No 435
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=71.69 E-value=8.9 Score=27.10 Aligned_cols=42 Identities=14% Similarity=0.080 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
+++.+|=.|++.|+ ++..|+++|.+|+.++.+++-++.+.+.
T Consensus 11 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~ 55 (252)
T 3f1l_A 11 NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASH 55 (252)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 57889999988774 3444566699999999998877665443
No 436
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=71.68 E-value=7.4 Score=27.21 Aligned_cols=43 Identities=9% Similarity=0.056 Sum_probs=31.9
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++-++.-++.+.+.+
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 58 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQI 58 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHH
Confidence 57889999987764 34445666999999999988777665443
No 437
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=71.68 E-value=8.3 Score=27.03 Aligned_cols=43 Identities=16% Similarity=0.117 Sum_probs=31.9
Q ss_pred CCCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 49 RPTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
.++++||=.|++.|+ ++..|+++|.+|+.++-+++.++...+.
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~ 57 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNA 57 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 367889999988774 3444566699999999998877765443
No 438
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=71.67 E-value=8.4 Score=27.19 Aligned_cols=42 Identities=17% Similarity=0.264 Sum_probs=31.8
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++.+++-++.+.+.
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~ 49 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAAS 49 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 57889999988775 3445666699999999998877665443
No 439
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=71.56 E-value=8.3 Score=24.74 Aligned_cols=38 Identities=18% Similarity=0.232 Sum_probs=28.3
Q ss_pred CCeEEEEcCCcchhHHHHHhc----CCeEEEEeCChhHHhhhhh
Q psy1134 51 TDTVLEIGPGTGNMTVKILEQ----AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 51 ~~~vLDiGcG~G~~~~~l~~~----~~~v~giD~s~~~i~~a~~ 90 (149)
+++|+=+|| |..+..+++. +.+|+.+|.+++-.+...+
T Consensus 21 ~~~v~iiG~--G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~ 62 (144)
T 3oj0_A 21 GNKILLVGN--GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAE 62 (144)
T ss_dssp CCEEEEECC--SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHH
Confidence 789999997 5666666554 6679999999887765433
No 440
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=71.38 E-value=5.7 Score=30.76 Aligned_cols=41 Identities=17% Similarity=0.311 Sum_probs=29.3
Q ss_pred CCCeEEEEcCCc-chhHHHHHhc-CCeEEEEeCChhHHhhhhh
Q psy1134 50 PTDTVLEIGPGT-GNMTVKILEQ-AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 50 ~~~~vLDiGcG~-G~~~~~l~~~-~~~v~giD~s~~~i~~a~~ 90 (149)
++.+|+=+|+|. |..+...+.. |.+|+++|.++.-++.+++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 577899999973 3333333333 8899999999987776654
No 441
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=71.15 E-value=9 Score=27.60 Aligned_cols=39 Identities=28% Similarity=0.359 Sum_probs=30.8
Q ss_pred CeEEEEcCCcchh---HHHHHhcCCeEEEEeCChhHHhhhhh
Q psy1134 52 DTVLEIGPGTGNM---TVKILEQAKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 52 ~~vLDiGcG~G~~---~~~l~~~~~~v~giD~s~~~i~~a~~ 90 (149)
++||=-|++.|+- +..|++.|++|+.+|.+++.++.+.+
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~ 44 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK 44 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 5788889988864 55567779999999999987776544
No 442
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=71.13 E-value=7.5 Score=28.11 Aligned_cols=42 Identities=14% Similarity=0.307 Sum_probs=32.0
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
+++++|=.|++.|+ ++..|++.|.+|+.++.+++-++.+.+.
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~ 72 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATK 72 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 57889999988775 4455666799999999998877665443
No 443
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=70.99 E-value=6.4 Score=29.19 Aligned_cols=41 Identities=15% Similarity=0.210 Sum_probs=33.6
Q ss_pred CCCeEEEEcCCc--chhHHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 50 PTDTVLEIGPGT--GNMTVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 50 ~~~~vLDiGcG~--G~~~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
..++|-=||+|+ +.++..++ .|..|+++|.+++.++.+.+.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~ 53 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQ 53 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHH
Confidence 467899999995 44677788 899999999999999887665
No 444
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=70.77 E-value=9.4 Score=27.21 Aligned_cols=42 Identities=19% Similarity=0.158 Sum_probs=31.8
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
+++.+|=.|++.|+ ++..|+++|.+|+.++.+++-++.+.+.
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~ 51 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESA 51 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 57889999988875 3445566699999999998877665544
No 445
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=70.53 E-value=4.6 Score=29.14 Aligned_cols=39 Identities=21% Similarity=0.258 Sum_probs=31.8
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYF 88 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a 88 (149)
+|+.+|=-|.+.|+ .+..|++.|++|+.+|.+++-++.+
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~ 51 (242)
T 4b79_A 10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP 51 (242)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh
Confidence 68999999999987 4556677799999999998766543
No 446
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=70.39 E-value=10 Score=28.00 Aligned_cols=42 Identities=19% Similarity=0.205 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
.++++|=.|++.|+ ++..|+++|.+|++++-+++-++.+.+.
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~ 51 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALAT 51 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 57789999988775 3344555699999999998877665443
No 447
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=70.31 E-value=9.5 Score=27.52 Aligned_cols=41 Identities=10% Similarity=0.157 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~ 90 (149)
+++.+|=.|++.|+ ++..|+++|.+|+.++.+++-++...+
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~ 47 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEV 47 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHH
Confidence 57789999988774 445566669999999999887766543
No 448
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=69.91 E-value=10 Score=26.76 Aligned_cols=42 Identities=19% Similarity=0.260 Sum_probs=32.3
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
+++++|=.|++.|+ ++..|++++.+|+.++-+++-++.+.+.
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~ 52 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGE 52 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 57789999998774 4555666699999999998877765543
No 449
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=69.73 E-value=12 Score=26.26 Aligned_cols=42 Identities=10% Similarity=0.018 Sum_probs=30.3
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++-+++-++.+.+.
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~ 50 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDE 50 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 46789999987764 3444556689999999998776655443
No 450
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=69.69 E-value=13 Score=26.75 Aligned_cols=32 Identities=19% Similarity=0.387 Sum_probs=25.6
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCC
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEID 81 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s 81 (149)
+++.+|=.|++.|+ ++..|++.|.+|+.+|.+
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~ 44 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDIC 44 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEecc
Confidence 57889999998875 344566669999999987
No 451
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=69.67 E-value=8.7 Score=29.18 Aligned_cols=39 Identities=13% Similarity=0.277 Sum_probs=28.6
Q ss_pred CCCeEEEEcCCcchhHHHHHhc----CCeEEEEeCChhHHhhhhh
Q psy1134 50 PTDTVLEIGPGTGNMTVKILEQ----AKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~----~~~v~giD~s~~~i~~a~~ 90 (149)
++++|+=+|+ |..+..+++. |.+|+++|.+++-++.+++
T Consensus 165 ~~~~V~ViGa--G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~ 207 (369)
T 2eez_A 165 APASVVILGG--GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDD 207 (369)
T ss_dssp CCCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECC--CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence 5689999998 4555444433 8899999999987766543
No 452
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=69.62 E-value=8.5 Score=27.20 Aligned_cols=42 Identities=19% Similarity=0.216 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++-+++-.+...+.
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~ 52 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDY 52 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 57889999988774 4445666699999999998877665443
No 453
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=69.47 E-value=10 Score=26.92 Aligned_cols=41 Identities=17% Similarity=0.251 Sum_probs=30.0
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~ 90 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++.+++-++.+.+
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 55 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKA 55 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 57789999987764 344456669999999999876665443
No 454
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=69.44 E-value=19 Score=25.79 Aligned_cols=41 Identities=20% Similarity=0.293 Sum_probs=29.6
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~ 90 (149)
+++.+|=.|++.|+ ++..|+++|.+|+.++-+++.++...+
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~ 71 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTAT 71 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 57789999987664 333455568999999999876665443
No 455
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=69.40 E-value=14 Score=26.58 Aligned_cols=42 Identities=10% Similarity=0.102 Sum_probs=29.6
Q ss_pred CCCCeEEEEcCCcch---hHHHHHhcCCeEEEEeC-ChhHHhhhhh
Q psy1134 49 RPTDTVLEIGPGTGN---MTVKILEQAKKVIACEI-DPSCKSYFPS 90 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~-s~~~i~~a~~ 90 (149)
..++.+|=.|++.|+ ++..|+++|.+|+.++. +++.++...+
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~ 72 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIA 72 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHH
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH
Confidence 357789999988775 44556666999999995 6655554433
No 456
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=69.38 E-value=13 Score=26.63 Aligned_cols=32 Identities=22% Similarity=0.485 Sum_probs=25.0
Q ss_pred CCCCeEEEEcCCcch---hHHHHHhcCCeEEEEeC
Q psy1134 49 RPTDTVLEIGPGTGN---MTVKILEQAKKVIACEI 80 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~ 80 (149)
.+++.+|=.|++.|+ ++..|+++|.+|+.+|.
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEec
Confidence 367889999998875 34456666999999997
No 457
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=69.05 E-value=7.2 Score=29.16 Aligned_cols=45 Identities=13% Similarity=0.168 Sum_probs=32.2
Q ss_pred HHcCCCCCCeEEEEcC--CcchhHHHHHhc--CCeEEEEeCChhHHhhhh
Q psy1134 44 DKGAIRPTDTVLEIGP--GTGNMTVKILEQ--AKKVIACEIDPSCKSYFP 89 (149)
Q Consensus 44 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~--~~~v~giD~s~~~i~~a~ 89 (149)
+.....++++||=.|+ |.|..+..+++. +..|++++ +++-.+.++
T Consensus 136 ~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~ 184 (349)
T 4a27_A 136 EVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK 184 (349)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH
Confidence 4456678999999998 457777777776 46899988 555445543
No 458
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=68.77 E-value=9.3 Score=30.60 Aligned_cols=40 Identities=25% Similarity=0.205 Sum_probs=29.8
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhc----CCeEEEEeCChhHHhhhh
Q psy1134 48 IRPTDTVLEIGPGTGNMTVKILEQ----AKKVIACEIDPSCKSYFP 89 (149)
Q Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~----~~~v~giD~s~~~i~~a~ 89 (149)
...+++|+=+|+ |..+..+++. |.+|+++|.++.-.+.++
T Consensus 271 ~l~GktV~IiG~--G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~ 314 (494)
T 3ce6_A 271 LIGGKKVLICGY--GDVGKGCAEAMKGQGARVSVTEIDPINALQAM 314 (494)
T ss_dssp CCTTCEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CCCcCEEEEEcc--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 357899999987 4555554443 789999999998766654
No 459
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=68.74 E-value=10 Score=26.76 Aligned_cols=42 Identities=7% Similarity=0.064 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
+++.+|=.|++.|+ ++..|+++|.+|+.++-+++-++.+.+.
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~ 50 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDE 50 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 57789999988775 3444566699999999998877765543
No 460
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=68.71 E-value=10 Score=24.48 Aligned_cols=30 Identities=17% Similarity=0.252 Sum_probs=22.0
Q ss_pred CCeEEEEcCCcchhHHHHHhc----CCeEEEEeCCh
Q psy1134 51 TDTVLEIGPGTGNMTVKILEQ----AKKVIACEIDP 82 (149)
Q Consensus 51 ~~~vLDiGcG~G~~~~~l~~~----~~~v~giD~s~ 82 (149)
.++|+=+|| |..+..+++. +..|+.+|.++
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCC
Confidence 346777765 7777766554 78999999973
No 461
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=68.54 E-value=11 Score=26.92 Aligned_cols=32 Identities=16% Similarity=0.346 Sum_probs=25.2
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCC
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEID 81 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s 81 (149)
+++++|=.|++.|+ ++..|+++|.+|+.+|.+
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 46 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLC 46 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecc
Confidence 57889999988774 445566669999999987
No 462
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=68.27 E-value=3.7 Score=32.43 Aligned_cols=39 Identities=15% Similarity=0.179 Sum_probs=26.5
Q ss_pred CeEEEEcCCc-ch-hHHHHHhcCCeEEEEeCChhHHhhhhh
Q psy1134 52 DTVLEIGPGT-GN-MTVKILEQAKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 52 ~~vLDiGcG~-G~-~~~~l~~~~~~v~giD~s~~~i~~a~~ 90 (149)
-+|-=||+|. |. ++..|++.|.+|+++|.+++.++..++
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~ 49 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQ 49 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTT
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhc
Confidence 3566666652 22 233345558999999999998887765
No 463
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=68.24 E-value=10 Score=26.29 Aligned_cols=38 Identities=16% Similarity=0.221 Sum_probs=26.3
Q ss_pred CCCeEEEEcCCcchhHHHHH----hcCCeEEEEeCChhHHhhh
Q psy1134 50 PTDTVLEIGPGTGNMTVKIL----EQAKKVIACEIDPSCKSYF 88 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~~~~l~----~~~~~v~giD~s~~~i~~a 88 (149)
++++||=.|+. |.++..++ +++.+|++++-++.-.+..
T Consensus 20 ~~~~ilVtGat-G~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~ 61 (236)
T 3e8x_A 20 QGMRVLVVGAN-GKVARYLLSELKNKGHEPVAMVRNEEQGPEL 61 (236)
T ss_dssp -CCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHH
T ss_pred CCCeEEEECCC-ChHHHHHHHHHHhCCCeEEEEECChHHHHHH
Confidence 57889988864 44444444 4489999999998766554
No 464
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=67.76 E-value=8 Score=27.99 Aligned_cols=42 Identities=17% Similarity=0.171 Sum_probs=30.0
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
+++++|=.|++.|+ ++..|++.|.+|+.++.+++-++.+.+.
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~ 76 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGE 76 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 57889999987765 3444566699999999998877665443
No 465
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=67.75 E-value=11 Score=27.00 Aligned_cols=41 Identities=15% Similarity=0.132 Sum_probs=28.7
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeC-ChhHHhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEI-DPSCKSYFPS 90 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~-s~~~i~~a~~ 90 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++- +++..+...+
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~ 72 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKN 72 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH
Confidence 57889999988775 34455666999999988 5555544433
No 466
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=67.70 E-value=13 Score=26.97 Aligned_cols=33 Identities=12% Similarity=0.284 Sum_probs=25.9
Q ss_pred CCCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCC
Q psy1134 49 RPTDTVLEIGPGTGN---MTVKILEQAKKVIACEID 81 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s 81 (149)
.+++.+|=.|++.|+ ++..|++.|.+|+.+|.+
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~ 61 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVC 61 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecc
Confidence 357889999998875 344566669999999987
No 467
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=67.66 E-value=15 Score=25.89 Aligned_cols=41 Identities=15% Similarity=0.137 Sum_probs=29.4
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~ 90 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++-+++-++.+.+
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 51 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLT 51 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 57789988987664 334455568999999999876665433
No 468
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=67.51 E-value=15 Score=25.99 Aligned_cols=42 Identities=10% Similarity=0.143 Sum_probs=30.3
Q ss_pred CCCeEEEEcCCcchh---HHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 50 PTDTVLEIGPGTGNM---TVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~---~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
+++++|=.|++.|+- +..|+++|.+|+.++.+++-++.+.+.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~ 50 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEAS 50 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 577899999877753 334555689999999998776655433
No 469
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=67.46 E-value=7.7 Score=30.03 Aligned_cols=40 Identities=25% Similarity=0.382 Sum_probs=27.9
Q ss_pred CCCeEEEEcCCc-chhHHHHHhc-CCeEEEEeCChhHHhhhh
Q psy1134 50 PTDTVLEIGPGT-GNMTVKILEQ-AKKVIACEIDPSCKSYFP 89 (149)
Q Consensus 50 ~~~~vLDiGcG~-G~~~~~l~~~-~~~v~giD~s~~~i~~a~ 89 (149)
++.+|+=+|+|. |..+..++.. |.+|+++|.++.-.+.++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~ 212 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ 212 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 478999999863 3333333333 889999999998766653
No 470
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=67.40 E-value=12 Score=26.85 Aligned_cols=43 Identities=16% Similarity=0.179 Sum_probs=32.1
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++.+++-++.+.+.+
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l 55 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQEL 55 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 57789999987774 34456666999999999988776655443
No 471
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=67.35 E-value=12 Score=26.12 Aligned_cols=41 Identities=17% Similarity=0.168 Sum_probs=30.6
Q ss_pred CCeEEEEcCCcchh---HHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 51 TDTVLEIGPGTGNM---TVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 51 ~~~vLDiGcG~G~~---~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
++++|=.|++.|+- +..|+++|.+|+.++-+++-++.+.+.
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~ 46 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELL 46 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 56788889887753 344566699999999998877765544
No 472
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=67.33 E-value=8.6 Score=27.65 Aligned_cols=42 Identities=10% Similarity=0.164 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
+++.+|=.|++.|+ ++..|+++|.+|+.++.+++-++.+.+.
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~ 71 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAA 71 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 57789988987775 3445666699999999998877665443
No 473
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=67.18 E-value=12 Score=27.00 Aligned_cols=41 Identities=10% Similarity=0.208 Sum_probs=31.2
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~ 90 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++.+++-++...+
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~ 69 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVAN 69 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 57889999988775 344556669999999999877666544
No 474
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=67.13 E-value=6.9 Score=28.26 Aligned_cols=42 Identities=17% Similarity=0.215 Sum_probs=31.2
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++.+++-.+.+.+.
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~ 76 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQR 76 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 57889999988775 3445566699999999988766655444
No 475
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=66.99 E-value=14 Score=26.24 Aligned_cols=43 Identities=9% Similarity=0.077 Sum_probs=32.3
Q ss_pred CCCeEEEEcCCc--ch---hHHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGPGT--GN---MTVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGcG~--G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
+++.+|=-|++. |+ .+..|++.|++|+.++.+++..+.+.+..
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~ 52 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLL 52 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 688999999643 42 46667888999999999988777665543
No 476
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=66.98 E-value=8 Score=28.87 Aligned_cols=54 Identities=9% Similarity=0.190 Sum_probs=35.6
Q ss_pred HHHHHHHHcCCCCCCeEEEEcCCcchhHHHHHh-cCCeEEEEeCChhHHhhhhhhh
Q psy1134 38 IIQSIVDKGAIRPTDTVLEIGPGTGNMTVKILE-QAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 38 ~~~~~~~~l~~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~giD~s~~~i~~a~~~~ 92 (149)
++++.+...-......||++|||.=.....+.. .+..|+=+| .|..++..++.+
T Consensus 90 ~~d~~v~~~~~~g~~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL 144 (310)
T 2uyo_A 90 FFDTYFNNAVIDGIRQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTL 144 (310)
T ss_dssp HHHHHHHHHHHTTCCEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHH
Confidence 444444433112345799999998877666652 256898999 588888876655
No 477
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=66.77 E-value=12 Score=27.58 Aligned_cols=33 Identities=18% Similarity=0.329 Sum_probs=25.4
Q ss_pred CCCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCC
Q psy1134 49 RPTDTVLEIGPGTGN---MTVKILEQAKKVIACEID 81 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s 81 (149)
.+++.+|=.|++.|+ ++..|++.|.+|+.+|.+
T Consensus 25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~ 60 (322)
T 3qlj_A 25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIG 60 (322)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCc
Confidence 357889999988774 444566669999999987
No 478
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=66.71 E-value=13 Score=26.20 Aligned_cols=40 Identities=28% Similarity=0.404 Sum_probs=29.4
Q ss_pred CCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhh
Q psy1134 51 TDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 51 ~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~ 90 (149)
++++|=.|++.|+ ++..|+++|.+|+.+|.+++-.+...+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 44 (247)
T 3dii_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK 44 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 4678888988774 344556669999999999877766543
No 479
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=66.36 E-value=17 Score=26.23 Aligned_cols=42 Identities=17% Similarity=0.105 Sum_probs=31.0
Q ss_pred CCCCeEEEEcCCcchh---HHHHHhcCCeEEEEeCChhHHhhhhh
Q psy1134 49 RPTDTVLEIGPGTGNM---TVKILEQAKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~~---~~~l~~~~~~v~giD~s~~~i~~a~~ 90 (149)
.+++++|=.|++.|+- +..|+++|.+|+.++-++.-.+.+.+
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~ 58 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAAR 58 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 4678899999887653 33455558999999999887776544
No 480
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=66.25 E-value=18 Score=25.93 Aligned_cols=41 Identities=12% Similarity=0.158 Sum_probs=29.4
Q ss_pred CCCeEEEEcCCcchh---HHHHHhcCCeEEEEeCChhHHhhhhh
Q psy1134 50 PTDTVLEIGPGTGNM---TVKILEQAKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~---~~~l~~~~~~v~giD~s~~~i~~a~~ 90 (149)
+++++|=.|++.|+- +..|+++|.+|++++-+++-++.+.+
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 64 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLK 64 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 567899999876643 33455568999999999876655433
No 481
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=66.06 E-value=15 Score=26.21 Aligned_cols=32 Identities=28% Similarity=0.416 Sum_probs=25.0
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCC
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEID 81 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s 81 (149)
+++++|=.|++.|+ ++..|+++|.+|+.+|.+
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEccc
Confidence 57889999998775 344456669999999987
No 482
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=65.62 E-value=11 Score=27.17 Aligned_cols=42 Identities=10% Similarity=-0.009 Sum_probs=30.2
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
+++++|=.|++.|+ ++..|+++|.+|++++-++.-.+.+.+.
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~ 55 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEK 55 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 57789999988774 3444566699999999998766655443
No 483
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=65.50 E-value=20 Score=25.07 Aligned_cols=40 Identities=13% Similarity=0.159 Sum_probs=27.6
Q ss_pred CCCeEEEEcCCcchh---HHHHHhcCCeEEEEeCChhHHhhhh
Q psy1134 50 PTDTVLEIGPGTGNM---TVKILEQAKKVIACEIDPSCKSYFP 89 (149)
Q Consensus 50 ~~~~vLDiGcG~G~~---~~~l~~~~~~v~giD~s~~~i~~a~ 89 (149)
+++++|=.|++.|.- +..|++++.+|++++-++.-.+...
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 54 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAV 54 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 567899888766542 3334555899999999887655443
No 484
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=65.42 E-value=14 Score=26.08 Aligned_cols=40 Identities=5% Similarity=0.066 Sum_probs=28.7
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFP 89 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~ 89 (149)
+++++|=.|++.|+ ++..|+++|.+|++++-+++-++.+.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~ 48 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAA 48 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 46788988987664 33345556899999999987665543
No 485
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=65.38 E-value=9.7 Score=27.27 Aligned_cols=41 Identities=7% Similarity=0.100 Sum_probs=30.9
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~ 90 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++.+++-++.+.+
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~ 53 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAA 53 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 57889999988775 445566679999999998876665543
No 486
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=65.30 E-value=5.8 Score=30.02 Aligned_cols=33 Identities=27% Similarity=0.320 Sum_probs=25.9
Q ss_pred CCeEEEEcCCcchhHHH--HHhc--CCeEEEEeCChh
Q psy1134 51 TDTVLEIGPGTGNMTVK--ILEQ--AKKVIACEIDPS 83 (149)
Q Consensus 51 ~~~vLDiGcG~G~~~~~--l~~~--~~~v~giD~s~~ 83 (149)
|++|+=||.|.|-++.. |++. +.+|+.||.++.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 78999999999877665 5554 358999998764
No 487
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=65.18 E-value=15 Score=26.76 Aligned_cols=39 Identities=13% Similarity=0.104 Sum_probs=28.6
Q ss_pred CCCeEEEEcCCc--ch---hHHHHHhcCCeEEEEeCChhHHhhh
Q psy1134 50 PTDTVLEIGPGT--GN---MTVKILEQAKKVIACEIDPSCKSYF 88 (149)
Q Consensus 50 ~~~~vLDiGcG~--G~---~~~~l~~~~~~v~giD~s~~~i~~a 88 (149)
+++++|=.|++. |+ ++..|++.|.+|+.++.+++..+.+
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~ 72 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRV 72 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Confidence 577899999854 43 5566677799999999997654444
No 488
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=64.95 E-value=15 Score=26.64 Aligned_cols=40 Identities=10% Similarity=0.012 Sum_probs=29.0
Q ss_pred CCCCeEEEEcCCcc-----hhHHHHHhcCCeEEEEeCChhHHhhh
Q psy1134 49 RPTDTVLEIGPGTG-----NMTVKILEQAKKVIACEIDPSCKSYF 88 (149)
Q Consensus 49 ~~~~~vLDiGcG~G-----~~~~~l~~~~~~v~giD~s~~~i~~a 88 (149)
.+++++|=.|++.| .++..|++.|.+|+.++.++...+.+
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~ 73 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRV 73 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 36788999998743 34556777799999999887654443
No 489
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=64.91 E-value=11 Score=26.90 Aligned_cols=41 Identities=12% Similarity=0.111 Sum_probs=30.4
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~ 90 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++.+++-++.+.+
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~ 52 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIK 52 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 57789999987764 344456669999999999877665543
No 490
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=64.91 E-value=17 Score=25.93 Aligned_cols=41 Identities=15% Similarity=0.162 Sum_probs=29.4
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~ 90 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++-+++.++.+.+
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~ 63 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLE 63 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 57789999987664 333455558999999999876665433
No 491
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=64.65 E-value=9.9 Score=27.78 Aligned_cols=43 Identities=16% Similarity=0.154 Sum_probs=31.9
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSLY 92 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~~ 92 (149)
+++++|=.|++.|+ ++..|++.|.+|+.++.+++-++.+.+.+
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l 85 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAEL 85 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 57789999988775 44456666999999999987766654443
No 492
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=64.41 E-value=15 Score=25.55 Aligned_cols=40 Identities=10% Similarity=0.152 Sum_probs=27.9
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFP 89 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~ 89 (149)
+++++|=.|++.|. ++..|+++|.+|++++-+++-++.+.
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 52 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAA 52 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 56789988877653 23334555899999999887665543
No 493
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=64.31 E-value=18 Score=25.89 Aligned_cols=31 Identities=19% Similarity=0.395 Sum_probs=24.5
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeC
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEI 80 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~ 80 (149)
+++.+|=.|++.|+ ++..|+++|.+|+.+|.
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r 43 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDI 43 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEec
Confidence 57889999988875 34456666999999998
No 494
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=64.07 E-value=17 Score=25.14 Aligned_cols=40 Identities=5% Similarity=0.007 Sum_probs=28.6
Q ss_pred CCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhh
Q psy1134 51 TDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 51 ~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~ 90 (149)
++++|=.|++.|. ++..|+++|.+|+.++-+++-++.+.+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 44 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAH 44 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 5678888987664 344455568999999999876665543
No 495
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=63.79 E-value=12 Score=26.68 Aligned_cols=42 Identities=12% Similarity=0.053 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++-+++-++.+.+.
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~ 63 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRA 63 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 57889999988775 3445566699999999998877665443
No 496
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=63.77 E-value=16 Score=25.88 Aligned_cols=40 Identities=15% Similarity=0.130 Sum_probs=29.1
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFP 89 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~ 89 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++-+++-.+.+.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~ 48 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMA 48 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 56789988987764 33445566999999999987665543
No 497
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=63.71 E-value=16 Score=25.80 Aligned_cols=41 Identities=5% Similarity=0.040 Sum_probs=29.1
Q ss_pred CCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHHhhhhh
Q psy1134 50 PTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 50 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i~~a~~ 90 (149)
+++++|=.|++.|+ ++..|+++|.+|+.++-+++-++.+.+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 49 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAAS 49 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 46789988987664 333455568999999999876655433
No 498
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=63.44 E-value=11 Score=27.65 Aligned_cols=41 Identities=12% Similarity=0.113 Sum_probs=28.3
Q ss_pred CCeEEEEcCCc--chhHHHHHhcCCeEEEEeCChhHHhhhhhh
Q psy1134 51 TDTVLEIGPGT--GNMTVKILEQAKKVIACEIDPSCKSYFPSL 91 (149)
Q Consensus 51 ~~~vLDiGcG~--G~~~~~l~~~~~~v~giD~s~~~i~~a~~~ 91 (149)
..+|.=||+|. +.++..|++.+.+|+++|.+++.++.+.+.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~ 49 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence 35788887763 223334455588999999999888876543
No 499
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=63.41 E-value=8.6 Score=30.59 Aligned_cols=39 Identities=21% Similarity=0.276 Sum_probs=29.9
Q ss_pred CeEEEEcCCc--chhHHHHHhcCCeEEEEeCChhHHhhhhh
Q psy1134 52 DTVLEIGPGT--GNMTVKILEQAKKVIACEIDPSCKSYFPS 90 (149)
Q Consensus 52 ~~vLDiGcG~--G~~~~~l~~~~~~v~giD~s~~~i~~a~~ 90 (149)
++|-=||+|+ +.++..+++.|..|+.+|.+++.++.+.+
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~ 46 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAID 46 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence 3577788875 44555667778999999999999988754
No 500
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=63.35 E-value=9.9 Score=27.27 Aligned_cols=37 Identities=14% Similarity=0.262 Sum_probs=27.0
Q ss_pred CCCCeEEEEcCCcch---hHHHHHhcCCeEEEEeCChhHH
Q psy1134 49 RPTDTVLEIGPGTGN---MTVKILEQAKKVIACEIDPSCK 85 (149)
Q Consensus 49 ~~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~i 85 (149)
.++++||=.|++.|+ ++..|+++|.+|+.++.++...
T Consensus 12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~ 51 (269)
T 3vtz_A 12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD 51 (269)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc
Confidence 468899999988774 4455666699999999876543
Done!