Query psy11346
Match_columns 219
No_of_seqs 183 out of 1224
Neff 7.0
Searched_HMMs 46136
Date Fri Aug 16 16:03:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11346.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11346hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1307|consensus 100.0 1.4E-36 3E-41 274.1 9.2 162 4-166 38-206 (588)
2 TIGR00927 2A1904 K+-dependent 100.0 5.7E-32 1.2E-36 261.1 15.1 162 4-166 438-606 (1096)
3 PLN03151 cation/calcium exchan 100.0 8E-27 1.7E-31 223.2 20.2 151 16-166 140-291 (650)
4 TIGR00367 K+-dependent Na+/Ca+ 99.9 4.3E-26 9.3E-31 202.1 17.3 145 19-166 2-146 (307)
5 PRK10734 putative calcium/sodi 99.9 7.7E-26 1.7E-30 201.9 16.9 138 26-166 10-147 (325)
6 COG0530 ECM27 Ca2+/Na+ antipor 99.9 4.1E-24 8.8E-29 190.2 17.5 148 16-166 7-154 (320)
7 PRK10734 putative calcium/sodi 99.9 2.1E-22 4.6E-27 179.8 15.6 135 27-164 182-318 (325)
8 COG0530 ECM27 Ca2+/Na+ antipor 99.9 5.6E-22 1.2E-26 176.5 16.5 138 23-163 179-318 (320)
9 TIGR00845 caca sodium/calcium 99.9 5E-23 1.1E-27 201.3 9.0 167 14-181 73-270 (928)
10 TIGR00367 K+-dependent Na+/Ca+ 99.9 2.2E-21 4.7E-26 172.0 14.6 134 22-158 173-307 (307)
11 TIGR00378 cax calcium/proton e 99.9 3.9E-21 8.5E-26 173.2 14.3 129 33-167 31-176 (349)
12 PF01699 Na_Ca_ex: Sodium/calc 99.9 1.1E-21 2.5E-26 153.3 9.0 131 30-161 2-139 (140)
13 TIGR00846 caca2 calcium/proton 99.8 4.9E-20 1.1E-24 166.9 15.2 134 26-161 228-363 (365)
14 TIGR00846 caca2 calcium/proton 99.8 3.9E-20 8.5E-25 167.6 11.2 136 25-166 41-192 (365)
15 KOG2399|consensus 99.8 7.7E-20 1.7E-24 173.3 7.0 148 14-164 102-251 (605)
16 KOG1397|consensus 99.8 3.6E-18 7.8E-23 152.5 13.0 175 25-209 99-294 (441)
17 TIGR00927 2A1904 K+-dependent 99.8 1.7E-18 3.8E-23 168.3 10.8 137 28-164 942-1084(1096)
18 TIGR00378 cax calcium/proton e 99.8 1E-17 2.2E-22 151.0 14.7 133 26-160 212-346 (349)
19 KOG1307|consensus 99.7 6.3E-18 1.4E-22 153.6 8.8 129 35-163 440-575 (588)
20 TIGR00845 caca sodium/calcium 99.7 2.6E-16 5.7E-21 154.4 15.1 130 35-164 770-919 (928)
21 PLN03151 cation/calcium exchan 99.5 6.8E-13 1.5E-17 127.8 16.3 140 26-165 491-639 (650)
22 PRK10599 calcium/sodium:proton 99.4 2.2E-12 4.7E-17 116.5 14.7 133 27-162 230-364 (366)
23 KOG2399|consensus 99.4 1.8E-12 3.9E-17 123.4 14.7 153 7-161 437-596 (605)
24 COG0387 ChaA Ca2+/H+ antiporte 99.4 1.5E-11 3.3E-16 110.3 14.5 130 34-167 49-191 (368)
25 COG0387 ChaA Ca2+/H+ antiporte 99.3 6.6E-11 1.4E-15 106.3 14.5 146 15-162 217-364 (368)
26 KOG1397|consensus 99.2 7.7E-11 1.7E-15 105.9 9.2 135 23-159 294-430 (441)
27 KOG1306|consensus 99.0 8.7E-11 1.9E-15 108.1 0.8 147 17-164 29-201 (596)
28 KOG1306|consensus 98.9 1E-09 2.2E-14 101.2 4.6 149 9-163 421-589 (596)
29 PRK10599 calcium/sodium:proton 97.9 0.00018 3.8E-09 65.5 12.1 129 34-167 53-194 (366)
30 PRK14585 pgaD putative PGA bio 77.8 9.5 0.00021 30.1 6.2 94 121-214 16-124 (137)
31 PF12794 MscS_TM: Mechanosensi 60.2 1.3E+02 0.0028 27.1 11.2 22 79-100 147-168 (340)
32 COG5393 Predicted membrane pro 46.1 1.4E+02 0.003 23.2 8.3 60 92-167 45-105 (131)
33 PF13038 DUF3899: Domain of un 44.2 19 0.00041 25.9 2.2 11 195-205 62-72 (92)
34 COG2245 Predicted membrane pro 39.8 88 0.0019 25.8 5.5 46 20-65 102-147 (182)
35 PF08507 COPI_assoc: COPI asso 35.4 1.4E+02 0.0031 23.0 6.0 24 141-164 85-108 (136)
36 PF06195 DUF996: Protein of un 35.0 1.5E+02 0.0032 23.3 6.1 46 20-65 77-122 (139)
37 PF13593 DUF4137: SBF-like CPA 34.6 3.3E+02 0.0072 24.2 12.1 74 52-125 91-164 (313)
38 COG4818 Predicted membrane pro 32.7 2.1E+02 0.0046 21.4 8.6 20 88-107 4-23 (105)
39 PF04346 EutH: Ethanolamine ut 31.5 90 0.0019 28.6 4.8 37 33-69 255-291 (354)
40 PRK10921 twin-arginine protein 31.1 1.1E+02 0.0023 26.7 5.1 19 145-163 216-234 (258)
41 PF01708 Gemini_mov: Geminivir 31.1 79 0.0017 23.2 3.6 15 149-163 46-60 (91)
42 PRK14584 hmsS hemin storage sy 30.6 1.6E+02 0.0035 23.7 5.6 18 197-214 116-133 (153)
43 PRK15086 ethanolamine utilizat 30.3 86 0.0019 28.9 4.5 35 34-68 258-292 (372)
44 TIGR00911 2A0308 L-type amino 29.7 3.1E+02 0.0067 25.6 8.4 28 151-179 459-486 (501)
45 PF04277 OAD_gamma: Oxaloaceta 28.8 1.5E+02 0.0032 20.4 4.7 14 148-161 13-26 (79)
46 COG0385 Predicted Na+-dependen 26.9 3.5E+02 0.0076 24.5 7.7 81 51-133 94-175 (319)
47 COG4736 CcoQ Cbb3-type cytochr 26.9 1.1E+02 0.0023 20.8 3.4 20 145-164 12-31 (60)
48 PF15102 TMEM154: TMEM154 prot 25.7 49 0.0011 26.5 1.8 18 188-205 117-134 (146)
49 KOG3142|consensus 24.8 2.6E+02 0.0056 23.3 6.0 50 110-159 110-159 (187)
50 KOG3814|consensus 23.7 4.8E+02 0.01 24.6 8.0 68 96-163 165-245 (531)
51 PF01102 Glycophorin_A: Glycop 22.7 84 0.0018 24.3 2.6 13 147-159 75-87 (122)
52 PRK14750 kdpF potassium-transp 22.2 1.6E+02 0.0035 16.9 3.0 20 144-163 4-23 (29)
53 PF05434 Tmemb_9: TMEM9; Inte 22.1 1.3E+02 0.0029 24.1 3.7 17 146-162 62-78 (149)
54 PRK01637 hypothetical protein; 21.4 5.4E+02 0.012 22.3 7.9 21 155-175 250-270 (286)
55 PF07136 DUF1385: Protein of u 20.3 3.4E+02 0.0073 23.5 6.1 37 143-179 79-115 (236)
56 cd01776 Rin1_RA Ubiquitin doma 20.1 48 0.001 24.0 0.7 19 200-218 51-69 (87)
No 1
>KOG1307|consensus
Probab=100.00 E-value=1.4e-36 Score=274.10 Aligned_cols=162 Identities=44% Similarity=0.831 Sum_probs=156.7
Q ss_pred ccccCCccch-------hHHHHHHHHHHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHH
Q psy11346 4 IMINFPFGFV-------GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIG 76 (219)
Q Consensus 4 ~~~~~~~~~~-------~~~~~~~l~~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a 76 (219)
+..+||+|.+ |++++|+.+++|+|++|+++|++||||+++.|+++++||++++|+|++|.|+|+||++++++.
T Consensus 38 ~~~~fP~DiFs~e~rr~G~VvlHv~g~iYmFvALAIVCDefFVPSL~vItEkL~iSdDVAGATFMAAGgSAPElFTSvIG 117 (588)
T KOG1307|consen 38 ALGEFPPDIFSLEQRRQGAVVLHVIGLIYMFVALAIVCDEFFVPSLDVITEKLGISDDVAGATFMAAGGSAPELFTSVIG 117 (588)
T ss_pred ccccCCCccccHHHhhcCcEEeehhhHHHHHHHHHHHhcccccccHHHHHHHhcCcccccchhhhhccCCchHHhhhhee
Confidence 5679999999 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCCceeehhhhhhhHHHHhhHhHHHHHHhcCceeEecchhHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHH
Q psy11346 77 TFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYY 156 (219)
Q Consensus 77 ~~~g~~~iaig~iiGS~lfn~llv~gl~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g~is~~~gi~Ll~~Y~ 156 (219)
+.--+.|+++|+++||++||+++|+|.|.++ +++..++.+|+++||..+|.++++.|++++.|..+.|||+++|+..|+
T Consensus 118 VFIt~~dVGiGTIVGSAvFNIL~Vig~C~LF-Srqvl~LtWWPLfRD~sfY~lsl~~Li~Ff~D~~I~WwEaL~L~~~Yi 196 (588)
T KOG1307|consen 118 VFITQGDVGIGTIVGSAVFNILCVIGVCGLF-SRQVLNLTWWPLFRDVSFYTLSLIMLIYFFLDELIMWWEALALLLMYI 196 (588)
T ss_pred EEEecCCcceeeeeehhhhhHHHHHHHHHhh-cccccccccchhhhhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 878999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q psy11346 157 FYIIEKAKIV 166 (219)
Q Consensus 157 ~yl~~~~~~~ 166 (219)
.|++++.+..
T Consensus 197 ~Yv~~MKfN~ 206 (588)
T KOG1307|consen 197 SYVVFMKFNG 206 (588)
T ss_pred HHheeeehhh
Confidence 9999987654
No 2
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=99.98 E-value=5.7e-32 Score=261.13 Aligned_cols=162 Identities=40% Similarity=0.772 Sum_probs=150.9
Q ss_pred ccccCCccch-------hHHHHHHHHHHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHH
Q psy11346 4 IMINFPFGFV-------GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIG 76 (219)
Q Consensus 4 ~~~~~~~~~~-------~~~~~~~l~~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a 76 (219)
++++||+|++ +++++++++++|+|++++++|++||+++++.|++++++|+.++|+|++|+|||+||+++++++
T Consensus 438 p~~efP~d~fti~~R~~g~VVL~l~~liy~Fv~LaIv~dDyFVPSLe~IAekLgLSE~VAGaTLLAfGTSAPELfTSLiA 517 (1096)
T TIGR00927 438 PKAEYPPDLFSVEERRQGWVVLHIFGMMYVFVALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIG 517 (1096)
T ss_pred chhhCCcccccccccccceeHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhCCcHhhhheeeeeeecCcHHHHHHHHH
Confidence 6789999997 688999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCCceeehhhhhhhHHHHhhHhHHHHHHhcCceeEecchhHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHH
Q psy11346 77 TFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYY 156 (219)
Q Consensus 77 ~~~g~~~iaig~iiGS~lfn~llv~gl~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g~is~~~gi~Ll~~Y~ 156 (219)
++.++.++++||++||++||+++++|+|+++ .+..++++++.+.||..+++++..++..++.++++++++|++|+++|+
T Consensus 518 v~~g~sDIGVGNIVGSnIFNILLVLGl~aLi-s~~~l~Ld~~~L~RDllFyILAv~lLilf~lDG~Itr~EgIILLlLYi 596 (1096)
T TIGR00927 518 VFISHSNVGIGTIVGSAVFNILFVIGTCALF-SREILNLTWWPLFRDVSFYILDLMMLILFFLDSLIAWWESLLLLLAYA 596 (1096)
T ss_pred HHcCCCcceehhhHhHHHHHHHHHHhhheee-ccccccccccceehhHHHHHHHHHHHHHHHhCCeEcHHHHHHHHHHHH
Confidence 9999999999999999999999999999988 544567778889999999999988877778899999999999999999
Q ss_pred HHHHHHHHHH
Q psy11346 157 FYIIEKAKIV 166 (219)
Q Consensus 157 ~yl~~~~~~~ 166 (219)
+|+++++...
T Consensus 597 iYVvvm~~n~ 606 (1096)
T TIGR00927 597 LYVFTMKWNK 606 (1096)
T ss_pred HHHHHHHHhH
Confidence 9999887654
No 3
>PLN03151 cation/calcium exchanger; Provisional
Probab=99.95 E-value=8e-27 Score=223.24 Aligned_cols=151 Identities=24% Similarity=0.370 Sum_probs=137.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhh-CCCceeehhhhhhhH
Q psy11346 16 IIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFI-TEGDVGTGTVVGSGV 94 (219)
Q Consensus 16 ~~~~~l~~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~-g~~~iaig~iiGS~l 94 (219)
+++..++++++|+.+...+++||+|+++.+++++++||+++|+|++|+|||+||+++++.++.. ++.++++|+++||++
T Consensus 140 ~~~l~~~l~~lF~~L~~ta~dyF~p~l~~Is~~L~lse~vAGvTlLAfGNsaPDlf~si~a~~~~~~~~l~ig~ilGs~l 219 (650)
T PLN03151 140 YAVLGVWLVALFYLLGNTAADYFCCSLEKLSKLLRLPPTVAGVTLLPLGNGAPDVFASIAAFVGKDAGEVGLNSVLGGAV 219 (650)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCCHHHHHHHHHHHhCCcHHHHHHHHHHHcCCCCceeeehhhhHHH
Confidence 3445689999999999999999999999999999999999999999999999999999998764 788999999999999
Q ss_pred HHHhhHhHHHHHHhcCceeEecchhHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHH
Q psy11346 95 FNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYIIEKAKIV 166 (219)
Q Consensus 95 fn~llv~gl~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g~is~~~gi~Ll~~Y~~yl~~~~~~~ 166 (219)
||++++.|++.++...+|++++++.+.||..+++++..++..+..+|++++++|++++.+|++|+++....+
T Consensus 220 f~~~vV~G~v~l~~~~~pf~v~~~~f~RD~~F~lla~~~l~~~l~~g~v~~~eai~ll~lY~~Yv~vv~~~~ 291 (650)
T PLN03151 220 FVTCVVVGIVSLCVADKEVQIDKRCFIRDLCFFLFTLVSLLVILMVGKVTVGGAIAFVSIYVVYAFLVAANE 291 (650)
T ss_pred HHHHHHHHHHHHhccCCceeecchhHHHhHHHHHHHHHHHHHHHHcCeEhHHHHHHHHHHHHHHHHHHHhhH
Confidence 999999999998833468999999999999999999888877788999999999999999999998776433
No 4
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein. This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.
Probab=99.94 E-value=4.3e-26 Score=202.07 Aligned_cols=145 Identities=30% Similarity=0.459 Sum_probs=134.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHh
Q psy11346 19 PTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNML 98 (219)
Q Consensus 19 ~~l~~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~l 98 (219)
|++..++++..+...++++|+++++.+++++|+|+.+.|+|++|+|||+||+++++.++++|++++++||++|||+||++
T Consensus 2 ~~~~~~~~~~~~~~~~a~~lv~~~~~ia~~lgl~~~v~G~tlla~gtslPEl~~si~a~~~g~~~la~g~ilGS~l~n~l 81 (307)
T TIGR00367 2 ILIGYLILGLILLIYGADLFVKSSVRIARKLGISPLIIGVTVVAIGTSLPELFTSLIASLIGQPDIGVGNVIGSNIFNIL 81 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccHHHHHHHHHHhcCCCCeehhhhhhHHHHHHH
Confidence 56777888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhHHHHHHhcCceeEecchhHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHH
Q psy11346 99 AVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYIIEKAKIV 166 (219)
Q Consensus 99 lv~gl~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g~is~~~gi~Ll~~Y~~yl~~~~~~~ 166 (219)
+++|++.++ ++++.+++.+.||..+++++...+..+..+++++|++|++|++.|+.|+.++.+.+
T Consensus 82 ~i~g~~~l~---~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~g~i~~~~gi~ll~~Yv~yl~~~~~~~ 146 (307)
T TIGR00367 82 LILGLSAIF---SPIIVDTDWLRRDFSFYLLVSILLLFFGLDGPISRLDGVVLLFLYVVYLLFLVKVE 146 (307)
T ss_pred HHHHHHHhh---cceeechHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 57888888899999999888777777778999999999999999999999988654
No 5
>PRK10734 putative calcium/sodium:proton antiporter; Provisional
Probab=99.94 E-value=7.7e-26 Score=201.86 Aligned_cols=138 Identities=20% Similarity=0.373 Sum_probs=121.7
Q ss_pred HHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHHHH
Q psy11346 26 IFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCI 105 (219)
Q Consensus 26 lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl~~ 105 (219)
+-..+..+++++|+++.+.+++++|+|+.+.|+|++|+|||+||+++++.|+++|++|+++||++|||+||+++++|++.
T Consensus 10 ~gl~~l~~ga~~lv~~~~~ia~~lgis~~viG~tiva~gTSlPEl~vsv~A~~~g~~~ia~GnilGSni~ni~lilg~~~ 89 (325)
T PRK10734 10 IGLLLLVYGADRLVFAASILCRTFGIPPLIIGMTVVGIGTSLPEIIVSVAASLHGQRDLAVGTALGSNITNILLILGLAA 89 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcchhHHHHHHHHHHcCCCcchhhhhhhHHHHHHHHHHHHHH
Confidence 33456667999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCceeEecchhHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHH
Q psy11346 106 LLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYIIEKAKIV 166 (219)
Q Consensus 106 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g~is~~~gi~Ll~~Y~~yl~~~~~~~ 166 (219)
++ +|++++++.+.++..+++.+.+++..+..+++++|++|++++.+|+.|+.+++|.+
T Consensus 90 l~---~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~l~~~~g~~ll~~~~~yl~~~~~~~ 147 (325)
T PRK10734 90 LI---RPFTVHSDVLRRELPLMLLVSVLAGSVLYDGQLSRSDGIFLLLLAVLWLLFIVKIA 147 (325)
T ss_pred Hh---CCcccChHHHHHHHHHHHHHHHHHHHHHHCCcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99 66777766677787766655554444567899999999999999999999988755
No 6
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]
Probab=99.92 E-value=4.1e-24 Score=190.20 Aligned_cols=148 Identities=24% Similarity=0.437 Sum_probs=137.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHH
Q psy11346 16 IIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVF 95 (219)
Q Consensus 16 ~~~~~l~~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lf 95 (219)
..+..+..+.++..+.+.++|+|+++++.+++++|+|+.+.|+|++|+|||+||+.+++.++.+|++|+++||++|||++
T Consensus 7 ~~~~~~~~~i~~l~llv~~ad~lv~~a~~Is~~~gi~~~~iG~tiva~gTslPE~~vs~~a~l~g~~~iavGnvlGSni~ 86 (320)
T COG0530 7 MLLLLILLLIAGLILLVKGADLLVDAASAISRRFGISELIIGLTIVAFGTSLPELAVSLVAALSGNPDIAVGNVLGSNIF 86 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHccChHHHHHHHHHHcCCCCeeeehhhhHHHH
Confidence 34555677778888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhHhHHHHHHhcCceeEecchhHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHH
Q psy11346 96 NMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYIIEKAKIV 166 (219)
Q Consensus 96 n~llv~gl~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g~is~~~gi~Ll~~Y~~yl~~~~~~~ 166 (219)
|+++++|+++++ ++.+.++..+.||..+++++...+..+..+++++|++|+.++.+|+.|+.+.+|..
T Consensus 87 ni~li~gl~ali---~~~~~~~~~~~r~~~f~ll~~~~~~~~~~~~~~~~~~gi~ll~l~~~yl~~~~~~~ 154 (320)
T COG0530 87 NILLILGLAALI---APLKVDSDVLRREIPFLLLATLILLLVLLDGHLSRLDGIVLLLLYVLYLYYLLKLS 154 (320)
T ss_pred HHHHHHHHHHHH---hhhHhhhhHHHHhhHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999 67777777899999999999998888999999999999999999999999988643
No 7
>PRK10734 putative calcium/sodium:proton antiporter; Provisional
Probab=99.89 E-value=2.1e-22 Score=179.77 Aligned_cols=135 Identities=18% Similarity=0.296 Sum_probs=114.3
Q ss_pred HHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHHHHH
Q psy11346 27 FVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCIL 106 (219)
Q Consensus 27 f~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl~~~ 106 (219)
...+...++++++++.+.+++.+|+||.+.|+|++|+|||+||+++++.++++|+.|+++||++|||+||+++++|++++
T Consensus 182 g~~~l~~gs~~lv~~~~~ia~~lgis~~~iG~tiva~gtslPE~~~sv~a~~~g~~~~avgniiGsnifni~~~lg~~~l 261 (325)
T PRK10734 182 ALIIMPMATRMVIDNATVLANYFAISELTIGLTVIAIGTSLPELATAIAGARKGENDIAVGNIIGSNIFNIVIVLGLPAL 261 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHhccHHHHHHHHHHHHcCCCchHHHHHHhHHHHHHHHHHHHHHh
Confidence 33455578999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCceeEecchhHHHHHHHHHHHHHHH-HHHH-hCCcccHHHHHHHHHHHHHHHHHHHH
Q psy11346 107 LCRSQKIRLDYWPLTRDSIIYMVAVLIL-AFSL-QDGKVMWYEALSMVFFYYFYIIEKAK 164 (219)
Q Consensus 107 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l-~~~~-~~g~is~~~gi~Ll~~Y~~yl~~~~~ 164 (219)
+ .+..+......+|...+...++++ .... .+++++|++|++|+.+|+.|+...++
T Consensus 262 ~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~G~~Ll~~Y~~y~~~l~~ 318 (325)
T PRK10734 262 I---SPGEINPLAFSRDYWVMLLVSVIFALLCWRRKRRIGRGAGALLLGGFIVWLAMLYW 318 (325)
T ss_pred h---ccccccchhHHHHHHHHHHHHHHHHHHHHHcCCccChHHHHHHHHHHHHHHHHHHh
Confidence 9 555555556677776554443333 2233 56789999999999999999887664
No 8
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]
Probab=99.89 E-value=5.6e-22 Score=176.51 Aligned_cols=138 Identities=25% Similarity=0.361 Sum_probs=124.0
Q ss_pred HHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhH
Q psy11346 23 TGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPA 102 (219)
Q Consensus 23 ~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~g 102 (219)
.+.....+...++++++++...+|+.+|+||.+.|+|+.|+|||+||+++++.++|+|+.|+++||++|||+||+++++|
T Consensus 179 ~~~~~~~~l~~g~~llv~~~~~iA~~~gi~e~~igltivaigTSlPElv~si~a~rkg~~~iavGnviGSni~n~~~~lG 258 (320)
T COG0530 179 VLVIGLILLVVGSELLVDGAVEIAEIFGISELIIGLTIVAIGTSLPELVVSIVAARKGEDDIAVGNVIGSNIFNILIVLG 258 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHcccHHHHHHHHHHHcCCCCeEEeeecchHHHHHHHHHh
Confidence 33344556677899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCceeEecchhHHHHHHHHHHHHHHHHHH--HhCCcccHHHHHHHHHHHHHHHHHHH
Q psy11346 103 LCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFS--LQDGKVMWYEALSMVFFYYFYIIEKA 163 (219)
Q Consensus 103 l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~--~~~g~is~~~gi~Ll~~Y~~yl~~~~ 163 (219)
+..++ +|.+..+..+.+|...++..++++... ..+++++|++|..+++.|+.|+.+..
T Consensus 259 i~~~~---~~~~~~~~~~~~~~~vmi~~~l~l~l~~~~~~~~i~r~~g~~ll~~Y~~~~~~~~ 318 (320)
T COG0530 259 ISALI---GPITVEPSALLVDAPVLILVTLLLLLFLARRRRRIGRKEGLLLLGLYIVYVALLI 318 (320)
T ss_pred HHHhc---cccccCchhHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHh
Confidence 99999 777777778899999888887766555 57889999999999999999988754
No 9
>TIGR00845 caca sodium/calcium exchanger 1. This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family
Probab=99.88 E-value=5e-23 Score=201.27 Aligned_cols=167 Identities=23% Similarity=0.377 Sum_probs=131.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhcccHHHHHHHhC------------------CChhhhHHHHHHhcCChhHHHHHHH
Q psy11346 14 GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLE------------------LSNDVAGATLMASGTSSPELFINLI 75 (219)
Q Consensus 14 ~~~~~~~l~~~~lf~~l~i~~s~~~v~~~~~ia~~lg------------------is~~v~G~tlla~gts~PEl~~si~ 75 (219)
..-++|+++++|||+++.++|++|| +++|.|+++.+ ||++++|+|++|+|||+||++++++
T Consensus 73 ~r~~~~~~~l~y~F~~~~i~ad~f~-~sie~i~~~~~~v~~~~~~ge~~~~~~ri~~~tvag~t~~A~gssaPe~~~s~~ 151 (928)
T TIGR00845 73 ARATVYFVAMVYMFLGVSIIADRFM-ASIEVITSQEKEITIKKPNGETTVTTVRIWNETVSNLTLMALGSSAPEILLSVI 151 (928)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhccceeeeecCCCcceeeEeeeCCcccccceeeeccCCchHHHHHHH
Confidence 4667899999999999999999876 99999999644 7999999999999999999999999
Q ss_pred HHhhCC---CceeehhhhhhhHHHHhhHhHHHHHHhc-CceeEecc-hhHHHHHHHHHHHHHHHH---HHHhCCcccHHH
Q psy11346 76 GTFITE---GDVGTGTVVGSGVFNMLAVPALCILLCR-SQKIRLDY-WPLTRDSIIYMVAVLILA---FSLQDGKVMWYE 147 (219)
Q Consensus 76 a~~~g~---~~iaig~iiGS~lfn~llv~gl~~~~~~-~~~~~~~~-~~~~~d~~~~~~~~~~l~---~~~~~g~is~~~ 147 (219)
++..++ .++++|+++||++||+++|.|+|.++.. |..-++++ +.+.....+-+.+.+++. .+..+|.+..||
T Consensus 152 ~~~~~~~~~g~lg~gtivGsa~Fn~~vi~~~~~~~~p~g~~~~i~~l~Vf~vTa~wSifAYiWl~lil~v~sp~vv~vwE 231 (928)
T TIGR00845 152 EVCGHNFEAGDLGPSTIVGSAAFNMFIIIAICVYVIPDGETRKIKHLRVFFVTAAWSVFAYVWLYLILAVFSPGVVEVWE 231 (928)
T ss_pred HHhccCCccccccccceehhHHHHHHhhheeEEEeccCccceeeeeeeEEEEeeeHHHHHHHHHHhhheeeCCcHHHHHH
Confidence 987654 5999999999999999999999998743 22222222 122222233333334433 345799999999
Q ss_pred HHHHHHHHHHHHHHHHHH-----HHhhhchhhhhhhhcc
Q psy11346 148 ALSMVFFYYFYIIEKAKI-----VVTSGYKIYRDEVQFY 181 (219)
Q Consensus 148 gi~Ll~~Y~~yl~~~~~~-----~~~~~~~~~r~~~~~~ 181 (219)
|++.+++|.++++..+-. .+||++||+|..+++.
T Consensus 232 ~~lTl~ffp~~V~~A~~aD~~l~~~k~~~k~yr~~k~~~ 270 (928)
T TIGR00845 232 GLLTFFFFPLCVVFAWVADRRLLFYKYVYKRYRAGKQRG 270 (928)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhhhhhccccccccccCc
Confidence 999999999999887643 3678899999887753
No 10
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein. This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.
Probab=99.87 E-value=2.2e-21 Score=172.00 Aligned_cols=134 Identities=24% Similarity=0.331 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHh
Q psy11346 22 ITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVP 101 (219)
Q Consensus 22 ~~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~ 101 (219)
..+.+..++...++++++++++.+++.+|+|+.+.|+|++|+|||+||+++++.++++|+.|+++||++|||+||.++++
T Consensus 173 ~~~~~~~~~i~~~s~~~v~~~~~i~~~lgi~~~~~g~tl~a~~ts~PE~~~~i~a~~~g~~~~avg~~iGs~i~~~~~~~ 252 (307)
T TIGR00367 173 VLLIIGLTGLVVGSRLLVDGAVQIAEIFGISEKIIGLTLLAIGTSLPELVVSVAAARKGLGDIAVGNVIGSNIFNILVGL 252 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccHHHHHHHHHHHcCCCchHHHHHhhhHHHHHHHHH
Confidence 34445556667789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCceeEecchhHHHHHHHHHHHHHHH-HHHHhCCcccHHHHHHHHHHHHHH
Q psy11346 102 ALCILLCRSQKIRLDYWPLTRDSIIYMVAVLIL-AFSLQDGKVMWYEALSMVFFYYFY 158 (219)
Q Consensus 102 gl~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l-~~~~~~g~is~~~gi~Ll~~Y~~y 158 (219)
|++.++ .+++++++.+.||..+++...+++ .....+++++|++|++|+.+|+.|
T Consensus 253 g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~l~~~Y~~y 307 (307)
T TIGR00367 253 GVPSLF---YPIPVEPLAYSLDAPVMVIVTLVLMLVFKTSMKLGRWEGFLLLALYIAY 307 (307)
T ss_pred HHHHHh---cccccchhHHHHHHHHHHHHHHHHHHHHHhcCeehHHHHHHHHHHHHhC
Confidence 999999 567777778889988776655444 334568999999999999999886
No 11
>TIGR00378 cax calcium/proton exchanger (cax).
Probab=99.86 E-value=3.9e-21 Score=173.16 Aligned_cols=129 Identities=16% Similarity=0.218 Sum_probs=106.7
Q ss_pred HhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHHHHHHhcCce
Q psy11346 33 VCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQK 112 (219)
Q Consensus 33 ~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl~~~~~~~~~ 112 (219)
-.+++++++.+.+++++| +.+.|+++.++|| +||+++++.|+++|++|+++||++|||++|+++++|+|+++ ++
T Consensus 31 pla~~l~~~~~~lA~~~g--~~vggl~~~~~gt-~pEL~vsi~A~~~g~~~i~~gnivGS~i~NllLilGls~li---gg 104 (349)
T TIGR00378 31 PLAAIMGNATEELADKAG--PTIGGLLNATFGN-AVELIVSIIALKEGLVRIVQASLTGSLLGNLLLVLGLCFFF---GG 104 (349)
T ss_pred HHHHHHHHHHHHHHHHcC--chHHHHHHHhhcc-HHHHHHHHHHHHcCChhhhHHHHHHHHHHhHHHHHHHHHHH---hc
Confidence 357899999999999999 8999999999999 99999999999999999999999999999999999999998 45
Q ss_pred eEecchhHHHH-----HHHHHHHHHHHHHH--H---h----CC---cccHHHHHHHHHHHHHHHHHHHHHHH
Q psy11346 113 IRLDYWPLTRD-----SIIYMVAVLILAFS--L---Q----DG---KVMWYEALSMVFFYYFYIIEKAKIVV 167 (219)
Q Consensus 113 ~~~~~~~~~~d-----~~~~~~~~~~l~~~--~---~----~g---~is~~~gi~Ll~~Y~~yl~~~~~~~~ 167 (219)
.+.+++.+.++ ..++.++.+.+..+ . . ++ .++|++|++++++|+.|+.++.|+++
T Consensus 105 l~~~~q~~~~~~a~~~~~ll~la~~~l~lp~~~~~~~~~~~~~~~~~ls~~~aiill~lY~~~L~~~l~~h~ 176 (349)
T TIGR00378 105 LNYKQQTFNQTAARTNSSLLAIACVALLIPAARATLSHGKEDGKILNLSRGTSIVIIIVYVLFLYFQLGTHH 176 (349)
T ss_pred cccceeecCHHHHHHHHHHHHHHHHHHHhhhHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 55444445444 55555554433332 1 1 33 68999999999999999999998773
No 12
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins. This domain covers the integral membrane regions of these proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells []. Ca2+ is moved into or out of the cytosol depending on Na+ concentration []. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3 []. ; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3V5U_A 3V5S_A.
Probab=99.86 E-value=1.1e-21 Score=153.26 Aligned_cols=131 Identities=28% Similarity=0.563 Sum_probs=109.7
Q ss_pred HHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHHHHHHhc
Q psy11346 30 LATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCR 109 (219)
Q Consensus 30 l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl~~~~~~ 109 (219)
+...+++++++++|.+++++|+|+.+.|++++|++||+||+++++.++++|++++++|+++||+++|++++.|++.++ +
T Consensus 2 ~i~~~a~~l~~~~~~i~~~~~i~~~~~g~~lla~~~slpe~~~~~~~~~~g~~~la~~~~~Gs~~~~~~l~~gl~~l~-~ 80 (140)
T PF01699_consen 2 LIIVAAEFLVESVEIIAERLGISESFLGLTLLALATSLPELIVAISAARKGNPDLAIGNIIGSNIFNITLIVGLILLF-G 80 (140)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTB-HCCHHHCCHHCCCCHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHTHHHHHHHH-S
T ss_pred EehHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcCHHHHHHHHHHhhccccchhhhcccchHHHHHHHHHHHHHHh-c
Confidence 345689999999999999999999999999999999999999999999999999999999999999999999999999 3
Q ss_pred Cce---eEecchhHHHHHHHHHHHHHHHHHHHh----CCcccHHHHHHHHHHHHHHHHH
Q psy11346 110 SQK---IRLDYWPLTRDSIIYMVAVLILAFSLQ----DGKVMWYEALSMVFFYYFYIIE 161 (219)
Q Consensus 110 ~~~---~~~~~~~~~~d~~~~~~~~~~l~~~~~----~g~is~~~gi~Ll~~Y~~yl~~ 161 (219)
+.. .+.++....++..+++.+..++..+.. ++++++++|++++.+|+.|+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~y~~y~~~ 139 (140)
T PF01699_consen 81 PIKLGSQTIDWSSFTRDFSFLLLAILLLILFFLAFIRDGRISRFEGLVLLILYILYLVF 139 (140)
T ss_dssp -B---------HHHHHHHHHHHHHHHHHHHCCT---HCT-BSHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccchHHHHHHHHHHHHHHHHHHHHHHHcCCeEhHHHHHHHHHHHHHHHhc
Confidence 221 245667788888888877666665544 9999999999999999999876
No 13
>TIGR00846 caca2 calcium/proton exchanger. This model is generated from the calcium ion/proton exchangers of the CacA family.
Probab=99.84 E-value=4.9e-20 Score=166.94 Aligned_cols=134 Identities=19% Similarity=0.300 Sum_probs=112.1
Q ss_pred HHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHHHH
Q psy11346 26 IFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCI 105 (219)
Q Consensus 26 lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl~~ 105 (219)
....+...++++++++++.+++++|+|+.+.|+|++|+|||+||+.+++.++++|+.|+++||++|||+||+++++|++.
T Consensus 228 ~~~~~l~~~a~~lv~~~~~ia~~~gis~~~iGl~lvai~tslpE~~~si~aa~~g~~~lavg~~iGSni~n~l~vl~~~~ 307 (365)
T TIGR00846 228 GATIVVALLAEYLVDTIESAVESWGLSVAFIGVILAPIVGNAAEHAGAVIAAFKNKLDIALGVALGSALQIALFVVPVVV 307 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcccHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 34456667899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhc--CceeEecchhHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHH
Q psy11346 106 LLCR--SQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYIIE 161 (219)
Q Consensus 106 ~~~~--~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g~is~~~gi~Ll~~Y~~yl~~ 161 (219)
++.. +.+++...+ ..|...+.++.+++.....+|+++|+||++++.+|+.|+..
T Consensus 308 li~~~~~~~~~l~~~--~~~~~~l~~s~~~~~~~~~~~~~~~~eG~~ll~~Y~~~~~~ 363 (365)
T TIGR00846 308 LVAWMLGIPMDLNFG--APETVALALSVFLTTITLQDGRSNYLEGAVLLALYIIIAML 363 (365)
T ss_pred HHHHhcCCceeccCc--HHHHHHHHHHHHHHHHHHcCCcCcHHHHHHHHHHHHHHHHH
Confidence 8821 344444432 23445555555555555679999999999999999999763
No 14
>TIGR00846 caca2 calcium/proton exchanger. This model is generated from the calcium ion/proton exchangers of the CacA family.
Probab=99.82 E-value=3.9e-20 Score=167.57 Aligned_cols=136 Identities=18% Similarity=0.200 Sum_probs=104.1
Q ss_pred HHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHHH
Q psy11346 25 YIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALC 104 (219)
Q Consensus 25 ~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl~ 104 (219)
.+-..+.+.++++++++.+.+++++|.+ + |.++++++||+||+++++.|+.+|++++++||++|||++|+++++|+|
T Consensus 41 ~~~~~~li~~a~~lv~~a~~lA~~~G~~--v-G~ll~a~~ts~pEL~vsi~A~~~g~~~la~gnivGS~i~NilLIlGl~ 117 (365)
T TIGR00846 41 LLNLLGIIPLAERVSFATEQLAHRLGPT--L-GGLLNATFGNAVELIISLMALGEGKVEVVRASLLGSILSNLLLVLGLS 117 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCc--h-hhHHHHHHhHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344456678999999999999999977 4 555669999999999999999999999999999999999999999999
Q ss_pred HHHhcCceeEec-chhHHHHHH-----HHHHHHHHHHH--H---HhCC-----cccHHHHHHHHHHHHHHHHHHHHHH
Q psy11346 105 ILLCRSQKIRLD-YWPLTRDSI-----IYMVAVLILAF--S---LQDG-----KVMWYEALSMVFFYYFYIIEKAKIV 166 (219)
Q Consensus 105 ~~~~~~~~~~~~-~~~~~~d~~-----~~~~~~~~l~~--~---~~~g-----~is~~~gi~Ll~~Y~~yl~~~~~~~ 166 (219)
+++ ++.+.. ++.+.++.. ++.++.+.+.. . ..++ .++|++|++++++|+.|+.++++.+
T Consensus 118 ~l~---~~~~~~~~~~~~~~~~~~~~~ll~~~~~~l~lp~~~~~~~~~~~~~~~ls~~~giill~ly~~yl~~~~~~~ 192 (365)
T TIGR00846 118 LFL---GGIKNIREQRFNRGAAQVNSALLLLAILSLVLPLALPAGKPGQDSILGLSRGIAIVMLILYGAFLVFQLVTH 192 (365)
T ss_pred HHH---hccCccceeeccHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999 444432 222333332 23333222211 1 1344 5899999999999999999988755
No 15
>KOG2399|consensus
Probab=99.79 E-value=7.7e-20 Score=173.26 Aligned_cols=148 Identities=30% Similarity=0.512 Sum_probs=135.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhC-CCceeehhhhhh
Q psy11346 14 GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFIT-EGDVGTGTVVGS 92 (219)
Q Consensus 14 ~~~~~~~l~~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g-~~~iaig~iiGS 92 (219)
..+.+.+++++++|..+...+++||+++++.+++.+++||+++|+|++|+||++||++.++.+++.. .+|+++++++|+
T Consensus 102 ~~i~~~~~~~~~lf~~l~~~a~~yFspsL~~is~~L~l~esvAGVTlLa~GNgapDvf~siasv~~~~~~~~~~~~~lg~ 181 (605)
T KOG2399|consen 102 ILIILLVLWLLFLFYLLGITADDYFSPSLSSISSLLRLSESVAGVTLLAFGNGAPDVFASIASVRGTPKGDLALNDLLGG 181 (605)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCceeeEEEeeecCCCchHHhhhheeecCCCcccHHHHHhcc
Confidence 3456778899999999999999999999999999999999999999999999999999999998743 447999999999
Q ss_pred hHHHHhhHhHHHHHHhcCceeEecchhHHHHHHHHHHHHHHHHHHHhCC-cccHHHHHHHHHHHHHHHHHHHH
Q psy11346 93 GVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDG-KVMWYEALSMVFFYYFYIIEKAK 164 (219)
Q Consensus 93 ~lfn~llv~gl~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g-~is~~~gi~Ll~~Y~~yl~~~~~ 164 (219)
.+|..+++.|+..+. +|++++.....||..+++.++..+.++...+ +++.|.+...+..|..|+....-
T Consensus 182 alFVt~~V~G~i~~t---~pFki~~~~~iRDi~Fll~al~~l~~~~~~~~~v~~~~~l~fl~~y~~Yv~~vi~ 251 (605)
T KOG2399|consen 182 ALFVTTVVVGLIILT---KPFKINANSFIRDILFLLLALLFLAFILLRGNKVEIWMALTFLGIYVVYVVTVIV 251 (605)
T ss_pred ceeEEeeEeeeeeee---cceeeccchhHHHHHHHHHHHHHHHHHHhcCCceeHHhHHHHhHHHHHHHHHHHH
Confidence 999999999999988 8899999999999999999998887766555 99999999999999999987663
No 16
>KOG1397|consensus
Probab=99.77 E-value=3.6e-18 Score=152.48 Aligned_cols=175 Identities=17% Similarity=0.246 Sum_probs=125.1
Q ss_pred HHHHHHHHHh-hhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHH
Q psy11346 25 YIFVFLATVC-DAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPAL 103 (219)
Q Consensus 25 ~lf~~l~i~~-s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl 103 (219)
|.+..+.++. ++++..+.|+++...| ++++|+++..||| +-|+++++.|.++|+.+++.++++||.+.|+++++|+
T Consensus 99 F~lsll~iiPLA~~l~~ateqls~~tg--~tvGgllNAtfGn-aiElii~ilALk~g~~riVq~SlLGSILsnlLLvlG~ 175 (441)
T KOG1397|consen 99 FLLSLLGIIPLAERLGFATEQLSAYTG--PTVGGLLNATFGN-AIELIIYILALKNGKVRIVQGSLLGSILSNLLLVLGL 175 (441)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHhhcC--CcHHHHHhhhhcc-HHHHHHHHHHhhcCceEEEehhhHHHHHHHHHHHhhH
Confidence 3333444443 6789999999999888 9999999999999 6699999999999999999999999999999999999
Q ss_pred HHHHhcC---ceeEecchhHHHHHHHHHHHHHHHH--HHH---hC---------C---cccHHHHHHHHHHHHHHHHHHH
Q psy11346 104 CILLCRS---QKIRLDYWPLTRDSIIYMVAVLILA--FSL---QD---------G---KVMWYEALSMVFFYYFYIIEKA 163 (219)
Q Consensus 104 ~~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~l~--~~~---~~---------g---~is~~~gi~Ll~~Y~~yl~~~~ 163 (219)
|++. ++ +..+.++........+++++.+..+ .++ +. + .+||..+++|+..|++|++|++
T Consensus 176 s~~~-Ggi~rk~Q~Fn~~~A~v~s~lLl~a~l~~l~P~~l~~~~~~~~~~~~~~~~~l~lSr~~SivmliaYi~~L~FqL 254 (441)
T KOG1397|consen 176 SLFC-GGIRRKDQRFNIKSAGVNSALLLLAVLGILLPTVLHYTYGGEVHDCSSGGAILPLSRGCSIVMLIAYIAYLWFQL 254 (441)
T ss_pred HHhh-cccccceeecccchhhHHHHHHHHHHHHHHHHHHHHHhcCccccccCCccceeeehhccHHHHHHHHHHHHHHhh
Confidence 9988 43 2334454444444555554444333 222 11 1 4789999999999999999999
Q ss_pred HHHHhhhchhhhhhhhcccccCCCCCCCCCchhhhccccceeeeee
Q psy11346 164 KIVVTSGYKIYRDEVQFYNQEDIGKSNPTNKAKEMEYMGRWSTLAF 209 (219)
Q Consensus 164 ~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 209 (219)
|+++ -.|+-+ + ++++|.+..+..+.++|.|.+++|++++|
T Consensus 255 ~t~~-h~~~~~----~-~~ee~~~~d~~~s~~~e~p~is~~ss~~~ 294 (441)
T KOG1397|consen 255 KTAR-HIWQFP----T-PDEEETEQDDEVSNEDEAPNISRWSSIIW 294 (441)
T ss_pred hccc-ccCCCC----C-CChhcccccccccccCCCCcchHHHHHHH
Confidence 8731 111111 1 11222122222233789999999999887
No 17
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=99.76 E-value=1.7e-18 Score=168.30 Aligned_cols=137 Identities=19% Similarity=0.303 Sum_probs=111.1
Q ss_pred HHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHHHHHH
Q psy11346 28 VFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCILL 107 (219)
Q Consensus 28 ~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl~~~~ 107 (219)
++.+.+.+..++..+..++..+|||++++|+|++|+|||+||++++++++++|..++|++|++|||+||+++.+|+.+++
T Consensus 942 IiwIsi~SyilV~~at~IG~vlGIse~VmGlTfLA~GTSIPDlisSvivArkG~gdMAVan~iGSNIFnIllgLGlPWlI 1021 (1096)
T TIGR00927 942 IMWIAMFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPVPWLL 1021 (1096)
T ss_pred HHHHHHHHHHHHHHHHHhhhhcCCChhhhhhhhhhhhcccHHHHHHHHHHHccCCcceeeeccccchheeeeeccHHHHH
Confidence 33334456778899999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred h----cCceeEecchhHHHHHHHHHHHHHHHH--HHHhCCcccHHHHHHHHHHHHHHHHHHHH
Q psy11346 108 C----RSQKIRLDYWPLTRDSIIYMVAVLILA--FSLQDGKVMWYEALSMVFFYYFYIIEKAK 164 (219)
Q Consensus 108 ~----~~~~~~~~~~~~~~d~~~~~~~~~~l~--~~~~~g~is~~~gi~Ll~~Y~~yl~~~~~ 164 (219)
. +..++.+++..+.....+++..+++++ +.+.+.+++|..|++|+++|++|+++.+-
T Consensus 1022 ~~li~g~~pV~V~S~GL~~sI~LLF~~LlflissI~l~kwrL~R~lGivlLvlYvvFLV~aiL 1084 (1096)
T TIGR00927 1022 FSLINGLQPVPVSSNGLFCAIVLLFLMLLFVISSIASCKWRMNKILGFTMFLLYFVFLIISVM 1084 (1096)
T ss_pred HHHhccCcceeecCccHHHHHHHHHHHHHHHHHHHHhcceEEechHHHHHHHHHHHHHHHHHH
Confidence 3 234667777666544444333333222 23456799999999999999999998764
No 18
>TIGR00378 cax calcium/proton exchanger (cax).
Probab=99.76 E-value=1e-17 Score=151.00 Aligned_cols=133 Identities=19% Similarity=0.325 Sum_probs=113.7
Q ss_pred HHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHHHH
Q psy11346 26 IFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCI 105 (219)
Q Consensus 26 lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl~~ 105 (219)
....+...++++++++++.+++++|+|+.+.|++++|++||+||+++++.++++|+.|+++|+++|||++|.+++++...
T Consensus 212 ~~~v~i~~~a~~lv~~~~~~~~~~gi~~~~igl~iva~~tslpE~~~ai~aa~~~~~~~ai~~~~GS~i~~~l~v~p~lv 291 (349)
T TIGR00378 212 GTTVIVAFCSEFLVGTIDNVVESTGLSKLFIGVIVIPIVGNAAEHATAVLVAMKDKMDLALGVAIGSSLQIALFVAPVLV 291 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcccHHHHHHHHHHHcCCcccHHHHHHhHHHHHHHHHHHHHH
Confidence 34456667899999999999999999999999999999999999999999999999999999999999999999999866
Q ss_pred HHh--cCceeEecchhHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHH
Q psy11346 106 LLC--RSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYII 160 (219)
Q Consensus 106 ~~~--~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g~is~~~gi~Ll~~Y~~yl~ 160 (219)
++. .++|+.+.-+ ..|...+.++.+++.....||+.+|.||.++++.|+++-.
T Consensus 292 l~~~~~~~~~~L~f~--~~~~~~l~~~v~~~~~~~~dg~~n~leG~~ll~~Y~i~~~ 346 (349)
T TIGR00378 292 IVGWMIDVPMTLNFS--TFELVALFIAVLLSNYISLDGESNWLEGVMLLAMYIIIAM 346 (349)
T ss_pred HHHHHhCCCceecCc--HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence 552 3556655543 3666666666666667788999999999999999998743
No 19
>KOG1307|consensus
Probab=99.73 E-value=6.3e-18 Score=153.62 Aligned_cols=129 Identities=22% Similarity=0.383 Sum_probs=113.7
Q ss_pred hhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHHHHHHhc-----
Q psy11346 35 DAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCR----- 109 (219)
Q Consensus 35 s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl~~~~~~----- 109 (219)
|+.++..++.+++.+|||+.++|+|++|.|||.||+++|++.+|+|..|+|+++-+|||+|.+++.+|+.++++.
T Consensus 440 SYLMVWwa~~iGeT~gIp~eIMGLTiLAAGTSIPDlitSvIVARKGlGDMAVSsSiGSNiFDI~VGLplPWLL~~lI~~~ 519 (588)
T KOG1307|consen 440 SYLMVWWANIIGETLGIPDEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSIGSNIFDILVGLPLPWLLYTLIYGF 519 (588)
T ss_pred HHHHHHHHHHcccccCCCHHHhhhhhhhcCCchHHhhHhhhhcccccccceeecccccchhheeecCCcHHHHHHHHhhc
Confidence 788999999999999999999999999999999999999999999999999999999999999999999998862
Q ss_pred CceeEecchhHHHHHHHHHHHHHH--HHHHHhCCcccHHHHHHHHHHHHHHHHHHH
Q psy11346 110 SQKIRLDYWPLTRDSIIYMVAVLI--LAFSLQDGKVMWYEALSMVFFYYFYIIEKA 163 (219)
Q Consensus 110 ~~~~~~~~~~~~~d~~~~~~~~~~--l~~~~~~g~is~~~gi~Ll~~Y~~yl~~~~ 163 (219)
+.++.++++.+.....++.+.+++ +.+.+.+++....-|+.|+++|.+|+.+.+
T Consensus 520 ~~~i~vsS~GL~csi~lLf~ml~v~v~~ia~~rWrMnK~lG~~m~llY~~Fl~~sv 575 (588)
T KOG1307|consen 520 KSKISVSSNGLVCSIGLLFAMLIVLVLGIALSRWRMNKILGFLMILLYFVFLIISV 575 (588)
T ss_pred CCceeecCCceehHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHhhh
Confidence 334888888777777666555443 345667899999999999999999998865
No 20
>TIGR00845 caca sodium/calcium exchanger 1. This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family
Probab=99.70 E-value=2.6e-16 Score=154.43 Aligned_cols=130 Identities=17% Similarity=0.265 Sum_probs=105.1
Q ss_pred hhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCC-CceeehhhhhhhHHHHhhHhHHHHHHh-----
Q psy11346 35 DAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITE-GDVGTGTVVGSGVFNMLAVPALCILLC----- 108 (219)
Q Consensus 35 s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~-~~iaig~iiGS~lfn~llv~gl~~~~~----- 108 (219)
...+++.+..++..+|+++.++|+|++|+|||+||++++++++++++ .|+++||++|||+||+++++|+++++.
T Consensus 770 ~~~i~~~a~~ig~~~gi~~~viGlt~vA~GTSlPEl~~S~~aA~~~~~~d~aigNv~GSNifNi~l~lGv~~~i~~~~~~ 849 (928)
T TIGR00845 770 TAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYHA 849 (928)
T ss_pred HHHHHHHHHHHHHHcCCCHHhhhheeeeEecCcHHHHHHHHHHHcCCCCceeEEeecchHHHHHHHHHHHHHHHhhhhhc
Confidence 55688899999999999999999999999999999999999999865 999999999999999999999999983
Q ss_pred -cCceeEecchhHHHHHHHHHHHHHHHHH-HHh-C-----C------cccHHHHHHHHHHHHHHHHHHHH
Q psy11346 109 -RSQKIRLDYWPLTRDSIIYMVAVLILAF-SLQ-D-----G------KVMWYEALSMVFFYYFYIIEKAK 164 (219)
Q Consensus 109 -~~~~~~~~~~~~~~d~~~~~~~~~~l~~-~~~-~-----g------~is~~~gi~Ll~~Y~~yl~~~~~ 164 (219)
.+.++.++...+.++..+++...++++. +++ + | .-.+..+.+++.++++|+++..-
T Consensus 850 ~~~~~~~V~~~~l~~~v~l~~~~a~l~~~vl~~rr~~~~g~elggp~~~~~~~~~~~~~lw~~y~~~s~l 919 (928)
T TIGR00845 850 ANGTQFKVSPGTLAFSVTLFTIFAFICIGVLLYRRRPEIGGELGGPRTAKLLTSALFVLLWLLYILFSSL 919 (928)
T ss_pred ccCceEEECccchhHHHHHHHHHHHHHHHHHHHhhcccccceeCCCCCcchhhhHHHHHHHHHHHHHHHH
Confidence 1347788877778887766544443332 222 2 1 23457788899999999887653
No 21
>PLN03151 cation/calcium exchanger; Provisional
Probab=99.50 E-value=6.8e-13 Score=127.75 Aligned_cols=140 Identities=12% Similarity=0.129 Sum_probs=107.7
Q ss_pred HHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCC--ceeehhhhhhhHHHHhhHhHH
Q psy11346 26 IFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEG--DVGTGTVVGSGVFNMLAVPAL 103 (219)
Q Consensus 26 lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~--~iaig~iiGS~lfn~llv~gl 103 (219)
+.+..+..++..++..++.++..+|+|++++|+|++|+|||+||+++++.-+++|.+ .+|+++++|+++||+++.+|+
T Consensus 491 ~Si~wi~~~a~elv~~l~~iG~i~~is~~~lglTvlA~gnsi~Dlian~~lA~~G~~~m~mA~~a~~ggp~F~il~glG~ 570 (650)
T PLN03151 491 MSIVWFYMIANELVALLVAFGVIFGINPSILGLTVLAWGNSMGDLMSNVALAMNGGDGVQIAMSGCYAGPMFNTLVGLGM 570 (650)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHccHHHHHHHHHHHHcCCchhHHHHHHhhhhhHHHHHHhccH
Confidence 334455556788999999999999999999999999999999999999999999976 578889999999999999999
Q ss_pred HHHHhc--C--ceeEecch-hHHHHHHHHHHHHHHH--HHHHhCCcccHHHHHHHHHHHHHHHHHHHHH
Q psy11346 104 CILLCR--S--QKIRLDYW-PLTRDSIIYMVAVLIL--AFSLQDGKVMWYEALSMVFFYYFYIIEKAKI 165 (219)
Q Consensus 104 ~~~~~~--~--~~~~~~~~-~~~~d~~~~~~~~~~l--~~~~~~g~is~~~gi~Ll~~Y~~yl~~~~~~ 165 (219)
..++.. + .+...... .+.....+++..+++. .....+.+++|..|+.++.+|++|+++..-.
T Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~L~~~li~~~~~~f~~~R~~G~~li~~Y~~Fl~~~~~~ 639 (650)
T PLN03151 571 SMLLGAWSKSPESYMLPEDSSLFYTMGFLVSGLIWALVVLPRNDMRPNKTLGVGLIALYLIFLTFRVST 639 (650)
T ss_pred HHHHHHhhcCCCceeecCCChHHHHHHHHHHHHHHHHHHHHHhCeeechhHHHHHHHHHHHHHHHHHHH
Confidence 998842 1 12333322 2333333333333222 2334678999999999999999999997753
No 22
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=99.45 E-value=2.2e-12 Score=116.53 Aligned_cols=133 Identities=8% Similarity=0.137 Sum_probs=110.1
Q ss_pred HHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHHHHH
Q psy11346 27 FVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCIL 106 (219)
Q Consensus 27 f~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl~~~ 106 (219)
.....+..++++++++|...+.+|+|+.+.|+++..+|| +||.++++.++++|+.|.+++-.+||.+...+++++...+
T Consensus 230 ~lv~Vv~lAe~lv~sIe~~v~~~Glp~afiGvIIaiv~~-apE~~tAV~aA~kNkmq~slnialGSsLq~illtvP~lvl 308 (366)
T PRK10599 230 HLIAVIAVTKMNASPLETLLTSMNAPVAFTGFLVALLIL-SPEGLGALKAVLNNQVQRAMNLFFGSVLATISLTVPVVTL 308 (366)
T ss_pred HHHHHHHHHHHhHhhHHHHHHhcCCCHHHHHHHHHHHHc-chhHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445569999999999999999999999999866666 9999999999999999999999999999999999998887
Q ss_pred Hh--cCceeEecchhHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHH
Q psy11346 107 LC--RSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYIIEK 162 (219)
Q Consensus 107 ~~--~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g~is~~~gi~Ll~~Y~~yl~~~ 162 (219)
+. .++|+.+.-++ .+...+.++.++....+.+||-++.+|..++++|..|+...
T Consensus 309 ig~~~g~pm~L~f~~--~e~vlL~ltv~v~~~t~~dGrsN~LeG~~hL~lf~~y~~l~ 364 (366)
T PRK10599 309 IAFLTGNELQFGLGA--PEMVVMVASLVLCHISFSTGRTNVLNGAAHLALFAAYLMTI 364 (366)
T ss_pred HHHHhCCCeEecCCH--HHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHH
Confidence 74 36788877543 34444444444444556899999999999999999998764
No 23
>KOG2399|consensus
Probab=99.44 E-value=1.8e-12 Score=123.42 Aligned_cols=153 Identities=14% Similarity=0.169 Sum_probs=113.4
Q ss_pred cCCccchhHHHHHHHHHHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceee
Q psy11346 7 NFPFGFVGAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGT 86 (219)
Q Consensus 7 ~~~~~~~~~~~~~~l~~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iai 86 (219)
+-||.+..++..+ .-+.+.++....++.-++.-++.++..+|+|++++|+|++|+|||..|+++++.-+++|.++||.
T Consensus 437 ~~ppk~~~~v~~~--~gF~mSi~wI~~~A~Eiv~vl~~lG~I~~ls~siLGLTv~AWgNSiGDLIAniavak~G~p~MAm 514 (605)
T KOG2399|consen 437 DKPPKFYHWVFSA--LGFLMSIAWIYLIANELVAVLTMLGVIFGLSPSILGLTVLAWGNSIGDLIANIAVAKQGYPRMAM 514 (605)
T ss_pred cCCCchHhHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhccHHHHHHHHHHHHcCcHHHHH
Confidence 4566666544321 12223334445567779999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHhhHhHHHHHHhc--CceeE--ecc-hhHHHHHHHHHHHHHHH--HHHHhCCcccHHHHHHHHHHHHHHH
Q psy11346 87 GTVVGSGVFNMLAVPALCILLCR--SQKIR--LDY-WPLTRDSIIYMVAVLIL--AFSLQDGKVMWYEALSMVFFYYFYI 159 (219)
Q Consensus 87 g~iiGS~lfn~llv~gl~~~~~~--~~~~~--~~~-~~~~~d~~~~~~~~~~l--~~~~~~g~is~~~gi~Ll~~Y~~yl 159 (219)
|.++|+++||+++.+|+..++.. +.+.+ ... ........++.++.+.. ..+..+.++.|..|+.|+.+|+.|.
T Consensus 515 aac~GGplfn~lvg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~fL~i~l~~slv~~~~~~f~~~r~~gi~L~~lyi~f~ 594 (605)
T KOG2399|consen 515 AACIGGPLFNLLVGLGLPLVISSLQGKPGNIVIPEDNSLRITLIFLLIGLLTSLVLIPTNRFRLRRVLGIGLLSLYIAFT 594 (605)
T ss_pred HHHhhhHHHHHHHHhhHHHHHHHHhcCCCceecccCCceehhHHHHHHHHHHHHHHHhcccceeccchhhHHHHHHHHHH
Confidence 99999999999999999988841 23332 211 22222334444444332 3345688999999999999999994
Q ss_pred HH
Q psy11346 160 IE 161 (219)
Q Consensus 160 ~~ 161 (219)
.+
T Consensus 595 ~~ 596 (605)
T KOG2399|consen 595 LI 596 (605)
T ss_pred HH
Confidence 44
No 24
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=99.37 E-value=1.5e-11 Score=110.34 Aligned_cols=130 Identities=13% Similarity=0.168 Sum_probs=101.2
Q ss_pred hhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHHHHHHhcCce-
Q psy11346 34 CDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQK- 112 (219)
Q Consensus 34 ~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl~~~~~~~~~- 112 (219)
.+.+..+..|.++.|.| |.++|+++..+|| +-|++...++.++|++.++.+++.||.+-|+++++|+|.++ ++.+
T Consensus 49 lA~~v~~aaE~lA~~vG--~~~G~Lina~f~~-~iEvil~~~al~~G~~~lvr~Si~gsIm~~~llv~Glslll-Gglr~ 124 (368)
T COG0387 49 LAFSVVRAAEVLAARVG--EPYGSLINALFGN-AIEVILIVAALKSGSPTLVRDSLYGSIMINLLLVVGLSLLL-GGLRH 124 (368)
T ss_pred HHHHHHHHHHHHHHHhC--CchhHHHHHHHHH-HHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHH-cchhh
Confidence 78899999999999888 9999999999999 66999999999999999999999999999999999999999 5422
Q ss_pred --eEecchhHHHHHHHHHHH-HH--HHHHHHh--CC-----cccHHHHHHHHHHHHHHHHHHHHHHH
Q psy11346 113 --IRLDYWPLTRDSIIYMVA-VL--ILAFSLQ--DG-----KVMWYEALSMVFFYYFYIIEKAKIVV 167 (219)
Q Consensus 113 --~~~~~~~~~~d~~~~~~~-~~--~l~~~~~--~g-----~is~~~gi~Ll~~Y~~yl~~~~~~~~ 167 (219)
.+.++.........+..+ .+ ++..++. ++ ..++..+++++++|.++++++.++|+
T Consensus 125 ~~Q~fN~~~a~~~~~~L~~~~~ialv~P~~~~~~~~~~~~~~~s~~~avv~i~~Y~lfL~fql~tH~ 191 (368)
T COG0387 125 KTQPFNPHGAGTYLALLFTAATIALVLPTFFPYTGGGNFSLGQSLFVAVVLIALYGLFLFFQLKTHA 191 (368)
T ss_pred ceeecchhhHHHHHHHHHHHHHHHhhhhhhhcccCCCcchHhHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 233333333333333222 22 2222222 11 46789999999999999999999884
No 25
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=99.30 E-value=6.6e-11 Score=106.26 Aligned_cols=146 Identities=16% Similarity=0.276 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhH
Q psy11346 15 AIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGV 94 (219)
Q Consensus 15 ~~~~~~l~~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~l 94 (219)
|.......++..-..+....+++++.++|...+.+|+++.+.|+++.++...+||..+++.++++|+.|.+.+-.+||.+
T Consensus 217 ~s~~~s~~vLl~~tv~v~~lae~lv~~le~~l~~~g~~~~F~G~iIa~lVgn~~E~~tAi~aA~~~~mqls~nia~Gsal 296 (368)
T COG0387 217 WSVLLSTGVLLIATVLVALLAEILVGSLEAVLESLGAPPAFVGLIIAALVGNAPEHLTALRAALNNRMQLSMNIAMGSAL 296 (368)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhccCHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 44444455555556666778999999999999999999999999999999669999999999999999999999999999
Q ss_pred HHHhhHhHHHHHHh--cCceeEecchhHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHH
Q psy11346 95 FNMLAVPALCILLC--RSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYIIEK 162 (219)
Q Consensus 95 fn~llv~gl~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g~is~~~gi~Ll~~Y~~yl~~~ 162 (219)
...++.++...++. .++|+.+.-. ..|...+..+.++..+...||+-+|.+|..++.+|..|....
T Consensus 297 q~~lltiP~lvlis~~~gqpm~l~~~--~~elV~l~~~v~~~~~~~sdG~sn~leG~~lL~lya~~~~~f 364 (368)
T COG0387 297 QTALLTIPVLVLISLFTGQPLTLGFG--PPELVLLVVTVFLANILFSDGRTNWLEGVVLLALYAIYAMLF 364 (368)
T ss_pred HHHHHHHHHHHHHHHHhCCCccccCC--HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence 99988888766552 3677777644 457777777777777888999999999999999999997643
No 26
>KOG1397|consensus
Probab=99.19 E-value=7.7e-11 Score=105.88 Aligned_cols=135 Identities=21% Similarity=0.320 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhH
Q psy11346 23 TGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPA 102 (219)
Q Consensus 23 ~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~g 102 (219)
++.....+.-.+++|+|+++|...++.++|..+.|++++|+...+.|...+|.-+.+|+.|++.|-.+||.+...+++++
T Consensus 294 ~L~~~T~~vsllaeyLV~~Id~~~ds~~ls~~FiglillpiVgNaaEh~~AI~fA~k~kldLslgVaigsalQI~Lf~vP 373 (441)
T KOG1397|consen 294 WLLIMTLLVSLLAEYLVDTIDDVSDSWGLSVKFIGLILLPIVGNAAEHAGAISFAMKDKLDLSLGVAIGSALQIALFVVP 373 (441)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhheeeeecccCchHHhhcceeeeecCcccchhhhhhhhhHhHHHhhhh
Confidence 33344455566789999999999999999999999999999988999999999999999999999999999999999999
Q ss_pred HHHHHhc--CceeEecchhHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHH
Q psy11346 103 LCILLCR--SQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYI 159 (219)
Q Consensus 103 l~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g~is~~~gi~Ll~~Y~~yl 159 (219)
.+.++.. +.++.++- -..|...+.++.++..+++.+|+-++.+|.+|++.|++-.
T Consensus 374 ~~v~v~W~~g~~M~LnF--~~~et~~l~isVfl~~y~lqdG~Sny~kG~mLll~Y~Iia 430 (441)
T KOG1397|consen 374 FSVIVGWIMGISMDLNF--PLLETACLFISVFLVAYLLQDGKSNYFKGLMLLLCYLIIA 430 (441)
T ss_pred HHHHhhhhcCCceEEec--cHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHH
Confidence 9988853 44444442 2457777778888888899999999999999999997654
No 27
>KOG1306|consensus
Probab=98.99 E-value=8.7e-11 Score=108.12 Aligned_cols=147 Identities=24% Similarity=0.414 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcccHHHHHHHh------------------CCChhhhHHHHHHhcCChhHHHHHHHHHh
Q psy11346 17 IFPTLITGYIFVFLATVCDAYFVPCIDIVCQKL------------------ELSNDVAGATLMASGTSSPELFINLIGTF 78 (219)
Q Consensus 17 ~~~~l~~~~lf~~l~i~~s~~~v~~~~~ia~~l------------------gis~~v~G~tlla~gts~PEl~~si~a~~ 78 (219)
+.|.+.+.|+|+.+.+++++ |.-++|.+++.- -+++++..+|++|+|+|+||+..+++..-
T Consensus 29 ~vYfv~l~Y~F~Gvsiiadr-Fm~sIE~its~~kev~v~k~~g~e~~~~vriWNeTVsnltLmAlGsSaPEIlLSiIe~~ 107 (596)
T KOG1306|consen 29 IVYFVALPYAFLGVSIIADR-FMASIEVITSASREVIVIKPTGEESTTYVRVWNETVSNLTLMALGSSAPEILLSIIEFC 107 (596)
T ss_pred eEEeehhHHHHhhHHHHhhh-heeeeeccccccceeEEEccCCceeEEEEEEechhhHHHHHhhcccCcchhhHHHHHHh
Confidence 55788999999999998876 556778887763 37999999999999999999999999986
Q ss_pred hC---CCceeehhhhhhhHHHHhhHhHHHHHHhcCcee-Eecc-hhHHHHHHHHHHHHHHH---HHHHhCCcccHHHHHH
Q psy11346 79 IT---EGDVGTGTVVGSGVFNMLAVPALCILLCRSQKI-RLDY-WPLTRDSIIYMVAVLIL---AFSLQDGKVMWYEALS 150 (219)
Q Consensus 79 ~g---~~~iaig~iiGS~lfn~llv~gl~~~~~~~~~~-~~~~-~~~~~d~~~~~~~~~~l---~~~~~~g~is~~~gi~ 150 (219)
.+ ..|++.|+++||.+||+..+.++|..+..++.. ++.+ ..+.....+-..+..++ +.++.+|.+..||+++
T Consensus 108 gn~f~agdLGPgTIVGSAAfnlF~iiAVCv~vip~Ge~rki~~lrVf~VtA~ws~fAYiWLyliLsV~sPnvv~vwEall 187 (596)
T KOG1306|consen 108 GNEFQAGDLGPGTIVGSAAFNLFEIIAVCVRVIPAGELRKIFHLRVFFVTADWSIFAYIWLYLILSVFSPNVVYVWEALL 187 (596)
T ss_pred cccccccCcCCceEechhhhhhhhheEEEEEEcCCcccccccCceEEEEEeeHHHHHHHHHhheeEeccCCeeEEeehhh
Confidence 43 468999999999999999999999987432111 1111 01111111111222222 3345789999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy11346 151 MVFFYYFYIIEKAK 164 (219)
Q Consensus 151 Ll~~Y~~yl~~~~~ 164 (219)
.+..|...+...+.
T Consensus 188 T~~ffp~~vv~aya 201 (596)
T KOG1306|consen 188 TLLFFPLVVVSAYA 201 (596)
T ss_pred hHhhhhhhhhHHHH
Confidence 99999998887764
No 28
>KOG1306|consensus
Probab=98.91 E-value=1e-09 Score=101.16 Aligned_cols=149 Identities=17% Similarity=0.237 Sum_probs=106.3
Q ss_pred Cccch-hHHHHHHHHHHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHhhC-CCceee
Q psy11346 9 PFGFV-GAIIFPTLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTFIT-EGDVGT 86 (219)
Q Consensus 9 ~~~~~-~~~~~~~l~~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~~g-~~~iai 86 (219)
|+++. || ..|++.+++.-+.-.+++ +.++..+-..|+.+++..+|++|+|||.||.+.|-+|+.+. -.|-++
T Consensus 421 Pt~~~~Gw-~cFvvsi~~Igl~ta~ig-----d~as~fgC~vglkdsVtA~~~vA~GTS~PDtfASkiAA~~d~~AD~~i 494 (596)
T KOG1306|consen 421 PTEICHGW-ACFVVSILFIGLLTAVIG-----DLASHFGCTVGLKDSVTAVTFVALGTSVPDTFASKIAAEQDQTADASI 494 (596)
T ss_pred chhhcCcc-HHHHHHHHHHHHHHHHHH-----HHHHhhceeecCccceeeeeeehhcCCCcHHHHHHHHHhhcccccccc
Confidence 55555 45 445555554444444444 35677777889999999999999999999999999998754 589999
Q ss_pred hhhhhhhHHHHhhHhHHHHHHh------cCceeEecchhHHHHHHHHHHHHH-HHHHHHhC-----Cc------ccHHHH
Q psy11346 87 GTVVGSGVFNMLAVPALCILLC------RSQKIRLDYWPLTRDSIIYMVAVL-ILAFSLQD-----GK------VMWYEA 148 (219)
Q Consensus 87 g~iiGS~lfn~llv~gl~~~~~------~~~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~-----g~------is~~~g 148 (219)
||+-|||..|.++.+|+.+.+. .|.+++++...+.....++.+..+ .+..+.++ |. -....+
T Consensus 495 gNvTgSNaVNvflGiG~aW~iaavy~a~~g~~f~v~~g~l~FsvtlF~i~s~~~i~vl~~RR~~iggELGGP~~~k~~ta 574 (596)
T KOG1306|consen 495 GNVTGSNAVNVFLGIGLAWSIAAVYWAAQGEPFYVEAGTLAFSVTLFTIFSVVCIVVLVYRRPHIGGELGGPRGWKLLTA 574 (596)
T ss_pred cceecccceeEEEeccHHHHHHHHHHHhcCceEEeccceeeeehHHHHHHHHHhheeeEEeccccCcccCCcchHHHHHH
Confidence 9999999999999999998764 367899887766555544443333 22222221 11 234677
Q ss_pred HHHHHHHHHHHHHHH
Q psy11346 149 LSMVFFYYFYIIEKA 163 (219)
Q Consensus 149 i~Ll~~Y~~yl~~~~ 163 (219)
.+++.++++|+++..
T Consensus 575 ~~fv~lW~~yv~~s~ 589 (596)
T KOG1306|consen 575 ALFVSLWLLYVLLSS 589 (596)
T ss_pred HHHHHHHHHHHHHHH
Confidence 788888888888754
No 29
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=97.90 E-value=0.00018 Score=65.54 Aligned_cols=129 Identities=12% Similarity=0.164 Sum_probs=82.3
Q ss_pred hhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhHHHHHHHHHh---hCCCceeehhhhhhhHHHHhhHhHHHHHHhcC
Q psy11346 34 CDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPELFINLIGTF---ITEGDVGTGTVVGSGVFNMLAVPALCILLCRS 110 (219)
Q Consensus 34 ~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PEl~~si~a~~---~g~~~iaig~iiGS~lfn~llv~gl~~~~~~~ 110 (219)
++---++-+|.+|+|+| |=. |-.++++.--.=|. .-|.+.. ++++.++--+++-..+..+--++|+|+++ +|
T Consensus 53 ~~~~~v~hAe~lA~~~G--eP~-GtliLtlsv~~iEv-~li~~~Ml~g~~~~tlaRDtvfa~vMi~~nGilGl~ll~-GG 127 (366)
T PRK10599 53 SAFSVVRHADVLAHRLG--EPY-GSLILSLSVVILEV-SLISALMATGDAAPTLMRDTLYSIIMIVTGGLVGFSLLL-GG 127 (366)
T ss_pred HHHHHHHHHHHHHHHHC--CCh-HHHHHHHHHHHHHH-HHHHHHHcCCCCCchHHHHHHHHHHHHHhccHHHHHHHH-hc
Confidence 55557889999999999 554 44555554445573 2223332 35788999999999999999999999999 54
Q ss_pred ce---eEecchhHH-HHHHHHHHHHHHHH--HHHhCC----cccHHHHHHHHHHHHHHHHHHHHHHH
Q psy11346 111 QK---IRLDYWPLT-RDSIIYMVAVLILA--FSLQDG----KVMWYEALSMVFFYYFYIIEKAKIVV 167 (219)
Q Consensus 111 ~~---~~~~~~~~~-~d~~~~~~~~~~l~--~~~~~g----~is~~~gi~Ll~~Y~~yl~~~~~~~~ 167 (219)
.+ .+.+..... ....++.++.+.+. .+...+ ..++..+++++++|..|+.++.++|+
T Consensus 128 lr~~eQ~fn~~ga~~~~~~ll~La~l~LvlP~~~~~~~~s~~~s~~~avv~lvlY~~fL~fQl~tHr 194 (366)
T PRK10599 128 RKFATQYMNLFGIKQYLIALFPLAIIVLVFPMALPGANFSTGQALLVALISAAMYGVFLLIQTKTHQ 194 (366)
T ss_pred cccCeeecCHHhHHHHHHHHHHHHHHHHhcCcccCCCccchhHHHHHHHHHHHHHHHHHHHhccchH
Confidence 22 223322121 11222223332222 222223 24678899999999999999998773
No 30
>PRK14585 pgaD putative PGA biosynthesis protein; Provisional
Probab=77.78 E-value=9.5 Score=30.11 Aligned_cols=94 Identities=12% Similarity=0.149 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcc-----cHH--HHHHHHHHHHHHHHHHHHH---HHhhhchhhhhhhhc--ccccCCCC
Q psy11346 121 TRDSIIYMVAVLILAFSLQDGKV-----MWY--EALSMVFFYYFYIIEKAKI---VVTSGYKIYRDEVQF--YNQEDIGK 188 (219)
Q Consensus 121 ~~d~~~~~~~~~~l~~~~~~g~i-----s~~--~gi~Ll~~Y~~yl~~~~~~---~~~~~~~~~r~~~~~--~~~~~~~~ 188 (219)
..|..+..++-+...+++..|-+ .++ ++.--+.+|+.-.++.... =.+|+|+|+|.++++ +..++++-
T Consensus 16 liD~~~T~laW~gf~~~~~~~l~~~l~~p~~~~~~l~tl~~Y~~iAv~nAvvLI~WA~YNq~RF~~~~R~~~~~~~~~eL 95 (137)
T PRK14585 16 LVDYVATTILWTLFALFIFLFAMDLLTGYYWQSEARSRLQFYFLLAVANAVVLIVWALYNKLRFQKQQHHAAYQYTPQEY 95 (137)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCChHHH
Confidence 44666665554433333322211 333 4555666665544333211 135677777666532 22222211
Q ss_pred CCCCCchh---hhccccceeeeeeecCCC
Q psy11346 189 SNPTNKAK---EMEYMGRWSTLAFDTHNQ 214 (219)
Q Consensus 189 ~~~~~~~~---e~~~~~~~~~~~~~~~~~ 214 (219)
+.+-+-++ .+-..++-.+.-.|+|-|
T Consensus 96 A~Sf~is~el~~qL~~~~~lTvh~D~~G~ 124 (137)
T PRK14585 96 AESLAIPDELYQQLQKSHRMSVHFTSQGQ 124 (137)
T ss_pred HHHcCCCHHHHHHHhcCCeEEEEEcCCCC
Confidence 11111122 234557788889999976
No 31
>PF12794 MscS_TM: Mechanosensitive ion channel inner membrane domain 1
Probab=60.19 E-value=1.3e+02 Score=27.07 Aligned_cols=22 Identities=23% Similarity=0.132 Sum_probs=14.1
Q ss_pred hCCCceeehhhhhhhHHHHhhH
Q psy11346 79 ITEGDVGTGTVVGSGVFNMLAV 100 (219)
Q Consensus 79 ~g~~~iaig~iiGS~lfn~llv 100 (219)
...++-...+.+|-..|.++.+
T Consensus 147 ~~~~~~~~~d~LGrl~~ii~~~ 168 (340)
T PF12794_consen 147 ENLPDGLARDVLGRLAFIILLL 168 (340)
T ss_pred ccCchhhhhhhHHHHHHHHHHH
Confidence 3455555677888777766644
No 32
>COG5393 Predicted membrane protein [Function unknown]
Probab=46.14 E-value=1.4e+02 Score=23.16 Aligned_cols=60 Identities=10% Similarity=0.149 Sum_probs=33.1
Q ss_pred hhHHHHhhHhHHHHHHhcCceeEecchhHHHHHHHHHHHHHHHHHHHhCCcccH-HHHHHHHHHHHHHHHHHHHHHH
Q psy11346 92 SGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMW-YEALSMVFFYYFYIIEKAKIVV 167 (219)
Q Consensus 92 S~lfn~llv~gl~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g~is~-~~gi~Ll~~Y~~yl~~~~~~~~ 167 (219)
.|++..++..|+...+ . .+.+.++.++.+...+..... .....+.++|++-.....|..+
T Consensus 45 anll~lllm~gLtl~f-a---------------~~~lmsL~vLvi~~f~~tyRl~a~~a~~~vl~vl~~i~ciW~lr 105 (131)
T COG5393 45 ANLLQLLLMAGLTLLF-A---------------AFGLMSLMVLVIWAFDPTYRLNAMIATTAVLLVLALIGCIWTLR 105 (131)
T ss_pred HHHHHHHHHHHHHHHH-H---------------HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666666555 0 122233333333334444444 4566677888888877777653
No 33
>PF13038 DUF3899: Domain of unknown function (DUF3899)
Probab=44.21 E-value=19 Score=25.87 Aligned_cols=11 Identities=36% Similarity=0.694 Sum_probs=5.9
Q ss_pred hhhhcccccee
Q psy11346 195 AKEMEYMGRWS 205 (219)
Q Consensus 195 ~~e~~~~~~~~ 205 (219)
.++....++|.
T Consensus 62 ~~~~~~~~~~~ 72 (92)
T PF13038_consen 62 KKEKYRVSRWT 72 (92)
T ss_pred HHhhhHhHHHH
Confidence 34456666653
No 34
>COG2245 Predicted membrane protein [Function unknown]
Probab=39.82 E-value=88 Score=25.80 Aligned_cols=46 Identities=13% Similarity=0.047 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcC
Q psy11346 20 TLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGT 65 (219)
Q Consensus 20 ~l~~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gt 65 (219)
.++-...++.+.++++.+..++.|.+++++|.+..=...++-=+|+
T Consensus 102 ~Lag~Vi~wIl~Iisayf~kkaleala~~tgv~~F~~agl~Y~iGa 147 (182)
T COG2245 102 FLAGFVILWILYIISAYFQKKALEALAQYTGVDLFRTAGLLYFIGA 147 (182)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccHHhhhhHHHHHHH
Confidence 3555566778888999999999999999999876544444443443
No 35
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=35.40 E-value=1.4e+02 Score=22.97 Aligned_cols=24 Identities=17% Similarity=0.045 Sum_probs=17.5
Q ss_pred CcccHHHHHHHHHHHHHHHHHHHH
Q psy11346 141 GKVMWYEALSMVFFYYFYIIEKAK 164 (219)
Q Consensus 141 g~is~~~gi~Ll~~Y~~yl~~~~~ 164 (219)
+-++...|..++..=++|+.....
T Consensus 85 ~~~~~i~g~~~~~~G~~~i~l~~~ 108 (136)
T PF08507_consen 85 SILSIIIGLLLFLVGVIYIILGFF 108 (136)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566778888888777777776553
No 36
>PF06195 DUF996: Protein of unknown function (DUF996); InterPro: IPR010397 This is a family of uncharacterised bacterial and archaeal proteins.
Probab=35.00 E-value=1.5e+02 Score=23.27 Aligned_cols=46 Identities=13% Similarity=0.085 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHhhhhhcccHHHHHHHhCCChhhhHHHHHHhcC
Q psy11346 20 TLITGYIFVFLATVCDAYFVPCIDIVCQKLELSNDVAGATLMASGT 65 (219)
Q Consensus 20 ~l~~~~lf~~l~i~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gt 65 (219)
.+..+..++.+.+.++.++-++.+.+++++|.+..=-+.++.=+|.
T Consensus 77 ~l~~~vi~~v~~Iisa~f~kks~~~l~~~tg~~~F~tag~ly~iGA 122 (139)
T PF06195_consen 77 FLAGLVILWVLFIISAYFLKKSYDLLAEYTGVDLFKTAGLLYFIGA 122 (139)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHH
Confidence 3444455667788899999999999999999887766666655554
No 37
>PF13593 DUF4137: SBF-like CPA transporter family (DUF4137)
Probab=34.56 E-value=3.3e+02 Score=24.16 Aligned_cols=74 Identities=15% Similarity=0.133 Sum_probs=42.8
Q ss_pred ChhhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHHHHHHhcCceeEecchhHHHHHH
Q psy11346 52 SNDVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSI 125 (219)
Q Consensus 52 s~~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl~~~~~~~~~~~~~~~~~~~d~~ 125 (219)
.+...|+.++++--+.=.-.+.......|+...++-+...||+.-.++...+..++.++....++......+..
T Consensus 91 ~~l~~Gl~~~~~lPtTv~S~v~~T~~AgGN~a~Al~~~~~snllgv~ltP~ll~l~l~~~~~~~~~~~~~~~L~ 164 (313)
T PF13593_consen 91 PELALGLLILACLPTTVSSSVVLTRLAGGNVALALFNAVLSNLLGVFLTPLLLLLLLGGSSVSIDYASVLIKLV 164 (313)
T ss_pred HHHHHHHHHHhhCCchhhHHHHHHHHcCCCHHHHHHHHHHHhhhhHhHHHHHHHHHhcCCcCCCCHHHHHHHHH
Confidence 34567777665533221222223334467888888888888888888777766666334445544433333433
No 38
>COG4818 Predicted membrane protein [Function unknown]
Probab=32.68 E-value=2.1e+02 Score=21.35 Aligned_cols=20 Identities=20% Similarity=0.286 Sum_probs=15.6
Q ss_pred hhhhhhHHHHhhHhHHHHHH
Q psy11346 88 TVVGSGVFNMLAVPALCILL 107 (219)
Q Consensus 88 ~iiGS~lfn~llv~gl~~~~ 107 (219)
|+.|.--.-+..+.|+.+++
T Consensus 4 NiegaLCY~lgwitGllFll 23 (105)
T COG4818 4 NIEGALCYLLGWITGLLFLL 23 (105)
T ss_pred hhhhHHHHHHHHHHHHHHHH
Confidence 56677777788888988887
No 39
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=31.49 E-value=90 Score=28.60 Aligned_cols=37 Identities=16% Similarity=0.206 Sum_probs=32.2
Q ss_pred HhhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChhH
Q psy11346 33 VCDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSPE 69 (219)
Q Consensus 33 ~~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~PE 69 (219)
+--++|-+-++.+++++|+|+.-..-.+.+++|+.|=
T Consensus 255 ~i~k~f~kpl~~lG~~lgin~~s~aGllaslAn~I~m 291 (354)
T PF04346_consen 255 LITKVFKKPLEKLGKKLGINEVSAAGLLASLANNIPM 291 (354)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 3457888999999999999999998899999998863
No 40
>PRK10921 twin-arginine protein translocation system subunit TatC; Provisional
Probab=31.13 E-value=1.1e+02 Score=26.69 Aligned_cols=19 Identities=11% Similarity=0.051 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy11346 145 WYEALSMVFFYYFYIIEKA 163 (219)
Q Consensus 145 ~~~gi~Ll~~Y~~yl~~~~ 163 (219)
-..++-|+++|-+.+.+..
T Consensus 216 ~llaiPl~lLYEisI~i~~ 234 (258)
T PRK10921 216 TLLAIPMYCLFEIGVFFSR 234 (258)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3556666777766655433
No 41
>PF01708 Gemini_mov: Geminivirus putative movement protein ; InterPro: IPR002621 This family consists of putative movement proteins from Maize streak virus and Wheat dwarf virus [].; GO: 0046740 spread of virus in host, cell to cell, 0016021 integral to membrane
Probab=31.11 E-value=79 Score=23.19 Aligned_cols=15 Identities=13% Similarity=0.155 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHH
Q psy11346 149 LSMVFFYYFYIIEKA 163 (219)
Q Consensus 149 i~Ll~~Y~~yl~~~~ 163 (219)
+...++|++|.++..
T Consensus 46 vaVg~~YL~y~~fLk 60 (91)
T PF01708_consen 46 VAVGCLYLAYTWFLK 60 (91)
T ss_pred HHHHHHHHHHHHHHH
Confidence 345567788877643
No 42
>PRK14584 hmsS hemin storage system protein; Provisional
Probab=30.56 E-value=1.6e+02 Score=23.74 Aligned_cols=18 Identities=28% Similarity=0.176 Sum_probs=11.5
Q ss_pred hhccccceeeeeeecCCC
Q psy11346 197 EMEYMGRWSTLAFDTHNQ 214 (219)
Q Consensus 197 e~~~~~~~~~~~~~~~~~ 214 (219)
++-..++-.+.-+|+|.+
T Consensus 116 ~qLr~~kiltVh~De~G~ 133 (153)
T PRK14584 116 AQLKSGSCLTLYNDEHGH 133 (153)
T ss_pred HHHHhCCeEEEEECCCCC
Confidence 334455666778888854
No 43
>PRK15086 ethanolamine utilization protein EutH; Provisional
Probab=30.27 E-value=86 Score=28.88 Aligned_cols=35 Identities=14% Similarity=0.122 Sum_probs=30.3
Q ss_pred hhhhhcccHHHHHHHhCCChhhhHHHHHHhcCChh
Q psy11346 34 CDAYFVPCIDIVCQKLELSNDVAGATLMASGTSSP 68 (219)
Q Consensus 34 ~s~~~v~~~~~ia~~lgis~~v~G~tlla~gts~P 68 (219)
--++|-.-++.+++++|+|+.-..-.+..++|+.|
T Consensus 258 i~k~f~kpl~~~G~~lgin~~s~aGli~sLAn~I~ 292 (372)
T PRK15086 258 ITKVFKKPLMKVGKLLGMNEVAAAGMVATLANNIP 292 (372)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 35678888999999999999988888999999775
No 44
>TIGR00911 2A0308 L-type amino acid transporter.
Probab=29.70 E-value=3.1e+02 Score=25.63 Aligned_cols=28 Identities=11% Similarity=-0.124 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhchhhhhhhh
Q psy11346 151 MVFFYYFYIIEKAKIVVTSGYKIYRDEVQ 179 (219)
Q Consensus 151 Ll~~Y~~yl~~~~~~~~~~~~~~~r~~~~ 179 (219)
+++..++|....++ ++++.|..++.+++
T Consensus 459 ~~~g~~~y~~~~~~-~~~~~~~~~~~~~~ 486 (501)
T TIGR00911 459 MLTGVPVYFFGVWW-QNKPKWFRYLIVSK 486 (501)
T ss_pred HHHHHHHHHHHHHH-HhccHhhcccccee
Confidence 33334444432222 33344555544443
No 45
>PF04277 OAD_gamma: Oxaloacetate decarboxylase, gamma chain ; InterPro: IPR005899 This family comprises distantly related, low complexity, hydrophobic small subunits of several related sodium ion-pumping decarboxylases. These include oxaloacetate decarboxylase gamma subunit and methylmalonyl-CoA decarboxylase delta subunit [].; GO: 0008948 oxaloacetate decarboxylase activity, 0015081 sodium ion transmembrane transporter activity, 0071436 sodium ion export, 0016020 membrane
Probab=28.84 E-value=1.5e+02 Score=20.36 Aligned_cols=14 Identities=0% Similarity=0.278 Sum_probs=5.9
Q ss_pred HHHHHHHHHHHHHH
Q psy11346 148 ALSMVFFYYFYIIE 161 (219)
Q Consensus 148 gi~Ll~~Y~~yl~~ 161 (219)
+++++++.++++++
T Consensus 13 ~iVF~~L~lL~~~i 26 (79)
T PF04277_consen 13 GIVFLVLILLILVI 26 (79)
T ss_pred HHHHHHHHHHHHHH
Confidence 34444444444443
No 46
>COG0385 Predicted Na+-dependent transporter [General function prediction only]
Probab=26.92 E-value=3.5e+02 Score=24.46 Aligned_cols=81 Identities=11% Similarity=0.056 Sum_probs=48.4
Q ss_pred CCh-hhhHHHHHHhcCChhHHHHHHHHHhhCCCceeehhhhhhhHHHHhhHhHHHHHHhcCceeEecchhHHHHHHHHHH
Q psy11346 51 LSN-DVAGATLMASGTSSPELFINLIGTFITEGDVGTGTVVGSGVFNMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMV 129 (219)
Q Consensus 51 is~-~v~G~tlla~gts~PEl~~si~a~~~g~~~iaig~iiGS~lfn~llv~gl~~~~~~~~~~~~~~~~~~~d~~~~~~ 129 (219)
+++ ...|+++++..-+-+-- ..+....+|+...++....=|++.-.++..-+..++ .++...++.+....+.....+
T Consensus 94 l~~~l~~Gl~ll~~~Pggv~S-~~~t~lAkGnValsV~~tsvStll~~f~tPllv~l~-~~~~v~~~~~~m~~~i~~~vl 171 (319)
T COG0385 94 LPPELAVGLLLLGCCPGGVAS-NAMTYLAKGNVALSVCSTSVSTLLGPFLTPLLVGLL-AGGGVPVDVGGMFLSILLQVL 171 (319)
T ss_pred CCHHHHHhHHheeeCCCchhH-HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCCCchHHHHHHHHHHHH
Confidence 444 45677776554443333 334445688888888888778777777666666666 335566665555555555544
Q ss_pred HHHH
Q psy11346 130 AVLI 133 (219)
Q Consensus 130 ~~~~ 133 (219)
..+.
T Consensus 172 lP~~ 175 (319)
T COG0385 172 LPFV 175 (319)
T ss_pred HHHH
Confidence 4433
No 47
>COG4736 CcoQ Cbb3-type cytochrome oxidase, subunit 3 [Posttranslational modification, protein turnover, chaperones]
Probab=26.86 E-value=1.1e+02 Score=20.77 Aligned_cols=20 Identities=10% Similarity=0.256 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy11346 145 WYEALSMVFFYYFYIIEKAK 164 (219)
Q Consensus 145 ~~~gi~Ll~~Y~~yl~~~~~ 164 (219)
-|--+.+.++|++++.+.++
T Consensus 12 a~~t~~~~l~fiavi~~ayr 31 (60)
T COG4736 12 AWGTIAFTLFFIAVIYFAYR 31 (60)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 34445566666777777665
No 48
>PF15102 TMEM154: TMEM154 protein family
Probab=25.65 E-value=49 Score=26.46 Aligned_cols=18 Identities=28% Similarity=0.608 Sum_probs=12.9
Q ss_pred CCCCCCchhhhcccccee
Q psy11346 188 KSNPTNKAKEMEYMGRWS 205 (219)
Q Consensus 188 ~~~~~~~~~e~~~~~~~~ 205 (219)
++.|+.-+.||+...+|=
T Consensus 117 edtpsvmeiEmeeldkwm 134 (146)
T PF15102_consen 117 EDTPSVMEIEMEELDKWM 134 (146)
T ss_pred cCCcchhhhhHHHHHhHH
Confidence 445555678999988883
No 49
>KOG3142|consensus
Probab=24.80 E-value=2.6e+02 Score=23.30 Aligned_cols=50 Identities=4% Similarity=-0.088 Sum_probs=21.5
Q ss_pred CceeEecchhHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHH
Q psy11346 110 SQKIRLDYWPLTRDSIIYMVAVLILAFSLQDGKVMWYEALSMVFFYYFYI 159 (219)
Q Consensus 110 ~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~g~is~~~gi~Ll~~Y~~yl 159 (219)
+.|+.+..+.+........+..+.+..++..+..+.....++.++-++..
T Consensus 110 d~pLvlfgr~i~d~~~l~~L~~~ti~~lflt~~~~~l~~~l~~g~~vv~~ 159 (187)
T KOG3142|consen 110 DEPLVLFGRQISDREVLIGLVLITIPVLFLTSAGSNLLWALGAGLVVVLI 159 (187)
T ss_pred CCCeEEeeEEecCcchhhhHHHHHHHHHHHhhHHHHHHHHHHHhHHHHHh
Confidence 34665544444333333333333334444444444444444444444443
No 50
>KOG3814|consensus
Probab=23.73 E-value=4.8e+02 Score=24.57 Aligned_cols=68 Identities=13% Similarity=0.271 Sum_probs=38.4
Q ss_pred HHhhHhHHHHHHhcCceeEecchhHHHHHHHHHHHHHHHHH----HH---------hCCcccHHHHHHHHHHHHHHHHHH
Q psy11346 96 NMLAVPALCILLCRSQKIRLDYWPLTRDSIIYMVAVLILAF----SL---------QDGKVMWYEALSMVFFYYFYIIEK 162 (219)
Q Consensus 96 n~llv~gl~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~----~~---------~~g~is~~~gi~Ll~~Y~~yl~~~ 162 (219)
.+++++|+-+++.....-.+++-.+.|..+++++.+++..+ .. +.+.+++..+++=-++|+=|+.+.
T Consensus 165 ll~L~ig~walf~Rk~~A~mPRvf~~RAlll~LV~~~~fayWLFYiVri~~~r~~nYk~iV~yatslvDaLLfiHYlaVV 244 (531)
T KOG3814|consen 165 LLILLIGIWALFFRKAMADMPRVFVVRALLLVLVFLIVFAYWLFYIVRILDERYRNYKGIVQYATSLVDALLFIHYLAVV 244 (531)
T ss_pred HHHHHHHHHHHHhhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556777777744444567766667766655544443322 21 123456666666666666666554
Q ss_pred H
Q psy11346 163 A 163 (219)
Q Consensus 163 ~ 163 (219)
+
T Consensus 245 L 245 (531)
T KOG3814|consen 245 L 245 (531)
T ss_pred H
Confidence 3
No 51
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=22.66 E-value=84 Score=24.30 Aligned_cols=13 Identities=8% Similarity=0.163 Sum_probs=5.8
Q ss_pred HHHHHHHHHHHHH
Q psy11346 147 EALSMVFFYYFYI 159 (219)
Q Consensus 147 ~gi~Ll~~Y~~yl 159 (219)
.|++++.+++.|+
T Consensus 75 aGvIg~Illi~y~ 87 (122)
T PF01102_consen 75 AGVIGIILLISYC 87 (122)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3444444444443
No 52
>PRK14750 kdpF potassium-transporting ATPase subunit F; Provisional
Probab=22.23 E-value=1.6e+02 Score=16.92 Aligned_cols=20 Identities=10% Similarity=0.074 Sum_probs=13.6
Q ss_pred cHHHHHHHHHHHHHHHHHHH
Q psy11346 144 MWYEALSMVFFYYFYIIEKA 163 (219)
Q Consensus 144 s~~~gi~Ll~~Y~~yl~~~~ 163 (219)
+...|.+++++-+.|+++..
T Consensus 4 ~vi~g~llv~lLl~YLvYAL 23 (29)
T PRK14750 4 SIVCGALLVLLLLGYLVYAL 23 (29)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44567777777777777755
No 53
>PF05434 Tmemb_9: TMEM9; InterPro: IPR008853 This family contains several eukaryotic transmembrane proteins which are homologous to Homo sapiens transmembrane protein 9 Q9P0T7 from SWISSPROT. The TMEM9 gene encodes a 183 amino-acid protein that contains an N-terminal signal peptide, a single transmembrane region, three potential N-glycosylation sites and three conserved cys-rich domains in the N terminus, but no known functional domains. The protein is highly conserved between species from Caenorhabditis elegans to H. sapiens and belongs to a novel family of transmembrane proteins. The exact function of TMEM9 is unknown although it has been found to be widely expressed and localised to the late endosomes and lysosomes []. Members of this family contain CXCXC repeats IPR004153 from INTERPRO in their N-terminal region.; GO: 0016021 integral to membrane
Probab=22.05 E-value=1.3e+02 Score=24.10 Aligned_cols=17 Identities=6% Similarity=0.405 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy11346 146 YEALSMVFFYYFYIIEK 162 (219)
Q Consensus 146 ~~gi~Ll~~Y~~yl~~~ 162 (219)
..=+.+|++|.+|+.+.
T Consensus 62 l~Vi~lLvlYM~fL~~l 78 (149)
T PF05434_consen 62 LWVIGLLVLYMLFLMCL 78 (149)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33456677888887664
No 54
>PRK01637 hypothetical protein; Reviewed
Probab=21.37 E-value=5.4e+02 Score=22.26 Aligned_cols=21 Identities=24% Similarity=0.276 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHHhhhchhhh
Q psy11346 155 YYFYIIEKAKIVVTSGYKIYR 175 (219)
Q Consensus 155 Y~~yl~~~~~~~~~~~~~~~r 175 (219)
|....++....+.+..+.+.|
T Consensus 250 yl~~~ilL~Gaelna~~~~~~ 270 (286)
T PRK01637 250 YLSWCIVLLGAEITATLGEYR 270 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 333334444444443333333
No 55
>PF07136 DUF1385: Protein of unknown function (DUF1385); InterPro: IPR010787 This family contains a number of hypothetical bacterial proteins of unknown function approximately 300 residues in length. Some family members are predicted to be metal-dependent.
Probab=20.31 E-value=3.4e+02 Score=23.45 Aligned_cols=37 Identities=14% Similarity=0.077 Sum_probs=25.6
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhh
Q psy11346 143 VMWYEALSMVFFYYFYIIEKAKIVVTSGYKIYRDEVQ 179 (219)
Q Consensus 143 is~~~gi~Ll~~Y~~yl~~~~~~~~~~~~~~~r~~~~ 179 (219)
.+..||++=+++|+.|+....+......-.+|+.+++
T Consensus 79 ~~l~eG~ir~~if~~Yi~~is~~~dI~Rvf~YHGAEH 115 (236)
T PF07136_consen 79 FNLIEGLIRLAIFLGYIWLISRMKDIKRVFQYHGAEH 115 (236)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHcchhh
Confidence 5679999999999999998876543333334444444
No 56
>cd01776 Rin1_RA Ubiquitin domain of RIN1 RAS effector. Rin1_RA RIN1 is a RAS effector that binds with specificity and high affinity to activated RAS via its carboxy-terminal RA (RAS-associated) domain. RIN1 competes directly with RAF1 for RAS binding and is thought to divert signaling away from RAF and the MAPK pathway while also shunting RAS signals through alternate pathways. In addition, Rin1 and Rin2 are Rab5-binding proteins, binding preferentially to the GTP-bound form, that enhance the GDP-GTP exchange reaction on Rab5 that regulate the docking and fusion processes of endocytic vesicles. In addition to the RA domain, RIN1 and RIN2 have an SH2 (Src homology 2) domain, a proline-rich SH3 domain, and a Vps9 domain.
Probab=20.06 E-value=48 Score=24.03 Aligned_cols=19 Identities=37% Similarity=0.431 Sum_probs=15.7
Q ss_pred cccceeeeeeecCCCcccc
Q psy11346 200 YMGRWSTLAFDTHNQRTTT 218 (219)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~ 218 (219)
.-|.|..++=|+|||+.-+
T Consensus 51 vdg~~~qLadd~~Pq~ika 69 (87)
T cd01776 51 VEETWQQLAPDTYPQRIKA 69 (87)
T ss_pred ECCcEEEcCcccccceech
Confidence 3478999999999998643
Done!